Citrus Sinensis ID: 039565

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------19
Protein Sequence
AYFPNRNKLTGPLLVELIGKQKNNALELGFRGNPELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILEIITGILTVDLSFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGSRITVK
Secondary Structure (PSIPRED)
ccccccccccccEEEEEEcccccccHHHHcccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHcccccccccccHHHHHHHHHcHHccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHcccccHHHHHccccccccHHHHHHHHHHHHHHHHHcccccEEEEcccHcHEEccccccccHcHccHHEEccccccEEEEEEEEEccccccccccccccHHHHHHEEEHHHcccccccccccccccHHHHHHHHHHHHHHccccHcccccHHHHHHHHHHHcccccccc
Coil and Loop (DISEMBL)
ayfpnrnkltgPLLVELIGKQKnnalelgfrgnpelvdqqgkeevccpgleylhqglkhpiiqrdMKSTNILLNEKVQAKLAdfgqsrispveggthmsttiagtagflntelteksdvdsFEIVILEIITGILtvdlsfkgefdIISVEKAVEIAMASVSskvnrrplmNQVVMVReqgsgsritvk
Flexible Loop (DISEMBL)
ayfpnrnkltgplLVELIGKQKNNALELGFRGNPELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILEIITGILTVDLSFKGEFDIISVEKAVEIAMAsvsskvnrrplmnqvvmvreqgsgsritvk
Low Complexity Region (SEG)
AYFPNRNKLTGPLLVELIGKQKNNALELGFRGNPELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILEIITGILTVDLSFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGSRITVK
Disordered region (IsUnstruct)
*********TGPLLVELIGKQKNNALELGFRGNPELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILEIITGILTVDLSFKGEFDIISVEKAVEIAMASV****************************
Disordered Region (DISOPRED)
AYFPNRNKLTGPLLVELIGKQKNNALELGFRGNPELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILEIITGILTVDLSFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQG*G******
Disordered Region (DISEMBL)
AYFPNRNKLTGPLLVELIGKQKNNALELGFRGNPELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILEIITGILTVDLSFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVRE**********
Disordered Region (DISPRO)
**FPNRNKLTGPLLVELIGKQKNNALELGFRGNPELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILEIITGILTVDLSFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGS*******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
AYFPNRNKLTGPLLVELIGKQKNNALELGFRGNPELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILEIITGILTVDLSFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGSRITVK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	188	2.2.26 [Sep-21-2011]
Q9LIG2	899	Receptor-like protein kin	no	no	0.675	0.141	0.465	2e-30
Q9SI06	892	Putative leucine-rich rep	no	no	0.675	0.142	0.465	6e-29
C0LGG3	885	Probable LRR receptor-lik	no	no	0.675	0.143	0.471	9e-29
C0LGG4	890	Probable LRR receptor-lik	no	no	0.707	0.149	0.428	9e-29
C0LGL4	880	Probable LRR receptor-lik	no	no	0.670	0.143	0.468	3e-28
C0LGG6	876	Probable LRR receptor-lik	no	no	0.675	0.144	0.446	7e-28
Q9FZB1	872	Probable LRR receptor-lik	no	no	0.670	0.144	0.443	2e-27
Q9FN93	887	Probable LRR receptor-lik	no	no	0.675	0.143	0.427	1e-26
C0LGQ7	898	Probable LRR receptor-lik	no	no	0.670	0.140	0.462	3e-26
Q9FZB8	871	Probable LRR receptor-lik	no	no	0.675	0.145	0.446	3e-26

>sp|Q9LIG2|RLK6_ARATH Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1

 Score =  132 bits (331), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 74/159 (46%), Positives = 95/159 (59%), Gaps = 32/159 (20%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GLEYLH G K P++ RD+K+TNILLNE + AKLADFG SR  P+EG TH+ST +AGT G+
Sbjct: 701 GLEYLHNGCKPPMVHRDVKTTNILLNEHLHAKLADFGLSRSFPIEGETHVSTVVAGTPGY 760

Query: 109 LNTE------LTEKSDVDSFEIVILEIITGILTV-------------------------- 136
           L+ E      L EKSDV SF IV+LEIIT  L +                          
Sbjct: 761 LDPEYYRTNWLNEKSDVYSFGIVLLEIITNQLVINQSREKPHIAEWVGLMLTKGDIQNIM 820

Query: 137 DLSFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM 175
           D    G++D  SV +AVE+AM+ ++    RRP M+QVV+
Sbjct: 821 DPKLYGDYDSGSVWRAVELAMSCLNPSSARRPTMSQVVI 859

Probable receptor with a dual specificity kinase activity acting on both serine/threonine- and tyrosine-containing substrates.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q9SI06|Y5573_ARATH Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g04300 OS=Arabidopsis thaliana GN=At2g04300 PE=3 SV=2

 Score =  127 bits (318), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 74/159 (46%), Positives = 95/159 (59%), Gaps = 32/159 (20%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GLEYLH G K P++ RD+K+TNILL+E  QAKLADFG SR  P+EG T + T +AGT G+
Sbjct: 691 GLEYLHNGCKPPMVHRDVKTTNILLDEHFQAKLADFGLSRSFPLEGETRVDTVVAGTPGY 750

Query: 109 LNTE------LTEKSDVDSFEIVILEIITG-------------------ILT-------V 136
           L+ E      L EKSDV SF IV+LEIIT                    +LT       +
Sbjct: 751 LDPEYYRTNWLNEKSDVYSFGIVLLEIITNQHVINQSREKPHIAEWVGVMLTKGDIKSII 810

Query: 137 DLSFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM 175
           D  F G++D  SV +AVE+AM+ V+     RP M+QVV+
Sbjct: 811 DPKFSGDYDAGSVWRAVELAMSCVNPSSTGRPTMSQVVI 849

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGG3|Y5182_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1

 Score =  126 bits (316), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 75/159 (47%), Positives = 97/159 (61%), Gaps = 32/159 (20%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GLEYLH G K P++ RD+K+TNILLNE  +AKLADFG SR   +EG TH+ST +AGT G+
Sbjct: 687 GLEYLHNGCKPPMVHRDVKTTNILLNEHFEAKLADFGLSRSFLIEGETHVSTVVAGTPGY 746

Query: 109 LNTE------LTEKSDVDSFEIVILEIITG-------------------ILT-------V 136
           L+ E      LTEKSDV SF I++LEIIT                    +LT       +
Sbjct: 747 LDPEYHRTNWLTEKSDVYSFGILLLEIITNRHVIDQSREKPHIGEWVGVMLTKGDIQSIM 806

Query: 137 DLSFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM 175
           D S   ++D  SV KAVE+AM+ ++    RRP M+QVV+
Sbjct: 807 DPSLNEDYDSGSVWKAVELAMSCLNHSSARRPTMSQVVI 845

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGG4|Y1518_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2

 Score =  126 bits (316), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 75/175 (42%), Positives = 97/175 (55%), Gaps = 42/175 (24%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GLEYLH G + P++ RD+K+TNILLNE+  AKLADFG SR  P++G  H+ST +AGT G+
Sbjct: 692 GLEYLHNGCRPPMVHRDVKTTNILLNERCGAKLADFGLSRSFPIDGECHVSTVVAGTPGY 751

Query: 109 LNTE------LTEKSDVDSFEIVILEIITG-------------------ILT-------V 136
           L+ E      L+EKSDV SF +V+LEI+T                    +LT       V
Sbjct: 752 LDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVIDKTRERPHINDWVGFMLTKGDIKSIV 811

Query: 137 DLSFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM----------VREQGS 181
           D    G++D     K VE+A+A V+   NRRP M  VVM           R QGS
Sbjct: 812 DPKLMGDYDTNGAWKIVELALACVNPSSNRRPTMAHVVMELNDCVALENARRQGS 866

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGL4|Y2289_ARATH Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1

 Score =  124 bits (311), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 74/158 (46%), Positives = 93/158 (58%), Gaps = 32/158 (20%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GLEYLH G K P++ RD+K+TNILL+E  QAKLADFG SR  PV G TH+ST +AGT G+
Sbjct: 682 GLEYLHTGCKPPMVHRDVKTTNILLDEHFQAKLADFGLSRSFPVGGETHVSTAVAGTPGY 741

Query: 109 LNTE------LTEKSDVDSFEIVILEIITG-------------------ILT-------V 136
           L+ E      L EKSDV SF IV+LEIIT                    +LT       V
Sbjct: 742 LDPEYYRTNRLNEKSDVYSFGIVLLEIITSRPVIQQTREKPHIAAWVGYMLTKGDIENVV 801

Query: 137 DLSFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVV 174
           D     +++  SV KA+EIAM+ V+    +RP M+QV 
Sbjct: 802 DPRLNRDYEPTSVWKALEIAMSCVNPSSEKRPTMSQVT 839

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGG6|Y5189_ARATH Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2

 Score =  123 bits (309), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 71/159 (44%), Positives = 93/159 (58%), Gaps = 32/159 (20%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GLEYLH G + P++ RD+K TNILLNE+ QAKLADFG SR  PV+G +H+ T +AGT G+
Sbjct: 678 GLEYLHNGCRPPMVHRDVKPTNILLNERSQAKLADFGLSRSFPVDGESHVMTVVAGTPGY 737

Query: 109 LNTE------LTEKSDVDSFEIVILEIITG-------------------ILT-------V 136
           L+ E      L+EKSDV SF +V+LEI+T                    +LT       V
Sbjct: 738 LDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVMNKNRERPHINEWVMFMLTNGDIKSIV 797

Query: 137 DLSFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM 175
           D     ++D   V K VE+A+A V+   +RRP M  VVM
Sbjct: 798 DPKLNEDYDTNGVWKVVELALACVNPSSSRRPTMPHVVM 836

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FZB1|Y5188_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1

 Score =  122 bits (305), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 70/158 (44%), Positives = 92/158 (58%), Gaps = 32/158 (20%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GLEYLH G   P++ RD+K+TNILLNE+  AKLADFG SR  PV+G +H+ST +AGT G+
Sbjct: 674 GLEYLHNGCTPPMVHRDVKTTNILLNERYGAKLADFGLSRSFPVDGESHVSTVVAGTPGY 733

Query: 109 LNTE------LTEKSDVDSFEIVILEIIT-------------------GILT-------V 136
           L+ E      L+EKSDV SF +V+LEI+T                    +LT       +
Sbjct: 734 LDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVTDKTRERTHINEWVGSMLTKGDIKSIL 793

Query: 137 DLSFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVV 174
           D    G++D     K VE+A+A V+   NRRP M  VV
Sbjct: 794 DPKLMGDYDTNGAWKIVELALACVNPSSNRRPTMAHVV 831

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FN93|Y5596_ARATH Probable LRR receptor-like serine/threonine-protein kinase At5g59680 OS=Arabidopsis thaliana GN=At5g59680 PE=2 SV=1

 Score =  119 bits (299), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 68/159 (42%), Positives = 90/159 (56%), Gaps = 32/159 (20%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GLEYLH G   P++ RD+K+TNILL+E  +AKLADFG SR  PV G +H+ST IAGT G+
Sbjct: 689 GLEYLHIGCTPPMVHRDVKTTNILLDEHYKAKLADFGLSRSFPVGGESHVSTVIAGTPGY 748

Query: 109 LNTE------LTEKSDVDSFEIVILEIITGILTV-------------------------- 136
           L+ E      L+EKSDV SF IV+LE+IT    +                          
Sbjct: 749 LDPEYYHTSRLSEKSDVYSFGIVLLEMITNQAVIDRNRRKSHITQWVGSELNGGDIAKIM 808

Query: 137 DLSFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM 175
           DL   G++D  S  +A+E+AM+       RRP M+ VV+
Sbjct: 809 DLKLNGDYDSRSAWRALELAMSCADPTSARRPTMSHVVI 847

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGQ7|Y4245_ARATH Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1

 Score =  118 bits (295), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/158 (46%), Positives = 91/158 (57%), Gaps = 32/158 (20%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GLEYLH G K P+I RD+KS NILL+   QAKL DFG SR  PV   TH+ST +AG+ G+
Sbjct: 700 GLEYLHIGCKPPMIHRDIKSMNILLDNNFQAKLGDFGLSRSFPVGSETHVSTNVAGSPGY 759

Query: 109 LNTE------LTEKSDVDSFEIVILEIITG-------------------ILT-------V 136
           L+ E      LTEKSDV SF +V+LEIIT                     LT       V
Sbjct: 760 LDPEYYRTNWLTEKSDVFSFGVVLLEIITSQPVIDQTREKSHIGEWVGFKLTNGDIKNIV 819

Query: 137 DLSFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVV 174
           D S  G++D  S+ KA+E+AM+ VS   + RP M+QV 
Sbjct: 820 DPSMNGDYDSSSLWKALELAMSCVSPSSSGRPNMSQVA 857

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FZB8|Y5181_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1

 Score =  117 bits (294), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 71/159 (44%), Positives = 93/159 (58%), Gaps = 32/159 (20%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GLEYLH G K  ++ RD+K+TNILLNE    KLADFG SR  P+EG TH+ST +AGT G+
Sbjct: 686 GLEYLHNGCKPLMVHRDVKTTNILLNEHFDTKLADFGLSRSFPIEGETHVSTVVAGTIGY 745

Query: 109 LNTE------LTEKSDVDSFEIVILEIIT-------------------GILT-------V 136
           L+ E      LTEKSDV SF +V+L +IT                   G+LT        
Sbjct: 746 LDPEYYRTNWLTEKSDVYSFGVVLLVMITNQPVIDQNREKRHIAEWVGGMLTKGDIKSIT 805

Query: 137 DLSFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM 175
           D +  G+++  SV KAVE+AM+ ++     RP M+QVV 
Sbjct: 806 DPNLLGDYNSGSVWKAVELAMSCMNPSSMTRPTMSQVVF 844

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	188
255549708	883	Nodulation receptor kinase precursor, pu	0.675	0.143	0.521	8e-32
147797614	757	hypothetical protein VITISV_023487 [Viti	0.696	0.173	0.496	3e-31
9837280	904	leaf senescence-associated receptor-like	0.675	0.140	0.503	3e-31
255549706	886	BRASSINOSTEROID INSENSITIVE 1-associated	0.760	0.161	0.443	4e-31
255549714	915	BRASSINOSTEROID INSENSITIVE 1-associated	0.670	0.137	0.509	5e-31
255549700	884	BRASSINOSTEROID INSENSITIVE 1-associated	0.675	0.143	0.496	6e-31
297743130	1242	unnamed protein product [Vitis vinifera]	0.664	0.100	0.515	4e-30
356556621	892	PREDICTED: probable LRR receptor-like se	0.670	0.141	0.506	7e-30
255549716	892	Nodulation receptor kinase precursor, pu	0.760	0.160	0.432	9e-30
255549712	884	BRASSINOSTEROID INSENSITIVE 1-associated	0.675	0.143	0.465	2e-29

>gi|255549708|ref|XP_002515905.1| Nodulation receptor kinase precursor, putative [Ricinus communis] gi|223544810|gb|EEF46325.1| Nodulation receptor kinase precursor, putative [Ricinus communis]

 Score =  142 bits (357), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 84/161 (52%), Positives = 98/161 (60%), Gaps = 34/161 (21%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GLEYLH G K PII RD+K TNILLN K QAKLADFG SRI PVEGG+H+ST +AGT G+
Sbjct: 689 GLEYLHNGCKPPIIHRDVKPTNILLNNKFQAKLADFGLSRICPVEGGSHVSTIVAGTPGY 748

Query: 109 LNTE------LTEKSDVDSFEIVILEIIT----------GILT----------------- 135
           L+ E      LTEKSDV SF +V+LEIIT          G  T                 
Sbjct: 749 LDPEYYATNWLTEKSDVFSFGVVLLEIITSGPVISKTRDGDTTHLSQWFSSMVEKGDIQS 808

Query: 136 -VDLSFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM 175
            VD     +FDI S+ K VE+AMA VS+   +RP MNQVV+
Sbjct: 809 IVDPRLGDDFDINSLWKVVELAMACVSATSAQRPTMNQVVI 849

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147797614|emb|CAN65001.1| hypothetical protein VITISV_023487 [Vitis vinifera]

 Score =  140 bits (353), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 81/163 (49%), Positives = 98/163 (60%), Gaps = 32/163 (19%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+YLH G K PII RD+KSTNILLNE+ QAKLADFG SR  P+EG +H+ST + GT G+
Sbjct: 559 GLDYLHDGCKPPIIHRDIKSTNILLNERFQAKLADFGLSRAFPIEGSSHVSTAVVGTPGY 618

Query: 109 LNTE------LTEKSDVDSFEIVILEIITG------------IL--------------TV 136
           L+ E      LTEKSDV S+ +V+LEIIT             I+              TV
Sbjct: 619 LDPEYYVSNRLTEKSDVFSYGVVLLEIITSQPAISKDREKTHIIEWVSCMLANGDIKNTV 678

Query: 137 DLSFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQ 179
           D   +GEFDI S  KAVE+AM  VS     RP M+ VVM  +Q
Sbjct: 679 DPRLQGEFDINSAWKAVEVAMCCVSPTSTERPAMHYVVMELKQ 721

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|9837280|gb|AAG00510.1| leaf senescence-associated receptor-like protein kinase [Phaseolus vulgaris]

 Score =  140 bits (352), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 80/159 (50%), Positives = 97/159 (61%), Gaps = 32/159 (20%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GLEYL  G K PII RD+KS+NILLNE  QAKL+DFG S+I P +G +H+ST +AGT G+
Sbjct: 708 GLEYLQNGCKPPIIHRDVKSSNILLNEHFQAKLSDFGLSKIIPDDGASHLSTVVAGTPGY 767

Query: 109 L------NTELTEKSDVDSFEIVILEIITGILT--------------------------V 136
           L      N  LTEKSDV SF +V+LEIITG L                           V
Sbjct: 768 LDPDYYTNNRLTEKSDVYSFGVVLLEIITGQLVIARNEERSHIIEWVRSLVAIGDIKAIV 827

Query: 137 DLSFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM 175
           D   +G+FDI S  KAVEIAMA VS + N+RP+M+ VV 
Sbjct: 828 DSRLEGDFDINSAWKAVEIAMACVSLRPNQRPIMSVVVF 866

Source: Phaseolus vulgaris

Species: Phaseolus vulgaris

Genus: Phaseolus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255549706|ref|XP_002515904.1| BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis] gi|223544809|gb|EEF46324.1| BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]

 Score =  139 bits (351), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 79/178 (44%), Positives = 107/178 (60%), Gaps = 35/178 (19%)

Query: 33  NPELVDQQGKEEVC---CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI 89
           +P+++  +G+ ++      GLEYLH G K PI+ RD+K+ NILL++K QAKLADFG SR+
Sbjct: 666 HPDILSWEGRLKIALETAQGLEYLHNGCKPPIVHRDVKTANILLDDKFQAKLADFGLSRM 725

Query: 90  SPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT--GILT------ 135
            P EGGTH+ST +AGT G+L+ E      LTEKSDV SF +V+LEIIT   +++      
Sbjct: 726 FPAEGGTHVSTIVAGTPGYLDPEYYVRNWLTEKSDVYSFGVVLLEIITSRSVISQTSEKT 785

Query: 136 ------------------VDLSFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM 175
                             VD    G+FD  +  KA E+AMA VS+    RP M+QVVM
Sbjct: 786 HVSQWVKPMLERGDIKNIVDSRLCGDFDTNTAWKAAELAMACVSATSTERPSMSQVVM 843

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255549714|ref|XP_002515908.1| BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis] gi|223544813|gb|EEF46328.1| BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]

 Score =  139 bits (350), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 81/159 (50%), Positives = 97/159 (61%), Gaps = 33/159 (20%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GLEYLH G K PI+ RD+K+ NILLN++ QA+LADFG S+  PVEGGTH+ST +AGT G+
Sbjct: 706 GLEYLHNGCKPPIVHRDIKTANILLNDQFQARLADFGLSKSFPVEGGTHVSTVVAGTPGY 765

Query: 109 LNTE------LTEKSDVDSFEIVILEIITG--------------------------ILTV 136
           L+ E      LTEKSDV SF +V+L+IITG                          I TV
Sbjct: 766 LDPEYSMTNWLTEKSDVYSFGVVLLKIITGRPVIAVIDERSIHISHWVSSLVANGDIKTV 825

Query: 137 -DLSFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVV 174
            D    G+FDI SV KAVE+AMA  S     RP MNQVV
Sbjct: 826 IDPCLGGDFDINSVWKAVEVAMACTSPTSAGRPTMNQVV 864

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255549700|ref|XP_002515901.1| BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis] gi|223544806|gb|EEF46321.1| BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]

 Score =  139 bits (349), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 79/159 (49%), Positives = 96/159 (60%), Gaps = 32/159 (20%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GLEYLH G K  I+ RD+K+TNILLN+K QAKLADFG SRI PV+G TH+ST +AGT G+
Sbjct: 683 GLEYLHNGCKPQIVHRDVKTTNILLNDKFQAKLADFGLSRIFPVDGSTHISTVVAGTPGY 742

Query: 109 LNTE------LTEKSDVDSFEIVILEIITGILT--------------------------V 136
           L+ E      LT+KSDV SF +V+LEIITG                             V
Sbjct: 743 LDPEYYVNNWLTDKSDVFSFGVVLLEIITGRPAIAQTRERTHISQWVSSMLEKGDIHGIV 802

Query: 137 DLSFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM 175
           D    G+F+I SV KA E+AM  VS+   RRP MNQ V+
Sbjct: 803 DPRLNGDFEINSVWKAAELAMGCVSASSARRPTMNQAVV 841

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297743130|emb|CBI35997.3| unnamed protein product [Vitis vinifera]

 Score =  136 bits (342), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 81/157 (51%), Positives = 94/157 (59%), Gaps = 32/157 (20%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GLEYLH G K PII RD+KSTNILLNEK QAKLADF  SR  P EG TH+ST +AGT G+
Sbjct: 288 GLEYLHNGCKPPIIHRDIKSTNILLNEKFQAKLADFRLSRAFPNEGSTHVSTIVAGTRGY 347

Query: 109 LNTE------LTEKSDVDSFEIVILEIITG-------------------ILT-------V 136
           L+ E      LTEKSDV SF +V+LEIIT                    +L        V
Sbjct: 348 LDPEYHASNRLTEKSDVFSFGVVLLEIITSQSPVPGNHEETHIIQWVSSMLANGDIKNIV 407

Query: 137 DLSFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQV 173
           D   +G+FDI S  KAVE+AM+ V+S    RP MN V
Sbjct: 408 DPRLQGDFDINSAWKAVEVAMSCVASTSTERPAMNYV 444

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356556621|ref|XP_003546622.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g51880-like [Glycine max]

 Score =  135 bits (340), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 80/158 (50%), Positives = 97/158 (61%), Gaps = 32/158 (20%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GLEYL  G K PII RD+KSTNILLNE  QAKL+DFG S+I P +G TH+ST IAGT G+
Sbjct: 694 GLEYLQNGCKPPIIHRDVKSTNILLNEHFQAKLSDFGLSKIIPTDGSTHVSTVIAGTPGY 753

Query: 109 LNTE------LTEKSDVDSFEIVILEIITG--ILT------------------------V 136
           L+ E      LTEKSDV SF +V+LEIIT   ++T                        V
Sbjct: 754 LDPEYYITNRLTEKSDVYSFGVVLLEIITSKPVITKNQEKTHISQWVSSLVAKGDIKSIV 813

Query: 137 DLSFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVV 174
           D   +G+FD  SV KAVEIA A VS   NRRP+++ +V
Sbjct: 814 DSRLEGDFDNNSVWKAVEIAAACVSPNPNRRPIISVIV 851

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255549716|ref|XP_002515909.1| Nodulation receptor kinase precursor, putative [Ricinus communis] gi|223544814|gb|EEF46329.1| Nodulation receptor kinase precursor, putative [Ricinus communis]

 Score =  135 bits (339), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 77/178 (43%), Positives = 106/178 (59%), Gaps = 35/178 (19%)

Query: 33  NPELVDQQGKEEVC---CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI 89
           +P ++  +G+ ++      GL+YLH G K PI+ RD+K+TNILLN++ QAKLADFG SR 
Sbjct: 674 HPSILSWEGRLQIALEAAQGLDYLHNGCKPPIVHRDVKTTNILLNDRFQAKLADFGLSRT 733

Query: 90  SPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT------------ 131
            PVE G+H+ST +AGT G+L+ +      LTEKSDV S+ +V+LEIIT            
Sbjct: 734 FPVEDGSHVSTVVAGTPGYLDPDYYVTNWLTEKSDVYSYGVVLLEIITSRPVIARTRDKT 793

Query: 132 -------GILT-------VDLSFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM 175
                   +L        VD   +G+FD  SV K  E+AMA +S+    RP M+QVVM
Sbjct: 794 HVSQWVKAMLDKGDIKNIVDPRLRGDFDNNSVWKVTELAMACLSTTSGERPSMSQVVM 851

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255549712|ref|XP_002515907.1| BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis] gi|223544812|gb|EEF46327.1| BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]

 Score =  134 bits (337), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 75/161 (46%), Positives = 97/161 (60%), Gaps = 34/161 (21%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GLEYLH G K PI+ RD+K+TNILLN+K QAK++DFG SRI P +GGTH+ST +AGT G+
Sbjct: 683 GLEYLHGGCKLPIVHRDVKTTNILLNDKFQAKISDFGLSRIFPADGGTHVSTIVAGTPGY 742

Query: 109 LNTE------LTEKSDVDSFEIVILEIITGILTV-------------------------- 136
           L+ E      LT+KSDV SF +V+LEIIT    +                          
Sbjct: 743 LDPEYYVTNWLTDKSDVYSFGVVLLEIITCRPVIAQNRNHENSHISQWVSSMIENGDVNS 802

Query: 137 --DLSFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM 175
             D    GE+++ SV K VE+AM  +S+   RRP MNQVV+
Sbjct: 803 IADPRLNGEYEVNSVWKIVELAMECLSTTSARRPTMNQVVI 843

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	188
TAIR|locus:2126540	876	AT4G29990 [Arabidopsis thalian	0.446	0.095	0.588	4e-32
TAIR|locus:2017527	693	AT1G51830 [Arabidopsis thalian	0.473	0.128	0.589	1.9e-31
TAIR|locus:2066133	880	AT2G28960 [Arabidopsis thalian	0.441	0.094	0.629	1.5e-30
TAIR|locus:2017557	894	IOS1 "IMPAIRED OOMYCETE SUSCEP	0.579	0.121	0.504	1.5e-30
TAIR|locus:2824870	884	AT1G51805 [Arabidopsis thalian	0.484	0.102	0.577	8.7e-29
TAIR|locus:2066143	786	AT2G28970 [Arabidopsis thalian	0.441	0.105	0.640	3.1e-28
TAIR|locus:2195825	865	AT1G51850 [Arabidopsis thalian	0.484	0.105	0.608	3.2e-28
TAIR|locus:2028446	888	AT1G49100 [Arabidopsis thalian	0.441	0.093	0.595	1.3e-27
TAIR|locus:2195855	876	AT1G51910 [Arabidopsis thalian	0.473	0.101	0.586	5.1e-27
TAIR|locus:2017647	885	AT1G51820 [Arabidopsis thalian	0.484	0.102	0.587	5.3e-27

TAIR|locus:2126540 AT4G29990 [Arabidopsis thaliana (taxid:3702)]

 Score = 258 (95.9 bits), Expect = 4.0e-32, Sum P(3) = 4.0e-32
 Identities = 53/90 (58%), Positives = 66/90 (73%)

Query:    49 GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
             GLEYLH G K PI+ RD+K  NILLNE +QAK+ADFG SR  PVEG + +ST +AGT G+
Sbjct:   681 GLEYLHYGCKPPIVHRDVKPANILLNENLQAKIADFGLSRSFPVEGSSQVSTVVAGTIGY 740

Query:   109 LNTE------LTEKSDVDSFEIVILEIITG 132
             L+ E      + EKSDV SF +V+LE+ITG
Sbjct:   741 LDPEYYATRQMNEKSDVYSFGVVLLEVITG 770

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2017527 AT1G51830 [Arabidopsis thaliana (taxid:3702)]

 Score = 263 (97.6 bits), Expect = 1.9e-31, Sum P(3) = 1.9e-31
 Identities = 56/95 (58%), Positives = 69/95 (72%)

Query:    49 GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
             GLEYLH G K  ++ RD+K+TNILLNE+  AKLADFG SR  P+EG TH+ST +AGT G+
Sbjct:   495 GLEYLHNGCKPLMVHRDIKTTNILLNEQFDAKLADFGLSRSFPIEGETHVSTAVAGTPGY 554

Query:   109 LNTE------LTEKSDVDSFEIVILEIITGILTVD 137
             L+ E      LTEKSDV SF +V+LEIIT    +D
Sbjct:   555 LDPEYYRTNWLTEKSDVYSFGVVLLEIITNQPVID 589

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2066133 AT2G28960 [Arabidopsis thaliana (taxid:3702)]

 Score = 257 (95.5 bits), Expect = 1.5e-30, Sum P(3) = 1.5e-30
 Identities = 56/89 (62%), Positives = 66/89 (74%)

Query:    49 GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
             GLEYLH G K P++ RD+K+TNILL+E  QAKLADFG SR  PV G TH+ST +AGT G+
Sbjct:   682 GLEYLHTGCKPPMVHRDVKTTNILLDEHFQAKLADFGLSRSFPVGGETHVSTAVAGTPGY 741

Query:   109 LNTE------LTEKSDVDSFEIVILEIIT 131
             L+ E      L EKSDV SF IV+LEIIT
Sbjct:   742 LDPEYYRTNRLNEKSDVYSFGIVLLEIIT 770

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010043 "response to zinc ion" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2017557 IOS1 "IMPAIRED OOMYCETE SUSCEPTIBILITY 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 266 (98.7 bits), Expect = 1.5e-30, Sum P(3) = 1.5e-30
 Identities = 60/119 (50%), Positives = 79/119 (66%)

Query:    29 GFRGNPELVDQQGKEEVCCP---GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFG 85
             G RG P ++  +G+  +      GLEYLH G K  I+ RD+K+TNILLNEK QAKLADFG
Sbjct:   672 GKRG-PSILTWEGRLRIAAESAQGLEYLHNGCKPQIVHRDIKTTNILLNEKFQAKLADFG 730

Query:    86 QSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDL 138
              SR  P+   TH+ST +AGT G+L+ E      LTEKSDV SF +V+LE++T    +D+
Sbjct:   731 LSRSFPLGTETHVSTIVAGTPGYLDPEYYRTNWLTEKSDVFSFGVVLLELVTNQPVIDM 789

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0050832 "defense response to fungus" evidence=IEP;IMP

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006569 "tryptophan catabolic process" evidence=RCA

GO:0006857 "oligopeptide transport" evidence=RCA

GO:0006865 "amino acid transport" evidence=RCA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

TAIR|locus:2824870 AT1G51805 [Arabidopsis thaliana (taxid:3702)]

 Score = 256 (95.2 bits), Expect = 8.7e-29, Sum P(3) = 8.7e-29
 Identities = 56/97 (57%), Positives = 69/97 (71%)

Query:    49 GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
             GLEYLH G K  ++ RD+K+TNILLNE  +AKLADFG SR  P+ G TH+ST +AGT G+
Sbjct:   686 GLEYLHNGCKPLMVHRDVKTTNILLNEHFEAKLADFGLSRSFPIGGETHVSTVVAGTPGY 745

Query:   109 LNTE------LTEKSDVDSFEIVILEIITGILTVDLS 139
             L+ E      LTEKSDV SF IV+LE+IT    +D S
Sbjct:   746 LDPEYYKTNRLTEKSDVYSFGIVLLEMITNRPVIDQS 782

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2066143 AT2G28970 [Arabidopsis thaliana (taxid:3702)]

 Score = 265 (98.3 bits), Expect = 3.1e-28, Sum P(2) = 3.1e-28
 Identities = 57/89 (64%), Positives = 67/89 (75%)

Query:    49 GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
             GLEYLH G K P++ RD+KSTNILL+E+ QAKLADFG SR  P E  TH+ST +AGT G+
Sbjct:   588 GLEYLHTGCKPPMVHRDIKSTNILLDERFQAKLADFGLSRSFPTENETHVSTVVAGTPGY 647

Query:   109 LNTE------LTEKSDVDSFEIVILEIIT 131
             L+ E      LTEKSDV SF IV+LEIIT
Sbjct:   648 LDPEYYQTNWLTEKSDVYSFGIVLLEIIT 676

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2195825 AT1G51850 [Arabidopsis thaliana (taxid:3702)]

 Score = 277 (102.6 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
 Identities = 59/97 (60%), Positives = 71/97 (73%)

Query:    49 GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
             GLEYLH G K P++ RD+K+TNILLNE  QAKLADFG SR  P+EG TH+ST +AGT G+
Sbjct:   667 GLEYLHNGCKPPMVHRDVKTTNILLNEHFQAKLADFGLSRSFPIEGETHVSTVVAGTPGY 726

Query:   109 LNTE------LTEKSDVDSFEIVILEIITGILTVDLS 139
             L+ E      LTEKSDV SF IV+LE+IT    +D S
Sbjct:   727 LDPEYYKTNWLTEKSDVYSFGIVLLELITNRPVIDKS 763

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006857 "oligopeptide transport" evidence=RCA

GO:0006865 "amino acid transport" evidence=RCA

TAIR|locus:2028446 AT1G49100 [Arabidopsis thaliana (taxid:3702)]

 Score = 244 (91.0 bits), Expect = 1.3e-27, Sum P(3) = 1.3e-27
 Identities = 53/89 (59%), Positives = 66/89 (74%)

Query:    49 GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
             GLEYLH+G + PI+ RD+K+ NILL+E  QAKLADFG SR    EG +H+ST +AGT G+
Sbjct:   690 GLEYLHKGCRPPIVHRDVKTANILLDEHFQAKLADFGLSRSFLNEGESHVSTVVAGTIGY 749

Query:   109 LNTE------LTEKSDVDSFEIVILEIIT 131
             L+ E      LTEKSDV SF +V+LEIIT
Sbjct:   750 LDPEYYRTNWLTEKSDVYSFGVVLLEIIT 778

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2195855 AT1G51910 [Arabidopsis thaliana (taxid:3702)]

 Score = 263 (97.6 bits), Expect = 5.1e-27, Sum P(2) = 5.1e-27
 Identities = 54/92 (58%), Positives = 71/92 (77%)

Query:    49 GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
             GLEYLH G + P++ RD+K+TNILLNE  QAKLADFG SR SPV+G +++ST +AGT G+
Sbjct:   682 GLEYLHNGSRPPMVHRDVKTTNILLNELYQAKLADFGLSRSSPVDGESYVSTIVAGTPGY 741

Query:   109 LNTE---LTEKSDVDSFEIVILEIITGILTVD 137
             L+ E   L+EK+DV SF +V+LEIIT    +D
Sbjct:   742 LDPETNLLSEKTDVYSFGVVLLEIITNQPVID 773

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2017647 AT1G51820 [Arabidopsis thaliana (taxid:3702)]

 Score = 263 (97.6 bits), Expect = 5.3e-27, Sum P(2) = 5.3e-27
 Identities = 57/97 (58%), Positives = 70/97 (72%)

Query:    49 GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
             GLEYLH G K P++ RD+K+TNILLNE  +AKLADFG SR   +EG TH+ST +AGT G+
Sbjct:   687 GLEYLHNGCKPPMVHRDVKTTNILLNEHFEAKLADFGLSRSFLIEGETHVSTVVAGTPGY 746

Query:   109 LNTE------LTEKSDVDSFEIVILEIITGILTVDLS 139
             L+ E      LTEKSDV SF I++LEIIT    +D S
Sbjct:   747 LDPEYHRTNWLTEKSDVYSFGILLLEIITNRHVIDQS 783

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	LOW CONFIDENCE prediction!
3rd Layer	2.7.11	0.691

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00034228001 SubName- Full=Chromosome chr9 scaffold_7, whole genome shotgun sequence; (853 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	188
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	3e-15
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-14
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	4e-14
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	2e-13
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	3e-13
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	4e-12
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	2e-11
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	5e-11
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	5e-11
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	1e-10
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	2e-10
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	2e-10
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	3e-10
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	4e-10
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	5e-10
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	6e-10
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	7e-10
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	8e-10
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	8e-10
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	8e-10
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	8e-10
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	9e-10
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	4e-09
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	7e-09
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	9e-09
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	1e-08
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	1e-08
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	1e-08
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	2e-08
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	2e-08
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	5e-08
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	7e-08
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	9e-08
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	1e-07
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	1e-07
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	2e-07
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	2e-07
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	3e-07
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	3e-07
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	3e-07
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	3e-07
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	4e-07
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	5e-07
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	5e-07
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	5e-07
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	5e-07
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	6e-07
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	7e-07
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	1e-06
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	1e-06
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	2e-06
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	2e-06
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	2e-06
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	3e-06
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	3e-06
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	3e-06
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	3e-06
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	3e-06
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	3e-06
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	3e-06
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	3e-06
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	4e-06
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	4e-06
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	4e-06
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	5e-06
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	5e-06
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	5e-06
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	6e-06
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	7e-06
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	7e-06
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	7e-06
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	8e-06
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	8e-06
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	8e-06
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	8e-06
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	8e-06
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	1e-05
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	1e-05
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	1e-05
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	1e-05
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	1e-05
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	1e-05
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	1e-05
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	2e-05
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	2e-05
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	2e-05
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	2e-05
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	2e-05
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	2e-05
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	2e-05
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	2e-05
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	2e-05
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	2e-05
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	2e-05
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	2e-05
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	2e-05
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	3e-05
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	3e-05
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	3e-05
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	4e-05
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	4e-05
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	4e-05
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	4e-05
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	4e-05
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	4e-05
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	4e-05
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	5e-05
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	5e-05
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	5e-05
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	5e-05
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	5e-05
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	6e-05
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	6e-05
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	6e-05
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	6e-05
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	6e-05
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	7e-05
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	7e-05
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	7e-05
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	7e-05
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	7e-05
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	9e-05
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	9e-05
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	1e-04
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	1e-04
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	1e-04
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	1e-04
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	1e-04
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	1e-04
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	1e-04
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	1e-04
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	1e-04
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	1e-04
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	2e-04
PHA03211	461	PHA03211, PHA03211, serine/threonine kinase US3; P	2e-04
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	2e-04
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	2e-04
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	2e-04
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	2e-04
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	2e-04
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	2e-04
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	2e-04
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	2e-04
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	2e-04
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	2e-04
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	2e-04
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	2e-04
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	2e-04
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	3e-04
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	3e-04
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	3e-04
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	3e-04
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	3e-04
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	3e-04
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	4e-04
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	4e-04
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	4e-04
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	4e-04
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	4e-04
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	4e-04
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	4e-04
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	5e-04
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	5e-04
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	6e-04
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	6e-04
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	6e-04
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	6e-04
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	7e-04
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	7e-04
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	8e-04
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	8e-04
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	9e-04
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	0.001
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	0.001
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	0.001
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	0.001
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	0.001
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	0.001
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	0.001
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	0.001
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	0.001
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	0.002
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	0.002
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	0.002
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	0.002
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	0.002
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	0.002
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	0.002
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	0.002
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	0.002
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	0.002
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	0.002
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	0.002
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	0.002
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	0.002
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	0.002
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	0.003
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	0.003
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	0.003
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	0.003
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	0.004
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	0.004
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	0.004
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	0.004
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	0.004
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	0.004
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	0.004

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 71.0 bits (175), Expect = 3e-15
 Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 9/90 (10%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL YLH    + I+ RD+K  NIL++     KLADFG ++          + ++ GT  +
Sbjct: 113 GLAYLHS---NGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYW 169

Query: 109 L------NTELTEKSDVDSFEIVILEIITG 132
           +        E    +D+ S    ++E+ TG
Sbjct: 170 MAPEVIRGEEYGRAADIWSLGCTVIEMATG 199

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 68.4 bits (168), Expect = 2e-14
 Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 16/121 (13%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GLEYLH    + II RD+K  NILL+E    K+ADFG ++       +   TT  GT  +
Sbjct: 110 GLEYLH---SNGIIHRDLKPENILLDENGVVKIADFGLAKKL--LKSSSSLTTFVGTPWY 164

Query: 109 LNTEL-------TEKSDVDSFEIVILEIITGILTVDLSFKGEFDIISVEKAVEIAMASVS 161
           +  E+         K DV S  +++ E++TG       F GE  +  ++    I    + 
Sbjct: 165 MAPEVLLGGNGYGPKVDVWSLGVILYELLTG----KPPFSGENILDQLQLIRRILGPPLE 220

Query: 162 S 162
            
Sbjct: 221 F 221

Length = 260

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 68.0 bits (167), Expect = 4e-14
 Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 14/91 (15%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQS-RISPVEGGTHMSTTIAGTAG 107
           GLEYLH    + II RD+K+ NILL    + KL DFG S ++S     T    T+ GT  
Sbjct: 110 GLEYLH---SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSD----TKARNTMVGTPY 162

Query: 108 FLNTEL------TEKSDVDSFEIVILEIITG 132
           ++  E+        K+D+ S  I  +E+  G
Sbjct: 163 WMAPEVINGKPYDYKADIWSLGITAIELAEG 193

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 66.4 bits (163), Expect = 2e-13
 Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 13/95 (13%)

Query: 44  EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA 103
           ++    LEYLH      I+ RD+K  NILL+E    KLADFG +R           TT  
Sbjct: 105 QILS-ALEYLH---SKGIVHRDLKPENILLDEDGHVKLADFGLARQ---LDPGEKLTTFV 157

Query: 104 GTAGF------LNTELTEKSDVDSFEIVILEIITG 132
           GT  +      L     +  D+ S  +++ E++TG
Sbjct: 158 GTPEYMAPEVLLGKGYGKAVDIWSLGVILYELLTG 192

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 65.0 bits (159), Expect = 3e-13
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 13/89 (14%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKV-QAKLADFGQSRISPVEGGTHMSTTIAGTAG 107
           GLEYLH    + II RD+K  NILL+    + KLADFG S++  +     +  TI GT  
Sbjct: 104 GLEYLHS---NGIIHRDLKPENILLDSDNGKVKLADFGLSKL--LTSDKSLLKTIVGTPA 158

Query: 108 FL-------NTELTEKSDVDSFEIVILEI 129
           ++           +EKSD+ S  +++ E+
Sbjct: 159 YMAPEVLLGKGYYSEKSDIWSLGVILYEL 187

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 62.2 bits (152), Expect = 4e-12
 Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 10/90 (11%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+YLH      II RD+K +N+L+N K + K+ADFG S++  +E       T  GT  +
Sbjct: 111 GLDYLHTKRH--IIHRDIKPSNLLINSKGEVKIADFGISKV--LENTLDQCNTFVGTVTY 166

Query: 109 LNTELTE------KSDVDSFEIVILEIITG 132
           ++ E  +       +D+ S  + +LE   G
Sbjct: 167 MSPERIQGESYSYAADIWSLGLTLLECALG 196

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 60.4 bits (147), Expect = 2e-11
 Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 12/90 (13%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL YLH+  KH II RD+K +NIL+N + Q KL DFG S     +    ++ T  GT+ +
Sbjct: 112 GLTYLHE--KHKIIHRDVKPSNILVNSRGQIKLCDFGVSG----QLVNSLAKTFVGTSSY 165

Query: 109 LNTE------LTEKSDVDSFEIVILEIITG 132
           +  E       + KSD+ S  + ++E+ TG
Sbjct: 166 MAPERIQGNDYSVKSDIWSLGLSLIELATG 195

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 59.2 bits (144), Expect = 5e-11
 Identities = 35/90 (38%), Positives = 49/90 (54%), Gaps = 11/90 (12%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GLEYLH    +  I RD+K+ NILLNE+ QAKLADFG S    +        T+ GT  +
Sbjct: 111 GLEYLHS---NKKIHRDIKAGNILLNEEGQAKLADFGVSGQ--LTDTMAKRNTVIGTPFW 165

Query: 109 LNTELTE------KSDVDSFEIVILEIITG 132
           +  E+ +      K+D+ S  I  +E+  G
Sbjct: 166 MAPEVIQEIGYNNKADIWSLGITAIEMAEG 195

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 59.3 bits (144), Expect = 5e-11
 Identities = 36/94 (38%), Positives = 48/94 (51%), Gaps = 14/94 (14%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMS---TTIAGT 105
           GLEYLH    +  I RD+K+ NILL E    K+ADFG S  S  +GG        T  GT
Sbjct: 114 GLEYLH---SNGQIHRDIKAGNILLGEDGSVKIADFGVSA-SLADGGDRTRKVRKTFVGT 169

Query: 106 AGFLNTEL-------TEKSDVDSFEIVILEIITG 132
             ++  E+         K+D+ SF I  +E+ TG
Sbjct: 170 PCWMAPEVMEQVHGYDFKADIWSFGITAIELATG 203

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 58.4 bits (142), Expect = 1e-10
 Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 15/92 (16%)

Query: 49  GLEYLH-QGLKHPIIQRDMKSTNILLNEKVQAKLADFGQS-RISPVEGGTHMSTTIAGTA 106
           GL YLH QG    +I RD+K+ NIL  +    KLADFG + +++ V        ++ GT 
Sbjct: 111 GLAYLHEQG----VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDA---SVVGTP 163

Query: 107 GFLNTE------LTEKSDVDSFEIVILEIITG 132
            ++  E       +  SD+ S    ++E++TG
Sbjct: 164 YWMAPEVIEMSGASTASDIWSLGCTVIELLTG 195

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 57.9 bits (141), Expect = 2e-10
 Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 11/92 (11%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
           C  L+YLH      I+ RD+K  NI L      KL DFG S++  +     ++ T+ GT 
Sbjct: 113 CLALKYLH---SRKILHRDIKPQNIFLTSNGLVKLGDFGISKV--LSSTVDLAKTVVGTP 167

Query: 107 GFLNTEL------TEKSDVDSFEIVILEIITG 132
            +L+ EL        KSD+ S   V+ E+ T 
Sbjct: 168 YYLSPELCQNKPYNYKSDIWSLGCVLYELCTL 199

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 57.5 bits (139), Expect = 2e-10
 Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 11/90 (12%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL +LH      I+ RD+KS N+ L+     K+ D G +++  +   T+ + TI GT  +
Sbjct: 113 GLAHLH---SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKL--LSDNTNFANTIVGTPYY 167

Query: 109 LNTEL------TEKSDVDSFEIVILEIITG 132
           L+ EL       EKSDV +  +V+ E  TG
Sbjct: 168 LSPELCEDKPYNEKSDVWALGVVLYECCTG 197

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 57.5 bits (139), Expect = 3e-10
 Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 33/131 (25%)

Query: 8   KLTGPLLVELIGKQKNNALELGFRGNPELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMK 67
           K  GP+ VE++GK     +E                     GL YL+    H I+ RD+K
Sbjct: 95  KKGGPIPVEILGKIAVAVVE---------------------GLTYLYN--VHRIMHRDIK 131

Query: 68  STNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDS 121
            +NIL+N + Q KL DFG S     E    ++ T  GT+ +++ E       T KSDV S
Sbjct: 132 PSNILVNSRGQIKLCDFGVSG----ELINSIADTFVGTSTYMSPERIQGGKYTVKSDVWS 187

Query: 122 FEIVILEIITG 132
             I I+E+  G
Sbjct: 188 LGISIIELALG 198

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 56.7 bits (138), Expect = 4e-10
 Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 10/95 (10%)

Query: 44  EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT-- 101
           ++   G+EYL        + RD+ + N L+ E +  K++DFG SR    +          
Sbjct: 110 QIAK-GMEYLES---KNFVHRDLAARNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGK 165

Query: 102 --IAGTA--GFLNTELTEKSDVDSFEIVILEIITG 132
             I   A     + + T KSDV SF +++ EI T 
Sbjct: 166 LPIKWMAPESLKDGKFTSKSDVWSFGVLLWEIFTL 200

Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 56.4 bits (137), Expect = 5e-10
 Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 10/94 (10%)

Query: 44  EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT-- 101
           ++   G+EYL        + RD+ + N L+ E +  K++DFG SR    +      T   
Sbjct: 113 QIAK-GMEYLA---SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGK 168

Query: 102 --IAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
             I   A     +   T KSDV SF +++ EI T
Sbjct: 169 LPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFT 202

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 56.7 bits (137), Expect = 6e-10
 Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 13/87 (14%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL YLH      II RD+K +NILL  K Q KL DFG S     E    ++ T  GT+ +
Sbjct: 117 GLSYLHS---RKIIHRDIKPSNILLTRKGQVKLCDFGVSG----ELVNSLAGTFTGTSFY 169

Query: 109 LNTE------LTEKSDVDSFEIVILEI 129
           +  E       +  SDV S  + +LE+
Sbjct: 170 MAPERIQGKPYSITSDVWSLGLTLLEV 196

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 56.4 bits (137), Expect = 7e-10
 Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 27/108 (25%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI------------------S 90
            LEYLH      II RD+K  NILL++ +  K+ DFG +++                  S
Sbjct: 114 ALEYLHS---KGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDS 170

Query: 91  PVEGGTHMSTTIAGTAGFLNTEL------TEKSDVDSFEIVILEIITG 132
            +E       +  GTA +++ EL       + SD+ +   +I +++TG
Sbjct: 171 QIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTG 218

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 56.0 bits (136), Expect = 8e-10
 Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 9/92 (9%)

Query: 45  VCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT--- 101
           +   G+EYL        I RD+ + N L+ E +  K++DFG SR    +           
Sbjct: 111 IAR-GMEYLES---KNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYRKRGGKLP 166

Query: 102 IAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
           I   A       + T KSDV SF +++ EI T
Sbjct: 167 IRWMAPESLKEGKFTSKSDVWSFGVLLWEIFT 198

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 56.2 bits (136), Expect = 8e-10
 Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 7/69 (10%)

Query: 44  EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA 103
           E+    LEYLH      II RD+K  NILL+E+    + DF  +    V   T ++T+ +
Sbjct: 108 EIVL-ALEYLHS---KGIIHRDIKPDNILLDEQGHVHITDFNIATK--VTPDT-LTTSTS 160

Query: 104 GTAGFLNTE 112
           GT G++  E
Sbjct: 161 GTPGYMAPE 169

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 56.1 bits (136), Expect = 8e-10
 Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 13/94 (13%)

Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQS-RISPVEGGTHMSTTIAG 104
              GLEYLH      +I RD+KS NILL++    KLADFG + +++          ++ G
Sbjct: 125 VLQGLEYLHS---QNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTK---EKSKRNSVVG 178

Query: 105 TAGFLNTEL------TEKSDVDSFEIVILEIITG 132
           T  ++  E+        K D+ S  I+ +E+  G
Sbjct: 179 TPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEG 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 56.0 bits (136), Expect = 8e-10
 Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 9/92 (9%)

Query: 45  VCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT--- 101
           +   G+EYL        I RD+ + N L+ E +  K++DFG SR    +    +      
Sbjct: 112 IAR-GMEYLES---KNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKLP 167

Query: 102 IAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
           I   A       + T KSDV SF +++ EI T
Sbjct: 168 IRWMAPESLKEGKFTSKSDVWSFGVLLWEIFT 199

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 55.6 bits (135), Expect = 9e-10
 Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 12/97 (12%)

Query: 44  EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA 103
           E+    LEYLH      II RD+K  NILL+     KL DFG ++    EG    + T  
Sbjct: 101 EIVL-ALEYLHS---LGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSR--TNTFC 154

Query: 104 GTAGFLNTELTEKSD----VD--SFEIVILEIITGIL 134
           GT  +L  E+         VD  S  +++ E++TG  
Sbjct: 155 GTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKP 191

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 53.9 bits (130), Expect = 4e-09
 Identities = 29/96 (30%), Positives = 39/96 (40%), Gaps = 16/96 (16%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAG- 107
           GL YLH    H I+ RD+K  NI L+     KL DFG +        T M   +   AG 
Sbjct: 111 GLAYLHS---HGIVHRDIKPANIFLDHNGVIKLGDFGCAVKL-KNNTTTMGEEVQSLAGT 166

Query: 108 --------FLNTELTEK---SDVDSFEIVILEIITG 132
                       +       +D+ S   V+LE+ TG
Sbjct: 167 PAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATG 202

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 54.0 bits (128), Expect = 7e-09
 Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 21/134 (15%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEK-VQAKLADFGQSRISPVEGGT----HMSTT 101
              LEYLH      II RD+K  NILL+      KL DFG +++ P  G T     + +T
Sbjct: 111 LSALEYLHS---KGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPST 167

Query: 102 IAGTAGFLNTEL---------TEKSDVDSFEIVILEIITGILTVDLSFKGEFDIISVEKA 152
             GT G++  E+         +  SD+ S  I + E++TG+      F+GE +  +  + 
Sbjct: 168 SVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGL----PPFEGEKNSSATSQT 223

Query: 153 VEIAMASVSSKVNR 166
           ++I +   +  +  
Sbjct: 224 LKIILELPTPSLAS 237

Length = 384

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 53.0 bits (128), Expect = 9e-09
 Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 23/96 (23%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTI------ 102
           GLEYLH+  K   I RD+K+ NILL+E+   KLADFG S          +++T+      
Sbjct: 110 GLEYLHEEGK---IHRDIKAANILLSEEGDVKLADFGVS--------GQLTSTMSKRNTF 158

Query: 103 AGTAGFL------NTELTEKSDVDSFEIVILEIITG 132
            GT  ++       +   EK+D+ S  I  +E+  G
Sbjct: 159 VGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKG 194

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 52.5 bits (127), Expect = 1e-08
 Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 3/40 (7%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR 88
           GL+YLH    + I+ RD+K +NIL+N     KLADFG +R
Sbjct: 112 GLQYLHS---NGILHRDIKGSNILINNDGVLKLADFGLAR 148

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 52.5 bits (127), Expect = 1e-08
 Identities = 20/40 (50%), Positives = 24/40 (60%), Gaps = 3/40 (7%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR 88
           GL Y H    H I+ RD+K  NIL+N     KLADFG +R
Sbjct: 110 GLAYCHS---HRILHRDLKPQNILINRDGVLKLADFGLAR 146

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 52.6 bits (127), Expect = 1e-08
 Identities = 29/97 (29%), Positives = 40/97 (41%), Gaps = 15/97 (15%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFG------QSRISPVEGGTHMSTTI 102
            LEYLH    + II RD+K  NIL++     KL DFG        R   +         I
Sbjct: 105 ALEYLHS---NGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRI 161

Query: 103 AGTAGFLNTELTEKSD----VD--SFEIVILEIITGI 133
            GT  ++  E+         VD  S   ++ E + GI
Sbjct: 162 VGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGI 198

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 52.6 bits (127), Expect = 2e-08
 Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 5/56 (8%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI--SPVEGGTHMSTTI 102
           GLEYLH    + I+ RD+K  N+L+      KLADFG +R   SP    TH   T 
Sbjct: 114 GLEYLH---SNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMTHQVVTR 166

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 52.0 bits (125), Expect = 2e-08
 Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 18/110 (16%)

Query: 50  LEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQS-RISPVEGGTHMSTTIAGTAGF 108
           L YL +  KH +I RD+K +NILL+     KL DFG S R+  V+      T  AG A +
Sbjct: 127 LHYLKE--KHGVIHRDVKPSNILLDASGNVKLCDFGISGRL--VDSKAK--TRSAGCAAY 180

Query: 109 LNTELTE----------KSDVDSFEIVILEIITGILTVDLSFKGEFDIIS 148
           +  E  +          ++DV S  I ++E+ TG        K EF++++
Sbjct: 181 MAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNC-KTEFEVLT 229

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 50.9 bits (122), Expect = 5e-08
 Identities = 36/99 (36%), Positives = 50/99 (50%), Gaps = 25/99 (25%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGT--A 106
            LEYLH  L   +I RD+K +N+L+N   Q KL DFG S         ++  ++A T  A
Sbjct: 115 ALEYLHSKLS--VIHRDVKPSNVLINRNGQVKLCDFGIS--------GYLVDSVAKTIDA 164

Query: 107 GF--------LNTELTE-----KSDVDSFEIVILEIITG 132
           G         +N EL +     KSDV S  I ++E+ TG
Sbjct: 165 GCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATG 203

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 50.8 bits (122), Expect = 7e-08
 Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 24/114 (21%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMST--TIAG 104
             GL+YLH+   + I+ RD+K  N+LL+ +   K+ADFG  +    EG        T  G
Sbjct: 111 VLGLQYLHE---NKIVYRDLKLDNLLLDTEGFVKIADFGLCK----EGMGFGDRTSTFCG 163

Query: 105 TAGFLNTE-LTEKS---DVD--SFEIVILEIITGILTVDLSFKGE-----FDII 147
           T  FL  E LTE S    VD     ++I E++ G    +  F G+     FD I
Sbjct: 164 TPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVG----ESPFPGDDEEEVFDSI 213

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 50.1 bits (120), Expect = 9e-08
 Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 12/90 (13%)

Query: 50  LEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFL 109
           L+Y+H   K  +I RD+K+ NIL+      KL DFG +  + +   +   +T  GT  ++
Sbjct: 114 LKYIH---KVGVIHRDIKAANILVTNTGNVKLCDFGVA--ALLNQNSSKRSTFVGTPYWM 168

Query: 110 NTE-LTE------KSDVDSFEIVILEIITG 132
             E +TE      K+D+ S  I I E+ TG
Sbjct: 169 APEVITEGKYYDTKADIWSLGITIYEMATG 198

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 50.0 bits (120), Expect = 1e-07
 Identities = 24/46 (52%), Positives = 26/46 (56%), Gaps = 6/46 (13%)

Query: 45  VCCP---GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQS 87
           VC     GL YLH+  K   I RD+K  NILL E    KLADFG S
Sbjct: 106 VCRETLKGLAYLHETGK---IHRDIKGANILLTEDGDVKLADFGVS 148

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 49.9 bits (120), Expect = 1e-07
 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 10/88 (11%)

Query: 50  LEYLHQGL--KHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAG 107
           L   H      + ++ RD+K  NI L+     KL DFG ++I  +   +  + T  GT  
Sbjct: 118 LYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKI--LGHDSSFAKTYVGTPY 175

Query: 108 FLNTEL------TEKSDVDSFEIVILEI 129
           +++ E        EKSD+ S   +I E+
Sbjct: 176 YMSPEQLNHMSYDEKSDIWSLGCLIYEL 203

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 49.6 bits (119), Expect = 2e-07
 Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 5/57 (8%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI--SPVEGGTHMSTT 101
             GL + H    H I+ RD+K  N+L+N +   KLADFG +R   SPV   TH   T
Sbjct: 108 LQGLAFCH---SHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVVT 161

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 49.6 bits (119), Expect = 2e-07
 Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 3/41 (7%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI 89
           G+++LH    H I+ RD+K  NIL+    Q K+ADFG +RI
Sbjct: 119 GVDFLHS---HRIVHRDLKPQNILVTSDGQVKIADFGLARI 156

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 49.0 bits (117), Expect = 3e-07
 Identities = 38/123 (30%), Positives = 56/123 (45%), Gaps = 16/123 (13%)

Query: 14  LVELIGKQKNNALELGFRGNPELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILL 73
           L+E +      AL+L     P+L+D   +      G+ YL        I RD+ + N+L+
Sbjct: 88  LLEYLQGGAGRALKL-----PQLIDMAAQ---VASGMAYLEA---QNYIHRDLAARNVLV 136

Query: 74  NEKVQAKLADFGQSRI---SPVEGGTHMSTTIAGTA--GFLNTELTEKSDVDSFEIVILE 128
            E    K+ADFG +R+      E        I  TA    L    + KSDV SF I++ E
Sbjct: 137 GENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTE 196

Query: 129 IIT 131
           I+T
Sbjct: 197 IVT 199

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 48.9 bits (117), Expect = 3e-07
 Identities = 36/103 (34%), Positives = 48/103 (46%), Gaps = 11/103 (10%)

Query: 34  PELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR-ISPV 92
           P+LVD   +      G+ YL        I RD+ + NIL+ E +  K+ADFG +R I   
Sbjct: 103 PQLVDMAAQ---IAEGMAYLES---RNYIHRDLAARNILVGENLVCKIADFGLARLIEDD 156

Query: 93  EGGTHMSTT--IAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
           E          I  TA         T KSDV SF I++ EI+T
Sbjct: 157 EYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVT 199

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 48.8 bits (117), Expect = 3e-07
 Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 3/40 (7%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR 88
           GL YLH+   + +I RD+K  NILL +  + KL DFG S 
Sbjct: 125 GLAYLHE---NKVIHRDIKGQNILLTKNAEVKLVDFGVSA 161

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 49.0 bits (117), Expect = 3e-07
 Identities = 32/91 (35%), Positives = 43/91 (47%), Gaps = 20/91 (21%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI-SPVEGGTHMSTTIAGTAG 107
           GL YLH    H  I RD+K+ NILL E    KLADFG + + SP       + +  GT  
Sbjct: 127 GLAYLHS---HERIHRDIKAGNILLTEPGTVKLADFGSASLVSP-------ANSFVGTPY 176

Query: 108 FLNTEL---------TEKSDVDSFEIVILEI 129
           ++  E+           K DV S  I  +E+
Sbjct: 177 WMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 48.6 bits (116), Expect = 4e-07
 Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 15/90 (16%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G+E LHQ     II RD+K  N+L+++    KL DFG SR          +    GT  +
Sbjct: 109 GVEDLHQ---RGIIHRDIKPENLLIDQTGHLKLTDFGLSRNG------LENKKFVGTPDY 159

Query: 109 LNTEL------TEKSDVDSFEIVILEIITG 132
           L  E        + SD  S   VI E + G
Sbjct: 160 LAPETILGVGDDKMSDWWSLGCVIFEFLFG 189

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 48.5 bits (116), Expect = 5e-07
 Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 6/58 (10%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI---SPVEGGTHMSTTIA 103
           GL+Y+H      +I RD+K +N+L+NE  + ++ DFG +R    SP E    M+  +A
Sbjct: 119 GLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVA 173

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 48.2 bits (115), Expect = 5e-07
 Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 16/92 (17%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTH--MSTTIAGTA 106
           GL YL +  KH I+ RD+K +NIL+N + + KL DFG      V G     M+ +  GT 
Sbjct: 111 GLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFG------VSGQLIDSMANSFVGTR 162

Query: 107 GFLNTE------LTEKSDVDSFEIVILEIITG 132
            +++ E       T +SD+ S  + ++E+  G
Sbjct: 163 SYMSPERLQGTHYTVQSDIWSLGLSLVEMAIG 194

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 47.9 bits (115), Expect = 5e-07
 Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 15/96 (15%)

Query: 44  EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA 103
           +V    LEYLH      I+ RD+K  N+LL+     K+ DFG ++   V+G T+   T+ 
Sbjct: 109 QVVL-ALEYLHS--LD-IVYRDLKPENLLLDSDGYIKITDFGFAKR--VKGRTY---TLC 159

Query: 104 GTAGFLNTELTEKSD----VD--SFEIVILEIITGI 133
           GT  +L  E+         VD  +  I+I E++ G 
Sbjct: 160 GTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGY 195

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 47.8 bits (114), Expect = 5e-07
 Identities = 39/146 (26%), Positives = 61/146 (41%), Gaps = 24/146 (16%)

Query: 8   KLTGPLLVELIG---KQK----------NNALELGFRGNPELVDQQGKEEVC---CPGLE 51
           KL+ P LV+L G   KQ+          N  L    R     +  +   ++C   C  +E
Sbjct: 55  KLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAME 114

Query: 52  YLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRIS-----PVEGGTHMSTTIAGTA 106
           YL     +  I RD+ + N L+ E    K++DFG +R           GT      A   
Sbjct: 115 YLE---SNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPE 171

Query: 107 GFLNTELTEKSDVDSFEIVILEIITG 132
            F  +  + KSDV SF +++ E+ + 
Sbjct: 172 VFDYSRFSSKSDVWSFGVLMWEVFSE 197

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 48.1 bits (115), Expect = 6e-07
 Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 3/41 (7%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI 89
           G+ YLH+   H I+ RD+K+ NIL++ +   K+ADFG +R 
Sbjct: 127 GINYLHE--NH-ILHRDIKAANILIDNQGILKIADFGLARP 164

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 47.9 bits (114), Expect = 7e-07
 Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 24/111 (21%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI---------SPVEGGTHMS 99
           G+ YLH   +  I+ RD+K +N+L+N     K+ADFG SRI         S V    +MS
Sbjct: 180 GIAYLH---RRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSVGTIAYMS 236

Query: 100 TTIAGTAGFLNTELTE------KSDVDSFEIVILEIITGILTVDLSFKGEF 144
                    +NT+L          D+ S  + ILE   G     +  +G++
Sbjct: 237 PE------RINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDW 281

Length = 353

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 46.8 bits (112), Expect = 1e-06
 Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 12/89 (13%)

Query: 50  LEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFL 109
            EYLH      II RD+K  N+LL+     KL DFG ++       T    T  GT  ++
Sbjct: 106 FEYLHN---RGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTW---TFCGTPEYV 159

Query: 110 NTELTEK------SDVDSFEIVILEIITG 132
             E+          D  S  I++ E++TG
Sbjct: 160 APEIILNKGYDFSVDYWSLGILLYELLTG 188

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 46.7 bits (111), Expect = 1e-06
 Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 12/92 (13%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFG---------QSRISPVEGGTH 97
              L +LH    H +I RD+K+ NILL      KLADFG         Q R + +     
Sbjct: 113 LEALNFLHS---HKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIGTPYW 169

Query: 98  MSTTIAGTAGFLNTELTEKSDVDSFEIVILEI 129
           M+  +     F +     K+D+ S  I ++E+
Sbjct: 170 MAPEVVACETFKDNPYDYKADIWSLGITLIEL 201

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 46.6 bits (110), Expect = 2e-06
 Identities = 23/42 (54%), Positives = 27/42 (64%), Gaps = 3/42 (7%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRIS 90
           GL YLH    H +I RD+K+ NILL E  Q KLADFG +  S
Sbjct: 133 GLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASKS 171

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 46.1 bits (109), Expect = 2e-06
 Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 15/93 (16%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI--SPVEGGTHMSTTIAG 104
           C G++++H   +  ++ RD+KS NI L +  + KL DFG +R+  SP       + T  G
Sbjct: 110 CLGVQHIH---EKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA----YACTYVG 162

Query: 105 TAGFLNTELTE------KSDVDSFEIVILEIIT 131
           T  ++  E+ E      KSD+ S   ++ E+ T
Sbjct: 163 TPYYVPPEIWENMPYNNKSDIWSLGCILYELCT 195

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 46.2 bits (110), Expect = 2e-06
 Identities = 34/97 (35%), Positives = 46/97 (47%), Gaps = 24/97 (24%)

Query: 50  LEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGT--AG 107
           L YL + LK  II RD+K +NILL+     KL DFG   IS       +  +IA T  AG
Sbjct: 120 LNYLKEELK--IIHRDVKPSNILLDRNGNIKLCDFG---IS-----GQLVDSIAKTRDAG 169

Query: 108 F--------LNTELTE----KSDVDSFEIVILEIITG 132
                    ++    +    +SDV S  I + E+ TG
Sbjct: 170 CRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATG 206

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 46.1 bits (110), Expect = 3e-06
 Identities = 16/40 (40%), Positives = 27/40 (67%), Gaps = 3/40 (7%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR 88
           G+ +LH    + I+ RD+K++N+LLN +   K+ DFG +R
Sbjct: 118 GVAHLHD---NWILHRDLKTSNLLLNNRGILKICDFGLAR 154

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 46.0 bits (109), Expect = 3e-06
 Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 6/75 (8%)

Query: 44  EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA 103
           EV    L +LH+   H +I RD+K  NILL+ +   KLADFG  +   + G T  +TT  
Sbjct: 104 EVTL-ALMFLHR---HGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVT--TTTFC 157

Query: 104 GTAGFLNTELTEKSD 118
           GT  ++  E+ ++ +
Sbjct: 158 GTPDYIAPEILQELE 172

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 45.9 bits (109), Expect = 3e-06
 Identities = 22/41 (53%), Positives = 27/41 (65%), Gaps = 3/41 (7%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI 89
           GL Y H   K   + RD+K +NILLN K Q KLADFG +R+
Sbjct: 128 GLNYCH---KKNFLHRDIKCSNILLNNKGQIKLADFGLARL 165

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 45.8 bits (109), Expect = 3e-06
 Identities = 20/40 (50%), Positives = 29/40 (72%), Gaps = 3/40 (7%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR 88
           GL+YLH+   + II RD+K +N+LL +K   K+ADFG +R
Sbjct: 120 GLQYLHE---NFIIHRDLKVSNLLLTDKGCLKIADFGLAR 156

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 45.9 bits (109), Expect = 3e-06
 Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 10/87 (11%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISP--VEGGTHMSTTIAG 104
           C G+EYL +      + RD+ + N+L++E + AK++DFG ++ +    + G      +  
Sbjct: 112 CEGMEYLEE---KNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSG---KLPVKW 165

Query: 105 TA--GFLNTELTEKSDVDSFEIVILEI 129
           TA       + + KSDV SF I++ EI
Sbjct: 166 TAPEALREKKFSTKSDVWSFGILLWEI 192

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 45.6 bits (108), Expect = 3e-06
 Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 11/92 (11%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL YLH      I+ RD+K+ N+L++     K++DFG S+ S        + ++ G+  +
Sbjct: 120 GLAYLH---SKGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFW 176

Query: 109 LNTEL--------TEKSDVDSFEIVILEIITG 132
           +  E+        + K D+ S   V+LE+  G
Sbjct: 177 MAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAG 208

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 45.6 bits (109), Expect = 3e-06
 Identities = 20/39 (51%), Positives = 27/39 (69%), Gaps = 3/39 (7%)

Query: 50  LEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR 88
           L+Y+H G    +I RD+K +NILLN   + KLADFG +R
Sbjct: 120 LKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLAR 155

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 45.6 bits (108), Expect = 3e-06
 Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 13/89 (14%)

Query: 50  LEYLHQGLKHPIIQRDMKSTNILLNE-KVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           L ++H      I+ RD+K+ NILL++ K+  K+ DFG   IS +      + T+ GT  +
Sbjct: 114 LHHVHT---KLILHRDLKTQNILLDKHKMVVKIGDFG---ISKILSSKSKAYTVVGTPCY 167

Query: 109 LNTELTE------KSDVDSFEIVILEIIT 131
           ++ EL E      KSD+ +   V+ E+ +
Sbjct: 168 ISPELCEGKPYNQKSDIWALGCVLYELAS 196

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 45.6 bits (108), Expect = 4e-06
 Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 15/93 (16%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI--SPVEGGTHMSTTIAG 104
           C  L+++H      I+ RD+KS NI L +    KL DFG +R+  S VE    ++ T  G
Sbjct: 111 CLALKHVHD---RKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE----LARTCIG 163

Query: 105 TAGFLNTELTE------KSDVDSFEIVILEIIT 131
           T  +L+ E+ E      KSD+ +   V+ E+ T
Sbjct: 164 TPYYLSPEICENRPYNNKSDIWALGCVLYEMCT 196

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 45.8 bits (109), Expect = 4e-06
 Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 11/90 (12%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL++LH+     II RD+K  N+LL+ +   K+ADFG  +   + G T  ++T  GT  +
Sbjct: 108 GLQFLHE---RGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVT--TSTFCGTPDY 162

Query: 109 LNTE-LTEKS---DVD--SFEIVILEIITG 132
           +  E L+ +     VD  +  +++ E++ G
Sbjct: 163 IAPEILSYQPYGPAVDWWALGVLLYEMLAG 192

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 45.9 bits (108), Expect = 4e-06
 Identities = 25/44 (56%), Positives = 29/44 (65%), Gaps = 4/44 (9%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI-SP 91
           GL YLH    H +I RD+K+ NILL E  Q KLADFG + I SP
Sbjct: 137 GLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASIASP 177

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 45.6 bits (108), Expect = 5e-06
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 12/95 (12%)

Query: 44  EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA 103
           E+ C GL++LH   K  II RD+K  N+LL++    K+ADFG  + +    G   ++T  
Sbjct: 104 EIIC-GLQFLH---KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMN--GEGKASTFC 157

Query: 104 GTAGFLNTEL------TEKSDVDSFEIVILEIITG 132
           GT  ++  E+       E  D  SF +++ E++ G
Sbjct: 158 GTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIG 192

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 44.9 bits (106), Expect = 5e-06
 Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 15/88 (17%)

Query: 56  GLKH----PIIQRDMKSTNILL--NEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFL 109
           GLKH     I+ RD+KS NI L  N  V AKL DFG +R   +     ++ T  GT  +L
Sbjct: 113 GLKHIHDRKILHRDIKSQNIFLSKNGMV-AKLGDFGIARQ--LNDSMELAYTCVGTPYYL 169

Query: 110 NTELTE------KSDVDSFEIVILEIIT 131
           + E+ +      K+D+ S   V+ E+ T
Sbjct: 170 SPEICQNRPYNNKTDIWSLGCVLYELCT 197

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 45.3 bits (107), Expect = 5e-06
 Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 18/91 (19%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL YLH      II RD+K+ NI +N+  Q  + D G ++   V           G AG 
Sbjct: 169 GLRYLHA---QRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA------PAFLGLAGT 219

Query: 109 LNTELTE---------KSDVDSFEIVILEII 130
           + T   E         K+D+ S  IV+ E++
Sbjct: 220 VETNAPEVLARDKYNSKADIWSAGIVLFEML 250

Length = 357

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 45.2 bits (107), Expect = 6e-06
 Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 10/90 (11%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQS-RISPVEGGTHMSTTIAGTAG 107
           G+EYLH    + I+ RD+K  NIL +     KL DFG S R+  +        ++ GT  
Sbjct: 116 GVEYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPY 172

Query: 108 FLNTELT------EKSDVDSFEIVILEIIT 131
           +++ E+        K+DV S    ++E++T
Sbjct: 173 WMSPEVISGEGYGRKADVWSVGCTVVEMLT 202

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 44.7 bits (106), Expect = 7e-06
 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 3/40 (7%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR 88
           GLEYLH       + RD+K  NIL++     KLADFG ++
Sbjct: 114 GLEYLHD---RNTVHRDIKGANILVDTNGVVKLADFGMAK 150

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 45.0 bits (106), Expect = 7e-06
 Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 3/49 (6%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTH 97
           GL Y H   K  I+ RD+K  N+L+NEK + KLADFG +R   V   T+
Sbjct: 115 GLSYCH---KRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTY 160

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 44.7 bits (106), Expect = 7e-06
 Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 11/91 (12%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
              + Y+H   K  I+ RD+K+ NI L +    KL DFG S+I   E    M+ T+ GT 
Sbjct: 111 VSAVSYIH---KAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSE--YSMAETVVGTP 165

Query: 107 GFLNTELTE------KSDVDSFEIVILEIIT 131
            +++ EL +      KSD+ +   V+ E++T
Sbjct: 166 YYMSPELCQGVKYNFKSDIWALGCVLYELLT 196

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 44.5 bits (105), Expect = 8e-06
 Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 7/76 (9%)

Query: 62  IQRDMKSTNILLNEKVQAKLADFGQSRI------SPVEGGTHMSTTIAGTAGFLNTELTE 115
           I RD+++ NIL++E +  K+ADFG +R+      +  EG        A  A    T  T 
Sbjct: 124 IHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT-FTI 182

Query: 116 KSDVDSFEIVILEIIT 131
           KSDV SF I++ EI+T
Sbjct: 183 KSDVWSFGILLTEIVT 198

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 44.9 bits (106), Expect = 8e-06
 Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 3/41 (7%)

Query: 50  LEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRIS 90
           L+YLH+   H II RD+K  N+L++ +   KL DFG S+++
Sbjct: 117 LDYLHR---HGIIHRDLKPDNMLISNEGHIKLTDFGLSKVT 154

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 44.8 bits (106), Expect = 8e-06
 Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 13/95 (13%)

Query: 44  EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA 103
           ++ C GLE+LHQ     I+ RD+K  N+LL++    +++D G +               A
Sbjct: 103 QIIC-GLEHLHQ---RRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGR---A 155

Query: 104 GTAGFLNTELTEK----SDVDSFEI--VILEIITG 132
           GT G++  E+ +       VD F +   + E+I G
Sbjct: 156 GTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAG 190

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 44.6 bits (105), Expect = 8e-06
 Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 11/88 (12%)

Query: 50  LEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFL 109
           L+YLH+  KH I+ RD+K+ N+ L      K+ D G +R+  +E    M++T+ GT  ++
Sbjct: 115 LQYLHE--KH-ILHRDLKTQNVFLTRTNIIKVGDLGIARV--LENQCDMASTLIGTPYYM 169

Query: 110 NTEL------TEKSDVDSFEIVILEIIT 131
           + EL        KSDV +    + E+ T
Sbjct: 170 SPELFSNKPYNYKSDVWALGCCVYEMAT 197

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 44.6 bits (105), Expect = 8e-06
 Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 6/87 (6%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
             G+EYL       ++ RD+ + NIL++E   AK++DFG +R+    G  +    +  TA
Sbjct: 110 AEGMEYLES---KKLVHRDLAARNILVSEDGVAKVSDFGLARVGS-MGVDNSKLPVKWTA 165

Query: 107 --GFLNTELTEKSDVDSFEIVILEIIT 131
                + + + KSDV S+ +++ E+ +
Sbjct: 166 PEALKHKKFSSKSDVWSYGVLLWEVFS 192

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 44.5 bits (105), Expect = 1e-05
 Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 13/94 (13%)

Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFG-QSRISPVEGGTHMSTTIAG 104
           C   LE+LH    + +I RD+KS NILL      KL DFG  ++I+P +      +T+ G
Sbjct: 124 CLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ---SKRSTMVG 177

Query: 105 TAGFLNTELTE------KSDVDSFEIVILEIITG 132
           T  ++  E+        K D+ S  I+ +E++ G
Sbjct: 178 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEG 211

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 44.4 bits (105), Expect = 1e-05
 Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 13/90 (14%)

Query: 50  LEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGG-THMSTTIAGTAGF 108
           LE+LHQ     II RD+K  NILL+ +   KL DFG  + S  EG  TH   T  GT  +
Sbjct: 113 LEHLHQ---QGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTH---TFCGTIEY 166

Query: 109 LNTELTEKS----DVD--SFEIVILEIITG 132
           +  E+  +S     VD  S   ++ +++TG
Sbjct: 167 MAPEILMRSGHGKAVDWWSLGALMYDMLTG 196

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 44.2 bits (105), Expect = 1e-05
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA 103
             G+ Y+H    + I+ RD+K  N+L++     K+ADFG +R+   E     S  +A
Sbjct: 109 LKGVAYMH---ANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVA 162

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 44.5 bits (105), Expect = 1e-05
 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 5/72 (6%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GLE+LHQ     II RD+K  N+LL+     +++D G +    ++ G   +   AGT GF
Sbjct: 109 GLEHLHQ---RRIIYRDLKPENVLLDNDGNVRISDLGLA--VELKDGQSKTKGYAGTPGF 163

Query: 109 LNTELTEKSDVD 120
           +  EL +  + D
Sbjct: 164 MAPELLQGEEYD 175

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 44.4 bits (105), Expect = 1e-05
 Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 3/41 (7%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI 89
           GL+Y+H      ++ RD+K +NIL+NE    K+ DFG +RI
Sbjct: 120 GLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLARI 157

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 44.2 bits (105), Expect = 1e-05
 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 5/53 (9%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI--SPVEGGTH 97
             G+ Y H    H ++ RD+K  N+L++ +   KLADFG +R    PV   TH
Sbjct: 109 LQGIAYCHS---HRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTH 158

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 43.9 bits (103), Expect = 1e-05
 Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 16/95 (16%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL +LHQ   H +I RD+K  N+LL E  + KL DFG S  + ++       T  GT  +
Sbjct: 123 GLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVS--AQLDRTVGRRNTFIGTPYW 177

Query: 109 LNTELTE-----------KSDVDSFEIVILEIITG 132
           +  E+             KSD+ S  I  +E+  G
Sbjct: 178 MAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 212

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 43.7 bits (104), Expect = 2e-05
 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR 88
           GL ++H   KH    RD+K  N+L++     K+ADFG +R
Sbjct: 111 GLAHIH---KHGFFHRDLKPENLLVSGPEVVKIADFGLAR 147

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 43.9 bits (103), Expect = 2e-05
 Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 5/73 (6%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+YLH   K   I RD+K+ N+LL+E+   KLADFG +    +        T  GT  +
Sbjct: 113 GLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTFVGTPFW 167

Query: 109 LNTELTEKSDVDS 121
           +  E+ ++S  DS
Sbjct: 168 MAPEVIQQSAYDS 180

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 43.9 bits (103), Expect = 2e-05
 Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 12/90 (13%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL YL +  KH I+ RD+K +NIL+N + + KL DFG S     +    M+ +  GT  +
Sbjct: 115 GLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSG----QLIDSMANSFVGTRSY 168

Query: 109 LN------TELTEKSDVDSFEIVILEIITG 132
           ++      T  + +SD+ S  + ++E+  G
Sbjct: 169 MSPERLQGTHYSVQSDIWSMGLSLVEMAIG 198

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 43.5 bits (103), Expect = 2e-05
 Identities = 18/40 (45%), Positives = 27/40 (67%), Gaps = 3/40 (7%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR 88
           GL Y HQ     ++ RD+K  N+L++E+ + KLADFG +R
Sbjct: 115 GLAYCHQ---RRVLHRDLKPQNLLISERGELKLADFGLAR 151

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 43.9 bits (103), Expect = 2e-05
 Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 12/90 (13%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL YL +  KH I+ RD+K +NIL+N + + KL DFG S     +    M+ +  GT  +
Sbjct: 115 GLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSG----QLIDSMANSFVGTRSY 168

Query: 109 LN------TELTEKSDVDSFEIVILEIITG 132
           ++      T  + +SD+ S  + ++E+  G
Sbjct: 169 MSPERLQGTHYSVQSDIWSMGLSLVELAIG 198

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 43.7 bits (103), Expect = 2e-05
 Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 17/96 (17%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT------I 102
           GL YLH      II RD+K  NIL++ K   K++DFG S+   +E  +  + T      +
Sbjct: 118 GLNYLHN---RGIIHRDIKGANILVDNKGGIKISDFGISK--KLEANSLSTKTNGARPSL 172

Query: 103 AGTAGFLNTEL------TEKSDVDSFEIVILEIITG 132
            G+  ++  E+      T K+D+ S   +++E++TG
Sbjct: 173 QGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTG 208

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 43.7 bits (103), Expect = 2e-05
 Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 13/91 (14%)

Query: 55  QGLK-----HPIIQRDMKSTNILLNEKVQAKLADFGQS-----RISPVEGG--THMSTT- 101
           +GLK     H II RD+K TN+L+N   Q KL DFG S      ++    G  ++M+   
Sbjct: 113 KGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKTNIGCQSYMAPER 172

Query: 102 IAGTAGFLNTELTEKSDVDSFEIVILEIITG 132
           I       N   T +SDV S  + ILE+  G
Sbjct: 173 IKSGGPNQNPTYTVQSDVWSLGLSILEMALG 203

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 43.6 bits (103), Expect = 2e-05
 Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 15/101 (14%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            L++LH  L   II RD+K  NILL+E+   KL DFG S+ S        + +  GT  +
Sbjct: 110 ALDHLH-SLG--IIYRDLKPENILLDEEGHIKLTDFGLSKES--IDHEKKAYSFCGTVEY 164

Query: 109 LNTEL------TEKSDVDSFEIVILEIITGILTVDLSFKGE 143
           +  E+      T+ +D  SF +++ E++TG     L F+G+
Sbjct: 165 MAPEVVNRRGHTQSADWWSFGVLMFEMLTG----SLPFQGK 201

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 43.1 bits (102), Expect = 2e-05
 Identities = 28/92 (30%), Positives = 38/92 (41%), Gaps = 10/92 (10%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEG-----GTHMSTT 101
             G+ YL    K   I RD+ + NILL    + K+ DFG  R  P          H+   
Sbjct: 107 ANGMRYLES--KR-FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVP 163

Query: 102 IAGTA-GFLNT-ELTEKSDVDSFEIVILEIIT 131
            A  A   L T   +  SDV  F + + E+ T
Sbjct: 164 FAWCAPESLRTRTFSHASDVWMFGVTLWEMFT 195

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 43.5 bits (102), Expect = 2e-05
 Identities = 20/41 (48%), Positives = 27/41 (65%), Gaps = 3/41 (7%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI 89
           GL++LH    H ++ RD+K  NIL+    Q KLADFG +RI
Sbjct: 122 GLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARI 159

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 43.5 bits (102), Expect = 2e-05
 Identities = 21/41 (51%), Positives = 26/41 (63%), Gaps = 3/41 (7%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI 89
           GL YLH    H +I RD+K+ NILL+E    KL DFG + I
Sbjct: 127 GLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASI 164

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 43.1 bits (102), Expect = 2e-05
 Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 13/91 (14%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G++YL    +   + RD+ + NIL+N  +  K++DFG SR       T+  TT  G    
Sbjct: 118 GMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATY--TTKGGKIPI 172

Query: 109 LNT--------ELTEKSDVDSFEIVILEIIT 131
             T        + T  SDV SF IV+ E+++
Sbjct: 173 RWTAPEAIAYRKFTSASDVWSFGIVMWEVMS 203

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 43.1 bits (101), Expect = 2e-05
 Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 11/103 (10%)

Query: 34  PELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI---- 89
           P LVD   +      G+ Y+    +   I RD++S NIL+ + +  K+ADFG +R+    
Sbjct: 102 PNLVDMAAQ---VAAGMAYIE---RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDN 155

Query: 90  -SPVEGGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILEIIT 131
                 G             L    T KSDV SF I++ E++T
Sbjct: 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVT 198

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 43.0 bits (101), Expect = 3e-05
 Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 12/87 (13%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G+ Y+HQ     I+ RD+K+ NI L   +  K+ DFG SR+  + G   ++TT  GT  +
Sbjct: 118 GVHYMHQ---RRILHRDLKAKNIFLKNNL-LKIGDFGVSRL--LMGSCDLATTFTGTPYY 171

Query: 109 LNTELTE------KSDVDSFEIVILEI 129
           ++ E  +      KSD+ S   ++ E+
Sbjct: 172 MSPEALKHQGYDSKSDIWSLGCILYEM 198

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 43.1 bits (101), Expect = 3e-05
 Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 3/54 (5%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTI 102
           GL Y H   +  ++ RD+K  N+L+NE+ + KLADFG +R   V   T+ +  +
Sbjct: 116 GLAYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVV 166

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 43.0 bits (101), Expect = 3e-05
 Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 12/95 (12%)

Query: 44  EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA 103
           E+ C GL++LH      II RD+K  N++L+     K+ADFG  + +    G + ++T  
Sbjct: 104 EIVC-GLQFLHS---KGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVF--GDNRASTFC 157

Query: 104 GTAGFLNTEL------TEKSDVDSFEIVILEIITG 132
           GT  ++  E+      T   D  SF +++ E++ G
Sbjct: 158 GTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIG 192

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 42.6 bits (100), Expect = 4e-05
 Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 13/90 (14%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL YL   LK  I+ RD+K +N+L+N + Q KL DFG S     +    ++ T  GT  +
Sbjct: 107 GLTYL-WSLK--ILHRDVKPSNMLVNTRGQVKLCDFGVST----QLVNSIAKTYVGTNAY 159

Query: 109 LNTE--LTEK----SDVDSFEIVILEIITG 132
           +  E    E+    SDV S  I  +E+  G
Sbjct: 160 MAPERISGEQYGIHSDVWSLGISFMELALG 189

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 42.6 bits (100), Expect = 4e-05
 Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 3/41 (7%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI 89
           GL++LH      I+ RD+K  NIL+    Q KLADFG +RI
Sbjct: 120 GLDFLHANC---IVHRDLKPENILVTSGGQVKLADFGLARI 157

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 42.4 bits (100), Expect = 4e-05
 Identities = 31/93 (33%), Positives = 42/93 (45%), Gaps = 11/93 (11%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR-----ISPVEGGTHMSTT 101
             G+EYL        I RD+ + N L+ E    K++DFG SR     I  V  G      
Sbjct: 103 AAGMEYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLK-QIP 158

Query: 102 IAGTA-GFLNT-ELTEKSDVDSFEIVILEIITG 132
           I  TA   LN    T +SDV S+ I++ E  + 
Sbjct: 159 IKWTAPEALNYGRYTSESDVWSYGILLWETFSL 191

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 42.5 bits (100), Expect = 4e-05
 Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 11/91 (12%)

Query: 50  LEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFL 109
           L YLH      ++ RD+K  N++L++    K+ DFG  +    +G T    T  GT  +L
Sbjct: 108 LGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKTFCGTPEYL 162

Query: 110 NTELTEKSD----VD--SFEIVILEIITGIL 134
             E+ E +D    VD     +V+ E++ G L
Sbjct: 163 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 193

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 42.2 bits (99), Expect = 4e-05
 Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 24/145 (16%)

Query: 8   KLTGPLLVELIGKQKNNA---LELGFRGNPELVD----QQGK------EEVC---CPGLE 51
           KL+ P LV+L G     +   L   F  +  L D    Q+GK        +C   C G+ 
Sbjct: 55  KLSHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMA 114

Query: 52  YLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRIS-----PVEGGTHMSTTIAGTA 106
           YL       +I RD+ + N L+ E    K++DFG +R           GT      +   
Sbjct: 115 YLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPE 171

Query: 107 GFLNTELTEKSDVDSFEIVILEIIT 131
            F  ++ + KSDV SF +++ E+ +
Sbjct: 172 VFSFSKYSSKSDVWSFGVLMWEVFS 196

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 42.4 bits (99), Expect = 4e-05
 Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 11/103 (10%)

Query: 34  PELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI---- 89
           P+LVD   +      G+ Y+    +   I RD+++ NIL+ + +  K+ADFG +R+    
Sbjct: 102 PQLVDMAAQ---IADGMAYIE---RMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDN 155

Query: 90  -SPVEGGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILEIIT 131
                 G             L    T KSDV SF I++ E++T
Sbjct: 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVT 198

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 42.4 bits (100), Expect = 4e-05
 Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 3/40 (7%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR 88
           GL + H    H ++ RD+K  N+L+N+  + KLADFG +R
Sbjct: 111 GLAFCHS---HNVLHRDLKPQNLLINKNGELKLADFGLAR 147

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 42.3 bits (100), Expect = 5e-05
 Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 9/89 (10%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR------ISPVEGGTHMSTTI 102
           G+ YL        + RD+ + N L+ +    K+ADFG SR         V+G   +    
Sbjct: 142 GMRYLES---LNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRW 198

Query: 103 AGTAGFLNTELTEKSDVDSFEIVILEIIT 131
                 L  + T KSDV +F + + EI+T
Sbjct: 199 MAWESVLLGKFTTKSDVWAFGVTLWEILT 227

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 42.2 bits (99), Expect = 5e-05
 Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 15/98 (15%)

Query: 44  EVC---CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR-------ISPVE 93
           E+C   C G+ YL        I RD+ + N L++++   K++DFG SR        S V 
Sbjct: 104 EMCKDVCEGMAYLES---KQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSV- 159

Query: 94  GGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILEIIT 131
            G+      +     L ++ + KSDV +F +++ E+ +
Sbjct: 160 -GSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYS 196

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 42.4 bits (100), Expect = 5e-05
 Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 16/99 (16%)

Query: 41  GKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMST 100
             E VC   LEYLH      I+ RD+K  NILL+++   KL DFG ++   +   T    
Sbjct: 107 ASEIVC--ALEYLHS---KEIVYRDLKPENILLDKEGHIKLTDFGFAK--KLRDRTW--- 156

Query: 101 TIAGTAGFLNTELTEKSD----VD--SFEIVILEIITGI 133
           T+ GT  +L  E+ +       VD  +  I+I E++ G 
Sbjct: 157 TLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGY 195

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 42.3 bits (99), Expect = 5e-05
 Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 9/95 (9%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+YLH   K   I RD+K+ N+LL+E+   KLADFG +    +        T  GT  +
Sbjct: 113 GLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTFVGTPFW 167

Query: 109 LNTELTEKSDVDSFEIVILEIITGILTVDLSFKGE 143
           +  E+ ++S  D F+  I  +  GI  ++L+ KGE
Sbjct: 168 MAPEVIKQSAYD-FKADIWSL--GITAIELA-KGE 198

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 42.1 bits (99), Expect = 5e-05
 Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 28/147 (19%)

Query: 8   KLTGPLLVELIG---KQKNNALELGFRGNPELVD----QQGK------EEVC---CPGLE 51
           KL+ P LV+L G   +QK   +   F  N  L++    +QGK        +C   C G+E
Sbjct: 55  KLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGME 114

Query: 52  YLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR-------ISPVEGGTHMSTTIAG 104
           YL +   +  I RD+ + N L++     K++DFG +R        S    G       + 
Sbjct: 115 YLER---NSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTS--SSGAKFPVKWSP 169

Query: 105 TAGFLNTELTEKSDVDSFEIVILEIIT 131
              F  ++ + KSDV SF +++ E+ T
Sbjct: 170 PEVFNFSKYSSKSDVWSFGVLMWEVFT 196

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 41.9 bits (98), Expect = 6e-05
 Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)

Query: 34  PELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI---- 89
           P+L+D   +      G+ Y+    +   I RD+++ N+L++E +  K+ADFG +R+    
Sbjct: 103 PKLIDFSAQ---IAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDN 156

Query: 90  --SPVEGGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILEIIT 131
             +  EG        A  A    +  T KSDV SF I++ EI+T
Sbjct: 157 EYTAREGAKFPIKWTAPEAINFGS-FTIKSDVWSFGILLYEIVT 199

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 42.1 bits (99), Expect = 6e-05
 Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 16/92 (17%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAG---- 104
            +EYL    K   I RD+ + N L+ E    K+ADFG SR+  + G T+  T  AG    
Sbjct: 116 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL--MTGDTY--TAHAGAKFP 168

Query: 105 ---TA--GFLNTELTEKSDVDSFEIVILEIIT 131
              TA       + + KSDV +F +++ EI T
Sbjct: 169 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 200

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 42.0 bits (98), Expect = 6e-05
 Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 16/123 (13%)

Query: 14  LVELIGKQKNNALELGFRGNPELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILL 73
           L++ +  +    L L     P+LVD   +      G+ Y+    +   + RD+++ NIL+
Sbjct: 87  LLDFLKGEMGKYLRL-----PQLVDMAAQ---IASGMAYVE---RMNYVHRDLRAANILV 135

Query: 74  NEKVQAKLADFGQSRI-----SPVEGGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILE 128
            E +  K+ADFG +R+          G             L    T KSDV SF I++ E
Sbjct: 136 GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 195

Query: 129 IIT 131
           + T
Sbjct: 196 LTT 198

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 41.9 bits (98), Expect = 6e-05
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 3/54 (5%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTI 102
           GL Y H   +  ++ RD+K  N+L+NE+ + KLADFG +R   +   T+ +  +
Sbjct: 116 GLNYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVV 166

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 42.1 bits (99), Expect = 6e-05
 Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 9/60 (15%)

Query: 52  YLHQGLK-------HPIIQRDMKSTNILLNEKVQAKLADFGQSRI--SPVEGGTHMSTTI 102
           YL Q L+       H ++ RD+K  N+L+N +   KLADFG +R    PV   TH   T+
Sbjct: 105 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL 164

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 42.0 bits (99), Expect = 7e-05
 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 3/51 (5%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMS 99
           GL+YLH      I+ RD+K  N+L+N     K+ DFG +R+   +   HM+
Sbjct: 115 GLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMT 162

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 41.9 bits (98), Expect = 7e-05
 Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 12/95 (12%)

Query: 44  EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA 103
           E+ C GL++LH      I+ RD+K  NILL+     K+ADFG  + + +  G   + T  
Sbjct: 104 EIIC-GLQFLHS---KGIVYRDLKLDNILLDTDGHIKIADFGMCKENML--GDAKTCTFC 157

Query: 104 GTAGFLNTE--LTEK--SDVD--SFEIVILEIITG 132
           GT  ++  E  L +K  + VD  SF +++ E++ G
Sbjct: 158 GTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIG 192

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 41.9 bits (99), Expect = 7e-05
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA 103
              + Y H    H II RD+K  NIL++E    KL DFG +R       + ++  +A
Sbjct: 110 LQAIAYCH---SHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVA 163

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 41.5 bits (97), Expect = 7e-05
 Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 16/123 (13%)

Query: 14  LVELIGKQKNNALELGFRGNPELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILL 73
           L++ +   + +   L     P+L+D   +      G+ ++ Q      I RD+++ NIL+
Sbjct: 87  LLDFLKSDEGSKQPL-----PKLIDFSAQ---IAEGMAFIEQ---RNYIHRDLRAANILV 135

Query: 74  NEKVQAKLADFGQSRI-----SPVEGGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILE 128
           +  +  K+ADFG +R+          G                  T KSDV SF I+++E
Sbjct: 136 SASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLME 195

Query: 129 IIT 131
           I+T
Sbjct: 196 IVT 198

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 41.8 bits (98), Expect = 7e-05
 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 12/90 (13%)

Query: 50  LEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFL 109
           LE+LH   K+ I+ RD+K  NILL+      L DFG S+ +  +  T  + T  GT  +L
Sbjct: 109 LEHLH---KYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKT--TNTFCGTTEYL 163

Query: 110 NTEL-------TEKSDVDSFEIVILEIITG 132
             E+       T+  D  S  +++ E+  G
Sbjct: 164 APEVLLDEKGYTKHVDFWSLGVLVFEMCCG 193

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 41.3 bits (97), Expect = 9e-05
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 11/107 (10%)

Query: 33  NPELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR---- 88
           NP + D  G       G+EYL        + RD+ + N +L+E    K+ADFG +R    
Sbjct: 94  NPTVKDLIGFGLQVAKGMEYLAS---KKFVHRDLAARNCMLDESFTVKVADFGLARDIYD 150

Query: 89  --ISPVEGGTHMSTTIAGTA-GFLNTE-LTEKSDVDSFEIVILEIIT 131
                V   T     +   A   L T+  T KSDV SF +++ E++T
Sbjct: 151 KEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 197

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 41.5 bits (98), Expect = 9e-05
 Identities = 34/101 (33%), Positives = 47/101 (46%), Gaps = 17/101 (16%)

Query: 44  EVCCPGLEYLH-QGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTI 102
           EV    LEYLH  G    I+ RD+K  NILL+E     L+DF  S+ S VE         
Sbjct: 111 EVLL-ALEYLHLLG----IVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALR 165

Query: 103 AGTAG-FLNTELTE-KSDVDSF---------EIVILEIITG 132
            G+    +N+  +E  S+  SF         E +  E+I+G
Sbjct: 166 KGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISG 206

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 41.1 bits (96), Expect = 1e-04
 Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 3/39 (7%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQS 87
           GL +LH    H +I RD+K  N+LL E  + KL DFG S
Sbjct: 133 GLAHLH---AHKVIHRDIKGQNVLLTENAEVKLVDFGVS 168

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 41.4 bits (97), Expect = 1e-04
 Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 14/93 (15%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQA-KLADFGQSRISPVEGGTHMSTTIAGTAG 107
           GL+YLH    + I+ RD+K  N+L+N      K++DFG S+   + G    + T  GT  
Sbjct: 120 GLKYLHD---NQIVHRDIKGDNVLVNTYSGVVKISDFGTSK--RLAGINPCTETFTGTLQ 174

Query: 108 FLNTELTEK--------SDVDSFEIVILEIITG 132
           ++  E+ +K        +D+ S    I+E+ TG
Sbjct: 175 YMAPEVIDKGPRGYGAPADIWSLGCTIVEMATG 207

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 41.3 bits (97), Expect = 1e-04
 Identities = 30/79 (37%), Positives = 37/79 (46%), Gaps = 10/79 (12%)

Query: 44  EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMST--T 101
           E+    L YLH  L   II RD+K  NILL+ +    L DFG  +    EG  H  T  T
Sbjct: 104 EIAS-ALGYLH-SLN--IIYRDLKPENILLDSQGHVVLTDFGLCK----EGIEHSKTTST 155

Query: 102 IAGTAGFLNTELTEKSDVD 120
             GT  +L  E+  K   D
Sbjct: 156 FCGTPEYLAPEVLRKQPYD 174

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 41.1 bits (96), Expect = 1e-04
 Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 5/65 (7%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL +LH   +  II RD+K  N++L+ +   K+ADFG  +   V+G T  + T  GT  +
Sbjct: 113 GLFFLH---RRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVT--TRTFCGTPDY 167

Query: 109 LNTEL 113
           +  E+
Sbjct: 168 IAPEI 172

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 41.2 bits (97), Expect = 1e-04
 Identities = 19/40 (47%), Positives = 27/40 (67%), Gaps = 3/40 (7%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR 88
           GL Y+H   ++ I+ RDMK+ NIL+ +    KLADFG +R
Sbjct: 131 GLYYIH---RNKILHRDMKAANILITKDGILKLADFGLAR 167

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 41.2 bits (96), Expect = 1e-04
 Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 12/91 (13%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQS-RISPV-EGGTHMSTTIAGTA 106
           G+ YLH  +   I+ RD+K  NIL +     KL DFG S RI  +   GT +  ++ GT 
Sbjct: 118 GVSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIK-SVTGTP 173

Query: 107 GFLNTELT------EKSDVDSFEIVILEIIT 131
            +++ E+        K+DV S    ++E++T
Sbjct: 174 YWMSPEVISGEGYGRKADVWSVACTVVEMLT 204

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 41.1 bits (97), Expect = 1e-04
 Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 4/53 (7%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRIS-PVEGGTHMST 100
           GL+Y+H      ++ RD+K +N+LLN     K+ DFG +RI+ P    T   T
Sbjct: 118 GLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLT 167

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 40.8 bits (95), Expect = 1e-04
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 12/91 (13%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQS-RISPV-EGGTHMSTTIAGTA 106
           G+ YLH  +   I+ RD+K  NIL +     KL DFG S R+  +   GT +  ++ GT 
Sbjct: 118 GMSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIR-SVTGTP 173

Query: 107 GFLNTELT------EKSDVDSFEIVILEIIT 131
            +++ E+        K+DV S    ++E++T
Sbjct: 174 YWMSPEVISGEGYGRKADVWSLGCTVVEMLT 204

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 41.2 bits (97), Expect = 1e-04
 Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 3/47 (6%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGG 95
           GL+Y+H      ++ RD+K +N+LLN     K+ DFG +R +  +G 
Sbjct: 120 GLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGD 163

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 41.2 bits (96), Expect = 1e-04
 Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 15/94 (15%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMST--TIAGTA 106
            L+YLH G    I+ RD+K  N++L++    K+ DFG  +    EG T  +T  T  GT 
Sbjct: 107 ALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCK----EGITDAATMKTFCGTP 159

Query: 107 GFLNTELTEKSD----VD--SFEIVILEIITGIL 134
            +L  E+ E +D    VD     +V+ E++ G L
Sbjct: 160 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 193

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 40.9 bits (96), Expect = 2e-04
 Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 10/92 (10%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
           C G+EYL    ++  + RD+ + NIL+  + + K+ DFG +++ P +   +       + 
Sbjct: 118 CKGMEYL-GSKRY--VHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESP 174

Query: 107 GFLNT--ELTE-----KSDVDSFEIVILEIIT 131
            F      LTE      SDV SF +V+ E+ T
Sbjct: 175 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 206

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional

 Score = 41.0 bits (96), Expect = 2e-04
 Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 44/155 (28%)

Query: 50  LEYLH-QGLKHPIIQRDMKSTNILLNEKVQAKLADFGQ------SRISPVEGGTHMSTTI 102
           ++Y+H +G    II RD+K+ N+L+N      L DFG       S  +P   G      I
Sbjct: 273 IDYIHGEG----IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYG------I 322

Query: 103 AGTAGFLNTELTEKSDVDSFEIVILEIITGILTVDLSFKGEFDIISVEKAVEIA-MASVS 161
           AGT            D ++ E++  +  T   +VD+   G   ++  E AV  A + S S
Sbjct: 323 AGTV-----------DTNAPEVLAGDPYTP--SVDIWSAG---LVIFEAAVHTASLFSAS 366

Query: 162 SKVNRRPLMNQVVMVREQG----------SGSRIT 186
               RRP   Q++ +  Q           +GSR+ 
Sbjct: 367 RGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLV 401

Length = 461

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 40.8 bits (95), Expect = 2e-04
 Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 3/54 (5%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTI 102
           GL Y+HQ     I+ RD+K  N+L+++  + KLADFG +R   V   T+ +  +
Sbjct: 115 GLSYIHQ---RYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEVV 165

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 40.8 bits (95), Expect = 2e-04
 Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 6/86 (6%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G++YL Q      I RD+ + NIL+ E   AK+ADFG SR   V     M          
Sbjct: 124 GMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAI 180

Query: 109 --LNTEL-TEKSDVDSFEIVILEIIT 131
             LN  + T  SDV S+ +++ EI++
Sbjct: 181 ESLNYSVYTTNSDVWSYGVLLWEIVS 206

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 41.0 bits (97), Expect = 2e-04
 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 3/41 (7%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI 89
           GL+YLH      +I RD+K +NIL+N     K+ DFG +R 
Sbjct: 115 GLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARG 152

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 40.9 bits (95), Expect = 2e-04
 Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 13/94 (13%)

Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFG-QSRISPVEGGTHMSTTIAG 104
           C   LE+LH    + +I RD+KS N+LL      KL DFG  ++I+P +      +T+ G
Sbjct: 124 CLQALEFLH---ANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS---KRSTMVG 177

Query: 105 TAGFLNTELTE------KSDVDSFEIVILEIITG 132
           T  ++  E+        K D+ S  I+ +E++ G
Sbjct: 178 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEG 211

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 40.7 bits (95), Expect = 2e-04
 Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 4/84 (4%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR-ISPVEGGTHMSTTIAGT 105
           C  +EYL     +  + RD+ + N+L++E   AK++DFG ++  S  +    +       
Sbjct: 112 CEAMEYLE---ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAP 168

Query: 106 AGFLNTELTEKSDVDSFEIVILEI 129
                 + + KSDV SF I++ EI
Sbjct: 169 EALREKKFSTKSDVWSFGILLWEI 192

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 40.9 bits (96), Expect = 2e-04
 Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 6/58 (10%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR---ISPVEGGTHMSTTIA 103
           GL+Y+H      ++ RD+K  N+L+N   + K+ DFG +R    +P E    M+  +A
Sbjct: 117 GLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVA 171

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 3/41 (7%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI 89
            + + H   KH  I RD+K  NIL+ ++ Q KL DFG +RI
Sbjct: 112 AVNFCH---KHNCIHRDVKPENILITKQGQIKLCDFGFARI 149

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 40.6 bits (95), Expect = 2e-04
 Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 21/134 (15%)

Query: 54  HQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTEL 113
           H   KH +I RD+KS NILL      KL DFG S++        +  T  GT  ++  E+
Sbjct: 158 HVHSKH-MIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEI 216

Query: 114 ------TEKSDVDSFEIVILEIIT------GILTVDLSFK---GEFD----IISVEKAVE 154
                 ++K+D+ S  +++ E++T      G    ++  K   G +D     IS E   E
Sbjct: 217 WRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDPLPPSISPEMQ-E 275

Query: 155 IAMASVSSKVNRRP 168
           I  A +SS   RRP
Sbjct: 276 IVTALLSSDPKRRP 289

Length = 496

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 40.5 bits (95), Expect = 2e-04
 Identities = 15/40 (37%), Positives = 28/40 (70%), Gaps = 3/40 (7%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR 88
           G+ + H+   + ++ RD+K  N+L+N++ + KLADFG +R
Sbjct: 112 GIAFCHE---NRVLHRDLKPQNLLINKRGELKLADFGLAR 148

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 40.4 bits (94), Expect = 2e-04
 Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 7/72 (9%)

Query: 44  EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA 103
           E+CC GLE LHQ     I+ RD+K  NILL++    +++D G +   P EG T       
Sbjct: 110 EICC-GLEDLHQ---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVP-EGQTIKGRV-- 162

Query: 104 GTAGFLNTELTE 115
           GT G++  E+ +
Sbjct: 163 GTVGYMAPEVVK 174

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 40.2 bits (94), Expect = 2e-04
 Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 12/95 (12%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQ-AKLADFGQS--RISPVEGGTHMSTTIA 103
             GL YLH+   + II RD+K  N+L++   Q  ++ADFG +    +   G       + 
Sbjct: 113 LRGLSYLHE---NQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLL 169

Query: 104 GTAGFLNTELT------EKSDVDSFEIVILEIITG 132
           GT  F+  E+          DV S   VI+E+ T 
Sbjct: 170 GTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATA 204

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 40.4 bits (94), Expect = 2e-04
 Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 6/86 (6%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G++YL +      I RD+ + N+L+ E + +K+ADFG SR   V     M          
Sbjct: 131 GMQYLSE---KQFIHRDLAARNVLVGENLASKIADFGLSRGEEVYVKKTMGRLPVRWMAI 187

Query: 109 --LNTEL-TEKSDVDSFEIVILEIIT 131
             LN  + T KSDV SF +++ EI++
Sbjct: 188 ESLNYSVYTTKSDVWSFGVLLWEIVS 213

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 40.4 bits (94), Expect = 2e-04
 Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 10/85 (11%)

Query: 32  GNPELVDQQG---KEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR 88
           GNP   +Q+      E+CC GLE L    +  I+ RD+K  NILL+++   +++D G + 
Sbjct: 95  GNPGFDEQRAIFYAAELCC-GLEDLQ---RERIVYRDLKPENILLDDRGHIRISDLGLAV 150

Query: 89  ISPVEGGTHMSTTIAGTAGFLNTEL 113
             P EG T       GT G++  E+
Sbjct: 151 QIP-EGETVRGRV--GTVGYMAPEV 172

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 40.1 bits (93), Expect = 3e-04
 Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 13/94 (13%)

Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFG-QSRISPVEGGTHMSTTIAG 104
           C   L++LH    + +I RD+KS NILL      KL DFG  ++I+P +      +T+ G
Sbjct: 124 CLQALDFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS---KRSTMVG 177

Query: 105 TAGFLNTELTE------KSDVDSFEIVILEIITG 132
           T  ++  E+        K D+ S  I+ +E++ G
Sbjct: 178 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEG 211

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 40.1 bits (94), Expect = 3e-04
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 3/40 (7%)

Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFG 85
               L +LH      +I RD+KS +ILL    + KL+DFG
Sbjct: 124 VLKALSFLHA---QGVIHRDIKSDSILLTSDGRVKLSDFG 160

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 40.1 bits (94), Expect = 3e-04
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 13/91 (14%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL +LH      II RD+K  N++L+ +   K+ADFG  + +   G T  + T  GT  +
Sbjct: 113 GLFFLH---SKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKT--TRTFCGTPDY 167

Query: 109 LNTELT-----EKSDVD--SFEIVILEIITG 132
           +  E+       KS VD  +F +++ E++ G
Sbjct: 168 IAPEIIAYQPYGKS-VDWWAFGVLLYEMLAG 197

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 40.0 bits (93), Expect = 3e-04
 Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 11/75 (14%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL YLH   K   + RD+K  NILL +    KLADFG S          ++ TIA    F
Sbjct: 118 GLYYLHSKGK---MHRDIKGANILLTDNGHVKLADFGVS--------AQITATIAKRKSF 166

Query: 109 LNTELTEKSDVDSFE 123
           + T      +V + E
Sbjct: 167 IGTPYWMAPEVAAVE 181

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 40.1 bits (94), Expect = 3e-04
 Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 12/93 (12%)

Query: 47  CPGLEYLH-QGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGT 105
           C G++YL  Q   H    RD+ + NIL+  +   K++DFG +++ P +   +       +
Sbjct: 119 CKGMDYLGSQRYIH----RDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGES 174

Query: 106 AGF------LNT-ELTEKSDVDSFEIVILEIIT 131
             F      L T + +  SDV SF + + E+ T
Sbjct: 175 PIFWYAPECLRTSKFSSASDVWSFGVTLYELFT 207

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 39.7 bits (93), Expect = 3e-04
 Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 7/87 (8%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI--SPVEGGTHMSTTIAGTA 106
           G+ YL +      I RD+ + NIL+ E +  K+ADFG +R+    V   +        TA
Sbjct: 116 GMAYLEE---QNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWTA 172

Query: 107 --GFLNTELTEKSDVDSFEIVILEIIT 131
                +   + KSDV SF I++ E+ T
Sbjct: 173 PEAASHGTFSTKSDVWSFGILLYEMFT 199

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 39.7 bits (92), Expect = 4e-04
 Identities = 20/37 (54%), Positives = 26/37 (70%), Gaps = 3/37 (8%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFG 85
           GL+YLH   K   I RD+K+ N+LL+E  + KLADFG
Sbjct: 113 GLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFG 146

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 39.6 bits (93), Expect = 4e-04
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 4/42 (9%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR 88
              L+++H+   + I  RD+K  NIL+ + +  KLADFG  R
Sbjct: 110 LKSLDHMHR---NGIFHRDIKPENILIKDDI-LKLADFGSCR 147

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 39.7 bits (92), Expect = 4e-04
 Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 13/94 (13%)

Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFG-QSRISPVEGGTHMSTTIAG 104
           C   LE+LH    + +I RD+KS NILL      KL DFG  ++I+P +      +T+ G
Sbjct: 125 CLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS---KRSTMVG 178

Query: 105 TAGFLNTELTE------KSDVDSFEIVILEIITG 132
           T  ++  E+        K D+ S  I+ +E+I G
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 39.4 bits (92), Expect = 4e-04
 Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 13/92 (14%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
             GL+ LH+     I+ RD+KS NILL      K+ D G   IS V     M+ T  GT 
Sbjct: 113 LRGLQALHE---QKILHRDLKSANILLVANDLVKIGDLG---ISKVLKKN-MAKTQIGTP 165

Query: 107 GFLNTEL------TEKSDVDSFEIVILEIITG 132
            ++  E+      + KSD+ S   ++ E+ T 
Sbjct: 166 HYMAPEVWKGRPYSYKSDIWSLGCLLYEMATF 197

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 39.6 bits (92), Expect = 4e-04
 Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 12/91 (13%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR--ISPVEGGTHMSTTIAGTA 106
           G+ YLH  +   I+ RD+K  NIL +     KL DFG S+   +    GT M  ++ GT 
Sbjct: 118 GVSYLHSNM---IVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMK-SVTGTP 173

Query: 107 GFLNTELT------EKSDVDSFEIVILEIIT 131
            +++ E+        K+D+ S    ++E++T
Sbjct: 174 YWMSPEVISGEGYGRKADIWSVGCTVVEMLT 204

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 39.6 bits (92), Expect = 4e-04
 Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 19/108 (17%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
           C  L +LH+     II RD+K  N+LL+     KL D+G  +     G T  ++T  GT 
Sbjct: 106 CIALNFLHE---RGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDT--TSTFCGTP 160

Query: 107 GFLNTELTEKSD----VD--SFEIVILEIITGILTVDLSFKGEFDIIS 148
            ++  E+    +    VD  +  +++ E++ G        +  FDII+
Sbjct: 161 NYIAPEILRGEEYGFSVDWWALGVLMFEMMAG--------RSPFDIIT 200

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 39.4 bits (92), Expect = 4e-04
 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 9/78 (11%)

Query: 31  RGNPELVDQQGKEEVC---CPGLEYLHQGLKHPIIQRDMKSTNILLN-EKVQAKLADFGQ 86
           RG    +  +  +        G+ + H   KH ++ RD+K  N+L++ +K   K+AD G 
Sbjct: 101 RGPGRPLPAKTIKSFMYQLLKGVAHCH---KHGVMHRDLKPQNLLVDKQKGLLKIADLGL 157

Query: 87  SR--ISPVEGGTHMSTTI 102
            R    PV+  TH   T+
Sbjct: 158 GRAFSIPVKSYTHEIVTL 175

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 39.6 bits (92), Expect = 5e-04
 Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 6/86 (6%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G++YL Q      I RD+ + NIL+ E   AK+ADFG SR   V     M          
Sbjct: 136 GMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAI 192

Query: 109 --LNTEL-TEKSDVDSFEIVILEIIT 131
             LN  + T  SDV S+ +++ EI++
Sbjct: 193 ESLNYSVYTTNSDVWSYGVLLWEIVS 218

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 39.2 bits (92), Expect = 5e-04
 Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 3/40 (7%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR 88
           GL+Y+H      II RD+K +NI +NE  + K+ DFG +R
Sbjct: 130 GLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFGLAR 166

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 39.1 bits (91), Expect = 6e-04
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 11/89 (12%)

Query: 50  LEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFL 109
           L +LH      II RD+K  N+LL+ +   KLADFG  +     G T  ++T  GT  ++
Sbjct: 109 LMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKT--TSTFCGTPDYI 163

Query: 110 NTELTEKS----DVD--SFEIVILEIITG 132
             E+ ++      VD  +  +++ E++ G
Sbjct: 164 APEILQEMLYGPSVDWWAMGVLLYEMLCG 192

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 39.0 bits (91), Expect = 6e-04
 Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 12/91 (13%)

Query: 50  LEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFL 109
           L++LHQ L   II RD+K  NILL+ +    L DFG S+   +      + +  GT  ++
Sbjct: 118 LDHLHQ-LG--IIYRDIKLENILLDSEGHVVLTDFGLSKEF-LAEEEERAYSFCGTIEYM 173

Query: 110 NTELTEKSD------VD--SFEIVILEIITG 132
             E+           VD  S  ++  E++TG
Sbjct: 174 APEVIRGGSGGHDKAVDWWSLGVLTFELLTG 204

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 39.2 bits (91), Expect = 6e-04
 Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 14/92 (15%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAG---- 104
           G++YL        + RD+ + NIL+N  ++ K++DFG SR+  +E     + T +G    
Sbjct: 119 GMKYLSD---MNYVHRDLAARNILVNSNLECKVSDFGLSRV--LEDDPEGTYTTSGGKIP 173

Query: 105 ---TA--GFLNTELTEKSDVDSFEIVILEIIT 131
              TA       + T  SDV SF IV+ E+++
Sbjct: 174 IRWTAPEAIAYRKFTSASDVWSFGIVMWEVMS 205

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 39.3 bits (91), Expect = 6e-04
 Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 3/52 (5%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMST 100
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T
Sbjct: 132 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT 180

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 39.2 bits (91), Expect = 7e-04
 Identities = 36/144 (25%), Positives = 56/144 (38%), Gaps = 24/144 (16%)

Query: 9   LTGPLLVELIGKQKNNALE--------------LGFRGNPELVDQQGKEEVCCPGLEYLH 54
           +  P +++L G    N                 L  + N  + D    E      ++YLH
Sbjct: 140 INHPSIIQLKGTFTYNKFTCLILPRYKTDLYCYLAAKRNIAICDILAIERSVLRAIQYLH 199

Query: 55  QGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTELT 114
           +   + II RD+K+ NI +N      L DFG +   PV+   +     AGT      EL 
Sbjct: 200 E---NRIIHRDIKAENIFINHPGDVCLGDFGAA-CFPVDINANKYYGWAGTIATNAPELL 255

Query: 115 EKS------DVDSFEIVILEIITG 132
            +       D+ S  IV+ E+ T 
Sbjct: 256 ARDPYGPAVDIWSAGIVLFEMATC 279

Length = 391

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 38.6 bits (90), Expect = 7e-04
 Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 11/91 (12%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
              L YLH+  +  I+ RD+   NI+L E  +  + DFG ++    E      T++ GT 
Sbjct: 123 VLALRYLHKEKR--IVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPESKL---TSVVGTI 177

Query: 107 GFLNTEL------TEKSDVDSFEIVILEIIT 131
            +   E+       EK+DV +F  ++ ++ T
Sbjct: 178 LYSCPEIVKNEPYGEKADVWAFGCILYQMCT 208

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 38.6 bits (90), Expect = 8e-04
 Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 6/57 (10%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQA-KLADFGQSRI--SPVEGGTHMSTTI 102
           G+ Y H    H ++ RD+K  N+L++ +  A KLADFG +R    PV   TH   T+
Sbjct: 114 GIAYCHS---HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTL 167

Length = 294

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 38.7 bits (90), Expect = 8e-04
 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 3/45 (6%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVE 93
           GL+Y+H      II RD+K  N+ +NE  + K+ DFG +R +  E
Sbjct: 129 GLKYIH---SAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAE 170

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 38.6 bits (90), Expect = 9e-04
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 3/40 (7%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR 88
           GL  LH   K   + RD+   NI +N K   K+ADFG +R
Sbjct: 131 GLNVLH---KWYFMHRDLSPANIFINSKGICKIADFGLAR 167

Length = 335

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 38.7 bits (90), Expect = 0.001
 Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 12/93 (12%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAG-- 104
           C G+ YLH   +H  I RD+ + N+LL+     K+ DFG ++  P EG  +      G  
Sbjct: 117 CEGMAYLHS--QH-YIHRDLAARNVLLDNDRLVKIGDFGLAKAVP-EGHEYYRVREDGDS 172

Query: 105 ------TAGFLNTELTEKSDVDSFEIVILEIIT 131
                        + +  SDV SF + + E++T
Sbjct: 173 PVFWYAVECLKENKFSYASDVWSFGVTLYELLT 205

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 38.4 bits (89), Expect = 0.001
 Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 15/93 (16%)

Query: 50  LEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMST--TIAGTAG 107
           LEYLH      ++ RD+K  N++L++    K+ DFG  +    EG +  +T  T  GT  
Sbjct: 108 LEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDGATMKTFCGTPE 160

Query: 108 FLNTELTEKSD----VD--SFEIVILEIITGIL 134
           +L  E+ E +D    VD     +V+ E++ G L
Sbjct: 161 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 193

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 38.5 bits (89), Expect = 0.001
 Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 11/63 (17%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL YLH   K   + RD+K  NILL +    KLADFG +          ++ TIA    F
Sbjct: 118 GLAYLHSKGK---MHRDIKGANILLTDNGDVKLADFGVA--------AKITATIAKRKSF 166

Query: 109 LNT 111
           + T
Sbjct: 167 IGT 169

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 38.1 bits (89), Expect = 0.001
 Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 3/40 (7%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR 88
           G+E+ H    H II RD+K  NIL+++    KL DFG +R
Sbjct: 112 GIEFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFAR 148

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 38.2 bits (89), Expect = 0.001
 Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 23/96 (23%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTH-----MSTT-- 101
           G+E+L        I RD+ + N+L+ E    K+ADFG +R        H       TT  
Sbjct: 144 GMEFLAS---KKCIHRDLAARNVLVTEDHVMKIADFGLAR------DIHHIDYYRKTTNG 194

Query: 102 ------IAGTAGFLNTELTEKSDVDSFEIVILEIIT 131
                 +A  A F     T +SDV SF +++ EI T
Sbjct: 195 RLPVKWMAPEALFDRV-YTHQSDVWSFGVLLWEIFT 229

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 38.2 bits (89), Expect = 0.001
 Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 15/92 (16%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPV-------EGGTHMSTT 101
           G+ YL +     ++ RD+ + N+L+      K+ DFG +++  V       EGG      
Sbjct: 121 GMSYLEE---KRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGG---KVP 174

Query: 102 IAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
           I   A    L+   T KSDV S+ + + E++T
Sbjct: 175 IKWMALESILHRIYTHKSDVWSYGVTVWELMT 206

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 38.0 bits (88), Expect = 0.001
 Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 21/95 (22%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTH----------- 97
           G+EYL        I RD+ + N+L+ E    K+ADFG +R      G H           
Sbjct: 146 GMEYLES---RRCIHRDLAARNVLVTEDNVMKIADFGLAR------GVHDIDYYKKTSNG 196

Query: 98  -MSTTIAGTAGFLNTELTEKSDVDSFEIVILEIIT 131
            +           +   T +SDV SF I++ EI T
Sbjct: 197 RLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFT 231

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 38.1 bits (88), Expect = 0.001
 Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 21/95 (22%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFG------------QSRISPVEGGT 96
           G+EYL        I RD+ + N +LNE +   +ADFG            Q RI+      
Sbjct: 124 GMEYLSS---KSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIA------ 174

Query: 97  HMSTTIAGTAGFLNTELTEKSDVDSFEIVILEIIT 131
            M           +   T KSDV SF + + EI T
Sbjct: 175 KMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIAT 209

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 38.0 bits (88), Expect = 0.001
 Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 10/85 (11%)

Query: 32  GNPELVDQQG---KEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR 88
           GNP   +++      E+ C GLE LH+      + RD+K  NILL++    +++D G + 
Sbjct: 95  GNPGFEEERALFYAAEILC-GLEDLHR---ENTVYRDLKPENILLDDYGHIRISDLGLAV 150

Query: 89  ISPVEGGTHMSTTIAGTAGFLNTEL 113
             P EG +       GT G++  E+
Sbjct: 151 KIP-EGESIRGRV--GTVGYMAPEV 172

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 38.1 bits (88), Expect = 0.002
 Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 10/92 (10%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            L+YLH   +  ++ RD+K  N++L++    K+ DFG  +    +G T    T  GT  +
Sbjct: 107 ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKTFCGTPEY 162

Query: 109 LNTELTEKSD----VD--SFEIVILEIITGIL 134
           L  E+ E +D    VD     +V+ E++ G L
Sbjct: 163 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 194

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 38.0 bits (88), Expect = 0.002
 Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 6/77 (7%)

Query: 44  EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA 103
           EV    + YLH      II RD+K  NILL+ +    L DFG  +       T  ++T  
Sbjct: 104 EVAS-AIGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEET--TSTFC 157

Query: 104 GTAGFLNTELTEKSDVD 120
           GT  +L  E+  K   D
Sbjct: 158 GTPEYLAPEVLRKEPYD 174

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 38.0 bits (88), Expect = 0.002
 Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 11/90 (12%)

Query: 50  LEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFL 109
           LE LH   K  +I RD+K  NILL+ +    L DFG  +++  +     + T  GT  +L
Sbjct: 106 LENLH---KFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD--DDKTNTFCGTPEYL 160

Query: 110 NTEL------TEKSDVDSFEIVILEIITGI 133
             EL      T+  D  +  +++ E++TG+
Sbjct: 161 APELLLGHGYTKAVDWWTLGVLLYEMLTGL 190

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 37.7 bits (87), Expect = 0.002
 Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 9/89 (10%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR------ISPVEGGTHMSTTI 102
           G+EYL     H  + +D+ + NIL+ E++  K++D G SR         V+  + +    
Sbjct: 136 GMEYLSS---HFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRW 192

Query: 103 AGTAGFLNTELTEKSDVDSFEIVILEIIT 131
                 +  + +  SD+ SF +V+ EI +
Sbjct: 193 MPPEAIMYGKFSSDSDIWSFGVVLWEIFS 221

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 38.0 bits (88), Expect = 0.002
 Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 3/40 (7%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR 88
           GL+Y+H      II RD+K  N+ +NE  + K+ DFG +R
Sbjct: 130 GLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLAR 166

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 37.4 bits (87), Expect = 0.002
 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR 88
           G+EYL     H  + RD+ + N L+ E +  K++DFG SR
Sbjct: 136 GMEYLSS---HHFVHRDLAARNCLVGEGLTVKISDFGLSR 172

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 37.8 bits (88), Expect = 0.002
 Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 4/42 (9%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLN-EKVQAKLADFGQSRI 89
           GL+Y+H      ++ RD+K  N+ +N E +  K+ DFG +RI
Sbjct: 126 GLKYIHSA---NVLHRDLKPANVFINTEDLVLKIGDFGLARI 164

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 37.4 bits (87), Expect = 0.002
 Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 9/60 (15%)

Query: 52  YLHQGL-------KHPIIQRDMKSTNILLNEKVQAKLADFGQSRI--SPVEGGTHMSTTI 102
           YL+Q L          ++ RD+K  N+L++ K   KLADFG +R    PV   TH   T+
Sbjct: 106 YLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTHEVVTL 165

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 37.7 bits (87), Expect = 0.002
 Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 10/88 (11%)

Query: 61  IIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTELTE----- 115
           ++ RD+KS NI L      KL DFG S+         ++++  GT  +L  EL E     
Sbjct: 190 MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYS 249

Query: 116 -KSDVDSFEIVILEIITGILTVDLSFKG 142
            K+D+ S  +++ E    +LT+   FKG
Sbjct: 250 KKADMWSLGVILYE----LLTLHRPFKG 273

Length = 478

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 37.5 bits (87), Expect = 0.002
 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 3/40 (7%)

Query: 50  LEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI 89
           LEYLH    + I+ RD+K  N+L+      KL DFG S+I
Sbjct: 114 LEYLHN---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKI 150

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 37.3 bits (87), Expect = 0.002
 Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 14/78 (17%)

Query: 11  GPLLVELIGKQKNNALELGFRGNPELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTN 70
           GPLL  L  +++    +L      EL  Q     V   G+ YL    KH  + RD+ + N
Sbjct: 80  GPLLKYLKKRREIPVSDL-----KELAHQ-----VAM-GMAYLE--SKH-FVHRDLAARN 125

Query: 71  ILLNEKVQAKLADFGQSR 88
           +LL  + QAK++DFG SR
Sbjct: 126 VLLVNRHQAKISDFGMSR 143

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 37.6 bits (87), Expect = 0.002
 Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 3/54 (5%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTI 102
           GL Y+H   +H I+ RD+K  N+L++   + KLADFG +R   +   T+ S  +
Sbjct: 115 GLAYIHG--QH-ILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSEVV 165

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 37.7 bits (87), Expect = 0.002
 Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 14/99 (14%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            LE+LH   K  II RD+K  NILL+      L DFG S+    E     + +  GT  +
Sbjct: 117 ALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSK-EFHEDEVERAYSFCGTIEY 172

Query: 109 LNTELTEKSD------VD--SFEIVILEIITGI--LTVD 137
           +  ++    D      VD  S  +++ E++TG    TVD
Sbjct: 173 MAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVD 211

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 37.3 bits (86), Expect = 0.002
 Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 9/94 (9%)

Query: 45  VCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFG---------QSRISPVEGG 95
           +C   LE L       II RD+K+ N+LL      KLADFG         Q R S +   
Sbjct: 115 ICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSFIGTP 174

Query: 96  THMSTTIAGTAGFLNTELTEKSDVDSFEIVILEI 129
             M+  +       +T    K+D+ S  I ++E+
Sbjct: 175 YWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 208

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 37.2 bits (86), Expect = 0.002
 Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 13/94 (13%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEG--GTH--MSTTIAG 104
           G+ YLH    + ++ RD+K  N++L      KL DFG +R     G  GTH  M  ++ G
Sbjct: 114 GVAYLHN---NCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHG 170

Query: 105 TAGFLNTELT------EKSDVDSFEIVILEIITG 132
           T  ++  E+        KSD+ S    + E+ TG
Sbjct: 171 TPYWMAPEVINESGYGRKSDIWSIGCTVFEMATG 204

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 37.3 bits (86), Expect = 0.003
 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 6/76 (7%)

Query: 62  IQRDMKSTNILLNEKVQAKLADFGQSR------ISPVEGGTHMSTTIAGTAGFLNTELTE 115
           + RD+ + N L+ + +  K+ DFG SR         V G T +          L  + T 
Sbjct: 144 VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTT 203

Query: 116 KSDVDSFEIVILEIIT 131
           +SD+ SF +V+ EI T
Sbjct: 204 ESDIWSFGVVLWEIFT 219

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 37.3 bits (86), Expect = 0.003
 Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 3/52 (5%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMST 100
           GL+Y+H      II RD+K +N+ +NE  + ++ DFG +R +  E   +++T
Sbjct: 130 GLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGLARQADDEMTGYVAT 178

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 37.4 bits (86), Expect = 0.003
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)

Query: 62  IQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTELTE 115
           + RD+K  NIL++     +LADFG S +  +E GT  S+   GT  +++ E+ +
Sbjct: 124 VHRDIKPDNILMDMNGHIRLADFG-SCLKLMEDGTVQSSVAVGTPDYISPEILQ 176

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 36.7 bits (85), Expect = 0.003
 Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 17/75 (22%)

Query: 44  EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHM--STT 101
           E+ C GLE LH   +  I+ RD+K  NILL+        D+G  RIS +     +    T
Sbjct: 110 EITC-GLEDLH---RERIVYRDLKPENILLD--------DYGHIRISDLGLAVEIPEGET 157

Query: 102 I---AGTAGFLNTEL 113
           I    GT G++  E+
Sbjct: 158 IRGRVGTVGYMAPEV 172

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 36.5 bits (84), Expect = 0.004
 Identities = 34/88 (38%), Positives = 46/88 (52%), Gaps = 13/88 (14%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMST------TI 102
           G+EYL    KH  I RD+ + N L+ EK   K++DFG SR    E G + ST       +
Sbjct: 106 GMEYLES--KH-CIHRDLAARNCLVTEKNVLKISDFGMSREE--EDGVYASTGGMKQIPV 160

Query: 103 AGTA-GFLN-TELTEKSDVDSFEIVILE 128
             TA   LN    + +SDV SF I++ E
Sbjct: 161 KWTAPEALNYGRYSSESDVWSFGILLWE 188

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 36.9 bits (85), Expect = 0.004
 Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 5/72 (6%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            L YLH  +   I+ RD+K  NILL+ +    L DFG  +    +  T  +TT  GT  +
Sbjct: 108 ALGYLHS-IN--IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDT--TTTFCGTPEY 162

Query: 109 LNTELTEKSDVD 120
           L  E+  K   D
Sbjct: 163 LAPEVIRKQPYD 174

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 36.5 bits (84), Expect = 0.004
 Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 3/39 (7%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQS 87
           GL++LH    + II RD+K  NILL  +   KL DFG S
Sbjct: 140 GLQHLHN---NRIIHRDVKGNNILLTTEGGVKLVDFGVS 175

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 36.7 bits (85), Expect = 0.004
 Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 19/107 (17%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
              L +LH+     II RD+K  N+LL+ +   KL D+G  +     G T  ++T  GT 
Sbjct: 106 SLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDT--TSTFCGTP 160

Query: 107 GFLNTELTEKSDVD------SFEIVILEIITGILTVDLSFKGEFDII 147
            ++  E+    D        +  +++ E++ G        +  FDI+
Sbjct: 161 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAG--------RSPFDIV 199

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 36.5 bits (84), Expect = 0.004
 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 15/72 (20%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQ----SRISPVEGGTHMSTTIAG 104
           GLE++H      ++ RD+K  NILL+E    +++D G     S+  P     H S    G
Sbjct: 109 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP-----HASV---G 157

Query: 105 TAGFLNTELTEK 116
           T G++  E+ +K
Sbjct: 158 THGYMAPEVLQK 169

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 36.5 bits (85), Expect = 0.004
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 7/46 (15%)

Query: 43  EEVCCPGLEYLHQ-GLKHPIIQRDMKSTNILLNEKVQAKLADFGQS 87
           E V    L+ +H+ G  H    RD+K  NIL++     KLADFG  
Sbjct: 109 ELVLA--LDSVHKLGFIH----RDIKPDNILIDADGHIKLADFGLC 148

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 36.5 bits (84), Expect = 0.004
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 15/101 (14%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL +LH      II RD+K  N++L+ +   K+ADFG  + +  +G T  + T  GT  +
Sbjct: 113 GLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVT--TKTFCGTPDY 167

Query: 109 LNTELT------EKSDVDSFEIVILEIITGILTVDLSFKGE 143
           +  E+       +  D  +F +++ E++ G       F+GE
Sbjct: 168 IAPEIIAYQPYGKSVDWWAFGVLLYEMLAG----QAPFEGE 204

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	188
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.98
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.98
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.98
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.98
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.98
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.98
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.98
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.98
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.98
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.98
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.98
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.98
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.98
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.98
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.98
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.98
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.98
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.98
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.98
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.98
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.98
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.98
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.98
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.98
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.98
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.98
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.98
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.98
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.98
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.98
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.98
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.97
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.97
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.97
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.97
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.97
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.97
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.97
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.97
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.97
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.97
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.97
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.97
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.97
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.97
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.97
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.97
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.97
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.97
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.97
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.97
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.97
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.97
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.97
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.97
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.97
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.97
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.97
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.97
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.97
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.97
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.97
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.97
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.97
PTZ00283	496	serine/threonine protein kinase; Provisional	99.97
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.97
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.97
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.97
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.97
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.97
PHA03212	391	serine/threonine kinase US3; Provisional	99.97
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.97
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.97
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.97
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.97
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.97
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.97
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.97
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.97
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.97
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.97
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.97
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.97
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.97
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.97
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.97
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.97
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.97
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.97
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.97
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.97
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.97
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.97
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.97
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.97
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.97
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.97
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.97
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.97
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.97
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.97
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.97
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.97
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.97
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.97
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.97
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.97
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.97
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.97
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.97
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.97
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.97
PHA03207	392	serine/threonine kinase US3; Provisional	99.97
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.97
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.97
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.97
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.97
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.97
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.97
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.97
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.97
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.97
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.97
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.97
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.97
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.97
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.97
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.97
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.97
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.97
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.97
PTZ00036	440	glycogen synthase kinase; Provisional	99.97
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.97
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.97
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.97
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.97
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.97
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.97
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.97
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.97
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.97
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.97
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.97
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.97
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.97
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.97
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.97
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.97
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.97
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.97
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.97
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.97
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.97
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.97
PHA03211	461	serine/threonine kinase US3; Provisional	99.97
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.97
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.97
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.97
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.97
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.97
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.97
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.97
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.97
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.97
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.97
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.97
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.97
PHA03209	357	serine/threonine kinase US3; Provisional	99.97
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.97
KOG0610	459	consensus Putative serine/threonine protein kinase	99.97
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.97
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.97
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.97
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.97
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.97
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.97
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.97
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.97
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.97
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.97
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.96
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.96
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.96
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.96
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.96
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.96
KOG0586	596	consensus Serine/threonine protein kinase [General	99.96
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.96
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.96
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.96
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.96
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.96
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.96
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.96
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.96
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.96
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.96
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.96
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.96
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.96
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.96
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.96
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.96
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.96
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.96
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.96
KOG0584	632	consensus Serine/threonine protein kinase [General	99.96
KOG0605	550	consensus NDR and related serine/threonine kinases	99.96
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.96
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.96
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.96
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.96
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.96
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.96
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.96
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.96
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.96
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.96
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.96
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.96
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.96
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.96
PHA03210	501	serine/threonine kinase US3; Provisional	99.96
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.96
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.96
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.96
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.96
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.96
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.96
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.96
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.96
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.96
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.96
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.96
PHA02882	294	putative serine/threonine kinase; Provisional	99.96
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.96
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.96
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.96
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.96
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.96
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.96
PTZ00284	467	protein kinase; Provisional	99.96
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.96
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.96
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.96
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.96
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.96
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.96
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.96
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.96
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.96
PLN00009	294	cyclin-dependent kinase A; Provisional	99.96
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.96
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.96
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.96
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.96
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.96
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.96
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.96
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.96
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.95
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.95
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.95
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.95
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.95
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.95
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.95
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.95
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.95
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.95
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.95
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.95
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.95
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.95
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.95
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.95
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.95
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.95
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.95
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.95
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.95
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.95
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.95
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.95
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.95
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.95
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.95
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.95
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.94
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.94
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.94
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.94
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.94
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.94
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.94
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.94
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.94
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.94
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.93
PLN00181	793	protein SPA1-RELATED; Provisional	99.93
KOG3653	534	consensus Transforming growth factor beta/activin	99.93
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.93
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.93
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.93
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.93
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.92
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.91
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.91
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.91
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.91
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.91
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.9
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.9
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.9
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.88
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.88
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.88
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.88
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.88
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.88
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.86
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.85
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.84
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.83
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.81
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.81
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.81
KOG1152	772	consensus Signal transduction serine/threonine kin	99.78
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.75
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.75
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.73
PRK09188	365	serine/threonine protein kinase; Provisional	99.66
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.62
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.6
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.6
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.58
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.56
PRK12274	218	serine/threonine protein kinase; Provisional	99.55
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.54
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.49
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.48
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.43
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.4
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.4
PRK10345	210	hypothetical protein; Provisional	99.39
KOG1243	690	consensus Protein kinase [General function predict	99.38
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.36
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.31
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.26
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.25
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.24
PRK14879	211	serine/threonine protein kinase; Provisional	99.21
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.2
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.18
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.15
smart00090	237	RIO RIO-like kinase.	99.11
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.88
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	98.74
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.66
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.65
KOG2137	700	consensus Protein kinase [Signal transduction mech	98.63
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.61
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.61
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.56
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	98.54
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.47
COG4248	637	Uncharacterized protein with protein kinase and he	98.28
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.27
KOG3087	229	consensus Serine/threonine protein kinase [General	98.23
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.18
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	98.16
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.1
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.02
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	97.95
PRK09902	216	hypothetical protein; Provisional	97.62
COG0478	304	RIO-like serine/threonine protein kinase fused to	97.51
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	97.32
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	97.2
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	96.85
KOG1235	538	consensus Predicted unusual protein kinase [Genera	96.26
COG0661	517	AarF Predicted unusual protein kinase [General fun	96.26
KOG1093	725	consensus Predicted protein kinase (contains TBC a	96.09
KOG0576	829	consensus Mitogen-activated protein kinase kinase	95.48
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	95.16
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	94.27
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	94.22
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	93.75
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	93.41
KOG2268	465	consensus Serine/threonine protein kinase [Signal	93.39
PF01636	239	APH: Phosphotransferase enzyme family This family	92.79
PRK05231	319	homoserine kinase; Provisional	92.73
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	91.98
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	91.83
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	91.83
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	91.7
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	91.68
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	91.49
PRK10271	188	thiK thiamine kinase; Provisional	91.21
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	91.16
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	89.96
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	89.14
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	88.78
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	88.63
COG2334	331	Putative homoserine kinase type II (protein kinase	88.47
smart00587	196	CHK ZnF_C4 abd HLH domain containing kinases domai	88.39
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	87.9
PRK09550	401	mtnK methylthioribose kinase; Reviewed	85.81
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	85.15
PLN02236	344	choline kinase	85.13
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	85.07
PRK06148	1013	hypothetical protein; Provisional	82.78
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	82.76
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	82.05
PRK12396	409	5-methylribose kinase; Reviewed	80.32

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.6e-41  Score=260.06  Aligned_cols=164  Identities=23%  Similarity=0.346  Sum_probs=142.3

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      |++++|||||++.++   ++..|+||||++||.|.+++ .+..           |++.|+.|||+   .||+||||||+|
T Consensus       230 LkkL~HP~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~---~GI~HRDiKPeN  306 (475)
T KOG0615|consen  230 LKKLSHPNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHS---QGIIHRDIKPEN  306 (475)
T ss_pred             HHhcCCCCEEEEeeeeecCCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHH---cCcccccCCcce
Confidence            678999999999999   78889999999999999999 3222           99999999999   999999999999


Q ss_pred             EEEccC---CceEEecccCcccccCCCCCcceeeecccccccCCC---------CCCccchHHHHHHHHHHHhCCccccc
Q 039565           71 ILLNEK---VQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE---------LTEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        71 ill~~~---~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe---------~~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      ||++.+   ..+|++|||+++...   ......+++||+.|.|||         +..++|+||+||++|-+++|.+||..
T Consensus       307 ILl~~~~e~~llKItDFGlAK~~g---~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~  383 (475)
T KOG0615|consen  307 ILLSNDAEDCLLKITDFGLAKVSG---EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSE  383 (475)
T ss_pred             EEeccCCcceEEEecccchhhccc---cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCccc
Confidence            999866   688999999999753   344566789999999999         34588999999999999999999976


Q ss_pred             cCCCC----------------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          139 SFKGE----------------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       139 ~~~~~----------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      .....                .-...+++..+++.++|..||++|||++++++
T Consensus       384 ~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~  436 (475)
T KOG0615|consen  384 EYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALN  436 (475)
T ss_pred             ccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence            54433                22356778999999999999999999999876

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=6.8e-40  Score=257.54  Aligned_cols=172  Identities=30%  Similarity=0.361  Sum_probs=145.0

Q ss_pred             cccccCCCeeeeccc--CC--ccEEEEecCCCCChhhhcCC--cc------------cHHHHHHHHhcCCCCC-cEEeCC
Q 039565            6 RNKLTGPLLVELIGK--QK--NNALELGFRGNPELVDQQGK--EE------------VCCPGLEYLHQGLKHP-IIQRDM   66 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~--~~~lv~e~~~~~~L~~~~~~--~~------------~i~~~l~~Lh~~~~~~-i~h~dl   66 (188)
                      |++++|||||+++|+  ..  .+++||||+++|+|..++..  ..            |+|.||.|||+   .+ ||||||
T Consensus        93 l~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~---~~~iIHrDL  169 (362)
T KOG0192|consen   93 LSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHS---EGPIIHRDL  169 (362)
T ss_pred             HHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhc---CCCeeeccc
Confidence            567999999999999  33  58999999999999999933  22            99999999999   78 999999


Q ss_pred             CCCcEEEccCC-ceEEecccCcccccCCCCCcceeeecccccccCCC--------CCCccchHHHHHHHHHHHhCCcccc
Q 039565           67 KSTNILLNEKV-QAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE--------LTEKSDVDSFEIVILEIITGILTVD  137 (188)
Q Consensus        67 ~~~nill~~~~-~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe--------~~~~~di~s~G~~l~~~~~g~~p~~  137 (188)
                      |++|+|++.++ .+||+|||+++......  .......||+.|||||        ++.++||||||+++||++||+.||.
T Consensus       170 K~~NiLv~~~~~~~KI~DFGlsr~~~~~~--~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~  247 (362)
T KOG0192|consen  170 KSDNILVDLKGKTLKIADFGLSREKVISK--TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFE  247 (362)
T ss_pred             ChhhEEEcCCCCEEEECCCccceeecccc--ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCC
Confidence            99999999997 99999999998543111  1222368999999998        5788999999999999999999985


Q ss_pred             ccC-------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          138 LSF-------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       138 ~~~-------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                      ...             ....+......+..++..||+.+|..||++.+|+..|+.+..
T Consensus       248 ~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~  305 (362)
T KOG0192|consen  248 DLAPVQVASAVVVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMS  305 (362)
T ss_pred             CCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHH
Confidence            422             233455578899999999999999999999999999986644

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=2e-40  Score=252.37  Aligned_cols=164  Identities=24%  Similarity=0.359  Sum_probs=142.3

Q ss_pred             cccccCCCeeeeccc---CC-ccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QK-NNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~-~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+.+||+||+++|.   .. ...++||||++|+|+.++...+            ++++||.|||+.  ++|+|||+||+
T Consensus       131 l~~~~spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPs  208 (364)
T KOG0581|consen  131 LRSCQSPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPS  208 (364)
T ss_pred             HhhCCCCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHH
Confidence            456799999999999   45 4899999999999999994322            999999999963  89999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCcccccc----
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLS----  139 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~----  139 (188)
                      |+|++..|.+||+|||+++...  .+  ...++.||..||+||      ++.++||||||+.++|+..|+.|+.+.    
T Consensus       209 NlLvNskGeVKicDFGVS~~lv--nS--~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~  284 (364)
T KOG0581|consen  209 NLLVNSKGEVKICDFGVSGILV--NS--IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPY  284 (364)
T ss_pred             HeeeccCCCEEeccccccHHhh--hh--hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCC
Confidence            9999999999999999998653  22  567899999999999      789999999999999999999988764    


Q ss_pred             -------------CCCCcCHH-HHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          140 -------------FKGEFDII-SVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       140 -------------~~~~~~~~-~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                   .+...+.. .++++.+++..|+++||.+|||++|+++
T Consensus       285 ~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~  334 (364)
T KOG0581|consen  285 LDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQ  334 (364)
T ss_pred             CCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence                         12234443 7888999999999999999999999987

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=5.5e-40  Score=259.62  Aligned_cols=175  Identities=24%  Similarity=0.279  Sum_probs=146.2

Q ss_pred             CcccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-cc-------------cHHHHHHHHhcCCCCCcEEeCCC
Q 039565            5 NRNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-EE-------------VCCPGLEYLHQGLKHPIIQRDMK   67 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~~-------------~i~~~l~~Lh~~~~~~i~h~dl~   67 (188)
                      .|++|+|+|||+++++   +..++|||||++.|+|.++++. .+             |||+||+||.+   .++|||||.
T Consensus       254 iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes---~~~IHRDLA  330 (468)
T KOG0197|consen  254 IMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLES---KNYIHRDLA  330 (468)
T ss_pred             HHHhCcccCeEEEEEEEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHh---CCccchhhh
Confidence            4789999999999999   4669999999999999999943 22             99999999999   999999999


Q ss_pred             CCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccc--
Q 039565           68 STNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDL--  138 (188)
Q Consensus        68 ~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~--  138 (188)
                      +.|||++++..+||+|||+++... ...........-+..|.|||      ++.+|||||||+++||++| |+.|+..  
T Consensus       331 ARNiLV~~~~~vKIsDFGLAr~~~-d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~ms  409 (468)
T KOG0197|consen  331 ARNILVDEDLVVKISDFGLARLIG-DDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMS  409 (468)
T ss_pred             hhheeeccCceEEEcccccccccC-CCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCC
Confidence            999999999999999999999432 11111122223345688998      8999999999999999996 7777643  


Q ss_pred             ----------cCCCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          139 ----------SFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       139 ----------~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                                ....+.|..++..+.+++..||..+|++||||+.+...|+.+...
T Consensus       410 n~ev~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~  464 (468)
T KOG0197|consen  410 NEEVLELLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS  464 (468)
T ss_pred             HHHHHHHHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence                      233446667889999999999999999999999999999887654

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-38  Score=254.03  Aligned_cols=173  Identities=25%  Similarity=0.359  Sum_probs=150.2

Q ss_pred             CCcccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            4 PNRNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         4 ~~l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      .+|++|+||||+.+.|+   ...+++|||||+.|.|...++...            +||.|+.|||.   +.|||||||.
T Consensus       164 KHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~---hKIIHRDLKS  240 (904)
T KOG4721|consen  164 KHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHL---HKIIHRDLKS  240 (904)
T ss_pred             HHHHhccCcceeeEeeeecCCceeEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHH---hhHhhhccCC
Confidence            46889999999999999   677889999999999999993322            99999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCcccccc---
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLS---  139 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~---  139 (188)
                      .||||+.+..+||+|||-++...   .....-.+.||..|||||      .+.++|||||||++|||+||..||...   
T Consensus       241 PNiLIs~~d~VKIsDFGTS~e~~---~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdss  317 (904)
T KOG4721|consen  241 PNILISYDDVVKISDFGTSKELS---DKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSS  317 (904)
T ss_pred             CceEeeccceEEeccccchHhhh---hhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchh
Confidence            99999999999999999887432   112234589999999999      588999999999999999999998542   


Q ss_pred             ----------CCCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          140 ----------FKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       140 ----------~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                                +....+..+++.++=++.+||+..|.+||+|++|+..|+-..+
T Consensus       318 AIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~p  370 (904)
T KOG4721|consen  318 AIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASP  370 (904)
T ss_pred             eeEEeccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCH
Confidence                      3344677889999999999999999999999999999976554

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.2e-38  Score=249.76  Aligned_cols=165  Identities=23%  Similarity=0.270  Sum_probs=143.9

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCcE
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTNI   71 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~ni   71 (188)
                      |+..+|+|||++++.   .+.+|+||||+++|+|.+.+....           +++.||+|||.   .+|+|||||.+||
T Consensus       324 m~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~---~gIiHrDIKSDnI  400 (550)
T KOG0578|consen  324 MRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSLTDVVTKTRMTEGQIAAICREILQGLKFLHA---RGIIHRDIKSDNI  400 (550)
T ss_pred             HHhccchHHHHHHHHhcccceeEEEEeecCCCchhhhhhcccccHHHHHHHHHHHHHHHHHHHh---cceeeecccccee
Confidence            677899999999998   899999999999999999993331           88899999999   9999999999999


Q ss_pred             EEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccc-------
Q 039565           72 LLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDL-------  138 (188)
Q Consensus        72 ll~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~-------  138 (188)
                      |++.+|.+||+|||++..+.  .......+..||++|||||      |+.+.||||||++++||+.|.+||=-       
T Consensus       401 LL~~~g~vKltDFGFcaqi~--~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAl  478 (550)
T KOG0578|consen  401 LLTMDGSVKLTDFGFCAQIS--EEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL  478 (550)
T ss_pred             EeccCCcEEEeeeeeeeccc--cccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHH
Confidence            99999999999999987653  2233567789999999999      79999999999999999999998721       


Q ss_pred             -------cCCCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          139 -------SFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       139 -------~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                             ......+...+..+.+++.+||+.|+++|+++.++|+
T Consensus       479 yLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~  522 (550)
T KOG0578|consen  479 YLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLE  522 (550)
T ss_pred             HHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence                   1122244567889999999999999999999999997

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.6e-37  Score=242.50  Aligned_cols=176  Identities=42%  Similarity=0.593  Sum_probs=145.4

Q ss_pred             CcccccCCCeeeeccc---CC-ccEEEEecCCCCChhhhc-C-Cc-c-----------cHHHHHHHHhcCCCCCcEEeCC
Q 039565            5 NRNKLTGPLLVELIGK---QK-NNALELGFRGNPELVDQQ-G-KE-E-----------VCCPGLEYLHQGLKHPIIQRDM   66 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~---~~-~~~lv~e~~~~~~L~~~~-~-~~-~-----------~i~~~l~~Lh~~~~~~i~h~dl   66 (188)
                      .+++++|||+|+++|+   .+ +..||+||+++|+|.+++ . .. .           ++|.||+|||+.+...|+|||+
T Consensus       124 ~ls~l~H~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDi  203 (361)
T KOG1187|consen  124 ILSRLRHPNLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDI  203 (361)
T ss_pred             HHhcCCCcCcccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCC
Confidence            4678999999999999   44 489999999999999999 3 22 2           9999999999987778999999


Q ss_pred             CCCcEEEccCCceEEecccCcccccCCCCCcceeee-cccccccCCC------CCCccchHHHHHHHHHHHhCCccccc-
Q 039565           67 KSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTI-AGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDL-  138 (188)
Q Consensus        67 ~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~-  138 (188)
                      |++|||+|++...|++|||+++..+..  ....... .|+.+|++||      .+.++||||||+++.|+++|+.+.+. 
T Consensus       204 KssNILLD~~~~aKlsDFGLa~~~~~~--~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~  281 (361)
T KOG1187|consen  204 KSSNILLDEDFNAKLSDFGLAKLGPEG--DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQS  281 (361)
T ss_pred             CHHHeeECCCCCEEccCccCcccCCcc--ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCC
Confidence            999999999999999999999754311  1111222 7999999999      47899999999999999999975542 


Q ss_pred             ---------------------------cCC-CCcCH-HHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          139 ---------------------------SFK-GEFDI-ISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       139 ---------------------------~~~-~~~~~-~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                                                 .+. .+++. .+..++..++..|++.+|..||+|.+|+++|+.+..
T Consensus       282 ~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~  354 (361)
T KOG1187|consen  282 RPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS  354 (361)
T ss_pred             CCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence                                       222 23343 578889999999999999999999999999976553

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=8.7e-38  Score=240.40  Aligned_cols=163  Identities=23%  Similarity=0.326  Sum_probs=135.5

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      |++++|||||+++++   ++..|+|||||.+|+|.+|+++.+            |+|.||++||+   .+||||||||+|
T Consensus        63 Lkel~H~nIV~l~d~~~~~~~i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~---~~IiHRDLKPQN  139 (429)
T KOG0595|consen   63 LKELKHPNIVRLLDCIEDDDFIYLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHE---NNIIHRDLKPQN  139 (429)
T ss_pred             HHhcCCcceeeEEEEEecCCeEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCcce
Confidence            578999999999999   899999999999999999993332            99999999999   999999999999


Q ss_pred             EEEccC------CceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccc
Q 039565           71 ILLNEK------VQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        71 ill~~~------~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      ||++.+      ..+||+|||+++...   ......+.+|++.|||||      |+.++|+||.|+++|++++|..||+.
T Consensus       140 iLLs~~~~~~~~~~LKIADFGfAR~L~---~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a  216 (429)
T KOG0595|consen  140 ILLSTTARNDTSPVLKIADFGFARFLQ---PGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDA  216 (429)
T ss_pred             EEeccCCCCCCCceEEecccchhhhCC---chhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccc
Confidence            999865      468999999999654   334566789999999999      79999999999999999999999984


Q ss_pred             cCCC--------------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHH
Q 039565          139 SFKG--------------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVV  174 (188)
Q Consensus       139 ~~~~--------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~  174 (188)
                      ....              ..+......+.+++...++.++..|-++.+-+
T Consensus       217 ~t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~  266 (429)
T KOG0595|consen  217 ETPKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFF  266 (429)
T ss_pred             cCHHHHHHHHhccccccCchhhhccCchhhhhhHHHhcCccccCchHHhh
Confidence            4322              22333444556777777888888887766533

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.4e-37  Score=249.10  Aligned_cols=164  Identities=22%  Similarity=0.317  Sum_probs=144.1

Q ss_pred             ccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-cc-----------cHHHHHHHHhcCCCCCcEEeCCCCCcE
Q 039565            7 NKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-EE-----------VCCPGLEYLHQGLKHPIIQRDMKSTNI   71 (188)
Q Consensus         7 ~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~ni   71 (188)
                      ++|+|||||+++++   .++.|+|+|+|..++|..++++ ..           |++.||.|||+   .+|+|||||..|+
T Consensus        73 r~L~HpnIV~f~~~FEDs~nVYivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~---~~IiHRDLKLGNl  149 (592)
T KOG0575|consen   73 RSLKHPNIVQFYHFFEDSNNVYIVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHS---LGIIHRDLKLGNL  149 (592)
T ss_pred             HhcCCCcEEeeeeEeecCCceEEEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHh---cCceecccchhhe
Confidence            46899999999999   8899999999999999999943 32           99999999999   9999999999999


Q ss_pred             EEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC----
Q 039565           72 LLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK----  141 (188)
Q Consensus        72 ll~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~----  141 (188)
                      +++++..+||+|||++....  .......+.+||+-|.|||      .+-.+||||+||++|.++.|++||....-    
T Consensus       150 fL~~~~~VKIgDFGLAt~le--~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety  227 (592)
T KOG0575|consen  150 FLNENMNVKIGDFGLATQLE--YDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETY  227 (592)
T ss_pred             eecCcCcEEecccceeeeec--CcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHH
Confidence            99999999999999998653  2334456789999999999      57889999999999999999999976421    


Q ss_pred             -------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 -------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 -------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                             -..|...+....+++..+|+.+|.+|||+++|+.
T Consensus       228 ~~Ik~~~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~  268 (592)
T KOG0575|consen  228 NKIKLNEYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLD  268 (592)
T ss_pred             HHHHhcCcccccccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence                   1244567778999999999999999999999987

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=8.6e-38  Score=230.98  Aligned_cols=171  Identities=20%  Similarity=0.256  Sum_probs=141.0

Q ss_pred             CcccccCCCeeeeccc----C-CccEEEEecCCCCChhhhcC---Ccc-------------cHHHHHHHHhcCCCC-CcE
Q 039565            5 NRNKLTGPLLVELIGK----Q-KNNALELGFRGNPELVDQQG---KEE-------------VCCPGLEYLHQGLKH-PII   62 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~----~-~~~~lv~e~~~~~~L~~~~~---~~~-------------~i~~~l~~Lh~~~~~-~i~   62 (188)
                      -|++|+|||||+.+++    + +-++++||+|+.|+|...++   +..             |+|.||..+|....+ .|.
T Consensus        71 lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~Vm  150 (375)
T KOG0591|consen   71 LLKQLNHPNIVQYYAHSFIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVM  150 (375)
T ss_pred             HHHhcCCchHHHHHHHhhhccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhcccccccee
Confidence            3678999999999996    3 44899999999999999982   221             999999999973323 489


Q ss_pred             EeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccc
Q 039565           63 QRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTV  136 (188)
Q Consensus        63 h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~  136 (188)
                      |||+||.||+++.+|.+||+|||+++.+.  .......+..|||+||+||      ++.++||||+||++|||+.-..||
T Consensus       151 HRDIKPaNIFl~~~gvvKLGDfGL~r~l~--s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF  228 (375)
T KOG0591|consen  151 HRDIKPANIFLTANGVVKLGDFGLGRFLS--SKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPF  228 (375)
T ss_pred             eccCcchheEEcCCCceeeccchhHhHhc--chhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCc
Confidence            99999999999999999999999999753  3334566789999999999      799999999999999999999998


Q ss_pred             cccC---------CCC---cC-HHHHHHHHHHHHHccCcCCCCCCCHHHHHHHH
Q 039565          137 DLSF---------KGE---FD-IISVEKAVEIAMASVSSKVNRRPLMNQVVMVR  177 (188)
Q Consensus       137 ~~~~---------~~~---~~-~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l  177 (188)
                      ....         ..+   .+ ...+..+..++..|+..||+.||+...+++.+
T Consensus       229 ~g~n~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di  282 (375)
T KOG0591|consen  229 YGDNLLSLCKKIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDI  282 (375)
T ss_pred             ccccHHHHHHHHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHH
Confidence            5321         112   23 67889999999999999999999854444443

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.6e-37  Score=237.53  Aligned_cols=177  Identities=23%  Similarity=0.259  Sum_probs=145.8

Q ss_pred             CcccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-------------cHHHHHHHHhcCCCCCcEEeCCC
Q 039565            5 NRNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-------------VCCPGLEYLHQGLKHPIIQRDMK   67 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-------------~i~~~l~~Lh~~~~~~i~h~dl~   67 (188)
                      +|+.++||||++.+..   +..+|+||.||.+|++.+++ ...+             +++.||.|||.   .|.||||+|
T Consensus        77 ~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~---~G~IHRdvK  153 (516)
T KOG0582|consen   77 TMSLIDHPNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQ---NGHIHRDVK  153 (516)
T ss_pred             HhhhcCCCCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHh---cCceecccc
Confidence            5788999999999888   99999999999999999999 2222             99999999999   999999999


Q ss_pred             CCcEEEccCCceEEecccCcccccCCCCCc-ce-eeecccccccCCC--------CCCccchHHHHHHHHHHHhCCcccc
Q 039565           68 STNILLNEKVQAKLADFGQSRISPVEGGTH-MS-TTIAGTAGFLNTE--------LTEKSDVDSFEIVILEIITGILTVD  137 (188)
Q Consensus        68 ~~nill~~~~~~kl~d~~~~~~~~~~~~~~-~~-~~~~~~~~~~~pe--------~~~~~di~s~G~~l~~~~~g~~p~~  137 (188)
                      +.|||++.+|.+||+|||++--+...+... .. .++.|+++|||||        |+.++||||||++..|+.+|..||.
T Consensus       154 AgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~  233 (516)
T KOG0582|consen  154 AGNILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFS  233 (516)
T ss_pred             cccEEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcc
Confidence            999999999999999999865433222221 12 5678999999999        7899999999999999999999984


Q ss_pred             ccC---------------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH--HHhhccCcc
Q 039565          138 LSF---------------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM--VREQGSGSR  184 (188)
Q Consensus       138 ~~~---------------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~--~l~~~~~~~  184 (188)
                      ...                     +.+........+.+++..|++.||.+|||++++++  .+++.+...
T Consensus       234 k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k~~~  303 (516)
T KOG0582|consen  234 KYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAKSKE  303 (516)
T ss_pred             cCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhccchh
Confidence            321                     12222345667889999999999999999999987  455555443

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.5e-37  Score=236.44  Aligned_cols=169  Identities=22%  Similarity=0.339  Sum_probs=140.7

Q ss_pred             cccccCCCeeeeccc---CC--ccEEEEecCCCCChhhhcCC----cc---------cHHHHHHHHhcCCCCCcEEeCCC
Q 039565            6 RNKLTGPLLVELIGK---QK--NNALELGFRGNPELVDQQGK----EE---------VCCPGLEYLHQGLKHPIIQRDMK   67 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~--~~~lv~e~~~~~~L~~~~~~----~~---------~i~~~l~~Lh~~~~~~i~h~dl~   67 (188)
                      |.+++|||||+.+|.   .+  .+++.|||+++|+|.+++.+    .+         |++.||+|||+   ++++|||||
T Consensus        68 L~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs---~g~vH~DiK  144 (313)
T KOG0198|consen   68 LSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHS---KGIVHCDIK  144 (313)
T ss_pred             HHhCCCCCEEeeCCccccccCeeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCcc
Confidence            567889999999996   33  58999999999999999922    22         99999999999   999999999


Q ss_pred             CCcEEEcc-CCceEEecccCcccccCCCC-CcceeeecccccccCCCC-----CC--ccchHHHHHHHHHHHhCCccccc
Q 039565           68 STNILLNE-KVQAKLADFGQSRISPVEGG-THMSTTIAGTAGFLNTEL-----TE--KSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        68 ~~nill~~-~~~~kl~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~pe~-----~~--~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      |+|||++. ++.+||+|||+++....... ........||+.||+||.     ..  ++||||+||++.||+||..||..
T Consensus       145 ~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~  224 (313)
T KOG0198|consen  145 PANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSE  224 (313)
T ss_pred             cceEEEeCCCCeEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchh
Confidence            99999999 79999999998875432111 122345789999999992     23  89999999999999999988865


Q ss_pred             c--------------CCCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHH
Q 039565          139 S--------------FKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVR  177 (188)
Q Consensus       139 ~--------------~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l  177 (188)
                      .              ..++++...+....+++..|+..+|+.|||++++++.-
T Consensus       225 ~~~~~~~~~~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hp  277 (313)
T KOG0198|consen  225 FFEEAEALLLIGREDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHP  277 (313)
T ss_pred             hcchHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhCh
Confidence            1              11356666788999999999999999999999999843

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=7.4e-36  Score=234.72  Aligned_cols=174  Identities=21%  Similarity=0.217  Sum_probs=138.0

Q ss_pred             ccc-cCCCeeeeccc----CCccEEEEecCCCCChhhhcCC-c-------------------------------------
Q 039565            7 NKL-TGPLLVELIGK----QKNNALELGFRGNPELVDQQGK-E-------------------------------------   43 (188)
Q Consensus         7 ~~l-~Hpniv~~~~~----~~~~~lv~e~~~~~~L~~~~~~-~-------------------------------------   43 (188)
                      .++ +||||+++++.    ....+++|||+++|+|.+++.. .                                     
T Consensus        65 ~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (338)
T cd05102          65 IHIGNHLNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASV  144 (338)
T ss_pred             HHhccCcceeeEEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCc
Confidence            345 89999999997    4467899999999999988821 0                                     


Q ss_pred             ------------------------------------ccHHHHHHHHhcCCCCCcEEeCCCCCcEEEccCCceEEecccCc
Q 039565           44 ------------------------------------EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQS   87 (188)
Q Consensus        44 ------------------------------------~~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~   87 (188)
                                                          .|++.||+|||+   .+++||||||+||+++.++.++|+|||++
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDiKp~Nil~~~~~~~kl~DfG~a  221 (338)
T cd05102         145 LFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLA  221 (338)
T ss_pred             cccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCccceEEEcCCCcEEEeecccc
Confidence                                                089999999999   99999999999999999999999999998


Q ss_pred             ccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCCC-------------CcCHH
Q 039565           88 RISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFKG-------------EFDII  147 (188)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~~-------------~~~~~  147 (188)
                      +...............++..|++||      ++.++||||||+++|++++ |..||......             ..+..
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  301 (338)
T cd05102         222 RDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPEN  301 (338)
T ss_pred             cccccCcchhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCC
Confidence            7542111111112234556799999      5889999999999999997 88888643211             11223


Q ss_pred             HHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          148 SVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       148 ~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                      .+..+.+++..||+.+|.+|||+.++++.|+.+.+.
T Consensus       302 ~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~~  337 (338)
T cd05102         302 ATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQE  337 (338)
T ss_pred             CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence            456789999999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.5e-36  Score=236.54  Aligned_cols=165  Identities=22%  Similarity=0.326  Sum_probs=142.9

Q ss_pred             ccccc-CCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLT-GPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~-Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +++++ ||||++++++   ....++||||+.+|+|.+++.+.+            |++.|++|||+   .+|+||||||+
T Consensus        73 ~~~~~~HpnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~---~gi~HRDLK~E  149 (370)
T KOG0583|consen   73 LRRLRSHPNIIRLLEVFATPTKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHS---RGIVHRDLKPE  149 (370)
T ss_pred             HHHhccCCCEeEEEEEEecCCeEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHH
Confidence            56777 9999999999   777999999999999999992222            99999999999   99999999999


Q ss_pred             cEEEccC-CceEEecccCcccccCCCCCcceeeecccccccCCC-------C-CCccchHHHHHHHHHHHhCCccccccC
Q 039565           70 NILLNEK-VQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------L-TEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        70 nill~~~-~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~-~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      |++++.+ +.+||+|||++....  .......+.+|++.|+|||       + ..++|+||+|+++|.|++|..||+...
T Consensus       150 Nilld~~~~~~Kl~DFG~s~~~~--~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~  227 (370)
T KOG0583|consen  150 NILLDGNEGNLKLSDFGLSAISP--GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSN  227 (370)
T ss_pred             HEEecCCCCCEEEeccccccccC--CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc
Confidence            9999999 999999999998653  3344567789999999999       2 578999999999999999999998643


Q ss_pred             C-----------CCcCHHH-HHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          141 K-----------GEFDIIS-VEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       141 ~-----------~~~~~~~-~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      .           -.++... +..+..++..|+..+|.+|+|+.+|++
T Consensus       228 ~~~l~~ki~~~~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~  274 (370)
T KOG0583|consen  228 VPNLYRKIRKGEFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILE  274 (370)
T ss_pred             HHHHHHHHhcCCccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence            1           1234444 889999999999999999999999983

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=9.7e-36  Score=235.94  Aligned_cols=167  Identities=25%  Similarity=0.318  Sum_probs=142.0

Q ss_pred             cccc-cCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKL-TGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l-~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      |.+| .||.|++++--   ...+|+|+||+++|+|.+++++.+            +++.||+|||+   .|||||||||+
T Consensus       127 l~~L~~hPgivkLy~TFQD~~sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~---~GIIHRDlKPE  203 (604)
T KOG0592|consen  127 LTQLSGHPGIVKLYFTFQDEESLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHS---NGIIHRDLKPE  203 (604)
T ss_pred             HHHhhCCCCeEEEEEEeecccceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHh---cCceeccCChh
Confidence            4456 89999999777   889999999999999999995555            99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCC---------cc--eeeecccccccCCC------CCCccchHHHHHHHHHHHhC
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGT---------HM--STTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITG  132 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~---------~~--~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g  132 (188)
                      |||++++++++|+|||.++.+......         ..  ...+.||..|++||      .+..+|+|+|||++|+|+.|
T Consensus       204 NILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG  283 (604)
T KOG0592|consen  204 NILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAG  283 (604)
T ss_pred             heeEcCCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcC
Confidence            999999999999999999876422111         11  24589999999999      47899999999999999999


Q ss_pred             CccccccC-----------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          133 ILTVDLSF-----------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       133 ~~p~~~~~-----------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      .+||....           .-+++...++.+.+++...|..||.+|++.++|-+
T Consensus       284 ~PPFra~NeyliFqkI~~l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~  337 (604)
T KOG0592|consen  284 QPPFRAANEYLIFQKIQALDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKA  337 (604)
T ss_pred             CCCCccccHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHccCccccccHHHHhh
Confidence            99996532           22345555678899999999999999999998876

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=5.9e-36  Score=227.90  Aligned_cols=158  Identities=27%  Similarity=0.316  Sum_probs=136.4

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      |.+++||.||++.-.   .+++|+|+||+.||.|...+++.+            +++.||.|||+   .+|+|||+||+|
T Consensus        79 L~~v~hPFiv~l~ysFQt~~kLylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~---~gIiyRDlKPEN  155 (357)
T KOG0598|consen   79 LSKIKHPFIVKLIYSFQTEEKLYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHS---KGIIYRDLKPEN  155 (357)
T ss_pred             HHhCCCCcEeeeEEecccCCeEEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHh---CCeeeccCCHHH
Confidence            567999999999655   899999999999999999995444            99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC---
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK---  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~---  141 (188)
                      ||++..|+++|+|||+++...  .......+++||+.|||||      ++.++|.||+|+++|+|++|..||.....   
T Consensus       156 ILLd~~GHi~LtDFgL~k~~~--~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~  233 (357)
T KOG0598|consen  156 ILLDEQGHIKLTDFGLCKEDL--KDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKM  233 (357)
T ss_pred             eeecCCCcEEEeccccchhcc--cCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHH
Confidence            999999999999999998532  2223455689999999999      79999999999999999999999965432   


Q ss_pred             ---------CCcCHHHHHHHHHHHHHccCcCCCCCC
Q 039565          142 ---------GEFDIISVEKAVEIAMASVSSKVNRRP  168 (188)
Q Consensus       142 ---------~~~~~~~~~~~~~l~~~cl~~~p~~Rp  168 (188)
                               ...+...+....+++...+..+|++|.
T Consensus       234 ~~~I~~~k~~~~p~~ls~~ardll~~LL~rdp~~RL  269 (357)
T KOG0598|consen  234 YDKILKGKLPLPPGYLSEEARDLLKKLLKRDPRQRL  269 (357)
T ss_pred             HHHHhcCcCCCCCccCCHHHHHHHHHHhccCHHHhc
Confidence                     223334677889999999999999995

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=2e-35  Score=227.34  Aligned_cols=170  Identities=19%  Similarity=0.220  Sum_probs=139.5

Q ss_pred             CcccccCCCeeeeccc--C-----CccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeC
Q 039565            5 NRNKLTGPLLVELIGK--Q-----KNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRD   65 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~--~-----~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~d   65 (188)
                      .|.+++||||++++++  .     ...+++|||+++|+|.+++.+..            |++.||.|||+.  .+++|||
T Consensus        71 ~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~~~Hrd  148 (283)
T PHA02988         71 NLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKY--TNKPYKN  148 (283)
T ss_pred             HHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhc--CCCCCCc
Confidence            4678999999999987  2     36789999999999999993322            899999999972  4888999


Q ss_pred             CCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC--------CCCccchHHHHHHHHHHHhCCcccc
Q 039565           66 MKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE--------LTEKSDVDSFEIVILEIITGILTVD  137 (188)
Q Consensus        66 l~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe--------~~~~~di~s~G~~l~~~~~g~~p~~  137 (188)
                      +||+||+++.++.+|++|||+++.....     .....++..|+|||        ++.++|+||||+++|++++|..||+
T Consensus       149 lkp~nill~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~  223 (283)
T PHA02988        149 LTSVSFLVTENYKLKIICHGLEKILSSP-----PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFE  223 (283)
T ss_pred             CChhhEEECCCCcEEEcccchHhhhccc-----cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCC
Confidence            9999999999999999999998754311     11234667788888        4678999999999999999999996


Q ss_pred             ccCC-------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhcc
Q 039565          138 LSFK-------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGS  181 (188)
Q Consensus       138 ~~~~-------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~  181 (188)
                      ....             ...+...+..+.+++.+||+.+|++|||++++++.|++..
T Consensus       224 ~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~  280 (283)
T PHA02988        224 NLTTKEIYDLIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK  280 (283)
T ss_pred             CCCHHHHHHHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence            4321             1123346778999999999999999999999999998764

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=7.8e-36  Score=246.73  Aligned_cols=174  Identities=21%  Similarity=0.263  Sum_probs=141.7

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcC-Ccc-------------------------cHHHHHHHHhcC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQG-KEE-------------------------VCCPGLEYLHQG   56 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~-~~~-------------------------~i~~~l~~Lh~~   56 (188)
                      |..++|||||+++|+   ++.+++|||||++|+|.+|+. ..+                         |||.||+||.+ 
T Consensus       543 la~l~H~nIVrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~-  621 (774)
T KOG1026|consen  543 LAELQHPNIVRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSS-  621 (774)
T ss_pred             HHhccCCCeEEEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-
Confidence            467999999999999   899999999999999999992 111                         99999999999 


Q ss_pred             CCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHH
Q 039565           57 LKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEII  130 (188)
Q Consensus        57 ~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~  130 (188)
                        ..++||||..+|.||+++..+||+|||+++-.-..+-........-+.+||+||      |+++||||||||++||++
T Consensus       622 --~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIF  699 (774)
T KOG1026|consen  622 --HHFVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIF  699 (774)
T ss_pred             --CcccccchhhhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhh
Confidence              999999999999999999999999999997421111000111112345788888      899999999999999999


Q ss_pred             h-CCccccccC------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          131 T-GILTVDLSF------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       131 ~-g~~p~~~~~------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                      + |..|+-.-.            .-+.+..++.++.+++..||+.+|.+||++.+|-..|+....
T Consensus       700 syG~QPy~glSn~EVIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~  764 (774)
T KOG1026|consen  700 SYGKQPYYGLSNQEVIECIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQ  764 (774)
T ss_pred             ccccCcccccchHHHHHHHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHh
Confidence            6 666763322            134667788999999999999999999999999998876543

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.3e-35  Score=249.53  Aligned_cols=175  Identities=23%  Similarity=0.289  Sum_probs=144.0

Q ss_pred             CcccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc------c-------------cHHHHHHHHhcCCCCCcE
Q 039565            5 NRNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE------E-------------VCCPGLEYLHQGLKHPII   62 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~------~-------------~i~~~l~~Lh~~~~~~i~   62 (188)
                      .|++++|||||+++|+   ....++++|||.+|+|..|++..      +             |+|.|+.||++   ...|
T Consensus       748 ~m~~f~HpNiv~liGv~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~---~~fv  824 (1025)
T KOG1095|consen  748 LMSKFDHPNIVSLIGVCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES---KHFV  824 (1025)
T ss_pred             HHhcCCCcceeeEEEeecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh---CCCc
Confidence            3789999999999999   88899999999999999999433      1             99999999999   9999


Q ss_pred             EeCCCCCcEEEccCCceEEecccCcccccCCCCCcc-eeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCc
Q 039565           63 QRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHM-STTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GIL  134 (188)
Q Consensus        63 h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~  134 (188)
                      ||||..+|+|++....+|++|||+++-.- ...... ...-.-+..||+||      |+.++|||||||++||++| |..
T Consensus       825 HRDLAaRNCLL~~~r~VKIaDFGlArDiy-~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~  903 (1025)
T KOG1095|consen  825 HRDLAARNCLLDERRVVKIADFGLARDIY-DKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGAT  903 (1025)
T ss_pred             CcchhhhheeecccCcEEEcccchhHhhh-hchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCC
Confidence            99999999999999999999999998221 111101 11112335799998      8999999999999999997 667


Q ss_pred             cccccC------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          135 TVDLSF------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       135 p~~~~~------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                      ||....            .-+.+..++.++.+++.+||+.+|++||++..|++.++.+...
T Consensus       904 PY~~~~n~~v~~~~~~ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~  964 (1025)
T KOG1095|consen  904 PYPSRSNFEVLLDVLEGGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNA  964 (1025)
T ss_pred             CCCCcchHHHHHHHHhCCccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhh
Confidence            875422            2345667889999999999999999999999999988776543

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=3.7e-34  Score=234.70  Aligned_cols=167  Identities=20%  Similarity=0.225  Sum_probs=137.8

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CC----cc-----------cHHHHHHHHhcCCCCCcEEeCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GK----EE-----------VCCPGLEYLHQGLKHPIIQRDM   66 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~----~~-----------~i~~~l~~Lh~~~~~~i~h~dl   66 (188)
                      ++.++||||+++++.   .+..++||||+++|+|.+++ +.    ..           |++.||.|||+   .+|+||||
T Consensus       119 l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivHrDl  195 (478)
T PTZ00267        119 LAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHS---RKMMHRDL  195 (478)
T ss_pred             HHhCCCCCEeEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCc
Confidence            567899999999998   88999999999999998876 21    11           99999999999   99999999


Q ss_pred             CCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           67 KSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        67 ~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      ||+||+++.++.+||+|||+++...............|++.|++||      ++.++|+|||||++|+|++|..||....
T Consensus       196 kp~NIll~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~  275 (478)
T PTZ00267        196 KSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPS  275 (478)
T ss_pred             CHHhEEECCCCcEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC
Confidence            9999999999999999999987643222222234467899999998      6788999999999999999999986432


Q ss_pred             C------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          141 K------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       141 ~------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      .            ...+...+..+.+++..||+.+|++||++++++.
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~  322 (478)
T PTZ00267        276 QREIMQQVLYGKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH  322 (478)
T ss_pred             HHHHHHHHHhCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence            1            1122345568999999999999999999999875

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=7e-34  Score=218.02  Aligned_cols=171  Identities=20%  Similarity=0.280  Sum_probs=139.0

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc----------------c------------cHHHHHHHHh
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE----------------E------------VCCPGLEYLH   54 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~----------------~------------~i~~~l~~Lh   54 (188)
                      +.+++||||++++++   ....++++||+++++|.+++...                .            |++.||.|||
T Consensus        62 l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH  141 (283)
T cd05048          62 MSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLS  141 (283)
T ss_pred             HHhcCCcccceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            567899999999998   67789999999999999998221                0            8999999999


Q ss_pred             cCCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHH
Q 039565           55 QGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILE  128 (188)
Q Consensus        55 ~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~  128 (188)
                      +   .+++|+|+||+||+++.++.++|+|||++................++..|+|||      ++.++|+||||+++|+
T Consensus       142 ~---~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~e  218 (283)
T cd05048         142 S---HHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWE  218 (283)
T ss_pred             h---CCeeccccccceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHH
Confidence            9   999999999999999999999999999987532111111222334567799998      4788999999999999


Q ss_pred             HHh-CCccccccC------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhh
Q 039565          129 IIT-GILTVDLSF------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQ  179 (188)
Q Consensus       129 ~~~-g~~p~~~~~------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~  179 (188)
                      +++ |..||....            ....+...+..+.+++..||+.+|.+||++++|++.|+.
T Consensus       219 l~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         219 IFSYGLQPYYGFSNQEVIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             HHcCCCCCCCCCCHHHHHHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence            997 888875321            122334567889999999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.6e-35  Score=232.74  Aligned_cols=172  Identities=24%  Similarity=0.275  Sum_probs=142.3

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc-------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE-------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~-------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      |.+++|||||+++|+   ...+++|||+|.||+|.+++++.+             +.|.||+|||+   .+++||||.++
T Consensus       215 Mr~l~H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~---k~~IHRDIAAR  291 (474)
T KOG0194|consen  215 MRQLNHPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHS---KNCIHRDIAAR  291 (474)
T ss_pred             HHhCCCCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHH---CCCcchhHhHH
Confidence            567999999999999   899999999999999999993332             99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCccee-eecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccC-
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMST-TIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSF-  140 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~-  140 (188)
                      |+|++.++.+|++|||+++...   ...... ....+..|+|||      ++.++|||||||++||+.+ |..||.... 
T Consensus       292 NcL~~~~~~vKISDFGLs~~~~---~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~  368 (474)
T KOG0194|consen  292 NCLYSKKGVVKISDFGLSRAGS---QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKN  368 (474)
T ss_pred             HheecCCCeEEeCccccccCCc---ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCH
Confidence            9999999999999999987432   111111 123456789999      7999999999999999997 777875432 


Q ss_pred             ------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          141 ------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       141 ------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                                  ....+...+..+..++.+||..+|++||||.++.+.|+.+...
T Consensus       369 ~~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~  423 (474)
T KOG0194|consen  369 YEVKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKK  423 (474)
T ss_pred             HHHHHHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhc
Confidence                        2234446677888999999999999999999999999876544

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=1.3e-33  Score=215.07  Aligned_cols=171  Identities=16%  Similarity=0.178  Sum_probs=136.9

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||++++++   .+..++||||+++|+|.+++ ....            |++.||+|||+   .+++|+|+||+
T Consensus        60 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~---~~iiH~dikp~  136 (266)
T cd05064          60 LGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSE---MGYVHKGLAAH  136 (266)
T ss_pred             HhcCCCCCcCeEEEEEecCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeeccccHh
Confidence            567899999999998   78899999999999999998 3221            89999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccC--
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSF--  140 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~--  140 (188)
                      ||+++.++.++++|||.+...... .........++..|++||      ++.++|+||||+++|++++ |..||....  
T Consensus       137 nili~~~~~~~l~dfg~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~  215 (266)
T cd05064         137 KVLVNSDLVCKISGFRRLQEDKSE-AIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ  215 (266)
T ss_pred             hEEEcCCCcEEECCCccccccccc-chhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH
Confidence            999999999999999976532111 111111223445788998      5789999999999999875 888885321  


Q ss_pred             ----------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhc
Q 039565          141 ----------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQG  180 (188)
Q Consensus       141 ----------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~  180 (188)
                                ....+...+..+.+++..||+.+|.+||++++|++.|+..
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         216 DVIKAVEDGFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             HHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence                      1123344567899999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=1e-33  Score=225.74  Aligned_cols=171  Identities=22%  Similarity=0.230  Sum_probs=135.8

Q ss_pred             ccc-cCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc--------------------------------------
Q 039565            7 NKL-TGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE--------------------------------------   43 (188)
Q Consensus         7 ~~l-~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~--------------------------------------   43 (188)
                      ..+ +||||+++++.   ....++||||+++|+|.+++ .+.                                      
T Consensus        93 ~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  172 (375)
T cd05104          93 SYLGNHINIVNLLGACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMK  172 (375)
T ss_pred             HHhcCCcceeeeeeeeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcC
Confidence            345 79999999998   78889999999999999888 211                                      


Q ss_pred             ------------------------------------------------ccHHHHHHHHhcCCCCCcEEeCCCCCcEEEcc
Q 039565           44 ------------------------------------------------EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNE   75 (188)
Q Consensus        44 ------------------------------------------------~~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~   75 (188)
                                                                      .|++.||.|||+   .+++|||+||+||+++.
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nill~~  249 (375)
T cd05104         173 PGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLAS---KNCIHRDLAARNILLTH  249 (375)
T ss_pred             CCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCchhhEEEEC
Confidence                                                            089999999999   99999999999999999


Q ss_pred             CCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCC-------
Q 039565           76 KVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFK-------  141 (188)
Q Consensus        76 ~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~-------  141 (188)
                      ++.++++|||++................++..|++||      ++.++|+||||+++|++++ |..||.....       
T Consensus       250 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~  329 (375)
T cd05104         250 GRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKM  329 (375)
T ss_pred             CCcEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHH
Confidence            9999999999987543221111111233455699999      5789999999999999998 7788754221       


Q ss_pred             ------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhc
Q 039565          142 ------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQG  180 (188)
Q Consensus       142 ------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~  180 (188)
                            ...+...+..+.+++..||+.+|++|||+.+|++.|++.
T Consensus       330 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~  374 (375)
T cd05104         330 IKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ  374 (375)
T ss_pred             HHhCccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence                  111223456789999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=9.2e-34  Score=219.78  Aligned_cols=171  Identities=19%  Similarity=0.248  Sum_probs=134.7

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc---------------------c---------cHHHHHH
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE---------------------E---------VCCPGLE   51 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~---------------------~---------~i~~~l~   51 (188)
                      +.+++||||++++++   .+..+++|||+++++|.+++ ...                     .         |++.||.
T Consensus        73 l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~  152 (304)
T cd05096          73 LSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMK  152 (304)
T ss_pred             HhhcCCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHH
Confidence            567899999999998   77889999999999999987 210                     0         8999999


Q ss_pred             HHhcCCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHH
Q 039565           52 YLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIV  125 (188)
Q Consensus        52 ~Lh~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~  125 (188)
                      |||+   .+++|+||||+||+++.++.+||+|||+++...............++..|++||      ++.++|+||||++
T Consensus       153 ~lH~---~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~  229 (304)
T cd05096         153 YLSS---LNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVT  229 (304)
T ss_pred             HHHH---CCccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHH
Confidence            9999   999999999999999999999999999987542111111122234466789988      5788999999999


Q ss_pred             HHHHHh--CCccccccCCC-------------------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhh
Q 039565          126 ILEIIT--GILTVDLSFKG-------------------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQ  179 (188)
Q Consensus       126 l~~~~~--g~~p~~~~~~~-------------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~  179 (188)
                      +|++++  +..||......                   ..+...+..+.+++.+||+.+|++|||+++|.+.|++
T Consensus       230 l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~  304 (304)
T cd05096         230 LWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE  304 (304)
T ss_pred             HHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence            999986  44566432111                   1122345678999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-34  Score=224.97  Aligned_cols=169  Identities=24%  Similarity=0.305  Sum_probs=145.1

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +..++++||.+.++.   +..+|++||||.+|++.+.++...            ++..|+.|||+   .+.+|||+|+.|
T Consensus        65 Ls~~~~~~it~yygsyl~g~~LwiiMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~---~~kiHrDIKaan  141 (467)
T KOG0201|consen   65 LSQCDSPNITEYYGSYLKGTKLWIIMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHS---EKKIHRDIKAAN  141 (467)
T ss_pred             HHhcCcchHHhhhhheeecccHHHHHHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhh---cceecccccccc
Confidence            567889999999998   999999999999999999993222            99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccc------
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDL------  138 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~------  138 (188)
                      |++...|.+|++|||++....  .......++.||++|||||      |+.++||||||++.+||.+|.+|+..      
T Consensus       142 il~s~~g~vkl~DfgVa~ql~--~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrv  219 (467)
T KOG0201|consen  142 ILLSESGDVKLADFGVAGQLT--NTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRV  219 (467)
T ss_pred             eeEeccCcEEEEecceeeeee--chhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceE
Confidence            999999999999999987653  2333457899999999999      79999999999999999999998743      


Q ss_pred             ------cCCCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH--HHhh
Q 039565          139 ------SFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM--VREQ  179 (188)
Q Consensus       139 ------~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~--~l~~  179 (188)
                            ..++..+...+..+.+++..|+.++|+.|||+.++++  .++.
T Consensus       220 lflIpk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~  268 (467)
T KOG0201|consen  220 LFLIPKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKR  268 (467)
T ss_pred             EEeccCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHh
Confidence                  1222334467788999999999999999999999987  3444

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=100.00  E-value=4e-35  Score=240.46  Aligned_cols=176  Identities=22%  Similarity=0.286  Sum_probs=147.4

Q ss_pred             CcccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            5 NRNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      =|.+++||||+++.|+   ....++|.|||++|+|..|+ .+.+            .||+||.||.+   .+++||||.+
T Consensus       683 IMGQFdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsd---m~YVHRDLAA  759 (996)
T KOG0196|consen  683 IMGQFDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSD---MNYVHRDLAA  759 (996)
T ss_pred             hcccCCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhh---cCchhhhhhh
Confidence            3789999999999999   88899999999999999999 3333            88999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCCcceeee--cccccccCCC------CCCccchHHHHHHHHHHHh-CCccccc-
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGTHMSTTI--AGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDL-  138 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~--~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~-  138 (188)
                      .|||++.+..||++|||+++... .+......+.  .-+..|.|||      ++.++|+||||+++||.++ |..|+.+ 
T Consensus       760 RNILVNsnLvCKVsDFGLSRvle-dd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdm  838 (996)
T KOG0196|consen  760 RNILVNSNLVCKVSDFGLSRVLE-DDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM  838 (996)
T ss_pred             hheeeccceEEEeccccceeecc-cCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCccccc
Confidence            99999999999999999998653 2221112222  2234799999      8999999999999999885 7788743 


Q ss_pred             -----------cCCCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCcc
Q 039565          139 -----------SFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGSR  184 (188)
Q Consensus       139 -----------~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~~  184 (188)
                                 ....+-+.+++..+.+++..||++|-.+||.+.||+.+|+++..+-
T Consensus       839 SNQdVIkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP  895 (996)
T KOG0196|consen  839 SNQDVIKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNP  895 (996)
T ss_pred             chHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCc
Confidence                       2333455678899999999999999999999999999999987663

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=2.3e-33  Score=215.18  Aligned_cols=175  Identities=18%  Similarity=0.240  Sum_probs=139.6

Q ss_pred             cccccCCCeeeeccc--CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +++++||||++++++  ....++++||+++|+|.+++ ....            |++.||+|||+   .+++|+|+||+|
T Consensus        63 l~~l~h~~iv~~~~~~~~~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~n  139 (279)
T cd05111          63 MGSLDHAYIVRLLGICPGASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEE---HRMVHRNLAARN  139 (279)
T ss_pred             HhcCCCCCcceEEEEECCCccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCEeccccCcce
Confidence            467899999999999  66788999999999999999 2221            99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCCC-
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFKG-  142 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~~-  142 (188)
                      |+++.++.+|++|||.++...............++..|++||      ++.++|+||||+++|++++ |..||...... 
T Consensus       140 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~  219 (279)
T cd05111         140 ILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE  219 (279)
T ss_pred             EEEcCCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence            999999999999999987543222211222334556788888      5778999999999999998 88888543211 


Q ss_pred             -----------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          143 -----------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       143 -----------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                                 ..+......+.+++..||..+|++|||+.++++.|+.+.+.
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~  271 (279)
T cd05111         220 VPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARD  271 (279)
T ss_pred             HHHHHHCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence                       11122345678899999999999999999999999876554

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=1.7e-33  Score=217.00  Aligned_cols=174  Identities=18%  Similarity=0.213  Sum_probs=141.0

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc------------------c---------cHHHHHHHHh
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE------------------E---------VCCPGLEYLH   54 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~------------------~---------~i~~~l~~Lh   54 (188)
                      +++++||||++++++   ....+++|||+++++|.+++ ...                  +         |++.|++|||
T Consensus        61 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH  140 (291)
T cd05094          61 LTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA  140 (291)
T ss_pred             HhcCCCCCcceEEEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            567899999999999   77889999999999999998 211                  1         8999999999


Q ss_pred             cCCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHH
Q 039565           55 QGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILE  128 (188)
Q Consensus        55 ~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~  128 (188)
                      +   .+++|+|+||+||+++.++.++++|||++................++..|++||      ++.++|+||||+++|+
T Consensus       141 ~---~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  217 (291)
T cd05094         141 S---QHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWE  217 (291)
T ss_pred             h---CCeeecccCcceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHH
Confidence            9   999999999999999999999999999986432211111122334566789999      4778999999999999


Q ss_pred             HHh-CCccccccCC------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          129 IIT-GILTVDLSFK------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       129 ~~~-g~~p~~~~~~------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                      +++ |..||.....            ...+...+..+.+++.+||+.+|++|||+++++++|+.+..
T Consensus       218 l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~  284 (291)
T cd05094         218 IFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK  284 (291)
T ss_pred             HHhCCCCCCCCCCHHHHHHHHhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence            998 8888743211            12233456789999999999999999999999999998854

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=4.4e-34  Score=231.00  Aligned_cols=165  Identities=24%  Similarity=0.307  Sum_probs=143.3

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      |+-|.||||++++++   ..++|+++||+++|.|.+++ .+.+           |+..|+.|||.   .+|.|||+||+|
T Consensus        66 MkLi~HpnVl~LydVwe~~~~lylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~---~~icHRDLKpEN  142 (786)
T KOG0588|consen   66 MKLIEHPNVLRLYDVWENKQHLYLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHA---FNICHRDLKPEN  142 (786)
T ss_pred             HHHhcCCCeeeeeeeeccCceEEEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhh---hcceeccCCchh
Confidence            566899999999999   89999999999999999999 4433           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCC--
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFK--  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~--  141 (188)
                      ++++..+.+||+|||.+.+..   ......+.+|++-|.+||       -+.++||||+||++|.+++|.+|||+...  
T Consensus       143 lLLd~~~nIKIADFGMAsLe~---~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~  219 (786)
T KOG0588|consen  143 LLLDVKNNIKIADFGMASLEV---PGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRV  219 (786)
T ss_pred             hhhhcccCEeeeccceeeccc---CCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHH
Confidence            999999999999999987532   334566789999999999       37889999999999999999999985421  


Q ss_pred             -------C--CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          142 -------G--EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       142 -------~--~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                             +  +.+...+..+.+++..++..||++|.|+++|++.
T Consensus       220 LLlKV~~G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH  263 (786)
T KOG0588|consen  220 LLLKVQRGVFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKH  263 (786)
T ss_pred             HHHHHHcCcccCCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence                   1  1334556788899999999999999999999873

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=1.1e-33  Score=225.52  Aligned_cols=173  Identities=20%  Similarity=0.237  Sum_probs=137.3

Q ss_pred             cccc-cCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc-------------------------------------
Q 039565            6 RNKL-TGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE-------------------------------------   43 (188)
Q Consensus         6 l~~l-~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~-------------------------------------   43 (188)
                      +.++ +||||+++++.   ....+++|||+++|+|.+++ .+.                                     
T Consensus        95 l~~l~~h~nIv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (374)
T cd05106          95 LSHLGQHKNIVNLLGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFS  174 (374)
T ss_pred             HHhhccCCceeeEeeEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhccccccccccc
Confidence            3456 79999999998   77899999999999999887 210                                     


Q ss_pred             --------------------------------------------ccHHHHHHHHhcCCCCCcEEeCCCCCcEEEccCCce
Q 039565           44 --------------------------------------------EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQA   79 (188)
Q Consensus        44 --------------------------------------------~~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~~~   79 (188)
                                                                  .|++.||.|||+   .+++||||||+||+++.++.+
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~---~giiHrDLkp~Nil~~~~~~~  251 (374)
T cd05106         175 SQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLAS---KNCIHRDVAARNVLLTDGRVA  251 (374)
T ss_pred             ccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCEEeccCchheEEEeCCCeE
Confidence                                                        189999999999   999999999999999999999


Q ss_pred             EEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCCC----------
Q 039565           80 KLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFKG----------  142 (188)
Q Consensus        80 kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~~----------  142 (188)
                      +|+|||++................++..|+|||      ++.++|+||||+++|++++ |..||......          
T Consensus       252 kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~  331 (374)
T cd05106         252 KICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRG  331 (374)
T ss_pred             EEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcc
Confidence            999999987542111111111223445699998      5889999999999999997 99888543221          


Q ss_pred             ---CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhcc
Q 039565          143 ---EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGS  181 (188)
Q Consensus       143 ---~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~  181 (188)
                         ..+...+..+.+++..||+.+|.+|||+++|+++|+++.
T Consensus       332 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~  373 (374)
T cd05106         332 YQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL  373 (374)
T ss_pred             cCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence               111223578899999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=1e-33  Score=220.81  Aligned_cols=175  Identities=18%  Similarity=0.254  Sum_probs=139.7

Q ss_pred             cccccCCCeeeeccc--CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +..++||||+++++.  ....++++||+++|+|.+++ ....            |++.||+|||+   .+++||||||+|
T Consensus        63 l~~l~h~niv~~~g~~~~~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~---~~iiH~dlkp~N  139 (316)
T cd05108          63 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEE---RRLVHRDLAARN  139 (316)
T ss_pred             HHhCCCCCCCeEEEEEcCCCceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHh---cCeeccccchhh
Confidence            567899999999998  67788999999999999998 3221            99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCCC-
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFKG-  142 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~~-  142 (188)
                      |+++.++.+||+|||+++...............++..|++||      ++.++|+||||+++|++++ |..||+..... 
T Consensus       140 ill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~  219 (316)
T cd05108         140 VLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE  219 (316)
T ss_pred             eEecCCCcEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence            999999999999999998653222111112223345688988      5788999999999999997 88888642211 


Q ss_pred             -----------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          143 -----------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       143 -----------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                                 ..+......+.+++..||+.+|++||++.+++..|......
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~  271 (316)
T cd05108         220 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD  271 (316)
T ss_pred             HHHHHhCCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcC
Confidence                       11223456788999999999999999999999998876654

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=3.1e-34  Score=225.98  Aligned_cols=166  Identities=22%  Similarity=0.319  Sum_probs=145.4

Q ss_pred             cccccCCCeeeeccc---CCc-cEEEEecCCCCChhhhc-CCcc-------------cHHHHHHHHhcCCCCCcEEeCCC
Q 039565            6 RNKLTGPLLVELIGK---QKN-NALELGFRGNPELVDQQ-GKEE-------------VCCPGLEYLHQGLKHPIIQRDMK   67 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~-~~lv~e~~~~~~L~~~~-~~~~-------------~i~~~l~~Lh~~~~~~i~h~dl~   67 (188)
                      +++++|||||.+.+.   ++. .+++|+||+||++.+.+ ++.+             |++.|+.|||+   ..|+|||+|
T Consensus        57 is~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~---~~iLHRDlK  133 (426)
T KOG0589|consen   57 LSKLLHPNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHE---NRVLHRDLK  133 (426)
T ss_pred             HHhccCCCeeeeccchhcCCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHh---hhhhcccch
Confidence            578999999999999   555 89999999999999999 3333             99999999998   999999999


Q ss_pred             CCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC
Q 039565           68 STNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK  141 (188)
Q Consensus        68 ~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~  141 (188)
                      +.||+++.++.++++|||+++......  ....+..||+.|++||      +..++|||||||++|||++-+.+|+....
T Consensus       134 ~~Nifltk~~~VkLgDfGlaK~l~~~~--~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m  211 (426)
T KOG0589|consen  134 CANIFLTKDKKVKLGDFGLAKILNPED--SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM  211 (426)
T ss_pred             hhhhhccccCceeecchhhhhhcCCch--hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch
Confidence            999999999999999999999764222  2456789999999999      79999999999999999999988865432


Q ss_pred             ------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          142 ------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       142 ------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                                  ...+...+..+..++..|++.+|..||++.+++.+
T Consensus       212 ~~Li~ki~~~~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  212 SELILKINRGLYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             HHHHHHHhhccCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence                        33566778899999999999999999999999875

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=8.1e-34  Score=210.95  Aligned_cols=154  Identities=25%  Similarity=0.351  Sum_probs=133.6

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      |+.+.||.++++++.   ..++++||||+++|.|.+++++.+            |++.||+|||+   .+|++|||||+|
T Consensus        98 L~~v~~PFlv~l~~t~~d~~~lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~---~~iiYRDLKPEN  174 (355)
T KOG0616|consen   98 LKAVSHPFLVKLYGTFKDNSNLYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHS---LDIIYRDLKPEN  174 (355)
T ss_pred             HhhccCceeEEEEEeeccCCeEEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHh---cCeeeccCChHH
Confidence            567889999999987   889999999999999999994432            99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC---
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK---  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~---  141 (188)
                      ||+|.+|.+|++|||+++...     ....+.+||+.|+|||      +..++|.||||+++|||+.|.+||-....   
T Consensus       175 iLlD~~G~iKitDFGFAK~v~-----~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~i  249 (355)
T KOG0616|consen  175 LLLDQNGHIKITDFGFAKRVS-----GRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQI  249 (355)
T ss_pred             eeeccCCcEEEEeccceEEec-----CcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHH
Confidence            999999999999999998643     2366789999999999      68899999999999999999999954332   


Q ss_pred             --------CCcCHHHHHHHHHHHHHccCcCCCCC
Q 039565          142 --------GEFDIISVEKAVEIAMASVSSKVNRR  167 (188)
Q Consensus       142 --------~~~~~~~~~~~~~l~~~cl~~~p~~R  167 (188)
                              -.++......+.+++...++.|-.+|
T Consensus       250 Y~KI~~~~v~fP~~fs~~~kdLl~~LL~vD~t~R  283 (355)
T KOG0616|consen  250 YEKILEGKVKFPSYFSSDAKDLLKKLLQVDLTKR  283 (355)
T ss_pred             HHHHHhCcccCCcccCHHHHHHHHHHHhhhhHhh
Confidence                    12455566778889999999888888

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=4.3e-33  Score=211.73  Aligned_cols=171  Identities=24%  Similarity=0.253  Sum_probs=137.6

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc----c---------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE----E---------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~----~---------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +.+++||||++++++   ....++++||+++++|.+++ ...    .         |++.||+|||+   .+++|+|+||
T Consensus        56 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp  132 (263)
T cd05052          56 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAA  132 (263)
T ss_pred             HHhCCCCChhheEEEEcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCc
Confidence            567899999999998   77889999999999999998 221    1         99999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccC-
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSF-  140 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~-  140 (188)
                      +||+++.++.++++|||.+...... .........++..|++||      ++.++|+||||+++|++++ |..||+... 
T Consensus       133 ~nil~~~~~~~kl~df~~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~  211 (263)
T cd05052         133 RNCLVGENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL  211 (263)
T ss_pred             ceEEEcCCCcEEeCCCccccccccc-eeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH
Confidence            9999999999999999998754311 111111122345688888      5678999999999999998 888875321 


Q ss_pred             -----------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhc
Q 039565          141 -----------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQG  180 (188)
Q Consensus       141 -----------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~  180 (188)
                                 ..+.+...+..+.+++.+||+.+|++|||+.+++++|+.+
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         212 SQVYELLEKGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence                       2223344567899999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=2.4e-33  Score=220.15  Aligned_cols=166  Identities=21%  Similarity=0.300  Sum_probs=135.1

Q ss_pred             CcccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-cc-----------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            5 NRNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-EE-----------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      .+.+++||||++++++   .+..+++|||+++++|.+++.. ..           |++.||.|||+.  .+++|+|+||+
T Consensus        56 ~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~--~~ivH~dlkp~  133 (331)
T cd06649          56 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPS  133 (331)
T ss_pred             HHHHCCCCCCCeEEEEEEECCEEEEEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhc--CCEEcCCCChh
Confidence            3578899999999998   7789999999999999999822 21           899999999971  36999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCCC
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKGE  143 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~~  143 (188)
                      ||+++.++.++|+|||++.....    .......|+..|++||      ++.++|+||||+++|++++|+.||......+
T Consensus       134 Nil~~~~~~~kl~Dfg~~~~~~~----~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~  209 (331)
T cd06649         134 NILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKE  209 (331)
T ss_pred             hEEEcCCCcEEEccCcccccccc----cccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            99999999999999998864321    1223456888999999      5788999999999999999999985321100


Q ss_pred             -----------------------------------------------------------cCHHHHHHHHHHHHHccCcCC
Q 039565          144 -----------------------------------------------------------FDIISVEKAVEIAMASVSSKV  164 (188)
Q Consensus       144 -----------------------------------------------------------~~~~~~~~~~~l~~~cl~~~p  164 (188)
                                                                                 .....+..+.+++.+||+.+|
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P  289 (331)
T cd06649         210 LEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNP  289 (331)
T ss_pred             HHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCc
Confidence                                                                       001234678899999999999


Q ss_pred             CCCCCHHHHHHH
Q 039565          165 NRRPLMNQVVMV  176 (188)
Q Consensus       165 ~~Rps~~~i~~~  176 (188)
                      ++|||++++++.
T Consensus       290 ~~Rpt~~ell~h  301 (331)
T cd06649         290 AERADLKMLMNH  301 (331)
T ss_pred             ccCCCHHHHhcC
Confidence            999999999874

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=4.9e-33  Score=210.77  Aligned_cols=171  Identities=22%  Similarity=0.253  Sum_probs=138.3

Q ss_pred             cccccCCCeeeeccc--CCccEEEEecCCCCChhhhcCCc-c-----------cHHHHHHHHhcCCCCCcEEeCCCCCcE
Q 039565            6 RNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQGKE-E-----------VCCPGLEYLHQGLKHPIIQRDMKSTNI   71 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~~~~-~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~ni   71 (188)
                      +.+++||||++++++  .+..++++||+++++|.+++.+. .           |++.|++|||+   .+++|+|+||.||
T Consensus        50 l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~ni  126 (257)
T cd05116          50 MQQLDNPYIVRMIGICEAESWMLVMELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEE---TNFVHRDLAARNV  126 (257)
T ss_pred             HHhCCCCCcceEEEEEcCCCcEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchhhE
Confidence            567899999999998  77889999999999999998322 1           99999999999   9999999999999


Q ss_pred             EEccCCceEEecccCcccccCCCCCcc-eeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCC--
Q 039565           72 LLNEKVQAKLADFGQSRISPVEGGTHM-STTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFK--  141 (188)
Q Consensus        72 ll~~~~~~kl~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~--  141 (188)
                      +++.++.++++|||.+........... .....++..|++||      .+.++|+||||+++|++++ |..||.....  
T Consensus       127 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~  206 (257)
T cd05116         127 LLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNE  206 (257)
T ss_pred             EEcCCCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            999999999999999875432211111 11122345788998      4668999999999999998 8888864321  


Q ss_pred             ----------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhh
Q 039565          142 ----------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQ  179 (188)
Q Consensus       142 ----------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~  179 (188)
                                .+.+...+..+.+++.+||+.+|++||++++|.+.|++
T Consensus       207 ~~~~i~~~~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~  254 (257)
T cd05116         207 VTQMIESGERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN  254 (257)
T ss_pred             HHHHHHCCCCCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence                      22344567789999999999999999999999999976

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=4.3e-34  Score=217.16  Aligned_cols=169  Identities=27%  Similarity=0.317  Sum_probs=129.3

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CC--cc-----------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GK--EE-----------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~--~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +++++||||++++|+   .+..++|+||+++|+|.+++ ..  ..           |++.||.|||+   .+++|+++++
T Consensus        55 l~~l~h~ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~---~~iiH~~l~~  131 (259)
T PF07714_consen   55 LRKLRHPNIVKLYGFCIENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHS---NNIIHGNLSP  131 (259)
T ss_dssp             HHTHSBTTBE-EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHH---TTEEEST-SG
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---cccccccccc
Confidence            567899999999999   66789999999999999999 33  12           99999999999   8999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCC
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFK  141 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~  141 (188)
                      .||+++.++.+||+|||++....................|++||      ++.++||||||+++||+++ |..|+.....
T Consensus       132 ~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~  211 (259)
T PF07714_consen  132 SNILLDSNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN  211 (259)
T ss_dssp             GGEEEETTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999999999999999887542111111122234556788998      5889999999999999999 6788753211


Q ss_pred             ------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHH
Q 039565          142 ------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVR  177 (188)
Q Consensus       142 ------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l  177 (188)
                                  ...+...+..+.+++..||..+|++|||+++|++.|
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  212 EEIIEKLKQGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             HHHHHHHHTTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             ccccccccccccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence                        123334567899999999999999999999999876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=1.1e-33  Score=221.33  Aligned_cols=165  Identities=19%  Similarity=0.246  Sum_probs=136.7

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||+++++.   .+..++||||+++++|..++ ....           |++.||+|||+   .+++||||||+|
T Consensus        49 l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~ivHrDlkp~N  125 (323)
T cd05571          49 LQNTRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHS---CDVVYRDLKLEN  125 (323)
T ss_pred             HHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHH
Confidence            467899999999887   78899999999999999988 3221           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC---
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK---  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~---  141 (188)
                      |+++.++.+||+|||+++....  .........|+..|+|||      ++.++|+|||||++|+|++|..||.....   
T Consensus       126 Ill~~~~~~kl~DfG~a~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~  203 (323)
T cd05571         126 LMLDKDGHIKITDFGLCKEGIS--DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL  203 (323)
T ss_pred             EEECCCCCEEEeeCCCCccccc--CCCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHH
Confidence            9999999999999999864221  112233467899999999      57889999999999999999999854321   


Q ss_pred             --------CCcCHHHHHHHHHHHHHccCcCCCCCC-----CHHHHHH
Q 039565          142 --------GEFDIISVEKAVEIAMASVSSKVNRRP-----LMNQVVM  175 (188)
Q Consensus       142 --------~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~i~~  175 (188)
                              ..++...+..+.+++..||+.||++||     ++.++++
T Consensus       204 ~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~  250 (323)
T cd05571         204 FELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME  250 (323)
T ss_pred             HHHHHcCCCCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence                    123344567889999999999999999     7888875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=3.4e-33  Score=215.08  Aligned_cols=175  Identities=17%  Similarity=0.197  Sum_probs=140.4

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcC-Cc---------------c---------cHHHHHHHHhcCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQG-KE---------------E---------VCCPGLEYLHQGL   57 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~-~~---------------~---------~i~~~l~~Lh~~~   57 (188)
                      +.+++||||+++++.   ....++++||+++++|.+++. ..               .         |++.||+|||+  
T Consensus        61 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~--  138 (288)
T cd05093          61 LTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS--  138 (288)
T ss_pred             HHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh--
Confidence            567899999999988   788999999999999999882 11               1         89999999999  


Q ss_pred             CCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh
Q 039565           58 KHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT  131 (188)
Q Consensus        58 ~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~  131 (188)
                       .+++|||+||+||+++.++.++++|||.+................++..|++||      ++.++|+||||+++|+|++
T Consensus       139 -~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t  217 (288)
T cd05093         139 -QHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT  217 (288)
T ss_pred             -CCeeecccCcceEEEccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHh
Confidence             999999999999999999999999999987442111111112233456789998      5778999999999999998


Q ss_pred             -CCccccccCC------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          132 -GILTVDLSFK------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       132 -g~~p~~~~~~------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                       |..||.....            ...+...+..+.+++.+||+.+|.+|||++++++.|+++...
T Consensus       218 ~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~  282 (288)
T cd05093         218 YGKQPWYQLSNNEVIECITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA  282 (288)
T ss_pred             CCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence             8888753221            112223456899999999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=6.1e-33  Score=209.48  Aligned_cols=171  Identities=20%  Similarity=0.235  Sum_probs=134.8

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||++++++   ....++++||+++++|.+++ ....            |++.||.|||+   .+++|+|++|.
T Consensus        47 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~  123 (252)
T cd05084          47 LKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLES---KHCIHRDLAAR  123 (252)
T ss_pred             HHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchh
Confidence            467899999999988   77889999999999999998 2221            99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccC--
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSF--  140 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~--  140 (188)
                      ||+++.++.++++|||.+.................+..|++||      ++.++|+||||+++|++++ |..||+...  
T Consensus       124 nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~  203 (252)
T cd05084         124 NCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ  203 (252)
T ss_pred             eEEEcCCCcEEECccccCcccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH
Confidence            9999999999999999886432110000001112234588888      4678999999999999997 777774321  


Q ss_pred             ----------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhh
Q 039565          141 ----------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQ  179 (188)
Q Consensus       141 ----------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~  179 (188)
                                ....+...+..+.+++.+|++.+|++|||++++.++|+.
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~  252 (252)
T cd05084         204 QTREAIEQGVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQS  252 (252)
T ss_pred             HHHHHHHcCCCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence                      122334456789999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.1e-34  Score=221.40  Aligned_cols=165  Identities=24%  Similarity=0.281  Sum_probs=134.6

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||+++++.   .+..+++|||+++|+|.+++ .+..           |++.||.|||+   .+++||||||+|
T Consensus        47 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~HrDlkp~N  123 (312)
T cd05585          47 LAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQREGRFDLSRARFYTAELLCALENLHK---FNVIYRDLKPEN  123 (312)
T ss_pred             HHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHH
Confidence            567899999999887   78899999999999999998 3222           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC---
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK---  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~---  141 (188)
                      |+++.++.++++|||+++....  .........|+..|+|||      ++.++|+|||||++|+|++|..||.....   
T Consensus       124 ili~~~~~~kl~Dfg~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~  201 (312)
T cd05585         124 ILLDYQGHIALCDFGLCKLNMK--DDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEM  201 (312)
T ss_pred             eEECCCCcEEEEECcccccCcc--CCCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHH
Confidence            9999999999999999874321  112233457889999999      57889999999999999999999854221   


Q ss_pred             --------CCcCHHHHHHHHHHHHHccCcCCCCCCC---HHHHHH
Q 039565          142 --------GEFDIISVEKAVEIAMASVSSKVNRRPL---MNQVVM  175 (188)
Q Consensus       142 --------~~~~~~~~~~~~~l~~~cl~~~p~~Rps---~~~i~~  175 (188)
                              ..++...+..+.+++..||+.+|.+||+   +.+++.
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~  246 (312)
T cd05585         202 YRKILQEPLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKN  246 (312)
T ss_pred             HHHHHcCCCCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence                    1233345567889999999999999985   555544

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=7.3e-34  Score=212.02  Aligned_cols=165  Identities=19%  Similarity=0.195  Sum_probs=133.3

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-cc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-EE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      |++++|||+|.++++   ...++||+|||+..-|.+.-.. .+           |++.|+.|+|+   .+++|||+||+|
T Consensus        55 LKqLkH~NLVnLiEVFrrkrklhLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk---~n~IHRDIKPEN  131 (396)
T KOG0593|consen   55 LKQLKHENLVNLIEVFRRKRKLHLVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHK---NNCIHRDIKPEN  131 (396)
T ss_pred             HHhcccchHHHHHHHHHhcceeEEEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhh---cCeecccCChhh
Confidence            568999999999999   8899999999997444443322 12           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccC---
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSF---  140 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~---  140 (188)
                      |+++.+|.+|++|||+++....  ....-+.+.+|.+|.|||       |+..+|||++||++.||++|.+.|....   
T Consensus       132 ILit~~gvvKLCDFGFAR~L~~--pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiD  209 (396)
T KOG0593|consen  132 ILITQNGVVKLCDFGFARTLSA--PGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDID  209 (396)
T ss_pred             eEEecCCcEEeccchhhHhhcC--CcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHH
Confidence            9999999999999999997542  333455678899999999       7899999999999999999997442111   


Q ss_pred             ------------------------------------CCCc---CHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          141 ------------------------------------KGEF---DIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       141 ------------------------------------~~~~---~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                                          .+..   -...+..+.+++..|++.||.+|++-+|++.
T Consensus       210 QLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~  283 (396)
T KOG0593|consen  210 QLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH  283 (396)
T ss_pred             HHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence                                                0001   1123446789999999999999999999875

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=8.4e-33  Score=210.38  Aligned_cols=172  Identities=22%  Similarity=0.253  Sum_probs=138.4

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-c---c---------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-E---E---------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~---~---------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||+++++.   ....++++||+++++|.+++.. .   .         |++.|+.|||+   .+++|+|++|.
T Consensus        59 l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~di~p~  135 (266)
T cd05033          59 MGQFDHPNIIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSE---MNYVHRDLAAR  135 (266)
T ss_pred             HHhCCCCCcceEeEEEecCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcc
Confidence            567899999999998   7788999999999999999822 1   1         99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccC--
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSF--  140 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~--  140 (188)
                      ||+++.++.++++|||++................++..|++||      ++.++|+||||+++|++++ |..||....  
T Consensus       136 nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~  215 (266)
T cd05033         136 NILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ  215 (266)
T ss_pred             eEEEcCCCCEEECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH
Confidence            9999999999999999987653111111111223345688888      4778999999999999997 888874321  


Q ss_pred             ----------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhc
Q 039565          141 ----------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQG  180 (188)
Q Consensus       141 ----------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~  180 (188)
                                ..+.+...+..+.+++.+||+.+|++||++++|+++|+++
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         216 DVIKAVEDGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence                      1122334567899999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=6.2e-33  Score=211.54  Aligned_cols=172  Identities=22%  Similarity=0.240  Sum_probs=134.7

Q ss_pred             cccccCCCeeeeccc---------CCccEEEEecCCCCChhhhc--CC----c---c---------cHHHHHHHHhcCCC
Q 039565            6 RNKLTGPLLVELIGK---------QKNNALELGFRGNPELVDQQ--GK----E---E---------VCCPGLEYLHQGLK   58 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---------~~~~~lv~e~~~~~~L~~~~--~~----~---~---------~i~~~l~~Lh~~~~   58 (188)
                      +.+++||||+++++.         ....++++||+++|+|.+++  ..    .   .         |++.||+|||+   
T Consensus        54 l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---  130 (272)
T cd05075          54 MKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSS---  130 (272)
T ss_pred             HHhCCCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHH---
Confidence            567899999999886         12468999999999999887  11    1   1         89999999999   


Q ss_pred             CCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-
Q 039565           59 HPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-  131 (188)
Q Consensus        59 ~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-  131 (188)
                      .+++|+|+||+||+++.++.++++|||+++...............++..|++||      ++.++|+||||+++|++++ 
T Consensus       131 ~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~  210 (272)
T cd05075         131 KSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATR  210 (272)
T ss_pred             CCeeccccchhheEEcCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcC
Confidence            999999999999999999999999999987543211111112234456688887      5788999999999999998 


Q ss_pred             CCccccccCC------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhc
Q 039565          132 GILTVDLSFK------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQG  180 (188)
Q Consensus       132 g~~p~~~~~~------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~  180 (188)
                      |..||.....            ...+...+..+.+++..||+.+|++|||++++++.|+++
T Consensus       211 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         211 GQTPYPGVENSEIYDYLRQGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             CCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            7788853211            112233456789999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=4.3e-33  Score=220.43  Aligned_cols=166  Identities=23%  Similarity=0.312  Sum_probs=135.0

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-cc-------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-EE-------VCCPGLEYLHQGLKHPIIQRDMKSTNILLN   74 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~~-------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~   74 (188)
                      +.+++|+||++++++   ....++++||+++++|...... ..       |++.||.|||+   .+++||||||+||+++
T Consensus       126 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~  202 (353)
T PLN00034        126 LRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTHIADEQFLADVARQILSGIAYLHR---RHIVHRDIKPSNLLIN  202 (353)
T ss_pred             HHhCCCCCcceeeeEeccCCeEEEEEecCCCCcccccccCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEc
Confidence            567899999999998   7788999999999999776521 11       99999999999   9999999999999999


Q ss_pred             cCCceEEecccCcccccCCCCCcceeeecccccccCCCC-----------CCccchHHHHHHHHHHHhCCccccccCCC-
Q 039565           75 EKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTEL-----------TEKSDVDSFEIVILEIITGILTVDLSFKG-  142 (188)
Q Consensus        75 ~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~-----------~~~~di~s~G~~l~~~~~g~~p~~~~~~~-  142 (188)
                      .++.+||+|||++.....  .........|+..|++||.           +.++|||||||++|+|++|..||...... 
T Consensus       203 ~~~~~kL~DfG~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~  280 (353)
T PLN00034        203 SAKNVKIADFGVSRILAQ--TMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGD  280 (353)
T ss_pred             CCCCEEEcccccceeccc--ccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc
Confidence            999999999999875421  1112234568889999993           24799999999999999999999632211 


Q ss_pred             --------------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          143 --------------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       143 --------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                                    +.+...+..+.+++..||+.+|++|||++++++.
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h  328 (353)
T PLN00034        281 WASLMCAICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH  328 (353)
T ss_pred             HHHHHHHHhccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                          1223345688999999999999999999999874

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2e-33  Score=219.95  Aligned_cols=168  Identities=26%  Similarity=0.317  Sum_probs=137.1

Q ss_pred             cccccCCCeeeeccc-----CCccEEEEecCCCCChhhhc-CCc--c---------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK-----QKNNALELGFRGNPELVDQQ-GKE--E---------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-----~~~~~lv~e~~~~~~L~~~~-~~~--~---------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      |++++|||||+++++     .++.|||+|||..|.+...= +..  .         ++..||+|||.   .+||||||||
T Consensus       162 lKkl~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~---QgiiHRDIKP  238 (576)
T KOG0585|consen  162 LKKLHHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHY---QGIIHRDIKP  238 (576)
T ss_pred             HHhcCCcCeeEEEEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHh---cCeeccccch
Confidence            678999999999999     78999999999988775443 222  1         89999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCC---CCCcceeeecccccccCCC----------CCCccchHHHHHHHHHHHhCCcc
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVE---GGTHMSTTIAGTAGFLNTE----------LTEKSDVDSFEIVILEIITGILT  135 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~---~~~~~~~~~~~~~~~~~pe----------~~~~~di~s~G~~l~~~~~g~~p  135 (188)
                      +|+|++++|++||+|||++......   +.........||+.++|||          .+.+.||||+||++|-++-|+.|
T Consensus       239 sNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~P  318 (576)
T KOG0585|consen  239 SNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLP  318 (576)
T ss_pred             hheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCC
Confidence            9999999999999999998754322   1222233478999999999          25689999999999999999999


Q ss_pred             ccccCC-----------CCcC--HHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          136 VDLSFK-----------GEFD--IISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       136 ~~~~~~-----------~~~~--~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                      |-....           -+++  .+..+.+.+++..+|.+||++|.+..+|...
T Consensus       319 F~~~~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~H  372 (576)
T KOG0585|consen  319 FFDDFELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLH  372 (576)
T ss_pred             cccchHHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheec
Confidence            854221           1122  2457789999999999999999999988654

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-33  Score=220.97  Aligned_cols=163  Identities=20%  Similarity=0.227  Sum_probs=136.5

Q ss_pred             ccccc-CCCeeeeccc---CC-ccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCC
Q 039565            6 RNKLT-GPLLVELIGK---QK-NNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMK   67 (188)
Q Consensus         6 l~~l~-Hpniv~~~~~---~~-~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~   67 (188)
                      |.+|+ |||||++.++   .+ ++++|||||+. +|.+.+ ++..            |+++||+|+|.   +|+.|||+|
T Consensus        62 L~kln~hpniikL~Evi~d~~~~L~fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk---~GfFHRDlK  137 (538)
T KOG0661|consen   62 LRKLNPHPNIIKLKEVIRDNDRILYFVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHK---HGFFHRDLK  137 (538)
T ss_pred             HHhcCCCCcchhhHHHhhccCceEeeeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHh---cCcccccCC
Confidence            56788 9999999999   34 89999999994 999999 4433            99999999999   999999999


Q ss_pred             CCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           68 STNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        68 ~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      |+|||+..+..+||+|||+++...   +...-+.+..|.+|+|||       |+.+.|+|++||+++|+.+-++.|....
T Consensus       138 PENiLi~~~~~iKiaDFGLARev~---SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~s  214 (538)
T KOG0661|consen  138 PENILISGNDVIKIADFGLAREVR---SKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGAS  214 (538)
T ss_pred             hhheEecccceeEecccccccccc---cCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCc
Confidence            999999999999999999998543   344456678889999999       7999999999999999999887553210


Q ss_pred             ----------------CCC--------------------------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          141 ----------------KGE--------------------------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       141 ----------------~~~--------------------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                                      ..+                          .+ .++..+.+++..|+.-||.+|||+++.+++
T Consensus       215 E~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p-~~s~~~~~li~~ll~WDP~kRpTA~~al~~  291 (538)
T KOG0661|consen  215 EIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLP-NASSEAASLIERLLAWDPDKRPTASQALQH  291 (538)
T ss_pred             HHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCc-ccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence                            000                          12 256678899999999999999999999874

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=8e-33  Score=212.35  Aligned_cols=173  Identities=20%  Similarity=0.244  Sum_probs=136.5

Q ss_pred             cccccCCCeeeeccc-----CCccEEEEecCCCCChhhhcCC--cc---------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK-----QKNNALELGFRGNPELVDQQGK--EE---------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-----~~~~~lv~e~~~~~~L~~~~~~--~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +++++||||++++++     ....+++|||+++++|.+++..  ..         |++.||.|||+   .+++|+|+||+
T Consensus        60 l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~---~~i~H~dlkp~  136 (283)
T cd05080          60 LKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHS---QHYIHRDLAAR  136 (283)
T ss_pred             HHhCCCCCEeeEEEEEecCCCceEEEEecCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccChh
Confidence            567899999999987     3457899999999999999832  22         99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCc-ceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCC
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTH-MSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKG  142 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~  142 (188)
                      ||+++.++.++++|||++.......... ......++..|++||      .+.++|+||||+++|++++|..|+......
T Consensus       137 Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~  216 (283)
T cd05080         137 NVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKK  216 (283)
T ss_pred             eEEEcCCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcch
Confidence            9999999999999999987543211111 111223445678887      578899999999999999999876432110


Q ss_pred             ---------------------------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhcc
Q 039565          143 ---------------------------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGS  181 (188)
Q Consensus       143 ---------------------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~  181 (188)
                                                 ..+...+..+.+++..||+.+|++|||+++++++|+.+.
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~  282 (283)
T cd05080         217 FEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH  282 (283)
T ss_pred             hhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence                                       011223568999999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=9.6e-33  Score=209.08  Aligned_cols=173  Identities=21%  Similarity=0.260  Sum_probs=139.1

Q ss_pred             cccccCCCeeeeccc--CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCcE
Q 039565            6 RNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTNI   71 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~ni   71 (188)
                      +++++||||++++++  .+..++++||+.+++|.+++ +...           |++.||+|||+   .+++|+|++|+||
T Consensus        50 l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~ni  126 (257)
T cd05060          50 MAQLDHPCIVRLIGVCKGEPLMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLES---KHFVHRDLAARNV  126 (257)
T ss_pred             HHhcCCCCeeeEEEEEcCCceEEEEEeCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhh---cCeeccCcccceE
Confidence            567899999999999  77789999999999999999 2221           99999999999   9999999999999


Q ss_pred             EEccCCceEEecccCcccccCCCCCc-ceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCC--
Q 039565           72 LLNEKVQAKLADFGQSRISPVEGGTH-MSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFK--  141 (188)
Q Consensus        72 ll~~~~~~kl~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~--  141 (188)
                      +++.++.++++|||.+.......... ......++..|++||      ++.++|+||||+++|++++ |..||+....  
T Consensus       127 li~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~  206 (257)
T cd05060         127 LLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAE  206 (257)
T ss_pred             EEcCCCcEEeccccccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHH
Confidence            99999999999999987543221111 011122334688888      5778999999999999998 8899864321  


Q ss_pred             ----------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhcc
Q 039565          142 ----------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGS  181 (188)
Q Consensus       142 ----------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~  181 (188)
                                .+.+...+..+.+++.+||+.+|++||++.++++.|++..
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~  256 (257)
T cd05060         207 VIAMLESGERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP  256 (257)
T ss_pred             HHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence                      1223345578899999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=1.4e-32  Score=210.66  Aligned_cols=175  Identities=19%  Similarity=0.240  Sum_probs=139.7

Q ss_pred             cccccCCCeeeeccc--CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +..++||||++++++  ....++++||+++|+|.+++ ....            |++.||.|||+   .+++|+|+||+|
T Consensus        63 l~~~~~~~i~~~~~~~~~~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~iiH~dlkp~N  139 (279)
T cd05109          63 MAGVGSPYVCRLLGICLTSTVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEE---VRLVHRDLAARN  139 (279)
T ss_pred             HHhcCCCCCceEEEEEcCCCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccce
Confidence            456889999999998  66788999999999999999 3221            99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCC--
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFK--  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~--  141 (188)
                      |+++.++.++|+|||+++...............++..|++||      ++.++|+||||+++|++++ |..||+....  
T Consensus       140 il~~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~  219 (279)
T cd05109         140 VLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE  219 (279)
T ss_pred             EEEcCCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence            999999999999999987553222111111223455788998      5778999999999999998 8888864221  


Q ss_pred             ----------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          142 ----------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       142 ----------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                                ...+...+..+.+++..||+.+|++||++.++++.|+.....
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~  271 (279)
T cd05109         220 IPDLLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARD  271 (279)
T ss_pred             HHHHHHCCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence                      112234566888999999999999999999999999877654

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=8e-33  Score=209.39  Aligned_cols=169  Identities=25%  Similarity=0.321  Sum_probs=135.0

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcC-Ccc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQG-KEE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~-~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||++++++   ....+++|||+++|+|.+++. ...            |++.||+|||+   .+++|+|++|+
T Consensus        53 l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~  129 (256)
T cd05114          53 MMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLER---NSFIHRDLAAR  129 (256)
T ss_pred             HHHCCCCCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcc
Confidence            567899999999988   778899999999999999983 221            89999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCCC
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFKG  142 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~~  142 (188)
                      ||+++.++.++++|||.+..... ..........++..|++||      ++.++|+||||+++|++++ |..||......
T Consensus       130 ni~i~~~~~~kl~d~g~~~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~  208 (256)
T cd05114         130 NCLVSSTGVVKVSDFGMTRYVLD-DEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY  208 (256)
T ss_pred             eEEEcCCCeEEECCCCCccccCC-CceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH
Confidence            99999999999999998864321 1111111223445688888      4678999999999999999 88888543211


Q ss_pred             ------------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHh
Q 039565          143 ------------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVRE  178 (188)
Q Consensus       143 ------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~  178 (188)
                                  ..+...+..+.+++..||+.+|++|||++++++.|.
T Consensus       209 ~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~  256 (256)
T cd05114         209 EVVEMISRGFRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAIT  256 (256)
T ss_pred             HHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence                        122334567899999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=5.4e-33  Score=212.67  Aligned_cols=171  Identities=18%  Similarity=0.189  Sum_probs=135.4

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-c------------c---------cHHHHHHHHhcCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-E------------E---------VCCPGLEYLHQGLKHP   60 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~------------~---------~i~~~l~~Lh~~~~~~   60 (188)
                      +.+++||||++++++   ....++++||+++++|.+++.+ .            .         |++.||.|||+   .+
T Consensus        63 l~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~  139 (277)
T cd05062          63 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNA---NK  139 (277)
T ss_pred             HHhCCCCCeeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CC
Confidence            456889999999998   6788999999999999998821 1            0         89999999999   99


Q ss_pred             cEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CC
Q 039565           61 IIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GI  133 (188)
Q Consensus        61 i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~  133 (188)
                      ++|+|+||+||+++.++.++++|||++................++..|++||      ++.++|+||||+++|++++ |.
T Consensus       140 ~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~  219 (277)
T cd05062         140 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE  219 (277)
T ss_pred             cccCCcchheEEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCC
Confidence            9999999999999999999999999886432111111111223456789998      5788999999999999998 67


Q ss_pred             ccccccCC------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhh
Q 039565          134 LTVDLSFK------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQ  179 (188)
Q Consensus       134 ~p~~~~~~------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~  179 (188)
                      .||.....            ...+...+..+.+++.+||+.+|++|||+.++++.|+.
T Consensus       220 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~  277 (277)
T cd05062         220 QPYQGMSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE  277 (277)
T ss_pred             CCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence            77753221            11223345678999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=1e-32  Score=209.27  Aligned_cols=170  Identities=23%  Similarity=0.285  Sum_probs=136.6

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-------------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-------------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-------------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +.+++||||+++++.   .+..++++||+++++|.+++ ....             |++.||+|||+   .+++|+|++|
T Consensus        55 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p  131 (261)
T cd05072          55 MKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRDLRA  131 (261)
T ss_pred             HHhCCCCCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccch
Confidence            467899999999888   77889999999999999998 2211             99999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCC
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFK  141 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~  141 (188)
                      +||+++.++.++++|||++...... .........++..|++||      ++.++|+||||+++|++++ |..||.....
T Consensus       132 ~nili~~~~~~~l~dfg~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~  210 (261)
T cd05072         132 ANVLVSESLMCKIADFGLARVIEDN-EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSN  210 (261)
T ss_pred             hhEEecCCCcEEECCCccceecCCC-ceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCH
Confidence            9999999999999999998754311 111112223455688888      4678999999999999998 8888853211


Q ss_pred             ------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhh
Q 039565          142 ------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQ  179 (188)
Q Consensus       142 ------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~  179 (188)
                                  .+.....+..+.+++.+|++.+|++||+++++.+.|+.
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  260 (261)
T cd05072         211 SDVMSALQRGYRMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD  260 (261)
T ss_pred             HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence                        11222345688999999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.7e-33  Score=217.28  Aligned_cols=163  Identities=24%  Similarity=0.259  Sum_probs=135.6

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-cc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-EE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||+++++.   ....+++|||+++++|.+++.+ ..           |++.||.|||+   .+++||||||+|
T Consensus        55 l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~N  131 (291)
T cd05612          55 LKEVSHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHS---KEIVYRDLKPEN  131 (291)
T ss_pred             HHhCCCCcHhhhHhhhccCCeEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHH
Confidence            567899999999988   7788999999999999999822 21           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC---
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK---  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~---  141 (188)
                      |+++.++.++++|||++.....     ......|++.|+|||      ++.++|+||||+++|+|++|..||.....   
T Consensus       132 Ili~~~~~~kl~Dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~  206 (291)
T cd05612         132 ILLDKEGHIKLTDFGFAKKLRD-----RTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGI  206 (291)
T ss_pred             eEECCCCCEEEEecCcchhccC-----CcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            9999999999999999875421     122346888999999      57889999999999999999999865321   


Q ss_pred             --------CCcCHHHHHHHHHHHHHccCcCCCCCCC-----HHHHHHH
Q 039565          142 --------GEFDIISVEKAVEIAMASVSSKVNRRPL-----MNQVVMV  176 (188)
Q Consensus       142 --------~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~i~~~  176 (188)
                              ..++......+.+++..||+.||.+||+     ++++++.
T Consensus       207 ~~~i~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h  254 (291)
T cd05612         207 YEKILAGKLEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH  254 (291)
T ss_pred             HHHHHhCCcCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence                    1233344667899999999999999995     8887763

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=1.1e-32  Score=221.29  Aligned_cols=135  Identities=21%  Similarity=0.233  Sum_probs=107.8

Q ss_pred             cHHHHHHHHhcCCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccc
Q 039565           45 VCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSD  118 (188)
Q Consensus        45 ~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~d  118 (188)
                      |++.||.|||+   .+++|+|+||+||+++.++.+|++|||+++...............++..|++||      ++.++|
T Consensus       245 qi~~aL~~LH~---~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  321 (400)
T cd05105         245 QVARGMEFLAS---KNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSD  321 (400)
T ss_pred             HHHHHHHHHHh---CCeeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhh
Confidence            78999999999   999999999999999999999999999987543221111122334566799998      578899


Q ss_pred             hHHHHHHHHHHHh-CCccccccCC-------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          119 VDSFEIVILEIIT-GILTVDLSFK-------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       119 i~s~G~~l~~~~~-g~~p~~~~~~-------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                      +||||+++|++++ |..||.....             ...+...+..+.+++..||+.+|++||++.+|.++|+.+.+
T Consensus       322 iwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~  399 (400)
T cd05105         322 VWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP  399 (400)
T ss_pred             HHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence            9999999999997 8888754221             12233456789999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=1.9e-32  Score=207.84  Aligned_cols=172  Identities=20%  Similarity=0.237  Sum_probs=137.5

Q ss_pred             cccccCCCeeeeccc--CCccEEEEecCCCCChhhhcC-Cc-c-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQG-KE-E-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~~-~~-~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++  ....++++||+++++|.+++. +. .           |++.||.|||+   .+++|+||||+|
T Consensus        49 l~~l~h~~ii~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~n  125 (257)
T cd05115          49 MHQLDNPYIVRMIGVCEAEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEG---KNFVHRDLAARN  125 (257)
T ss_pred             HHhcCCCCeEEEEEEEcCCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh---cCeeecccchhe
Confidence            567899999999999  677899999999999999982 22 1           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcc-eeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCC-
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHM-STTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFK-  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~-  141 (188)
                      |+++.++.++++|||++........... .....++..|++||      ++.++|+||||+++|++++ |..||..... 
T Consensus       126 il~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~  205 (257)
T cd05115         126 VLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP  205 (257)
T ss_pred             EEEcCCCcEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH
Confidence            9999999999999999875432211111 11122245688888      4678999999999999996 8888854321 


Q ss_pred             -----------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhc
Q 039565          142 -----------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQG  180 (188)
Q Consensus       142 -----------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~  180 (188)
                                 ...+...+..+.+++..||+.+|++||++.+|.+.|+..
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         206 EVMSFIEQGKRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY  255 (257)
T ss_pred             HHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence                       123334567889999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.8e-32  Score=208.78  Aligned_cols=172  Identities=22%  Similarity=0.231  Sum_probs=135.8

Q ss_pred             cccccCCCeeeeccc---CC------ccEEEEecCCCCChhhhc-CC--------cc---------cHHHHHHHHhcCCC
Q 039565            6 RNKLTGPLLVELIGK---QK------NNALELGFRGNPELVDQQ-GK--------EE---------VCCPGLEYLHQGLK   58 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~------~~~lv~e~~~~~~L~~~~-~~--------~~---------~i~~~l~~Lh~~~~   58 (188)
                      +.+++||||++++++   ..      ..++++||+++++|..++ ..        ..         |++.||+|||+   
T Consensus        55 l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~---  131 (273)
T cd05035          55 MKDFDHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSN---  131 (273)
T ss_pred             HHhCCCCCeeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHh---
Confidence            456889999999987   22      368999999999999887 11        11         99999999999   


Q ss_pred             CCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-
Q 039565           59 HPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-  131 (188)
Q Consensus        59 ~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-  131 (188)
                      .+++|+|+||+||++++++.++++|||+++...............++..|++||      ++.++|+||||+++|++++ 
T Consensus       132 ~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~  211 (273)
T cd05035         132 RNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATR  211 (273)
T ss_pred             CCeeccccchheEEECCCCeEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhC
Confidence            999999999999999999999999999987543222111122223455678888      5788999999999999998 


Q ss_pred             CCccccccCC------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhc
Q 039565          132 GILTVDLSFK------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQG  180 (188)
Q Consensus       132 g~~p~~~~~~------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~  180 (188)
                      |..||.....            ...+...+..+.+++..||+.+|++|||+.++++.|+++
T Consensus       212 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         212 GQTPYPGVENHEIYDYLRHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             CCCCCCCCCHHHHHHHHHcCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            7788753221            122334567899999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.7e-33  Score=220.49  Aligned_cols=165  Identities=20%  Similarity=0.242  Sum_probs=135.5

Q ss_pred             cccccCCCeeeeccc-----CCccEEEEecCCCCChhhhcCCcc-------------cHHHHHHHHhcCCCCCcEEeCCC
Q 039565            6 RNKLTGPLLVELIGK-----QKNNALELGFRGNPELVDQQGKEE-------------VCCPGLEYLHQGLKHPIIQRDMK   67 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~-------------~i~~~l~~Lh~~~~~~i~h~dl~   67 (188)
                      |++++||||+++.++     ...+|||||||++ +|..++...+             |++.||+|||+   .+|.|||||
T Consensus       170 Lr~l~HpNIikL~eivt~~~~~siYlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~---~gvlHRDIK  245 (560)
T KOG0600|consen  170 LRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHS---RGVLHRDIK  245 (560)
T ss_pred             HHhcCCCcccceeeEEEecCCceEEEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhh---cCeeecccc
Confidence            678999999999999     4689999999996 8999884432             99999999999   999999999


Q ss_pred             CCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           68 STNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        68 ~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      .+|||++.+|.+||+|||+++++... .....+....|.+|.+||       |+.+.|+||.||++.||+.|++.|....
T Consensus       246 ~SNiLidn~G~LKiaDFGLAr~y~~~-~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~t  324 (560)
T KOG0600|consen  246 GSNILIDNNGVLKIADFGLARFYTPS-GSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRT  324 (560)
T ss_pred             ccceEEcCCCCEEeccccceeeccCC-CCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCcc
Confidence            99999999999999999999976532 323355567888999999       7999999999999999999997442111


Q ss_pred             -------------------C--------------CCcC-------HHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          141 -------------------K--------------GEFD-------IISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       141 -------------------~--------------~~~~-------~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                         +              ..+.       ...+....+++..+|..||.+|.|+.+.++
T Consensus       325 EveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~  399 (560)
T KOG0600|consen  325 EVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ  399 (560)
T ss_pred             HHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence                               0              0011       122346779999999999999999998875

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=3.7e-33  Score=223.70  Aligned_cols=176  Identities=23%  Similarity=0.317  Sum_probs=147.8

Q ss_pred             CcccccCCCeeeeccc--CCccEEEEecCCCCChhhhcCCc-c------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            5 NRNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQGKE-E------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~~~~-~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      .+++=+|-||+-+.|+  ...+++|+.+|.+.+|..+++.. .            |+|+|+.|||.   ++|||+|||..
T Consensus       441 ~lkkTRH~NIlLFMG~~~~p~~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHA---K~IIHrDLKSn  517 (678)
T KOG0193|consen  441 VLKKTRHENILLFMGACMNPPLAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHA---KNIIHRDLKSN  517 (678)
T ss_pred             HHhhcchhhheeeehhhcCCceeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhh---hhhhhhhcccc
Confidence            4567789999999999  66669999999999999999222 2            99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC---------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE---------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe---------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      ||++.+++.+||+|||++.....-..........|...|||||         |+..+||||||+++|||++|..||....
T Consensus       518 NIFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~  597 (678)
T KOG0193|consen  518 NIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQN  597 (678)
T ss_pred             ceEEccCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCC
Confidence            9999999999999999987533222333344567888899999         7999999999999999999999996332


Q ss_pred             CCC----------------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          141 KGE----------------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       141 ~~~----------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                      .+.                ....+.+.+.+++..||..++++||++.+|+..|+.+..+
T Consensus       598 ~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~  656 (678)
T KOG0193|consen  598 RDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPS  656 (678)
T ss_pred             hhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence            211                2335677899999999999999999999999988887763

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=2.3e-33  Score=223.77  Aligned_cols=164  Identities=23%  Similarity=0.270  Sum_probs=141.9

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc---c---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE---E---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~---~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++|||||.++++   ..+.|+|+||+.+ +|..++...   +         |+..||.|||+   .+|+|||+||+|
T Consensus        55 ~r~lkHpniv~m~esfEt~~~~~vVte~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs---~rilhrd~kPqn  130 (808)
T KOG0597|consen   55 LRSLKHPNIVEMLESFETSAHLWVVTEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHS---NRILHRDMKPQN  130 (808)
T ss_pred             HHhcCCcchhhHHHhhcccceEEEEehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh---cCcccccCCcce
Confidence            467999999999999   8999999999996 999999332   2         89999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCcccccc-----
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLS-----  139 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~-----  139 (188)
                      |+++.++.+|++|||+++.+..  .........||+.|||||      ++..+|.||+||++||+.+|++||-..     
T Consensus       131 iLl~~~~~~KlcdFg~Ar~m~~--~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~L  208 (808)
T KOG0597|consen  131 ILLEKGGTLKLCDFGLARAMST--NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQL  208 (808)
T ss_pred             eeecCCCceeechhhhhhhccc--CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHH
Confidence            9999999999999999997642  333455678999999999      789999999999999999999998321     


Q ss_pred             ------CCCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          140 ------FKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       140 ------~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                            .+...+...+..+.+++...+++||.+|.|+.+++.
T Consensus       209 v~~I~~d~v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~  250 (808)
T KOG0597|consen  209 VKSILKDPVKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG  250 (808)
T ss_pred             HHHHhcCCCCCcccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence                  112234467788999999999999999999999876

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=4.3e-33  Score=218.02  Aligned_cols=165  Identities=24%  Similarity=0.277  Sum_probs=136.1

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||+++++.   .+..+++|||+++++|.+++.+.+            |++.||.|||+   .+++||||||+|
T Consensus        54 l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~N  130 (323)
T cd05584          54 LEAVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQ---QGIIYRDLKPEN  130 (323)
T ss_pred             HHhCCCCchhceeeEEecCCeEEEEEeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHH
Confidence            567899999999888   778899999999999999982222            89999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC---
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK---  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~---  141 (188)
                      |+++.++.+||+|||+++....  .........|+..|++||      ++.++|+||||+++|+|++|..||.....   
T Consensus       131 il~~~~~~~kl~Dfg~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~  208 (323)
T cd05584         131 ILLDAQGHVKLTDFGLCKESIH--EGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKT  208 (323)
T ss_pred             eEECCCCCEEEeeCcCCeeccc--CCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHH
Confidence            9999999999999998864321  111233456889999999      46789999999999999999999864321   


Q ss_pred             --------CCcCHHHHHHHHHHHHHccCcCCCCCC-----CHHHHHH
Q 039565          142 --------GEFDIISVEKAVEIAMASVSSKVNRRP-----LMNQVVM  175 (188)
Q Consensus       142 --------~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~i~~  175 (188)
                              ...+...+..+.+++..||+.+|++||     +++++++
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~  255 (323)
T cd05584         209 IDKILKGKLNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS  255 (323)
T ss_pred             HHHHHcCCCCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence                    123334466789999999999999999     7888766

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=3e-33  Score=218.96  Aligned_cols=165  Identities=20%  Similarity=0.268  Sum_probs=135.3

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||+++++.   .+..++||||+++|+|..++ +...           |++.||.|||+   .+++||||||+|
T Consensus        49 l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~N  125 (323)
T cd05595          49 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLEN  125 (323)
T ss_pred             HHhCCCCCCcceeeEEecCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHH
Confidence            467899999999887   78899999999999999888 2221           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCC--
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKG--  142 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~--  142 (188)
                      |+++.++.+||+|||++....  ..........|+..|++||      ++.++|+|||||++|++++|..||......  
T Consensus       126 Ill~~~~~~kL~Dfg~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~  203 (323)
T cd05595         126 LMLDKDGHIKITDFGLCKEGI--SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL  203 (323)
T ss_pred             EEEcCCCCEEecccHHhcccc--CCCCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHH
Confidence            999999999999999876421  1111223456889999999      478899999999999999999998543211  


Q ss_pred             ---------CcCHHHHHHHHHHHHHccCcCCCCCC-----CHHHHHH
Q 039565          143 ---------EFDIISVEKAVEIAMASVSSKVNRRP-----LMNQVVM  175 (188)
Q Consensus       143 ---------~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~i~~  175 (188)
                               .++...+..+.+++..||+.+|.+||     ++.++++
T Consensus       204 ~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~  250 (323)
T cd05595         204 FELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  250 (323)
T ss_pred             HHHHhcCCCCCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence                     12334567889999999999999998     7888775

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=1.8e-32  Score=209.81  Aligned_cols=171  Identities=18%  Similarity=0.191  Sum_probs=137.6

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc-----------------c---------cHHHHHHHHhcC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE-----------------E---------VCCPGLEYLHQG   56 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~-----------------~---------~i~~~l~~Lh~~   56 (188)
                      +.+++||||++++++   ....+++|||+++++|.+++...                 .         |++.|+.|||+ 
T Consensus        62 l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~-  140 (280)
T cd05049          62 LTNFQHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLAS-  140 (280)
T ss_pred             HHhcCCCCchheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhh-
Confidence            567899999999999   78899999999999999998211                 0         89999999999 


Q ss_pred             CCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHH
Q 039565           57 LKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEII  130 (188)
Q Consensus        57 ~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~  130 (188)
                        .+++|+|++|+||+++.++.++++|||.+................++..|+|||      ++.++|+||||+++|+++
T Consensus       141 --~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~  218 (280)
T cd05049         141 --QHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIF  218 (280)
T ss_pred             --CCeeccccccceEEEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHH
Confidence              999999999999999999999999999886432111111122234456789998      578899999999999999


Q ss_pred             h-CCccccccC------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhh
Q 039565          131 T-GILTVDLSF------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQ  179 (188)
Q Consensus       131 ~-g~~p~~~~~------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~  179 (188)
                      + |..||....            ....+...+..+.+++..||+.+|++||++.++++.|++
T Consensus       219 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~  280 (280)
T cd05049         219 TYGKQPWYGLSNEEVIECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK  280 (280)
T ss_pred             hcCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence            8 988874321            112233456789999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=1.4e-32  Score=211.73  Aligned_cols=175  Identities=21%  Similarity=0.238  Sum_probs=140.5

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc---------------------------c---------cH
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE---------------------------E---------VC   46 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~---------------------------~---------~i   46 (188)
                      +.+++||||+++++.   ....++++||+.+++|.+++...                           .         |+
T Consensus        57 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i  136 (290)
T cd05045          57 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQI  136 (290)
T ss_pred             HhhCCCCCEeeEEEEEecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHH
Confidence            567899999999988   77889999999999999987210                           0         89


Q ss_pred             HHHHHHHhcCCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchH
Q 039565           47 CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVD  120 (188)
Q Consensus        47 ~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~  120 (188)
                      +.||.|||+   .+++|||++|+||++++++.++++|||+++...............++..|++||      .+.++|+|
T Consensus       137 ~~~l~~LH~---~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~  213 (290)
T cd05045         137 SRGMQYLAE---MKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVW  213 (290)
T ss_pred             HHHHHHHHH---CCeehhhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHH
Confidence            999999999   999999999999999999999999999987542222111122233455788888      57889999


Q ss_pred             HHHHHHHHHHh-CCccccccCC------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          121 SFEIVILEIIT-GILTVDLSFK------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       121 s~G~~l~~~~~-g~~p~~~~~~------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                      |||+++|++++ |..||+....            ...+...+..+.+++..||+.+|++||++.++++.|+++..+
T Consensus       214 slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~~  289 (290)
T cd05045         214 SFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMVK  289 (290)
T ss_pred             HHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHhc
Confidence            99999999998 8888854321            112334556899999999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=1.7e-32  Score=208.68  Aligned_cols=164  Identities=19%  Similarity=0.208  Sum_probs=130.4

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcC-Ccc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQG-KEE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~-~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +..++||||++++++   ....++++||+++++|..++. +..            |++.||+|||+   .+++|+|+||+
T Consensus        58 l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~  134 (262)
T cd05077          58 MRQVSHKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLED---KDLVHGNVCTK  134 (262)
T ss_pred             HHhCCCCCEeeEEEEEecCCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhh---CCeECCCCCcc
Confidence            457899999999998   677899999999999998882 221            99999999999   99999999999


Q ss_pred             cEEEccCCc-------eEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHH-hCCc
Q 039565           70 NILLNEKVQ-------AKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEII-TGIL  134 (188)
Q Consensus        70 nill~~~~~-------~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~-~g~~  134 (188)
                      ||+++.++.       ++++|||++.....      .....++..|++||       ++.++|+||||+++|+++ .|..
T Consensus       135 Nill~~~~~~~~~~~~~~l~d~g~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~  208 (262)
T cd05077         135 NILLAREGIDGECGPFIKLSDPGIPITVLS------RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEI  208 (262)
T ss_pred             cEEEecCCccCCCCceeEeCCCCCCccccC------cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCC
Confidence            999986653       89999998764321      12234566789998       356799999999999997 5777


Q ss_pred             cccccCCCC----------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHh
Q 039565          135 TVDLSFKGE----------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVRE  178 (188)
Q Consensus       135 p~~~~~~~~----------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~  178 (188)
                      |+......+          ........+.+++..||+.+|++||++.+|++.|+
T Consensus       209 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~  262 (262)
T cd05077         209 PLKDKTLAEKERFYEGQCMLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN  262 (262)
T ss_pred             CCCCcchhHHHHHHhcCccCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence            775432111          11123467889999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.6e-32  Score=209.78  Aligned_cols=171  Identities=19%  Similarity=0.222  Sum_probs=137.5

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-c------------c---------cHHHHHHHHhcCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-E------------E---------VCCPGLEYLHQGLKHP   60 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~------------~---------~i~~~l~~Lh~~~~~~   60 (188)
                      +..++||||++++++   ....++++||+++++|.+++.. .            .         |++.||.|||+   .+
T Consensus        63 l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~  139 (277)
T cd05032          63 MKEFNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAA---KK  139 (277)
T ss_pred             HHhCCCCceeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHh---CC
Confidence            467899999999998   7889999999999999998821 0            1         89999999999   99


Q ss_pred             cEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CC
Q 039565           61 IIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GI  133 (188)
Q Consensus        61 i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~  133 (188)
                      ++|+|++|+||+++.++.++++|||.++...............++..|++||      .+.++|+||||+++|++++ |.
T Consensus       140 i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~  219 (277)
T cd05032         140 FVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAE  219 (277)
T ss_pred             ccccccChheEEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCC
Confidence            9999999999999999999999999887532111111122234556788888      5788999999999999998 88


Q ss_pred             ccccccC------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhh
Q 039565          134 LTVDLSF------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQ  179 (188)
Q Consensus       134 ~p~~~~~------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~  179 (188)
                      .||....            ....+...+..+.+++..||+.+|++|||+.++++.|+.
T Consensus       220 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  277 (277)
T cd05032         220 QPYQGLSNEEVLKFVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD  277 (277)
T ss_pred             CCCccCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence            8874321            112233456789999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.5e-32  Score=207.26  Aligned_cols=170  Identities=22%  Similarity=0.273  Sum_probs=137.4

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-------------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-------------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-------------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +.+++||||++++++   .+..++++||+++++|.+++ ...+             |++.|+.|||+   .+++|+|++|
T Consensus        55 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p  131 (261)
T cd05068          55 MKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEA---QNYIHRDLAA  131 (261)
T ss_pred             HHHCCCCCccceeEEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCc
Confidence            567899999999988   77889999999999999998 3321             89999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCC
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFK  141 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~  141 (188)
                      +||+++.++.++++|||++...... ..........+..|++||      ++.++|+||||+++|++++ |..||.....
T Consensus       132 ~Nil~~~~~~~~l~dfg~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~  210 (261)
T cd05068         132 RNVLVGENNICKVADFGLARVIKED-IYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN  210 (261)
T ss_pred             ceEEEcCCCCEEECCcceEEEccCC-cccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH
Confidence            9999999999999999998754311 111111122234688898      4778999999999999999 8888854221


Q ss_pred             ------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhh
Q 039565          142 ------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQ  179 (188)
Q Consensus       142 ------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~  179 (188)
                                  ...+...+..+.+++.+|++.+|++||+++++++.|+.
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~  260 (261)
T cd05068         211 AEVLQQVDQGYRMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED  260 (261)
T ss_pred             HHHHHHHHcCCCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence                        11233456789999999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=1.8e-32  Score=207.68  Aligned_cols=169  Identities=24%  Similarity=0.309  Sum_probs=135.1

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-c-c-----------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-E-E-----------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~-~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||++++++   ....+++|||+.+++|.+++.. . .           |++.||.|||+   .+++|+|++|.
T Consensus        53 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~  129 (256)
T cd05113          53 MMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLES---KQFIHRDLAAR  129 (256)
T ss_pred             HhcCCCCCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcc
Confidence            677899999999998   6678999999999999999822 1 1           99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCC-
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFK-  141 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~-  141 (188)
                      ||+++.++.+|++|||.+...... .........++..|++||      ++.++|+||||+++|++++ |..||..... 
T Consensus       130 nili~~~~~~kl~d~g~~~~~~~~-~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~  208 (256)
T cd05113         130 NCLVDDQGCVKVSDFGLSRYVLDD-EYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS  208 (256)
T ss_pred             eEEEcCCCCEEECCCccceecCCC-ceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH
Confidence            999999999999999988754211 111111223445688888      4778999999999999998 8888753221 


Q ss_pred             -----------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHh
Q 039565          142 -----------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVRE  178 (188)
Q Consensus       142 -----------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~  178 (188)
                                 ...+...+..+.+++..||+.+|++||++.+|++.|+
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         209 ETVEKVSQGLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence                       1122234578899999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=9.7e-33  Score=212.39  Aligned_cols=164  Identities=23%  Similarity=0.270  Sum_probs=135.0

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-C-Cc-c-----------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-G-KE-E-----------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~-~~-~-----------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +.+++||||+++.+.   .+..++++||+++|+|..++ . .. .           |++.||+|||+   .+++||||||
T Consensus        54 l~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp  130 (285)
T cd05631          54 LEKVNSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQR---ERIVYRDLKP  130 (285)
T ss_pred             HHhcCCCcEEEEEEEEccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCH
Confidence            467889999999887   77899999999999998877 2 11 1           99999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC-
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK-  141 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~-  141 (188)
                      +||+++.++.++++|||++.....   ........|+..|+|||      ++.++|+|||||++|++++|..||..... 
T Consensus       131 ~Nill~~~~~~kl~Dfg~~~~~~~---~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~  207 (285)
T cd05631         131 ENILLDDRGHIRISDLGLAVQIPE---GETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKER  207 (285)
T ss_pred             HHEEECCCCCEEEeeCCCcEEcCC---CCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcc
Confidence            999999999999999999875421   11223456888999999      57889999999999999999999964322 


Q ss_pred             --------------CCcCHHHHHHHHHHHHHccCcCCCCCCC-----HHHHHH
Q 039565          142 --------------GEFDIISVEKAVEIAMASVSSKVNRRPL-----MNQVVM  175 (188)
Q Consensus       142 --------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~i~~  175 (188)
                                    ..++...+..+.+++..||+.+|.+||+     ++++++
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~  260 (285)
T cd05631         208 VKREEVDRRVKEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ  260 (285)
T ss_pred             hhHHHHHHHhhcccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence                          1123345567889999999999999997     788887

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=1.2e-32  Score=215.53  Aligned_cols=165  Identities=24%  Similarity=0.315  Sum_probs=135.0

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCcE
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTNI   71 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~ni   71 (188)
                      +++++||||++++++   .+..++||||+++++|..++....           |++.||.|||+   .+++||||||+||
T Consensus        56 ~~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrdlkp~Ni  132 (324)
T cd05589          56 ANSERHPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHE---NKIVYRDLKLDNL  132 (324)
T ss_pred             ccccCCCChhceeeEEEcCCEEEEEEcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHe
Confidence            356789999999998   788999999999999998883322           99999999999   9999999999999


Q ss_pred             EEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC----
Q 039565           72 LLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK----  141 (188)
Q Consensus        72 ll~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~----  141 (188)
                      +++.++.+||+|||++.....  .........|+..|++||      ++.++|+||||+++|+|++|..||.....    
T Consensus       133 ll~~~~~~kL~Dfg~~~~~~~--~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~  210 (324)
T cd05589         133 LLDTEGFVKIADFGLCKEGMG--FGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVF  210 (324)
T ss_pred             EECCCCcEEeCcccCCccCCC--CCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            999999999999998764321  112233467889999999      57789999999999999999999864321    


Q ss_pred             -------CCcCHHHHHHHHHHHHHccCcCCCCCC-----CHHHHHH
Q 039565          142 -------GEFDIISVEKAVEIAMASVSSKVNRRP-----LMNQVVM  175 (188)
Q Consensus       142 -------~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~i~~  175 (188)
                             ...+...+..+.+++.+||+.+|.+||     ++.++++
T Consensus       211 ~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~  256 (324)
T cd05589         211 DSIVNDEVRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK  256 (324)
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence                   112333466788999999999999999     5666665

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=4e-33  Score=218.66  Aligned_cols=166  Identities=20%  Similarity=0.266  Sum_probs=135.6

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||+++.+.   .+..++||||+++|+|..++ ....           |++.||+|||+   .+++||||||+|
T Consensus        49 l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~N  125 (328)
T cd05593          49 LKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHS---GKIVYRDLKLEN  125 (328)
T ss_pred             HHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHH
Confidence            467899999999887   78899999999999999888 2221           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCC--
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKG--  142 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~--  142 (188)
                      |+++.++.+||+|||+++....  .........|+..|++||      ++.++|+|||||++|++++|..||......  
T Consensus       126 Ill~~~~~~kL~DfG~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~  203 (328)
T cd05593         126 LMLDKDGHIKITDFGLCKEGIT--DAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL  203 (328)
T ss_pred             eEECCCCcEEEecCcCCccCCC--cccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHH
Confidence            9999999999999999864221  111223456889999999      578899999999999999999998543211  


Q ss_pred             ---------CcCHHHHHHHHHHHHHccCcCCCCCC-----CHHHHHHH
Q 039565          143 ---------EFDIISVEKAVEIAMASVSSKVNRRP-----LMNQVVMV  176 (188)
Q Consensus       143 ---------~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~i~~~  176 (188)
                               .++...+..+.+++..||+.+|++||     ++.++++.
T Consensus       204 ~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  251 (328)
T cd05593         204 FELILMEDIKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH  251 (328)
T ss_pred             HHHhccCCccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence                     12333456789999999999999997     88888763

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=8.2e-33  Score=212.57  Aligned_cols=166  Identities=19%  Similarity=0.154  Sum_probs=132.4

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc-c-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE-E-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~-~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||+++++.   .+..++||||++++.+..+.... .           |++.||.|||+   .+++|+||||+|
T Consensus        54 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~N  130 (287)
T cd07848          54 LRTLKQENIVELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHK---NDIVHRDIKPEN  130 (287)
T ss_pred             HHhCCCccccchhhhEecCCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHH
Confidence            567899999999988   78899999999987776655221 1           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCC--
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKG--  142 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~--  142 (188)
                      |+++.++.+||+|||++..... ..........|+..|++||      ++.++|+|||||++|++++|..||......  
T Consensus       131 ill~~~~~~kl~Dfg~~~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~  209 (287)
T cd07848         131 LLISHNDVLKLCDFGFARNLSE-GSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQ  209 (287)
T ss_pred             EEEcCCCcEEEeeccCcccccc-cccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHH
Confidence            9999999999999999875431 1111223456788899998      578899999999999999999988532110  


Q ss_pred             ---------Cc--------------------------------CHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          143 ---------EF--------------------------------DIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       143 ---------~~--------------------------------~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                               ..                                ....+..+.+++.+||+.+|++|||++++++
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~  283 (287)
T cd07848         210 LFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN  283 (287)
T ss_pred             HHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence                     00                                0013456889999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=2.4e-32  Score=207.22  Aligned_cols=174  Identities=22%  Similarity=0.257  Sum_probs=135.5

Q ss_pred             cccccCCCeeeeccc----CCccEEEEecCCCCChhhhcCC-cc------------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK----QKNNALELGFRGNPELVDQQGK-EE------------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~----~~~~~lv~e~~~~~~L~~~~~~-~~------------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      ++.++||||+++++.    +...++++||+.+++|.+++.+ ..            |++.||.|||+   .+++|+|++|
T Consensus        50 l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlk~  126 (262)
T cd05058          50 MKDFSHPNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLAS---KKFVHRDLAA  126 (262)
T ss_pred             HccCCCCCcceEEEEeecCCCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccCc
Confidence            467899999999996    4457899999999999999822 21            89999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCC--cceeeecccccccCCC------CCCccchHHHHHHHHHHHhC-Ccccccc
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGT--HMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITG-ILTVDLS  139 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g-~~p~~~~  139 (188)
                      +||+++.++.++++|||++.........  .......++..|++||      ++.++|+||||+++|++++| ..||...
T Consensus       127 ~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~  206 (262)
T cd05058         127 RNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV  206 (262)
T ss_pred             ceEEEcCCCcEEECCccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence            9999999999999999988743211110  0111233455788888      47789999999999999995 4555421


Q ss_pred             CC------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          140 FK------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       140 ~~------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                      ..            ...+...+..+.+++..||+.+|++||++.++++.|+++..
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~  261 (262)
T cd05058         207 DSFDITVYLLQGRRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS  261 (262)
T ss_pred             CHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence            11            11122345688999999999999999999999999988653

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=1.7e-32  Score=215.95  Aligned_cols=173  Identities=20%  Similarity=0.207  Sum_probs=137.8

Q ss_pred             ccc-cCCCeeeeccc----CCccEEEEecCCCCChhhhcCC-c-------------------------------------
Q 039565            7 NKL-TGPLLVELIGK----QKNNALELGFRGNPELVDQQGK-E-------------------------------------   43 (188)
Q Consensus         7 ~~l-~Hpniv~~~~~----~~~~~lv~e~~~~~~L~~~~~~-~-------------------------------------   43 (188)
                      .++ +||||+++++.    ....++++||+++++|.+++.. .                                     
T Consensus        65 ~~l~~h~niv~~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (337)
T cd05054          65 IHIGHHLNVVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSAS  144 (337)
T ss_pred             HhhccCcchhheeeeEecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccc
Confidence            455 79999999987    5678899999999999988711 0                                     


Q ss_pred             -----------------------------------ccHHHHHHHHhcCCCCCcEEeCCCCCcEEEccCCceEEecccCcc
Q 039565           44 -----------------------------------EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR   88 (188)
Q Consensus        44 -----------------------------------~~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~   88 (188)
                                                         .|++.||+|||+   .+++|||+||.||+++.++.++|+|||++.
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~~ivHrDikp~Nill~~~~~vkL~DfG~a~  221 (337)
T cd05054         145 SGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLAR  221 (337)
T ss_pred             cccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEeCCCcEEEeccccch
Confidence                                               189999999999   999999999999999999999999999987


Q ss_pred             cccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCCC-------------CcCHHH
Q 039565           89 ISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFKG-------------EFDIIS  148 (188)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~~-------------~~~~~~  148 (188)
                      ...............++..|++||      ++.++|+|||||++|++++ |..||......             ..+...
T Consensus       222 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (337)
T cd05054         222 DIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYA  301 (337)
T ss_pred             hcccCcchhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccC
Confidence            543222111122334556799999      5788999999999999997 88888542211             112234


Q ss_pred             HHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          149 VEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       149 ~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                      +..+.+++..||+.+|++||++++++++|+.+.+
T Consensus       302 ~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~  335 (337)
T cd05054         302 TPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ  335 (337)
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            5678999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=2.1e-32  Score=210.05  Aligned_cols=171  Identities=19%  Similarity=0.271  Sum_probs=136.9

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcC-Cc-------------------c---------cHHHHHHHH
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQG-KE-------------------E---------VCCPGLEYL   53 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~-~~-------------------~---------~i~~~l~~L   53 (188)
                      +.+++||||++++++   ....+++|||+++++|.+++. +.                   .         |++.||.||
T Consensus        61 l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~l  140 (283)
T cd05090          61 MAELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYL  140 (283)
T ss_pred             HhhCCCCCeeeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHH
Confidence            567899999999998   778899999999999999871 10                   0         899999999


Q ss_pred             hcCCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHH
Q 039565           54 HQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVIL  127 (188)
Q Consensus        54 h~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~  127 (188)
                      |+   .+++|+|+||+||+++.++.++++|||++................++..|++||      ++.++|+||||+++|
T Consensus       141 H~---~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~  217 (283)
T cd05090         141 SS---HFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLW  217 (283)
T ss_pred             Hh---cCeehhccccceEEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHH
Confidence            99   999999999999999999999999999987543222111222334456688888      478899999999999


Q ss_pred             HHHh-CCccccccCC------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhh
Q 039565          128 EIIT-GILTVDLSFK------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQ  179 (188)
Q Consensus       128 ~~~~-g~~p~~~~~~------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~  179 (188)
                      ++++ |..||.....            ...+...+..+.+++..||+.+|++||++.+|.+.|..
T Consensus       218 el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         218 EIFSFGLQPYYGFSNQEVIEMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             HHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence            9998 8888743211            11223456788999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=2e-32  Score=207.58  Aligned_cols=170  Identities=21%  Similarity=0.263  Sum_probs=137.9

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-cc-------------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-EE-------------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~~-------------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +..++||||++++++   ....+++|||+++++|.+++.. .+             |++.|+.|||+   .+++|+|++|
T Consensus        56 l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~h~dl~~  132 (261)
T cd05148          56 LKRLRHKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEE---QNSIHRDLAA  132 (261)
T ss_pred             HhcCCCcchhheeeeEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccCc
Confidence            567899999999988   7788999999999999999832 21             89999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCC
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFK  141 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~  141 (188)
                      +||+++.++.++++|||.+......  ........++..|++||      ++.++|+||||+++|++++ |..||.....
T Consensus       133 ~nilv~~~~~~kl~d~g~~~~~~~~--~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~  210 (261)
T cd05148         133 RNILVGEDLVCKVADFGLARLIKED--VYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN  210 (261)
T ss_pred             ceEEEcCCceEEEccccchhhcCCc--cccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCH
Confidence            9999999999999999988754211  11112233455688887      5778999999999999998 7888853221


Q ss_pred             ------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhc
Q 039565          142 ------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQG  180 (188)
Q Consensus       142 ------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~  180 (188)
                                  ...+...+..+.+++.+||+.+|.+|||++++++.|+.+
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~  261 (261)
T cd05148         211 HEVYDQITAGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI  261 (261)
T ss_pred             HHHHHHHHhCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence                        122334567899999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=2.3e-33  Score=220.11  Aligned_cols=162  Identities=24%  Similarity=0.312  Sum_probs=134.7

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc-c-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE-E-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~-~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||+++++.   .+..+++|||+.+++|.+++.+. .           |++.||.|||+   .+++||||||+|
T Consensus        72 l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~N  148 (329)
T PTZ00263         72 LMELSHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHS---KDIIYRDLKPEN  148 (329)
T ss_pred             HHhCCCCCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHH
Confidence            567899999999988   78899999999999999998222 1           89999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC---
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK---  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~---  141 (188)
                      |+++.++.+||+|||++.....     ......|++.|+|||      ++.++|+|||||++|+|++|..||.....   
T Consensus       149 Ill~~~~~~kl~Dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~  223 (329)
T PTZ00263        149 LLLDNKGHVKVTDFGFAKKVPD-----RTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRI  223 (329)
T ss_pred             EEECCCCCEEEeeccCceEcCC-----CcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHH
Confidence            9999999999999999875421     122457888999999      57889999999999999999999854321   


Q ss_pred             --------CCcCHHHHHHHHHHHHHccCcCCCCCCC-----HHHHHH
Q 039565          142 --------GEFDIISVEKAVEIAMASVSSKVNRRPL-----MNQVVM  175 (188)
Q Consensus       142 --------~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~i~~  175 (188)
                              ...+...+..+.+++..||+.||.+||+     +++++.
T Consensus       224 ~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~  270 (329)
T PTZ00263        224 YEKILAGRLKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN  270 (329)
T ss_pred             HHHHhcCCcCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence                    1122334567889999999999999996     677764

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.98  E-value=1.5e-32  Score=209.33  Aligned_cols=169  Identities=20%  Similarity=0.214  Sum_probs=131.8

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcC-Cc-------c---------cHHHHHHHHhcCCCCCcEEeC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQG-KE-------E---------VCCPGLEYLHQGLKHPIIQRD   65 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~-~~-------~---------~i~~~l~~Lh~~~~~~i~h~d   65 (188)
                      +.+++||||+++++.   ....+++|||+++|+|.+++. ..       .         |++.|+.|||+   .+++|+|
T Consensus        49 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~d  125 (269)
T cd05087          49 YRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHK---NNFIHSD  125 (269)
T ss_pred             HHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH---CCEeccc
Confidence            467899999999998   677899999999999999882 11       0         89999999999   9999999


Q ss_pred             CCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCCC-------------CCccchHHHHHHHHHHHh-
Q 039565           66 MKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTEL-------------TEKSDVDSFEIVILEIIT-  131 (188)
Q Consensus        66 l~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~-------------~~~~di~s~G~~l~~~~~-  131 (188)
                      +||.||+++.++.++++|||.+................++..|++||.             +.++|+||||+++|++++ 
T Consensus       126 lkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~  205 (269)
T cd05087         126 LALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFEL  205 (269)
T ss_pred             cCcceEEEcCCCcEEECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhC
Confidence            999999999999999999998864321111111223445667899982             568999999999999996 


Q ss_pred             CCccccccCCC-----------------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHh
Q 039565          132 GILTVDLSFKG-----------------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVRE  178 (188)
Q Consensus       132 g~~p~~~~~~~-----------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~  178 (188)
                      |..||......                 .........+.+++..|| .+|++|||+++|++.|+
T Consensus       206 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         206 GSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             CCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence            98888532111                 111123456788999999 58999999999998875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.98  E-value=1.8e-32  Score=208.82  Aligned_cols=169  Identities=20%  Similarity=0.209  Sum_probs=130.3

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc----------------cHHHHHHHHhcCCCCCcEEeC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE----------------VCCPGLEYLHQGLKHPIIQRD   65 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~----------------~i~~~l~~Lh~~~~~~i~h~d   65 (188)
                      ++.++||||+++++.   ....+++|||+++|+|.+++ ....                |++.|++|||+   .+++|||
T Consensus        49 ~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~d  125 (269)
T cd05042          49 YRELNHPNVLQCLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ---ADFIHSD  125 (269)
T ss_pred             HHhCCCCCcceEEEEECCCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHh---cCEeccc
Confidence            456789999999988   77899999999999999998 2110                89999999999   9999999


Q ss_pred             CCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------------CCCccchHHHHHHHHHHHh-
Q 039565           66 MKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------------LTEKSDVDSFEIVILEIIT-  131 (188)
Q Consensus        66 l~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------------~~~~~di~s~G~~l~~~~~-  131 (188)
                      +||+||+++.++.+|++|||++................++..|++||             .+.++|+||||+++|++++ 
T Consensus       126 lkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~  205 (269)
T cd05042         126 LALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTA  205 (269)
T ss_pred             ccHhheEecCCCcEEEeccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhC
Confidence            99999999999999999999886432111111112223445688887             2568999999999999998 


Q ss_pred             CCccccccCC-----------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHh
Q 039565          132 GILTVDLSFK-----------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVRE  178 (188)
Q Consensus       132 g~~p~~~~~~-----------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~  178 (188)
                      |..||.....                 ...+...+..+.+++..|| .+|++|||+++|++.|.
T Consensus       206 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         206 ADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT  268 (269)
T ss_pred             CCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence            6777743211                 1122244566778889998 49999999999999873

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.98  E-value=2.7e-32  Score=211.60  Aligned_cols=174  Identities=20%  Similarity=0.204  Sum_probs=137.9

Q ss_pred             cccc-cCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc---------------------------ccHHHHHHHH
Q 039565            6 RNKL-TGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE---------------------------EVCCPGLEYL   53 (188)
Q Consensus         6 l~~l-~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~---------------------------~~i~~~l~~L   53 (188)
                      +..+ +||||+++++.   ....+++|||+.+++|.+++ .+.                           .|++.||.||
T Consensus        74 l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~L  153 (304)
T cd05101          74 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYL  153 (304)
T ss_pred             HHhhccCCCchheeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHH
Confidence            3456 79999999998   77889999999999999998 221                           0899999999


Q ss_pred             hcCCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHH
Q 039565           54 HQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVIL  127 (188)
Q Consensus        54 h~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~  127 (188)
                      |+   .+++|+|+||+||+++.++.++++|||+++...............++..|++||      ++.++|+||||+++|
T Consensus       154 H~---~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~  230 (304)
T cd05101         154 AS---QKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMW  230 (304)
T ss_pred             HH---CCeeecccccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHH
Confidence            99   999999999999999999999999999987543222211222233456789998      577899999999999


Q ss_pred             HHHh-CCccccccCC------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          128 EIIT-GILTVDLSFK------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       128 ~~~~-g~~p~~~~~~------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                      ++++ |..||.....            ...+...+..+.+++..||+.+|.+|||+.++++.|+++..
T Consensus       231 el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~  298 (304)
T cd05101         231 EIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT  298 (304)
T ss_pred             HHHcCCCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHH
Confidence            9998 6677643211            11223345788999999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.98  E-value=2.7e-32  Score=210.75  Aligned_cols=171  Identities=20%  Similarity=0.289  Sum_probs=135.0

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc--------------c---------cHHHHHHHHhcCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE--------------E---------VCCPGLEYLHQGLK   58 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~--------------~---------~i~~~l~~Lh~~~~   58 (188)
                      +++++|||+++++++   ....+++|||+++++|.+++ ...              .         |++.||.|||+   
T Consensus        71 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---  147 (295)
T cd05097          71 MSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLAS---  147 (295)
T ss_pred             HHhCCCCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHh---
Confidence            577999999999998   78899999999999999988 211              1         89999999999   


Q ss_pred             CCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-
Q 039565           59 HPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-  131 (188)
Q Consensus        59 ~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-  131 (188)
                      .+++|+|+||+||+++.++.+|++|||++................++..|++||      ++.++|+||||+++|++++ 
T Consensus       148 ~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~  227 (295)
T cd05097         148 LNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTL  227 (295)
T ss_pred             cCeeccccChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHc
Confidence            999999999999999999999999999887542111111112233456788888      4789999999999999988 


Q ss_pred             -CCccccccCCC-------------------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhh
Q 039565          132 -GILTVDLSFKG-------------------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQ  179 (188)
Q Consensus       132 -g~~p~~~~~~~-------------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~  179 (188)
                       +..||......                   ..+...+..+.+++..||+.+|++|||+++|++.|++
T Consensus       228 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~  295 (295)
T cd05097         228 CKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE  295 (295)
T ss_pred             CCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence             44566432110                   1122235679999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.98  E-value=2.1e-32  Score=210.90  Aligned_cols=172  Identities=22%  Similarity=0.220  Sum_probs=136.6

Q ss_pred             ccc-cCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-c--------------c-------------cHHHHHHHHh
Q 039565            7 NKL-TGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-E--------------E-------------VCCPGLEYLH   54 (188)
Q Consensus         7 ~~l-~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~--------------~-------------~i~~~l~~Lh   54 (188)
                      .++ +||||+++++.   ....+++|||+++|+|..++.. .              .             |++.||+|||
T Consensus        70 ~~l~~h~~i~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH  149 (293)
T cd05053          70 KMIGKHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLA  149 (293)
T ss_pred             HhhcCCCCeeeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH
Confidence            355 79999999998   7788999999999999999821 1              0             8999999999


Q ss_pred             cCCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHH
Q 039565           55 QGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILE  128 (188)
Q Consensus        55 ~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~  128 (188)
                      +   .+++|+|+||.||+++.++.++++|||.+................++..|++||      ++.++|+||||+++|+
T Consensus       150 ~---~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  226 (293)
T cd05053         150 S---KKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWE  226 (293)
T ss_pred             H---CCccccccceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHH
Confidence            9   999999999999999999999999999987543211111111223445688998      5778999999999999


Q ss_pred             HHh-CCccccccCC------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhcc
Q 039565          129 IIT-GILTVDLSFK------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGS  181 (188)
Q Consensus       129 ~~~-g~~p~~~~~~------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~  181 (188)
                      +++ |..||.....            .+.+...+..+.+++..|+..+|++|||+.++++.|+.+.
T Consensus       227 l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~  292 (293)
T cd05053         227 IFTLGGSPYPGIPVEELFKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML  292 (293)
T ss_pred             HhcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence            997 8777743211            1223344568899999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.98  E-value=2.5e-32  Score=209.51  Aligned_cols=171  Identities=18%  Similarity=0.262  Sum_probs=136.0

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcC-C------------------cc---------cHHHHHHHHh
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQG-K------------------EE---------VCCPGLEYLH   54 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~-~------------------~~---------~i~~~l~~Lh   54 (188)
                      +.+++||||++++++   ....++++||+++++|..++. .                  ..         |++.||.|||
T Consensus        62 ~~~l~h~~iv~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH  141 (283)
T cd05091          62 RSRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLS  141 (283)
T ss_pred             HhcCCCCCcCeEEEEEcCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH
Confidence            356889999999998   678899999999999999872 1                  01         8999999999


Q ss_pred             cCCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHH
Q 039565           55 QGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILE  128 (188)
Q Consensus        55 ~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~  128 (188)
                      +   .+++|||+||.||+++.++.+|++|||+++...............++..|++||      ++.++|+||||+++|+
T Consensus       142 ~---~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~e  218 (283)
T cd05091         142 S---HHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWE  218 (283)
T ss_pred             H---cCccccccchhheEecCCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHH
Confidence            9   999999999999999999999999999887543221111122234456799998      5778999999999999


Q ss_pred             HHh-CCccccccCC------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhh
Q 039565          129 IIT-GILTVDLSFK------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQ  179 (188)
Q Consensus       129 ~~~-g~~p~~~~~~------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~  179 (188)
                      +++ |..||.....            ...+...+..+.+++..||+.+|.+||++.+|++.|+.
T Consensus       219 l~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         219 VFSYGLQPYCGYSNQDVIEMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             HHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence            998 7777643211            11233456678999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.98  E-value=3.4e-32  Score=211.07  Aligned_cols=172  Identities=20%  Similarity=0.218  Sum_probs=137.3

Q ss_pred             cccc-cCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc----c---------cHHHHHHHHhcCCCCCcEEeCCC
Q 039565            6 RNKL-TGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE----E---------VCCPGLEYLHQGLKHPIIQRDMK   67 (188)
Q Consensus         6 l~~l-~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~----~---------~i~~~l~~Lh~~~~~~i~h~dl~   67 (188)
                      +.++ +||||+++++.   .+..++++||+++++|.+++ ...    .         |++.||.|||+   .+++|+|++
T Consensus        92 l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlk  168 (302)
T cd05055          92 MSHLGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLAS---KNCIHRDLA  168 (302)
T ss_pred             HHhccCCCCcceEEEEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeehhhhc
Confidence            3466 79999999988   77899999999999999998 321    1         89999999999   999999999


Q ss_pred             CCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccC
Q 039565           68 STNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSF  140 (188)
Q Consensus        68 ~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~  140 (188)
                      |+||+++.++.++++|||++................++..|++||      ++.++|+||||+++|++++ |..||....
T Consensus       169 p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~  248 (302)
T cd05055         169 ARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMP  248 (302)
T ss_pred             cceEEEcCCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCC
Confidence            999999999999999999987543221111112234556799999      4778999999999999998 888874322


Q ss_pred             C-------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhc
Q 039565          141 K-------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQG  180 (188)
Q Consensus       141 ~-------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~  180 (188)
                      .             ...+...+..+.+++..|++.+|++|||+.++++.|++.
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         249 VDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             chHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence            1             111223456889999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.98  E-value=2e-32  Score=207.59  Aligned_cols=164  Identities=15%  Similarity=0.132  Sum_probs=130.8

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +..++||||+++++.   +...++||||+++|+|..++ .+..            |++.||+|||+   .+++|||+||+
T Consensus        53 l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dlkp~  129 (258)
T cd05078          53 MSQLSHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLED---KGLTHGNVCAK  129 (258)
T ss_pred             HHhCCCCChhheeeEEEeCCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccc
Confidence            456889999999999   68899999999999999999 3221            99999999999   99999999999


Q ss_pred             cEEEccCCc--------eEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCC-
Q 039565           70 NILLNEKVQ--------AKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGI-  133 (188)
Q Consensus        70 nill~~~~~--------~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~-  133 (188)
                      ||+++.++.        ++++|||++....      ......++..|++||       ++.++|+||||+++|++++|. 
T Consensus       130 nili~~~~~~~~~~~~~~~l~d~g~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~  203 (258)
T cd05078         130 NVLLIREEDRKTGNPPFIKLSDPGISITVL------PKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGD  203 (258)
T ss_pred             eEEEecccccccCCCceEEecccccccccC------CchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCC
Confidence            999987654        6899999876432      112245667789998       366799999999999999985 


Q ss_pred             ccccccCC----------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHh
Q 039565          134 LTVDLSFK----------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVRE  178 (188)
Q Consensus       134 ~p~~~~~~----------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~  178 (188)
                      .|+.....          ...+.....++.+++..||+.+|++|||+++|++.|+
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~  258 (258)
T cd05078         204 KPLSALDSQKKLQFYEDRHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             CChhhccHHHHHHHHHccccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            55533211          1122233467899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.98  E-value=6.7e-32  Score=204.87  Aligned_cols=170  Identities=24%  Similarity=0.282  Sum_probs=137.1

Q ss_pred             cccccCCCeeeeccc--CCccEEEEecCCCCChhhhc-CCcc-------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQ-GKEE-------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~-~~~~-------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +++++|||+++++++  ....+++|||+++++|.+++ ....             |++.||.|||+   .+++|+|++|.
T Consensus        55 l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dl~~~  131 (260)
T cd05069          55 MKKLRHDKLVPLYAVVSEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIER---MNYIHRDLRAA  131 (260)
T ss_pred             HHhCCCCCeeeEEEEEcCCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcc
Confidence            567899999999988  67789999999999999998 2221             99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCC-
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFK-  141 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~-  141 (188)
                      ||++++++.++++|||.+....... ........++..|++||      .+.++|+||||+++|++++ |..||..... 
T Consensus       132 Nill~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~  210 (260)
T cd05069         132 NILVGDNLVCKIADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR  210 (260)
T ss_pred             eEEEcCCCeEEECCCccceEccCCc-ccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence            9999999999999999987542111 11111223456688888      4678999999999999998 8888854221 


Q ss_pred             -----------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhh
Q 039565          142 -----------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQ  179 (188)
Q Consensus       142 -----------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~  179 (188)
                                 ...+...+..+.+++.+||..+|++||+++++++.|+.
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         211 EVLEQVERGYRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             HHHHHHHcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence                       12233456789999999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.98  E-value=1.6e-32  Score=215.63  Aligned_cols=164  Identities=22%  Similarity=0.328  Sum_probs=132.6

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++   .+..+++|||+++++|.+++.+..            |++.||.|||+.  .+++|+||||+|
T Consensus        57 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~--~~ivH~dlkp~N  134 (333)
T cd06650          57 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSN  134 (333)
T ss_pred             HHHCCCCcccceeEEEEECCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChhh
Confidence            567899999999998   788999999999999999983221            899999999971  479999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCCCc
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKGEF  144 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~~~  144 (188)
                      |+++.++.+|++|||++.....    .......|+..|++||      ++.++|+|||||++|++++|..||+.......
T Consensus       135 ili~~~~~~kL~Dfg~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~  210 (333)
T cd06650         135 ILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKEL  210 (333)
T ss_pred             EEEcCCCCEEEeeCCcchhhhh----hccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHH
Confidence            9999999999999998864321    1122346788899999      57789999999999999999988853211000


Q ss_pred             ---------------------------------------------------------CHHHHHHHHHHHHHccCcCCCCC
Q 039565          145 ---------------------------------------------------------DIISVEKAVEIAMASVSSKVNRR  167 (188)
Q Consensus       145 ---------------------------------------------------------~~~~~~~~~~l~~~cl~~~p~~R  167 (188)
                                                                               ....+..+.+++.+||+.+|++|
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R  290 (333)
T cd06650         211 ELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAER  290 (333)
T ss_pred             HHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccC
Confidence                                                                     00123467899999999999999


Q ss_pred             CCHHHHHH
Q 039565          168 PLMNQVVM  175 (188)
Q Consensus       168 ps~~~i~~  175 (188)
                      ||++++++
T Consensus       291 pt~~ell~  298 (333)
T cd06650         291 ADLKQLMV  298 (333)
T ss_pred             cCHHHHhh
Confidence            99999976

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.98  E-value=3.9e-32  Score=209.93  Aligned_cols=171  Identities=18%  Similarity=0.251  Sum_probs=134.4

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc----------------------ccHHHHHHHHhcCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE----------------------EVCCPGLEYLHQGLKH   59 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~----------------------~~i~~~l~~Lh~~~~~   59 (188)
                      +.+++||||++++++   .+..++++||+++++|.+++ ...                      .|++.|++|||+   .
T Consensus        73 l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~  149 (296)
T cd05095          73 MSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSS---L  149 (296)
T ss_pred             HHhCCCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHH---C
Confidence            567899999999998   77889999999999999998 211                      089999999999   9


Q ss_pred             CcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh--
Q 039565           60 PIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT--  131 (188)
Q Consensus        60 ~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~--  131 (188)
                      +++|+|+||+||+++.++.++++|||++................++..|++||      ++.++|+||||+++|++++  
T Consensus       150 ~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~  229 (296)
T cd05095         150 NFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLC  229 (296)
T ss_pred             CeecccCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhC
Confidence            99999999999999999999999999987542111111111223345677876      5789999999999999998  


Q ss_pred             CCccccccCCC-------------------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhh
Q 039565          132 GILTVDLSFKG-------------------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQ  179 (188)
Q Consensus       132 g~~p~~~~~~~-------------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~  179 (188)
                      |..||......                   +.+...+..+.+++.+||+.+|++||++++|++.|++
T Consensus       230 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  296 (296)
T cd05095         230 KEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE  296 (296)
T ss_pred             CCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence            55676432110                   1122345788899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.98  E-value=3.1e-32  Score=209.70  Aligned_cols=175  Identities=17%  Similarity=0.187  Sum_probs=138.3

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-c---------c------------cHHHHHHHHhcCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-E---------E------------VCCPGLEYLHQGLKHP   60 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~---------~------------~i~~~l~~Lh~~~~~~   60 (188)
                      +.+++||||++++++   +...+++|||+++|+|.+++.+ .         .            |++.||.|||+   .+
T Consensus        63 l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~  139 (288)
T cd05061          63 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KK  139 (288)
T ss_pred             HHhCCCCCeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CC
Confidence            567899999999998   7788999999999999999921 0         0            89999999999   99


Q ss_pred             cEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CC
Q 039565           61 IIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GI  133 (188)
Q Consensus        61 i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~  133 (188)
                      ++|+|+||+||+++.++.++++|||+++...............++..|++||      ++.++|+||||+++|++++ |.
T Consensus       140 i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~  219 (288)
T cd05061         140 FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAE  219 (288)
T ss_pred             CcCCCCChheEEEcCCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCC
Confidence            9999999999999999999999999887532211111112223455688888      4788999999999999998 67


Q ss_pred             ccccccCC------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          134 LTVDLSFK------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       134 ~p~~~~~~------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                      .||.....            ...+...+..+.+++.+|++.+|++|||+.++++.|+.....
T Consensus       220 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~  281 (288)
T cd05061         220 QPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHP  281 (288)
T ss_pred             CCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCC
Confidence            77753221            112223457899999999999999999999999999875443

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.98  E-value=3.4e-32  Score=208.37  Aligned_cols=171  Identities=22%  Similarity=0.218  Sum_probs=133.9

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc---------c---------cHHHHHHHHhcCCCCCcEE
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE---------E---------VCCPGLEYLHQGLKHPIIQ   63 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~---------~---------~i~~~l~~Lh~~~~~~i~h   63 (188)
                      +.+++||||++++++   ....++++||+++++|.+++ ...         .         |++.||.|||+   .+++|
T Consensus        63 l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH  139 (277)
T cd05036          63 MSKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEE---NHFIH  139 (277)
T ss_pred             HHhCCCCCEeeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEee
Confidence            567899999999997   67789999999999999998 211         1         89999999999   89999


Q ss_pred             eCCCCCcEEEccCC---ceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CC
Q 039565           64 RDMKSTNILLNEKV---QAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GI  133 (188)
Q Consensus        64 ~dl~~~nill~~~~---~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~  133 (188)
                      +|++|+||+++.++   .++++|||.++................+..|++||      ++.++|+|||||++|++++ |.
T Consensus       140 ~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~  219 (277)
T cd05036         140 RDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGY  219 (277)
T ss_pred             cccchheEEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCC
Confidence            99999999998754   58999999987542111111111222335688888      6889999999999999996 88


Q ss_pred             ccccccCC------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhh
Q 039565          134 LTVDLSFK------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQ  179 (188)
Q Consensus       134 ~p~~~~~~------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~  179 (188)
                      .||+....            .+.+...+..+.+++.+|++.+|++|||+.++++.|++
T Consensus       220 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~  277 (277)
T cd05036         220 MPYPGRTNQEVMEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY  277 (277)
T ss_pred             CCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence            88864321            12233445688999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.98  E-value=3.2e-33  Score=227.54  Aligned_cols=164  Identities=22%  Similarity=0.285  Sum_probs=145.1

Q ss_pred             ccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc--------------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            7 NKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE--------------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         7 ~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~--------------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      ++++|+|||+.+|.   +...-+.||-.+||+|.+.+ .+++              |+++||.|||+   ..|+|||+|-
T Consensus       627 ~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHe---n~IVHRDIKG  703 (1226)
T KOG4279|consen  627 STLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHE---NKIVHRDIKG  703 (1226)
T ss_pred             HHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhh---cceeeccccC
Confidence            46899999999999   66677899999999999999 5554              99999999999   9999999999


Q ss_pred             CcEEEcc-CCceEEecccCcccccCCCCCcceeeecccccccCCC--------CCCccchHHHHHHHHHHHhCCccccc-
Q 039565           69 TNILLNE-KVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE--------LTEKSDVDSFEIVILEIITGILTVDL-  138 (188)
Q Consensus        69 ~nill~~-~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe--------~~~~~di~s~G~~l~~~~~g~~p~~~-  138 (188)
                      +|++++. .|.+||+|||-+++.  .+-.....+++||..|||||        ++.++|||||||++.||.||++||-+ 
T Consensus       704 DNVLvNTySGvlKISDFGTsKRL--AginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~El  781 (1226)
T KOG4279|consen  704 DNVLVNTYSGVLKISDFGTSKRL--AGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVEL  781 (1226)
T ss_pred             CcEEEeeccceEEecccccchhh--ccCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeec
Confidence            9999975 689999999988864  34445677899999999999        78999999999999999999999843 


Q ss_pred             -------------cCCCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          139 -------------SFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       139 -------------~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                   ...++.+...+.+...++..|...+|..||++.++++
T Consensus       782 gspqAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~  831 (1226)
T KOG4279|consen  782 GSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ  831 (1226)
T ss_pred             CChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence                         1235678889999999999999999999999999986

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.98  E-value=3.2e-32  Score=208.47  Aligned_cols=164  Identities=19%  Similarity=0.191  Sum_probs=129.6

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-cc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-EE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +++++||||++++++   ....++||||+++|+|..++.+ .+            |++.||+|||+   .+++||||||+
T Consensus        70 ~~~l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~  146 (274)
T cd05076          70 MSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLED---KNLVHGNVCAK  146 (274)
T ss_pred             HhcCCCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHc---CCccCCCCCcc
Confidence            467899999999999   7788999999999999999822 21            99999999999   99999999999


Q ss_pred             cEEEccCC-------ceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHH-hCCc
Q 039565           70 NILLNEKV-------QAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEII-TGIL  134 (188)
Q Consensus        70 nill~~~~-------~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~-~g~~  134 (188)
                      ||+++..+       .++++|||.+......      ....++..|++||       ++.++|+||||+++|+++ +|..
T Consensus       147 Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~  220 (274)
T cd05076         147 NILLARLGLAEGTSPFIKLSDPGVSFTALSR------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEV  220 (274)
T ss_pred             cEEEeccCcccCccceeeecCCccccccccc------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence            99997643       3799999987543211      1123556688888       467899999999999985 7888


Q ss_pred             cccccCCCC----------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHh
Q 039565          135 TVDLSFKGE----------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVRE  178 (188)
Q Consensus       135 p~~~~~~~~----------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~  178 (188)
                      ||......+          .+......+.+++..||+.+|++|||+.+|++.|.
T Consensus       221 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~  274 (274)
T cd05076         221 PLKERTPSEKERFYEKKHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRDLT  274 (274)
T ss_pred             CccccChHHHHHHHHhccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence            886432211          12222357899999999999999999999998873

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.98  E-value=2.7e-32  Score=209.25  Aligned_cols=171  Identities=18%  Similarity=0.196  Sum_probs=136.5

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc-----------------c---------cHHHHHHHHhc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE-----------------E---------VCCPGLEYLHQ   55 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~-----------------~---------~i~~~l~~Lh~   55 (188)
                      +.+++||||+++++.   ....++++||+++++|.+++ ...                 .         |++.|++|||+
T Consensus        61 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~  140 (280)
T cd05092          61 LTVLQHQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLAS  140 (280)
T ss_pred             HhcCCCCCCceEEEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHH
Confidence            567899999999988   67789999999999999988 211                 1         89999999999


Q ss_pred             CCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHH
Q 039565           56 GLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEI  129 (188)
Q Consensus        56 ~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~  129 (188)
                         .+++|+|+||+||++++++.++++|||++................++..|++||      ++.++|+||||+++|++
T Consensus       141 ---~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el  217 (280)
T cd05092         141 ---LHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEI  217 (280)
T ss_pred             ---CCeecccccHhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHH
Confidence               999999999999999999999999999886442111111112223456789998      57889999999999999


Q ss_pred             Hh-CCccccccC------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhh
Q 039565          130 IT-GILTVDLSF------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQ  179 (188)
Q Consensus       130 ~~-g~~p~~~~~------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~  179 (188)
                      ++ |..||....            ....+...+..+.+++.+||+.+|++||++++|++.|+.
T Consensus       218 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~  280 (280)
T cd05092         218 FTYGKQPWYQLSNTEAIECITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA  280 (280)
T ss_pred             HcCCCCCCccCCHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence            98 888874321            112233456789999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.98  E-value=3.2e-32  Score=207.07  Aligned_cols=171  Identities=19%  Similarity=0.259  Sum_probs=139.0

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcC----Ccc------------cHHHHHHHHhcCCCCCcEEeCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQG----KEE------------VCCPGLEYLHQGLKHPIIQRDM   66 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~----~~~------------~i~~~l~~Lh~~~~~~i~h~dl   66 (188)
                      +++++||||+++++.   .+..++++||+++++|.+++.    ...            |++.||+|||+   .+++|+|+
T Consensus        56 l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl  132 (267)
T cd08228          56 LKQLNHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHS---RRVMHRDI  132 (267)
T ss_pred             HHhCCCcceeeeeeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCC
Confidence            467899999999988   778899999999999998772    111            89999999999   99999999


Q ss_pred             CCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           67 KSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        67 ~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      +|+||+++.++.++++|||.+......  ........++..|++||      .+.++|+||||+++|++++|..||....
T Consensus       133 ~~~nil~~~~~~~~l~d~g~~~~~~~~--~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~  210 (267)
T cd08228         133 KPANVFITATGVVKLGDLGLGRFFSSK--TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK  210 (267)
T ss_pred             CHHHEEEcCCCCEEECccccceeccch--hHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccc
Confidence            999999999999999999988754311  11122345777899998      4678999999999999999998874321


Q ss_pred             C---------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhcc
Q 039565          141 K---------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGS  181 (188)
Q Consensus       141 ~---------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~  181 (188)
                      .               .......+..+.+++.+||..+|++||++.++++.+++++
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~  266 (267)
T cd08228         211 MNLFSLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH  266 (267)
T ss_pred             ccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence            1               1112345578999999999999999999999999998864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.98  E-value=6.6e-32  Score=205.31  Aligned_cols=171  Identities=22%  Similarity=0.246  Sum_probs=138.1

Q ss_pred             cccccCCCeeeeccc--CCccEEEEecCCCCChhhhcCC-c----c---------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQGK-E----E---------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~~~-~----~---------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||+++++.  ....+++|||+++++|.+++.+ .    .         |++.||+|||+   .+++|+|++|.
T Consensus        55 l~~l~~~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~  131 (262)
T cd05071          55 MKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAA  131 (262)
T ss_pred             HHhCCCCCcceEEEEECCCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcc
Confidence            467899999999987  6678999999999999999832 1    1         99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCC-
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFK-  141 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~-  141 (188)
                      ||+++.++.++++|||.+....... ........++..|++||      ++.++|+||||+++|++++ |..||..... 
T Consensus       132 Nill~~~~~~~L~dfg~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~  210 (262)
T cd05071         132 NILVGENLVCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR  210 (262)
T ss_pred             cEEEcCCCcEEeccCCceeeccccc-cccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH
Confidence            9999999999999999887543111 11111233455688998      4778999999999999999 7788754321 


Q ss_pred             -----------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhc
Q 039565          142 -----------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQG  180 (188)
Q Consensus       142 -----------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~  180 (188)
                                 ...+...+..+.+++..|++.+|++||++.++++.|+..
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~  260 (262)
T cd05071         211 EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  260 (262)
T ss_pred             HHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence                       122334567899999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.98  E-value=5.3e-33  Score=219.04  Aligned_cols=163  Identities=23%  Similarity=0.265  Sum_probs=136.2

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-cc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-EE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +..++||||++++++   ....+++|||+.+|+|.+++.. ..           |++.||.|||+   .+++||||||+|
T Consensus        85 l~~l~hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~N  161 (340)
T PTZ00426         85 LNYINHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQS---LNIVYRDLKPEN  161 (340)
T ss_pred             HHhCCCCCCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHH
Confidence            467899999999998   7788999999999999999922 22           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC---
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK---  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~---  141 (188)
                      |+++.++.++|+|||++.....     ......|++.|+|||      ++.++|+|||||++|+|++|..||.....   
T Consensus       162 ILl~~~~~ikL~DFG~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~  236 (340)
T PTZ00426        162 LLLDKDGFIKMTDFGFAKVVDT-----RTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLI  236 (340)
T ss_pred             EEECCCCCEEEecCCCCeecCC-----CcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHH
Confidence            9999999999999999875421     123457889999999      57889999999999999999999864321   


Q ss_pred             --------CCcCHHHHHHHHHHHHHccCcCCCCCC-----CHHHHHHH
Q 039565          142 --------GEFDIISVEKAVEIAMASVSSKVNRRP-----LMNQVVMV  176 (188)
Q Consensus       142 --------~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~i~~~  176 (188)
                              ...+...+..+.+++..|++.+|++|+     +++++++.
T Consensus       237 ~~~i~~~~~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h  284 (340)
T PTZ00426        237 YQKILEGIIYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH  284 (340)
T ss_pred             HHHHhcCCCCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence                    112334456788999999999999995     88888763

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.98  E-value=4.4e-32  Score=206.88  Aligned_cols=169  Identities=16%  Similarity=0.204  Sum_probs=130.5

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc----c------------cHHHHHHHHhcCCCCCcEEeCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE----E------------VCCPGLEYLHQGLKHPIIQRDM   66 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~----~------------~i~~~l~~Lh~~~~~~i~h~dl   66 (188)
                      +..++||||+++++.   ....+++|||+++|+|.+++.+.    .            |++.||.|||+   .+++|+|+
T Consensus        49 ~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~di  125 (268)
T cd05086          49 YRILQHPNILQCLGQCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHK---HNFLHSDL  125 (268)
T ss_pred             HhccCCcchhheEEEecCCCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH---CCeeccCC
Confidence            456899999999998   67889999999999999988221    1            89999999999   99999999


Q ss_pred             CCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCCC-------------CCccchHHHHHHHHHHHhC-
Q 039565           67 KSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTEL-------------TEKSDVDSFEIVILEIITG-  132 (188)
Q Consensus        67 ~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~-------------~~~~di~s~G~~l~~~~~g-  132 (188)
                      ||+||+++.++.++++|||++................++..|++||.             +.++|+||||+++|+++++ 
T Consensus       126 kp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~  205 (268)
T cd05086         126 ALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENA  205 (268)
T ss_pred             ccceEEEcCCccEEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCC
Confidence            99999999999999999998753211111111223456777888983             4679999999999999974 


Q ss_pred             CccccccCC-----------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHh
Q 039565          133 ILTVDLSFK-----------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVRE  178 (188)
Q Consensus       133 ~~p~~~~~~-----------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~  178 (188)
                      ..||+....                 ..........+.+++..|| .+|++||++++|++.|.
T Consensus       206 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         206 AQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             CCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence            567642211                 1112234567788999999 57999999999998874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.98  E-value=8.2e-33  Score=217.18  Aligned_cols=163  Identities=17%  Similarity=0.213  Sum_probs=136.1

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +..++||||+++++.   .+..+++|||+++++|.+++.+..            |++.||.|||+   .+++||||||+|
T Consensus        55 l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~N  131 (333)
T cd05600          55 LTTTKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHE---LGYIHRDLKPEN  131 (333)
T ss_pred             HHhCCCCCCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHH
Confidence            456789999999988   778999999999999999983221            99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCCC-
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKGE-  143 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~~-  143 (188)
                      |+++.++.+||+|||++.....     ......|++.|++||      ++.++|+|||||++|+|++|..||+.....+ 
T Consensus       132 il~~~~~~~kL~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~  206 (333)
T cd05600         132 FLIDASGHIKLTDFGLSKGIVT-----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNET  206 (333)
T ss_pred             EEECCCCCEEEEeCcCCccccc-----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHH
Confidence            9999999999999999875321     233456888999999      5788999999999999999999986432111 


Q ss_pred             ------------cC------HHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          144 ------------FD------IISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       144 ------------~~------~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                                  .+      ...+..+.+++..||..+|.+||+++++++.
T Consensus       207 ~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h  257 (333)
T cd05600         207 WENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH  257 (333)
T ss_pred             HHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence                        01      1236788999999999999999999999864

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.98  E-value=6.2e-32  Score=204.97  Aligned_cols=170  Identities=23%  Similarity=0.265  Sum_probs=136.8

Q ss_pred             cccccCCCeeeeccc--CCccEEEEecCCCCChhhhcCC-c----c---------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQGK-E----E---------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~~~-~----~---------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +++++|||++++++.  ....+++|||+++++|.+++.. .    .         |++.||.|||+   .+++|+|++|.
T Consensus        55 l~~l~~~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~  131 (260)
T cd05070          55 MKKLRHDKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER---MNYIHRDLRSA  131 (260)
T ss_pred             HHhcCCCceEEEEeEECCCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccc
Confidence            567899999999988  6778999999999999999822 1    1         99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCC-
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFK-  141 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~-  141 (188)
                      ||+++.++.++++|||.+........ .......++..|++||      .+.++|+||||+++|++++ |..||..... 
T Consensus       132 Nili~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~  210 (260)
T cd05070         132 NILVGDGLVCKIADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR  210 (260)
T ss_pred             eEEEeCCceEEeCCceeeeeccCccc-ccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH
Confidence            99999999999999999875431111 1111223445688998      4678999999999999998 8888854221 


Q ss_pred             -----------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhh
Q 039565          142 -----------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQ  179 (188)
Q Consensus       142 -----------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~  179 (188)
                                 .+.+...+..+.+++.+|+..+|++|||++++.+.|++
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         211 EVLEQVERGYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             HHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence                       12233456789999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.98  E-value=1.1e-32  Score=222.11  Aligned_cols=173  Identities=20%  Similarity=0.251  Sum_probs=145.2

Q ss_pred             CcccccCCCeeeeccc--CCccEEEEecCCCCChhhhcCCcc-------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            5 NRNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQGKEE-------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~-------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      .|..++|||||+++|+  ....|+|||.++-|.|..|+++..             |++.||+|||+   ...+|||+...
T Consensus       444 iMrnfdHphIikLIGv~~e~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeS---krfVHRDIAaR  520 (974)
T KOG4257|consen  444 IMRNFDHPHIIKLIGVCVEQPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLES---KRFVHRDIAAR  520 (974)
T ss_pred             HHHhCCCcchhheeeeeeccceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHh---hchhhhhhhhh
Confidence            4788999999999999  899999999999999999993333             99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCcccccc---
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLS---  139 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~---  139 (188)
                      |||++++..+|++|||+++.+.. ..........-+.-||+||      ++.++|+|-|||++||++. |..||..-   
T Consensus       521 NiLVsSp~CVKLaDFGLSR~~ed-~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNs  599 (974)
T KOG4257|consen  521 NILVSSPQCVKLADFGLSRYLED-DAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNS  599 (974)
T ss_pred             heeecCcceeeecccchhhhccc-cchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccccccc
Confidence            99999999999999999986532 2212222333345799999      7999999999999999984 77888432   


Q ss_pred             ---------CCCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhcc
Q 039565          140 ---------FKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGS  181 (188)
Q Consensus       140 ---------~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~  181 (188)
                               ...+.+..++..+..++.+||..+|.+||++.+|...|..+.
T Consensus       600 DVI~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~  650 (974)
T KOG4257|consen  600 DVIGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVL  650 (974)
T ss_pred             ceEEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHH
Confidence                     223456788999999999999999999999999998886554

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.98  E-value=4.3e-32  Score=207.90  Aligned_cols=174  Identities=17%  Similarity=0.158  Sum_probs=139.3

Q ss_pred             cccccCCCeeeeccc----CCccEEEEecCCCCChhhhcCCc--------c------------cHHHHHHHHhcCCCCCc
Q 039565            6 RNKLTGPLLVELIGK----QKNNALELGFRGNPELVDQQGKE--------E------------VCCPGLEYLHQGLKHPI   61 (188)
Q Consensus         6 l~~l~Hpniv~~~~~----~~~~~lv~e~~~~~~L~~~~~~~--------~------------~i~~~l~~Lh~~~~~~i   61 (188)
                      +.+++||||++++++    +...+++++|+++++|.+++...        .            |++.||+|||+   .++
T Consensus        62 l~~l~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~i  138 (280)
T cd05043          62 LYGLSHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHK---RGV  138 (280)
T ss_pred             HHhCCCCCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCE
Confidence            567899999999997    57789999999999999998221        1            89999999999   999


Q ss_pred             EEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCc
Q 039565           62 IQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GIL  134 (188)
Q Consensus        62 ~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~  134 (188)
                      +|+|++|+||+++.++.++++|||+++.+.............++..|++||      ++.++|+||||+++|++++ |..
T Consensus       139 ~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~  218 (280)
T cd05043         139 IHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQT  218 (280)
T ss_pred             eecccCHhhEEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCC
Confidence            999999999999999999999999987543211111112233455688998      5788999999999999998 888


Q ss_pred             cccccCC------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          135 TVDLSFK------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       135 p~~~~~~------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                      ||+....            ...+...+..+.+++.+||+.+|++|||+.++++.|+.+..
T Consensus       219 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~  278 (280)
T cd05043         219 PYVEIDPFEMAAYLKDGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA  278 (280)
T ss_pred             CcCcCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            8864211            11222345689999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.98  E-value=9.3e-32  Score=204.73  Aligned_cols=171  Identities=20%  Similarity=0.256  Sum_probs=135.9

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CC------c---c---------cHHHHHHHHhcCCCCCcEE
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GK------E---E---------VCCPGLEYLHQGLKHPIIQ   63 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~------~---~---------~i~~~l~~Lh~~~~~~i~h   63 (188)
                      +++++||||++++++   ....++++||+++++|.+++ +.      .   .         |++.||.|||+   .+++|
T Consensus        53 l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H  129 (269)
T cd05044          53 MSNFNHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQ---MHFIH  129 (269)
T ss_pred             HHhcCCCCeeeEeeeecCCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHh---CCccc
Confidence            567899999999998   77889999999999999998 21      0   0         89999999999   89999


Q ss_pred             eCCCCCcEEEccCC-----ceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-
Q 039565           64 RDMKSTNILLNEKV-----QAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-  131 (188)
Q Consensus        64 ~dl~~~nill~~~~-----~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-  131 (188)
                      +|++|+||+++.++     .++++|||++................++..|++||      ++.++|+||||+++|+|++ 
T Consensus       130 ~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~  209 (269)
T cd05044         130 RDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTL  209 (269)
T ss_pred             CCCChheEEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHc
Confidence            99999999999877     89999999886442111111112223455688888      5788999999999999998 


Q ss_pred             CCccccccC------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhh
Q 039565          132 GILTVDLSF------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQ  179 (188)
Q Consensus       132 g~~p~~~~~------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~  179 (188)
                      |..||....            ....+...+..+.+++.+||+.+|.+||+++++++.|++
T Consensus       210 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  269 (269)
T cd05044         210 GQQPYPALNNQEVLQHVTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN  269 (269)
T ss_pred             CCCCCcccCHHHHHHHHhcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence            888875321            112233456788999999999999999999999999863

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.98  E-value=1.6e-32  Score=215.50  Aligned_cols=166  Identities=20%  Similarity=0.219  Sum_probs=129.7

Q ss_pred             cccccCCCeeeeccc---C-----CccEEEEecCCCCChhhhcCCc-c-----------cHHHHHHHHhcCCCCCcEEeC
Q 039565            6 RNKLTGPLLVELIGK---Q-----KNNALELGFRGNPELVDQQGKE-E-----------VCCPGLEYLHQGLKHPIIQRD   65 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~-----~~~~lv~e~~~~~~L~~~~~~~-~-----------~i~~~l~~Lh~~~~~~i~h~d   65 (188)
                      +++++||||++++++   .     ...+++|||++ ++|.+++... .           |++.||.|||+   .+++|||
T Consensus        53 l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~d  128 (338)
T cd07859          53 LRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHT---ANVFHRD  128 (338)
T ss_pred             HHhCCCCCEeeecceEeccCCCCCceEEEEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHH---CCeecCC
Confidence            567899999999987   1     24799999997 6898888322 1           99999999999   9999999


Q ss_pred             CCCCcEEEccCCceEEecccCcccccCCCC-CcceeeecccccccCCC--------CCCccchHHHHHHHHHHHhCCccc
Q 039565           66 MKSTNILLNEKVQAKLADFGQSRISPVEGG-THMSTTIAGTAGFLNTE--------LTEKSDVDSFEIVILEIITGILTV  136 (188)
Q Consensus        66 l~~~nill~~~~~~kl~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~pe--------~~~~~di~s~G~~l~~~~~g~~p~  136 (188)
                      |||+||+++.++.+||+|||+++....... ........|+..|+|||        ++.++|+|||||++|+|++|..||
T Consensus       129 lkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf  208 (338)
T cd07859         129 LKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF  208 (338)
T ss_pred             CCHHHeEECCCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCC
Confidence            999999999999999999999875321111 11123356888999998        356899999999999999999988


Q ss_pred             cccCCCC-------------------------------------cC-----HHHHHHHHHHHHHccCcCCCCCCCHHHHH
Q 039565          137 DLSFKGE-------------------------------------FD-----IISVEKAVEIAMASVSSKVNRRPLMNQVV  174 (188)
Q Consensus       137 ~~~~~~~-------------------------------------~~-----~~~~~~~~~l~~~cl~~~p~~Rps~~~i~  174 (188)
                      .......                                     .+     ......+.+++..||+.+|++|||+++++
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l  288 (338)
T cd07859         209 PGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEAL  288 (338)
T ss_pred             CCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHh
Confidence            5321100                                     00     01134567999999999999999999998


Q ss_pred             H
Q 039565          175 M  175 (188)
Q Consensus       175 ~  175 (188)
                      +
T Consensus       289 ~  289 (338)
T cd07859         289 A  289 (338)
T ss_pred             c
Confidence            6

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.98  E-value=3.2e-32  Score=211.14  Aligned_cols=164  Identities=21%  Similarity=0.245  Sum_probs=129.7

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +++++||||++++++   ....++||||+. ++|.+++ ....            |++.||.|||+   .+++||||||+
T Consensus        57 l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~  132 (303)
T cd07869          57 LKGLKHANIVLLHDIIHTKETLTLVFEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQ---RYILHRDLKPQ  132 (303)
T ss_pred             HhhCCCCCcCeEEEEEecCCeEEEEEECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHH
Confidence            467899999999998   788999999997 5787777 3221            99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCCC
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFKG  142 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~  142 (188)
                      ||+++.++.+||+|||++.......  .......++..|+|||       ++.++|+||+||++|+|++|..||......
T Consensus       133 Nill~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~  210 (303)
T cd07869         133 NLLISDTGELKLADFGLARAKSVPS--HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDI  210 (303)
T ss_pred             HEEECCCCCEEECCCCcceeccCCC--ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccH
Confidence            9999999999999999886432111  1122345778899998       356789999999999999999998542110


Q ss_pred             -----------------Cc------------------CH---------HHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          143 -----------------EF------------------DI---------ISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       143 -----------------~~------------------~~---------~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                       .+                  +.         ..+..+.+++..|++.+|.+|||++++++
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~  287 (303)
T cd07869         211 QDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS  287 (303)
T ss_pred             HHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence                             00                  00         01245779999999999999999999987

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.98  E-value=6e-32  Score=204.69  Aligned_cols=168  Identities=23%  Similarity=0.310  Sum_probs=133.9

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||++++++   ....++++||+++++|.+++ .+..            |++.|++|||+   .+++|+|++|+
T Consensus        53 l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~  129 (256)
T cd05059          53 MMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLES---NGFIHRDLAAR  129 (256)
T ss_pred             HHhCCCCCEEEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHh
Confidence            567899999999988   77889999999999999998 2221            89999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCC-
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFK-  141 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~-  141 (188)
                      ||+++.++.++++|||.++... ...........++..|++||      ++.++|+||||+++|++++ |..||+.... 
T Consensus       130 ni~i~~~~~~kl~dfg~~~~~~-~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~  208 (256)
T cd05059         130 NCLVGEDNVVKVSDFGLARYVL-DDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS  208 (256)
T ss_pred             hEEECCCCcEEECCcccceecc-cccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH
Confidence            9999999999999999886432 11111111122334688888      5678999999999999998 7888853221 


Q ss_pred             -----------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHH
Q 039565          142 -----------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVR  177 (188)
Q Consensus       142 -----------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l  177 (188)
                                 ...+...+..+.+++.+||+.+|++|||++++++.|
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         209 EVVESVSAGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             HHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence                       122234567899999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.98  E-value=2.5e-32  Score=226.49  Aligned_cols=179  Identities=21%  Similarity=0.200  Sum_probs=143.9

Q ss_pred             Cccccc-CCCeeeeccc----------CCccEEEEecCCCCChhhhc-CCcc-------------cHHHHHHHHhcCCCC
Q 039565            5 NRNKLT-GPLLVELIGK----------QKNNALELGFRGNPELVDQQ-GKEE-------------VCCPGLEYLHQGLKH   59 (188)
Q Consensus         5 ~l~~l~-Hpniv~~~~~----------~~~~~lv~e~~~~~~L~~~~-~~~~-------------~i~~~l~~Lh~~~~~   59 (188)
                      .|++|+ |||||.+++.          .....|+||||.+|.|.+++ ++..             |+|+|+++||. ...
T Consensus        87 ~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~-~~p  165 (738)
T KOG1989|consen   87 IMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHY-LKP  165 (738)
T ss_pred             HHHHhcCCCceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc-CCC
Confidence            467777 9999999993          24567999999999999999 3332             99999999996 234


Q ss_pred             CcEEeCCCCCcEEEccCCceEEecccCcccccCCC-CCcce------eeecccccccCCC---------CCCccchHHHH
Q 039565           60 PIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEG-GTHMS------TTIAGTAGFLNTE---------LTEKSDVDSFE  123 (188)
Q Consensus        60 ~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~-~~~~~------~~~~~~~~~~~pe---------~~~~~di~s~G  123 (188)
                      .+||||||.+|+|++.++.+||+|||.+....... .....      -...-|+.|++||         +++++|||+||
T Consensus       166 PiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALG  245 (738)
T KOG1989|consen  166 PIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALG  245 (738)
T ss_pred             ccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHH
Confidence            59999999999999999999999999876432222 11111      1245678899999         68999999999


Q ss_pred             HHHHHHHhCCccccccCC---------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCcc
Q 039565          124 IVILEIITGILTVDLSFK---------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGSR  184 (188)
Q Consensus       124 ~~l~~~~~g~~p~~~~~~---------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~~  184 (188)
                      |++|.++-...||+..-.         -.-...++..+.+||..||+.+|++||++-|++..+..+....
T Consensus       246 clLYkLCy~t~PFe~sg~laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~  315 (738)
T KOG1989|consen  246 CLLYKLCYFTTPFEESGKLAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKP  315 (738)
T ss_pred             HHHHHHHHhCCCcCcCcceeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCC
Confidence            999999999999986511         1122478999999999999999999999999999887776653

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.98  E-value=6.6e-32  Score=208.28  Aligned_cols=171  Identities=19%  Similarity=0.256  Sum_probs=136.1

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc-------------c---------cHHHHHHHHhcCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE-------------E---------VCCPGLEYLHQGLKH   59 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~-------------~---------~i~~~l~~Lh~~~~~   59 (188)
                      +.+++||||++++++   ....++++||+++++|.+++ ...             .         |++.||+|||+   .
T Consensus        73 l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~---~  149 (296)
T cd05051          73 LSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLES---L  149 (296)
T ss_pred             HHhcCCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHH---c
Confidence            577899999999998   68899999999999999998 222             1         89999999999   9


Q ss_pred             CcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh--
Q 039565           60 PIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT--  131 (188)
Q Consensus        60 ~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~--  131 (188)
                      +++|+|+||+||+++.++.++++|||++................++..|++||      ++.++|+||||+++|++++  
T Consensus       150 ~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~  229 (296)
T cd05051         150 NFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLC  229 (296)
T ss_pred             CccccccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcC
Confidence            99999999999999999999999999987542222112222344566799998      4788999999999999998  


Q ss_pred             CCccccccCC-------------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhh
Q 039565          132 GILTVDLSFK-------------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQ  179 (188)
Q Consensus       132 g~~p~~~~~~-------------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~  179 (188)
                      +..||.....                   ...+...+..+.+++..||+.+|++|||+++|++.|++
T Consensus       230 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~  296 (296)
T cd05051         230 REQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR  296 (296)
T ss_pred             CCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence            5566643211                   01112234689999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.98  E-value=6e-32  Score=207.47  Aligned_cols=172  Identities=20%  Similarity=0.251  Sum_probs=132.6

Q ss_pred             cccccCCCeeeeccc-----CCccEEEEecCCCCChhhhc-CCc---c---------cHHHHHHHHhcCCCCCcEEeCCC
Q 039565            6 RNKLTGPLLVELIGK-----QKNNALELGFRGNPELVDQQ-GKE---E---------VCCPGLEYLHQGLKHPIIQRDMK   67 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-----~~~~~lv~e~~~~~~L~~~~-~~~---~---------~i~~~l~~Lh~~~~~~i~h~dl~   67 (188)
                      +.+++||||+++.++     ....++++||+++++|.+++ +..   .         |++.||.|||+   .+++|+|+|
T Consensus        59 l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~---~~i~H~dlk  135 (284)
T cd05081          59 LKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGS---KRYVHRDLA  135 (284)
T ss_pred             HHhCCCCCeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCC
Confidence            567899999999886     45689999999999999998 221   1         99999999999   999999999


Q ss_pred             CCcEEEccCCceEEecccCcccccCCCCCcce-eeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           68 STNILLNEKVQAKLADFGQSRISPVEGGTHMS-TTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        68 ~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      |+||+++.++.++++|||++............ ....++..|++||      ++.++|+||||+++|++++|..++....
T Consensus       136 p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~  215 (284)
T cd05081         136 TRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPP  215 (284)
T ss_pred             HhhEEECCCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcc
Confidence            99999999999999999998764322111111 1112233578888      5778999999999999999765432110


Q ss_pred             C-------C---------------------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhc
Q 039565          141 K-------G---------------------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQG  180 (188)
Q Consensus       141 ~-------~---------------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~  180 (188)
                      .       .                     ..+...+..+.+++..||..+|++|||+.+|++.|+.+
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         216 AEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             hhhhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence            0       0                     01112345799999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.97  E-value=4.7e-32  Score=209.64  Aligned_cols=172  Identities=24%  Similarity=0.290  Sum_probs=135.7

Q ss_pred             cccc-cCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-c------------------c---------cHHHHHHHH
Q 039565            6 RNKL-TGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-E------------------E---------VCCPGLEYL   53 (188)
Q Consensus         6 l~~l-~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~------------------~---------~i~~~l~~L   53 (188)
                      +.++ +||||+++++.   ....++++||+++++|.+++.+ .                  .         |++.||+||
T Consensus        56 l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~l  135 (297)
T cd05089          56 LCKLGHHPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYL  135 (297)
T ss_pred             HHhhcCCCchhheEEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHH
Confidence            3456 79999999998   6778999999999999999821 1                  1         899999999


Q ss_pred             hcCCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHH
Q 039565           54 HQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVIL  127 (188)
Q Consensus        54 h~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~  127 (188)
                      |+   .+++|+|+||+||+++.++.+|++|||++.....   .........+..|++||      ++.++|+||||+++|
T Consensus       136 H~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~  209 (297)
T cd05089         136 SE---KQFIHRDLAARNVLVGENLASKIADFGLSRGEEV---YVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLW  209 (297)
T ss_pred             HH---CCcccCcCCcceEEECCCCeEEECCcCCCccccc---eeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHH
Confidence            99   9999999999999999999999999998763211   00111112234688888      478899999999999


Q ss_pred             HHHh-CCccccccCC------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          128 EIIT-GILTVDLSFK------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       128 ~~~~-g~~p~~~~~~------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                      +|++ |..||.....            ...+...+..+.+++..||+.+|.+|||++++++.|+.+...
T Consensus       210 el~t~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~  278 (297)
T cd05089         210 EIVSLGGTPYCGMTCAELYEKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEA  278 (297)
T ss_pred             HHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence            9997 8888854321            112234567889999999999999999999999998876653

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.97  E-value=8e-32  Score=205.40  Aligned_cols=174  Identities=19%  Similarity=0.210  Sum_probs=139.7

Q ss_pred             cccccCCCeeeeccc--CCccEEEEecCCCCChhhhcCC-c---c---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQGK-E---E---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~~~-~---~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++  ....+++|||+++++|.+++.+ .   .         |++.||.|||+   .+++|+|++|+|
T Consensus        61 l~~~~h~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~~H~dl~p~n  137 (270)
T cd05056          61 MRQFDHPHIVKLIGVITENPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLES---KRFVHRDIAARN  137 (270)
T ss_pred             HHhCCCCchhceeEEEcCCCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccChhe
Confidence            467899999999998  7778999999999999999822 1   1         99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCC--
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFK--  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~--  141 (188)
                      |+++.++.++++|||++...... .........++..|++||      ++.++|+||||+++|++++ |..||.....  
T Consensus       138 ili~~~~~~~l~d~g~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~  216 (270)
T cd05056         138 VLVSSPDCVKLGDFGLSRYLEDE-SYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNND  216 (270)
T ss_pred             EEEecCCCeEEccCceeeecccc-cceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHH
Confidence            99999999999999988754321 111111223345688888      5778999999999999986 9988854321  


Q ss_pred             ----------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          142 ----------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       142 ----------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                                ...+...+..+.+++.+|+..+|.+|||+.++++.|+++...
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~  268 (270)
T cd05056         217 VIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE  268 (270)
T ss_pred             HHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence                      112334567899999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.97  E-value=5.9e-32  Score=204.64  Aligned_cols=167  Identities=23%  Similarity=0.265  Sum_probs=134.7

Q ss_pred             cccccCCCeeeeccc----CCccEEEEecCCCCChhhhc-CCcc-------------cHHHHHHHHhcCCCCCcEEeCCC
Q 039565            6 RNKLTGPLLVELIGK----QKNNALELGFRGNPELVDQQ-GKEE-------------VCCPGLEYLHQGLKHPIIQRDMK   67 (188)
Q Consensus         6 l~~l~Hpniv~~~~~----~~~~~lv~e~~~~~~L~~~~-~~~~-------------~i~~~l~~Lh~~~~~~i~h~dl~   67 (188)
                      +++++|+|++++++.    .+..++++||+++++|.+++ .+..             |++.||.|||+   .+++|+|++
T Consensus        53 l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlk  129 (256)
T cd05082          53 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEA---NNFVHRDLA  129 (256)
T ss_pred             HHhCCCCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeccccc
Confidence            567899999999986    56789999999999999998 2211             99999999999   999999999


Q ss_pred             CCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccC
Q 039565           68 STNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSF  140 (188)
Q Consensus        68 ~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~  140 (188)
                      |+||+++.++.++++|||++.......     ....++..|++||      ++.++|+||||+++|++++ |..||....
T Consensus       130 p~nil~~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~  204 (256)
T cd05082         130 ARNVLVSEDNVAKVSDFGLTKEASSTQ-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP  204 (256)
T ss_pred             hheEEEcCCCcEEecCCccceeccccC-----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC
Confidence            999999999999999999887432111     1122344688887      5778999999999999997 888875322


Q ss_pred             C------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhc
Q 039565          141 K------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQG  180 (188)
Q Consensus       141 ~------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~  180 (188)
                      .            ...+...+..+.+++.+|++.+|++|||+.++++.|+.+
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~  256 (256)
T cd05082         205 LKDVVPRVEKGYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI  256 (256)
T ss_pred             HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence            1            112233467889999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.97  E-value=3.5e-32  Score=211.01  Aligned_cols=173  Identities=25%  Similarity=0.300  Sum_probs=136.8

Q ss_pred             cccc-cCCCeeeeccc---CCccEEEEecCCCCChhhhcC-Cc------------------c---------cHHHHHHHH
Q 039565            6 RNKL-TGPLLVELIGK---QKNNALELGFRGNPELVDQQG-KE------------------E---------VCCPGLEYL   53 (188)
Q Consensus         6 l~~l-~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~-~~------------------~---------~i~~~l~~L   53 (188)
                      +.++ +||||++++++   .+..++++||+++++|.+++. ..                  .         |++.|++||
T Consensus        61 l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~L  140 (303)
T cd05088          61 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL  140 (303)
T ss_pred             HHHhcCCCCcceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHH
Confidence            4466 89999999998   778999999999999999882 11                  1         899999999


Q ss_pred             hcCCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHH
Q 039565           54 HQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVIL  127 (188)
Q Consensus        54 h~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~  127 (188)
                      |+   .+++|||+||+||+++.++.++++|||++....   .........++..|++||      ++.++|+||||+++|
T Consensus       141 H~---~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  214 (303)
T cd05088         141 SQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQE---VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLW  214 (303)
T ss_pred             Hh---CCccccccchheEEecCCCcEEeCccccCcccc---hhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHH
Confidence            99   999999999999999999999999999876321   101111122345688888      578899999999999


Q ss_pred             HHHh-CCccccccC------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCcc
Q 039565          128 EIIT-GILTVDLSF------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGSR  184 (188)
Q Consensus       128 ~~~~-g~~p~~~~~------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~~  184 (188)
                      ++++ |..||....            ..+.+...+..+.+++.+||+.+|+.||+++++++.|+.+...+
T Consensus       215 ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~  284 (303)
T cd05088         215 EIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER  284 (303)
T ss_pred             HHHhcCCCCcccCChHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence            9998 888874321            11122234567889999999999999999999999988765544

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.97  E-value=2.3e-32  Score=198.86  Aligned_cols=173  Identities=21%  Similarity=0.330  Sum_probs=139.1

Q ss_pred             ccccCCCeeeeccc--------CCccEEEEecCCCCChhhhcCCc---c-------------cHHHHHHHHhcCCCCCcE
Q 039565            7 NKLTGPLLVELIGK--------QKNNALELGFRGNPELVDQQGKE---E-------------VCCPGLEYLHQGLKHPII   62 (188)
Q Consensus         7 ~~l~Hpniv~~~~~--------~~~~~lv~e~~~~~~L~~~~~~~---~-------------~i~~~l~~Lh~~~~~~i~   62 (188)
                      ++++||||+++++.        ....|+++.|...|+|.+.+...   +             ++++||++||+. ...+.
T Consensus        73 rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yA  151 (302)
T KOG2345|consen   73 RKFNSPNVLRLVDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYA  151 (302)
T ss_pred             HhhCCcchHHHHHHHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCccc
Confidence            57899999999888        45589999999999999999222   1             899999999982 12499


Q ss_pred             EeCCCCCcEEEccCCceEEecccCcccccCC--CCC-----cceeeecccccccCCC---------CCCccchHHHHHHH
Q 039565           63 QRDMKSTNILLNEKVQAKLADFGQSRISPVE--GGT-----HMSTTIAGTAGFLNTE---------LTEKSDVDSFEIVI  126 (188)
Q Consensus        63 h~dl~~~nill~~~~~~kl~d~~~~~~~~~~--~~~-----~~~~~~~~~~~~~~pe---------~~~~~di~s~G~~l  126 (188)
                      |+|+||.||++++++.+++.|||.+...+..  +..     +....-..|-.|.|||         ++++.|||||||++
T Consensus       152 H~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtL  231 (302)
T KOG2345|consen  152 HRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTL  231 (302)
T ss_pred             ccCCCcceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHH
Confidence            9999999999999999999999987654311  111     1112245677899999         58999999999999


Q ss_pred             HHHHhCCccccccCC---------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhc
Q 039565          127 LEIITGILTVDLSFK---------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQG  180 (188)
Q Consensus       127 ~~~~~g~~p~~~~~~---------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~  180 (188)
                      |.|+-|..||+....               -......++.+.+++..|++.||.+||++.+++..++.+
T Consensus       232 Ya~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L  300 (302)
T KOG2345|consen  232 YAMMFGESPFERIYQQGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL  300 (302)
T ss_pred             HHHHHcCCcchHHhhcCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence            999999999964322               112234788999999999999999999999999988765

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.97  E-value=2.1e-32  Score=214.75  Aligned_cols=165  Identities=23%  Similarity=0.288  Sum_probs=133.1

Q ss_pred             ccc-cCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            7 NKL-TGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         7 ~~l-~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      .++ +||||+++++.   ....+++|||+++|+|.+++ .+..           |++.||.|||+   .+++||||||+|
T Consensus        59 ~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~N  135 (332)
T cd05614          59 EHVRQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHK---LGIVYRDIKLEN  135 (332)
T ss_pred             HhccCCCCcccEEEEEecCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHH
Confidence            345 59999999887   77789999999999999988 3222           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCCC-
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFKG-  142 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~-  142 (188)
                      |+++.++.++|+|||++..... ..........|+..|++||       .+.++|+|||||++|+|++|..||...... 
T Consensus       136 ili~~~~~~kl~DfG~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~  214 (332)
T cd05614         136 ILLDSEGHVVLTDFGLSKEFLS-EEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERN  214 (332)
T ss_pred             eEECCCCCEEEeeCcCCccccc-cCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCC
Confidence            9999999999999999875421 1122233457899999998       356899999999999999999999632211 


Q ss_pred             --------------CcCHHHHHHHHHHHHHccCcCCCCCC-----CHHHHHH
Q 039565          143 --------------EFDIISVEKAVEIAMASVSSKVNRRP-----LMNQVVM  175 (188)
Q Consensus       143 --------------~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~i~~  175 (188)
                                    ..+...+..+.+++..||+.+|++||     +++++++
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~  266 (332)
T cd05614         215 TQSEVSRRILKCDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE  266 (332)
T ss_pred             CHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence                          12223456788999999999999999     7778775

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.97  E-value=7.5e-32  Score=205.74  Aligned_cols=170  Identities=25%  Similarity=0.297  Sum_probs=134.5

Q ss_pred             cccc-cCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc------------------c---------cHHHHHHHH
Q 039565            6 RNKL-TGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE------------------E---------VCCPGLEYL   53 (188)
Q Consensus         6 l~~l-~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~------------------~---------~i~~~l~~L   53 (188)
                      +.++ +||||++++++   ....+++|||+++++|.+++ ...                  .         |++.|++||
T Consensus        49 l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~l  128 (270)
T cd05047          49 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL  128 (270)
T ss_pred             HHhhccCCCeeeEEEEEecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            3456 79999999998   67789999999999999988 211                  1         899999999


Q ss_pred             hcCCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHH
Q 039565           54 HQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVIL  127 (188)
Q Consensus        54 h~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~  127 (188)
                      |+   .+++|+|+||+||+++.++.++++|||++....   ..........+..|++||      ++.++|+||||+++|
T Consensus       129 H~---~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~---~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~  202 (270)
T cd05047         129 SQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQE---VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLW  202 (270)
T ss_pred             HH---CCEeecccccceEEEcCCCeEEECCCCCccccc---hhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHH
Confidence            99   999999999999999999999999999875321   000111122344688888      577899999999999


Q ss_pred             HHHh-CCccccccC------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhcc
Q 039565          128 EIIT-GILTVDLSF------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGS  181 (188)
Q Consensus       128 ~~~~-g~~p~~~~~------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~  181 (188)
                      ++++ |..||....            ..+.+...+..+.+++.+||+.+|.+|||++++++.|+++.
T Consensus       203 el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~  269 (270)
T cd05047         203 EIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  269 (270)
T ss_pred             HHHcCCCCCccccCHHHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence            9997 888884321            11222334567899999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.97  E-value=3.2e-32  Score=209.83  Aligned_cols=164  Identities=21%  Similarity=0.242  Sum_probs=130.0

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc---c---------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE---E---------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~---~---------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||++++++   ....+++|||+++ +|.+++ ...   .         |++.||+|||+   .+++||||||+
T Consensus        57 l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~  132 (288)
T cd07871          57 LKNLKHANIVTLHDIIHTERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHK---RKILHRDLKPQ  132 (288)
T ss_pred             HHhCCCCCEeeEEEEEcCCCeEEEEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHH
Confidence            567899999999998   6678999999984 898887 221   1         99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCCC
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFKG  142 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~  142 (188)
                      ||+++.++.+||+|||++.......  .......++..|+|||       ++.++|+||+|+++|+|++|..||......
T Consensus       133 Nil~~~~~~~kl~DfG~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~  210 (288)
T cd07871         133 NLLINEKGELKLADFGLARAKSVPT--KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVK  210 (288)
T ss_pred             HEEECCCCCEEECcCcceeeccCCC--ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            9999999999999999986432111  1122345678899998       467799999999999999999888432110


Q ss_pred             C------------------------------c-----------CHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          143 E------------------------------F-----------DIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       143 ~------------------------------~-----------~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      +                              +           .......+.+++..|++.||.+|||++|+++
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~  284 (288)
T cd07871         211 EELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR  284 (288)
T ss_pred             HHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            0                              0           0012356789999999999999999999975

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.97  E-value=3.2e-32  Score=212.54  Aligned_cols=162  Identities=21%  Similarity=0.300  Sum_probs=132.8

Q ss_pred             ccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc-c-----------cHHHHHHHHhcCCCCCcEEeCCCCCcEEE
Q 039565            9 LTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE-E-----------VCCPGLEYLHQGLKHPIIQRDMKSTNILL   73 (188)
Q Consensus         9 l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~-~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~nill   73 (188)
                      .+||||+++++.   ....++||||+++|+|..++... .           |++.||.|||+   .+++||||||+||++
T Consensus        53 ~~hp~i~~~~~~~~~~~~~~lv~e~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dlkp~Nill  129 (316)
T cd05592          53 WEHPFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHK---KGIIYRDLKLDNVLL  129 (316)
T ss_pred             cCCCCccceeeEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHeEE
Confidence            589999999988   77899999999999999988222 1           99999999999   999999999999999


Q ss_pred             ccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC------
Q 039565           74 NEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK------  141 (188)
Q Consensus        74 ~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~------  141 (188)
                      +.++.+||+|||++......  ........|+..|++||      ++.++|+|||||++|+|++|..||.....      
T Consensus       130 ~~~~~~kL~Dfg~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~  207 (316)
T cd05592         130 DKDGHIKIADFGMCKENMNG--EGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDS  207 (316)
T ss_pred             CCCCCEEEccCcCCeECCCC--CCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            99999999999998743211  12234467899999999      57889999999999999999999864321      


Q ss_pred             -----CCcCHHHHHHHHHHHHHccCcCCCCCCCHH-HHHH
Q 039565          142 -----GEFDIISVEKAVEIAMASVSSKVNRRPLMN-QVVM  175 (188)
Q Consensus       142 -----~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~-~i~~  175 (188)
                           ...+...+..+.+++..||+.+|.+||++. ++++
T Consensus       208 i~~~~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05592         208 ILNDRPHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQ  247 (316)
T ss_pred             HHcCCCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence                 122334556788999999999999999875 5543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.97  E-value=2.4e-32  Score=217.54  Aligned_cols=167  Identities=20%  Similarity=0.238  Sum_probs=135.9

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc--c---------cHHHHHHHHhcCCCCCcEEeCCCCCcE
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE--E---------VCCPGLEYLHQGLKHPIIQRDMKSTNI   71 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~--~---------~i~~~l~~Lh~~~~~~i~h~dl~~~ni   71 (188)
                      +..++||||+++++.   ....++||||+++|+|.+++.+.  .         |++.||+|||+   .+++||||||+||
T Consensus        97 l~~~~h~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NI  173 (370)
T cd05596          97 MAHANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNM  173 (370)
T ss_pred             HHhCCCCCcceEEEEEecCCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHE
Confidence            467899999999987   77889999999999999998322  2         99999999999   9999999999999


Q ss_pred             EEccCCceEEecccCcccccCCCCCcceeeecccccccCCC----------CCCccchHHHHHHHHHHHhCCccccccCC
Q 039565           72 LLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE----------LTEKSDVDSFEIVILEIITGILTVDLSFK  141 (188)
Q Consensus        72 ll~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe----------~~~~~di~s~G~~l~~~~~g~~p~~~~~~  141 (188)
                      +++.++.+||+|||++..... ..........|++.|+|||          ++.++|+|||||++|+|++|..||.....
T Consensus       174 Ll~~~~~~kL~DfG~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~  252 (370)
T cd05596         174 LLDKSGHLKLADFGTCMKMDA-NGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL  252 (370)
T ss_pred             EEcCCCCEEEEeccceeeccC-CCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCH
Confidence            999999999999999875421 1111223456889999998          35689999999999999999999864321


Q ss_pred             -------------CCcCH--HHHHHHHHHHHHccCcCCCC--CCCHHHHHHH
Q 039565          142 -------------GEFDI--ISVEKAVEIAMASVSSKVNR--RPLMNQVVMV  176 (188)
Q Consensus       142 -------------~~~~~--~~~~~~~~l~~~cl~~~p~~--Rps~~~i~~~  176 (188)
                                   ..++.  ..+..+.+++..|++.+|.+  |++++++++.
T Consensus       253 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h  304 (370)
T cd05596         253 VGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH  304 (370)
T ss_pred             HHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence                         11111  34678899999999999988  9999999763

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.97  E-value=1.3e-31  Score=203.88  Aligned_cols=172  Identities=20%  Similarity=0.247  Sum_probs=136.5

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||+++.++   .+..+++|||+++++|.+++ ...+            |++.|++|||+   .+++|+|++|+
T Consensus        60 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~  136 (268)
T cd05063          60 MGQFSHHNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSD---MNYVHRDLAAR  136 (268)
T ss_pred             HhcCCCCCeeEEEEEEccCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchh
Confidence            467899999999999   77889999999999999998 3221            89999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcc-eeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCC
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHM-STTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFK  141 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~  141 (188)
                      ||+++.++.++++|||++........... ......+..|++||      ++.++|+||||+++|++++ |..||.....
T Consensus       137 Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~  216 (268)
T cd05063         137 NILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN  216 (268)
T ss_pred             hEEEcCCCcEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH
Confidence            99999999999999998875431111111 11112234588888      4778999999999999997 8988853221


Q ss_pred             ------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhc
Q 039565          142 ------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQG  180 (188)
Q Consensus       142 ------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~  180 (188)
                                  .+.....+..+.+++.+||+.+|++||++.+|++.|+++
T Consensus       217 ~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         217 HEVMKAINDGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence                        112233466889999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.97  E-value=1.1e-31  Score=202.77  Aligned_cols=170  Identities=26%  Similarity=0.305  Sum_probs=139.5

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc---------c------------cHHHHHHHHhcCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE---------E------------VCCPGLEYLHQGLKHPI   61 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~---------~------------~i~~~l~~Lh~~~~~~i   61 (188)
                      +.+++|+||++++++   ....++++||+++++|.+++...         .            |++.||.|||+   .++
T Consensus        50 l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i  126 (262)
T cd00192          50 MKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS---KKF  126 (262)
T ss_pred             HhhcCCCChheeeeeecCCCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHc---CCc
Confidence            567889999999998   78899999999999999999332         2            99999999999   999


Q ss_pred             EEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCc
Q 039565           62 IQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GIL  134 (188)
Q Consensus        62 ~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~  134 (188)
                      +|+|++|+||+++.++.++++|||.+................++..|++||      ++.++|+||+|+++|++++ |..
T Consensus       127 ~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~  206 (262)
T cd00192         127 VHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGAT  206 (262)
T ss_pred             ccCccCcceEEECCCCcEEEcccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCC
Confidence            999999999999999999999999987654222212233345667889998      5778999999999999998 588


Q ss_pred             cccccCC------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHh
Q 039565          135 TVDLSFK------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVRE  178 (188)
Q Consensus       135 p~~~~~~------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~  178 (188)
                      ||+....            ...+...+..+.+++..||+.+|.+|||++++++.|+
T Consensus       207 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         207 PYPGLSNEEVLEYLRKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             CCCCCCHHHHHHHHHcCCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence            8854321            1223344678999999999999999999999999874

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.97  E-value=1e-31  Score=202.89  Aligned_cols=166  Identities=23%  Similarity=0.328  Sum_probs=137.1

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc---c-----------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE---E-----------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~---~-----------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +++++||||+++++.   .+..++++||+++++|.+++...   .           |++.||.|||+   .+++|+|++|
T Consensus        53 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~---~~i~h~dl~~  129 (256)
T cd08529          53 LAKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHS---KKILHRDIKS  129 (256)
T ss_pred             HHhcCCCCeehheeeeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCc
Confidence            578899999999988   77899999999999999998221   1           89999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC-
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK-  141 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~-  141 (188)
                      +||+++.++.++++|||.+......  ........++..|++||      ++.++|+||||++++++++|..||..... 
T Consensus       130 ~nili~~~~~~~l~df~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~  207 (256)
T cd08529         130 LNLFLDAYDNVKIGDLGVAKLLSDN--TNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG  207 (256)
T ss_pred             ceEEEeCCCCEEEcccccceeccCc--cchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH
Confidence            9999999999999999988754321  11223346778899999      47789999999999999999999864321 


Q ss_pred             -----------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          142 -----------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       142 -----------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                                 ...+......+.+++..||+.+|++||++.++++.
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  253 (256)
T cd08529         208 ALILKIIRGVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN  253 (256)
T ss_pred             HHHHHHHcCCCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence                       12233456789999999999999999999999863

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.97  E-value=1.1e-31  Score=204.64  Aligned_cols=172  Identities=22%  Similarity=0.256  Sum_probs=135.4

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-cc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-EE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||+++.++   ....++++||+++++|.+++.. .+            |++.|+.|||+   .+++|+|++|+
T Consensus        59 l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~---~g~~H~dl~p~  135 (269)
T cd05065          59 MGQFDHPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSE---MNYVHRDLAAR  135 (269)
T ss_pred             HHhCCCcCcceEEEEECCCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccChh
Confidence            467899999999998   7778999999999999999832 22            89999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeec---ccccccCCC------CCCccchHHHHHHHHHHHh-CCcccccc
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA---GTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLS  139 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~---~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~  139 (188)
                      ||+++.++.++++|||++................   .+..|++||      ++.++|+||||+++|++++ |..||...
T Consensus       136 nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~  215 (269)
T cd05065         136 NILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM  215 (269)
T ss_pred             eEEEcCCCcEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCC
Confidence            9999999999999999886543211111111111   133588888      4778999999999999886 88888542


Q ss_pred             CC------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhc
Q 039565          140 FK------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQG  180 (188)
Q Consensus       140 ~~------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~  180 (188)
                      ..            ...+...+..+.+++..||+.+|.+||++++|+..|+++
T Consensus       216 ~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         216 SNQDVINAIEQDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             CHHHHHHHHHcCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            21            112233456789999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.97  E-value=1.2e-31  Score=203.30  Aligned_cols=170  Identities=26%  Similarity=0.292  Sum_probs=137.2

Q ss_pred             cccccCCCeeeeccc--CCccEEEEecCCCCChhhhc-CCcc-------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQ-GKEE-------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~-~~~~-------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +++++||||++++++  .+..++++||+.+++|.+++ ...+             |++.||+|||+   .+++|+|++|+
T Consensus        55 l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~---~~i~H~dl~p~  131 (260)
T cd05067          55 MKQLQHPRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIER---KNYIHRDLRAA  131 (260)
T ss_pred             HHhcCCcCeeeEEEEEccCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHH
Confidence            467899999999999  77889999999999999988 2211             99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCC-
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFK-  141 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~-  141 (188)
                      ||+++.++.++++|||++..... ..........++..|++||      ++.++|+||||+++|++++ |..||..... 
T Consensus       132 ni~i~~~~~~~l~dfg~~~~~~~-~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~  210 (260)
T cd05067         132 NILVSETLCCKIADFGLARLIED-NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP  210 (260)
T ss_pred             hEEEcCCCCEEEccCcceeecCC-CCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH
Confidence            99999999999999998865431 1111112233456788888      4778999999999999998 8998853321 


Q ss_pred             -----------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhh
Q 039565          142 -----------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQ  179 (188)
Q Consensus       142 -----------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~  179 (188)
                                 .+.+...+..+.+++.+|++.+|++||+++++++.|+.
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         211 EVIQNLERGYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             HHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence                       12223345689999999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.97  E-value=2e-32  Score=214.14  Aligned_cols=160  Identities=23%  Similarity=0.263  Sum_probs=131.8

Q ss_pred             ccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc-c-----------cHHHHHHHHhcCCCCCcEEeCCCCCcE
Q 039565            7 NKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE-E-----------VCCPGLEYLHQGLKHPIIQRDMKSTNI   71 (188)
Q Consensus         7 ~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~-~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~ni   71 (188)
                      ..++||||+++++.   .+..++||||+.+|+|..++.+. .           |++.||.|||+   .+++||||||+||
T Consensus        51 ~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~---~givH~dikp~NI  127 (323)
T cd05575          51 KNVKHPFLVGLHYSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHS---LNIIYRDLKPENI  127 (323)
T ss_pred             hhCCCCCCCCeeEEEEeCCEEEEEEcCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHe
Confidence            56899999999887   77899999999999999988222 1           99999999999   9999999999999


Q ss_pred             EEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC----
Q 039565           72 LLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK----  141 (188)
Q Consensus        72 ll~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~----  141 (188)
                      +++.++.+||+|||++....  ..........|+..|++||      ++.++|+||||+++|+|++|..||.....    
T Consensus       128 ll~~~~~~kl~Dfg~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~  205 (323)
T cd05575         128 LLDSQGHVVLTDFGLCKEGI--EHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMY  205 (323)
T ss_pred             EECCCCcEEEeccCCCcccc--cCCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHH
Confidence            99999999999999886422  1112233456888999999      57889999999999999999999854321    


Q ss_pred             -------CCcCHHHHHHHHHHHHHccCcCCCCCCCHH
Q 039565          142 -------GEFDIISVEKAVEIAMASVSSKVNRRPLMN  171 (188)
Q Consensus       142 -------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~  171 (188)
                             ...+...+..+.+++..|++.+|.+||++.
T Consensus       206 ~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (323)
T cd05575         206 DNILNKPLRLKPNISVSARHLLEGLLQKDRTKRLGAK  242 (323)
T ss_pred             HHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence                   112233467889999999999999999874

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.97  E-value=1.4e-32  Score=215.32  Aligned_cols=164  Identities=21%  Similarity=0.238  Sum_probs=134.0

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-cc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-EE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +..++||||+++++.   .+..+++|||+++++|..++.+ ..           |++.||.|||+   .+++||||||+|
T Consensus        50 l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~giiHrDlkp~N  126 (325)
T cd05602          50 LKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPEN  126 (325)
T ss_pred             HHhCCCCCCCceeEEEEcCCeEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHH
Confidence            356899999999888   7889999999999999998822 21           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC---
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK---  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~---  141 (188)
                      |+++.++.++|+|||+++....  .........|+..|++||      ++.++|+|||||++|+|++|..||.....   
T Consensus       127 ili~~~~~~kl~DfG~a~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~  204 (325)
T cd05602         127 ILLDSQGHIVLTDFGLCKENIE--HNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM  204 (325)
T ss_pred             eEECCCCCEEEccCCCCccccc--CCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHH
Confidence            9999999999999999864321  112233457889999999      57899999999999999999999854221   


Q ss_pred             --------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHH
Q 039565          142 --------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVV  174 (188)
Q Consensus       142 --------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~  174 (188)
                              ...+...+..+.+++..|++.+|.+||++.+.+
T Consensus       205 ~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~  245 (325)
T cd05602         205 YDNILNKPLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDF  245 (325)
T ss_pred             HHHHHhCCcCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCH
Confidence                    122234566789999999999999999876433

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.97  E-value=1.2e-31  Score=202.03  Aligned_cols=169  Identities=20%  Similarity=0.263  Sum_probs=134.7

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||++++++   ....+++|||+++++|.+++ ....            |++.||.|+|+   .+++|+|++|+
T Consensus        46 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~~~H~dl~p~  122 (250)
T cd05085          46 LKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLES---KNCIHRDLAAR  122 (250)
T ss_pred             HHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccChh
Confidence            457889999999999   77889999999999999988 2221            89999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccC--
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSF--  140 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~--  140 (188)
                      ||+++.++.++++|||++.... ...........++..|++||      ++.++|+||||+++|++++ |..||....  
T Consensus       123 nili~~~~~~~l~d~g~~~~~~-~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~  201 (250)
T cd05085         123 NCLVGENNVLKISDFGMSRQED-DGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ  201 (250)
T ss_pred             eEEEcCCCeEEECCCccceecc-ccccccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH
Confidence            9999999999999999886432 11111111123345688888      4678999999999999998 888885321  


Q ss_pred             ----------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHh
Q 039565          141 ----------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVRE  178 (188)
Q Consensus       141 ----------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~  178 (188)
                                ....+...+..+.+++..|++.+|++||++.++++.|.
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         202 QAREQVEKGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence                      11223345678999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.97  E-value=3.4e-32  Score=209.45  Aligned_cols=163  Identities=21%  Similarity=0.251  Sum_probs=130.1

Q ss_pred             cccccCCCeeeeccc--------CCccEEEEecCCCCChhhhcCC-c----c---------cHHHHHHHHhcCCCCCcEE
Q 039565            6 RNKLTGPLLVELIGK--------QKNNALELGFRGNPELVDQQGK-E----E---------VCCPGLEYLHQGLKHPIIQ   63 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--------~~~~~lv~e~~~~~~L~~~~~~-~----~---------~i~~~l~~Lh~~~~~~i~h   63 (188)
                      +.+++||||++++++        ....++++||++ ++|.+++.. .    .         |++.||.|||+   .+++|
T Consensus        58 l~~~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~iiH  133 (290)
T cd07862          58 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS---HRVVH  133 (290)
T ss_pred             hcccCCCCcceEEEEEecccCCCCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeee
Confidence            445689999999886        345789999997 589888822 1    1         99999999999   99999


Q ss_pred             eCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCcccc
Q 039565           64 RDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVD  137 (188)
Q Consensus        64 ~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~  137 (188)
                      ||+||+||+++.++.++++|||++......   .......|+..|+|||      ++.++|+||||+++|++++|..||.
T Consensus       134 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~  210 (290)
T cd07862         134 RDLKPQNILVTSSGQIKLADFGLARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFR  210 (290)
T ss_pred             CCCCHHHEEEcCCCCEEEccccceEeccCC---cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcC
Confidence            999999999999999999999998754311   2233456788999998      5788999999999999999999885


Q ss_pred             ccCCC----------------Cc----------------------CHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          138 LSFKG----------------EF----------------------DIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       138 ~~~~~----------------~~----------------------~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      .....                .+                      ....+..+.+++..|++.+|++|||+.++++
T Consensus       211 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  286 (290)
T cd07862         211 GSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  286 (290)
T ss_pred             CCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence            42210                00                      0113446789999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.97  E-value=7.4e-32  Score=206.58  Aligned_cols=175  Identities=18%  Similarity=0.247  Sum_probs=139.7

Q ss_pred             cccccCCCeeeeccc--CCccEEEEecCCCCChhhhcCC-cc------------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQGK-EE------------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~~~-~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++  ....++++||+++|+|.+++.+ ..            |++.|++|||+   .+++|+|++|+|
T Consensus        63 l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~di~p~n  139 (279)
T cd05057          63 MASVDHPHVVRLLGICLSSQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEE---KRLVHRDLAARN  139 (279)
T ss_pred             HHhCCCCCcceEEEEEecCceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCEEecccCcce
Confidence            567899999999998  7889999999999999999832 21            99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCCC-
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFKG-  142 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~~-  142 (188)
                      |+++.++.++|+|||.++...............++..|++||      ++.++|+||||+++|++++ |..||+..... 
T Consensus       140 il~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~  219 (279)
T cd05057         140 VLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE  219 (279)
T ss_pred             EEEcCCCeEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH
Confidence            999999999999999987543221111111122345688888      4778999999999999998 99888643221 


Q ss_pred             -----------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          143 -----------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       143 -----------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                                 ..+......+.+++..||..+|+.||++.++++.|+.....
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~  271 (279)
T cd05057         220 IPDLLEKGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARD  271 (279)
T ss_pred             HHHHHhCCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence                       11223446788999999999999999999999999986443

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=9.2e-32  Score=204.01  Aligned_cols=168  Identities=21%  Similarity=0.261  Sum_probs=136.8

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++   ....++++||+++++|.+++.+..            |++.||.|||+   .+++|+|++|+|
T Consensus        58 l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~n  134 (263)
T cd06625          58 LKNLQHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHS---NMIVHRDIKGAN  134 (263)
T ss_pred             HHhCCCCCeeeeEEEEccCCeEEEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHH
Confidence            567899999999998   789999999999999999882211            89999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcc-eeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC---
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHM-STTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF---  140 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~---  140 (188)
                      |+++.++.++++|||.+........... .....++..|++||      .+.++|+||||+++|++++|..||....   
T Consensus       135 ilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~  214 (263)
T cd06625         135 ILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMA  214 (263)
T ss_pred             EEEcCCCCEEEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHH
Confidence            9999999999999999875431111110 12345677899999      5688999999999999999999985321   


Q ss_pred             ----------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          141 ----------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       141 ----------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                                ....+......+.+++..||..+|++|||+.++++.
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  260 (263)
T cd06625         215 AIFKIATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH  260 (263)
T ss_pred             HHHHHhccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence                      122334556788999999999999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.97  E-value=1e-31  Score=215.74  Aligned_cols=134  Identities=24%  Similarity=0.235  Sum_probs=106.0

Q ss_pred             cHHHHHHHHhcCCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccc
Q 039565           45 VCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSD  118 (188)
Q Consensus        45 ~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~d  118 (188)
                      |++.||+|||+   .+++|+|+||+||+++.++.++++|||+++...............++..|++||      ++.++|
T Consensus       247 qi~~aL~~LH~---~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  323 (401)
T cd05107         247 QVANGMEFLAS---KNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSD  323 (401)
T ss_pred             HHHHHHHHHhc---CCcCcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhH
Confidence            78999999999   999999999999999999999999999987542111111112234567799998      578899


Q ss_pred             hHHHHHHHHHHHh-CCccccccCC-------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhcc
Q 039565          119 VDSFEIVILEIIT-GILTVDLSFK-------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGS  181 (188)
Q Consensus       119 i~s~G~~l~~~~~-g~~p~~~~~~-------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~  181 (188)
                      +||||+++|++++ |..||.....             ...+...+..+.+++..||+.+|+.||++++|++.|+++.
T Consensus       324 vwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~  400 (401)
T cd05107         324 VWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL  400 (401)
T ss_pred             HHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence            9999999999998 7788753221             1122234578899999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.97  E-value=3.2e-32  Score=213.63  Aligned_cols=157  Identities=20%  Similarity=0.268  Sum_probs=128.5

Q ss_pred             ccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCcEEE
Q 039565            9 LTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTNILL   73 (188)
Q Consensus         9 l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~nill   73 (188)
                      .+||||++++++   ....++||||+++|+|..++ ....           |++.||.|||+   .+++||||||+||++
T Consensus        53 ~~hp~iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dikp~Nili  129 (329)
T cd05618          53 SNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLL  129 (329)
T ss_pred             CCCCcCCceeeEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEE
Confidence            379999999998   78899999999999999888 2222           99999999999   999999999999999


Q ss_pred             ccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC------
Q 039565           74 NEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK------  141 (188)
Q Consensus        74 ~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~------  141 (188)
                      +.++.++|+|||+++....  .........|+..|+|||      ++.++|+||||+++|+|++|..||+....      
T Consensus       130 ~~~~~~kL~DfG~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~  207 (329)
T cd05618         130 DSEGHIKLTDYGMCKEGLR--PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ  207 (329)
T ss_pred             CCCCCEEEeeCCccccccC--CCCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCccc
Confidence            9999999999999864221  112233467889999999      57789999999999999999999852110      


Q ss_pred             --------------CCcCHHHHHHHHHHHHHccCcCCCCCCCH
Q 039565          142 --------------GEFDIISVEKAVEIAMASVSSKVNRRPLM  170 (188)
Q Consensus       142 --------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  170 (188)
                                    ...+...+..+.+++..||+.+|.+||++
T Consensus       208 ~~~~~~~~~i~~~~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~  250 (329)
T cd05618         208 NTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGC  250 (329)
T ss_pred             ccHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence                          11233345678899999999999999983

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.97  E-value=6.5e-32  Score=207.30  Aligned_cols=165  Identities=19%  Similarity=0.225  Sum_probs=134.2

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-C---Ccc------------cHHHHHHHHhcCCCCCcEEeCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-G---KEE------------VCCPGLEYLHQGLKHPIIQRDM   66 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~---~~~------------~i~~~l~~Lh~~~~~~i~h~dl   66 (188)
                      +.+++||||+++.+.   ....+++|||+++|+|..++ .   ...            |++.||.|||+   .+++||||
T Consensus        47 l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl  123 (280)
T cd05608          47 LAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQ---RRIIYRDL  123 (280)
T ss_pred             HHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCC
Confidence            567899999999887   67789999999999998776 1   111            89999999999   99999999


Q ss_pred             CCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           67 KSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        67 ~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      ||+||+++.++.++++|||.+......  ........|+..|++||      ++.++|+||||+++|++++|..||....
T Consensus       124 kp~Nili~~~~~~~l~dfg~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~  201 (280)
T cd05608         124 KPENVLLDNDGNVRISDLGLAVELKDG--QSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARG  201 (280)
T ss_pred             CHHHEEECCCCCEEEeeCccceecCCC--CccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC
Confidence            999999999999999999988654311  11233456888999999      5778999999999999999999986432


Q ss_pred             CC---------------CcCHHHHHHHHHHHHHccCcCCCCCC-----CHHHHHH
Q 039565          141 KG---------------EFDIISVEKAVEIAMASVSSKVNRRP-----LMNQVVM  175 (188)
Q Consensus       141 ~~---------------~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~i~~  175 (188)
                      ..               ..+...+..+.+++..||+.+|++||     +++++++
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~  256 (280)
T cd05608         202 EKVENKELKQRILNDSVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT  256 (280)
T ss_pred             cchhHHHHHHhhcccCCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence            11               12233566889999999999999999     6777776

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.97  E-value=1.6e-32  Score=214.53  Aligned_cols=157  Identities=22%  Similarity=0.299  Sum_probs=129.9

Q ss_pred             ccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCcEEE
Q 039565            9 LTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTNILL   73 (188)
Q Consensus         9 l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~nill   73 (188)
                      .+||||++++++   .+..++||||+++|+|..++ ....           |++.||+|||+   .+++||||||+||++
T Consensus        53 ~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~---~~ivH~dlkp~NIli  129 (320)
T cd05590          53 RNHPFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHD---KGIIYRDLKLDNVLL  129 (320)
T ss_pred             cCCCchhceeeEEEcCCEEEEEEcCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEE
Confidence            369999999988   77889999999999999888 2222           99999999999   999999999999999


Q ss_pred             ccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCC-----
Q 039565           74 NEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKG-----  142 (188)
Q Consensus        74 ~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~-----  142 (188)
                      +.++.++|+|||++.....  .........|++.|+|||      ++.++|+||||+++|++++|..||......     
T Consensus       130 ~~~~~~kL~DfG~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~  207 (320)
T cd05590         130 DHEGHCKLADFGMCKEGIF--NGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEA  207 (320)
T ss_pred             CCCCcEEEeeCCCCeecCc--CCCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHH
Confidence            9999999999998764321  112233457889999999      577899999999999999999999643211     


Q ss_pred             ------CcCHHHHHHHHHHHHHccCcCCCCCCCH
Q 039565          143 ------EFDIISVEKAVEIAMASVSSKVNRRPLM  170 (188)
Q Consensus       143 ------~~~~~~~~~~~~l~~~cl~~~p~~Rps~  170 (188)
                            ..+...+..+.+++..|++.+|.+||++
T Consensus       208 i~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~  241 (320)
T cd05590         208 ILNDEVVYPTWLSQDAVDILKAFMTKNPTMRLGS  241 (320)
T ss_pred             HhcCCCCCCCCCCHHHHHHHHHHcccCHHHCCCC
Confidence                  1223356678999999999999999997

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.97  E-value=1.3e-31  Score=208.70  Aligned_cols=172  Identities=20%  Similarity=0.218  Sum_probs=135.5

Q ss_pred             ccc-cCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc------------------c---------cHHHHHHHHh
Q 039565            7 NKL-TGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE------------------E---------VCCPGLEYLH   54 (188)
Q Consensus         7 ~~l-~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~------------------~---------~i~~~l~~Lh   54 (188)
                      .++ +||||++++++   ....++++||+++|+|.+++ ...                  .         |++.||.|||
T Consensus        72 ~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH  151 (314)
T cd05099          72 KLIGKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLE  151 (314)
T ss_pred             HhccCCCCeeeEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHH
Confidence            345 59999999998   67789999999999999998 211                  0         8999999999


Q ss_pred             cCCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHH
Q 039565           55 QGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILE  128 (188)
Q Consensus        55 ~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~  128 (188)
                      +   .+++|+|+||+||+++.++.++++|||.++...............++..|++||      ++.++|+||||+++|+
T Consensus       152 ~---~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~e  228 (314)
T cd05099         152 S---RRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWE  228 (314)
T ss_pred             H---CCeeeccccceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHH
Confidence            9   999999999999999999999999999987543111111111223345689998      5778999999999999


Q ss_pred             HHh-CCccccccCC------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhcc
Q 039565          129 IIT-GILTVDLSFK------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGS  181 (188)
Q Consensus       129 ~~~-g~~p~~~~~~------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~  181 (188)
                      +++ |..||.....            .+.+...+..+.+++.+||+.+|++|||+.++++.|+++.
T Consensus       229 l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~  294 (314)
T cd05099         229 IFTLGGSPYPGIPVEELFKLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVL  294 (314)
T ss_pred             HHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence            998 7777743211            1122334567889999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.97  E-value=3.5e-32  Score=213.43  Aligned_cols=161  Identities=20%  Similarity=0.276  Sum_probs=131.1

Q ss_pred             cCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEc
Q 039565           10 TGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTNILLN   74 (188)
Q Consensus        10 ~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~   74 (188)
                      +||||++++++   ....++||||+++|+|..++ ....           |++.||.|||+   .+++||||||+||+++
T Consensus        54 ~hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nili~  130 (329)
T cd05588          54 NHPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHE---RGIIYRDLKLDNVLLD  130 (329)
T ss_pred             CCCCCCceEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEEC
Confidence            79999999998   77889999999999999888 2222           99999999999   9999999999999999


Q ss_pred             cCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCC------
Q 039565           75 EKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKG------  142 (188)
Q Consensus        75 ~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~------  142 (188)
                      .++.++|+|||+++...  ..........|+..|++||      ++.++|+||||+++|++++|..||+.....      
T Consensus       131 ~~~~~kL~Dfg~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~  208 (329)
T cd05588         131 AEGHIKLTDYGMCKEGI--RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQN  208 (329)
T ss_pred             CCCCEEECcCccccccc--cCCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCccccccccccccc
Confidence            99999999999886421  1112233467889999999      577899999999999999999999632111      


Q ss_pred             --------------CcCHHHHHHHHHHHHHccCcCCCCCCC------HHHHHH
Q 039565          143 --------------EFDIISVEKAVEIAMASVSSKVNRRPL------MNQVVM  175 (188)
Q Consensus       143 --------------~~~~~~~~~~~~l~~~cl~~~p~~Rps------~~~i~~  175 (188)
                                    ..+...+..+.+++..|++.+|.+||+      ++++++
T Consensus       209 ~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~  261 (329)
T cd05588         209 TEDYLFQVILEKQIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS  261 (329)
T ss_pred             chHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence                          122234457889999999999999997      667764

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.97  E-value=9.7e-32  Score=206.53  Aligned_cols=172  Identities=17%  Similarity=0.228  Sum_probs=134.9

Q ss_pred             cccccCCCeeeeccc-----CCccEEEEecCCCCChhhhc-CCc---c---------cHHHHHHHHhcCCCCCcEEeCCC
Q 039565            6 RNKLTGPLLVELIGK-----QKNNALELGFRGNPELVDQQ-GKE---E---------VCCPGLEYLHQGLKHPIIQRDMK   67 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-----~~~~~lv~e~~~~~~L~~~~-~~~---~---------~i~~~l~~Lh~~~~~~i~h~dl~   67 (188)
                      +++++||||+++.++     ....++++||+++++|.+++ ...   .         |++.||.|||+   .+++|+|+|
T Consensus        60 l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~---~gi~H~dlk  136 (284)
T cd05079          60 LRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLA  136 (284)
T ss_pred             HHhCCCCCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccc
Confidence            567899999999987     25678999999999999998 221   1         99999999999   999999999


Q ss_pred             CCcEEEccCCceEEecccCcccccCCCCC-cceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           68 STNILLNEKVQAKLADFGQSRISPVEGGT-HMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        68 ~~nill~~~~~~kl~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      |+||+++.++.++++|||++......... .......++..|++||      ++.++|+||||+++|+++++..|.....
T Consensus       137 p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~  216 (284)
T cd05079         137 ARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPM  216 (284)
T ss_pred             hheEEEcCCCCEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCcccc
Confidence            99999999999999999998754322211 1112344556788888      5778999999999999999765432110


Q ss_pred             ---------------------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhc
Q 039565          141 ---------------------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQG  180 (188)
Q Consensus       141 ---------------------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~  180 (188)
                                                 ....+...+..+.+++.+||+.+|++|||++++++.|+.+
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         217 TLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             chhhhhcccccccccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence                                       0011223457899999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.97  E-value=4e-32  Score=212.02  Aligned_cols=162  Identities=22%  Similarity=0.319  Sum_probs=132.9

Q ss_pred             ccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-cc-----------cHHHHHHHHhcCCCCCcEEeCCCCCcEEE
Q 039565            9 LTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-EE-----------VCCPGLEYLHQGLKHPIIQRDMKSTNILL   73 (188)
Q Consensus         9 l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~nill   73 (188)
                      ++||||++++++   .+..++||||+++|+|..++.. ..           |++.||.|||+   .+++|||+||+||++
T Consensus        53 ~~hp~iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~---~~ivHrdikp~Nil~  129 (316)
T cd05619          53 WEHPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHS---KGIVYRDLKLDNILL  129 (316)
T ss_pred             cCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEE
Confidence            589999999988   7788999999999999999822 21           99999999999   999999999999999


Q ss_pred             ccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC------
Q 039565           74 NEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK------  141 (188)
Q Consensus        74 ~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~------  141 (188)
                      +.++.++++|||++.....  .........|+..|+|||      ++.++|+|||||++|++++|..||.....      
T Consensus       130 ~~~~~~kl~Dfg~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~  207 (316)
T cd05619         130 DTDGHIKIADFGMCKENML--GDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQS  207 (316)
T ss_pred             CCCCCEEEccCCcceECCC--CCCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            9999999999998864221  112234567889999998      57889999999999999999999864321      


Q ss_pred             -----CCcCHHHHHHHHHHHHHccCcCCCCCCCHH-HHHH
Q 039565          142 -----GEFDIISVEKAVEIAMASVSSKVNRRPLMN-QVVM  175 (188)
Q Consensus       142 -----~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~-~i~~  175 (188)
                           ...+......+.+++..||+.+|++||++. ++.+
T Consensus       208 i~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05619         208 IRMDNPCYPRWLTREAKDILVKLFVREPERRLGVKGDIRQ  247 (316)
T ss_pred             HHhCCCCCCccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence                 112233456788999999999999999986 5543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.97  E-value=1.1e-31  Score=204.48  Aligned_cols=172  Identities=21%  Similarity=0.258  Sum_probs=136.3

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||++++++   .+..+++|||+++++|.+++ ....            |++.|++|||+   .+++|+|+||+
T Consensus        59 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~h~dlkp~  135 (267)
T cd05066          59 MGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAAR  135 (267)
T ss_pred             HHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeehhhchh
Confidence            467899999999998   77889999999999999998 3221            89999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcc-eeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCC
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHM-STTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFK  141 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~  141 (188)
                      ||+++.++.++++|||.+........... .....++..|++||      ++.++|+||||+++|++++ |..||.....
T Consensus       136 nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~  215 (267)
T cd05066         136 NILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSN  215 (267)
T ss_pred             cEEECCCCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCH
Confidence            99999999999999999875432211110 11112234688888      4778999999999999886 9988853221


Q ss_pred             ------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhc
Q 039565          142 ------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQG  180 (188)
Q Consensus       142 ------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~  180 (188)
                                  ...+...+..+.+++..|++.+|++||++.++++.|+.+
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         216 QDVIKAIEEGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             HHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence                        112223456889999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.97  E-value=2e-33  Score=240.24  Aligned_cols=169  Identities=22%  Similarity=0.247  Sum_probs=142.8

Q ss_pred             CcccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            5 NRNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      .+..++|||+|+.+|+   .+..++.||||++|+|++.++...            |++.|++|||+   .||+|||+||.
T Consensus      1287 vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~---~gIVHRDIK~a 1363 (1509)
T KOG4645|consen 1287 VLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHE---HGIVHRDIKPA 1363 (1509)
T ss_pred             HHHhccCccccccCceeecHHHHHHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHh---cCceecCCCcc
Confidence            4677899999999999   888999999999999999993332            99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCC--CCcceeeecccccccCCCC---------CCccchHHHHHHHHHHHhCCccccc
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEG--GTHMSTTIAGTAGFLNTEL---------TEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~pe~---------~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      ||+++.+|.+|++|||.+.......  -........||+.|||||.         ..++||||+||++.||+||+.||..
T Consensus      1364 NI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~ 1443 (1509)
T KOG4645|consen 1364 NILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAE 1443 (1509)
T ss_pred             ceeeecCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhh
Confidence            9999999999999999987543221  1123446789999999992         4578999999999999999999843


Q ss_pred             -------------cCCCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          139 -------------SFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       139 -------------~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                                   .-.+.++...+..-.+++..|++.||++|.++.|+++.
T Consensus      1444 ~dne~aIMy~V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1444 LDNEWAIMYHVAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred             ccchhHHHhHHhccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence                         12244666788889999999999999999999988874

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.97  E-value=4.8e-32  Score=211.54  Aligned_cols=161  Identities=22%  Similarity=0.314  Sum_probs=132.0

Q ss_pred             ccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCcEEE
Q 039565            9 LTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTNILL   73 (188)
Q Consensus         9 l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~nill   73 (188)
                      .+||||+++++.   .+..++||||+.+|+|..++ ....           |++.||+|||+   .+++||||||+||++
T Consensus        53 ~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nil~  129 (316)
T cd05620          53 WENPFLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHS---KGIIYRDLKLDNVML  129 (316)
T ss_pred             cCCCCccCeeEEEEeCCEEEEEECCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEE
Confidence            589999999988   77899999999999999888 2221           99999999999   999999999999999


Q ss_pred             ccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC------
Q 039565           74 NEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK------  141 (188)
Q Consensus        74 ~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~------  141 (188)
                      +.++.++|+|||+++...  ..........|+..|+|||      ++.++|+||||+++|+|++|..||.....      
T Consensus       130 ~~~~~~kl~Dfg~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~  207 (316)
T cd05620         130 DRDGHIKIADFGMCKENV--FGDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFES  207 (316)
T ss_pred             CCCCCEEeCccCCCeecc--cCCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            999999999999876421  1112234467889999999      57789999999999999999999864321      


Q ss_pred             -----CCcCHHHHHHHHHHHHHccCcCCCCCCCHH-HHH
Q 039565          142 -----GEFDIISVEKAVEIAMASVSSKVNRRPLMN-QVV  174 (188)
Q Consensus       142 -----~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~-~i~  174 (188)
                           ...+...+..+.+++..||+.+|++||++. ++.
T Consensus       208 ~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~  246 (316)
T cd05620         208 IRVDTPHYPRWITKESKDILEKLFERDPTRRLGVVGNIR  246 (316)
T ss_pred             HHhCCCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence                 112233456788999999999999999974 555

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.97  E-value=1.8e-31  Score=201.91  Aligned_cols=171  Identities=20%  Similarity=0.227  Sum_probs=138.2

Q ss_pred             CcccccCCCeeeeccc--CCccEEEEecCCCCChhhhc-CCc--c-----------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            5 NRNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQ-GKE--E-----------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~-~~~--~-----------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      .+++++||||+++++.  ....++++||+++++|.+++ +..  .           |++.||.|||+   .+++|+|++|
T Consensus        49 ~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~di~p  125 (257)
T cd05040          49 IMHSLDHENLIRLYGVVLTHPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLES---KRFIHRDLAA  125 (257)
T ss_pred             HHhhcCCCCccceeEEEcCCeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHh---CCccccccCc
Confidence            3678899999999998  77789999999999999999 332  1           99999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCCc-ceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccC
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGTH-MSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSF  140 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~  140 (188)
                      +||+++.++.++++|||++.......... ......++..|++||      ++.++|+||||+++|+|++ |..||+...
T Consensus       126 ~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~  205 (257)
T cd05040         126 RNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLS  205 (257)
T ss_pred             ccEEEecCCEEEeccccccccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCC
Confidence            99999999999999999987653222111 112244566789998      4778999999999999998 998884321


Q ss_pred             C-------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHh
Q 039565          141 K-------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVRE  178 (188)
Q Consensus       141 ~-------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~  178 (188)
                      .             ...+...+..+.+++..|++.+|++|||+.++++.|.
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         206 GSQILKKIDKEGERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             HHHHHHHHHhcCCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence            1             1122234578999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.97  E-value=7.2e-32  Score=221.88  Aligned_cols=168  Identities=23%  Similarity=0.264  Sum_probs=136.1

Q ss_pred             cccccCCCeeeeccc---CC--------ccEEEEecCCCCChhhhcC-Cc------c---------cHHHHHHHHhcCCC
Q 039565            6 RNKLTGPLLVELIGK---QK--------NNALELGFRGNPELVDQQG-KE------E---------VCCPGLEYLHQGLK   58 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~--------~~~lv~e~~~~~~L~~~~~-~~------~---------~i~~~l~~Lh~~~~   58 (188)
                      +..++|+||+++.+.   ..        ..+++|||+++|+|.+++. +.      .         |++.||.|||+   
T Consensus        85 l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~---  161 (496)
T PTZ00283         85 LLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHS---  161 (496)
T ss_pred             HhcCCCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHh---
Confidence            456789999998765   11        2679999999999999882 11      1         99999999999   


Q ss_pred             CCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhC
Q 039565           59 HPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITG  132 (188)
Q Consensus        59 ~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g  132 (188)
                      .+++||||||+||+++.++.+||+|||+++...............|++.|++||      ++.++|+||||+++|++++|
T Consensus       162 ~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG  241 (496)
T PTZ00283        162 KHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTL  241 (496)
T ss_pred             CCEecCCCCHHHEEEeCCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHC
Confidence            999999999999999999999999999987643222222334567899999999      57889999999999999999


Q ss_pred             CccccccCC------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          133 ILTVDLSFK------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       133 ~~p~~~~~~------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                      ..||+....            ...+...+..+.+++..||+.+|.+||++.++++.
T Consensus       242 ~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~  297 (496)
T PTZ00283        242 KRPFDGENMEEVMHKTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM  297 (496)
T ss_pred             CCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence            999864321            12334456789999999999999999999998763

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.97  E-value=8.5e-32  Score=206.37  Aligned_cols=163  Identities=21%  Similarity=0.237  Sum_probs=132.0

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc--c-----------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE--E-----------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~--~-----------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +.+++||||+++.+.   ....+++|||+++++|..++ ...  .           |++.||+|||+   .+++|+|+||
T Consensus        47 l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp  123 (277)
T cd05607          47 LEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHS---MDIVYRDMKP  123 (277)
T ss_pred             HHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHH---CCEEEccCCh
Confidence            567899999999887   77889999999999998887 211  1           89999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCC
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKG  142 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~  142 (188)
                      +||+++.++.++++|||++.....   ........|+..|++||      ++.++|+||+||++|++++|..||......
T Consensus       124 ~Nili~~~~~~~l~Dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~  200 (277)
T cd05607         124 ENVLLDDQGNCRLSDLGLAVELKD---GKTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEK  200 (277)
T ss_pred             HhEEEcCCCCEEEeeceeeeecCC---CceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcch
Confidence            999999999999999998875431   11223346788899998      578899999999999999999998542110


Q ss_pred             -------------Cc---CHHHHHHHHHHHHHccCcCCCCCCCHHHHH
Q 039565          143 -------------EF---DIISVEKAVEIAMASVSSKVNRRPLMNQVV  174 (188)
Q Consensus       143 -------------~~---~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~  174 (188)
                                   ..   ....+..+.+++..||+.+|++||++.+++
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~  248 (277)
T cd05607         201 VAKEELKRRTLEDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKN  248 (277)
T ss_pred             hhHHHHHHHhhccccccccccCCHHHHHHHHHHhccCHhhCCCCccch
Confidence                         00   012356789999999999999999996654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.97  E-value=2.7e-31  Score=201.75  Aligned_cols=171  Identities=19%  Similarity=0.283  Sum_probs=139.5

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC--c-----c---------cHHHHHHHHhcCCCCCcEEeCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK--E-----E---------VCCPGLEYLHQGLKHPIIQRDM   66 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~--~-----~---------~i~~~l~~Lh~~~~~~i~h~dl   66 (188)
                      +.+++|+|++++++.   .+..++++||+++++|.+++..  .     .         +++.||.|||+   .+++|+|+
T Consensus        56 l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl  132 (267)
T cd08224          56 LKQLDHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHS---KRIMHRDI  132 (267)
T ss_pred             HHhCCCCCeeeeeeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHh---CCEecCCc
Confidence            567899999999998   7788999999999999988721  1     1         89999999999   99999999


Q ss_pred             CCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           67 KSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        67 ~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      +|+||+++.++.++++|||.+......  ........++..|.+||      ++.++|+||||+++|++++|..||....
T Consensus       133 ~p~nil~~~~~~~~l~d~~~~~~~~~~--~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  210 (267)
T cd08224         133 KPANVFITATGVVKLGDLGLGRFFSSK--TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK  210 (267)
T ss_pred             ChhhEEECCCCcEEEeccceeeeccCC--CcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC
Confidence            999999999999999999987653211  11223345777888998      5678999999999999999998884321


Q ss_pred             C--------------CCcCH-HHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhcc
Q 039565          141 K--------------GEFDI-ISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGS  181 (188)
Q Consensus       141 ~--------------~~~~~-~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~  181 (188)
                      .              ...+. ..+..+.+++.+||..+|++|||+.+|+++|+++.
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~  266 (267)
T cd08224         211 MNLYSLCKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH  266 (267)
T ss_pred             ccHHHHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence            1              11222 45568999999999999999999999999998864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.97  E-value=4.6e-33  Score=217.32  Aligned_cols=162  Identities=27%  Similarity=0.300  Sum_probs=133.2

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc-c-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE-E-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~-~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||+++++.   ....++||||+.+++|.+++.+. .           |++.||.|||+   .+++||||||+|
T Consensus        52 l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~N  128 (318)
T cd05582          52 LAEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPEN  128 (318)
T ss_pred             HHhCCCCCcccEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHH
Confidence            567899999999888   77889999999999999998322 1           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC---
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK---  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~---  141 (188)
                      |+++.++.++|+|||++.....  .........|+..|++||      ++.++|+||||+++|+|++|..||.....   
T Consensus       129 il~~~~~~~kL~Dfg~~~~~~~--~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~  206 (318)
T cd05582         129 ILLDEEGHIKLTDFGLSKESID--HEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKET  206 (318)
T ss_pred             eEECCCCcEEEeeccCCcccCC--CCCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHH
Confidence            9999999999999999875321  112233457888999999      57789999999999999999999864321   


Q ss_pred             --------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHH
Q 039565          142 --------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQ  172 (188)
Q Consensus       142 --------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~  172 (188)
                              ...+...+..+.+++..||+.+|++||++.+
T Consensus       207 ~~~i~~~~~~~p~~~~~~~~~li~~~l~~~P~~R~~a~~  245 (318)
T cd05582         207 MTMILKAKLGMPQFLSPEAQSLLRALFKRNPANRLGAGP  245 (318)
T ss_pred             HHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence                    1123334667889999999999999999543

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.97  E-value=8.5e-33  Score=216.47  Aligned_cols=166  Identities=19%  Similarity=0.280  Sum_probs=134.7

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc-c-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE-E-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~-~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +..++||||+++.+.   ....++||||+++|+|..++.+. .           |++.||.|||+  ..+++||||||+|
T Consensus        49 l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~--~~~ivHrDikp~N  126 (325)
T cd05594          49 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLEN  126 (325)
T ss_pred             HHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCCCCe
Confidence            456889999999877   77899999999999999888222 1           99999999996  1699999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCC--
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKG--  142 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~--  142 (188)
                      |+++.++.+||+|||+++.....  ........|+..|+|||      ++.++|+||||+++|+|++|..||......  
T Consensus       127 Ill~~~~~~kL~Dfg~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~  204 (325)
T cd05594         127 LMLDKDGHIKITDFGLCKEGIKD--GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL  204 (325)
T ss_pred             EEECCCCCEEEecCCCCeecCCC--CcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHH
Confidence            99999999999999988643211  11223456889999998      578999999999999999999998543211  


Q ss_pred             ---------CcCHHHHHHHHHHHHHccCcCCCCCC-----CHHHHHH
Q 039565          143 ---------EFDIISVEKAVEIAMASVSSKVNRRP-----LMNQVVM  175 (188)
Q Consensus       143 ---------~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~i~~  175 (188)
                               .++...+..+.+++.+||+.+|++|+     ++.++++
T Consensus       205 ~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~  251 (325)
T cd05594         205 FELILMEEIRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ  251 (325)
T ss_pred             HHHHhcCCCCCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence                     12333466789999999999999997     8888875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.97  E-value=9.5e-32  Score=208.56  Aligned_cols=174  Identities=20%  Similarity=0.236  Sum_probs=137.1

Q ss_pred             cccccCCCeeeeccc--CCccEEEEecCCCCChhhhc-CCc---c---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQ-GKE---E---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~-~~~---~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++  ....++++||+++|+|.+++ ...   .         |++.||.|||+   .+++|+|+||+|
T Consensus        63 ~~~l~h~niv~~~~~~~~~~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dikp~N  139 (303)
T cd05110          63 MASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEE---RRLVHRDLAARN  139 (303)
T ss_pred             HHhCCCCCcccEEEEEcCCCceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhh---cCeeccccccce
Confidence            467899999999998  66678999999999999998 221   1         99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCC--
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFK--  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~--  141 (188)
                      |+++.++.+|++|||++................++..|++||      ++.++|+||||+++|++++ |..||.....  
T Consensus       140 ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~  219 (303)
T cd05110         140 VLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE  219 (303)
T ss_pred             eeecCCCceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            999999999999999987543211111112233455788888      4678999999999999997 8888753211  


Q ss_pred             ----------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          142 ----------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       142 ----------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                                ...+...+..+.+++..||..+|++||+++++++.|+.+..
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~  270 (303)
T cd05110         220 IPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMAR  270 (303)
T ss_pred             HHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence                      11112345678899999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=1.9e-31  Score=213.67  Aligned_cols=165  Identities=22%  Similarity=0.233  Sum_probs=130.8

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +++++||||++++++   ....++++|++. ++|..++ ....           |++.||.|||+   .+|+||||||+|
T Consensus       137 l~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~---~~IvHrDiKP~N  212 (391)
T PHA03212        137 LRAINHPSIIQLKGTFTYNKFTCLILPRYK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHE---NRIIHRDIKAEN  212 (391)
T ss_pred             HHhCCCCCCCCEeEEEEECCeeEEEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHh
Confidence            567899999999998   778899999996 6888887 3222           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC----
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF----  140 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~----  140 (188)
                      |+++.++.++|+|||++.... ...........|++.|++||      ++.++|+|||||++|++++|..|+-...    
T Consensus       213 Ill~~~~~vkL~DFG~a~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~  291 (391)
T PHA03212        213 IFINHPGDVCLGDFGAACFPV-DINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDG  291 (391)
T ss_pred             EEEcCCCCEEEEeCCcccccc-cccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccc
Confidence            999999999999999986432 11112233467899999999      5788999999999999999986542110    


Q ss_pred             ------------------CCCcC-------------------------------HHHHHHHHHHHHHccCcCCCCCCCHH
Q 039565          141 ------------------KGEFD-------------------------------IISVEKAVEIAMASVSSKVNRRPLMN  171 (188)
Q Consensus       141 ------------------~~~~~-------------------------------~~~~~~~~~l~~~cl~~~p~~Rps~~  171 (188)
                                        +.+++                               ...+..+.+++..||+.||.+|||++
T Consensus       292 ~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~  371 (391)
T PHA03212        292 DCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAE  371 (391)
T ss_pred             cCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHH
Confidence                              00000                               01244688999999999999999999


Q ss_pred             HHHH
Q 039565          172 QVVM  175 (188)
Q Consensus       172 ~i~~  175 (188)
                      ++++
T Consensus       372 elL~  375 (391)
T PHA03212        372 ALLD  375 (391)
T ss_pred             HHhc
Confidence            9986

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.97  E-value=1.6e-31  Score=203.16  Aligned_cols=171  Identities=18%  Similarity=0.237  Sum_probs=138.9

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC----cc------------cHHHHHHHHhcCCCCCcEEeCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK----EE------------VCCPGLEYLHQGLKHPIIQRDM   66 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~----~~------------~i~~~l~~Lh~~~~~~i~h~dl   66 (188)
                      +..++||||+++++.   .+..++++||+.+++|.+++..    ..            |++.|+.|||+   .+++|+|+
T Consensus        56 l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl  132 (267)
T cd08229          56 LKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHS---RRVMHRDI  132 (267)
T ss_pred             HHHccCCchhhhhheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCC
Confidence            467889999999998   7788999999999999988721    11            89999999999   99999999


Q ss_pred             CCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           67 KSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        67 ~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      +|+||+++.++.++++|||.+.......  .......++..|++||      .+.++|+||||+++|++++|..||....
T Consensus       133 ~p~nili~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~  210 (267)
T cd08229         133 KPANVFITATGVVKLGDLGLGRFFSSKT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK  210 (267)
T ss_pred             CHHHEEEcCCCCEEECcchhhhccccCC--cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCccccc
Confidence            9999999999999999999876543111  1122345777889998      4678999999999999999999885321


Q ss_pred             C---------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhcc
Q 039565          141 K---------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGS  181 (188)
Q Consensus       141 ~---------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~  181 (188)
                      .               .......+..+.+++..||..+|++|||+.+|++++++..
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~  266 (267)
T cd08229         211 MNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH  266 (267)
T ss_pred             chHHHHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence            1               0111235678999999999999999999999999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.97  E-value=1.1e-31  Score=208.43  Aligned_cols=174  Identities=20%  Similarity=0.205  Sum_probs=137.3

Q ss_pred             ccc-cCCCeeeeccc---CCccEEEEecCCCCChhhhc-CC------------------cc---------cHHHHHHHHh
Q 039565            7 NKL-TGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GK------------------EE---------VCCPGLEYLH   54 (188)
Q Consensus         7 ~~l-~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~------------------~~---------~i~~~l~~Lh   54 (188)
                      .++ +||||+++++.   ....++++||+++++|.+++ .+                  ..         |++.||+|||
T Consensus        78 ~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH  157 (307)
T cd05098          78 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLA  157 (307)
T ss_pred             HHhcCCCCEeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH
Confidence            345 79999999998   77889999999999999998 21                  01         8999999999


Q ss_pred             cCCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHH
Q 039565           55 QGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILE  128 (188)
Q Consensus        55 ~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~  128 (188)
                      +   .+++|+|+||+||+++.++.++++|||.+................++..|++||      ++.++|+||||+++|+
T Consensus       158 ~---~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~e  234 (307)
T cd05098         158 S---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWE  234 (307)
T ss_pred             H---CCcccccccHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHH
Confidence            9   999999999999999999999999999886543111111111223345789998      5788999999999999


Q ss_pred             HHh-CCccccccCC------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          129 IIT-GILTVDLSFK------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       129 ~~~-g~~p~~~~~~------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                      |++ |..||.....            .+.+...+..+.+++..||+.+|++|||+.++++.|+.+...
T Consensus       235 l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~  302 (307)
T cd05098         235 IFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL  302 (307)
T ss_pred             HHcCCCCCCCcCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence            998 7777643211            122334567888999999999999999999999999887543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=3.9e-32  Score=196.66  Aligned_cols=162  Identities=25%  Similarity=0.339  Sum_probs=141.3

Q ss_pred             ccccCCCeeeeccc---CCccEEEEecCCCCChhhhcC--Ccc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            7 NKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQG--KEE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         7 ~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~--~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.|+||||++++++   ....||++||.+.|++...+.  +..            |+|.|+.|+|.   .+|+|||+||+
T Consensus        77 s~L~hpnilrlY~~fhd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~---k~VIhRdiKpe  153 (281)
T KOG0580|consen   77 SHLRHPNILRLYGYFHDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHL---KRVIHRDIKPE  153 (281)
T ss_pred             cccCCccHHhhhhheeccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhcc---CCcccCCCCHH
Confidence            56899999999999   778899999999999999883  222            99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCCC
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKGE  143 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~~  143 (188)
                      |+|++..+.+|++|||-+...+    .....+.+||.-|.+||      .+..+|+|++|++.||++.|..||......+
T Consensus       154 nlLlg~~~~lkiAdfGwsV~~p----~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~e  229 (281)
T KOG0580|consen  154 NLLLGSAGELKIADFGWSVHAP----SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSE  229 (281)
T ss_pred             HhccCCCCCeeccCCCceeecC----CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHH
Confidence            9999999999999999887432    34566789999999999      5889999999999999999999997654322


Q ss_pred             -----------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          144 -----------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       144 -----------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                 ++...+....++++.|+..+|.+|.+..|+++
T Consensus       230 tYkrI~k~~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~  272 (281)
T KOG0580|consen  230 TYKRIRKVDLKFPSTISGGAADLISRLLVKNPIERLALTEVMD  272 (281)
T ss_pred             HHHHHHHccccCCcccChhHHHHHHHHhccCccccccHHHHhh
Confidence                       44556778999999999999999999999876

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.97  E-value=3e-32  Score=219.82  Aligned_cols=174  Identities=24%  Similarity=0.263  Sum_probs=144.2

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc--------------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE--------------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~--------------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      |+.|+|||+|+++|+   ....|+|+|||.+|+|.+|++...              ||+.|++||..   +..|||||.+
T Consensus       317 MKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEk---knFIHRDLAA  393 (1157)
T KOG4278|consen  317 MKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEK---KNFIHRDLAA  393 (1157)
T ss_pred             HHhhcCccHHHHhhhhccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHH---hhhhhhhhhh
Confidence            678999999999999   788999999999999999993322              99999999998   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccc---
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDL---  138 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~---  138 (188)
                      .|.|+.++..+|++|||+++++. .+.......-.-+.-|.|||      ++.++|+|+|||++||+.| |..|+..   
T Consensus       394 RNCLVgEnhiVKvADFGLsRlMt-gDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidl  472 (1157)
T KOG4278|consen  394 RNCLVGENHIVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDL  472 (1157)
T ss_pred             hhccccccceEEeeccchhhhhc-CCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccH
Confidence            99999999999999999999874 22211111112234578888      7999999999999999986 6666643   


Q ss_pred             ---------cCCCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          139 ---------SFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       139 ---------~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                               .+..+-+..++.++++++..||+-.|.+||++.+|-+.||.....
T Consensus       473 SqVY~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~  526 (1157)
T KOG4278|consen  473 SQVYGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSS  526 (1157)
T ss_pred             HHHHHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhcc
Confidence                     233445667889999999999999999999999999999876543

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.97  E-value=7e-32  Score=205.33  Aligned_cols=166  Identities=19%  Similarity=0.211  Sum_probs=133.7

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcC-Ccc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQG-KEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~-~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||+++++.   .+..++++||+++++|.+++. +..           |++.|+.|||+   .+++|+|++|.|
T Consensus        60 l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~n  136 (267)
T cd06646          60 VKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHS---KGKMHRDIKGAN  136 (267)
T ss_pred             HHhcCCCCeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHH
Confidence            567899999999988   788899999999999999882 222           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC---------CCCccchHHHHHHHHHHHhCCccccccCC
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE---------LTEKSDVDSFEIVILEIITGILTVDLSFK  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe---------~~~~~di~s~G~~l~~~~~g~~p~~~~~~  141 (188)
                      |+++.++.++++|||++.......  .......++..|++||         ++.++|+||||+++|++++|..||.....
T Consensus       137 ill~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~  214 (267)
T cd06646         137 ILLTDNGDVKLADFGVAAKITATI--AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHP  214 (267)
T ss_pred             EEECCCCCEEECcCccceeecccc--cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccch
Confidence            999999999999999987543111  1122345777888988         24579999999999999999988742211


Q ss_pred             C-------------C---cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          142 G-------------E---FDIISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       142 ~-------------~---~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                      .             .   .....+..+.+++..||+.+|++|||++++++.
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  265 (267)
T cd06646         215 MRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTH  265 (267)
T ss_pred             hhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence            0             0   011245789999999999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.97  E-value=3e-32  Score=213.04  Aligned_cols=162  Identities=23%  Similarity=0.319  Sum_probs=133.0

Q ss_pred             ccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCcEEE
Q 039565            9 LTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTNILL   73 (188)
Q Consensus         9 l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~nill   73 (188)
                      .+||||++++++   .+..++||||+++++|..++ +...           |++.||.|||+   .+++||||||+||++
T Consensus        53 ~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~Nill  129 (321)
T cd05591          53 AKHPFLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHR---HGVIYRDLKLDNILL  129 (321)
T ss_pred             cCCCCccceeeEEEcCCeEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEE
Confidence            379999999988   77899999999999999888 2221           89999999999   999999999999999


Q ss_pred             ccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCC-----
Q 039565           74 NEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKG-----  142 (188)
Q Consensus        74 ~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~-----  142 (188)
                      +.++.++|+|||++.....  .........|+..|+|||      ++.++|+||||+++|+|++|..||+.....     
T Consensus       130 ~~~~~~kL~Dfg~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~  207 (321)
T cd05591         130 DAEGHCKLADFGMCKEGIL--NGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFES  207 (321)
T ss_pred             CCCCCEEEeecccceeccc--CCccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHH
Confidence            9999999999998864321  112233456888999998      578899999999999999999999643221     


Q ss_pred             ------CcCHHHHHHHHHHHHHccCcCCCCCC-------CHHHHHH
Q 039565          143 ------EFDIISVEKAVEIAMASVSSKVNRRP-------LMNQVVM  175 (188)
Q Consensus       143 ------~~~~~~~~~~~~l~~~cl~~~p~~Rp-------s~~~i~~  175 (188)
                            ..+...+..+.+++..|++.+|++||       +++++++
T Consensus       208 i~~~~~~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~  253 (321)
T cd05591         208 ILHDDVLYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ  253 (321)
T ss_pred             HHcCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence                  12223457888999999999999999       7888775

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.97  E-value=1.9e-31  Score=210.40  Aligned_cols=175  Identities=20%  Similarity=0.196  Sum_probs=135.8

Q ss_pred             cccc-cCCCeeeeccc----CCccEEEEecCCCCChhhhc-CCc------------------------------------
Q 039565            6 RNKL-TGPLLVELIGK----QKNNALELGFRGNPELVDQQ-GKE------------------------------------   43 (188)
Q Consensus         6 l~~l-~Hpniv~~~~~----~~~~~lv~e~~~~~~L~~~~-~~~------------------------------------   43 (188)
                      +.++ +||||+++++.    ....+++|||+++|+|.+++ ...                                    
T Consensus        64 l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (343)
T cd05103          64 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITS  143 (343)
T ss_pred             HHhccCCccHhhhcceeecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhcccccc
Confidence            3455 68999999987    45678999999999999887 210                                    


Q ss_pred             ---------------------------------c---------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEccCCceEE
Q 039565           44 ---------------------------------E---------VCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKL   81 (188)
Q Consensus        44 ---------------------------------~---------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~~~kl   81 (188)
                                                       .         |++.||+|||+   .+++|+|+||.||+++.++.+++
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dikp~Nil~~~~~~~kl  220 (343)
T cd05103         144 SQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSENNVVKI  220 (343)
T ss_pred             ccccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCccCeEEEcCCCcEEE
Confidence                                             0         89999999999   99999999999999999999999


Q ss_pred             ecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCC-------------
Q 039565           82 ADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFK-------------  141 (188)
Q Consensus        82 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~-------------  141 (188)
                      +|||++................++..|++||      ++.++|+||||+++|++++ |..||.....             
T Consensus       221 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~  300 (343)
T cd05103         221 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR  300 (343)
T ss_pred             EecccccccccCcchhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCC
Confidence            9999887542111111111223445688988      5788999999999999997 8888753221             


Q ss_pred             CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          142 GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       142 ~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                      ...+...+..+.+++..||+.+|++|||+++|++.|+.+.+.
T Consensus       301 ~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~  342 (343)
T cd05103         301 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  342 (343)
T ss_pred             CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence            111222345789999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.97  E-value=2e-31  Score=202.65  Aligned_cols=167  Identities=22%  Similarity=0.322  Sum_probs=136.6

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +++++||||+++++.   ....++++||+++++|.+++.+..            |++.||+|||+   .+++|+|++|+|
T Consensus        60 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~---~~ivH~di~p~n  136 (267)
T cd06628          60 LKELQHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHN---RGIIHRDIKGAN  136 (267)
T ss_pred             HHhcCCCCeeeEEEEEEeCCccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHh---cCcccccCCHHH
Confidence            567899999999998   788899999999999999993222            89999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCC----CcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGG----THMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~----~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      |+++.++.++++|||.++.......    ........++..|++||      ++.++|+||||+++|++++|..||....
T Consensus       137 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~  216 (267)
T cd06628         137 ILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCT  216 (267)
T ss_pred             EEEcCCCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCcc
Confidence            9999999999999998875431111    11112345777899998      4678999999999999999999986421


Q ss_pred             ------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          141 ------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       141 ------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                  ....+...+..+.+++..||+.+|++||++.++++
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  263 (267)
T cd06628         217 QLQAIFKIGENASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK  263 (267)
T ss_pred             HHHHHHHHhccCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence                        12333456678899999999999999999999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.97  E-value=1.9e-31  Score=206.31  Aligned_cols=165  Identities=22%  Similarity=0.277  Sum_probs=135.5

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc--c---------cHHHHHHHHhcCCCCCcEEeCCCCCcE
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE--E---------VCCPGLEYLHQGLKHPIIQRDMKSTNI   71 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~--~---------~i~~~l~~Lh~~~~~~i~h~dl~~~ni   71 (188)
                      +.+++||||+++++.   ....++|+||+++++|.+++.+.  .         |++.||+|||+   .+++|+||+|+||
T Consensus        71 l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~---~gi~H~dLkp~Ni  147 (296)
T cd06654          71 MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNI  147 (296)
T ss_pred             HHhCCCCCEeeEEEEEEeCCEEEEeecccCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHE
Confidence            456789999999988   78899999999999999998322  2         89999999999   9999999999999


Q ss_pred             EEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCC---
Q 039565           72 LLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKG---  142 (188)
Q Consensus        72 ll~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~---  142 (188)
                      +++.++.++++|||.+......  ........++..|++||      .+.++|+||||+++|++++|..||......   
T Consensus       148 ll~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~  225 (296)
T cd06654         148 LLGMDGSVKLTDFGFCAQITPE--QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL  225 (296)
T ss_pred             EEcCCCCEEECccccchhcccc--ccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhH
Confidence            9999999999999987753211  11122346778899998      568899999999999999999998543211   


Q ss_pred             -----------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          143 -----------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       143 -----------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                 ..+......+.+++.+||..+|++|||++++++
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~  269 (296)
T cd06654         226 YLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (296)
T ss_pred             HHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence                       122344567899999999999999999999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.97  E-value=9.7e-32  Score=206.80  Aligned_cols=171  Identities=21%  Similarity=0.255  Sum_probs=134.3

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcC-Cc------------------------c---------cHHH
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQG-KE------------------------E---------VCCP   48 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~-~~------------------------~---------~i~~   48 (188)
                      +.+++||||++++++   +...++++||+++++|.+++. ..                        .         |++.
T Consensus        62 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~  141 (288)
T cd05050          62 MAEFDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAA  141 (288)
T ss_pred             HHhcCCCchheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHH
Confidence            467899999999998   778999999999999999982 10                        0         8999


Q ss_pred             HHHHHhcCCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHH
Q 039565           49 GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSF  122 (188)
Q Consensus        49 ~l~~Lh~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~  122 (188)
                      ||+|||+   .+++|+|++|.||+++.++.++++|||.+.................+..|++||      ++.++|+|||
T Consensus       142 aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~sl  218 (288)
T cd05050         142 GMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAY  218 (288)
T ss_pred             HHHHHHh---CCeecccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHH
Confidence            9999999   999999999999999999999999999886432111111111223345688888      5778999999


Q ss_pred             HHHHHHHHh-CCccccccCC------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhh
Q 039565          123 EIVILEIIT-GILTVDLSFK------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQ  179 (188)
Q Consensus       123 G~~l~~~~~-g~~p~~~~~~------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~  179 (188)
                      |+++|++++ |..||.....            ...+...+..+.+++.+||+.+|.+|||+.++++.|++
T Consensus       219 G~il~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~  288 (288)
T cd05050         219 GVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR  288 (288)
T ss_pred             HHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence            999999997 7667632211            11123345789999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.97  E-value=3.1e-31  Score=200.57  Aligned_cols=167  Identities=23%  Similarity=0.295  Sum_probs=135.8

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc----c---------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE----E---------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~----~---------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +.+++|+||++++++   ....++++||+++++|.+++ ...    .         |++.|+.|||+   .+++|+|++|
T Consensus        54 l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p  130 (256)
T cd05039          54 MTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEE---KNFVHRDLAA  130 (256)
T ss_pred             HHhcCCcceeeeEEEEcCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCccchhccc
Confidence            467899999999998   78889999999999999998 222    1         99999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCC
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFK  141 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~  141 (188)
                      .||+++.++.++++|||.+........     ....+..|.+||      ++.++|+||||+++|++++ |..||.....
T Consensus       131 ~Nili~~~~~~~l~d~g~~~~~~~~~~-----~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~  205 (256)
T cd05039         131 RNVLVSEDLVAKVSDFGLAKEASQGQD-----SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL  205 (256)
T ss_pred             ceEEEeCCCCEEEcccccccccccccc-----cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH
Confidence            999999999999999998875421111     122344577887      4668999999999999997 8888754321


Q ss_pred             ------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhc
Q 039565          142 ------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQG  180 (188)
Q Consensus       142 ------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~  180 (188)
                                  .+.+...+..+.+++.+||..+|++|||+++++++|+.+
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~  256 (256)
T cd05039         206 KDVVPHVEKGYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI  256 (256)
T ss_pred             HHHHHHHhcCCCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence                        122233467899999999999999999999999999763

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.97  E-value=5e-32  Score=211.59  Aligned_cols=161  Identities=20%  Similarity=0.296  Sum_probs=132.8

Q ss_pred             cCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEc
Q 039565           10 TGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTNILLN   74 (188)
Q Consensus        10 ~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~   74 (188)
                      +||||++++++   .+..++||||+++++|..++ +...           |++.||.|||+   .+++|+||||+||+++
T Consensus        54 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~  130 (318)
T cd05570          54 KHPFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHE---RGIIYRDLKLDNVLLD  130 (318)
T ss_pred             CCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh---CCeEccCCCHHHeEEC
Confidence            79999999998   77899999999999999888 2222           99999999999   9999999999999999


Q ss_pred             cCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC-------
Q 039565           75 EKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK-------  141 (188)
Q Consensus        75 ~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~-------  141 (188)
                      .++.++|+|||++.....  .........|+..|++||      ++.++|+|||||++|++++|..||.....       
T Consensus       131 ~~~~~kl~Dfg~~~~~~~--~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i  208 (318)
T cd05570         131 SEGHIKIADFGMCKEGIL--GGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSI  208 (318)
T ss_pred             CCCcEEecccCCCeecCc--CCCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHH
Confidence            999999999998864211  111223456888999999      57889999999999999999999864321       


Q ss_pred             ----CCcCHHHHHHHHHHHHHccCcCCCCCCCH-----HHHHH
Q 039565          142 ----GEFDIISVEKAVEIAMASVSSKVNRRPLM-----NQVVM  175 (188)
Q Consensus       142 ----~~~~~~~~~~~~~l~~~cl~~~p~~Rps~-----~~i~~  175 (188)
                          ...+...+..+.+++..||+.+|.+||++     .++++
T Consensus       209 ~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~  251 (318)
T cd05570         209 LEDEVRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG  251 (318)
T ss_pred             HcCCCCCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence                11233456788999999999999999998     77765

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.97  E-value=2.5e-31  Score=203.47  Aligned_cols=165  Identities=22%  Similarity=0.277  Sum_probs=135.6

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCcE
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTNI   71 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~ni   71 (188)
                      +++++||||+++++.   ....++|+||+++++|.+++....           |++.|+.|||+   .+++|+|++|+||
T Consensus        56 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~ivH~dl~p~ni  132 (277)
T cd06642          56 LSQCDSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHS---ERKIHRDIKAANV  132 (277)
T ss_pred             HHcCCCCccHhhhcccccCCceEEEEEccCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhc---CCeeccCCChheE
Confidence            567899999999998   778999999999999999883222           99999999999   9999999999999


Q ss_pred             EEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC----
Q 039565           72 LLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK----  141 (188)
Q Consensus        72 ll~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~----  141 (188)
                      +++.++.++++|||++.....  .........++..|++||      ++.++|+||||+++|++++|..|+.....    
T Consensus       133 ~i~~~~~~~l~dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~  210 (277)
T cd06642         133 LLSEQGDVKLADFGVAGQLTD--TQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVL  210 (277)
T ss_pred             EEeCCCCEEEccccccccccC--cchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHH
Confidence            999999999999998875431  111222345677788888      57789999999999999999998753221    


Q ss_pred             --------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 --------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 --------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                              .......+..+.+++..||+.+|++||++.++++
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  252 (277)
T cd06642         211 FLIPKNSPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLK  252 (277)
T ss_pred             hhhhcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence                    1122345667899999999999999999999997

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.97  E-value=4.4e-32  Score=212.04  Aligned_cols=161  Identities=22%  Similarity=0.258  Sum_probs=131.3

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +..++||||+++++.   .+..++||||+++++|..++ ....           |++.||.|||+   .+++||||||+|
T Consensus        50 l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~ivH~Dlkp~N  126 (321)
T cd05603          50 LKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHS---LNIIYRDLKPEN  126 (321)
T ss_pred             HHhCCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHH
Confidence            456899999999887   78899999999999998888 2221           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC---
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK---  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~---  141 (188)
                      |+++.++.+||+|||++....  ..........|+..|++||      ++.++|+|||||++|+|++|..||.....   
T Consensus       127 Ill~~~~~~kl~Dfg~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~  204 (321)
T cd05603         127 ILLDSQGHVVLTDFGLCKEGV--EPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQM  204 (321)
T ss_pred             eEECCCCCEEEccCCCCccCC--CCCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHH
Confidence            999999999999999886421  1112233456888999999      57789999999999999999999854321   


Q ss_pred             --------CCcCHHHHHHHHHHHHHccCcCCCCCCCHH
Q 039565          142 --------GEFDIISVEKAVEIAMASVSSKVNRRPLMN  171 (188)
Q Consensus       142 --------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~  171 (188)
                              ...+......+.+++.+|++.+|.+||++.
T Consensus       205 ~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (321)
T cd05603         205 YDNILHKPLQLPGGKTVAACDLLVGLLHKDQRRRLGAK  242 (321)
T ss_pred             HHHHhcCCCCCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence                    122333456788999999999999999753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.97  E-value=4.5e-32  Score=209.70  Aligned_cols=164  Identities=19%  Similarity=0.320  Sum_probs=142.1

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc---c---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE---E---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~---~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      |+.++||||++++++   .+...+||||..+|.|.+|+...   .         |+..|+.|||.   .+++|||||.+|
T Consensus       107 MSsLNHPhII~IyEVFENkdKIvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHk---nrVvHRDLKLEN  183 (668)
T KOG0611|consen  107 MSSLNHPHIIQIYEVFENKDKIVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHK---NRVVHRDLKLEN  183 (668)
T ss_pred             HhhcCCCceeehhhhhcCCceEEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhh---ccceecccchhh
Confidence            678999999999999   88999999999999999999222   2         99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCC--
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFK--  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~--  141 (188)
                      ||++.++..||+|||++-.+.   ......+++|++-|.+||       -.+.+|-||+|+++|.++.|.+|||....  
T Consensus       184 ILLD~N~NiKIADFGLSNly~---~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~  260 (668)
T KOG0611|consen  184 ILLDQNNNIKIADFGLSNLYA---DKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKR  260 (668)
T ss_pred             eeecCCCCeeeeccchhhhhc---cccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHH
Confidence            999999999999999987653   334567899999999999       37889999999999999999999986432  


Q ss_pred             -------CC-cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 -------GE-FDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 -------~~-~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                             +. .....+....-++.++|-.+|++|.|+++|..
T Consensus       261 lvrQIs~GaYrEP~~PSdA~gLIRwmLmVNP~RRATieDiAs  302 (668)
T KOG0611|consen  261 LVRQISRGAYREPETPSDASGLIRWMLMVNPERRATIEDIAS  302 (668)
T ss_pred             HHHHhhcccccCCCCCchHHHHHHHHHhcCcccchhHHHHhh
Confidence                   11 22344557788999999999999999999875

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.97  E-value=3.1e-31  Score=203.44  Aligned_cols=165  Identities=22%  Similarity=0.220  Sum_probs=134.1

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-C-Ccc-----------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-G-KEE-----------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~-~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +++++||||+++++.   ++..++++||+++++|..++ + ...           |++.||.|||+   .+++|+|++|+
T Consensus        56 l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~---~~i~H~dlkp~  132 (282)
T cd06643          56 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHE---NKIIHRDLKAG  132 (282)
T ss_pred             HHHCCCCCeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcc
Confidence            467899999999988   78899999999999999887 2 111           99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCCC-----------CCccchHHHHHHHHHHHhCCccccc
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTEL-----------TEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~-----------~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      ||+++.++.++++|||++.....  .........++..|++||.           +.++|+||||+++|++++|..||..
T Consensus       133 nili~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~  210 (282)
T cd06643         133 NILFTLDGDIKLADFGVSAKNTR--TIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHE  210 (282)
T ss_pred             cEEEccCCCEEEccccccccccc--cccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccc
Confidence            99999999999999998865321  1112233467788999982           3579999999999999999998853


Q ss_pred             cCC--------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          139 SFK--------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       139 ~~~--------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ...              ...+...+..+.+++..||+.+|.+||+++++++
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  261 (282)
T cd06643         211 LNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ  261 (282)
T ss_pred             cCHHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            221              1122345678999999999999999999999876

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.97  E-value=3.2e-31  Score=208.26  Aligned_cols=174  Identities=21%  Similarity=0.224  Sum_probs=137.1

Q ss_pred             cccc-cCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc------------------c---------cHHHHHHHH
Q 039565            6 RNKL-TGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE------------------E---------VCCPGLEYL   53 (188)
Q Consensus         6 l~~l-~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~------------------~---------~i~~~l~~L   53 (188)
                      +.++ +||||+++++.   ....++++||+++|+|.+++ .+.                  .         |++.||.||
T Consensus        71 l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~L  150 (334)
T cd05100          71 MKMIGKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYL  150 (334)
T ss_pred             HHhhcCCCCeeeeeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHH
Confidence            3456 79999999998   67789999999999999998 211                  0         899999999


Q ss_pred             hcCCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHH
Q 039565           54 HQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVIL  127 (188)
Q Consensus        54 h~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~  127 (188)
                      |+   .+++|+|+||+||+++.++.++|+|||+++...............++..|++||      ++.++|+||||+++|
T Consensus       151 H~---~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  227 (334)
T cd05100         151 AS---QKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLW  227 (334)
T ss_pred             HH---CCeeccccccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHH
Confidence            99   999999999999999999999999999887542111111111223345688998      577899999999999


Q ss_pred             HHHh-CCccccccC------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          128 EIIT-GILTVDLSF------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       128 ~~~~-g~~p~~~~~------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                      +|++ |..||....            ..+.+...+..+.+++..||+.+|++|||+.++++.|+++..
T Consensus       228 el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~  295 (334)
T cd05100         228 EIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT  295 (334)
T ss_pred             HHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence            9998 777774321            112233445688999999999999999999999999988763

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=1.8e-31  Score=205.29  Aligned_cols=165  Identities=23%  Similarity=0.243  Sum_probs=135.2

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CC--c--c---------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GK--E--E---------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~--~--~---------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +.+++||||+++++.   ++..+++|||+++++|.+++ ..  .  .         |++.||.|||+   .+++|+|++|
T Consensus        54 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp  130 (285)
T cd05605          54 LEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHR---ERIVYRDLKP  130 (285)
T ss_pred             HHhcCCCCEeeeeeeecCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCH
Confidence            567899999999887   67899999999999999887 21  1  1         99999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC-
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK-  141 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~-  141 (188)
                      +||+++.++.++++|||++......   .......|+..|++||      ++.++|+||+|+++|++++|..||..... 
T Consensus       131 ~Nil~~~~~~~~l~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~  207 (285)
T cd05605         131 ENILLDDYGHIRISDLGLAVEIPEG---ETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEK  207 (285)
T ss_pred             HHEEECCCCCEEEeeCCCceecCCC---CccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchh
Confidence            9999999999999999998754211   1122346788899999      57789999999999999999999965322 


Q ss_pred             --------------CCcCHHHHHHHHHHHHHccCcCCCCCC-----CHHHHHHH
Q 039565          142 --------------GEFDIISVEKAVEIAMASVSSKVNRRP-----LMNQVVMV  176 (188)
Q Consensus       142 --------------~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~i~~~  176 (188)
                                    ...+...+..+.+++..||+.||++||     +++++++.
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05605         208 VKREEVERRVKEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH  261 (285)
T ss_pred             hHHHHHHHHhhhcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence                          122334567789999999999999999     88888663

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.97  E-value=1.5e-31  Score=196.27  Aligned_cols=165  Identities=21%  Similarity=0.239  Sum_probs=134.3

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      |..++||||+.++++   ..+..+|+||++ .+|+..+ ++..            +++.|++|||+   ..|.|||+||.
T Consensus        55 Lqel~h~nIi~LiD~F~~~~~l~lVfEfm~-tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~---~~IlHRDlKPn  130 (318)
T KOG0659|consen   55 LQELKHPNIIELIDVFPHKSNLSLVFEFMP-TDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHS---KWILHRDLKPN  130 (318)
T ss_pred             HHHccCcchhhhhhhccCCCceEEEEEecc-ccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHh---hhhhcccCCcc
Confidence            667899999999999   889999999999 4999999 3332            89999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccC--
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSF--  140 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~--  140 (188)
                      |+|++.+|.+|++|||+++.+..+...  ......|.+|.|||       |+...|+||.||++.|++-+.+.|....  
T Consensus       131 NLLis~~g~lKiADFGLAr~f~~p~~~--~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDi  208 (318)
T KOG0659|consen  131 NLLISSDGQLKIADFGLARFFGSPNRI--QTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDI  208 (318)
T ss_pred             ceEEcCCCcEEeecccchhccCCCCcc--cccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchH
Confidence            999999999999999999987543332  22236778899999       7889999999999999998876332110  


Q ss_pred             -----------------C--------------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          141 -----------------K--------------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       141 -----------------~--------------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                                       +                    ...-...+....+++..++..||.+|.|++|.+++
T Consensus       209 dQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~  281 (318)
T KOG0659|consen  209 DQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH  281 (318)
T ss_pred             HHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence                             0                    00112334567899999999999999999999874

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.97  E-value=1.6e-31  Score=204.68  Aligned_cols=172  Identities=18%  Similarity=0.253  Sum_probs=136.1

Q ss_pred             cccccCCCeeeeccc-----CCccEEEEecCCCCChhhhc-CCc---c---------cHHHHHHHHhcCCCCCcEEeCCC
Q 039565            6 RNKLTGPLLVELIGK-----QKNNALELGFRGNPELVDQQ-GKE---E---------VCCPGLEYLHQGLKHPIIQRDMK   67 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-----~~~~~lv~e~~~~~~L~~~~-~~~---~---------~i~~~l~~Lh~~~~~~i~h~dl~   67 (188)
                      +++++||||++++++     ....++++||+++++|.+++ ...   .         |++.||.|||+   .+++|+|++
T Consensus        60 l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~  136 (284)
T cd05038          60 LRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGS---QRYIHRDLA  136 (284)
T ss_pred             HHhCCCCChheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHh---CCeecCCCC
Confidence            567899999999888     44689999999999999999 322   1         99999999999   999999999


Q ss_pred             CCcEEEccCCceEEecccCcccccCCCCCc-ceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           68 STNILLNEKVQAKLADFGQSRISPVEGGTH-MSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        68 ~~nill~~~~~~kl~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      |.||+++.++.++++|||.+.......... ......++..|++||      ++.++|+||||++++++++|..|+....
T Consensus       137 p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~  216 (284)
T cd05038         137 ARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPP  216 (284)
T ss_pred             HHhEEEcCCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCccccc
Confidence            999999999999999999987643111111 111123344577887      5778999999999999999998775432


Q ss_pred             CCC---------------------------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhc
Q 039565          141 KGE---------------------------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQG  180 (188)
Q Consensus       141 ~~~---------------------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~  180 (188)
                      ...                           .+...+..+.+++.+||+.+|++|||+.+|+++|+.+
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         217 AEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             chhccccccccccccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence            111                           1122346788999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.97  E-value=1.6e-32  Score=214.88  Aligned_cols=161  Identities=24%  Similarity=0.263  Sum_probs=131.4

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      ++.++||||+++++.   .+..++||||+++|+|..++ ....           |++.||.|||+   .+++||||||+|
T Consensus        50 l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~---~givH~Dlkp~N  126 (325)
T cd05604          50 LKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHS---INIVYRDLKPEN  126 (325)
T ss_pred             HHhCCCCCCccEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHH
Confidence            356899999999887   78899999999999999888 2222           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCC--
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKG--  142 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~--  142 (188)
                      |+++.++.++|+|||++....  ..........|+..|++||      ++.++|+|||||++|+|++|..||......  
T Consensus       127 Ill~~~~~~kL~DfG~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~  204 (325)
T cd05604         127 ILLDSQGHVVLTDFGLCKEGI--AQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEM  204 (325)
T ss_pred             eEECCCCCEEEeecCCcccCC--CCCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHH
Confidence            999999999999999986422  1112233457889999999      578899999999999999999998543211  


Q ss_pred             ---------CcCHHHHHHHHHHHHHccCcCCCCCCCHH
Q 039565          143 ---------EFDIISVEKAVEIAMASVSSKVNRRPLMN  171 (188)
Q Consensus       143 ---------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~  171 (188)
                               ......+..+.+++..|++.+|.+||++.
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~  242 (325)
T cd05604         205 YDNILHKPLVLRPGASLTAWSILEELLEKDRQRRLGAK  242 (325)
T ss_pred             HHHHHcCCccCCCCCCHHHHHHHHHHhccCHHhcCCCC
Confidence                     11223456788999999999999999875

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.97  E-value=4.2e-31  Score=199.22  Aligned_cols=170  Identities=21%  Similarity=0.231  Sum_probs=134.0

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +++++||||++++++   ....++++||+++++|.+++ +...            +++.|+.|||+   .+++|+|++|+
T Consensus        46 l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~---~~i~h~di~p~  122 (251)
T cd05041          46 LKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLES---KNCIHRDLAAR  122 (251)
T ss_pred             HHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCEehhhcCcc
Confidence            567899999999988   77889999999999999998 2221            88999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccC--
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSF--  140 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~--  140 (188)
                      ||+++.++.++++|||.+.................+..|++||      ++.++|+||||+++|++++ |..||....  
T Consensus       123 nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~  202 (251)
T cd05041         123 NCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ  202 (251)
T ss_pred             eEEEcCCCcEEEeeccccccccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH
Confidence            9999999999999999887432111111111122344588888      5778999999999999998 777774321  


Q ss_pred             ----------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHh
Q 039565          141 ----------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVRE  178 (188)
Q Consensus       141 ----------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~  178 (188)
                                ....+...+..+.+++.+|++.+|.+|||++++++.|+
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         203 QTRERIESGYRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             HHHHHHhcCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence                      11123345678999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.97  E-value=6.7e-31  Score=201.19  Aligned_cols=166  Identities=22%  Similarity=0.272  Sum_probs=137.4

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCcE
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTNI   71 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~ni   71 (188)
                      +++++||||+++++.   ....++++||+++++|.+++....           |++.|++|||+   .+++|+|++|+||
T Consensus        56 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~---~~ivH~dl~p~Ni  132 (277)
T cd06640          56 LSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHS---EKKIHRDIKAANV  132 (277)
T ss_pred             HHhCCCCCEeeEEEEEEECCEEEEEEecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCccCcCCChhhE
Confidence            457899999999999   788999999999999999883222           89999999999   9999999999999


Q ss_pred             EEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC-----
Q 039565           72 LLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF-----  140 (188)
Q Consensus        72 ll~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~-----  140 (188)
                      +++.++.++++|||.+......  ........++..|++||      .+.++|+||||+++|++++|..||....     
T Consensus       133 l~~~~~~~~l~dfg~~~~~~~~--~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~  210 (277)
T cd06640         133 LLSEQGDVKLADFGVAGQLTDT--QIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVL  210 (277)
T ss_pred             EEcCCCCEEEcccccceeccCC--ccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHh
Confidence            9999999999999998754321  11222345667788988      4778999999999999999999986432     


Q ss_pred             -------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          141 -------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       141 -------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                             ........+..+.+++..||+.+|++||+++++++.
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06640         211 FLIPKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH  253 (277)
T ss_pred             hhhhcCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence                   223344567889999999999999999999999774

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.97  E-value=6.8e-31  Score=231.09  Aligned_cols=172  Identities=22%  Similarity=0.334  Sum_probs=138.5

Q ss_pred             CcccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc---------cHHHHHHHHhcCCCCCcEEeCCCCCcEE
Q 039565            5 NRNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE---------VCCPGLEYLHQGLKHPIIQRDMKSTNIL   72 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~nil   72 (188)
                      .+++++|||||+++++   +...++||||+++|+|.++++...         |++.||+|||..+..+++|||+||+||+
T Consensus       736 ~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil  815 (968)
T PLN00113        736 DMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRNLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKII  815 (968)
T ss_pred             HHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhcCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEE
Confidence            4678899999999999   778899999999999999994433         9999999999544479999999999999


Q ss_pred             EccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCC----
Q 039565           73 LNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKG----  142 (188)
Q Consensus        73 l~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~----  142 (188)
                      ++.++..++. ++......      ......++..|+|||      ++.++|||||||++||+++|+.||+.....    
T Consensus       816 ~~~~~~~~~~-~~~~~~~~------~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~  888 (968)
T PLN00113        816 IDGKDEPHLR-LSLPGLLC------TDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSI  888 (968)
T ss_pred             ECCCCceEEE-eccccccc------cCCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcH
Confidence            9988877765 55433211      111235678899999      588999999999999999999997543210    


Q ss_pred             -------------------------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          143 -------------------------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       143 -------------------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                                               ..+..+..++.+++.+||+.+|++||||++++++|+++...
T Consensus       889 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~  954 (968)
T PLN00113        889 VEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRS  954 (968)
T ss_pred             HHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcc
Confidence                                     12334566788999999999999999999999999988653

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.97  E-value=7.5e-32  Score=199.17  Aligned_cols=160  Identities=21%  Similarity=0.320  Sum_probs=135.8

Q ss_pred             cCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEc
Q 039565           10 TGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTNILLN   74 (188)
Q Consensus        10 ~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~   74 (188)
                      -||+|+++.++   +...++|+|.|+.|.|.+++ ..-.           |+..|++|||.   ..|+||||||+|||++
T Consensus        81 GHP~II~l~D~yes~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa---~~IVHRDLKpENILld  157 (411)
T KOG0599|consen   81 GHPYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHA---RNIVHRDLKPENILLD  157 (411)
T ss_pred             CCCcEEEeeeeccCcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHH---hhhhhcccChhheeec
Confidence            49999999999   77788999999999999999 2222           99999999999   9999999999999999


Q ss_pred             cCCceEEecccCcccccCCCCCcceeeecccccccCCC------------CCCccchHHHHHHHHHHHhCCcccccc---
Q 039565           75 EKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------------LTEKSDVDSFEIVILEIITGILTVDLS---  139 (188)
Q Consensus        75 ~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------------~~~~~di~s~G~~l~~~~~g~~p~~~~---  139 (188)
                      ++..++++|||+++... ++  ......+||++|+|||            ++...|+|++|+++|.++.|..||...   
T Consensus       158 dn~~i~isDFGFa~~l~-~G--ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQm  234 (411)
T KOG0599|consen  158 DNMNIKISDFGFACQLE-PG--EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQM  234 (411)
T ss_pred             cccceEEeccceeeccC-Cc--hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHH
Confidence            99999999999998654 22  2345678999999999            688999999999999999999998432   


Q ss_pred             ------------CCCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          140 ------------FKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       140 ------------~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                  +..+-=...+....+++.+|++.||++|.|+++.++
T Consensus       235 lMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~La  282 (411)
T KOG0599|consen  235 LMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALA  282 (411)
T ss_pred             HHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence                        111111245668899999999999999999999876

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=9.7e-32  Score=218.15  Aligned_cols=156  Identities=23%  Similarity=0.333  Sum_probs=135.3

Q ss_pred             cCCCeeeeccc---CCccEEEEecCCCCChhhhcC--Ccc---------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEcc
Q 039565           10 TGPLLVELIGK---QKNNALELGFRGNPELVDQQG--KEE---------VCCPGLEYLHQGLKHPIIQRDMKSTNILLNE   75 (188)
Q Consensus        10 ~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~--~~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~   75 (188)
                      +||.+++++..   .+++++||||+.||++..+.+  +..         .++.||.|||+   ++|||||||.+|||+|.
T Consensus       427 ~HPFL~~L~~~fQT~~~l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~---~~IIYRDlKLdNiLLD~  503 (694)
T KOG0694|consen  427 RHPFLVNLFSCFQTKEHLFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHE---NGIIYRDLKLDNLLLDT  503 (694)
T ss_pred             cCCeEeecccccccCCeEEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHh---cCceeeecchhheEEcc
Confidence            79999999999   899999999999999655552  222         89999999999   99999999999999999


Q ss_pred             CCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC--------
Q 039565           76 KVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK--------  141 (188)
Q Consensus        76 ~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~--------  141 (188)
                      .|.+||+|||+++--.  .....+.+++||+.|+|||      |+..+|.|||||++|+|+.|+.||.....        
T Consensus       504 eGh~kiADFGlcKe~m--~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~  581 (694)
T KOG0694|consen  504 EGHVKIADFGLCKEGM--GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIV  581 (694)
T ss_pred             cCcEEecccccccccC--CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHh
Confidence            9999999999998532  2333677899999999999      79999999999999999999999964332        


Q ss_pred             ---CCcCHHHHHHHHHHHHHccCcCCCCCCCH
Q 039565          142 ---GEFDIISVEKAVEIAMASVSSKVNRRPLM  170 (188)
Q Consensus       142 ---~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  170 (188)
                         ..++...+.+..+++...+..+|++|.-+
T Consensus       582 ~d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  582 NDEVRYPRFLSKEAIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             cCCCCCCCcccHHHHHHHHHHhccCcccccCC
Confidence               22667788899999999999999999844

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.97  E-value=1.1e-31  Score=213.68  Aligned_cols=167  Identities=21%  Similarity=0.265  Sum_probs=133.8

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc--c---------cHHHHHHHHhcCCCCCcEEeCCCCCcE
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE--E---------VCCPGLEYLHQGLKHPIIQRDMKSTNI   71 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~--~---------~i~~~l~~Lh~~~~~~i~h~dl~~~ni   71 (188)
                      +..++||||+++++.   +...++||||+++|+|.+++...  .         |++.||+|||+   .+|+||||||+||
T Consensus        97 ~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~---~~IvHrDLKp~NI  173 (370)
T cd05621          97 MAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHS---MGLIHRDVKPDNM  173 (370)
T ss_pred             HHhCCCCCEeeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHE
Confidence            456789999999988   77899999999999999998322  2         99999999999   9999999999999


Q ss_pred             EEccCCceEEecccCcccccCCCCCcceeeecccccccCCC----------CCCccchHHHHHHHHHHHhCCccccccCC
Q 039565           72 LLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE----------LTEKSDVDSFEIVILEIITGILTVDLSFK  141 (188)
Q Consensus        72 ll~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe----------~~~~~di~s~G~~l~~~~~g~~p~~~~~~  141 (188)
                      +++.++.+||+|||++..... ..........|++.|+|||          ++.++|+||+||++|+|++|..||.....
T Consensus       174 Ll~~~~~~kL~DFG~a~~~~~-~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~  252 (370)
T cd05621         174 LLDKHGHLKLADFGTCMKMDE-TGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSL  252 (370)
T ss_pred             EECCCCCEEEEecccceeccc-CCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCH
Confidence            999999999999999875431 1111223457899999998          35789999999999999999999854321


Q ss_pred             -------------CCcC--HHHHHHHHHHHHHccCcCCCC--CCCHHHHHHH
Q 039565          142 -------------GEFD--IISVEKAVEIAMASVSSKVNR--RPLMNQVVMV  176 (188)
Q Consensus       142 -------------~~~~--~~~~~~~~~l~~~cl~~~p~~--Rps~~~i~~~  176 (188)
                                   ..++  ...+..+.+++..|+..++.+  |++++++++.
T Consensus       253 ~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h  304 (370)
T cd05621         253 VGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH  304 (370)
T ss_pred             HHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence                         1111  134667889999999865554  8899998874

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=9.4e-32  Score=217.39  Aligned_cols=165  Identities=21%  Similarity=0.221  Sum_probs=140.5

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc-------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE-------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~-------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      |..++||+||++++.   .+++|++.|||+||....++-..+             |++.||.|||+   ..|||||||+.
T Consensus        83 La~CdHP~ivkLl~ayy~enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs---~~iIHRDLKAG  159 (1187)
T KOG0579|consen   83 LAECDHPVIVKLLSAYYFENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHS---QNIIHRDLKAG  159 (1187)
T ss_pred             hhcCCChHHHHHHHHHhccCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhh---cchhhhhcccc
Confidence            567899999999988   899999999999999998882211             89999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-----------CCCccchHHHHHHHHHHHhCCccccc
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-----------LTEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-----------~~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      |||++-+|.++|+|||++--.  .........+.||++|||||           |+.++||||||+++.+|..+.+|-..
T Consensus       160 NiL~TldGdirLADFGVSAKn--~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhe  237 (1187)
T KOG0579|consen  160 NILLTLDGDIRLADFGVSAKN--KSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHE  237 (1187)
T ss_pred             ceEEEecCcEeeecccccccc--hhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccc
Confidence            999999999999999987532  22334566799999999999           68899999999999999999876532


Q ss_pred             c--------------CCCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          139 S--------------FKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       139 ~--------------~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      -              ...-.+..+...+.+++..||.+||..||++.++++
T Consensus       238 lnpMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~  288 (1187)
T KOG0579|consen  238 LNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK  288 (1187)
T ss_pred             cchHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence            1              111245678889999999999999999999999987

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.97  E-value=2e-31  Score=201.51  Aligned_cols=166  Identities=20%  Similarity=0.296  Sum_probs=136.7

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-------------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-------------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-------------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +++++||||+++.+.   ....++++||+++++|.+++ ....             |++.||.|||+   .+++|+|++|
T Consensus        52 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dl~p  128 (255)
T cd08219          52 LAKMKHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHE---KRVLHRDIKS  128 (255)
T ss_pred             HHhCCCCCcceEEEEEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCc
Confidence            567899999999988   78899999999999999887 2111             99999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC-
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK-  141 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~-  141 (188)
                      .||+++.++.++++|||.+.......  .......++..|++||      .+.++|+||||+++|+|++|..||+.... 
T Consensus       129 ~nili~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~  206 (255)
T cd08219         129 KNIFLTQNGKVKLGDFGSARLLTSPG--AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWK  206 (255)
T ss_pred             ceEEECCCCcEEEcccCcceeecccc--cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHH
Confidence            99999999999999999887543211  1223356777899998      57789999999999999999999864321 


Q ss_pred             -----------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          142 -----------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       142 -----------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                                 ...+...+..+.+++..||+.+|++|||+.+++..
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         207 NLILKVCQGSYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             HHHHHHhcCCCCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence                       11333456678999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.97  E-value=2.8e-31  Score=208.00  Aligned_cols=167  Identities=14%  Similarity=0.160  Sum_probs=128.8

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC---c--c---------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK---E--E---------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~---~--~---------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      ++.++||||++++++   ++..++|+||+++++|.+++..   .  .         |++.||+|||+   .+++|+|+||
T Consensus        53 l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiH~dlkp  129 (327)
T cd08227          53 SKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHH---MGYVHRSVKA  129 (327)
T ss_pred             HHhcCCCCeeeEEEEEEECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCh
Confidence            345799999999988   7889999999999999998822   1  1         89999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCCc-----ceeeecccccccCCC--------CCCccchHHHHHHHHHHHhCCcc
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGTH-----MSTTIAGTAGFLNTE--------LTEKSDVDSFEIVILEIITGILT  135 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~~-----~~~~~~~~~~~~~pe--------~~~~~di~s~G~~l~~~~~g~~p  135 (188)
                      +||+++.++.+++.||+............     ......++..|++||        ++.++|+|||||++|++++|..|
T Consensus       130 ~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~p  209 (327)
T cd08227         130 SHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVP  209 (327)
T ss_pred             hhEEEecCCcEEEcccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCC
Confidence            99999999999999987543221111100     011123455688888        45789999999999999999999


Q ss_pred             ccccCCC---------------------------------------------------------CcCHHHHHHHHHHHHH
Q 039565          136 VDLSFKG---------------------------------------------------------EFDIISVEKAVEIAMA  158 (188)
Q Consensus       136 ~~~~~~~---------------------------------------------------------~~~~~~~~~~~~l~~~  158 (188)
                      |+.....                                                         .........+.+++.+
T Consensus       210 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  289 (327)
T cd08227         210 FKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQ  289 (327)
T ss_pred             CCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHH
Confidence            8531100                                                         0111234578899999


Q ss_pred             ccCcCCCCCCCHHHHHH
Q 039565          159 SVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       159 cl~~~p~~Rps~~~i~~  175 (188)
                      ||+.||++|||++++++
T Consensus       290 ~l~~dP~~Rpt~~ell~  306 (327)
T cd08227         290 CLQRNPDARPSASTLLN  306 (327)
T ss_pred             HHhhCchhcCCHHHHhc
Confidence            99999999999999987

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.97  E-value=4.4e-31  Score=209.35  Aligned_cols=163  Identities=19%  Similarity=0.242  Sum_probs=128.7

Q ss_pred             cccccCCCeeeeccc---C------CccEEEEecCCCCChhhhc-CCcc---------cHHHHHHHHhcCCCCCcEEeCC
Q 039565            6 RNKLTGPLLVELIGK---Q------KNNALELGFRGNPELVDQQ-GKEE---------VCCPGLEYLHQGLKHPIIQRDM   66 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~------~~~~lv~e~~~~~~L~~~~-~~~~---------~i~~~l~~Lh~~~~~~i~h~dl   66 (188)
                      +.+++||||++++++   .      ...+++|||+++ +|...+ ....         |++.||.|||+   .+++||||
T Consensus        74 l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~---~~ivHrDl  149 (359)
T cd07876          74 LKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIHMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDL  149 (359)
T ss_pred             HHhCCCCCEeeeeeeeccCCCccccceeEEEEeCCCc-CHHHHHhccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCC
Confidence            467899999999987   1      246999999985 566555 2222         99999999999   99999999


Q ss_pred             CCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           67 KSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        67 ~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      ||+||+++.++.++|+|||+++...   .........++..|+|||      ++.++|+||||+++|+|++|..||....
T Consensus       150 kp~NIl~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~  226 (359)
T cd07876         150 KPSNIVVKSDCTLKILDFGLARTAC---TNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTD  226 (359)
T ss_pred             CHHHEEECCCCCEEEecCCCccccc---cCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence            9999999999999999999987432   111223356788899999      5788999999999999999999885321


Q ss_pred             CCC-----------------------------------------------------cCHHHHHHHHHHHHHccCcCCCCC
Q 039565          141 KGE-----------------------------------------------------FDIISVEKAVEIAMASVSSKVNRR  167 (188)
Q Consensus       141 ~~~-----------------------------------------------------~~~~~~~~~~~l~~~cl~~~p~~R  167 (188)
                      ...                                                     ........+.+++.+||+.||++|
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R  306 (359)
T cd07876         227 HIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKR  306 (359)
T ss_pred             HHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccC
Confidence            100                                                     000123467899999999999999


Q ss_pred             CCHHHHHH
Q 039565          168 PLMNQVVM  175 (188)
Q Consensus       168 ps~~~i~~  175 (188)
                      ||+.++++
T Consensus       307 ~t~~e~l~  314 (359)
T cd07876         307 ISVDEALR  314 (359)
T ss_pred             CCHHHHhc
Confidence            99999987

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.97  E-value=5.4e-31  Score=199.18  Aligned_cols=166  Identities=22%  Similarity=0.297  Sum_probs=134.1

Q ss_pred             cccccCCCeeeeccc--CCccEEEEecCCCCChhhhc-CCc----c---------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQ-GKE----E---------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~-~~~----~---------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++|||++++++.  .+..++++||+++++|.+++ ...    .         |++.|+.|||+   .+++|||++|+
T Consensus        53 l~~~~~~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~~~H~dl~p~  129 (254)
T cd05083          53 MTKLHHKNLVRLLGVILHNGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLES---KKLVHRDLAAR  129 (254)
T ss_pred             HHhCCCCCcCeEEEEEcCCCcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcc
Confidence            567899999999998  67789999999999999998 221    1         89999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCC-
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFK-  141 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~-  141 (188)
                      ||+++.++.++++|||.+......     ......+..|++||      ++.++|+||||+++|++++ |..||..... 
T Consensus       130 nili~~~~~~kl~Dfg~~~~~~~~-----~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~  204 (254)
T cd05083         130 NILVSEDGVAKVSDFGLARVGSMG-----VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK  204 (254)
T ss_pred             eEEEcCCCcEEECCCccceecccc-----CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH
Confidence            999999999999999988643211     11122334577777      5678999999999999997 8888854321 


Q ss_pred             -----------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhh
Q 039565          142 -----------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQ  179 (188)
Q Consensus       142 -----------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~  179 (188)
                                 ...+...+..+.+++.+||+.+|+.||+++++++.|+.
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         205 EVKECVEKGYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             HHHHHHhCCCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence                       11222345678899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.97  E-value=2.3e-31  Score=210.69  Aligned_cols=164  Identities=18%  Similarity=0.202  Sum_probs=129.3

Q ss_pred             cccccCCCeeeeccc---------CCccEEEEecCCCCChhhhc-CCcc---------cHHHHHHHHhcCCCCCcEEeCC
Q 039565            6 RNKLTGPLLVELIGK---------QKNNALELGFRGNPELVDQQ-GKEE---------VCCPGLEYLHQGLKHPIIQRDM   66 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---------~~~~~lv~e~~~~~~L~~~~-~~~~---------~i~~~l~~Lh~~~~~~i~h~dl   66 (188)
                      ++.++||||++++++         ....+++|||+++ +|...+ ....         |++.||.|||+   .+++|||+
T Consensus        70 l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDi  145 (355)
T cd07874          70 MKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDL  145 (355)
T ss_pred             HHHhCCCchhceeeeeeccccccccceeEEEhhhhcc-cHHHHHhhcCCHHHHHHHHHHHHHHHHHHHh---CCcccCCC
Confidence            456899999999987         1346899999985 666666 2222         99999999999   99999999


Q ss_pred             CCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           67 KSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        67 ~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      ||+||+++.++.+||+|||+++...   .........++..|+|||      ++.++|+|||||++|+|++|..||....
T Consensus       146 kp~Nill~~~~~~kl~Dfg~~~~~~---~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  222 (355)
T cd07874         146 KPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD  222 (355)
T ss_pred             ChHHEEECCCCCEEEeeCcccccCC---CccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            9999999999999999999987532   111223456788899998      5788999999999999999998885321


Q ss_pred             CC-----------------------------------------------------CcCHHHHHHHHHHHHHccCcCCCCC
Q 039565          141 KG-----------------------------------------------------EFDIISVEKAVEIAMASVSSKVNRR  167 (188)
Q Consensus       141 ~~-----------------------------------------------------~~~~~~~~~~~~l~~~cl~~~p~~R  167 (188)
                      ..                                                     .........+.+++.+|++.||++|
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R  302 (355)
T cd07874         223 YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR  302 (355)
T ss_pred             HHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhc
Confidence            00                                                     0001123467899999999999999


Q ss_pred             CCHHHHHHH
Q 039565          168 PLMNQVVMV  176 (188)
Q Consensus       168 ps~~~i~~~  176 (188)
                      ||++++++.
T Consensus       303 ps~~ell~h  311 (355)
T cd07874         303 ISVDEALQH  311 (355)
T ss_pred             CCHHHHhcC
Confidence            999999984

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=2.7e-32  Score=218.80  Aligned_cols=160  Identities=25%  Similarity=0.277  Sum_probs=137.2

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc--CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ--GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~--~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      |.+++|||+|.+.|+   ....|||||||- |+-.+++  .+.+           +.+.||+|||+   .+.||||+|+.
T Consensus        80 L~~l~HPntieYkgCyLre~TaWLVMEYCl-GSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS---~~~IHRDiKAG  155 (948)
T KOG0577|consen   80 LRQLRHPNTIEYKGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHS---HNRIHRDIKAG  155 (948)
T ss_pred             HHhccCCCcccccceeeccchHHHHHHHHh-ccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHH---hhHHhhhcccc
Confidence            568999999999999   778899999998 5777877  3333           88899999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC---------CCCccchHHHHHHHHHHHhCCccc-c--
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE---------LTEKSDVDSFEIVILEIITGILTV-D--  137 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe---------~~~~~di~s~G~~l~~~~~g~~p~-~--  137 (188)
                      |||++++|.+|++|||.+.+..      ..+.+.|||+|||||         |+-++||||+|+++.++...++|+ +  
T Consensus       156 NILLse~g~VKLaDFGSAsi~~------PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMN  229 (948)
T KOG0577|consen  156 NILLSEPGLVKLADFGSASIMA------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN  229 (948)
T ss_pred             ceEecCCCeeeeccccchhhcC------chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCch
Confidence            9999999999999999887643      356789999999999         789999999999999999988764 1  


Q ss_pred             ----------ccCCCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          138 ----------LSFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       138 ----------~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                ...+.-....++..+.+++..|+++-|..|||.++++.
T Consensus       230 AMSALYHIAQNesPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~  277 (948)
T KOG0577|consen  230 AMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLK  277 (948)
T ss_pred             HHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence                      01111124678899999999999999999999999876

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.97  E-value=5.4e-31  Score=199.18  Aligned_cols=169  Identities=24%  Similarity=0.321  Sum_probs=134.4

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++|||++++++.   ....++++||+++++|.+++ .+..            |++.|++|||+   .+++|+|++|+
T Consensus        53 l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~dl~p~  129 (256)
T cd05112          53 MMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLES---SNVIHRDLAAR  129 (256)
T ss_pred             HHhCCCCCeeeEEEEEccCCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccccc
Confidence            567899999999988   67889999999999999998 2221            88999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCCC
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFKG  142 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~~  142 (188)
                      ||+++.++.++++|||.+...... .........++..|++||      ++.++|+||||+++|++++ |..||+.....
T Consensus       130 ni~i~~~~~~~l~d~g~~~~~~~~-~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~  208 (256)
T cd05112         130 NCLVGENQVVKVSDFGMTRFVLDD-QYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS  208 (256)
T ss_pred             eEEEcCCCeEEECCCcceeecccC-cccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH
Confidence            999999999999999987643211 111111223345688888      4678999999999999998 88888643211


Q ss_pred             ------------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHh
Q 039565          143 ------------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVRE  178 (188)
Q Consensus       143 ------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~  178 (188)
                                  ..+...+..+.+++.+||+.+|++|||+.++++.|.
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~  256 (256)
T cd05112         209 EVVETINAGFRLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQLA  256 (256)
T ss_pred             HHHHHHhCCCCCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence                        112234677999999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.97  E-value=9e-31  Score=198.67  Aligned_cols=170  Identities=24%  Similarity=0.290  Sum_probs=136.8

Q ss_pred             cccccCCCeeeeccc--CCccEEEEecCCCCChhhhc-CCcc-------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQ-GKEE-------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~-~~~~-------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++|+||+++.+.  ....++++||+++++|.+++ ....             |++.||.|||+   .+++|+|++|+
T Consensus        55 l~~l~~~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~  131 (260)
T cd05073          55 MKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAA  131 (260)
T ss_pred             HHhcCCCCcceEEEEEcCCCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHh---CCccccccCcc
Confidence            567899999999888  77789999999999999998 3221             99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCC-
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFK-  141 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~-  141 (188)
                      |++++.++.++++|||.+..... ..........++..|++||      ++.++|+||||+++|++++ |..||..... 
T Consensus       132 ni~i~~~~~~~l~d~~~~~~~~~-~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~  210 (260)
T cd05073         132 NILVSASLVCKIADFGLARVIED-NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP  210 (260)
T ss_pred             eEEEcCCCcEEECCCcceeeccC-CCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH
Confidence            99999999999999998865421 1111122233455688888      4778999999999999998 8888853211 


Q ss_pred             -----------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhh
Q 039565          142 -----------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQ  179 (188)
Q Consensus       142 -----------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~  179 (188)
                                 .+.....+..+.+++.+|++.+|++||+++++.+.|+.
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         211 EVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             HHHHHHhCCCCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence                       12223455689999999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.97  E-value=2.4e-32  Score=208.03  Aligned_cols=172  Identities=20%  Similarity=0.227  Sum_probs=136.3

Q ss_pred             CcccccCCCeeeeccc-----CC---ccEEEEecCCCCChhhhcCC-----cc-----------cHHHHHHHHhcCCCCC
Q 039565            5 NRNKLTGPLLVELIGK-----QK---NNALELGFRGNPELVDQQGK-----EE-----------VCCPGLEYLHQGLKHP   60 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~-----~~---~~~lv~e~~~~~~L~~~~~~-----~~-----------~i~~~l~~Lh~~~~~~   60 (188)
                      -|++++|||||++.-+     ..   .+.+||||++. +|...++.     ..           |+.+||+|||+   .+
T Consensus        70 im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~---~~  145 (364)
T KOG0658|consen   70 IMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHS---HG  145 (364)
T ss_pred             HHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHh---cC
Confidence            3678999999999777     22   45699999995 99988842     11           99999999999   99


Q ss_pred             cEEeCCCCCcEEEccC-CceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhC
Q 039565           61 IIQRDMKSTNILLNEK-VQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITG  132 (188)
Q Consensus        61 i~h~dl~~~nill~~~-~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g  132 (188)
                      |.|||+||+|+|+|.. |.+||+|||.++... .+  ........+.+|.|||       ++.+.||||.||++.||+-|
T Consensus       146 IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~-~~--epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g  222 (364)
T KOG0658|consen  146 ICHRDIKPQNLLVDPDTGVLKICDFGSAKVLV-KG--EPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKG  222 (364)
T ss_pred             cccCCCChheEEEcCCCCeEEeccCCcceeec-cC--CCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcC
Confidence            9999999999999976 899999999998753 22  2345667788999999       79999999999999999999


Q ss_pred             CccccccCC---------------------------------------CC-cCHHHHHHHHHHHHHccCcCCCCCCCHHH
Q 039565          133 ILTVDLSFK---------------------------------------GE-FDIISVEKAVEIAMASVSSKVNRRPLMNQ  172 (188)
Q Consensus       133 ~~p~~~~~~---------------------------------------~~-~~~~~~~~~~~l~~~cl~~~p~~Rps~~~  172 (188)
                      +..|.....                                       .. +.........+++..+++.+|++|.++.+
T Consensus       223 ~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~  302 (364)
T KOG0658|consen  223 QPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALE  302 (364)
T ss_pred             CcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHH
Confidence            975532110                                       00 22344567889999999999999999998


Q ss_pred             HHH--HHhhccCc
Q 039565          173 VVM--VREQGSGS  183 (188)
Q Consensus       173 i~~--~l~~~~~~  183 (188)
                      ++.  .++.+.+.
T Consensus       303 ~l~h~fFdelr~~  315 (364)
T KOG0658|consen  303 ALAHPFFDELRDP  315 (364)
T ss_pred             HhcchhhHHhhCc
Confidence            876  44444443

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.97  E-value=6.9e-31  Score=199.11  Aligned_cols=170  Identities=24%  Similarity=0.277  Sum_probs=136.4

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc----c---------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE----E---------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~----~---------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +++++||||+++++.   ....++++||+++++|.+++ ...    .         |++.|+.|||+   .+++|+|++|
T Consensus        55 l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~---~~i~h~di~p  131 (261)
T cd05034          55 MKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLES---RNYIHRDLAA  131 (261)
T ss_pred             HhhCCCCCEeeeeeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcch
Confidence            568899999999998   57889999999999999998 322    1         89999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCC
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFK  141 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~  141 (188)
                      +||+++.++.++++|||.+..... ..........++..|++||      .+.++|+||||+++|++++ |..||.....
T Consensus       132 ~nili~~~~~~~l~d~g~~~~~~~-~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~  210 (261)
T cd05034         132 RNILVGENLVCKIADFGLARLIED-DEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN  210 (261)
T ss_pred             heEEEcCCCCEEECccccceeccc-hhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence            999999999999999998875431 1111111223345688887      5778999999999999998 8888854221


Q ss_pred             ------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhh
Q 039565          142 ------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQ  179 (188)
Q Consensus       142 ------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~  179 (188)
                                  ...+...+..+.+++.+|++.+|.+||+++++++.|+.
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         211 REVLEQVERGYRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence                        11222345689999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=9e-32  Score=212.30  Aligned_cols=167  Identities=19%  Similarity=0.250  Sum_probs=135.9

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +..++||||+++++.   .+..++||||+++++|.+++ ....           |++.||+|||+   .+++||||||+|
T Consensus        55 l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~---~giiH~Dlkp~N  131 (350)
T cd05573          55 LADADSPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHK---LGFIHRDIKPDN  131 (350)
T ss_pred             HHhcCCCCccchhhheecCCeEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHH
Confidence            567889999999888   78899999999999999999 3222           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCC---------------------------CCcceeeecccccccCCC------CCCcc
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEG---------------------------GTHMSTTIAGTAGFLNTE------LTEKS  117 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~pe------~~~~~  117 (188)
                      |+++.++.++|+|||++.......                           .........|+..|+|||      ++.++
T Consensus       132 Ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  211 (350)
T cd05573         132 ILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLEC  211 (350)
T ss_pred             eEECCCCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCce
Confidence            999999999999999987543211                           001123456888999999      57899


Q ss_pred             chHHHHHHHHHHHhCCccccccCCC-------------CcCH--HHHHHHHHHHHHccCcCCCCCCC-HHHHHHH
Q 039565          118 DVDSFEIVILEIITGILTVDLSFKG-------------EFDI--ISVEKAVEIAMASVSSKVNRRPL-MNQVVMV  176 (188)
Q Consensus       118 di~s~G~~l~~~~~g~~p~~~~~~~-------------~~~~--~~~~~~~~l~~~cl~~~p~~Rps-~~~i~~~  176 (188)
                      |+|||||++|+|++|..||......             ..+.  ..+..+.+++..|+. +|.+||+ ++++++.
T Consensus       212 DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h  285 (350)
T cd05573         212 DWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH  285 (350)
T ss_pred             eeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence            9999999999999999998643211             1111  236788999999997 9999999 9999873

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.97  E-value=5.4e-31  Score=199.27  Aligned_cols=165  Identities=18%  Similarity=0.184  Sum_probs=131.2

Q ss_pred             CcccccCCCeeeeccc--CCccEEEEecCCCCChhhhc-CCc-c-----------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            5 NRNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQ-GKE-E-----------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~-~~~-~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      .+++++||||+++++.  ....++++||+++++|.+++ ... .           |++.||.|||+   .+++|+|+||+
T Consensus        54 ~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dlkp~  130 (259)
T cd05037          54 LMSQLSHKHLVKLYGVCVRDENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLED---KKLVHGNVCGK  130 (259)
T ss_pred             HHHcCCCcchhheeeEEecCCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhh---CCeecccCccc
Confidence            3578899999999998  66789999999999999998 222 1           99999999999   99999999999


Q ss_pred             cEEEccCC-------ceEEecccCcccccCCCCCcceeeecccccccCCC--------CCCccchHHHHHHHHHHHh-CC
Q 039565           70 NILLNEKV-------QAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE--------LTEKSDVDSFEIVILEIIT-GI  133 (188)
Q Consensus        70 nill~~~~-------~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe--------~~~~~di~s~G~~l~~~~~-g~  133 (188)
                      ||+++.++       .++++|||++.....      .....++..|++||        ++.++|+||||+++|++++ |.
T Consensus       131 Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~  204 (259)
T cd05037         131 NILVARYGLNEGYVPFIKLSDPGIPITVLS------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGE  204 (259)
T ss_pred             eEEEecCccccCCceeEEeCCCCccccccc------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCC
Confidence            99999877       799999998875321      11223445677777        3567999999999999998 46


Q ss_pred             ccccccCCCC----------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHh
Q 039565          134 LTVDLSFKGE----------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVRE  178 (188)
Q Consensus       134 ~p~~~~~~~~----------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~  178 (188)
                      .|+......+          .+......+.+++.+||..+|.+|||+.++++.|+
T Consensus       205 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~  259 (259)
T cd05037         205 EPLSTLSSSEKERFYQDQHRLPMPDCAELANLINQCWTYDPTKRPSFRAILRDLN  259 (259)
T ss_pred             CCcccCCchhHHHHHhcCCCCCCCCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            6664432111          11122368889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.97  E-value=2.4e-31  Score=211.85  Aligned_cols=167  Identities=21%  Similarity=0.251  Sum_probs=133.4

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCcE
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTNI   71 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~ni   71 (188)
                      +..++||||+++++.   +...++||||+++|+|.+++....           |++.||.|||+   .+++||||||+||
T Consensus        97 ~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NI  173 (371)
T cd05622          97 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNM  173 (371)
T ss_pred             HHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHE
Confidence            456789999999988   778999999999999999983222           99999999999   9999999999999


Q ss_pred             EEccCCceEEecccCcccccCCCCCcceeeecccccccCCC----------CCCccchHHHHHHHHHHHhCCccccccCC
Q 039565           72 LLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE----------LTEKSDVDSFEIVILEIITGILTVDLSFK  141 (188)
Q Consensus        72 ll~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe----------~~~~~di~s~G~~l~~~~~g~~p~~~~~~  141 (188)
                      +++.++.+||+|||++...... .........|++.|+|||          ++.++|+|||||++|+|++|..||.....
T Consensus       174 ll~~~~~ikL~DfG~a~~~~~~-~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~  252 (371)
T cd05622         174 LLDKSGHLKLADFGTCMKMNKE-GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL  252 (371)
T ss_pred             EECCCCCEEEEeCCceeEcCcC-CcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCH
Confidence            9999999999999998754311 111223457899999998          45789999999999999999999964321


Q ss_pred             -------------CCcC--HHHHHHHHHHHHHccCcCCCC--CCCHHHHHHH
Q 039565          142 -------------GEFD--IISVEKAVEIAMASVSSKVNR--RPLMNQVVMV  176 (188)
Q Consensus       142 -------------~~~~--~~~~~~~~~l~~~cl~~~p~~--Rps~~~i~~~  176 (188)
                                   ..++  ...+..+.+++..|++..+.+  |++++++++.
T Consensus       253 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h  304 (371)
T cd05622         253 VGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH  304 (371)
T ss_pred             HHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence                         0111  235677889999999854443  7899998874

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=6.1e-31  Score=210.93  Aligned_cols=166  Identities=21%  Similarity=0.205  Sum_probs=132.7

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcC-Cc--c---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQG-KE--E---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~-~~--~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||+++++.   ....+++||++. ++|..++. ..  .         |++.||.|||+   .+|+||||||+|
T Consensus       140 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~---~givHrDlkp~N  215 (392)
T PHA03207        140 LKTISHRAIINLIHAYRWKSTVCMVMPKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHG---RGIIHRDVKTEN  215 (392)
T ss_pred             HHhcCCCCccceeeeEeeCCEEEEEehhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHH
Confidence            678899999999988   778899999997 58888872 22  1         99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCC--
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKG--  142 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~--  142 (188)
                      |+++.++.++|+|||++................|+..|++||      ++.++|+|||||++|+|++|..||......  
T Consensus       216 ill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~  295 (392)
T PHA03207        216 IFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSS  295 (392)
T ss_pred             EEEcCCCCEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCc
Confidence            999999999999999987543222222233467899999999      578899999999999999999887432110  


Q ss_pred             ----------------CcC------------------------------HHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          143 ----------------EFD------------------------------IISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       143 ----------------~~~------------------------------~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                      +++                              ......+.+++..|+..+|++|||+.+++.
T Consensus       296 ~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~  374 (392)
T PHA03207        296 SSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILS  374 (392)
T ss_pred             HHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhh
Confidence                            000                              011345678899999999999999999987

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.97  E-value=3.1e-31  Score=211.87  Aligned_cols=167  Identities=18%  Similarity=0.228  Sum_probs=130.9

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-cc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-EE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||+++++.   .+..+++|||+++|+|.+++.+ ..           |++.||.|||+   .+|+||||||+|
T Consensus        55 l~~l~h~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~---~givHrDlKp~N  131 (381)
T cd05626          55 LAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHK---MGFIHRDIKPDN  131 (381)
T ss_pred             HHhcCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCcHHH
Confidence            567899999999988   7889999999999999999822 21           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCC---------------------------------------------Ccceeeeccc
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGG---------------------------------------------THMSTTIAGT  105 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~  105 (188)
                      |+++.++.++|+|||++........                                             ........|+
T Consensus       132 ili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  211 (381)
T cd05626         132 ILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGT  211 (381)
T ss_pred             EEECCCCCEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCC
Confidence            9999999999999998753210000                                             0001234688


Q ss_pred             ccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCCC-------------cC--HHHHHHHHHHHHH--ccCc
Q 039565          106 AGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKGE-------------FD--IISVEKAVEIAMA--SVSS  162 (188)
Q Consensus       106 ~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~~-------------~~--~~~~~~~~~l~~~--cl~~  162 (188)
                      ..|+|||      ++.++|+|||||++|+|++|..||......+             .+  ...+..+.+++.+  |+..
T Consensus       212 ~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~  291 (381)
T cd05626         212 PNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAE  291 (381)
T ss_pred             ccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcc
Confidence            9999999      5788999999999999999999996432211             11  1235677788877  5566


Q ss_pred             CCCCCCCHHHHHH
Q 039565          163 KVNRRPLMNQVVM  175 (188)
Q Consensus       163 ~p~~Rps~~~i~~  175 (188)
                      ++..||++++++.
T Consensus       292 ~~~~R~~~~~~l~  304 (381)
T cd05626         292 ERLGRNGADDIKA  304 (381)
T ss_pred             cccCCCCHHHHhc
Confidence            6667999999987

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.97  E-value=5.6e-31  Score=204.75  Aligned_cols=165  Identities=22%  Similarity=0.326  Sum_probs=133.2

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||+++++.   ++..++++||+++++|.+++.+..            |++.||.|||+  ..+++|+|++|.|
T Consensus        53 l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~--~~~i~H~dl~p~n  130 (308)
T cd06615          53 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLRE--KHKIMHRDVKPSN  130 (308)
T ss_pred             HHhCCCCCCCeEEEEEeeCCEEEEEeeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh--hCCEEECCCChHH
Confidence            567899999999988   889999999999999999983221            99999999997  1589999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCCCc
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKGEF  144 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~~~  144 (188)
                      |+++.++.++++|||++......    ......++..|++||      ++.++|+||||+++|++++|..||........
T Consensus       131 il~~~~~~~~l~dfg~~~~~~~~----~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~  206 (308)
T cd06615         131 ILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKEL  206 (308)
T ss_pred             EEEecCCcEEEccCCCccccccc----ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhH
Confidence            99999999999999987643211    123346777888998      56789999999999999999988753211000


Q ss_pred             ------------------------------------------------C-HHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          145 ------------------------------------------------D-IISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       145 ------------------------------------------------~-~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                                                      + ......+.+++.+||+.+|++|||+.++++
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~  286 (308)
T cd06615         207 EAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTK  286 (308)
T ss_pred             HHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                                                            0 013456889999999999999999999987


Q ss_pred             H
Q 039565          176 V  176 (188)
Q Consensus       176 ~  176 (188)
                      .
T Consensus       287 ~  287 (308)
T cd06615         287 H  287 (308)
T ss_pred             C
Confidence            5

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.97  E-value=1.3e-30  Score=201.06  Aligned_cols=165  Identities=21%  Similarity=0.223  Sum_probs=133.1

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||+++++.   +...+++|||+++++|..++ +...            |++.|+.|||+   .+++|+|++|+
T Consensus        63 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~  139 (292)
T cd06644          63 LATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHS---MKIIHRDLKAG  139 (292)
T ss_pred             HHhCCCCcEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhc---CCeeecCCCcc
Confidence            567899999999998   78899999999999998877 2211            99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCCC-----------CCccchHHHHHHHHHHHhCCccccc
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTEL-----------TEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~-----------~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      ||+++.++.++|+|||.+.....  .........++..|++||.           +.++|+||||+++|++++|..||..
T Consensus       140 Nili~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~  217 (292)
T cd06644         140 NVLLTLDGDIKLADFGVSAKNVK--TLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHE  217 (292)
T ss_pred             eEEEcCCCCEEEccCccceeccc--cccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCcc
Confidence            99999999999999998764321  1112234557778899982           4579999999999999999998854


Q ss_pred             cCC--------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          139 SFK--------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       139 ~~~--------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ...              ...+...+..+.+++..||+.+|++||+++++++
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  268 (292)
T cd06644         218 LNPMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE  268 (292)
T ss_pred             ccHHHHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence            211              0112234567899999999999999999999986

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.97  E-value=7.8e-31  Score=201.08  Aligned_cols=164  Identities=25%  Similarity=0.313  Sum_probs=133.4

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc--------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE--------VCCPGLEYLHQGLKHPIIQRDMKSTNILLN   74 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~--------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~   74 (188)
                      +.+++||||+++++.   .+..++++||+++++|..+.....        |++.||.|||+   .+++|+|+||+||+++
T Consensus        53 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nill~  129 (279)
T cd06619          53 LYKCDSPYIIGFYGAFFVENRISICTEFMDGGSLDVYRKIPEHVLGRIAVAVVKGLTYLWS---LKILHRDVKPSNMLVN  129 (279)
T ss_pred             HHhCCCCCeeeEEEEEEECCEEEEEEecCCCCChHHhhcCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCCHHHEEEC
Confidence            457899999999998   778899999999999976652222        99999999999   9999999999999999


Q ss_pred             cCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCCC-----
Q 039565           75 EKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKGE-----  143 (188)
Q Consensus        75 ~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~~-----  143 (188)
                      .++.++++|||++.....    .......++..|++||      ++.++|+||||+++|++++|..||.......     
T Consensus       130 ~~~~~~l~dfg~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~  205 (279)
T cd06619         130 TRGQVKLCDFGVSTQLVN----SIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMP  205 (279)
T ss_pred             CCCCEEEeeCCcceeccc----ccccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccch
Confidence            999999999998875321    1223356778899998      5788999999999999999999985422110     


Q ss_pred             --------------c-CHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          144 --------------F-DIISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       144 --------------~-~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                                    . ....+..+.+++..|++.+|++||+++++++.
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~  253 (279)
T cd06619         206 LQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDH  253 (279)
T ss_pred             HHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence                          0 11234578899999999999999999999874

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.97  E-value=7.4e-31  Score=198.19  Aligned_cols=165  Identities=26%  Similarity=0.297  Sum_probs=134.9

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-c-c-----------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-E-E-----------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~-~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +++++||||+++++.   ....++++||+++++|.+++.. . .           |++.|+.|||+   .+++|+|++|.
T Consensus        52 ~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~  128 (256)
T cd06612          52 LKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHS---NKKIHRDIKAG  128 (256)
T ss_pred             HHhCCCCcEeeeeeeeecCCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcc
Confidence            567799999999998   7889999999999999999822 1 1           89999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCC-
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKG-  142 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~-  142 (188)
                      ||+++.++.++++|||++.......  .......++..|++||      ++.++|+||||+++|++++|..||...... 
T Consensus       129 ni~~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~  206 (256)
T cd06612         129 NILLNEEGQAKLADFGVSGQLTDTM--AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMR  206 (256)
T ss_pred             eEEECCCCcEEEcccccchhcccCc--cccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhh
Confidence            9999999999999999887543211  1223345677889998      567899999999999999999988543211 


Q ss_pred             -------------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          143 -------------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       143 -------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                   ..+......+.+++..||+.+|++|||++++++
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~  252 (256)
T cd06612         207 AIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ  252 (256)
T ss_pred             hhhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence                         112234567899999999999999999999986

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.97  E-value=3.5e-31  Score=207.62  Aligned_cols=156  Identities=21%  Similarity=0.313  Sum_probs=128.1

Q ss_pred             cCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEc
Q 039565           10 TGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTNILLN   74 (188)
Q Consensus        10 ~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~   74 (188)
                      +||||++++++   .+..++||||+++|+|..++ ....           |++.||+|||+   .+++||||||+||+++
T Consensus        54 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nili~  130 (327)
T cd05617          54 SNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHE---RGIIYRDLKLDNVLLD  130 (327)
T ss_pred             CCCCEeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEe
Confidence            69999999988   77899999999999999887 2221           99999999999   9999999999999999


Q ss_pred             cCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCC------
Q 039565           75 EKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKG------  142 (188)
Q Consensus        75 ~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~------  142 (188)
                      .++.++|+|||++.....  .........|+..|+|||      ++.++|+||||+++|+|++|..||+.....      
T Consensus       131 ~~~~~kl~Dfg~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~  208 (327)
T cd05617         131 ADGHIKLTDYGMCKEGLG--PGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTE  208 (327)
T ss_pred             CCCCEEEeccccceeccC--CCCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccH
Confidence            999999999998864221  112233467889999999      578999999999999999999999532111      


Q ss_pred             ------------CcCHHHHHHHHHHHHHccCcCCCCCCCH
Q 039565          143 ------------EFDIISVEKAVEIAMASVSSKVNRRPLM  170 (188)
Q Consensus       143 ------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~  170 (188)
                                  ..+...+..+.+++..||+.+|.+|+++
T Consensus       209 ~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~  248 (327)
T cd05617         209 DYLFQVILEKPIRIPRFLSVKASHVLKGFLNKDPKERLGC  248 (327)
T ss_pred             HHHHHHHHhCCCCCCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence                        1223345678899999999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.97  E-value=9.8e-32  Score=210.76  Aligned_cols=165  Identities=18%  Similarity=0.213  Sum_probs=133.5

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc--c-----------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE--E-----------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~--~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +..++||||+++++.   ....++||||+++|+|.+++.+.  .           |++.||.|||+   .+++||||||+
T Consensus        55 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~~i~H~Dlkp~  131 (330)
T cd05601          55 LSISNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQ---MGYVHRDIKPE  131 (330)
T ss_pred             HHhCCCCCCcceeeEEecCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEcccCchH
Confidence            456789999999887   77889999999999999999322  1           99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCCC------------CCccchHHHHHHHHHHHhCCcccc
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTEL------------TEKSDVDSFEIVILEIITGILTVD  137 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~------------~~~~di~s~G~~l~~~~~g~~p~~  137 (188)
                      ||+++.++.+||+|||++...... .........|++.|+|||.            +.++|+||||+++|+|++|..||.
T Consensus       132 NIll~~~~~~kL~Dfg~a~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~  210 (330)
T cd05601         132 NVLIDRTGHIKLADFGSAARLTAN-KMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFH  210 (330)
T ss_pred             heEECCCCCEEeccCCCCeECCCC-CceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCC
Confidence            999999999999999998754321 1112233568889999982            467999999999999999999986


Q ss_pred             ccCC-------------CCcC--HHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          138 LSFK-------------GEFD--IISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       138 ~~~~-------------~~~~--~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ....             ..++  ...+..+.+++..|++ +|.+||+++++++
T Consensus       211 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~  262 (330)
T cd05601         211 EGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC  262 (330)
T ss_pred             CCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence            4321             0111  1346678899999998 9999999999885

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.97  E-value=2.7e-31  Score=211.51  Aligned_cols=165  Identities=17%  Similarity=0.195  Sum_probs=129.7

Q ss_pred             cccccCCCeeeeccc---CC-----ccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeC
Q 039565            6 RNKLTGPLLVELIGK---QK-----NNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRD   65 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~-----~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~d   65 (188)
                      +..++||||++++++   ..     ..++++||+. ++|..++ ....           |++.||.|||+   .+++|||
T Consensus        53 l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~d  128 (372)
T cd07853          53 LCFFKHDNVLSALDILQPPHIDPFEEIYVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHS---AGILHRD  128 (372)
T ss_pred             HHhCCCCCcCCHhheecCCCccccceEEEEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCC
Confidence            467899999999998   33     6799999997 5788777 2222           99999999999   9999999


Q ss_pred             CCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccc
Q 039565           66 MKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        66 l~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      |||+||+++.++.+||+|||++...... .........++..|++||       ++.++|+|||||++|+|++|..||..
T Consensus       129 lkp~Nili~~~~~~kL~Dfg~a~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  207 (372)
T cd07853         129 IKPGNLLVNSNCVLKICDFGLARVEEPD-ESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQA  207 (372)
T ss_pred             CChHHEEECCCCCEEeccccceeecccC-ccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCC
Confidence            9999999999999999999998754311 111222345677899998       46789999999999999999998854


Q ss_pred             cCCC-------------------------------------------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          139 SFKG-------------------------------------------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       139 ~~~~-------------------------------------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ....                                           ......+..+.+++.+|++.||++|||++++++
T Consensus       208 ~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  287 (372)
T cd07853         208 QSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALA  287 (372)
T ss_pred             CCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence            3210                                           001112456789999999999999999999987

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.97  E-value=7.8e-31  Score=199.95  Aligned_cols=164  Identities=25%  Similarity=0.281  Sum_probs=130.9

Q ss_pred             ccc-cCCCeeeeccc---------CCccEEEEecCCCCChhhhcCC-c----c---------cHHHHHHHHhcCCCCCcE
Q 039565            7 NKL-TGPLLVELIGK---------QKNNALELGFRGNPELVDQQGK-E----E---------VCCPGLEYLHQGLKHPII   62 (188)
Q Consensus         7 ~~l-~Hpniv~~~~~---------~~~~~lv~e~~~~~~L~~~~~~-~----~---------~i~~~l~~Lh~~~~~~i~   62 (188)
                      .++ +||||+++.+.         ....++++||+++++|.+++.. .    .         |++.|++|||+   .+++
T Consensus        57 ~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~---~~iv  133 (272)
T cd06637          57 KKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ---HKVI  133 (272)
T ss_pred             HHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCCc
Confidence            345 69999999988         1357899999999999999822 1    1         99999999999   9999


Q ss_pred             EeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-----------CCCccchHHHHHHHHHHHh
Q 039565           63 QRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-----------LTEKSDVDSFEIVILEIIT  131 (188)
Q Consensus        63 h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-----------~~~~~di~s~G~~l~~~~~  131 (188)
                      |+|++|+||+++.++.++++|||++.....  .........|+..|++||           ++.++|+||||+++|++++
T Consensus       134 h~dl~~~nili~~~~~~~l~Dfg~~~~~~~--~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~  211 (272)
T cd06637         134 HRDIKGQNVLLTENAEVKLVDFGVSAQLDR--TVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAE  211 (272)
T ss_pred             cCCCCHHHEEECCCCCEEEccCCCceeccc--ccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHh
Confidence            999999999999999999999999875321  111233456778899988           3457999999999999999


Q ss_pred             CCccccccCC-------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          132 GILTVDLSFK-------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       132 g~~p~~~~~~-------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      |..||+....             .......+..+.+++..||+.+|++|||++++++
T Consensus       212 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  268 (272)
T cd06637         212 GAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK  268 (272)
T ss_pred             CCCCccccCHHHHHHHHhcCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence            9998853211             1111234568899999999999999999999875

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.97  E-value=5.8e-31  Score=204.61  Aligned_cols=169  Identities=20%  Similarity=0.234  Sum_probs=132.8

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc---c---------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE---E---------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~---~---------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||++++++   .+..+++|||+++ +|.+++ ...   .         |++.||.|||+   .+++|||+||+
T Consensus        58 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~dlkp~  133 (309)
T cd07872          58 LKDLKHANIVTLHDIVHTDKSLTLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHR---RKVLHRDLKPQ  133 (309)
T ss_pred             HHhCCCCCcceEEEEEeeCCeEEEEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHH
Confidence            567899999999999   7889999999985 888877 221   1         99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCCC
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFKG  142 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~  142 (188)
                      ||+++.++.++|+|||++.......  .......++..|++||       ++.++|+||||+++|+|++|..||......
T Consensus       134 Nill~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~  211 (309)
T cd07872         134 NLLINERGELKLADFGLARAKSVPT--KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVE  211 (309)
T ss_pred             HEEECCCCCEEECccccceecCCCc--cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH
Confidence            9999999999999999987532111  1122345677899998       467899999999999999999988532210


Q ss_pred             C------------------------------c-----------CHHHHHHHHHHHHHccCcCCCCCCCHHHHHH--HHhh
Q 039565          143 E------------------------------F-----------DIISVEKAVEIAMASVSSKVNRRPLMNQVVM--VREQ  179 (188)
Q Consensus       143 ~------------------------------~-----------~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~--~l~~  179 (188)
                      +                              .           ....+..+.+++..|++.+|.+|||++++++  .++.
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~  291 (309)
T cd07872         212 DELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRS  291 (309)
T ss_pred             HHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhh
Confidence            0                              0           0012456789999999999999999999987  4444


Q ss_pred             c
Q 039565          180 G  180 (188)
Q Consensus       180 ~  180 (188)
                      .
T Consensus       292 ~  292 (309)
T cd07872         292 L  292 (309)
T ss_pred             c
Confidence            3

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=1.6e-30  Score=197.02  Aligned_cols=165  Identities=22%  Similarity=0.251  Sum_probs=133.5

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CC-cc-----------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GK-EE-----------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~-~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +++++||||+++++.   ....+++|||+++++|.+++ .. ..           |++.||.|||+   .+++|+|++|+
T Consensus        54 l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~  130 (262)
T cd06613          54 LKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHE---TGKIHRDIKGA  130 (262)
T ss_pred             HHhCCCCChhceEEEEEeCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHh---CCceecCCChh
Confidence            567899999999988   78899999999999999988 32 22           89999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC---------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE---------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe---------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      ||+++.++.++++|||.+......  ........++..|++||         ++.++|+||||+++|+|++|..||....
T Consensus       131 ni~i~~~~~~~l~d~g~~~~~~~~--~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~  208 (262)
T cd06613         131 NILLTEDGDVKLADFGVSAQLTAT--IAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLH  208 (262)
T ss_pred             hEEECCCCCEEECccccchhhhhh--hhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCC
Confidence            999999999999999988653211  11223345667788888         2346899999999999999999985432


Q ss_pred             C-------------C---CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          141 K-------------G---EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       141 ~-------------~---~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      .             .   ......+..+.+++.+||..+|.+|||+++|+.
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  259 (262)
T cd06613         209 PMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ  259 (262)
T ss_pred             HHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            1             0   112344678899999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.97  E-value=6.6e-31  Score=199.96  Aligned_cols=165  Identities=20%  Similarity=0.250  Sum_probs=132.7

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +..++||||+++++.   .+..++++||+++++|.+++...+            |++.|+.|||+   .+++|+|++|+|
T Consensus        60 ~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~n  136 (267)
T cd06645          60 MKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHS---KGKMHRDIKGAN  136 (267)
T ss_pred             HHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHH
Confidence            456799999999998   788999999999999999882221            89999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC---------CCCccchHHHHHHHHHHHhCCccccccCC
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE---------LTEKSDVDSFEIVILEIITGILTVDLSFK  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe---------~~~~~di~s~G~~l~~~~~g~~p~~~~~~  141 (188)
                      |+++.++.++++|||++.....  .........|+..|++||         ++.++|+||||+++|++++|..||.....
T Consensus       137 ili~~~~~~~l~dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~  214 (267)
T cd06645         137 ILLTDNGHVKLADFGVSAQITA--TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHP  214 (267)
T ss_pred             EEECCCCCEEECcceeeeEccC--cccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccc
Confidence            9999999999999998764421  111223456788899998         34579999999999999999988732111


Q ss_pred             --------------CCc--CHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 --------------GEF--DIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 --------------~~~--~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                    ...  ....+..+.+++..|++.+|++||++++|++
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~  264 (267)
T cd06645         215 MRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ  264 (267)
T ss_pred             hhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence                          000  0123457889999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.97  E-value=7.6e-31  Score=204.47  Aligned_cols=166  Identities=19%  Similarity=0.215  Sum_probs=126.6

Q ss_pred             cccccCCCeeeeccc-----CCccEEEEecCCCCChhhhcC--C----------cc---------cHHHHHHHHhcCCCC
Q 039565            6 RNKLTGPLLVELIGK-----QKNNALELGFRGNPELVDQQG--K----------EE---------VCCPGLEYLHQGLKH   59 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-----~~~~~lv~e~~~~~~L~~~~~--~----------~~---------~i~~~l~~Lh~~~~~   59 (188)
                      +++++||||+++++.     +...++++||+.+ +|..++.  .          ..         |++.||.|||+   .
T Consensus        52 l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~  127 (317)
T cd07868          52 LRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---N  127 (317)
T ss_pred             HHhcCCCCCcceeeeEecCCCcEEEEEEeccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHh---C
Confidence            567899999999887     4567899999974 7777651  1          11         99999999999   9


Q ss_pred             CcEEeCCCCCcEEE----ccCCceEEecccCcccccCCCCC-cceeeecccccccCCC-------CCCccchHHHHHHHH
Q 039565           60 PIIQRDMKSTNILL----NEKVQAKLADFGQSRISPVEGGT-HMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVIL  127 (188)
Q Consensus        60 ~i~h~dl~~~nill----~~~~~~kl~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~  127 (188)
                      +++||||||+||++    +.++.+||+|||+++........ .......++..|+|||       ++.++|+||+||++|
T Consensus       128 ~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~  207 (317)
T cd07868         128 WVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFA  207 (317)
T ss_pred             CEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHH
Confidence            99999999999999    45578999999998764322111 1123456788899999       466799999999999


Q ss_pred             HHHhCCccccccCCCC-----c--------------------------C---H------------------------HHH
Q 039565          128 EIITGILTVDLSFKGE-----F--------------------------D---I------------------------ISV  149 (188)
Q Consensus       128 ~~~~g~~p~~~~~~~~-----~--------------------------~---~------------------------~~~  149 (188)
                      +|++|..||.......     .                          +   .                        ...
T Consensus       208 el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (317)
T cd07868         208 ELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPD  287 (317)
T ss_pred             HHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCC
Confidence            9999999885321100     0                          0   0                        001


Q ss_pred             HHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          150 EKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       150 ~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ..+.+++..|++.||.+|||++++++
T Consensus       288 ~~~~dli~~mL~~dP~~R~t~~e~l~  313 (317)
T cd07868         288 SKAFHLLQKLLTMDPIKRITSEQAMQ  313 (317)
T ss_pred             hHHHHHHHHHhccCcccCCCHHHHhc
Confidence            24678999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.97  E-value=6e-31  Score=208.97  Aligned_cols=164  Identities=18%  Similarity=0.223  Sum_probs=129.1

Q ss_pred             cccccCCCeeeeccc---------CCccEEEEecCCCCChhhhc-CCcc---------cHHHHHHHHhcCCCCCcEEeCC
Q 039565            6 RNKLTGPLLVELIGK---------QKNNALELGFRGNPELVDQQ-GKEE---------VCCPGLEYLHQGLKHPIIQRDM   66 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---------~~~~~lv~e~~~~~~L~~~~-~~~~---------~i~~~l~~Lh~~~~~~i~h~dl   66 (188)
                      ++.++||||++++++         ....++||||+++ +|..++ ....         |++.||.|||+   .+++||||
T Consensus        77 l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dl  152 (364)
T cd07875          77 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDL  152 (364)
T ss_pred             HHhcCCCCccccceeecccccccccCeEEEEEeCCCC-CHHHHHHhcCCHHHHHHHHHHHHHHHHHHhh---CCeecCCC
Confidence            456899999999887         1346999999985 777766 2222         99999999999   99999999


Q ss_pred             CCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           67 KSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        67 ~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      ||+||+++.++.+||+|||+++...   .........++..|+|||      ++.++|+|||||++|+|++|..||....
T Consensus       153 kp~NIll~~~~~~kL~DfG~a~~~~---~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~  229 (364)
T cd07875         153 KPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD  229 (364)
T ss_pred             CHHHEEECCCCcEEEEeCCCccccC---CCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCC
Confidence            9999999999999999999987532   111223356788899998      5789999999999999999999885321


Q ss_pred             CCC-----------------------------------------------------cCHHHHHHHHHHHHHccCcCCCCC
Q 039565          141 KGE-----------------------------------------------------FDIISVEKAVEIAMASVSSKVNRR  167 (188)
Q Consensus       141 ~~~-----------------------------------------------------~~~~~~~~~~~l~~~cl~~~p~~R  167 (188)
                      ..+                                                     ........+.+++.+|++.||.+|
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R  309 (364)
T cd07875         230 HIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR  309 (364)
T ss_pred             HHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccC
Confidence            000                                                     000112467899999999999999


Q ss_pred             CCHHHHHHH
Q 039565          168 PLMNQVVMV  176 (188)
Q Consensus       168 ps~~~i~~~  176 (188)
                      ||++++++.
T Consensus       310 ~t~~e~L~h  318 (364)
T cd07875         310 ISVDEALQH  318 (364)
T ss_pred             CCHHHHhcC
Confidence            999999873

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.97  E-value=1.5e-30  Score=198.45  Aligned_cols=168  Identities=20%  Similarity=0.268  Sum_probs=135.5

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +++++|||++++++.   .+..++++||+++++|.+++.+..            |++.||.|||+   .+++|+|++|+|
T Consensus        62 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~~~n  138 (272)
T cd06629          62 LKDLDHLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHS---KGILHRDLKADN  138 (272)
T ss_pred             HHhcCCCCcceEEEEeccCCceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhh---CCeeecCCChhh
Confidence            667899999999998   788899999999999999983322            89999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC--------CCCccchHHHHHHHHHHHhCCccccccCC-
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE--------LTEKSDVDSFEIVILEIITGILTVDLSFK-  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe--------~~~~~di~s~G~~l~~~~~g~~p~~~~~~-  141 (188)
                      |+++.++.++++|||.+................++..|++||        ++.++|+||||+++|++++|..||..... 
T Consensus       139 il~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~  218 (272)
T cd06629         139 LLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAI  218 (272)
T ss_pred             EEEcCCCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchH
Confidence            999999999999999887543221222233445777888888        36679999999999999999998853211 


Q ss_pred             ----------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          142 ----------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       142 ----------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                                      .......+..+.+++..||..+|.+|||++++++.
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  269 (272)
T cd06629         219 AAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH  269 (272)
T ss_pred             HHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence                            11112335789999999999999999999999863

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.97  E-value=8.2e-31  Score=198.18  Aligned_cols=167  Identities=23%  Similarity=0.330  Sum_probs=137.0

Q ss_pred             CcccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc-c-------------cHHHHHHHHhcCCCCCcEEeCCC
Q 039565            5 NRNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE-E-------------VCCPGLEYLHQGLKHPIIQRDMK   67 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~-~-------------~i~~~l~~Lh~~~~~~i~h~dl~   67 (188)
                      .+++++|+||++++++   ....++++||+++++|.+++.+. .             |++.|+.|||+   .+++|+|++
T Consensus        52 ~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~  128 (256)
T cd08221          52 ILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHK---AGILHRDIK  128 (256)
T ss_pred             HHHhCCCCCeeEEEeEEecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCC
Confidence            3567899999999998   77889999999999999999222 1             89999999999   999999999


Q ss_pred             CCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC
Q 039565           68 STNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK  141 (188)
Q Consensus        68 ~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~  141 (188)
                      |+||+++.++.+|++|||.+.......  .......++..|.+||      .+.++|+||||+++|++++|..||+....
T Consensus       129 p~ni~~~~~~~~kl~d~~~~~~~~~~~--~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~  206 (256)
T cd08221         129 TLNIFLTKAGLIKLGDFGISKILGSEY--SMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP  206 (256)
T ss_pred             hHhEEEeCCCCEEECcCcceEEccccc--ccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH
Confidence            999999999999999999887543222  1233456778899998      46789999999999999999998865322


Q ss_pred             CC------------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          142 GE------------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       142 ~~------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                      .+            .+...+..+.+++.+||+.+|.+||+++++++.
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~  253 (256)
T cd08221         207 LNLVVKIVQGNYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ  253 (256)
T ss_pred             HHHHHHHHcCCCCCCccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence            11            122345678999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=2.2e-31  Score=202.47  Aligned_cols=166  Identities=20%  Similarity=0.236  Sum_probs=133.8

Q ss_pred             cccccCCCeeeeccc--------CCccEEEEecCCCCChhhhcCCc---c---------cHHHHHHHHhcCCCCCcEEeC
Q 039565            6 RNKLTGPLLVELIGK--------QKNNALELGFRGNPELVDQQGKE---E---------VCCPGLEYLHQGLKHPIIQRD   65 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--------~~~~~lv~e~~~~~~L~~~~~~~---~---------~i~~~l~~Lh~~~~~~i~h~d   65 (188)
                      |.+++|+||+.+.++        -+..|+|+|+|+ .+|...++..   .         |++.||.|+|+   .+|+|||
T Consensus        75 Lr~~~HeNIi~l~di~~p~~~~~f~DvYiV~elMe-tDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHS---AnViHRD  150 (359)
T KOG0660|consen   75 LRHLRHENIIGLLDIFRPPSRDKFNDVYLVFELME-TDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHS---ANVIHRD  150 (359)
T ss_pred             HHHhcCCCcceEEeecccccccccceeEEehhHHh-hHHHHHHHcCccccHHHHHHHHHHHHHhcchhhc---ccccccc
Confidence            567889999999999        356799999996 5999999322   2         99999999999   9999999


Q ss_pred             CCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccc
Q 039565           66 MKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        66 l~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      |||.|++++.+..+|++|||+++...........+....|.+|.|||       ++.+.||||.||++.||++|+..|..
T Consensus       151 LKPsNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG  230 (359)
T KOG0660|consen  151 LKPSNLLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPG  230 (359)
T ss_pred             cchhheeeccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCC
Confidence            99999999999999999999999754222233345678889999999       79999999999999999999976632


Q ss_pred             cCC--------------CC-------------------------cC---HHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          139 SFK--------------GE-------------------------FD---IISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       139 ~~~--------------~~-------------------------~~---~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ...              .+                         +.   ........+++..+|..||.+|+|++|.++
T Consensus       231 ~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~  309 (359)
T KOG0660|consen  231 KDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA  309 (359)
T ss_pred             CchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence            110              00                         00   012235679999999999999999999887

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.97  E-value=1.3e-30  Score=199.13  Aligned_cols=169  Identities=18%  Similarity=0.175  Sum_probs=134.0

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc-----------c---------cHHHHHHHHhcCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE-----------E---------VCCPGLEYLHQGLKHPI   61 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~-----------~---------~i~~~l~~Lh~~~~~~i   61 (188)
                      +.+++||||++++++   ....+++|||+++++|.+++ ...           .         |++.||.|||+   .++
T Consensus        62 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~---~~i  138 (275)
T cd05046          62 FRKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSN---ARF  138 (275)
T ss_pred             HHhcCCcceeeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhh---cCc
Confidence            567899999999998   67889999999999999998 222           1         99999999999   999


Q ss_pred             EEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCc
Q 039565           62 IQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GIL  134 (188)
Q Consensus        62 ~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~  134 (188)
                      +|+|+||+||+++.++.++++|||++...... .........++..|++||      .+.++|+||||+++|++++ |..
T Consensus       139 ~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~  217 (275)
T cd05046         139 VHRDLAARNCLVSSQREVKVSLLSLSKDVYNS-EYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGEL  217 (275)
T ss_pred             ccCcCccceEEEeCCCcEEEcccccccccCcc-cccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            99999999999999999999999987643211 111112223455688888      4677999999999999998 777


Q ss_pred             cccccCC-------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHh
Q 039565          135 TVDLSFK-------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVRE  178 (188)
Q Consensus       135 p~~~~~~-------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~  178 (188)
                      ||.....             ...+...+..+.+++.+||+.+|.+||++.++++.|.
T Consensus       218 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         218 PFYGLSDEEVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             CccccchHHHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence            7743211             1122334568999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.97  E-value=3.4e-31  Score=215.18  Aligned_cols=169  Identities=18%  Similarity=0.184  Sum_probs=129.1

Q ss_pred             cccccCCCeeeeccc-----------CCccEEEEecCCCCChhhhcC----Ccc------------cHHHHHHHHhcCCC
Q 039565            6 RNKLTGPLLVELIGK-----------QKNNALELGFRGNPELVDQQG----KEE------------VCCPGLEYLHQGLK   58 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-----------~~~~~lv~e~~~~~~L~~~~~----~~~------------~i~~~l~~Lh~~~~   58 (188)
                      |.+++||||+++.++           ....+++|||+++ +|..++.    ...            |++.||.|||+   
T Consensus       113 l~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~---  188 (440)
T PTZ00036        113 MKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHS---  188 (440)
T ss_pred             HHhcCCCCCcceeeeEeecccccCCCceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH---
Confidence            567899999998765           1236689999985 6766651    111            89999999999   


Q ss_pred             CCcEEeCCCCCcEEEccCC-ceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHH
Q 039565           59 HPIIQRDMKSTNILLNEKV-QAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEII  130 (188)
Q Consensus        59 ~~i~h~dl~~~nill~~~~-~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~  130 (188)
                      .+|+||||||+||+++.++ .+||+|||+++.....   .......|++.|+|||       ++.++|+|||||++|+|+
T Consensus       189 ~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell  265 (440)
T PTZ00036        189 KFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAG---QRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMI  265 (440)
T ss_pred             CCEecCCcCHHHEEEcCCCCceeeeccccchhccCC---CCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHH
Confidence            9999999999999999765 6999999999754311   1223456788899999       467799999999999999


Q ss_pred             hCCccccccCCCC----------------------------------------cCHHHHHHHHHHHHHccCcCCCCCCCH
Q 039565          131 TGILTVDLSFKGE----------------------------------------FDIISVEKAVEIAMASVSSKVNRRPLM  170 (188)
Q Consensus       131 ~g~~p~~~~~~~~----------------------------------------~~~~~~~~~~~l~~~cl~~~p~~Rps~  170 (188)
                      +|..||......+                                        ++...+..+.+++.+||+.+|.+|||+
T Consensus       266 tG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta  345 (440)
T PTZ00036        266 LGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNP  345 (440)
T ss_pred             hCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCH
Confidence            9999985432100                                        011123578899999999999999999


Q ss_pred             HHHHH--HHhhcc
Q 039565          171 NQVVM--VREQGS  181 (188)
Q Consensus       171 ~~i~~--~l~~~~  181 (188)
                      .++++  .++.+.
T Consensus       346 ~e~l~hp~f~~~~  358 (440)
T PTZ00036        346 IEALADPFFDDLR  358 (440)
T ss_pred             HHHhCChhHHhhh
Confidence            99985  444443

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.97  E-value=6.3e-31  Score=202.11  Aligned_cols=163  Identities=21%  Similarity=0.235  Sum_probs=128.2

Q ss_pred             cccccCCCeeeeccc--------CCccEEEEecCCCCChhhhcCC-c----c---------cHHHHHHHHhcCCCCCcEE
Q 039565            6 RNKLTGPLLVELIGK--------QKNNALELGFRGNPELVDQQGK-E----E---------VCCPGLEYLHQGLKHPIIQ   63 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--------~~~~~lv~e~~~~~~L~~~~~~-~----~---------~i~~~l~~Lh~~~~~~i~h   63 (188)
                      +.+++||||++++++        ....++++||+++ +|.+++.. .    .         |++.||.|||+   .+++|
T Consensus        56 l~~~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH  131 (288)
T cd07863          56 LEAFDHPNIVRLMDVCATSRTDRETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHA---NCIVH  131 (288)
T ss_pred             hhhcCCCCeeeeeeeeccccCCCCceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeec
Confidence            445689999999987        2347899999984 88888722 1    1         99999999999   99999


Q ss_pred             eCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCcccc
Q 039565           64 RDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVD  137 (188)
Q Consensus        64 ~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~  137 (188)
                      +|+||+||+++.++.++|+|||++.....   ........++..|++||      ++.++|+||+||++|++++|..||.
T Consensus       132 ~dikp~Nili~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~  208 (288)
T cd07863         132 RDLKPENILVTSGGQVKLADFGLARIYSC---QMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFC  208 (288)
T ss_pred             CCCCHHHEEECCCCCEEECccCccccccC---cccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcC
Confidence            99999999999999999999999875431   11122345678899999      5788999999999999999998874


Q ss_pred             ccCCC----------------C----------------------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          138 LSFKG----------------E----------------------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       138 ~~~~~----------------~----------------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      .....                .                      ........+.+++..|++.||++|||+.+++.
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~  284 (288)
T cd07863         209 GNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ  284 (288)
T ss_pred             CCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            32110                0                      00123456789999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.97  E-value=3.5e-31  Score=207.25  Aligned_cols=159  Identities=21%  Similarity=0.304  Sum_probs=127.8

Q ss_pred             ccccCC-Ceeeeccc---CCccEEEEecCCCCChhhhcCC-c--c---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            7 NKLTGP-LLVELIGK---QKNNALELGFRGNPELVDQQGK-E--E---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         7 ~~l~Hp-niv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~--~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      ..++|+ +|++++++   .+..++||||+++|+|..++.+ .  .         |++.||.|||+   .+++||||||+|
T Consensus        55 ~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~N  131 (324)
T cd05587          55 ALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDN  131 (324)
T ss_pred             HhcCCCCceeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHH
Confidence            345554 57788776   7789999999999999998822 1  1         99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC---
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK---  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~---  141 (188)
                      |+++.++.++|+|||++.....  .........|+..|++||      ++.++|+||+||++|+|++|..||+....   
T Consensus       132 ill~~~~~~kL~Dfg~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~  209 (324)
T cd05587         132 VMLDAEGHIKIADFGMCKENIF--GGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDEL  209 (324)
T ss_pred             eEEcCCCCEEEeecCcceecCC--CCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH
Confidence            9999999999999998764221  112233457889999999      57789999999999999999999964321   


Q ss_pred             --------CCcCHHHHHHHHHHHHHccCcCCCCCCCH
Q 039565          142 --------GEFDIISVEKAVEIAMASVSSKVNRRPLM  170 (188)
Q Consensus       142 --------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  170 (188)
                              ..++...+..+.+++..||..+|.+|++.
T Consensus       210 ~~~i~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~  246 (324)
T cd05587         210 FQSIMEHNVSYPKSLSKEAVSICKGLLTKHPAKRLGC  246 (324)
T ss_pred             HHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence                    12233456678899999999999999975

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.97  E-value=2.5e-31  Score=200.67  Aligned_cols=164  Identities=20%  Similarity=0.191  Sum_probs=132.9

Q ss_pred             cccccCCCeeeeccc-----CCccEEEEecCCCCChhhhcCCcc-------------cHHHHHHHHhcCCCCCcEEeCCC
Q 039565            6 RNKLTGPLLVELIGK-----QKNNALELGFRGNPELVDQQGKEE-------------VCCPGLEYLHQGLKHPIIQRDMK   67 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~-------------~i~~~l~~Lh~~~~~~i~h~dl~   67 (188)
                      |.+++|||||.+.++     -+..++|||||+. +|.+.+++.+             |+++|++|||+   ..|+|||||
T Consensus       129 Ll~~~H~NIV~vkEVVvG~~~d~iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~---~wilHRDLK  204 (419)
T KOG0663|consen  129 LLKARHPNIVEVKEVVVGSNMDKIYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHD---NWILHRDLK  204 (419)
T ss_pred             HHhcCCCCeeeeEEEEeccccceeeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhh---ceeEecccc
Confidence            567899999999888     5678999999996 8988883222             99999999999   999999999


Q ss_pred             CCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           68 STNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        68 ~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      ++|+|++..|.+|++|||+++.+..+.  ...+....|.+|.|||       +++..|+||+||++.|++.+.+.|....
T Consensus       205 ~SNLLm~~~G~lKiaDFGLAR~ygsp~--k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~s  282 (419)
T KOG0663|consen  205 TSNLLLSHKGILKIADFGLAREYGSPL--KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKS  282 (419)
T ss_pred             hhheeeccCCcEEecccchhhhhcCCc--ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCc
Confidence            999999999999999999999765332  2344567788899998       7999999999999999999986442100


Q ss_pred             -------------------C-----------------------CCcCHH-HHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          141 -------------------K-----------------------GEFDII-SVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       141 -------------------~-----------------------~~~~~~-~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                         +                       ..+... ..+.-.+++...+..||.+|-|+++.++
T Consensus       283 E~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~  360 (419)
T KOG0663|consen  283 EIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK  360 (419)
T ss_pred             hHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence                               0                       001111 3356789999999999999999999875

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=1.1e-30  Score=200.19  Aligned_cols=166  Identities=22%  Similarity=0.226  Sum_probs=134.8

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-c---c---------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-E---E---------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~---~---------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||+++++.   +...+++|||+++++|..++.. .   .         |++.||.|||+   .+++|+|++|+
T Consensus        56 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~  132 (280)
T cd06611          56 LSECKHPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHS---HKVIHRDLKAG  132 (280)
T ss_pred             HHhCCCCceeEEEEEEecCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChh
Confidence            567899999999998   7888999999999999999822 1   1         99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-----------CCCccchHHHHHHHHHHHhCCccccc
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-----------LTEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-----------~~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      ||+++.++.++++|||++......  ........++..|++||           ++.++|+||||+++|++++|..||..
T Consensus       133 nili~~~~~~~l~d~g~~~~~~~~--~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~  210 (280)
T cd06611         133 NILLTLDGDVKLADFGVSAKNKST--LQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHE  210 (280)
T ss_pred             hEEECCCCCEEEccCccchhhccc--ccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCccc
Confidence            999999999999999987643211  11223456777888888           24579999999999999999999864


Q ss_pred             cCC--------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          139 SFK--------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       139 ~~~--------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                      ...              ...+...+..+.+++..||+.+|.+||+++++++.
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  262 (280)
T cd06611         211 LNPMRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH  262 (280)
T ss_pred             CCHHHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence            321              01122345688999999999999999999999873

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.97  E-value=1.8e-30  Score=197.76  Aligned_cols=165  Identities=21%  Similarity=0.255  Sum_probs=133.7

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CC---c--c---------cHHHHHHHHhcCCCCCcEEeCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GK---E--E---------VCCPGLEYLHQGLKHPIIQRDMK   67 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~---~--~---------~i~~~l~~Lh~~~~~~i~h~dl~   67 (188)
                      +.+++||||++++++   ++..++++||+++++|.+++ ..   .  .         |++.||+|||+   .+++|+|++
T Consensus        59 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~h~dl~  135 (268)
T cd06624          59 HSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHD---NQIVHRDIK  135 (268)
T ss_pred             HHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHH---CCEeecCCC
Confidence            467899999999998   77889999999999999998 22   1  1         89999999999   999999999


Q ss_pred             CCcEEEcc-CCceEEecccCcccccCCCCCcceeeecccccccCCC--------CCCccchHHHHHHHHHHHhCCccccc
Q 039565           68 STNILLNE-KVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE--------LTEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        68 ~~nill~~-~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe--------~~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      |.||+++. ++.++++|||.+.....  .........++..|++||        ++.++|+||||+++|++++|..||..
T Consensus       136 p~nil~~~~~~~~~l~dfg~~~~~~~--~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~  213 (268)
T cd06624         136 GDNVLVNTYSGVVKISDFGTSKRLAG--INPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIE  213 (268)
T ss_pred             HHHEEEcCCCCeEEEecchhheeccc--CCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCcc
Confidence            99999976 67899999998865321  111222345777899998        45789999999999999999998853


Q ss_pred             cCC--------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          139 SFK--------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       139 ~~~--------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ...              ...+......+.+++.+||+.+|++|||+.++++
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  264 (268)
T cd06624         214 LGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ  264 (268)
T ss_pred             ccChhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence            211              1223345568899999999999999999999876

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.97  E-value=1.2e-30  Score=201.81  Aligned_cols=165  Identities=22%  Similarity=0.291  Sum_probs=134.9

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc--c---------cHHHHHHHHhcCCCCCcEEeCCCCCcE
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE--E---------VCCPGLEYLHQGLKHPIIQRDMKSTNI   71 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~--~---------~i~~~l~~Lh~~~~~~i~h~dl~~~ni   71 (188)
                      ++.++||||+++++.   .+..++++||+++++|..++...  .         |++.|++|||+   .+++|+|++|+||
T Consensus        70 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~---~~i~H~dL~p~Ni  146 (296)
T cd06655          70 MKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHA---NQVIHRDIKSDNV  146 (296)
T ss_pred             HHhcCCCceeeeeeeEecCceEEEEEEecCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHE
Confidence            467899999999998   78899999999999999988322  2         89999999999   9999999999999


Q ss_pred             EEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCC---
Q 039565           72 LLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKG---  142 (188)
Q Consensus        72 ll~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~---  142 (188)
                      +++.++.++++|||++.......  .......++..|++||      ++.++|+||||+++|++++|..||......   
T Consensus       147 li~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~  224 (296)
T cd06655         147 LLGMDGSVKLTDFGFCAQITPEQ--SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL  224 (296)
T ss_pred             EECCCCCEEEccCccchhccccc--ccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            99999999999999876532111  1122345777899999      567899999999999999999998643210   


Q ss_pred             -----------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          143 -----------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       143 -----------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                 ..+...+..+.+++.+||..+|++||+++++++
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~  268 (296)
T cd06655         225 YLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ  268 (296)
T ss_pred             HHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence                       112234567889999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.97  E-value=3.3e-31  Score=207.32  Aligned_cols=156  Identities=21%  Similarity=0.299  Sum_probs=128.7

Q ss_pred             cCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-cc-----------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEc
Q 039565           10 TGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-EE-----------VCCPGLEYLHQGLKHPIIQRDMKSTNILLN   74 (188)
Q Consensus        10 ~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~   74 (188)
                      +||+|+++.++   .+..++||||+++|+|..++.+ ..           |++.||+|||+   .+++||||||+||+++
T Consensus        59 ~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~  135 (323)
T cd05616          59 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLD  135 (323)
T ss_pred             CCCeEeeEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCEEecCCCHHHeEEC
Confidence            68999999887   7788999999999999988822 21           99999999999   9999999999999999


Q ss_pred             cCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC-------
Q 039565           75 EKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK-------  141 (188)
Q Consensus        75 ~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~-------  141 (188)
                      .++.+||+|||+++....  .........|++.|+|||      ++.++|+|||||++|+|++|..||.....       
T Consensus       136 ~~~~~kL~DfG~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i  213 (323)
T cd05616         136 SEGHIKIADFGMCKENMW--DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI  213 (323)
T ss_pred             CCCcEEEccCCCceecCC--CCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            999999999999864321  111233456889999999      57899999999999999999999965321       


Q ss_pred             ----CCcCHHHHHHHHHHHHHccCcCCCCCCCH
Q 039565          142 ----GEFDIISVEKAVEIAMASVSSKVNRRPLM  170 (188)
Q Consensus       142 ----~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  170 (188)
                          ..++...+..+.+++..|++.+|++|++.
T Consensus       214 ~~~~~~~p~~~s~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05616         214 MEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGC  246 (323)
T ss_pred             HhCCCCCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence                11233456788999999999999999984

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.97  E-value=1.9e-31  Score=213.36  Aligned_cols=173  Identities=19%  Similarity=0.245  Sum_probs=141.2

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc--c------------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE--E------------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~--~------------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      |.+++||||++++|+   ++.+++|+||+++|+|.+|+...  +            |+++||+||.+   .+++|||+.+
T Consensus       589 LsqLkhPNIveLvGVC~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes---~nfVHrd~a~  665 (807)
T KOG1094|consen  589 LSRLKHPNIVELLGVCVQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLES---LNFVHRDLAT  665 (807)
T ss_pred             HhccCCCCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHh---hchhhccccc
Confidence            678999999999999   99999999999999999999222  2            99999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh--CCccccccC
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT--GILTVDLSF  140 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~--g~~p~~~~~  140 (188)
                      .|+|+++++.+|++|||.++..-........-...-+..|||+|      ++.++|+|+||+++||+++  ...||.+-.
T Consensus       666 rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt  745 (807)
T KOG1094|consen  666 RNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLT  745 (807)
T ss_pred             cceeecCcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhh
Confidence            99999999999999999988432222222222234445788888      8999999999999999864  345663211


Q ss_pred             C-------------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhcc
Q 039565          141 K-------------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGS  181 (188)
Q Consensus       141 ~-------------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~  181 (188)
                      .                   ...+..++.++.+++..||+.+..+||+++++...|.+..
T Consensus       746 ~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~~  805 (807)
T KOG1094|consen  746 DEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQEDA  805 (807)
T ss_pred             HHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHhc
Confidence            1                   1245567889999999999999999999999999887654

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.97  E-value=7.9e-31  Score=204.20  Aligned_cols=166  Identities=18%  Similarity=0.218  Sum_probs=126.3

Q ss_pred             cccccCCCeeeeccc-----CCccEEEEecCCCCChhhhcC--C----------cc---------cHHHHHHHHhcCCCC
Q 039565            6 RNKLTGPLLVELIGK-----QKNNALELGFRGNPELVDQQG--K----------EE---------VCCPGLEYLHQGLKH   59 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-----~~~~~lv~e~~~~~~L~~~~~--~----------~~---------~i~~~l~~Lh~~~~~   59 (188)
                      +++++||||++++++     +...++++||+.+ +|.+++.  .          ..         |++.||.|||+   .
T Consensus        52 l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~  127 (317)
T cd07867          52 LRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHA---N  127 (317)
T ss_pred             HHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHh---C
Confidence            567899999999887     5677899999985 6666651  0          01         99999999999   9


Q ss_pred             CcEEeCCCCCcEEE----ccCCceEEecccCcccccCCCCC-cceeeecccccccCCC-------CCCccchHHHHHHHH
Q 039565           60 PIIQRDMKSTNILL----NEKVQAKLADFGQSRISPVEGGT-HMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVIL  127 (188)
Q Consensus        60 ~i~h~dl~~~nill----~~~~~~kl~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~  127 (188)
                      +++|||+||+||++    +.++.+||+|||+++........ .......++..|+|||       ++.++|+||||+++|
T Consensus       128 ~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~  207 (317)
T cd07867         128 WVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFA  207 (317)
T ss_pred             CEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHH
Confidence            99999999999999    45678999999998754322111 1123456788899999       367799999999999


Q ss_pred             HHHhCCccccccCCCC----------------------------------cC------------------------HHHH
Q 039565          128 EIITGILTVDLSFKGE----------------------------------FD------------------------IISV  149 (188)
Q Consensus       128 ~~~~g~~p~~~~~~~~----------------------------------~~------------------------~~~~  149 (188)
                      +|++|..||.......                                  ++                        ....
T Consensus       208 el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (317)
T cd07867         208 ELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPD  287 (317)
T ss_pred             HHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCC
Confidence            9999999885321100                                  00                        0012


Q ss_pred             HHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          150 EKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       150 ~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ..+.+++..|++.||.+|||++|+++
T Consensus       288 ~~~~~ll~~~l~~dP~~R~t~~e~l~  313 (317)
T cd07867         288 SKVFLLLQKLLTMDPTKRITSEQALQ  313 (317)
T ss_pred             hHHHHHHHHHhccCcccccCHHHHhc
Confidence            34678999999999999999999985

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=2.7e-31  Score=210.84  Aligned_cols=166  Identities=19%  Similarity=0.281  Sum_probs=132.0

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +..++||||+++++.   ....++||||+++|+|.+++ ....           |++.||+|||+   .+++||||||+|
T Consensus        55 l~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~N  131 (364)
T cd05599          55 LAEADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHK---LGYIHRDIKPDN  131 (364)
T ss_pred             HHhCCCCCCcceEEEEEcCCeEEEEECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHH
Confidence            567889999999988   78899999999999999998 3222           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCc------------------------------------ceeeecccccccCCC--
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTH------------------------------------MSTTIAGTAGFLNTE--  112 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~------------------------------------~~~~~~~~~~~~~pe--  112 (188)
                      |+++.++.++++|||++..........                                    ......|++.|+|||  
T Consensus       132 Il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  211 (364)
T cd05599         132 LLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVF  211 (364)
T ss_pred             eEECCCCCEEEeecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHH
Confidence            999999999999999886432111000                                    011235889999999  


Q ss_pred             ----CCCccchHHHHHHHHHHHhCCccccccCCC-------------Cc--CHHHHHHHHHHHHHccCcCCCCCCC---H
Q 039565          113 ----LTEKSDVDSFEIVILEIITGILTVDLSFKG-------------EF--DIISVEKAVEIAMASVSSKVNRRPL---M  170 (188)
Q Consensus       113 ----~~~~~di~s~G~~l~~~~~g~~p~~~~~~~-------------~~--~~~~~~~~~~l~~~cl~~~p~~Rps---~  170 (188)
                          ++.++|+|||||++|+|++|..||......             ..  ....+..+.+++..|+. +|.+|++   +
T Consensus       212 ~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~  290 (364)
T cd05599         212 LQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGV  290 (364)
T ss_pred             cCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCH
Confidence                578899999999999999999998643210             01  11235678899999986 8999998   8


Q ss_pred             HHHHH
Q 039565          171 NQVVM  175 (188)
Q Consensus       171 ~~i~~  175 (188)
                      +++++
T Consensus       291 ~~ll~  295 (364)
T cd05599         291 NEIKS  295 (364)
T ss_pred             HHHhc
Confidence            88876

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=1.4e-30  Score=198.99  Aligned_cols=165  Identities=24%  Similarity=0.312  Sum_probs=136.2

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc--c---------cHHHHHHHHhcCCCCCcEEeCCCCCcE
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE--E---------VCCPGLEYLHQGLKHPIIQRDMKSTNI   71 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~--~---------~i~~~l~~Lh~~~~~~i~h~dl~~~ni   71 (188)
                      +++++||||+++.+.   +...++++||+++++|.+++...  .         |++.|+.|||+   .+++|+|++|+||
T Consensus        53 l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni  129 (274)
T cd06609          53 LSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHE---EGKIHRDIKAANI  129 (274)
T ss_pred             HHHcCCCCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHE
Confidence            467889999999998   78889999999999999999332  2         99999999999   9999999999999


Q ss_pred             EEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC----
Q 039565           72 LLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK----  141 (188)
Q Consensus        72 ll~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~----  141 (188)
                      +++.++.++++|||++.......  .......++..|++||      ++.++|+||||+++|++++|..||+....    
T Consensus       130 ~i~~~~~~~l~d~g~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~  207 (274)
T cd06609         130 LLSEEGDVKLADFGVSGQLTSTM--SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVL  207 (274)
T ss_pred             EECCCCCEEEcccccceeecccc--cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHH
Confidence            99999999999999987643221  1233456777899999      47889999999999999999999864221    


Q ss_pred             --------CCcCHH-HHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 --------GEFDII-SVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 --------~~~~~~-~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                              ...... .+..+.+++..||..+|++|||++++++
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~  250 (274)
T cd06609         208 FLIPKNNPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLK  250 (274)
T ss_pred             HHhhhcCCCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence                    111112 5567899999999999999999999987

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.97  E-value=1.2e-30  Score=199.04  Aligned_cols=173  Identities=24%  Similarity=0.244  Sum_probs=133.7

Q ss_pred             CcccccCCCeeeeccc---C------CccEEEEecCCCCChhhhc--CC---c----c---------cHHHHHHHHhcCC
Q 039565            5 NRNKLTGPLLVELIGK---Q------KNNALELGFRGNPELVDQQ--GK---E----E---------VCCPGLEYLHQGL   57 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~---~------~~~~lv~e~~~~~~L~~~~--~~---~----~---------~i~~~l~~Lh~~~   57 (188)
                      .+++++||||+++++.   .      ...+++++|+.+|+|..++  ..   .    .         |++.||+|||+  
T Consensus        54 ~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~--  131 (273)
T cd05074          54 CMKEFDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSS--  131 (273)
T ss_pred             HHhcCCCCCcceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHh--
Confidence            3677899999999997   1      1236889999999998876  11   0    1         99999999999  


Q ss_pred             CCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh
Q 039565           58 KHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT  131 (188)
Q Consensus        58 ~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~  131 (188)
                       .+++|+|+||+||+++.++.++++|||.++...............++..|++||      ++.++|+||||+++|++++
T Consensus       132 -~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~  210 (273)
T cd05074         132 -KNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMT  210 (273)
T ss_pred             -CCEeecccchhhEEEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhh
Confidence             999999999999999999999999999887543211111122233445677787      4788999999999999998


Q ss_pred             -CCccccccCC------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhc
Q 039565          132 -GILTVDLSFK------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQG  180 (188)
Q Consensus       132 -g~~p~~~~~~------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~  180 (188)
                       |..||.....            ...+...+..+.+++.+||+.+|++|||+.++++.|+++
T Consensus       211 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         211 RGQTPYAGVENSEIYNYLIKGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             CCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence             7777743221            111223457899999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.97  E-value=2.3e-30  Score=195.70  Aligned_cols=165  Identities=21%  Similarity=0.300  Sum_probs=134.6

Q ss_pred             cccccCCCeeeeccc----CCccEEEEecCCCCChhhhc-CC-c---c---------cHHHHHHHHhcCCCCCcEEeCCC
Q 039565            6 RNKLTGPLLVELIGK----QKNNALELGFRGNPELVDQQ-GK-E---E---------VCCPGLEYLHQGLKHPIIQRDMK   67 (188)
Q Consensus         6 l~~l~Hpniv~~~~~----~~~~~lv~e~~~~~~L~~~~-~~-~---~---------~i~~~l~~Lh~~~~~~i~h~dl~   67 (188)
                      +++++|||++++.+.    ....++++||+++++|.+++ .. .   .         +++.|++|||+   .+++|+|++
T Consensus        53 l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~---~~i~H~di~  129 (257)
T cd08223          53 LSQLKHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHE---KHILHRDLK  129 (257)
T ss_pred             HHhCCCCCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCC
Confidence            567899999999877    33578999999999999988 21 1   1         89999999999   999999999


Q ss_pred             CCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC
Q 039565           68 STNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK  141 (188)
Q Consensus        68 ~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~  141 (188)
                      |+||+++.++.++++|||++......  ........++..|++||      .+.++|+||||++++++++|..||+....
T Consensus       130 p~nil~~~~~~~~l~df~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~  207 (257)
T cd08223         130 TQNVFLTRTNIIKVGDLGIARVLENQ--CDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM  207 (257)
T ss_pred             chhEEEecCCcEEEecccceEEeccc--CCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH
Confidence            99999999999999999998754321  12233456778899999      46789999999999999999988864321


Q ss_pred             ------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 ------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 ------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                  ...+...+..+.+++..|++.+|++||++.++++
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  253 (257)
T cd08223         208 NSLVYRIIEGKLPPMPKDYSPELGELIATMLSKRPEKRPSVKSILR  253 (257)
T ss_pred             HHHHHHHHhcCCCCCccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence                        1233345678999999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.97  E-value=1.2e-30  Score=198.39  Aligned_cols=167  Identities=21%  Similarity=0.294  Sum_probs=135.8

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-cc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-EE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +++++|+||+++.++   ....++++||+++++|.+++.+ ..           |++.||+|||+   .+++|+|++|.|
T Consensus        56 l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~n  132 (265)
T cd06631          56 LKSLKHVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHN---NCVVHRDIKGNN  132 (265)
T ss_pred             HHhcCCCCEeeEeeEeecCCeEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHh
Confidence            567899999999998   7788999999999999999822 22           89999999999   899999999999


Q ss_pred             EEEccCCceEEecccCcccccCCC----CCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEG----GTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~----~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      |+++.++.++++|||.+.......    .........++..|++||      ++.++|+||||+++|++++|..||....
T Consensus       133 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~  212 (265)
T cd06631         133 VMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMD  212 (265)
T ss_pred             EEECCCCeEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCC
Confidence            999999999999999876432111    111122356778899999      4688999999999999999999985321


Q ss_pred             --------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          141 --------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       141 --------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                    ..+.+...+..+.+++..||+.+|.+||++.++++
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~  261 (265)
T cd06631         213 RLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR  261 (265)
T ss_pred             hHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence                          11233345678899999999999999999999875

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.97  E-value=5.4e-31  Score=191.93  Aligned_cols=163  Identities=21%  Similarity=0.297  Sum_probs=135.0

Q ss_pred             ccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCcE
Q 039565            7 NKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTNI   71 (188)
Q Consensus         7 ~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~ni   71 (188)
                      ..++||||+++...   ...+++|+|+++|+.|-.=+ ++.-           |++.||.|+|.   .+|+|||+||+|+
T Consensus        65 ~~LqHP~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~---n~IvHRDvkP~nl  141 (355)
T KOG0033|consen   65 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHS---NGIVHRDLKPENL  141 (355)
T ss_pred             HhcCCCcEeehhhhhcccceeEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCceeccCChhhe
Confidence            35899999999888   77889999999999886555 3321           99999999999   9999999999999


Q ss_pred             EEcc---CCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCC
Q 039565           72 LLNE---KVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKG  142 (188)
Q Consensus        72 ll~~---~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~  142 (188)
                      ++.+   ...+|++|||++....   .......+.|+|.|++||      ++..+|||+.|+++|-++.|.+||......
T Consensus       142 lLASK~~~A~vKL~~FGvAi~l~---~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~  218 (355)
T KOG0033|consen  142 LLASKAKGAAVKLADFGLAIEVN---DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH  218 (355)
T ss_pred             eeeeccCCCceeecccceEEEeC---CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH
Confidence            9975   3468999999998653   444566789999999999      789999999999999999999999652210


Q ss_pred             -----------CcC----HHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          143 -----------EFD----IISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       143 -----------~~~----~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                 .++    ....++..+++..|+..||.+|.|+.+.+.
T Consensus       219 rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~  266 (355)
T KOG0033|consen  219 RLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK  266 (355)
T ss_pred             HHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence                       111    234568899999999999999999988664

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.3e-30  Score=206.62  Aligned_cols=164  Identities=20%  Similarity=0.269  Sum_probs=142.0

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CC-cc-----------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GK-EE-----------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~-~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      |+-.+|||||++|++   +..+|||+|.-++|+|.+|+ +. .+           |++.|+.|+|.   ..++||||||+
T Consensus        71 MKLVQHpNiVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHq---LHVVHRDLKPE  147 (864)
T KOG4717|consen   71 MKLVQHPNIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQ---LHVVHRDLKPE  147 (864)
T ss_pred             HHHhcCcCeeeeeehhcccceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhh---hhhhcccCCcc
Confidence            455789999999999   88999999999999999999 33 32           99999999999   99999999999


Q ss_pred             cEEEcc-CCceEEecccCcccccCCCCCcceeeecccccccCCCC-------CCccchHHHHHHHHHHHhCCccccccCC
Q 039565           70 NILLNE-KVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTEL-------TEKSDVDSFEIVILEIITGILTVDLSFK  141 (188)
Q Consensus        70 nill~~-~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~-------~~~~di~s~G~~l~~~~~g~~p~~~~~~  141 (188)
                      |+.+-+ -|.+||.|||++-.+.   ......+.+|+..|.|||+       .+++||||+||++|-+++|+.||.....
T Consensus       148 NVVFFEKlGlVKLTDFGFSNkf~---PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeAND  224 (864)
T KOG4717|consen  148 NVVFFEKLGLVKLTDFGFSNKFQ---PGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEAND  224 (864)
T ss_pred             eeEEeeecCceEeeeccccccCC---CcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccc
Confidence            998754 5899999999986543   2234667899999999993       6889999999999999999999976544


Q ss_pred             CC-----------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 GE-----------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 ~~-----------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      .+           .+...+.++.+++..||..||.+|.+.++|+.
T Consensus       225 SETLTmImDCKYtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s  269 (864)
T KOG4717|consen  225 SETLTMIMDCKYTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVS  269 (864)
T ss_pred             hhhhhhhhcccccCchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence            33           56778899999999999999999999999875

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.97  E-value=9.1e-31  Score=202.58  Aligned_cols=165  Identities=22%  Similarity=0.278  Sum_probs=135.1

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc--c---------cHHHHHHHHhcCCCCCcEEeCCCCCcE
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE--E---------VCCPGLEYLHQGLKHPIIQRDMKSTNI   71 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~--~---------~i~~~l~~Lh~~~~~~i~h~dl~~~ni   71 (188)
                      +..++||||+++++.   +...++++||+++++|.+++.+.  .         |++.||.|||+   .+++|+||+|+||
T Consensus        70 l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~---~~i~H~dL~p~Ni  146 (297)
T cd06656          70 MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHS---NQVIHRDIKSDNI  146 (297)
T ss_pred             HHhCCCCCEeeEEEEEecCCEEEEeecccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHE
Confidence            456899999999988   77899999999999999998322  2         89999999999   9999999999999


Q ss_pred             EEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCC---
Q 039565           72 LLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKG---  142 (188)
Q Consensus        72 ll~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~---  142 (188)
                      +++.++.++++|||.+.......  .......++..|++||      ++.++|+||||+++|++++|..||......   
T Consensus       147 li~~~~~~~l~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~  224 (297)
T cd06656         147 LLGMDGSVKLTDFGFCAQITPEQ--SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL  224 (297)
T ss_pred             EECCCCCEEECcCccceEccCCc--cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhe
Confidence            99999999999999886542111  1222345777888888      567899999999999999999998543210   


Q ss_pred             -----------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          143 -----------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       143 -----------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                 ..+......+.+++..||+.+|++||+++++++
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  268 (297)
T cd06656         225 YLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ  268 (297)
T ss_pred             eeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                       122334567889999999999999999999988

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.97  E-value=1e-30  Score=201.96  Aligned_cols=166  Identities=19%  Similarity=0.211  Sum_probs=135.2

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC--cc---------cHHHHHHHHhcCCCCCcEEeCCCCCcE
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK--EE---------VCCPGLEYLHQGLKHPIIQRDMKSTNI   71 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~--~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~ni   71 (188)
                      +++++||||+++++.   .+..++++||+++++|.+++..  ..         |++.||+|||+   .+++|+|++|.||
T Consensus        73 l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Ni  149 (292)
T cd06658          73 MRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHN---QGVIHRDIKSDSI  149 (292)
T ss_pred             HHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHE
Confidence            467899999999988   7889999999999999998822  22         89999999999   9999999999999


Q ss_pred             EEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC----
Q 039565           72 LLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK----  141 (188)
Q Consensus        72 ll~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~----  141 (188)
                      +++.++.++++|||++......  ........++..|++||      ++.++|+||||+++|++++|..||.....    
T Consensus       150 ll~~~~~~kL~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~  227 (292)
T cd06658         150 LLTSDGRIKLSDFGFCAQVSKE--VPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAM  227 (292)
T ss_pred             EEcCCCCEEEccCcchhhcccc--cccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            9999999999999988654211  11223356778899999      47889999999999999999998853221    


Q ss_pred             --------CC--cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          142 --------GE--FDIISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       142 --------~~--~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                              ..  ........+.+++..|+..+|++|||++++++.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~  272 (292)
T cd06658         228 RRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQH  272 (292)
T ss_pred             HHHHhcCCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence                    11  111345578899999999999999999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.97  E-value=8.6e-31  Score=208.06  Aligned_cols=168  Identities=20%  Similarity=0.238  Sum_probs=128.4

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||+++++.   ....++||||+++|+|.+++ ++..           |++.||+|||+   .+|+||||||+|
T Consensus        55 l~~~~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~---~givHrDlKp~N  131 (363)
T cd05628          55 LVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQ---LGFIHRDIKPDN  131 (363)
T ss_pred             HHhCCCCCcceEEEEEecCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHH
Confidence            457899999999988   77889999999999999998 3222           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCC---------------------------------CcceeeecccccccCCC-----
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGG---------------------------------THMSTTIAGTAGFLNTE-----  112 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~---------------------------------~~~~~~~~~~~~~~~pe-----  112 (188)
                      |+++.++.++|+|||+++.......                                 ........|+..|+|||     
T Consensus       132 ILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~  211 (363)
T cd05628         132 LLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQT  211 (363)
T ss_pred             eEECCCCCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCC
Confidence            9999999999999999864321100                                 00012357899999999     


Q ss_pred             -CCCccchHHHHHHHHHHHhCCccccccCCCC-------------cCH--HHHHHHHHHHHHcc--CcCCCCCCCHHHHH
Q 039565          113 -LTEKSDVDSFEIVILEIITGILTVDLSFKGE-------------FDI--ISVEKAVEIAMASV--SSKVNRRPLMNQVV  174 (188)
Q Consensus       113 -~~~~~di~s~G~~l~~~~~g~~p~~~~~~~~-------------~~~--~~~~~~~~l~~~cl--~~~p~~Rps~~~i~  174 (188)
                       ++.++|+|||||++|+|++|..||......+             ++.  ..+..+.+++..++  ..++..||++++|+
T Consensus       212 ~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~  291 (363)
T cd05628         212 GYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIK  291 (363)
T ss_pred             CCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHh
Confidence             5788999999999999999999996432111             111  13456667776633  33444678999998


Q ss_pred             HH
Q 039565          175 MV  176 (188)
Q Consensus       175 ~~  176 (188)
                      +.
T Consensus       292 ~h  293 (363)
T cd05628         292 TN  293 (363)
T ss_pred             CC
Confidence            74

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.97  E-value=2e-30  Score=197.34  Aligned_cols=166  Identities=22%  Similarity=0.270  Sum_probs=130.7

Q ss_pred             cccccCCCeeeeccc-----CCccEEEEecCCCCChhhhcCC-c--c---------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK-----QKNNALELGFRGNPELVDQQGK-E--E---------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-----~~~~~lv~e~~~~~~L~~~~~~-~--~---------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +++++||||++++++     ....++++||+++++|.+++.. .  .         |++.||.|||+   .+++|+|++|
T Consensus        58 l~~l~h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~---~~i~H~~l~p  134 (266)
T cd06651          58 LKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHS---NMIVHRDIKG  134 (266)
T ss_pred             HHHcCCCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCH
Confidence            567899999999987     3567899999999999999822 1  1         99999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCC-CcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC-
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGG-THMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF-  140 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~-  140 (188)
                      +||+++.++.++++|||++........ ........++..|++||      ++.++|+||||+++|++++|..||.... 
T Consensus       135 ~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~  214 (266)
T cd06651         135 ANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA  214 (266)
T ss_pred             HHEEECCCCCEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch
Confidence            999999999999999998875421111 11112345777899998      4778999999999999999999985432 


Q ss_pred             ------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          141 ------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       141 ------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                  ....+......+.+++ .||..+|++||++++|++
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~  260 (266)
T cd06651         215 MAAIFKIATQPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLR  260 (266)
T ss_pred             HHHHHHHhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence                        1223334455666766 788899999999999975

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.97  E-value=1e-30  Score=200.48  Aligned_cols=164  Identities=19%  Similarity=0.175  Sum_probs=129.1

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-c--c------------cHHHHHHHHhcCCCCCcEEeCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-E--E------------VCCPGLEYLHQGLKHPIIQRDMK   67 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~--~------------~i~~~l~~Lh~~~~~~i~h~dl~   67 (188)
                      +.+++||||+++++.   +...++++||+. ++|.+++.. .  .            |++.||.|||+   .+++|+|++
T Consensus        53 l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~  128 (285)
T cd07861          53 LKELQHPNIVCLQDVLMQESRLYLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHS---RRVLHRDLK  128 (285)
T ss_pred             HHhcCCCCEeeeEEEEeeCCeEEEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCC
Confidence            456889999999999   788999999998 688888721 1  1            99999999999   999999999


Q ss_pred             CCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           68 STNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        68 ~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      |+||+++.++.++|+|||++.......  .......++..|++||       ++.++|+||||+++|++++|..||....
T Consensus       129 p~nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~  206 (285)
T cd07861         129 PQNLLIDNKGVIKLADFGLARAFGIPV--RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDS  206 (285)
T ss_pred             HHHEEEcCCCcEEECcccceeecCCCc--ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence            999999999999999999887542111  1112234567789998       3567999999999999999998885321


Q ss_pred             CCC----------------------------------------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          141 KGE----------------------------------------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       141 ~~~----------------------------------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ...                                        .....+.++.+++..||+.+|.+|||+.++++
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~  281 (285)
T cd07861         207 EIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN  281 (285)
T ss_pred             HHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence            100                                        00012456779999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=1.6e-31  Score=209.66  Aligned_cols=161  Identities=23%  Similarity=0.286  Sum_probs=130.5

Q ss_pred             cCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEc
Q 039565           10 TGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTNILLN   74 (188)
Q Consensus        10 ~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~   74 (188)
                      +||||+++++.   ....++||||+++|+|..++.+..            |++.||+|||+   .+++||||||+||+++
T Consensus        54 ~~p~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~---~~ivHrDlkp~Nili~  130 (330)
T cd05586          54 ESPFIVGLKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHK---YDIVYRDLKPENILLD  130 (330)
T ss_pred             CCCcCcceEEEEecCCeEEEEEcCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEEC
Confidence            69999999887   778999999999999998882221            99999999999   9999999999999999


Q ss_pred             cCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCCCC----
Q 039565           75 EKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFKGE----  143 (188)
Q Consensus        75 ~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~~----  143 (188)
                      .++.++|+|||++.....  .........|+..|++||       ++.++|+|||||++|+|++|..||......+    
T Consensus       131 ~~~~~kl~Dfg~a~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~  208 (330)
T cd05586         131 ATGHIALCDFGLSKANLT--DNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRN  208 (330)
T ss_pred             CCCCEEEecCCcCcCCCC--CCCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHH
Confidence            999999999999864321  112233457889999998       4678999999999999999999985432111    


Q ss_pred             -------cC-HHHHHHHHHHHHHccCcCCCCCC----CHHHHHH
Q 039565          144 -------FD-IISVEKAVEIAMASVSSKVNRRP----LMNQVVM  175 (188)
Q Consensus       144 -------~~-~~~~~~~~~l~~~cl~~~p~~Rp----s~~~i~~  175 (188)
                             .+ ...+..+.+++..||+.+|.+||    +++++++
T Consensus       209 i~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~  252 (330)
T cd05586         209 IAFGKVRFPKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE  252 (330)
T ss_pred             HHcCCCCCCCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence                   11 12456788999999999999998    5666655

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=2.1e-30  Score=211.02  Aligned_cols=167  Identities=23%  Similarity=0.254  Sum_probs=129.6

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc---c---------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE---E---------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~---~---------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +++++||||++++++   ....++++|++. ++|..++ ...   .         |++.||.|||+   .+|+||||||+
T Consensus       214 L~~L~HpnIv~l~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDLKP~  289 (461)
T PHA03211        214 LRRLSHPAVLALLDVRVVGGLTCLVLPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHG---EGIIHRDIKTE  289 (461)
T ss_pred             HHHCCCCCCCcEEEEEEECCEEEEEEEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCEEECcCCHH
Confidence            567899999999998   778899999996 6888887 321   1         99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccc-cccCC-
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTV-DLSFK-  141 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~-~~~~~-  141 (188)
                      ||+++.++.++|+|||+++...............|+..|++||      ++.++|+|||||++|++++|..++ ..... 
T Consensus       290 NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~  369 (461)
T PHA03211        290 NVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGD  369 (461)
T ss_pred             HEEECCCCCEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCccc
Confidence            9999999999999999987543222222223456899999999      578899999999999999876322 11000 


Q ss_pred             --------------------CCcCH-------------------------------HHHHHHHHHHHHccCcCCCCCCCH
Q 039565          142 --------------------GEFDI-------------------------------ISVEKAVEIAMASVSSKVNRRPLM  170 (188)
Q Consensus       142 --------------------~~~~~-------------------------------~~~~~~~~l~~~cl~~~p~~Rps~  170 (188)
                                          .+++.                               .....+.+++..||+.||.+|||+
T Consensus       370 ~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa  449 (461)
T PHA03211        370 ERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSA  449 (461)
T ss_pred             ccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCH
Confidence                                00000                               112357789999999999999999


Q ss_pred             HHHHHH
Q 039565          171 NQVVMV  176 (188)
Q Consensus       171 ~~i~~~  176 (188)
                      .|+++.
T Consensus       450 ~elL~h  455 (461)
T PHA03211        450 AELLRL  455 (461)
T ss_pred             HHHhhC
Confidence            999874

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.97  E-value=1.4e-30  Score=201.64  Aligned_cols=165  Identities=19%  Similarity=0.218  Sum_probs=134.4

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc--c---------cHHHHHHHHhcCCCCCcEEeCCCCCcE
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE--E---------VCCPGLEYLHQGLKHPIIQRDMKSTNI   71 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~--~---------~i~~~l~~Lh~~~~~~i~h~dl~~~ni   71 (188)
                      +.+++||||+++++.   .+..++++||+++++|..++...  .         |++.||.|||+   .+++|+|++|+||
T Consensus        72 l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dl~p~Ni  148 (297)
T cd06659          72 MRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQTRLNEEQIATVCESVLQALCYLHS---QGVIHRDIKSDSI  148 (297)
T ss_pred             HHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHe
Confidence            466899999999998   78899999999999999988322  2         99999999999   9999999999999


Q ss_pred             EEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCC---
Q 039565           72 LLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKG---  142 (188)
Q Consensus        72 ll~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~---  142 (188)
                      +++.++.++|+|||++......  ........++..|++||      ++.++|+||||+++|++++|..||......   
T Consensus       149 ll~~~~~~kL~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~  226 (297)
T cd06659         149 LLTLDGRVKLSDFGFCAQISKD--VPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM  226 (297)
T ss_pred             EEccCCcEEEeechhHhhcccc--cccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            9999999999999988643211  11223356778899998      477899999999999999999988532110   


Q ss_pred             -----------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          143 -----------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       143 -----------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                 .........+.+++..||+.+|++||+++++++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~  270 (297)
T cd06659         227 KRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLD  270 (297)
T ss_pred             HHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence                       011123457889999999999999999999998

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.97  E-value=2.9e-30  Score=196.64  Aligned_cols=166  Identities=21%  Similarity=0.294  Sum_probs=135.1

Q ss_pred             cccCCCeeeeccc---CCccEEEEecCCCCChhhhcC----Cc---c---------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            8 KLTGPLLVELIGK---QKNNALELGFRGNPELVDQQG----KE---E---------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         8 ~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~----~~---~---------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      .++||||+++++.   .+..++++||+++++|.+++.    ..   .         |++.||.|||+  ..+++|+|++|
T Consensus        65 ~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~--~~~i~H~dl~~  142 (269)
T cd08528          65 QLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHK--EKRIVHRDLTP  142 (269)
T ss_pred             cCCCCCeeeEEeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhcc--CCceeecCCCH
Confidence            4789999999998   788999999999999988761    11   1         89999999995  16799999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC-
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK-  141 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~-  141 (188)
                      .||+++.++.++++|||.+.......   ......++..|++||      ++.++|+||||+++|++++|..||..... 
T Consensus       143 ~nil~~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~  219 (269)
T cd08528         143 NNIMLGEDDKVTITDFGLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML  219 (269)
T ss_pred             HHEEECCCCcEEEecccceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHH
Confidence            99999999999999999987543211   233456777889998      57889999999999999999999854321 


Q ss_pred             -----------CC-cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHh
Q 039565          142 -----------GE-FDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVRE  178 (188)
Q Consensus       142 -----------~~-~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~  178 (188)
                                 .. .....+..+.+++.+||+.+|++||++.++.++++
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         220 SLATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             HHHHHHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence                       11 11134578999999999999999999999999886

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.97  E-value=3.9e-30  Score=200.12  Aligned_cols=167  Identities=17%  Similarity=0.187  Sum_probs=131.8

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-cc-------------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-EE-------------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~~-------------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +++++||||+++++.   .+..++++||+++++|.+++.+ ..             |++.||.|||+   .+++|+|++|
T Consensus        53 l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~---~~ivH~dlk~  129 (314)
T cd08216          53 SRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHS---KGFIHRSVKA  129 (314)
T ss_pred             HHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCc
Confidence            567899999999988   7788999999999999999832 11             99999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCC-----cceeeecccccccCCC--------CCCccchHHHHHHHHHHHhCCcc
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGT-----HMSTTIAGTAGFLNTE--------LTEKSDVDSFEIVILEIITGILT  135 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~-----~~~~~~~~~~~~~~pe--------~~~~~di~s~G~~l~~~~~g~~p  135 (188)
                      +||+++.++.++++||+.+.........     .......++..|++||        ++.++|+||||+++|++++|..|
T Consensus       130 ~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~p  209 (314)
T cd08216         130 SHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVP  209 (314)
T ss_pred             ceEEEecCCceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCC
Confidence            9999999999999999987643211110     1112234556788888        45789999999999999999998


Q ss_pred             ccccCCC---------------------------------------------CcCHHHHHHHHHHHHHccCcCCCCCCCH
Q 039565          136 VDLSFKG---------------------------------------------EFDIISVEKAVEIAMASVSSKVNRRPLM  170 (188)
Q Consensus       136 ~~~~~~~---------------------------------------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~  170 (188)
                      |......                                             .........+.+++..||+.+|++|||+
T Consensus       210 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~  289 (314)
T cd08216         210 FKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSA  289 (314)
T ss_pred             CCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCH
Confidence            8532100                                             0111234578899999999999999999


Q ss_pred             HHHHH
Q 039565          171 NQVVM  175 (188)
Q Consensus       171 ~~i~~  175 (188)
                      +++++
T Consensus       290 ~~ll~  294 (314)
T cd08216         290 SQLLN  294 (314)
T ss_pred             HHHhc
Confidence            99987

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.97  E-value=2.2e-30  Score=198.86  Aligned_cols=166  Identities=23%  Similarity=0.252  Sum_probs=131.3

Q ss_pred             cccc-cCCCeeeeccc--------CCccEEEEecCCCCChhhhcC----Ccc------------cHHHHHHHHhcCCCCC
Q 039565            6 RNKL-TGPLLVELIGK--------QKNNALELGFRGNPELVDQQG----KEE------------VCCPGLEYLHQGLKHP   60 (188)
Q Consensus         6 l~~l-~Hpniv~~~~~--------~~~~~lv~e~~~~~~L~~~~~----~~~------------~i~~~l~~Lh~~~~~~   60 (188)
                      +.++ +||||+++++.        ....+++|||+++++|.+++.    ...            |++.||.|||+   .+
T Consensus        68 l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~  144 (286)
T cd06638          68 LKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHV---NK  144 (286)
T ss_pred             HHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHh---CC
Confidence            4456 69999999886        346799999999999998761    111            88999999999   99


Q ss_pred             cEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-----------CCCccchHHHHHHHHHH
Q 039565           61 IIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-----------LTEKSDVDSFEIVILEI  129 (188)
Q Consensus        61 i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-----------~~~~~di~s~G~~l~~~  129 (188)
                      ++|+|++|+||+++.++.++++|||.+......  ........|+..|++||           ++.++|+||||+++|++
T Consensus       145 i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el  222 (286)
T cd06638         145 TIHRDVKGNNILLTTEGGVKLVDFGVSAQLTST--RLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIEL  222 (286)
T ss_pred             ccccCCCHHhEEECCCCCEEEccCCceeecccC--CCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHH
Confidence            999999999999999999999999998754311  11223345778899998           35689999999999999


Q ss_pred             HhCCccccccCCC--------------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          130 ITGILTVDLSFKG--------------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       130 ~~g~~p~~~~~~~--------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                      ++|..|+......              ..+......+.+++..||+.+|++|||+.++++.
T Consensus       223 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  283 (286)
T cd06638         223 GDGDPPLADLHPMRALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH  283 (286)
T ss_pred             hcCCCCCCCCchhHHHhhccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence            9999887532110              0112234579999999999999999999999874

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=6.6e-31  Score=209.66  Aligned_cols=167  Identities=20%  Similarity=0.238  Sum_probs=130.1

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||+++++.   ....++||||+++|+|.+++.+..            |++.||+|||+   .+++||||||+|
T Consensus        55 l~~l~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~---~givHrDlkp~N  131 (377)
T cd05629          55 LAESDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHK---LGFIHRDIKPDN  131 (377)
T ss_pred             HHhCCCCCcceEEEEEEcCCeeEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHH
Confidence            456899999999988   778999999999999999982221            99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCC-----------c----------------------------------ceeeeccc
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGT-----------H----------------------------------MSTTIAGT  105 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~-----------~----------------------------------~~~~~~~~  105 (188)
                      |+++.++.++++|||+++.+......           .                                  ......|+
T Consensus       132 Ill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  211 (377)
T cd05629         132 ILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGT  211 (377)
T ss_pred             EEECCCCCEEEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCC
Confidence            99999999999999988532110000           0                                  00123588


Q ss_pred             ccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCC-------------CcCH--HHHHHHHHHHHHccCcCC
Q 039565          106 AGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKG-------------EFDI--ISVEKAVEIAMASVSSKV  164 (188)
Q Consensus       106 ~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~-------------~~~~--~~~~~~~~l~~~cl~~~p  164 (188)
                      +.|+|||      ++.++|+|||||++|+|++|..||......             .++.  ..+..+.+++..|+. +|
T Consensus       212 ~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~  290 (377)
T cd05629         212 PDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NA  290 (377)
T ss_pred             ccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CH
Confidence            8999998      588999999999999999999998543211             1111  235678899999997 66


Q ss_pred             CCC---CCHHHHHHH
Q 039565          165 NRR---PLMNQVVMV  176 (188)
Q Consensus       165 ~~R---ps~~~i~~~  176 (188)
                      .+|   ++++++++.
T Consensus       291 ~~r~~r~~~~~~l~h  305 (377)
T cd05629         291 ENRLGRGGAHEIKSH  305 (377)
T ss_pred             hhcCCCCCHHHHhcC
Confidence            654   599998873

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.97  E-value=3.2e-31  Score=215.78  Aligned_cols=170  Identities=20%  Similarity=0.243  Sum_probs=141.7

Q ss_pred             CCcccccCCCeeeeccc--CCccEEEEecCCCCChhhhcCCcc--------------cHHHHHHHHhcCCCCCcEEeCCC
Q 039565            4 PNRNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQGKEE--------------VCCPGLEYLHQGLKHPIIQRDMK   67 (188)
Q Consensus         4 ~~l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~--------------~i~~~l~~Lh~~~~~~i~h~dl~   67 (188)
                      +.|.+++|||++++||+  +....+|+|.++.|+|.+.+++..              |+|.||.||.+   +++|||||.
T Consensus       163 s~M~~L~H~hliRLyGvVl~qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLes---krlvHRDLA  239 (1039)
T KOG0199|consen  163 SHMLKLQHPHLIRLYGVVLDQPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLES---KRLVHRDLA  239 (1039)
T ss_pred             HHHHhccCcceeEEeeeeccchhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhh---hhhhhhhhh
Confidence            45789999999999999  899999999999999999994422              99999999999   999999999


Q ss_pred             CCcEEEccCCceEEecccCcccccCCCCCc-ceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCcccc--
Q 039565           68 STNILLNEKVQAKLADFGQSRISPVEGGTH-MSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVD--  137 (188)
Q Consensus        68 ~~nill~~~~~~kl~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~--  137 (188)
                      ..|+++.....+||+|||+.+......... ......-...|.+||      |+.++|+|+|||++|||++ |..||.  
T Consensus       240 ARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~  319 (1039)
T KOG0199|consen  240 ARNLLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGC  319 (1039)
T ss_pred             hhhheecccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCC
Confidence            999999999999999999988654222221 111234456788998      8999999999999999997 557763  


Q ss_pred             ----------ccCCCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          138 ----------LSFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       138 ----------~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                                ..-.-+.++.+++.+++++..||..+|++||||..|.+.
T Consensus       320 ~g~qIL~~iD~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~  368 (1039)
T KOG0199|consen  320 RGIQILKNIDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRED  368 (1039)
T ss_pred             CHHHHHHhccccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence                      222334667899999999999999999999999999743

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.97  E-value=1.6e-30  Score=199.45  Aligned_cols=164  Identities=17%  Similarity=0.162  Sum_probs=128.6

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +++++||||+++++.   ....++++||++ ++|.+++ ....            |++.||.|||+   .+++|+|++|+
T Consensus        53 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dl~~~  128 (284)
T cd07839          53 LKELKHKNIVRLYDVLHSDKKLTLVFEYCD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHS---HNVLHRDLKPQ  128 (284)
T ss_pred             HHhcCCCCeeeHHHHhccCCceEEEEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHH
Confidence            466899999999999   778899999998 5788777 2211            99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCCC
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFKG  142 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~  142 (188)
                      ||+++.++.++++|||++.......  .......++..|++||       ++.++|+||||+++|+|++|..|+.+....
T Consensus       129 nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~  206 (284)
T cd07839         129 NLLINKNGELKLADFGLARAFGIPV--RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV  206 (284)
T ss_pred             HEEEcCCCcEEECccchhhccCCCC--CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCH
Confidence            9999999999999999887542111  1122234567788998       467899999999999999998775321110


Q ss_pred             -----------------------------------------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          143 -----------------------------------------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       143 -----------------------------------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                                               ......+..+.+++.+||+.+|.+|||++++++
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~  280 (284)
T cd07839         207 DDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ  280 (284)
T ss_pred             HHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence                                                     000123457789999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.97  E-value=8.6e-31  Score=209.33  Aligned_cols=166  Identities=16%  Similarity=0.193  Sum_probs=128.7

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +++++||||+++++.   ....++||||+++|+|.+++.+..            |++.||.|||+   .+|+||||||+|
T Consensus        55 l~~~~h~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~---~~ivHrDlKp~N  131 (382)
T cd05625          55 LAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHK---MGFIHRDIKPDN  131 (382)
T ss_pred             HHhCCCCcCCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHH
Confidence            467899999999988   778999999999999999982221            89999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCC---------------------------------------------CCcceeeeccc
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEG---------------------------------------------GTHMSTTIAGT  105 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~  105 (188)
                      |+++.++.+||+|||++.......                                             .........|+
T Consensus       132 ILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  211 (382)
T cd05625         132 ILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGT  211 (382)
T ss_pred             EEECCCCCEEEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccC
Confidence            999999999999999864221000                                             00001124688


Q ss_pred             ccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCC-------------Cc--CHHHHHHHHHHHHHccCcCC
Q 039565          106 AGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKG-------------EF--DIISVEKAVEIAMASVSSKV  164 (188)
Q Consensus       106 ~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~-------------~~--~~~~~~~~~~l~~~cl~~~p  164 (188)
                      +.|+|||      ++.++|+|||||++|+|++|..||......             ..  ....+..+.+++..++ .+|
T Consensus       212 ~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p  290 (382)
T cd05625         212 PNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGP  290 (382)
T ss_pred             cccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCH
Confidence            9999999      578899999999999999999999643211             01  1123556777777765 489


Q ss_pred             CCCCC---HHHHHH
Q 039565          165 NRRPL---MNQVVM  175 (188)
Q Consensus       165 ~~Rps---~~~i~~  175 (188)
                      .+|++   ++++++
T Consensus       291 ~~R~~~~~~~ei~~  304 (382)
T cd05625         291 EDRLGKNGADEIKA  304 (382)
T ss_pred             hHcCCCCCHHHHhc
Confidence            99997   877765

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.97  E-value=1.3e-30  Score=200.59  Aligned_cols=164  Identities=24%  Similarity=0.282  Sum_probs=133.7

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc----c---------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE----E---------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~----~---------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +.+++|+||+++.+.   .+..+++|||+.+++|.+++ ...    .         |++.||.|||+   .+++|+|+||
T Consensus        54 l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp  130 (285)
T cd05630          54 LEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQ---ERIVYRDLKP  130 (285)
T ss_pred             HHhCCCCCeeeeeEEEecCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCH
Confidence            457899999999887   78899999999999999887 211    1         89999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCC
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKG  142 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~  142 (188)
                      +||+++.++.++++|||++......   .......|+..|++||      ++.++|+||||+++|++++|..||......
T Consensus       131 ~Nil~~~~~~~~l~Dfg~~~~~~~~---~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~  207 (285)
T cd05630         131 ENILLDDHGHIRISDLGLAVHVPEG---QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK  207 (285)
T ss_pred             HHEEECCCCCEEEeeccceeecCCC---ccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCcc
Confidence            9999999999999999988643211   1122346788899999      578899999999999999999999753221


Q ss_pred             ---------------CcCHHHHHHHHHHHHHccCcCCCCCCC-----HHHHHH
Q 039565          143 ---------------EFDIISVEKAVEIAMASVSSKVNRRPL-----MNQVVM  175 (188)
Q Consensus       143 ---------------~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~i~~  175 (188)
                                     ..+...+..+.+++..||+.+|++|||     ++++++
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~  260 (285)
T cd05630         208 IKREEVERLVKEVQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE  260 (285)
T ss_pred             chHHHHHhhhhhhhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence                           111224456889999999999999999     888887

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.97  E-value=1.4e-30  Score=201.75  Aligned_cols=170  Identities=19%  Similarity=0.202  Sum_probs=133.0

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||++++++   ....++++||++ ++|..++ +...            |++.||.|||+   .+++|+|++|+
T Consensus        58 l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~i~H~dlkp~  133 (301)
T cd07873          58 LKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHR---RKVLHRDLKPQ  133 (301)
T ss_pred             HHhcCCCCcceEEEEEecCCeEEEEEeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHH
Confidence            467899999999999   778899999998 5888887 2211            99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCCC
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFKG  142 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~  142 (188)
                      ||+++.++.++++|||++.......  .......++..|++||       ++.++|+||||+++|+|++|..||......
T Consensus       134 Nil~~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~  211 (301)
T cd07873         134 NLLINERGELKLADFGLARAKSIPT--KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVE  211 (301)
T ss_pred             HEEECCCCcEEECcCcchhccCCCC--CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            9999999999999999886532111  1122234567889998       356799999999999999999888532110


Q ss_pred             ------------------------------Cc-----------CHHHHHHHHHHHHHccCcCCCCCCCHHHHHH--HHhh
Q 039565          143 ------------------------------EF-----------DIISVEKAVEIAMASVSSKVNRRPLMNQVVM--VREQ  179 (188)
Q Consensus       143 ------------------------------~~-----------~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~--~l~~  179 (188)
                                                    ..           ....+..+.+++.+|++.+|.+|||++++++  .++.
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~  291 (301)
T cd07873         212 EQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHC  291 (301)
T ss_pred             HHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence                                          00           0113456789999999999999999999987  4444


Q ss_pred             cc
Q 039565          180 GS  181 (188)
Q Consensus       180 ~~  181 (188)
                      +.
T Consensus       292 ~~  293 (301)
T cd07873         292 LG  293 (301)
T ss_pred             cc
Confidence            44

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.97  E-value=2.5e-30  Score=195.85  Aligned_cols=167  Identities=20%  Similarity=0.261  Sum_probs=135.7

Q ss_pred             CcccccCCCeeeeccc-----CCccEEEEecCCCCChhhhcCCc-----c-----------cHHHHHHHHh-----cCCC
Q 039565            5 NRNKLTGPLLVELIGK-----QKNNALELGFRGNPELVDQQGKE-----E-----------VCCPGLEYLH-----QGLK   58 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~-----~-----------~i~~~l~~Lh-----~~~~   58 (188)
                      .+++++||||+++++.     ....++++||+++++|.+++...     .           |++.||.|||     +   
T Consensus        52 ~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~---  128 (265)
T cd08217          52 ILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPG---  128 (265)
T ss_pred             HHHhcCCCccceeeeeeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCcccc---
Confidence            3567899999999886     45578999999999999998221     1           8999999999     6   


Q ss_pred             CCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhC
Q 039565           59 HPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITG  132 (188)
Q Consensus        59 ~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g  132 (188)
                      .+++|+|++|+||+++.++.++++|||.+.......  .......++..|++||      .+.++|+||||++++++++|
T Consensus       129 ~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~--~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g  206 (265)
T cd08217         129 NTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDS--SFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCAL  206 (265)
T ss_pred             CcceecCCCHHHEEEecCCCEEEecccccccccCCc--ccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHC
Confidence            899999999999999999999999999887543211  1123346778899998      46789999999999999999


Q ss_pred             CccccccC------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          133 ILTVDLSF------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       133 ~~p~~~~~------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                      ..||+...            ....+...+..+.+++..|++.+|.+||++.+|++.
T Consensus       207 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~  262 (265)
T cd08217         207 SPPFTARNQLQLASKIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL  262 (265)
T ss_pred             CCcccCcCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence            99986432            112334556789999999999999999999999873

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.97  E-value=3.3e-30  Score=197.73  Aligned_cols=165  Identities=22%  Similarity=0.231  Sum_probs=131.0

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc---c---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE---E---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~---~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +++++|||++++++.   ....++++||+++++|..+....   .         |++.||.|||+   .+++|+|++|+|
T Consensus        54 l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~---~~i~H~dl~p~n  130 (286)
T cd07847          54 LKQLKHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHK---HNCIHRDVKPEN  130 (286)
T ss_pred             HHhCCCCCEeeeeeEEeeCCEEEEEEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCChhh
Confidence            467889999999998   77889999999998888877222   1         99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCCCC
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFKGE  143 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~~  143 (188)
                      |+++.++.++++|||++........  ......++..|++||       ++.++|+||||+++|++++|..||......+
T Consensus       131 il~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~  208 (286)
T cd07847         131 ILITKQGQIKLCDFGFARILTGPGD--DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVD  208 (286)
T ss_pred             EEEcCCCcEEECccccceecCCCcc--cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHH
Confidence            9999999999999999875432111  122334666788887       3568999999999999999999885322100


Q ss_pred             -------------------------------------c-----CHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          144 -------------------------------------F-----DIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       144 -------------------------------------~-----~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                                           .     ....+..+.+++.+||+.+|++||++.+++.
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  282 (286)
T cd07847         209 QLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE  282 (286)
T ss_pred             HHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence                                                 0     0112456889999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=5.3e-30  Score=203.18  Aligned_cols=163  Identities=20%  Similarity=0.249  Sum_probs=125.8

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +++++||||++++++   ....++++|++. ++|..++ .+..            |++.||.|||+   .+++||||||+
T Consensus       111 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~  186 (357)
T PHA03209        111 LQNVNHPSVIRMKDTLVSGAITCMVLPHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHA---QRIIHRDVKTE  186 (357)
T ss_pred             HHhCCCCCCcChhheEEeCCeeEEEEEccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHH
Confidence            567899999999998   778899999996 5888887 2221            99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCc-cccccCCC
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGIL-TVDLSFKG  142 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~-p~~~~~~~  142 (188)
                      ||+++.++.++|+|||.++...   .........|+..|++||      ++.++|+|||||++|+++++.. +|+.....
T Consensus       187 Nill~~~~~~kl~DfG~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~  263 (357)
T PHA03209        187 NIFINDVDQVCIGDLGAAQFPV---VAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPST  263 (357)
T ss_pred             HEEECCCCCEEEecCccccccc---cCcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCc
Confidence            9999999999999999886422   111223456888999999      5788999999999999998543 33211100


Q ss_pred             ------------------------CcC----H--------------------------HHHHHHHHHHHHccCcCCCCCC
Q 039565          143 ------------------------EFD----I--------------------------ISVEKAVEIAMASVSSKVNRRP  168 (188)
Q Consensus       143 ------------------------~~~----~--------------------------~~~~~~~~l~~~cl~~~p~~Rp  168 (188)
                                              +++    .                          ..+..+.+++..||+.||.+||
T Consensus       264 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rp  343 (357)
T PHA03209        264 PEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRP  343 (357)
T ss_pred             HHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCc
Confidence                                    000    0                          0122344689999999999999


Q ss_pred             CHHHHHH
Q 039565          169 LMNQVVM  175 (188)
Q Consensus       169 s~~~i~~  175 (188)
                      |+.++++
T Consensus       344 ta~e~l~  350 (357)
T PHA03209        344 SAEEILN  350 (357)
T ss_pred             CHHHHhc
Confidence            9999986

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.97  E-value=4.1e-30  Score=198.59  Aligned_cols=166  Identities=22%  Similarity=0.261  Sum_probs=135.5

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc--c---------cHHHHHHHHhcCCCCCcEEeCCCCCcE
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE--E---------VCCPGLEYLHQGLKHPIIQRDMKSTNI   71 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~--~---------~i~~~l~~Lh~~~~~~i~h~dl~~~ni   71 (188)
                      +.+++||||+++++.   .+..++|+||+++++|.+++.+.  .         |++.|+.|||+   .+++|+|++|+||
T Consensus        70 l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~---~gi~H~dL~p~Ni  146 (293)
T cd06647          70 MRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNI  146 (293)
T ss_pred             HhhcCCCCeeehhheeeeCCcEEEEEecCCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHh---CCEeeccCCHHHE
Confidence            467899999999988   77899999999999999998322  2         89999999999   9999999999999


Q ss_pred             EEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCCC--
Q 039565           72 LLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKGE--  143 (188)
Q Consensus        72 ll~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~~--  143 (188)
                      +++.++.++++|||++.......  .......++..|++||      ++.++|+||||+++|++++|..||.......  
T Consensus       147 li~~~~~~kL~dfg~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~  224 (293)
T cd06647         147 LLGMDGSVKLTDFGFCAQITPEQ--SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL  224 (293)
T ss_pred             EEcCCCCEEEccCcceecccccc--cccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhe
Confidence            99999999999999876443111  1223345777899998      4678999999999999999999986432110  


Q ss_pred             ------------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          144 ------------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       144 ------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                                  .+......+.+++..||..+|++||++++++.+
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h  269 (293)
T cd06647         225 YLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH  269 (293)
T ss_pred             eehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                        112345678899999999999999999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.97  E-value=5.6e-30  Score=197.78  Aligned_cols=167  Identities=25%  Similarity=0.291  Sum_probs=135.9

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-------------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-------------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-------------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      |+.++||.++.+|..   ++..+++||||+||+|.... ++.+             +++.||+|||-   .|||+|||||
T Consensus       131 L~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHm---lGivYRDLKP  207 (459)
T KOG0610|consen  131 LSLLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHM---LGIVYRDLKP  207 (459)
T ss_pred             HHhcCCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHh---hceeeccCCc
Confidence            567999999999999   88899999999999999998 3333             89999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCC--------------------------------CCC--------------------
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVE--------------------------------GGT--------------------   96 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~--------------------------------~~~--------------------   96 (188)
                      +|||+-++|++.|+||.++......                                ...                    
T Consensus       208 ENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep  287 (459)
T KOG0610|consen  208 ENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEP  287 (459)
T ss_pred             ceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCC
Confidence            9999999999999999876432100                                000                    


Q ss_pred             --cceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCCC-----------cC--HHHHHHHHHH
Q 039565           97 --HMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKGE-----------FD--IISVEKAVEI  155 (188)
Q Consensus        97 --~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~~-----------~~--~~~~~~~~~l  155 (188)
                        .....+.||-.|+|||      .+.++|.|+||+++|||+.|..||......+           ++  ...+..+.++
T Consensus       288 ~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDL  367 (459)
T KOG0610|consen  288 TGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDL  367 (459)
T ss_pred             CCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHH
Confidence              0112367888999999      4889999999999999999999996543322           11  2456789999


Q ss_pred             HHHccCcCCCCCCC----HHHHHH
Q 039565          156 AMASVSSKVNRRPL----MNQVVM  175 (188)
Q Consensus       156 ~~~cl~~~p~~Rps----~~~i~~  175 (188)
                      |.+.|.+||.+|.-    +.+|.+
T Consensus       368 Ir~LLvKdP~kRlg~~rGA~eIK~  391 (459)
T KOG0610|consen  368 IRKLLVKDPSKRLGSKRGAAEIKR  391 (459)
T ss_pred             HHHHhccChhhhhccccchHHhhc
Confidence            99999999999997    666654

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=2.1e-30  Score=206.27  Aligned_cols=160  Identities=19%  Similarity=0.284  Sum_probs=132.8

Q ss_pred             CCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc-------------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEc
Q 039565           11 GPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE-------------VCCPGLEYLHQGLKHPIIQRDMKSTNILLN   74 (188)
Q Consensus        11 Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~-------------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~   74 (188)
                      |.+||+++++   ++.+|+|||+-+ -+|..++++..             |++.|+.++|.   .||||.||||.|.++-
T Consensus       419 ~~~IIqL~DYEv~d~~lYmvmE~Gd-~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~---~gIVHSDLKPANFLlV  494 (677)
T KOG0596|consen  419 HDKIIQLYDYEVTDGYLYMVMECGD-IDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQ---HGIVHSDLKPANFLLV  494 (677)
T ss_pred             CceEEEEeeeeccCceEEEEeeccc-ccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHH---hceeecCCCcccEEEE
Confidence            7899999999   889999999987 58999993332             99999999999   9999999999999987


Q ss_pred             cCCceEEecccCcccccCCCCCcceeeecccccccCCC-----------------CCCccchHHHHHHHHHHHhCCcccc
Q 039565           75 EKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-----------------LTEKSDVDSFEIVILEIITGILTVD  137 (188)
Q Consensus        75 ~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-----------------~~~~~di~s~G~~l~~~~~g~~p~~  137 (188)
                      + |.+||.|||++..+......-......||+.||+||                 .+.++||||+||++|+|+-|+.||.
T Consensus       495 k-G~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~  573 (677)
T KOG0596|consen  495 K-GRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFG  573 (677)
T ss_pred             e-eeEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchH
Confidence            6 599999999998776444444556789999999999                 4678999999999999999999985


Q ss_pred             cc--------------CCCCcCHHH-HHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          138 LS--------------FKGEFDIIS-VEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       138 ~~--------------~~~~~~~~~-~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ..              ...+++..- ...+.+++..||..||.+|||+.++++
T Consensus       574 ~~~n~~aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLq  626 (677)
T KOG0596|consen  574 QIINQIAKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQ  626 (677)
T ss_pred             HHHHHHHHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence            32              112333211 223999999999999999999999987

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.97  E-value=2.7e-30  Score=198.52  Aligned_cols=166  Identities=28%  Similarity=0.359  Sum_probs=134.8

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +..++||||+++++.   ....++++||+++++|..++.+.+            +++.||.|||+.  .+++|+|++|+|
T Consensus        57 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~n  134 (284)
T cd06620          57 MHECRSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNV--HRIMHRDIKPSN  134 (284)
T ss_pred             HHHcCCCCcceEeeeEecCCEEEEEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHh--cCeeccCCCHHH
Confidence            456899999999998   788999999999999999883221            899999999962  589999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCC--
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKG--  142 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~--  142 (188)
                      |+++.++.++++|||++......    ......++..|++||      ++.++|+|||||++|++++|..||+.....  
T Consensus       135 il~~~~~~~~l~d~gl~~~~~~~----~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~  210 (284)
T cd06620         135 ILVNSRGQIKLCDFGVSGELINS----IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDD  210 (284)
T ss_pred             EEECCCCcEEEccCCcccchhhh----ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhh
Confidence            99999999999999987643211    122346777888888      467899999999999999999998743321  


Q ss_pred             ---------------------CcC-HHHHHHHHHHHHHccCcCCCCCCCHHHHHHHH
Q 039565          143 ---------------------EFD-IISVEKAVEIAMASVSSKVNRRPLMNQVVMVR  177 (188)
Q Consensus       143 ---------------------~~~-~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l  177 (188)
                                           ..+ ...+..+.+++..|++.+|++|||+++++++.
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~  267 (284)
T cd06620         211 GQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP  267 (284)
T ss_pred             hhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence                                 011 12456788999999999999999999999864

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.97  E-value=4.6e-30  Score=197.19  Aligned_cols=164  Identities=26%  Similarity=0.343  Sum_probs=133.8

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc------c---------cHHHHHHHHhcCCCCCcEEeCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE------E---------VCCPGLEYLHQGLKHPIIQRDMK   67 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~------~---------~i~~~l~~Lh~~~~~~i~h~dl~   67 (188)
                      +.+++||||+++++.   ....++++||+++++|..++...      .         |++.||.|||+.  .+++|+||+
T Consensus        53 l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~  130 (286)
T cd06622          53 LHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVK  130 (286)
T ss_pred             HHhcCCCcHHhhhhheecCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCC
Confidence            567899999999998   88899999999999999988321      1         899999999961  599999999


Q ss_pred             CCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCCC------------CCccchHHHHHHHHHHHhCCcc
Q 039565           68 STNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTEL------------TEKSDVDSFEIVILEIITGILT  135 (188)
Q Consensus        68 ~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~------------~~~~di~s~G~~l~~~~~g~~p  135 (188)
                      |+||+++.++.++++|||.+......    ......++..|++||.            +.++|+||||+++|++++|..|
T Consensus       131 p~nil~~~~~~~~l~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~p  206 (286)
T cd06622         131 PTNVLVNGNGQVKLCDFGVSGNLVAS----LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYP  206 (286)
T ss_pred             HHHEEECCCCCEEEeecCCcccccCC----ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCC
Confidence            99999999999999999988643211    1222346677888882            5689999999999999999999


Q ss_pred             ccccCC---------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          136 VDLSFK---------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       136 ~~~~~~---------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      |.....               ...+...+..+.+++..||+.+|.+||++++++.
T Consensus       207 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  261 (286)
T cd06622         207 YPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE  261 (286)
T ss_pred             CCCcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence            854221               1233345678899999999999999999999987

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.97  E-value=6e-30  Score=196.92  Aligned_cols=163  Identities=26%  Similarity=0.321  Sum_probs=131.1

Q ss_pred             cccccCCCeeeeccc-----CCccEEEEecCCCCChhhhcC---C-c---c---------cHHHHHHHHhcCCCCCcEEe
Q 039565            6 RNKLTGPLLVELIGK-----QKNNALELGFRGNPELVDQQG---K-E---E---------VCCPGLEYLHQGLKHPIIQR   64 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-----~~~~~lv~e~~~~~~L~~~~~---~-~---~---------~i~~~l~~Lh~~~~~~i~h~   64 (188)
                      +++++||||+++++.     ....+++|||+++++|.+++.   . .   .         |++.||.|||+   .+++|+
T Consensus        53 l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~---~~i~H~  129 (287)
T cd06621          53 NKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHS---RKIIHR  129 (287)
T ss_pred             HHhCCCCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccC
Confidence            567899999999986     446899999999999988761   1 1   1         89999999999   999999


Q ss_pred             CCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccc
Q 039565           65 DMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        65 dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      |++|.||+++.++.++++|||++.......    .....++..|++||      ++.++|+||||+++|++++|..||+.
T Consensus       130 dl~~~nil~~~~~~~~l~dfg~~~~~~~~~----~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~  205 (287)
T cd06621         130 DIKPSNILLTRKGQVKLCDFGVSGELVNSL----AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPP  205 (287)
T ss_pred             CCCHHHEEEecCCeEEEeeccccccccccc----cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCc
Confidence            999999999999999999999876432111    11334566788888      57789999999999999999999875


Q ss_pred             cCCC-----------------C----c--CHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          139 SFKG-----------------E----F--DIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       139 ~~~~-----------------~----~--~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ....                 .    .  ....+..+.+++.+||+.+|.+|||+.++++
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~  265 (287)
T cd06621         206 EGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE  265 (287)
T ss_pred             ccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence            4210                 0    0  0123567889999999999999999999998

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.97  E-value=6e-31  Score=209.78  Aligned_cols=167  Identities=17%  Similarity=0.205  Sum_probs=130.6

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||+++++.   .+..++||||+++|+|.+++.+.+            |++.||+|||+   .+|+||||||+|
T Consensus        55 l~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~N  131 (376)
T cd05598          55 LAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDN  131 (376)
T ss_pred             HHhCCCCCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHH
Confidence            467899999999988   788999999999999999982222            89999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCC-----------------------------------------CCcceeeeccccccc
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEG-----------------------------------------GTHMSTTIAGTAGFL  109 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~-----------------------------------------~~~~~~~~~~~~~~~  109 (188)
                      |+++.++.++|+|||++..+....                                         .........|++.|+
T Consensus       132 ill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  211 (376)
T cd05598         132 ILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYI  211 (376)
T ss_pred             EEECCCCCEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCcccc
Confidence            999999999999999874221000                                         000011246889999


Q ss_pred             CCC------CCCccchHHHHHHHHHHHhCCccccccCCCC---------------cCHHHHHHHHHHHHHccCcCCCCCC
Q 039565          110 NTE------LTEKSDVDSFEIVILEIITGILTVDLSFKGE---------------FDIISVEKAVEIAMASVSSKVNRRP  168 (188)
Q Consensus       110 ~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~~---------------~~~~~~~~~~~l~~~cl~~~p~~Rp  168 (188)
                      |||      ++.++|+|||||++|+|++|..||......+               .....+..+.+++..|+ .+|.+|+
T Consensus       212 aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~  290 (376)
T cd05598         212 APEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRL  290 (376)
T ss_pred             CHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcC
Confidence            999      5788999999999999999999986432111               11123456778888866 4999999


Q ss_pred             ---CHHHHHHH
Q 039565          169 ---LMNQVVMV  176 (188)
Q Consensus       169 ---s~~~i~~~  176 (188)
                         +++++++.
T Consensus       291 ~~~t~~ell~h  301 (376)
T cd05598         291 GKNGADEIKAH  301 (376)
T ss_pred             CCCCHHHHhCC
Confidence               88888763

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.97  E-value=7.7e-30  Score=195.32  Aligned_cols=166  Identities=22%  Similarity=0.290  Sum_probs=135.5

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCcE
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTNI   71 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~ni   71 (188)
                      +.+++||||+++++.   ....++++||+++++|..++....           |++.|+.|||+   .+++|+|++|.||
T Consensus        56 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~Ni  132 (277)
T cd06641          56 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANV  132 (277)
T ss_pred             HHhcCCCCEeEEEEEEEeCCeEEEEEEeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHcc---CCeecCCCCHHhE
Confidence            467899999999988   788999999999999999983222           89999999999   9999999999999


Q ss_pred             EEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC----
Q 039565           72 LLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK----  141 (188)
Q Consensus        72 ll~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~----  141 (188)
                      +++.++.++++|||++.......  .......++..|++||      .+.++|+||||+++|++++|..||.....    
T Consensus       133 ~i~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~  210 (277)
T cd06641         133 LLSEHGEVKLADFGVAGQLTDTQ--IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVL  210 (277)
T ss_pred             EECCCCCEEEeecccceecccch--hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHH
Confidence            99999999999999876542111  1122345667788888      46789999999999999999999864221    


Q ss_pred             --------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          142 --------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       142 --------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                              ...+...+..+.+++..||+.+|.+||++.++++.
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~  253 (277)
T cd06641         211 FLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH  253 (277)
T ss_pred             HHHhcCCCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence                    12233456678999999999999999999999983

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.97  E-value=7.8e-30  Score=193.42  Aligned_cols=168  Identities=23%  Similarity=0.291  Sum_probs=134.7

Q ss_pred             CcccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc---c---------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            5 NRNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE---E---------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~---~---------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      .+.+++|+||+++++.   .+..++++||+++++|.+++.+.   .         +++.|+.|||+   .+++|+|++|.
T Consensus        52 ~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~~~  128 (264)
T cd06626          52 VLELLKHPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHS---HGIVHRDIKPA  128 (264)
T ss_pred             HHHhCCCCChhheeeeEecCCEEEEEEecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHH---CCcccCCCCHH
Confidence            3567899999999998   77889999999999999998332   1         99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcc--eeeecccccccCCC---------CCCccchHHHHHHHHHHHhCCccccc
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHM--STTIAGTAGFLNTE---------LTEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~--~~~~~~~~~~~~pe---------~~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      ||+++.++.++++|||.+...........  .....++..|++||         .+.++|+||||++++++++|..||..
T Consensus       129 nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~  208 (264)
T cd06626         129 NIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSE  208 (264)
T ss_pred             HEEECCCCCEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccC
Confidence            99999999999999998875432211110  11245667888888         46679999999999999999999864


Q ss_pred             cCC-------------CCcCHH--HHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          139 SFK-------------GEFDII--SVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       139 ~~~-------------~~~~~~--~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ...             ...+..  ....+.+++..||+.+|++|||+++++.
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         209 LDNEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ  260 (264)
T ss_pred             CcchHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            311             112222  2667889999999999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.97  E-value=4.4e-30  Score=202.42  Aligned_cols=161  Identities=17%  Similarity=0.199  Sum_probs=127.9

Q ss_pred             cccccCCCeeeeccc---------CCccEEEEecCCCCChhhhcCC--cc---------cHHHHHHHHhcCCCCCcEEeC
Q 039565            6 RNKLTGPLLVELIGK---------QKNNALELGFRGNPELVDQQGK--EE---------VCCPGLEYLHQGLKHPIIQRD   65 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---------~~~~~lv~e~~~~~~L~~~~~~--~~---------~i~~~l~~Lh~~~~~~i~h~d   65 (188)
                      +++++||||++++++         ....+++++++ +++|..++..  ..         |++.||.|||+   .+++|||
T Consensus        68 l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrd  143 (343)
T cd07878          68 LKHMKHENVIGLLDVFTPATSIENFNEVYLVTNLM-GADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHS---AGIIHRD  143 (343)
T ss_pred             HHhcCCCchhhhhhhhcccccccccCcEEEEeecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccc
Confidence            567899999999887         14568999988 5789888732  22         99999999999   9999999


Q ss_pred             CCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccc
Q 039565           66 MKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        66 l~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      |||+||+++.++.+||+|||++.....     ......|+..|+|||       ++.++|+|||||++|+|++|..||..
T Consensus       144 ikp~Nil~~~~~~~kl~Dfg~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  218 (343)
T cd07878         144 LKPSNVAVNEDCELRILDFGLARQADD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPG  218 (343)
T ss_pred             CChhhEEECCCCCEEEcCCccceecCC-----CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence            999999999999999999999875321     123356788899999       36689999999999999999998853


Q ss_pred             cCCC------------C----------------------cCH--------HHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          139 SFKG------------E----------------------FDI--------ISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       139 ~~~~------------~----------------------~~~--------~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ....            .                      .+.        .....+.+++.+|++.+|++|||+.++++
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~  297 (343)
T cd07878         219 NDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA  297 (343)
T ss_pred             CCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            2110            0                      000        01224679999999999999999999986

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.97  E-value=6.6e-30  Score=196.89  Aligned_cols=164  Identities=23%  Similarity=0.220  Sum_probs=129.7

Q ss_pred             ccc-cCCCeeeeccc--------CCccEEEEecCCCCChhhhcCC----c---c---------cHHHHHHHHhcCCCCCc
Q 039565            7 NKL-TGPLLVELIGK--------QKNNALELGFRGNPELVDQQGK----E---E---------VCCPGLEYLHQGLKHPI   61 (188)
Q Consensus         7 ~~l-~Hpniv~~~~~--------~~~~~lv~e~~~~~~L~~~~~~----~---~---------~i~~~l~~Lh~~~~~~i   61 (188)
                      .++ +|||++++++.        ....++++||+++++|.++++.    .   .         |++.||.|||+   .++
T Consensus        73 ~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i  149 (291)
T cd06639          73 QSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHN---NRI  149 (291)
T ss_pred             HHhcCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCe
Confidence            445 79999999987        2358999999999999987621    1   1         89999999999   999


Q ss_pred             EEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-----------CCCccchHHHHHHHHHHH
Q 039565           62 IQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-----------LTEKSDVDSFEIVILEII  130 (188)
Q Consensus        62 ~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-----------~~~~~di~s~G~~l~~~~  130 (188)
                      +|+|++|+||+++.++.++++|||++.......  .......++..|++||           ++.++|+||||+++|+++
T Consensus       150 vH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~  227 (291)
T cd06639         150 IHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTR--LRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELG  227 (291)
T ss_pred             eccCCCHHHEEEcCCCCEEEeecccchhccccc--ccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHh
Confidence            999999999999999999999999887532111  1122345677789998           367899999999999999


Q ss_pred             hCCccccccCCC--------------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          131 TGILTVDLSFKG--------------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       131 ~g~~p~~~~~~~--------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      +|+.||......              ..+......+.+++..||+.+|++||++.++++
T Consensus       228 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~  286 (291)
T cd06639         228 DGDPPLFDMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE  286 (291)
T ss_pred             hCCCCCCCCcHHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            999887532110              112234457899999999999999999999986

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.97  E-value=4.9e-30  Score=193.92  Aligned_cols=165  Identities=21%  Similarity=0.294  Sum_probs=134.5

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc----c---------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE----E---------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~----~---------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +++++||||+++.+.   .+..++++||+++++|.+++ ...    .         |++.|+.|||+   .+++|+|++|
T Consensus        53 l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~l~~  129 (256)
T cd08218          53 LSNMKHPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHD---RKILHRDIKS  129 (256)
T ss_pred             HHhCCCCCeeeeEeeecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCH
Confidence            567899999999988   77899999999999999988 211    1         89999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC-
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK-  141 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~-  141 (188)
                      +||+++.++.++++|||.+.......  .......++..|++||      .+.++|+||||++++++++|..||..... 
T Consensus       130 ~nil~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~  207 (256)
T cd08218         130 QNIFLTKDGTIKLGDFGIARVLNSTV--ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMK  207 (256)
T ss_pred             HHEEEcCCCCEEEeeccceeecCcch--hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHH
Confidence            99999999999999999887543111  1122234667788888      46789999999999999999988854321 


Q ss_pred             -----------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 -----------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 -----------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                 ...+......+.+++.+||+.+|.+||+++++++
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~  252 (256)
T cd08218         208 NLVLKIIRGSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE  252 (256)
T ss_pred             HHHHHHhcCCCCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence                       1123344667899999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.96  E-value=8.2e-30  Score=192.41  Aligned_cols=168  Identities=23%  Similarity=0.284  Sum_probs=134.8

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CC----cc---------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GK----EE---------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~----~~---------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +.+++||||++++++   .+..+++|||+++++|.+++ ..    ..         |++.|+.|||+   .+++|+|++|
T Consensus        55 l~~l~~~~i~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~---~~~~h~dl~~  131 (258)
T smart00219       55 MRKLDHPNIVKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLES---KNFIHRDLAA  131 (258)
T ss_pred             HHhcCCCchheEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhc---CCeeeccccc
Confidence            456799999999998   67899999999999999998 22    22         89999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCC
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFK  141 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~  141 (188)
                      +||+++.++.++++|||.+......... ......++..|++||      .+.++|+||+|++++++++ |..||+....
T Consensus       132 ~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~  210 (258)
T smart00219      132 RNCLVGENLVVKISDFGLSRDLYDDDYY-KKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN  210 (258)
T ss_pred             ceEEEccCCeEEEcccCCceeccccccc-ccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence            9999999999999999998754322111 111223567788888      5788999999999999998 7777753211


Q ss_pred             ------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHH
Q 039565          142 ------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVR  177 (188)
Q Consensus       142 ------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l  177 (188)
                                  ...+...+..+.+++.+|+..+|++|||+.++++.|
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      211 EEVLEYLKKGYRLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             HHHHHHHhcCCCCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence                        122233567899999999999999999999999864

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.96  E-value=5.3e-30  Score=196.52  Aligned_cols=161  Identities=24%  Similarity=0.280  Sum_probs=129.0

Q ss_pred             cCCCeeeeccc---------CCccEEEEecCCCCChhhhcCC-c-c------------cHHHHHHHHhcCCCCCcEEeCC
Q 039565           10 TGPLLVELIGK---------QKNNALELGFRGNPELVDQQGK-E-E------------VCCPGLEYLHQGLKHPIIQRDM   66 (188)
Q Consensus        10 ~Hpniv~~~~~---------~~~~~lv~e~~~~~~L~~~~~~-~-~------------~i~~~l~~Lh~~~~~~i~h~dl   66 (188)
                      +||||+++++.         ....+++|||+++++|.+++.. . .            |++.|+.|||+   .+++|+|+
T Consensus        71 ~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dl  147 (282)
T cd06636          71 HHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHA---HKVIHRDI  147 (282)
T ss_pred             CCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCC
Confidence            69999999888         2467899999999999998822 1 1            89999999999   99999999


Q ss_pred             CCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-----------CCCccchHHHHHHHHHHHhCCcc
Q 039565           67 KSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-----------LTEKSDVDSFEIVILEIITGILT  135 (188)
Q Consensus        67 ~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-----------~~~~~di~s~G~~l~~~~~g~~p  135 (188)
                      +|+||+++.++.++++|||.+......  ........++..|++||           ++.++|+||||+++|++++|..|
T Consensus       148 ~~~nili~~~~~~~l~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p  225 (282)
T cd06636         148 KGQNVLLTENAEVKLVDFGVSAQLDRT--VGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPP  225 (282)
T ss_pred             CHHHEEECCCCCEEEeeCcchhhhhcc--ccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCC
Confidence            999999999999999999987643211  11223456777889988           24479999999999999999999


Q ss_pred             ccccCC-------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          136 VDLSFK-------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       136 ~~~~~~-------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      |.....             .......+..+.+++..||+.+|.+||++.+|++
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~  278 (282)
T cd06636         226 LCDMHPMRALFLIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK  278 (282)
T ss_pred             ccccCHHhhhhhHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence            854221             0111234668999999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.96  E-value=7.1e-30  Score=192.84  Aligned_cols=164  Identities=20%  Similarity=0.321  Sum_probs=133.5

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc----c---------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE----E---------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~----~---------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +++++||||+++++.   .+..++++||+++++|.+++ ...    .         +++.|+.|||+   .+++|+|++|
T Consensus        53 l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~  129 (256)
T cd08220          53 LKLLSHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHT---KLILHRDLKT  129 (256)
T ss_pred             HhhCCCCchhheeeeEecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCH
Confidence            567899999999988   77889999999999999998 221    1         89999999999   9999999999


Q ss_pred             CcEEEccC-CceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC
Q 039565           69 TNILLNEK-VQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK  141 (188)
Q Consensus        69 ~nill~~~-~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~  141 (188)
                      .||+++.+ +.++++|||.+......   .......++..|++||      .+.++|+||||+++|++++|..||+....
T Consensus       130 ~nil~~~~~~~~~l~d~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~  206 (256)
T cd08220         130 QNILLDKHKMVVKIGDFGISKILSSK---SKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANL  206 (256)
T ss_pred             HHEEEcCCCCEEEEccCCCceecCCC---ccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCch
Confidence            99999865 46799999988754321   1122345777899999      47789999999999999999998865321


Q ss_pred             ------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 ------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 ------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                  ...+...+..+.+++.+||+.+|++|||++++++
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~  252 (256)
T cd08220         207 PALVLKIMSGTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA  252 (256)
T ss_pred             HHHHHHHHhcCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence                        1122335667899999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.96  E-value=6e-30  Score=196.88  Aligned_cols=165  Identities=19%  Similarity=0.232  Sum_probs=134.0

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCcE
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTNI   71 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~ni   71 (188)
                      +..++||||+++++.   .+..++++||+++++|.+++....           |++.|++|||+   .+++|+|++|+||
T Consensus        70 l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~dl~p~Ni  146 (285)
T cd06648          70 MRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLAVLKALSFLHA---QGVIHRDIKSDSI  146 (285)
T ss_pred             HHHcCCCChheEEEEEEcCCeEEEEEeccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChhhE
Confidence            456789999999997   788999999999999999983222           89999999999   9999999999999


Q ss_pred             EEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC----
Q 039565           72 LLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK----  141 (188)
Q Consensus        72 ll~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~----  141 (188)
                      +++.++.++++|||.+......  ........|+..|++||      ++.++|+||||+++|++++|..||.....    
T Consensus       147 l~~~~~~~~l~d~g~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~  224 (285)
T cd06648         147 LLTSDGRVKLSDFGFCAQVSKE--VPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAM  224 (285)
T ss_pred             EEcCCCcEEEcccccchhhccC--CcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHH
Confidence            9999999999999987643211  11222345778899998      57789999999999999999988753211    


Q ss_pred             --------CC--cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 --------GE--FDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 --------~~--~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                              ..  .....+..+.+++.+||+.+|++|||+.++++
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~  268 (285)
T cd06648         225 KRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLN  268 (285)
T ss_pred             HHHHhcCCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence                    01  11124568999999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.96  E-value=4.2e-30  Score=195.37  Aligned_cols=169  Identities=21%  Similarity=0.201  Sum_probs=133.1

Q ss_pred             cccccCCC-eeeeccc---CC------ccEEEEecCCCCChhhhc-CCc----c-----------cHHHHHHHHhcCCCC
Q 039565            6 RNKLTGPL-LVELIGK---QK------NNALELGFRGNPELVDQQ-GKE----E-----------VCCPGLEYLHQGLKH   59 (188)
Q Consensus         6 l~~l~Hpn-iv~~~~~---~~------~~~lv~e~~~~~~L~~~~-~~~----~-----------~i~~~l~~Lh~~~~~   59 (188)
                      |.+++|+| |++++++   .+      .+++|+||++. +|..++ ...    +           |++.||+|||+   +
T Consensus        64 lk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~---~  139 (323)
T KOG0594|consen   64 LKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHS---H  139 (323)
T ss_pred             HHHhCCCcceEEEEeeeeecccccccceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHh---C
Confidence            56789999 9999999   33      78899999984 899999 222    2           99999999999   9


Q ss_pred             CcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhC
Q 039565           60 PIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITG  132 (188)
Q Consensus        60 ~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g  132 (188)
                      +|+||||||+||++++.|.+|++|||+++....+...  -....+|.+|.+||       ++...||||+||++.||+++
T Consensus       140 ~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~--yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~  217 (323)
T KOG0594|consen  140 GILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMRT--YTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTR  217 (323)
T ss_pred             CeecccCCcceEEECCCCcEeeeccchHHHhcCCccc--ccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhC
Confidence            9999999999999999999999999999865433222  33345667789998       78999999999999999999


Q ss_pred             CccccccC-------------------C-------------------CCcCHHHH---HHHHHHHHHccCcCCCCCCCHH
Q 039565          133 ILTVDLSF-------------------K-------------------GEFDIISV---EKAVEIAMASVSSKVNRRPLMN  171 (188)
Q Consensus       133 ~~p~~~~~-------------------~-------------------~~~~~~~~---~~~~~l~~~cl~~~p~~Rps~~  171 (188)
                      +..|+...                   +                   ........   ....+++.+|++.+|.+|.|++
T Consensus       218 ~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~  297 (323)
T KOG0594|consen  218 RPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAK  297 (323)
T ss_pred             CCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHH
Confidence            87552110                   0                   00111111   3678999999999999999999


Q ss_pred             HHHHH--Hhhc
Q 039565          172 QVVMV--REQG  180 (188)
Q Consensus       172 ~i~~~--l~~~  180 (188)
                      ..+++  +...
T Consensus       298 ~al~h~yf~~~  308 (323)
T KOG0594|consen  298 GALTHPYFSEL  308 (323)
T ss_pred             HHhcChhhccc
Confidence            99885  5444

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.96  E-value=5.4e-30  Score=193.55  Aligned_cols=164  Identities=23%  Similarity=0.299  Sum_probs=134.4

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-c--c---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-E--E---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~--~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||+++++.   ....++++||+++++|.+++.+ .  .         |++.|+.|||+   .+++|+|++|+|
T Consensus        56 l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~~~n  132 (258)
T cd06632          56 LSKLQHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHD---RNTVHRDIKGAN  132 (258)
T ss_pred             HHhcCCCCchheeeeEecCCeEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHH
Confidence            467899999999998   7788999999999999999822 2  1         89999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCC--
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFK--  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~--  141 (188)
                      |+++.++.+|++|||.+.......   ......++..|++||       ++.++|+||||+++|++++|..||+....  
T Consensus       133 i~~~~~~~~kl~d~~~~~~~~~~~---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~  209 (258)
T cd06632         133 ILVDTNGVVKLADFGMAKQVVEFS---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVA  209 (258)
T ss_pred             EEECCCCCEEEccCccceeccccc---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHH
Confidence            999999999999999876532111   223345677788888       46679999999999999999999865321  


Q ss_pred             -----------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 -----------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 -----------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                 ...+......+.+++.+||+.+|.+||++++++.
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  254 (258)
T cd06632         210 AVFKIGRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE  254 (258)
T ss_pred             HHHHHHhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence                       1122334567889999999999999999999975

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.96  E-value=1.1e-30  Score=209.75  Aligned_cols=164  Identities=24%  Similarity=0.323  Sum_probs=144.5

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      |..++|||||+++++   ...+++||||+.+|.+.+++.+.+            |+..|++|||+   ..++|||||++|
T Consensus       109 mk~l~HPnIvkl~~v~~t~~~lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~---k~ivHrdLk~eN  185 (596)
T KOG0586|consen  109 MKSLNHPNIVKLFSVIETEATLYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHS---KNIVHRDLKAEN  185 (596)
T ss_pred             HHhcCCcceeeeeeeeeecceeEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhh---cceeccccchhh
Confidence            677999999999999   899999999999999999993333            99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCCCC
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFKGE  143 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~~  143 (188)
                      ++++.+..+||+|||++..+.   ......+++|++.|.+||       ..+++|+||+|+++|.++.|.+|||.....+
T Consensus       186 ilL~~~mnikIaDfgfS~~~~---~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~  262 (596)
T KOG0586|consen  186 ILLDENMNIKIADFGFSTFFD---YGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKE  262 (596)
T ss_pred             cccccccceeeeccccceeec---ccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccccc
Confidence            999999999999999998654   334566789999999999       4789999999999999999999999765544


Q ss_pred             -----------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          144 -----------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       144 -----------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                 .+......+.+++...+..+|.+|++.++|-+
T Consensus       263 Lr~rvl~gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~  305 (596)
T KOG0586|consen  263 LRPRVLRGKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMK  305 (596)
T ss_pred             ccchheeeeecccceeechhHHHHHHhhccCccccCCHHHhhh
Confidence                       33445668889999999999999999999865

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=4.9e-30  Score=195.32  Aligned_cols=165  Identities=25%  Similarity=0.325  Sum_probs=130.7

Q ss_pred             cccc-cCCCeeeeccc---CC------ccEEEEecCCCCChhhhc-CCc----c-----------cHHHHHHHHhcCCCC
Q 039565            6 RNKL-TGPLLVELIGK---QK------NNALELGFRGNPELVDQQ-GKE----E-----------VCCPGLEYLHQGLKH   59 (188)
Q Consensus         6 l~~l-~Hpniv~~~~~---~~------~~~lv~e~~~~~~L~~~~-~~~----~-----------~i~~~l~~Lh~~~~~   59 (188)
                      ++++ +||||++++++   ..      ..++++||+++++|.+++ ...    .           |++.||.|||+   .
T Consensus        56 l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~---~  132 (275)
T cd06608          56 LRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHE---N  132 (275)
T ss_pred             HHHhcCCCChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhc---C
Confidence            3455 69999999998   22      379999999999999987 211    1           89999999999   9


Q ss_pred             CcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-----------CCCccchHHHHHHHHH
Q 039565           60 PIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-----------LTEKSDVDSFEIVILE  128 (188)
Q Consensus        60 ~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-----------~~~~~di~s~G~~l~~  128 (188)
                      +++|+|++|+||+++.++.++++|||.+.....  .........++..|++||           ++.++|+||||+++|+
T Consensus       133 ~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~  210 (275)
T cd06608         133 KVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDS--TLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIE  210 (275)
T ss_pred             CcccCCCCHHHEEEccCCeEEECCCccceeccc--chhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHH
Confidence            999999999999999999999999998764321  112223345777888888           3567999999999999


Q ss_pred             HHhCCccccccCC--------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          129 IITGILTVDLSFK--------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       129 ~~~g~~p~~~~~~--------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      +++|..||.....              ...+...+..+.+++.+||..+|++|||++++++
T Consensus       211 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~  271 (275)
T cd06608         211 LADGKPPLCDMHPMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE  271 (275)
T ss_pred             HHhCCCCccccchHHHHHHhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            9999999864221              0111224568899999999999999999999986

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.96  E-value=4.5e-30  Score=197.59  Aligned_cols=164  Identities=22%  Similarity=0.233  Sum_probs=133.3

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc--c-----------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE--E-----------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~--~-----------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +.+++|+||+++.+.   .+..++++||+.+++|..++ ...  .           |++.||.|||+   .+++|+|++|
T Consensus        54 l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~---~~iiH~dikp  130 (285)
T cd05632          54 LEKVNSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHR---ENTVYRDLKP  130 (285)
T ss_pred             HHHcCCcCceeEEEEEecCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCH
Confidence            567899999999877   77889999999999999887 211  1           99999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC-
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK-  141 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~-  141 (188)
                      .||+++.++.++++|||++......   .......|+..|++||      ++.++|+||||+++|++++|..||..... 
T Consensus       131 ~Nili~~~~~~kl~Dfg~~~~~~~~---~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~  207 (285)
T cd05632         131 ENILLDDYGHIRISDLGLAVKIPEG---ESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEK  207 (285)
T ss_pred             HHEEECCCCCEEEecCCcceecCCC---CcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH
Confidence            9999999999999999988653211   1122346788899999      57789999999999999999999864321 


Q ss_pred             --------------CCcCHHHHHHHHHHHHHccCcCCCCCCC-----HHHHHH
Q 039565          142 --------------GEFDIISVEKAVEIAMASVSSKVNRRPL-----MNQVVM  175 (188)
Q Consensus       142 --------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~i~~  175 (188)
                                    ..++...+..+.+++..|++.+|++||+     +++++.
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05632         208 VKREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR  260 (285)
T ss_pred             HHHHHHHHhhhccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence                          1122334567889999999999999999     677776

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.96  E-value=7.8e-30  Score=193.54  Aligned_cols=164  Identities=23%  Similarity=0.257  Sum_probs=135.1

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc-c-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE-E-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~-~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||+++++.   +...++++||+++++|.+++.+. .           |++.||.|||+   .+++|+|++|.|
T Consensus        47 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~~~h~dl~~~n  123 (262)
T cd05572          47 LEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHN---RGIIYRDLKPEN  123 (262)
T ss_pred             HHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHH
Confidence            467899999999988   78899999999999999998322 1           89999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC---
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK---  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~---  141 (188)
                      |+++.++.++++|||.+.......   ......++..|++||      ++.++|+||||+++|++++|..||.....   
T Consensus       124 ilv~~~~~~~l~df~~~~~~~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~  200 (262)
T cd05572         124 LLLDSNGYVKLVDFGFAKKLKSGQ---KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPM  200 (262)
T ss_pred             EEEcCCCCEEEeeCCcccccCccc---ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHH
Confidence            999999999999999887543211   222345677899998      47789999999999999999999864431   


Q ss_pred             ------------CCcCHHHHHHHHHHHHHccCcCCCCCCC-----HHHHHH
Q 039565          142 ------------GEFDIISVEKAVEIAMASVSSKVNRRPL-----MNQVVM  175 (188)
Q Consensus       142 ------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~i~~  175 (188)
                                  ...+...+..+.+++.+||+.+|++||+     +.++++
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~  251 (262)
T cd05572         201 EIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK  251 (262)
T ss_pred             HHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence                        1122233578899999999999999999     777776

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.96  E-value=4.6e-30  Score=219.48  Aligned_cols=174  Identities=17%  Similarity=0.230  Sum_probs=137.1

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc-----------------------ccHHHHHHHHhcCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE-----------------------EVCCPGLEYLHQGLKH   59 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~-----------------------~~i~~~l~~Lh~~~~~   59 (188)
                      +++++||||++++++   .+..+++|||+++++|.+++.+.                       .|++.||+|||+   .
T Consensus        56 Ls~L~HPNIVkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs---~  132 (932)
T PRK13184         56 AADLIHPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHS---K  132 (932)
T ss_pred             HHhCCCcCcCeEEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHH---C
Confidence            467899999999998   77889999999999999887210                       089999999999   9


Q ss_pred             CcEEeCCCCCcEEEccCCceEEecccCcccccCCCCC----------------cceeeecccccccCCC------CCCcc
Q 039565           60 PIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGT----------------HMSTTIAGTAGFLNTE------LTEKS  117 (188)
Q Consensus        60 ~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~pe------~~~~~  117 (188)
                      +++|||+||+||+++.++.++++|||+++........                .......|++.|+|||      .+.++
T Consensus       133 GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kS  212 (932)
T PRK13184        133 GVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASEST  212 (932)
T ss_pred             CccccCCchheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHh
Confidence            9999999999999999999999999998754111000                0111246899999999      57889


Q ss_pred             chHHHHHHHHHHHhCCccccccCCCCc--------------CHHHHHHHHHHHHHccCcCCCCCC-CHHHHHHHHhhccC
Q 039565          118 DVDSFEIVILEIITGILTVDLSFKGEF--------------DIISVEKAVEIAMASVSSKVNRRP-LMNQVVMVREQGSG  182 (188)
Q Consensus       118 di~s~G~~l~~~~~g~~p~~~~~~~~~--------------~~~~~~~~~~l~~~cl~~~p~~Rp-s~~~i~~~l~~~~~  182 (188)
                      |+|||||++|+|++|..||........              ....+..+.+++.+|++.+|++|| +++++.+.|+....
T Consensus       213 DIWSLGVILyELLTG~~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq  292 (932)
T PRK13184        213 DIYALGVILYQMLTLSFPYRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ  292 (932)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            999999999999999999864322110              012345688999999999999997 57778777766533

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.96  E-value=6.6e-30  Score=196.96  Aligned_cols=162  Identities=25%  Similarity=0.328  Sum_probs=133.8

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-cc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-EE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +++++||||+++++.   ....++++||+++++|.+++.+ ..           |++.||.|||+   .+++|+|++|.|
T Consensus        55 l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~---~~i~H~dl~p~n  131 (290)
T cd05580          55 LQSIRHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHS---LDIVYRDLKPEN  131 (290)
T ss_pred             HHhCCCCCccceeeEEEcCCeEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHH
Confidence            567889999999998   7788999999999999999822 22           89999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC---
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK---  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~---  141 (188)
                      |+++.++.++++|||++......     .....++..|++||      .+.++|+||||+++|++++|..||.....   
T Consensus       132 ili~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~  206 (290)
T cd05580         132 LLLDSDGYIKITDFGFAKRVKGR-----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQI  206 (290)
T ss_pred             EEECCCCCEEEeeCCCccccCCC-----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            99999999999999988754311     22345778899998      36789999999999999999999864321   


Q ss_pred             --------CCcCHHHHHHHHHHHHHccCcCCCCCC-----CHHHHHH
Q 039565          142 --------GEFDIISVEKAVEIAMASVSSKVNRRP-----LMNQVVM  175 (188)
Q Consensus       142 --------~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~i~~  175 (188)
                              ...+...+..+.+++..||..+|.+|+     +++++++
T Consensus       207 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~  253 (290)
T cd05580         207 YEKILEGKVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN  253 (290)
T ss_pred             HHHHhcCCccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence                    112333467889999999999999999     7777764

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.96  E-value=1.3e-29  Score=196.85  Aligned_cols=161  Identities=24%  Similarity=0.252  Sum_probs=130.4

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcC--Ccc-----------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQG--KEE-----------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~--~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +++++||||+++.++   ....++++||+. |++.+++.  ...           |++.||.|||+   .+++|+|++|.
T Consensus        69 l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~---~~i~H~dl~p~  144 (307)
T cd06607          69 LQQLRHPNTIEYKGCYLREHTAWLVMEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHS---HERIHRDIKAG  144 (307)
T ss_pred             HHhCCCCCEEEEEEEEEeCCeEEEEHHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcc
Confidence            567899999999998   778899999998 57767662  111           89999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC---------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE---------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe---------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      ||+++.++.++++|||++.....      .....++..|++||         ++.++|+||||+++|++++|..||....
T Consensus       145 nIl~~~~~~~kL~dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~  218 (307)
T cd06607         145 NILLTEPGTVKLADFGSASLVSP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN  218 (307)
T ss_pred             cEEECCCCCEEEeecCcceecCC------CCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCcc
Confidence            99999999999999998865321      12345667788888         3568999999999999999998875321


Q ss_pred             -------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          141 -------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       141 -------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                                   ........+..+.+++..||+.+|++||++.+|+..
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  267 (307)
T cd06607         219 AMSALYHIAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH  267 (307)
T ss_pred             HHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence                         111123456789999999999999999999999873

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.96  E-value=8.4e-30  Score=193.39  Aligned_cols=167  Identities=25%  Similarity=0.327  Sum_probs=135.5

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CC-c----c---------cHHHHHHHHhcCCCCCcEEeCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GK-E----E---------VCCPGLEYLHQGLKHPIIQRDMK   67 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~-~----~---------~i~~~l~~Lh~~~~~~i~h~dl~   67 (188)
                      ++.++|+||+++++.   .+..++++|++++++|.+++ .. .    .         |++.|++|||+   .+++|+|++
T Consensus        53 l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~---~~i~h~~l~  129 (267)
T cd06610          53 MSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHS---NGQIHRDIK  129 (267)
T ss_pred             HHhcCCCCEEEEEEEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCC
Confidence            567899999999988   88899999999999999998 21 1    1         89999999999   999999999


Q ss_pred             CCcEEEccCCceEEecccCcccccCCCCC--cceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccc
Q 039565           68 STNILLNEKVQAKLADFGQSRISPVEGGT--HMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        68 ~~nill~~~~~~kl~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      |+||++++++.++++|||++.........  .......++..|++||       .+.++|+||||+++|+|++|..||..
T Consensus       130 p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~  209 (267)
T cd06610         130 AGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSK  209 (267)
T ss_pred             HHhEEEcCCCCEEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccc
Confidence            99999999999999999988754322221  1223346778899998       46679999999999999999999864


Q ss_pred             cCCCC------------cC-----HHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          139 SFKGE------------FD-----IISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       139 ~~~~~------------~~-----~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      .....            ..     ...+..+.+++..||+.+|++||+++++++
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~  263 (267)
T cd06610         210 YPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK  263 (267)
T ss_pred             cChhhhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            32110            10     134577899999999999999999999986

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.96  E-value=3.3e-30  Score=201.75  Aligned_cols=156  Identities=21%  Similarity=0.308  Sum_probs=126.9

Q ss_pred             cCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-c--c---------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEc
Q 039565           10 TGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-E--E---------VCCPGLEYLHQGLKHPIIQRDMKSTNILLN   74 (188)
Q Consensus        10 ~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~--~---------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~   74 (188)
                      +|++|+++.++   .+..++||||+++|+|..++.+ .  .         |++.||.|||+   .+++|||+||+||+++
T Consensus        59 ~~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~---~~ivHrDikp~Nill~  135 (323)
T cd05615          59 KPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHR---RGIIYRDLKLDNVMLD  135 (323)
T ss_pred             CCCchhheeeEEecCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEEC
Confidence            46778888877   6789999999999999998822 2  1         99999999999   9999999999999999


Q ss_pred             cCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC-------
Q 039565           75 EKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK-------  141 (188)
Q Consensus        75 ~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~-------  141 (188)
                      .++.++|+|||++.....  .........|+..|+|||      ++.++|+||||+++|+|++|..||.....       
T Consensus       136 ~~~~ikL~Dfg~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i  213 (323)
T cd05615         136 SEGHIKIADFGMCKEHMV--DGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSI  213 (323)
T ss_pred             CCCCEEEeccccccccCC--CCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            999999999998874321  111233456888999999      57889999999999999999999865321       


Q ss_pred             ----CCcCHHHHHHHHHHHHHccCcCCCCCCCH
Q 039565          142 ----GEFDIISVEKAVEIAMASVSSKVNRRPLM  170 (188)
Q Consensus       142 ----~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  170 (188)
                          ...+...+..+.+++..|++.+|.+|++.
T Consensus       214 ~~~~~~~p~~~~~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05615         214 MEHNVSYPKSLSKEAVSICKGLMTKHPSKRLGC  246 (323)
T ss_pred             HhCCCCCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence                11233456678899999999999999974

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.96  E-value=1.1e-29  Score=193.73  Aligned_cols=157  Identities=22%  Similarity=0.318  Sum_probs=130.4

Q ss_pred             cCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc-c-----------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEc
Q 039565           10 TGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE-E-----------VCCPGLEYLHQGLKHPIIQRDMKSTNILLN   74 (188)
Q Consensus        10 ~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~-~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~   74 (188)
                      +||||+++++.   .+..+++|||+++++|.+++.+. .           |++.||.|||+   .+++|+|++|+||+++
T Consensus        67 ~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~  143 (267)
T PHA03390         67 DNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHK---HNIIHNDIKLENVLYD  143 (267)
T ss_pred             cCCCEEEEEEEEecCCeeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEe
Confidence            69999999988   78899999999999999999222 2           99999999999   8999999999999999


Q ss_pred             cCC-ceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCCC----
Q 039565           75 EKV-QAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKGE----  143 (188)
Q Consensus        75 ~~~-~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~~----  143 (188)
                      .++ .++++|||.+.....      .....++..|++||      ++.++|+||||+++|++++|..||......+    
T Consensus       144 ~~~~~~~l~dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~  217 (267)
T PHA03390        144 RAKDRIYLCDYGLCKIIGT------PSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLE  217 (267)
T ss_pred             CCCCeEEEecCccceecCC------CccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHH
Confidence            988 999999998765321      11235677889998      5778999999999999999999986432221    


Q ss_pred             -----------cCHHHHHHHHHHHHHccCcCCCCCCC-HHHHHH
Q 039565          144 -----------FDIISVEKAVEIAMASVSSKVNRRPL-MNQVVM  175 (188)
Q Consensus       144 -----------~~~~~~~~~~~l~~~cl~~~p~~Rps-~~~i~~  175 (188)
                                 .....+..+.+++..||+.+|.+||+ ++++++
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~  261 (267)
T PHA03390        218 SLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK  261 (267)
T ss_pred             HHHHhhcccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence                       12235678899999999999999996 688874

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.96  E-value=4.4e-30  Score=199.31  Aligned_cols=171  Identities=19%  Similarity=0.275  Sum_probs=132.8

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-cc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-EE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +..++||||+++++.   +...++++||+++++|.+++.. ..           |++.||.|||+   .+++|+|++|.|
T Consensus        55 l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~N  131 (305)
T cd05609          55 LTFAENPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHN---YGIVHRDLKPDN  131 (305)
T ss_pred             HHhCCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHH
Confidence            456889999999988   6778999999999999999822 21           88999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCC-------------CCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEG-------------GTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT  131 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~  131 (188)
                      |+++.++.++++|||.++......             .........++..|++||      ++.++|+||||+++|++++
T Consensus       132 Ill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~  211 (305)
T cd05609         132 LLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLV  211 (305)
T ss_pred             EEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHh
Confidence            999999999999999876311000             000111234667789998      5788999999999999999


Q ss_pred             CCccccccCCCC-----------c---CHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhh
Q 039565          132 GILTVDLSFKGE-----------F---DIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQ  179 (188)
Q Consensus       132 g~~p~~~~~~~~-----------~---~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~  179 (188)
                      |..||......+           .   ....+..+.+++..||+.+|++||++.++.+.|+.
T Consensus       212 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~  273 (305)
T cd05609         212 GCVPFFGDTPEELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH  273 (305)
T ss_pred             CCCCCCCCCHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence            999885432111           0   11245678999999999999999997666666554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.96  E-value=2.8e-30  Score=198.18  Aligned_cols=165  Identities=24%  Similarity=0.282  Sum_probs=131.3

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc---c---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE---E---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~---~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++   +...++++||+++++|..+....   .         |++.||+|||+   .+++|+|++|+|
T Consensus        54 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~h~~l~p~n  130 (286)
T cd07846          54 LKQLRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHS---HNIIHRDIKPEN  130 (286)
T ss_pred             HHhcCCcchhhHHHhcccCCeEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHH
Confidence            467889999999999   77899999999998888877221   1         99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCCCC
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFKGE  143 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~~  143 (188)
                      |+++.++.++++|||++.......  .......++..|++||       ++.++|+||||+++|++++|..||......+
T Consensus       131 i~~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~  208 (286)
T cd07846         131 ILVSQSGVVKLCDFGFARTLAAPG--EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDID  208 (286)
T ss_pred             EEECCCCcEEEEeeeeeeeccCCc--cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHH
Confidence            999999999999999887543211  1222345677788998       3567999999999999999998774221100


Q ss_pred             ---------------------------------c---------CHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          144 ---------------------------------F---------DIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       144 ---------------------------------~---------~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                                       .         ....+..+.+++..||+.+|++||++.++++
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  282 (286)
T cd07846         209 QLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH  282 (286)
T ss_pred             HHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence                                             0         0122456889999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.96  E-value=1.5e-29  Score=192.36  Aligned_cols=166  Identities=19%  Similarity=0.228  Sum_probs=132.3

Q ss_pred             cccccCCCeeeeccc-----CCccEEEEecCCCCChhhhcCC-c--c---------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK-----QKNNALELGFRGNPELVDQQGK-E--E---------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-----~~~~~lv~e~~~~~~L~~~~~~-~--~---------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +.+++||||++++++     ....++++||+++++|.+++.+ .  .         |++.||.|||+   .+++|+|++|
T Consensus        58 l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p  134 (265)
T cd06652          58 LKNLLHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHS---NMIVHRDIKG  134 (265)
T ss_pred             HHhcCCCCeeeEEeEeccCCCceEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCH
Confidence            567899999999997     2457799999999999999822 1  1         89999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCC-CcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCcccccc--
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGG-THMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLS--  139 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~--  139 (188)
                      +||+++.++.++++|||.+........ ........++..|++||      .+.++|+||||+++|++++|..||...  
T Consensus       135 ~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~  214 (265)
T cd06652         135 ANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEA  214 (265)
T ss_pred             HHEEecCCCCEEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccch
Confidence            999999999999999998875321111 11122345777899999      467899999999999999999998531  


Q ss_pred             -----------CCCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          140 -----------FKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       140 -----------~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                 .....+......+.+++..|+. +|++||++++|++
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~  260 (265)
T cd06652         215 MAAIFKIATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR  260 (265)
T ss_pred             HHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence                       1122444566778899999995 8999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.96  E-value=1.5e-29  Score=200.49  Aligned_cols=165  Identities=23%  Similarity=0.267  Sum_probs=141.5

Q ss_pred             ccccc-CCCeeeeccc---CCccEEEEecCCCCChhhhc-CC-cc---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLT-GPLLVELIGK---QKNNALELGFRGNPELVDQQ-GK-EE---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~-Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~-~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      |.++. |||||++.+.   ....++|||++.+|.|.+.+ .. ..         |++.|+.|||+   .+++|||+||+|
T Consensus        89 l~~l~~hpniv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~---~gvvHrDlKpEN  165 (382)
T KOG0032|consen   89 LQQLSGHPNIVQLKDAFEDPDSVYLVMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHS---LGVVHRDLKPEN  165 (382)
T ss_pred             HHhccCCCCEEEEEEEEEcCCeEEEEEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHh---CCceeccCCHHH
Confidence            55677 9999999999   78889999999999999999 43 33         99999999999   999999999999


Q ss_pred             EEEccC----CceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           71 ILLNEK----VQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        71 ill~~~----~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      +++...    +.+|++|||++.....   .......+|++.|+|||      ++..+|+||+|+++|.|++|..||....
T Consensus       166 ~L~~~~~~~~~~ik~~DFGla~~~~~---~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~  242 (382)
T KOG0032|consen  166 LLLASKDEGSGRIKLIDFGLAKFIKP---GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGET  242 (382)
T ss_pred             eeeccccCCCCcEEEeeCCCceEccC---CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCC
Confidence            999643    4799999999986542   44566789999999999      6889999999999999999999996543


Q ss_pred             ---------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          141 ---------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       141 ---------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                                     ..+.-...+..+.+++..++..||.+|+|+.++++.
T Consensus       243 ~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H  293 (382)
T KOG0032|consen  243 EFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH  293 (382)
T ss_pred             hhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence                           112223457789999999999999999999999984

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.96  E-value=8.1e-30  Score=195.70  Aligned_cols=166  Identities=20%  Similarity=0.203  Sum_probs=131.6

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-cc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-EE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +++++||||++++++   .+..++++||++++.+..+..+ ..           |++.|+.|||+   .+++|+|++|+|
T Consensus        54 l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~n  130 (288)
T cd07833          54 LRQLRHENIVNLKEAFRRKGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHS---HNIIHRDIKPEN  130 (288)
T ss_pred             HHhcCCCCeeehhheEEECCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHH
Confidence            457889999999999   7789999999998777665532 21           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCC--
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFK--  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~--  141 (188)
                      |+++.++.++++|||.+........ .......++..|++||       .+.++|+||||+++|++++|..||.....  
T Consensus       131 i~~~~~~~~kl~d~g~~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~  209 (288)
T cd07833         131 ILVSESGVLKLCDFGFARALRARPA-SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDID  209 (288)
T ss_pred             eEECCCCCEEEEeeecccccCCCcc-ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            9999999999999999875432211 1223345677889998       45789999999999999999988753210  


Q ss_pred             --------------------------------C---------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 --------------------------------G---------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 --------------------------------~---------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                                      .         .++...+..+.+++..||+.+|++|||++++++
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  284 (288)
T cd07833         210 QLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ  284 (288)
T ss_pred             HHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence                                            0         011123677899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.96  E-value=1.3e-29  Score=198.60  Aligned_cols=166  Identities=16%  Similarity=0.143  Sum_probs=128.6

Q ss_pred             ccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc-----c---------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            7 NKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE-----E---------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         7 ~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~-----~---------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      ..++||||++++++   .+..++++||+.+++|.+++.+.     .         |++.||+|||+   .+++|||+||+
T Consensus        54 ~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivHrDlkp~  130 (328)
T cd08226          54 HFFRHPNIMTSWTVFTTGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQ---NGYIHRNIKAS  130 (328)
T ss_pred             HhCCCCCcceEeeeEecCCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHH
Confidence            34789999999999   78889999999999999988321     1         99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcc-----eeeecccccccCCC--------CCCccchHHHHHHHHHHHhCCccc
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHM-----STTIAGTAGFLNTE--------LTEKSDVDSFEIVILEIITGILTV  136 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~-----~~~~~~~~~~~~pe--------~~~~~di~s~G~~l~~~~~g~~p~  136 (188)
                      ||+++.++.+++.||+.............     .....++..|++||        ++.++|+||||+++|++++|..||
T Consensus       131 Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~  210 (328)
T cd08226         131 HILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPF  210 (328)
T ss_pred             HEEEeCCCcEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence            99999999999999875432211111100     11123445688998        357899999999999999999988


Q ss_pred             cccCC----------------------------------------------------------CCcCHHHHHHHHHHHHH
Q 039565          137 DLSFK----------------------------------------------------------GEFDIISVEKAVEIAMA  158 (188)
Q Consensus       137 ~~~~~----------------------------------------------------------~~~~~~~~~~~~~l~~~  158 (188)
                      .....                                                          ..........+.+++.+
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  290 (328)
T cd08226         211 QDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVEL  290 (328)
T ss_pred             CCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHH
Confidence            53211                                                          00112345678999999


Q ss_pred             ccCcCCCCCCCHHHHHH
Q 039565          159 SVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       159 cl~~~p~~Rps~~~i~~  175 (188)
                      ||+.+|++|||++++++
T Consensus       291 ~l~~dP~~Rpta~e~l~  307 (328)
T cd08226         291 CLQQDPEKRPSASSLLS  307 (328)
T ss_pred             HccCCcccCCCHHHHhh
Confidence            99999999999999986

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=1.3e-29  Score=193.75  Aligned_cols=162  Identities=20%  Similarity=0.243  Sum_probs=132.4

Q ss_pred             ccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEc
Q 039565            9 LTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTNILLN   74 (188)
Q Consensus         9 l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~   74 (188)
                      ..|||++++++.   ....++++||+++++|.+++....           |++.||.|||+   .+++|+|++|+||+++
T Consensus        59 ~~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~p~ni~i~  135 (277)
T cd06917          59 SQPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHK---VGVIHRDIKAANILVT  135 (277)
T ss_pred             CCCCCeeeEeeeeeeCCEEEEEEecCCCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHHEEEc
Confidence            359999999988   777899999999999999983222           89999999999   9999999999999999


Q ss_pred             cCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCC------
Q 039565           75 EKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFK------  141 (188)
Q Consensus        75 ~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~------  141 (188)
                      .++.++++|||.+.......  .......|+..|++||       ++.++|+||||+++|++++|..||+....      
T Consensus       136 ~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~  213 (277)
T cd06917         136 NTGNVKLCDFGVAALLNQNS--SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMML  213 (277)
T ss_pred             CCCCEEEccCCceeecCCCc--cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhc
Confidence            99999999999887543222  2223346777899998       36789999999999999999999854321      


Q ss_pred             ------CCcCH-HHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 ------GEFDI-ISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 ------~~~~~-~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                            ...+. ..+..+.+++..||+.+|++||++.+++.
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~  254 (277)
T cd06917         214 IPKSKPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLK  254 (277)
T ss_pred             cccCCCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence                  11111 24568899999999999999999999987

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.96  E-value=3.2e-30  Score=221.53  Aligned_cols=172  Identities=20%  Similarity=0.252  Sum_probs=132.4

Q ss_pred             cccccCCCeeeeccc-----CCccEEEEecCCCCChhhhcCC-------cc---------cHHHHHHHHhcCC----CCC
Q 039565            6 RNKLTGPLLVELIGK-----QKNNALELGFRGNPELVDQQGK-------EE---------VCCPGLEYLHQGL----KHP   60 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-----~~~~~lv~e~~~~~~L~~~~~~-------~~---------~i~~~l~~Lh~~~----~~~   60 (188)
                      +.+++||||++++++     ....++||||+++++|..++..       ..         |++.||.|||+..    ..+
T Consensus        66 L~~L~HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~  145 (1021)
T PTZ00266         66 MRELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGER  145 (1021)
T ss_pred             HHHcCCCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCC
Confidence            567899999999986     4568999999999999998821       11         9999999999721    134


Q ss_pred             cEEeCCCCCcEEEccC-----------------CceEEecccCcccccCCCCCcceeeecccccccCCC--------CCC
Q 039565           61 IIQRDMKSTNILLNEK-----------------VQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE--------LTE  115 (188)
Q Consensus        61 i~h~dl~~~nill~~~-----------------~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe--------~~~  115 (188)
                      |+|+||||+|||++..                 +.+||+|||++.....   ........|++.|+|||        ++.
T Consensus       146 IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~---~s~~~s~vGTp~YmAPEvL~ge~~~~s~  222 (1021)
T PTZ00266        146 VLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGI---ESMAHSCVGTPYYWSPELLLHETKSYDD  222 (1021)
T ss_pred             ceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccc---cccccccCCCccccCHHHHhccCCCCCc
Confidence            9999999999999642                 3489999999875431   11223456888999998        467


Q ss_pred             ccchHHHHHHHHHHHhCCccccccCC-----------CCcC-HHHHHHHHHHHHHccCcCCCCCCCHHHHHH--HHhhc
Q 039565          116 KSDVDSFEIVILEIITGILTVDLSFK-----------GEFD-IISVEKAVEIAMASVSSKVNRRPLMNQVVM--VREQG  180 (188)
Q Consensus       116 ~~di~s~G~~l~~~~~g~~p~~~~~~-----------~~~~-~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~--~l~~~  180 (188)
                      ++|||||||++|+|++|..||.....           ...+ ...+..+.+++..||+.+|.+||++.++++  .+...
T Consensus       223 KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i  301 (1021)
T PTZ00266        223 KSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPDLPIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNV  301 (1021)
T ss_pred             hhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence            89999999999999999999964221           0011 123567899999999999999999999984  45433

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.96  E-value=4.3e-31  Score=197.72  Aligned_cols=165  Identities=22%  Similarity=0.256  Sum_probs=143.0

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc--CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ--GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~--~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      |.+++.|+||+.||.   +..+|+|||||.-|+..+++  ++..           +.+.||+|||.   ..-+|||+|+.
T Consensus        82 MQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~---~~KIHRDIKAG  158 (502)
T KOG0574|consen   82 MQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHD---LKKIHRDIKAG  158 (502)
T ss_pred             HHHcCCchhhhhhhhhccCCceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHH---HHHHHhhcccc
Confidence            567889999999999   88999999999999999999  3333           77899999999   89999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC---
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF---  140 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~---  140 (188)
                      |||++.+|..|++|||++....  ......++..||+.|||||      +..++||||+|++..||..|++|+.+.-   
T Consensus       159 NILLNT~G~AKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMR  236 (502)
T KOG0574|consen  159 NILLNTDGIAKLADFGVAGQLT--DTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMR  236 (502)
T ss_pred             cEEEcccchhhhhhccccchhh--hhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccc
Confidence            9999999999999999987543  3334567789999999999      7899999999999999999999884311   


Q ss_pred             ---------CC--CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          141 ---------KG--EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       141 ---------~~--~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                               +.  ..+..++..+.+++..|+.++|++|-|+-++++
T Consensus       237 AIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~  282 (502)
T KOG0574|consen  237 AIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCE  282 (502)
T ss_pred             eeEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence                     11  245678899999999999999999999999887

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.96  E-value=9.4e-30  Score=195.31  Aligned_cols=161  Identities=18%  Similarity=0.209  Sum_probs=130.9

Q ss_pred             ccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCcEEE
Q 039565            9 LTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTNILL   73 (188)
Q Consensus         9 l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~nill   73 (188)
                      .+||||+.+.+.   .+..++||||+++++|..++ .+..           |++.||.|||+   .+++|+|+||+||++
T Consensus        54 ~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dikp~Nil~  130 (279)
T cd05633          54 GDCPFIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHN---RFVVYRDLKPANILL  130 (279)
T ss_pred             CCCCcEeEEEEEEecCCeEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCcCCCCCCHHHEEE
Confidence            479999999887   67889999999999999888 2221           89999999999   999999999999999


Q ss_pred             ccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCCC----
Q 039565           74 NEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFKG----  142 (188)
Q Consensus        74 ~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~----  142 (188)
                      +.++.++++|||++......    ......|+..|++||       ++.++|+||||+++|++++|..||......    
T Consensus       131 ~~~~~~~l~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~  206 (279)
T cd05633         131 DEHGHVRISDLGLACDFSKK----KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE  206 (279)
T ss_pred             CCCCCEEEccCCcceecccc----CccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHH
Confidence            99999999999988643211    122345778899998       356799999999999999999998643211    


Q ss_pred             ----------CcCHHHHHHHHHHHHHccCcCCCCCC-----CHHHHHHH
Q 039565          143 ----------EFDIISVEKAVEIAMASVSSKVNRRP-----LMNQVVMV  176 (188)
Q Consensus       143 ----------~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~i~~~  176 (188)
                                ..+...+..+.+++..|++.+|.+||     ++.++++.
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h  255 (279)
T cd05633         207 IDRMTLTVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH  255 (279)
T ss_pred             HHHHhhcCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence                      12233456888999999999999999     59888874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.96  E-value=3e-30  Score=207.76  Aligned_cols=164  Identities=21%  Similarity=0.325  Sum_probs=137.3

Q ss_pred             cccccCCCeeeeccc-----CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK-----QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      |+.|+||||++++..     ....-+|+|.+..|+|..|.++..            ||+.||.|||+ ....|||||||-
T Consensus        95 LKsL~H~NIirfy~SW~d~~n~~in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs-~~PPIIHRDLKC  173 (632)
T KOG0584|consen   95 LKSLKHPNIIRFYDSWVDTDNKTINFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHS-QDPPIIHRDLKC  173 (632)
T ss_pred             HccCCCCceeeeeeheecCCCceeeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhc-CCCCcccccccc
Confidence            567999999999998     455789999999999999994433            99999999997 235899999999


Q ss_pred             CcEEEccC-CceEEecccCcccccCCCCCcceeeecccccccCCC-----CCCccchHHHHHHHHHHHhCCccccc----
Q 039565           69 TNILLNEK-VQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-----LTEKSDVDSFEIVILEIITGILTVDL----  138 (188)
Q Consensus        69 ~nill~~~-~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-----~~~~~di~s~G~~l~~~~~g~~p~~~----  138 (188)
                      +||+++.+ |.+||+|+|++....  .+  ......|||.+||||     |...+||||||.++.||+|+..||..    
T Consensus       174 DNIFinG~~G~VKIGDLGLAtl~r--~s--~aksvIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~  249 (632)
T KOG0584|consen  174 DNIFVNGNLGEVKIGDLGLATLLR--KS--HAKSVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECTNP  249 (632)
T ss_pred             ceEEEcCCcCceeecchhHHHHhh--cc--ccceeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhCCH
Confidence            99999986 899999999998653  12  233478999999999     89999999999999999999999843    


Q ss_pred             ----------cCCCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          139 ----------SFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       139 ----------~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                ..+..+.......+.+++..|+.. ...|||+.++++
T Consensus       250 AQIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~  295 (632)
T KOG0584|consen  250 AQIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLK  295 (632)
T ss_pred             HHHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhh
Confidence                      122223334456889999999999 999999999987

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.96  E-value=3.4e-30  Score=204.25  Aligned_cols=166  Identities=18%  Similarity=0.232  Sum_probs=131.8

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      |..-++|+||+++-.   .+++||||||.+||++..++.+.+            +++-|++-+|.   .|+|||||||+|
T Consensus       195 L~~~ds~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~---~gyIHRDIKPdN  271 (550)
T KOG0605|consen  195 LAEVDSPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQ---LGYIHRDIKPDN  271 (550)
T ss_pred             hhhcCCCcEEEEEEEecCCCeeEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHH---cCcccccCChhh
Confidence            445679999999777   899999999999999999993322            88999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccC---------------------CCCCc-----c-------------------eeeeccc
Q 039565           71 ILLNEKVQAKLADFGQSRISPV---------------------EGGTH-----M-------------------STTIAGT  105 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~---------------------~~~~~-----~-------------------~~~~~~~  105 (188)
                      +|||..|++||+|||++.....                     .....     .                   .....||
T Consensus       272 lLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGT  351 (550)
T KOG0605|consen  272 LLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGT  351 (550)
T ss_pred             eeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCC
Confidence            9999999999999999853210                     00000     0                   0125699


Q ss_pred             ccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCCC---------------cCHHHHHHHHHHHHHccCcCC
Q 039565          106 AGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKGE---------------FDIISVEKAVEIAMASVSSKV  164 (188)
Q Consensus       106 ~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~~---------------~~~~~~~~~~~l~~~cl~~~p  164 (188)
                      |-|+|||      ++..+|.||+||++|||+.|.+||-...+.+               .......+..++|..|+. ||
T Consensus       352 PDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~  430 (550)
T KOG0605|consen  352 PDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DP  430 (550)
T ss_pred             ccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CH
Confidence            9999999      6899999999999999999999996544322               223445788899999998 99


Q ss_pred             CCCCC---HHHHHH
Q 039565          165 NRRPL---MNQVVM  175 (188)
Q Consensus       165 ~~Rps---~~~i~~  175 (188)
                      ++|.-   ++||-+
T Consensus       431 ~~RLG~~G~~EIK~  444 (550)
T KOG0605|consen  431 ENRLGSKGAEEIKK  444 (550)
T ss_pred             HHhcCcccHHHHhc
Confidence            99974   555543

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.96  E-value=7.2e-30  Score=190.48  Aligned_cols=163  Identities=20%  Similarity=0.240  Sum_probs=133.4

Q ss_pred             ccccCCCeeeeccc-------CCccEEEEecCCCCChhhhc-CCcc-------------cHHHHHHHHhcCCCCCcEEeC
Q 039565            7 NKLTGPLLVELIGK-------QKNNALELGFRGNPELVDQQ-GKEE-------------VCCPGLEYLHQGLKHPIIQRD   65 (188)
Q Consensus         7 ~~l~Hpniv~~~~~-------~~~~~lv~e~~~~~~L~~~~-~~~~-------------~i~~~l~~Lh~~~~~~i~h~d   65 (188)
                      ..-.|||||+++++       ...+.+|||.++||.|.+.+ ++..             |++.|+.|||+   .+|.|||
T Consensus       110 ~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~---~nIAHRD  186 (400)
T KOG0604|consen  110 MASGHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHS---MNIAHRD  186 (400)
T ss_pred             hhcCCCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHh---cchhhcc
Confidence            34469999999999       56778999999999999999 2222             99999999999   9999999


Q ss_pred             CCCCcEEEcc---CCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccc
Q 039565           66 MKSTNILLNE---KVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTV  136 (188)
Q Consensus        66 l~~~nill~~---~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~  136 (188)
                      +||+|+|.+.   +..+||+|||+++...   ......+.+.|++|.+||      ++..+|+||+||++|-++.|.+||
T Consensus       187 lKpENLLyt~t~~na~lKLtDfGFAK~t~---~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPF  263 (400)
T KOG0604|consen  187 LKPENLLYTTTSPNAPLKLTDFGFAKETQ---EPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF  263 (400)
T ss_pred             CChhheeeecCCCCcceEecccccccccC---CCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcc
Confidence            9999999965   4578999999998532   223345667889999998      789999999999999999999998


Q ss_pred             cccCC---------------CCcCH----HHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          137 DLSFK---------------GEFDI----ISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       137 ~~~~~---------------~~~~~----~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      -..-.               -+++.    ..++...+++...|..+|++|.|++++..
T Consensus       264 YS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~  321 (400)
T KOG0604|consen  264 YSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD  321 (400)
T ss_pred             cccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence            32111               11222    35678889999999999999999999865

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=7.5e-30  Score=200.38  Aligned_cols=167  Identities=20%  Similarity=0.224  Sum_probs=129.1

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-cc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-EE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +..++||||+++++.   .++.++||||+++|+|.+++.+ ..            |++.||+|||+   .+++||||||+
T Consensus        55 l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~  131 (331)
T cd05597          55 LVNGDRRWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQ---LGYVHRDIKPD  131 (331)
T ss_pred             HHhCCCCCCCceEEEEecCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeEECCCCHH
Confidence            345789999999888   7889999999999999999832 21            99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-----------CCCccchHHHHHHHHHHHhCCccccc
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-----------LTEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-----------~~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      ||+++.++.++|+|||++..... ..........|+..|++||           ++.++|+|||||++|+|++|..||..
T Consensus       132 Nill~~~~~~kl~Dfg~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~  210 (331)
T cd05597         132 NVLLDKNGHIRLADFGSCLRLLA-DGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYA  210 (331)
T ss_pred             HEEECCCCCEEEEECCceeecCC-CCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCC
Confidence            99999999999999998864321 1111222346888999998           24679999999999999999999854


Q ss_pred             cCCC-------------CcC---HHHHHHHHHHHHHccCcCCC--CCCCHHHHHHH
Q 039565          139 SFKG-------------EFD---IISVEKAVEIAMASVSSKVN--RRPLMNQVVMV  176 (188)
Q Consensus       139 ~~~~-------------~~~---~~~~~~~~~l~~~cl~~~p~--~Rps~~~i~~~  176 (188)
                      ....             ..+   ...+..+.+++.+|+...++  .|++++++++.
T Consensus       211 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h  266 (331)
T cd05597         211 ESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH  266 (331)
T ss_pred             CCHHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence            2110             011   12456788888887754333  37899888874

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.96  E-value=1.8e-30  Score=196.37  Aligned_cols=165  Identities=25%  Similarity=0.378  Sum_probs=134.3

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcC-Ccc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQG-KEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~-~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++   ....+++|||+++++|.+++. ...           |++.||.+||+   .+++|+||||+|
T Consensus        52 ~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~---~~i~H~dikp~N  128 (260)
T PF00069_consen   52 LRRLRHPNIVQILDVFQDDNYLYIVMEYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHS---KGIVHRDIKPEN  128 (260)
T ss_dssp             HHHHTBTTBCHEEEEEEESSEEEEEEEEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHH---TTEEESSBSGGG
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---cccccccccccc
Confidence            456789999999999   788899999999999999884 222           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCCCC
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFKGE  143 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~~  143 (188)
                      |+++.++.++++|||.+...  ...........++..|.+||       .+.++|+||+|+++++|++|..||.......
T Consensus       129 Il~~~~~~~~l~Dfg~~~~~--~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~  206 (260)
T PF00069_consen  129 ILLDENGEVKLIDFGSSVKL--SENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDD  206 (260)
T ss_dssp             EEESTTSEEEESSGTTTEES--TSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHH
T ss_pred             cccccccccccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccchh
Confidence            99999999999999998643  11222333456777888887       5788999999999999999999887641100


Q ss_pred             ------------cC------HHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          144 ------------FD------IISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       144 ------------~~------~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                  ..      ......+.+++..||+.+|++|||++++++
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~  256 (260)
T PF00069_consen  207 QLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLK  256 (260)
T ss_dssp             HHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred             hhhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                        00      001368999999999999999999999975

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.96  E-value=2.1e-29  Score=191.58  Aligned_cols=167  Identities=20%  Similarity=0.320  Sum_probs=134.5

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +++++||||+++++.   .+..++++||+.+++|.+++ +...           |++.||.|||+   .+++|+|++|.|
T Consensus        57 l~~l~h~~iv~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~---~~i~H~~i~~~n  133 (268)
T cd06630          57 MARLNHPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHE---NQIIHRDVKGAN  133 (268)
T ss_pred             HHHcCCCceehhhceeccCCeEEEEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHH
Confidence            456899999999999   77889999999999999998 2221           99999999999   999999999999


Q ss_pred             EEEccCC-ceEEecccCcccccCCCC--CcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC
Q 039565           71 ILLNEKV-QAKLADFGQSRISPVEGG--THMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK  141 (188)
Q Consensus        71 ill~~~~-~~kl~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~  141 (188)
                      |+++.++ .++++|||.+........  ........++..|++||      ++.++|+||+|++++++++|..||.....
T Consensus       134 il~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~  213 (268)
T cd06630         134 LLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKH  213 (268)
T ss_pred             EEEcCCCCEEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC
Confidence            9998776 589999998875432211  11122345677889988      47789999999999999999999853221


Q ss_pred             ----------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 ----------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 ----------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                      .+.+......+.+++.+|++.+|.+||++.++++
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~  263 (268)
T cd06630         214 SNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK  263 (268)
T ss_pred             cchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence                            2233345678899999999999999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=9.7e-30  Score=192.82  Aligned_cols=161  Identities=24%  Similarity=0.271  Sum_probs=130.7

Q ss_pred             cccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCcEE
Q 039565            8 KLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTNIL   72 (188)
Q Consensus         8 ~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~nil   72 (188)
                      ..+|||++++++.   .+..++++||+++++|.+++....            |++.||.|||+   .+++|+|++|.||+
T Consensus        53 ~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~i~H~dl~p~nil  129 (260)
T cd05611          53 QGESPYVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQ---RGIIHRDIKPENLL  129 (260)
T ss_pred             cCCCCCeeeeeeeEEcCCeEEEEEeccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeE
Confidence            4589999999988   778999999999999999983221            99999999999   99999999999999


Q ss_pred             EccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCC----
Q 039565           73 LNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKG----  142 (188)
Q Consensus        73 l~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~----  142 (188)
                      ++.++.++++|||++.....      .....++..|++||      ++.++|+||||+++|++++|..||......    
T Consensus       130 ~~~~~~~~l~dfg~~~~~~~------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~  203 (260)
T cd05611         130 IDQTGHLKLTDFGLSRNGLE------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFD  203 (260)
T ss_pred             ECCCCcEEEeecccceeccc------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence            99999999999998764321      22345667788888      477899999999999999999998543211    


Q ss_pred             -----------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHH
Q 039565          143 -----------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVR  177 (188)
Q Consensus       143 -----------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l  177 (188)
                                 ......+..+.+++.+||+.+|++||++.++.+.|
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l  249 (260)
T cd05611         204 NILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIK  249 (260)
T ss_pred             HHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence                       11123467899999999999999999776554443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.96  E-value=1e-29  Score=194.98  Aligned_cols=166  Identities=18%  Similarity=0.243  Sum_probs=132.0

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +++++||||++++++   +...++|+||+ +++|.+++ ....            |++.||.|||+   .+++|+|++|+
T Consensus        53 l~~~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~  128 (286)
T cd07832          53 LQACQHPYVVKLLDVFPHGSGFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHA---NGIMHRDLKPA  128 (286)
T ss_pred             HHhCCCCCCcceeeEEecCCeeEEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCHH
Confidence            456789999999998   77889999999 89999988 2211            89999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCCC
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFKG  142 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~  142 (188)
                      ||+++.++.++++|||.+........ .......++..|++||       ++.++|+||+|++++++++|..+|......
T Consensus       129 ni~~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~  207 (286)
T cd07832         129 NLLISADGVLKIADFGLARLFSEEEP-RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI  207 (286)
T ss_pred             HEEEcCCCcEEEeeeeecccccCCCC-CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH
Confidence            99999999999999998875432211 1122345777899998       367899999999999999998776432100


Q ss_pred             -----------------------------------------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          143 -----------------------------------------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       143 -----------------------------------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                                                               +........+.+++..|++.+|++|||++++++.
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h  282 (286)
T cd07832         208 EQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH  282 (286)
T ss_pred             HHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence                                                     0001234788899999999999999999999863

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.96  E-value=1.6e-29  Score=195.31  Aligned_cols=165  Identities=22%  Similarity=0.249  Sum_probs=131.0

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc-c-----------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE-E-----------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~-~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||++++++   .+..++|+||+ +++|.+++ ... .           |++.||.|||+   .+++|+|++|+
T Consensus        56 l~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~  131 (298)
T cd07841          56 LQELKHPNIIGLLDVFGHKSNINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHS---NWILHRDLKPN  131 (298)
T ss_pred             HhhcCCCCChhhhheeecCCEEEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCChh
Confidence            567899999999999   67889999999 78999999 333 1           99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCCC
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFKG  142 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~  142 (188)
                      ||+++.++.++++|||++.......  .......++..|++||       ++.++|+||||+++|++++|..+|......
T Consensus       132 nill~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~  209 (298)
T cd07841         132 NLLIASDGVLKLADFGLARSFGSPN--RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDI  209 (298)
T ss_pred             hEEEcCCCCEEEccceeeeeccCCC--ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccH
Confidence            9999999999999999987543211  1122234556788887       367899999999999999997666422110


Q ss_pred             C---------------------------------------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          143 E---------------------------------------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       143 ~---------------------------------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                      +                                       .....+..+.+++..||+.+|++|||+.++++.
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~  282 (298)
T cd07841         210 DQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH  282 (298)
T ss_pred             HHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence            0                                       001224678899999999999999999999984

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.96  E-value=8.1e-30  Score=200.21  Aligned_cols=167  Identities=21%  Similarity=0.240  Sum_probs=131.0

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-cc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-EE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +..++||||+++++.   ....++||||+++|+|.+++.+ ..            |++.||.|||+   .+++||||||+
T Consensus        55 l~~~~~~~i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~---~~iiHrDlkp~  131 (332)
T cd05623          55 LVNGDNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQ---LHYVHRDIKPD  131 (332)
T ss_pred             HhhCCCCCEeeEEEEEecCCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHH
Confidence            456789999999888   7889999999999999999932 11            89999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-----------CCCccchHHHHHHHHHHHhCCccccc
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-----------LTEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-----------~~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      ||+++.++.++|+|||++.... ...........|+..|++||           ++.++|+|||||++|+|++|..||..
T Consensus       132 Nili~~~~~~kL~DfG~a~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~  210 (332)
T cd05623         132 NILMDMNGHIRLADFGSCLKLM-EDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYA  210 (332)
T ss_pred             HEEECCCCCEEEeecchheecc-cCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCC
Confidence            9999999999999999886432 11112223356889999998           35689999999999999999999854


Q ss_pred             cCC-------------CCcC---HHHHHHHHHHHHHccCcCCCC--CCCHHHHHHH
Q 039565          139 SFK-------------GEFD---IISVEKAVEIAMASVSSKVNR--RPLMNQVVMV  176 (188)
Q Consensus       139 ~~~-------------~~~~---~~~~~~~~~l~~~cl~~~p~~--Rps~~~i~~~  176 (188)
                      ...             ..++   ...+..+.+++..|+..++.+  |++++++++.
T Consensus       211 ~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h  266 (332)
T cd05623         211 ESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH  266 (332)
T ss_pred             CCHHHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence            221             0111   134667888898888655444  6889988764

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.96  E-value=2e-29  Score=193.34  Aligned_cols=161  Identities=19%  Similarity=0.226  Sum_probs=132.3

Q ss_pred             cccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCcEE
Q 039565            8 KLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTNIL   72 (188)
Q Consensus         8 ~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~nil   72 (188)
                      ..+||||+++.+.   .+..++++||+.+++|..++.+..            |++.|+.|||+   .+++|+|++|+||+
T Consensus        53 ~~~~~~i~~~~~~~~~~~~~~~v~e~~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~nil  129 (278)
T cd05606          53 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHN---RFVVYRDLKPANIL  129 (278)
T ss_pred             hCCCCcEeeeeeeeecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCCCCHHHEE
Confidence            3579999999887   778899999999999999882221            89999999999   99999999999999


Q ss_pred             EccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCC----
Q 039565           73 LNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFK----  141 (188)
Q Consensus        73 l~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~----  141 (188)
                      ++.++.++++|||.+......    ......|+..|++||       ++.++|+||+|+++|++++|..||+....    
T Consensus       130 i~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~  205 (278)
T cd05606         130 LDEHGHVRISDLGLACDFSKK----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH  205 (278)
T ss_pred             ECCCCCEEEccCcCccccCcc----CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchH
Confidence            999999999999988643211    122346788899998       46779999999999999999999865421    


Q ss_pred             ----------CCcCHHHHHHHHHHHHHccCcCCCCCC-----CHHHHHH
Q 039565          142 ----------GEFDIISVEKAVEIAMASVSSKVNRRP-----LMNQVVM  175 (188)
Q Consensus       142 ----------~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~i~~  175 (188)
                                .+.+...+..+.+++..|+..+|.+||     ++.++++
T Consensus       206 ~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~  254 (278)
T cd05606         206 EIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  254 (278)
T ss_pred             HHHHHhhccCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence                      112223467899999999999999999     9999986

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.96  E-value=1.9e-29  Score=194.21  Aligned_cols=164  Identities=21%  Similarity=0.244  Sum_probs=128.0

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc-c-----------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE-E-----------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~-~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +++++||||++++++   .+..++|+||+++ +|.+++ +.. .           |++.||.|||+   .+++|+|++|+
T Consensus        57 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~dl~p~  132 (291)
T cd07844          57 LKDLKHANIVTLHDIIHTKKTLTLVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQ---RRVLHRDLKPQ  132 (291)
T ss_pred             HhhCCCcceeeEEEEEecCCeEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCHH
Confidence            567899999999998   7789999999984 899888 221 1           99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCCC
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFKG  142 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~  142 (188)
                      ||+++.++.++++|||.++.......  ......++..|++||       ++.++|+||+|+++|+|++|..||......
T Consensus       133 nil~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~  210 (291)
T cd07844         133 NLLISERGELKLADFGLARAKSVPSK--TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDV  210 (291)
T ss_pred             HEEEcCCCCEEECccccccccCCCCc--cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccH
Confidence            99999999999999998764321111  111223566788888       356799999999999999999888533200


Q ss_pred             -----------------C-----------------c-CH-------HH--HHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          143 -----------------E-----------------F-DI-------IS--VEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       143 -----------------~-----------------~-~~-------~~--~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                       .                 . +.       ..  ...+.+++..|++.+|++|||++++++
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~  287 (291)
T cd07844         211 EDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK  287 (291)
T ss_pred             HHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence                             0                 0 00       01  156779999999999999999999875

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.96  E-value=2.5e-29  Score=190.48  Aligned_cols=167  Identities=23%  Similarity=0.334  Sum_probs=137.2

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-cc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-EE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++|||++++++.   ....++++||+++++|.+++.+ ..           |++.|+.|||+.  .+++|+|++|+|
T Consensus        53 l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~--~~~~H~~l~~~n  130 (264)
T cd06623          53 LRSCESPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTK--RHIIHRDIKPSN  130 (264)
T ss_pred             HHhcCCCCeeeEEEEEccCCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhcc--CCCccCCCCHHH
Confidence            567889999999998   7889999999999999999932 22           999999999973  799999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC----
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF----  140 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~----  140 (188)
                      |+++.++.++++|||.+.......  .......++..|++||      .+.++|+||||+++|++++|..||....    
T Consensus       131 i~~~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~  208 (264)
T cd06623         131 LLINSKGEVKIADFGISKVLENTL--DQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSF  208 (264)
T ss_pred             EEECCCCCEEEccCccceecccCC--CcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCH
Confidence            999999999999999887543111  1222345677888988      4778999999999999999999986552    


Q ss_pred             -----------CCCcCHH-HHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          141 -----------KGEFDII-SVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       141 -----------~~~~~~~-~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                                 ....+.. .+..+.+++..|++.+|+.||++.++++.
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~  256 (264)
T cd06623         209 FELMQAICDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH  256 (264)
T ss_pred             HHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence                       1122333 56789999999999999999999999873

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.96  E-value=1.1e-29  Score=194.85  Aligned_cols=164  Identities=21%  Similarity=0.223  Sum_probs=128.4

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC---cc-----------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK---EE-----------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~---~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +++++||||++++++   ....++++||+. ++|..++..   ..           |++.||+|||+   .+++|+|++|
T Consensus        53 l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~---~~i~H~~l~p  128 (284)
T cd07860          53 LKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKP  128 (284)
T ss_pred             HHhcCCCCCcchhhhcccCCcEEEEeeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCH
Confidence            567899999999999   788999999996 588888721   11           89999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCC
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFK  141 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~  141 (188)
                      +||+++.++.++++|||++........  ......++..|++||       .+.++|+||||+++|++++|..||.....
T Consensus       129 ~nill~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~  206 (284)
T cd07860         129 QNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE  206 (284)
T ss_pred             HHEEECCCCCEEEeeccchhhcccCcc--ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH
Confidence            999999999999999998865431111  112234566788998       36679999999999999999988743211


Q ss_pred             CC----------------------------------------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 GE----------------------------------------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 ~~----------------------------------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      .+                                        ........+.+++.+|++.+|.+|||++++++
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  280 (284)
T cd07860         207 IDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA  280 (284)
T ss_pred             HHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence            00                                        00012356778999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.96  E-value=2.7e-29  Score=189.21  Aligned_cols=168  Identities=23%  Similarity=0.278  Sum_probs=137.7

Q ss_pred             CcccccCCCeeeeccc---C--CccEEEEecCCCCChhhhcCCc-c-----------cHHHHHHHHhcCCCCCcEEeCCC
Q 039565            5 NRNKLTGPLLVELIGK---Q--KNNALELGFRGNPELVDQQGKE-E-----------VCCPGLEYLHQGLKHPIIQRDMK   67 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~---~--~~~~lv~e~~~~~~L~~~~~~~-~-----------~i~~~l~~Lh~~~~~~i~h~dl~   67 (188)
                      .+++++||||+++++.   .  ...++++||+++++|.+++.+. .           |++.|+.|||+   .+++|+|++
T Consensus        52 ~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~~~h~dl~  128 (260)
T cd06606          52 ILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHS---NGIVHRDIK  128 (260)
T ss_pred             HHHHcCCCCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCC
Confidence            3567889999999988   4  6789999999999999998222 2           99999999999   999999999


Q ss_pred             CCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC-
Q 039565           68 STNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF-  140 (188)
Q Consensus        68 ~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~-  140 (188)
                      |+||+++.++.++++|||.+................++..|.+||      .+.++|+||||++++++++|..||+... 
T Consensus       129 p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~  208 (260)
T cd06606         129 GANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN  208 (260)
T ss_pred             HHHEEEcCCCCEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc
Confidence            999999999999999999887543222111123456777888998      5778999999999999999999986542 


Q ss_pred             -------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          141 -------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       141 -------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                   ....+...+..+.+++.+|++.+|.+||++.++++
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~  256 (260)
T cd06606         209 PMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ  256 (260)
T ss_pred             hHHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence                         12234455778999999999999999999999985

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.96  E-value=1.9e-29  Score=194.46  Aligned_cols=164  Identities=18%  Similarity=0.191  Sum_probs=130.0

Q ss_pred             cccccCCCeeeeccc---C--CccEEEEecCCCCChhhhc-CCc---c---------cHHHHHHHHhcCCCCCcEEeCCC
Q 039565            6 RNKLTGPLLVELIGK---Q--KNNALELGFRGNPELVDQQ-GKE---E---------VCCPGLEYLHQGLKHPIIQRDMK   67 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~--~~~~lv~e~~~~~~L~~~~-~~~---~---------~i~~~l~~Lh~~~~~~i~h~dl~   67 (188)
                      +.+++||||+++.++   .  ...++++||++ ++|.+++ ...   .         |++.||.|||+   .+++|+|++
T Consensus        58 l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~  133 (293)
T cd07843          58 LLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVE-HDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHD---NWILHRDLK  133 (293)
T ss_pred             HHhcCCCCEEEEEEEEEecCCCcEEEEehhcC-cCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCC
Confidence            567899999999987   4  78999999998 4898887 221   1         89999999999   999999999


Q ss_pred             CCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           68 STNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        68 ~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      |+||+++.++.++++|||++.......  .......++..|++||       .+.++|+||||+++|++++|..||....
T Consensus       134 p~nili~~~~~~~l~d~g~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~  211 (293)
T cd07843         134 TSNLLLNNRGILKICDFGLAREYGSPL--KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKS  211 (293)
T ss_pred             HHHEEECCCCcEEEeecCceeeccCCc--cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            999999999999999999887543221  1122234567789998       3567999999999999999998775321


Q ss_pred             C------------------------------------------CCcCHH-HHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          141 K------------------------------------------GEFDII-SVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       141 ~------------------------------------------~~~~~~-~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      .                                          ..++.. ....+.+++.+||+.+|++|||+.++++
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~  289 (293)
T cd07843         212 EIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK  289 (293)
T ss_pred             hHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence            0                                          001111 3567889999999999999999999985

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.96  E-value=3.2e-29  Score=206.54  Aligned_cols=165  Identities=18%  Similarity=0.176  Sum_probs=126.4

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc-c---------------cHHHHHHHHhcCCCCCcEEeC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE-E---------------VCCPGLEYLHQGLKHPIIQRD   65 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~-~---------------~i~~~l~~Lh~~~~~~i~h~d   65 (188)
                      |.+++||||++++++   .+..+++++++. ++|..++ ... .               |++.||.|||+   .+|+|||
T Consensus       217 l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~---~gIiHrD  292 (501)
T PHA03210        217 LGRLNHENILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHD---KKLIHRD  292 (501)
T ss_pred             HHhCCCCCcCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHh---CCeecCC
Confidence            567899999999998   778899999987 4666665 211 0               89999999999   9999999


Q ss_pred             CCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCc-cccc
Q 039565           66 MKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGIL-TVDL  138 (188)
Q Consensus        66 l~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~-p~~~  138 (188)
                      |||+||+++.++.+||+|||++..+... .........|+..|++||      ++.++|||||||++|+|++|.. |+..
T Consensus       293 LKP~NILl~~~~~vkL~DFGla~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~  371 (501)
T PHA03210        293 IKLENIFLNCDGKIVLGDFGTAMPFEKE-REAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGD  371 (501)
T ss_pred             CCHHHEEECCCCCEEEEeCCCceecCcc-cccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccC
Confidence            9999999999999999999998754321 111223467889999999      5788999999999999999874 3321


Q ss_pred             cCC-----------------CCcCH----------------------------HHHHHHHHHHHHccCcCCCCCCCHHHH
Q 039565          139 SFK-----------------GEFDI----------------------------ISVEKAVEIAMASVSSKVNRRPLMNQV  173 (188)
Q Consensus       139 ~~~-----------------~~~~~----------------------------~~~~~~~~l~~~cl~~~p~~Rps~~~i  173 (188)
                      ...                 .+++.                            .....+.+++.+|++.||.+|||+.++
T Consensus       372 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~el  451 (501)
T PHA03210        372 GGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAEL  451 (501)
T ss_pred             CCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHH
Confidence            110                 00000                            011235567889999999999999999


Q ss_pred             HH
Q 039565          174 VM  175 (188)
Q Consensus       174 ~~  175 (188)
                      ++
T Consensus       452 L~  453 (501)
T PHA03210        452 LA  453 (501)
T ss_pred             hh
Confidence            87

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.96  E-value=9.1e-30  Score=192.78  Aligned_cols=163  Identities=22%  Similarity=0.283  Sum_probs=135.2

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc-c-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE-E-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~-~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +++++||||+++++.   ....++++||+.+++|..++.+. .           |++.||.|||+   .+++|+|++|+|
T Consensus        54 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~n  130 (258)
T cd05578          54 LQELNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHS---KGIIHRDIKPDN  130 (258)
T ss_pred             HHhCCCCChHHHHHhhcCCCeEEEEEeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHH
Confidence            567899999999888   78899999999999999999322 2           89999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC---
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK---  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~---  141 (188)
                      |+++.++.++++|||.+.......   ......++..|++||      .+.++|+||||+++|++++|..||+....   
T Consensus       131 il~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~  207 (258)
T cd05578         131 ILLDEQGHVHITDFNIATKVTPDT---LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIR  207 (258)
T ss_pred             eEEcCCCCEEEeecccccccCCCc---cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHH
Confidence            999999999999999877543111   223345677788998      47899999999999999999999875442   


Q ss_pred             -----------CCcCHHHHHHHHHHHHHccCcCCCCCCCH--HHHH
Q 039565          142 -----------GEFDIISVEKAVEIAMASVSSKVNRRPLM--NQVV  174 (188)
Q Consensus       142 -----------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~--~~i~  174 (188)
                                 ...+...+..+.+++..||+.+|.+||++  ++++
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~  253 (258)
T cd05578         208 DQIRAKQETADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK  253 (258)
T ss_pred             HHHHHHhccccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence                       22334456789999999999999999999  6554

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.96  E-value=3.8e-30  Score=204.15  Aligned_cols=166  Identities=20%  Similarity=0.282  Sum_probs=129.5

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||+++++.   ....++||||+++|+|.+++ ....           |++.||.|||+   .+++||||||+|
T Consensus        55 l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~---~givHrDLkp~N  131 (360)
T cd05627          55 LVEADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQ---LGFIHRDIKPDN  131 (360)
T ss_pred             HHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHH
Confidence            457899999999988   77899999999999999998 3222           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCC---------------------------------CcceeeecccccccCCC-----
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGG---------------------------------THMSTTIAGTAGFLNTE-----  112 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~---------------------------------~~~~~~~~~~~~~~~pe-----  112 (188)
                      |+++.++.++|+|||++........                                 ........|+..|+|||     
T Consensus       132 Ili~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~  211 (360)
T cd05627         132 LLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQT  211 (360)
T ss_pred             EEECCCCCEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCC
Confidence            9999999999999998764321100                                 00012346889999998     


Q ss_pred             -CCCccchHHHHHHHHHHHhCCccccccCCCC-------------cCH--HHHHHHHHHHHHccCcCCCCCCC---HHHH
Q 039565          113 -LTEKSDVDSFEIVILEIITGILTVDLSFKGE-------------FDI--ISVEKAVEIAMASVSSKVNRRPL---MNQV  173 (188)
Q Consensus       113 -~~~~~di~s~G~~l~~~~~g~~p~~~~~~~~-------------~~~--~~~~~~~~l~~~cl~~~p~~Rps---~~~i  173 (188)
                       ++.++|+|||||++|+|++|..||......+             ++.  ..+..+.+++..++. +|.+|++   ++++
T Consensus       212 ~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei  290 (360)
T cd05627         212 GYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEI  290 (360)
T ss_pred             CCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHH
Confidence             5789999999999999999999985432211             111  135677888888664 9999985   6666


Q ss_pred             HH
Q 039565          174 VM  175 (188)
Q Consensus       174 ~~  175 (188)
                      ++
T Consensus       291 ~~  292 (360)
T cd05627         291 KS  292 (360)
T ss_pred             hc
Confidence            65

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.96  E-value=1.4e-29  Score=192.21  Aligned_cols=164  Identities=24%  Similarity=0.337  Sum_probs=133.4

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc-c------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE-E------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~-~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +++++||||+++++.   ....++++||+++++|.+++... .            |++.|++|||+.  .+++|+|++|.
T Consensus        53 l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~--~~i~H~dl~~~  130 (265)
T cd06605          53 LHKCNSPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEK--HKIIHRDVKPS  130 (265)
T ss_pred             HHHCCCCchhhhheeeecCCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCC--CCeecCCCCHH
Confidence            467889999999988   78899999999999999999322 1            899999999973  69999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC--
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK--  141 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~--  141 (188)
                      ||+++.++.++++|||.+.......    .....++..|++||      ++.++|+||||+++|++++|..||.....  
T Consensus       131 ni~~~~~~~~~l~d~g~~~~~~~~~----~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~  206 (265)
T cd06605         131 NILVNSRGQIKLCDFGVSGQLVNSL----AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPP  206 (265)
T ss_pred             HEEECCCCCEEEeecccchhhHHHH----hhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccc
Confidence            9999999999999999876432111    11256777889998      57889999999999999999998864310  


Q ss_pred             ---------------CCcCHH-HHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 ---------------GEFDII-SVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 ---------------~~~~~~-~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                     ...+.. .+..+.+++..||..+|++|||+.+++.
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  256 (265)
T cd06605         207 DGIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLE  256 (265)
T ss_pred             ccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence                           011112 4667899999999999999999999986

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.96  E-value=4.9e-29  Score=187.07  Aligned_cols=164  Identities=25%  Similarity=0.309  Sum_probs=134.9

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc--c-----------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE--E-----------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~--~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++|||++++.+.   ....++++||+++++|.+++...  .           |++.|+.|||+   .+++|+|++|.
T Consensus        51 l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~---~~i~h~dl~p~  127 (253)
T cd05122          51 LKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHS---NGIIHRDIKAA  127 (253)
T ss_pred             HHhCCCCCEeEEEEEEecCCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhc---CCEecCCCCHH
Confidence            467889999999998   77889999999999999998222  1           99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC---
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF---  140 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~---  140 (188)
                      ||+++.++.++|+|||.+........   .....++..|++||      .+.++|+||||+++|++++|..||+...   
T Consensus       128 ni~i~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~  204 (253)
T cd05122         128 NILLTSDGEVKLIDFGLSAQLSDTKA---RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMK  204 (253)
T ss_pred             HEEEccCCeEEEeecccccccccccc---ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHH
Confidence            99999999999999998875432111   33456777889998      4778999999999999999999886541   


Q ss_pred             ---------CCCcCHH--HHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          141 ---------KGEFDII--SVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       141 ---------~~~~~~~--~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                               .......  .+..+.+++.+||+.+|++|||+.++++
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~  250 (253)
T cd05122         205 ALFKIATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK  250 (253)
T ss_pred             HHHHHHhcCCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence                     1111111  2578999999999999999999999875

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.96  E-value=2.2e-29  Score=197.99  Aligned_cols=167  Identities=22%  Similarity=0.250  Sum_probs=131.0

Q ss_pred             cccc-cCCCeeeeccc-----CCccEEEEecCCCCChhhhcCCcc-----------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKL-TGPLLVELIGK-----QKNNALELGFRGNPELVDQQGKEE-----------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l-~Hpniv~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +.++ +||||++++++     ....++|+||++ ++|..++....           |++.||.|||+   .+++|+|++|
T Consensus        60 l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~i~H~dl~p  135 (337)
T cd07852          60 LQELGDHPNIVKLLNVIKAENDKDIYLVFEYME-TDLHAVIRANILEDVHKRYIMYQLLKALKYIHS---GNVIHRDLKP  135 (337)
T ss_pred             HHHhcCCCCccceeeeeccCCCceEEEEecccc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCH
Confidence            3567 99999999997     335799999998 59988882212           89999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCC---cceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccc
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGT---HMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~---~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      .||+++.++.++++|||++.........   .......++..|++||       .+.++|+||||+++|++++|+.||..
T Consensus       136 ~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~  215 (337)
T cd07852         136 SNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPG  215 (337)
T ss_pred             HHEEEcCCCcEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCC
Confidence            9999999999999999988754322211   1223456788899999       35689999999999999999988853


Q ss_pred             cCCCC------------------------------------------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          139 SFKGE------------------------------------------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       139 ~~~~~------------------------------------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                      ....+                                          .....+..+.+++..||+.+|.+|||+.++++.
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~  295 (337)
T cd07852         216 TSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH  295 (337)
T ss_pred             CChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence            21100                                          000124567899999999999999999999974

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.96  E-value=8.3e-30  Score=192.95  Aligned_cols=170  Identities=23%  Similarity=0.331  Sum_probs=134.1

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc-c-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE-E-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~-~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||+++++.   ....++++||+++++|.+++.+. .           |++.||+|||+   .+++|+|++|.|
T Consensus        47 l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~di~~~n  123 (265)
T cd05579          47 LSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHS---NGIIHRDLKPDN  123 (265)
T ss_pred             HHhCCCcchhHHHHheecCcEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---cCeecCCCCHHH
Confidence            456789999999888   77889999999999999988221 2           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCC------CcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccc
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGG------THMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~------~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      |+++.++.++++|||++........      ........++..|++||      .+.++|+||||+++|++++|..||+.
T Consensus       124 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~  203 (265)
T cd05579         124 ILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHG  203 (265)
T ss_pred             eEEcCCCCEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence            9999999999999998765322211      11222345667788888      46789999999999999999999864


Q ss_pred             cCCC-----------CcCHHH--HHHHHHHHHHccCcCCCCCCCHHHHHHHHh
Q 039565          139 SFKG-----------EFDIIS--VEKAVEIAMASVSSKVNRRPLMNQVVMVRE  178 (188)
Q Consensus       139 ~~~~-----------~~~~~~--~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~  178 (188)
                      ....           ..+...  +..+.+++..||+.+|.+|||+..+.+.|+
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~  256 (265)
T cd05579         204 ETPEEIFQNILNGKIEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN  256 (265)
T ss_pred             CCHHHHHHHHhcCCcCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence            3211           112222  678899999999999999999955555554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.96  E-value=4.9e-29  Score=191.62  Aligned_cols=165  Identities=22%  Similarity=0.261  Sum_probs=134.4

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc-c-----------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE-E-----------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~-~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++|||++++++.   ....++++||+++++|.+++ ... .           |++.||.|||+   .+++|+|++|+
T Consensus        69 l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~---~gi~H~dl~p~  145 (286)
T cd06614          69 MKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHS---QNVIHRDIKSD  145 (286)
T ss_pred             HHHCCCCCeeEEEEEEEECCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCChh
Confidence            567899999999988   88899999999999999999 322 2           99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCC-
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKG-  142 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~-  142 (188)
                      ||+++.++.++++|||.+.......  .......++..|++||      ++.++|+||||+++|++++|..||...... 
T Consensus       146 ni~i~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~  223 (286)
T cd06614         146 NILLSKDGSVKLADFGFAAQLTKEK--SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLR  223 (286)
T ss_pred             hEEEcCCCCEEECccchhhhhccch--hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            9999999999999999876432111  1223345667788888      478899999999999999999887542210 


Q ss_pred             -------------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          143 -------------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       143 -------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                   ......+..+.+++.+|++.+|.+|||++++++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~  269 (286)
T cd06614         224 ALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ  269 (286)
T ss_pred             HHHHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence                         111124567999999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.96  E-value=3.2e-29  Score=210.21  Aligned_cols=167  Identities=24%  Similarity=0.315  Sum_probs=137.4

Q ss_pred             cCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc------------------c---------cHHHHHHHHhcCCC
Q 039565           10 TGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE------------------E---------VCCPGLEYLHQGLK   58 (188)
Q Consensus        10 ~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~------------------~---------~i~~~l~~Lh~~~~   58 (188)
                      +||||+.++|.   ....++|.||+..|+|..++ ++.                  .         |+|.|++||++   
T Consensus       360 ~H~niv~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~---  436 (609)
T KOG0200|consen  360 KHPNIVNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLAS---  436 (609)
T ss_pred             CCcchhhheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhh---
Confidence            59999999998   68899999999999999999 333                  1         99999999999   


Q ss_pred             CCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeec--ccccccCCC------CCCccchHHHHHHHHHHH
Q 039565           59 HPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA--GTAGFLNTE------LTEKSDVDSFEIVILEII  130 (188)
Q Consensus        59 ~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~--~~~~~~~pe------~~~~~di~s~G~~l~~~~  130 (188)
                      .+++|||+..+||++..+..+|++|||+++........ ......  -+..|||||      ++.++|+||||+++||++
T Consensus       437 ~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y-~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~Eif  515 (609)
T KOG0200|consen  437 VPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYY-RTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIF  515 (609)
T ss_pred             CCccchhhhhhhEEecCCCEEEEccccceeccCCCCce-EecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHh
Confidence            99999999999999999999999999999853211111 111111  244699998      799999999999999999


Q ss_pred             h-CCccccc-------------cCCCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhc
Q 039565          131 T-GILTVDL-------------SFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQG  180 (188)
Q Consensus       131 ~-g~~p~~~-------------~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~  180 (188)
                      | |..|+..             ....+.+..+..++.+++..||+.+|+.||++.++++.|+..
T Consensus       516 sLG~~PYp~~~~~~~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~  579 (609)
T KOG0200|consen  516 TLGGTPYPGIPPTEELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH  579 (609)
T ss_pred             hCCCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence            7 5567653             122345667788999999999999999999999999999874

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.96  E-value=2.2e-29  Score=203.26  Aligned_cols=160  Identities=23%  Similarity=0.252  Sum_probs=132.7

Q ss_pred             cccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc----------cHHHHHHHHhcCCCCCcEEeCCCCCcEEE
Q 039565            8 KLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE----------VCCPGLEYLHQGLKHPIIQRDMKSTNILL   73 (188)
Q Consensus         8 ~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~----------~i~~~l~~Lh~~~~~~i~h~dl~~~nill   73 (188)
                      .-+||||+++.+.   ..+.|+|||.+.++-+.+.+ .+..          +++.|+.|||+   .+++|||+||.|||+
T Consensus       372 ~~~h~niv~~~~v~~~~~~~~~v~e~l~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~---~gvvhRDLkp~NIL~  448 (612)
T KOG0603|consen  372 VRDHPNIVKSHDVYEDGKEIYLVMELLDGGELLRRIRSKPEFCSEASQWAAELVSAVDYLHE---QGVVHRDLKPGNILL  448 (612)
T ss_pred             hcCCCcceeecceecCCceeeeeehhccccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHh---cCeeecCCChhheee
Confidence            3469999999999   88999999999988777777 2221          88999999999   999999999999999


Q ss_pred             -ccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCC----
Q 039565           74 -NEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKG----  142 (188)
Q Consensus        74 -~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~----  142 (188)
                       +..+.++++|||.++.....     ..+.+-+..|.|||      ++.++|+||||+++|+|++|+.||.....+    
T Consensus       449 ~~~~g~lrltyFG~a~~~~~~-----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~  523 (612)
T KOG0603|consen  449 DGSAGHLRLTYFGFWSELERS-----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIH  523 (612)
T ss_pred             cCCCCcEEEEEechhhhCchh-----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHH
Confidence             58889999999998754321     22334456678887      799999999999999999999998654332    


Q ss_pred             ------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          143 ------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       143 ------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                            .+....+....+++.+||+.+|.+||+++++..
T Consensus       524 ~~i~~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~  562 (612)
T KOG0603|consen  524 TRIQMPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGA  562 (612)
T ss_pred             HhhcCCccccccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence                  233566788999999999999999999999875

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.96  E-value=3.6e-29  Score=191.64  Aligned_cols=164  Identities=21%  Similarity=0.240  Sum_probs=132.4

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc--c-----------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE--E-----------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~--~-----------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +.+++||||+++.+.   .+..++++||+++++|.+++ ...  .           |++.|+.|||+   .+++|+|++|
T Consensus        47 l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p  123 (277)
T cd05577          47 LEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQ---RRIVYRDLKP  123 (277)
T ss_pred             HHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCH
Confidence            567889999999887   77899999999999999988 322  1           89999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC-
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK-  141 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~-  141 (188)
                      .||+++.++.++++|||.+.....   ........++..|++||      ++.++|+||||+++|++++|..||..... 
T Consensus       124 ~Nil~~~~~~~~l~dfg~~~~~~~---~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~  200 (277)
T cd05577         124 ENVLLDDHGNVRISDLGLAVELKG---GKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEK  200 (277)
T ss_pred             HHEEECCCCCEEEccCcchhhhcc---CCccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccc
Confidence            999999999999999998765321   11122334566788888      46789999999999999999999865322 


Q ss_pred             --------------CCcCHHHHHHHHHHHHHccCcCCCCCC-----CHHHHHH
Q 039565          142 --------------GEFDIISVEKAVEIAMASVSSKVNRRP-----LMNQVVM  175 (188)
Q Consensus       142 --------------~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~i~~  175 (188)
                                    ...+...+..+.+++.+||+.+|.+||     ++.+++.
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~  253 (277)
T cd05577         201 VEKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE  253 (277)
T ss_pred             ccHHHHHhccccccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence                          112233466889999999999999999     6666764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.96  E-value=3.3e-29  Score=189.29  Aligned_cols=165  Identities=21%  Similarity=0.280  Sum_probs=132.7

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc----c---------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE----E---------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~----~---------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +++++||||+++++.   ....++++||+++++|.+++ ...    .         |++.||.|||+   .+++|+|++|
T Consensus        53 l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~  129 (257)
T cd08225          53 LAKMKHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHD---RKILHRDIKS  129 (257)
T ss_pred             HHhCCCCChhhhhheeccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCH
Confidence            467889999999988   77889999999999999998 221    1         89999999999   9999999999


Q ss_pred             CcEEEccCC-ceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC
Q 039565           69 TNILLNEKV-QAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK  141 (188)
Q Consensus        69 ~nill~~~~-~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~  141 (188)
                      .||+++.++ .++++|||.+.....  .........|+..|++||      .+.++|+||||++++++++|..||.....
T Consensus       130 ~nil~~~~~~~~~l~d~~~~~~~~~--~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~  207 (257)
T cd08225         130 QNIFLSKNGMVAKLGDFGIARQLND--SMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNL  207 (257)
T ss_pred             HHEEEcCCCCeEEecccccchhccC--CcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccH
Confidence            999999885 469999998865431  111222345777899998      46789999999999999999998864321


Q ss_pred             ------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 ------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 ------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                  .......+..+.+++.+|++.+|++|||++++++
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~  253 (257)
T cd08225         208 HQLVLKICQGYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSILK  253 (257)
T ss_pred             HHHHHHHhcccCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence                        1122234567999999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.96  E-value=3.5e-29  Score=193.52  Aligned_cols=169  Identities=14%  Similarity=0.133  Sum_probs=129.1

Q ss_pred             cccccCCCeeeeccc---C----CccEEEEecCCCCChhhhcCC---cc---------cHHHHHHHHhcCCCCCcEEeCC
Q 039565            6 RNKLTGPLLVELIGK---Q----KNNALELGFRGNPELVDQQGK---EE---------VCCPGLEYLHQGLKHPIIQRDM   66 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~----~~~~lv~e~~~~~~L~~~~~~---~~---------~i~~~l~~Lh~~~~~~i~h~dl   66 (188)
                      +..++|+|++++++.   .    ...+++++++.. ++.+.+..   .+         |++.||.|||+   .+++||||
T Consensus        77 ~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiHrDi  152 (294)
T PHA02882         77 IHNIDHLGIPKYYGCGSFKRCRMYYRFILLEKLVE-NTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHE---HGISHGDI  152 (294)
T ss_pred             hccCCCCCCCcEEEeeeEecCCceEEEEEEehhcc-CHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCC
Confidence            456789999999987   1    134677777653 55555511   11         99999999999   99999999


Q ss_pred             CCCcEEEccCCceEEecccCcccccCCCCC-----cceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCcc
Q 039565           67 KSTNILLNEKVQAKLADFGQSRISPVEGGT-----HMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILT  135 (188)
Q Consensus        67 ~~~nill~~~~~~kl~d~~~~~~~~~~~~~-----~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p  135 (188)
                      ||+||+++.++.++++|||+++........     .......|++.|++||      ++.++|+|||||++|++++|..|
T Consensus       153 Kp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P  232 (294)
T PHA02882        153 KPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLP  232 (294)
T ss_pred             CHHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence            999999999999999999998754321111     1122346889999988      68899999999999999999999


Q ss_pred             ccccCCCC-------------------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHh
Q 039565          136 VDLSFKGE-------------------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVRE  178 (188)
Q Consensus       136 ~~~~~~~~-------------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~  178 (188)
                      |.......                   .....+..+.+++..|++.+|++||++++|++.|+
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~  294 (294)
T PHA02882        233 WKGFGHNGNLIHAAKCDFIKRLHEGKIKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD  294 (294)
T ss_pred             CCccccchHHHHHhHHHHHHHhhhhhhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence            96442110                   01123456889999999999999999999998764

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=4.4e-29  Score=194.45  Aligned_cols=167  Identities=24%  Similarity=0.273  Sum_probs=133.5

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-c-c------------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-E-E------------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~-~------------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +.+++||||+++++.   ....++++||+.+++|.+++.+ . .            |++.||+|||+   .+++|+||||
T Consensus        55 l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp  131 (316)
T cd05574          55 LATLDHPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHL---LGIVYRDLKP  131 (316)
T ss_pred             HHhCCCCCchhheeeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCh
Confidence            567889999999988   7788999999999999999832 1 1            99999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCC---------------------------cceeeecccccccCCC------CCC
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGT---------------------------HMSTTIAGTAGFLNTE------LTE  115 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~pe------~~~  115 (188)
                      +||+++.++.++++|||++.........                           .......|+..|++||      .+.
T Consensus       132 ~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~  211 (316)
T cd05574         132 ENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGS  211 (316)
T ss_pred             HHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCc
Confidence            9999999999999999987643211100                           0111245677899998      577


Q ss_pred             ccchHHHHHHHHHHHhCCccccccCC-----------CCcCH--HHHHHHHHHHHHccCcCCCCCCC----HHHHHH
Q 039565          116 KSDVDSFEIVILEIITGILTVDLSFK-----------GEFDI--ISVEKAVEIAMASVSSKVNRRPL----MNQVVM  175 (188)
Q Consensus       116 ~~di~s~G~~l~~~~~g~~p~~~~~~-----------~~~~~--~~~~~~~~l~~~cl~~~p~~Rps----~~~i~~  175 (188)
                      ++|+||||+++|++++|..||.....           ...+.  ..+..+.+++.+||..+|++|||    +++++.
T Consensus       212 ~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~  288 (316)
T cd05574         212 AVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ  288 (316)
T ss_pred             hHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence            89999999999999999999853321           11111  24678999999999999999999    777776

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.96  E-value=5.6e-29  Score=191.70  Aligned_cols=164  Identities=18%  Similarity=0.221  Sum_probs=127.7

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++|+||+++.++   ....++++||+. +++.+++ .+..            |++.||.|||+   .+++|+||||+
T Consensus        57 l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~  132 (291)
T cd07870          57 LKGLKHANIVLLHDIIHTKETLTFVFEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHG---QHILHRDLKPQ  132 (291)
T ss_pred             HHhcCCCCEeEEEEEEecCCeEEEEEeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChH
Confidence            567899999999998   678899999997 6777766 3211            99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCCC
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFKG  142 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~  142 (188)
                      ||+++.++.++|+|||+++.......  ......++..|++||       ++.++|+||||+++|++++|..||+.....
T Consensus       133 Nil~~~~~~~~l~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~  210 (291)
T cd07870         133 NLLISYLGELKLADFGLARAKSIPSQ--TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDV  210 (291)
T ss_pred             HEEEcCCCcEEEeccccccccCCCCC--CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhH
Confidence            99999999999999998864321111  122234567788998       255789999999999999999988532110


Q ss_pred             ------------------------------C---------c-----CHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          143 ------------------------------E---------F-----DIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       143 ------------------------------~---------~-----~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                                    +         .     .......+.+++..|+..+|.+|||+++++.
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~  287 (291)
T cd07870         211 FEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL  287 (291)
T ss_pred             HHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence                                          0         0     0011346789999999999999999999874

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.96  E-value=3.1e-29  Score=189.19  Aligned_cols=163  Identities=21%  Similarity=0.277  Sum_probs=135.2

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-----cc-----------cHHHHHHHHhcCCCCCcEEeCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-----EE-----------VCCPGLEYLHQGLKHPIIQRDM   66 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-----~~-----------~i~~~l~~Lh~~~~~~i~h~dl   66 (188)
                      +++++||||+++.+.   ....++++||+++++|..++.+     ..           |++.||+|||+   .+++|+|+
T Consensus        53 l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~---~~i~h~~l  129 (256)
T cd08530          53 LASVNHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHE---QKILHRDL  129 (256)
T ss_pred             HHhCCCCCchhhhhhhccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCC
Confidence            567889999999888   7889999999999999998822     11           89999999999   99999999


Q ss_pred             CCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           67 KSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        67 ~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      +|.||+++.++.++++|||++......    ......++..|++||      ++.++|+||||++++++++|..||+...
T Consensus       130 ~~~ni~~~~~~~~kl~d~g~~~~~~~~----~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~  205 (256)
T cd08530         130 KSANILLVANDLVKIGDLGISKVLKKN----MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARS  205 (256)
T ss_pred             CcceEEEecCCcEEEeeccchhhhccC----CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            999999999999999999998764322    122244667788888      5678999999999999999999986433


Q ss_pred             C------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          141 K------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       141 ~------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      .            ...+......+.+++..|++.+|++|||+.++++
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  252 (256)
T cd08530         206 MQDLRYKVQRGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA  252 (256)
T ss_pred             HHHHHHHHhcCCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            2            2233456678999999999999999999999986

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.96  E-value=2e-29  Score=198.00  Aligned_cols=166  Identities=17%  Similarity=0.195  Sum_probs=131.2

Q ss_pred             cccccCCCeeeeccc-------CCccEEEEecCCCCChhhhcC-Ccc-----------cHHHHHHHHhcCCCCCcEEeCC
Q 039565            6 RNKLTGPLLVELIGK-------QKNNALELGFRGNPELVDQQG-KEE-----------VCCPGLEYLHQGLKHPIIQRDM   66 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-------~~~~~lv~e~~~~~~L~~~~~-~~~-----------~i~~~l~~Lh~~~~~~i~h~dl   66 (188)
                      +.+++||||+++.++       ....++++||+. ++|.+++. ...           |++.||.|||+   .+++|+|+
T Consensus        58 l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dl  133 (334)
T cd07855          58 LRHFKHDNIIAIRDILRPPGADFKDVYVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHS---ANVIHRDL  133 (334)
T ss_pred             HHhcCCCCccCHHHhccccCCCCceEEEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCC
Confidence            567889999999886       346799999997 68988882 222           99999999999   99999999


Q ss_pred             CCCcEEEccCCceEEecccCcccccCCCCC--cceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCcccc
Q 039565           67 KSTNILLNEKVQAKLADFGQSRISPVEGGT--HMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVD  137 (188)
Q Consensus        67 ~~~nill~~~~~~kl~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~  137 (188)
                      +|+||+++.++.++++|||++.........  .......++..|++||       .+.++|+||||+++|++++|..||.
T Consensus       134 kp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~  213 (334)
T cd07855         134 KPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFP  213 (334)
T ss_pred             CHHHEEEcCCCcEEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccC
Confidence            999999999999999999998754322111  1122346777888998       3578999999999999999999985


Q ss_pred             ccCC-------------------------------------CCcC-----HHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          138 LSFK-------------------------------------GEFD-----IISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       138 ~~~~-------------------------------------~~~~-----~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ....                                     ...+     ...+..+.+++.+|++.+|++|||+++++.
T Consensus       214 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  293 (334)
T cd07855         214 GKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ  293 (334)
T ss_pred             CCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            4211                                     0000     123567899999999999999999999887

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.96  E-value=1.2e-28  Score=192.37  Aligned_cols=163  Identities=25%  Similarity=0.261  Sum_probs=131.0

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc--CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ--GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~--~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +++++|||+++++++   ....++++||+. |+|.+.+  ....           |++.|+.|||+   .+++|+|++|.
T Consensus        79 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~---~~i~H~dL~p~  154 (317)
T cd06635          79 LQRIKHPNSIEYKGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAG  154 (317)
T ss_pred             HHhCCCCCEEEEEEEEeeCCeEEEEEeCCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcc
Confidence            467899999999998   778899999998 4777766  2221           89999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC---------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE---------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe---------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      ||+++.++.++++|||++....      ......++..|++||         .+.++|+||||+++|++++|..||....
T Consensus       155 Nil~~~~~~~kl~dfg~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~  228 (317)
T cd06635         155 NILLTEPGQVKLADFGSASIAS------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN  228 (317)
T ss_pred             cEEECCCCCEEEecCCCccccC------CcccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCcc
Confidence            9999999999999999876432      122345677788888         3567999999999999999998875422


Q ss_pred             C-------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHh
Q 039565          141 K-------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVRE  178 (188)
Q Consensus       141 ~-------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~  178 (188)
                      .             .......+..+.+++.+||+.+|.+||++.++++..-
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~  279 (317)
T cd06635         229 AMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMF  279 (317)
T ss_pred             HHHHHHHHHhccCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChh
Confidence            1             1112245567899999999999999999999998543

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.96  E-value=4.3e-29  Score=192.91  Aligned_cols=165  Identities=19%  Similarity=0.189  Sum_probs=134.0

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc--c---------cHHHHHHHHhcCCCCCcEEeCCCCCcE
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE--E---------VCCPGLEYLHQGLKHPIIQRDMKSTNI   71 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~--~---------~i~~~l~~Lh~~~~~~i~h~dl~~~ni   71 (188)
                      +++++||||+++++.   .+..++++||+++++|.+++...  .         |++.|++|||+   .+++|+|++|.||
T Consensus        71 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~---~givH~dl~p~Ni  147 (292)
T cd06657          71 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHA---QGVIHRDIKSDSI  147 (292)
T ss_pred             HHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHE
Confidence            567899999999988   88999999999999999988222  2         99999999999   8999999999999


Q ss_pred             EEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC----
Q 039565           72 LLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK----  141 (188)
Q Consensus        72 ll~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~----  141 (188)
                      +++.++.++++|||.+.......  .......++..|++||      ++.++|+||||+++|++++|..||.....    
T Consensus       148 lv~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~  225 (292)
T cd06657         148 LLTHDGRVKLSDFGFCAQVSKEV--PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM  225 (292)
T ss_pred             EECCCCCEEEcccccceeccccc--ccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            99999999999999876443111  1123345777889998      46789999999999999999998753211    


Q ss_pred             --------CC--cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 --------GE--FDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 --------~~--~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                              ..  .....+..+.+++.+||+.+|.+||++.++++
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~  269 (292)
T cd06657         226 KMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  269 (292)
T ss_pred             HHHHhhCCcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence                    11  11124567889999999999999999999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>PTZ00284 protein kinase; Provisional

Probab=99.96  E-value=4.2e-29  Score=204.41  Aligned_cols=159  Identities=20%  Similarity=0.238  Sum_probs=122.1

Q ss_pred             ccCCCeeeeccc----CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCcEE
Q 039565            9 LTGPLLVELIGK----QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTNIL   72 (188)
Q Consensus         9 l~Hpniv~~~~~----~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~nil   72 (188)
                      .+|+++++++++    ..+.++++|++. ++|.+++ +...           |++.||.|||+  +.+|+||||||+||+
T Consensus       188 ~~~~~i~~i~~~~~~~~~~~~iv~~~~g-~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~--~~gIiHrDlKP~NIL  264 (467)
T PTZ00284        188 ADRFPLMKIQRYFQNETGHMCIVMPKYG-PCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHT--ELHLMHTDLKPENIL  264 (467)
T ss_pred             ccCcceeeeEEEEEcCCceEEEEEeccC-CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh--cCCeecCCCCHHHEE
Confidence            345668888777    457889999884 6888887 3221           99999999997  149999999999999


Q ss_pred             EccCC----------------ceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHH
Q 039565           73 LNEKV----------------QAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEII  130 (188)
Q Consensus        73 l~~~~----------------~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~  130 (188)
                      ++.++                .+||+|||.+....     .......|+..|+|||      ++.++|||||||++|+|+
T Consensus       265 l~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~-----~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~ell  339 (467)
T PTZ00284        265 METSDTVVDPVTNRALPPDPCRVRICDLGGCCDER-----HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELY  339 (467)
T ss_pred             EecCCcccccccccccCCCCceEEECCCCccccCc-----cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHH
Confidence            98765                48999999875321     1233467889999999      678899999999999999


Q ss_pred             hCCccccccCCCC-----------cC---------------------------H---------------HHHHHHHHHHH
Q 039565          131 TGILTVDLSFKGE-----------FD---------------------------I---------------ISVEKAVEIAM  157 (188)
Q Consensus       131 ~g~~p~~~~~~~~-----------~~---------------------------~---------------~~~~~~~~l~~  157 (188)
                      +|+.||+.....+           .+                           .               .....+.+++.
T Consensus       340 tG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~  419 (467)
T PTZ00284        340 TGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIY  419 (467)
T ss_pred             hCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHH
Confidence            9999996422100           00                           0               01234679999


Q ss_pred             HccCcCCCCCCCHHHHHH
Q 039565          158 ASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       158 ~cl~~~p~~Rps~~~i~~  175 (188)
                      .||+.||++|||++|+++
T Consensus       420 ~mL~~dP~~R~ta~e~L~  437 (467)
T PTZ00284        420 GLLHYDRQKRLNARQMTT  437 (467)
T ss_pred             HhCCcChhhCCCHHHHhc
Confidence            999999999999999987

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.96  E-value=1.8e-29  Score=198.20  Aligned_cols=166  Identities=20%  Similarity=0.219  Sum_probs=129.8

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-c-c-----------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-E-E-----------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~-~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +..++||||+++++.   .+..++||||+++|+|.+++.+ . .           |++.||.|||+   .+++||||||+
T Consensus        55 l~~~~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~---~~iiHrDlkp~  131 (331)
T cd05624          55 LVNGDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQ---LHYVHRDIKPD  131 (331)
T ss_pred             HHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCchH
Confidence            345789999999888   7888999999999999999922 1 1           99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-----------CCCccchHHHHHHHHHHHhCCccccc
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-----------LTEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-----------~~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      ||+++.++.+||+|||++..... ..........|+..|+|||           ++.++|+||||+++|+|++|..||..
T Consensus       132 Nill~~~~~~kl~DfG~a~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~  210 (331)
T cd05624         132 NVLLDMNGHIRLADFGSCLKMNQ-DGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA  210 (331)
T ss_pred             HEEEcCCCCEEEEeccceeeccC-CCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccC
Confidence            99999999999999999875431 1111223356889999998           34679999999999999999999854


Q ss_pred             cCC-------------CCcC---HHHHHHHHHHHHHccCcCCCC--CCCHHHHHH
Q 039565          139 SFK-------------GEFD---IISVEKAVEIAMASVSSKVNR--RPLMNQVVM  175 (188)
Q Consensus       139 ~~~-------------~~~~---~~~~~~~~~l~~~cl~~~p~~--Rps~~~i~~  175 (188)
                      ...             ...+   ...+..+.+++..|+...+.+  |++++++++
T Consensus       211 ~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~  265 (331)
T cd05624         211 ESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKK  265 (331)
T ss_pred             CCHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence            211             0111   123578889999988865544  467888765

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.96  E-value=4.6e-29  Score=191.16  Aligned_cols=162  Identities=24%  Similarity=0.296  Sum_probs=129.0

Q ss_pred             ccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CC--c----c---------cHHHHHHHHhcCCCC-CcEEeCC
Q 039565            7 NKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GK--E----E---------VCCPGLEYLHQGLKH-PIIQRDM   66 (188)
Q Consensus         7 ~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~--~----~---------~i~~~l~~Lh~~~~~-~i~h~dl   66 (188)
                      +..+||||+++++.   ....++++||++ ++|.+++ ..  .    .         |++.||.|||+   . +++|+|+
T Consensus        55 ~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~~i~h~dl  130 (283)
T cd06617          55 RSVDCPYTVTFYGALFREGDVWICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHS---KLSVIHRDV  130 (283)
T ss_pred             HHcCCCCeeeeeEEEecCCcEEEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCC
Confidence            45689999999998   778999999997 6887776 21  1    1         99999999998   6 9999999


Q ss_pred             CCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC----------CCCccchHHHHHHHHHHHhCCccc
Q 039565           67 KSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE----------LTEKSDVDSFEIVILEIITGILTV  136 (188)
Q Consensus        67 ~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe----------~~~~~di~s~G~~l~~~~~g~~p~  136 (188)
                      +|+||+++.++.+|++|||.+......   .......++..|++||          ++.++|+||||+++|++++|..||
T Consensus       131 kp~nil~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~  207 (283)
T cd06617         131 KPSNVLINRNGQVKLCDFGISGYLVDS---VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPY  207 (283)
T ss_pred             CHHHEEECCCCCEEEeecccccccccc---cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCC
Confidence            999999999999999999998754211   1122245677788888          256799999999999999999998


Q ss_pred             cccCC-------------CCcC-HHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          137 DLSFK-------------GEFD-IISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       137 ~~~~~-------------~~~~-~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      +....             ...+ ...+..+.+++..||..+|.+||+++++++
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~  260 (283)
T cd06617         208 DSWKTPFQQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ  260 (283)
T ss_pred             CccccCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            63211             1111 234578899999999999999999999987

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.96  E-value=3.7e-29  Score=194.51  Aligned_cols=166  Identities=17%  Similarity=0.175  Sum_probs=128.4

Q ss_pred             cccccCCCeeeeccc---C--CccEEEEecCCCCChhhhcC-----Cc---c---------cHHHHHHHHhcCCCCCcEE
Q 039565            6 RNKLTGPLLVELIGK---Q--KNNALELGFRGNPELVDQQG-----KE---E---------VCCPGLEYLHQGLKHPIIQ   63 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~--~~~~lv~e~~~~~~L~~~~~-----~~---~---------~i~~~l~~Lh~~~~~~i~h   63 (188)
                      +.+++||||++++++   .  ...++|+||+++ +|.+++.     ..   .         |++.||.|||+   .+++|
T Consensus        56 l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~h  131 (316)
T cd07842          56 LRELKHENVVSLVEVFLEHADKSVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHS---NWVLH  131 (316)
T ss_pred             HHhcCCCCccceEEEEeCCCCceEEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHh---CCEee
Confidence            467899999999998   4  678999999985 6666551     11   1         89999999999   99999


Q ss_pred             eCCCCCcEEEcc----CCceEEecccCcccccCCCC-CcceeeecccccccCCC-------CCCccchHHHHHHHHHHHh
Q 039565           64 RDMKSTNILLNE----KVQAKLADFGQSRISPVEGG-THMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIIT  131 (188)
Q Consensus        64 ~dl~~~nill~~----~~~~kl~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~  131 (188)
                      +|++|+||+++.    ++.+|++|||++........ ........++..|++||       ++.++|+||||++++++++
T Consensus       132 ~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~  211 (316)
T cd07842         132 RDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLT  211 (316)
T ss_pred             CCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHh
Confidence            999999999999    89999999998875432211 11122345677889998       3677999999999999999


Q ss_pred             CCccccccCCCC----------------------------------------------cC-----H------HHHHHHHH
Q 039565          132 GILTVDLSFKGE----------------------------------------------FD-----I------ISVEKAVE  154 (188)
Q Consensus       132 g~~p~~~~~~~~----------------------------------------------~~-----~------~~~~~~~~  154 (188)
                      |..||.......                                              .+     .      ..+..+.+
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (316)
T cd07842         212 LEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFD  291 (316)
T ss_pred             cCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHH
Confidence            998885322111                                              00     0      12346889


Q ss_pred             HHHHccCcCCCCCCCHHHHHH
Q 039565          155 IAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       155 l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ++.+|++.+|++|||++++++
T Consensus       292 ~i~~~l~~~P~~Rps~~eil~  312 (316)
T cd07842         292 LLRKLLEYDPTKRITAEEALE  312 (316)
T ss_pred             HHHHHhcCCcccCcCHHHHhc
Confidence            999999999999999999975

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.96  E-value=4.1e-29  Score=187.43  Aligned_cols=154  Identities=20%  Similarity=0.138  Sum_probs=124.7

Q ss_pred             ccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCcEEE
Q 039565            9 LTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTNILL   73 (188)
Q Consensus         9 l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~nill   73 (188)
                      ..||||+++++.   .+..+++|||+++++|.+++ +...           |++.||.|||+   .+++|+|+||+||++
T Consensus        42 ~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nil~  118 (237)
T cd05576          42 HCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVALDALHR---EGIVCRDLNPNNILL  118 (237)
T ss_pred             cCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEE
Confidence            469999999998   77889999999999999988 2211           89999999999   999999999999999


Q ss_pred             ccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC------
Q 039565           74 NEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK------  141 (188)
Q Consensus        74 ~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~------  141 (188)
                      +.++.++++|||.+......     .....++..|++||      ++.++|+||+|+++|++++|..|++....      
T Consensus       119 ~~~~~~~l~df~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~~~~  193 (237)
T cd05576         119 DDRGHIQLTYFSRWSEVEDS-----CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGINTHT  193 (237)
T ss_pred             cCCCCEEEecccchhccccc-----cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhccccc
Confidence            99999999999976543211     12233455688888      46789999999999999999977653221      


Q ss_pred             -CCcCHHHHHHHHHHHHHccCcCCCCCCCH
Q 039565          142 -GEFDIISVEKAVEIAMASVSSKVNRRPLM  170 (188)
Q Consensus       142 -~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  170 (188)
                       ...+...+..+.+++.+|++.||.+||++
T Consensus       194 ~~~~~~~~~~~~~~li~~~l~~dp~~R~~~  223 (237)
T cd05576         194 TLNIPEWVSEEARSLLQQLLQFNPTERLGA  223 (237)
T ss_pred             ccCCcccCCHHHHHHHHHHccCCHHHhcCC
Confidence             12334456789999999999999999986

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.96  E-value=3.7e-29  Score=191.79  Aligned_cols=164  Identities=20%  Similarity=0.214  Sum_probs=129.5

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc----c---------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE----E---------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~----~---------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +++++|||++++++.   ....++++||++ ++|.+++ ...    .         |++.||.|||+   .+++|+|++|
T Consensus        52 l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~---~~~~H~dl~p  127 (283)
T cd07835          52 LKELNHPNIVRLLDVVHSENKLYLVFEFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHS---HRVLHRDLKP  127 (283)
T ss_pred             HHhcCCCCccCHhheeccCCeEEEEEeccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCH
Confidence            567889999999999   788899999996 6899988 322    1         89999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCC
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFK  141 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~  141 (188)
                      +||+++.++.++++|||.+........  ......++..|++||       ++.++|+||||+++|++++|..||.....
T Consensus       128 ~nil~~~~~~~~l~df~~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~  205 (283)
T cd07835         128 QNLLIDREGALKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSE  205 (283)
T ss_pred             HHEEEcCCCcEEEeecccccccCCCcc--ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence            999999999999999999875432111  112224567788998       36679999999999999999988742210


Q ss_pred             C----------------------------------------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 G----------------------------------------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 ~----------------------------------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      .                                        ......+..+.+++.+|++.+|++|||++++++
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~  279 (283)
T cd07835         206 IDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ  279 (283)
T ss_pred             HHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            0                                        000112357889999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.96  E-value=6.5e-29  Score=188.28  Aligned_cols=164  Identities=21%  Similarity=0.301  Sum_probs=132.4

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC----cc------------cHHHHHHHHhcCCCCCcEEeCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK----EE------------VCCPGLEYLHQGLKHPIIQRDM   66 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~----~~------------~i~~~l~~Lh~~~~~~i~h~dl   66 (188)
                      +.+++||||+++++.   ....++++||+++++|..++..    ..            |++.|+.|||+   .+++|+|+
T Consensus        56 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~~l  132 (260)
T cd08222          56 LSKLDHPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQ---RRILHRDL  132 (260)
T ss_pred             HHhCCCCcHHHHHHHHhcCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH---cCccccCC
Confidence            457789999999988   7788999999999999987721    11            89999999999   99999999


Q ss_pred             CCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           67 KSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        67 ~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      +|+|++++. +.++++|||++.....  .........++..|++||      ++.++|+||||+++|++++|..||+...
T Consensus       133 ~~~nili~~-~~~~l~d~g~~~~~~~--~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~  209 (260)
T cd08222         133 KAKNIFLKN-NLLKIGDFGVSRLLMG--SCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN  209 (260)
T ss_pred             ChhheEeec-CCEeecccCceeecCC--CcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc
Confidence            999999975 5699999998875421  111223345677788888      4678999999999999999998885321


Q ss_pred             ------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          141 ------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       141 ------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                  ....+...+..+.+++.+||+.+|++||++.++++
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  256 (260)
T cd08222         210 FLSVVLRIVEGPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR  256 (260)
T ss_pred             HHHHHHHHHcCCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence                        12234456678999999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.96  E-value=1.2e-28  Score=188.78  Aligned_cols=161  Identities=22%  Similarity=0.238  Sum_probs=127.3

Q ss_pred             ccc-cCCCeeeeccc---C--CccEEEEecCCCCChhhhc-CCc---c---------cHHHHHHHHhcCCCCCcEEeCCC
Q 039565            7 NKL-TGPLLVELIGK---Q--KNNALELGFRGNPELVDQQ-GKE---E---------VCCPGLEYLHQGLKHPIIQRDMK   67 (188)
Q Consensus         7 ~~l-~Hpniv~~~~~---~--~~~~lv~e~~~~~~L~~~~-~~~---~---------~i~~~l~~Lh~~~~~~i~h~dl~   67 (188)
                      .++ +|||+++++++   .  +..++|+||+. ++|.+++ .+.   .         |++.||.|||+   .+++|+|++
T Consensus        52 ~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~  127 (282)
T cd07831          52 RRLSPHPNILRLIEVLFDRKTGRLALVFELMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHR---NGIFHRDIK  127 (282)
T ss_pred             hhcCCCCCccceEEEEecCCCCcEEEEEecCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCceecccC
Confidence            345 49999999998   4  78899999998 5787777 322   1         99999999999   999999999


Q ss_pred             CCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           68 STNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        68 ~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      |.||+++. +.++++|||++.......   ......++..|++||       .+.++|+||||+++|+|++|..||....
T Consensus       128 p~ni~l~~-~~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~  203 (282)
T cd07831         128 PENILIKD-DILKLADFGSCRGIYSKP---PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTN  203 (282)
T ss_pred             HHHEEEcC-CCeEEEecccccccccCC---CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCC
Confidence            99999999 999999999987542111   112245677888998       3678999999999999999998885321


Q ss_pred             CC-----------------------------Cc-----------CHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          141 KG-----------------------------EF-----------DIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       141 ~~-----------------------------~~-----------~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ..                             .+           ....+..+.+++..||+.+|++||+++++++
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~  278 (282)
T cd07831         204 ELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR  278 (282)
T ss_pred             HHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence            10                             00           0123578999999999999999999999986

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.96  E-value=1.5e-28  Score=194.56  Aligned_cols=163  Identities=19%  Similarity=0.247  Sum_probs=128.7

Q ss_pred             cccccCCCeeeeccc---C------CccEEEEecCCCCChhhhc-CCcc---------cHHHHHHHHhcCCCCCcEEeCC
Q 039565            6 RNKLTGPLLVELIGK---Q------KNNALELGFRGNPELVDQQ-GKEE---------VCCPGLEYLHQGLKHPIIQRDM   66 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~------~~~~lv~e~~~~~~L~~~~-~~~~---------~i~~~l~~Lh~~~~~~i~h~dl   66 (188)
                      +.+++||||++++++   .      ...++|+||+. ++|...+ ....         |++.||+|||+   .+++|+||
T Consensus        69 l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dl  144 (353)
T cd07850          69 MKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMDLDHERMSYLLYQMLCGIKHLHS---AGIIHRDL  144 (353)
T ss_pred             HHhcCCCCCcceeeeeccCCCccccCcEEEEEeccC-CCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCC
Confidence            567899999999987   1      34699999997 4888877 2222         99999999999   99999999


Q ss_pred             CCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           67 KSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        67 ~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      ||+||+++.++.++++|||.+.....   ........++..|++||      ++.++|+||||+++|+|++|..||....
T Consensus       145 kp~Nil~~~~~~~kL~Dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~  221 (353)
T cd07850         145 KPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTD  221 (353)
T ss_pred             CHHHEEECCCCCEEEccCccceeCCC---CCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCC
Confidence            99999999999999999999875421   11122345677899998      6788999999999999999998874221


Q ss_pred             C------------CC------------------------------------------cCHHHHHHHHHHHHHccCcCCCC
Q 039565          141 K------------GE------------------------------------------FDIISVEKAVEIAMASVSSKVNR  166 (188)
Q Consensus       141 ~------------~~------------------------------------------~~~~~~~~~~~l~~~cl~~~p~~  166 (188)
                      .            ..                                          .....+..+.+++..||+.+|.+
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  301 (353)
T cd07850         222 HIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEK  301 (353)
T ss_pred             HHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhh
Confidence            0            00                                          00123456789999999999999


Q ss_pred             CCCHHHHHH
Q 039565          167 RPLMNQVVM  175 (188)
Q Consensus       167 Rps~~~i~~  175 (188)
                      |||+.++++
T Consensus       302 R~t~~eiL~  310 (353)
T cd07850         302 RISVDDALQ  310 (353)
T ss_pred             CcCHHHHhc
Confidence            999999986

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.96  E-value=5.5e-29  Score=195.85  Aligned_cols=171  Identities=17%  Similarity=0.186  Sum_probs=133.4

Q ss_pred             cccccCCCeeeeccc---C-----CccEEEEecCCCCChhhhcCCc-c-----------cHHHHHHHHhcCCCCCcEEeC
Q 039565            6 RNKLTGPLLVELIGK---Q-----KNNALELGFRGNPELVDQQGKE-E-----------VCCPGLEYLHQGLKHPIIQRD   65 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~-----~~~~lv~e~~~~~~L~~~~~~~-~-----------~i~~~l~~Lh~~~~~~i~h~d   65 (188)
                      +++++||||++++++   .     ...++++||+. ++|.+++... .           |++.||.|||+   .+++|+|
T Consensus        58 l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~d  133 (337)
T cd07858          58 LRHLDHENVIAIKDIMPPPHREAFNDVYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHS---ANVLHRD  133 (337)
T ss_pred             HHhcCCCCccchHHheecccccccCcEEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCC
Confidence            457899999999987   1     34799999997 6888888322 2           99999999999   9999999


Q ss_pred             CCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccc
Q 039565           66 MKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        66 l~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      ++|+||+++.++.++|+|||++.......  .......++..|++||       ++.++|+||||+++|++++|..||..
T Consensus       134 lkp~Nil~~~~~~~kL~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~  211 (337)
T cd07858         134 LKPSNLLLNANCDLKICDFGLARTTSEKG--DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPG  211 (337)
T ss_pred             CCHHHEEEcCCCCEEECcCccccccCCCc--ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCC
Confidence            99999999999999999999987543211  1223345677888888       45789999999999999999988853


Q ss_pred             cCC----------------C--------------------------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          139 SFK----------------G--------------------------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       139 ~~~----------------~--------------------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                      ...                .                          ......+..+.+++.+||+.+|++|||++++++.
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h  291 (337)
T cd07858         212 KDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH  291 (337)
T ss_pred             CChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence            210                0                          0011234567899999999999999999999985


Q ss_pred             --HhhccC
Q 039565          177 --REQGSG  182 (188)
Q Consensus       177 --l~~~~~  182 (188)
                        ++...+
T Consensus       292 ~~~~~~~~  299 (337)
T cd07858         292 PYLASLHD  299 (337)
T ss_pred             cchhhhcC
Confidence              655443

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.96  E-value=8e-29  Score=191.12  Aligned_cols=164  Identities=18%  Similarity=0.196  Sum_probs=127.1

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-------------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-------------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-------------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +++++||||++++++   ....++|+||++ ++|..++ ....             |++.||.|||+   .+++|+|++|
T Consensus        55 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dl~p  130 (294)
T PLN00009         55 LKEMQHGNIVRLQDVVHSEKRLYLVFEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHS---HRVLHRDLKP  130 (294)
T ss_pred             HHhccCCCEeeEEEEEecCCeEEEEEeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCc
Confidence            567899999999999   788999999997 5787776 2111             89999999999   9999999999


Q ss_pred             CcEEEcc-CCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           69 TNILLNE-KVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        69 ~nill~~-~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      +||+++. ++.+|++|||++......  ........++..|++||       ++.++|+||||+++|++++|..||....
T Consensus       131 ~nill~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~  208 (294)
T PLN00009        131 QNLLIDRRTNALKLADFGLARAFGIP--VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDS  208 (294)
T ss_pred             ceEEEECCCCEEEEcccccccccCCC--ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            9999985 457899999998754211  11112234566788887       3668999999999999999998884321


Q ss_pred             CC------------------------------------C----cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          141 KG------------------------------------E----FDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       141 ~~------------------------------------~----~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ..                                    .    .....+..+.+++.+|++.+|++||+++++++
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~  283 (294)
T PLN00009        209 EIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE  283 (294)
T ss_pred             HHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence            00                                    0    00123456789999999999999999999986

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.96  E-value=1e-28  Score=188.98  Aligned_cols=164  Identities=20%  Similarity=0.240  Sum_probs=130.5

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc-c-----------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE-E-----------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~-~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +++++||||++++++   +...++++||+++ +|.+++ ... .           |++.||.|||+   .+++|+|++|.
T Consensus        52 l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~  127 (283)
T cd05118          52 LKELNHPNIIKLLDVFRHKGDLYLVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHS---HGILHRDLKPE  127 (283)
T ss_pred             HHHhcCCCcchHHHhhccCCCEEEEEeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHH---CCeeecCcCHH
Confidence            567889999999998   7888999999985 888887 321 2           99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCC-
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFK-  141 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~-  141 (188)
                      ||+++.++.++++|||.+.......  .......++..|++||       .+.++|+||||+++|++++|..||..... 
T Consensus       128 nili~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~  205 (283)
T cd05118         128 NLLINTEGVLKLADFGLARSFGSPV--RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEI  205 (283)
T ss_pred             HEEECCCCcEEEeeeeeeEecCCCc--ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            9999999999999999887543221  1122234666788888       46789999999999999999988743211 


Q ss_pred             ------------------C----------------------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 ------------------G----------------------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 ------------------~----------------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                        .                      +.....+.++.+++..||+.+|.+||++++++.
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~  279 (283)
T cd05118         206 DQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA  279 (283)
T ss_pred             HHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence                              0                      011124568899999999999999999999985

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.96  E-value=6.8e-29  Score=192.43  Aligned_cols=166  Identities=21%  Similarity=0.211  Sum_probs=127.3

Q ss_pred             cccccCCCeeeeccc---C--------CccEEEEecCCCCChhhhc-CCc---c---------cHHHHHHHHhcCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---Q--------KNNALELGFRGNPELVDQQ-GKE---E---------VCCPGLEYLHQGLKHPI   61 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~--------~~~~lv~e~~~~~~L~~~~-~~~---~---------~i~~~l~~Lh~~~~~~i   61 (188)
                      +++++||||++++++   .        ...++++||+.+ +|.+++ ...   .         |++.||.|||+   .++
T Consensus        65 l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~i  140 (310)
T cd07865          65 LQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHR---NKI  140 (310)
T ss_pred             HHhCCCCCccceEEEEecccccccCCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCe
Confidence            467899999999987   2        345999999984 788777 221   1         99999999999   999


Q ss_pred             EEeCCCCCcEEEccCCceEEecccCcccccCCCCC--cceeeecccccccCCC-------CCCccchHHHHHHHHHHHhC
Q 039565           62 IQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGT--HMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITG  132 (188)
Q Consensus        62 ~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g  132 (188)
                      +|+|++|+||+++.++.++++|||++.........  .......++..|++||       ++.++|+||||+++|++++|
T Consensus       141 ~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~  220 (310)
T cd07865         141 LHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTR  220 (310)
T ss_pred             eccCCCHHHEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhC
Confidence            99999999999999999999999998754322211  1122345667799999       35689999999999999999


Q ss_pred             CccccccCCC----------------------------------Cc---------CHHHHHHHHHHHHHccCcCCCCCCC
Q 039565          133 ILTVDLSFKG----------------------------------EF---------DIISVEKAVEIAMASVSSKVNRRPL  169 (188)
Q Consensus       133 ~~p~~~~~~~----------------------------------~~---------~~~~~~~~~~l~~~cl~~~p~~Rps  169 (188)
                      ..||......                                  ..         +......+.+++.+||+.+|.+|||
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t  300 (310)
T cd07865         221 SPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRID  300 (310)
T ss_pred             CCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccC
Confidence            9877432110                                  00         0011345678999999999999999


Q ss_pred             HHHHHH
Q 039565          170 MNQVVM  175 (188)
Q Consensus       170 ~~~i~~  175 (188)
                      ++++++
T Consensus       301 ~~e~l~  306 (310)
T cd07865         301 ADTALN  306 (310)
T ss_pred             HHHHhc
Confidence            999885

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.96  E-value=9.9e-29  Score=189.44  Aligned_cols=164  Identities=17%  Similarity=0.217  Sum_probs=129.3

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc-----c---------cHHHHHHHHhcCCCCCcEEeCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE-----E---------VCCPGLEYLHQGLKHPIIQRDMK   67 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~-----~---------~i~~~l~~Lh~~~~~~i~h~dl~   67 (188)
                      +.+++||||+++++.   .+..++++||+++ +|.+++ ...     .         |++.||.|||+   .+++|+|++
T Consensus        52 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~h~dl~  127 (284)
T cd07836          52 MKELKHENIVRLHDVIHTENKLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHE---NRVLHRDLK  127 (284)
T ss_pred             HHhhcCCCEeeeeeeEeeCCcEEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCC
Confidence            567899999999998   7788999999995 888877 221     1         99999999999   999999999


Q ss_pred             CCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           68 STNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        68 ~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      |+||++++++.++++|||.+.......  .......++..|++||       ++.++|+||||+++|++++|..||....
T Consensus       128 p~ni~~~~~~~~~l~d~g~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~  205 (284)
T cd07836         128 PQNLLINKRGELKLADFGLARAFGIPV--NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTN  205 (284)
T ss_pred             HHHEEECCCCcEEEeecchhhhhcCCc--cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            999999999999999999886432111  1112234566788888       3678999999999999999998885432


Q ss_pred             CCC----------------------------------------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          141 KGE----------------------------------------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       141 ~~~----------------------------------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ..+                                        .....+..+.+++..|++.+|.+||++.++++
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  280 (284)
T cd07836         206 NEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ  280 (284)
T ss_pred             cHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            110                                        00122456789999999999999999999875

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.96  E-value=1e-28  Score=189.99  Aligned_cols=170  Identities=24%  Similarity=0.280  Sum_probs=134.4

Q ss_pred             ccc-cCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            7 NKL-TGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         7 ~~l-~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      .++ +||||+++.+.   +...++++||+++++|.+++ .+..           |++.||.|||+   .+++|+|++|.|
T Consensus        59 ~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~---~~~~H~dl~p~n  135 (288)
T cd05583          59 EAVRRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQ---LGIIYRDIKLEN  135 (288)
T ss_pred             HhccCCcchhhhheeeecCCEEEEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHH
Confidence            445 59999999887   77888999999999999998 2222           89999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC--------CCCccchHHHHHHHHHHHhCCccccccCC-
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE--------LTEKSDVDSFEIVILEIITGILTVDLSFK-  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe--------~~~~~di~s~G~~l~~~~~g~~p~~~~~~-  141 (188)
                      |+++.++.++++|||++...... .........++..|++||        .+.++|+||||+++|++++|..||..... 
T Consensus       136 il~~~~~~~~l~dfg~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~  214 (288)
T cd05583         136 ILLDSEGHVVLTDFGLSKEFLAE-EEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ  214 (288)
T ss_pred             eEECCCCCEEEEECccccccccc-cccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc
Confidence            99999999999999988754322 111222345777888888        35689999999999999999999853211 


Q ss_pred             --------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhc
Q 039565          142 --------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQG  180 (188)
Q Consensus       142 --------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~  180 (188)
                                    ...+......+.+++..||+.+|++|||+.++.+.|+-.
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~  267 (288)
T cd05583         215 NSQSEISRRILKSKPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP  267 (288)
T ss_pred             chHHHHHHHHHccCCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence                          111222346788999999999999999998887777544

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.96  E-value=5.2e-29  Score=195.85  Aligned_cols=172  Identities=19%  Similarity=0.237  Sum_probs=131.9

Q ss_pred             cccccCCCeeeeccc--------CCccEEEEecCCCCChhhhcCCc--c---------cHHHHHHHHhcCCCCCcEEeCC
Q 039565            6 RNKLTGPLLVELIGK--------QKNNALELGFRGNPELVDQQGKE--E---------VCCPGLEYLHQGLKHPIIQRDM   66 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--------~~~~~lv~e~~~~~~L~~~~~~~--~---------~i~~~l~~Lh~~~~~~i~h~dl   66 (188)
                      +.+++||||++++++        ....++++||+++ +|...+...  .         |++.||.|||+   .+++|+|+
T Consensus        57 l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~---~~ivH~dl  132 (336)
T cd07849          57 LRRFKHENIIGILDIIRPPSFESFNDVYIVQELMET-DLYKLIKTQHLSNDHIQYFLYQILRGLKYIHS---ANVLHRDL  132 (336)
T ss_pred             HHhCCCCCcCchhheeecccccccceEEEEehhccc-CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCC
Confidence            467889999999987        2347899999984 888777322  2         89999999999   99999999


Q ss_pred             CCCcEEEccCCceEEecccCcccccCCCC-CcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccc
Q 039565           67 KSTNILLNEKVQAKLADFGQSRISPVEGG-THMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        67 ~~~nill~~~~~~kl~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      ||+||+++.++.++++|||++........ ........++..|+|||       ++.++|+||+|+++|+|++|..||..
T Consensus       133 kp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~  212 (336)
T cd07849         133 KPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPG  212 (336)
T ss_pred             CHHHEEECCCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            99999999999999999998875432111 11122346778899998       35679999999999999999988843


Q ss_pred             cCC----------------CC---------------------cC-----HHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          139 SFK----------------GE---------------------FD-----IISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       139 ~~~----------------~~---------------------~~-----~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                      ...                ..                     .+     ...+..+.+++.+||+.+|++|||+.++++.
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h  292 (336)
T cd07849         213 KDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH  292 (336)
T ss_pred             CCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            210                00                     00     0123568899999999999999999999985


Q ss_pred             --Hhhcc
Q 039565          177 --REQGS  181 (188)
Q Consensus       177 --l~~~~  181 (188)
                        ++...
T Consensus       293 p~~~~~~  299 (336)
T cd07849         293 PYLEQYH  299 (336)
T ss_pred             ccccccC
Confidence              55443

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=1.8e-28  Score=184.70  Aligned_cols=165  Identities=25%  Similarity=0.296  Sum_probs=134.6

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +++++|||++++.++   .+..++++||+++++|.+++....            |++.|+.|||+   .+++|+|++|+|
T Consensus        53 l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~n  129 (254)
T cd06627          53 LKNLKHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHE---QGVIHRDIKAAN  129 (254)
T ss_pred             HHhCCCCCccEEEEEEEeCCEEEEEEecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHH
Confidence            567899999999988   778899999999999999983222            99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC---
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK---  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~---  141 (188)
                      |+++.++.++++|||.+.......  .......++..|++||      .+.++|+||+|+++|++++|..||.....   
T Consensus       130 i~i~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~  207 (254)
T cd06627         130 ILTTKDGVVKLADFGVATKLNDVS--KDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAA  207 (254)
T ss_pred             EEECCCCCEEEeccccceecCCCc--ccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHH
Confidence            999999999999999887543211  1123345677889998      46789999999999999999998854221   


Q ss_pred             ---------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 ---------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 ---------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                               ...+...+..+.+++.+||..+|++|||+.+++.
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  250 (254)
T cd06627         208 LFRIVQDDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK  250 (254)
T ss_pred             HHHHhccCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence                     1122334578899999999999999999999874

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.96  E-value=1.6e-28  Score=188.20  Aligned_cols=165  Identities=23%  Similarity=0.259  Sum_probs=130.3

Q ss_pred             cccccCCCeeeeccc---C--CccEEEEecCCCCChhhhcCCc--c-----------cHHHHHHHHhcCCCCCcEEeCCC
Q 039565            6 RNKLTGPLLVELIGK---Q--KNNALELGFRGNPELVDQQGKE--E-----------VCCPGLEYLHQGLKHPIIQRDMK   67 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~--~~~~lv~e~~~~~~L~~~~~~~--~-----------~i~~~l~~Lh~~~~~~i~h~dl~   67 (188)
                      +.+++|||+++++++   .  ...++++||+++ +|.+++.+.  .           |++.||+|||+   .+++|+|++
T Consensus        52 l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~---~~~~h~dl~  127 (287)
T cd07840          52 LQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHS---NGILHRDIK  127 (287)
T ss_pred             HHhccCCCeeeheeeEecCCCCcEEEEeccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCc
Confidence            567889999999999   4  689999999984 888888222  1           99999999999   999999999


Q ss_pred             CCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           68 STNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        68 ~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      |.||+++.++.++++|||.+........ .......++..|++||       ++.++|+||||+++|++++|..||....
T Consensus       128 p~nil~~~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~  206 (287)
T cd07840         128 GSNILINNDGVLKLADFGLARPYTKRNS-ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGST  206 (287)
T ss_pred             HHHeEEcCCCCEEEccccceeeccCCCc-ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            9999999999999999998875432211 1122234566789998       3678999999999999999998875322


Q ss_pred             CC----------------C--------------------------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          141 KG----------------E--------------------------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       141 ~~----------------~--------------------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ..                .                          ....++..+.+++.+||+.+|.+||+++++++
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  283 (287)
T cd07840         207 ELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ  283 (287)
T ss_pred             hHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            10                0                          00012567889999999999999999999876

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.96  E-value=2.7e-28  Score=186.95  Aligned_cols=163  Identities=20%  Similarity=0.219  Sum_probs=129.5

Q ss_pred             ccccc-CCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc--c-----------cHHHHHHHHhcCCCCCcEEeCCC
Q 039565            6 RNKLT-GPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE--E-----------VCCPGLEYLHQGLKHPIIQRDMK   67 (188)
Q Consensus         6 l~~l~-Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~--~-----------~i~~~l~~Lh~~~~~~i~h~dl~   67 (188)
                      +.+++ |||+++++++   ++..+++|||+ +++|.+++ .+.  .           |++.||.|||+   .+++|+|++
T Consensus        51 l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~dl~  126 (283)
T cd07830          51 LRKLNEHPNIVKLKEVFRENDELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHK---HGFFHRDLK  126 (283)
T ss_pred             HHhccCCCCchhHHHHhhcCCcEEEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCC
Confidence            44677 9999999999   78899999999 67998888 322  1           99999999999   999999999


Q ss_pred             CCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           68 STNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        68 ~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      |.||+++.++.++++|||.+......   .......++..|++||       .+.++|+||||++++++++|..||....
T Consensus       127 ~~ni~i~~~~~~~l~d~~~~~~~~~~---~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~  203 (283)
T cd07830         127 PENLLVSGPEVVKIADFGLAREIRSR---PPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSS  203 (283)
T ss_pred             hhhEEEcCCCCEEEeecccceeccCC---CCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCC
Confidence            99999999999999999988754211   1122345667788888       3678999999999999999998774321


Q ss_pred             CCC------------------------------------c-----CHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          141 KGE------------------------------------F-----DIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       141 ~~~------------------------------------~-----~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ...                                    .     .......+.+++..||+.+|++|||+++++.
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  279 (283)
T cd07830         204 EIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ  279 (283)
T ss_pred             hHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence            100                                    0     0011367889999999999999999999875

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.95  E-value=2.4e-28  Score=189.99  Aligned_cols=161  Identities=25%  Similarity=0.244  Sum_probs=129.8

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc--CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ--GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~--~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +++++|||++++.++   ....++++||+. |++.+++  ....           |++.|+.|||+   .+++|+|++|.
T Consensus        69 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~  144 (308)
T cd06634          69 LQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAG  144 (308)
T ss_pred             HHhCCCCCcccEEEEEEcCCeeEEEEEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHH
Confidence            567899999999988   778899999997 5777766  2211           88999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC---------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE---------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe---------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      ||+++.++.++++|||++.....      .....++..|++||         .+.++|+||||+++|++++|..||....
T Consensus       145 nil~~~~~~~kl~dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~  218 (308)
T cd06634         145 NILLSEPGLVKLGDFGSASIMAP------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN  218 (308)
T ss_pred             hEEECCCCcEEECCcccceeecC------cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCcccc
Confidence            99999999999999998765321      12345667788887         3557999999999999999998874321


Q ss_pred             C-------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          141 K-------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       141 ~-------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                      .             .......+..+.+++.+||+.+|++||+++++++.
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~  267 (308)
T cd06634         219 AMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  267 (308)
T ss_pred             HHHHHHHHhhcCCCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence            1             11122456678999999999999999999999875

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=2.9e-28  Score=185.32  Aligned_cols=166  Identities=22%  Similarity=0.244  Sum_probs=133.4

Q ss_pred             cccccCCCeeeeccc-----CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK-----QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-----~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +++++||||+++++.     ....++++||+++++|.+++ ....           |++.||.|||+   .+++|+|++|
T Consensus        58 l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~---~~i~H~dl~p  134 (264)
T cd06653          58 LKNLRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHS---NMIVHRDIKG  134 (264)
T ss_pred             HHHcCCCCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCH
Confidence            567899999999988     24578999999999999988 2221           99999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCC-CcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCcccccc--
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGG-THMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLS--  139 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~--  139 (188)
                      +||+++.++.++++|||++........ ........++..|++||      .+.++|+||||+++|++++|..||...  
T Consensus       135 ~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~  214 (264)
T cd06653         135 ANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEA  214 (264)
T ss_pred             HHEEEcCCCCEEECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCH
Confidence            999999999999999999875421111 11122345778899999      467899999999999999999998532  


Q ss_pred             -----------CCCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          140 -----------FKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       140 -----------~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                 .....+......+.+++.+|++ +|..||++.+++.
T Consensus       215 ~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~  260 (264)
T cd06653         215 MAAIFKIATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR  260 (264)
T ss_pred             HHHHHHHHcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence                       1233455667789999999999 5799999998875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.95  E-value=3.9e-28  Score=186.15  Aligned_cols=163  Identities=21%  Similarity=0.284  Sum_probs=127.9

Q ss_pred             cccccCCCeeeeccc---CCc-----cEEEEecCCCCChhhhcCC--c---c---------cHHHHHHHHhcCCCCCcEE
Q 039565            6 RNKLTGPLLVELIGK---QKN-----NALELGFRGNPELVDQQGK--E---E---------VCCPGLEYLHQGLKHPIIQ   63 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~-----~~lv~e~~~~~~L~~~~~~--~---~---------~i~~~l~~Lh~~~~~~i~h   63 (188)
                      +.+++|||++++++.   .+.     .++++||+.+ +|.+++.+  .   .         |++.||.|||+   .+++|
T Consensus        55 l~~~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~---~~i~h  130 (287)
T cd07838          55 LESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHS---HRIVH  130 (287)
T ss_pred             hhccCCCCcceEEEEEeeccCCCCceeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeee
Confidence            455679999999999   344     8999999984 88888721  1   1         99999999999   99999


Q ss_pred             eCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCcccc
Q 039565           64 RDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVD  137 (188)
Q Consensus        64 ~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~  137 (188)
                      +|++|+||+++.++.++++|||.+.......   ......++..|++||      ++.++|+||||+++|+|++|..||+
T Consensus       131 ~~l~~~nili~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~  207 (287)
T cd07838         131 RDLKPQNILVTSDGQVKIADFGLARIYSFEM---ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFR  207 (287)
T ss_pred             ccCChhhEEEccCCCEEEeccCcceeccCCc---ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCccc
Confidence            9999999999999999999999887543211   112234567788888      5778999999999999999998875


Q ss_pred             ccCCCC--------------------------------------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          138 LSFKGE--------------------------------------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       138 ~~~~~~--------------------------------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      .....+                                      ........+.+++.+||+.+|.+||+++++++
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~  283 (287)
T cd07838         208 GTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ  283 (287)
T ss_pred             CCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence            432100                                      01123467789999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.95  E-value=1.1e-28  Score=204.71  Aligned_cols=163  Identities=23%  Similarity=0.277  Sum_probs=141.2

Q ss_pred             cccCCCeeeeccc--------CCccEEEEecCCCCChhhhcCCc-c-------------cHHHHHHHHhcCCCCCcEEeC
Q 039565            8 KLTGPLLVELIGK--------QKNNALELGFRGNPELVDQQGKE-E-------------VCCPGLEYLHQGLKHPIIQRD   65 (188)
Q Consensus         8 ~l~Hpniv~~~~~--------~~~~~lv~e~~~~~~L~~~~~~~-~-------------~i~~~l~~Lh~~~~~~i~h~d   65 (188)
                      ..+|||++.++|+        ++.+|||||||.+||..+.+++. +             .++.|+.+||.   ..++|||
T Consensus        72 ~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~---nkviHRD  148 (953)
T KOG0587|consen   72 YSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHN---NKVIHRD  148 (953)
T ss_pred             ccCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhh---cceeeec
Confidence            4579999999999        89999999999999999999222 2             88999999999   9999999


Q ss_pred             CCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-----------CCCccchHHHHHHHHHHHhCCc
Q 039565           66 MKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-----------LTEKSDVDSFEIVILEIITGIL  134 (188)
Q Consensus        66 l~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-----------~~~~~di~s~G~~l~~~~~g~~  134 (188)
                      +|-.|||++.++.+|+.|||++....  .+.....+..||++|||||           ++.++|+||+|++-.||..|.+
T Consensus       149 ikG~NiLLT~e~~VKLvDFGvSaQld--sT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~P  226 (953)
T KOG0587|consen  149 IKGQNVLLTENAEVKLVDFGVSAQLD--STVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAP  226 (953)
T ss_pred             ccCceEEEeccCcEEEeeeeeeeeee--cccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCC
Confidence            99999999999999999999987543  3444567789999999999           6889999999999999999998


Q ss_pred             ccc--------------ccCCCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          135 TVD--------------LSFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       135 p~~--------------~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      |+-              +....-.+....+++-+++..|+.+|-++||++.++++
T Consensus       227 Pl~DmHPmraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~  281 (953)
T KOG0587|consen  227 PLCDMHPMRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK  281 (953)
T ss_pred             CccCcchhhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence            762              22222346788999999999999999999999988875

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.95  E-value=1.6e-28  Score=190.85  Aligned_cols=164  Identities=22%  Similarity=0.232  Sum_probs=127.7

Q ss_pred             cccccCCCeeeeccc-----CCccEEEEecCCCCChhhhcCCc-c------------cHHHHHHHHhcCCCCCcEEeCCC
Q 039565            6 RNKLTGPLLVELIGK-----QKNNALELGFRGNPELVDQQGKE-E------------VCCPGLEYLHQGLKHPIIQRDMK   67 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~-~------------~i~~~l~~Lh~~~~~~i~h~dl~   67 (188)
                      +.+++||||++++++     .+..++|+||+.+ +|.+++... .            |++.||.|||+   .+++|+||+
T Consensus        60 l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~  135 (309)
T cd07845          60 LLNLRHPNIVELKEVVVGKHLDSIFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHE---NFIIHRDLK  135 (309)
T ss_pred             HHhCCCCCCcceEEEEecCCCCeEEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCC
Confidence            457899999999988     2467999999984 788887221 1            99999999999   999999999


Q ss_pred             CCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           68 STNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        68 ~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      |+||+++.++.++|+|||.+........  ......++..|++||       ++.++|+||+|+++|++++|..||....
T Consensus       136 p~nil~~~~~~~kL~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~  213 (309)
T cd07845         136 VSNLLLTDKGCLKIADFGLARTYGLPAK--PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKS  213 (309)
T ss_pred             HHHEEECCCCCEEECccceeeecCCccC--CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            9999999999999999999875432211  111223456788888       3678999999999999999998874221


Q ss_pred             CCC-----------------------------------cC------HHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          141 KGE-----------------------------------FD------IISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       141 ~~~-----------------------------------~~------~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ..+                                   ..      ...+..+.+++..|++.||++|||++++++
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~  289 (309)
T cd07845         214 EIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE  289 (309)
T ss_pred             HHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            100                                   00      012567789999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.95  E-value=2.8e-28  Score=183.76  Aligned_cols=165  Identities=22%  Similarity=0.340  Sum_probs=135.5

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc---c------------cHHHHHHHHhcCCCCCcEEeCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE---E------------VCCPGLEYLHQGLKHPIIQRDM   66 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~---~------------~i~~~l~~Lh~~~~~~i~h~dl   66 (188)
                      +.+++|||++++.+.   ....++++||+++++|.+++ ...   .            +++.||.|||+   .+++|+|+
T Consensus        53 l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~---~~~~H~dl  129 (258)
T cd08215          53 LKKLNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHS---RKILHRDI  129 (258)
T ss_pred             HHhcCCCChhheEEEEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHh---CCEecccC
Confidence            467789999999988   78889999999999999998 321   1            99999999999   89999999


Q ss_pred             CCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           67 KSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        67 ~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      +|+||+++.++.++++|||.+.......  .......++..|++||      .+.++|+||+|++++++++|..||+...
T Consensus       130 ~~~nil~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~  207 (258)
T cd08215         130 KPQNIFLTSNGLVKLGDFGISKVLSSTV--DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN  207 (258)
T ss_pred             ChHHeEEcCCCcEEECCccceeecccCc--ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc
Confidence            9999999999999999999887543221  1233346777889988      5788999999999999999999986542


Q ss_pred             C------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          141 K------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       141 ~------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      .            ...+......+.+++.+||..+|++|||+.++++
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~  254 (258)
T cd08215         208 LLELALKILKGQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQ  254 (258)
T ss_pred             HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            1            1122244568899999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.95  E-value=3.8e-28  Score=189.29  Aligned_cols=160  Identities=26%  Similarity=0.264  Sum_probs=128.3

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-C-Ccc-----------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-G-KEE-----------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~-~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++|||++++.++   ....++++||+. +++.+++ . ...           |++.|+.|||+   .+++|+|++|+
T Consensus        75 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dl~p~  150 (313)
T cd06633          75 LQQLKHPNTIEYKGCYLKEHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAG  150 (313)
T ss_pred             HHhCCCCCCccEEEEEEeCCEEEEEEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChh
Confidence            567899999999998   778899999997 5777776 2 211           89999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC---------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE---------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe---------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      ||+++.++.++++|||.+....      ......++..|++||         ++.++|+||||+++|++++|..||....
T Consensus       151 nili~~~~~~kL~dfg~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~  224 (313)
T cd06633         151 NILLTEPGQVKLADFGSASKSS------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN  224 (313)
T ss_pred             hEEECCCCCEEEeecCCCcccC------CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            9999999999999999875321      122345677788888         3556899999999999999999875421


Q ss_pred             -------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          141 -------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       141 -------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                   ........+..+.+++.+||+.+|++||++.+++.
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~  272 (313)
T cd06633         225 AMSALYHIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLR  272 (313)
T ss_pred             hHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                         11112234457899999999999999999999886

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.95  E-value=1.6e-28  Score=188.83  Aligned_cols=165  Identities=22%  Similarity=0.240  Sum_probs=126.0

Q ss_pred             ccccc-CCCeeeeccc---CCccEEEEecCCCCChhhhc-----CC-c--c---------cHHHHHHHHhcCCCCCcEEe
Q 039565            6 RNKLT-GPLLVELIGK---QKNNALELGFRGNPELVDQQ-----GK-E--E---------VCCPGLEYLHQGLKHPIIQR   64 (188)
Q Consensus         6 l~~l~-Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-----~~-~--~---------~i~~~l~~Lh~~~~~~i~h~   64 (188)
                      +.++. ||||+++++.   ....++++||+.. ++.++.     .. .  +         +++.||+|||+.  .+++||
T Consensus        56 l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~--~~i~H~  132 (288)
T cd06616          56 VMRSSDCPYIVKFYGALFREGDCWICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEE--LKIIHR  132 (288)
T ss_pred             HHHhcCCCCEeeeeeEEecCCcEEEEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecc
Confidence            44564 9999999998   7788999999874 554432     11 1  1         899999999971  499999


Q ss_pred             CCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC---------CCCccchHHHHHHHHHHHhCCcc
Q 039565           65 DMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE---------LTEKSDVDSFEIVILEIITGILT  135 (188)
Q Consensus        65 dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe---------~~~~~di~s~G~~l~~~~~g~~p  135 (188)
                      |++|+||+++.++.++++|||++......   .......++..|++||         ++.++|+||||+++|++++|..|
T Consensus       133 dlkp~Nil~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p  209 (288)
T cd06616         133 DVKPSNILLDRNGNIKLCDFGISGQLVDS---IAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFP  209 (288)
T ss_pred             CCCHHHEEEccCCcEEEeecchhHHhccC---CccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCC
Confidence            99999999999999999999988643211   1112235667788887         35689999999999999999999


Q ss_pred             ccccC-----------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          136 VDLSF-----------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       136 ~~~~~-----------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                      |....                 ........+..+.+++..||+.+|++|||+++|++.
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~  267 (288)
T cd06616         210 YPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH  267 (288)
T ss_pred             chhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            85321                 001112356789999999999999999999999873

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.95  E-value=2.5e-28  Score=188.84  Aligned_cols=165  Identities=22%  Similarity=0.201  Sum_probs=127.1

Q ss_pred             cccccCCCeeeeccc---CC----------ccEEEEecCCCCChhhhc-CCc---c---------cHHHHHHHHhcCCCC
Q 039565            6 RNKLTGPLLVELIGK---QK----------NNALELGFRGNPELVDQQ-GKE---E---------VCCPGLEYLHQGLKH   59 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~----------~~~lv~e~~~~~~L~~~~-~~~---~---------~i~~~l~~Lh~~~~~   59 (188)
                      +++++||||++++++   ..          ..++++||+++ ++...+ ...   .         |++.||.|||+   .
T Consensus        60 ~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~  135 (302)
T cd07864          60 LRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHK---K  135 (302)
T ss_pred             HHhCCCCCeeeeeheecCcchhhhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---C
Confidence            467899999999987   22          68999999986 676666 222   1         99999999999   9


Q ss_pred             CcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhC
Q 039565           60 PIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITG  132 (188)
Q Consensus        60 ~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g  132 (188)
                      +++|+|++|.||+++.++.++++|||.+........ .......++..|++||       .+.++|+||||++++++++|
T Consensus       136 ~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g  214 (302)
T cd07864         136 NFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEES-RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTK  214 (302)
T ss_pred             CeecCCCCHHHEEECCCCcEEeCcccccccccCCcc-cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhC
Confidence            999999999999999999999999998875432211 1111223456688887       36779999999999999999


Q ss_pred             CccccccCCC----------------C-------------------------cCHHHHHHHHHHHHHccCcCCCCCCCHH
Q 039565          133 ILTVDLSFKG----------------E-------------------------FDIISVEKAVEIAMASVSSKVNRRPLMN  171 (188)
Q Consensus       133 ~~p~~~~~~~----------------~-------------------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~  171 (188)
                      +.||......                .                         .....+..+.+++..||+.+|.+||+++
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~  294 (302)
T cd07864         215 KPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAE  294 (302)
T ss_pred             CCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHH
Confidence            9888532100                0                         0011356889999999999999999999


Q ss_pred             HHHH
Q 039565          172 QVVM  175 (188)
Q Consensus       172 ~i~~  175 (188)
                      ++++
T Consensus       295 ~il~  298 (302)
T cd07864         295 EALN  298 (302)
T ss_pred             HHhc
Confidence            9875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.95  E-value=1.8e-28  Score=189.06  Aligned_cols=163  Identities=16%  Similarity=0.137  Sum_probs=124.7

Q ss_pred             ccc-cCCCeeeeccc---CCc-----cEEEEecCCCCChhhhc-CC--c-----c---------cHHHHHHHHhcCCCCC
Q 039565            7 NKL-TGPLLVELIGK---QKN-----NALELGFRGNPELVDQQ-GK--E-----E---------VCCPGLEYLHQGLKHP   60 (188)
Q Consensus         7 ~~l-~Hpniv~~~~~---~~~-----~~lv~e~~~~~~L~~~~-~~--~-----~---------~i~~~l~~Lh~~~~~~   60 (188)
                      .++ +||||++++++   .+.     .++++||+++ +|.+++ ..  .     .         |++.||.|||+   .+
T Consensus        55 ~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~---~~  130 (295)
T cd07837          55 QMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHK---HG  130 (295)
T ss_pred             HHccCCCCccceeeeEeecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHH---CC
Confidence            445 46999999988   333     7999999995 788877 21  1     1         99999999999   99


Q ss_pred             cEEeCCCCCcEEEcc-CCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhC
Q 039565           61 IIQRDMKSTNILLNE-KVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITG  132 (188)
Q Consensus        61 i~h~dl~~~nill~~-~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g  132 (188)
                      ++|+|++|+||+++. ++.++++|||.+........  ......+++.|++||       ++.++|+||||+++|++++|
T Consensus       131 i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g  208 (295)
T cd07837         131 VMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVK--SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRK  208 (295)
T ss_pred             eeecCCChHHEEEecCCCeEEEeecccceecCCCcc--ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcC
Confidence            999999999999998 88999999998875422111  112224566788888       36789999999999999999


Q ss_pred             CccccccCCC----------------C-----------------------cCHHHHHHHHHHHHHccCcCCCCCCCHHHH
Q 039565          133 ILTVDLSFKG----------------E-----------------------FDIISVEKAVEIAMASVSSKVNRRPLMNQV  173 (188)
Q Consensus       133 ~~p~~~~~~~----------------~-----------------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i  173 (188)
                      ..||......                .                       .....+.++.+++..||+.+|.+||+++++
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~ei  288 (295)
T cd07837         209 QPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAA  288 (295)
T ss_pred             CCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHH
Confidence            9887432100                0                       001235678899999999999999999998


Q ss_pred             HH
Q 039565          174 VM  175 (188)
Q Consensus       174 ~~  175 (188)
                      +.
T Consensus       289 l~  290 (295)
T cd07837         289 LT  290 (295)
T ss_pred             hc
Confidence            75

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.95  E-value=3.5e-28  Score=187.20  Aligned_cols=166  Identities=22%  Similarity=0.270  Sum_probs=130.6

Q ss_pred             cccc-cCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKL-TGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l-~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.++ +||||+++++.   +...++++||+++++|.+++ ....           |++.||.|||+   .+++|+|++|+
T Consensus        58 l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~  134 (290)
T cd05613          58 LEHIRQSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHK---LGIIYRDIKLE  134 (290)
T ss_pred             HHhcccCCChhceeeEeecCCeEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHH
Confidence            3445 59999999877   66778999999999999998 2222           89999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC--------CCCccchHHHHHHHHHHHhCCccccccCC
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE--------LTEKSDVDSFEIVILEIITGILTVDLSFK  141 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe--------~~~~~di~s~G~~l~~~~~g~~p~~~~~~  141 (188)
                      ||+++.++.++++|||++..... ..........|+..|++||        .+.++|+||||+++|++++|..||+....
T Consensus       135 nil~~~~~~~kl~dfg~~~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~  213 (290)
T cd05613         135 NILLDSNGHVVLTDFGLSKEFHE-DEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGE  213 (290)
T ss_pred             HeEECCCCCEEEeeCccceeccc-ccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCc
Confidence            99999999999999998875421 1111222355777899998        24679999999999999999999853211


Q ss_pred             ---------------CCcCHHHHHHHHHHHHHccCcCCCCCC-----CHHHHHH
Q 039565          142 ---------------GEFDIISVEKAVEIAMASVSSKVNRRP-----LMNQVVM  175 (188)
Q Consensus       142 ---------------~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~i~~  175 (188)
                                     ...+......+.+++..||+.+|++||     ++++++.
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~  267 (290)
T cd05613         214 KNSQAEISRRILKSEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK  267 (290)
T ss_pred             cccHHHHHHHhhccCCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence                           112223456788999999999999997     6777765

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.95  E-value=1.9e-28  Score=187.20  Aligned_cols=167  Identities=24%  Similarity=0.316  Sum_probs=134.6

Q ss_pred             ccccc-CCCeeeeccc---CCccEEEEecCCCCChhhhcCCc-c-----------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLT-GPLLVELIGK---QKNNALELGFRGNPELVDQQGKE-E-----------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~-Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~-~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++ ||||++++++   .+..+++||++.+++|.+++.+. .           |++.||.|||+   .+++|+|++|+
T Consensus        55 ~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~---~~~~H~dl~~~  131 (280)
T cd05581          55 LTRLNGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHS---KGIIHRDLKPE  131 (280)
T ss_pred             HHhcccCCCchhHHHHhcCCceEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHH
Confidence            34666 9999999988   77899999999999999999333 2           99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCC------------------CcceeeecccccccCCC------CCCccchHHHHHH
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGG------------------THMSTTIAGTAGFLNTE------LTEKSDVDSFEIV  125 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~  125 (188)
                      ||+++.++.++++|||.+........                  ........++..|++||      .+.++|+||||++
T Consensus       132 ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~  211 (280)
T cd05581         132 NILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCI  211 (280)
T ss_pred             HeEECCCCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHH
Confidence            99999999999999998875432111                  01222345677888888      5778999999999


Q ss_pred             HHHHHhCCccccccCC-----------CCcCHHHHHHHHHHHHHccCcCCCCCCCH----HHHHH
Q 039565          126 ILEIITGILTVDLSFK-----------GEFDIISVEKAVEIAMASVSSKVNRRPLM----NQVVM  175 (188)
Q Consensus       126 l~~~~~g~~p~~~~~~-----------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~----~~i~~  175 (188)
                      ++++++|..||.....           ...+...+..+.+++..||+.+|.+||++    +++++
T Consensus       212 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~  276 (280)
T cd05581         212 IYQMLTGKPPFRGSNEYLTFQKILKLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA  276 (280)
T ss_pred             HHHHHhCCCCCCCccHHHHHHHHHhcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence            9999999999864321           12333446788999999999999999999    77764

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.95  E-value=2.3e-29  Score=207.84  Aligned_cols=175  Identities=19%  Similarity=0.240  Sum_probs=143.2

Q ss_pred             CcccccCCCeeeeccc--CCccEEEEecCCCCChhhhcCCc--c-----------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            5 NRNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQGKE--E-----------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~~~~--~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      .|.+++|||+++++++  .....||++|++.|+|.++++.+  .           |||+||.|||+   .+++||||..+
T Consensus       751 ~masldHpnl~RLLgvc~~s~~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~---qrlVHrdLaaR  827 (1177)
T KOG1025|consen  751 RMASLDHPNLLRLLGVCMLSTLQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEE---QRLVHRDLAAR  827 (1177)
T ss_pred             HHhcCCCchHHHHhhhcccchHHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHh---cchhhhhhhhh
Confidence            3788999999999999  67799999999999999999322  2           99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCC-
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFK-  141 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~-  141 (188)
                      |+|+.....+|+.|||+++...............-..-|++-|      ++.++|||||||++||++| |..|++.... 
T Consensus       828 NVLVksP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~  907 (1177)
T KOG1025|consen  828 NVLVKSPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAE  907 (1177)
T ss_pred             heeecCCCeEEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHH
Confidence            9999999999999999999765333332222223334566655      7999999999999999997 6677754322 


Q ss_pred             -----------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          142 -----------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       142 -----------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                                 -..+..+...+..++..||..|+..||+++++...+.....
T Consensus       908 eI~dlle~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ar  959 (1177)
T KOG1025|consen  908 EIPDLLEKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMAR  959 (1177)
T ss_pred             HhhHHHhccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhc
Confidence                       23455677789999999999999999999999998876554

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.95  E-value=4.9e-28  Score=190.13  Aligned_cols=166  Identities=18%  Similarity=0.171  Sum_probs=129.8

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-cc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-EE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++   .+..++++||++ ++|.+++.. ..           |++.||.|||+   .+++|+|++|+|
T Consensus        74 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~---~~i~H~dl~~~n  149 (335)
T PTZ00024         74 MNEIKHENIMGLVDVYVEGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHK---WYFMHRDLSPAN  149 (335)
T ss_pred             HHhCCCcceeeeeEEEecCCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHH
Confidence            567899999999998   788899999998 689988822 21           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCC------------CCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHh
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEG------------GTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIIT  131 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~------------~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~  131 (188)
                      |+++.++.++++|||.+.......            .........++..|++||       ++.++|+||||+++|++++
T Consensus       150 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~t  229 (335)
T PTZ00024        150 IFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLT  229 (335)
T ss_pred             eEECCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHh
Confidence            999999999999999886532100            001111234566789998       3678999999999999999


Q ss_pred             CCccccccCCCC----------------c-----------------------CHHHHHHHHHHHHHccCcCCCCCCCHHH
Q 039565          132 GILTVDLSFKGE----------------F-----------------------DIISVEKAVEIAMASVSSKVNRRPLMNQ  172 (188)
Q Consensus       132 g~~p~~~~~~~~----------------~-----------------------~~~~~~~~~~l~~~cl~~~p~~Rps~~~  172 (188)
                      |..||......+                +                       ....+..+.+++..|++.+|++|||+++
T Consensus       230 g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~  309 (335)
T PTZ00024        230 GKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKE  309 (335)
T ss_pred             CCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHH
Confidence            998874321000                0                       0112467889999999999999999999


Q ss_pred             HHH
Q 039565          173 VVM  175 (188)
Q Consensus       173 i~~  175 (188)
                      ++.
T Consensus       310 ~l~  312 (335)
T PTZ00024        310 ALK  312 (335)
T ss_pred             Hhc
Confidence            986

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.95  E-value=6.1e-28  Score=181.66  Aligned_cols=162  Identities=27%  Similarity=0.345  Sum_probs=132.1

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc---c---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE---E---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~---~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||+++++.   +...+++|||+++++|.+++.+.   .         |++.|+.|||+   .+++|+|++|.|
T Consensus        47 l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~---~~~~H~~l~p~n  123 (250)
T cd05123          47 LSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHS---LGIIYRDLKPEN  123 (250)
T ss_pred             HHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcce
Confidence            567889999999888   77889999999999999999322   2         89999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC---
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK---  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~---  141 (188)
                      |+++.++.++++|||.+.......  .......++..|++||      .+.++|+||||+++|++++|..||+....   
T Consensus       124 i~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~  201 (250)
T cd05123         124 ILLDADGHIKLTDFGLAKELSSEG--SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEI  201 (250)
T ss_pred             EEEcCCCcEEEeecCcceecccCC--CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHH
Confidence            999999999999999887542111  1233445677788888      46789999999999999999999854331   


Q ss_pred             --------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHH
Q 039565          142 --------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQ  172 (188)
Q Consensus       142 --------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~  172 (188)
                              ...+...+..+.+++..||..+|++||++.+
T Consensus       202 ~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~  240 (250)
T cd05123         202 YEKILKDPLRFPEFLSPEARDLISGLLQKDPTKRLGSGG  240 (250)
T ss_pred             HHHHhcCCCCCCCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence                    1233344678899999999999999999943

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.95  E-value=8.5e-28  Score=195.93  Aligned_cols=169  Identities=22%  Similarity=0.242  Sum_probs=131.5

Q ss_pred             cccccCCCeeeeccc---------CCccEEEEecCCCCChhhhcCCcc---------------cHHHHHHHHhcCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---------QKNNALELGFRGNPELVDQQGKEE---------------VCCPGLEYLHQGLKHPI   61 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---------~~~~~lv~e~~~~~~L~~~~~~~~---------------~i~~~l~~Lh~~~~~~i   61 (188)
                      |++++|||||+++++         ...-.++||||.+|+|...+++..               +++.||.|||+   .+|
T Consensus        65 lkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrE---n~I  141 (732)
T KOG4250|consen   65 LKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRE---NGI  141 (732)
T ss_pred             HHHcCchhhhhhcccCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHH---cCc
Confidence            678999999999999         234579999999999999994433               89999999999   999


Q ss_pred             EEeCCCCCcEEEcc--CC--ceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHH
Q 039565           62 IQRDMKSTNILLNE--KV--QAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEII  130 (188)
Q Consensus        62 ~h~dl~~~nill~~--~~--~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~  130 (188)
                      +||||||.||++-.  +|  ..||+|||.++-..   .........||+.|.+|+       ++..+|.|||||++|+..
T Consensus       142 vHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~---d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~ca  218 (732)
T KOG4250|consen  142 VHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELD---DNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECA  218 (732)
T ss_pred             eeccCCCCcEEEeecCCCceEEeeecccccccCC---CCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHh
Confidence            99999999999843  34  46999999998643   223567789999999998       688899999999999999


Q ss_pred             hCCccccccCCCC----------------------------------------cCHHHHHHHHHHHHHccCcCCCCCC--
Q 039565          131 TGILTVDLSFKGE----------------------------------------FDIISVEKAVEIAMASVSSKVNRRP--  168 (188)
Q Consensus       131 ~g~~p~~~~~~~~----------------------------------------~~~~~~~~~~~l~~~cl~~~p~~Rp--  168 (188)
                      ||..||-+....-                                        ........+...+...+.-+|.+|-  
T Consensus       219 TG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~  298 (732)
T KOG4250|consen  219 TGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHE  298 (732)
T ss_pred             ccCCCCCcCCCccccchhhhhhhccCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCC
Confidence            9999884322110                                        1122333566777777888888887  


Q ss_pred             CHHHHHHHHhhc
Q 039565          169 LMNQVVMVREQG  180 (188)
Q Consensus       169 s~~~i~~~l~~~  180 (188)
                      .+.+....+..+
T Consensus       299 ~~~~~Fa~~~dI  310 (732)
T KOG4250|consen  299 GFDRFFAEVDDI  310 (732)
T ss_pred             CcchHHHHHHHH
Confidence            565555555443

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.95  E-value=9e-28  Score=188.41  Aligned_cols=162  Identities=19%  Similarity=0.221  Sum_probs=128.1

Q ss_pred             cccccCCCeeeeccc----CCccEEEEecCCCCChhhhcCCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK----QKNNALELGFRGNPELVDQQGKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~----~~~~~lv~e~~~~~~L~~~~~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||+++.++    ....++++||+. ++|..++....           |++.||.|||+   .+++|+|++|.|
T Consensus        63 l~~l~hpniv~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~---~~iiH~dl~p~N  138 (328)
T cd07856          63 LKHLRHENIISLSDIFISPLEDIYFVTELLG-TDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHS---AGVVHRDLKPSN  138 (328)
T ss_pred             HHhcCCCCeeeEeeeEecCCCcEEEEeehhc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHH
Confidence            457899999999987    456889999985 58988883222           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCC--
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFK--  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~--  141 (188)
                      |+++.++.++++|||.+.....     ......++..|++||       ++.++|+||||+++|++++|..||.....  
T Consensus       139 ili~~~~~~~l~dfg~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~  213 (328)
T cd07856         139 ILINENCDLKICDFGLARIQDP-----QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVN  213 (328)
T ss_pred             EeECCCCCEEeCccccccccCC-----CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            9999999999999998764321     112234566788887       46789999999999999999988853211  


Q ss_pred             -----------------------------------CCcC-----HHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          142 -----------------------------------GEFD-----IISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       142 -----------------------------------~~~~-----~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                                                         ...+     ......+.+++..|++.+|++|||+++++..
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~  288 (328)
T cd07856         214 QFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH  288 (328)
T ss_pred             HHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence                                               0000     0124678899999999999999999999874

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.95  E-value=1.5e-27  Score=184.91  Aligned_cols=166  Identities=20%  Similarity=0.219  Sum_probs=126.2

Q ss_pred             cccccCCCeeeeccc---C--------CccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---Q--------KNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPI   61 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~--------~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i   61 (188)
                      +++++||||++++++   .        ...++++||+.+ +|...+ ....            |++.||.|||+   .++
T Consensus        61 l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~---~~i  136 (311)
T cd07866          61 LKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHE---NHI  136 (311)
T ss_pred             HHhcCCCCccchhhheecccccccccCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHh---CCe
Confidence            567899999999887   2        236899999985 677666 2221            99999999999   999


Q ss_pred             EEeCCCCCcEEEccCCceEEecccCcccccCCCCCc---------ceeeecccccccCCC-------CCCccchHHHHHH
Q 039565           62 IQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTH---------MSTTIAGTAGFLNTE-------LTEKSDVDSFEIV  125 (188)
Q Consensus        62 ~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~---------~~~~~~~~~~~~~pe-------~~~~~di~s~G~~  125 (188)
                      +|+|++|+||+++.++.++++|||++..........         ......++..|++||       ++.++|+||||++
T Consensus       137 ~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~i  216 (311)
T cd07866         137 LHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCV  216 (311)
T ss_pred             ecCCCCHHHEEECCCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHH
Confidence            999999999999999999999999887543211110         112234567799998       3678999999999


Q ss_pred             HHHHHhCCccccccCCCC----------------------------------cC-------HHHHHHHHHHHHHccCcCC
Q 039565          126 ILEIITGILTVDLSFKGE----------------------------------FD-------IISVEKAVEIAMASVSSKV  164 (188)
Q Consensus       126 l~~~~~g~~p~~~~~~~~----------------------------------~~-------~~~~~~~~~l~~~cl~~~p  164 (188)
                      +|++++|..||.......                                  .+       ......+.+++.+|++.+|
T Consensus       217 l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p  296 (311)
T cd07866         217 FAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDP  296 (311)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCc
Confidence            999999998875321100                                  00       0122567899999999999


Q ss_pred             CCCCCHHHHHH
Q 039565          165 NRRPLMNQVVM  175 (188)
Q Consensus       165 ~~Rps~~~i~~  175 (188)
                      .+|||+.+++.
T Consensus       297 ~~R~t~~ell~  307 (311)
T cd07866         297 YKRLTASDALE  307 (311)
T ss_pred             ccCcCHHHHhc
Confidence            99999999875

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.95  E-value=1.2e-28  Score=182.18  Aligned_cols=160  Identities=24%  Similarity=0.319  Sum_probs=124.5

Q ss_pred             cCCCeeeeccc---CCccEEEEecCCCCChhhhc----CCcc---------cHHHHHHHHhcCCCCCcEEeCCCCCcEEE
Q 039565           10 TGPLLVELIGK---QKNNALELGFRGNPELVDQQ----GKEE---------VCCPGLEYLHQGLKHPIIQRDMKSTNILL   73 (188)
Q Consensus        10 ~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~----~~~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~nill   73 (188)
                      +.|.||+.+|+   +...++.||.|.. =+...+    +.-+         .+..||.||-+  +++|+|||+||+|||+
T Consensus       149 dcpyIV~c~GyFi~n~dV~IcMelMs~-C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKe--KH~viHRDvKPSNILl  225 (391)
T KOG0983|consen  149 DCPYIVQCFGYFITNTDVFICMELMST-CAEKLLKRIKGPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILL  225 (391)
T ss_pred             CCCeeeeeeeEEeeCchHHHHHHHHHH-HHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHH--hcceeecccCccceEE
Confidence            36999999998   6777788887642 222222    1111         67899999998  4899999999999999


Q ss_pred             ccCCceEEecccCcccccCCCCCcceeeecccccccCCC---------CCCccchHHHHHHHHHHHhCCccccccC----
Q 039565           74 NEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE---------LTEKSDVDSFEIVILEIITGILTVDLSF----  140 (188)
Q Consensus        74 ~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe---------~~~~~di~s~G~~l~~~~~g~~p~~~~~----  140 (188)
                      +..|.+|++|||++..+.   .........|++.||+||         ++.++|+||||+.++|+.||+.||..-.    
T Consensus       226 De~GniKlCDFGIsGrlv---dSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe  302 (391)
T KOG0983|consen  226 DERGNIKLCDFGISGRLV---DSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFE  302 (391)
T ss_pred             ccCCCEEeecccccceee---cccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHH
Confidence            999999999999987653   222344567899999999         6788999999999999999999985311    


Q ss_pred             ---------CCCcC--HHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          141 ---------KGEFD--IISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       141 ---------~~~~~--~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                               +...+  ...+..+.+++..||++|+.+||...++++
T Consensus       303 ~ltkvln~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~  348 (391)
T KOG0983|consen  303 VLTKVLNEEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLE  348 (391)
T ss_pred             HHHHHHhcCCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence                     11111  125778999999999999999999998876

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.95  E-value=1.2e-27  Score=187.90  Aligned_cols=165  Identities=18%  Similarity=0.159  Sum_probs=127.0

Q ss_pred             ccc-cCCCeeeeccc-------CCccEEEEecCCCCChhhhcC-Ccc-----------cHHHHHHHHhcCCCCCcEEeCC
Q 039565            7 NKL-TGPLLVELIGK-------QKNNALELGFRGNPELVDQQG-KEE-----------VCCPGLEYLHQGLKHPIIQRDM   66 (188)
Q Consensus         7 ~~l-~Hpniv~~~~~-------~~~~~lv~e~~~~~~L~~~~~-~~~-----------~i~~~l~~Lh~~~~~~i~h~dl   66 (188)
                      .++ +||||+++++.       ....+++++|+. ++|.+++. ...           |++.||.|||+   .+++|+|+
T Consensus        56 ~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~---~givH~dl  131 (332)
T cd07857          56 RHFRGHKNITCLYDMDIVFPGNFNELYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHS---ANVLHRDL  131 (332)
T ss_pred             HHhcCCCChheeeeeeeeccccCCcEEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCC
Confidence            345 59999999886       245678888887 58988882 222           99999999999   99999999


Q ss_pred             CCCcEEEccCCceEEecccCcccccCCCCC--cceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCcccc
Q 039565           67 KSTNILLNEKVQAKLADFGQSRISPVEGGT--HMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVD  137 (188)
Q Consensus        67 ~~~nill~~~~~~kl~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~  137 (188)
                      ||+||+++.++.++|+|||.+.........  .......|+..|++||       .+.++|+||+|+++|++++|..||.
T Consensus       132 kp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~  211 (332)
T cd07857         132 KPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFK  211 (332)
T ss_pred             CHHHeEEcCCCCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCC
Confidence            999999999999999999998754321111  1122346788899999       3567999999999999999998885


Q ss_pred             ccCCC-------------------------------------CcC-----HHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          138 LSFKG-------------------------------------EFD-----IISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       138 ~~~~~-------------------------------------~~~-----~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      .....                                     ...     ......+.+++..|++.+|++|||++++++
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~  291 (332)
T cd07857         212 GKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE  291 (332)
T ss_pred             CCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            42100                                     000     012357889999999999999999999876

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.95  E-value=8.6e-28  Score=188.23  Aligned_cols=173  Identities=18%  Similarity=0.176  Sum_probs=134.1

Q ss_pred             cccccCCCeeeeccc---C-----CccEEEEecCCCCChhhhcCCc-c-----------cHHHHHHHHhcCCCCCcEEeC
Q 039565            6 RNKLTGPLLVELIGK---Q-----KNNALELGFRGNPELVDQQGKE-E-----------VCCPGLEYLHQGLKHPIIQRD   65 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~-----~~~~lv~e~~~~~~L~~~~~~~-~-----------~i~~~l~~Lh~~~~~~i~h~d   65 (188)
                      +.+++||||+++.++   .     ...++++||+. ++|..++.+. .           |++.||+|||+   .+++|+|
T Consensus        53 l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~---~gi~H~d  128 (330)
T cd07834          53 LRHLRHENIIGLLDILRPPSPEDFNDVYIVTELME-TDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHS---ANVIHRD  128 (330)
T ss_pred             HHhcCCcchhhhhhhhcccCcccccceEEEecchh-hhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCC
Confidence            567889999999998   3     26899999998 5888888332 2           99999999999   9999999


Q ss_pred             CCCCcEEEccCCceEEecccCcccccCCCC-CcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCcccc
Q 039565           66 MKSTNILLNEKVQAKLADFGQSRISPVEGG-THMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVD  137 (188)
Q Consensus        66 l~~~nill~~~~~~kl~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~  137 (188)
                      +||.||+++.++.++++|||.+........ ........++..|++||       .+.++|+||||+++|++++|..||.
T Consensus       129 lkp~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~  208 (330)
T cd07834         129 LKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFP  208 (330)
T ss_pred             CCHHHEEEcCCCCEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcC
Confidence            999999999999999999999875432211 01123345677889998       4668999999999999999998885


Q ss_pred             ccCCCC------------------------------------------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          138 LSFKGE------------------------------------------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       138 ~~~~~~------------------------------------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      .....+                                          .....+..+.+++..||+.+|.+|||++++++
T Consensus       209 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~  288 (330)
T cd07834         209 GRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALA  288 (330)
T ss_pred             CCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence            322100                                          00112456789999999999999999999998


Q ss_pred             H--HhhccC
Q 039565          176 V--REQGSG  182 (188)
Q Consensus       176 ~--l~~~~~  182 (188)
                      .  +++..+
T Consensus       289 ~~~~~~~~~  297 (330)
T cd07834         289 HPYLAQLHD  297 (330)
T ss_pred             CccHHhhcc
Confidence            3  555444

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.95  E-value=1.4e-27  Score=184.55  Aligned_cols=161  Identities=22%  Similarity=0.276  Sum_probs=125.0

Q ss_pred             cCCCeeeeccc---CCccEEEEecCCCCChhhhc-C-C--cc---------cHHHHHHHHhcCCCCCcEEeCCCCCcEEE
Q 039565           10 TGPLLVELIGK---QKNNALELGFRGNPELVDQQ-G-K--EE---------VCCPGLEYLHQGLKHPIIQRDMKSTNILL   73 (188)
Q Consensus        10 ~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~-~--~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~nill   73 (188)
                      .||||+++++.   ....++++||+. +++..++ . .  ..         |++.|+.|||+.  .+++|+|++|+||++
T Consensus        72 ~~~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~--~~i~H~dl~p~nill  148 (296)
T cd06618          72 DCPYIVKCYGYFITDSDVFICMELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNILL  148 (296)
T ss_pred             CCCchHhhheeeecCCeEEEEeeccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhh--CCEecCCCcHHHEEE
Confidence            59999999998   778999999986 4676666 2 1  11         999999999961  589999999999999


Q ss_pred             ccCCceEEecccCcccccCCCCCcceeeecccccccCCC----------CCCccchHHHHHHHHHHHhCCccccccCC--
Q 039565           74 NEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE----------LTEKSDVDSFEIVILEIITGILTVDLSFK--  141 (188)
Q Consensus        74 ~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe----------~~~~~di~s~G~~l~~~~~g~~p~~~~~~--  141 (188)
                      +.++.++|+|||.+.......   ......++..|++||          ++.++|+||||+++|++++|..||.....  
T Consensus       149 ~~~~~~kL~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~  225 (296)
T cd06618         149 DASGNVKLCDFGISGRLVDSK---AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEF  225 (296)
T ss_pred             cCCCCEEECccccchhccCCC---cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHH
Confidence            999999999999886542111   112234566788887          35679999999999999999999854111  


Q ss_pred             -----------CCcC--HHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          142 -----------GEFD--IISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       142 -----------~~~~--~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                                 ...+  ...+..+.+++.+||+.+|.+||+++++++.
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~  273 (296)
T cd06618         226 EVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH  273 (296)
T ss_pred             HHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence                       0111  1245678999999999999999999999874

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.95  E-value=1.8e-27  Score=187.66  Aligned_cols=168  Identities=20%  Similarity=0.237  Sum_probs=129.7

Q ss_pred             cccccCCCeeeeccc---C------CccEEEEecCCCCChhhhcC-Ccc---------cHHHHHHHHhcCCCCCcEEeCC
Q 039565            6 RNKLTGPLLVELIGK---Q------KNNALELGFRGNPELVDQQG-KEE---------VCCPGLEYLHQGLKHPIIQRDM   66 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~------~~~~lv~e~~~~~~L~~~~~-~~~---------~i~~~l~~Lh~~~~~~i~h~dl   66 (188)
                      +.+++||||++++++   .      ...++++||+.. +|..+.. ...         |++.||+|||+   .+++|||+
T Consensus        68 l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dl  143 (342)
T cd07879          68 LKHMQHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQT-DLQKIMGHPLSEDKVQYLVYQMLCGLKYIHS---AGIIHRDL  143 (342)
T ss_pred             HHhcCCCCccchhheecccccCCCCceEEEEeccccc-CHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCC
Confidence            457889999999987   1      345899999974 7777663 222         99999999999   99999999


Q ss_pred             CCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCcccccc
Q 039565           67 KSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLS  139 (188)
Q Consensus        67 ~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~  139 (188)
                      +|+||+++.++.++++|||+++....     ......++..|++||       ++.++|+||||+++|++++|+.||...
T Consensus       144 kp~NIll~~~~~~kL~dfg~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~  218 (342)
T cd07879         144 KPGNLAVNEDCELKILDFGLARHADA-----EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK  218 (342)
T ss_pred             CHHHEEECCCCCEEEeeCCCCcCCCC-----CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence            99999999999999999998874321     112335567788888       356799999999999999999988642


Q ss_pred             CCC----------------------------------CcC--------HHHHHHHHHHHHHccCcCCCCCCCHHHHHHH-
Q 039565          140 FKG----------------------------------EFD--------IISVEKAVEIAMASVSSKVNRRPLMNQVVMV-  176 (188)
Q Consensus       140 ~~~----------------------------------~~~--------~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~-  176 (188)
                      ...                                  ..+        ......+.+++.+||+.+|++||++++++.. 
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~  298 (342)
T cd07879         219 DYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHP  298 (342)
T ss_pred             CHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCc
Confidence            200                                  000        0123467899999999999999999999953 


Q ss_pred             -HhhccC
Q 039565          177 -REQGSG  182 (188)
Q Consensus       177 -l~~~~~  182 (188)
                       +++..+
T Consensus       299 ~f~~~~~  305 (342)
T cd07879         299 YFDSFRD  305 (342)
T ss_pred             chhhccc
Confidence             655543

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.95  E-value=8.2e-28  Score=189.62  Aligned_cols=161  Identities=22%  Similarity=0.259  Sum_probs=127.9

Q ss_pred             cccccCCCeeeeccc---CC------ccEEEEecCCCCChhhhcCCc--c---------cHHHHHHHHhcCCCCCcEEeC
Q 039565            6 RNKLTGPLLVELIGK---QK------NNALELGFRGNPELVDQQGKE--E---------VCCPGLEYLHQGLKHPIIQRD   65 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~------~~~lv~e~~~~~~L~~~~~~~--~---------~i~~~l~~Lh~~~~~~i~h~d   65 (188)
                      +++++|||++++.++   .+      ..++++||+. ++|.+++...  .         |++.||.|||+   .+++|+|
T Consensus        68 l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~---~gi~H~d  143 (343)
T cd07851          68 LKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLMG-ADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHS---AGIIHRD  143 (343)
T ss_pred             HHhccCCCHHHHHHHhhccccccccccEEEEEecCC-CCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCC
Confidence            467899999999887   33      3799999995 6999988332  2         99999999999   9999999


Q ss_pred             CCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccc
Q 039565           66 MKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        66 l~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      ++|+||+++.++.++++|||++......     .....++..|++||       .+.++|+||||+++|++++|..||..
T Consensus       144 lkp~Nill~~~~~~kL~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~  218 (343)
T cd07851         144 LKPSNIAVNEDCELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPG  218 (343)
T ss_pred             CCHHHeEECCCCCEEEcccccccccccc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence            9999999999999999999998754211     22335667788888       35789999999999999999998853


Q ss_pred             cCCCC---------------------------------------c---CHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          139 SFKGE---------------------------------------F---DIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       139 ~~~~~---------------------------------------~---~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      .....                                       +   ....+..+.+++..|++.+|++|||+.+|++
T Consensus       219 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~  297 (343)
T cd07851         219 SDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA  297 (343)
T ss_pred             CChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence            21100                                       0   0012567889999999999999999999976

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.95  E-value=1.1e-27  Score=179.82  Aligned_cols=127  Identities=22%  Similarity=0.266  Sum_probs=107.3

Q ss_pred             cccccCCCeeeeccc----CCccEEEEecCCCCChhhhc--CCcc---------------cHHHHHHHHhcCCCCCcEEe
Q 039565            6 RNKLTGPLLVELIGK----QKNNALELGFRGNPELVDQQ--GKEE---------------VCCPGLEYLHQGLKHPIIQR   64 (188)
Q Consensus         6 l~~l~Hpniv~~~~~----~~~~~lv~e~~~~~~L~~~~--~~~~---------------~i~~~l~~Lh~~~~~~i~h~   64 (188)
                      ++.++||||+.+..+    +...|+++||++. +|..++  ++..               |++.|+.|||+   .=|+||
T Consensus        81 ~REl~h~nvi~Lv~Vfl~~d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~---NWvlHR  156 (438)
T KOG0666|consen   81 LRELKHPNVISLVKVFLSHDKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHS---NWVLHR  156 (438)
T ss_pred             HHHhcCCcchhHHHHHhccCceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhh---hheeec
Confidence            457899999999888    7889999999996 888888  2222               99999999999   899999


Q ss_pred             CCCCCcEEEccC----CceEEecccCcccccCCCCCc-ceeeecccccccCCC-------CCCccchHHHHHHHHHHHhC
Q 039565           65 DMKSTNILLNEK----VQAKLADFGQSRISPVEGGTH-MSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITG  132 (188)
Q Consensus        65 dl~~~nill~~~----~~~kl~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g  132 (188)
                      ||||.||++..+    |++||+|+|+++.+..+-... .......|.+|.|||       ++++.|+|+.||++.|+++-
T Consensus       157 DLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl  236 (438)
T KOG0666|consen  157 DLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTL  236 (438)
T ss_pred             cCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHcc
Confidence            999999999876    899999999999875332222 334567788999999       79999999999999999998


Q ss_pred             Cccc
Q 039565          133 ILTV  136 (188)
Q Consensus       133 ~~p~  136 (188)
                      .+.|
T Consensus       237 ~PlF  240 (438)
T KOG0666|consen  237 EPLF  240 (438)
T ss_pred             Cccc
Confidence            7644

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.95  E-value=2e-27  Score=181.84  Aligned_cols=164  Identities=23%  Similarity=0.234  Sum_probs=129.4

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc--c-----------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE--E-----------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~--~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++|||++++.++   ....++++||++ ++|.+++.+.  .           |++.||.|||+   .+++|+|++|+
T Consensus        52 l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~~l~~~  127 (282)
T cd07829          52 LKELKHPNIVKLLDVIHTERKLYLVFEYCD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHS---HRILHRDLKPQ  127 (282)
T ss_pred             HHhcCCCCHHHHHhhhhcCCceEEEecCcC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChh
Confidence            456789999999998   778999999998 5899999332  2           99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCCC
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFKG  142 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~  142 (188)
                      ||+++.++.++++|||.+........  ......++..|++||       .+.++|+||||+++|++++|..||......
T Consensus       128 ni~~~~~~~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~  205 (282)
T cd07829         128 NILINRDGVLKLADFGLARAFGIPLR--TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEI  205 (282)
T ss_pred             eEEEcCCCCEEEecCCcccccCCCcc--ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHH
Confidence            99999999999999998875432111  112233455688887       467899999999999999999887432100


Q ss_pred             -----------------------------C-----------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          143 -----------------------------E-----------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       143 -----------------------------~-----------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                                   .           ........+.+++..||+.+|++||++++++.
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  278 (282)
T cd07829         206 DQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK  278 (282)
T ss_pred             HHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence                                         0           00012457899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.95  E-value=1.4e-27  Score=193.27  Aligned_cols=114  Identities=22%  Similarity=0.292  Sum_probs=98.8

Q ss_pred             CCeeeeccc---CCccEEEEecCCCCChhhhcCCcc--------------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEc
Q 039565           12 PLLVELIGK---QKNNALELGFRGNPELVDQQGKEE--------------VCCPGLEYLHQGLKHPIIQRDMKSTNILLN   74 (188)
Q Consensus        12 pniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~--------------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~   74 (188)
                      -|+|+++++   .+++|||+|.++ .+|.+++++..              |++.||.+||+   .+||||||||+|||+.
T Consensus       248 ~n~Vrm~d~F~fr~HlciVfELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~---l~IIHcDLKPENILL~  323 (586)
T KOG0667|consen  248 YNIVRMLDYFYFRNHLCIVFELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHE---LGIIHCDLKPENILLK  323 (586)
T ss_pred             eeEEEeeeccccccceeeeehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCChhheeec
Confidence            479999999   999999999998 49999994333              99999999999   9999999999999997


Q ss_pred             cCC--ceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCc
Q 039565           75 EKV--QAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGIL  134 (188)
Q Consensus        75 ~~~--~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~  134 (188)
                      ..+  .+||+|||.++...     ....+..-+.+|.|||      ++.+.|+|||||++.||.+|.+
T Consensus       324 ~~~r~~vKVIDFGSSc~~~-----q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~P  386 (586)
T KOG0667|consen  324 DPKRSRIKVIDFGSSCFES-----QRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEP  386 (586)
T ss_pred             cCCcCceeEEecccccccC-----CcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCcc
Confidence            654  68999999987532     1233667778899999      7999999999999999999986

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=3.7e-28  Score=183.55  Aligned_cols=158  Identities=22%  Similarity=0.281  Sum_probs=133.7

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      |...+||.+..+.-.   ++.+|+||||+-||.|.-++.+..            ++..||.|||+   .+|++||+|.+|
T Consensus       222 L~~~~HPFLt~LKYsFQt~drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs---~~ivYRDlKLEN  298 (516)
T KOG0690|consen  222 LQNCRHPFLTSLKYSFQTQDRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHS---RNIVYRDLKLEN  298 (516)
T ss_pred             HHhccCcHHHHhhhhhccCceEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhh---CCeeeeechhhh
Confidence            456789998877444   899999999999999998884433            99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC---
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK---  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~---  141 (188)
                      .+++.+|++|++|||+++--..  ......+++||+.|+|||      +..++|.|.+|+++|||++|++||-....   
T Consensus       299 LlLDkDGHIKitDFGLCKE~I~--~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kL  376 (516)
T KOG0690|consen  299 LLLDKDGHIKITDFGLCKEEIK--YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKL  376 (516)
T ss_pred             heeccCCceEeeecccchhccc--ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHH
Confidence            9999999999999999985321  223466799999999999      78999999999999999999999954322   


Q ss_pred             --------CCcCHHHHHHHHHHHHHccCcCCCCCC
Q 039565          142 --------GEFDIISVEKAVEIAMASVSSKVNRRP  168 (188)
Q Consensus       142 --------~~~~~~~~~~~~~l~~~cl~~~p~~Rp  168 (188)
                              ..++...+.+...++...+.++|.+|.
T Consensus       377 FeLIl~ed~kFPr~ls~eAktLLsGLL~kdP~kRL  411 (516)
T KOG0690|consen  377 FELILMEDLKFPRTLSPEAKTLLSGLLKKDPKKRL  411 (516)
T ss_pred             HHHHHhhhccCCccCCHHHHHHHHHHhhcChHhhc
Confidence                    125566677888999999999999997

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.94  E-value=1.3e-27  Score=186.80  Aligned_cols=157  Identities=23%  Similarity=0.300  Sum_probs=133.1

Q ss_pred             cccccCCCeeee-ccc--CCccEEEEecCCCCChhhhc-CCc--c-----------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVEL-IGK--QKNNALELGFRGNPELVDQQ-GKE--E-----------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~-~~~--~~~~~lv~e~~~~~~L~~~~-~~~--~-----------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      |++++.|.||.+ |.+  .+.+++|+..|-||+|..++ +..  +           +++-||++||.   .+|++||+||
T Consensus       239 L~kV~s~FiVslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~---~~iVYRDLKP  315 (591)
T KOG0986|consen  239 LEKVSSPFIVSLAYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHR---RRIVYRDLKP  315 (591)
T ss_pred             HHHhccCcEEEEeeeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHh---cceeeccCCh
Confidence            567788999988 555  89999999999999999999 322  2           99999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC--
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF--  140 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~--  140 (188)
                      +|||+|+.|+++|+|+|++.-+.   .........||.+|||||      |+...|.||+||++|+|+.|..||....  
T Consensus       316 eNILLDd~GhvRISDLGLAvei~---~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeK  392 (591)
T KOG0986|consen  316 ENILLDDHGHVRISDLGLAVEIP---EGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEK  392 (591)
T ss_pred             hheeeccCCCeEeeccceEEecC---CCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhh
Confidence            99999999999999999998653   222233458999999999      7889999999999999999999995432  


Q ss_pred             -------------CCCcCHHHHHHHHHHHHHccCcCCCCCC
Q 039565          141 -------------KGEFDIISVEKAVEIAMASVSSKVNRRP  168 (188)
Q Consensus       141 -------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rp  168 (188)
                                   ..+++...++.+.++..+.|..||++|.
T Consensus       393 vk~eEvdrr~~~~~~ey~~kFS~eakslc~~LL~Kdp~~RL  433 (591)
T KOG0986|consen  393 VKREEVDRRTLEDPEEYSDKFSEEAKSLCEGLLTKDPEKRL  433 (591)
T ss_pred             hhHHHHHHHHhcchhhcccccCHHHHHHHHHHHccCHHHhc
Confidence                         2345566677888999999999999986

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.94  E-value=4.1e-27  Score=185.81  Aligned_cols=161  Identities=20%  Similarity=0.233  Sum_probs=125.3

Q ss_pred             cccccCCCeeeeccc---------CCccEEEEecCCCCChhhhcCC--cc---------cHHHHHHHHhcCCCCCcEEeC
Q 039565            6 RNKLTGPLLVELIGK---------QKNNALELGFRGNPELVDQQGK--EE---------VCCPGLEYLHQGLKHPIIQRD   65 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---------~~~~~lv~e~~~~~~L~~~~~~--~~---------~i~~~l~~Lh~~~~~~i~h~d   65 (188)
                      +.+++||||++++++         ....+++++++ +++|.+++..  ..         |++.||.|||+   .+++|+|
T Consensus        70 l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~d  145 (345)
T cd07877          70 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRD  145 (345)
T ss_pred             HHHcCCCcccceeeeeeecccccccccEEEEehhc-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecC
Confidence            567899999999887         13467777776 5799887732  22         99999999999   9999999


Q ss_pred             CCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccc
Q 039565           66 MKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        66 l~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      ++|+||+++.++.++++|||++.....     ......++..|++||       ++.++|+||||+++|++++|..||..
T Consensus       146 lkp~NIll~~~~~~kl~dfg~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~  220 (345)
T cd07877         146 LKPSNLAVNEDCELKILDFGLARHTDD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG  220 (345)
T ss_pred             CChHHEEEcCCCCEEEecccccccccc-----cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            999999999999999999998864321     122345677788888       36789999999999999999988843


Q ss_pred             cCCCC-------------------cC-----------------------HHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          139 SFKGE-------------------FD-----------------------IISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       139 ~~~~~-------------------~~-----------------------~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      .....                   .+                       ......+.+++..|++.+|.+||++.+++.
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~  299 (345)
T cd07877         221 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  299 (345)
T ss_pred             CCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhc
Confidence            21100                   00                       012346789999999999999999999886

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=4.5e-28  Score=191.69  Aligned_cols=158  Identities=23%  Similarity=0.239  Sum_probs=136.0

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      |.+.+.|.||++|.-   ....|++||-|-||.|...+ ++..           -+.+|++|||+   ++||+|||||+|
T Consensus       474 m~~~~s~fIvrLYrTfrd~kyvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~---k~iIYRDLKPEN  550 (732)
T KOG0614|consen  474 MMECRSDFIVRLYRTFRDSKYVYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHR---KGIIYRDLKPEN  550 (732)
T ss_pred             HHhcCchHHHHHHHHhccchhhhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHh---cCceeccCChhh
Confidence            456788999999988   77889999999999999999 3333           67899999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC---
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK---  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~---  141 (188)
                      ++++.+|-+||.|||+++...   ....+.+++||+.|.|||      .+.++|.||+|+++||+++|.+||....+   
T Consensus       551 llLd~~Gy~KLVDFGFAKki~---~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmkt  627 (732)
T KOG0614|consen  551 LLLDNRGYLKLVDFGFAKKIG---SGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKT  627 (732)
T ss_pred             eeeccCCceEEeehhhHHHhc---cCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHH
Confidence            999999999999999998643   445678899999999999      47889999999999999999999975433   


Q ss_pred             ----------CCcCHHHHHHHHHHHHHccCcCCCCCCC
Q 039565          142 ----------GEFDIISVEKAVEIAMASVSSKVNRRPL  169 (188)
Q Consensus       142 ----------~~~~~~~~~~~~~l~~~cl~~~p~~Rps  169 (188)
                                .+++........+++......+|..|.-
T Consensus       628 Yn~ILkGid~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG  665 (732)
T KOG0614|consen  628 YNLILKGIDKIEFPRRITKTATDLIKKLCRDNPTERLG  665 (732)
T ss_pred             HHHHHhhhhhhhcccccchhHHHHHHHHHhcCcHhhhc
Confidence                      2356666777888888888889999874

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.94  E-value=2e-27  Score=187.39  Aligned_cols=166  Identities=16%  Similarity=0.183  Sum_probs=125.4

Q ss_pred             cccccCCCeeeeccc--C---------------CccEEEEecCCCCChhhhcCCc--c---------cHHHHHHHHhcCC
Q 039565            6 RNKLTGPLLVELIGK--Q---------------KNNALELGFRGNPELVDQQGKE--E---------VCCPGLEYLHQGL   57 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~---------------~~~~lv~e~~~~~~L~~~~~~~--~---------~i~~~l~~Lh~~~   57 (188)
                      +.+++||||+++++.  .               ...++++||++ ++|.+++...  .         |++.||.|||+  
T Consensus        56 l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~--  132 (342)
T cd07854          56 IRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYME-TDLANVLEQGPLSEEHARLFMYQLLRGLKYIHS--  132 (342)
T ss_pred             HHhcCCCcchhhHhhhcccccccccccccccccceEEEEeeccc-ccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh--
Confidence            567899999999877  1               24689999998 5898887322  2         99999999999  


Q ss_pred             CCCcEEeCCCCCcEEEcc-CCceEEecccCcccccCCCCC-cceeeecccccccCCC-------CCCccchHHHHHHHHH
Q 039565           58 KHPIIQRDMKSTNILLNE-KVQAKLADFGQSRISPVEGGT-HMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILE  128 (188)
Q Consensus        58 ~~~i~h~dl~~~nill~~-~~~~kl~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~  128 (188)
                       .+++|+|+||+||+++. ++.++++|||.+......... .......++..|+|||       ++.++|+|||||++|+
T Consensus       133 -~givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~e  211 (342)
T cd07854         133 -ANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAE  211 (342)
T ss_pred             -CCcccCCCCHHHEEEcCCCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHH
Confidence             99999999999999975 567899999988653211111 1111234566788888       3568999999999999


Q ss_pred             HHhCCccccccCC------------------------------------CCc-----CHHHHHHHHHHHHHccCcCCCCC
Q 039565          129 IITGILTVDLSFK------------------------------------GEF-----DIISVEKAVEIAMASVSSKVNRR  167 (188)
Q Consensus       129 ~~~g~~p~~~~~~------------------------------------~~~-----~~~~~~~~~~l~~~cl~~~p~~R  167 (188)
                      +++|..||.....                                    ...     ....+..+.+++.+|++.+|++|
T Consensus       212 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  291 (342)
T cd07854         212 MLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDR  291 (342)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhc
Confidence            9999998853210                                    000     00123567799999999999999


Q ss_pred             CCHHHHHH
Q 039565          168 PLMNQVVM  175 (188)
Q Consensus       168 ps~~~i~~  175 (188)
                      ||+++++.
T Consensus       292 ~t~~ell~  299 (342)
T cd07854         292 LTAEEALM  299 (342)
T ss_pred             cCHHHHhC
Confidence            99999985

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.94  E-value=4.2e-27  Score=185.65  Aligned_cols=161  Identities=20%  Similarity=0.222  Sum_probs=126.4

Q ss_pred             cccccCCCeeeeccc---C------CccEEEEecCCCCChhhhcCC--cc---------cHHHHHHHHhcCCCCCcEEeC
Q 039565            6 RNKLTGPLLVELIGK---Q------KNNALELGFRGNPELVDQQGK--EE---------VCCPGLEYLHQGLKHPIIQRD   65 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~------~~~~lv~e~~~~~~L~~~~~~--~~---------~i~~~l~~Lh~~~~~~i~h~d   65 (188)
                      +++++||||++++++   .      ...++++||+ +++|..++..  ..         |++.||+|||+   .+++|+|
T Consensus        68 l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~gi~H~d  143 (343)
T cd07880          68 LKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHA---AGIIHRD  143 (343)
T ss_pred             HHhcCCCCccceeeeecCCccccccceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCC
Confidence            567899999999987   2      2358999999 5689888732  22         99999999999   9999999


Q ss_pred             CCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccc
Q 039565           66 MKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        66 l~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      ++|+||+++.++.++++|||++.....     ......++..|++||       .+.++|+||||+++|++++|..||..
T Consensus       144 lkp~Nill~~~~~~kl~dfg~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~  218 (343)
T cd07880         144 LKPGNLAVNEDCELKILDFGLARQTDS-----EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKG  218 (343)
T ss_pred             CCHHHEEEcCCCCEEEeeccccccccc-----CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            999999999999999999998875321     112234566788888       45689999999999999999998863


Q ss_pred             cCCCC------------------------------------------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          139 SFKGE------------------------------------------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       139 ~~~~~------------------------------------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      .....                                          ........+.+++.+|++.+|.+|||+.++++
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~  297 (343)
T cd07880         219 HDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA  297 (343)
T ss_pred             CCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            21100                                          00012335789999999999999999999984

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=4.6e-27  Score=182.44  Aligned_cols=152  Identities=23%  Similarity=0.331  Sum_probs=129.4

Q ss_pred             CCeeeeccc---CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEccC
Q 039565           12 PLLVELIGK---QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTNILLNEK   76 (188)
Q Consensus        12 pniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~   76 (188)
                      |.++++..+   -+.+++||||+.+|+|-..+++.+            ++|.||-|||+   .+|++||||..|++++..
T Consensus       410 pFL~qlHScFQTmDRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~---kgIiYRDLKLDNvmLd~e  486 (683)
T KOG0696|consen  410 PFLVQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSE  486 (683)
T ss_pred             chHHHHHHHhhhhhheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhc---CCeeeeeccccceEeccC
Confidence            444555444   678999999999999988885544            99999999999   999999999999999999


Q ss_pred             CceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCCC-------
Q 039565           77 VQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKGE-------  143 (188)
Q Consensus        77 ~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~~-------  143 (188)
                      |++||+|||.++.-.  .......+++||+.|+|||      ++.++|.||||+++|||+.|+.||+.....+       
T Consensus       487 GHiKi~DFGmcKEni--~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~e  564 (683)
T KOG0696|consen  487 GHIKIADFGMCKENI--FDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIME  564 (683)
T ss_pred             CceEeeecccccccc--cCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHH
Confidence            999999999987432  2233466799999999999      6899999999999999999999998765433       


Q ss_pred             ----cCHHHHHHHHHHHHHccCcCCCCCC
Q 039565          144 ----FDIISVEKAVEIAMASVSSKVNRRP  168 (188)
Q Consensus       144 ----~~~~~~~~~~~l~~~cl~~~p~~Rp  168 (188)
                          ++...+.+..++....+.+.|.+|.
T Consensus       565 hnvsyPKslSkEAv~ickg~ltK~P~kRL  593 (683)
T KOG0696|consen  565 HNVSYPKSLSKEAVAICKGLLTKHPGKRL  593 (683)
T ss_pred             ccCcCcccccHHHHHHHHHHhhcCCcccc
Confidence                5667788889999999999999996

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.94  E-value=1.1e-28  Score=181.56  Aligned_cols=164  Identities=23%  Similarity=0.260  Sum_probs=129.0

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcC------Ccc-----------cHHHHHHHHhcCCCCCcEEeC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQG------KEE-----------VCCPGLEYLHQGLKHPIIQRD   65 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~------~~~-----------~i~~~l~~Lh~~~~~~i~h~d   65 (188)
                      |+.-+-||||+++|.   ..-.|+-||.|+ .||..+..      +..           -...||.||-+  +..|||||
T Consensus       117 mks~~cp~IVkfyGa~F~EGdcWiCMELMd-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~--~lkiIHRD  193 (361)
T KOG1006|consen  117 MKSSNCPNIVKFYGALFSEGDCWICMELMD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKE--ELKIIHRD  193 (361)
T ss_pred             HhhcCCcHHHHHhhhhhcCCceeeeHHHHh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHH--Hhhhhhcc
Confidence            455678999999999   788999999998 47766541      111           45689999987  48999999


Q ss_pred             CCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC--------CCCccchHHHHHHHHHHHhCCcccc
Q 039565           66 MKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE--------LTEKSDVDSFEIVILEIITGILTVD  137 (188)
Q Consensus        66 l~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe--------~~~~~di~s~G~~l~~~~~g~~p~~  137 (188)
                      +||+|||++..|.+||+|||++....  .+ -..+.-.|+..|||||        ++.++|+||+|+++||+.||..|+.
T Consensus       194 vKPSNILldr~G~vKLCDFGIcGqLv--~S-iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr  270 (361)
T KOG1006|consen  194 VKPSNILLDRHGDVKLCDFGICGQLV--DS-IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYR  270 (361)
T ss_pred             CChhheEEecCCCEeeecccchHhHH--HH-HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcc
Confidence            99999999999999999999986432  11 1122346888899999        6788999999999999999999873


Q ss_pred             c-----------------cCCCC-cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          138 L-----------------SFKGE-FDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       138 ~-----------------~~~~~-~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      .                 .+..+ ........+..++..|+.+|...||..+++.+
T Consensus       271 ~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~  326 (361)
T KOG1006|consen  271 KWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK  326 (361)
T ss_pred             hHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence            2                 11111 11346778999999999999999999998875

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.94  E-value=4.1e-27  Score=177.34  Aligned_cols=163  Identities=20%  Similarity=0.222  Sum_probs=131.4

Q ss_pred             cCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEc
Q 039565           10 TGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTNILLN   74 (188)
Q Consensus        10 ~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~   74 (188)
                      .|+||++++++   +...|||||-+.||+|...+.+..            +++.||.|||.   ++|.|||+||+|||-.
T Consensus       134 gh~nilqLiefFEdd~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~---kgIAHRDlKPENiLC~  210 (463)
T KOG0607|consen  134 GHKNILQLIEFFEDDTRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHT---KGIAHRDLKPENILCE  210 (463)
T ss_pred             CCccHHHHHHHhcccceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhh---cCcccccCCccceeec
Confidence            49999999999   888999999999999999982222            99999999999   9999999999999997


Q ss_pred             cCC---ceEEecccCcccccC-----CCCCcceeeecccccccCCC-----------CCCccchHHHHHHHHHHHhCCcc
Q 039565           75 EKV---QAKLADFGQSRISPV-----EGGTHMSTTIAGTAGFLNTE-----------LTEKSDVDSFEIVILEIITGILT  135 (188)
Q Consensus        75 ~~~---~~kl~d~~~~~~~~~-----~~~~~~~~~~~~~~~~~~pe-----------~~~~~di~s~G~~l~~~~~g~~p  135 (188)
                      +..   -+||+||.+...+..     +.......+..|+..|||||           |+.++|.||+|+++|-|++|..|
T Consensus       211 ~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpP  290 (463)
T KOG0607|consen  211 SPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPP  290 (463)
T ss_pred             CCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCC
Confidence            764   479999987653221     22233345678999999999           68999999999999999999999


Q ss_pred             ccccCC--------------------------CCcCH----HHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          136 VDLSFK--------------------------GEFDI----ISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       136 ~~~~~~--------------------------~~~~~----~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      |...-.                          -+++.    ..+....+++...+..++.+|.++.+++.
T Consensus       291 FvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln  360 (463)
T KOG0607|consen  291 FVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN  360 (463)
T ss_pred             ccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence            843211                          11232    34556778889999999999999988876

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=1.3e-26  Score=180.68  Aligned_cols=176  Identities=19%  Similarity=0.185  Sum_probs=140.2

Q ss_pred             cccCCCeeeeccc-------CCccEEEEecCCCCChhhhcCCcc-----------cHHHHHHHHhcC-----CCCCcEEe
Q 039565            8 KLTGPLLVELIGK-------QKNNALELGFRGNPELVDQQGKEE-----------VCCPGLEYLHQG-----LKHPIIQR   64 (188)
Q Consensus         8 ~l~Hpniv~~~~~-------~~~~~lv~e~~~~~~L~~~~~~~~-----------~i~~~l~~Lh~~-----~~~~i~h~   64 (188)
                      .|+|+||+.+++.       -.++|||++|=+.|||.+|+.+..           .+|.||++||..     .+..|.||
T Consensus       261 mLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHR  340 (513)
T KOG2052|consen  261 MLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHR  340 (513)
T ss_pred             HhccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhcc
Confidence            3899999999998       356899999999999999995544           889999999942     25689999


Q ss_pred             CCCCCcEEEccCCceEEecccCcccccCCCC--CcceeeecccccccCCCC------------CCccchHHHHHHHHHHH
Q 039565           65 DMKSTNILLNEKVQAKLADFGQSRISPVEGG--THMSTTIAGTAGFLNTEL------------TEKSDVDSFEIVILEII  130 (188)
Q Consensus        65 dl~~~nill~~~~~~kl~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~pe~------------~~~~di~s~G~~l~~~~  130 (188)
                      |||+.|||+.+++.+-|+|+|++........  ....+...||.+|||||.            =..+||||||.++||+.
T Consensus       341 DlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEia  420 (513)
T KOG2052|consen  341 DLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIA  420 (513)
T ss_pred             ccccccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHH
Confidence            9999999999999999999999986542211  122346799999999992            25699999999999987


Q ss_pred             hCC----------ccccccCC------------------CC-----cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHH
Q 039565          131 TGI----------LTVDLSFK------------------GE-----FDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVR  177 (188)
Q Consensus       131 ~g~----------~p~~~~~~------------------~~-----~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l  177 (188)
                      ..-          .||.+-.+                  +.     .+...+..+.+++..||..+|.-|-|+-.|.+.|
T Consensus       421 rRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl  500 (513)
T KOG2052|consen  421 RRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTL  500 (513)
T ss_pred             HHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHH
Confidence            422          35422111                  11     2335677899999999999999999999999999


Q ss_pred             hhccCc
Q 039565          178 EQGSGS  183 (188)
Q Consensus       178 ~~~~~~  183 (188)
                      .++...
T Consensus       501 ~~l~~~  506 (513)
T KOG2052|consen  501 AKLSNS  506 (513)
T ss_pred             HHHhcC
Confidence            887754

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.94  E-value=1.3e-26  Score=172.68  Aligned_cols=164  Identities=27%  Similarity=0.364  Sum_probs=133.8

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc--c---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE--E---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~--~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +++++|+||+++.+.   ....++++||+++++|.+++ ...  .         +++.++.|||+   .+++|+|++|.|
T Consensus        41 ~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~i~~~n  117 (244)
T smart00220       41 LKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKKRGRLSEDEARFYARQILSALEYLHS---NGIIHRDLKPEN  117 (244)
T ss_pred             HHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHH---cCeecCCcCHHH
Confidence            456799999999998   68899999999999999998 322  2         89999999999   899999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCC--
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKG--  142 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~--  142 (188)
                      |+++.++.++++|||.+.......   ......++..|++||      ++.++|+||||++++++++|..||+.....  
T Consensus       118 i~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~  194 (244)
T smart00220      118 ILLDEDGHVKLADFGLARQLDPGG---LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLE  194 (244)
T ss_pred             eEECCCCcEEEccccceeeecccc---ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHH
Confidence            999999999999999887543211   223345667788888      577999999999999999999888651110  


Q ss_pred             ----------CcCHH---HHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          143 ----------EFDII---SVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       143 ----------~~~~~---~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                .....   .+..+.+++.+|+..+|++||++.++++
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      195 LFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             HHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence                      01111   5578999999999999999999999986

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.93  E-value=1.4e-26  Score=178.37  Aligned_cols=170  Identities=20%  Similarity=0.231  Sum_probs=136.9

Q ss_pred             cccCCCeeeeccc----CCccEEEEecCCCCChhhhcCCcc--------------------cHHHHHHHHhcCCCCCcEE
Q 039565            8 KLTGPLLVELIGK----QKNNALELGFRGNPELVDQQGKEE--------------------VCCPGLEYLHQGLKHPIIQ   63 (188)
Q Consensus         8 ~l~Hpniv~~~~~----~~~~~lv~e~~~~~~L~~~~~~~~--------------------~i~~~l~~Lh~~~~~~i~h   63 (188)
                      .+.|||+..+.++    ...-++++.++..|+|..++....                    |++.|++|||.   .+++|
T Consensus       343 ~~sH~nll~V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~---~~ViH  419 (563)
T KOG1024|consen  343 GASHPNLLSVLGVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHN---HGVIH  419 (563)
T ss_pred             cCcCCCccceeEEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHh---cCccc
Confidence            3579999999998    778889999999999999993111                    99999999999   99999


Q ss_pred             eCCCCCcEEEccCCceEEecccCcccccCCCCCc-ceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCcc
Q 039565           64 RDMKSTNILLNEKVQAKLADFGQSRISPVEGGTH-MSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILT  135 (188)
Q Consensus        64 ~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p  135 (188)
                      .|+..+|.++++.-++|++|-.+++-.- +..-. .-.....+..||++|      ++.++|+||||+++||++| |+.|
T Consensus       420 kDiAaRNCvIdd~LqVkltDsaLSRDLF-P~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~P  498 (563)
T KOG1024|consen  420 KDIAARNCVIDDQLQVKLTDSALSRDLF-PGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLP  498 (563)
T ss_pred             chhhhhcceehhheeEEeccchhccccC-cccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCC
Confidence            9999999999999999999988887432 11111 111122345688888      8999999999999999986 6677


Q ss_pred             ccccCC------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhcc
Q 039565          136 VDLSFK------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGS  181 (188)
Q Consensus       136 ~~~~~~------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~  181 (188)
                      +.+..+            ...+..++.+++.++.-||...|++||+++|++.-|.+..
T Consensus       499 yaeIDPfEm~~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~  556 (563)
T KOG1024|consen  499 YAEIDPFEMEHYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFH  556 (563)
T ss_pred             ccccCHHHHHHHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence            644322            2244568889999999999999999999999999887654

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.93  E-value=1.9e-26  Score=199.30  Aligned_cols=166  Identities=12%  Similarity=0.168  Sum_probs=118.2

Q ss_pred             cccccC-CCeeeeccc----------CCccEEEEecCCCCChhhhcCC-cc------------cHHHHHHHHhcCCCCCc
Q 039565            6 RNKLTG-PLLVELIGK----------QKNNALELGFRGNPELVDQQGK-EE------------VCCPGLEYLHQGLKHPI   61 (188)
Q Consensus         6 l~~l~H-pniv~~~~~----------~~~~~lv~e~~~~~~L~~~~~~-~~------------~i~~~l~~Lh~~~~~~i   61 (188)
                      .+.++| +||.++++.          +.....++|+++ ++|.++++. ..            |++.||+|||+   .+|
T Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~---~gI  101 (793)
T PLN00181         26 SKSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECED-VSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHS---QGI  101 (793)
T ss_pred             cchhhHHHHHHHhhcccCCccccccccchhhhhhccCC-ccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHh---CCe
Confidence            456778 688877775          346678888875 699999932 21            99999999999   999


Q ss_pred             EEeCCCCCcEEEccCCc-------------------eEEecccCcccccCCCC--------------Ccceeeecccccc
Q 039565           62 IQRDMKSTNILLNEKVQ-------------------AKLADFGQSRISPVEGG--------------THMSTTIAGTAGF  108 (188)
Q Consensus        62 ~h~dl~~~nill~~~~~-------------------~kl~d~~~~~~~~~~~~--------------~~~~~~~~~~~~~  108 (188)
                      +||||||+|||++..+.                   +|++|||+++.......              ........|++.|
T Consensus       102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y  181 (793)
T PLN00181        102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY  181 (793)
T ss_pred             eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence            99999999999965444                   55556665542110000              0000113577889


Q ss_pred             cCCC------CCCccchHHHHHHHHHHHhCCccccccCC-------CCcCH---HHHHHHHHHHHHccCcCCCCCCCHHH
Q 039565          109 LNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK-------GEFDI---ISVEKAVEIAMASVSSKVNRRPLMNQ  172 (188)
Q Consensus       109 ~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~-------~~~~~---~~~~~~~~l~~~cl~~~p~~Rps~~~  172 (188)
                      +|||      ++.++|||||||++|||+++..|+.....       ...+.   .......+++.+||+.+|.+||++.+
T Consensus       182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~P~~Rps~~e  261 (793)
T PLN00181        182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRHRVLPPQILLNWPKEASFCLWLLHPEPSCRPSMSE  261 (793)
T ss_pred             EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHHHhhcChhhhhcCHHHHHHHHHhCCCChhhCcChHH
Confidence            9999      58899999999999999999877653210       00111   12345668888999999999999999


Q ss_pred             HHH
Q 039565          173 VVM  175 (188)
Q Consensus       173 i~~  175 (188)
                      +++
T Consensus       262 il~  264 (793)
T PLN00181        262 LLQ  264 (793)
T ss_pred             Hhh
Confidence            986

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.93  E-value=5e-26  Score=178.46  Aligned_cols=174  Identities=22%  Similarity=0.235  Sum_probs=136.7

Q ss_pred             cccCCCeeeeccc-------CCccEEEEecCCCCChhhhcCCcc-----------cHHHHHHHHhcCC------CCCcEE
Q 039565            8 KLTGPLLVELIGK-------QKNNALELGFRGNPELVDQQGKEE-----------VCCPGLEYLHQGL------KHPIIQ   63 (188)
Q Consensus         8 ~l~Hpniv~~~~~-------~~~~~lv~e~~~~~~L~~~~~~~~-----------~i~~~l~~Lh~~~------~~~i~h   63 (188)
                      .++|+||+++++.       ...+|||++|-+.|+|.+|++.+.           .+++||+|||+..      +.+|+|
T Consensus       260 ~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaH  339 (534)
T KOG3653|consen  260 GMKHENILQFIGAEKRGTADRMEYWLVTEFHPKGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAH  339 (534)
T ss_pred             CccchhHHHhhchhccCCccccceeEEeeeccCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCcccc
Confidence            5899999999999       348899999999999999994443           8899999999654      457999


Q ss_pred             eCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CC-----CccchHHHHHHHHHHHh
Q 039565           64 RDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LT-----EKSDVDSFEIVILEIIT  131 (188)
Q Consensus        64 ~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~-----~~~di~s~G~~l~~~~~  131 (188)
                      ||+|..|||+-.++.+-|+|||++..+.............||.+|||||       +.     .+.||||+|.++||+++
T Consensus       340 RDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~S  419 (534)
T KOG3653|consen  340 RDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIAS  419 (534)
T ss_pred             ccccccceEEccCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999998776444444455689999999999       22     46899999999999998


Q ss_pred             CCccccccCCCC------------------------------cCH-----HHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          132 GILTVDLSFKGE------------------------------FDI-----ISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       132 g~~p~~~~~~~~------------------------------~~~-----~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                      ...-+++...++                              ++.     ..+..+++.+..||..|++-|.|+.=+-+.
T Consensus       420 RC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR  499 (534)
T KOG3653|consen  420 RCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEER  499 (534)
T ss_pred             hcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHH
Confidence            653221110000                              111     234468899999999999999998776666


Q ss_pred             Hhhcc
Q 039565          177 REQGS  181 (188)
Q Consensus       177 l~~~~  181 (188)
                      +.++.
T Consensus       500 ~~~l~  504 (534)
T KOG3653|consen  500 MAELM  504 (534)
T ss_pred             HHHHh
Confidence            65543

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.93  E-value=6.5e-27  Score=193.51  Aligned_cols=163  Identities=22%  Similarity=0.300  Sum_probs=131.4

Q ss_pred             ccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc--c--------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            9 LTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE--E--------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         9 l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~--~--------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      =+|||||+.++.   ++.+|+.+|.|. -+|.+++...  .              |++.||++||+   .+|+||||||+
T Consensus       560 D~H~NviRyyc~E~d~qF~YIalELC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHs---l~iVHRDLkPQ  635 (903)
T KOG1027|consen  560 DEHPNVIRYYCSEQDRQFLYIALELCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHS---LKIVHRDLKPQ  635 (903)
T ss_pred             cCCCceEEEEeeccCCceEEEEehHhh-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHh---cccccccCCCc
Confidence            369999999999   888999999998 5999999431  1              99999999999   99999999999


Q ss_pred             cEEEccC-----CceEEecccCcccccCCCCC-cceeeecccccccCCC------CCCccchHHHHHHHHHHHhC-Cccc
Q 039565           70 NILLNEK-----VQAKLADFGQSRISPVEGGT-HMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITG-ILTV  136 (188)
Q Consensus        70 nill~~~-----~~~kl~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g-~~p~  136 (188)
                      ||||+.+     .+.+|+|||+++......+. .......|+.+|+|||      -+.++||+|+||++|+.++| .-||
T Consensus       636 NILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpF  715 (903)
T KOG1027|consen  636 NILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPF  715 (903)
T ss_pred             eEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCC
Confidence            9999862     46899999999876533332 2234578999999999      46789999999999999887 5788


Q ss_pred             cccCCCC-------cCH---HHHH--HHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          137 DLSFKGE-------FDI---ISVE--KAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       137 ~~~~~~~-------~~~---~~~~--~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ......+       ...   ....  ...+++.++++.+|..||++.+|+.
T Consensus       716 Gd~~~R~~NIl~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~  766 (903)
T KOG1027|consen  716 GDSLERQANILTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLN  766 (903)
T ss_pred             CchHHhhhhhhcCccceeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhC
Confidence            7654332       100   1111  7889999999999999999999864

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=2.7e-26  Score=179.59  Aligned_cols=167  Identities=24%  Similarity=0.323  Sum_probs=134.8

Q ss_pred             ccccCCCeeeeccc----CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            7 NKLTGPLLVELIGK----QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         7 ~~l~Hpniv~~~~~----~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.|+||.||++|++    .+..|-|+|||+|.+|..|+++..            |+..||.||.+ .+..|||.||||.|
T Consensus       522 KeLDHpRIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNE-ikpPIIHYDLKPgN  600 (775)
T KOG1151|consen  522 KELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNE-IKPPIIHYDLKPGN  600 (775)
T ss_pred             hccCcceeeeeeeeeeeccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhc-cCCCeeeeccCCcc
Confidence            46899999999999    788899999999999999994443            99999999986 45689999999999


Q ss_pred             EEEcc---CCceEEecccCcccccCCC-----CCcceeeecccccccCCC----------CCCccchHHHHHHHHHHHhC
Q 039565           71 ILLNE---KVQAKLADFGQSRISPVEG-----GTHMSTTIAGTAGFLNTE----------LTEKSDVDSFEIVILEIITG  132 (188)
Q Consensus        71 ill~~---~~~~kl~d~~~~~~~~~~~-----~~~~~~~~~~~~~~~~pe----------~~~~~di~s~G~~l~~~~~g  132 (188)
                      ||+..   .|.+||.|||+++++....     .........||++|++||          ++.++|+||.||++|.++.|
T Consensus       601 ILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYG  680 (775)
T KOG1151|consen  601 ILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYG  680 (775)
T ss_pred             EEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhcc
Confidence            99964   4678999999999875321     222334578999999888          68999999999999999999


Q ss_pred             CccccccCCCC---------------cC--HHHHHHHHHHHHHccCcCCCCCCCHHHHH
Q 039565          133 ILTVDLSFKGE---------------FD--IISVEKAVEIAMASVSSKVNRRPLMNQVV  174 (188)
Q Consensus       133 ~~p~~~~~~~~---------------~~--~~~~~~~~~l~~~cl~~~p~~Rps~~~i~  174 (188)
                      +.||.......               ++  +..+.....++..||...-++|....++.
T Consensus       681 rKPFGhnqsQQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA  739 (775)
T KOG1151|consen  681 RKPFGHNQSQQDILQENTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLA  739 (775)
T ss_pred             CCCCCCchhHHHHHhhhchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence            99996432211               11  23456788999999999999988766654

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.93  E-value=1.4e-25  Score=186.76  Aligned_cols=152  Identities=19%  Similarity=0.190  Sum_probs=113.7

Q ss_pred             CCccEEEEecCCCCChhhhc-CCc-------------------------------ccHHHHHHHHhcCCCCCcEEeCCCC
Q 039565           21 QKNNALELGFRGNPELVDQQ-GKE-------------------------------EVCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus        21 ~~~~~lv~e~~~~~~L~~~~-~~~-------------------------------~~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      ....++++||+.+++|.+++ ...                               .|++.||.|||+   .+|+||||||
T Consensus       207 ~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~---~gIiHRDLKP  283 (566)
T PLN03225        207 EDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS---TGIVHRDVKP  283 (566)
T ss_pred             CCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH---CCEEeCcCCH
Confidence            56789999999999999887 221                               078999999999   9999999999


Q ss_pred             CcEEEcc-CCceEEecccCcccccCCCCCcceeeecccccccCCCC----------------------------CCccch
Q 039565           69 TNILLNE-KVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTEL----------------------------TEKSDV  119 (188)
Q Consensus        69 ~nill~~-~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~----------------------------~~~~di  119 (188)
                      +|||++. ++.+||+|||+++... ...........+++.|++||.                            ..++||
T Consensus       284 ~NILl~~~~~~~KL~DFGlA~~l~-~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DV  362 (566)
T PLN03225        284 QNIIFSEGSGSFKIIDLGAAADLR-VGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDI  362 (566)
T ss_pred             HHEEEeCCCCcEEEEeCCCccccc-cccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCccc
Confidence            9999986 5789999999997543 122223345677888999981                            124599


Q ss_pred             HHHHHHHHHHHhCCccccccCC---------------------CCcCHH----------HHHHHHHHHHHccCcCCCCCC
Q 039565          120 DSFEIVILEIITGILTVDLSFK---------------------GEFDII----------SVEKAVEIAMASVSSKVNRRP  168 (188)
Q Consensus       120 ~s~G~~l~~~~~g~~p~~~~~~---------------------~~~~~~----------~~~~~~~l~~~cl~~~p~~Rp  168 (188)
                      |||||++|+|+++..+.+....                     ......          ......+++..|++.||++||
T Consensus       363 wSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~  442 (566)
T PLN03225        363 YSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRI  442 (566)
T ss_pred             HHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCC
Confidence            9999999999987765442110                     000000          011234899999999999999


Q ss_pred             CHHHHHHH
Q 039565          169 LMNQVVMV  176 (188)
Q Consensus       169 s~~~i~~~  176 (188)
                      |++++++.
T Consensus       443 ta~e~L~H  450 (566)
T PLN03225        443 SAKAALAH  450 (566)
T ss_pred             CHHHHhCC
Confidence            99999873

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=2.9e-26  Score=194.61  Aligned_cols=160  Identities=22%  Similarity=0.269  Sum_probs=126.8

Q ss_pred             CCCeeee-ccc--CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEcc
Q 039565           11 GPLLVEL-IGK--QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTNILLNE   75 (188)
Q Consensus        11 Hpniv~~-~~~--~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~   75 (188)
                      .+.|+++ |.+  ..++|+||||++||+|-..+.+..            .+..||.-+|+   .|+||||+||+|||++.
T Consensus       134 s~Wiv~LhyAFQD~~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~---mgyVHRDiKPDNvLld~  210 (1317)
T KOG0612|consen  134 SEWIVQLHYAFQDERYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHS---MGYVHRDIKPDNVLLDK  210 (1317)
T ss_pred             cHHHHHHHHHhcCccceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHh---ccceeccCCcceeEecc
Confidence            3446666 333  889999999999999999993332            88999999999   99999999999999999


Q ss_pred             CCceEEecccCcccccCCCCCcceeeecccccccCCC-----------CCCccchHHHHHHHHHHHhCCccccccC----
Q 039565           76 KVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-----------LTEKSDVDSFEIVILEIITGILTVDLSF----  140 (188)
Q Consensus        76 ~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-----------~~~~~di~s~G~~l~~~~~g~~p~~~~~----  140 (188)
                      .|++||+|||.+-.+. ..+.-......|||-|.+||           |+..+|.||+||++|||+.|..||-...    
T Consensus       211 ~GHikLADFGsClkm~-~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveT  289 (1317)
T KOG0612|consen  211 SGHIKLADFGSCLKMD-ADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVET  289 (1317)
T ss_pred             cCcEeeccchhHHhcC-CCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHH
Confidence            9999999999887654 33344455679999999998           6899999999999999999999983210    


Q ss_pred             ---------CCCcC--HHHHHHHHHHHHHccCcCCCCCCC---HHHHHH
Q 039565          141 ---------KGEFD--IISVEKAVEIAMASVSSKVNRRPL---MNQVVM  175 (188)
Q Consensus       141 ---------~~~~~--~~~~~~~~~l~~~cl~~~p~~Rps---~~~i~~  175 (188)
                               .-.+|  ...++...++|...+. +|+.|..   ++++-.
T Consensus       290 Y~KIm~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~  337 (1317)
T KOG0612|consen  290 YGKIMNHKESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKN  337 (1317)
T ss_pred             HHHHhchhhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHh
Confidence                     11122  3467788888887766 6777776   777654

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.92  E-value=1.9e-25  Score=156.63  Aligned_cols=164  Identities=18%  Similarity=0.180  Sum_probs=125.1

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc-c------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE-E------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~-~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      ++.++|+|||+++++   ++.+.+|+|||+. +|..+.+.. +            |++.||.|+|+   +.+.|||+||+
T Consensus        55 lkelkhknivrl~dvlhsdkkltlvfe~cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchs---hnvlhrdlkpq  130 (292)
T KOG0662|consen   55 LKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHS---HNVLHRDLKPQ  130 (292)
T ss_pred             HHHhhhcceeehhhhhccCceeEEeHHHhhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhh---hhhhhccCCcc
Confidence            467899999999999   8899999999985 888888332 2            99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHh-CCccccccC-
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIIT-GILTVDLSF-  140 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~-g~~p~~~~~-  140 (188)
                      |.+++.+|.+|++|||+++.+..+-  ..-.....|.+|.+|.       ++...|+||-||++.|+.. |++.|.... 
T Consensus       131 nllin~ngelkladfglarafgipv--rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dv  208 (292)
T KOG0662|consen  131 NLLINRNGELKLADFGLARAFGIPV--RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV  208 (292)
T ss_pred             eEEeccCCcEEecccchhhhcCCce--EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcH
Confidence            9999999999999999998764221  1222334566777777       7899999999999999984 555442110 


Q ss_pred             -------------------------CC-----Cc---------CHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          141 -------------------------KG-----EF---------DIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       141 -------------------------~~-----~~---------~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                               ++     .+         -+.....-.++++..+.-+|.+|.+++..++
T Consensus       209 ddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq  282 (292)
T KOG0662|consen  209 DDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ  282 (292)
T ss_pred             HHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence                                     00     00         0111223457888888889999999988765

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.91  E-value=1.4e-24  Score=184.24  Aligned_cols=80  Identities=29%  Similarity=0.412  Sum_probs=71.9

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +..++||||+++++.   ....++||||+.+++|.+++....            |++.||.|||.   .+|+||||||+|
T Consensus        58 l~~l~hp~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~---~gIiHrDLKP~N  134 (669)
T cd05610          58 LALSKSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHR---HGIIHRDLKPDN  134 (669)
T ss_pred             HHhcCCCCcCeEEEEEEECCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCccHHH
Confidence            456799999999887   788999999999999999983221            89999999999   899999999999


Q ss_pred             EEEccCCceEEecccCcc
Q 039565           71 ILLNEKVQAKLADFGQSR   88 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~   88 (188)
                      |+++.++.++|+|||+++
T Consensus       135 ILl~~~g~vkL~DFGls~  152 (669)
T cd05610         135 MLISNEGHIKLTDFGLSK  152 (669)
T ss_pred             EEEcCCCCEEEEeCCCCc
Confidence            999999999999999875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.91  E-value=1.7e-25  Score=168.15  Aligned_cols=163  Identities=20%  Similarity=0.206  Sum_probs=129.4

Q ss_pred             cccccCCCeeeeccc---------CCccEEEEecCCCCChhhhcCCcc----------cHHHHHHHHhcCCCCCcEEeCC
Q 039565            6 RNKLTGPLLVELIGK---------QKNNALELGFRGNPELVDQQGKEE----------VCCPGLEYLHQGLKHPIIQRDM   66 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---------~~~~~lv~e~~~~~~L~~~~~~~~----------~i~~~l~~Lh~~~~~~i~h~dl   66 (188)
                      +..++|+||++++.+         -...|+|||+++ ++|...+....          |++.|+.|||+   .+|+||||
T Consensus        69 ~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~-~nl~~vi~~elDH~tis~i~yq~~~~ik~lhs---~~IihRdL  144 (369)
T KOG0665|consen   69 MKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELMD-ANLCQVILMELDHETISYILYQMLCGIKHLHS---AGIIHRDL  144 (369)
T ss_pred             hhhhcccceeeeeeccCccccHHHHHhHHHHHHhhh-hHHHHHHHHhcchHHHHHHHHHHHHHHHHHHh---cceeeccc
Confidence            567899999999999         356799999998 58888873222          99999999999   99999999


Q ss_pred             CCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           67 KSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        67 ~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      ||+||++..++.+|+.|||+++.-.   ..........+..|.|||      +.+.+||||.||++.||++|...|....
T Consensus       145 kPsnivv~~~~~lKi~dfg~ar~e~---~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d  221 (369)
T KOG0665|consen  145 KPSNIVVNSDCTLKILDFGLARTED---TDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKD  221 (369)
T ss_pred             CcccceecchhheeeccchhhcccC---cccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCch
Confidence            9999999999999999999987432   222344566777899999      6889999999999999999986442111


Q ss_pred             C-----------------------------------------------------CCcCHHHHHHHHHHHHHccCcCCCCC
Q 039565          141 K-----------------------------------------------------GEFDIISVEKAVEIAMASVSSKVNRR  167 (188)
Q Consensus       141 ~-----------------------------------------------------~~~~~~~~~~~~~l~~~cl~~~p~~R  167 (188)
                      .                                                     .+.+......+.+++..+|-.+|++|
T Consensus       222 ~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~R  301 (369)
T KOG0665|consen  222 HIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKR  301 (369)
T ss_pred             HHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhc
Confidence            0                                                     00111223356689999999999999


Q ss_pred             CCHHHHHH
Q 039565          168 PLMNQVVM  175 (188)
Q Consensus       168 ps~~~i~~  175 (188)
                      -|++++++
T Consensus       302 isv~daL~  309 (369)
T KOG0665|consen  302 ISVDDALR  309 (369)
T ss_pred             ccHHHHhc
Confidence            99999886

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.91  E-value=2.2e-24  Score=154.64  Aligned_cols=122  Identities=23%  Similarity=0.159  Sum_probs=96.8

Q ss_pred             cHHHHHHHHhcCCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccc
Q 039565           45 VCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSD  118 (188)
Q Consensus        45 ~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~d  118 (188)
                      |++.||.|||+   .+      ||+||+++.++.+++  ||.+......       ...|+..|+|||      ++.++|
T Consensus        25 qi~~~L~~lH~---~~------kp~Nil~~~~~~~~~--fG~~~~~~~~-------~~~g~~~y~aPE~~~~~~~~~~~D   86 (176)
T smart00750       25 QCLRALRELHR---QA------KSGNILLTWDGLLKL--DGSVAFKTPE-------QSRVDPYFMAPEVIQGQSYTEKAD   86 (176)
T ss_pred             HHHHHHHHHHh---cC------CcccEeEcCccceee--ccceEeeccc-------cCCCcccccChHHhcCCCCcchhh
Confidence            99999999998   55      999999999999998  9988754311       125788999999      578999


Q ss_pred             hHHHHHHHHHHHhCCccccccCCC-------------C------cCHHHHH--HHHHHHHHccCcCCCCCCCHHHHHHHH
Q 039565          119 VDSFEIVILEIITGILTVDLSFKG-------------E------FDIISVE--KAVEIAMASVSSKVNRRPLMNQVVMVR  177 (188)
Q Consensus       119 i~s~G~~l~~~~~g~~p~~~~~~~-------------~------~~~~~~~--~~~~l~~~cl~~~p~~Rps~~~i~~~l  177 (188)
                      |||||+++|+|++|..||......             .      .......  .+.+++..||+.+|.+||++.++++.+
T Consensus        87 iwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~  166 (176)
T smart00750       87 IYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHC  166 (176)
T ss_pred             HHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHH
Confidence            999999999999999988532210             0      1112222  589999999999999999999999988


Q ss_pred             hhccCcc
Q 039565          178 EQGSGSR  184 (188)
Q Consensus       178 ~~~~~~~  184 (188)
                      .......
T Consensus       167 ~~~~~~~  173 (176)
T smart00750      167 RALFAET  173 (176)
T ss_pred             HHHHHHH
Confidence            7665443

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.91  E-value=2.1e-24  Score=184.53  Aligned_cols=152  Identities=23%  Similarity=0.289  Sum_probs=115.9

Q ss_pred             CCccEEEEecCCCCChhhhcCCcc-------------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEccCCceEEecccCc
Q 039565           21 QKNNALELGFRGNPELVDQQGKEE-------------VCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQS   87 (188)
Q Consensus        21 ~~~~~lv~e~~~~~~L~~~~~~~~-------------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~   87 (188)
                      ...+|+-||||+..+|.++++++.             +++.||.|+|+   .++||||+||.||+++++..+||+|||++
T Consensus       668 ~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~---~giIHRDLKP~NIFLd~~~~VKIGDFGLA  744 (1351)
T KOG1035|consen  668 PLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHD---QGIIHRDLKPRNIFLDSRNSVKIGDFGLA  744 (1351)
T ss_pred             ceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHh---CceeeccCCcceeEEcCCCCeeecccccc
Confidence            456799999999877777773222             99999999999   99999999999999999999999999998


Q ss_pred             cccc------C----------CCCCcceeeecccccccCCC---------CCCccchHHHHHHHHHHHhCCccc------
Q 039565           88 RISP------V----------EGGTHMSTTIAGTAGFLNTE---------LTEKSDVDSFEIVILEIITGILTV------  136 (188)
Q Consensus        88 ~~~~------~----------~~~~~~~~~~~~~~~~~~pe---------~~~~~di~s~G~~l~~~~~g~~p~------  136 (188)
                      ....      .          .......+...||..|+|||         ++.++|+||+|++++||+.-..+-      
T Consensus       745 t~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~yPF~TsMERa~i  824 (1351)
T KOG1035|consen  745 TDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLYPFGTSMERASI  824 (1351)
T ss_pred             hhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhccCCchHHHHHH
Confidence            7510      0          01111234578999999999         678999999999999998642100      


Q ss_pred             -----cccCC--CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          137 -----DLSFK--GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       137 -----~~~~~--~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                           +...+  ..+.......-.+++.++++.||.+|||+.+++.
T Consensus       825 L~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~  870 (1351)
T KOG1035|consen  825 LTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLN  870 (1351)
T ss_pred             HHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhh
Confidence                 11111  1122334456678999999999999999999886

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.91  E-value=1.3e-24  Score=159.30  Aligned_cols=166  Identities=20%  Similarity=0.194  Sum_probs=127.0

Q ss_pred             cccccCCCeeeeccc-----------CCccEEEEecCCCCChhhhcCCc-c------------cHHHHHHHHhcCCCCCc
Q 039565            6 RNKLTGPLLVELIGK-----------QKNNALELGFRGNPELVDQQGKE-E------------VCCPGLEYLHQGLKHPI   61 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-----------~~~~~lv~e~~~~~~L~~~~~~~-~------------~i~~~l~~Lh~~~~~~i   61 (188)
                      |..++|+|+++++++           ....++||++|+. +|..++... .            ++..||.|+|.   ..|
T Consensus        70 L~~lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr---~ki  145 (376)
T KOG0669|consen   70 LQLLKHENVVNLIEICRTKATPTNRDRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHR---NKI  145 (376)
T ss_pred             HHHhcchhHHHHHHHHhhccCCcccccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHH---hhH
Confidence            456789999999988           3457999999995 888888332 1            88999999999   999


Q ss_pred             EEeCCCCCcEEEccCCceEEecccCcccccCCCCC--cceeeecccccccCCC-------CCCccchHHHHHHHHHHHhC
Q 039565           62 IQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGT--HMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITG  132 (188)
Q Consensus        62 ~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g  132 (188)
                      +|||+|+.|++++.+|.+|++|||+++.+......  ..-+....|.+|.+||       +++..|+|+.||++.+|.++
T Consensus       146 lHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtr  225 (376)
T KOG0669|consen  146 LHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTR  225 (376)
T ss_pred             HhhcccHhhEEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHcc
Confidence            99999999999999999999999999765322211  1123345677888888       79999999999999999998


Q ss_pred             Cccccc-------------------cCCCC--------------cCH-------H------HHHHHHHHHHHccCcCCCC
Q 039565          133 ILTVDL-------------------SFKGE--------------FDI-------I------SVEKAVEIAMASVSSKVNR  166 (188)
Q Consensus       133 ~~p~~~-------------------~~~~~--------------~~~-------~------~~~~~~~l~~~cl~~~p~~  166 (188)
                      ...+..                   ..+++              .+.       .      -.....+++..++..||.+
T Consensus       226 spimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~k  305 (376)
T KOG0669|consen  226 SPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTK  305 (376)
T ss_pred             CccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCccc
Confidence            863311                   11111              000       0      0125678999999999999


Q ss_pred             CCCHHHHHH
Q 039565          167 RPLMNQVVM  175 (188)
Q Consensus       167 Rps~~~i~~  175 (188)
                      |+.+++++.
T Consensus       306 R~~ad~aln  314 (376)
T KOG0669|consen  306 RIDADQALN  314 (376)
T ss_pred             CcchHhhhc
Confidence            999988765

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.90  E-value=1.6e-24  Score=154.65  Aligned_cols=127  Identities=28%  Similarity=0.347  Sum_probs=105.0

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc----CCcc------------cHHHHHHHHhcCCCCCcEEeCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ----GKEE------------VCCPGLEYLHQGLKHPIIQRDM   66 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~----~~~~------------~i~~~l~~Lh~~~~~~i~h~dl   66 (188)
                      ++....|.+|.++|.   ....|+.||.++ .||..+.    ++..            .+..||.|||+  +..++|||+
T Consensus        99 ~r~~~CPf~V~FyGa~~regdvwIcME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~--kL~vIHRDv  175 (282)
T KOG0984|consen   99 MRTVDCPFTVHFYGALFREGDVWICMELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHS--KLSVIHRDV  175 (282)
T ss_pred             ccCCCCCeEEEeehhhhccccEEEeHHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHH--HhhhhhccC
Confidence            345568999999998   788999999998 4887776    2222            77899999998  489999999


Q ss_pred             CCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC----------CCCccchHHHHHHHHHHHhCCccc
Q 039565           67 KSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE----------LTEKSDVDSFEIVILEIITGILTV  136 (188)
Q Consensus        67 ~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe----------~~~~~di~s~G~~l~~~~~g~~p~  136 (188)
                      ||+|||++..|++|++|||++....  ++ -..+.-.|+..|+|||          ++.++||||+|+++.||.+++.|+
T Consensus       176 KPsNiLIn~~GqVKiCDFGIsG~L~--dS-iAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY  252 (282)
T KOG0984|consen  176 KPSNILINYDGQVKICDFGISGYLV--DS-IAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPY  252 (282)
T ss_pred             CcceEEEccCCcEEEcccccceeeh--hh-hHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccc
Confidence            9999999999999999999987542  11 1122256888999998          688999999999999999999998


Q ss_pred             cc
Q 039565          137 DL  138 (188)
Q Consensus       137 ~~  138 (188)
                      +.
T Consensus       253 ~~  254 (282)
T KOG0984|consen  253 ES  254 (282)
T ss_pred             cc
Confidence            64

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.90  E-value=1.1e-23  Score=160.28  Aligned_cols=155  Identities=21%  Similarity=0.316  Sum_probs=127.7

Q ss_pred             ccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CC--cc---------cHHHHHHHHhcCCCCCcEEeCCCCCcEEE
Q 039565            9 LTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GK--EE---------VCCPGLEYLHQGLKHPIIQRDMKSTNILL   73 (188)
Q Consensus         9 l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~--~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~nill   73 (188)
                      -+||.+|-+..+   ...+++|.||..+|+|--.+ ++  .+         +++-||.|||+   +|||+||+|..|+++
T Consensus       308 sn~pflvglhscfqtesrlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~---rgiiyrdlkldnvll  384 (593)
T KOG0695|consen  308 SNNPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHE---RGIIYRDLKLDNVLL  384 (593)
T ss_pred             cCCCeEEehhhhhcccceEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhh---cCeeeeeccccceEE
Confidence            468888888777   77889999999999998877 22  22         89999999999   999999999999999


Q ss_pred             ccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCCC----
Q 039565           74 NEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKGE----  143 (188)
Q Consensus        74 ~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~~----  143 (188)
                      +..|++|+.|||.++.-  ........+++||+.|.|||      +.-..|.|++|++++||+.|+.|||-.-.++    
T Consensus       385 daeghikltdygmcke~--l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~n  462 (593)
T KOG0695|consen  385 DAEGHIKLTDYGMCKEG--LGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMN  462 (593)
T ss_pred             ccCCceeecccchhhcC--CCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccc
Confidence            99999999999998742  22334567899999999999      6888999999999999999999997432211    


Q ss_pred             ---------------cCHHHHHHHHHHHHHccCcCCCCCC
Q 039565          144 ---------------FDIISVEKAVEIAMASVSSKVNRRP  168 (188)
Q Consensus       144 ---------------~~~~~~~~~~~l~~~cl~~~p~~Rp  168 (188)
                                     .+...+.+...++..-+++||..|.
T Consensus       463 tedylfqvilekqiriprslsvkas~vlkgflnkdp~erl  502 (593)
T KOG0695|consen  463 TEDYLFQVILEKQIRIPRSLSVKASHVLKGFLNKDPKERL  502 (593)
T ss_pred             hhHHHHHHHhhhcccccceeehhhHHHHHHhhcCCcHHhc
Confidence                           2333444677888899999999875

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.90  E-value=3.4e-24  Score=174.11  Aligned_cols=164  Identities=21%  Similarity=0.264  Sum_probs=134.4

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +...+|||||.++|.   .+.+|+.||||.+|+|++...--+            +.+.|+.|||+   .+-+|||+|-.|
T Consensus        66 ~~dc~h~nivay~gsylr~dklwicMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs---~gk~hRdiKGan  142 (829)
T KOG0576|consen   66 LRDCRHPNIVAYFGSYLRRDKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHS---QGKIHRDIKGAN  142 (829)
T ss_pred             eecCCCcChHHHHhhhhhhcCcEEEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhc---CCcccccccccc
Confidence            567899999999999   899999999999999999882222            77899999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC---------CCCccchHHHHHHHHHHHhCCcc-c----
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE---------LTEKSDVDSFEIVILEIITGILT-V----  136 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe---------~~~~~di~s~G~~l~~~~~g~~p-~----  136 (188)
                      |++++.|.+|++|||++-.++  ..-.....+.|+++||+||         +...+|+|+.|+...|+-.-+.| |    
T Consensus       143 illtd~gDvklaDfgvsaqit--ati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhp  220 (829)
T KOG0576|consen  143 ILLTDEGDVKLADFGVSAQIT--ATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHP  220 (829)
T ss_pred             eeecccCceeecccCchhhhh--hhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccch
Confidence            999999999999999876432  2333456789999999999         68899999999998888666543 2    


Q ss_pred             ------------cccCCCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          137 ------------DLSFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       137 ------------~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                  ++... +......+-+-+++..|+.++|.+||+++.+++
T Consensus       221 mr~l~LmTkS~~qpp~l-kDk~kws~~fh~fvK~altknpKkRptaeklL~  270 (829)
T KOG0576|consen  221 MRALFLMTKSGFQPPTL-KDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ  270 (829)
T ss_pred             HHHHHHhhccCCCCCcc-cCCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence                        22211 122356677889999999999999999987654

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.88  E-value=8.5e-23  Score=165.71  Aligned_cols=133  Identities=20%  Similarity=0.281  Sum_probs=108.0

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      |..-+.+.||++|-.   .+++|+||+|++||++-.++ +..-           ++.-|+++.|.   .|.|||||||+|
T Consensus       683 LAEADn~WVVrLyySFQDkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHk---mGFIHRDiKPDN  759 (1034)
T KOG0608|consen  683 LAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDN  759 (1034)
T ss_pred             HhhcCCcceEEEEEEeccCCceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHh---ccceecccCccc
Confidence            345567889999776   89999999999999999888 3322           78889999999   999999999999


Q ss_pred             EEEccCCceEEecccCccccc-C-------CCCC--------------------------------cceeeecccccccC
Q 039565           71 ILLNEKVQAKLADFGQSRISP-V-------EGGT--------------------------------HMSTTIAGTAGFLN  110 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~-~-------~~~~--------------------------------~~~~~~~~~~~~~~  110 (188)
                      ||||.+|++||.|||++..+. .       .+..                                -......||+.|++
T Consensus       760 ILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyia  839 (1034)
T KOG0608|consen  760 ILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIA  839 (1034)
T ss_pred             eEEccCCceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccC
Confidence            999999999999999986431 0       0000                                00012569999999


Q ss_pred             CC------CCCccchHHHHHHHHHHHhCCccccccCC
Q 039565          111 TE------LTEKSDVDSFEIVILEIITGILTVDLSFK  141 (188)
Q Consensus       111 pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~  141 (188)
                      ||      ++..+|.||.||++|+|+.|+.||-...+
T Consensus       840 pevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp  876 (1034)
T KOG0608|consen  840 PEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTP  876 (1034)
T ss_pred             hHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCC
Confidence            99      68889999999999999999999965444

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.88  E-value=2.1e-22  Score=146.50  Aligned_cols=147  Identities=30%  Similarity=0.478  Sum_probs=121.9

Q ss_pred             CcccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc----c---------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            5 NRNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE----E---------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~----~---------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      .+..++|++|+++++.   ....++++|++++++|.+++...    .         +++.++.+||+   .+++|+|++|
T Consensus        44 ~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~~~H~dl~~  120 (215)
T cd00180          44 ILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHS---NGIIHRDLKP  120 (215)
T ss_pred             HHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCH
Confidence            3567889999999999   56899999999999999999332    1         99999999999   8999999999


Q ss_pred             CcEEEcc-CCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           69 TNILLNE-KVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        69 ~nill~~-~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      .||+++. ++.++++||+.+........  ......+...|.+||       .+.+.|+|++|++++++           
T Consensus       121 ~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-----------  187 (215)
T cd00180         121 ENILLDSDNGKVKLADFGLSKLLTSDKS--LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-----------  187 (215)
T ss_pred             hhEEEeCCCCcEEEecCCceEEccCCcc--hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-----------
Confidence            9999999 89999999998875432111  122234555667776       45779999999999998           


Q ss_pred             CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          141 KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       141 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                               ..+.+++..|++.+|.+||+++++++.
T Consensus       188 ---------~~~~~~l~~~l~~~p~~R~~~~~l~~~  214 (215)
T cd00180         188 ---------PELKDLIRKMLQKDPEKRPSAKEILEH  214 (215)
T ss_pred             ---------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence                     788999999999999999999999864

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.88  E-value=5.6e-24  Score=169.55  Aligned_cols=163  Identities=21%  Similarity=0.254  Sum_probs=132.6

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      |.+++||.||.+..-   ++..++|||-+-|.-|+.++ ...+            |++.||.|||.   .+|+|+||||+
T Consensus       617 Lq~l~HPGiV~le~M~ET~ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~---knIvHCDLKPE  693 (888)
T KOG4236|consen  617 LQNLHHPGIVNLECMFETPERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHF---KNIVHCDLKPE  693 (888)
T ss_pred             HHhcCCCCeeEEEEeecCCceEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhh---cceeeccCCch
Confidence            457899999999666   88999999999876666666 2222            99999999999   99999999999


Q ss_pred             cEEEccC---CceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           70 NILLNEK---VQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        70 nill~~~---~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      |+|+++.   ..+|++|||++++.+   .........||+.|++||      +...-|+||.|+++|.-++|-.||++.-
T Consensus       694 NVLLas~~~FPQvKlCDFGfARiIg---EksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdE  770 (888)
T KOG4236|consen  694 NVLLASASPFPQVKLCDFGFARIIG---EKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDE  770 (888)
T ss_pred             heeeccCCCCCceeeccccceeecc---hhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCcc
Confidence            9999865   378999999999754   444566789999999999      7888999999999999999999996532


Q ss_pred             CCC------------cC-HHHHHHHHHHHHHccCcCCCCCCCHHHHH
Q 039565          141 KGE------------FD-IISVEKAVEIAMASVSSKVNRRPLMNQVV  174 (188)
Q Consensus       141 ~~~------------~~-~~~~~~~~~l~~~cl~~~p~~Rps~~~i~  174 (188)
                      ...            -+ .+.+....++++..++..-.+|.|.++-+
T Consensus       771 dIndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~l  817 (888)
T KOG4236|consen  771 DINDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSL  817 (888)
T ss_pred             chhHHhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhc
Confidence            211            11 23456788999999999999999887654

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.88  E-value=6.7e-23  Score=148.53  Aligned_cols=159  Identities=16%  Similarity=0.231  Sum_probs=124.2

Q ss_pred             CCCeeeeccc-----CCccEEEEecCCCCChhhhcCCcc---------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEccC
Q 039565           11 GPLLVELIGK-----QKNNALELGFRGNPELVDQQGKEE---------VCCPGLEYLHQGLKHPIIQRDMKSTNILLNEK   76 (188)
Q Consensus        11 Hpniv~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~   76 (188)
                      ||||++++++     .....||+||+.+.+.........         +++.||.|||+   .||.|||+||.|++++..
T Consensus        92 g~NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly~tl~d~dIryY~~elLkALdyCHS---~GImHRDVKPhNvmIdh~  168 (338)
T KOG0668|consen   92 GPNIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLYPTLTDYDIRYYIYELLKALDYCHS---MGIMHRDVKPHNVMIDHE  168 (338)
T ss_pred             CCCeeehhhhhcCccccCchhHhhhhccccHHHHhhhhchhhHHHHHHHHHHHHhHHHh---cCcccccCCcceeeechh
Confidence            9999999999     567789999999888777764444         99999999999   999999999999999975


Q ss_pred             -CceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCcccccc---------
Q 039565           77 -VQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLS---------  139 (188)
Q Consensus        77 -~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~---------  139 (188)
                       -.+++.|+|++..+. ++  ..-+...++.++-.||       ++-.-|+|||||++..|+-.+.||=..         
T Consensus       169 ~rkLrlIDWGLAEFYH-p~--~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVk  245 (338)
T KOG0668|consen  169 LRKLRLIDWGLAEFYH-PG--KEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVK  245 (338)
T ss_pred             hceeeeeecchHhhcC-CC--ceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHH
Confidence             468999999998754 22  2233445666677777       688899999999999999888776110         


Q ss_pred             --------------------CCCC--------------------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          140 --------------------FKGE--------------------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       140 --------------------~~~~--------------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                          ++..                    -..-...+..+++...+..|-.+|+|+.+...
T Consensus       246 IakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~  321 (338)
T KOG0668|consen  246 IAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA  321 (338)
T ss_pred             HHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence                                0000                    01112357789999999999999999988654

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.88  E-value=3.8e-22  Score=163.39  Aligned_cols=150  Identities=19%  Similarity=0.185  Sum_probs=110.4

Q ss_pred             CccEEEEecCCCCChhhhcCC-c-----------------------------------ccHHHHHHHHhcCCCCCcEEeC
Q 039565           22 KNNALELGFRGNPELVDQQGK-E-----------------------------------EVCCPGLEYLHQGLKHPIIQRD   65 (188)
Q Consensus        22 ~~~~lv~e~~~~~~L~~~~~~-~-----------------------------------~~i~~~l~~Lh~~~~~~i~h~d   65 (188)
                      ...++|+||+++++|.++++. .                                   .|++.||.|||+   .+++|||
T Consensus       258 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~---~~ivHrD  334 (507)
T PLN03224        258 GSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHR---IGIVHRD  334 (507)
T ss_pred             CceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHH---CCeecCC
Confidence            467999999999999988721 0                                   078899999999   8999999


Q ss_pred             CCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCCCC----------------------------Ccc
Q 039565           66 MKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTELT----------------------------EKS  117 (188)
Q Consensus        66 l~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~----------------------------~~~  117 (188)
                      +||+||+++.++.++++|||++...... .........+++.|++||.-                            ...
T Consensus       335 LKp~NILl~~~~~~kL~DFGla~~~~~~-~~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~  413 (507)
T PLN03224        335 IKPENLLVTVDGQVKIIDFGAAVDMCTG-INFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLF  413 (507)
T ss_pred             CchHhEEECCCCcEEEEeCcCccccccC-CccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCcc
Confidence            9999999999999999999998643211 11111122346788998821                            236


Q ss_pred             chHHHHHHHHHHHhCCc-ccccc------CCC----------------CcC--HHHHHHHHHHHHHccCcCC---CCCCC
Q 039565          118 DVDSFEIVILEIITGIL-TVDLS------FKG----------------EFD--IISVEKAVEIAMASVSSKV---NRRPL  169 (188)
Q Consensus       118 di~s~G~~l~~~~~g~~-p~~~~------~~~----------------~~~--~~~~~~~~~l~~~cl~~~p---~~Rps  169 (188)
                      |+||+||++++|+++.. |+...      ...                .++  ........+++..++..+|   .+|+|
T Consensus       414 DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlS  493 (507)
T PLN03224        414 DSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLS  493 (507)
T ss_pred             chhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCC
Confidence            99999999999999874 55321      000                011  1234567899999999766   68999


Q ss_pred             HHHHHH
Q 039565          170 MNQVVM  175 (188)
Q Consensus       170 ~~~i~~  175 (188)
                      ++++++
T Consensus       494 a~eaL~  499 (507)
T PLN03224        494 VGQALS  499 (507)
T ss_pred             HHHHhC
Confidence            999886

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.88  E-value=9.6e-23  Score=156.47  Aligned_cols=153  Identities=18%  Similarity=0.239  Sum_probs=118.6

Q ss_pred             eeeeccc---CCccEEEEecCCCCChhhhcCCcc--------------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEcc-
Q 039565           14 LVELIGK---QKNNALELGFRGNPELVDQQGKEE--------------VCCPGLEYLHQGLKHPIIQRDMKSTNILLNE-   75 (188)
Q Consensus        14 iv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~--------------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~-   75 (188)
                      +|++.++   .++.++|+|.++ .|+.+++..+.              |++.+++|||+   .+++|-||||+||++.+ 
T Consensus       153 cv~m~~wFdyrghiCivfellG-~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~---~kl~HTDLKPENILfvss  228 (415)
T KOG0671|consen  153 CVQMRDWFDYRGHICIVFELLG-LSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHD---LKLTHTDLKPENILFVSS  228 (415)
T ss_pred             EEeeehhhhccCceEEEEeccC-hhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHh---cceeecCCChheEEEecc
Confidence            5777566   889999999996 49999994433              99999999999   99999999999999842 


Q ss_pred             -------------------CCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHH
Q 039565           76 -------------------KVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEII  130 (188)
Q Consensus        76 -------------------~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~  130 (188)
                                         +..++++|||.+....   .  -......|.-|.|||      ++..+|+||+||++.|+.
T Consensus       229 ~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~---e--~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~Ely  303 (415)
T KOG0671|consen  229 EYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDH---E--HHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELY  303 (415)
T ss_pred             ceEEEeccCCccceeccCCCcceEEEecCCcceec---c--CcceeeeccccCCchheeccCcCCccCceeeeeEEEEee
Confidence                               2357899999887421   1  124456677899999      799999999999999999


Q ss_pred             hCCccccccCC-----------------------------------CC----------------------cCHHHHHHHH
Q 039565          131 TGILTVDLSFK-----------------------------------GE----------------------FDIISVEKAV  153 (188)
Q Consensus       131 ~g~~p~~~~~~-----------------------------------~~----------------------~~~~~~~~~~  153 (188)
                      +|...|.....                                   ++                      ....+-..+.
T Consensus       304 tG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~Lf  383 (415)
T KOG0671|consen  304 TGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLF  383 (415)
T ss_pred             ccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHH
Confidence            99875421100                                   00                      0112334688


Q ss_pred             HHHHHccCcCCCCCCCHHHHHH
Q 039565          154 EIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       154 ~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      +++..++..||.+|+|+.+++.
T Consensus       384 DLl~~mL~fDP~~RiTl~EAL~  405 (415)
T KOG0671|consen  384 DLLRRMLEFDPARRITLREALS  405 (415)
T ss_pred             HHHHHHHccCccccccHHHHhc
Confidence            9999999999999999999876

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.86  E-value=8.5e-22  Score=146.24  Aligned_cols=171  Identities=15%  Similarity=0.203  Sum_probs=131.7

Q ss_pred             CCCcccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-cc-------------cHHHHHHHHhcCCCCCcEEeC
Q 039565            3 FPNRNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-EE-------------VCCPGLEYLHQGLKHPIIQRD   65 (188)
Q Consensus         3 ~~~l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~~-------------~i~~~l~~Lh~~~~~~i~h~d   65 (188)
                      ||.|+-+.||||+.+++.   +.++.+|..|++.|+|...++. .+             +++.|++|||+- +.-|.-.-
T Consensus       238 fp~lrifshpnilpvlgacnsppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~  316 (448)
T KOG0195|consen  238 FPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFY  316 (448)
T ss_pred             CcceeeecCCchhhhhhhccCCCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhh
Confidence            788999999999999998   8899999999999999999933 32             899999999972 12344456


Q ss_pred             CCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC---------CCCccchHHHHHHHHHHHhCCccc
Q 039565           66 MKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE---------LTEKSDVDSFEIVILEIITGILTV  136 (188)
Q Consensus        66 l~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe---------~~~~~di~s~G~~l~~~~~g~~p~  136 (188)
                      +++..++++++...+++- +-.+..      .......-.+.|++||         .-.++|+|||.+++||+.|...||
T Consensus       317 lns~hvmidedltarism-ad~kfs------fqe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpf  389 (448)
T KOG0195|consen  317 LNSKHVMIDEDLTARISM-ADTKFS------FQEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPF  389 (448)
T ss_pred             cccceEEecchhhhheec-ccceee------eeccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhcccccc
Confidence            888899999887666541 111110      0111223456788888         346799999999999999999999


Q ss_pred             cccCC-------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhcc
Q 039565          137 DLSFK-------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGS  181 (188)
Q Consensus       137 ~~~~~-------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~  181 (188)
                      .+-.+             ...++..+..+.+++.-|++.||.+||.++.|+-.||+..
T Consensus       390 adlspmecgmkialeglrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~  447 (448)
T KOG0195|consen  390 ADLSPMECGMKIALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI  447 (448)
T ss_pred             ccCCchhhhhhhhhccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence            65332             2355566778899999999999999999999999998754

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.85  E-value=9.3e-23  Score=151.36  Aligned_cols=157  Identities=18%  Similarity=0.213  Sum_probs=118.3

Q ss_pred             ccccCCCeeeeccc--------CCccEEEEecCCCCChhhhc-CC--cc---------cHHHHHHHHhcCCCCCcEEeCC
Q 039565            7 NKLTGPLLVELIGK--------QKNNALELGFRGNPELVDQQ-GK--EE---------VCCPGLEYLHQGLKHPIIQRDM   66 (188)
Q Consensus         7 ~~l~Hpniv~~~~~--------~~~~~lv~e~~~~~~L~~~~-~~--~~---------~i~~~l~~Lh~~~~~~i~h~dl   66 (188)
                      .-++|.|++..+++        =+.+|+++|.+. .+|..++ ..  ..         |+++||.|||+   .+|.|||+
T Consensus       107 cfFkHdNVLSaLDILQPph~dfFqEiYV~TELmQ-SDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHs---A~ILHRDI  182 (449)
T KOG0664|consen  107 SSFRHDNVLSLLDILQPANPSFFQELYVLTELMQ-SDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHT---ANILHRDI  182 (449)
T ss_pred             HhhccccHHHHHHhcCCCCchHHHHHHHHHHHHH-hhhhheeccCCCCCcchhhhhHHHHHhhhHHHhh---cchhhccC
Confidence            45689999999988        245688899887 4888888 22  22         99999999999   99999999


Q ss_pred             CCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCcccccc
Q 039565           67 KSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLS  139 (188)
Q Consensus        67 ~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~  139 (188)
                      ||.|.++++|..+|++|||+++.-. .......+....|.+|.+||       ++.+.||||.||++.|++..+..|...
T Consensus       183 KPGNLLVNSNCvLKICDFGLARvee-~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq  261 (449)
T KOG0664|consen  183 KPGNLLVNSNCILKICDFGLARTWD-QRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAA  261 (449)
T ss_pred             CCccEEeccCceEEecccccccccc-hhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhcc
Confidence            9999999999999999999998532 12222222345677899998       799999999999999999998888654


Q ss_pred             CCCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhcc
Q 039565          140 FKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGS  181 (188)
Q Consensus       140 ~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~  181 (188)
                      .+    ..+++-+.+++         .-||++++....|+.+
T Consensus       262 ~P----iqQL~lItdLL---------GTPs~EaMr~ACEGAk  290 (449)
T KOG0664|consen  262 GP----IEQLQMIIDLL---------GTPSQEAMKYACEGAK  290 (449)
T ss_pred             Ch----HHHHHHHHHHh---------CCCcHHHHHHHhhhhH
Confidence            32    34444444443         2466666665555543

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.84  E-value=1.3e-21  Score=155.78  Aligned_cols=154  Identities=19%  Similarity=0.157  Sum_probs=120.1

Q ss_pred             eeeeccc---CCccEEEEecCCCCChhhhcCCcc---------------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEcc
Q 039565           14 LVELIGK---QKNNALELGFRGNPELVDQQGKEE---------------VCCPGLEYLHQGLKHPIIQRDMKSTNILLNE   75 (188)
Q Consensus        14 iv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~---------------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~   75 (188)
                      +++++..   .+++|||||.+. .+|.+.+++.+               |+..||..|-.   .+|+|+||||.|||+++
T Consensus       496 clrl~r~F~hknHLClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~---c~vlHaDIKPDNiLVNE  571 (752)
T KOG0670|consen  496 CLRLFRHFKHKNHLCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKK---CGVLHADIKPDNILVNE  571 (752)
T ss_pred             HHHHHHHhhhcceeEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHh---cCeeecccCccceEecc
Confidence            4445444   789999999998 59999995444               99999999998   99999999999999987


Q ss_pred             C-CceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC--------
Q 039565           76 K-VQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF--------  140 (188)
Q Consensus        76 ~-~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~--------  140 (188)
                      + ..+||+|||.+....    ....+.+..+-+|.|||      ++...|+||.||++||+.||+..|....        
T Consensus       572 ~k~iLKLCDfGSA~~~~----eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~  647 (752)
T KOG0670|consen  572 SKNILKLCDFGSASFAS----ENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLF  647 (752)
T ss_pred             CcceeeeccCccccccc----cccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHH
Confidence            6 578999999886432    22334455667899999      6889999999999999999986331100        


Q ss_pred             ---------------------------------------------------------------CCCcCHHHHHHHHHHHH
Q 039565          141 ---------------------------------------------------------------KGEFDIISVEKAVEIAM  157 (188)
Q Consensus       141 ---------------------------------------------------------------~~~~~~~~~~~~~~l~~  157 (188)
                                                                                     ...-.......+.+++.
T Consensus       648 me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLd  727 (752)
T KOG0670|consen  648 MELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLD  727 (752)
T ss_pred             HHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHH
Confidence                                                                           01112345667889999


Q ss_pred             HccCcCCCCCCCHHHHHH
Q 039565          158 ASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       158 ~cl~~~p~~Rps~~~i~~  175 (188)
                      .|+..||++|.|..|.++
T Consensus       728 kml~LdP~KRit~nqAL~  745 (752)
T KOG0670|consen  728 KMLILDPEKRITVNQALK  745 (752)
T ss_pred             HHhccChhhcCCHHHHhc
Confidence            999999999999998775

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.83  E-value=3e-21  Score=142.96  Aligned_cols=159  Identities=18%  Similarity=0.242  Sum_probs=115.1

Q ss_pred             ccCCCeeeeccc----CCccEEEEecCCCCChhhhcCCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCcEEE
Q 039565            9 LTGPLLVELIGK----QKNNALELGFRGNPELVDQQGKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTNILL   73 (188)
Q Consensus         9 l~Hpniv~~~~~----~~~~~lv~e~~~~~~L~~~~~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~nill   73 (188)
                      -.|.||+.-+++    .+.+.+++||++.|+|.+-+.-.+           |+++|+.|+|+   ..++|||||.+|||+
T Consensus        78 s~H~hIi~tY~vaFqt~d~YvF~qE~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHs---knlVHRdlK~eNiLi  154 (378)
T KOG1345|consen   78 SPHQHIIDTYEVAFQTSDAYVFVQEFAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHS---KNLVHRDLKAENILI  154 (378)
T ss_pred             ccchhhhHHHHHHhhcCceEEEeeccCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhc---cchhhcccccceEEE
Confidence            359999999988    667789999999999999993333           99999999999   999999999999999


Q ss_pred             ccC--CceEEecccCcccccCCCCCcceeeecccccccCCC-----------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           74 NEK--VQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-----------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        74 ~~~--~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-----------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      -..  -++|++|||.++-.+   ..  .....-...|.+||           ..+..|+|.||++++.+++|.+||...-
T Consensus       155 f~~df~rvKlcDFG~t~k~g---~t--V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~  229 (378)
T KOG1345|consen  155 FDADFYRVKLCDFGLTRKVG---TT--VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKAS  229 (378)
T ss_pred             ecCCccEEEeeecccccccC---ce--ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhh
Confidence            543  489999999876422   11  11112223455555           3678999999999999999999985221


Q ss_pred             CCC----------------cC---HHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          141 KGE----------------FD---IISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       141 ~~~----------------~~---~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ...                .+   ...++++..+-..-+..++++|=...+..+
T Consensus       230 ~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk  283 (378)
T KOG1345|consen  230 IMDKPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKK  283 (378)
T ss_pred             ccCchHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCcccccchhHHHHH
Confidence            111                11   123445666666778888888844444433

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.81  E-value=7.8e-20  Score=134.98  Aligned_cols=129  Identities=30%  Similarity=0.389  Sum_probs=105.9

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-C-C--cc---------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-G-K--EE---------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~-~--~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++|+|++++++.   ....++++|++++++|.+++ . .  ..         +++.++.+||+   .+++|+|+++.
T Consensus        51 ~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~di~~~  127 (225)
T smart00221       51 LKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHS---LGIVHRDLKPE  127 (225)
T ss_pred             HHhCCCCChhhheeeeecCCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHH
Confidence            456789999999988   67899999999999999998 2 2  12         89999999999   89999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCCC-------CCccchHHHHHHHHHHHhCCccccc
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTEL-------TEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~-------~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      |++++.++.++++|||.+....... ........+...|++||.       +.++|+|+||++++++++|+.||+.
T Consensus       128 ni~v~~~~~~~l~d~g~~~~~~~~~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      128 NILLGMDGLVKLADFGLARFIHRDL-AALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             HEEEcCCCCEEEeeCceeeEecCcc-cccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence            9999999999999999887653221 112233455666777773       4689999999999999999999954

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.81  E-value=1.7e-20  Score=156.65  Aligned_cols=165  Identities=21%  Similarity=0.286  Sum_probs=130.5

Q ss_pred             ccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CC--cc---------cHHHHHHHHhcCCCCCcEEeCCCCCcE
Q 039565            7 NKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GK--EE---------VCCPGLEYLHQGLKHPIIQRDMKSTNI   71 (188)
Q Consensus         7 ~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~--~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~ni   71 (188)
                      .+++|||++..+..   .....-.||||++ +|..++ ..  ..         |++.|+.|+|+   .|+.|||+|++|+
T Consensus       376 ~~l~h~~~~e~l~~~~~~~~~~~~mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~---~GiahrdlK~enl  451 (601)
T KOG0590|consen  376 SSLSHPNIIETLDIVQEIDGILQSMEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHS---MGLAHRDLKLENL  451 (601)
T ss_pred             ccccCCchhhhHHHHhhcccchhhhhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHh---cCceeccCccccE
Confidence            45889999877766   2222233999998 999998 32  22         99999999999   9999999999999


Q ss_pred             EEccCCceEEecccCcccccCCCCC--cceeeecccccccCCCC-------CCccchHHHHHHHHHHHhCCccccccCCC
Q 039565           72 LLNEKVQAKLADFGQSRISPVEGGT--HMSTTIAGTAGFLNTEL-------TEKSDVDSFEIVILEIITGILTVDLSFKG  142 (188)
Q Consensus        72 ll~~~~~~kl~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~pe~-------~~~~di~s~G~~l~~~~~g~~p~~~~~~~  142 (188)
                      +++.+|.+|++|||.+..+......  .......|+..|+|||.       ....||||.|+++..|.+|+.||......
T Consensus       452 l~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~  531 (601)
T KOG0590|consen  452 LVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKS  531 (601)
T ss_pred             EEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCcccccccc
Confidence            9999999999999998876544444  45556889999999992       45689999999999999999888533221


Q ss_pred             C--------------------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          143 E--------------------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       143 ~--------------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      .                    .....+.+...++..+++.+|.+|-|+++|++
T Consensus       532 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~  584 (601)
T KOG0590|consen  532 DNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN  584 (601)
T ss_pred             ccchhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence            1                    11123445678888999999999999999986

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.81  E-value=1.9e-19  Score=145.08  Aligned_cols=175  Identities=23%  Similarity=0.268  Sum_probs=133.3

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc-------------cHHHHHHHHhcCCCCCc-EEeCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE-------------VCCPGLEYLHQGLKHPI-IQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~-------------~i~~~l~~Lh~~~~~~i-~h~dl~~   68 (188)
                      |+.+.|.|+.+++|.   +...+.|.+||+-|+|.+.+....             +++.||.|+|.   ..+ .|+.++.
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~---s~i~~hg~l~s   77 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHN---SPIGYHGALKS   77 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhc---Ccceeeeeecc
Confidence            568999999999999   888899999999999999993322             99999999998   444 9999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------------CCCccchHHHHHHHHHHHhCCcc
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------------LTEKSDVDSFEIVILEIITGILT  135 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------------~~~~~di~s~G~~l~~~~~g~~p  135 (188)
                      .|.+++..-.+|++|||+.................-..-|.+||             .+.++|+||||++++|+++...|
T Consensus        78 ~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~  157 (484)
T KOG1023|consen   78 SNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGP  157 (484)
T ss_pred             ccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCc
Confidence            99999999999999999987542100000011111112345555             36779999999999999999988


Q ss_pred             ccccCCCCc--------------------C-H-HHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          136 VDLSFKGEF--------------------D-I-ISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       136 ~~~~~~~~~--------------------~-~-~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                      |+.....+.                    . . .....+..++..||..+|..||++++|...++.....
T Consensus       158 ~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~  227 (484)
T KOG1023|consen  158 FDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG  227 (484)
T ss_pred             cccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence            865222111                    0 1 2233688999999999999999999999988877654

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.78  E-value=9.6e-20  Score=146.57  Aligned_cols=125  Identities=22%  Similarity=0.310  Sum_probs=104.3

Q ss_pred             CcccccCCCeeeeccc---CCccEEEEecC-CCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            5 NRNKLTGPLLVELIGK---QKNNALELGFR-GNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~---~~~~~lv~e~~-~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +|++=.|+||++++++   ++.+|+++|.- ++-+|.+++...+            |++.|+++||+   .+|+|||+|-
T Consensus       622 ~l~~~sH~NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~---~~ivhrdikd  698 (772)
T KOG1152|consen  622 TLNKHSHENILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHD---QGIVHRDIKD  698 (772)
T ss_pred             HhhhcCccchhhhhheeecCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccc---cCceeccccc
Confidence            3444559999999999   88888999975 4569999993333            99999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccc
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTV  136 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~  136 (188)
                      +|+.++.+|.+|+.|||.+....    ...-..+.||..|.|||       ....-|||++|+++|.++-...||
T Consensus       699 envivd~~g~~klidfgsaa~~k----sgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpy  769 (772)
T KOG1152|consen  699 ENVIVDSNGFVKLIDFGSAAYTK----SGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPY  769 (772)
T ss_pred             ccEEEecCCeEEEeeccchhhhc----CCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCC
Confidence            99999999999999999876432    12345688999999999       477889999999999888766665

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.75  E-value=5.2e-18  Score=134.26  Aligned_cols=62  Identities=26%  Similarity=0.415  Sum_probs=51.7

Q ss_pred             cCCCeeeeccc-------CCccEEEEecCCCCChhhhcCC--c-c-----------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565           10 TGPLLVELIGK-------QKNNALELGFRGNPELVDQQGK--E-E-----------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus        10 ~Hpniv~~~~~-------~~~~~lv~e~~~~~~L~~~~~~--~-~-----------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      .-.+||++++.       +.+.++|+|+... +|..++..  . +           |++.||.|||.  +.+|||-||||
T Consensus       140 ~~~~VV~LlD~FkhsGpNG~HVCMVfEvLGd-nLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~--ecgIIHTDlKP  216 (590)
T KOG1290|consen  140 GKKCVVQLLDHFKHSGPNGQHVCMVFEVLGD-NLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHR--ECGIIHTDLKP  216 (590)
T ss_pred             CCceeeeeeccceecCCCCcEEEEEehhhhh-HHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHH--hcCccccCCCc
Confidence            34568999887       7899999999974 88888822  1 1           99999999998  48999999999


Q ss_pred             CcEEEc
Q 039565           69 TNILLN   74 (188)
Q Consensus        69 ~nill~   74 (188)
                      +|||+.
T Consensus       217 ENvLl~  222 (590)
T KOG1290|consen  217 ENVLLC  222 (590)
T ss_pred             ceeeee
Confidence            999984

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.75  E-value=8.7e-18  Score=130.65  Aligned_cols=159  Identities=21%  Similarity=0.195  Sum_probs=116.8

Q ss_pred             ccCCCeeeeccc------------------------------CCccEEEEecCCCCChhhhc-CCcc----------cHH
Q 039565            9 LTGPLLVELIGK------------------------------QKNNALELGFRGNPELVDQQ-GKEE----------VCC   47 (188)
Q Consensus         9 l~Hpniv~~~~~------------------------------~~~~~lv~e~~~~~~L~~~~-~~~~----------~i~   47 (188)
                      -+|||||++.+.                              +..+|+||.-.+. +|.+++ .+..          |++
T Consensus       273 a~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~~s~r~~~~~laQlL  351 (598)
T KOG4158|consen  273 AKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRHRSYRTGRVILAQLL  351 (598)
T ss_pred             CCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCCCchHHHHHHHHHHH
Confidence            469999999876                              4566899988874 899999 3332          999


Q ss_pred             HHHHHHhcCCCCCcEEeCCCCCcEEEc--cC--CceEEecccCcccccCCCCC----cceeeecccccccCCCC------
Q 039565           48 PGLEYLHQGLKHPIIQRDMKSTNILLN--EK--VQAKLADFGQSRISPVEGGT----HMSTTIAGTAGFLNTEL------  113 (188)
Q Consensus        48 ~~l~~Lh~~~~~~i~h~dl~~~nill~--~~--~~~kl~d~~~~~~~~~~~~~----~~~~~~~~~~~~~~pe~------  113 (188)
                      +|+.|||.   ++|.|||+|++||++.  ++  ..+.++|||++-.-...+-+    .-....-|....|+||+      
T Consensus       352 Eav~hL~~---hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PG  428 (598)
T KOG4158|consen  352 EAVTHLHK---HGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPG  428 (598)
T ss_pred             HHHHHHHH---ccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCC
Confidence            99999999   9999999999999994  33  35789999976432111000    00112334456788883      


Q ss_pred             ------CCccchHHHHHHHHHHHhCCcccccc-------------CCCCcCHHHHHHHHHHHHHccCcCCCCCCCHH
Q 039565          114 ------TEKSDVDSFEIVILEIITGILTVDLS-------------FKGEFDIISVEKAVEIAMASVSSKVNRRPLMN  171 (188)
Q Consensus       114 ------~~~~di~s~G~~l~~~~~g~~p~~~~-------------~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~  171 (188)
                            =.++|.|+.|.+.||++....||-.+             .....+..++..+.+++...++.||.+|++.+
T Consensus       429 p~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~  505 (598)
T KOG4158|consen  429 PNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPN  505 (598)
T ss_pred             CceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCCCCcccCChHHHHHHHHHhcCCccccCCcc
Confidence                  25799999999999999998888431             11223445666788999999999999999854

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.73  E-value=4.1e-18  Score=132.47  Aligned_cols=162  Identities=19%  Similarity=0.216  Sum_probs=123.8

Q ss_pred             CCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc---------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEccC-C
Q 039565           11 GPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE---------VCCPGLEYLHQGLKHPIIQRDMKSTNILLNEK-V   77 (188)
Q Consensus        11 Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~-~   77 (188)
                      +.||+++.++   .++..+|+||.+..+..++.....         .+..||.++|.   .||+|||+||.|++.+.. +
T Consensus        94 ~~ni~~~~~~~rnnd~v~ivlp~~~H~~f~~l~~~l~~~~i~~Yl~~ll~Al~~~h~---~GIvHRDiKpsNFL~n~~t~  170 (418)
T KOG1167|consen   94 SDNIIKLNGCFRNNDQVAIVLPYFEHDRFRDLYRSLSLAEIRWYLRNLLKALAHLHK---NGIVHRDIKPSNFLYNRRTQ  170 (418)
T ss_pred             chhhhcchhhhccCCeeEEEecccCccCHHHHHhcCCHHHHHHHHHHHHHHhhhhhc---cCccccCCCccccccccccC
Confidence            6788899888   889999999999988888884444         88999999999   999999999999999865 6


Q ss_pred             ceEEecccCccccc---------C-------C--------------------------CCCcceeeecccccccCCC---
Q 039565           78 QAKLADFGQSRISP---------V-------E--------------------------GGTHMSTTIAGTAGFLNTE---  112 (188)
Q Consensus        78 ~~kl~d~~~~~~~~---------~-------~--------------------------~~~~~~~~~~~~~~~~~pe---  112 (188)
                      +-.|.|||++....         .       .                          ..........||++|.+||   
T Consensus       171 rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~  250 (418)
T KOG1167|consen  171 RGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLF  250 (418)
T ss_pred             CceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHh
Confidence            77899999986210         0       0                          0001112356899999999   


Q ss_pred             ----CCCccchHHHHHHHHHHHhCCcccc----------------------------cc--CCC----------------
Q 039565          113 ----LTEKSDVDSFEIVILEIITGILTVD----------------------------LS--FKG----------------  142 (188)
Q Consensus       113 ----~~~~~di~s~G~~l~~~~~g~~p~~----------------------------~~--~~~----------------  142 (188)
                          -+++.|+||.|+++..++++..||=                            ..  +++                
T Consensus       251 k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s  330 (418)
T KOG1167|consen  251 RCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFET  330 (418)
T ss_pred             hccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhc
Confidence                4788999999999999999987650                            00  000                


Q ss_pred             -----------------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          143 -----------------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       143 -----------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                       ......+..+.+++.+|+..||.+|.|+++.++
T Consensus       331 ~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALk  380 (418)
T KOG1167|consen  331 LHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALK  380 (418)
T ss_pred             cChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence                             001112336789999999999999999999876

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.66  E-value=2.5e-16  Score=124.51  Aligned_cols=103  Identities=17%  Similarity=0.196  Sum_probs=77.3

Q ss_pred             cccccCCCeee-ecccCCccEEEEecCCCCChhhhcCCc-c----cHHHHHHHHhcCCCCCcEEeCC-CCCcEEEccCCc
Q 039565            6 RNKLTGPLLVE-LIGKQKNNALELGFRGNPELVDQQGKE-E----VCCPGLEYLHQGLKHPIIQRDM-KSTNILLNEKVQ   78 (188)
Q Consensus         6 l~~l~Hpniv~-~~~~~~~~~lv~e~~~~~~L~~~~~~~-~----~i~~~l~~Lh~~~~~~i~h~dl-~~~nill~~~~~   78 (188)
                      |.+++|+|++. +++. ...+++|||+++++|....... .    +++.||.|||+   .+|+|||| ||+||+++.++.
T Consensus        75 L~~L~h~~iv~~l~~~-~~~~LVmE~~~G~~L~~~~~~~~~~~~~~i~~aL~~lH~---~gIiHrDL~KP~NILv~~~~~  150 (365)
T PRK09188         75 LKTVRGIGVVPQLLAT-GKDGLVRGWTEGVPLHLARPHGDPAWFRSAHRALRDLHR---AGITHNDLAKPQNWLMGPDGE  150 (365)
T ss_pred             HHhccCCCCCcEEEEc-CCcEEEEEccCCCCHHHhCccchHHHHHHHHHHHHHHHH---CCCeeCCCCCcceEEEcCCCC
Confidence            56789999885 4443 4679999999999997432211 1    89999999999   99999999 999999999999


Q ss_pred             eEEecccCcccccCCCCCcc------eeeecccccccCCC
Q 039565           79 AKLADFGQSRISPVEGGTHM------STTIAGTAGFLNTE  112 (188)
Q Consensus        79 ~kl~d~~~~~~~~~~~~~~~------~~~~~~~~~~~~pe  112 (188)
                      ++|+|||+++..........      .....++..|.+||
T Consensus       151 ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe  190 (365)
T PRK09188        151 AAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPD  190 (365)
T ss_pred             EEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcc
Confidence            99999999986542221111      12345566677777

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.62  E-value=1.9e-16  Score=128.83  Aligned_cols=161  Identities=25%  Similarity=0.235  Sum_probs=129.4

Q ss_pred             ccc-CCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCcE
Q 039565            8 KLT-GPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTNI   71 (188)
Q Consensus         8 ~l~-Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~ni   71 (188)
                      .++ ||.++++.-.   +...++++++..+|.|...+.+..            .++-|++++|.   .+++|+|+|++||
T Consensus        52 ~~~~~~f~v~lhyafqt~~kl~l~ld~~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~---l~iiyrd~k~eni  128 (612)
T KOG0603|consen   52 FVHNTPFLVKLHYAFQTDGKLYLILDFLRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHK---LGIAYRDYKLENV  128 (612)
T ss_pred             hccCCCceeeeeeeeccccchhHhhhhcccchhhhccccCCchHHHHHHHHHHHHHHHHhhcch---hHHHHhcccccce
Confidence            344 8899998655   889999999999999998883333            78899999999   9999999999999


Q ss_pred             EEccCCceEEecccCcccccCCCCCcceeeecccccccCCC----CCCccchHHHHHHHHHHHhCCcccccc-------C
Q 039565           72 LLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE----LTEKSDVDSFEIVILEIITGILTVDLS-------F  140 (188)
Q Consensus        72 ll~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe----~~~~~di~s~G~~l~~~~~g~~p~~~~-------~  140 (188)
                      +++.+|++++.|||+++......      ..+|+..||+||    ....+|.||||++.+++++|..||...       .
T Consensus       129 lld~~Ghi~~tdfglske~v~~~------~~cgt~eymApEI~~gh~~a~D~ws~gvl~felltg~~pf~~~~~~~Il~~  202 (612)
T KOG0603|consen  129 LLLLEGHIKLTDFGLSKEAVKEK------IACGTYEYRAPEIINGHLSAADWWSFGVLAFELLTGTLPFGGDTMKRILKA  202 (612)
T ss_pred             eecccCccccCCchhhhHhHhhh------hcccchhhhhhHhhhccCCcccchhhhhhHHHHhhCCCCCchHHHHHHhhh
Confidence            99999999999999988643111      117899999999    467899999999999999999999761       1


Q ss_pred             CCCcCHHHHHHHHHHHHHccCcCCCCCCCH--HHHHHHH
Q 039565          141 KGEFDIISVEKAVEIAMASVSSKVNRRPLM--NQVVMVR  177 (188)
Q Consensus       141 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~--~~i~~~l  177 (188)
                      ....+......+.+++......+|.+|.-.  +.+.+..
T Consensus       203 ~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik  241 (612)
T KOG0603|consen  203 ELEMPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIK  241 (612)
T ss_pred             ccCCchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHh
Confidence            233556667778888888888899888743  3444433

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.60  E-value=1e-14  Score=112.04  Aligned_cols=167  Identities=26%  Similarity=0.361  Sum_probs=127.2

Q ss_pred             cccccCC-Ceeeeccc---CCccEEEEecCCCCChhhhc-CC-----cc---------cHHHHHHHHhcCCCCCcEEeCC
Q 039565            6 RNKLTGP-LLVELIGK---QKNNALELGFRGNPELVDQQ-GK-----EE---------VCCPGLEYLHQGLKHPIIQRDM   66 (188)
Q Consensus         6 l~~l~Hp-niv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~-----~~---------~i~~~l~~Lh~~~~~~i~h~dl   66 (188)
                      +.++.|+ +++++.+.   ....+++++++.++++..++ ..     ..         |++.++.|+|.   .+++|||+
T Consensus        51 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~---~~~~hrd~  127 (384)
T COG0515          51 LASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHS---KGIIHRDI  127 (384)
T ss_pred             HHHccCCcceeeEEEEEecCCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCC
Confidence            4567777 79999888   44469999999999999777 22     22         99999999999   89999999


Q ss_pred             CCCcEEEccCC-ceEEecccCcccccCCCCCc----ceeeecccccccCCC---------CCCccchHHHHHHHHHHHhC
Q 039565           67 KSTNILLNEKV-QAKLADFGQSRISPVEGGTH----MSTTIAGTAGFLNTE---------LTEKSDVDSFEIVILEIITG  132 (188)
Q Consensus        67 ~~~nill~~~~-~~kl~d~~~~~~~~~~~~~~----~~~~~~~~~~~~~pe---------~~~~~di~s~G~~l~~~~~g  132 (188)
                      ||+|++++..+ .+++.|||.+..........    ......|+..|++||         .....|+||+|++++++++|
T Consensus       128 kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~  207 (384)
T COG0515         128 KPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTG  207 (384)
T ss_pred             CHHHeeecCCCCeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhC
Confidence            99999999988 79999999987543222211    234567888888887         24578999999999999999


Q ss_pred             CccccccCCC----C---------cC-----HHH------HHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          133 ILTVDLSFKG----E---------FD-----IIS------VEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       133 ~~p~~~~~~~----~---------~~-----~~~------~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ..|+......    .         .+     ...      ...+.+++..|+..+|..|.+..+...
T Consensus       208 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~  274 (384)
T COG0515         208 LPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLS  274 (384)
T ss_pred             CCCCCCCCccccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhh
Confidence            9886544320    0         00     001      146788899999999999998776654

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.60  E-value=2.1e-16  Score=135.37  Aligned_cols=166  Identities=19%  Similarity=0.162  Sum_probs=121.1

Q ss_pred             cccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCcEE
Q 039565            8 KLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTNIL   72 (188)
Q Consensus         8 ~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~nil   72 (188)
                      ..+|||++.+.-+   ..-.|+|-+|..+ +|.+.+...+            |++.|+..+|.   .+|.|||||.+|||
T Consensus        77 l~~~pn~lPfqk~~~t~kAAylvRqyvkh-nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~---~gVcHGDIKsENIL  152 (1431)
T KOG1240|consen   77 LMKAPNCLPFQKVLVTDKAAYLVRQYVKH-NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHK---LGVCHGDIKSENIL  152 (1431)
T ss_pred             hhcCCcccchHHHHHhhHHHHHHHHHHhh-hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHH---cCccccccccceEE
Confidence            3578998888766   6667788888875 8999884444            99999999999   99999999999999


Q ss_pred             EccCCceEEecccCcccccCCCCCcce-----eeecccccccCCC-----------------CCCccchHHHHHHHHHHH
Q 039565           73 LNEKVQAKLADFGQSRISPVEGGTHMS-----TTIAGTAGFLNTE-----------------LTEKSDVDSFEIVILEII  130 (188)
Q Consensus        73 l~~~~~~kl~d~~~~~~~~~~~~~~~~-----~~~~~~~~~~~pe-----------------~~~~~di~s~G~~l~~~~  130 (188)
                      ++.=.++.|+||...+-.-.+......     .+...-.+|.|||                 .+++=||+|+||++.|++
T Consensus       153 iTSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf  232 (1431)
T KOG1240|consen  153 ITSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELF  232 (1431)
T ss_pred             EeeechhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHH
Confidence            999999999999876532111111000     0111112466666                 467789999999999997


Q ss_pred             -hCCcccccc------CCCCcCH------HHHHHHHHHHHHccCcCCCCCCCHHHHHHHH
Q 039565          131 -TGILTVDLS------FKGEFDI------ISVEKAVEIAMASVSSKVNRRPLMNQVVMVR  177 (188)
Q Consensus       131 -~g~~p~~~~------~~~~~~~------~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l  177 (188)
                       .|+++|+-.      .......      .+...+.+++..|++.||.+|-++++.++.-
T Consensus       233 ~Eg~PlF~LSQL~aYr~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~y  292 (1431)
T KOG1240|consen  233 LEGRPLFTLSQLLAYRSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQKY  292 (1431)
T ss_pred             hcCCCcccHHHHHhHhccCccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHhh
Confidence             568888531      1111111      2233678999999999999999999998763

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.58  E-value=7.4e-16  Score=114.24  Aligned_cols=113  Identities=15%  Similarity=0.190  Sum_probs=83.6

Q ss_pred             CcccccCCCeeeeccc-----------CCccEEEEecCCCCChhhhcCCc----ccHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            5 NRNKLTGPLLVELIGK-----------QKNNALELGFRGNPELVDQQGKE----EVCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~-----------~~~~~lv~e~~~~~~L~~~~~~~----~~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      .+.+++||+|..+..+           ....+++|||++|.+|.++....    .+++.++..+|+   .+++|||++|.
T Consensus        88 ~l~rL~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~~~~~~~~~i~~~l~~lH~---~gi~H~Dikp~  164 (232)
T PRK10359         88 QTDRVRSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPEISEDVKAKIKASIESLHQ---HGMVSGDPHKG  164 (232)
T ss_pred             HHHHHHHCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhhccHHHHHHHHHHHHHHHH---cCCccCCCChH
Confidence            3577889998888766           13578999999999998876221    199999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCCCCCccchHHHHHHHHHH
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILEI  129 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~di~s~G~~l~~~  129 (188)
                      |++++.++ +++.|||..........   ...     ..+-..+..++|+||||+++.-.
T Consensus       165 Nili~~~g-i~liDfg~~~~~~e~~a---~d~-----~vler~y~~~~di~~lg~~~~~~  215 (232)
T PRK10359        165 NFIVSKNG-LRIIDLSGKRCTAQRKA---KDR-----IDLERHYGIKNEIKDLGYYLLIY  215 (232)
T ss_pred             HEEEeCCC-EEEEECCCcccccchhh---HHH-----HHHHhHhcccccccceeEeehHH
Confidence            99999888 99999997764321111   110     00111145689999999986643

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.56  E-value=7.2e-16  Score=123.29  Aligned_cols=144  Identities=19%  Similarity=0.273  Sum_probs=107.3

Q ss_pred             CccEEEEecCCCCChhhhc-CCcc--------------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEccCCceEEecccC
Q 039565           22 KNNALELGFRGNPELVDQQ-GKEE--------------VCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQ   86 (188)
Q Consensus        22 ~~~~lv~e~~~~~~L~~~~-~~~~--------------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~   86 (188)
                      ..+++.|++|...+|.+|+ ++..              |++.|++|      ++.+|+|+||.||+...+..+||.|||+
T Consensus       329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFgl  402 (516)
T KOG1033|consen  329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFGL  402 (516)
T ss_pred             cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhhh
Confidence            4688999999999999999 3332              77777777      6889999999999999999999999998


Q ss_pred             cccccCCC----CCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccc------cccCCCCcCHH--
Q 039565           87 SRISPVEG----GTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTV------DLSFKGEFDII--  147 (188)
Q Consensus        87 ~~~~~~~~----~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~------~~~~~~~~~~~--  147 (188)
                      ........    .........|+..||+||      ++.++||||+|++++|++. -...+      .....+.+++.  
T Consensus       403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~t~~d~r~g~ip~~~~  482 (516)
T KOG1033|consen  403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIATLTDIRDGIIPPEFL  482 (516)
T ss_pred             eeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHHhhhhhhcCCCChHHh
Confidence            76543222    112334578999999999      7999999999999999987 22222      22222223321  


Q ss_pred             -HHHHHHHHHHHccCcCCCCCCCHH
Q 039565          148 -SVEKAVEIAMASVSSKVNRRPLMN  171 (188)
Q Consensus       148 -~~~~~~~l~~~cl~~~p~~Rps~~  171 (188)
                       .-..-..++.+++...|.+||++.
T Consensus       483 ~d~p~e~~ll~~lls~~p~~RP~~~  507 (516)
T KOG1033|consen  483 QDYPEEYTLLQQLLSPSPEERPSAI  507 (516)
T ss_pred             hcCcHHHHHHHHhcCCCcccCchHH
Confidence             112345889999999999999543

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.55  E-value=9e-15  Score=106.71  Aligned_cols=127  Identities=13%  Similarity=0.083  Sum_probs=92.7

Q ss_pred             ccccc-CCCeeeecccCCccEEEEecCCCCChhhhcCCcc-----cHHHHHHHHhcCCCCCcEEeCC-CCCcEEEccCCc
Q 039565            6 RNKLT-GPLLVELIGKQKNNALELGFRGNPELVDQQGKEE-----VCCPGLEYLHQGLKHPIIQRDM-KSTNILLNEKVQ   78 (188)
Q Consensus         6 l~~l~-Hpniv~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-----~i~~~l~~Lh~~~~~~i~h~dl-~~~nill~~~~~   78 (188)
                      |.++. |+++++++++ +..+++|||+.+.+|........     |++.++.++|+   .+|+|+|+ ||.||+++.++.
T Consensus        55 L~~L~~~~~vP~ll~~-~~~~lvmeyI~G~~L~~~~~~~~~~~~~qi~~~L~~lH~---~GIvHrDL~kp~NILv~~~g~  130 (218)
T PRK12274         55 LRQLDGLPRTPRLLHW-DGRHLDRSYLAGAAMYQRPPRGDLAYFRAARRLLQQLHR---CGVAHNDLAKEANWLVQEDGS  130 (218)
T ss_pred             HHhcCCCCCCCEEEEE-cCEEEEEeeecCccHHhhhhhhhHHHHHHHHHHHHHHHH---CcCccCCCCCcceEEEcCCCC
Confidence            45664 4778888887 34699999999999977652212     88999999999   99999999 799999999999


Q ss_pred             eEEecccCcccccCCCCCc----c----e----eeecccccccCCC-------CC-CccchHHHHHHHHHHHhCCcccc
Q 039565           79 AKLADFGQSRISPVEGGTH----M----S----TTIAGTAGFLNTE-------LT-EKSDVDSFEIVILEIITGILTVD  137 (188)
Q Consensus        79 ~kl~d~~~~~~~~~~~~~~----~----~----~~~~~~~~~~~pe-------~~-~~~di~s~G~~l~~~~~g~~p~~  137 (188)
                      ++|+|||++.... .....    .    .    .-...++.+++|+       .+ .+.+.++-|.-+|.++|+..+.-
T Consensus       131 i~LIDFG~A~~~~-~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~  208 (218)
T PRK12274        131 PAVIDFQLAVRGN-PRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHW  208 (218)
T ss_pred             EEEEECCCceecC-CcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcc
Confidence            9999999998543 22210    0    0    0122455666665       22 34455577999999999987653

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.54  E-value=6.1e-15  Score=112.51  Aligned_cols=135  Identities=19%  Similarity=0.140  Sum_probs=88.2

Q ss_pred             ccEEEEecCCCCChhhhc------CCcc-------------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEccCCceEEec
Q 039565           23 NNALELGFRGNPELVDQQ------GKEE-------------VCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLAD   83 (188)
Q Consensus        23 ~~~lv~e~~~~~~L~~~~------~~~~-------------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~~~kl~d   83 (188)
                      +.+++|.-+. ++|..++      .+..             |+...+++||+   .|++|+|++|+|++++.+|.+.|+|
T Consensus       113 n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~---~GlVHgdi~~~nfll~~~G~v~Lg~  188 (288)
T PF14531_consen  113 NRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHS---YGLVHGDIKPENFLLDQDGGVFLGD  188 (288)
T ss_dssp             SEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTEEEST-SGGGEEE-TTS-EEE--
T ss_pred             hhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhh---cceEecccceeeEEEcCCCCEEEcC
Confidence            3456666665 6887775      1111             88899999999   9999999999999999999999999


Q ss_pred             ccCcccccCCCCCcceeeecccccccCCC--------------CCCccchHHHHHHHHHHHhCCccccccCC--------
Q 039565           84 FGQSRISPVEGGTHMSTTIAGTAGFLNTE--------------LTEKSDVDSFEIVILEIITGILTVDLSFK--------  141 (188)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pe--------------~~~~~di~s~G~~l~~~~~g~~p~~~~~~--------  141 (188)
                      |+......   .. ... ...+..+.+||              ++.+.|.|++|+++|.+.++..||+....        
T Consensus       189 F~~~~r~g---~~-~~~-~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~~f  263 (288)
T PF14531_consen  189 FSSLVRAG---TR-YRC-SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEWDF  263 (288)
T ss_dssp             GGGEEETT---EE-EEG-GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGGGG
T ss_pred             hHHHeecC---ce-eec-cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccccc
Confidence            97654321   11 111 12223444454              46778999999999999999999974322        


Q ss_pred             CCcCHHHHHHHHHHHHHccCcCCCCC
Q 039565          142 GEFDIISVEKAVEIAMASVSSKVNRR  167 (188)
Q Consensus       142 ~~~~~~~~~~~~~l~~~cl~~~p~~R  167 (188)
                      .... ..++.+..++...|+.+|.+|
T Consensus       264 ~~C~-~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  264 SRCR-DMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             TTSS----HHHHHHHHHHT-SSGGGS
T ss_pred             hhcC-CcCHHHHHHHHHHccCCcccC
Confidence            2233 788999999999999999987

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.49  E-value=3e-13  Score=106.06  Aligned_cols=167  Identities=20%  Similarity=0.270  Sum_probs=118.8

Q ss_pred             CCeeeeccc----CCccEEEEecCCCCChhhhc-CCc-c------------cHHHHHHHHhcCCCCCcEEeCCCCCcEEE
Q 039565           12 PLLVELIGK----QKNNALELGFRGNPELVDQQ-GKE-E------------VCCPGLEYLHQGLKHPIIQRDMKSTNILL   73 (188)
Q Consensus        12 pniv~~~~~----~~~~~lv~e~~~~~~L~~~~-~~~-~------------~i~~~l~~Lh~~~~~~i~h~dl~~~nill   73 (188)
                      +++.++++.    ....++||+.+. .+|.++. ... .            |++.+|+++|+   .|++|||+||.|+++
T Consensus        80 ~~~~~~~~~G~~~~~~~~iVM~l~G-~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~---~G~iHRDiKp~N~~~  155 (322)
T KOG1164|consen   80 SHFPKLLDHGRSTEDFNFIVMSLLG-PSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHS---KGFIHRDIKPENFVV  155 (322)
T ss_pred             CCCCEEEEeccCCCceeEEEEeccC-ccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHh---cCcccCCcCHHHeee
Confidence            355666555    446789988886 5999977 222 1            99999999999   999999999999999


Q ss_pred             ccC-----CceEEecccCcc--cccCCCCC---cc---eeeecccccccCCC------CCCccchHHHHHHHHHHHhCCc
Q 039565           74 NEK-----VQAKLADFGQSR--ISPVEGGT---HM---STTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGIL  134 (188)
Q Consensus        74 ~~~-----~~~kl~d~~~~~--~~~~~~~~---~~---~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~  134 (188)
                      +..     ..+.+.|||+++  .+......   ..   ...+.||..|.++.      .+.+.|+||++.++.++..|.+
T Consensus       156 g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~L  235 (322)
T KOG1164|consen  156 GQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSL  235 (322)
T ss_pred             cCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCC
Confidence            865     358999999998  32211111   11   22356888888765      6899999999999999999999


Q ss_pred             cccccCCCC----------------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          135 TVDLSFKGE----------------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       135 p~~~~~~~~----------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                      ||.......                .....+..+.++...+-..+...+|....+...|++...
T Consensus       236 PW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~  299 (322)
T KOG1164|consen  236 PWEALEMTDLKSKFEKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFD  299 (322)
T ss_pred             CCccccccchHHHHHHHhhhhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHH
Confidence            984322110                001123455566666666888899998888887765543

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.48  E-value=2.1e-14  Score=122.78  Aligned_cols=121  Identities=22%  Similarity=0.285  Sum_probs=97.1

Q ss_pred             cHHHHHHHHhcCCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCC------------C-CCcceeeecccccccCC
Q 039565           45 VCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVE------------G-GTHMSTTIAGTAGFLNT  111 (188)
Q Consensus        45 ~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~------------~-~~~~~~~~~~~~~~~~p  111 (188)
                      +++.|++|+|+   .+|+|||+||+|.+++.-|+.|+.|||+++.....            . ..-.....+|++.|.+|
T Consensus       151 dmvla~Eylh~---ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaP  227 (1205)
T KOG0606|consen  151 DMVLAVEYLHS---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAP  227 (1205)
T ss_pred             hhhHHhHhhcc---CCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccCh
Confidence            88899999999   99999999999999999999999999998742100            0 00112346899999999


Q ss_pred             C------CCCccchHHHHHHHHHHHhCCccccccCC--------------CCcCHHHHHHHHHHHHHccCcCCCCCC
Q 039565          112 E------LTEKSDVDSFEIVILEIITGILTVDLSFK--------------GEFDIISVEKAVEIAMASVSSKVNRRP  168 (188)
Q Consensus       112 e------~~~~~di~s~G~~l~~~~~g~~p~~~~~~--------------~~~~~~~~~~~~~l~~~cl~~~p~~Rp  168 (188)
                      |      |...+|.|++|+++|+.+.|..||....+              .|-+.....+..+++.+.++.+|..|-
T Consensus       228 eVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rl  304 (1205)
T KOG0606|consen  228 EVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRL  304 (1205)
T ss_pred             hhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhc
Confidence            9      78899999999999999999999865522              223444566788888899999998886

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.43  E-value=2.5e-14  Score=109.13  Aligned_cols=173  Identities=17%  Similarity=0.196  Sum_probs=117.5

Q ss_pred             CCCCcccccCCCeeeeccc--------CCccEEEEecCCCCChhhhcCC---cc-------------cHHHHHHHHhcCC
Q 039565            2 YFPNRNKLTGPLLVELIGK--------QKNNALELGFRGNPELVDQQGK---EE-------------VCCPGLEYLHQGL   57 (188)
Q Consensus         2 ~~~~l~~l~Hpniv~~~~~--------~~~~~lv~e~~~~~~L~~~~~~---~~-------------~i~~~l~~Lh~~~   57 (188)
                      .|.++-.+.|.|+|++..+        .....++.||+..|++..++++   ..             |+..||.|||+ +
T Consensus       117 vFdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~  195 (458)
T KOG1266|consen  117 VFDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-C  195 (458)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-c
Confidence            3667788899999999888        3345799999999999999922   22             99999999996 4


Q ss_pred             CCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCC--CcceeeecccccccCCC------CCCccchHHHHHHHHHH
Q 039565           58 KHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGG--THMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEI  129 (188)
Q Consensus        58 ~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~  129 (188)
                      ...++|+++.-..+++..+|.+|+..-.-.........  ........+.++|.+|+      .+..+|||+||.+..+|
T Consensus       196 ~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlem  275 (458)
T KOG1266|consen  196 DPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEM  275 (458)
T ss_pred             CCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHH
Confidence            57899999999999999999888753221111100000  01111234556777777      35679999999999998


Q ss_pred             HhCCccc-cccCCCCcCHHHH--------HHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          130 ITGILTV-DLSFKGEFDIISV--------EKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       130 ~~g~~p~-~~~~~~~~~~~~~--------~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ..+..-- .....-+......        ..-...+..|++-.|+.||+|.+++.
T Consensus       276 ailEiq~tnseS~~~~ee~ia~~i~~len~lqr~~i~kcl~~eP~~rp~ar~llf  330 (458)
T KOG1266|consen  276 AILEIQSTNSESKVEVEENIANVIIGLENGLQRGSITKCLEGEPNGRPDARLLLF  330 (458)
T ss_pred             HHheeccCCCcceeehhhhhhhheeeccCccccCcCcccccCCCCCCcchhhhhc
Confidence            7765321 1111101000000        01235677899999999999998764

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.40  E-value=4.8e-14  Score=118.19  Aligned_cols=162  Identities=22%  Similarity=0.301  Sum_probs=129.2

Q ss_pred             CCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-------------cHHHHHHHHh-cCCCCCcEEeCCCCCcEE
Q 039565           11 GPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-------------VCCPGLEYLH-QGLKHPIIQRDMKSTNIL   72 (188)
Q Consensus        11 Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-------------~i~~~l~~Lh-~~~~~~i~h~dl~~~nil   72 (188)
                      |+|++++++.   .+..+++++|.+++++.+.+ ....             |+..++.|+| .   .++.|+|++|+|.+
T Consensus        80 h~n~~~~~~~~~~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~---~~~~h~~ikP~n~~  156 (601)
T KOG0590|consen   80 HSNTVHMIEPSSSPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPE---NGVTHRDIKPSNSL  156 (601)
T ss_pred             cccccccCCccCCCcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcc---cccccCCCCCccch
Confidence            9999999999   88899999999999988887 3321             9999999999 7   99999999999999


Q ss_pred             EccCC-ceEEecccCcccccC-CCCCcceeeecc-cccccCCCC-------CCccchHHHHHHHHHHHhCCccccccCCC
Q 039565           73 LNEKV-QAKLADFGQSRISPV-EGGTHMSTTIAG-TAGFLNTEL-------TEKSDVDSFEIVILEIITGILTVDLSFKG  142 (188)
Q Consensus        73 l~~~~-~~kl~d~~~~~~~~~-~~~~~~~~~~~~-~~~~~~pe~-------~~~~di~s~G~~l~~~~~g~~p~~~~~~~  142 (188)
                      ++.++ ..+.+|||++..+.. .+.........| ++.|.+||.       .+..|+||.|+++..+++|..|++.....
T Consensus       157 l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~  236 (601)
T KOG0590|consen  157 LDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRK  236 (601)
T ss_pred             hccCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccc
Confidence            99999 999999999987654 333334445677 889999993       56789999999999999999887543221


Q ss_pred             C----------------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          143 E----------------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       143 ~----------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      .                .-........++...++..+|..|.+.+++..
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~  285 (601)
T KOG0590|consen  237 DGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKL  285 (601)
T ss_pred             cccceeecccccccccCccccCChhhhhcccccccCCchhccccccccc
Confidence            1                11123445667788888899999999877643

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.40  E-value=2.2e-13  Score=99.07  Aligned_cols=80  Identities=15%  Similarity=0.146  Sum_probs=58.8

Q ss_pred             cccccCCCeeeeccc-CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHH-hcCCCCCcEEeCCCCCcE
Q 039565            6 RNKLTGPLLVELIGK-QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYL-HQGLKHPIIQRDMKSTNI   71 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~L-h~~~~~~i~h~dl~~~ni   71 (188)
                      +.++.++++.....+ ....++||||++++++.... ....           |++.+|.++ |+   .+++|||+||.||
T Consensus        73 l~~l~~~~v~~p~~~~~~~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~---~giiHrDlkP~NI  149 (190)
T cd05147          73 LKRLVTAGIPCPEPILLKSHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQD---CRLVHADLSEYNL  149 (190)
T ss_pred             HHHHHHCCCCCCcEEEecCCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHE
Confidence            444555554332222 23458999999987775543 2211           899999999 67   8999999999999


Q ss_pred             EEccCCceEEecccCccc
Q 039565           72 LLNEKVQAKLADFGQSRI   89 (188)
Q Consensus        72 ll~~~~~~kl~d~~~~~~   89 (188)
                      +++ ++.++++|||++..
T Consensus       150 li~-~~~v~LiDFG~a~~  166 (190)
T cd05147         150 LYH-DGKLYIIDVSQSVE  166 (190)
T ss_pred             EEE-CCcEEEEEcccccc
Confidence            998 47899999999874

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PRK10345 hypothetical protein; Provisional

Probab=99.39  E-value=5.6e-13  Score=98.16  Aligned_cols=75  Identities=17%  Similarity=0.172  Sum_probs=59.0

Q ss_pred             cCCCeeeeccc--CC----c-cEEEEec--CCCCChhhhcCCcc---------cHHHHH-HHHhcCCCCCcEEeCCCCCc
Q 039565           10 TGPLLVELIGK--QK----N-NALELGF--RGNPELVDQQGKEE---------VCCPGL-EYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus        10 ~Hpniv~~~~~--~~----~-~~lv~e~--~~~~~L~~~~~~~~---------~i~~~l-~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +||||++++|+  .+    . ..+|+||  +.+++|.+++.+..         +++.++ +|||+   .+|+|||+||+|
T Consensus        59 ~h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~~~~~e~~~~~~~~L~~l~~yLh~---~~IvhrDlKp~N  135 (210)
T PRK10345         59 DWSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQCRYEEDVAQLRQLLKKLKRYLLD---NRIVTMELKPQN  135 (210)
T ss_pred             CCcccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHcccccHhHHHHHHHHHHHHHHHHH---CCEeecCCCHHH
Confidence            68999999999  22    2 2378999  55789999993221         666666 89999   999999999999


Q ss_pred             EEEcc----CCceEEecccCc
Q 039565           71 ILLNE----KVQAKLADFGQS   87 (188)
Q Consensus        71 ill~~----~~~~kl~d~~~~   87 (188)
                      |+++.    ++.++|+|++.+
T Consensus       136 ILl~~~~~~~~~~~LiDg~G~  156 (210)
T PRK10345        136 ILCQRISESEVIPVVCDNIGE  156 (210)
T ss_pred             EEEeccCCCCCcEEEEECCCC
Confidence            99974    347999995544

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=99.38  E-value=1.3e-12  Score=107.61  Aligned_cols=125  Identities=13%  Similarity=0.114  Sum_probs=93.1

Q ss_pred             CCCcccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            3 FPNRNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         3 ~~~l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+|+.++||||++++..   ....|+|+|-+.  .|..++++.+         |++.||.|||+.  .+++|+++....
T Consensus        60 ~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l~~~~v~~Gl~qIl~AL~FL~~d--~~lvHgNv~~~S  135 (690)
T KOG1243|consen   60 VKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKELGKEEVCLGLFQILAALSFLNDD--CNLVHGNVCKDS  135 (690)
T ss_pred             HHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHhHHHHHHHHHHHHHHHHHHHhcc--CCeeeccEeeee
Confidence            357899999999999998   778899999986  5777774443         999999999962  899999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCCCCC----ccchHHHHHHHHHHHhCC
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTELTE----KSDVDSFEIVILEIITGI  133 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~----~~di~s~G~~l~~~~~g~  133 (188)
                      ++++..|.+||++|...........  ......--..+..|+.-.    ..|.|.||+++++++.|.
T Consensus       136 VfVn~~GeWkLggle~v~~~~~~~~--~~~~~~~~~s~~~P~~~~~s~~s~D~~~Lg~li~el~ng~  200 (690)
T KOG1243|consen  136 VFVNESGEWKLGGLELVSKASGFNA--PAKSLYLIESFDDPEEIDPSEWSIDSWGLGCLIEELFNGS  200 (690)
T ss_pred             EEEcCCCcEEEeeeEEEeccccCCc--ccccchhhhcccChhhcCccccchhhhhHHHHHHHHhCcc
Confidence            9999999999999987643221110  011111112234444222    369999999999999993

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.36  E-value=5.9e-13  Score=96.82  Aligned_cols=83  Identities=19%  Similarity=0.147  Sum_probs=61.8

Q ss_pred             CcccccCCCeeeeccc-CCccEEEEecCCCCChhhh-cCC--cc---------cHHHHHHHHhcCCCCCcEEeCCCCCcE
Q 039565            5 NRNKLTGPLLVELIGK-QKNNALELGFRGNPELVDQ-QGK--EE---------VCCPGLEYLHQGLKHPIIQRDMKSTNI   71 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~-~~~~~lv~e~~~~~~L~~~-~~~--~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~ni   71 (188)
                      .+.++.|+++.....+ ....++||||++++++... +..  ..         |++.++.++|+  ..+++|+|+||.||
T Consensus        72 ~l~~l~~~~i~~p~~~~~~~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~--~~givHrDlkP~NI  149 (190)
T cd05145          72 NLKRLYEAGVPVPEPILLKKNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQ--EAGLVHGDLSEYNI  149 (190)
T ss_pred             HHHHHHhCCCCCceEEEecCCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHH--hCCEecCCCChhhE
Confidence            3556667776433333 2345899999998754433 321  11         99999999997  27999999999999


Q ss_pred             EEccCCceEEecccCcccc
Q 039565           72 LLNEKVQAKLADFGQSRIS   90 (188)
Q Consensus        72 ll~~~~~~kl~d~~~~~~~   90 (188)
                      +++ ++.++++|||++...
T Consensus       150 ll~-~~~~~liDFG~a~~~  167 (190)
T cd05145         150 LYH-DGKPYIIDVSQAVEL  167 (190)
T ss_pred             EEE-CCCEEEEEcccceec
Confidence            999 789999999998754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.31  E-value=1.4e-11  Score=106.72  Aligned_cols=156  Identities=20%  Similarity=0.141  Sum_probs=106.1

Q ss_pred             CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEcc-------CCceEE
Q 039565           21 QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTNILLNE-------KVQAKL   81 (188)
Q Consensus        21 ~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~-------~~~~kl   81 (188)
                      .+..+|++||.+.|+|.+++....            |++.-++.||.   .+|||+||||+|.++..       +..++|
T Consensus       766 ~~~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~---~~IIHgDiKPDNfll~~~~~~~~~~~~l~l  842 (974)
T KOG1166|consen  766 QNASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHA---MGIIHGDIKPDNFLLRREICADSDSKGLYL  842 (974)
T ss_pred             CCcceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHh---cceecccCCcceeEeecccCCCCcccceEE
Confidence            788899999999999999994322            99999999999   99999999999999953       346899


Q ss_pred             ecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCcc-c-ccc-------CCCCcCH
Q 039565           82 ADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILT-V-DLS-------FKGEFDI  146 (188)
Q Consensus        82 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p-~-~~~-------~~~~~~~  146 (188)
                      +|||.+.-+..-.....-....++-.+-.+|      ++-..|.|.+..+++-|+-|+.. + +..       ++..+..
T Consensus       843 IDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q~~~g~~~~~~~~~~Ry~~~  922 (974)
T KOG1166|consen  843 IDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYMEVKNGSSWMVKTNFPRYWKR  922 (974)
T ss_pred             EecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHHhcCCcceeccccchhhhhH
Confidence            9999886433221111222223333333333      68899999999999999998731 1 111       1122222


Q ss_pred             HHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          147 ISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       147 ~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                      +.-.++++   ..|+.+-..=|...+|...|++...
T Consensus       923 ~~W~~~F~---~lLN~~~~~~p~l~~lr~~~~~~~~  955 (974)
T KOG1166|consen  923 DMWNKFFD---LLLNPDCDTLPNLQELRTELEEVLA  955 (974)
T ss_pred             HHHHHHHH---HHhCcCcccchhHHHHHHHHHHHHH
Confidence            33334444   4555666666777788777776543

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.26  E-value=2.2e-11  Score=93.27  Aligned_cols=124  Identities=21%  Similarity=0.326  Sum_probs=97.1

Q ss_pred             CCCeeeeccc---CCccEEEEecCCCCChhhhc----CCcc---------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEc
Q 039565           11 GPLLVELIGK---QKNNALELGFRGNPELVDQQ----GKEE---------VCCPGLEYLHQGLKHPIIQRDMKSTNILLN   74 (188)
Q Consensus        11 Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~----~~~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~   74 (188)
                      -+.|.+.+-+   +.+..||+|... .+|++..    ++..         |+..-++|+|+   +..|+||+||+|.||.
T Consensus        83 ~~GIP~vYYFGqeG~~NiLVidLLG-PSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~---k~LIYRDIKPdNFLIG  158 (449)
T KOG1165|consen   83 TEGIPQVYYFGQEGKYNILVIDLLG-PSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHE---KDLIYRDIKPDNFLIG  158 (449)
T ss_pred             CCCCCceeeeccccchhhhhhhhhC-cCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHh---cceeecccCccceeec
Confidence            3556666555   677789999986 4777766    3333         99999999999   9999999999999998


Q ss_pred             cCC-----ceEEecccCcccccCCCCCc-----ceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccc
Q 039565           75 EKV-----QAKLADFGQSRISPVEGGTH-----MSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        75 ~~~-----~~kl~d~~~~~~~~~~~~~~-----~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      ..+     .+.++|||+++.+..+....     ......||..||+-.      -+.+.|.=|+|-++...+.|.+||..
T Consensus       159 rp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQG  238 (449)
T KOG1165|consen  159 RPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQG  238 (449)
T ss_pred             CCCCCCCceEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccc
Confidence            654     47899999999776443321     223568999998754      68899999999999999999999954

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.25  E-value=5.5e-12  Score=105.27  Aligned_cols=80  Identities=16%  Similarity=0.237  Sum_probs=67.9

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-cc---cHHHHHHHHhcCCCCCcEEeCCCCCcEEEccCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-EE---VCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQ   78 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~~---~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~~   78 (188)
                      +.+++|++++....+   ....+++|||+++++|.+++.. ..   +++.+|.+||+   .+++|||+||.||++ .++.
T Consensus       390 l~~l~~~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~~~~~~~~~i~~~L~~lH~---~giiHrDlkp~NILl-~~~~  465 (535)
T PRK09605        390 LSEARRAGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLEGNPELVRKVGEIVAKLHK---AGIVHGDLTTSNFIV-RDDR  465 (535)
T ss_pred             HHhhcccCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHHHHHHHHHHHHHHHHHHHh---CCCccCCCChHHEEE-ECCc
Confidence            456789998765444   6678999999999999998832 22   99999999999   999999999999999 6778


Q ss_pred             eEEecccCccc
Q 039565           79 AKLADFGQSRI   89 (188)
Q Consensus        79 ~kl~d~~~~~~   89 (188)
                      ++++|||+++.
T Consensus       466 ~~liDFGla~~  476 (535)
T PRK09605        466 LYLIDFGLGKY  476 (535)
T ss_pred             EEEEeCccccc
Confidence            99999999874

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.24  E-value=1.3e-11  Score=92.85  Aligned_cols=81  Identities=17%  Similarity=0.184  Sum_probs=64.9

Q ss_pred             cccccCCCe--eeeccc----CC---ccEEEEecCCC-CChhhhcCCcc-------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLL--VELIGK----QK---NNALELGFRGN-PELVDQQGKEE-------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpni--v~~~~~----~~---~~~lv~e~~~~-~~L~~~~~~~~-------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +.+++|++|  ++.++.    ..   ..++|+|++++ .+|.+++....       +++.++.+||+   .+|+|+|+||
T Consensus        94 l~~L~~~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~~l~~~~~~~i~~~l~~lH~---~GI~HrDlkp  170 (239)
T PRK01723         94 LAQLYEAGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALLQEAPLSEEQWQAIGQLIARFHD---AGVYHADLNA  170 (239)
T ss_pred             HHHHHhCCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHH---CCCCCCCCCc
Confidence            456777774  555554    11   23599999997 68988873322       89999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCccc
Q 039565           69 TNILLNEKVQAKLADFGQSRI   89 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~   89 (188)
                      .||+++.++.++++|||.+..
T Consensus       171 ~NILv~~~~~v~LIDfg~~~~  191 (239)
T PRK01723        171 HNILLDPDGKFWLIDFDRGEL  191 (239)
T ss_pred             hhEEEcCCCCEEEEECCCccc
Confidence            999999988999999998775

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.21  E-value=2e-11  Score=89.84  Aligned_cols=80  Identities=19%  Similarity=0.178  Sum_probs=65.6

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-c----c---cHHHHHHHHhcCCCCCcEEeCCCCCcEEEc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-E----E---VCCPGLEYLHQGLKHPIIQRDMKSTNILLN   74 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~----~---~i~~~l~~Lh~~~~~~i~h~dl~~~nill~   74 (188)
                      +.++.|+++.....+   ....+++|||+++++|.+++.. .    .   +++.+|.++|+   .+++|+|++|.||+++
T Consensus        53 l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~Dl~p~Nil~~  129 (211)
T PRK14879         53 MSRARKAGVNVPAVYFVDPENFIIVMEYIEGEPLKDLINSNGMEELELSREIGRLVGKLHS---AGIIHGDLTTSNMILS  129 (211)
T ss_pred             HHHHHHCCCCCCeEEEEeCCCCEEEEEEeCCcCHHHHHHhccHHHHHHHHHHHHHHHHHHh---CCcccCCCCcccEEEE
Confidence            345667776544333   6778999999999999999822 1    1   89999999999   9999999999999999


Q ss_pred             cCCceEEecccCccc
Q 039565           75 EKVQAKLADFGQSRI   89 (188)
Q Consensus        75 ~~~~~kl~d~~~~~~   89 (188)
                       ++.++++|||.+..
T Consensus       130 -~~~~~liDf~~a~~  143 (211)
T PRK14879        130 -GGKIYLIDFGLAEF  143 (211)
T ss_pred             -CCCEEEEECCcccC
Confidence             78899999998764

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.20  E-value=2.4e-11  Score=88.70  Aligned_cols=79  Identities=18%  Similarity=0.231  Sum_probs=64.9

Q ss_pred             ccccCCC--eeeeccc-CCccEEEEecCCCCChhhhcCCc--c---cHHHHHHHHhcCCCCCcEEeCCCCCcEEEccCCc
Q 039565            7 NKLTGPL--LVELIGK-QKNNALELGFRGNPELVDQQGKE--E---VCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQ   78 (188)
Q Consensus         7 ~~l~Hpn--iv~~~~~-~~~~~lv~e~~~~~~L~~~~~~~--~---~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~~   78 (188)
                      .+++|++  ++.++.. ....+++|||+++++|.+++...  .   +++.+|.++|+   .+++|+|++|.|++++ ++.
T Consensus        52 ~~l~~~~i~~p~~~~~~~~~~~lv~e~~~g~~l~~~~~~~~~~~~~~i~~~l~~lH~---~gi~H~Dl~~~Nil~~-~~~  127 (199)
T TIGR03724        52 SRARKAGVNTPVVYDVDPDNKTIVMEYIEGKPLKDVIEEGNDELLREIGRLVGKLHK---AGIVHGDLTTSNIIVR-DDK  127 (199)
T ss_pred             HHHHHCCCCCCEEEEEECCCCEEEEEEECCccHHHHHhhcHHHHHHHHHHHHHHHHH---CCeecCCCCcceEEEE-CCc
Confidence            3456665  3444445 67779999999999999988332  2   99999999999   9999999999999999 789


Q ss_pred             eEEecccCccc
Q 039565           79 AKLADFGQSRI   89 (188)
Q Consensus        79 ~kl~d~~~~~~   89 (188)
                      +++.|||.+..
T Consensus       128 ~~liDfg~a~~  138 (199)
T TIGR03724       128 LYLIDFGLGKY  138 (199)
T ss_pred             EEEEECCCCcC
Confidence            99999998764

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.18  E-value=4e-11  Score=88.30  Aligned_cols=152  Identities=20%  Similarity=0.199  Sum_probs=108.3

Q ss_pred             CCccEEEEecCCCCChhhhcCC----cc---------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEccC---CceEEecc
Q 039565           21 QKNNALELGFRGNPELVDQQGK----EE---------VCCPGLEYLHQGLKHPIIQRDMKSTNILLNEK---VQAKLADF   84 (188)
Q Consensus        21 ~~~~~lv~e~~~~~~L~~~~~~----~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~---~~~kl~d~   84 (188)
                      .....+||+... .+|++....    ..         |++.-++|+|.   ++.+|||+||+|.+..-+   ..+-+.||
T Consensus        83 ~~ynvlVMdLLG-PsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~---r~fiHRDIKPdNFLMGlgrh~~kl~LIDF  158 (341)
T KOG1163|consen   83 KDYNVLVMDLLG-PSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHL---RNFIHRDIKPDNFLMGLGRHCNKLYLIDF  158 (341)
T ss_pred             cccceeeeeccC-ccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHh---hccccccCCccceeeccccccceEEEEec
Confidence            566789999986 588887722    22         99999999999   999999999999999765   35679999


Q ss_pred             cCcccccCCCCC-----cceeeecccccccCC------CCCCccchHHHHHHHHHHHhCCccccccCCCC----------
Q 039565           85 GQSRISPVEGGT-----HMSTTIAGTAGFLNT------ELTEKSDVDSFEIVILEIITGILTVDLSFKGE----------  143 (188)
Q Consensus        85 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~p------e~~~~~di~s~G~~l~~~~~g~~p~~~~~~~~----------  143 (188)
                      |+++.+....+.     ......+||..|.+-      |.+.+.|+=|+|.++.....|.+||..-....          
T Consensus       159 GLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~E  238 (341)
T KOG1163|consen  159 GLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISE  238 (341)
T ss_pred             cchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHH
Confidence            999876432221     122346777777653      36889999999999999999999996533221          


Q ss_pred             ----cCH-----HHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          144 ----FDI-----ISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       144 ----~~~-----~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                          .+.     ..+.++.-.+.-|-...=++-|...-+-+.
T Consensus       239 kK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrql  280 (341)
T KOG1163|consen  239 KKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQL  280 (341)
T ss_pred             hhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHH
Confidence                111     123356667777877777777775444443

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.15  E-value=7.1e-11  Score=86.36  Aligned_cols=67  Identities=18%  Similarity=0.222  Sum_probs=57.6

Q ss_pred             CCccEEEEecCCCCChhhhcC-Ccc-----cHHHHHHHHhcCCCCCcEEeCCCCCcEEEccCCceEEecccCcccc
Q 039565           21 QKNNALELGFRGNPELVDQQG-KEE-----VCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRIS   90 (188)
Q Consensus        21 ~~~~~lv~e~~~~~~L~~~~~-~~~-----~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~   90 (188)
                      ....+++|||+++++|..... ...     +++.++.++|+   .+++|+|++|.||+++.++.++++|||.+...
T Consensus       103 ~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~i~~~l~~lh~---~gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~  175 (198)
T cd05144         103 WNRHAVVMEYIDGVELYRVRVLEDPEEVLDEILEEIVKAYK---HGIIHGDLSEFNILVDDDEKIYIIDWPQMVST  175 (198)
T ss_pred             cCCceEEEEEeCCcchhhccccccHHHHHHHHHHHHHHHHH---CCCCcCCCCcccEEEcCCCcEEEEECCccccC
Confidence            345689999999999887764 211     99999999999   99999999999999999999999999988644

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>smart00090 RIO RIO-like kinase

Probab=99.11  E-value=8.7e-11  Score=88.28  Aligned_cols=64  Identities=22%  Similarity=0.253  Sum_probs=54.4

Q ss_pred             ccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCC-cEEeCCCCCcEEEccCCceEEecccCccc
Q 039565           23 NNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHP-IIQRDMKSTNILLNEKVQAKLADFGQSRI   89 (188)
Q Consensus        23 ~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~-i~h~dl~~~nill~~~~~~kl~d~~~~~~   89 (188)
                      ..++||||+++.+|.... ....           |++.++.+||+   .+ ++|+|+||+||+++ ++.++++|||.+..
T Consensus       122 ~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~g~iiH~Dikp~NIli~-~~~i~LiDFg~a~~  197 (237)
T smart00090      122 RNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYK---EGELVHGDLSEYNILVH-DGKVVIIDVSQSVE  197 (237)
T ss_pred             CceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHh---cCCEEeCCCChhhEEEE-CCCEEEEEChhhhc
Confidence            458999999998887655 2221           89999999999   88 99999999999999 78999999998764


Q ss_pred             c
Q 039565           90 S   90 (188)
Q Consensus        90 ~   90 (188)
                      .
T Consensus       198 ~  198 (237)
T smart00090      198 L  198 (237)
T ss_pred             c
Confidence            3

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.88  E-value=2.1e-09  Score=74.11  Aligned_cols=83  Identities=16%  Similarity=0.125  Sum_probs=64.3

Q ss_pred             ccccC--CCeeeeccc---CCccEEEEecCCCCChhhh-----cCCcccHHHHHHHHhcCCCCCcEEeCCCCCcEEEccC
Q 039565            7 NKLTG--PLLVELIGK---QKNNALELGFRGNPELVDQ-----QGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEK   76 (188)
Q Consensus         7 ~~l~H--pniv~~~~~---~~~~~lv~e~~~~~~L~~~-----~~~~~~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~   76 (188)
                      .+++|  +++++++..   .+..++++||+.++++..+     .....+++.+++++|.....+++|+|++|.|++++..
T Consensus        46 ~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~  125 (155)
T cd05120          46 QLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLDEVSEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDG  125 (155)
T ss_pred             HHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeecccCCHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECC
Confidence            34444  477777766   5679999999998877643     1112289999999998433479999999999999998


Q ss_pred             CceEEecccCccc
Q 039565           77 VQAKLADFGQSRI   89 (188)
Q Consensus        77 ~~~kl~d~~~~~~   89 (188)
                      +.+++.||+.+..
T Consensus       126 ~~~~l~Df~~~~~  138 (155)
T cd05120         126 KILGIIDWEYAGY  138 (155)
T ss_pred             cEEEEEecccccC
Confidence            8999999998764

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>cd05119 RIO RIO kinase family, catalytic domain

Probab=98.74  E-value=2.2e-08  Score=72.26  Aligned_cols=66  Identities=20%  Similarity=0.223  Sum_probs=52.7

Q ss_pred             CccEEEEecCCCC-----ChhhhcCCcc------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEccCCceEEecccCcccc
Q 039565           22 KNNALELGFRGNP-----ELVDQQGKEE------VCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRIS   90 (188)
Q Consensus        22 ~~~~lv~e~~~~~-----~L~~~~~~~~------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~   90 (188)
                      ...+++|||++++     .|........      +++.++.++|..  .+++|+|++|+||+++ ++.++++|||.+...
T Consensus        88 ~~~~lv~e~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~lh~~--~~ivH~Dl~p~Nili~-~~~~~liDfg~a~~~  164 (187)
T cd05119          88 NRHVLVMEFIGGDGIPAPRLKDVRLLEDPEELYDQILELMRKLYRE--AGLVHGDLSEYNILVD-DGKVYIIDVPQAVEI  164 (187)
T ss_pred             CCCEEEEEEeCCCCccChhhhhhhhcccHHHHHHHHHHHHHHHhhc--cCcCcCCCChhhEEEE-CCcEEEEECcccccc
Confidence            3568999999984     4444332111      899999999973  7999999999999999 889999999988643

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.66  E-value=3.6e-08  Score=80.67  Aligned_cols=166  Identities=19%  Similarity=0.116  Sum_probs=117.9

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc------------cHHH----HHHHHhcCCCCCcEEeC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE------------VCCP----GLEYLHQGLKHPIIQRD   65 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~----~l~~Lh~~~~~~i~h~d   65 (188)
                      ...=.|+|.++.+..   .+..++-+|.+. .+|..+. ....            +...    |+..+|+   ..++|-|
T Consensus       172 ~~i~~~~~~v~~~~~~e~~~~lfiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs---~~~~~~~  247 (524)
T KOG0601|consen  172 HKIDSHENPVRDSPAWEGSGILFIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHS---NNIVHDD  247 (524)
T ss_pred             cccCccccccccCcccccCCcceeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCC---Ccccccc
Confidence            333458888886555   888899999998 5787777 2221            5555    9999999   9999999


Q ss_pred             CCCCcEEEccC-CceEEecccCcccccCCC---CCcceeeecccccccCCC-----CCCccchHHHHHHHHHHHhCCccc
Q 039565           66 MKSTNILLNEK-VQAKLADFGQSRISPVEG---GTHMSTTIAGTAGFLNTE-----LTEKSDVDSFEIVILEIITGILTV  136 (188)
Q Consensus        66 l~~~nill~~~-~~~kl~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~pe-----~~~~~di~s~G~~l~~~~~g~~p~  136 (188)
                      ++|.|+++..+ ..+++.||++...+....   .........+...|++||     .+..+|++++|-++.+...+..+.
T Consensus       248 ~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~  327 (524)
T KOG0601|consen  248 LKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLP  327 (524)
T ss_pred             cchhheecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccc
Confidence            99999999999 888999999876543221   111122225666788888     578899999999999887776332


Q ss_pred             ccc------------CCCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          137 DLS------------FKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       137 ~~~------------~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ...            .+.++-......+..++.++++.+|-.|++.+.+..
T Consensus       328 ~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~  378 (524)
T KOG0601|consen  328 SVGKNSSWSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA  378 (524)
T ss_pred             cCCCCCCccccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence            111            112222233456667899999999999999765543

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.65  E-value=8.3e-08  Score=68.51  Aligned_cols=72  Identities=18%  Similarity=0.238  Sum_probs=58.6

Q ss_pred             eeeeccc-CCccEEEEecCCCCChhhhc-CCcc----cHHHHHHHHhcCCCCCcEEeCCCCCcEEEccCCceEEecccCc
Q 039565           14 LVELIGK-QKNNALELGFRGNPELVDQQ-GKEE----VCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQS   87 (188)
Q Consensus        14 iv~~~~~-~~~~~lv~e~~~~~~L~~~~-~~~~----~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~   87 (188)
                      ++.++.+ +....++|||+++..|.+.+ ....    .+-.-+.-||.   .+|+|+|+.++||+++... +-+.|||++
T Consensus        63 ~P~v~dvD~~~~~I~me~I~G~~lkd~l~~~~~~~~r~vG~~vg~lH~---~givHGDLTtsNiIl~~~~-i~~IDfGLg  138 (204)
T COG3642          63 VPIVYDVDPDNGLIVMEYIEGELLKDALEEARPDLLREVGRLVGKLHK---AGIVHGDLTTSNIILSGGR-IYFIDFGLG  138 (204)
T ss_pred             CCeEEEEcCCCCEEEEEEeCChhHHHHHHhcchHHHHHHHHHHHHHHh---cCeecCCCccceEEEeCCc-EEEEECCcc
Confidence            3455556 78889999999999999888 3323    55566778999   9999999999999998875 788899998


Q ss_pred             cc
Q 039565           88 RI   89 (188)
Q Consensus        88 ~~   89 (188)
                      ..
T Consensus       139 ~~  140 (204)
T COG3642         139 EF  140 (204)
T ss_pred             cc
Confidence            74

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.63  E-value=1.1e-08  Score=85.14  Aligned_cols=129  Identities=19%  Similarity=0.215  Sum_probs=90.6

Q ss_pred             cHHHHHHHHhcCCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCC-------CCcceeeecccccccCCC-----
Q 039565           45 VCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEG-------GTHMSTTIAGTAGFLNTE-----  112 (188)
Q Consensus        45 ~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~-------~~~~~~~~~~~~~~~~pe-----  112 (188)
                      +++.|+.|+|..  .+++|+++.|++|.++.++.+|+..|+.+.......       .............|.+||     
T Consensus       107 ~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~  184 (700)
T KOG2137|consen  107 NVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGT  184 (700)
T ss_pred             cccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccc
Confidence            778999999984  799999999999999999999999998765432110       001111112233567777     


Q ss_pred             -CCCccchHHHHHHHHHHHh-CCccccccC---------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          113 -LTEKSDVDSFEIVILEIIT-GILTVDLSF---------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       113 -~~~~~di~s~G~~l~~~~~-g~~p~~~~~---------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                       .+.++|++|+|+++|.+.. |...++...               ........+.++.+-+...+..++..||++..+..
T Consensus       185 ~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~~  264 (700)
T KOG2137|consen  185 TNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLLLS  264 (700)
T ss_pred             cccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccccccccccCcHHHHHHHHHHhcCCcccCcchhhhhc
Confidence             4788999999999999884 443322110               01123455678888888999999999997766543

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.61  E-value=9.9e-08  Score=67.62  Aligned_cols=70  Identities=23%  Similarity=0.209  Sum_probs=54.7

Q ss_pred             eeeccc-CCccEEEEecCCCCChhhhcC----CcccHHHHHHHHhcCCCCC-----cEEeCCCCCcEEEccCCceEEecc
Q 039565           15 VELIGK-QKNNALELGFRGNPELVDQQG----KEEVCCPGLEYLHQGLKHP-----IIQRDMKSTNILLNEKVQAKLADF   84 (188)
Q Consensus        15 v~~~~~-~~~~~lv~e~~~~~~L~~~~~----~~~~i~~~l~~Lh~~~~~~-----i~h~dl~~~nill~~~~~~kl~d~   84 (188)
                      .+++.. ....++||||+++.++.....    ...+++.+++.||.   .+     ++|+|++|.||+++ ++.+++.||
T Consensus        56 P~~~~~~~~~~~lv~e~i~G~~l~~~~~~~~~~~~~l~~~l~~LH~---~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf  131 (170)
T cd05151          56 PKLYYFDPETGVLITEFIEGSELLTEDFSDPENLEKIAKLLKKLHS---SPLPDLVPCHNDLLPGNFLLD-DGRLWLIDW  131 (170)
T ss_pred             CceEEEeCCCCeEEEEecCCCccccccccCHHHHHHHHHHHHHHhC---CCCCCceeecCCCCcCcEEEE-CCeEEEEec
Confidence            445555 556789999999988875321    11289999999998   55     59999999999999 668999999


Q ss_pred             cCcc
Q 039565           85 GQSR   88 (188)
Q Consensus        85 ~~~~   88 (188)
                      +.+.
T Consensus       132 ~~a~  135 (170)
T cd05151         132 EYAG  135 (170)
T ss_pred             cccc
Confidence            9765

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.61  E-value=4.4e-08  Score=85.01  Aligned_cols=158  Identities=18%  Similarity=0.179  Sum_probs=114.6

Q ss_pred             CCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEcc
Q 039565           11 GPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTNILLNE   75 (188)
Q Consensus        11 Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~   75 (188)
                      ||-++....-   .....|+++|..+++|..-+++.+            .+..+++|||.   ..+.|+|++|.|++...
T Consensus       863 ~P~v~~~~~s~~~rsP~~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s---~~r~h~~~~p~~~l~~~  939 (1205)
T KOG0606|consen  863 SPAVVRSFPSFPCRSPLPLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHS---SLRKHRDLKPDSLLIAY  939 (1205)
T ss_pred             CCceecccCCCCCCCCcchhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhcccc---chhhcccccccchhhcc
Confidence            4555544333   788999999999889988873333            77889999998   66899999999999999


Q ss_pred             CCceEEecccCcccccCC----CC--------------------C-----cceeeecccccccCCC------CCCccchH
Q 039565           76 KVQAKLADFGQSRISPVE----GG--------------------T-----HMSTTIAGTAGFLNTE------LTEKSDVD  120 (188)
Q Consensus        76 ~~~~kl~d~~~~~~~~~~----~~--------------------~-----~~~~~~~~~~~~~~pe------~~~~~di~  120 (188)
                      ++..++.+|+........    +.                    .     .......+++.|.+||      ....+|.|
T Consensus       940 ~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~ 1019 (1205)
T KOG0606|consen  940 DGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWW 1019 (1205)
T ss_pred             cCCcccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhh
Confidence            999999998732211000    00                    0     0012356888899998      46789999


Q ss_pred             HHHHHHHHHHhCCccccccCCC--------------CcCHHHHHHHHHHHHHccCcCCCCCCCHH
Q 039565          121 SFEIVILEIITGILTVDLSFKG--------------EFDIISVEKAVEIAMASVSSKVNRRPLMN  171 (188)
Q Consensus       121 s~G~~l~~~~~g~~p~~~~~~~--------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~  171 (188)
                      +.|+++++.++|..||+.....              +.+........+++...+..+|.+|-.+.
T Consensus      1020 ~~g~~l~e~l~g~pp~na~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1020 SSGVCLFEVLTGIPPFNAETPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred             hhhhhhhhhhcCCCCCCCcchhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence            9999999999999998754332              23334555677888888888888887653

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.56  E-value=1.8e-07  Score=76.37  Aligned_cols=67  Identities=15%  Similarity=0.149  Sum_probs=53.9

Q ss_pred             CCccEEEEecCCCCChhhhcC--Ccc--------cHHH-HHHHHhcCCCCCcEEeCCCCCcEEEccCCceEEecccCccc
Q 039565           21 QKNNALELGFRGNPELVDQQG--KEE--------VCCP-GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI   89 (188)
Q Consensus        21 ~~~~~lv~e~~~~~~L~~~~~--~~~--------~i~~-~l~~Lh~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~   89 (188)
                      ....+++|||++|++|.++..  ..+        +++. .+..+|.   .+++|+|++|.||+++.++.+++.|||++..
T Consensus       230 ~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql~~---~g~~H~D~hPgNilv~~~g~i~liDfG~~~~  306 (437)
T TIGR01982       230 TSERVLTMEWIDGIPLSDIAALDEAGLDRKALAENLARSFLNQVLR---DGFFHADLHPGNIFVLKDGKIIALDFGIVGR  306 (437)
T ss_pred             cCCceEEEEeECCcccccHHHHHhcCCCHHHHHHHHHHHHHHHHHh---CCceeCCCCcccEEECCCCcEEEEeCCCeeE
Confidence            567899999999999988762  111        2233 3566787   8999999999999999999999999999875


Q ss_pred             c
Q 039565           90 S   90 (188)
Q Consensus        90 ~   90 (188)
                      .
T Consensus       307 l  307 (437)
T TIGR01982       307 L  307 (437)
T ss_pred             C
Confidence            4

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=98.54  E-value=9.4e-07  Score=72.01  Aligned_cols=155  Identities=13%  Similarity=0.152  Sum_probs=110.3

Q ss_pred             cccccCCCeeeeccc-------CCccEEEEecCCC-CChhhhc-CCcc--------------------------cHHHHH
Q 039565            6 RNKLTGPLLVELIGK-------QKNNALELGFRGN-PELVDQQ-GKEE--------------------------VCCPGL   50 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-------~~~~~lv~e~~~~-~~L~~~~-~~~~--------------------------~i~~~l   50 (188)
                      .+++.|+|||++.++       +..+.+|++|.+. ++|.+.. ....                          |+..||
T Consensus       327 wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL  406 (655)
T KOG3741|consen  327 WKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAAL  406 (655)
T ss_pred             HHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHH
Confidence            467899999999888       7788999999874 4776665 2211                          999999


Q ss_pred             HHHhcCCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCCCCCccchHHHHHHHHHHH
Q 039565           51 EYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILEII  130 (188)
Q Consensus        51 ~~Lh~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~di~s~G~~l~~~~  130 (188)
                      .++|+   .|..-+-|.+.+|+++.+.+++++..|...........    .         -|-..+-|.-.||.++..+.
T Consensus       407 ~sIHs---sGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d~~~----~---------le~~Qq~D~~~lG~ll~aLA  470 (655)
T KOG3741|consen  407 YSIHS---SGLACKTLDLKKILVTGKMRIRISGCGIMDVLQEDPTE----P---------LESQQQNDLRDLGLLLLALA  470 (655)
T ss_pred             HHHHh---cCceeecccHhHeEeeCcceEEEecccceeeecCCCCc----c---------hhHHhhhhHHHHHHHHHHHh
Confidence            99999   89999999999999999989999877766543311100    0         11245679999999999999


Q ss_pred             hCCcccc-----ccC-CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHH
Q 039565          131 TGILTVD-----LSF-KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVR  177 (188)
Q Consensus       131 ~g~~p~~-----~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l  177 (188)
                      +|..--.     ... ........+..+.+++.-....+++. -++.+++.++
T Consensus       471 t~~~ns~~~d~~~~s~~~~I~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~~  522 (655)
T KOG3741|consen  471 TGTENSNRTDSTQSSHLTRITTTYSTDLRNVVEYLESLNFRE-KSIQDLLPMI  522 (655)
T ss_pred             hcccccccccchHHHHHHHhhhhhhHHHHHHHHHHHhcCccc-ccHHHHHHHH
Confidence            9964211     111 12233345566777887777777775 5666666554

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.47  E-value=3.2e-07  Score=66.84  Aligned_cols=65  Identities=18%  Similarity=0.282  Sum_probs=49.4

Q ss_pred             CccEEEEecCCCCCh-----hhhc-CC------cccHHHHHHHH-hcCCCCCcEEeCCCCCcEEEccCCceEEecccCcc
Q 039565           22 KNNALELGFRGNPEL-----VDQQ-GK------EEVCCPGLEYL-HQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR   88 (188)
Q Consensus        22 ~~~~lv~e~~~~~~L-----~~~~-~~------~~~i~~~l~~L-h~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~   88 (188)
                      ...+++|||+.+..+     .+.. ..      ..+++.+|..+ |.   .+++|+|+++.||++.. +.+.++||+.+.
T Consensus        97 ~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~---~glVHGDLs~~NIL~~~-~~v~iIDF~qav  172 (197)
T cd05146          97 KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKE---CNLVHADLSEYNMLWHD-GKVWFIDVSQSV  172 (197)
T ss_pred             cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEEC-CcEEEEECCCce
Confidence            567899999986422     2222 11      11888999988 77   89999999999999974 678999999876


Q ss_pred             cc
Q 039565           89 IS   90 (188)
Q Consensus        89 ~~   90 (188)
                      ..
T Consensus       173 ~~  174 (197)
T cd05146         173 EP  174 (197)
T ss_pred             eC
Confidence            43

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.28  E-value=1.1e-05  Score=64.65  Aligned_cols=133  Identities=14%  Similarity=0.174  Sum_probs=94.7

Q ss_pred             cHHHHHHHHhcCCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-----------C
Q 039565           45 VCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-----------L  113 (188)
Q Consensus        45 ~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-----------~  113 (188)
                      .++.|.+-||.   .|.+-+|++++|+|+++.+.+.+.|-....+.   .......+..|...|.+||           -
T Consensus       125 nlA~aFA~lH~---~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~---~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r  198 (637)
T COG4248         125 NLASAFATLHE---HGHVVGDVNQNSFLVSDDSKVVLVDSDSFQIN---ANGTLHLCPVGVSEFTPPELQTLPSFVGFER  198 (637)
T ss_pred             HHHHHHHHHHh---cCCcccccCccceeeecCceEEEEcccceeec---cCCceEecccCccccCCHHHhccccccccCC
Confidence            88999999999   89999999999999999999998874332221   1112233456777788887           3


Q ss_pred             CCccchHHHHHHHHHHHhC-CccccccC-------------------------------CCCcCH-HHHHHHHHHHHHcc
Q 039565          114 TEKSDVDSFEIVILEIITG-ILTVDLSF-------------------------------KGEFDI-ISVEKAVEIAMASV  160 (188)
Q Consensus       114 ~~~~di~s~G~~l~~~~~g-~~p~~~~~-------------------------------~~~~~~-~~~~~~~~l~~~cl  160 (188)
                      +...|.|.+|+++++++-| +-||....                               +.+.+. .....+..+..+|.
T Consensus       199 ~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF  278 (637)
T COG4248         199 TANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAF  278 (637)
T ss_pred             CccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHh
Confidence            6789999999999999865 65553110                               112222 23345667777887


Q ss_pred             CcC--CCCCCCHHHHHHHHhhccCc
Q 039565          161 SSK--VNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       161 ~~~--p~~Rps~~~i~~~l~~~~~~  183 (188)
                      ...  +.-|||++..+..|..+.++
T Consensus       279 ~~~~~~~~RP~a~aW~aAl~al~~~  303 (637)
T COG4248         279 TESGVATPRPTAKAWVAALDALRQQ  303 (637)
T ss_pred             cccCCCCCCCCHHHHHHHHHHHHHh
Confidence            643  56899999998888776554

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.27  E-value=5.8e-07  Score=73.75  Aligned_cols=167  Identities=17%  Similarity=0.105  Sum_probs=107.6

Q ss_pred             cCCCeeeecc-c--CCccEEEEecCCCCChhhhc---CCc---c------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEc
Q 039565           10 TGPLLVELIG-K--QKNNALELGFRGNPELVDQQ---GKE---E------VCCPGLEYLHQGLKHPIIQRDMKSTNILLN   74 (188)
Q Consensus        10 ~Hpniv~~~~-~--~~~~~lv~e~~~~~~L~~~~---~~~---~------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~   74 (188)
                      .|.++++... |  -.+.++-.|||.++++....   ...   .      |++.++.++|+   ...+|.|++|.||++.
T Consensus       324 ~~~~~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s---~~~~~~d~~psni~i~  400 (524)
T KOG0601|consen  324 SHLPSVGKNSSWSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHS---KLFVHLDVKPSNILIS  400 (524)
T ss_pred             cccccCCCCCCccccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccc---hhhhcccccccceeec
Confidence            4566665433 3  56777999999988776655   111   1      99999999998   9999999999999999


Q ss_pred             cC-CceEEecccCcccccCCCCCc-ceeeec-cccccc-CCCCCCccchHHHHHHHHHHHhCCcc-ccc--------cCC
Q 039565           75 EK-VQAKLADFGQSRISPVEGGTH-MSTTIA-GTAGFL-NTELTEKSDVDSFEIVILEIITGILT-VDL--------SFK  141 (188)
Q Consensus        75 ~~-~~~kl~d~~~~~~~~~~~~~~-~~~~~~-~~~~~~-~pe~~~~~di~s~G~~l~~~~~g~~p-~~~--------~~~  141 (188)
                      .+ +..++.|++.+..+....... ...... +....+ .-++..+.|++|||..+.+.+++... ...        ...
T Consensus       401 ~~~~~~~~~~~~~~t~~~~~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~~~i~~~~~  480 (524)
T KOG0601|consen  401 NDGFFSKLGDFGCWTRLAFSSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQSLTIRSGDT  480 (524)
T ss_pred             cchhhhhccccccccccceecccccccccccccchhhccccccccccccccccccccccccCcccCcccccceeeecccc
Confidence            86 778899998875322111100 001111 000000 01167889999999999998887632 111        101


Q ss_pred             CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhc
Q 039565          142 GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQG  180 (188)
Q Consensus       142 ~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~  180 (188)
                      ...+ .....+..+....+..++..||++.++..+.+-.
T Consensus       481 p~~~-~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~  518 (524)
T KOG0601|consen  481 PNLP-GLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFY  518 (524)
T ss_pred             cCCC-chHHhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence            1111 2225666777778899999999998877655443

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.23  E-value=3.4e-06  Score=60.43  Aligned_cols=67  Identities=27%  Similarity=0.337  Sum_probs=52.6

Q ss_pred             CCccEEEEecCCC-CChhhhc-CCcc-------------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEccCC---ceEEe
Q 039565           21 QKNNALELGFRGN-PELVDQQ-GKEE-------------VCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKV---QAKLA   82 (188)
Q Consensus        21 ~~~~~lv~e~~~~-~~L~~~~-~~~~-------------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~---~~kl~   82 (188)
                      .....+.|||+++ .++.+++ ....             .+-+.+.-||.   .+++|+||..+||++..++   .+-+.
T Consensus        82 ~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~---ndiiHGDLTTSNill~~~~~~~~~~lI  158 (229)
T KOG3087|consen   82 TYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHD---NDIIHGDLTTSNILLRSDGNQITPILI  158 (229)
T ss_pred             cCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhh---CCeecccccccceEEecCCCcCceEEE
Confidence            6778899999986 3777777 2111             55677889999   9999999999999997665   34789


Q ss_pred             cccCcccc
Q 039565           83 DFGQSRIS   90 (188)
Q Consensus        83 d~~~~~~~   90 (188)
                      |||++...
T Consensus       159 dfgls~~s  166 (229)
T KOG3087|consen  159 DFGLSSVS  166 (229)
T ss_pred             eecchhcc
Confidence            99998754

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.18  E-value=3.1e-06  Score=64.74  Aligned_cols=64  Identities=16%  Similarity=0.144  Sum_probs=52.7

Q ss_pred             ccEEEEecCCCC-ChhhhcCC---cc-----------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEcc-------CCceE
Q 039565           23 NNALELGFRGNP-ELVDQQGK---EE-----------VCCPGLEYLHQGLKHPIIQRDMKSTNILLNE-------KVQAK   80 (188)
Q Consensus        23 ~~~lv~e~~~~~-~L~~~~~~---~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~-------~~~~k   80 (188)
                      ..++|+|++++. +|.+++..   ..           +++..+.-||.   .|++|+|+++.||+++.       +..+.
T Consensus       109 ~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~---~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~  185 (268)
T PRK15123        109 TSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHA---AGINHRDCYICHFLLHLPFPGREEDLKLS  185 (268)
T ss_pred             eeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHH---CcCccCCCChhhEEEeccccCCCCCceEE
Confidence            478999999975 88888621   11           78899999999   99999999999999975       45789


Q ss_pred             EecccCccc
Q 039565           81 LADFGQSRI   89 (188)
Q Consensus        81 l~d~~~~~~   89 (188)
                      ++||+.+..
T Consensus       186 LIDl~r~~~  194 (268)
T PRK15123        186 VIDLHRAQI  194 (268)
T ss_pred             EEECCcccc
Confidence            999997753

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=98.16  E-value=4.3e-06  Score=69.68  Aligned_cols=67  Identities=12%  Similarity=0.075  Sum_probs=50.2

Q ss_pred             CCccEEEEecCCCCChhhhc--CCcc----cHHH-----HHHHHhcCCCCCcEEeCCCCCcEEEccCC----ceEEeccc
Q 039565           21 QKNNALELGFRGNPELVDQQ--GKEE----VCCP-----GLEYLHQGLKHPIIQRDMKSTNILLNEKV----QAKLADFG   85 (188)
Q Consensus        21 ~~~~~lv~e~~~~~~L~~~~--~~~~----~i~~-----~l~~Lh~~~~~~i~h~dl~~~nill~~~~----~~kl~d~~   85 (188)
                      .....++|||++|+.+.++-  ...+    .++.     -+.-+..   .+++|+|++|.||+++.++    .+++.|||
T Consensus       233 st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif~---~GffHaDpHPGNIlv~~~g~~~~~i~llDFG  309 (537)
T PRK04750        233 CSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVFR---DGFFHADMHPGNIFVSYDPPENPRYIALDFG  309 (537)
T ss_pred             CCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHHh---CCeeeCCCChHHeEEecCCCCCCeEEEEecc
Confidence            66788999999999998753  2222    2222     1222344   8999999999999999887    99999999


Q ss_pred             Ccccc
Q 039565           86 QSRIS   90 (188)
Q Consensus        86 ~~~~~   90 (188)
                      +....
T Consensus       310 ivg~l  314 (537)
T PRK04750        310 IVGSL  314 (537)
T ss_pred             eEEEC
Confidence            87654

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.10  E-value=5.4e-06  Score=61.02  Aligned_cols=64  Identities=20%  Similarity=0.219  Sum_probs=53.9

Q ss_pred             ccEEEEecCCCC-ChhhhcCC-----cc-------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEccCC---ceEEecccC
Q 039565           23 NNALELGFRGNP-ELVDQQGK-----EE-------VCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKV---QAKLADFGQ   86 (188)
Q Consensus        23 ~~~lv~e~~~~~-~L~~~~~~-----~~-------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~---~~kl~d~~~   86 (188)
                      ..++|+|++++. +|.+++..     ..       +++..++-||+   .+++|+|+++.|||+..++   .+.++||+.
T Consensus        91 ~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~lH~---~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~  167 (206)
T PF06293_consen   91 RSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKLHD---AGIYHGDLNPSNILVDPDDGQYRFYLIDLDR  167 (206)
T ss_pred             eEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHHHH---CcCCCCCCCcccEEEeCCCCceeEEEEcchh
Confidence            458999999874 79998843     11       88899999999   9999999999999999886   788999987


Q ss_pred             ccc
Q 039565           87 SRI   89 (188)
Q Consensus        87 ~~~   89 (188)
                      ++.
T Consensus       168 ~~~  170 (206)
T PF06293_consen  168 MRF  170 (206)
T ss_pred             cee
Confidence            664

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.02  E-value=8.9e-06  Score=60.06  Aligned_cols=64  Identities=20%  Similarity=0.287  Sum_probs=51.9

Q ss_pred             CCccEEEEecCCCCChhhhcCCc----ccHHHHHHHHhcCCCCCcEEeCCCCCcEEEccCCceEEecccCcc
Q 039565           21 QKNNALELGFRGNPELVDQQGKE----EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR   88 (188)
Q Consensus        21 ~~~~~lv~e~~~~~~L~~~~~~~----~~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~   88 (188)
                      ....+++|||++|..|.+..+-.    ..+.+++.-+|.   .|+.|+|..|.|++++.++ +++.|++..+
T Consensus       115 ~~~~~ll~EYIeG~~l~d~~~i~e~~~~ki~~~ikqlH~---~G~~HGD~hpgNFlv~~~~-i~iID~~~k~  182 (229)
T PF06176_consen  115 TSSYVLLMEYIEGVELNDIEDIDEDLAEKIVEAIKQLHK---HGFYHGDPHPGNFLVSNNG-IRIIDTQGKR  182 (229)
T ss_pred             eeEEEEEEEEecCeecccchhcCHHHHHHHHHHHHHHHH---cCCccCCCCcCcEEEECCc-EEEEECcccc
Confidence            45567899999998887765222    268899999999   9999999999999998654 8899997554

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.95  E-value=1.5e-05  Score=57.83  Aligned_cols=71  Identities=21%  Similarity=0.319  Sum_probs=45.6

Q ss_pred             eeeecccCCccEEEEecCC--CCChhhhcCCc---c-------cHHHHHHH-HhcCCCCCcEEeCCCCCcEEEccCCceE
Q 039565           14 LVELIGKQKNNALELGFRG--NPELVDQQGKE---E-------VCCPGLEY-LHQGLKHPIIQRDMKSTNILLNEKVQAK   80 (188)
Q Consensus        14 iv~~~~~~~~~~lv~e~~~--~~~L~~~~~~~---~-------~i~~~l~~-Lh~~~~~~i~h~dl~~~nill~~~~~~k   80 (188)
                      +++.+.+ ....+||||++  +..+..+.+..   .       ++...+.. +|.   .+++|+|+++.||+++.+ .+.
T Consensus        72 vP~p~~~-~~~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~~~---~givHGDLs~~NIlv~~~-~~~  146 (188)
T PF01163_consen   72 VPKPYDY-NRNVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKMLHK---AGIVHGDLSEYNILVDDG-KVY  146 (188)
T ss_dssp             S--EEEE-ETTEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHHHC---TTEEESS-STTSEEEETT-CEE
T ss_pred             CCcEEEE-eCCEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHHHh---cCceecCCChhhEEeecc-eEE
Confidence            4445444 35679999998  65555444222   1       66665555 467   899999999999999988 899


Q ss_pred             EecccCccc
Q 039565           81 LADFGQSRI   89 (188)
Q Consensus        81 l~d~~~~~~   89 (188)
                      +.||+.+..
T Consensus       147 iIDf~qav~  155 (188)
T PF01163_consen  147 IIDFGQAVD  155 (188)
T ss_dssp             E--GTTEEE
T ss_pred             EEecCccee
Confidence            999987764

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PRK09902 hypothetical protein; Provisional

Probab=97.62  E-value=0.00014  Score=53.53  Aligned_cols=65  Identities=12%  Similarity=0.037  Sum_probs=52.6

Q ss_pred             CccEEEEecCCC-CChhhhcCC--c---c---------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEccCCc--eEEecc
Q 039565           22 KNNALELGFRGN-PELVDQQGK--E---E---------VCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQ--AKLADF   84 (188)
Q Consensus        22 ~~~~lv~e~~~~-~~L~~~~~~--~---~---------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~~--~kl~d~   84 (188)
                      ....||+|-+++ -+|.+++..  .   +         +++..++-||+   .++.|+|+.+.||+++..+.  +++.||
T Consensus        98 ~rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~---~Gv~Hgdly~khIll~~~g~~~v~lIDl  174 (216)
T PRK09902         98 WRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHS---VNRQHGCCYVRHIYVKTEGKAEAGFLDL  174 (216)
T ss_pred             eEEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHhheeecCCCCeeEEEEEh
Confidence            346799997764 489888722  1   1         88999999999   99999999999999986666  899999


Q ss_pred             cCccc
Q 039565           85 GQSRI   89 (188)
Q Consensus        85 ~~~~~   89 (188)
                      ..++.
T Consensus       175 Ek~r~  179 (216)
T PRK09902        175 EKSRR  179 (216)
T ss_pred             hccch
Confidence            87663

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=97.51  E-value=0.00014  Score=55.21  Aligned_cols=65  Identities=18%  Similarity=0.211  Sum_probs=48.5

Q ss_pred             CCccEEEEecCCCCChhhhc-CCcc------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEccCCceEEecccCcc
Q 039565           21 QKNNALELGFRGNPELVDQQ-GKEE------VCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR   88 (188)
Q Consensus        21 ~~~~~lv~e~~~~~~L~~~~-~~~~------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~   88 (188)
                      .+...++||++++-.|...- +...      .++.-+.-+..   .|++|+|+++-||+++++|.+.+.||--+.
T Consensus       179 ~nRHaVvMe~ieG~eL~~~r~~~en~~~il~~il~~~~~~~~---~GiVHGDlSefNIlV~~dg~~~vIDwPQ~v  250 (304)
T COG0478         179 WNRHAVVMEYIEGVELYRLRLDVENPDEILDKILEEVRKAYR---RGIVHGDLSEFNILVTEDGDIVVIDWPQAV  250 (304)
T ss_pred             cccceeeeehcccceeecccCcccCHHHHHHHHHHHHHHHHH---cCccccCCchheEEEecCCCEEEEeCcccc
Confidence            45678999999986665544 1222      44454554555   899999999999999999999999996443

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=97.32  E-value=0.0007  Score=49.71  Aligned_cols=76  Identities=12%  Similarity=0.099  Sum_probs=54.8

Q ss_pred             Ceeeeccc-C-----CccEEEEecCCCCChhhhcC--Cc---------ccHHHHHHHHhcCC------------------
Q 039565           13 LLVELIGK-Q-----KNNALELGFRGNPELVDQQG--KE---------EVCCPGLEYLHQGL------------------   57 (188)
Q Consensus        13 niv~~~~~-~-----~~~~lv~e~~~~~~L~~~~~--~~---------~~i~~~l~~Lh~~~------------------   57 (188)
                      ++.+++.+ .     +..+++|||+++.++...+.  ..         .+++.+|..||+..                  
T Consensus        58 ~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~  137 (223)
T cd05154          58 PVPKVLALCEDPSVLGTPFYVMERVDGRVLRDRLLRPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLER  137 (223)
T ss_pred             CCCCEEEECCCCCccCCceEEEEEeCCEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHH
Confidence            35555555 2     25689999999988877652  11         16777777777421                  


Q ss_pred             -----------------------------------CCCcEEeCCCCCcEEEcc--CCceEEecccCcc
Q 039565           58 -----------------------------------KHPIIQRDMKSTNILLNE--KVQAKLADFGQSR   88 (188)
Q Consensus        58 -----------------------------------~~~i~h~dl~~~nill~~--~~~~kl~d~~~~~   88 (188)
                                                         ...++|+|+.+.||+++.  ++.+.+.||+.+.
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~  205 (223)
T cd05154         138 QVARWRRQYDASRTDEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT  205 (223)
T ss_pred             HHHHHHHHHHhhcccccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence                                               245799999999999998  5667899998765

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=97.20  E-value=0.014  Score=42.41  Aligned_cols=75  Identities=20%  Similarity=0.163  Sum_probs=56.8

Q ss_pred             CCeeeecccCCccEEEEecCCCCCh-------hhhcCCc-c-------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEccC
Q 039565           12 PLLVELIGKQKNNALELGFRGNPEL-------VDQQGKE-E-------VCCPGLEYLHQGLKHPIIQRDMKSTNILLNEK   76 (188)
Q Consensus        12 pniv~~~~~~~~~~lv~e~~~~~~L-------~~~~~~~-~-------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~   76 (188)
                      +++++++|..+. .++.||.+.+++       .++.... .       +++..+.+++++....+.-+|++++|+.++++
T Consensus        20 ~~~pk~lG~CG~-~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~~~   98 (188)
T PF12260_consen   20 EPFPKLLGSCGR-FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFFYLCDVSPDNFGVNDD   98 (188)
T ss_pred             CCCCCeeeECCC-EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecchHHeEEeCC
Confidence            478889887323 568999986644       4444222 2       77888888887655668999999999999999


Q ss_pred             CceEEecccCc
Q 039565           77 VQAKLADFGQS   87 (188)
Q Consensus        77 ~~~kl~d~~~~   87 (188)
                      +++|+.|..-.
T Consensus        99 ~~lk~iDld~v  109 (188)
T PF12260_consen   99 GRLKLIDLDDV  109 (188)
T ss_pred             CcEEEEechhc
Confidence            99999998644

Proteins in this uncharacterised family are described as transmembrane proteins.

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=96.85  E-value=0.00057  Score=61.04  Aligned_cols=168  Identities=13%  Similarity=0.086  Sum_probs=97.5

Q ss_pred             CCcccccCCCeeeeccc------CC-ccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEe
Q 039565            4 PNRNKLTGPLLVELIGK------QK-NNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQR   64 (188)
Q Consensus         4 ~~l~~l~Hpniv~~~~~------~~-~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~   64 (188)
                      ..+.++.|+|++.++++      .+ ...+..+++..-++...+..-+            +...||+|+|+   ....|.
T Consensus       234 ~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~---~~l~~v  310 (1351)
T KOG1035|consen  234 ESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHS---LSLEHV  310 (1351)
T ss_pred             HHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHH---hcccee
Confidence            34678899999999888      22 2334556777777776662222            78899999998   544443


Q ss_pred             CCCCC---cEEEccCCceEEe--cccCcccccCCCCCcceeeecccccccCCC--------CCCccchHHHHHHHHHHHh
Q 039565           65 DMKST---NILLNEKVQAKLA--DFGQSRISPVEGGTHMSTTIAGTAGFLNTE--------LTEKSDVDSFEIVILEIIT  131 (188)
Q Consensus        65 dl~~~---nill~~~~~~kl~--d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe--------~~~~~di~s~G~~l~~~~~  131 (188)
                      -+...   +-..+..+....+  ||+..+......... .  ..-+..+.+++        .+...|+|.+|.....+..
T Consensus       311 ~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~-~--~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~~~  387 (1351)
T KOG1035|consen  311 VLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSF-S--DLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLLQLSQ  387 (1351)
T ss_pred             EEecccccccccCccceeecchhhhcccccCCCcccch-h--hcCccccccccccccccchhhhhhHHHHHHHHHhhhhh
Confidence            33333   2223333444444  666555432111110 1  11112233333        2344699999999999988


Q ss_pred             CCcccc-ccCCCCc-CHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHH
Q 039565          132 GILTVD-LSFKGEF-DIISVEKAVEIAMASVSSKVNRRPLMNQVVMVR  177 (188)
Q Consensus       132 g~~p~~-~~~~~~~-~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l  177 (188)
                      |..+-. ......+ +........+....|+..++++|+++.+++...
T Consensus       388 ~~~i~~~~~~~~~~l~~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~  435 (1351)
T KOG1035|consen  388 GEDISEKSAVPVSLLDVLSTSELLDALPKCLDEDSEERLSALELLTHP  435 (1351)
T ss_pred             cCcccccccchhhhhccccchhhhhhhhhhcchhhhhccchhhhhhch
Confidence            763221 1111111 111111567888899999999999999998753

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=96.26  E-value=0.0074  Score=50.53  Aligned_cols=73  Identities=16%  Similarity=0.210  Sum_probs=50.9

Q ss_pred             eeeeccc-CCccEEEEecCCCCChhhhc--CCcc----cHHHHH-----HHHhcCCCCCcEEeCCCCCcEEEcc----CC
Q 039565           14 LVELIGK-QKNNALELGFRGNPELVDQQ--GKEE----VCCPGL-----EYLHQGLKHPIIQRDMKSTNILLNE----KV   77 (188)
Q Consensus        14 iv~~~~~-~~~~~lv~e~~~~~~L~~~~--~~~~----~i~~~l-----~~Lh~~~~~~i~h~dl~~~nill~~----~~   77 (188)
                      |++++-- .....|+|||++|..+.+.-  ++.+    +++..+     .-+-.   .|.+|+|-.|.||++..    ++
T Consensus       266 VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~~~~qIf~---~GffHaDPHPGNilv~~~~~~~~  342 (538)
T KOG1235|consen  266 VPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKRGISPHDILNKLVEAYLEQIFK---TGFFHADPHPGNILVRPNPEGDE  342 (538)
T ss_pred             CCeehhhcCcceEEEEEecCCccCCCHHHHHHcCCCHHHHHHHHHHHHHHHHHh---cCCccCCCCCCcEEEecCCCCCc
Confidence            4444444 67889999999998766655  3333    332222     12223   68999999999999984    56


Q ss_pred             ceEEecccCccc
Q 039565           78 QAKLADFGQSRI   89 (188)
Q Consensus        78 ~~kl~d~~~~~~   89 (188)
                      .+.+.|+|+...
T Consensus       343 ~ivllDhGl~~~  354 (538)
T KOG1235|consen  343 EIVLLDHGLYAV  354 (538)
T ss_pred             cEEEEccccccc
Confidence            889999998764

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=96.26  E-value=0.01  Score=49.70  Aligned_cols=67  Identities=18%  Similarity=0.175  Sum_probs=51.2

Q ss_pred             CCccEEEEecCCCCChhhhc--CCcc----cHHHHH-----HHHhcCCCCCcEEeCCCCCcEEEccCCceEEecccCccc
Q 039565           21 QKNNALELGFRGNPELVDQQ--GKEE----VCCPGL-----EYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI   89 (188)
Q Consensus        21 ~~~~~lv~e~~~~~~L~~~~--~~~~----~i~~~l-----~~Lh~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~   89 (188)
                      .....|+|||++|-.+.+..  +..+    .++..+     ..+-.   .+.+|+|..|.||++..+|...+.|||....
T Consensus       238 t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f~~q~~~---dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~  314 (517)
T COG0661         238 TTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAFLRQLLR---DGFFHADPHPGNILVRSDGRIVLLDFGIVGR  314 (517)
T ss_pred             cCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHHHHHHHh---cCccccCCCccceEEecCCcEEEEcCcceec
Confidence            67889999999998888885  3322    233222     22223   7999999999999999999999999998764


Q ss_pred             c
Q 039565           90 S   90 (188)
Q Consensus        90 ~   90 (188)
                      .
T Consensus       315 l  315 (517)
T COG0661         315 L  315 (517)
T ss_pred             C
Confidence            3

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=96.09  E-value=0.0058  Score=50.81  Aligned_cols=130  Identities=18%  Similarity=0.134  Sum_probs=77.7

Q ss_pred             CCCcccccCCCeeeeccc----CCccEEEEecCCCCChhhhcCCcc-cHHHHHHHHhcCCCCCcEEeCCCCCcEEEccCC
Q 039565            3 FPNRNKLTGPLLVELIGK----QKNNALELGFRGNPELVDQQGKEE-VCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKV   77 (188)
Q Consensus         3 ~~~l~~l~Hpniv~~~~~----~~~~~lv~e~~~~~~L~~~~~~~~-~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~   77 (188)
                      |+-++.+.|+|....+.+    .....+|+|++. .||.+++.... ...+++    .   +++.|-     |+      
T Consensus        33 ~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~~-~Sled~~~~~~l~~~s~~----~---~~~~~~-----~~------   93 (725)
T KOG1093|consen   33 FQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHYT-MSLEDILKTGNLKDESLL----A---HGVLHL-----NI------   93 (725)
T ss_pred             hHHHHhhcCccceeeEeeecCccceEEEEehhhc-cchHHHHHhcccchhhhc----c---ccccee-----hh------
Confidence            455788999999998888    555789999997 59999882222 111111    1   333321     11      


Q ss_pred             ceEEecccCcccccCCCCCcceeeecccccccCCCCCCccchHHHHHHHHHHHhCCccccccC--------------C--
Q 039565           78 QAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILEIITGILTVDLSF--------------K--  141 (188)
Q Consensus        78 ~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~di~s~G~~l~~~~~g~~p~~~~~--------------~--  141 (188)
                       ...+| .+..    ..     ..          -..+++||||+|.++.++.-|...+..-.              +  
T Consensus        94 -~~~td-~~~t----~~-----~~----------~~~pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~~~d~~  152 (725)
T KOG1093|consen   94 -IYITD-HFLT----KY-----PS----------PIGPKSDVWSLGFIILELYLGISLEAELTESEYLEILLKYYTDDQE  152 (725)
T ss_pred             -hhccc-cccc----cC-----CC----------CCCcchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCchh
Confidence             11222 0000    00     00          02359999999999999988775332110              0  


Q ss_pred             -------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHH
Q 039565          142 -------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQ  172 (188)
Q Consensus       142 -------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~  172 (188)
                             ..+...+.+...++...|+...|..||...+
T Consensus       153 ~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~  190 (725)
T KOG1093|consen  153 LLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPLPME  190 (725)
T ss_pred             HHHHHHHHHHHHhhhHhHHHHhccCCccccccccchhH
Confidence                   0122345567788888999999999996543

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=95.48  E-value=0.004  Score=52.81  Aligned_cols=118  Identities=21%  Similarity=0.213  Sum_probs=77.2

Q ss_pred             cccccCCC-eeeeccc---CCccEEEEecCCCC-Chhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCC
Q 039565            6 RNKLTGPL-LVELIGK---QKNNALELGFRGNP-ELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMK   67 (188)
Q Consensus         6 l~~l~Hpn-iv~~~~~---~~~~~lv~e~~~~~-~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~   67 (188)
                      |-+++||| .++.++-   ....++.++++..+ +-..-. ....            .-..+++++|+   ..-+|+|  
T Consensus       287 LdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~---~~~~~~d--  361 (829)
T KOG0576|consen  287 LDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHS---SYKVHRD--  361 (829)
T ss_pred             HHHccCCCCcccccccCCcccccchhhhhhcCCccccccCChhhHhhhhhhhhhhhhhhccccccccc---ccccCcc--
Confidence            34788999 5555444   67788999999876 222111 0000            44578888987   4446776  


Q ss_pred             CCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCc
Q 039565           68 STNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGIL  134 (188)
Q Consensus        68 ~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~  134 (188)
                        ||+.++ +..+..+|++.......   ....+..+++.|++||      +..+.|.|+.+.--.++..|..
T Consensus       362 --~~l~s~-~~~~~~~~~v~~~L~~~---~~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~p  428 (829)
T KOG0576|consen  362 --NILGSE-EEVKLLDFAVPPQLTRT---MKPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLP  428 (829)
T ss_pred             --cccccc-cccccccccCCcccCcc---cccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCC
Confidence              666554 56788888876543311   1455677889999999      5678899999876555555554

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=95.16  E-value=0.057  Score=40.91  Aligned_cols=66  Identities=21%  Similarity=0.272  Sum_probs=46.6

Q ss_pred             CccEEEEecCCCC-----ChhhhcCCc--c-----cHHHHHHHHhcCCCCCcEEeCCCCCcEEEccCCceEEecccCccc
Q 039565           22 KNNALELGFRGNP-----ELVDQQGKE--E-----VCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI   89 (188)
Q Consensus        22 ~~~~lv~e~~~~~-----~L~~~~~~~--~-----~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~   89 (188)
                      .+..|+|||++..     .|.+.-...  .     ++.+.+.-|..  ..+++|+||+.-|||+. ++.+.++|++-+..
T Consensus       139 ~~nVLvMEfIg~~g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~--~a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~  215 (268)
T COG1718         139 RNNVLVMEFIGDDGLPAPRLKDVPLELEEAEGLYEDVVEYMRRLYK--EAGLVHGDLSEYNILVH-DGEPYIIDVSQAVT  215 (268)
T ss_pred             cCCeEEEEeccCCCCCCCCcccCCcCchhHHHHHHHHHHHHHHHHH--hcCcccccchhhheEEE-CCeEEEEECccccc
Confidence            4567899998643     222222111  1     66677776665  27999999999999999 77899999987764


Q ss_pred             c
Q 039565           90 S   90 (188)
Q Consensus        90 ~   90 (188)
                      .
T Consensus       216 ~  216 (268)
T COG1718         216 I  216 (268)
T ss_pred             c
Confidence            3

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=94.27  E-value=0.18  Score=36.97  Aligned_cols=73  Identities=22%  Similarity=0.289  Sum_probs=52.0

Q ss_pred             cccCCCeeeeccc---CCccEEEEecCCC------CChhhhcCCcc---cHHHHH----HHHhcCCCCCcEEeCCCCCcE
Q 039565            8 KLTGPLLVELIGK---QKNNALELGFRGN------PELVDQQGKEE---VCCPGL----EYLHQGLKHPIIQRDMKSTNI   71 (188)
Q Consensus         8 ~l~Hpniv~~~~~---~~~~~lv~e~~~~------~~L~~~~~~~~---~i~~~l----~~Lh~~~~~~i~h~dl~~~ni   71 (188)
                      ...+.+|.+++|+   +...-+|+|.+.+      -+|.+++....   .+.++|    .||-+   ..|+.+|++|.||
T Consensus        73 ~~~~~~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~~~~~~~~~L~~f~~~l~~---~~Iv~~dl~~~NI  149 (199)
T PF10707_consen   73 GVDWSHIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYLKEGGLTEELRQALDEFKRYLLD---HHIVIRDLNPHNI  149 (199)
T ss_pred             CCcccccccEeEEEecCCceEEEEEEEECCCCCcCccHHHHHHcCCccHHHHHHHHHHHHHHHH---cCCeecCCCcccE
Confidence            4568889999999   6677888887632      27888883333   344444    35666   8999999999999


Q ss_pred             EEccCC----ceEEec
Q 039565           72 LLNEKV----QAKLAD   83 (188)
Q Consensus        72 ll~~~~----~~kl~d   83 (188)
                      ++....    .+.++|
T Consensus       150 v~~~~~~~~~~lvlID  165 (199)
T PF10707_consen  150 VVQRRDSGEFRLVLID  165 (199)
T ss_pred             EEEecCCCceEEEEEe
Confidence            996432    467777

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=94.22  E-value=0.055  Score=40.54  Aligned_cols=96  Identities=15%  Similarity=0.110  Sum_probs=55.5

Q ss_pred             CCccEEEEecCCCC--ChhhhcCCcccH-HHHHHHHhcCCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCc
Q 039565           21 QKNNALELGFRGNP--ELVDQQGKEEVC-CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTH   97 (188)
Q Consensus        21 ~~~~~lv~e~~~~~--~L~~~~~~~~~i-~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~   97 (188)
                      ....-+|+|.|-..  ....++    -+ ..+|.-.|++ ..+.+|+|.+|+||+-++.|-+|+.|-+.-..        
T Consensus       126 ~~~yGvIlE~Cy~~~i~~~N~i----~agi~~L~~fH~~-~~~~lHGD~np~NiM~D~~G~lKlVDP~~Ll~--------  192 (308)
T PF07387_consen  126 NYKYGVILERCYKIKINFSNFI----TAGIKDLMDFHSE-NQHCLHGDCNPDNIMCDKFGYLKLVDPVCLLE--------  192 (308)
T ss_pred             CceeEEEEeeccCcccchhHHH----HHhHHHHHHhhcc-CCCeecCCCChhheeecCCCCEEecChhhhhh--------
Confidence            44556788877421  111111    11 3556677742 35789999999999999999999999653210        


Q ss_pred             ceeeecccccccCCCCCCccchHHHHHHHHHHHhC
Q 039565           98 MSTTIAGTAGFLNTELTEKSDVDSFEIVILEIITG  132 (188)
Q Consensus        98 ~~~~~~~~~~~~~pe~~~~~di~s~G~~l~~~~~g  132 (188)
                      ....+.. ..|.+  .++++++-+|=..+.++...
T Consensus       193 ~~V~~vN-~~Y~~--lT~~aE~~~fv~s~l~~v~~  224 (308)
T PF07387_consen  193 NQVNMVN-IEYES--LTQEAEVKVFVKSCLKLVEK  224 (308)
T ss_pred             heeeEEe-eeccc--cChHHHHHHHHHHHHHHHHH
Confidence            0001111 11211  46677777766555555543

The function of this family is unknown.

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=93.75  E-value=0.072  Score=39.84  Aligned_cols=30  Identities=20%  Similarity=0.318  Sum_probs=25.5

Q ss_pred             CCcEEeCCCCCcEEEccCCceEEecccCcc
Q 039565           59 HPIIQRDMKSTNILLNEKVQAKLADFGQSR   88 (188)
Q Consensus        59 ~~i~h~dl~~~nill~~~~~~kl~d~~~~~   88 (188)
                      .+++|+|+.+.|++++.+....+.||+.+.
T Consensus       164 ~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~  193 (235)
T cd05155         164 PVWFHGDLAPGNLLVQDGRLSAVIDFGCLG  193 (235)
T ss_pred             ceEEeCCCCCCcEEEECCCEEEEEeCcccC
Confidence            458999999999999877667899998765

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=93.41  E-value=0.0064  Score=56.55  Aligned_cols=129  Identities=11%  Similarity=-0.016  Sum_probs=89.2

Q ss_pred             cccccCCCeeeeccc-----CCccEEEEecCCCCChhhhc-CCcc--------------cH-HHHHHHHhc--CCCCCcE
Q 039565            6 RNKLTGPLLVELIGK-----QKNNALELGFRGNPELVDQQ-GKEE--------------VC-CPGLEYLHQ--GLKHPII   62 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-----~~~~~lv~e~~~~~~L~~~~-~~~~--------------~i-~~~l~~Lh~--~~~~~i~   62 (188)
                      +++..|+++.....-     ....+..++|+.+|.+.+.+ +...              ++ ..+..-+|+  ......+
T Consensus      1283 ~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg~T~v 1362 (2724)
T KOG1826|consen 1283 LREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNLGNTNV 1362 (2724)
T ss_pred             hhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccCCccch
Confidence            455788887766544     66778899999999999998 2221              22 223333332  1124568


Q ss_pred             EeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccc
Q 039565           63 QRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTV  136 (188)
Q Consensus        63 h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~  136 (188)
                      |+++++.|.++..+-.++++++|+.++..  ..........+++.|+.++      ++.++|+|..|+-+|....|..+|
T Consensus      1363 ~~~Lkf~lpmIVtny~v~~gk~gLdKIkn--p~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~~n~~f 1440 (2724)
T KOG1826|consen 1363 SKSLKFTLPMIVTNYNVKLGKGGLDKIKN--PVLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSDGNAYF 1440 (2724)
T ss_pred             hhhhhhhccceecCCcccccccccccccC--chHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhcccHHH
Confidence            99999999999999999999999988321  1112223345666666665      677799999999999888877644

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=93.39  E-value=0.087  Score=41.75  Aligned_cols=63  Identities=16%  Similarity=0.208  Sum_probs=46.9

Q ss_pred             CCccEEEEecCCCCChhhhc--CCcc----cHHHHHHHHhcCCCCCcEEeCCCCCcEEEccCCceEEecccC
Q 039565           21 QKNNALELGFRGNPELVDQQ--GKEE----VCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQ   86 (188)
Q Consensus        21 ~~~~~lv~e~~~~~~L~~~~--~~~~----~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~   86 (188)
                      .+..++|||++.+..|...-  ...+    .+..-+--|-.   +|+||||.+-=||++.+++.++++||--
T Consensus       180 ~~RH~Vvmelv~g~Pl~~v~~v~d~~~ly~~lm~~Iv~la~---~GlIHgDFNEFNimv~dd~~i~vIDFPQ  248 (465)
T KOG2268|consen  180 HNRHCVVMELVDGYPLRQVRHVEDPPTLYDDLMGLIVRLAN---HGLIHGDFNEFNIMVKDDDKIVVIDFPQ  248 (465)
T ss_pred             ccceeeHHHhhcccceeeeeecCChHHHHHHHHHHHHHHHH---cCceecccchheeEEecCCCEEEeechH
Confidence            45678999999988876655  2222    33333334555   8999999999999999999999999953

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=92.79  E-value=0.075  Score=39.01  Aligned_cols=31  Identities=23%  Similarity=0.406  Sum_probs=21.4

Q ss_pred             CCCcEEeCCCCCcEEEc-cCCceEEecccCcc
Q 039565           58 KHPIIQRDMKSTNILLN-EKVQAKLADFGQSR   88 (188)
Q Consensus        58 ~~~i~h~dl~~~nill~-~~~~~kl~d~~~~~   88 (188)
                      ...++|+|+.+.||+++ .++.+.+.||+.+.
T Consensus       165 ~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~  196 (239)
T PF01636_consen  165 PPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG  196 (239)
T ss_dssp             CEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred             CcEEEEeccccccceeeeccceeEEEecccce
Confidence            36799999999999999 55666899998664

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>PRK05231 homoserine kinase; Provisional

Probab=92.73  E-value=0.098  Score=40.92  Aligned_cols=31  Identities=19%  Similarity=0.273  Sum_probs=26.4

Q ss_pred             CCCcEEeCCCCCcEEEccCCceEEecccCcc
Q 039565           58 KHPIIQRDMKSTNILLNEKVQAKLADFGQSR   88 (188)
Q Consensus        58 ~~~i~h~dl~~~nill~~~~~~kl~d~~~~~   88 (188)
                      ..+++|+|+.+.|++++.+....+.||+.+.
T Consensus       186 p~~liHgD~~~~Nil~~~~~~~~iIDf~~~~  216 (319)
T PRK05231        186 PRGVIHADLFRDNVLFEGDRLSGFIDFYFAC  216 (319)
T ss_pred             CcccCCCCCCCCcEEEECCceEEEEeccccc
Confidence            3589999999999999976666899998765

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=91.98  E-value=0.14  Score=38.00  Aligned_cols=30  Identities=30%  Similarity=0.390  Sum_probs=26.1

Q ss_pred             CCcEEeCCCCCcEEEcc-CCceEEecccCcc
Q 039565           59 HPIIQRDMKSTNILLNE-KVQAKLADFGQSR   88 (188)
Q Consensus        59 ~~i~h~dl~~~nill~~-~~~~kl~d~~~~~   88 (188)
                      .+++|+|+.+.||+++. ++.+.+.||..+.
T Consensus       170 ~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~  200 (235)
T cd05157         170 IVFCHNDLLSGNIIYNEEKNSVKFIDYEYAG  200 (235)
T ss_pred             EEEEcCCCCcCcEEEeCCCCCEEEEEcccCC
Confidence            46899999999999998 5789999998665

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=91.83  E-value=0.14  Score=39.59  Aligned_cols=30  Identities=20%  Similarity=0.301  Sum_probs=26.5

Q ss_pred             CCcEEeCCCCCcEEEccCCceEEecccCcc
Q 039565           59 HPIIQRDMKSTNILLNEKVQAKLADFGQSR   88 (188)
Q Consensus        59 ~~i~h~dl~~~nill~~~~~~kl~d~~~~~   88 (188)
                      .+++|+|+.|.|++++.++...+.||+.+.
T Consensus       175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~  204 (296)
T cd05153         175 RGVIHADLFRDNVLFDGDELSGVIDFYFAC  204 (296)
T ss_pred             CcCCccCcCcccEEEeCCceEEEeehhhhc
Confidence            579999999999999998778899998765

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=91.83  E-value=0.15  Score=38.26  Aligned_cols=30  Identities=17%  Similarity=0.222  Sum_probs=26.0

Q ss_pred             CCcEEeCCCCCcEEEccCCceEEecccCcc
Q 039565           59 HPIIQRDMKSTNILLNEKVQAKLADFGQSR   88 (188)
Q Consensus        59 ~~i~h~dl~~~nill~~~~~~kl~d~~~~~   88 (188)
                      ..++|+|+.|.|++++.+....|.||+.+.
T Consensus       163 ~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~  192 (244)
T cd05150         163 LVVTHGDACLPNIIVDPGKFSGFIDLGRLG  192 (244)
T ss_pred             eEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence            458999999999999997778899998664

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=91.70  E-value=0.16  Score=39.64  Aligned_cols=31  Identities=19%  Similarity=0.287  Sum_probs=27.2

Q ss_pred             CCCcEEeCCCCCcEEEccCCceEEecccCcc
Q 039565           58 KHPIIQRDMKSTNILLNEKVQAKLADFGQSR   88 (188)
Q Consensus        58 ~~~i~h~dl~~~nill~~~~~~kl~d~~~~~   88 (188)
                      ..+++|+|+.+.|++++.++...+.||+.+.
T Consensus       186 ~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~  216 (307)
T TIGR00938       186 PRGVIHADLFPDNVLFDGDSVKGVIDFYFAC  216 (307)
T ss_pred             CCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence            3689999999999999988877899998764

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=91.68  E-value=0.19  Score=38.94  Aligned_cols=31  Identities=26%  Similarity=0.307  Sum_probs=27.0

Q ss_pred             CCCcEEeCCCCCcEEEccC----CceEEecccCcc
Q 039565           58 KHPIIQRDMKSTNILLNEK----VQAKLADFGQSR   88 (188)
Q Consensus        58 ~~~i~h~dl~~~nill~~~----~~~kl~d~~~~~   88 (188)
                      ...+.|+|+.+.||+++.+    +.+.+.||+.+.
T Consensus       178 ~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~  212 (302)
T cd05156         178 PVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYAS  212 (302)
T ss_pred             CceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCC
Confidence            4678999999999999974    789999998765

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=91.49  E-value=0.2  Score=37.37  Aligned_cols=29  Identities=17%  Similarity=0.257  Sum_probs=25.2

Q ss_pred             CCcEEeCCCCCcEEEccCCceEEecccCcc
Q 039565           59 HPIIQRDMKSTNILLNEKVQAKLADFGQSR   88 (188)
Q Consensus        59 ~~i~h~dl~~~nill~~~~~~kl~d~~~~~   88 (188)
                      ..++|+|+.|.|+++++++ +.+.||+.+.
T Consensus       153 ~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~  181 (226)
T TIGR02172       153 STCLHGDFQIGNLITSGKG-TYWIDLGDFG  181 (226)
T ss_pred             CceEecCCCCCcEEEcCCC-cEEEechhcC
Confidence            3568999999999999888 9999998664

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PRK10271 thiK thiamine kinase; Provisional

Probab=91.21  E-value=0.24  Score=35.92  Aligned_cols=29  Identities=14%  Similarity=0.229  Sum_probs=25.0

Q ss_pred             CCcEEeCCCCCcEEEccCCceEEecccCcc
Q 039565           59 HPIIQRDMKSTNILLNEKVQAKLADFGQSR   88 (188)
Q Consensus        59 ~~i~h~dl~~~nill~~~~~~kl~d~~~~~   88 (188)
                      ....|+|+.|.|+++++++ ++++||+.+.
T Consensus        77 ~~p~H~D~~~~N~~~~~~~-~~lIDwe~a~  105 (188)
T PRK10271         77 LAPLHMDVHAGNLVHSASG-LRLIDWEYAG  105 (188)
T ss_pred             eeeecCCCCCccEEEECCC-EEEEeCCccc
Confidence            4569999999999998877 8899998765

>TIGR02721 ycfN_thiK thiamine kinase

Probab=91.16  E-value=0.2  Score=37.95  Aligned_cols=29  Identities=17%  Similarity=0.283  Sum_probs=25.0

Q ss_pred             CCcEEeCCCCCcEEEccCCceEEecccCcc
Q 039565           59 HPIIQRDMKSTNILLNEKVQAKLADFGQSR   88 (188)
Q Consensus        59 ~~i~h~dl~~~nill~~~~~~kl~d~~~~~   88 (188)
                      ..++|+|+.|.|++++.++ +.+.||+.+.
T Consensus       146 ~~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~  174 (256)
T TIGR02721       146 LAPLHMDVHAYNLVVTPQG-LKLIDWEYAS  174 (256)
T ss_pred             CeeecCCCCcCcEEEeCCC-CEEEeccccC
Confidence            3589999999999999876 7899998765

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=89.96  E-value=0.32  Score=37.49  Aligned_cols=31  Identities=19%  Similarity=0.536  Sum_probs=25.5

Q ss_pred             CCcEEeCCCCCcEEEccCCc-eEEecccCccc
Q 039565           59 HPIIQRDMKSTNILLNEKVQ-AKLADFGQSRI   89 (188)
Q Consensus        59 ~~i~h~dl~~~nill~~~~~-~kl~d~~~~~~   89 (188)
                      ..++|+|+.+.|++++.++. ..+.||+.+..
T Consensus       185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i  216 (276)
T cd05152         185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKV  216 (276)
T ss_pred             CeeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence            46899999999999997554 57999987653

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=89.14  E-value=0.49  Score=37.35  Aligned_cols=31  Identities=10%  Similarity=0.324  Sum_probs=27.9

Q ss_pred             CCcEEeCCCCCcEEEccCCceEEecccCccc
Q 039565           59 HPIIQRDMKSTNILLNEKVQAKLADFGQSRI   89 (188)
Q Consensus        59 ~~i~h~dl~~~nill~~~~~~kl~d~~~~~~   89 (188)
                      ..++|+|..+.|++++......+.||+.+..
T Consensus       198 ~~lvHGD~~~gNlii~~~~~~gVlDwe~~~l  228 (321)
T COG3173         198 PVLVHGDYRPGNLIIDPGRPTGVLDWELATL  228 (321)
T ss_pred             ceeeeCCcccCCEEEeCCCeeEEEecccccc
Confidence            4689999999999999988899999998764

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=88.78  E-value=0.42  Score=36.76  Aligned_cols=30  Identities=23%  Similarity=0.309  Sum_probs=27.0

Q ss_pred             CcEEeCCCCCcEEEccCCceEEecccCccc
Q 039565           60 PIIQRDMKSTNILLNEKVQAKLADFGQSRI   89 (188)
Q Consensus        60 ~i~h~dl~~~nill~~~~~~kl~d~~~~~~   89 (188)
                      .+.|+|+.+.|++.++.+.+.|+||.-+..
T Consensus       154 v~cH~Dl~~~N~l~t~~~~l~LIDWEyAg~  183 (269)
T COG0510         154 VPCHNDLNPGNLLLTDKGGLFLIDWEYAGL  183 (269)
T ss_pred             eeecCCCCccceEEcCCCcEEEEecccCCC
Confidence            589999999999999999999999987653

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=88.63  E-value=0.43  Score=37.02  Aligned_cols=29  Identities=24%  Similarity=0.361  Sum_probs=24.8

Q ss_pred             CCcEEeCCCCCcEEEccCCceEEecccCcc
Q 039565           59 HPIIQRDMKSTNILLNEKVQAKLADFGQSR   88 (188)
Q Consensus        59 ~~i~h~dl~~~nill~~~~~~kl~d~~~~~   88 (188)
                      .+++|+|+.+.|++++. +.+.+.||+.+.
T Consensus       187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~  215 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCT  215 (313)
T ss_pred             CceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence            57899999999999987 567899998654

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=88.47  E-value=0.44  Score=37.79  Aligned_cols=28  Identities=25%  Similarity=0.595  Sum_probs=25.1

Q ss_pred             cEEeCCCCCcEEEccCCc-eEEecccCcc
Q 039565           61 IIQRDMKSTNILLNEKVQ-AKLADFGQSR   88 (188)
Q Consensus        61 i~h~dl~~~nill~~~~~-~kl~d~~~~~   88 (188)
                      ++|+|+.|.|++++.+.. ..+.||+-+.
T Consensus       199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa~  227 (331)
T COG2334         199 IIHGDLHPDNVLFDDDTDVSGFIDFDDAG  227 (331)
T ss_pred             eeecCCCccceeEcCCCCeeeEEEccccc
Confidence            999999999999999874 8899998765

>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain

Probab=88.39  E-value=0.45  Score=34.60  Aligned_cols=30  Identities=23%  Similarity=0.326  Sum_probs=24.8

Q ss_pred             CCcEEeCCCCCcEEEccCC-----ceEEecccCcc
Q 039565           59 HPIIQRDMKSTNILLNEKV-----QAKLADFGQSR   88 (188)
Q Consensus        59 ~~i~h~dl~~~nill~~~~-----~~kl~d~~~~~   88 (188)
                      ..+.|||+.+.|+++..++     .+.+.||..+.
T Consensus       120 ~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~  154 (196)
T smart00587      120 NVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSH  154 (196)
T ss_pred             eEEeeCCCCccceeeccCCCCCccceEEEecccCC
Confidence            5789999999999997543     57899998765

subfamily of choline kinases

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=87.90  E-value=0.38  Score=35.26  Aligned_cols=30  Identities=30%  Similarity=0.441  Sum_probs=20.9

Q ss_pred             CCcEEeCCCCCcEEE-ccCCceEEecccCcc
Q 039565           59 HPIIQRDMKSTNILL-NEKVQAKLADFGQSR   88 (188)
Q Consensus        59 ~~i~h~dl~~~nill-~~~~~~kl~d~~~~~   88 (188)
                      ....|+|+.+.||++ +.++.++++||..+.
T Consensus       143 ~v~cHnDl~~~Nil~~~~~~~~~lIDfEya~  173 (211)
T PF01633_consen  143 LVFCHNDLNPGNILINNKDGEVKLIDFEYAG  173 (211)
T ss_dssp             EEEE-S--SGGGEEETSSSSCEEE--GTT-E
T ss_pred             ceEeeccCccccEEeccCCCeEEEecHHHHh
Confidence            467899999999999 788899999998765

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=85.81  E-value=1.4  Score=36.01  Aligned_cols=30  Identities=17%  Similarity=0.340  Sum_probs=25.5

Q ss_pred             CCCcEEeCCCCCcEEEccCCceEEecccCcc
Q 039565           58 KHPIIQRDMKSTNILLNEKVQAKLADFGQSR   88 (188)
Q Consensus        58 ~~~i~h~dl~~~nill~~~~~~kl~d~~~~~   88 (188)
                      ...++|||+.+.||++..+ .+++.||..+.
T Consensus       222 ~~~l~HgDl~~gni~~~~~-~~~viD~E~a~  251 (401)
T PRK09550        222 AEALLHGDLHTGSIFVTEE-ETKVIDPEFAF  251 (401)
T ss_pred             CCceeeccCCcccEEeeCC-CcEEEeccccc
Confidence            3679999999999999876 58899998665

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=85.15  E-value=0.55  Score=36.65  Aligned_cols=30  Identities=10%  Similarity=0.294  Sum_probs=27.0

Q ss_pred             CCcEEeCCCCCcEEEccCCceEEecccCcc
Q 039565           59 HPIIQRDMKSTNILLNEKVQAKLADFGQSR   88 (188)
Q Consensus        59 ~~i~h~dl~~~nill~~~~~~kl~d~~~~~   88 (188)
                      .+++|+|+.+.|++++.++...+.||..+.
T Consensus       196 ~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~  225 (309)
T TIGR02904       196 TVLVHGKLSLSHFLYDETRGGYFINFEKAS  225 (309)
T ss_pred             eeeeCCCCcHHhEEEcCCCCEEEEEhhhcc
Confidence            579999999999999998889999998765

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>PLN02236 choline kinase

Probab=85.13  E-value=0.91  Score=36.18  Aligned_cols=30  Identities=17%  Similarity=0.337  Sum_probs=25.8

Q ss_pred             CCcEEeCCCCCcEEEcc-CCceEEecccCcc
Q 039565           59 HPIIQRDMKSTNILLNE-KVQAKLADFGQSR   88 (188)
Q Consensus        59 ~~i~h~dl~~~nill~~-~~~~kl~d~~~~~   88 (188)
                      ..+.|+|+++.||+++. ++.+.+.||..+.
T Consensus       200 ~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~  230 (344)
T PLN02236        200 IGFCHNDLQYGNIMIDEETRAITIIDYEYAS  230 (344)
T ss_pred             ceEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence            46899999999999986 4679999998765

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=85.07  E-value=1.9  Score=31.81  Aligned_cols=54  Identities=30%  Similarity=0.335  Sum_probs=39.5

Q ss_pred             cEEEEecCCCCChhhhc-CCcccHHHHHHHHhcCCCCCcEEeCCCCCcEEEccCCceEEecccCc
Q 039565           24 NALELGFRGNPELVDQQ-GKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQS   87 (188)
Q Consensus        24 ~~lv~e~~~~~~L~~~~-~~~~~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~   87 (188)
                      ..+|.||.+...  ..- ....++.+-+..+|.   .+|+-+|+++.|..     .-+++|||.+
T Consensus       152 ~aIVKD~v~~~~--~~~~~~~~~~~~dl~~~~k---~gI~~~Dv~~~ny~-----~G~lvDfs~~  206 (207)
T PF13095_consen  152 RAIVKDFVPDDP--PLQIRDIPQMLRDLKILHK---LGIVPRDVKPRNYR-----GGKLVDFSSS  206 (207)
T ss_pred             EEEEEeecCCcc--ccchhHHHHHHHHHHHHHH---CCeeeccCcccccc-----CCEEEecccC
Confidence            367888887544  111 333388888999998   99999999999976     4477888743

>PRK06148 hypothetical protein; Provisional

Probab=82.78  E-value=1.1  Score=41.03  Aligned_cols=31  Identities=29%  Similarity=0.504  Sum_probs=25.5

Q ss_pred             CCCcEEeCCCCCcEEEccCC--c-eEEecccCcc
Q 039565           58 KHPIIQRDMKSTNILLNEKV--Q-AKLADFGQSR   88 (188)
Q Consensus        58 ~~~i~h~dl~~~nill~~~~--~-~kl~d~~~~~   88 (188)
                      ..++||+|+++.||+++.++  . ..|.|||-+.
T Consensus       202 p~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~  235 (1013)
T PRK06148        202 PAQVIHNDANDYNILVDADDGERISGLIDFGDAV  235 (1013)
T ss_pred             CcceECCCCCcccEEEcCCCCcceEEEEECcccc
Confidence            35799999999999999775  3 4699998765

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=82.76  E-value=2  Score=34.60  Aligned_cols=30  Identities=20%  Similarity=0.304  Sum_probs=24.7

Q ss_pred             CCCcEEeCCCCCcEEEccCCceEEecccCcc
Q 039565           58 KHPIIQRDMKSTNILLNEKVQAKLADFGQSR   88 (188)
Q Consensus        58 ~~~i~h~dl~~~nill~~~~~~kl~d~~~~~   88 (188)
                      ...++|||+.+.||+++.++ .++.|+..+.
T Consensus       191 ~~~llHGDl~~gNi~~~~~~-~~~iD~e~~~  220 (370)
T TIGR01767       191 AETLLHGDLHSGSIFVSEHE-TKVIDPEFAF  220 (370)
T ss_pred             cceeeeccCCcccEEEcCCC-CEEEcCcccc
Confidence            36899999999999997764 6788987654

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=82.05  E-value=2.2  Score=32.40  Aligned_cols=37  Identities=14%  Similarity=0.155  Sum_probs=25.0

Q ss_pred             HHHHHHHHhcCCC--CCcEEeCCCCCcEEEccCCceEEec
Q 039565           46 CCPGLEYLHQGLK--HPIIQRDMKSTNILLNEKVQAKLAD   83 (188)
Q Consensus        46 i~~~l~~Lh~~~~--~~i~h~dl~~~nill~~~~~~kl~d   83 (188)
                      ++..+.-+-..++  ...+|+||...|.+...+| +.+-|
T Consensus       172 ~~~~v~elL~~hqpqPsLlHGDLW~gN~a~~~~G-Pv~fD  210 (286)
T COG3001         172 IVEKIQELLADHQPQPSLLHGDLWSGNCAFGKDG-PVIFD  210 (286)
T ss_pred             HHHHHHHHHhcCCCCcceeecccccccccccCCC-Ceeec
Confidence            3444444443332  5789999999999998888 55544

>PRK12396 5-methylribose kinase; Reviewed

Probab=80.32  E-value=2.4  Score=34.66  Aligned_cols=30  Identities=13%  Similarity=0.302  Sum_probs=25.1

Q ss_pred             CCCcEEeCCCCCcEEEccCCceEEecccCcc
Q 039565           58 KHPIIQRDMKSTNILLNEKVQAKLADFGQSR   88 (188)
Q Consensus        58 ~~~i~h~dl~~~nill~~~~~~kl~d~~~~~   88 (188)
                      ....+|||+.|.||+++.+ ..|+.|..++.
T Consensus       226 ~~aLlHGDlHtGSI~v~~~-~~kvIDpEFAf  255 (409)
T PRK12396        226 AQALIHGDLHTGSVFVKND-STKVIDPEFAF  255 (409)
T ss_pred             chhhccCcCCCCCEEecCC-ceEEEcccccc
Confidence            4789999999999999986 58888876654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	188
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		6e-14
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		9e-14
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		4e-13
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		5e-13
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		6e-13
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		3e-12
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		6e-12
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		2e-11
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		3e-09
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		5e-09
4h58_A	275	Braf In Complex With Compound 3 Length = 275		5e-09
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		5e-09
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		5e-09
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		5e-09
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		5e-09
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		5e-09
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		6e-09
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		1e-08
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		2e-08
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		3e-08
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		3e-08
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		3e-08
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		3e-08
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		4e-08
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		4e-08
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		4e-08
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		4e-08
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		4e-08
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		4e-08
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		4e-08
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		4e-08
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		5e-08
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		5e-08
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		5e-08
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		6e-08
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		6e-08
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		6e-08
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		6e-08
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		6e-08
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		6e-08
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		6e-08
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		6e-08
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		7e-08
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		7e-08
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		7e-08
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		2e-07
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		3e-07
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		4e-07
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		7e-07
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		8e-07
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		2e-06
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		2e-06
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		2e-06
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		4e-06
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		5e-06
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		5e-06
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		6e-06
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		7e-06
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		7e-06
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		7e-06
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		7e-06
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		1e-05
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		1e-05
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		1e-05
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		1e-05
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		1e-05
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		2e-05
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		2e-05
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		2e-05
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		2e-05
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		2e-05
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		2e-05
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		2e-05
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		2e-05
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		2e-05
3g51_A	325	Structural Diversity Of The Active Conformation Of		2e-05
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		2e-05
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		2e-05
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		2e-05
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		2e-05
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		2e-05
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		2e-05
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		2e-05
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		2e-05
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		2e-05
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		2e-05
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		2e-05
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		2e-05
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		2e-05
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		3e-05
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		3e-05
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		3e-05
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		3e-05
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		3e-05
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		3e-05
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		3e-05
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		3e-05
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		3e-05
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		3e-05
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		3e-05
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		4e-05
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		4e-05
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		4e-05
3a4o_X	286	Lyn Kinase Domain Length = 286		4e-05
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		4e-05
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		4e-05
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		4e-05
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		4e-05
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		4e-05
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		5e-05
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		5e-05
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		5e-05
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		5e-05
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		5e-05
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		5e-05
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		5e-05
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		5e-05
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		5e-05
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		5e-05
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		5e-05
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		5e-05
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		5e-05
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		5e-05
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		5e-05
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		5e-05
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		6e-05
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		6e-05
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		6e-05
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		6e-05
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		6e-05
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		6e-05
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		6e-05
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		6e-05
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		6e-05
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		6e-05
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		6e-05
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		6e-05
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		7e-05
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		7e-05
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		8e-05
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		8e-05
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		8e-05
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		9e-05
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		9e-05
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		9e-05
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		9e-05
2pl0_A	289	Lck Bound To Imatinib Length = 289		9e-05
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		9e-05
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		9e-05
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		9e-05
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		9e-05
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		1e-04
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		1e-04
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		1e-04
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		1e-04
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		1e-04
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		1e-04
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		1e-04
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		1e-04
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		1e-04
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		1e-04
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		1e-04
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		1e-04
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		1e-04
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		1e-04
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		1e-04
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		1e-04
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		1e-04
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		1e-04
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		1e-04
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		1e-04
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		1e-04
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		1e-04
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		1e-04
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		1e-04
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		1e-04
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		1e-04
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		1e-04
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		1e-04
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		2e-04
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		2e-04
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		2e-04
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		2e-04
3hec_A	348	P38 In Complex With Imatinib Length = 348		2e-04
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		2e-04
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		2e-04
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		2e-04
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		2e-04
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		2e-04
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		2e-04
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		2e-04
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		2e-04
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		2e-04
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		2e-04
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		2e-04
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		2e-04
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		2e-04
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		2e-04
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		2e-04
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		2e-04
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		2e-04
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		2e-04
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		2e-04
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		2e-04
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		2e-04
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		2e-04
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		2e-04
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		2e-04
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		2e-04
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		2e-04
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		2e-04
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		2e-04
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		2e-04
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		2e-04
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		2e-04
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		2e-04
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		2e-04
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		2e-04
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		2e-04
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		2e-04
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		2e-04
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		2e-04
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		2e-04
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		2e-04
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		2e-04
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		2e-04
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		2e-04
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		2e-04
2oza_B	366	Structure Of P38alpha Complex Length = 366		2e-04
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		2e-04
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		2e-04
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		2e-04
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		2e-04
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		2e-04
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		2e-04
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		2e-04
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		2e-04
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		2e-04
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		2e-04
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		2e-04
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		2e-04
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		2e-04
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		2e-04
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		2e-04
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		2e-04
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		2e-04
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		2e-04
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		2e-04
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		2e-04
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		2e-04
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		2e-04
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		2e-04
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		2e-04
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		2e-04
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		2e-04
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		2e-04
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		2e-04
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		2e-04
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		2e-04
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		2e-04
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		2e-04
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		2e-04
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		2e-04
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		2e-04
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		2e-04
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		2e-04
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		2e-04
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		2e-04
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		2e-04
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		2e-04
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		2e-04
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		2e-04
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		2e-04
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		2e-04
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		2e-04
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		2e-04
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		2e-04
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		2e-04
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		2e-04
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		2e-04
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		3e-04
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		3e-04
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		3e-04
3a7f_A	303	Human Mst3 Kinase Length = 303		3e-04
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		3e-04
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		3e-04
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		3e-04
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		3e-04
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		3e-04
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		3e-04
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		3e-04
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		3e-04
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		3e-04
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		3e-04
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		3e-04
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		3e-04
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		3e-04
1fvr_A	327	Tie2 Kinase Domain Length = 327		3e-04
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		3e-04
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		3e-04
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		3e-04
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		3e-04
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		3e-04
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		3e-04
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		3e-04
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		3e-04
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		3e-04
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		3e-04
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		3e-04
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		3e-04
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		3e-04
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		3e-04
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		3e-04
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		3e-04
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		3e-04
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		3e-04
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		3e-04
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		3e-04
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		3e-04
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		3e-04
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		3e-04
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		3e-04
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		3e-04
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		4e-04
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		4e-04
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		4e-04
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		4e-04
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		4e-04
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		4e-04
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		4e-04
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		4e-04
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		4e-04
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		4e-04
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		4e-04
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		4e-04
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		4e-04
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		4e-04
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		4e-04
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		4e-04
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		4e-04
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		4e-04
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		4e-04
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		4e-04
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		4e-04
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		4e-04
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		4e-04
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		5e-04
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		5e-04
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		5e-04
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		5e-04
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		5e-04
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		5e-04
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		5e-04
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		5e-04
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		5e-04
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		5e-04
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		5e-04
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		5e-04
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		5e-04
2qlu_A	314	Crystal Structure Of Activin Receptor Type Ii Kinas		5e-04
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		5e-04
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		5e-04
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		5e-04
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		5e-04
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		5e-04
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		6e-04
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		6e-04
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		6e-04
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		6e-04
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		6e-04
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		6e-04
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		6e-04
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		6e-04
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		6e-04
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		6e-04
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		6e-04
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		6e-04
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		6e-04
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		6e-04
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		6e-04
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		6e-04
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		6e-04
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		6e-04
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		6e-04
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		6e-04
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		6e-04
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		6e-04
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		6e-04
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		6e-04
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		6e-04
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		7e-04
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		7e-04
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		7e-04
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		7e-04
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		7e-04
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		7e-04
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		7e-04
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		7e-04
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		7e-04
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		7e-04
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		7e-04
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		7e-04
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		7e-04
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		7e-04
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		7e-04
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		7e-04
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		7e-04
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		7e-04
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		7e-04
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		7e-04
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		7e-04
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		8e-04
3b2t_A	311	Structure Of Phosphotransferase Length = 311		8e-04
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		8e-04
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		8e-04
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		8e-04
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		8e-04
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		8e-04
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		8e-04
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		8e-04
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		8e-04
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		8e-04
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		8e-04
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		9e-04
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		9e-04
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		9e-04
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		9e-04
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		9e-04
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		9e-04
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		9e-04
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		9e-04
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		9e-04

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 73.6 bits (179), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 79/166 (47%), Gaps = 34/166 (20%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G+ +LH+      I RD+KS NILL+E   AK++DFG +R S     T M + I GT  +
Sbjct: 145 GINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAY 201
Query: 109 -----LNTELTEKSDVDSFEIVILEIITGILTVDLSFKGEF------------------- 144
                L  E+T KSD+ SF +V+LEIITG+  VD   + +                    
Sbjct: 202 MAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYI 261
Query: 145 -------DIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS 183
                  D  SVE    +A   +  K N+RP + +V  + ++ + S
Sbjct: 262 DKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 72.8 bits (177), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 78/166 (46%), Gaps = 34/166 (20%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G+ +LH+      I RD+KS NILL+E   AK++DFG +R S     T M   I GT  +
Sbjct: 145 GINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAY 201
Query: 109 -----LNTELTEKSDVDSFEIVILEIITGILTVDLSFKGEF------------------- 144
                L  E+T KSD+ SF +V+LEIITG+  VD   + +                    
Sbjct: 202 MAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYI 261
Query: 145 -------DIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS 183
                  D  SVE    +A   +  K N+RP + +V  + ++ + S
Sbjct: 262 DKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 70.9 bits (172), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 77/166 (46%), Gaps = 34/166 (20%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G+ +LH+      I RD+KS NILL+E   AK++DFG +R S       M   I GT  +
Sbjct: 139 GINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAY 195
Query: 109 -----LNTELTEKSDVDSFEIVILEIITGILTVDLSFKGEF------------------- 144
                L  E+T KSD+ SF +V+LEIITG+  VD   + +                    
Sbjct: 196 MAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYI 255
Query: 145 -------DIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS 183
                  D  SVE    +A   +  K N+RP + +V  + ++ + S
Sbjct: 256 DKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 301

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 70.9 bits (172), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 12/98 (12%)
Query: 44  EVC---CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMST 100
           E+C     GL YLH      II RD+KS NILL+E    K+ DFG S+     G TH+  
Sbjct: 143 EICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXX 199
Query: 101 TIAGTAGFLNTE------LTEKSDVDSFEIVILEIITG 132
            + GT G+++ E      LTEKSDV SF +V+ E++  
Sbjct: 200 VVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCA 237

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 70.5 bits (171), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 77/166 (46%), Gaps = 34/166 (20%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G+ +LH+      I RD+KS NILL+E   AK++DFG +R S         + I GT  +
Sbjct: 136 GINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAY 192
Query: 109 -----LNTELTEKSDVDSFEIVILEIITGILTVDLSFKGEF------------------- 144
                L  E+T KSD+ SF +V+LEIITG+  VD   + +                    
Sbjct: 193 XAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYI 252
Query: 145 -------DIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS 183
                  D  SVE    +A   +  K N+RP + +V  + ++ + S
Sbjct: 253 DKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQEXTAS 298

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 67.8 bits (164), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 54/98 (55%), Gaps = 12/98 (12%)
Query: 44  EVC---CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMST 100
           E+C     GL YLH      II RD+KS NILL+E    K+ DFG S+       TH+  
Sbjct: 143 EICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXX 199
Query: 101 TIAGTAGFLNTE------LTEKSDVDSFEIVILEIITG 132
            + GT G+++ E      LTEKSDV SF +V+ E++  
Sbjct: 200 VVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCA 237

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 67.0 bits (162), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 79/170 (46%), Gaps = 38/170 (22%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL YLH      II RD+K+ NILL+E+ +A + DFG +++   +   H+   + GT G 
Sbjct: 151 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-XHVXXAVRGTIGH 209
Query: 109 LNTEL------TEKSDVDSFEIVILEIITGILTVDLS----------------------- 139
           +  E       +EK+DV  + +++LE+ITG    DL+                       
Sbjct: 210 IAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 269
Query: 140 -------FKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG 182
                   +G +    VE+ +++A+    S    RP M++VV + E G G
Sbjct: 270 EALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE-GDG 318

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 78/170 (45%), Gaps = 38/170 (22%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL YLH      II RD+K+ NILL+E+ +A + DFG +++   +   H+   + G  G 
Sbjct: 143 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-XHVXXAVRGXIGH 201
Query: 109 LNTEL------TEKSDVDSFEIVILEIITGILTVDLS----------------------- 139
           +  E       +EK+DV  + +++LE+ITG    DL+                       
Sbjct: 202 IAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 261
Query: 140 -------FKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG 182
                   +G +    VE+ +++A+    S    RP M++VV + E G G
Sbjct: 262 EALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE-GDG 310

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 54/90 (60%), Gaps = 11/90 (12%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMST-TIAGTAG 107
           G+ YLH     PI+ R++KS N+L+++K   K+ DFG SR+   +  T +S+ + AGT  
Sbjct: 149 GMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL---KASTFLSSKSAAGTPE 204
Query: 108 FLNTEL------TEKSDVDSFEIVILEIIT 131
           ++  E+       EKSDV SF +++ E+ T
Sbjct: 205 WMAPEVLRDEPSNEKSDVYSFGVILWELAT 234

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 12/95 (12%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G++YLH      II RD+KS NI L+E +  K+ DFG + +     G+H    ++G+  +
Sbjct: 143 GMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 199
Query: 109 LNTELTE---------KSDVDSFEIVILEIITGIL 134
           +  E+           +SDV +F IV+ E++TG L
Sbjct: 200 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 234

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 12/95 (12%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G++YLH      II RD+KS NI L+E +  K+ DFG + +     G+H    ++G+  +
Sbjct: 116 GMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 172
Query: 109 LNTELTE---------KSDVDSFEIVILEIITGIL 134
           +  E+           +SDV +F IV+ E++TG L
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 207

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 12/95 (12%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G++YLH      II RD+KS NI L+E +  K+ DFG + +     G+H    ++G+  +
Sbjct: 121 GMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 177
Query: 109 LNTELTE---------KSDVDSFEIVILEIITGIL 134
           +  E+           +SDV +F IV+ E++TG L
Sbjct: 178 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 212

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 12/95 (12%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G++YLH      II RD+KS NI L+E +  K+ DFG + +     G+H    ++G+  +
Sbjct: 118 GMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 174
Query: 109 LNTELTE---------KSDVDSFEIVILEIITGIL 134
           +  E+           +SDV +F IV+ E++TG L
Sbjct: 175 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 209

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 12/95 (12%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G++YLH      II RD+KS NI L+E +  K+ DFG + +     G+H    ++G+  +
Sbjct: 144 GMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 200
Query: 109 LNTELTE---------KSDVDSFEIVILEIITGIL 134
           +  E+           +SDV +F IV+ E++TG L
Sbjct: 201 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 235

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 12/95 (12%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G++YLH      II RD+KS NI L+E +  K+ DFG + +     G+H    ++G+  +
Sbjct: 116 GMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 172
Query: 109 LNTELTE---------KSDVDSFEIVILEIITGIL 134
           +  E+           +SDV +F IV+ E++TG L
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 207

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 12/95 (12%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G++YLH      II RD+KS NI L+E +  K+ DFG + +     G+H    ++G+  +
Sbjct: 121 GMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 177
Query: 109 LNTELTE---------KSDVDSFEIVILEIITGIL 134
           +  E+           +SDV +F IV+ E++TG L
Sbjct: 178 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 212

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 57.0 bits (136), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G+ YLH     PI+ RD+KS N+L+++K   K+ DFG SR+         S   AGT  +
Sbjct: 149 GMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLK--ASXFLXSKXAAGTPEW 205
Query: 109 LNTEL------TEKSDVDSFEIVILEIIT 131
           +  E+       EKSDV SF +++ E+ T
Sbjct: 206 MAPEVLRDEPSNEKSDVYSFGVILWELAT 234

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 12/95 (12%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G++YLH      II RD+KS NI L+E    K+ DFG + +     G+H    ++G+  +
Sbjct: 120 GMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 176
Query: 109 LNTELTE---------KSDVDSFEIVILEIITGIL 134
           +  E+           +SDV +F IV+ E++TG L
Sbjct: 177 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQL 211

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 26/149 (17%)
Query: 7   NKLTGPLLVELIGK-QKNNALELG--FRGNPELVDQQGK----EEVC--------CPGLE 51
           ++L  P  V+L    Q +  L  G  +  N EL+    K    +E C           LE
Sbjct: 84  SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 143
Query: 52  YLH-QGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLN 110
           YLH +G    II RD+K  NILLNE +  ++ DFG +++   E     + +  GTA +++
Sbjct: 144 YLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVS 199
Query: 111 TE-LTEK-----SDVDSFEIVILEIITGI 133
            E LTEK     SD+ +   +I +++ G+
Sbjct: 200 PELLTEKSACKSSDLWALGCIIYQLVAGL 228

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 12/95 (12%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G++YLH      II RD+KS NI L+E +  K+ DFG +       G+H    ++G+  +
Sbjct: 116 GMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 172
Query: 109 LNTELTE---------KSDVDSFEIVILEIITGIL 134
           +  E+           +SDV +F IV+ E++TG L
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 207

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 12/95 (12%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G++YLH      II RD+KS NI L+E +  K+ DFG +       G+H    ++G+  +
Sbjct: 144 GMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 200
Query: 109 LNTELTE---------KSDVDSFEIVILEIITGIL 134
           +  E+           +SDV +F IV+ E++TG L
Sbjct: 201 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 235

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 12/95 (12%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G++YLH      II RD+KS NI L+E +  K+ DFG +       G+H    ++G+  +
Sbjct: 136 GMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 192
Query: 109 LNTELTE---------KSDVDSFEIVILEIITGIL 134
           +  E+           +SDV +F IV+ E++TG L
Sbjct: 193 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 227

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 26/149 (17%)
Query: 7   NKLTGPLLVELIGK-QKNNALELG--FRGNPELVDQQGK----EEVCC--------PGLE 51
           ++L  P  V+L    Q +  L  G  +  N EL+    K    +E C           LE
Sbjct: 88  SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 147
Query: 52  YLH-QGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLN 110
           YLH +G    II RD+K  NILLNE +  ++ DFG +++   E     + +  GTA +++
Sbjct: 148 YLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVS 203
Query: 111 TE-LTEK-----SDVDSFEIVILEIITGI 133
            E LTEK     SD+ +   +I +++ G+
Sbjct: 204 PELLTEKSACKSSDLWALGCIIYQLVAGL 232

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 26/149 (17%)
Query: 7   NKLTGPLLVELIGK-QKNNALELG--FRGNPELVDQQGK----EEVC--------CPGLE 51
           ++L  P  V+L    Q +  L  G  +  N EL+    K    +E C           LE
Sbjct: 62  SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 121
Query: 52  YLH-QGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLN 110
           YLH +G    II RD+K  NILLNE +  ++ DFG +++   E     +    GTA +++
Sbjct: 122 YLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 177
Query: 111 TE-LTEK-----SDVDSFEIVILEIITGI 133
            E LTEK     SD+ +   +I +++ G+
Sbjct: 178 PELLTEKSACKSSDLWALGCIIYQLVAGL 206

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 26/149 (17%)
Query: 7   NKLTGPLLVELIGK-QKNNALELG--FRGNPELVDQQGK----EEVC--------CPGLE 51
           ++L  P  V+L    Q +  L  G  +  N EL+    K    +E C           LE
Sbjct: 69  SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 128
Query: 52  YLH-QGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLN 110
           YLH +G    II RD+K  NILLNE +  ++ DFG +++   E     +    GTA +++
Sbjct: 129 YLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 184
Query: 111 TE-LTEK-----SDVDSFEIVILEIITGI 133
            E LTEK     SD+ +   +I +++ G+
Sbjct: 185 PELLTEKSACKSSDLWALGCIIYQLVAGL 213

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 26/149 (17%)
Query: 7   NKLTGPLLVELIGK-QKNNALELG--FRGNPELVDQQGK----EEVC--------CPGLE 51
           ++L  P  V+L    Q +  L  G  +  N EL+    K    +E C           LE
Sbjct: 63  SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 122
Query: 52  YLH-QGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLN 110
           YLH +G    II RD+K  NILLNE +  ++ DFG +++   E     +    GTA +++
Sbjct: 123 YLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 178
Query: 111 TE-LTEK-----SDVDSFEIVILEIITGI 133
            E LTEK     SD+ +   +I +++ G+
Sbjct: 179 PELLTEKSACKSSDLWALGCIIYQLVAGL 207

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 26/149 (17%)
Query: 7   NKLTGPLLVELIGK-QKNNALELG--FRGNPELVDQQGK----EEVC--------CPGLE 51
           ++L  P  V+L    Q +  L  G  +  N EL+    K    +E C           LE
Sbjct: 84  SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 143
Query: 52  YLH-QGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLN 110
           YLH +G    II RD+K  NILLNE +  ++ DFG +++   E     +    GTA +++
Sbjct: 144 YLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 199
Query: 111 TE-LTEK-----SDVDSFEIVILEIITGI 133
            E LTEK     SD+ +   +I +++ G+
Sbjct: 200 PELLTEKSACKSSDLWALGCIIYQLVAGL 228

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 26/149 (17%)
Query: 7   NKLTGPLLVELIGK-QKNNALELG--FRGNPELVDQQGK----EEVCC--------PGLE 51
           ++L  P  V+L    Q +  L  G  +  N EL+    K    +E C           LE
Sbjct: 85  SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 144
Query: 52  YLH-QGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLN 110
           YLH +G    II RD+K  NILLNE +  ++ DFG +++   E     +    GTA +++
Sbjct: 145 YLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVS 200
Query: 111 TE-LTEK-----SDVDSFEIVILEIITGI 133
            E LTEK     SD+ +   +I +++ G+
Sbjct: 201 PELLTEKSACKSSDLWALGCIIYQLVAGL 229

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 26/149 (17%)
Query: 7   NKLTGPLLVELIGK-QKNNALELG--FRGNPELVDQQGK----EEVC--------CPGLE 51
           ++L  P  V+L    Q +  L  G  +  N EL+    K    +E C           LE
Sbjct: 64  SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 123
Query: 52  YLH-QGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLN 110
           YLH +G    II RD+K  NILLNE +  ++ DFG +++   E     +    GTA +++
Sbjct: 124 YLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 179
Query: 111 TE-LTEK-----SDVDSFEIVILEIITGI 133
            E LTEK     SD+ +   +I +++ G+
Sbjct: 180 PELLTEKSACKSSDLWALGCIIYQLVAGL 208

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 26/149 (17%)
Query: 7   NKLTGPLLVELIGK-QKNNALELG--FRGNPELVDQQGK----EEVCC--------PGLE 51
           ++L  P  V+L    Q +  L  G  +  N EL+    K    +E C           LE
Sbjct: 65  SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 124
Query: 52  YLH-QGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLN 110
           YLH +G    II RD+K  NILLNE +  ++ DFG +++   E     +    GTA +++
Sbjct: 125 YLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 180
Query: 111 TE-LTEK-----SDVDSFEIVILEIITGI 133
            E LTEK     SD+ +   +I +++ G+
Sbjct: 181 PELLTEKSACKSSDLWALGCIIYQLVAGL 209

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 11/92 (11%)
Query: 49  GLEYLH-QGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAG 107
            LEYLH +G    II RD+K  NILLNE +  ++ DFG +++   E     + +  GTA 
Sbjct: 144 ALEYLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 199
Query: 108 FLNTE-LTEK-----SDVDSFEIVILEIITGI 133
           +++ E LTEK     SD+ +   +I +++ G+
Sbjct: 200 YVSPELLTEKSASKSSDLWALGCIIYQLVAGL 231

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 53.9 bits (128), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 26/149 (17%)
Query: 7   NKLTGPLLVELIGK-QKNNALELG--FRGNPELVDQQGK----EEVCC--------PGLE 51
           ++L  P  V+L    Q +  L  G  +  N EL+    K    +E C           LE
Sbjct: 85  SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 144
Query: 52  YLH-QGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLN 110
           YLH +G    II RD+K  NILLNE +  ++ DFG +++   E     +    GTA +++
Sbjct: 145 YLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 200
Query: 111 TE-LTEK-----SDVDSFEIVILEIITGI 133
            E LTEK     SD+ +   +I +++ G+
Sbjct: 201 PELLTEKSACKSSDLWALGCIIYQLVAGL 229

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 53.9 bits (128), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 26/149 (17%)
Query: 7   NKLTGPLLVELIGK-QKNNALELG--FRGNPELVDQQGK----EEVCC--------PGLE 51
           ++L  P  V+L    Q +  L  G  +  N EL+    K    +E C           LE
Sbjct: 85  SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 144
Query: 52  YLH-QGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLN 110
           YLH +G    II RD+K  NILLNE +  ++ DFG +++   E     +    GTA +++
Sbjct: 145 YLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 200
Query: 111 TE-LTEK-----SDVDSFEIVILEIITGI 133
            E LTEK     SD+ +   +I +++ G+
Sbjct: 201 PELLTEKSACKSSDLWALGCIIYQLVAGL 229

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 53.9 bits (128), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 26/149 (17%)
Query: 7   NKLTGPLLVELIGK-QKNNALELG--FRGNPELVDQQGK----EEVCC--------PGLE 51
           ++L  P  V+L    Q +  L  G  +  N EL+    K    +E C           LE
Sbjct: 85  SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 144
Query: 52  YLH-QGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLN 110
           YLH +G    II RD+K  NILLNE +  ++ DFG +++   E     +    GTA +++
Sbjct: 145 YLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 200
Query: 111 TE-LTEK-----SDVDSFEIVILEIITGI 133
            E LTEK     SD+ +   +I +++ G+
Sbjct: 201 PELLTEKSACKSSDLWALGCIIYQLVAGL 229

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 53.9 bits (128), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 26/149 (17%)
Query: 7   NKLTGPLLVELIGK-QKNNALELG--FRGNPELVDQQGK----EEVCC--------PGLE 51
           ++L  P  V+L    Q +  L  G  +  N EL+    K    +E C           LE
Sbjct: 87  SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 146
Query: 52  YLH-QGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLN 110
           YLH +G    II RD+K  NILLNE +  ++ DFG +++   E     +    GTA +++
Sbjct: 147 YLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 111 TE-LTEK-----SDVDSFEIVILEIITGI 133
            E LTEK     SD+ +   +I +++ G+
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAGL 231

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 53.9 bits (128), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 26/149 (17%)
Query: 7   NKLTGPLLVELIGK-QKNNALELG--FRGNPELVDQQGK----EEVCC--------PGLE 51
           ++L  P  V+L    Q +  L  G  +  N EL+    K    +E C           LE
Sbjct: 87  SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 146
Query: 52  YLH-QGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLN 110
           YLH +G    II RD+K  NILLNE +  ++ DFG +++   E     +    GTA +++
Sbjct: 147 YLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 111 TE-LTEK-----SDVDSFEIVILEIITGI 133
            E LTEK     SD+ +   +I +++ G+
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAGL 231

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 53.9 bits (128), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 26/149 (17%)
Query: 7   NKLTGPLLVEL-IGKQKNNALELG--FRGNPELVDQQGK----EEVCC--------PGLE 51
           ++L  P  V+L    Q +  L  G  +  N EL+    K    +E C           LE
Sbjct: 92  SRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 151
Query: 52  YLH-QGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLN 110
           YLH +G    II RD+K  NILLNE +  ++ DFG +++   E     +    GTA +++
Sbjct: 152 YLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 207
Query: 111 TE-LTEK-----SDVDSFEIVILEIITGI 133
            E LTEK     SD+ +   +I +++ G+
Sbjct: 208 PELLTEKSACKSSDLWALGCIIYQLVAGL 236

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 53.9 bits (128), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 26/149 (17%)
Query: 7   NKLTGPLLVELIGK-QKNNALELG--FRGNPELVDQQGK----EEVCC--------PGLE 51
           ++L  P  V+L    Q +  L  G  +  N EL+    K    +E C           LE
Sbjct: 87  SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 146
Query: 52  YLH-QGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLN 110
           YLH +G    II RD+K  NILLNE +  ++ DFG +++   E     +    GTA +++
Sbjct: 147 YLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 111 TE-LTEK-----SDVDSFEIVILEIITGI 133
            E LTEK     SD+ +   +I +++ G+
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAGL 231

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 53.9 bits (128), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 26/149 (17%)
Query: 7   NKLTGPLLVELIGK-QKNNALELG--FRGNPELVDQQGK----EEVCC--------PGLE 51
           ++L  P  V+L    Q +  L  G  +  N EL+    K    +E C           LE
Sbjct: 88  SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 147
Query: 52  YLH-QGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLN 110
           YLH +G    II RD+K  NILLNE +  ++ DFG +++   E     +    GTA +++
Sbjct: 148 YLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 203
Query: 111 TE-LTEK-----SDVDSFEIVILEIITGI 133
            E LTEK     SD+ +   +I +++ G+
Sbjct: 204 PELLTEKSACKSSDLWALGCIIYQLVAGL 232

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 26/149 (17%)
Query: 7   NKLTGPLLVELIGK-QKNNALELG--FRGNPELVDQQGK----EEVCC--------PGLE 51
           ++L  P  V+L    Q +  L  G  +  N EL+    K    +E C           LE
Sbjct: 90  SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 149
Query: 52  YLH-QGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLN 110
           YLH +G    II RD+K  NILLNE +  ++ DFG +++   E     +    GTA +++
Sbjct: 150 YLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 205
Query: 111 TE-LTEK-----SDVDSFEIVILEIITGI 133
            E LTEK     SD+ +   +I +++ G+
Sbjct: 206 PELLTEKSACKSSDLWALGCIIYQLVAGL 234

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 26/149 (17%)
Query: 7   NKLTGPLLVELIGK-QKNNALELG--FRGNPELVDQQGK----EEVCC--------PGLE 51
           ++L  P  V+L    Q +  L  G  +  N EL+    K    +E C           LE
Sbjct: 87  SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 146
Query: 52  YLH-QGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLN 110
           YLH +G    II RD+K  NILLNE +  ++ DFG +++   E     +    GTA +++
Sbjct: 147 YLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 111 TE-LTEK-----SDVDSFEIVILEIITGI 133
            E LTEK     SD+ +   +I +++ G+
Sbjct: 203 PELLTEKSAXKSSDLWALGCIIYQLVAGL 231

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 26/149 (17%)
Query: 7   NKLTGPLLVELIGK-QKNNALELG--FRGNPELVDQQGK----EEVCC--------PGLE 51
           ++L  P  V+L    Q +  L  G  +  N EL+    K    +E C           LE
Sbjct: 87  SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 146
Query: 52  YLH-QGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLN 110
           YLH +G    II RD+K  NILLNE +  ++ DFG +++   E     +    GTA +++
Sbjct: 147 YLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 111 TE-LTEK-----SDVDSFEIVILEIITGI 133
            E LTEK     SD+ +   +I +++ G+
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAGL 231

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 53.5 bits (127), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 12/95 (12%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G++YLH      II RD+KS NI L+E    K+ DFG +       G+H    ++G+  +
Sbjct: 132 GMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 188
Query: 109 LNTELTE---------KSDVDSFEIVILEIITGIL 134
           +  E+           +SDV +F IV+ E++TG L
Sbjct: 189 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQL 223

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 53.5 bits (127), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 12/95 (12%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G++YLH      II RD+KS NI L+E    K+ DFG +       G+H    ++G+  +
Sbjct: 132 GMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 188
Query: 109 LNTELTE---------KSDVDSFEIVILEIITGIL 134
           +  E+           +SDV +F IV+ E++TG L
Sbjct: 189 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQL 223

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 53.5 bits (127), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 12/95 (12%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G++YLH      II RDMKS NI L+E +  K+ DFG + +     G+       G+  +
Sbjct: 144 GMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLW 200
Query: 109 L---------NTELTEKSDVDSFEIVILEIITGIL 134
           +         N   + +SDV S+ IV+ E++TG L
Sbjct: 201 MAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGEL 235

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 22/108 (20%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQ--------AKLADFGQSRISPVEGGTHMST 100
           G+ YLH     PII RD+KS+NIL+ +KV+         K+ DFG +R    E       
Sbjct: 117 GMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR----EWHRTTKM 172
Query: 101 TIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKG 142
           + AG   ++  E       ++ SDV S+ +++ E++TG    ++ F+G
Sbjct: 173 SAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTG----EVPFRG 216

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 58/122 (47%), Gaps = 27/122 (22%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILL-----NEKVQAKLADFGQSRISPVEGGTHMSTTIA 103
           G+EY+ Q    PI+ RD++S NI L     N  V AK+ADFG S+ S      H  + + 
Sbjct: 134 GIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQS-----VHSVSGLL 187
Query: 104 GTAGFLNTE--------LTEKSDVDSFEIVILEIITGILTVDLSFKGEFDIISVEKAVEI 155
           G   ++  E         TEK+D  SF +++  I+TG        +G FD  S  K   I
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG--------EGPFDEYSYGKIKFI 239
Query: 156 AM 157
            M
Sbjct: 240 NM 241

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 58/122 (47%), Gaps = 27/122 (22%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILL-----NEKVQAKLADFGQSRISPVEGGTHMSTTIA 103
           G+EY+ Q    PI+ RD++S NI L     N  V AK+ADFG S+ S      H  + + 
Sbjct: 134 GIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS-----VHSVSGLL 187
Query: 104 GTAGFLNTE--------LTEKSDVDSFEIVILEIITGILTVDLSFKGEFDIISVEKAVEI 155
           G   ++  E         TEK+D  SF +++  I+TG        +G FD  S  K   I
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG--------EGPFDEYSYGKIKFI 239
Query: 156 AM 157
            M
Sbjct: 240 NM 241

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 13/94 (13%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGG---THMSTTIAGT 105
           GLEYLH   K+  I RD+K+ NILL E    ++ADFG S      G      +  T  GT
Sbjct: 128 GLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 184
Query: 106 AGFLNTELTE-------KSDVDSFEIVILEIITG 132
             ++  E+ E       K+D+ SF I  +E+ TG
Sbjct: 185 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 218

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 50.1 bits (118), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 13/94 (13%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGG---THMSTTIAGT 105
           GLEYLH   K+  I RD+K+ NILL E    ++ADFG S      G      +  T  GT
Sbjct: 133 GLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 189
Query: 106 AGFLNTELTE-------KSDVDSFEIVILEIITG 132
             ++  E+ E       K+D+ SF I  +E+ TG
Sbjct: 190 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 223

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 57/122 (46%), Gaps = 27/122 (22%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILL-----NEKVQAKLADFGQSRISPVEGGTHMSTTIA 103
           G+EY+ Q    PI+ RD++S NI L     N  V AK+ADF  S+ S      H  + + 
Sbjct: 134 GIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQS-----VHSVSGLL 187
Query: 104 GTAGFLNTE--------LTEKSDVDSFEIVILEIITGILTVDLSFKGEFDIISVEKAVEI 155
           G   ++  E         TEK+D  SF +++  I+TG        +G FD  S  K   I
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG--------EGPFDEYSYGKIKFI 239
Query: 156 AM 157
            M
Sbjct: 240 NM 241

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 26/152 (17%)
Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILL-NEKVQAKLADFGQSRISPVEGGTHMSTTIAG 104
           C  G+ YLH      +I RD+K  N+LL       K+ DFG +     +  THM T   G
Sbjct: 112 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHM-TNNKG 166
Query: 105 TAGFLNTEL------TEKSDVDSFEIVILEIITGILTVDLSFKGEFDII----------- 147
           +A ++  E+      +EK DV S+ I++ E+IT     D      F I+           
Sbjct: 167 SAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPL 226
Query: 148 --SVEKAVEIAMASVSSK-VNRRPLMNQVVMV 176
             ++ K +E  M    SK  ++RP M ++V +
Sbjct: 227 IKNLPKPIESLMTRCWSKDPSQRPSMEEIVKI 258

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 26/152 (17%)
Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILL-NEKVQAKLADFGQSRISPVEGGTHMSTTIAG 104
           C  G+ YLH      +I RD+K  N+LL       K+ DFG +     +  THM T   G
Sbjct: 111 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHM-TNNKG 165
Query: 105 TAGFLNTEL------TEKSDVDSFEIVILEIITGILTVDLSFKGEFDII----------- 147
           +A ++  E+      +EK DV S+ I++ E+IT     D      F I+           
Sbjct: 166 SAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPL 225
Query: 148 --SVEKAVEIAMASVSSK-VNRRPLMNQVVMV 176
             ++ K +E  M    SK  ++RP M ++V +
Sbjct: 226 IKNLPKPIESLMTRCWSKDPSQRPSMEEIVKI 257

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMST-TIAG 104
            C  L + HQ   + II RD+K  NIL++     K+ DFG +R     G +   T  + G
Sbjct: 125 ACQALNFSHQ---NGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIG 181
Query: 105 TAGFLNTE------LTEKSDVDSFEIVILEIITG 132
           TA +L+ E      +  +SDV S   V+ E++TG
Sbjct: 182 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 15/105 (14%)
Query: 34  PELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVE 93
           P  V +    EVC   LEYLH      II RD+K  NILL++    K+ DFG ++  P  
Sbjct: 104 PNPVAKFYAAEVCL-ALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVP-- 157
Query: 94  GGTHMSTTIAGTAGFLNTELTEKS------DVDSFEIVILEIITG 132
               ++  + GT  ++  E+          D  SF I+I E++ G
Sbjct: 158 ---DVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 14/105 (13%)
Query: 43  EEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTI 102
           +++ C  +EY H   +H I+ RD+K  N+LL++ +  K+ADFG S I  +  G  + T+ 
Sbjct: 115 QQIIC-AIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNI--MTDGNFLKTS- 167
Query: 103 AGTAGF-----LNTELTEKSDVDSFE--IVILEIITGILTVDLSF 140
            G+  +     +N +L    +VD +   IV+  ++ G L  D  F
Sbjct: 168 CGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEF 212

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 12/95 (12%)
Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA-- 103
            C  L + HQ   + II RD+K  NI+++     K+ DFG +R +  + G  ++ T A  
Sbjct: 125 ACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIAR-AIADSGNSVTQTAAVI 180
Query: 104 GTAGFLNTE------LTEKSDVDSFEIVILEIITG 132
           GTA +L+ E      +  +SDV S   V+ E++TG
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 12/95 (12%)
Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA-- 103
            C  L + HQ   + II RD+K  NI+++     K+ DFG +R +  + G  ++ T A  
Sbjct: 142 ACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIAR-AIADSGNSVTQTAAVI 197
Query: 104 GTAGFLNTE------LTEKSDVDSFEIVILEIITG 132
           GTA +L+ E      +  +SDV S   V+ E++TG
Sbjct: 198 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 232

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 12/95 (12%)
Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA-- 103
            C  L + HQ   + II RD+K  NI+++     K+ DFG +R +  + G  ++ T A  
Sbjct: 125 ACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIAR-AIADSGNSVTQTAAVI 180
Query: 104 GTAGFLNTE------LTEKSDVDSFEIVILEIITG 132
           GTA +L+ E      +  +SDV S   V+ E++TG
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 12/95 (12%)
Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA-- 103
            C  L + HQ   + II RD+K  NI+++     K+ DFG +R +  + G  ++ T A  
Sbjct: 125 ACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIAR-AIADSGNSVTQTAAVI 180
Query: 104 GTAGFLNTE------LTEKSDVDSFEIVILEIITG 132
           GTA +L+ E      +  +SDV S   V+ E++TG
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 12/95 (12%)
Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA-- 103
            C  L + HQ   + II RD+K  NI+++     K+ DFG +R +  + G  ++ T A  
Sbjct: 125 ACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIAR-AIADSGNSVTQTAAVI 180
Query: 104 GTAGFLNTE------LTEKSDVDSFEIVILEIITG 132
           GTA +L+ E      +  +SDV S   V+ E++TG
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G +YLH+     +I RD+K  N+ LNE ++ K+ DFG +  + VE       T+ GT  +
Sbjct: 129 GCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLA--TKVEYDGERKKTLCGTPNY 183
Query: 109 LNTELTEKSDVDSFEIVILEI 129
           +  E+  K    SFE+ +  I
Sbjct: 184 IAPEVLSKKG-HSFEVDVWSI 203

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 59  HPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------ 112
           H ++ RD+K  N+ L+ K   KL DFG +RI  +   T  + T  GT  +++ E      
Sbjct: 135 HTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDTSFAKTFVGTPYYMSPEQMNRMS 192
Query: 113 LTEKSDVDSFEIVILEI 129
             EKSD+ S   ++ E+
Sbjct: 193 YNEKSDIWSLGCLLYEL 209

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G +YLH+     +I RD+K  N+ LNE ++ K+ DFG +  + VE       T+ GT  +
Sbjct: 133 GCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLA--TKVEYDGERKKTLCGTPNY 187
Query: 109 LNTELTEKSDVDSFEIVILEI 129
           +  E+  K    SFE+ +  I
Sbjct: 188 IAPEVLSKKG-HSFEVDVWSI 207

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G +YLH+     +I RD+K  N+ LNE ++ K+ DFG +  + VE       T+ GT  +
Sbjct: 129 GCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLA--TKVEYDGERKKTLCGTPNY 183
Query: 109 LNTELTEKSDVDSFEIVILEI 129
           +  E+  K    SFE+ +  I
Sbjct: 184 IAPEVLSKKG-HSFEVDVWSI 203

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 32/55 (58%), Gaps = 5/55 (9%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI--SPVEGGTHMSTT 101
           GLEYLHQ   H I+ RD+K  N+LL+E    KLADFG ++   SP     H   T
Sbjct: 124 GLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVT 175

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 10/92 (10%)
Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
           C G+EYL  G +   + RD+ + NIL+  +   K+ADFG +++ P++   ++      + 
Sbjct: 137 CKGMEYL--GSRR-CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP 193
Query: 107 GFLNTE-------LTEKSDVDSFEIVILEIIT 131
            F            + +SDV SF +V+ E+ T
Sbjct: 194 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 10/92 (10%)
Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
           C G+EYL  G +   + RD+ + NIL+  +   K+ADFG +++ P++   ++      + 
Sbjct: 125 CKGMEYL--GSRR-CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP 181
Query: 107 GFLNTE-------LTEKSDVDSFEIVILEIIT 131
            F            + +SDV SF +V+ E+ T
Sbjct: 182 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 10/92 (10%)
Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
           C G+EYL  G +   + RD+ + NIL+  +   K+ADFG +++ P++   ++      + 
Sbjct: 124 CKGMEYL--GSRR-CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP 180
Query: 107 GFLNTE-------LTEKSDVDSFEIVILEIIT 131
            F            + +SDV SF +V+ E+ T
Sbjct: 181 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR------ISPVEGGTHMSTTI 102
           G+EYL    +   + RD+ + N +L+E    K+ADFG +R         V+   H    +
Sbjct: 136 GMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPV 192
Query: 103 AGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
             TA         T KSDV SF +++ E++T
Sbjct: 193 KWTALESLQTYRFTTKSDVWSFGVLLWELLT 223

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR---ISPVEGGTHMSTTIAGT 105
           GL+Y+H      +I RD+K +N+L+NE  + K+ DFG +R    SP E    M+  +A T
Sbjct: 171 GLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA-T 226
Query: 106 AGFLNTEL 113
             +   EL
Sbjct: 227 RWYRAPEL 234

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 12/90 (13%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL YL +  KH I+ RD+K +NIL+N + + KL DFG S     +    M+ +  GT  +
Sbjct: 116 GLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSG----QLIDSMANSFVGTRSY 169
Query: 109 LN------TELTEKSDVDSFEIVILEIITG 132
           ++      T  + +SD+ S  + ++E+  G
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 12/90 (13%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL YL +  KH I+ RD+K +NIL+N + + KL DFG S     +    M+ +  GT  +
Sbjct: 116 GLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSG----QLIDSMANSFVGTRSY 169
Query: 109 LN------TELTEKSDVDSFEIVILEIITG 132
           ++      T  + +SD+ S  + ++E+  G
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 12/90 (13%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL YL +  KH I+ RD+K +NIL+N + + KL DFG S     +    M+ +  GT  +
Sbjct: 116 GLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSG----QLIDSMANSFVGTRSY 169
Query: 109 LN------TELTEKSDVDSFEIVILEIITG 132
           ++      T  + +SD+ S  + ++E+  G
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 16/92 (17%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGG--THMSTTIAGTA 106
           GL YL +  KH I+ RD+K +NIL+N + + KL DFG      V G     M+ +  GT 
Sbjct: 178 GLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFG------VSGQLIDSMANSFVGTR 229
Query: 107 GFLN------TELTEKSDVDSFEIVILEIITG 132
            +++      T  + +SD+ S  + ++E+  G
Sbjct: 230 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 261

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 12/82 (14%)
Query: 61  IIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTH--MSTTIAGTAGFLNTEL----- 113
           II RD+K  NILL+E+   KL DFG S+    E   H   + +  GT  ++  E+     
Sbjct: 147 IIYRDLKPENILLDEEGHIKLTDFGLSK----ESIDHEKKAYSFCGTVEYMAPEVVNRRG 202
Query: 114 -TEKSDVDSFEIVILEIITGIL 134
            T+ +D  SF +++ E++TG L
Sbjct: 203 HTQSADWWSFGVLMFEMLTGTL 224

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 12/90 (13%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL YL +  KH I+ RD+K +NIL+N + + KL DFG S     +    M+ +  GT  +
Sbjct: 116 GLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSG----QLIDSMANSFVGTRSY 169
Query: 109 LN------TELTEKSDVDSFEIVILEIITG 132
           ++      T  + +SD+ S  + ++E+  G
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 12/82 (14%)
Query: 61  IIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTH--MSTTIAGTAGFLNTEL----- 113
           II RD+K  NILL+E+   KL DFG S+    E   H   + +  GT  ++  E+     
Sbjct: 147 IIYRDLKPENILLDEEGHIKLTDFGLSK----ESIDHEKKAYSFCGTVEYMAPEVVNRRG 202
Query: 114 -TEKSDVDSFEIVILEIITGIL 134
            T+ +D  SF +++ E++TG L
Sbjct: 203 HTQSADWWSFGVLMFEMLTGTL 224

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 12/82 (14%)
Query: 61  IIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTH--MSTTIAGTAGFLNTEL----- 113
           II RD+K  NILL+E+   KL DFG S+    E   H   + +  GT  ++  E+     
Sbjct: 148 IIYRDLKPENILLDEEGHIKLTDFGLSK----ESIDHEKKAYSFCGTVEYMAPEVVNRRG 203
Query: 114 -TEKSDVDSFEIVILEIITGIL 134
            T+ +D  SF +++ E++TG L
Sbjct: 204 HTQSADWWSFGVLMFEMLTGTL 225

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 16/92 (17%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGG--THMSTTIAGTA 106
           GL YL +  KH I+ RD+K +NIL+N + + KL DFG      V G     M+ +  GT 
Sbjct: 135 GLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFG------VSGQLIDSMANSFVGTR 186
Query: 107 GFLN------TELTEKSDVDSFEIVILEIITG 132
            +++      T  + +SD+ S  + ++E+  G
Sbjct: 187 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 218

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 12/90 (13%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL YL +  KH I+ RD+K +NIL+N + + KL DFG S     +    M+ +  GT  +
Sbjct: 116 GLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSG----QLIDSMANSFVGTRSY 169
Query: 109 LN------TELTEKSDVDSFEIVILEIITG 132
           ++      T  + +SD+ S  + ++E+  G
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR---ISPVEGGTHMSTTIAGT 105
           GL+Y+H      +I RD+K +N+L+NE  + K+ DFG +R    SP E    M+  +A T
Sbjct: 170 GLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA-T 225
Query: 106 AGFLNTEL 113
             +   EL
Sbjct: 226 RWYRAPEL 233

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 16/92 (17%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGG--THMSTTIAGTA 106
           GL YL +  KH I+ RD+K +NIL+N + + KL DFG      V G     M+ +  GT 
Sbjct: 143 GLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFG------VSGQLIDSMANSFVGTR 194
Query: 107 GFLN------TELTEKSDVDSFEIVILEIITG 132
            +++      T  + +SD+ S  + ++E+  G
Sbjct: 195 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 226

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 16/106 (15%)
Query: 44  EVC---CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR-------ISPVE 93
           E+C   C G+ +L     H  I RD+ + N L++  +  K++DFG +R       +S V 
Sbjct: 108 EMCYDVCEGMAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSV- 163
Query: 94  GGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILEIIT-GILTVDL 138
            GT      +    F   + + KSDV +F I++ E+ + G +  DL
Sbjct: 164 -GTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDL 208

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 17/111 (15%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            L YL +  KH +I RD+K +NILL+E+ Q KL DFG   IS            AG A +
Sbjct: 136 ALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFG---ISGRLVDDKAKDRSAGCAAY 190
Query: 109 LNTELTE-----------KSDVDSFEIVILEIITGILTVDLSFKGEFDIIS 148
           +  E  +           ++DV S  I ++E+ TG      + K +F++++
Sbjct: 191 MAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYK-NCKTDFEVLT 240

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI-----SPVEGGTHMSTT 101
           C G+ YL +     +I RD+ + N L+ E    K++DFG +R           GT     
Sbjct: 111 CEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK 167
Query: 102 IAGTAGFLNTELTEKSDVDSFEIVILEIIT 131
            A    F  +  + KSDV SF +++ E+ +
Sbjct: 168 WASPEVFSFSRYSSKSDVWSFGVLMWEVFS 197

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI-----SPVEGGTHMSTT 101
           C G+ YL +     +I RD+ + N L+ E    K++DFG +R           GT     
Sbjct: 114 CEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK 170
Query: 102 IAGTAGFLNTELTEKSDVDSFEIVILEIIT 131
            A    F  +  + KSDV SF +++ E+ +
Sbjct: 171 WASPEVFSFSRYSSKSDVWSFGVLMWEVFS 200

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI-----SPVEGGTHMSTT 101
           C G+ YL +     +I RD+ + N L+ E    K++DFG +R           GT     
Sbjct: 116 CEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK 172
Query: 102 IAGTAGFLNTELTEKSDVDSFEIVILEIIT 131
            A    F  +  + KSDV SF +++ E+ +
Sbjct: 173 WASPEVFSFSRYSSKSDVWSFGVLMWEVFS 202

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 16/107 (14%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEK---VQAKLADFGQSRISPVEGGTHMSTTIAGT 105
           G+ Y+H   KH I+ RD+K  NILL  K      K+ DFG S  +  +  T M   I GT
Sbjct: 133 GITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS--TCFQQNTKMKDRI-GT 186
Query: 106 AGFLNTEL-----TEKSDVDSFEIVILEIITGILTVDLSFKGEFDII 147
           A ++  E+      EK DV S  +++  +++G  T     K E+DI+
Sbjct: 187 AYYIAPEVLRGTYDEKCDVWSAGVILYILLSG--TPPFYGKNEYDIL 231

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI-----SPVEGGTHMSTT 101
           C G+ YL +     +I RD+ + N L+ E    K++DFG +R           GT     
Sbjct: 113 CEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK 169
Query: 102 IAGTAGFLNTELTEKSDVDSFEIVILEIIT 131
            A    F  +  + KSDV SF +++ E+ +
Sbjct: 170 WASPEVFSFSRYSSKSDVWSFGVLMWEVFS 199

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRIS--PVEGGTHMSTTIAGTA 106
           G+ + HQ   H I+ RD+K  N+L+N     KLADFG +R    PV   TH   T+   A
Sbjct: 131 GVAHCHQ---HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRA 187
Query: 107 GFL---NTELTEKSDVDSFEIVILEIITG 132
             +   + + +   D+ S   +  E+ITG
Sbjct: 188 PDVLMGSKKYSTSVDIWSIGCIFAEMITG 216

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 16/107 (14%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEK---VQAKLADFGQSRISPVEGGTHMSTTIAGT 105
           G+ Y+H   KH I+ RD+K  NILL  K      K+ DFG S  +  +  T M   I GT
Sbjct: 133 GITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS--TCFQQNTKMKDRI-GT 186
Query: 106 AGFLNTEL-----TEKSDVDSFEIVILEIITGILTVDLSFKGEFDII 147
           A ++  E+      EK DV S  +++  +++G  T     K E+DI+
Sbjct: 187 AYYIAPEVLRGTYDEKCDVWSAGVILYILLSG--TPPFYGKNEYDIL 231

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRIS--PVEGGTHMSTTIAGTA 106
           G+ + HQ   H I+ RD+K  N+L+N     KLADFG +R    PV   TH   T+   A
Sbjct: 131 GVAHCHQ---HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRA 187
Query: 107 GFL---NTELTEKSDVDSFEIVILEIITG 132
             +   + + +   D+ S   +  E+ITG
Sbjct: 188 PDVLMGSKKYSTSVDIWSIGCIFAEMITG 216

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 13/94 (13%)
Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFG-QSRISPVEGGTHMSTTIAG 104
           C   LE+LH    + +I RD+KS NILL      KL DFG  ++I+P +      +T+ G
Sbjct: 125 CLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSTMVG 178
Query: 105 TAGFLNTELT------EKSDVDSFEIVILEIITG 132
           T  ++  E+        K D+ S  I+ +E+I G
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 212

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI-----SPVEGGTHMSTT 101
           C G+ YL +     +I RD+ + N L+ E    K++DFG +R           GT     
Sbjct: 133 CEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK 189
Query: 102 IAGTAGFLNTELTEKSDVDSFEIVILEIIT 131
            A    F  +  + KSDV SF +++ E+ +
Sbjct: 190 WASPEVFSFSRYSSKSDVWSFGVLMWEVFS 219

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 16/92 (17%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGG--THMSTTIAGTA 106
           GL YL +  KH I+ RD+K +NIL+N + + KL DFG      V G     M+ +  GT 
Sbjct: 126 GLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFG------VSGQLIDSMANSFVGTR 177
Query: 107 GFL------NTELTEKSDVDSFEIVILEIITG 132
            ++       T  + +SD+ S  + ++E+  G
Sbjct: 178 SYMAPERLQGTHYSVQSDIWSMGLSLVELAVG 209

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI-----SPVEGGTHMSTT 101
           C G+ YL +     +I RD+ + N L+ E    K++DFG +R           GT     
Sbjct: 113 CEGMAYLEEA---SVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK 169
Query: 102 IAGTAGFLNTELTEKSDVDSFEIVILEIIT 131
            A    F  +  + KSDV SF +++ E+ +
Sbjct: 170 WASPEVFSFSRYSSKSDVWSFGVLMWEVFS 199

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 11/98 (11%)
Query: 34  PELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVE 93
           P+L+D   +      G+ ++ Q      I RD+++ NIL++  +  K+ADFG +R+    
Sbjct: 278 PKLIDFSAQ---IAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARV---- 327
Query: 94  GGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILEIIT 131
            G                  T KSDV SF I+++EI+T
Sbjct: 328 -GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 364

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 16/123 (13%)
Query: 14  LVELIGKQKNNALELGFRGNPELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILL 73
           L++ +   +  AL+L     P LVD   +      G+ Y+    +   I RD++S NIL+
Sbjct: 90  LLDFLKDGEGRALKL-----PNLVDMAAQ---VAAGMAYIE---RMNYIHRDLRSANILV 138
Query: 74  NEKVQAKLADFGQSRI-----SPVEGGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILE 128
              +  K+ADFG +R+          G             L    T KSDV SF I++ E
Sbjct: 139 GNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 198
Query: 129 IIT 131
           ++T
Sbjct: 199 LVT 201

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 16/95 (16%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL +LHQ   H +I RD+K  N+LL E  + KL DFG S  + ++       T  GT  +
Sbjct: 141 GLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVS--AQLDRTVGRRNTFIGTPYW 195
Query: 109 LNTELTE-----------KSDVDSFEIVILEIITG 132
           +  E+             KSD+ S  I  +E+  G
Sbjct: 196 MAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 12/90 (13%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL YL +  KH I+ RD+K +NIL+N + + KL DFG S     E    M+    GT  +
Sbjct: 119 GLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDE----MANEFVGTRSY 172
Query: 109 LN------TELTEKSDVDSFEIVILEIITG 132
           ++      T  + +SD+ S  + ++E+  G
Sbjct: 173 MSPERLQGTHYSVQSDIWSMGLSLVEMAVG 202

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 10/92 (10%)
Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
           C G+EYL  G +   + RD+ + NIL+  +   K+ADFG +++ P++    +      + 
Sbjct: 121 CKGMEYL--GSRR-CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSP 177
Query: 107 GFLNTE-------LTEKSDVDSFEIVILEIIT 131
            F            + +SDV SF +V+ E+ T
Sbjct: 178 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 59  HPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------ 112
           H ++ RD+K  N+ L+ K   KL DFG +RI  +   T  +    GT  +++ E      
Sbjct: 135 HTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDTSFAKAFVGTPYYMSPEQMNRMS 192
Query: 113 LTEKSDVDSFEIVILEI 129
             EKSD+ S   ++ E+
Sbjct: 193 YNEKSDIWSLGCLLYEL 209

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 13/104 (12%)
Query: 34  PELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI---- 89
           P+L+D   +      G+ Y+    +   I RD+++ N+L++E +  K+ADFG +R+    
Sbjct: 110 PKLIDFSAQ---IAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDN 163
Query: 90  --SPVEGGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILEIIT 131
             +  EG        A  A       T KSDV SF I++ EI+T
Sbjct: 164 EYTAREGAKFPIKWTAPEAINFGC-FTIKSDVWSFGILLYEIVT 206

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G +YLH+     +I RD+K  N+ LNE ++ K+ DFG +  + VE        + GT  +
Sbjct: 153 GCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLA--TKVEYDGERKKVLCGTPNY 207
Query: 109 LNTELTEKSDVDSFEIVILEI 129
           +  E+  K    SFE+ +  I
Sbjct: 208 IAPEVLSKKG-HSFEVDVWSI 227

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G +YLH+     +I RD+K  N+ LNE ++ K+ DFG +  + VE        + GT  +
Sbjct: 151 GCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLA--TKVEYDGERKKVLCGTPNY 205
Query: 109 LNTELTEKSDVDSFEIVILEI 129
           +  E+  K    SFE+ +  I
Sbjct: 206 IAPEVLSKKG-HSFEVDVWSI 225

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
           C  L+++H      I+ RD+KS NI L +    +L DFG +R+  +     ++    GT 
Sbjct: 135 CLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARV--LNSTVELARACIGTP 189
Query: 107 GFLNTELTE------KSDVDSFEIVILEIIT 131
            +L+ E+ E      KSD+ +   V+ E+ T
Sbjct: 190 YYLSPEICENKPYNNKSDIWALGCVLYELCT 220

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G +YLH+     +I RD+K  N+ LNE ++ K+ DFG +  + VE        + GT  +
Sbjct: 127 GCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLA--TKVEYDGERKKVLCGTPNY 181
Query: 109 LNTELTEKSDVDSFEIVILEI 129
           +  E+  K    SFE+ +  I
Sbjct: 182 IAPEVLSKKG-HSFEVDVWSI 201

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 13/90 (14%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            L Y H      +I RD+K  N+LL    + K+ADFG S    V   +   TT+ GT  +
Sbjct: 146 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDY 198
Query: 109 LNTEL------TEKSDVDSFEIVILEIITG 132
           L  E+       EK D+ S  ++  E + G
Sbjct: 199 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 228

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 44.3 bits (103), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 34  PELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI---- 89
           P+LVD   +      G+ Y+    +   + RD+++ NIL+ E +  K+ADFG +R+    
Sbjct: 111 PQLVDMSAQ---IASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN 164
Query: 90  -SPVEGGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILEIIT 131
                 G             L    T KSDV SF I++ E+ T
Sbjct: 165 EWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 207

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 13/91 (14%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            L Y H      +I RD+K  N+LL    + K+ADFG S    V   +   TT+ GT  +
Sbjct: 124 ALSYCHSKR---VIHRDIKPENLLLGSNGELKIADFGWS----VHAPSSRRTTLCGTLDY 176
Query: 109 LNTEL------TEKSDVDSFEIVILEIITGI 133
           L  E+       EK D+ S  ++  E + G+
Sbjct: 177 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGM 207

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 34  PELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI---- 89
           P+LVD   +      G+ Y+    +   + RD+++ NIL+ E +  K+ADFG +R+    
Sbjct: 111 PQLVDMSAQ---IASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN 164
Query: 90  -SPVEGGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILEIIT 131
                 G             L    T KSDV SF I++ E+ T
Sbjct: 165 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 207

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 13/90 (14%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            L Y H      +I RD+K  N+LL    + K+ADFG S    V   +   TT+ GT  +
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDY 172
Query: 109 LNTEL------TEKSDVDSFEIVILEIITG 132
           L  E+       EK D+ S  ++  E + G
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 202

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 34  PELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI---- 89
           P+LVD   +      G+ Y+    +   + RD+++ NIL+ E +  K+ADFG +R+    
Sbjct: 103 PQLVDMAAQ---IASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN 156
Query: 90  -SPVEGGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILEIIT 131
                 G             L    T KSDV SF I++ E+ T
Sbjct: 157 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 199

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 34  PELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI---- 89
           P+LVD   +      G+ Y+    +   + RD+++ NIL+ E +  K+ADFG +R+    
Sbjct: 105 PQLVDMAAQ---IASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN 158
Query: 90  -SPVEGGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILEIIT 131
                 G             L    T KSDV SF I++ E+ T
Sbjct: 159 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 201

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 16/107 (14%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEK---VQAKLADFGQSRISPVEGGTHMSTTIAGT 105
           G+ Y+H   KH I+ RD+K  NILL  K      K+ DFG S  +  +  T M   I GT
Sbjct: 133 GITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS--TCFQQNTKMKDRI-GT 186
Query: 106 AGFLNTEL-----TEKSDVDSFEIVILEIITGILTVDLSFKGEFDII 147
           A ++  E+      EK DV S  +++  +++G  T     K E+DI+
Sbjct: 187 AYYIAPEVLRGTYDEKCDVWSAGVILYILLSG--TPPFYGKNEYDIL 231

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 34  PELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI---- 89
           P+LVD   +      G+ Y+    +   + RD+++ NIL+ E +  K+ADFG +R+    
Sbjct: 114 PQLVDMAAQ---IASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN 167
Query: 90  -SPVEGGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILEIIT 131
                 G             L    T KSDV SF I++ E+ T
Sbjct: 168 EXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 13/90 (14%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            L Y H      +I RD+K  N+LL    + K+ADFG S    V   +   TT+ GT  +
Sbjct: 123 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDY 175
Query: 109 LNTEL------TEKSDVDSFEIVILEIITG 132
           L  E+       EK D+ S  ++  E + G
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 205

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 13/90 (14%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            L Y H      +I RD+K  N+LL    + K+ADFG S    V   +   TT+ GT  +
Sbjct: 125 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDY 177
Query: 109 LNTEL------TEKSDVDSFEIVILEIITG 132
           L  E+       EK D+ S  ++  E + G
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 207

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 34  PELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI---- 89
           P+LVD   +      G+ Y+    +   + RD+++ NIL+ E +  K+ADFG +R+    
Sbjct: 107 PQLVDMAAQ---IASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN 160
Query: 90  -SPVEGGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILEIIT 131
                 G             L    T KSDV SF I++ E+ T
Sbjct: 161 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 203

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 34  PELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI---- 89
           P+LVD   +      G+ Y+    +   + RD+++ NIL+ E +  K+ADFG +R+    
Sbjct: 280 PQLVDMAAQ---IASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN 333
Query: 90  -SPVEGGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILEIIT 131
                 G             L    T KSDV SF I++ E+ T
Sbjct: 334 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 376

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 34  PELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI---- 89
           P+LVD   +      G+ Y+    +   + RD+++ NIL+ E +  K+ADFG +R+    
Sbjct: 104 PQLVDMAAQ---IASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN 157
Query: 90  -SPVEGGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILEIIT 131
                 G             L    T KSDV SF I++ E+ T
Sbjct: 158 EXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 200

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 34  PELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI---- 89
           P+LVD   +      G+ Y+    +   + RD+++ NIL+ E +  K+ADFG +R+    
Sbjct: 114 PQLVDMAAQ---IASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN 167
Query: 90  -SPVEGGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILEIIT 131
                 G             L    T KSDV SF I++ E+ T
Sbjct: 168 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 34  PELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI---- 89
           P+LVD   +      G+ Y+    +   + RD+++ NIL+ E +  K+ADFG +R+    
Sbjct: 114 PQLVDMAAQ---IASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN 167
Query: 90  -SPVEGGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILEIIT 131
                 G             L    T KSDV SF I++ E+ T
Sbjct: 168 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 34  PELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI---- 89
           P+LVD   +      G+ Y+    +   + RD+++ NIL+ E +  K+ADFG +R+    
Sbjct: 114 PQLVDMAAQ---IASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN 167
Query: 90  -SPVEGGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILEIIT 131
                 G             L    T KSDV SF I++ E+ T
Sbjct: 168 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 15/94 (15%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTH--MSTTIAGTA 106
           GL++LH      II RD+K  NILL+E+   KL DFG S+    E   H   + +  GT 
Sbjct: 142 GLDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSK----EAIDHEKKAYSFCGTV 194
Query: 107 GFLNTELTEK------SDVDSFEIVILEIITGIL 134
            ++  E+  +      +D  S+ +++ E++TG L
Sbjct: 195 EYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSL 228

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 34  PELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI---- 89
           P+LVD   +      G+ Y+    +   + RD+++ NIL+ E +  K+ADFG +R+    
Sbjct: 280 PQLVDMAAQ---IASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN 333
Query: 90  -SPVEGGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILEIIT 131
                 G             L    T KSDV SF I++ E+ T
Sbjct: 334 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 376

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 13/90 (14%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            L Y H      +I RD+K  N+LL    + K+ADFG S    V   +   TT+ GT  +
Sbjct: 125 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDY 177
Query: 109 LNTEL------TEKSDVDSFEIVILEIITG 132
           L  E+       EK D+ S  ++  E + G
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 207

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 34  PELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI---- 89
           P+LVD   +      G+ Y+    +   + RD+++ NIL+ E +  K+ADFG +R+    
Sbjct: 280 PQLVDMAAQ---IASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN 333
Query: 90  -SPVEGGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILEIIT 131
                 G             L    T KSDV SF I++ E+ T
Sbjct: 334 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 376

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 13/90 (14%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            L Y H      +I RD+K  N+LL    + K+ADFG S    V   +   TT+ GT  +
Sbjct: 119 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDY 171
Query: 109 LNTEL------TEKSDVDSFEIVILEIITG 132
           L  E+       EK D+ S  ++  E + G
Sbjct: 172 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 201

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 34  PELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI---- 89
           P+LVD   +      G+ Y+    +   + RD+++ NIL+ E +  K+ADFG +R+    
Sbjct: 114 PQLVDMAAQ---IASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN 167
Query: 90  -SPVEGGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILEIIT 131
                 G             L    T KSDV SF I++ E+ T
Sbjct: 168 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 34  PELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI---- 89
           P+LVD   +      G+ Y+    +   + RD+++ NIL+ E +  K+ADFG +R+    
Sbjct: 114 PQLVDMAAQ---IASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN 167
Query: 90  -SPVEGGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILEIIT 131
                 G             L    T KSDV SF I++ E+ T
Sbjct: 168 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 13/90 (14%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            L Y H      +I RD+K  N+LL    + K+ADFG S    V   +   TT+ GT  +
Sbjct: 137 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDY 189
Query: 109 LNTEL------TEKSDVDSFEIVILEIITG 132
           L  E+       EK D+ S  ++  E + G
Sbjct: 190 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 219

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 13/90 (14%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            L Y H      +I RD+K  N+LL    + K+ADFG S  +P    +   TT++GT  +
Sbjct: 121 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSCHAP----SSRRTTLSGTLDY 173
Query: 109 LNTEL------TEKSDVDSFEIVILEIITG 132
           L  E+       EK D+ S  ++  E + G
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 203

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 34  PELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI---- 89
           P+LVD   +      G+ Y+    +   + RD+++ NIL+ E +  K+ADFG +R+    
Sbjct: 114 PQLVDMAAQ---IASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN 167
Query: 90  -SPVEGGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILEIIT 131
                 G             L    T KSDV SF I++ E+ T
Sbjct: 168 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 13/90 (14%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            L Y H      +I RD+K  N+LL    + K+ADFG S    V   +   TT+ GT  +
Sbjct: 124 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDY 176
Query: 109 LNTEL------TEKSDVDSFEIVILEIITG 132
           L  E+       EK D+ S  ++  E + G
Sbjct: 177 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 13/90 (14%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            L Y H      +I RD+K  N+LL    + K+ADFG S    V   +   TT+ GT  +
Sbjct: 123 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDY 175
Query: 109 LNTEL------TEKSDVDSFEIVILEIITG 132
           L  E+       EK D+ S  ++  E + G
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 205

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 13/90 (14%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            L Y H      +I RD+K  N+LL    + K+ADFG S    V   +   TT+ GT  +
Sbjct: 117 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDY 169
Query: 109 LNTELT------EKSDVDSFEIVILEIITG 132
           L  E+       EK D+ S  ++  E + G
Sbjct: 170 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 199

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+YLH   K   I RD+K+ N+LL+E+   KLADFG +    +        T  GT  +
Sbjct: 132 GLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTFVGTPFW 186
Query: 109 LNTELTEKSDVDS 121
           +  E+ ++S  DS
Sbjct: 187 MAPEVIQQSAYDS 199

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 34  PELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI---- 89
           P+L+D   +      G+ ++ Q      I RD+++ NIL++  +  K+ADFG +R+    
Sbjct: 111 PKLIDFSAQ---IAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDN 164
Query: 90  --SPVEGGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILEIIT 131
             +  EG        A  A    +  T KSDV SF I+++EI+T
Sbjct: 165 EYTAREGAKFPIKWTAPEAINFGS-FTIKSDVWSFGILLMEIVT 207

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 43.5 bits (101), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 34  PELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI---- 89
           P+LVD   +      G+ Y+    +   + RD+++ NIL+ E +  K+ADFG +R+    
Sbjct: 363 PQLVDMAAQ---IASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN 416
Query: 90  -SPVEGGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILEIIT 131
                 G             L    T KSDV SF I++ E+ T
Sbjct: 417 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 459

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 62  IQRDMKSTNILLNEKVQAKLADFGQSRI------SPVEGGTHMSTTIAGTAGFLNTELTE 115
           I RD+++ NIL+++ +  K+ADFG +R+      +  EG        A  A    T  T 
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT-FTI 189
Query: 116 KSDVDSFEIVILEIIT 131
           KSDV SF I++ EI+T
Sbjct: 190 KSDVWSFGILLTEIVT 205

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 62  IQRDMKSTNILLNEKVQAKLADFGQSRI------SPVEGGTHMSTTIAGTAGFLNTELTE 115
           I RD+++ NIL+++ +  K+ADFG +R+      +  EG        A  A    T  T 
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGT-FTI 189
Query: 116 KSDVDSFEIVILEIIT 131
           KSDV SF I++ EI+T
Sbjct: 190 KSDVWSFGILLTEIVT 205

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 62  IQRDMKSTNILLNEKVQAKLADFGQSRI------SPVEGGTHMSTTIAGTAGFLNTELTE 115
           I RD+++ NIL+++ +  K+ADFG +R+      +  EG        A  A    T  T 
Sbjct: 140 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT-FTI 198
Query: 116 KSDVDSFEIVILEIIT 131
           KSDV SF I++ EI+T
Sbjct: 199 KSDVWSFGILLTEIVT 214

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+YLH   K   I RD+K+ N+LL+E  + KLADFG +    +        T  GT  +
Sbjct: 116 GLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFW 170
Query: 109 LNTELTEKSDVDS 121
           +  E+ ++S  DS
Sbjct: 171 MAPEVIKQSAYDS 183

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 62  IQRDMKSTNILLNEKVQAKLADFGQSRI------SPVEGGTHMSTTIAGTAGFLNTELTE 115
           I RD+++ NIL+++ +  K+ADFG +R+      +  EG        A  A    T  T 
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT-FTI 189
Query: 116 KSDVDSFEIVILEIIT 131
           KSDV SF I++ EI+T
Sbjct: 190 KSDVWSFGILLTEIVT 205

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 62  IQRDMKSTNILLNEKVQAKLADFGQSRI------SPVEGGTHMSTTIAGTAGFLNTELTE 115
           I RD+++ NIL+++ +  K+ADFG +R+      +  EG        A  A    T  T 
Sbjct: 141 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT-FTI 199
Query: 116 KSDVDSFEIVILEIIT 131
           KSDV SF I++ EI+T
Sbjct: 200 KSDVWSFGILLTEIVT 215

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 62  IQRDMKSTNILLNEKVQAKLADFGQSRI------SPVEGGTHMSTTIAGTAGFLNTELTE 115
           I RD+++ NIL+++ +  K+ADFG +R+      +  EG        A  A    T  T 
Sbjct: 133 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT-FTI 191
Query: 116 KSDVDSFEIVILEIIT 131
           KSDV SF I++ EI+T
Sbjct: 192 KSDVWSFGILLTEIVT 207

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 62  IQRDMKSTNILLNEKVQAKLADFGQSRI------SPVEGGTHMSTTIAGTAGFLNTELTE 115
           I RD+++ NIL+++ +  K+ADFG +R+      +  EG        A  A    T  T 
Sbjct: 132 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT-FTI 190
Query: 116 KSDVDSFEIVILEIIT 131
           KSDV SF I++ EI+T
Sbjct: 191 KSDVWSFGILLTEIVT 206

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 62  IQRDMKSTNILLNEKVQAKLADFGQSRI------SPVEGGTHMSTTIAGTAGFLNTELTE 115
           I RD+++ NIL+++ +  K+ADFG +R+      +  EG        A  A    T  T 
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT-FTI 189
Query: 116 KSDVDSFEIVILEIIT 131
           KSDV SF I++ EI+T
Sbjct: 190 KSDVWSFGILLTEIVT 205

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 62  IQRDMKSTNILLNEKVQAKLADFGQSRI------SPVEGGTHMSTTIAGTAGFLNTELTE 115
           I RD+++ NIL+++ +  K+ADFG +R+      +  EG        A  A    T  T 
Sbjct: 126 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT-FTI 184
Query: 116 KSDVDSFEIVILEIIT 131
           KSDV SF I++ EI+T
Sbjct: 185 KSDVWSFGILLTEIVT 200

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 62  IQRDMKSTNILLNEKVQAKLADFGQSRI------SPVEGGTHMSTTIAGTAGFLNTELTE 115
           I RD+++ NIL+++ +  K+ADFG +R+      +  EG        A  A    T  T 
Sbjct: 139 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT-FTI 197
Query: 116 KSDVDSFEIVILEIIT 131
           KSDV SF I++ EI+T
Sbjct: 198 KSDVWSFGILLTEIVT 213

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 62  IQRDMKSTNILLNEKVQAKLADFGQSRI------SPVEGGTHMSTTIAGTAGFLNTELTE 115
           I RD+++ NIL+++ +  K+ADFG +R+      +  EG        A  A    T  T 
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT-FTI 195
Query: 116 KSDVDSFEIVILEIIT 131
           KSDV SF I++ EI+T
Sbjct: 196 KSDVWSFGILLTEIVT 211

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 62  IQRDMKSTNILLNEKVQAKLADFGQSRI------SPVEGGTHMSTTIAGTAGFLNTELTE 115
           I RD+++ NIL+++ +  K+ADFG +R+      +  EG        A  A    T  T 
Sbjct: 136 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT-FTI 194
Query: 116 KSDVDSFEIVILEIIT 131
           KSDV SF I++ EI+T
Sbjct: 195 KSDVWSFGILLTEIVT 210

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 62  IQRDMKSTNILLNEKVQAKLADFGQSRI------SPVEGGTHMSTTIAGTAGFLNTELTE 115
           I RD+++ NIL+++ +  K+ADFG +R+      +  EG        A  A    T  T 
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGT-FTI 195
Query: 116 KSDVDSFEIVILEIIT 131
           KSDV SF I++ EI+T
Sbjct: 196 KSDVWSFGILLTEIVT 211

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 11/103 (10%)
Query: 34  PELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI---- 89
           P+LVD   +      G+ Y+    +   + RD+++ NIL+ E +  K+ADFG  R+    
Sbjct: 281 PQLVDMAAQ---IASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDN 334
Query: 90  -SPVEGGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILEIIT 131
                 G             L    T KSDV SF I++ E+ T
Sbjct: 335 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 377

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 13/94 (13%)
Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFG-QSRISPVEGGTHMSTTIAG 104
           C   LE+LH    + +I RD+KS NILL      KL DFG  ++I+P +      + + G
Sbjct: 126 CLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSXMVG 179
Query: 105 TAGFLNTELT------EKSDVDSFEIVILEIITG 132
           T  ++  E+        K D+ S  I+ +E+I G
Sbjct: 180 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 213

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 13/94 (13%)
Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFG-QSRISPVEGGTHMSTTIAG 104
           C   LE+LH    + +I RD+KS NILL      KL DFG  ++I+P +      + + G
Sbjct: 125 CLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSXMVG 178
Query: 105 TAGFLNTELT------EKSDVDSFEIVILEIITG 132
           T  ++  E+        K D+ S  I+ +E+I G
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 212

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+YLH   K   I RD+K+ N+LL+E  + KLADFG +    +        T  GT  +
Sbjct: 136 GLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFW 190
Query: 109 LNTELTEKSDVDS 121
           +  E+ ++S  DS
Sbjct: 191 MAPEVIKQSAYDS 203

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 13/94 (13%)
Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFG-QSRISPVEGGTHMSTTIAG 104
           C   LE+LH    + +I R++KS NILL      KL DFG  ++I+P +      +T+ G
Sbjct: 126 CLQALEFLH---SNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSTMVG 179
Query: 105 TAGFLNTELT------EKSDVDSFEIVILEIITG 132
           T  ++  E+        K D+ S  I+ +E+I G
Sbjct: 180 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 213

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/39 (51%), Positives = 27/39 (69%), Gaps = 3/39 (7%)
Query: 50  LEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR 88
           ++YLH G    ++ RDMK +NILLN +   K+ADFG SR
Sbjct: 122 IKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSR 157

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/41 (48%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI 89
           GL++LH    H ++ RD+K  NIL+    Q KLADFG +RI
Sbjct: 132 GLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARI 169

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 13/104 (12%)
Query: 34  PELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI---- 89
           P+L+D   +      G+ ++ Q      I RD+++ NIL++  +  K+ADFG +R+    
Sbjct: 284 PKLIDFSAQ---IAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDN 337
Query: 90  --SPVEGGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILEIIT 131
             +  EG        A  A    +  T KSDV SF I+++EI+T
Sbjct: 338 EYTAREGAKFPIKWTAPEAINFGS-FTIKSDVWSFGILLMEIVT 380

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/41 (48%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI 89
           GL++LH    H ++ RD+K  NIL+    Q KLADFG +RI
Sbjct: 132 GLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARI 169

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            +EY H   +H I+ RD+K  N+LL+E +  K+ADFG S I  +  G  + T+  G+  +
Sbjct: 115 AVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNI--MTDGNFLKTS-CGSPNY 168
Query: 109 LNTEL 113
              E+
Sbjct: 169 AAPEV 173

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/41 (48%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI 89
           GL++LH    H ++ RD+K  NIL+    Q KLADFG +RI
Sbjct: 132 GLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARI 169

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 13/120 (10%)
Query: 19  GKQKNNALELGFRGNPELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQ 78
           G  K +   +G  G PE        E+CC GLE LH   +  I+ RD+K  NILL++   
Sbjct: 269 GDLKFHIYHMGQAGFPEARAVFYAAEICC-GLEDLH---RERIVYRDLKPENILLDDHGH 324
Query: 79  AKLADFGQSRISPVEGGTHMSTTIAGTAGFL------NTELTEKSDVDSFEIVILEIITG 132
            +++D G +   P EG T       GT G++      N   T   D  +   ++ E+I G
Sbjct: 325 IRISDLGLAVHVP-EGQTIKGRV--GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAG 381

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G+EYLH      II RD+K +N+L+ E    K+ADFG S  +  +G   + +   GT  F
Sbjct: 149 GIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVS--NEFKGSDALLSNTVGTPAF 203
Query: 109 LNTE 112
           +  E
Sbjct: 204 MAPE 207

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            +EY H   +H I+ RD+K  N+LL+E +  K+ADFG S I  +  G  + T+  G+  +
Sbjct: 119 AVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNI--MTDGNFLKTS-CGSPNY 172
Query: 109 LNTEL 113
              E+
Sbjct: 173 AAPEV 177

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            +EY H   +H I+ RD+K  N+LL+E +  K+ADFG S I  +  G  + T+  G+  +
Sbjct: 125 AVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNI--MTDGNFLKTS-CGSPNY 178
Query: 109 LNTEL 113
              E+
Sbjct: 179 AAPEV 183

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 13/94 (13%)
Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFG-QSRISPVEGGTHMSTTIAG 104
           C   LE+LH    + +I RD+KS NILL      KL DFG  ++I+P +      + + G
Sbjct: 125 CLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSEMVG 178
Query: 105 TAGFLNTELT------EKSDVDSFEIVILEIITG 132
           T  ++  E+        K D+ S  I+ +E+I G
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 212

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 11/103 (10%)
Query: 34  PELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI---- 89
           P+LVD   +      G+ Y+    +   + RD+ + NIL+ E +  K+ADFG +R+    
Sbjct: 114 PQLVDMAAQ---IASGMAYVE---RMNYVHRDLAAANILVGENLVCKVADFGLARLIEDN 167
Query: 90  -SPVEGGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILEIIT 131
                 G             L    T KSDV SF I++ E+ T
Sbjct: 168 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 210

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            +EY H   +H I+ RD+K  N+LL+E +  K+ADFG S I  +  G  + T+  G+  +
Sbjct: 124 AVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNI--MTDGNFLKTS-CGSPNY 177
Query: 109 LNTEL 113
              E+
Sbjct: 178 AAPEV 182

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 13/104 (12%)
Query: 34  PELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI---- 89
           P+L+D   +      G+ Y+    +   I RD+++ N+L++E +  K+ADFG +R+    
Sbjct: 109 PKLIDFSAQ---IAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDN 162
Query: 90  --SPVEGGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILEIIT 131
             +  EG        A  A       T KS+V SF I++ EI+T
Sbjct: 163 EYTAREGAKFPIKWTAPEAINFGC-FTIKSNVWSFGILLYEIVT 205

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 13/90 (14%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            L Y H      +I RD+K  N+LL    + K+ADFG S    V   +   TT+ GT  +
Sbjct: 125 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDY 177
Query: 109 LNTEL------TEKSDVDSFEIVILEIITG 132
           L  E        EK D+ S  ++  E + G
Sbjct: 178 LPPEXIEGRXHDEKVDLWSLGVLCYEFLVG 207

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/37 (62%), Positives = 26/37 (70%), Gaps = 3/37 (8%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFG 85
           GLEYLH   K   I RD+K+ NILLN +  AKLADFG
Sbjct: 137 GLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFG 170

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 144 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEI 200
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTG 226

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 144 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEI 200
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTG 226

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 144 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEI 200
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTG 226

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 134 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 190
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 191 MLNWMHYNQTVDIWSVGCIMAELLTG 216

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 19/100 (19%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTI-----A 103
           GL+YLH   K   I RD+K+ N+LL+E+   KLADFG +       G    T I      
Sbjct: 128 GLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVA-------GQLTDTQIKRNXFV 177
Query: 104 GTAGFLNTELTEKSDVDSFEIVILEIITGILTVDLSFKGE 143
           GT  ++  E+ ++S  D F+  I  +  GI  ++L+ KGE
Sbjct: 178 GTPFWMAPEVIKQSAYD-FKADIWSL--GITAIELA-KGE 213

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 133 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 189
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTG 215

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 193
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTG 219

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 133 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 189
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTG 215

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 134 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 190
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 191 MLNWMHYNQTVDIWSVGCIMAELLTG 216

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 147 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 203
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 204 MLNWMHYNQTVDIWSVGCIMAELLTG 229

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 133 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 189
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTG 215

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 142 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 198
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTG 224

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 193
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTG 219

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 142 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 198
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTG 224

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 193
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTG 219

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 136 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 192
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 193 MLNWMHYNQTVDIWSVGCIMAELLTG 218

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 49  GLEYLHQ-GLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAG 107
           G+ YLH  G+ H    RD+K  N+LL+E+   K++DFG + +        +   + GT  
Sbjct: 116 GVVYLHGIGITH----RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITGILTVD 137
           ++  EL        E  DV S  IV+  ++ G L  D
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 160 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATRWYRAPEI 216
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 217 MLNWMHYNQTVDIWSVGCIMAELLTG 242

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 11/90 (12%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GLE+LHQ     II RD+K  N+LL++    +++D G +    ++ G   +   AGT GF
Sbjct: 301 GLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGTPGF 355
Query: 109 LNTELT--EKSD--VDSFE--IVILEIITG 132
           +  EL   E+ D  VD F   + + E+I  
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAA 385

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 193
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTG 219

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 193
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTG 219

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 193
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 194 MLNAMHYNQTVDIWSVGCIMAELLTG 219

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 157 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 213
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTG 239

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 49  GLEYLHQ-GLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAG 107
           G+ YLH  G+ H    RD+K  N+LL+E+   K++DFG + +        +   + GT  
Sbjct: 115 GVVYLHGIGITH----RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 170
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITGILTVD 137
           ++  EL        E  DV S  IV+  ++ G L  D
Sbjct: 171 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 207

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 193
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTG 219

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 11/90 (12%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GLE+LHQ     II RD+K  N+LL++    +++D G +    ++ G   +   AGT GF
Sbjct: 301 GLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGTPGF 355
Query: 109 LNTELT--EKSD--VDSFE--IVILEIITG 132
           +  EL   E+ D  VD F   + + E+I  
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAA 385

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 11/90 (12%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GLE+LHQ     II RD+K  N+LL++    +++D G +    ++ G   +   AGT GF
Sbjct: 301 GLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGTPGF 355
Query: 109 LNTELT--EKSD--VDSFE--IVILEIITG 132
           +  EL   E+ D  VD F   + + E+I  
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAA 385

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 143 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 199
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTG 225

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 193
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTG 219

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 49  GLEYLHQ-GLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAG 107
           G+ YLH  G+ H    RD+K  N+LL+E+   K++DFG + +        +   + GT  
Sbjct: 116 GVVYLHGIGITH----RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITGILTVD 137
           ++  EL        E  DV S  IV+  ++ G L  D
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 49  GLEYLHQ-GLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAG 107
           G+ YLH  G+ H    RD+K  N+LL+E+   K++DFG + +        +   + GT  
Sbjct: 117 GVVYLHGIGITH----RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITGILTVD 137
           ++  EL        E  DV S  IV+  ++ G L  D
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 143 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 199
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTG 225

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 49  GLEYLHQ-GLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAG 107
           G+ YLH  G+ H    RD+K  N+LL+E+   K++DFG + +        +   + GT  
Sbjct: 117 GVVYLHGIGITH----RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITGILTVD 137
           ++  EL        E  DV S  IV+  ++ G L  D
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 49  GLEYLHQ-GLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAG 107
           G+ YLH  G+ H    RD+K  N+LL+E+   K++DFG + +        +   + GT  
Sbjct: 116 GVVYLHGIGITH----RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITGILTVD 137
           ++  EL        E  DV S  IV+  ++ G L  D
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 49  GLEYLHQ-GLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAG 107
           G+ YLH  G+ H    RD+K  N+LL+E+   K++DFG + +        +   + GT  
Sbjct: 117 GVVYLHGIGITH----RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITGILTVD 137
           ++  EL        E  DV S  IV+  ++ G L  D
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 148 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 204
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 205 MLNWMHYNQTVDIWSVGCIMAELLTG 230

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 157 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 213
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTG 239

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 49  GLEYLHQ-GLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAG 107
           G+ YLH  G+ H    RD+K  N+LL+E+   K++DFG + +        +   + GT  
Sbjct: 116 GVVYLHGIGITH----RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITGILTVD 137
           ++  EL        E  DV S  IV+  ++ G L  D
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 160 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 216
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 217 MLNWMHYNQTVDIWSVGCIMAELLTG 242

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 144 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 200
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTG 226

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 49  GLEYLHQ-GLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAG 107
           G+ YLH  G+ H    RD+K  N+LL+E+   K++DFG + +        +   + GT  
Sbjct: 117 GVVYLHGIGITH----RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITGILTVD 137
           ++  EL        E  DV S  IV+  ++ G L  D
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 156 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 212
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 213 MLNWMHYNQTVDIWSVGCIMAELLTG 238

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 156 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 212
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 213 MLNWMHYNQTVDIWSVGCIMAELLTG 238

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 149 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 205
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTG 231

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 139 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 195
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTG 221

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 135 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 191
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 192 MLNWMHYNQTVDIWSVGCIMAELLTG 217

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
Query: 33  NPELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR---- 88
           NP + D  G       G++YL        + RD+ + N +L+EK   K+ADFG +R    
Sbjct: 121 NPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 177
Query: 89  --ISPVEGGTHMSTTIAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
                V   T     +   A       + T KSDV SF +++ E++T
Sbjct: 178 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 224

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 139 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 195
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTG 221

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 49  GLEYLHQ-GLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAG 107
           G+ YLH  G+ H    RD+K  N+LL+E+   K++DFG + +        +   + GT  
Sbjct: 116 GVVYLHGIGITH----RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITGILTVD 137
           ++  EL        E  DV S  IV+  ++ G L  D
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 49  GLEYLHQ-GLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAG 107
           G+ YLH  G+ H    RD+K  N+LL+E+   K++DFG + +        +   + GT  
Sbjct: 117 GVVYLHGIGITH----RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITGILTVD 137
           ++  EL        E  DV S  IV+  ++ G L  D
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 149 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 205
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTG 231

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 11/90 (12%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GLE+LHQ     II RD+K  N+LL++    +++D G +    ++ G   +   AGT GF
Sbjct: 301 GLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGTPGF 355
Query: 109 LNTELT--EKSD--VDSFE--IVILEIITG 132
           +  EL   E+ D  VD F   + + E+I  
Sbjct: 356 MAPELLLGEEYDFSVDYFALGVTLYEMIAA 385

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 143 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 199
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTG 225

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 149 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 205
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELLTG 231

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 49  GLEYLHQ-GLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAG 107
           G+ YLH  G+ H    RD+K  N+LL+E+   K++DFG + +        +   + GT  
Sbjct: 117 GVVYLHGIGITH----RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITGILTVD 137
           ++  EL        E  DV S  IV+  ++ G L  D
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 139 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 195
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTG 221

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 193
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTG 219

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 49  GLEYLHQ-GLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAG 107
           G+ YLH  G+ H    RD+K  N+LL+E+   K++DFG + +        +   + GT  
Sbjct: 116 GVVYLHGIGITH----RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITGILTVD 137
           ++  EL        E  DV S  IV+  ++ G L  D
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G++YLH      +I RD+K  N+ LN+ +  K+ DFG +  + +E       T+ GT  +
Sbjct: 154 GVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLA--TKIEFDGERKKTLCGTPNY 208
Query: 109 LNTELTEKSDVDSFEIVILEI 129
           +  E+  K    SFE+ I  +
Sbjct: 209 IAPEVLCKKG-HSFEVDIWSL 228

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 193
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTG 219

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 49  GLEYLHQ-GLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAG 107
           G+ YLH  G+ H    RD+K  N+LL+E+   K++DFG + +        +   + GT  
Sbjct: 116 GVVYLHGIGITH----RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITGILTVD 137
           ++  EL        E  DV S  IV+  ++ G L  D
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
Query: 33  NPELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR---- 88
           NP + D  G       G++YL        + RD+ + N +L+EK   K+ADFG +R    
Sbjct: 127 NPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 183
Query: 89  --ISPVEGGTHMSTTIAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
                V   T     +   A       + T KSDV SF +++ E++T
Sbjct: 184 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 49  GLEYLHQ-GLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAG 107
           G+ YLH  G+ H    RD+K  N+LL+E+   K++DFG + +        +   + GT  
Sbjct: 117 GVVYLHGIGITH----RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 172
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITGILTVD 137
           ++  EL        E  DV S  IV+  ++ G L  D
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 49  GLEYLHQ-GLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAG 107
           G+ YLH  G+ H    RD+K  N+LL+E+   K++DFG + +        +   + GT  
Sbjct: 116 GVVYLHGIGITH----RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLP 171
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITGILTVD 137
           ++  EL        E  DV S  IV+  ++ G L  D
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
Query: 33  NPELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR---- 88
           NP + D  G       G++YL        + RD+ + N +L+EK   K+ADFG +R    
Sbjct: 147 NPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 203
Query: 89  --ISPVEGGTHMSTTIAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
                V   T     +   A       + T KSDV SF +++ E++T
Sbjct: 204 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 250

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
Query: 33  NPELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR---- 88
           NP + D  G       G++YL        + RD+ + N +L+EK   K+ADFG +R    
Sbjct: 124 NPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180
Query: 89  --ISPVEGGTHMSTTIAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
                V   T     +   A       + T KSDV SF +++ E++T
Sbjct: 181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 227

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
Query: 33  NPELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR---- 88
           NP + D  G       G++YL        + RD+ + N +L+EK   K+ADFG +R    
Sbjct: 148 NPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 204
Query: 89  --ISPVEGGTHMSTTIAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
                V   T     +   A       + T KSDV SF +++ E++T
Sbjct: 205 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 251

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
Query: 33  NPELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR---- 88
           NP + D  G       G++YL        + RD+ + N +L+EK   K+ADFG +R    
Sbjct: 129 NPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 185
Query: 89  --ISPVEGGTHMSTTIAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
                V   T     +   A       + T KSDV SF +++ E++T
Sbjct: 186 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
Query: 33  NPELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR---- 88
           NP + D  G       G++YL        + RD+ + N +L+EK   K+ADFG +R    
Sbjct: 128 NPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 184
Query: 89  --ISPVEGGTHMSTTIAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
                V   T     +   A       + T KSDV SF +++ E++T
Sbjct: 185 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
Query: 33  NPELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR---- 88
           NP + D  G       G++YL        + RD+ + N +L+EK   K+ADFG +R    
Sbjct: 129 NPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 185
Query: 89  --ISPVEGGTHMSTTIAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
                V   T     +   A       + T KSDV SF +++ E++T
Sbjct: 186 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
Query: 33  NPELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR---- 88
           NP + D  G       G++YL        + RD+ + N +L+EK   K+ADFG +R    
Sbjct: 126 NPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 182
Query: 89  --ISPVEGGTHMSTTIAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
                V   T     +   A       + T KSDV SF +++ E++T
Sbjct: 183 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 229

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 148 GLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEI 204
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 205 MLNWMHYNQTVDIWSVGCIMAELLTG 230

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 59/122 (48%), Gaps = 9/122 (7%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 166 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEI 222
Query: 109 LNTELTEKSDVDSFEI--VILEIITGILTVDLSFKGEFDIISVEKAVEIAMASVSSKVNR 166
           +   +     VD + +  ++ E++TG       F G   I  +++ + +     +S ++R
Sbjct: 223 MLNWMHYNMTVDIWSVGCIMAELLTGRTL----FPGTDHINQLQQIMRLTGTPPASVISR 278
Query: 167 RP 168
            P
Sbjct: 279 MP 280

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 142 GLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEI 198
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTG 224

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 13/90 (14%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            L Y H      +I RD+K  N+LL    + K+A+FG S    V   +   TT+ GT  +
Sbjct: 122 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWS----VHAPSSRRTTLCGTLDY 174
Query: 109 LNTEL------TEKSDVDSFEIVILEIITG 132
           L  E+       EK D+ S  ++  E + G
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 204

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRIS-PVEGGTHMSTTIAGTAG 107
           GL+Y+H      ++ RD+K +N+LLN     K+ DFG +R++ P    T   T    T  
Sbjct: 140 GLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITG 132
           +   E+       T+  D+ S   ++ E+++ 
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 13/91 (14%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            L Y H      +I RD+K  N+LL    + K+ADFG S    V   +    T+ GT  +
Sbjct: 124 ALSYCHSKR---VIHRDIKPENLLLGSNGELKIADFGWS----VHAPSSRRDTLCGTLDY 176
Query: 109 LNTEL------TEKSDVDSFEIVILEIITGI 133
           L  E+       EK D+ S  ++  E + G+
Sbjct: 177 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGM 207

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRIS-PVEGGTHMSTTIAGTAG 107
           GL+Y+H      ++ RD+K +N+LLN     K+ DFG +R++ P    T   T    T  
Sbjct: 136 GLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITG 132
           +   E+       T+  D+ S   ++ E+++ 
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 142 GLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEI 198
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELLTG 224

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
Query: 33  NPELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR---- 88
           NP + D  G       G++YL        + RD+ + N +L+EK   K+ADFG +R    
Sbjct: 128 NPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 184
Query: 89  --ISPVEGGTHMSTTIAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
                V   T     +   A       + T KSDV SF +++ E++T
Sbjct: 185 KEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTH 97
           GL Y H   +  ++ RD+K  N+L+NE+ + KLADFG +R   +   T+
Sbjct: 112 GLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY 157

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEI 193
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTG 219

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 18/128 (14%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            L +LHQ     II RD+K  NI+LN +   KL DFG  + S +  GT ++ T  GT  +
Sbjct: 133 ALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKES-IHDGT-VTHTFCGTIEY 187
Query: 109 LNTELTEKSD----VDSFEIVILEIITGILTVDLSFKGEFDIISVEKAVEIAMASVSSKV 164
           +  E+  +S     VD + +  L  +  +LT    F GE    +++K ++        K+
Sbjct: 188 MAPEILMRSGHNRAVDWWSLGAL--MYDMLTGAPPFTGENRKKTIDKILK-------CKL 238
Query: 165 NRRPLMNQ 172
           N  P + Q
Sbjct: 239 NLPPYLTQ 246

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E    ++T        
Sbjct: 133 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEI 189
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTG 215

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR-ISPVEGGTHMSTTIAGT 105
           C  +EYL     +  + RD+ + N+L++E   AK++DFG ++  S  +    +       
Sbjct: 127 CEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAP 183
Query: 106 AGFLNTELTEKSDVDSFEIVILEIIT 131
                 + + KSDV SF I++ EI +
Sbjct: 184 EALREKKFSTKSDVWSFGILLWEIYS 209

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 13/90 (14%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            L Y H      +I RD+K  N+LL    + K+ADFG S    V   +   T + GT  +
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTXLCGTLDY 172
Query: 109 LNTEL------TEKSDVDSFEIVILEIITG 132
           L  E+       EK D+ S  ++  E + G
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 202

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTI-----A 103
           GL+YLH   K   I RD+K+ N+LL+E  + KLADFG +       G    T I      
Sbjct: 116 GLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA-------GQLTDTQIKRNXFV 165
Query: 104 GTAGFLNTELTEKSDVDS 121
           GT  ++  E+ ++S  DS
Sbjct: 166 GTPFWMAPEVIKQSAYDS 183

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 13/90 (14%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            L Y H      +I RD+K  N+LL    + K+ADFG S    V   +   T + GT  +
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTDLCGTLDY 172
Query: 109 LNTEL------TEKSDVDSFEIVILEIITG 132
           L  E+       EK D+ S  ++  E + G
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 202

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRIS-PVEGGTHMSTTIAGTAG 107
           GL+Y+H      ++ RD+K +N+LLN     K+ DFG +R++ P    T   T    T  
Sbjct: 134 GLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITG 132
           +   E+       T+  D+ S   ++ E+++ 
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 222

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 59  HPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------ 112
           H ++ RD+K  N+ L+ K   KL DFG +RI  +      +    GT  +++ E      
Sbjct: 135 HTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDEDFAKEFVGTPYYMSPEQMNRMS 192
Query: 113 LTEKSDVDSFEIVILEI 129
             EKSD+ S   ++ E+
Sbjct: 193 YNEKSDIWSLGCLLYEL 209

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 13/90 (14%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            L Y H      +I RD+K  N+LL    + K+ADFG S    V   +   T + GT  +
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTDLCGTLDY 172
Query: 109 LNTEL------TEKSDVDSFEIVILEIITG 132
           L  E+       EK D+ S  ++  E + G
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 202

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRIS-PVEGGTHMSTTIAGTAG 107
           GL+Y+H      ++ RD+K +N+LLN     K+ DFG +R++ P    T   T    T  
Sbjct: 138 GLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITG 132
           +   E+       T+  D+ S   ++ E+++ 
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 226

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 13/90 (14%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            L Y H      +I RD+K  N+LL    + K+ADFG S    V   +    T+ GT  +
Sbjct: 121 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRDTLCGTLDY 173
Query: 109 LNTEL------TEKSDVDSFEIVILEIITG 132
           L  E+       EK D+ S  ++  E + G
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 203

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 13/90 (14%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            L Y H      +I RD+K  N+LL    + K+ADFG S    V   +   T + GT  +
Sbjct: 121 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTDLCGTLDY 173
Query: 109 LNTEL------TEKSDVDSFEIVILEIITG 132
           L  E+       EK D+ S  ++  E + G
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 203

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRIS-PVEGGTHMSTTIAGTAG 107
           GL+Y+H      ++ RD+K +N+LLN     K+ DFG +R++ P    T   T    T  
Sbjct: 156 GLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITG 132
           +   E+       T+  D+ S   ++ E+++ 
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 244

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E    ++T        
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEI 193
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTG 219

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRIS-PVEGGTHMSTTIAGTAG 107
           GL+Y+H      ++ RD+K +N+LLN     K+ DFG +R++ P    T   T    T  
Sbjct: 138 GLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITG 132
           +   E+       T+  D+ S   ++ E+++ 
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 226

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRIS-PVEGGTHMSTTIAGTAG 107
           GL+Y+H      ++ RD+K +N+LLN     K+ DFG +R++ P    T   T    T  
Sbjct: 134 GLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITG 132
           +   E+       T+  D+ S   ++ E+++ 
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 222

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 13/90 (14%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            L Y H      +I RD+K  N+LL    + K+ADFG S    V   +   T + GT  +
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTELCGTLDY 172
Query: 109 LNTEL------TEKSDVDSFEIVILEIITG 132
           L  E+       EK D+ S  ++  E + G
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 202

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR-ISPVEGGTHMSTTIAGT 105
           C  +EYL     +  + RD+ + N+L++E   AK++DFG ++  S  +    +       
Sbjct: 112 CEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAP 168
Query: 106 AGFLNTELTEKSDVDSFEIVILEIIT 131
                 + + KSDV SF I++ EI +
Sbjct: 169 EALREKKFSTKSDVWSFGILLWEIYS 194

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E    ++T        
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEI 193
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTG 219

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRIS-PVEGGTHMSTTIAGTAG 107
           GL+Y+H      ++ RD+K +N+LLN     K+ DFG +R++ P    T   T    T  
Sbjct: 140 GLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITG 132
           +   E+       T+  D+ S   ++ E+++ 
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 13/90 (14%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            L Y H      +I RD+K  N+LL    + K+A+FG S    V   +   TT+ GT  +
Sbjct: 123 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWS----VHAPSSRRTTLCGTLDY 175
Query: 109 LNTEL------TEKSDVDSFEIVILEIITG 132
           L  E+       EK D+ S  ++  E + G
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 205

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 13/90 (14%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            L Y H      +I RD+K  N+LL    + K+ADFG S    V   +   T + GT  +
Sbjct: 125 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTDLCGTLDY 177
Query: 109 LNTEL------TEKSDVDSFEIVILEIITG 132
           L  E+       EK D+ S  ++  E + G
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 207

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G++Y H   +H ++ RD+K  N+LL+  + AK+ADFG S +  +  G  +  +  G+  +
Sbjct: 128 GVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNM--MSDGEFLRXS-CGSPNY 181
Query: 109 LNTELTE-------KSDVDSFEIVILEIITGILTVD 137
              E+         + D+ S  +++  ++ G L  D
Sbjct: 182 AAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFD 217

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRIS-PVEGGTHMSTTIAGTAG 107
           GL+Y+H      ++ RD+K +N+LLN     K+ DFG +R++ P    T   T    T  
Sbjct: 141 GLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 197
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITG 132
           +   E+       T+  D+ S   ++ E+++ 
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 229

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 49  GLEYLHQ-GLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAG 107
           G+ YLH  G+ H    RD+K  N+LL+E+   K++DFG + +        +   + GT  
Sbjct: 117 GVVYLHGIGITH----RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 172
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITGILTVD 137
           ++  EL        E  DV S  IV+  ++ G L  D
Sbjct: 173 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTI-----A 103
           GL+YLH   K   I RD+K+ N+LL+E  + KLADFG +       G    T I      
Sbjct: 131 GLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA-------GQLTDTQIKRNXFV 180
Query: 104 GTAGFLNTELTEKSDVDS 121
           GT  ++  E+ ++S  DS
Sbjct: 181 GTPFWMAPEVIKQSAYDS 198

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRIS-PVEGGTHMSTTIAGTAG 107
           GL+Y+H      ++ RD+K +N+LLN     K+ DFG +R++ P    T   T    T  
Sbjct: 142 GLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 198
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITG 132
           +   E+       T+  D+ S   ++ E+++ 
Sbjct: 199 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 230

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRIS-PVEGGTHMSTTIAGTAG 107
           GL+Y+H      ++ RD+K +N+LLN     K+ DFG +R++ P    T   T    T  
Sbjct: 133 GLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 189
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITG 132
           +   E+       T+  D+ S   ++ E+++ 
Sbjct: 190 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 221

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRIS-PVEGGTHMSTTIAGTAG 107
           GL+Y+H      ++ RD+K +N+LLN     K+ DFG +R++ P    T   T    T  
Sbjct: 140 GLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITG 132
           +   E+       T+  D+ S   ++ E+++ 
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 49  GLEYLHQ-GLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAG 107
           G+ YLH  G+ H    RD+K  N+LL+E+   K++DFG + +        +   + GT  
Sbjct: 116 GVVYLHGIGITH----RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITGILTVD 137
           ++  EL        E  DV S  IV+  ++ G L  D
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 49  GLEYLHQ-GLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAG 107
           G+ YLH  G+ H    RD+K  N+LL+E+   K++DFG + +        +   + GT  
Sbjct: 116 GVVYLHGIGITH----RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITGILTVD 137
           ++  EL        E  DV S  IV+  ++ G L  D
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 49  GLEYLHQ-GLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAG 107
           G+ YLH  G+ H    RD+K  N+LL+E+   K++DFG + +        +   + GT  
Sbjct: 116 GVVYLHGIGITH----RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITGILTVD 137
           ++  EL        E  DV S  IV+  ++ G L  D
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 49  GLEYLHQ-GLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAG 107
           G+ YLH  G+ H    RD+K  N+LL+E+   K++DFG + +        +   + GT  
Sbjct: 116 GVVYLHGIGITH----RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLP 171
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITGILTVD 137
           ++  EL        E  DV S  IV+  ++ G L  D
Sbjct: 172 YVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRIS-PVEGGTHMSTTIAGTAG 107
           GL+Y+H      ++ RD+K +N+LLN     K+ DFG +R++ P    T   T    T  
Sbjct: 144 GLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 200
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITG 132
           +   E+       T+  D+ S   ++ E+++ 
Sbjct: 201 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 232

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRIS-PVEGGTHMSTTIAGTAG 107
           GL+Y+H      ++ RD+K +N+LLN     K+ DFG +R++ P    T   T    T  
Sbjct: 136 GLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITG 132
           +   E+       T+  D+ S   ++ E+++ 
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 19  GKQKNNALELGFRGNPELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQ 78
           G  K +   +G  G PE        E+CC GLE LH   +  I+ RD+K  NILL++   
Sbjct: 269 GDLKFHIYHMGQAGFPEARAVFYAAEICC-GLEDLH---RERIVYRDLKPENILLDDHGH 324
Query: 79  AKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTELTE 115
            +++D G +   P EG T       GT G++  E+ +
Sbjct: 325 IRISDLGLAVHVP-EGQTIKGRV--GTVGYMAPEVVK 358

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
           C G+EYL  G K   I RD+ + NIL+  + + K+ DFG +++ P +           + 
Sbjct: 128 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 184
Query: 107 GFLNT--ELTEK-----SDVDSFEIVILEIITGI 133
            F      LTE      SDV SF +V+ E+ T I
Sbjct: 185 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 218

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 143 GLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEI 199
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLTG 225

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
           C G+EYL  G K   I RD+ + NIL+  + + K+ DFG +++ P +           + 
Sbjct: 127 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 183
Query: 107 GFLNT--ELTEK-----SDVDSFEIVILEIITGI 133
            F      LTE      SDV SF +V+ E+ T I
Sbjct: 184 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 217

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G++YL Q      I RD+ + NIL+ E   AK+ADFG SR   V     M          
Sbjct: 154 GMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAI 210
Query: 109 --LNTEL-TEKSDVDSFEIVILEIIT 131
             LN  + T  SDV S+ +++ EI++
Sbjct: 211 ESLNYSVYTTNSDVWSYGVLLWEIVS 236

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
           C G+EYL  G K   I RD+ + NIL+  + + K+ DFG +++ P +           + 
Sbjct: 123 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 179
Query: 107 GFLNT--ELTEK-----SDVDSFEIVILEIITGI 133
            F      LTE      SDV SF +V+ E+ T I
Sbjct: 180 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 213

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR-ISPVEGGTHMSTTIAGT 105
           C  +EYL     +  + RD+ + N+L++E   AK++DFG ++  S  +    +       
Sbjct: 118 CEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAP 174
Query: 106 AGFLNTELTEKSDVDSFEIVILEIIT 131
                   + KSDV SF I++ EI +
Sbjct: 175 EALREAAFSTKSDVWSFGILLWEIYS 200

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T        
Sbjct: 139 GLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEI 195
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELLTG 221

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR------ISPVEGGTHMSTTI 102
           G+ YL  GL    + RD+ + N L+ + +  K+ DFG SR         V G T +    
Sbjct: 147 GMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRW 203
Query: 103 AGTAGFLNTELTEKSDVDSFEIVILEIIT 131
                 L  + T +SDV SF +V+ EI T
Sbjct: 204 MPPESILYRKFTTESDVWSFGVVLWEIFT 232

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G++YL Q      I RD+ + NIL+ E   AK+ADFG SR   V     M          
Sbjct: 144 GMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAI 200
Query: 109 --LNTEL-TEKSDVDSFEIVILEIIT 131
             LN  + T  SDV S+ +++ EI++
Sbjct: 201 ESLNYSVYTTNSDVWSYGVLLWEIVS 226

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR------ISPVEGGTHMSTTI 102
           G+ YL  GL    + RD+ + N L+ + +  K+ DFG SR         V G T +    
Sbjct: 141 GMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRW 197
Query: 103 AGTAGFLNTELTEKSDVDSFEIVILEIIT 131
                 L  + T +SDV SF +V+ EI T
Sbjct: 198 MPPESILYRKFTTESDVWSFGVVLWEIFT 226

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
           C G+EYL  G K   I RD+ + NIL+  + + K+ DFG +++ P +           + 
Sbjct: 130 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 186
Query: 107 GFLNT--ELTEK-----SDVDSFEIVILEIITGI 133
            F      LTE      SDV SF +V+ E+ T I
Sbjct: 187 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 220

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISP-------VEGGTHMS 99
           C G+EYL  G K   I RD+ + NIL+  + + K+ DFG +++ P       V+      
Sbjct: 124 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESP 180
Query: 100 TTIAGTAGFLNTELTEKSDVDSFEIVILEIITGI 133
                      ++ +  SDV SF +V+ E+ T I
Sbjct: 181 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 214

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
           C G+EYL  G K   I RD+ + NIL+  + + K+ DFG +++ P +           + 
Sbjct: 127 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 183
Query: 107 GFLNT--ELTEK-----SDVDSFEIVILEIITGI 133
            F      LTE      SDV SF +V+ E+ T I
Sbjct: 184 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 217

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISP-------VEGGTHMS 99
           C G+EYL  G K   I RD+ + NIL+  + + K+ DFG +++ P       V+      
Sbjct: 142 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 198
Query: 100 TTIAGTAGFLNTELTEKSDVDSFEIVILEIITGI 133
                      ++ +  SDV SF +V+ E+ T I
Sbjct: 199 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 232

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR-ISPVEGGTHMSTTIAGT 105
           C  +EYL     +  + RD+ + N+L++E   AK++DFG ++  S  +    +       
Sbjct: 299 CEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAP 355
Query: 106 AGFLNTELTEKSDVDSFEIVILEIIT 131
                 + + KSDV SF I++ EI +
Sbjct: 356 EALREKKFSTKSDVWSFGILLWEIYS 381

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISP-------VEGGTHMS 99
           C G+EYL  G K   I RD+ + NIL+  + + K+ DFG +++ P       V+      
Sbjct: 124 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 180
Query: 100 TTIAGTAGFLNTELTEKSDVDSFEIVILEIITGI 133
                      ++ +  SDV SF +V+ E+ T I
Sbjct: 181 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 214

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
           C G+EYL  G K   I RD+ + NIL+  + + K+ DFG +++ P +           + 
Sbjct: 155 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 211
Query: 107 GFLNT--ELTEK-----SDVDSFEIVILEIITGI 133
            F      LTE      SDV SF +V+ E+ T I
Sbjct: 212 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 245

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 14/92 (15%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAG---- 104
           G++YL        + RD+ + NIL+N  +  K++DFG SR+  +E     + T +G    
Sbjct: 159 GMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRV--LEDDPEATYTTSGGKIP 213
Query: 105 ---TA--GFLNTELTEKSDVDSFEIVILEIIT 131
              TA       + T  SDV SF IV+ E++T
Sbjct: 214 IRWTAPEAISYRKFTSASDVWSFGIVMWEVMT 245

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
           C G+EYL  G K   I RD+ + NIL+  + + K+ DFG +++ P +           + 
Sbjct: 122 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 178
Query: 107 GFLNT--ELTEK-----SDVDSFEIVILEIITGI 133
            F      LTE      SDV SF +V+ E+ T I
Sbjct: 179 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 212

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISP-------VEGGTHMS 99
           C G+EYL  G K   I RD+ + NIL+  + + K+ DFG +++ P       V+      
Sbjct: 131 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 187
Query: 100 TTIAGTAGFLNTELTEKSDVDSFEIVILEIITGI 133
                      ++ +  SDV SF +V+ E+ T I
Sbjct: 188 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 221

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
           C G+EYL  G K   I RD+ + NIL+  + + K+ DFG +++ P +           + 
Sbjct: 127 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 183
Query: 107 GFLNT--ELTEK-----SDVDSFEIVILEIITGI 133
            F      LTE      SDV SF +V+ E+ T I
Sbjct: 184 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 217

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
           C G+EYL  G K   I RD+ + NIL+  + + K+ DFG +++ P +           + 
Sbjct: 124 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 180
Query: 107 GFLNT--ELTEK-----SDVDSFEIVILEIITGI 133
            F      LTE      SDV SF +V+ E+ T I
Sbjct: 181 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 214

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            ++Y H   +H ++ RD+K  N+LL+  + AK+ADFG S +  +  G  + T+  G+  +
Sbjct: 123 AVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNM--MSDGEFLRTS-CGSPNY 176
Query: 109 LNTELTE-------KSDVDSFEIVILEIITGILTVD 137
              E+         + D+ S  +++  ++ G L  D
Sbjct: 177 AAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
           C G+EYL  G K   I RD+ + NIL+  + + K+ DFG +++ P +           + 
Sbjct: 129 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 185
Query: 107 GFLNT--ELTEK-----SDVDSFEIVILEIITGI 133
            F      LTE      SDV SF +V+ E+ T I
Sbjct: 186 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 219

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRIS-PVEGGTHMSTTIAGTAG 107
           GL+Y+H      ++ RD+K +N+LLN     K+ DFG +R++ P    T   T    T  
Sbjct: 156 GLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITG 132
           +   E+       T+  D+ S   ++ E+++ 
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 244

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRIS-PVEGGTHMSTTIAGTAG 107
           GL+Y+H      ++ RD+K +N+LLN     K+ DFG +R++ P    T   T    T  
Sbjct: 136 GLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITG 132
           +   E+       T+  D+ S   ++ E+++ 
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISP-------VEGGTHMS 99
           C G+EYL  G K   I RD+ + NIL+  + + K+ DFG +++ P       V+      
Sbjct: 142 CKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 198
Query: 100 TTIAGTAGFLNTELTEKSDVDSFEIVILEIITGI 133
                      ++ +  SDV SF +V+ E+ T I
Sbjct: 199 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 232

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRIS-PVEGGTHMSTTIAGTAG 107
           GL+Y+H      ++ RD+K +N+LLN     K+ DFG +R++ P    T   T    T  
Sbjct: 136 GLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITG 132
           +   E+       T+  D+ S   ++ E+++ 
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRIS-PVEGGTHMSTTIAGTAG 107
           GL+Y+H      ++ RD+K +N+LLN     K+ DFG +R++ P    T   T    T  
Sbjct: 140 GLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITG 132
           +   E+       T+  D+ S   ++ E+++ 
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 62  IQRDMKSTNILLNEKVQAKLADFGQSRI------SPVEGGTHMSTTIAGTAGFLNTELTE 115
           I R++++ NIL+++ +  K+ADFG +R+      +  EG        A  A    T  T 
Sbjct: 127 IHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT-FTI 185
Query: 116 KSDVDSFEIVILEIIT 131
           KSDV SF I++ EI+T
Sbjct: 186 KSDVWSFGILLTEIVT 201

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 37/153 (24%)
Query: 49  GLEYLH-QGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR------------ISPVEGG 95
            L Y+H QG    II RD+K  NI ++E    K+ DFG ++               + G 
Sbjct: 128 ALSYIHSQG----IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 96  THMSTTIAGTAGFLNTEL-------TEKSDVDSFEIVILEII----TG---------ILT 135
           +   T+  GTA ++ TE+        EK D+ S  I+  E+I    TG         + +
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRS 243
Query: 136 VDLSFKGEFDIISVEKAVEIAMASVSSKVNRRP 168
           V + F  +FD   ++   +I    +    N+RP
Sbjct: 244 VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRP 276

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 52  YLHQGLKHPIIQRDMKSTNILLNEKVQA---KLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           ++HQ   H I+ RD+K  N+LL  K +    KLADFG +    V+G        AGT G+
Sbjct: 145 HIHQ---HDIVHRDLKPENLLLASKCKGAAVKLADFGLA--IEVQGEQQAWFGFAGTPGY 199
Query: 109 LNTELTEK 116
           L+ E+  K
Sbjct: 200 LSPEVLRK 207

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 17/131 (12%)
Query: 14  LVELIGKQKNNALELGFR--GNPELVDQQGKEEVCCP-----GLEYLHQGLKHPIIQRDM 66
           L E +  ++   LE  F    NPE      K+ V C      G+EYL        I RD+
Sbjct: 121 LREYLQARRPPGLEFSFNPSHNPE-EQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDL 176
Query: 67  KSTNILLNEKVQAKLADFGQSR----ISPVEGGTHMSTTIAGTA--GFLNTELTEKSDVD 120
            + N+L+ E    K+ADFG +R    I   +  T+    +   A     +   T +SDV 
Sbjct: 177 AARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVW 236
Query: 121 SFEIVILEIIT 131
           SF +++ EI T
Sbjct: 237 SFGVLLWEIFT 247

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 37/153 (24%)
Query: 49  GLEYLH-QGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR------------ISPVEGG 95
            L Y+H QG    II RD+K  NI ++E    K+ DFG ++               + G 
Sbjct: 128 ALSYIHSQG----IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 96  THMSTTIAGTAGFLNTEL-------TEKSDVDSFEIVILEII----TG---------ILT 135
           +   T+  GTA ++ TE+        EK D+ S  I+  E+I    TG         + +
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRS 243
Query: 136 VDLSFKGEFDIISVEKAVEIAMASVSSKVNRRP 168
           V + F  +FD   ++   +I    +    N+RP
Sbjct: 244 VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRP 276

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRIS-PVEGGTHMSTTIAGTAG 107
           GL+Y+H      ++ RD+K +N+LLN     K+ DFG +R++ P    T   T    T  
Sbjct: 140 GLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITG 132
           +   E+       T+  D+ S   ++ E+++ 
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 228

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR------ISPVEGGTHMSTTI 102
           G+ YL  GL    + RD+ + N L+ + +  K+ DFG SR         V G T +    
Sbjct: 170 GMVYL-AGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRW 226
Query: 103 AGTAGFLNTELTEKSDVDSFEIVILEIIT 131
                 L  + T +SDV SF +V+ EI T
Sbjct: 227 MPPESILYRKFTTESDVWSFGVVLWEIFT 255

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
Query: 33  NPELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR---- 88
           NP + D  G       G+++L        + RD+ + N +L+EK   K+ADFG +R    
Sbjct: 129 NPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 185
Query: 89  --ISPVEGGTHMSTTIAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
                V   T     +   A       + T KSDV SF +++ E++T
Sbjct: 186 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ D+G +R +  E   +++T        
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATRWYRAPEI 193
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTG 219

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
Query: 33  NPELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR---- 88
           NP + D  G       G+++L        + RD+ + N +L+EK   K+ADFG +R    
Sbjct: 127 NPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 183
Query: 89  --ISPVEGGTHMSTTIAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
                V   T     +   A       + T KSDV SF +++ E++T
Sbjct: 184 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 11/92 (11%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            LEYLH      ++ RD+K  N++L++    K+ DFG  +    +G T    T  GT  +
Sbjct: 117 ALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKTFCGTPEY 171
Query: 109 LNTELTEKSD----VDSF--EIVILEIITGIL 134
           L  E+ E +D    VD +   +V+ E++ G L
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 203

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
Query: 33  NPELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR---- 88
           NP + D  G       G+++L        + RD+ + N +L+EK   K+ADFG +R    
Sbjct: 130 NPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLD 186
Query: 89  --ISPVEGGTHMSTTIAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
                V   T     +   A       + T KSDV SF +++ E++T
Sbjct: 187 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 233

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
Query: 33  NPELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR---- 88
           NP + D  G       G+++L        + RD+ + N +L+EK   K+ADFG +R    
Sbjct: 130 NPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 186
Query: 89  --ISPVEGGTHMSTTIAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
                V   T     +   A       + T KSDV SF +++ E++T
Sbjct: 187 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 233

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 9/68 (13%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLN---EKVQAKLADFGQSRISPVEGGTHMSTTIAGT 105
            ++YLH+   + II RD+K  N+LL+   E    K+ DFG S+I    G T +  T+ GT
Sbjct: 126 AVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSLMRTLCGT 179
Query: 106 AGFLNTEL 113
             +L  E+
Sbjct: 180 PTYLAPEV 187

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 9/68 (13%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLN---EKVQAKLADFGQSRISPVEGGTHMSTTIAGT 105
            ++YLH+   + II RD+K  N+LL+   E    K+ DFG S+I    G T +  T+ GT
Sbjct: 126 AVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSLMRTLCGT 179
Query: 106 AGFLNTEL 113
             +L  E+
Sbjct: 180 PTYLAPEV 187

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 10/94 (10%)
Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
           C G+EYL  G K   I R++ + NIL+  + + K+ DFG +++ P +   +       + 
Sbjct: 125 CKGMEYL--GTKR-YIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESP 181
Query: 107 GFLNT--ELTEK-----SDVDSFEIVILEIITGI 133
            F      LTE      SDV SF +V+ E+ T I
Sbjct: 182 IFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 215

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 9/68 (13%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLN---EKVQAKLADFGQSRISPVEGGTHMSTTIAGT 105
            ++YLH+   + II RD+K  N+LL+   E    K+ DFG S+I    G T +  T+ GT
Sbjct: 126 AVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSLMRTLCGT 179
Query: 106 AGFLNTEL 113
             +L  E+
Sbjct: 180 PTYLAPEV 187

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 9/68 (13%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLN---EKVQAKLADFGQSRISPVEGGTHMSTTIAGT 105
            ++YLH+   + II RD+K  N+LL+   E    K+ DFG S+I    G T +  T+ GT
Sbjct: 125 AVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSLMRTLCGT 178
Query: 106 AGFLNTEL 113
             +L  E+
Sbjct: 179 PTYLAPEV 186

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 11/92 (11%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            LEYLH      ++ RD+K  N++L++    K+ DFG  +    +G T    T  GT  +
Sbjct: 120 ALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKTFCGTPEY 174
Query: 109 LNTELTEKSD----VDSF--EIVILEIITGIL 134
           L  E+ E +D    VD +   +V+ E++ G L
Sbjct: 175 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 206

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
Query: 33  NPELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR---- 88
           NP + D  G       G+++L        + RD+ + N +L+EK   K+ADFG +R    
Sbjct: 129 NPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 185
Query: 89  --ISPVEGGTHMSTTIAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
                V   T     +   A       + T KSDV SF +++ E++T
Sbjct: 186 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
Query: 33  NPELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR---- 88
           NP + D  G       G+++L        + RD+ + N +L+EK   K+ADFG +R    
Sbjct: 134 NPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 190
Query: 89  --ISPVEGGTHMSTTIAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
                V   T     +   A       + T KSDV SF +++ E++T
Sbjct: 191 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 237

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 14/93 (15%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQA-KLADFGQSRISPVEGGTHMSTTIAGTAG 107
           GL+YLH    + I+ RD+K  N+L+N      K++DFG S+   + G    + T  GT  
Sbjct: 134 GLKYLHD---NQIVHRDIKGDNVLINTYSGVLKISDFGTSK--RLAGINPCTETFTGTLQ 188
Query: 108 FLNTELTEK--------SDVDSFEIVILEIITG 132
           ++  E+ +K        +D+ S    I+E+ TG
Sbjct: 189 YMAPEIIDKGPRGYGKAADIWSLGCTIIEMATG 221

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRIS-PVEGGTHMSTTIAGTAG 107
           GL+Y+H      ++ RD+K +N+LLN     K+ DFG +R++ P    T   T    T  
Sbjct: 138 GLKYIHSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITG 132
           +   E+       T+  D+ S   ++ E+++ 
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 226

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 14/93 (15%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQA-KLADFGQSRISPVEGGTHMSTTIAGTAG 107
           GL+YLH    + I+ RD+K  N+L+N      K++DFG S+   + G    + T  GT  
Sbjct: 120 GLKYLHD---NQIVHRDIKGDNVLINTYSGVLKISDFGTSK--RLAGINPCTETFTGTLQ 174
Query: 108 FLNTELTEK--------SDVDSFEIVILEIITG 132
           ++  E+ +K        +D+ S    I+E+ TG
Sbjct: 175 YMAPEIIDKGPRGYGKAADIWSLGCTIIEMATG 207

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
Query: 33  NPELVDQQGKEEVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR---- 88
           NP + D  G       G+++L        + RD+ + N +L+EK   K+ADFG +R    
Sbjct: 188 NPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 244
Query: 89  --ISPVEGGTHMSTTIAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
                V   T     +   A       + T KSDV SF +++ E++T
Sbjct: 245 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 291

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 9/68 (13%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLN---EKVQAKLADFGQSRISPVEGGTHMSTTIAGT 105
            ++YLH+   + II RD+K  N+LL+   E    K+ DFG S+I    G T +  T+ GT
Sbjct: 132 AVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSLMRTLCGT 185
Query: 106 AGFLNTEL 113
             +L  E+
Sbjct: 186 PTYLAPEV 193

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 11/92 (11%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            LEYLH      ++ RD+K  N++L++    K+ DFG  +    +G T    T  GT  +
Sbjct: 117 ALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKTFCGTPEY 171
Query: 109 LNTELTEKSD----VDSF--EIVILEIITGIL 134
           L  E+ E +D    VD +   +V+ E++ G L
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 203

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG  R +  E   +++T        
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATRWYRAPEI 193
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTG 219

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E    ++T        
Sbjct: 157 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATRWYRAPEI 213
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTG 239

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 10/91 (10%)
Query: 53  LHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE 112
           LH   +  +I RD+K  N+L+  K + K+ADFG S    V   +     + GT  +L  E
Sbjct: 128 LHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS----VHAPSLRRRXMCGTLDYLPPE 183
Query: 113 L------TEKSDVDSFEIVILEIITGILTVD 137
           +       EK D+    ++  E + G+   D
Sbjct: 184 MIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 10/91 (10%)
Query: 53  LHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE 112
           LH   +  +I RD+K  N+L+  K + K+ADFG S    V   +     + GT  +L  E
Sbjct: 127 LHYCHERKVIHRDIKPENLLMGYKGELKIADFGWS----VHAPSLRRRXMCGTLDYLPPE 182
Query: 113 L------TEKSDVDSFEIVILEIITGILTVD 137
           +       EK D+    ++  E + G+   D
Sbjct: 183 MIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 9/68 (13%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLN---EKVQAKLADFGQSRISPVEGGTHMSTTIAGT 105
            ++YLH+   + II RD+K  N+LL+   E    K+ DFG S+I    G T +  T+ GT
Sbjct: 251 AVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSLMRTLCGT 304
Query: 106 AGFLNTEL 113
             +L  E+
Sbjct: 305 PTYLAPEV 312

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E    ++T        
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATRWYRAPEI 193
Query: 109 LNTELTEKSDVDSFEI--VILEIITG 132
           +   +     VD + +  ++ E++TG
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTG 219

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 9/68 (13%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLN---EKVQAKLADFGQSRISPVEGGTHMSTTIAGT 105
            ++YLH+   + II RD+K  N+LL+   E    K+ DFG S+I    G T +  T+ GT
Sbjct: 265 AVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSLMRTLCGT 318
Query: 106 AGFLNTEL 113
             +L  E+
Sbjct: 319 PTYLAPEV 326

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRIS-PVEGGTHMSTTIAGTAG 107
           GL+Y+H      ++ RD+K +N+LLN     K+ DFG +R++ P    T   T    T  
Sbjct: 136 GLKYIHSA---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITG 132
           +   E+       T+  D+ S   ++ E+++ 
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 224

>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 25/111 (22%)
Query: 49  GLEYLHQ--------GLKHPIIQRDMKSTNILLNEKVQAKLADFGQS-RISPVE--GGTH 97
           GL YLH+        G K  I  RD KS N+LL   + A LADFG + R  P +  G TH
Sbjct: 124 GLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTH 183
Query: 98  MSTTIAGTAGFLNTELTE-----------KSDVDSFEIVILEIITGILTVD 137
                 GT  ++  E+ E           + D+ +  +V+ E+++     D
Sbjct: 184 GQV---GTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI-------SPVEGGTHMSTT 101
           G++YL        + RD+ + NIL+N  +  K++DFG SR+       +    G  +   
Sbjct: 122 GMKYLSD---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIR 178
Query: 102 IAGTAGFLNTELTEKSDVDSFEIVILEIIT 131
                     + T  SDV S+ IV+ E+++
Sbjct: 179 WTAPEAIAYRKFTSASDVWSYGIVMWEVMS 208

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI-------SPVEGGTHMSTT 101
           G++YL        + RD+ + NIL+N  +  K++DFG SR+       +    G  +   
Sbjct: 128 GMKYLSD---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIR 184
Query: 102 IAGTAGFLNTELTEKSDVDSFEIVILEIIT 131
                     + T  SDV S+ IV+ E+++
Sbjct: 185 WTAPEAIAYRKFTSASDVWSYGIVMWEVMS 214

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI--SPVEGGTHMSTTIAGTA 106
           GL + H    H ++ RD+K  N+L+N +   KLADFG +R    PV   TH   T+   A
Sbjct: 115 GLSFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 171

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRIS-PVEGGTHMSTTIAGTAG 107
           GL+Y+H      ++ RD+K +N+L+N     K+ DFG +RI+ P    T   T    T  
Sbjct: 156 GLKYIHSA---NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRW 212
Query: 108 FLNTEL-------TEKSDVDSFEIVILEIIT 131
           +   E+       T+  D+ S   ++ E+++
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 14/92 (15%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQ---AKLADFGQSRISPVEGGTHMSTTIAGT 105
           G  YLH   KH I+ RD+K  N+LL  K +    K+ DFG S  +  E G  M   + GT
Sbjct: 133 GTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLS--AHFEVGGKMKERL-GT 186
Query: 106 AGFLNTEL-----TEKSDVDSFEIVILEIITG 132
           A ++  E+      EK DV S  +++  ++ G
Sbjct: 187 AYYIAPEVLRKKYDEKCDVWSCGVILYILLCG 218

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI-SPVEGGTHMSTTIAGTAG 107
           GL YLH    H +I RD+K+ NILL+E    KL DFG + I +P       +    GT  
Sbjct: 166 GLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-------ANXFVGTPY 215
Query: 108 FLNTELTEKSDVDSFEIVILEIITGILTVDLS 139
           ++  E+    D   ++  +     GI  ++L+
Sbjct: 216 WMAPEVILAMDEGQYDGKVDVWSLGITCIELA 247

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 11/90 (12%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G+ YLH    H I+ RD+  +N+LL   +  K+ADFG +    +    H   T+ GT  +
Sbjct: 124 GMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHY--TLCGTPNY 178
Query: 109 LNTELTEK------SDVDSFEIVILEIITG 132
           ++ E+  +      SDV S   +   ++ G
Sbjct: 179 ISPEIATRSAHGLESDVWSLGCMFYTLLIG 208

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 14/92 (15%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQA---KLADFGQSRISPVEGGTHMSTTIAGT 105
           G+ YLH   KH I+ RD+K  N+LL  K +    K+ DFG S +   E    M   + GT
Sbjct: 148 GVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAV--FENQKKMKERL-GT 201
Query: 106 AGFLNTEL-----TEKSDVDSFEIVILEIITG 132
           A ++  E+      EK DV S  +++  ++ G
Sbjct: 202 AYYIAPEVLRKKYDEKCDVWSIGVILFILLAG 233

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 15/91 (16%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            LE+LH  L   +I RD+K +N+L+N   Q K+ DFG   IS     +   T  AG   +
Sbjct: 165 ALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFG---ISGYLVDSVAKTIDAGCKPY 219
Query: 109 L-----NTELTE-----KSDVDSFEIVILEI 129
           +     N EL +     KSD+ S  I ++E+
Sbjct: 220 MAPERINPELNQKGYSVKSDIWSLGITMIEL 250

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI--SPVEGGTHMSTTIAGTA 106
           GL + H    H ++ RD+K  N+L+N +   KLADFG +R    PV   TH   T+   A
Sbjct: 114 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 170

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 13/90 (14%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            L Y H      +I RD+K  N+LL    + K+ADFG S    V   +     + GT  +
Sbjct: 120 ALSYCHSK---KVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRAALCGTLDY 172
Query: 109 LNTEL------TEKSDVDSFEIVILEIITG 132
           L  E+       EK D+ S  ++  E + G
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 202

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 13/96 (13%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            ++Y HQ     I+ RD+K+ N+LL+  +  K+ADFG S    V G      T  G+  +
Sbjct: 123 AVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL---DTFCGSPPY 176
Query: 109 LNTELTE-------KSDVDSFEIVILEIITGILTVD 137
              EL +       + DV S  +++  +++G L  D
Sbjct: 177 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 12/100 (12%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI-----SPVEGGTHMSTTIA 103
            +EYL    K   I RD+ + N L+ E    K+ADFG SR+          G        
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 104 GTAGFLNTELTEKSDVDSFEIVILEIITGILT----VDLS 139
                   + + KSDV +F +++ EI T  ++    +DLS
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 219

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI--SPVEGGTHMSTTIAGTA 106
           GL + H    H ++ RD+K  N+L+N +   KLADFG +R    PV   TH   T+   A
Sbjct: 115 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 171

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI--SPVEGGTHMSTTIAGTA 106
           GL + H    H ++ RD+K  N+L+N +   KLADFG +R    PV   TH   T+   A
Sbjct: 114 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 170

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVE-GGTHMSTTIAGTAG 107
           GL Y+H      II RD+K  N+ +NE  + K+ DFG +R +  E  G  ++        
Sbjct: 140 GLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTRWYRAPEV 196
Query: 108 FLNT-ELTEKSDVDSFEIVILEIITG 132
            LN    T+  D+ S   ++ E+ITG
Sbjct: 197 ILNWMRYTQTVDIWSVGCIMAEMITG 222

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI--SPVEGGTHMSTTIAGTA 106
           GL + H    H ++ RD+K  N+L+N +   KLADFG +R    PV   TH   T+   A
Sbjct: 115 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 171

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI--SPVEGGTHMSTTIAGTA 106
           GL + H    H ++ RD+K  N+L+N +   KLADFG +R    PV   TH   T+   A
Sbjct: 114 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 170

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 12/100 (12%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI-----SPVEGGTHMSTTIA 103
            +EYL    K   I RD+ + N L+ E    K+ADFG SR+          G        
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 104 GTAGFLNTELTEKSDVDSFEIVILEIITGILT----VDLS 139
                   + + KSDV +F +++ EI T  ++    +DLS
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 219

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI--SPVEGGTHMSTTIAGTA 106
           GL + H    H ++ RD+K  N+L+N +   KLADFG +R    PV   TH   T+   A
Sbjct: 116 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 172

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 12/100 (12%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI-----SPVEGGTHMSTTIA 103
            +EYL    K   I RD+ + N L+ E    K+ADFG SR+          G        
Sbjct: 124 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT 180
Query: 104 GTAGFLNTELTEKSDVDSFEIVILEIITGILT----VDLS 139
                   + + KSDV +F +++ EI T  ++    +DLS
Sbjct: 181 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 220

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI--SPVEGGTHMSTTIAGTA 106
           GL + H    H ++ RD+K  N+L+N +   KLADFG +R    PV   TH   T+   A
Sbjct: 115 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 171

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 12/100 (12%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI-----SPVEGGTHMSTTIA 103
            +EYL    K   I RD+ + N L+ E    K+ADFG SR+          G        
Sbjct: 128 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT 184
Query: 104 GTAGFLNTELTEKSDVDSFEIVILEIITGILT----VDLS 139
                   + + KSDV +F +++ EI T  ++    +DLS
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 224

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI--SPVEGGTHMSTTIAGTA 106
           GL + H    H ++ RD+K  N+L+N +   KLADFG +R    PV   TH   T+   A
Sbjct: 115 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 171

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI--SPVEGGTHMSTTIAGTA 106
           GL + H    H ++ RD+K  N+L+N +   KLADFG +R    PV   TH   T+   A
Sbjct: 119 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 175

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 12/100 (12%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI-----SPVEGGTHMSTTIA 103
            +EYL    K   I RD+ + N L+ E    K+ADFG SR+          G        
Sbjct: 136 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 192
Query: 104 GTAGFLNTELTEKSDVDSFEIVILEIITGILT----VDLS 139
                   + + KSDV +F +++ EI T  ++    +DLS
Sbjct: 193 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 232

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR----ISPVEGGTHMSTTIAG 104
           G+EYL        I RD+ + N+L+ E    K+ADFG +R    I   +  T+    +  
Sbjct: 169 GMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKW 225
Query: 105 TA--GFLNTELTEKSDVDSFEIVILEIIT 131
            A     +   T +SDV SF +++ EI T
Sbjct: 226 MAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 12/100 (12%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI-----SPVEGGTHMSTTIA 103
            +EYL    K   I RD+ + N L+ E    K+ADFG SR+          G        
Sbjct: 127 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 183
Query: 104 GTAGFLNTELTEKSDVDSFEIVILEIITGILT----VDLS 139
                   + + KSDV +F +++ EI T  ++    +DLS
Sbjct: 184 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 223

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI--SPVEGGTHMSTTIAGTA 106
           GL + H    H ++ RD+K  N+L+N +   KLADFG +R    PV   TH   T+   A
Sbjct: 114 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 170

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 13/90 (14%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            L Y H      +I RD+K  N+LL    + K+ADFG S    V   +     + GT  +
Sbjct: 120 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRAALCGTLDY 172
Query: 109 LNTEL------TEKSDVDSFEIVILEIITG 132
           L  E+       EK D+ S  ++  E + G
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 202

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 8/88 (9%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI-----SPVEGGTHMSTTIA 103
            +EYL    K   I RD+ + N L+ E    K+ADFG SR+          G        
Sbjct: 121 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT 177
Query: 104 GTAGFLNTELTEKSDVDSFEIVILEIIT 131
                   + + KSDV +F +++ EI T
Sbjct: 178 APESLAYNKFSIKSDVWAFGVLLWEIAT 205

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 40.4 bits (93), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI--SPVEGGTHMSTTIAGTA 106
           GL + H    H ++ RD+K  N+L+N +   KLADFG +R    PV   TH   T+   A
Sbjct: 122 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 178

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 12/100 (12%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI-----SPVEGGTHMSTTIA 103
            +EYL    K   I RD+ + N L+ E    K+ADFG SR+          G        
Sbjct: 128 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 184
Query: 104 GTAGFLNTELTEKSDVDSFEIVILEIITGILT----VDLS 139
                   + + KSDV +F +++ EI T  ++    +DLS
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 224

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI--SPVEGGTHMSTTIAGTA 106
           GL + H    H ++ RD+K  N+L+N +   KLADFG +R    PV   TH   T+   A
Sbjct: 122 GLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 178

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 13/90 (14%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            L Y H      +I RD+K  N+LL    + K+ADFG S    V   +     + GT  +
Sbjct: 123 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRAALCGTLDY 175
Query: 109 LNTEL------TEKSDVDSFEIVILEIITG 132
           L  E+       EK D+ S  ++  E + G
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 205

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 21/100 (21%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI-----SPVEGGTHMS---- 99
           G+ YLH      II RD+ S N L+ E     +ADFG +R+     +  EG   +     
Sbjct: 120 GMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDR 176
Query: 100 ---TTIAGTAGFLNTEL------TEKSDVDSFEIVILEII 130
               T+ G   ++  E+       EK DV SF IV+ EII
Sbjct: 177 KKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 12/100 (12%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI-----SPVEGGTHMSTTIA 103
            +EYL    K   I RD+ + N L+ E    K+ADFG SR+          G        
Sbjct: 128 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 184
Query: 104 GTAGFLNTELTEKSDVDSFEIVILEIITGILT----VDLS 139
                   + + KSDV +F +++ EI T  ++    +DLS
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 224

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI-------SPVEGGTHMSTT 101
           G++YL        + RD+ + NIL+N  +  K++DFG SR+       +    G  +   
Sbjct: 143 GMKYLSD---MSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIR 199
Query: 102 IAGTAGFLNTELTEKSDVDSFEIVILEIIT 131
                     + T  SDV S+ IV+ E+++
Sbjct: 200 WTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 12/100 (12%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI-----SPVEGGTHMSTTIA 103
            +EYL    K   I RD+ + N L+ E    K+ADFG SR+          G        
Sbjct: 125 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 181
Query: 104 GTAGFLNTELTEKSDVDSFEIVILEIITGILT----VDLS 139
                   + + KSDV +F +++ EI T  ++    +DLS
Sbjct: 182 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 221

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 12/100 (12%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI-----SPVEGGTHMSTTIA 103
            +EYL    K   I RD+ + N L+ E    K+ADFG SR+          G        
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 104 GTAGFLNTELTEKSDVDSFEIVILEIITGILT----VDLS 139
                   + + KSDV +F +++ EI T  ++    +DLS
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 219

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 12/100 (12%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI-----SPVEGGTHMSTTIA 103
            +EYL    K   I RD+ + N L+ E    K+ADFG SR+          G        
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 104 GTAGFLNTELTEKSDVDSFEIVILEIITGILT----VDLS 139
                   + + KSDV +F +++ EI T  ++    +DLS
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 219

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 8/88 (9%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI-----SPVEGGTHMSTTIA 103
            +EYL    K   I RD+ + N L+ E    K+ADFG SR+          G        
Sbjct: 121 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT 177
Query: 104 GTAGFLNTELTEKSDVDSFEIVILEIIT 131
                   + + KSDV +F +++ EI T
Sbjct: 178 APESLAYNKFSIKSDVWAFGVLLWEIAT 205

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 12/100 (12%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI-----SPVEGGTHMSTTIA 103
            +EYL    K   I RD+ + N L+ E    K+ADFG SR+          G        
Sbjct: 128 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 184
Query: 104 GTAGFLNTELTEKSDVDSFEIVILEIITGILT----VDLS 139
                   + + KSDV +F +++ EI T  ++    +DLS
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 224

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI-SPVEGGTHMSTTIAGTAG 107
           GL YLH    H +I RD+K+ NILL+E    KL DFG + I +P       +    GT  
Sbjct: 127 GLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-------ANXFVGTPY 176
Query: 108 FLNTELTEKSDVDSFEIVILEIITGILTVDLS 139
           ++  E+    D   ++  +     GI  ++L+
Sbjct: 177 WMAPEVILAMDEGQYDGKVDVWSLGITCIELA 208

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 12/100 (12%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI-----SPVEGGTHMSTTIA 103
            +EYL    K   I RD+ + N L+ E    K+ADFG SR+          G        
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 104 GTAGFLNTELTEKSDVDSFEIVILEIITGILT----VDLS 139
                   + + KSDV +F +++ EI T  ++    +DLS
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 219

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 12/100 (12%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI-----SPVEGGTHMSTTIA 103
            +EYL    K   I RD+ + N L+ E    K+ADFG SR+          G        
Sbjct: 125 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 181
Query: 104 GTAGFLNTELTEKSDVDSFEIVILEIITGILT----VDLS 139
                   + + KSDV +F +++ EI T  ++    +DLS
Sbjct: 182 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 221

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 12/100 (12%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI-----SPVEGGTHMSTTIA 103
            +EYL    K   I RD+ + N L+ E    K+ADFG SR+          G        
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 104 GTAGFLNTELTEKSDVDSFEIVILEIITGILT----VDLS 139
                   + + KSDV +F +++ EI T  ++    +DLS
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 219

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 12/100 (12%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI-----SPVEGGTHMSTTIA 103
            +EYL    K   I RD+ + N L+ E    K+ADFG SR+          G        
Sbjct: 128 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 184
Query: 104 GTAGFLNTELTEKSDVDSFEIVILEIITGILT----VDLS 139
                   + + KSDV +F +++ EI T  ++    +DLS
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 224

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 16/102 (15%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT-----IA 103
            +EYL    K   I RD+ + N L+ E    K+ADFG SR+  + G T+ +       I 
Sbjct: 124 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAPAGAKFPIK 178
Query: 104 GTA--GFLNTELTEKSDVDSFEIVILEIITGILT----VDLS 139
            TA       + + KSDV +F +++ EI T  ++    +DLS
Sbjct: 179 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 220

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G++YLH      +I RD+K  N+ LN+ +  K+ DFG +  + +E        + GT  +
Sbjct: 154 GVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLA--TKIEFDGERKKXLCGTPNY 208
Query: 109 LNTELTEKSDVDSFEIVILEI 129
           +  E+  K    SFE+ I  +
Sbjct: 209 IAPEVLCKKG-HSFEVDIWSL 228

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 40.0 bits (92), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR----ISPVEGGTHMSTTIAG 104
           G+EYL        I RD+ + N+L+ E    K+ADFG +R    I   +  T+    +  
Sbjct: 158 GMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKW 214
Query: 105 TA--GFLNTELTEKSDVDSFEIVILEIIT 131
            A     +   T +SDV SF +++ EI T
Sbjct: 215 MAPEALFDRVYTHQSDVWSFGVLMWEIFT 243

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 11/90 (12%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL++LH      I+ RD+K  NILL++    K+ADFG  + + +  G   +    GT  +
Sbjct: 130 GLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENML--GDAKTNXFCGTPDY 184
Query: 109 LNTEL------TEKSDVDSFEIVILEIITG 132
           +  E+          D  SF +++ E++ G
Sbjct: 185 IAPEILLGQKYNHSVDWWSFGVLLYEMLIG 214

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR----ISPVEGGTHMSTTIAG 104
           G+EYL        I RD+ + N+L+ E    K+ADFG +R    I   +  T+    +  
Sbjct: 156 GMEYLAS---QKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKW 212
Query: 105 TA--GFLNTELTEKSDVDSFEIVILEIIT 131
            A     +   T +SDV SF +++ EI T
Sbjct: 213 MAPEALFDRVYTHQSDVWSFGVLMWEIFT 241

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 16/102 (15%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT-----IA 103
            +EYL    K   I RD+ + N L+ E    K+ADFG SR+  + G T+ +       I 
Sbjct: 125 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAPAGAKFPIK 179
Query: 104 GTA--GFLNTELTEKSDVDSFEIVILEIITGILT----VDLS 139
            TA       + + KSDV +F +++ EI T  ++    +DLS
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 221

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR----ISPVEGGTHMSTTIAG 104
           G+EYL        I RD+ + N+L+ E    K+ADFG +R    I   +  T+    +  
Sbjct: 161 GMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKW 217
Query: 105 TA--GFLNTELTEKSDVDSFEIVILEIIT 131
            A     +   T +SDV SF +++ EI T
Sbjct: 218 MAPEALFDRVYTHQSDVWSFGVLMWEIFT 246

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR----ISPVEGGTHMSTTIAG 104
           G+EYL        I RD+ + N+L+ E    K+ADFG +R    I   +  T+    +  
Sbjct: 169 GMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKW 225
Query: 105 TA--GFLNTELTEKSDVDSFEIVILEIIT 131
            A     +   T +SDV SF +++ EI T
Sbjct: 226 MAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 13/96 (13%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            ++Y HQ     I+ RD+K+ N+LL+  +  K+ADFG S  +    G  +  T  G+  +
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS--NEFTFGNKLD-TFCGSPPY 178
Query: 109 LNTELTE-------KSDVDSFEIVILEIITGILTVD 137
              EL +       + DV S  +++  +++G L  D
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 13/96 (13%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            ++Y HQ     I+ RD+K+ N+LL+  +  K+ADFG S  +    G  +  T  G+  +
Sbjct: 118 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS--NEFTFGNKLD-TFCGSPPY 171
Query: 109 LNTELTE-------KSDVDSFEIVILEIITGILTVD 137
              EL +       + DV S  +++  +++G L  D
Sbjct: 172 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR----ISPVEGGTHMSTTIAG 104
           G+EYL        I RD+ + N+L+ E    K+ADFG +R    I   +  T+    +  
Sbjct: 169 GMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKW 225
Query: 105 TA--GFLNTELTEKSDVDSFEIVILEIIT 131
            A     +   T +SDV SF +++ EI T
Sbjct: 226 MAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR----ISPVEGGTHMSTTIAG 104
           G+EYL        I RD+ + N+L+ E    K+ADFG +R    I   +  T+    +  
Sbjct: 169 GMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKW 225
Query: 105 TA--GFLNTELTEKSDVDSFEIVILEIIT 131
            A     +   T +SDV SF +++ EI T
Sbjct: 226 MAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 13/96 (13%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            ++Y HQ     I+ RD+K+ N+LL+  +  K+ADFG S  +    G  +  T  G+  +
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS--NEFTFGNKLD-TFCGSPPY 178
Query: 109 LNTELTE-------KSDVDSFEIVILEIITGILTVD 137
              EL +       + DV S  +++  +++G L  D
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR----ISPVEGGTHMSTTIAG 104
           G+EYL        I RD+ + N+L+ E    K+ADFG +R    I   +  T+    +  
Sbjct: 169 GMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKW 225
Query: 105 TA--GFLNTELTEKSDVDSFEIVILEIIT 131
            A     +   T +SDV SF +++ EI T
Sbjct: 226 MAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR----ISPVEGGTHMSTTIAG 104
           G+EYL        I RD+ + N+L+ E    K+ADFG +R    I   +  T+    +  
Sbjct: 169 GMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKW 225
Query: 105 TA--GFLNTELTEKSDVDSFEIVILEIIT 131
            A     +   T +SDV SF +++ EI T
Sbjct: 226 MAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 40.0 bits (92), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G++YLH      +I RD+K  N+ LN+ +  K+ DFG +  + +E        + GT  +
Sbjct: 154 GVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLA--TKIEFDGERKKDLCGTPNY 208
Query: 109 LNTELTEKSDVDSFEIVILEI 129
           +  E+  K    SFE+ I  +
Sbjct: 209 IAPEVLCKKG-HSFEVDIWSL 228

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 40.0 bits (92), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G++YLH      +I RD+K  N+ LN+ +  K+ DFG +  + +E        + GT  +
Sbjct: 138 GVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLA--TKIEFDGERKKDLCGTPNY 192
Query: 109 LNTELTEKSDVDSFEIVILEI 129
           +  E+  K    SFE+ I  +
Sbjct: 193 IAPEVLCKKG-HSFEVDIWSL 212

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 40.0 bits (92), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 13/96 (13%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            ++Y HQ     I+ RD+K+ N+LL+  +  K+ADFG S  +    G  +  T  G+  +
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS--NEFTFGNKLD-TFCGSPPY 178
Query: 109 LNTELTE-------KSDVDSFEIVILEIITGILTVD 137
              EL +       + DV S  +++  +++G L  D
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 40.0 bits (92), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 11/96 (11%)
Query: 44  EVC---CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI-----SPVEGG 95
           E+C   C  +EYL        + RD+ + N L+N++   K++DFG SR           G
Sbjct: 109 EMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRG 165
Query: 96  THMSTTIAGTAGFLNTELTEKSDVDSFEIVILEIIT 131
           +      +     + ++ + KSD+ +F +++ EI +
Sbjct: 166 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 39.7 bits (91), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 13/90 (14%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            L Y H      +I RD+K  N+LL    + K+ADFG S    V   +     + GT  +
Sbjct: 122 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRXXLCGTLDY 174
Query: 109 LNTEL------TEKSDVDSFEIVILEIITG 132
           L  E+       EK D+ S  ++  E + G
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 204

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 39.7 bits (91), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR----ISPVEGGTHMSTTIAG 104
           G+EYL        I RD+ + N+L+ E    K+ADFG +R    I   +  T+    +  
Sbjct: 169 GMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKW 225
Query: 105 TA--GFLNTELTEKSDVDSFEIVILEIIT 131
            A     +   T +SDV SF +++ EI T
Sbjct: 226 MAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 39.7 bits (91), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 13/90 (14%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            L Y H      +I RD+K  N+LL    + K+ADFG S    V   +     + GT  +
Sbjct: 146 ALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRDDLCGTLDY 198
Query: 109 LNTEL------TEKSDVDSFEIVILEIITG 132
           L  E+       EK D+ S  ++  E + G
Sbjct: 199 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 228

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 39.7 bits (91), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 19/105 (18%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            L YLH+     II RD+K  N+LL+ +   KL D+G  +     G T  ++T  GT  +
Sbjct: 165 ALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSTFCGTPNY 219
Query: 109 LNTELTEKSD----VDSFE--IVILEIITGILTVDLSFKGEFDII 147
           +  E+    D    VD +   +++ E++ G        +  FDI+
Sbjct: 220 IAPEILRGEDYGFSVDWWALGVLMFEMMAG--------RSPFDIV 256

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 39.7 bits (91), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR----ISPVEGGTHMSTTIAG 104
           G+EYL        I RD+ + N+L+ E    K+ADFG +R    I   +  T+    +  
Sbjct: 215 GMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKW 271
Query: 105 TA--GFLNTELTEKSDVDSFEIVILEIIT 131
            A     +   T +SDV SF +++ EI T
Sbjct: 272 MAPEALFDRVYTHQSDVWSFGVLMWEIFT 300

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	188
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	4e-43
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	4e-39
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	1e-37
3soc_A	322	Activin receptor type-2A; structural genomics cons	2e-21
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	8e-21
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	8e-20
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	9e-19
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	9e-19
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	3e-18
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	1e-17
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	3e-17
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	5e-17
3q4u_A	301	Activin receptor type-1; structural genomics conso	8e-17
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	2e-16
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	4e-16
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	1e-15
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	2e-15
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	5e-14
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	8e-14
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	3e-13
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	4e-13
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	6e-13
2dyl_A	318	Dual specificity mitogen-activated protein kinase	6e-13
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	1e-12
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	1e-12
3fme_A	290	Dual specificity mitogen-activated protein kinase;	2e-12
3aln_A	327	Dual specificity mitogen-activated protein kinase;	2e-12
3an0_A	340	Dual specificity mitogen-activated protein kinase;	2e-12
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	6e-12
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	2e-11
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	4e-11
2a19_B	284	Interferon-induced, double-stranded RNA-activated	4e-11
3ork_A	311	Serine/threonine protein kinase; structural genomi	5e-11
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	6e-11
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	7e-11
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	1e-10
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	1e-10
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	3e-10
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	4e-10
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	5e-10
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	7e-10
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	8e-10
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	1e-09
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	1e-09
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	1e-09
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	1e-09
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	1e-09
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	1e-09
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	1e-09
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	1e-09
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	1e-09
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	1e-09
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	2e-09
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	2e-09
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	2e-09
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	3e-09
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	3e-09
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	4e-09
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	5e-09
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	6e-09
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	6e-09
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	7e-09
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	8e-09
3o0g_A	292	Cell division protein kinase 5; kinase activator c	9e-09
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	9e-09
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	9e-09
3niz_A	311	Rhodanese family protein; structural genomics, str	1e-08
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	1e-08
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	1e-08
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-08
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	1e-08
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	1e-08
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	1e-08
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	1e-08
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	1e-08
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	1e-08
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	1e-08
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	1e-08
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	2e-08
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	2e-08
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	2e-08
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	2e-08
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	2e-08
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	2e-08
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	2e-08
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-08
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	2e-08
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	2e-08
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	2e-08
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	2e-08
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	3e-08
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	3e-08
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	4e-08
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	4e-08
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	5e-08
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	5e-08
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	7e-08
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	7e-08
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	7e-08
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	7e-08
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	8e-08
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	8e-08
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	8e-08
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	9e-08
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	1e-07
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	1e-07
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	1e-07
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	1e-07
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	1e-07
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	1e-07
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	1e-07
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	2e-07
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	2e-07
3bhy_A	283	Death-associated protein kinase 3; death associate	2e-07
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	2e-07
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	2e-07
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	2e-07
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-07
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	2e-07
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	2e-07
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	2e-07
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	2e-07
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	2e-07
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	3e-07
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	3e-07
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	3e-07
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	4e-07
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	4e-07
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	4e-07
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	5e-07
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	5e-07
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	5e-07
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	6e-07
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	6e-07
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	6e-07
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	7e-07
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	7e-07
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	8e-07
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	9e-07
3rp9_A	458	Mitogen-activated protein kinase; structural genom	9e-07
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	1e-06
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	1e-06
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	1e-06
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	1e-06
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	1e-06
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-06
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	1e-06
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	1e-06
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	1e-06
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	2e-06
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	2e-06
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	2e-06
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	2e-06
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	2e-06
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	2e-06
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	2e-06
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	3e-06
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	3e-06
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	3e-06
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	3e-06
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	3e-06
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	3e-06
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	3e-06
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	4e-06
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	4e-06
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	4e-06
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	4e-06
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	4e-06
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	5e-06
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	5e-06
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	6e-06
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	6e-06
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	7e-06
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	7e-06
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	7e-06
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	8e-06
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	8e-06
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	1e-05
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	1e-05
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	1e-05
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	1e-05
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	1e-05
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	1e-05
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	1e-05
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	2e-05
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	2e-05
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	3e-05
3pls_A	298	Macrophage-stimulating protein receptor; protein k	3e-05
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	3e-05
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	3e-05
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	3e-05
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	7e-05
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	8e-05
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	8e-05
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	1e-04
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	1e-04
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	1e-04
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	2e-04
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	2e-04
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	2e-04
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	2e-04
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	2e-04
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	3e-04
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	3e-04
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	3e-04
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	4e-04
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	5e-04
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	5e-04
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	5e-04
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	7e-04
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	8e-04
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	8e-04

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  145 bits (367), Expect = 4e-43
 Identities = 49/160 (30%), Positives = 71/160 (44%), Gaps = 37/160 (23%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL YLH      II RD+KS NILL+E    K+ DFG S+       TH+ST + GT G+
Sbjct: 151 GLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGY 207

Query: 109 LNTE------LTEKSDVDSFEIVILEIITG--------------ILT------------- 135
           ++ E      LTEKSDV SF +V+ E++                +               
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQ 267

Query: 136 -VDLSFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVV 174
            VD +   +    S+ K  + A+  ++     RP M  V+
Sbjct: 268 IVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  134 bits (340), Expect = 4e-39
 Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 34/166 (20%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G+ +LH+   +  I RD+KS NILL+E   AK++DFG +R S     T M++ I GT  +
Sbjct: 145 GINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAY 201

Query: 109 LNTE-----LTEKSDVDSFEIVILEIITGILTVDLSFK---------------------- 141
           +  E     +T KSD+ SF +V+LEIITG+  VD   +                      
Sbjct: 202 MAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYI 261

Query: 142 ----GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS 183
                + D  SVE    +A   +  K N+RP + +V  + ++ + S
Sbjct: 262 DKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  131 bits (331), Expect = 1e-37
 Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 37/162 (22%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL YLH      II RD+K+ NILL+E+ +A + DFG +++      TH++T + GT G 
Sbjct: 143 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDTHVTTAVRGTIGH 201

Query: 109 LNTE------LTEKSDVDSFEIVILEIITGILTVDLSF---------------------- 140
           +  E       +EK+DV  + +++LE+ITG    DL+                       
Sbjct: 202 IAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 261

Query: 141 --------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVV 174
                   +G +    VE+ +++A+    S    RP M++VV
Sbjct: 262 EALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVV 303

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 88.2 bits (219), Expect = 2e-21
 Identities = 32/142 (22%), Positives = 51/142 (35%), Gaps = 23/142 (16%)

Query: 49  GLEYLHQ-------GLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT 101
           GL YLH+       G K  I  RD+KS N+LL   + A +ADFG +           +  
Sbjct: 133 GLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHG 192

Query: 102 IAGTAG-----------FLNTELTEKSDVDSFEIVILEIITGILTVDLSFKGE----FDI 146
             GT                 +   + D+ +  +V+ E+ +     D           + 
Sbjct: 193 QVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEE 252

Query: 147 ISVEKAVEIAMASVSSKVNRRP 168
           I    ++E     V  K  +RP
Sbjct: 253 IGQHPSLEDMQEVVVHK-KKRP 273

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 86.2 bits (214), Expect = 8e-21
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 9/90 (10%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAG- 107
           G+ YLH     PI+ R++KS N+L+++K   K+ DFG SR+      +  S    GT   
Sbjct: 149 GMNYLHN-RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAA--GTPEW 205

Query: 108 -----FLNTELTEKSDVDSFEIVILEIITG 132
                  +    EKSDV SF +++ E+ T 
Sbjct: 206 MAPEVLRDEPSNEKSDVYSFGVILWELATL 235

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 83.5 bits (207), Expect = 8e-20
 Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 12/94 (12%)

Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILLNEK-VQAKLADFGQSRISPVEGGTHMSTTIAG 104
           C  G+ YLH      +I RD+K  N+LL       K+ DFG +            T   G
Sbjct: 111 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI-----QTHMTNNKG 165

Query: 105 TAG------FLNTELTEKSDVDSFEIVILEIITG 132
           +A       F  +  +EK DV S+ I++ E+IT 
Sbjct: 166 SAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITR 199

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 80.4 bits (199), Expect = 9e-19
 Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 12/93 (12%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGT--- 105
           G++YLH      II RD+KS NI L+E    K+ DFG +       G+H    ++G+   
Sbjct: 132 GMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 188

Query: 106 ------AGFLNTELTEKSDVDSFEIVILEIITG 132
                     +   + +SDV +F IV+ E++TG
Sbjct: 189 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTG 221

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 80.4 bits (199), Expect = 9e-19
 Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 19/97 (19%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEK-----VQAKLADFGQSRISPVEGGTHMSTTIA 103
           G+EY+      PI+ RD++S NI L        V AK+ADFG S+ S      H  + + 
Sbjct: 134 GIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS-----VHSVSGLL 187

Query: 104 GTAGFLNTEL--------TEKSDVDSFEIVILEIITG 132
           G   ++  E         TEK+D  SF +++  I+TG
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG 224

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 78.8 bits (195), Expect = 3e-18
 Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 18/101 (17%)

Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQ--------AKLADFGQSRISPVEGGTH 97
              G+ YLH     PII RD+KS+NIL+ +KV+         K+ DFG +R       T 
Sbjct: 114 IARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLARE--WHRTTK 171

Query: 98  MSTTIAGTAG------FLNTELTEKSDVDSFEIVILEIITG 132
           MS   AG            +  ++ SDV S+ +++ E++TG
Sbjct: 172 MSA--AGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTG 210

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 76.1 bits (188), Expect = 3e-17
 Identities = 14/93 (15%), Positives = 36/93 (38%), Gaps = 17/93 (18%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA-- 106
           G+ +LH  L+  I +  + S +++++E + A+++             +  S         
Sbjct: 123 GMAFLH-TLEPLIPRHALNSRSVMIDEDMTARISMADVKF-------SFQSPGRMYAPAW 174

Query: 107 -------GFLNTELTEKSDVDSFEIVILEIITG 132
                            +D+ SF +++ E++T 
Sbjct: 175 VAPEALQKKPEDTNRRSADMWSFAVLLWELVTR 207

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 76.3 bits (188), Expect = 5e-17
 Identities = 29/142 (20%), Positives = 53/142 (37%), Gaps = 23/142 (16%)

Query: 49  GLEYLH-----QGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTH--MSTT 101
           GL +LH        K  I  RD+KS NIL+ +     +AD G +     +         T
Sbjct: 146 GLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNT 205

Query: 102 IAGTA------------GFLNTELTEKSDVDSFEIVILEIITGILTVDLSFKGEF---DI 146
             GT                + +    +D+ SF +++ E+    ++  +  + +    D+
Sbjct: 206 RVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDL 265

Query: 147 ISVEKAVEIAMASVSSKVNRRP 168
           +  + + E     V  K   RP
Sbjct: 266 VPSDPSYEDMREIVCIK-KLRP 286

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 75.5 bits (186), Expect = 8e-17
 Identities = 28/142 (19%), Positives = 55/142 (38%), Gaps = 23/142 (16%)

Query: 49  GLEYLH-----QGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTH--MSTT 101
           GL +LH        K  I  RD+KS NIL+ +  Q  +AD G + +           +  
Sbjct: 117 GLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNP 176

Query: 102 IAGTA------------GFLNTELTEKSDVDSFEIVILEIITGILTVDLSFKGE---FDI 146
             GT                  +  ++ D+ +F +V+ E+   +++  +    +   +D+
Sbjct: 177 RVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDV 236

Query: 147 ISVEKAVEIAMASVSSKVNRRP 168
           +  + + E     V     +RP
Sbjct: 237 VPNDPSFEDMRKVVCVD-QQRP 257

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 73.5 bits (181), Expect = 4e-16
 Identities = 22/105 (20%), Positives = 35/105 (33%), Gaps = 22/105 (20%)

Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMS---TTI 102
              G+ YLH      I+ +D+KS N+  +      + DFG   IS V             
Sbjct: 139 IVKGMGYLHA---KGILHKDLKSKNVFYDNGK-VVITDFGLFSISGVLQAGRREDKLRIQ 194

Query: 103 AGTAGFLNTEL---------------TEKSDVDSFEIVILEIITG 132
            G    L  E+               ++ SDV +   +  E+   
Sbjct: 195 NGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAR 239

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 72.5 bits (178), Expect = 1e-15
 Identities = 28/141 (19%), Positives = 47/141 (33%), Gaps = 21/141 (14%)

Query: 49  GLEYLHQ-----GLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTH--MSTT 101
           GL +LH        K  I  RD+KS NIL+ +     +AD G +        T       
Sbjct: 151 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 210

Query: 102 IAGTA------------GFLNTELTEKSDVDSFEIVILEIITGILTVDL--SFKGEFDII 147
             GT                + E  +++D+ +  +V  EI        +   ++  +  +
Sbjct: 211 RVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL 270

Query: 148 SVEKAVEIAMASVSSKVNRRP 168
                    M  V  +   RP
Sbjct: 271 VPSDPSVEEMRKVVCEQKLRP 291

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 71.6 bits (176), Expect = 2e-15
 Identities = 31/103 (30%), Positives = 40/103 (38%), Gaps = 21/103 (20%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGT------------ 96
           G+ YLH      II RD+ S N L+ E     +ADFG +R+   E               
Sbjct: 120 GMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDR 176

Query: 97  HMSTTIAGTAG------FLNTELTEKSDVDSFEIVILEIITGI 133
               T+ G                EK DV SF IV+ EII  +
Sbjct: 177 KKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRV 219

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 67.9 bits (166), Expect = 5e-14
 Identities = 23/109 (21%), Positives = 38/109 (34%), Gaps = 25/109 (22%)

Query: 49  GLEYLHQ------GLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI------SPVEGGT 96
           GL YLH         K  I  RD+ S N+L+       ++DFG S               
Sbjct: 123 GLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEED 182

Query: 97  HMSTTIAGTA---------GFLNTE----LTEKSDVDSFEIVILEIITG 132
           + + +  GT          G +N        ++ D+ +  ++  EI   
Sbjct: 183 NAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMR 231

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 66.9 bits (164), Expect = 8e-14
 Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 10/94 (10%)

Query: 47  CPGLEYLHQ--GLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAG 104
              L+  H+     H ++ RD+K  N+ L+ K   KL DFG +RI  +   T  + T  G
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDTSFAKTFVG 178

Query: 105 TAGFLNTEL------TEKSDVDSFEIVILEIITG 132
           T  +++ E        EKSD+ S   ++ E+   
Sbjct: 179 TPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCAL 212

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 65.4 bits (160), Expect = 3e-13
 Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 11/90 (12%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKV-QAKLADFGQSRISPVEGGTHMSTTIAGTAG 107
           GL++LH     PII RD+K  NI +       K+ D G + +         +  + GT  
Sbjct: 141 GLQFLH-TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK----RASFAKAVIGTPE 195

Query: 108 F-----LNTELTEKSDVDSFEIVILEIITG 132
           F        +  E  DV +F + +LE+ T 
Sbjct: 196 FMAPEMYEEKYDESVDVYAFGMCMLEMATS 225

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 65.5 bits (160), Expect = 4e-13
 Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 11/92 (11%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
           C  L+++H      I+ RD+KS NI L +    +L DFG +R+  +     ++    GT 
Sbjct: 135 CLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARV--LNSTVELARACIGTP 189

Query: 107 GFLNTEL------TEKSDVDSFEIVILEIITG 132
            +L+ E+        KSD+ +   V+ E+ T 
Sbjct: 190 YYLSPEICENKPYNNKSDIWALGCVLYELCTL 221

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 64.9 bits (158), Expect = 6e-13
 Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 12/90 (13%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL YL +  K  I+ RD+K +NIL+N + + KL DFG S     +    M+ +  GT  +
Sbjct: 143 GLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSG----QLIDSMANSFVGTRSY 196

Query: 109 LNTEL------TEKSDVDSFEIVILEIITG 132
           ++ E       + +SD+ S  + ++E+  G
Sbjct: 197 MSPERLQGTHYSVQSDIWSMGLSLVEMAVG 226

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 64.7 bits (158), Expect = 6e-13
 Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 16/95 (16%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGT--- 105
            L YL +  KH +I RD+K +NILL+E+ Q KL DFG   IS            AG    
Sbjct: 136 ALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFG---ISGRLVDDKAKDRSAGCAAY 190

Query: 106 --------AGFLNTELTEKSDVDSFEIVILEIITG 132
                         +   ++DV S  I ++E+ TG
Sbjct: 191 MAPERIDPPDPTKPDYDIRADVWSLGISLVELATG 225

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 63.9 bits (156), Expect = 1e-12
 Identities = 23/92 (25%), Positives = 35/92 (38%), Gaps = 11/92 (11%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
              L +LH      ++  D+K  NI L  + + KL DFG        G         G  
Sbjct: 167 LLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGLLV---ELGTAGAGEVQEGDP 220

Query: 107 GFLNTEL-----TEKSDVDSFEIVILEIITGI 133
            ++  EL        +DV S  + ILE+   +
Sbjct: 221 RYMAPELLQGSYGTAADVFSLGLTILEVACNM 252

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 63.5 bits (155), Expect = 1e-12
 Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 11/92 (11%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
           C  LE++H      ++ RD+K  N+ +      KL D G  R       T  + ++ GT 
Sbjct: 146 CSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRF--FSSKTTAAHSLVGTP 200

Query: 107 GFLNTEL------TEKSDVDSFEIVILEIITG 132
            +++ E         KSD+ S   ++ E+   
Sbjct: 201 YYMSPERIHENGYNFKSDIWSLGCLLYEMAAL 232

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 63.0 bits (154), Expect = 2e-12
 Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 15/94 (15%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGT--- 105
            LE+LH   K  +I RD+K +N+L+N   Q K+ DFG   IS            AG    
Sbjct: 121 ALEHLHS--KLSVIHRDVKPSNVLINALGQVKMCDFG---ISGYLVDDVAKDIDAGCKPY 175

Query: 106 -------AGFLNTELTEKSDVDSFEIVILEIITG 132
                          + KSD+ S  I ++E+   
Sbjct: 176 MAPERINPELNQKGYSVKSDIWSLGITMIELAIL 209

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 63.5 bits (155), Expect = 2e-12
 Identities = 31/94 (32%), Positives = 40/94 (42%), Gaps = 15/94 (15%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGT--- 105
            L +L + LK  II RD+K +NILL+     KL DFG   IS     +   T  AG    
Sbjct: 137 ALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFG---ISGQLVDSIAKTRDAGCRPY 191

Query: 106 -------AGFLNTELTEKSDVDSFEIVILEIITG 132
                            +SDV S  I + E+ TG
Sbjct: 192 MAPERIDPSASRQGYDVRSDVWSLGITLYELATG 225

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 61.9 bits (151), Expect = 6e-12
 Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 21/128 (16%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
             G+++ H      I+ RD+K  NIL++     K+ DFG ++       T  +  + GT 
Sbjct: 121 LDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVL-GTV 176

Query: 107 GFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKGEFDIISVEKAVEIAMASV 160
            + + E        E +D+ S  IV+ E++ G    +  F G       E AV IA+  +
Sbjct: 177 QYFSPEQAKGEATDECTDIYSIGIVLYEMLVG----EPPFNG-------ETAVSIAIKHI 225

Query: 161 SSKVNRRP 168
              V    
Sbjct: 226 QDSVPNVT 233

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 60.5 bits (147), Expect = 2e-11
 Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 13/94 (13%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEK-VQAKLADFGQS-RISPVEGGTHMST--TIAG 104
           GLEYLH      I+  D+K+ N+LL+    +A L DFG +  + P   G  + T   I G
Sbjct: 162 GLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 218

Query: 105 TAGF------LNTELTEKSDVDSFEIVILEIITG 132
           T         +      K D+ S   ++L ++ G
Sbjct: 219 TETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 59.8 bits (145), Expect = 4e-11
 Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 12/95 (12%)

Query: 44  EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA 103
           ++   GLE+LHQ     II RD+K  N+LL++    +++D G +           +   A
Sbjct: 297 QIVS-GLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYA 350

Query: 104 GTAGFLNTELTEKSD----VD--SFEIVILEIITG 132
           GT GF+  EL    +    VD  +  + + E+I  
Sbjct: 351 GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAA 385

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 59.2 bits (144), Expect = 4e-11
 Identities = 25/131 (19%), Positives = 50/131 (38%), Gaps = 32/131 (24%)

Query: 14  LVELIGKQKNNALELGFRGNPELVDQQGKEEVC------CPGLEYLHQGLKHPIIQRDMK 67
           L + I K++   L        +                   G++Y+H      +I RD+K
Sbjct: 107 LEQWIEKRRGEKL-------DK-------VLALELFEQITKGVDYIHS---KKLINRDLK 149

Query: 68  STNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTEL------TEKSDVDS 121
            +NI L +  Q K+ DFG   +          T   GT  +++ E        ++ D+ +
Sbjct: 150 PSNIFLVDTKQVKIGDFG---LVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYA 206

Query: 122 FEIVILEIITG 132
             +++ E++  
Sbjct: 207 LGLILAELLHV 217

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 59.2 bits (144), Expect = 5e-11
 Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 21/125 (16%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMST-TIAGT 105
           C  L + HQ   + II RD+K  NI+++     K+ DFG +R     G +   T  + GT
Sbjct: 126 CQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182

Query: 106 AGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKGEFDIISVEKAVEIAMAS 159
           A +L+ E      +  +SDV S   V+ E++TG    +  F G       +  V +A   
Sbjct: 183 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG----EPPFTG-------DSPVSVAYQH 231

Query: 160 VSSKV 164
           V    
Sbjct: 232 VREDP 236

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 59.2 bits (143), Expect = 6e-11
 Identities = 18/98 (18%), Positives = 35/98 (35%), Gaps = 18/98 (18%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            L+Y+H       + R +K+++IL++   +  L+    +  S +  G             
Sbjct: 140 ALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNL-SMISHGQRQRVVHDFPKYS 195

Query: 109 LNT------EL--------TEKSDVDSFEIVILEIITG 132
           +        E+          KSD+ S  I   E+  G
Sbjct: 196 VKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANG 233

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 59.1 bits (143), Expect = 7e-11
 Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 15/96 (15%)

Query: 44  EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA 103
           E+   GLE++H      ++ RD+K  NILL+E    +++D G +     +   H      
Sbjct: 300 EIIL-GLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFS-KKKPH---ASV 351

Query: 104 GTAGFLNTELTEKSD-----VD--SFEIVILEIITG 132
           GT G++  E+ +K        D  S   ++ +++ G
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 58.4 bits (142), Expect = 1e-10
 Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 25/123 (20%)

Query: 44  EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA 103
           E+    LEYLH      II RD+K  NILLNE +  ++ DFG +++   E     + +  
Sbjct: 138 EIVS-ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV 193

Query: 104 GTAGFLNTELTEKSD----VD--SFEIVILEIITG---------------ILTVDLSFKG 142
           GTA +++ EL  +       D  +   +I +++ G               I+ ++  F  
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE 253

Query: 143 EFD 145
           +F 
Sbjct: 254 KFF 256

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 57.7 bits (140), Expect = 1e-10
 Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 13/94 (13%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQS-RISPVEGGTHMS--TTIAGT 105
           GLEYLH   K+  I RD+K+ NILL E    ++ADFG S  ++     T      T  GT
Sbjct: 133 GLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 189

Query: 106 AGFLNTELTE-------KSDVDSFEIVILEIITG 132
             ++  E+ E       K+D+ SF I  +E+ TG
Sbjct: 190 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 223

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 56.9 bits (138), Expect = 3e-10
 Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 14/93 (15%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKV-QAKLADFGQSRISPVEGGTHMSTTIAGTAG 107
           GL+YLH    + I+ RD+K  N+L+N      K++DFG S+   + G    + T  GT  
Sbjct: 134 GLKYLHD---NQIVHRDIKGDNVLINTYSGVLKISDFGTSKR--LAGINPCTETFTGTLQ 188

Query: 108 F--------LNTELTEKSDVDSFEIVILEIITG 132
           +              + +D+ S    I+E+ TG
Sbjct: 189 YMAPEIIDKGPRGYGKAADIWSLGCTIIEMATG 221

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 56.6 bits (137), Expect = 4e-10
 Identities = 21/89 (23%), Positives = 31/89 (34%), Gaps = 19/89 (21%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA--- 103
           C GLE +H         RD+K TNILL ++ Q  L D G    + +              
Sbjct: 144 CRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDW 200

Query: 104 ----GTA---------GFLNTELTEKSDV 119
                T             +  + E++DV
Sbjct: 201 AAQRCTISYRAPELFSVQSHCVIDERTDV 229

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 56.7 bits (137), Expect = 5e-10
 Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 13/95 (13%)

Query: 44  EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA 103
           E+CC GLE LH   +  I+ RD+K  NILL++    +++D G +   P            
Sbjct: 294 EICC-GLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIK---GRV 346

Query: 104 GTAGFLNTELTEKSD----VD--SFEIVILEIITG 132
           GT G++  E+ +        D  +   ++ E+I G
Sbjct: 347 GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAG 381

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 56.3 bits (136), Expect = 7e-10
 Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 11/97 (11%)

Query: 44  EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA 103
           E+    L+YLH   +  ++ RD+K  N++L++    K+ DFG  +    +G T    T  
Sbjct: 256 EIVS-ALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKTFC 310

Query: 104 GTAGFLNTELTEKSD----VD--SFEIVILEIITGIL 134
           GT  +L  E+ E +D    VD     +V+ E++ G L
Sbjct: 311 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 347

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 56.0 bits (135), Expect = 8e-10
 Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 19/93 (20%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT--IAG 104
            P L YLH      ++  D+K  NI+L E+ Q KL D G            +++   + G
Sbjct: 192 LPALSYLHS---IGLVYNDLKPENIMLTEE-QLKLIDLGAVS--------RINSFGYLYG 239

Query: 105 TAGFL-----NTELTEKSDVDSFEIVILEIITG 132
           T GF       T  T  +D+ +    +  +   
Sbjct: 240 TPGFQAPEIVRTGPTVATDIYTVGRTLAALTLD 272

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 55.8 bits (134), Expect = 1e-09
 Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 12/95 (12%)

Query: 44  EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA 103
           E+   GL +L       II RD+K  N++L+ +   K+ADFG  + +  +G T  + T  
Sbjct: 450 EIAI-GLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKTFC 503

Query: 104 GTAGFLNTELTEKSD----VD--SFEIVILEIITG 132
           GT  ++  E+         VD  +F +++ E++ G
Sbjct: 504 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAG 538

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 55.4 bits (134), Expect = 1e-09
 Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 23/96 (23%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL+YLH       I RD+K+ N+LL+E  + KLADFG +          ++ T      F
Sbjct: 131 GLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVA--------GQLTDTQIKRNTF 179

Query: 109 LNT------------ELTEKSDVDSFEIVILEIITG 132
           + T                K+D+ S  I  +E+  G
Sbjct: 180 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARG 215

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 55.4 bits (134), Expect = 1e-09
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 3/42 (7%)

Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQS 87
               L +LH      II RD+K+ N+L+  +   +LADFG S
Sbjct: 126 MLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADFGVS 164

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 55.0 bits (133), Expect = 1e-09
 Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 3/40 (7%)

Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFG 85
           C   LE+LH    + +I RD+KS NILL      KL DFG
Sbjct: 125 CLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFG 161

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 55.3 bits (134), Expect = 1e-09
 Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 10/92 (10%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
              L+  H         RD+K  NIL++    A L DFG +  +  E  T +  T+ GT 
Sbjct: 144 GSALDAAHA---AGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV-GTL 199

Query: 107 GFL------NTELTEKSDVDSFEIVILEIITG 132
            ++       +  T ++D+ +   V+ E +TG
Sbjct: 200 YYMAPERFSESHATYRADIYALTCVLYECLTG 231

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 55.1 bits (133), Expect = 1e-09
 Identities = 22/40 (55%), Positives = 25/40 (62%), Gaps = 3/40 (7%)

Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFG 85
              GLEYLH       I RD+K+ NILLN +  AKLADFG
Sbjct: 134 TLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFG 170

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 55.3 bits (134), Expect = 1e-09
 Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 13/93 (13%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAG-- 104
             G+EYL        I RD+ + N L+ EK   K++DFG SR      G + ++      
Sbjct: 223 AAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSRE--EADGVYAASGGLRQV 277

Query: 105 ----TA--GFLNTELTEKSDVDSFEIVILEIIT 131
               TA         + +SDV SF I++ E  +
Sbjct: 278 PVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 55.1 bits (133), Expect = 1e-09
 Identities = 29/98 (29%), Positives = 40/98 (40%), Gaps = 22/98 (22%)

Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMS--TTIA 103
              GL YLH    H +I RD+K+ NILL+E    KL DFG +        + M+   +  
Sbjct: 163 ALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSA--------SIMAPANSFV 211

Query: 104 GT---------AGFLNTELTEKSDVDSFEIVILEIITG 132
           GT               +   K DV S  I  +E+   
Sbjct: 212 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER 249

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 54.9 bits (133), Expect = 1e-09
 Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 12/95 (12%)

Query: 44  EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA 103
           E+    LEYLH      ++ RD+K  N++L++    K+ DFG  +    +G T    T  
Sbjct: 113 EIVS-ALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKTFC 166

Query: 104 GTAGFLNTELTEKSD----VD--SFEIVILEIITG 132
           GT  +L  E+ E +D    VD     +V+ E++ G
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 55.1 bits (133), Expect = 1e-09
 Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 3/39 (7%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQS 87
           GL +LH   +H +I RD+K  N+LL E  + KL DFG S
Sbjct: 141 GLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVS 176

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 54.7 bits (132), Expect = 2e-09
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 3/40 (7%)

Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFG 85
               L YLH      +I RD+KS +ILL    + KL+DFG
Sbjct: 150 VLQALAYLH---AQGVIHRDIKSDSILLTLDGRVKLSDFG 186

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 54.8 bits (132), Expect = 2e-09
 Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 12/92 (13%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT----- 101
              +EYL +      I R++ + N L+ E    K+ADFG SR+  + G T+ +       
Sbjct: 328 SSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFP 382

Query: 102 IAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
           I  TA       + + KSDV +F +++ EI T
Sbjct: 383 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 54.6 bits (132), Expect = 2e-09
 Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 16/98 (16%)

Query: 44  EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA 103
           E+    L+YL       II RDMK  NILL+E     + DF  + + P E      TT+A
Sbjct: 123 ELVM-ALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQI---TTMA 175

Query: 104 GTAGFLNTELTEKSD-------VD--SFEIVILEIITG 132
           GT  ++  E+            VD  S  +   E++ G
Sbjct: 176 GTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRG 213

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 53.8 bits (130), Expect = 3e-09
 Identities = 25/126 (19%), Positives = 47/126 (37%), Gaps = 31/126 (24%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILL---NEKVQAKLADFGQSRISPVEGGTHMSTTIAGT 105
            L Y H      ++ +D+K  NIL    +     K+ DFG + +   +   H  T  AGT
Sbjct: 136 ALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAEL--FKSDEHS-TNAAGT 189

Query: 106 AGF-----LNTELTEKSDVDSFEIVIL----------------EIITGILTVDLSFKGEF 144
           A +        ++T K D+ S   V++                E+       + ++  E 
Sbjct: 190 ALYMAPEVFKRDVTFKCDIWSAG-VVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVEC 248

Query: 145 DIISVE 150
             ++ +
Sbjct: 249 RPLTPQ 254

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 53.8 bits (130), Expect = 3e-09
 Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 6/61 (9%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            +  LH   K  I+ RD+K  NILL++ +  KL DFG S    ++ G  +   + GT  +
Sbjct: 136 VICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ--LDPGEKL-REVCGTPSY 189

Query: 109 L 109
           L
Sbjct: 190 L 190

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 54.0 bits (130), Expect = 4e-09
 Identities = 28/129 (21%), Positives = 48/129 (37%), Gaps = 32/129 (24%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQA--KLADFGQSRISPVEGGTHMSTTIAG 104
           C GL+++H+   H I+  D+K  NI+   K  +  K+ DFG +    +     +      
Sbjct: 159 CEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATK--LNPDEIV-KVTTA 212

Query: 105 TAGFLNTELTEKSDVDSFEI------VIL----------------EIITGILTVDLSFKG 142
           TA F   E+ ++  V  F        V+                 E +  +   D  F  
Sbjct: 213 TAEFAAPEIVDREPV-GFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDE 271

Query: 143 E-FDIISVE 150
           + F  +S E
Sbjct: 272 DAFSSVSPE 280

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 53.6 bits (129), Expect = 5e-09
 Identities = 23/99 (23%), Positives = 42/99 (42%), Gaps = 18/99 (18%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEK-----VQAKLADFGQSR-ISPVEGGTHMSTTI 102
           GL +LH      I+ RD+K  NIL++       ++A ++DFG  + ++         + +
Sbjct: 130 GLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGV 186

Query: 103 AGTAGFL---------NTELTEKSDVDSFEIVILEIITG 132
            GT G++             T   D+ S   V   +I+ 
Sbjct: 187 PGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISE 225

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 53.6 bits (129), Expect = 6e-09
 Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 12/92 (13%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT----- 101
             G+ Y+    +   + RD+++ NIL+ E +  K+ADFG +R+  +E   + +       
Sbjct: 290 ASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFP 344

Query: 102 IAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
           I  TA    L    T KSDV SF I++ E+ T
Sbjct: 345 IKWTAPEAALYGRFTIKSDVWSFGILLTELTT 376

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 53.3 bits (128), Expect = 6e-09
 Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 12/92 (13%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT----- 101
             G+ Y+    +   + RD+++ NIL+ E +  K+ADFG +R+  +E   + +       
Sbjct: 373 ASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARL--IEDNEYTARQGAKFP 427

Query: 102 IAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
           I  TA    L    T KSDV SF I++ E+ T
Sbjct: 428 IKWTAPEAALYGRFTIKSDVWSFGILLTELTT 459

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 53.2 bits (128), Expect = 7e-09
 Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 6/61 (9%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            + +LH    + I+ RD+K  NILL++ +Q +L+DFG S    +E G  +   + GT G+
Sbjct: 212 AVSFLHA---NNIVHRDLKPENILLDDNMQIRLSDFGFSCH--LEPGEKL-RELCGTPGY 265

Query: 109 L 109
           L
Sbjct: 266 L 266

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 53.0 bits (128), Expect = 8e-09
 Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 12/95 (12%)

Query: 44  EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA 103
           E+    L +LH      II RD+K  N+LL+ +   KLADFG  +     G T  + T  
Sbjct: 132 EIIS-ALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT--TATFC 185

Query: 104 GTAGFLNTELTEKSD----VD--SFEIVILEIITG 132
           GT  ++  E+ ++      VD  +  +++ E++ G
Sbjct: 186 GTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 52.5 bits (127), Expect = 9e-09
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 5/51 (9%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI--SPVEGGTH 97
           GL + H      ++ RD+K  N+L+N   + KLA+FG +R    PV   + 
Sbjct: 113 GLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSA 160

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 52.6 bits (127), Expect = 9e-09
 Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 12/95 (12%)

Query: 44  EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA 103
           E+   GL +L       II RD+K  N++L+ +   K+ADFG  + +  +G T  + T  
Sbjct: 129 EIAI-GLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKTFC 182

Query: 104 GTAGFLNTELTEKSD----VD--SFEIVILEIITG 132
           GT  ++  E+         VD  +F +++ E++ G
Sbjct: 183 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAG 217

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 52.5 bits (127), Expect = 9e-09
 Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 12/95 (12%)

Query: 44  EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA 103
           E+    L +LH   +  II RD+K  NI+LN +   KL DFG  + S  +G    + T  
Sbjct: 129 EISM-ALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTV--THTFC 182

Query: 104 GTAGFLNTELTEKSD----VD--SFEIVILEIITG 132
           GT  ++  E+  +S     VD  S   ++ +++TG
Sbjct: 183 GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 52.6 bits (127), Expect = 1e-08
 Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 5/51 (9%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI--SPVEGGTH 97
           G+ + HQ   H I+ RD+K  N+L+N     KLADFG +R    PV   TH
Sbjct: 131 GVAHCHQ---HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTH 178

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 52.8 bits (127), Expect = 1e-08
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 4/57 (7%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGT 105
            +  +HQ   H I+  D+K  N L+ + +  KL DFG +     +  + +  +  GT
Sbjct: 120 AVHTIHQ---HGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGT 172

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 52.5 bits (127), Expect = 1e-08
 Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 5/53 (9%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI--SPVEGGTH 97
             GL + H    H ++ RD+K  N+L+N +   KLADFG +R    PV   TH
Sbjct: 113 LQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 162

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 52.3 bits (126), Expect = 1e-08
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 4/57 (7%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGT 105
            +  +HQ   H I+  D+K  N L+ + +  KL DFG +     +  + +  +  GT
Sbjct: 139 AVHTIHQ---HGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGT 191

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 52.9 bits (127), Expect = 1e-08
 Identities = 27/129 (20%), Positives = 46/129 (35%), Gaps = 32/129 (24%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQA--KLADFGQSRISPVEGGTHMSTTIAG 104
           C GL ++H+   +  +  D+K  NI+   K     KL DFG +    ++    +     G
Sbjct: 265 CKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAH--LDPKQSV-KVTTG 318

Query: 105 TAGFLNTELTEKSDVDSFEI------VIL----------------EIITGILTVDLSFKG 142
           TA F   E+ E   V  +        V+                 E +  + + D +   
Sbjct: 319 TAEFAAPEVAEGKPV-GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDD 377

Query: 143 E-FDIISVE 150
             F  IS +
Sbjct: 378 SAFSGISED 386

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 52.5 bits (126), Expect = 1e-08
 Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 1/43 (2%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI 89
           C  ++++H+  K PII RD+K  N+LL+ +   KL DFG +  
Sbjct: 146 CRAVQHMHR-QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATT 187

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 52.2 bits (126), Expect = 1e-08
 Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 12/95 (12%)

Query: 44  EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA 103
           E+    L++LH      II RD+K  NILL+E+   KL DFG S+ S        + +  
Sbjct: 134 ELAL-ALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK--AYSFC 187

Query: 104 GTAGFLNTELTEKSD----VD--SFEIVILEIITG 132
           GT  ++  E+  +       D  SF +++ E++TG
Sbjct: 188 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 52.2 bits (126), Expect = 1e-08
 Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 12/95 (12%)

Query: 44  EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA 103
           E+   GL++LH      I+ RD+K  NILL++    K+ADFG  + + +      + T  
Sbjct: 126 EIIL-GLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNTFC 179

Query: 104 GTAGFLNTELTEKSD----VD--SFEIVILEIITG 132
           GT  ++  E+         VD  SF +++ E++ G
Sbjct: 180 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIG 214

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 52.2 bits (126), Expect = 1e-08
 Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 5/51 (9%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI--SPVEGGTH 97
           GLEYLHQ   H I+ RD+K  N+LL+E    KLADFG ++   SP    TH
Sbjct: 124 GLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTH 171

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 52.1 bits (126), Expect = 1e-08
 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 5/51 (9%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI--SPVEGGTH 97
           G+ Y H      ++ RD+K  N+L+N + + K+ADFG +R    PV   TH
Sbjct: 112 GIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH 159

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 52.0 bits (125), Expect = 1e-08
 Identities = 20/101 (19%), Positives = 37/101 (36%), Gaps = 19/101 (18%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI----------SPVEGGT 96
              +E+LH      ++ RD+K +NI        K+ DFG                     
Sbjct: 128 AEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAY 184

Query: 97  HMSTTIAGTAGFLNTEL------TEKSDVDSFEIVILEIIT 131
              T   GT  +++ E       + K D+ S  +++ E++ 
Sbjct: 185 ARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY 225

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 52.2 bits (126), Expect = 1e-08
 Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 3/40 (7%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR 88
           GL Y+H   ++ I+ RDMK+ N+L+      KLADFG +R
Sbjct: 136 GLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLAR 172

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 51.8 bits (125), Expect = 2e-08
 Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 5/51 (9%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI--SPVEGGTH 97
           GL + H+   + I+ RD+K  N+L+N++ Q KL DFG +R    PV   + 
Sbjct: 120 GLAFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSS 167

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 52.1 bits (125), Expect = 2e-08
 Identities = 21/101 (20%), Positives = 40/101 (39%), Gaps = 21/101 (20%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGT--- 105
            +  +HQ   H I+  D+K  N L+ + +  KL DFG +     +  + +  +  G    
Sbjct: 167 AVHTIHQ---HGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGAVNY 222

Query: 106 --------------AGFLNTELTEKSDVDSFEIVILEIITG 132
                          G   ++++ KSDV S   ++  +  G
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG 263

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 51.8 bits (125), Expect = 2e-08
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 5/51 (9%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI--SPVEGGTH 97
            + + H   KH  I RD+K  NIL+ +    KL DFG +R+   P +    
Sbjct: 114 AVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDD 161

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 52.0 bits (125), Expect = 2e-08
 Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 12/92 (13%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT----- 101
             G+ ++ Q      I RD+++ NIL++  +  K+ADFG +R+  +E   + +       
Sbjct: 294 AEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARV--IEDNEYTAREGAKFP 348

Query: 102 IAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
           I  TA         T KSDV SF I+++EI+T
Sbjct: 349 IKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 380

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 51.8 bits (125), Expect = 2e-08
 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 5/51 (9%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI--SPVEGGTH 97
           G+ + H    H II RD+K  NIL+++    KL DFG +R   +P E    
Sbjct: 136 GIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDD 183

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 51.8 bits (125), Expect = 2e-08
 Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 3/42 (7%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR 88
             GL++LH    + I+ RD+K  NIL+      KLADFG +R
Sbjct: 130 LRGLDFLHA---NCIVHRDLKPENILVTSGGTVKLADFGLAR 168

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 51.8 bits (125), Expect = 2e-08
 Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 12/95 (12%)

Query: 44  EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA 103
           E+    L YLH+     II RD+K  N+LL+ +   KL D+G  +     G T  ++T  
Sbjct: 118 EISL-ALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSTFC 171

Query: 104 GTAGFLNTELTEKSD----VD--SFEIVILEIITG 132
           GT  ++  E+    D    VD  +  +++ E++ G
Sbjct: 172 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 206

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 51.8 bits (124), Expect = 2e-08
 Identities = 24/106 (22%), Positives = 42/106 (39%), Gaps = 21/106 (19%)

Query: 47  CPGLEYLH-QGLKHPIIQRDMKSTNILLNEKVQAKLADFG----------QSRISPVEGG 95
              +E+LH +GL H    RD+K +NI        K+ DFG          +  +      
Sbjct: 174 AEAVEFLHSKGLMH----RDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 229

Query: 96  THMSTTIAGTAGFLNTEL------TEKSDVDSFEIVILEIITGILT 135
               T   GT  +++ E       + K D+ S  +++ E++    T
Sbjct: 230 YATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFST 275

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 51.9 bits (125), Expect = 2e-08
 Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 12/95 (12%)

Query: 44  EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA 103
           E+    L YLH      I+ RD+K  NILL+ +    L DFG  + +     T  ++T  
Sbjct: 147 EIAS-ALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNST--TSTFC 200

Query: 104 GTAGFLNTELTEKSD----VD--SFEIVILEIITG 132
           GT  +L  E+  K      VD      V+ E++ G
Sbjct: 201 GTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 51.8 bits (125), Expect = 2e-08
 Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 5/51 (9%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI--SPVEGGTH 97
           GL Y H+     ++ RD+K  N+L+NE+ + KLADFG +R    P +   +
Sbjct: 112 GLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDN 159

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 51.8 bits (125), Expect = 2e-08
 Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 3/42 (7%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR 88
             GL++LH    H ++ RD+K  NIL+    Q KLADFG +R
Sbjct: 130 LRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLAR 168

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 51.5 bits (124), Expect = 2e-08
 Identities = 27/129 (20%), Positives = 51/129 (39%), Gaps = 32/129 (24%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQA--KLADFGQSRISPVEGGTHMSTTIAG 104
           C  L++LH    H I   D++  NI+   +  +  K+ +FGQ+R   ++ G +    +  
Sbjct: 112 CEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQ--LKPGDNF-RLLFT 165

Query: 105 TAGFLNTELTEKSDVDSFEI------VIL----------------EIITGILTVDLSFKG 142
              +   E+ +   V S          ++                +II  I+  + +F  
Sbjct: 166 APEYYAPEVHQHDVV-STATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDE 224

Query: 143 E-FDIISVE 150
           E F  IS+E
Sbjct: 225 EAFKEISIE 233

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 51.5 bits (124), Expect = 3e-08
 Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 9/91 (9%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT----I 102
             G+ YL       ++ RD+ + N+L+      K+ DFG +++   E   + +      I
Sbjct: 127 AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183

Query: 103 AGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
              A    L+   T +SDV S+ + + E++T
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMT 214

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 51.2 bits (123), Expect = 3e-08
 Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 12/95 (12%)

Query: 44  EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA 103
           E+    L YLH+     II RD+K  N+LL+ +   KL D+G  +     G T  ++T  
Sbjct: 161 EISL-ALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSTFC 214

Query: 104 GTAGFLNTELTEKSD----VD--SFEIVILEIITG 132
           GT  ++  E+    D    VD  +  +++ E++ G
Sbjct: 215 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 249

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 50.9 bits (122), Expect = 4e-08
 Identities = 33/129 (25%), Positives = 46/129 (35%), Gaps = 32/129 (24%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQA--KLADFGQSRISPVEGGTHMSTTIAG 104
           C G+ ++HQ     I+  D+K  NIL   +     K+ DFG +R    +    +     G
Sbjct: 197 CEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARR--YKPREKL-KVNFG 250

Query: 105 TAGFLNTELTEKSDVDSFEI------VIL----------------EIITGILTVDLSFKG 142
           T  FL  E+     V SF        VI                 E +  IL      + 
Sbjct: 251 TPEFLAPEVVNYDFV-SFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLED 309

Query: 143 E-FDIISVE 150
           E F  IS E
Sbjct: 310 EEFQDISEE 318

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 50.8 bits (122), Expect = 4e-08
 Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 9/66 (13%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEK---VQAKLADFGQSRISPVEGGTHMSTTIA 103
              ++YLH   ++ II RD+K  N+LL+ +      K+ DFG S+I  +   + M  T+ 
Sbjct: 249 LLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLM-RTLC 302

Query: 104 GTAGFL 109
           GT  +L
Sbjct: 303 GTPTYL 308

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 50.3 bits (121), Expect = 5e-08
 Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 5/57 (8%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGT 105
           G +YLH+   + +I RD+K  N+ LNE ++ K+ DFG +  + VE        + GT
Sbjct: 127 GCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLA--TKVEYDGERKKVLCGT 178

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 50.4 bits (121), Expect = 5e-08
 Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 13/97 (13%)

Query: 44  EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA 103
           E+    LE+LH   K  II RD+K  NILL+      L DFG S+   V   T  +    
Sbjct: 167 EIVL-ALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF-VADETERAYDFC 221

Query: 104 GTAGFLNTELTEKSD------VD--SFEIVILEIITG 132
           GT  ++  ++    D      VD  S  +++ E++TG
Sbjct: 222 GTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 50.3 bits (120), Expect = 7e-08
 Identities = 20/92 (21%), Positives = 46/92 (50%), Gaps = 10/92 (10%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT----- 101
             G++YL +  K+  + R++ + N+LL  +  AK++DFG S+    +   + + +     
Sbjct: 446 SMGMKYLEE--KN-FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWP 502

Query: 102 IAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
           +   A       + + +SDV S+ + + E ++
Sbjct: 503 LKWYAPECINFRKFSSRSDVWSYGVTMWEALS 534

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 50.0 bits (120), Expect = 7e-08
 Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 10/92 (10%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT----- 101
           C G+EYL    +   + RD+ + NIL+  +   K+ADFG +++ P++   ++        
Sbjct: 137 CKGMEYLGS--RR-CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP 193

Query: 102 IAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
           I   A     +   + +SDV SF +V+ E+ T
Sbjct: 194 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 49.8 bits (120), Expect = 7e-08
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 5/57 (8%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGT 105
           G+ YLH    H I+ RD+  +N+LL   +  K+ADFG +    +    H   T+ GT
Sbjct: 124 GMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHY--TLCGT 175

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 50.0 bits (120), Expect = 7e-08
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 5/65 (7%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI--SPVEGGTHMSTTIAGTA 106
            L Y+H      II RD+K  NI ++E    K+ DFG ++     ++     S  + G++
Sbjct: 128 ALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184

Query: 107 GFLNT 111
             L +
Sbjct: 185 DNLTS 189

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 50.0 bits (120), Expect = 8e-08
 Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 5/57 (8%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGT 105
           G+EYLH      II RD+K +N+L+ E    K+ADFG S     +G   + +   GT
Sbjct: 149 GIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEF--KGSDALLSNTVGT 200

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 49.9 bits (120), Expect = 8e-08
 Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 13/92 (14%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            L Y H      +I RD+K  N+LL    + K+ADFG S  +P    +   T + GT  +
Sbjct: 121 ALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTDLCGTLDY 173

Query: 109 LNTEL------TEKSDVDSFEIVILEIITGIL 134
           L  E+       EK D+ S  ++  E + G  
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 205

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 49.9 bits (120), Expect = 8e-08
 Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 12/92 (13%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAG-- 104
              +EYL +      I RD+ + N L+ E    K+ADFG SR+  + G T+ +   A   
Sbjct: 121 SSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRL--MTGDTYTAHAGAKFP 175

Query: 105 ---TA--GFLNTELTEKSDVDSFEIVILEIIT 131
              TA       + + KSDV +F +++ EI T
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 50.0 bits (120), Expect = 9e-08
 Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 5/57 (8%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGT 105
           G +YLH+   + +I RD+K  N+ LNE ++ K+ DFG +  + VE        + GT
Sbjct: 153 GCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLA--TKVEYDGERKKVLCGT 204

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 49.6 bits (119), Expect = 1e-07
 Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 9/91 (9%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT----I 102
             G+ YL       ++ RD+ + N+L+      K+ DFG +++   E   + +      I
Sbjct: 127 AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183

Query: 103 AGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
              A    L+   T +SDV S+ + + E++T
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMT 214

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 49.7 bits (119), Expect = 1e-07
 Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 20/94 (21%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAG-- 104
           C  +EYL     +  + RD+ + N+L++E   AK++DFG ++          S+T     
Sbjct: 299 CEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTK--------EASSTQDTGK 347

Query: 105 -----TA--GFLNTELTEKSDVDSFEIVILEIIT 131
                TA       + + KSDV SF I++ EI +
Sbjct: 348 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 381

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 49.6 bits (119), Expect = 1e-07
 Identities = 22/92 (23%), Positives = 34/92 (36%), Gaps = 10/92 (10%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT----- 101
             G+ YL        I RD+ + N+LL  +   K+ DFG  R  P     ++        
Sbjct: 131 AEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP 187

Query: 102 IAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
            A  A         +  SD   F + + E+ T
Sbjct: 188 FAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 49.6 bits (119), Expect = 1e-07
 Identities = 21/92 (22%), Positives = 43/92 (46%), Gaps = 10/92 (10%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT----- 101
           C G++YL    +   + RD+ + N+L+  + Q K+ DFG ++    +   +         
Sbjct: 136 CKGMDYLGS--RQ-YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSP 192

Query: 102 IAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
           +   A    + ++    SDV SF + + E++T
Sbjct: 193 VFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 49.2 bits (118), Expect = 1e-07
 Identities = 33/129 (25%), Positives = 51/129 (39%), Gaps = 35/129 (27%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILL---NEKVQAKLADFGQSRISPVEGGTHMSTTIA 103
             G+ YLHQ   + I+  D+K  NILL         K+ DFG SR   +     +   I 
Sbjct: 141 LEGVYYLHQ---NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRK--IGHACEL-REIM 194

Query: 104 GTAGF-----LNTE-LTEKSDVDSFEI-VIL----------------EIITGILTVDLSF 140
           GT  +     LN + +T  +D+ +  I +I                 E    I  V++ +
Sbjct: 195 GTPEYLAPEILNYDPITTATDMWN--IGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDY 252

Query: 141 KGE-FDIIS 148
             E F  +S
Sbjct: 253 SEETFSSVS 261

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 49.2 bits (118), Expect = 1e-07
 Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 9/91 (9%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT----I 102
             G+ YL +   H ++ R++ + N+LL    Q ++ADFG + + P +    + +     I
Sbjct: 125 AKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPI 181

Query: 103 AGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
              A       + T +SDV S+ + + E++T
Sbjct: 182 KWMALESIHFGKYTHQSDVWSYGVTVWELMT 212

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 49.2 bits (118), Expect = 1e-07
 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 10/92 (10%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT----- 101
           C G+EYL    K   I RD+ + NIL+  + + K+ DFG +++ P +             
Sbjct: 124 CKGMEYLGT--KR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESP 180

Query: 102 IAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
           I   A      ++ +  SDV SF +V+ E+ T
Sbjct: 181 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 212

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 49.1 bits (117), Expect = 2e-07
 Identities = 32/130 (24%), Positives = 51/130 (39%), Gaps = 31/130 (23%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQA--KLADFGQSRI--SPVEGGTHMSTTIAG 104
            L YLH      I  RD+K  N L +       KL DFG S+       G  +  TT AG
Sbjct: 180 ALHYLHN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAG 236

Query: 105 TAGFLNTELTEKSD------VDSFEI-VIL----------------EIITGILTVDLSFK 141
           T  F+  E+   ++       D++   V+L                + I+ +L   L F+
Sbjct: 237 TPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFE 296

Query: 142 G-EFDIISVE 150
              ++++S  
Sbjct: 297 NPNYNVLSPL 306

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 49.2 bits (118), Expect = 2e-07
 Identities = 33/131 (25%), Positives = 44/131 (33%), Gaps = 34/131 (25%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEK----VQAKLADFGQSRISPVEGGTHMSTTI 102
             G+ YLH      I   D+K  NI+L +K       KL DFG +    +E G      I
Sbjct: 125 LDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE--IEDGVEF-KNI 178

Query: 103 AGTAGFLNTELTEKSDVDSFEI------VIL----------------EIITGILTVDLSF 140
            GT  F+  E+     +   E       VI                 E +  I +V   F
Sbjct: 179 FGTPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDF 237

Query: 141 KGE-FDIISVE 150
             E F   S  
Sbjct: 238 DEEFFSHTSEL 248

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 48.7 bits (117), Expect = 2e-07
 Identities = 34/129 (26%), Positives = 45/129 (34%), Gaps = 34/129 (26%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQA----KLADFGQSRISPVEGGTHMSTTI 102
             G+ YLH      I   D+K  NI+L +K       KL DFG +    +E G      I
Sbjct: 118 LDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK--IEAGNEF-KNI 171

Query: 103 AGTAGFLNTELTEKSDVDSFEI------VIL----------------EIITGILTVDLSF 140
            GT  F+  E+     +   E       VI                 E +T I  V+  F
Sbjct: 172 FGTPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDF 230

Query: 141 KGE-FDIIS 148
             E F   S
Sbjct: 231 DEEYFSNTS 239

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 48.9 bits (117), Expect = 2e-07
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 10/92 (10%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT----- 101
           C G+EYL    K   I RD+ + NIL+  + + K+ DFG +++ P +   +         
Sbjct: 155 CKGMEYLGT--KR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESP 211

Query: 102 IAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
           I   A      ++ +  SDV SF +V+ E+ T
Sbjct: 212 IFWYAPESLTESKFSVASDVWSFGVVLYELFT 243

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 48.8 bits (117), Expect = 2e-07
 Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 15/95 (15%)

Query: 44  EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA 103
           ++     EYLH      +I RD+K  N+L++++   ++ DFG ++   V+G T    T+ 
Sbjct: 149 QIVL-TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--VKGRTW---TLC 199

Query: 104 GTAGFLNTELTEKSD----VD--SFEIVILEIITG 132
           GT   L  E+         VD  +  ++I E+  G
Sbjct: 200 GTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 48.9 bits (116), Expect = 2e-07
 Identities = 6/92 (6%), Positives = 16/92 (17%), Gaps = 16/92 (17%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
               L       ++       N+ +    +  L D                   +    +
Sbjct: 206 LAANLQ---SKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVG-----TRGPASSVPVTY 257

Query: 109 L--------NTELTEKSDVDSFEIVILEIITG 132
                        T   +     + I  +   
Sbjct: 258 APREFLNASTATFTHALNAWQLGLSIYRVWCL 289

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 48.8 bits (117), Expect = 2e-07
 Identities = 29/131 (22%), Positives = 45/131 (34%), Gaps = 34/131 (25%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQA----KLADFGQSRISPVEGGTHMSTTI 102
             G+ YLH      I   D+K  NI+L ++       K+ DFG +    ++ G      I
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--IDFGNEF-KNI 177

Query: 103 AGTAGFLNTELTEKSDVDSFEI------VIL----------------EIITGILTVDLSF 140
            GT  F+  E+     +   E       VI                 E +  +  V+  F
Sbjct: 178 FGTPEFVAPEIVNYEPLG-LEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEF 236

Query: 141 KGE-FDIISVE 150
           + E F   S  
Sbjct: 237 EDEYFSNTSAL 247

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 48.4 bits (116), Expect = 2e-07
 Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 9/62 (14%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILL---NEKVQAKLADFGQSRISPVEGGTHMSTTIAGT 105
            ++YLH   ++ II RD+K  N+LL    E    K+ DFG S+I  +   + M  T+ GT
Sbjct: 126 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLM-RTLCGT 179

Query: 106 AG 107
             
Sbjct: 180 PT 181

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 48.6 bits (116), Expect = 2e-07
 Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 9/56 (16%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILL----NEKVQAKLADFGQSRI--SPVEGGTHM 98
           G+ YLH    + ++ RD+K  NIL+     E+ + K+AD G +R+  SP++    +
Sbjct: 140 GIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADL 192

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 48.4 bits (116), Expect = 2e-07
 Identities = 21/92 (22%), Positives = 46/92 (50%), Gaps = 10/92 (10%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT----- 101
             G++YL +  K+  + RD+ + N+LL  +  AK++DFG S+    +   + + +     
Sbjct: 120 SMGMKYLEE--KN-FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWP 176

Query: 102 IAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
           +   A       + + +SDV S+ + + E ++
Sbjct: 177 LKWYAPECINFRKFSSRSDVWSYGVTMWEALS 208

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 48.7 bits (116), Expect = 2e-07
 Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 12/92 (13%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT----- 101
              L YL        + RD+ + N+L++     KL DFG SR   +E  T+   +     
Sbjct: 501 STALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLP 555

Query: 102 IAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
           I   A         T  SDV  F + + EI+ 
Sbjct: 556 IKWMAPESINFRRFTSASDVWMFGVCMWEILM 587

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 48.4 bits (116), Expect = 2e-07
 Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 10/92 (10%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT----- 101
             G++YL +   +  + RD+ + N+LL  +  AK++DFG S+    +   + + T     
Sbjct: 127 SMGMKYLEE--SN-FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 183

Query: 102 IAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
           +   A       + + KSDV SF +++ E  +
Sbjct: 184 VKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 48.6 bits (116), Expect = 3e-07
 Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 16/100 (16%)

Query: 44  EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA 103
           E+    ++ +H   +   + RD+K  NIL++     +LADFG      +E GT  S+   
Sbjct: 183 EMVI-AIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKL-MEDGTVQSSVAV 237

Query: 104 GTAGFLNTE-LTEKSD--------VD--SFEIVILEIITG 132
           GT  +++ E L              D  S  + + E++ G
Sbjct: 238 GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYG 277

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 48.5 bits (116), Expect = 3e-07
 Identities = 33/131 (25%), Positives = 43/131 (32%), Gaps = 34/131 (25%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQA----KLADFGQSRISPVEGGTHMSTTI 102
             G+ YLH      I   D+K  NI+L +K       KL DFG +    +E G      I
Sbjct: 125 LDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE--IEDGVEF-KNI 178

Query: 103 AGTAGFLNTELTEKSDVDSFEI------VIL----------------EIITGILTVDLSF 140
            GT  F+  E+     +   E       VI                 E +  I  V   F
Sbjct: 179 FGTPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDF 237

Query: 141 KGE-FDIISVE 150
             E F   S  
Sbjct: 238 DEEFFSQTSEL 248

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 48.5 bits (116), Expect = 3e-07
 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 8/64 (12%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQA---KLADFGQSRISPVEGGTHMSTTIAGT 105
            + + HQ     ++ R++K  N+LL  K++    KLADFG +    VEG        AGT
Sbjct: 122 AVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIE--VEGEQQAWFGFAGT 176

Query: 106 AGFL 109
            G+L
Sbjct: 177 PGYL 180

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 47.9 bits (115), Expect = 4e-07
 Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 15/95 (15%)

Query: 44  EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA 103
           EVC   LEYLH      II RD+K  NILL++    K+ DFG ++   V   T+   T+ 
Sbjct: 114 EVCL-ALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKY--VPDVTY---TLC 164

Query: 104 GTAGFLNTELTEKSD----VD--SFEIVILEIITG 132
           GT  ++  E+         +D  SF I+I E++ G
Sbjct: 165 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 48.0 bits (115), Expect = 4e-07
 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 13/92 (14%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            L Y H   +  +I RD+K  N+L+  K + K+ADFG S  +P    +    T+ GT  +
Sbjct: 126 ALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP----SLRRRTMCGTLDY 178

Query: 109 LNTEL------TEKSDVDSFEIVILEIITGIL 134
           L  E+       EK D+    ++  E + G+ 
Sbjct: 179 LPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMP 210

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 48.1 bits (114), Expect = 4e-07
 Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 15/95 (15%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILL---NEKVQAKLADFGQSRISPVEGGTHMSTTIAGT 105
            L YLH+   + II RD+K  NI+L    +++  K+ D G ++         + T   GT
Sbjct: 133 ALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD---QGELCTEFVGT 186

Query: 106 AGFLNTEL------TEKSDVDSFEIVILEIITGIL 134
             +L  EL      T   D  SF  +  E ITG  
Sbjct: 187 LQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 221

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 47.8 bits (114), Expect = 5e-07
 Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 15/99 (15%)

Query: 44  EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA 103
           EV    L+ +H       I RD+K  N+LL++    KLADFG       EG      T  
Sbjct: 176 EVVL-ALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV-RCDTAV 230

Query: 104 GTAGFLNTELTEKSD--------VD--SFEIVILEIITG 132
           GT  +++ E+ +            D  S  + + E++ G
Sbjct: 231 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 47.7 bits (114), Expect = 5e-07
 Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 10/92 (10%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT----- 101
           C G+ YLH   +H  I RD+ + N+LL+     K+ DFG ++  P     +         
Sbjct: 144 CEGMAYLHA--QH-YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 200

Query: 102 IAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
           +   A       +    SDV SF + + E++T
Sbjct: 201 VFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 47.8 bits (114), Expect = 5e-07
 Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 14/94 (14%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
              Y+H   +  I  RD+K +NIL+++  + KL+DFG+S                GT  F
Sbjct: 163 SFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGESEYMV----DKKIKGSRGTYEF 216

Query: 109 LNTEL--------TEKSDVDSFEIVILEIITGIL 134
           +  E           K D+ S  I +  +   ++
Sbjct: 217 MPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVV 250

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 47.2 bits (113), Expect = 6e-07
 Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 12/92 (13%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT----- 101
           C G+ YL +     +I RD+ + N L+ E    K++DFG +R   V    + S+T     
Sbjct: 114 CEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRF--VLDDQYTSSTGTKFP 168

Query: 102 IAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
           +   +   F  +  + KSDV SF +++ E+ +
Sbjct: 169 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 200

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 47.3 bits (113), Expect = 6e-07
 Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 3/57 (5%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGT 105
           GLEYLH      I+ +D+K  N+LL      K++  G +             T  G+
Sbjct: 121 GLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGS 174

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 47.3 bits (112), Expect = 6e-07
 Identities = 20/103 (19%), Positives = 32/103 (31%), Gaps = 20/103 (19%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQA-----------KLADFGQSRISPVEGG 95
              +E +H      II  D+K  N +L                  L D GQS    +   
Sbjct: 182 LYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPK 238

Query: 96  THMSTTIAGTAGFLNTEL------TEKSDVDSFEIVILEIITG 132
             + T    T+GF   E+        + D       +  ++ G
Sbjct: 239 GTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFG 281

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 47.3 bits (113), Expect = 7e-07
 Identities = 19/112 (16%), Positives = 35/112 (31%), Gaps = 35/112 (31%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNE-------------------KVQAKLADFGQS 87
             GL Y+H      ++  D+K +NI ++                    KV  K+ D G  
Sbjct: 125 GRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHV 181

Query: 88  RISPVEGGTHMSTTIAGTAGFLNTEL-------TEKSDVDSFEIVILEIITG 132
                           G + FL  E+         K+D+ +  + ++     
Sbjct: 182 TR------ISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGA 227

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 47.2 bits (113), Expect = 7e-07
 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 10/56 (17%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQA-----KLADFGQSRI--SPVEGGTH 97
           G+ + H       + RD+K  N+LL+    +     K+ DFG +R    P+   TH
Sbjct: 144 GVNFCHS---RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTH 196

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 47.1 bits (112), Expect = 8e-07
 Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 10/61 (16%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILL----NEKVQAKLADFGQSRISPVEGGTHMSTTIAG 104
           G+ +L    ++ I+ R++K  NI+     + +   KL DFG +R   +E       ++ G
Sbjct: 124 GMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE--LEDDEQF-VSLYG 177

Query: 105 T 105
           T
Sbjct: 178 T 178

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 46.8 bits (112), Expect = 9e-07
 Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 12/92 (13%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT----- 101
           C G+ +L     H  I RD+ + N L++  +  K++DFG +R   V    ++S+      
Sbjct: 114 CEGMAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGMTRY--VLDDQYVSSVGTKFP 168

Query: 102 IAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
           +  +A   F   + + KSDV +F I++ E+ +
Sbjct: 169 VKWSAPEVFHYFKYSSKSDVWAFGILMWEVFS 200

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 47.1 bits (112), Expect = 9e-07
 Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 3/73 (4%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G++Y+H      I+ RD+K  N L+N+    K+ DFG +R        +    I+     
Sbjct: 168 GVKYVHS---AGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDD 224

Query: 109 LNTELTEKSDVDS 121
           +N      +    
Sbjct: 225 MNLVTFPHTKNLK 237

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 46.9 bits (112), Expect = 1e-06
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 9/64 (14%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQA---KLADFGQSRISPVEGGTHMSTTIAGT 105
            + Y H    + I+ R++K  N+LL  K +    KLADFG +    V          AGT
Sbjct: 140 SIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE--VNDSEAW-HGFAGT 193

Query: 106 AGFL 109
            G+L
Sbjct: 194 PGYL 197

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 46.8 bits (111), Expect = 1e-06
 Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 10/61 (16%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILL----NEKVQAKLADFGQSRISPVEGGTHMSTTIAG 104
           G+ +L    ++ I+ R++K  NI+     + +   KL DFG +R   +E       ++ G
Sbjct: 124 GMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE--LEDDEQF-VSLYG 177

Query: 105 T 105
           T
Sbjct: 178 T 178

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 46.8 bits (111), Expect = 1e-06
 Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 11/90 (12%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA----- 103
           G+E+L        I RD+ + NILL+EK   K+ DFG +R    +   ++    A     
Sbjct: 205 GMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGDARLPLK 260

Query: 104 GTA--GFLNTELTEKSDVDSFEIVILEIIT 131
             A     +   T +SDV SF +++ EI +
Sbjct: 261 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 46.6 bits (111), Expect = 1e-06
 Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 10/92 (10%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT----- 101
             G++YL        + RD+ + NIL+N  +  K++DFG  R+   +     +T      
Sbjct: 157 ASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIP 213

Query: 102 IAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
           I  T+       + T  SDV S+ IV+ E+++
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 46.4 bits (111), Expect = 1e-06
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 9/64 (14%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQA---KLADFGQSRISPVEGGTHMSTTIAGT 105
            + Y H    + I+ R++K  N+LL  K +    KLADFG +    V          AGT
Sbjct: 117 SIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE--VNDSEAW-HGFAGT 170

Query: 106 AGFL 109
            G+L
Sbjct: 171 PGYL 174

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 46.4 bits (111), Expect = 1e-06
 Identities = 25/127 (19%), Positives = 43/127 (33%), Gaps = 32/127 (25%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILL---NEKVQAKLADFGQSRISPVEGGTHMSTTIAGT 105
            + Y H+     +  RD+K  N L    +     KL DFG +     + G  M  T  GT
Sbjct: 118 AVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR--FKPGKMM-RTKVGT 171

Query: 106 AGF-----LNTELTEKSDVDSFEIVIL----------------EIITGILTVDLSFKGE- 143
             +     L      + D  S   V++                E++  I     +F  + 
Sbjct: 172 PYYVSPQVLEGLYGPECDEWSAG-VMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKD 230

Query: 144 FDIISVE 150
           +  +S +
Sbjct: 231 WLNVSPQ 237

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 46.5 bits (111), Expect = 1e-06
 Identities = 27/126 (21%), Positives = 43/126 (34%), Gaps = 29/126 (23%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILL---NEKVQAKLADFGQSRISPVEGGTHMSTTIAGT 105
            L Y H    + II RD+K   +LL         KL  FG +    +     ++    GT
Sbjct: 142 ALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ--LGESGLVAGGRVGT 196

Query: 106 AGFLNTELTEKSD----VDSFEI-VIL---------------EIITGILTVDLSFKG-EF 144
             F+  E+ ++      VD +   VIL                +  GI+         ++
Sbjct: 197 PHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQW 256

Query: 145 DIISVE 150
             IS  
Sbjct: 257 SHISES 262

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 46.1 bits (110), Expect = 1e-06
 Identities = 36/127 (28%), Positives = 51/127 (40%), Gaps = 32/127 (25%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILL---NEKVQAKLADFGQSRISPVEGGTHMSTTIAGT 105
           G+ Y+H+   H I+ RD+K  NILL    +    K+ DFG S     +  T M     GT
Sbjct: 133 GITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC--FQQNTKM-KDRIGT 186

Query: 106 AGF-----LNTELTEKSDVDSFEIVIL----------------EIITGILTVDLSFKGE- 143
           A +     L     EK DV S   VIL                +I+  + T   +F    
Sbjct: 187 AYYIAPEVLRGTYDEKCDVWSAG-VILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQ 245

Query: 144 FDIISVE 150
           +  IS +
Sbjct: 246 WRTISDD 252

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 46.3 bits (110), Expect = 1e-06
 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 3/68 (4%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G  ++H+     II RD+K  N LLN+    K+ DFG +R    E  T++   +      
Sbjct: 141 GENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEP 197

Query: 109 LNTELTEK 116
                  K
Sbjct: 198 GPHNKNLK 205

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 46.1 bits (110), Expect = 2e-06
 Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 12/92 (13%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT----- 101
           C  +EYL        + RD+ + N L+N++   K++DFG SR   V    + S+      
Sbjct: 130 CEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSSVGSKFP 184

Query: 102 IAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
           +  +     + ++ + KSD+ +F +++ EI +
Sbjct: 185 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 46.0 bits (110), Expect = 2e-06
 Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 12/92 (13%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT----- 101
             G+ ++ +      I RD+++ NIL+++ +  K+ADFG +R+  +E   + +       
Sbjct: 119 AEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFP 173

Query: 102 IAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
           I  TA         T KSDV SF I++ EI+T
Sbjct: 174 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 46.2 bits (110), Expect = 2e-06
 Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 9/64 (14%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILL---NEKVQAKLADFGQSRISPVEGGTHMSTTIAGT 105
            + YLH+   + I+ RD+K  N+L          K+ADFG S+I  VE    M  T+ GT
Sbjct: 160 AVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKI--VEHQVLM-KTVCGT 213

Query: 106 AGFL 109
            G+ 
Sbjct: 214 PGYC 217

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 46.1 bits (110), Expect = 2e-06
 Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 10/92 (10%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT----- 101
             G+ YL        + RD+ + N+L++  +  K++DFG SR+   +     +TT     
Sbjct: 161 GAGMRYLSD--LG-YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIP 217

Query: 102 IAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
           I  TA         +  SDV SF +V+ E++ 
Sbjct: 218 IRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 45.8 bits (109), Expect = 2e-06
 Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 8/72 (11%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            ++YLH G    ++ RDMK +NILLN +   K+ADFG SR          +  ++     
Sbjct: 121 VIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENT 177

Query: 109 LNTE-----LTE 115
            N +     LT+
Sbjct: 178 ENFDDDQPILTD 189

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 45.7 bits (109), Expect = 2e-06
 Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 9/65 (13%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQA----KLADFGQSRISPVEGGTHMSTTIAG 104
            +EYLH      ++ RD+K +NIL  ++       ++ DFG ++   +     +  T   
Sbjct: 128 TVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ--LRAENGLLMTPCY 182

Query: 105 TAGFL 109
           TA F+
Sbjct: 183 TANFV 187

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 45.9 bits (109), Expect = 2e-06
 Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 18/74 (24%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEK-------------VQAKLADFGQSRISPVEGG 95
           G+ +LH      II RD+K  NIL++               ++  ++DFG  +       
Sbjct: 127 GVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQS 183

Query: 96  THMST--TIAGTAG 107
           +  +     +GT+G
Sbjct: 184 SFRTNLNNPSGTSG 197

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 45.7 bits (109), Expect = 3e-06
 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 6/64 (9%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            ++ LH      +I RD+K +N+L+N     K+ DFG +RI  ++     ++   G    
Sbjct: 124 AVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARI--IDESAADNSEPTGQQSG 178

Query: 109 LNTE 112
           +  E
Sbjct: 179 M-VE 181

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 45.5 bits (108), Expect = 3e-06
 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 5/62 (8%)

Query: 44  EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIA 103
           E+    ++ +H+      + RD+K  NILL+     +LADFG         GT  S    
Sbjct: 170 EIVM-AIDSVHR---LGYVHRDIKPDNILLDRCGHIRLADFGSCLKL-RADGTVRSLVAV 224

Query: 104 GT 105
           GT
Sbjct: 225 GT 226

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 45.3 bits (108), Expect = 3e-06
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 3/48 (6%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGT 96
           GL+Y+H      ++ RD+K +N+LLN     K+ DFG +R++  +   
Sbjct: 140 GLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 45.5 bits (108), Expect = 3e-06
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 5/53 (9%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT 101
            + YL       II RD+K  NI++ E    KL DFG +  + +E G    T 
Sbjct: 142 AVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSA--AYLERGKLFYTF 189

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 45.3 bits (108), Expect = 3e-06
 Identities = 24/92 (26%), Positives = 36/92 (39%), Gaps = 12/92 (13%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT----- 101
           C  + YL        + RD+   NIL+      KL DFG SR   +E   +   +     
Sbjct: 123 CKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRY--IEDEDYYKASVTRLP 177

Query: 102 IAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
           I   +         T  SDV  F + + EI++
Sbjct: 178 IKWMSPESINFRRFTTASDVWMFAVCMWEILS 209

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 45.4 bits (108), Expect = 3e-06
 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 5/51 (9%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLN-EKVQAKLADFGQSRI-SPVEGGTH 97
            L Y+H      I  RD+K  N+LL+      KL DFG ++I    E    
Sbjct: 153 SLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVS 200

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 45.3 bits (108), Expect = 3e-06
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 3/57 (5%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGT 105
           G+ YLH      I  RD+K  N+LL+E+   K++DFG + +        +   + GT
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 45.0 bits (107), Expect = 4e-06
 Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 8/64 (12%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILL---NEKVQAKLADFGQSRISPVEGGTHMSTTIAGT 105
            + ++H      ++ RD+K  N+L    N+ ++ K+ DFG +R+ P +       T   T
Sbjct: 118 AVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLK--TPCFT 172

Query: 106 AGFL 109
             + 
Sbjct: 173 LHYA 176

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 45.0 bits (106), Expect = 4e-06
 Identities = 14/75 (18%), Positives = 28/75 (37%), Gaps = 9/75 (12%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
            L  LH    + ++   ++  +I+L+++    L  F       V  G       + + GF
Sbjct: 218 LLASLHH---YGLVHTYLRPVDIVLDQRGGVFLTGFEHL----VRDGA--RVVSSVSRGF 268

Query: 109 LNTELTEKSDVDSFE 123
              EL  +    S+ 
Sbjct: 269 EPPELEARRATISYH 283

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 45.0 bits (106), Expect = 4e-06
 Identities = 14/96 (14%), Positives = 30/96 (31%), Gaps = 13/96 (13%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI----SPVEGGTHMST---- 100
            L  LH    + ++   ++  +I+L+++    L  F         +    G   +     
Sbjct: 223 LLASLHH---YGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETT 279

Query: 101 --TIAGTAGFLNTELTEKSDVDSFEIVILEIITGIL 134
              +        T +T   D  +  + I  I    L
Sbjct: 280 AERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADL 315

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 44.9 bits (107), Expect = 4e-06
 Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 12/92 (13%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT----- 101
              L YL        + RD+ + N+L++     KL DFG SR   +E  T+   +     
Sbjct: 126 STALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLP 180

Query: 102 IAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
           I   A         T  SDV  F + + EI+ 
Sbjct: 181 IKWMAPESINFRRFTSASDVWMFGVCMWEILM 212

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 45.0 bits (107), Expect = 4e-06
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 3/57 (5%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGT 105
           G+ YLH      I  RD+K  N+LL+E+   K++DFG + +        +   + GT
Sbjct: 117 GVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 44.6 bits (106), Expect = 5e-06
 Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 3/46 (6%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEG 94
           GL  LH+     ++ RD+   NILL +     + DF  +R    + 
Sbjct: 146 GLHVLHEA---GVVHRDLHPGNILLADNNDITICDFNLAREDTADA 188

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 44.6 bits (106), Expect = 5e-06
 Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 10/92 (10%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT----- 101
             G++YL        + RD+ + NIL+N  +  K++DFG SR+   +     +T+     
Sbjct: 157 AAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIP 213

Query: 102 IAGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
           I  TA       + T  SDV SF IV+ E++T
Sbjct: 214 IRWTAPEAISYRKFTSASDVWSFGIVMWEVMT 245

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 44.6 bits (106), Expect = 6e-06
 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 3/40 (7%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR 88
           GL Y+H      II RD+K  N+ +NE  + K+ DFG +R
Sbjct: 140 GLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLAR 176

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 44.6 bits (106), Expect = 6e-06
 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR 88
           GL+Y+H      ++ RD+K  N+ +NE  + K+ DFG +R
Sbjct: 138 GLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR 174

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 44.2 bits (105), Expect = 7e-06
 Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 3/40 (7%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR 88
           GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R
Sbjct: 144 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 180

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 44.5 bits (105), Expect = 7e-06
 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 3/46 (6%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEG 94
           G+++LH      II RD+K +NI++      K+ DFG +R +    
Sbjct: 176 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF 218

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 44.2 bits (105), Expect = 7e-06
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 5/53 (9%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT 101
            ++Y HQ     I+ RD+K+ N+LL+  +  K+ADFG S       G  +   
Sbjct: 126 AVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNE--FTVGGKLDAF 173

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 44.3 bits (105), Expect = 8e-06
 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 3/40 (7%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR 88
           G+++LH      II RD+K +NI++      K+ DFG +R
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 175

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 44.2 bits (105), Expect = 8e-06
 Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 5/53 (9%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT 101
            +EY H   +H I+ RD+K  N+LL++ +  K+ADFG S I  +  G  + T+
Sbjct: 120 AIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNI--MTDGNFLKTS 167

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 43.9 bits (104), Expect = 1e-05
 Identities = 36/127 (28%), Positives = 48/127 (37%), Gaps = 32/127 (25%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQA---KLADFGQSRISPVEGGTHMSTTIAGT 105
           G+ YLH+   H I+ RD+K  NILL  K      K+ DFG S          +     GT
Sbjct: 158 GICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSF--FSKDYKL-RDRLGT 211

Query: 106 AGF-----LNTELTEKSDVDSFEIVIL----------------EIITGILTVDLSFKGE- 143
           A +     L  +  EK DV S   VI+                +II  +      F    
Sbjct: 212 AYYIAPEVLKKKYNEKCDVWSCG-VIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFND 270

Query: 144 FDIISVE 150
           +  IS E
Sbjct: 271 WKNISDE 277

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 43.9 bits (104), Expect = 1e-05
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 4/42 (9%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLN-EKVQAKLADFGQSRI 89
            L Y+H      I  RD+K  N+LL+ +    KL DFG ++ 
Sbjct: 168 SLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 206

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 43.8 bits (104), Expect = 1e-05
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 3/51 (5%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEK-VQAKLADFGQSRI-SPVEGGTH 97
            +  LH      +  RD+K  N+L+NE     KL DFG ++  SP E    
Sbjct: 141 SIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVA 190

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 43.7 bits (104), Expect = 1e-05
 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 10/64 (15%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILL---NEKVQAKLADFGQSRISPVEGGTHMSTTIAGT 105
            ++YLH   ++ I+ RD+K  N+L     E  +  + DFG S++        + +T  GT
Sbjct: 118 AVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM----EQNGIMSTACGT 170

Query: 106 AGFL 109
            G++
Sbjct: 171 PGYV 174

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 43.5 bits (103), Expect = 1e-05
 Identities = 32/127 (25%), Positives = 51/127 (40%), Gaps = 32/127 (25%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQA---KLADFGQSRISPVEGGTHMSTTIAGT 105
           G+ Y+H+   + I+ RD+K  N+LL  K +    ++ DFG S     E    M     GT
Sbjct: 138 GITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTH--FEASKKM-KDKIGT 191

Query: 106 AGF-----LNTELTEKSDVDSFEIVIL----------------EIITGILTVDLSFKGE- 143
           A +     L+    EK DV S   VIL                +I+  +     +F+   
Sbjct: 192 AYYIAPEVLHGTYDEKCDVWSTG-VILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQ 250

Query: 144 FDIISVE 150
           +  +S  
Sbjct: 251 WKKVSES 257

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 43.4 bits (103), Expect = 1e-05
 Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 8/88 (9%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR-ISPVEGGTHMSTTIAGT 105
           C  +EYL     +  + RD+ + N+L++E   AK++DFG ++  S  +    +   +  T
Sbjct: 127 CEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP--VKWT 181

Query: 106 A--GFLNTELTEKSDVDSFEIVILEIIT 131
           A       + + KSDV SF I++ EI +
Sbjct: 182 APEALREKKFSTKSDVWSFGILLWEIYS 209

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 43.5 bits (103), Expect = 1e-05
 Identities = 37/128 (28%), Positives = 52/128 (40%), Gaps = 34/128 (26%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQA---KLADFGQSRISPVEGGTHMSTTIAGT 105
           G+ Y+H+   H I+ RD+K  NILL  K +    K+ DFG S     +  T M     GT
Sbjct: 133 GITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC--FQQNTKM-KDRIGT 186

Query: 106 AGF-----LNTELTEKSDVDSFEI-VIL----------------EIITGILTVDLSFKGE 143
           A +     L     EK DV S    VIL                +I+  + T   +F   
Sbjct: 187 AYYIAPEVLRGTYDEKCDVWS--AGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLP 244

Query: 144 -FDIISVE 150
            +  IS +
Sbjct: 245 QWRTISDD 252

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 43.2 bits (102), Expect = 2e-05
 Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 5/53 (9%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT 101
           G++Y H   +H ++ RD+K  N+LL+  + AK+ADFG S +  +  G  + T+
Sbjct: 128 GVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNM--MSDGEFLRTS 175

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 42.6 bits (101), Expect = 2e-05
 Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 5/53 (9%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT 101
            ++Y H   +H ++ RD+K  N+LL+  + AK+ADFG S +  +  G  + T+
Sbjct: 123 AVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNM--MSDGEFLRTS 170

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 42.8 bits (101), Expect = 3e-05
 Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 32/127 (25%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILL---NEKVQAKLADFGQSRISPVEGGTHMSTTIAGT 105
           G+ YLH+   H I+ RD+K  N+LL    +    K+ DFG S +   E    M     GT
Sbjct: 148 GVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAV--FENQKKM-KERLGT 201

Query: 106 AGF-----LNTELTEKSDVDSFEIVIL----------------EIITGILTVDLSFKGE- 143
           A +     L  +  EK DV S   VIL                EI+  +     +F    
Sbjct: 202 AYYIAPEVLRKKYDEKCDVWSIG-VILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPE 260

Query: 144 FDIISVE 150
           +  +S  
Sbjct: 261 WKNVSEG 267

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 42.3 bits (100), Expect = 3e-05
 Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 15/93 (16%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G+EYL +      + RD+ + N +L+E    K+ADFG +R   +    + S      A  
Sbjct: 136 GMEYLAE---QKFVHRDLAARNCMLDESFTVKVADFGLARD--ILDREYYSVQQHRHARL 190

Query: 109 ---------LNTEL-TEKSDVDSFEIVILEIIT 131
                    L T   T KSDV SF +++ E++T
Sbjct: 191 PVKWTALESLQTYRFTTKSDVWSFGVLLWELLT 223

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 42.4 bits (100), Expect = 3e-05
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 5/51 (9%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLN-EKVQAKLADFGQSR-ISPVEGGTH 97
            + ++H      I  RD+K  N+L+N +    KL DFG ++ + P E    
Sbjct: 153 AVGFIH---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVA 200

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 42.3 bits (100), Expect = 3e-05
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 4/54 (7%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLN-EKVQAKLADFGQSRISPVEGGTHMSTT 101
           GL+Y+H      ++ RD+K  N+ +N E +  K+ DFG +RI           +
Sbjct: 132 GLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLS 182

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 41.6 bits (98), Expect = 7e-05
 Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 9/62 (14%)

Query: 50  LEYLHQGLKHPIIQRDMKSTNILL---NEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
           ++YLH      I  RD+K  N+L          KL DFG ++         + TT   T 
Sbjct: 174 IQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE--TTSHNSL-TTPCYTP 227

Query: 107 GF 108
            +
Sbjct: 228 YY 229

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 41.2 bits (97), Expect = 8e-05
 Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 19/94 (20%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G+EYL    ++  I RD+ + N +L E +   +ADFG SR   +           G A  
Sbjct: 149 GMEYLSS--RN-FIHRDLAARNCMLAEDMTVCVADFGLSR--KIY---SGDYYRQGCASK 200

Query: 109 L-----------NTELTEKSDVDSFEIVILEIIT 131
           L           +   T  SDV +F + + EI+T
Sbjct: 201 LPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 41.1 bits (97), Expect = 8e-05
 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 14/90 (15%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAG---- 104
           G++YL Q  K   I RD+ + NIL+ E   AK+ADFG SR        ++  T+      
Sbjct: 154 GMDYLSQ--KQ-FIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVKKTMGRLPVR 206

Query: 105 -TA--GFLNTELTEKSDVDSFEIVILEIIT 131
             A      +  T  SDV S+ +++ EI++
Sbjct: 207 WMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 40.9 bits (96), Expect = 1e-04
 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 11/91 (12%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR------ISPVEGGTHMSTTI 102
           G+++L    K   + RD+ + N +L+EK   K+ADFG +R         V   T     +
Sbjct: 204 GMKFLAS--KK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 260

Query: 103 AGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
              A       + T KSDV SF +++ E++T
Sbjct: 261 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 291

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 40.8 bits (96), Expect = 1e-04
 Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 19/94 (20%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G+EYL    K   I RD+ + N+L+ E    K+ADFG +R   +            T G 
Sbjct: 203 GMEYLAS--KK-CIHRDLAARNVLVTEDNVMKIADFGLARD--IHHI---DYYKKTTNGR 254

Query: 109 L-----------NTELTEKSDVDSFEIVILEIIT 131
           L           +   T +SDV SF +++ EI T
Sbjct: 255 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 40.3 bits (95), Expect = 1e-04
 Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 11/90 (12%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT-----IA 103
           G+ +L    K+  I RD+ + NILL      K+ DFG +R        ++        + 
Sbjct: 157 GMAFLAS--KN-CIHRDLAARNILLTHGRITKICDFGLARDI-KNDSNYVVKGNARLPVK 212

Query: 104 GTA--GFLNTELTEKSDVDSFEIVILEIIT 131
             A     N   T +SDV S+ I + E+ +
Sbjct: 213 WMAPESIFNCVYTFESDVWSYGIFLWELFS 242

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 40.3 bits (95), Expect = 2e-04
 Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 19/94 (20%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G+EYL    ++  + RD+ + N +L + +   +ADFG S+   +           G    
Sbjct: 159 GMEYLSN--RN-FLHRDLAARNCMLRDDMTVCVADFGLSK--KIY---SGDYYRQGRIAK 210

Query: 109 L-----------NTELTEKSDVDSFEIVILEIIT 131
           +           +   T KSDV +F + + EI T
Sbjct: 211 MPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 39.9 bits (94), Expect = 2e-04
 Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 4/41 (9%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLN-EKVQAKLADFGQSR 88
            L+Y H      I+ RD+K  N++++ E  + +L D+G + 
Sbjct: 142 ALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAE 179

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 18/69 (26%), Positives = 26/69 (37%), Gaps = 11/69 (15%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILL---NEKVQAKLADFGQSRI-----SPVEGGTHMST 100
            L++LH      I  RD+K  NIL    N+    K+ DF                T    
Sbjct: 123 ALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELL 179

Query: 101 TIAGTAGFL 109
           T  G+A ++
Sbjct: 180 TPCGSAEYM 188

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 16/63 (25%), Positives = 25/63 (39%), Gaps = 10/63 (15%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILL---NEKVQAKLADFGQSRISPVEGGTHMSTTIAGT 105
            +++LH    H I  RD+K  N+L     +    KL DFG ++            T   T
Sbjct: 140 AIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE--TTQNALQ--TPCYT 192

Query: 106 AGF 108
             +
Sbjct: 193 PYY 195

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 39.6 bits (93), Expect = 2e-04
 Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 11/91 (12%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR------ISPVEGGTHMSTTI 102
           G++YL    K   + RD+ + N +L+EK   K+ADFG +R         V   T     +
Sbjct: 140 GMKYLAS--KK-FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPV 196

Query: 103 AGTA--GFLNTELTEKSDVDSFEIVILEIIT 131
              A       + T KSDV SF +++ E++T
Sbjct: 197 KWMALESLQTQKFTTKSDVWSFGVLLWELMT 227

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 39.6 bits (93), Expect = 3e-04
 Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 25/97 (25%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT---IAGT 105
           G+E+L    +   I RD+ + NILL+EK   K+ DFG +R         +      +   
Sbjct: 160 GMEFLAS--RK-CIHRDLAARNILLSEKNVVKICDFGLARD--------IYKDPDYVRKG 208

Query: 106 AGFL-----------NTELTEKSDVDSFEIVILEIIT 131
              L           +   T +SDV SF +++ EI +
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 39.6 bits (93), Expect = 3e-04
 Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 4/44 (9%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLN-EKVQAKLADFGQSRISP 91
            + + H      ++ RD+K  NIL++  + + KL DFG   +  
Sbjct: 161 AVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 201

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 39.6 bits (93), Expect = 3e-04
 Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 19/94 (20%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G+ YL+    +  + RD+ + N ++ E    K+ DFG +R   +           G  G 
Sbjct: 150 GMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR--DIYET---DYYRKGGKGL 201

Query: 109 L-----------NTELTEKSDVDSFEIVILEIIT 131
           L           +   T  SDV SF +V+ EI T
Sbjct: 202 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 38.8 bits (91), Expect = 4e-04
 Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 19/94 (20%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G+EYL    +   I RD+ + N+L+ E    K+ADFG +R   +    +       T G 
Sbjct: 169 GMEYLAS--QK-CIHRDLAARNVLVTENNVMKIADFGLAR--DINNIDYY---KKTTNGR 220

Query: 109 L-----------NTELTEKSDVDSFEIVILEIIT 131
           L           +   T +SDV SF +++ EI T
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 38.8 bits (91), Expect = 5e-04
 Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 19/94 (20%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G+ +L    K+  I RD+ + N+LL     AK+ DFG +R   +      S  I      
Sbjct: 176 GMAFLAS--KN-CIHRDVAARNVLLTNGHVAKIGDFGLARD--IMND---SNYIVKGNAR 227

Query: 109 L-----------NTELTEKSDVDSFEIVILEIIT 131
           L           +   T +SDV S+ I++ EI +
Sbjct: 228 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 38.8 bits (91), Expect = 5e-04
 Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 8/58 (13%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLN-EKVQAKLADFGQSRISPVEGGTHMSTTIAGT 105
            +++ H      ++ RD+K  NIL++  +  AKL DFG   +         +    GT
Sbjct: 151 AIQHCHS---RGVVHRDIKDENILIDLRRGCAKLIDFGSGALLH---DEPYTDF-DGT 201

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 38.8 bits (91), Expect = 5e-04
 Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 11/90 (12%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT-----IA 103
           G+E+L    K   + RD+ + N+L+      K+ DFG +R   +    ++        + 
Sbjct: 184 GMEFLEF--KS-CVHRDLAARNVLVTHGKVVKICDFGLAR-DIMSDSNYVVRGNARLPVK 239

Query: 104 GTA--GFLNTELTEKSDVDSFEIVILEIIT 131
             A         T KSDV S+ I++ EI +
Sbjct: 240 WMAPESLFEGIYTIKSDVWSYGILLWEIFS 269

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 38.4 bits (90), Expect = 7e-04
 Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 19/96 (19%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
             G+ YL        + RD+ + N L+   +  K+ DFG SR   V           G  
Sbjct: 143 ASGMVYLAS---QHFVHRDLATRNCLVGANLLVKIGDFGMSRD--VYST---DYYRVGGH 194

Query: 107 G-----------FLNTELTEKSDVDSFEIVILEIIT 131
                        +  + T +SDV SF +++ EI T
Sbjct: 195 TMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 38.1 bits (89), Expect = 8e-04
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 5/44 (11%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQA--KLADFGQSRIS 90
           G+ Y H      I  RD+K  N LL+       K+ DFG S+ S
Sbjct: 128 GVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSS 168

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 38.0 bits (89), Expect = 8e-04
 Identities = 20/96 (20%), Positives = 33/96 (34%), Gaps = 16/96 (16%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQ--------AKLADFGQSRISPVEGGTHM 98
              + +L +     +I  ++ + NILL  +           KL+D G S    V     +
Sbjct: 123 AAAMHFLEE--NT-LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISIT--VLPKDIL 177

Query: 99  STTIAGTA--GFLNT-ELTEKSDVDSFEIVILEIIT 131
              I         N   L   +D  SF   + EI +
Sbjct: 178 QERIPWVPPECIENPKNLNLATDKWSFGTTLWEICS 213

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	188
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.98
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.98
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.98
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.98
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.98
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.98
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.98
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.98
3bhy_A	283	Death-associated protein kinase 3; death associate	99.98
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.98
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.98
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.98
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.98
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.97
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.97
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.97
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.97
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.97
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.97
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.97
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.97
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.97
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.97
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.97
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.97
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.97
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.97
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.97
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.97
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.97
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.97
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.97
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.97
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.97
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.97
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.97
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.97
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.97
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.97
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.97
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.97
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.97
3uqc_A	286	Probable conserved transmembrane protein; structur	99.97
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.97
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.97
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.97
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.97
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.97
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.97
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.97
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.97
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.97
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.97
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.97
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.97
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.97
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.94
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.94
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.93
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.8
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.53
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.31
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.07
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	98.31
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.22
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	97.76
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	97.53
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	96.63
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	96.55
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	95.76
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	95.52
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	94.28
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	92.32
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	91.08
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	90.69
3ats_A	357	Putative uncharacterized protein; hypothetical pro	90.43
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	89.89
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	86.73
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	86.32
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	85.98
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	85.14
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	84.86
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	81.13
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	81.08

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=7e-48  Score=297.64  Aligned_cols=176  Identities=26%  Similarity=0.346  Sum_probs=144.3

Q ss_pred             cccccCCCeeeeccc--CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      |++++|||||+++++  .++.++|||||++|+|.+++ ....            |+|.||+|||+   .+|+||||||+|
T Consensus        86 l~~l~HpNIV~l~g~~~~~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~---~~IiHRDlKp~N  162 (307)
T 3omv_A           86 LRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNN  162 (307)
T ss_dssp             HTTCCCTTBCCEEEEECSSSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCSSS
T ss_pred             HHhCCCCCEeeEEEEEECCeEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCccCHHH
Confidence            678999999999999  77899999999999999999 3222            99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC---------CCCccchHHHHHHHHHHHhCCccccccCC
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE---------LTEKSDVDSFEIVILEIITGILTVDLSFK  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe---------~~~~~di~s~G~~l~~~~~g~~p~~~~~~  141 (188)
                      ||++.++.+||+|||+++...............||+.|||||         ++.++|||||||++|||++|+.||.....
T Consensus       163 ILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~  242 (307)
T 3omv_A          163 IFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN  242 (307)
T ss_dssp             EEEETTEEEEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC
T ss_pred             EEECCCCcEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCCh
Confidence            999999999999999998654223333345578999999998         46689999999999999999999954211


Q ss_pred             -----------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCcc
Q 039565          142 -----------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGSR  184 (188)
Q Consensus       142 -----------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~~  184 (188)
                                       ...+..++..+.+++..||+.+|++||||++|++.|+.+...-
T Consensus       243 ~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l  302 (307)
T 3omv_A          243 RDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL  302 (307)
T ss_dssp             HHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence                             1233456778999999999999999999999999998876543

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=2.1e-46  Score=292.39  Aligned_cols=174  Identities=19%  Similarity=0.181  Sum_probs=140.4

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc-----------------c---------cHHHHHHHHhc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE-----------------E---------VCCPGLEYLHQ   55 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~-----------------~---------~i~~~l~~Lh~   55 (188)
                      |++++|||||+++|+   .+..++|||||++|+|.+++ ...                 .         |+|.||.|||+
T Consensus        97 l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~  176 (329)
T 4aoj_A           97 LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG  176 (329)
T ss_dssp             HTTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence            678999999999999   77899999999999999998 211                 1         99999999999


Q ss_pred             CCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHH
Q 039565           56 GLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEI  129 (188)
Q Consensus        56 ~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~  129 (188)
                         .+|+||||||+|||++.++.+||+|||+++...............||+.|+|||      ++.++|||||||++|||
T Consensus       177 ---~~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~El  253 (329)
T 4aoj_A          177 ---LHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEI  253 (329)
T ss_dssp             ---TTCCCSCCCGGGEEEETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred             ---CCeecccccHhhEEECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHH
Confidence               999999999999999999999999999998653222222334567899999999      78999999999999999


Q ss_pred             Hh-CCcccccc------------CCCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          130 IT-GILTVDLS------------FKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       130 ~~-g~~p~~~~------------~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                      +| |+.||...            ...+.+..++..+.+++..||+.||++||||++|++.|+.+.+
T Consensus       254 lt~G~~Pf~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~  319 (329)
T 4aoj_A          254 FTYGKQPWYQLSNTEAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ  319 (329)
T ss_dssp             HTTSCCTTCSSCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HcCCCCCCCCCCHHHHHHHHHcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence            98 89998542            1233455567889999999999999999999999999988754

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=2.6e-47  Score=293.98  Aligned_cols=174  Identities=18%  Similarity=0.192  Sum_probs=147.1

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CC---------------cc---------cHHHHHHHHhcCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GK---------------EE---------VCCPGLEYLHQGL   57 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~---------------~~---------~i~~~l~~Lh~~~   57 (188)
                      |++++|||||+++|+   ++..++|||||++|+|.+++ ..               ..         |++.||.|||+  
T Consensus        69 l~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~--  146 (299)
T 4asz_A           69 LTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS--  146 (299)
T ss_dssp             HTTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH--
T ss_pred             HHhCCCCCCccEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh--
Confidence            678999999999999   77899999999999999999 21               11         99999999999  


Q ss_pred             CCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh
Q 039565           58 KHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT  131 (188)
Q Consensus        58 ~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~  131 (188)
                       .+|+||||||+|||++.++.+||+|||+++...............||+.|+|||      ++.++|||||||++|||+|
T Consensus       147 -~~iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt  225 (299)
T 4asz_A          147 -QHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT  225 (299)
T ss_dssp             -TTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred             -CCcccCccCHhhEEECCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHc
Confidence             999999999999999999999999999998543222222223356899999999      7999999999999999998


Q ss_pred             -CCccccccC------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          132 -GILTVDLSF------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       132 -g~~p~~~~~------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                       |+.||....            ..+.+..++..+.+++..||+.+|++||||++|++.|+++..
T Consensus       226 ~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~  289 (299)
T 4asz_A          226 YGKQPWYQLSNNEVIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK  289 (299)
T ss_dssp             TTCCTTTTSCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence             899985421            123445667889999999999999999999999999987654

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=1.5e-46  Score=290.85  Aligned_cols=172  Identities=18%  Similarity=0.248  Sum_probs=146.2

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc------------------c---------cHHHHHHHHh
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE------------------E---------VCCPGLEYLH   54 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~------------------~---------~i~~~l~~Lh   54 (188)
                      |++++|||||+++|+   ++..++|||||++|+|.+++ .+.                  .         |+|.||.|||
T Consensus        83 l~~l~HpNIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH  162 (308)
T 4gt4_A           83 RARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS  162 (308)
T ss_dssp             HHHCCCTTBCCEEEEECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhCCCCCCCCcceEEEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH
Confidence            568999999999999   77899999999999999998 221                  0         9999999999


Q ss_pred             cCCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHH
Q 039565           55 QGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILE  128 (188)
Q Consensus        55 ~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~  128 (188)
                      +   .+|+||||||+|||+++++.+||+|||+++...............||+.|+|||      ++.++|||||||++||
T Consensus       163 ~---~~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~E  239 (308)
T 4gt4_A          163 S---HHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWE  239 (308)
T ss_dssp             H---TTCCCSCCSGGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             h---CCCCCCCccccceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHH
Confidence            9   999999999999999999999999999998653222222334567899999999      7999999999999999


Q ss_pred             HHh-CCccccccC------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhc
Q 039565          129 IIT-GILTVDLSF------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQG  180 (188)
Q Consensus       129 ~~~-g~~p~~~~~------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~  180 (188)
                      |+| |..||....            ..+.+..++..+.+++..||+.+|++||||++|++.|+..
T Consensus       240 l~t~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~  304 (308)
T 4gt4_A          240 VFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW  304 (308)
T ss_dssp             HHTTTCCTTTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             HHhCCCCCCCCCCHHHHHHHHHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            998 888985421            1234456678899999999999999999999999999865

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=2.7e-45  Score=285.97  Aligned_cols=173  Identities=21%  Similarity=0.250  Sum_probs=143.2

Q ss_pred             CcccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC---cc---------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            5 NRNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK---EE---------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~---~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      -|++++|||||+++++   ++..++|||||++|+|.+++++   ..         |++.||+|||+   .+|+||||||+
T Consensus       103 il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~  179 (336)
T 4g3f_A          103 ACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHT---RRILHGDVKAD  179 (336)
T ss_dssp             TTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCCGG
T ss_pred             HHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHH
Confidence            3678999999999999   7889999999999999999922   22         99999999999   99999999999


Q ss_pred             cEEEccCC-ceEEecccCcccccCCCCC---cceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCcccccc
Q 039565           70 NILLNEKV-QAKLADFGQSRISPVEGGT---HMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLS  139 (188)
Q Consensus        70 nill~~~~-~~kl~d~~~~~~~~~~~~~---~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~  139 (188)
                      |||++.+| .+||+|||+++........   .......||+.|+|||      ++.++|||||||++|+|++|..||...
T Consensus       180 NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~  259 (336)
T 4g3f_A          180 NVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQY  259 (336)
T ss_dssp             GEEECTTSCCEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTT
T ss_pred             HEEEeCCCCEEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCC
Confidence            99999887 6999999999865322111   1123457999999999      789999999999999999999999654


Q ss_pred             CCC--------------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhc
Q 039565          140 FKG--------------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQG  180 (188)
Q Consensus       140 ~~~--------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~  180 (188)
                      ...              +.+...+..+.+++..||+.||.+|||+.|+++.|...
T Consensus       260 ~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~  314 (336)
T 4g3f_A          260 FRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKA  314 (336)
T ss_dssp             CCSCCHHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CHHHHHHHHHcCCCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence            322              23345567899999999999999999999999987654

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=5.5e-45  Score=279.54  Aligned_cols=163  Identities=22%  Similarity=0.358  Sum_probs=136.5

Q ss_pred             cccccCCCeeeeccc-------CCccEEEEecCCCCChhhhcCC---cc---------cHHHHHHHHhcCCCCC--cEEe
Q 039565            6 RNKLTGPLLVELIGK-------QKNNALELGFRGNPELVDQQGK---EE---------VCCPGLEYLHQGLKHP--IIQR   64 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-------~~~~~lv~e~~~~~~L~~~~~~---~~---------~i~~~l~~Lh~~~~~~--i~h~   64 (188)
                      |++++|||||+++++       ....++|||||++|+|.+++.+   ..         |++.||+|||+   .+  |+||
T Consensus        79 l~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~---~~~~IiHR  155 (290)
T 3fpq_A           79 LKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHR  155 (290)
T ss_dssp             HHTCCCTTBCCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCC
T ss_pred             HHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCCCEEec
Confidence            578999999999987       2457999999999999999922   22         99999999998   77  9999


Q ss_pred             CCCCCcEEEcc-CCceEEecccCcccccCCCCCcceeeecccccccCCC-----CCCccchHHHHHHHHHHHhCCccccc
Q 039565           65 DMKSTNILLNE-KVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-----LTEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        65 dl~~~nill~~-~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-----~~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      ||||+|||++. ++.+||+|||+++...    .....+..||+.|+|||     ++.++|||||||++|+|++|..||..
T Consensus       156 DlKp~NILl~~~~g~vKl~DFGla~~~~----~~~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~  231 (290)
T 3fpq_A          156 DLKCDNIFITGPTGSVKIGDLGLATLKR----ASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSE  231 (290)
T ss_dssp             CCCGGGEEESSTTSCEEECCTTGGGGCC----TTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             ccChhheeEECCCCCEEEEeCcCCEeCC----CCccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence            99999999985 7899999999997532    12344678999999999     78999999999999999999999954


Q ss_pred             cCC--------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          139 SFK--------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       139 ~~~--------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ...              ...+...+..+.+++..||+.||++|||++++++
T Consensus       232 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          232 CQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             CSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCcHHHHHHHHHcCCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            211              1122334567899999999999999999999986

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=1.8e-44  Score=282.17  Aligned_cols=165  Identities=18%  Similarity=0.189  Sum_probs=141.8

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc--CCcc---------cHHHHHHHHhcCCCCCcEEeCCCCCcE
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ--GKEE---------VCCPGLEYLHQGLKHPIIQRDMKSTNI   71 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~--~~~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~ni   71 (188)
                      |++++|||||+++++   .+..|+|||||++|+|.+++  ....         |++.||+|||+   .+|+||||||+||
T Consensus       125 l~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NI  201 (346)
T 4fih_A          125 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSI  201 (346)
T ss_dssp             HHHCCCTTBCCEEEEEEETTEEEEEECCCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGE
T ss_pred             HHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHE
Confidence            567899999999999   88999999999999999998  3232         99999999999   9999999999999


Q ss_pred             EEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC-----
Q 039565           72 LLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF-----  140 (188)
Q Consensus        72 ll~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~-----  140 (188)
                      |++.++.+||+|||+++....  ......+..||+.|+|||      ++.++|||||||++|+|++|..||....     
T Consensus       202 Ll~~~g~vKl~DFGla~~~~~--~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~  279 (346)
T 4fih_A          202 LLTHDGRVKLSDFGFCAQVSK--EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM  279 (346)
T ss_dssp             EECTTCCEEECCCTTCEECCS--SSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH
T ss_pred             EECCCCCEEEecCcCceecCC--CCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH
Confidence            999999999999999986432  222345678999999999      7899999999999999999999995421     


Q ss_pred             ---------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          141 ---------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       141 ---------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                               ........+..+.+++..||+.||++|||++|+++
T Consensus       280 ~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~  323 (346)
T 4fih_A          280 KMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  323 (346)
T ss_dssp             HHHHHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHcCCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence                     11122345678999999999999999999999987

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=4.1e-45  Score=287.34  Aligned_cols=175  Identities=21%  Similarity=0.205  Sum_probs=145.2

Q ss_pred             cccccC-CCeeeeccc----CCccEEEEecCCCCChhhhc-CC-c-----------------c---------cHHHHHHH
Q 039565            6 RNKLTG-PLLVELIGK----QKNNALELGFRGNPELVDQQ-GK-E-----------------E---------VCCPGLEY   52 (188)
Q Consensus         6 l~~l~H-pniv~~~~~----~~~~~lv~e~~~~~~L~~~~-~~-~-----------------~---------~i~~~l~~   52 (188)
                      |.+++| ||||+++|+    +...++|||||++|+|.+++ .. .                 .         |+|.||.|
T Consensus       121 l~~l~hhpnIV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~y  200 (353)
T 4ase_A          121 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEF  200 (353)
T ss_dssp             HHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHH
T ss_pred             HHHcCCCCcEEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHh
Confidence            456655 999999997    35689999999999999998 21 0                 1         89999999


Q ss_pred             HhcCCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHH
Q 039565           53 LHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVI  126 (188)
Q Consensus        53 Lh~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l  126 (188)
                      ||+   .+|+||||||+|||++.++.+||+|||+++...............||+.|+|||      ++.++|||||||++
T Consensus       201 LH~---~~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l  277 (353)
T 4ase_A          201 LAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL  277 (353)
T ss_dssp             HHH---TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred             Hhh---CCeecCccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHH
Confidence            999   999999999999999999999999999998654333333344567899999999      79999999999999


Q ss_pred             HHHHh-CCccccccC-------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          127 LEIIT-GILTVDLSF-------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       127 ~~~~~-g~~p~~~~~-------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                      |||+| |..||....             ....+...+..+.+++..||+.||++||||++|++.|+.+.+.
T Consensus       278 ~El~t~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~  348 (353)
T 4ase_A          278 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  348 (353)
T ss_dssp             HHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence            99998 899986432             1223445667899999999999999999999999999876543

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=1.5e-44  Score=279.43  Aligned_cols=178  Identities=19%  Similarity=0.191  Sum_probs=138.5

Q ss_pred             cccccCCCeeeeccc---C----CccEEEEecCCCCChhhhcCCcc-----------cHHHHHHHHhcCC-----CCCcE
Q 039565            6 RNKLTGPLLVELIGK---Q----KNNALELGFRGNPELVDQQGKEE-----------VCCPGLEYLHQGL-----KHPII   62 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~----~~~~lv~e~~~~~~L~~~~~~~~-----------~i~~~l~~Lh~~~-----~~~i~   62 (188)
                      +.+++|||||+++++   +    ...++||||+++|+|.+++++.+           |++.||+|||+..     ..+|+
T Consensus        51 ~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~Ii  130 (303)
T 3hmm_A           51 TVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA  130 (303)
T ss_dssp             STTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEE
T ss_pred             HhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEe
Confidence            567899999999999   2    25799999999999999993222           9999999999721     13899


Q ss_pred             EeCCCCCcEEEccCCceEEecccCcccccCCCCC--cceeeecccccccCCCC------------CCccchHHHHHHHHH
Q 039565           63 QRDMKSTNILLNEKVQAKLADFGQSRISPVEGGT--HMSTTIAGTAGFLNTEL------------TEKSDVDSFEIVILE  128 (188)
Q Consensus        63 h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~pe~------------~~~~di~s~G~~l~~  128 (188)
                      ||||||+|||++.++.+||+|||+++........  .......||+.|+|||.            +.++|||||||++||
T Consensus       131 HRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~E  210 (303)
T 3hmm_A          131 HRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE  210 (303)
T ss_dssp             CSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             eccCCcccEEECCCCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHH
Confidence            9999999999999999999999999865422221  12234679999999992            347999999999999


Q ss_pred             HHhCCccccccC----------------------------CCCc-----CHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          129 IITGILTVDLSF----------------------------KGEF-----DIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       129 ~~~g~~p~~~~~----------------------------~~~~-----~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      |++|..|+....                            ....     +...+..+.+++..||+.||++||||.+|++
T Consensus       211 l~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~  290 (303)
T 3hmm_A          211 IARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK  290 (303)
T ss_dssp             HHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred             HHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence            999976542110                            0111     1245567899999999999999999999999


Q ss_pred             HHhhccCc
Q 039565          176 VREQGSGS  183 (188)
Q Consensus       176 ~l~~~~~~  183 (188)
                      .|+++.++
T Consensus       291 ~L~~l~~~  298 (303)
T 3hmm_A          291 TLSQLSQQ  298 (303)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHHH
Confidence            99988654

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=2.9e-45  Score=282.91  Aligned_cols=166  Identities=25%  Similarity=0.378  Sum_probs=142.7

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC---cc---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK---EE---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~---~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      |++++|||||+++++   .++.++|||||++|+|.+++.+   ..         |++.||+|||+   .+|+||||||+|
T Consensus        86 l~~l~HpnIv~l~~~~~~~~~~yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDlKPeN  162 (311)
T 4aw0_A           86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPEN  162 (311)
T ss_dssp             HTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGG
T ss_pred             HHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHH
Confidence            578899999999999   7889999999999999999922   22         99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC---
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK---  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~---  141 (188)
                      ||++.++.+||+|||+++............+.+||+.|+|||      ++.++|+||+||++|+|++|..||.....   
T Consensus       163 ILl~~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~  242 (311)
T 4aw0_A          163 ILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLI  242 (311)
T ss_dssp             EEECTTSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             eEEcCCCCEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            999999999999999998754333333455678999999999      78899999999999999999999964321   


Q ss_pred             --------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHH
Q 039565          142 --------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVV  174 (188)
Q Consensus       142 --------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~  174 (188)
                              ..++...+..+.+++..||+.||++|||++|++
T Consensus       243 ~~~i~~~~~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~  283 (311)
T 4aw0_A          243 FAKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEME  283 (311)
T ss_dssp             HHHHHHTCCCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred             HHHHHcCCCCCCcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence                    224445567899999999999999999998863

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=9.2e-45  Score=284.22  Aligned_cols=165  Identities=20%  Similarity=0.293  Sum_probs=140.7

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc--CCcc------------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ--GKEE------------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~--~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      |++++|||||+++++   ++..|+|||||++|+|.+++  ++..            |++.||.|||+   .+|+||||||
T Consensus        77 l~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp  153 (350)
T 4b9d_A           77 LANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHD---RKILHRDIKS  153 (350)
T ss_dssp             HHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCEETTCCG
T ss_pred             HHHCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCH
Confidence            567899999999999   88899999999999999999  2211            99999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC-
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK-  141 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~-  141 (188)
                      +|||++.++.+||+|||+++...  ..........||+.|+|||      ++.++|||||||++|+|++|..||..... 
T Consensus       154 ~NILl~~~g~vKl~DFGla~~~~--~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~  231 (350)
T 4b9d_A          154 QNIFLTKDGTVQLGDFGIARVLN--STVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK  231 (350)
T ss_dssp             GGEEECTTCCEEECSTTEESCCC--HHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             HHEEECCCCCEEEcccccceeec--CCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH
Confidence            99999999999999999998542  1112234567999999999      78899999999999999999999964321 


Q ss_pred             -----------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 -----------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 -----------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                 ...+...+..+.+++..||+.||++|||++++++
T Consensus       232 ~~~~~i~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          232 NLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE  276 (350)
T ss_dssp             HHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHcCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                       1233445678999999999999999999999986

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=1.2e-43  Score=283.73  Aligned_cols=165  Identities=18%  Similarity=0.183  Sum_probs=141.6

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc--CCcc---------cHHHHHHHHhcCCCCCcEEeCCCCCcE
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ--GKEE---------VCCPGLEYLHQGLKHPIIQRDMKSTNI   71 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~--~~~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~ni   71 (188)
                      |++++|||||+++++   .+.+|+|||||++|+|.+++  ....         |++.||+|||+   .+|+||||||+||
T Consensus       202 l~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~---~~IiHRDiKp~NI  278 (423)
T 4fie_A          202 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSI  278 (423)
T ss_dssp             HHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSTTTE
T ss_pred             HHhCCCCCCCceEEEEEECCEEEEEEeCCCCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHE
Confidence            577899999999999   88999999999999999999  3333         99999999999   9999999999999


Q ss_pred             EEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC----
Q 039565           72 LLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK----  141 (188)
Q Consensus        72 ll~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~----  141 (188)
                      |++.+|.+||+|||+++....  ........+||+.|||||      ++.++|||||||++|+|++|..||.....    
T Consensus       279 Ll~~~g~vKl~DFGla~~~~~--~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~  356 (423)
T 4fie_A          279 LLTHDGRVKLSDFGFCAQVSK--EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM  356 (423)
T ss_dssp             EECTTCCEEECCCTTCEECCS--SCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH
T ss_pred             EEcCCCCEEEecCccceECCC--CCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH
Confidence            999999999999999986432  222345678999999999      78999999999999999999999954211    


Q ss_pred             ----------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 ----------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 ----------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                .......+..+.+++..||+.||++|||++|+++
T Consensus       357 ~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~  400 (423)
T 4fie_A          357 KMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  400 (423)
T ss_dssp             HHHHHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHcCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence                      1122345678899999999999999999999987

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=2.5e-44  Score=277.29  Aligned_cols=166  Identities=25%  Similarity=0.277  Sum_probs=139.8

Q ss_pred             CcccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC---cc---------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            5 NRNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK---EE---------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~---~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      -|++++|||||+++++   ++..++|||||++|+|.+++.+   ..         |++.||+|||+   .+|+||||||+
T Consensus        79 il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~  155 (304)
T 3ubd_A           79 ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPE  155 (304)
T ss_dssp             CCCCCCCTTEECEEEEEEETTEEEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGG
T ss_pred             HHHHCCCCCCCeEEEEEEECCEEEEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHH
Confidence            3778999999999999   8889999999999999999922   22         99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC--
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK--  141 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~--  141 (188)
                      |||++.++.+||+|||+++....  ......+..||+.|+|||      ++.++|+||+||++|+|++|..||.....  
T Consensus       156 NILl~~~g~vKl~DFGla~~~~~--~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~  233 (304)
T 3ubd_A          156 NILLDEEGHIKLTDFGLSKESID--HEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE  233 (304)
T ss_dssp             GEEECTTSCEEEESSEEEEC-------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             HeEEcCCCCEEecccccceeccC--CCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHH
Confidence            99999999999999999985421  222344578999999999      78999999999999999999999964321  


Q ss_pred             ---------CCcCHHHHHHHHHHHHHccCcCCCCCCC-----HHHHHH
Q 039565          142 ---------GEFDIISVEKAVEIAMASVSSKVNRRPL-----MNQVVM  175 (188)
Q Consensus       142 ---------~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~i~~  175 (188)
                               ...+...+..+.+++..||+.||++|||     ++|+++
T Consensus       234 ~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~  281 (304)
T 3ubd_A          234 TMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR  281 (304)
T ss_dssp             HHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred             HHHHHHcCCCCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence                     2234456678999999999999999998     467765

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=1.1e-43  Score=270.32  Aligned_cols=168  Identities=21%  Similarity=0.302  Sum_probs=132.9

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      |++++|||||+++++   .+..++||||+ +|+|.+++ ++..           |++.||+|||+   .+|+||||||+|
T Consensus        67 l~~l~HpnIv~~~~~~~~~~~~~ivmEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDiKP~N  142 (275)
T 3hyh_A           67 LRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPEN  142 (275)
T ss_dssp             HHHCCCTTBCCEEEEEECSSEEEEEEECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTT
T ss_pred             HHHCCCCCCCeEEEEEEECCEEEEEEeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCChHH
Confidence            567899999999999   78899999999 57999988 3222           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------C-CCccchHHHHHHHHHHHhCCccccccCC--
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------L-TEKSDVDSFEIVILEIITGILTVDLSFK--  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~-~~~~di~s~G~~l~~~~~g~~p~~~~~~--  141 (188)
                      |+++.++.+||+|||+++...   ......+..||+.|+|||      + +.++||||+||++|+|++|..||+....  
T Consensus       143 ILl~~~~~vkl~DFGla~~~~---~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~  219 (275)
T 3hyh_A          143 LLLDEHLNVKIADFGLSNIMT---DGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV  219 (275)
T ss_dssp             EEECTTCCEEECCSSCC------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             eEECCCCCEEEeecCCCeecC---CCCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHH
Confidence            999999999999999997543   222334578999999999      3 5789999999999999999999965321  


Q ss_pred             ---------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH--HHhhc
Q 039565          142 ---------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM--VREQG  180 (188)
Q Consensus       142 ---------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~--~l~~~  180 (188)
                               ..++...+..+.+++..||+.||++|||++|+++  .++..
T Consensus       220 ~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~~  269 (275)
T 3hyh_A          220 LFKNISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVD  269 (275)
T ss_dssp             HHHHHHHTCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHTT
T ss_pred             HHHHHHcCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcCcccccC
Confidence                     1233445678899999999999999999999998  45443

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=5.5e-41  Score=258.78  Aligned_cols=164  Identities=19%  Similarity=0.283  Sum_probs=125.7

Q ss_pred             cccccCCCeeeeccc---CC------------ccEEEEecCCCCChhhhc-CCcc--------------cHHHHHHHHhc
Q 039565            6 RNKLTGPLLVELIGK---QK------------NNALELGFRGNPELVDQQ-GKEE--------------VCCPGLEYLHQ   55 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~------------~~~lv~e~~~~~~L~~~~-~~~~--------------~i~~~l~~Lh~   55 (188)
                      |++++|||||+++++   .+            ..+++||||++|+|.+++ .+..              |++.||+|||+
T Consensus        57 l~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~  136 (299)
T 4g31_A           57 LAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHS  136 (299)
T ss_dssp             HTTCCCTTBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhCCCCCCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHH
Confidence            678999999999987   11            268999999999999999 3221              99999999999


Q ss_pred             CCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCC----------cceeeecccccccCCC------CCCccch
Q 039565           56 GLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGT----------HMSTTIAGTAGFLNTE------LTEKSDV  119 (188)
Q Consensus        56 ~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~----------~~~~~~~~~~~~~~pe------~~~~~di  119 (188)
                         .+|+||||||+|||++.++.+||+|||+++........          .......||+.|+|||      ++.++||
T Consensus       137 ---~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~Di  213 (299)
T 4g31_A          137 ---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDI  213 (299)
T ss_dssp             ---TTCCCCCCCGGGEEECTTCCEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHH
T ss_pred             ---CcCccccCcHHHeEECCCCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHH
Confidence               99999999999999999999999999999864321111          1123457999999999      7899999


Q ss_pred             HHHHHHHHHHHhCCccccccC----------CCCcCH---HHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          120 DSFEIVILEIITGILTVDLSF----------KGEFDI---ISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       120 ~s~G~~l~~~~~g~~p~~~~~----------~~~~~~---~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      |||||++|+|++   ||....          ...++.   .....+.+++..||+.||++|||+.++++
T Consensus       214 wSlGvilyell~---Pf~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  279 (299)
T 4g31_A          214 FSLGLILFELLY---PFSTQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE  279 (299)
T ss_dssp             HHHHHHHHHHHS---CCSSHHHHHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHHcc---CCCCccHHHHHHHHHhcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            999999999996   553211          112222   23345678999999999999999999987

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.3e-39  Score=259.78  Aligned_cols=166  Identities=17%  Similarity=0.158  Sum_probs=134.4

Q ss_pred             cccccCCCeeeeccc---------CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEe
Q 039565            6 RNKLTGPLLVELIGK---------QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQR   64 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---------~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~   64 (188)
                      |++++|||||+++++         .+..|+||||++ |+|.+++.+.+            |++.||.|||+   .+|+||
T Consensus       107 l~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~---~~iiHR  182 (398)
T 4b99_A          107 LKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHS---AQVIHR  182 (398)
T ss_dssp             HHHCCCTTBCCEEEECCCSSCTTTCCCEEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCC
T ss_pred             HHhcCCCCcceEeeeeecccccccCCEEEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CcCcCC
Confidence            567899999999987         256799999997 68999983322            99999999999   999999


Q ss_pred             CCCCCcEEEccCCceEEecccCcccccCCC--CCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCcc
Q 039565           65 DMKSTNILLNEKVQAKLADFGQSRISPVEG--GTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILT  135 (188)
Q Consensus        65 dl~~~nill~~~~~~kl~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p  135 (188)
                      ||||+|||++.++.+|++|||+++......  ......+..||+.|+|||       ++.++||||+||++|+|++|..|
T Consensus       183 DlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~p  262 (398)
T 4b99_A          183 DLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQL  262 (398)
T ss_dssp             CCCGGGEEECTTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCS
T ss_pred             CcCccccccCCCCCEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCC
Confidence            999999999999999999999998643211  122344578999999999       47889999999999999999999


Q ss_pred             ccccCCC-------------------------------------CcC-----HHHHHHHHHHHHHccCcCCCCCCCHHHH
Q 039565          136 VDLSFKG-------------------------------------EFD-----IISVEKAVEIAMASVSSKVNRRPLMNQV  173 (188)
Q Consensus       136 ~~~~~~~-------------------------------------~~~-----~~~~~~~~~l~~~cl~~~p~~Rps~~~i  173 (188)
                      |......                                     ..+     ...+..+.+++.+||+.||.+|||++|+
T Consensus       263 F~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~  342 (398)
T 4b99_A          263 FPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAA  342 (398)
T ss_dssp             SCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred             CCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHH
Confidence            9532100                                     000     0124578899999999999999999999


Q ss_pred             HH
Q 039565          174 VM  175 (188)
Q Consensus       174 ~~  175 (188)
                      ++
T Consensus       343 L~  344 (398)
T 4b99_A          343 LR  344 (398)
T ss_dssp             TT
T ss_pred             hc
Confidence            87

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=2.8e-39  Score=255.17  Aligned_cols=166  Identities=17%  Similarity=0.167  Sum_probs=132.8

Q ss_pred             ccc-cCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc---------cHHHHHHHHhcCCCCCcEEeCCCCCcEEE
Q 039565            7 NKL-TGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE---------VCCPGLEYLHQGLKHPIIQRDMKSTNILL   73 (188)
Q Consensus         7 ~~l-~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~nill   73 (188)
                      .++ +||||++++++   .++.++||||+++|+|.++++...         |++.||+|||+   .+|+||||||+|||+
T Consensus        74 ~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH~---~gIiHRDiKPeNiLl  150 (361)
T 4f9c_A           74 TVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQ---FGIVHRDVKPSNFLY  150 (361)
T ss_dssp             HHTCSBTTBCCCSEEEEETTEEEEEEECCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEE
T ss_pred             HHhcCCCCCceEEEEEEECCEEEEEEeCCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCcCCHHHeEE
Confidence            344 69999999998   889999999999999999995555         99999999999   999999999999999


Q ss_pred             ccC-CceEEecccCcccccCCCC--------------------------CcceeeecccccccCCC-------CCCccch
Q 039565           74 NEK-VQAKLADFGQSRISPVEGG--------------------------THMSTTIAGTAGFLNTE-------LTEKSDV  119 (188)
Q Consensus        74 ~~~-~~~kl~d~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~pe-------~~~~~di  119 (188)
                      +.+ +.+||+|||+++.......                          ........||+.|+|||       ++.++|+
T Consensus       151 ~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~Di  230 (361)
T 4f9c_A          151 NRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDM  230 (361)
T ss_dssp             ETTTTEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHH
T ss_pred             eCCCCeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccch
Confidence            877 7999999999975321110                          01123457999999999       5788999


Q ss_pred             HHHHHHHHHHHhCCccccccCCCC--------------------------------------------------------
Q 039565          120 DSFEIVILEIITGILTVDLSFKGE--------------------------------------------------------  143 (188)
Q Consensus       120 ~s~G~~l~~~~~g~~p~~~~~~~~--------------------------------------------------------  143 (188)
                      ||+||++|+|++|+.||.......                                                        
T Consensus       231 WSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~  310 (361)
T 4f9c_A          231 WSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTS  310 (361)
T ss_dssp             HHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC-----------
T ss_pred             hhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhcccccccccccc
Confidence            999999999999999984322100                                                        


Q ss_pred             ----------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          144 ----------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       144 ----------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                .....+..+.+++.+||+.||++|||++|+++
T Consensus       311 ~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~  352 (361)
T 4f9c_A          311 DIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALL  352 (361)
T ss_dssp             -----------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             ccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence                      00012346789999999999999999999986

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=2.2e-39  Score=270.47  Aligned_cols=163  Identities=19%  Similarity=0.213  Sum_probs=138.7

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC---cc---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK---EE---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~---~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      ++.++|||||++++.   .+.+|+||||++||+|..++.+   ..         |++.||+|||+   .+|+||||||+|
T Consensus       246 l~~~~HP~IV~l~~~f~~~~~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~---~gIiHRDLKPeN  322 (689)
T 3v5w_A          246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPAN  322 (689)
T ss_dssp             HSSSCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGG
T ss_pred             HhhCCCCCEeEEEEEEEECCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHH
Confidence            356789999999998   8899999999999999999922   22         99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCC--
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFK--  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~--  141 (188)
                      ||++.+|.+||+|||+++....    ....+.+||+.|+|||       ++.++|+||+||++|+|++|..||.....  
T Consensus       323 ILld~~G~vKL~DFGlA~~~~~----~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~  398 (689)
T 3v5w_A          323 ILLDEHGHVRISDLGLACDFSK----KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD  398 (689)
T ss_dssp             EEECTTSCEEECCCTTCEECSS----CCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC
T ss_pred             eEEeCCCCEEecccceeeecCC----CCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH
Confidence            9999999999999999986431    1234578999999999       57889999999999999999999964322  


Q ss_pred             ------------CCcCHHHHHHHHHHHHHccCcCCCCCCC-----HHHHHH
Q 039565          142 ------------GEFDIISVEKAVEIAMASVSSKVNRRPL-----MNQVVM  175 (188)
Q Consensus       142 ------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~i~~  175 (188)
                                  ..++...+..+.+++..||+.||.+|++     +++|++
T Consensus       399 ~~~i~~~i~~~~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~  449 (689)
T 3v5w_A          399 KHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  449 (689)
T ss_dssp             HHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred             HHHHHHhhcCCCCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence                        1233445678999999999999999998     677765

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=2.4e-38  Score=263.05  Aligned_cols=164  Identities=21%  Similarity=0.259  Sum_probs=139.4

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      |++++|||||+++++   ....+++||||++|+|.+++ ++..            |++.||.|||+   .+|+||||||+
T Consensus       208 l~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~---~~iiHRDlKp~  284 (573)
T 3uto_A          208 MSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPE  284 (573)
T ss_dssp             HHHTCCTTBCCEEEEEECSSEEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGG
T ss_pred             HHhCCCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChh
Confidence            577899999999999   88999999999999999998 3332            99999999999   99999999999


Q ss_pred             cEEEccC--CceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC
Q 039565           70 NILLNEK--VQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK  141 (188)
Q Consensus        70 nill~~~--~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~  141 (188)
                      |||++.+  +.+||+|||+++...   .........||+.|+|||      ++.++||||+||++|+|++|..||.....
T Consensus       285 Nill~~~~~~~vKl~DFG~a~~~~---~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~  361 (573)
T 3uto_A          285 NIMFTTKRSNELKLIDFGLTAHLD---PKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND  361 (573)
T ss_dssp             GEEESSSSCCCEEECCCSSCEECC---TTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH
T ss_pred             hccccCCCCCCEEEeeccceeEcc---CCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH
Confidence            9999854  899999999998643   223345678999999999      67889999999999999999999954221


Q ss_pred             ---------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 ---------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 ---------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                     .......+..+.+++..||+.||.+|||++|+++
T Consensus       362 ~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~  410 (573)
T 3uto_A          362 DETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALE  410 (573)
T ss_dssp             HHHHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                           1111234678899999999999999999999987

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=6.9e-37  Score=237.65  Aligned_cols=175  Identities=34%  Similarity=0.466  Sum_probs=147.3

Q ss_pred             CcccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc------c---------cHHHHHHHHhcCCCCCcEEeC
Q 039565            5 NRNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE------E---------VCCPGLEYLHQGLKHPIIQRD   65 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~------~---------~i~~~l~~Lh~~~~~~i~h~d   65 (188)
                      .+.+++||||++++++   .+..++||||+++++|.+++ ...      .         |++.||.|||+   .+++|||
T Consensus        88 ~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~ivH~d  164 (321)
T 2qkw_B           88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRD  164 (321)
T ss_dssp             GGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSC
T ss_pred             HHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcC---CCeecCC
Confidence            3677899999999999   77889999999999999999 221      1         89999999999   9999999


Q ss_pred             CCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCcccccc
Q 039565           66 MKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLS  139 (188)
Q Consensus        66 l~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~  139 (188)
                      |||+||+++.++.+||+|||++................|+..|++||      ++.++|+||||+++|++++|..||...
T Consensus       165 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~  244 (321)
T 2qkw_B          165 VKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQS  244 (321)
T ss_dssp             CCSTTEEECTTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCS
T ss_pred             CCHHHEEECCCCCEEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCccccc
Confidence            99999999999999999999987543222222334456889999999      689999999999999999999887532


Q ss_pred             CC----------------------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          140 FK----------------------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       140 ~~----------------------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                      ..                            ...+...+..+.+++..||+.+|++|||++++++.|+.+..
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~  315 (321)
T 2qkw_B          245 LPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR  315 (321)
T ss_dssp             SSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence            21                            22456778899999999999999999999999999987654

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=6.3e-37  Score=238.11  Aligned_cols=174  Identities=31%  Similarity=0.479  Sum_probs=146.8

Q ss_pred             CcccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc------c---------cHHHHHHHHhcCCCC---CcE
Q 039565            5 NRNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE------E---------VCCPGLEYLHQGLKH---PII   62 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~------~---------~i~~~l~~Lh~~~~~---~i~   62 (188)
                      .+.+++||||++++++   ....++||||+++|+|.+++ ...      .         |++.||.|||+   .   +++
T Consensus        80 ~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~~~iv  156 (326)
T 3uim_A           80 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHD---HCDPKII  156 (326)
T ss_dssp             GGGTCCCTTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHH---SSSSCEE
T ss_pred             HHHhccCCCccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCeE
Confidence            3577899999999999   77889999999999999999 221      1         89999999999   7   999


Q ss_pred             EeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccc
Q 039565           63 QRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTV  136 (188)
Q Consensus        63 h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~  136 (188)
                      ||||||+||+++.++.++|+|||++.... ...........|++.|+|||      ++.++|+||||+++|+|++|..||
T Consensus       157 H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf  235 (326)
T 3uim_A          157 HRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF  235 (326)
T ss_dssp             CCCCSGGGEEECTTCCEEECCCSSCEECC-SSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSB
T ss_pred             eCCCchhhEEECCCCCEEeccCccccccC-cccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcc
Confidence            99999999999999999999999998653 22222334456899999999      588999999999999999999998


Q ss_pred             cc------------------------------cCCCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          137 DL------------------------------SFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       137 ~~------------------------------~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                      +.                              ......+...+..+.+++..||+.+|.+|||+++++++|++..-
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~  311 (326)
T 3uim_A          236 DLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGL  311 (326)
T ss_dssp             CHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSC
T ss_pred             cccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcch
Confidence            41                              11123456778899999999999999999999999999986543

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=1.9e-37  Score=241.18  Aligned_cols=175  Identities=20%  Similarity=0.201  Sum_probs=141.4

Q ss_pred             CcccccCCCeeeeccc---C----CccEEEEecCCCCChhhhcC--Ccc---------cHHHHHHHHhcCCCC-------
Q 039565            5 NRNKLTGPLLVELIGK---Q----KNNALELGFRGNPELVDQQG--KEE---------VCCPGLEYLHQGLKH-------   59 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~---~----~~~~lv~e~~~~~~L~~~~~--~~~---------~i~~~l~~Lh~~~~~-------   59 (188)
                      .+.+++||||++++++   .    ...++||||+++|+|.+++.  ...         |++.||.|||+   .       
T Consensus        71 ~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~---~~~~l~~~  147 (322)
T 3soc_A           71 SLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHE---DIPGLKDG  147 (322)
T ss_dssp             TSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTC---CEEEETTE
T ss_pred             HHhcCCCCCchhhcceeccCCCCCceEEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHh---hccccccc
Confidence            3678899999999999   2    23699999999999999992  222         99999999998   7       


Q ss_pred             ---CcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCCC-----------CCccchHHHHHH
Q 039565           60 ---PIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTEL-----------TEKSDVDSFEIV  125 (188)
Q Consensus        60 ---~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~-----------~~~~di~s~G~~  125 (188)
                         +++||||||+||+++.++.+||+|||+++...............|++.|+|||.           +.++||||||++
T Consensus       148 ~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~i  227 (322)
T 3soc_A          148 HKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLV  227 (322)
T ss_dssp             EECEEECSCCSGGGEEECTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEeCCCChHhEEECCCCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHH
Confidence               999999999999999999999999999976543332223334678999999992           235699999999


Q ss_pred             HHHHHhCCccccccCCCC----------------------------------cCHHHHHHHHHHHHHccCcCCCCCCCHH
Q 039565          126 ILEIITGILTVDLSFKGE----------------------------------FDIISVEKAVEIAMASVSSKVNRRPLMN  171 (188)
Q Consensus       126 l~~~~~g~~p~~~~~~~~----------------------------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~  171 (188)
                      +|+|++|..||+......                                  .....+..+.+++..||+.||++|||++
T Consensus       228 l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~  307 (322)
T 3soc_A          228 LWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAG  307 (322)
T ss_dssp             HHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHH
Confidence            999999998886432211                                  0113345699999999999999999999


Q ss_pred             HHHHHHhhccC
Q 039565          172 QVVMVREQGSG  182 (188)
Q Consensus       172 ~i~~~l~~~~~  182 (188)
                      ++++.|+++.+
T Consensus       308 ell~~L~~l~~  318 (322)
T 3soc_A          308 CVGERITQMQR  318 (322)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999998764

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=4.7e-37  Score=237.87  Aligned_cols=173  Identities=24%  Similarity=0.316  Sum_probs=136.9

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc-----c---------cHHHHHHHHhcCCCCC--cEEeC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE-----E---------VCCPGLEYLHQGLKHP--IIQRD   65 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~-----~---------~i~~~l~~Lh~~~~~~--i~h~d   65 (188)
                      +.+++||||++++++   ....++||||+++++|.+++ ...     .         |++.||+|||+   .+  ++|||
T Consensus        88 l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~~~ivH~D  164 (309)
T 3p86_A           88 MKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN---RNPPIVHRN  164 (309)
T ss_dssp             HHHCCCTTBCCEEEEECSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHT---SSSCCCCTT
T ss_pred             HHhCCCCCEeeEEEEEEECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCCEECCC
Confidence            567899999999999   77889999999999999999 322     1         99999999999   88  99999


Q ss_pred             CCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCcccccc
Q 039565           66 MKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLS  139 (188)
Q Consensus        66 l~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~  139 (188)
                      |||+||+++.++.+||+|||+++...  ..........|++.|+|||      ++.++|+||||+++|++++|..||...
T Consensus       165 ikp~NIll~~~~~~kL~Dfg~a~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~  242 (309)
T 3p86_A          165 LKSPNLLVDKKYTVKVCDFGLSRLKA--STFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL  242 (309)
T ss_dssp             CCGGGEEECTTCCEEECCCC-------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTS
T ss_pred             CChhhEEEeCCCcEEECCCCCCcccc--ccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            99999999999999999999987532  1112233467889999998      688999999999999999999998643


Q ss_pred             C-------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          140 F-------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       140 ~-------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                      .             ....+...+..+.+++..||+.+|.+|||++++++.|+.+..+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~  299 (309)
T 3p86_A          243 NPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS  299 (309)
T ss_dssp             CHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred             CHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            2             1223444567899999999999999999999999999887654

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=5.5e-37  Score=238.75  Aligned_cols=174  Identities=20%  Similarity=0.267  Sum_probs=142.1

Q ss_pred             cccccCCCeeeeccc--CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++  ....++|+||+.+|+|.+++ ....            |++.||.|||+   .+++||||||+|
T Consensus        69 l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~N  145 (325)
T 3kex_A           69 IGSLDHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEE---HGMVHRNLAARN  145 (325)
T ss_dssp             HHTCCCTTBCCEEEEECBSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHH---TTCCCSCCSSTT
T ss_pred             HhcCCCCCcCeEEEEEcCCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHh---CCCCCCccchhe
Confidence            456799999999999  77899999999999999999 3222            99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCCCC
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFKGE  143 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~~~  143 (188)
                      |+++.++.+||+|||+++...............++..|++||      ++.++|+||||+++|++++ |..||......+
T Consensus       146 il~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~  225 (325)
T 3kex_A          146 VLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE  225 (325)
T ss_dssp             EEESSSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH
T ss_pred             EEECCCCeEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH
Confidence            999999999999999998654333333334456777899998      6889999999999999999 999986533211


Q ss_pred             ------------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          144 ------------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       144 ------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                                  .+...+..+.+++..||+.+|.+|||++++++.|+.+..
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~  276 (325)
T 3kex_A          226 VPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR  276 (325)
T ss_dssp             HHHHHHTTCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred             HHHHHHcCCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence                        222334567899999999999999999999999988754

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=3e-36  Score=232.40  Aligned_cols=174  Identities=35%  Similarity=0.489  Sum_probs=145.7

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-c-----c---------cHHHHHHHHhcCCCCCcEEeCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-E-----E---------VCCPGLEYLHQGLKHPIIQRDMK   67 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~-----~---------~i~~~l~~Lh~~~~~~i~h~dl~   67 (188)
                      +.+++||||++++++   .+..+++|||+++++|.+++.. .     .         |++.||.|||+   .+++|+|||
T Consensus        84 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlk  160 (307)
T 2nru_A           84 MAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIK  160 (307)
T ss_dssp             HHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCC
T ss_pred             HHhcCCCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecCCCC
Confidence            567899999999999   7789999999999999999821 1     1         89999999999   999999999


Q ss_pred             CCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-----CCCccchHHHHHHHHHHHhCCccccccCCC
Q 039565           68 STNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-----LTEKSDVDSFEIVILEIITGILTVDLSFKG  142 (188)
Q Consensus        68 ~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-----~~~~~di~s~G~~l~~~~~g~~p~~~~~~~  142 (188)
                      |+||+++.++.++|+|||++................|++.|++||     ++.++|+||||+++|++++|..||+.....
T Consensus       161 p~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~  240 (307)
T 2nru_A          161 SANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP  240 (307)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBSS
T ss_pred             HHHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcch
Confidence            999999999999999999987543222222233457889999998     588999999999999999999998653221


Q ss_pred             --------------------------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          143 --------------------------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       143 --------------------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                                                ..+...+..+.+++..||+.+|.+|||++++++.|+++..
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~  306 (307)
T 2nru_A          241 QLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA  306 (307)
T ss_dssp             SBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence                                      1234566789999999999999999999999999998764

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=8.9e-37  Score=235.86  Aligned_cols=174  Identities=24%  Similarity=0.260  Sum_probs=141.7

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC--cc-----------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK--EE-----------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~--~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||++++++   ....++||||+++++|.+++..  ..           |++.||+|||+   .+++|+||||+
T Consensus        61 l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~  137 (310)
T 3s95_A           61 MRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSH  137 (310)
T ss_dssp             HTTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSTT
T ss_pred             HHhCCCcCcccEEEEEecCCeeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCcC
Confidence            567899999999999   7889999999999999999922  21           99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCc------------ceeeecccccccCCC------CCCccchHHHHHHHHHHHh
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTH------------MSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT  131 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~------------~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~  131 (188)
                      ||+++.++.+||+|||++..........            ......|++.|+|||      ++.++||||||+++|++++
T Consensus       138 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~  217 (310)
T 3s95_A          138 NCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIG  217 (310)
T ss_dssp             SEEECTTSCEEECCCTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred             eEEECCCCCEEEeecccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhc
Confidence            9999999999999999987543211110            111457889999999      6889999999999999999


Q ss_pred             CCccccccCCCC--------------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          132 GILTVDLSFKGE--------------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       132 g~~p~~~~~~~~--------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                      |..|+.......              .+...+..+.+++..||+.+|++|||++++++.|+.+..
T Consensus       218 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~  282 (310)
T 3s95_A          218 RVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRM  282 (310)
T ss_dssp             TCCSSTTTSCBCTTSSBCHHHHHHHTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCcchhhhHHHHhhhhhccccccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            998876533221              122234568899999999999999999999999987753

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=5.7e-37  Score=242.89  Aligned_cols=174  Identities=20%  Similarity=0.207  Sum_probs=143.2

Q ss_pred             cccc-cCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc------------------c---------cHHHHHHHH
Q 039565            6 RNKL-TGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE------------------E---------VCCPGLEYL   53 (188)
Q Consensus         6 l~~l-~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~------------------~---------~i~~~l~~L   53 (188)
                      +.++ +||||++++++   .+..++||||+++|+|.+++ ...                  .         |++.||.||
T Consensus       140 l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L  219 (370)
T 2psq_A          140 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL  219 (370)
T ss_dssp             HHHSCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhcCCCCEeeEEEEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHH
Confidence            3456 89999999999   77899999999999999998 211                  1         999999999


Q ss_pred             hcCCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHH
Q 039565           54 HQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVIL  127 (188)
Q Consensus        54 h~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~  127 (188)
                      |+   .+++||||||+||+++.++.+||+|||+++...............+++.|+|||      ++.++|+||||+++|
T Consensus       220 H~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~  296 (370)
T 2psq_A          220 AS---QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMW  296 (370)
T ss_dssp             HH---TTEECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHH
T ss_pred             Hh---CCeeccccchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHH
Confidence            99   999999999999999999999999999987543222222233345677899999      688999999999999


Q ss_pred             HHHh-CCccccccCC------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          128 EIIT-GILTVDLSFK------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       128 ~~~~-g~~p~~~~~~------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                      +|++ |..||.....            ...+...+..+.+++..||+.+|.+|||++++++.|+.+..
T Consensus       297 ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~  364 (370)
T 2psq_A          297 EIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT  364 (370)
T ss_dssp             HHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            9999 8888864321            22334456689999999999999999999999999988653

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=2.1e-37  Score=245.82  Aligned_cols=175  Identities=19%  Similarity=0.208  Sum_probs=141.4

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC----cc---------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK----EE---------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~----~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      |++++||||++++++   .+..++||||+++|+|.+++..    ..         |++.||+|||+   .+++||||||+
T Consensus       166 l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~  242 (377)
T 3cbl_A          166 LKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAAR  242 (377)
T ss_dssp             HTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGG
T ss_pred             HHhCCCCCEEEEEEEEecCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCcCCcccCHH
Confidence            567899999999999   6788999999999999999822    11         99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccC--
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSF--  140 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~--  140 (188)
                      ||+++.++.+||+|||+++...............++..|+|||      ++.++|+||||+++|++++ |..||....  
T Consensus       243 Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~  322 (377)
T 3cbl_A          243 NCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ  322 (377)
T ss_dssp             GEEECTTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH
T ss_pred             HEEEcCCCcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence            9999999999999999987532110000111123456799999      5789999999999999998 888885421  


Q ss_pred             ----------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          141 ----------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       141 ----------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                                ....+...+..+.+++..||+.+|++|||+++|++.|+.+...
T Consensus       323 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~  375 (377)
T 3cbl_A          323 QTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR  375 (377)
T ss_dssp             HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence                      1223344567889999999999999999999999999987643

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=2.1e-36  Score=232.94  Aligned_cols=165  Identities=22%  Similarity=0.276  Sum_probs=139.4

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC--cc---------cHHHHHHHHhcCCCCCcEEeCCCCCcE
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK--EE---------VCCPGLEYLHQGLKHPIIQRDMKSTNI   71 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~--~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~ni   71 (188)
                      +.+++||||++++++   .+..++||||+++++|.+++.+  ..         |++.||.|||+   .+++|||+||+||
T Consensus        71 l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Ni  147 (297)
T 3fxz_A           71 MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNI  147 (297)
T ss_dssp             HHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGE
T ss_pred             HhcCCCCCCCeEeEEEEECCEEEEEEECCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHE
Confidence            467899999999998   7889999999999999999822  22         99999999999   9999999999999


Q ss_pred             EEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC-----
Q 039565           72 LLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF-----  140 (188)
Q Consensus        72 ll~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~-----  140 (188)
                      +++.++.+||+|||++......  ........|++.|+|||      ++.++|+||||+++|+|++|..||....     
T Consensus       148 l~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~  225 (297)
T 3fxz_A          148 LLGMDGSVKLTDFGFCAQITPE--QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL  225 (297)
T ss_dssp             EECTTCCEEECCCTTCEECCST--TCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH
T ss_pred             EECCCCCEEEeeCCCceecCCc--ccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            9999999999999998754322  22334567899999999      6889999999999999999999985432     


Q ss_pred             ---------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          141 ---------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       141 ---------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                               ....+...+..+.+++..||+.||++|||++++++
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  269 (297)
T 3fxz_A          226 YLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ  269 (297)
T ss_dssp             HHHHHHCSCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHhCCCCCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence                     11223445677899999999999999999999987

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=5.5e-37  Score=239.04  Aligned_cols=174  Identities=19%  Similarity=0.249  Sum_probs=142.5

Q ss_pred             cccccCCCeeeeccc--CCccEEEEecCCCCChhhhc-C-Ccc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQ-G-KEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~-~-~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++  ....++++||+.+|+|.+++ . ...           |++.||.|||+   .+++||||||+|
T Consensus        71 l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~N  147 (327)
T 3poz_A           71 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARN  147 (327)
T ss_dssp             HHHCCBTTBCCEEEEEESSSEEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGG
T ss_pred             HHhCCCCCEeEEEEEEecCCeEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCChhe
Confidence            567899999999999  67788999999999999998 2 221           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCC--
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFK--  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~--  141 (188)
                      |+++.++.+||+|||+++...............++..|++||      ++.++|+||||+++|++++ |..||+....  
T Consensus       148 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~  227 (327)
T 3poz_A          148 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE  227 (327)
T ss_dssp             EEEEETTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG
T ss_pred             EEECCCCCEEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH
Confidence            999999999999999988654333322333455677899999      6889999999999999999 9999864322  


Q ss_pred             ----------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          142 ----------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       142 ----------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                                ...+...+..+.+++..||+.+|.+|||++++++.|+.+..
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~  278 (327)
T 3poz_A          228 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             HHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred             HHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence                      12334456689999999999999999999999999987754

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=1.3e-36  Score=236.77  Aligned_cols=175  Identities=19%  Similarity=0.236  Sum_probs=142.0

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||++++++   ....++||||+++++|.+++ ....            |++.||.|||+   .+++||||||+
T Consensus       104 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~  180 (325)
T 3kul_A          104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD---LGYVHRDLAAR  180 (325)
T ss_dssp             HTTCCCTTBCCEEEEECGGGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGG
T ss_pred             HHhCCCCCCCcEEEEEEeCCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcc
Confidence            567899999999999   77889999999999999999 3322            99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCC-cceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccC-
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGT-HMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSF-  140 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~-  140 (188)
                      ||+++.++.++|+|||+++........ .......++..|++||      ++.++||||||+++|++++ |..||.... 
T Consensus       181 NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~  260 (325)
T 3kul_A          181 NVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN  260 (325)
T ss_dssp             GEEECTTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCH
T ss_pred             eEEECCCCCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCH
Confidence            999999999999999999865322111 1122334566799998      5889999999999999998 999885321 


Q ss_pred             -----------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          141 -----------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       141 -----------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                                 ....+...+..+.+++..||+.+|++|||+++|++.|+.+...
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~  314 (325)
T 3kul_A          261 RDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS  314 (325)
T ss_dssp             HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHcCCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence                       1223344567899999999999999999999999999987654

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=2.1e-36  Score=231.72  Aligned_cols=174  Identities=24%  Similarity=0.344  Sum_probs=135.8

Q ss_pred             cccccCCCeeeeccc--CCccEEEEecCCCCChhhhcC-Ccc------------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQG-KEE------------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~~-~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++  ....+++|||+++++|.+++. ...            |++.||.|||+   .+++|+||||+|
T Consensus        74 l~~l~h~~iv~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~Dlkp~N  150 (289)
T 3og7_A           74 LRKTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNN  150 (289)
T ss_dssp             HTTCCCTTBCCEEEEECSSSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGG
T ss_pred             HHhCCCCcEEEEEeeccCCccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh---CCcccccCccce
Confidence            567899999999999  778899999999999999983 222            99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC---------CCCccchHHHHHHHHHHHhCCccccccCC
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE---------LTEKSDVDSFEIVILEIITGILTVDLSFK  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe---------~~~~~di~s~G~~l~~~~~g~~p~~~~~~  141 (188)
                      |+++.++.++|+|||++................|++.|++||         ++.++|+||||+++|++++|..||.....
T Consensus       151 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~  230 (289)
T 3og7_A          151 IFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINN  230 (289)
T ss_dssp             EEEETTTEEEECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCC
T ss_pred             EEECCCCCEEEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccch
Confidence            999999999999999987543222222334467889999998         34589999999999999999999864221


Q ss_pred             -----------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          142 -----------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       142 -----------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                                       .......+..+.+++..||+.+|.+|||++++++.|+++..
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~  288 (289)
T 3og7_A          231 RDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR  288 (289)
T ss_dssp             HHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             HHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence                             11223456789999999999999999999999999998764

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=3e-36  Score=228.27  Aligned_cols=175  Identities=23%  Similarity=0.305  Sum_probs=142.8

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC----cc---------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK----EE---------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~----~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||++++++   ....+++|||+++++|.+++..    ..         |++.||.|||+   .+++|+|+||+
T Consensus        57 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~  133 (268)
T 3sxs_A           57 MMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLES---HQFIHRDLAAR  133 (268)
T ss_dssp             HHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCSGG
T ss_pred             HHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCcc
Confidence            567899999999999   6778999999999999999822    11         99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCC-
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFK-  141 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~-  141 (188)
                      ||+++.++.++|+|||.+.... ...........++..|++||      ++.++|+||||+++|++++ |..||+.... 
T Consensus       134 Nil~~~~~~~~l~Dfg~~~~~~-~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~  212 (268)
T 3sxs_A          134 NCLVDRDLCVKVSDFGMTRYVL-DDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS  212 (268)
T ss_dssp             GEEECTTCCEEECCTTCEEECC-TTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH
T ss_pred             eEEECCCCCEEEccCccceecc-hhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH
Confidence            9999999999999999987543 12212222344566799998      5889999999999999998 9999864221 


Q ss_pred             -----------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCcc
Q 039565          142 -----------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGSR  184 (188)
Q Consensus       142 -----------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~~  184 (188)
                                 ...+...+..+.+++..||+.+|.+|||++++++.|+.+.++.
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~  266 (268)
T 3sxs_A          213 EVVLKVSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD  266 (268)
T ss_dssp             HHHHHHHTTCCCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred             HHHHHHHcCCCCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence                       1122334567899999999999999999999999999987753

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=1.2e-36  Score=239.20  Aligned_cols=175  Identities=21%  Similarity=0.190  Sum_probs=143.1

Q ss_pred             cccc-cCCCeeeeccc----CCccEEEEecCCCCChhhhc-CC-------------------------------------
Q 039565            6 RNKL-TGPLLVELIGK----QKNNALELGFRGNPELVDQQ-GK-------------------------------------   42 (188)
Q Consensus         6 l~~l-~Hpniv~~~~~----~~~~~lv~e~~~~~~L~~~~-~~-------------------------------------   42 (188)
                      +.++ +||||++++++    +...+++|||+++|+|.+++ ..                                     
T Consensus        79 l~~l~~hpniv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (359)
T 3vhe_A           79 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITS  158 (359)
T ss_dssp             HHHHCCCTTBCCEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------
T ss_pred             HHhhcCCcceeeeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCc
Confidence            3455 79999999998    44589999999999999998 22                                     


Q ss_pred             -------------------------------cc---------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEccCCceEEe
Q 039565           43 -------------------------------EE---------VCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLA   82 (188)
Q Consensus        43 -------------------------------~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~~~kl~   82 (188)
                                                     ..         |++.||.|||+   .+++||||||+||+++.++.+||+
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~  235 (359)
T 3vhe_A          159 SQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKIC  235 (359)
T ss_dssp             -------------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEEC
T ss_pred             cccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCcEEEE
Confidence                                           11         89999999999   999999999999999999999999


Q ss_pred             cccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCC-------------C
Q 039565           83 DFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFK-------------G  142 (188)
Q Consensus        83 d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~-------------~  142 (188)
                      |||++................++..|+|||      ++.++||||||+++|+|++ |..||.....             .
T Consensus       236 Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~  315 (359)
T 3vhe_A          236 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM  315 (359)
T ss_dssp             CCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCC
T ss_pred             eccceeeecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCC
Confidence            999997653233323334466788899999      6889999999999999998 9999865332             1


Q ss_pred             CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          143 EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       143 ~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                      ..+...+..+.+++..||+.+|.+|||++++++.|+.+...
T Consensus       316 ~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~  356 (359)
T 3vhe_A          316 RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  356 (359)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence            23334556899999999999999999999999999987643

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=1.8e-36  Score=245.67  Aligned_cols=173  Identities=22%  Similarity=0.258  Sum_probs=143.3

Q ss_pred             cccccCCCeeeeccc----CCccEEEEecCCCCChhhhcC---C--cc---------cHHHHHHHHhcCCCCCcEEeCCC
Q 039565            6 RNKLTGPLLVELIGK----QKNNALELGFRGNPELVDQQG---K--EE---------VCCPGLEYLHQGLKHPIIQRDMK   67 (188)
Q Consensus         6 l~~l~Hpniv~~~~~----~~~~~lv~e~~~~~~L~~~~~---~--~~---------~i~~~l~~Lh~~~~~~i~h~dl~   67 (188)
                      |.+++||||++++++    ....++||||+++|+|.+++.   .  ..         |++.||+|||+   .+++|||||
T Consensus       240 l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlk  316 (450)
T 1k9a_A          240 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLA  316 (450)
T ss_dssp             HHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCC
T ss_pred             HHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCC
Confidence            567899999999998    347899999999999999992   1  12         99999999999   999999999


Q ss_pred             CCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccC
Q 039565           68 STNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSF  140 (188)
Q Consensus        68 ~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~  140 (188)
                      |+||+++.++.+||+|||+++....     ......++..|+|||      ++.++|+||||+++|+|++ |..||....
T Consensus       317 p~Nill~~~~~~kl~DfG~a~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~  391 (450)
T 1k9a_A          317 ARNVLVSEDNVAKVSDFGLTKEASS-----TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP  391 (450)
T ss_dssp             GGGEEECTTSCEEECCCTTCEECC-----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSC
T ss_pred             HhhEEECCCCCEEEeeCCCcccccc-----cccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence            9999999999999999999874321     112235667899998      6889999999999999998 999986432


Q ss_pred             CC------------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCccee
Q 039565          141 KG------------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGSRIT  186 (188)
Q Consensus       141 ~~------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~~~~  186 (188)
                      ..            ..+...+..+.+++..||+.+|++|||+.++++.|+.+...++.
T Consensus       392 ~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~~l~  449 (450)
T 1k9a_A          392 LKDVVPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHELH  449 (450)
T ss_dssp             TTTHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTTTT
T ss_pred             HHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHhhcc
Confidence            21            23344567899999999999999999999999999998877654

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=1.7e-36  Score=246.01  Aligned_cols=174  Identities=23%  Similarity=0.269  Sum_probs=143.4

Q ss_pred             cccccCCCeeeeccc--CCccEEEEecCCCCChhhhcCCc-----c---------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQGKE-----E---------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~~~~-----~---------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      |.+++||||++++++  .+..++||||+++|+|.+++...     .         |++.||+|||+   .+++||||||+
T Consensus       237 l~~l~h~~iv~l~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~  313 (454)
T 1qcf_A          237 MKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAA  313 (454)
T ss_dssp             HTTCCCTTBCCEEEEECSSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGG
T ss_pred             HhhCCCCCEeeEEEEEeCCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHH
Confidence            567899999999999  78899999999999999999321     1         99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccC--
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSF--  140 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~--  140 (188)
                      ||+++.++.+||+|||+++.... ..........++..|+|||      ++.++||||||+++|+|++ |..||....  
T Consensus       314 Nill~~~~~~kl~DFG~a~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~  392 (454)
T 1qcf_A          314 NILVSASLVCKIADFGLARVIED-NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP  392 (454)
T ss_dssp             GEEECTTCCEEECSTTGGGGBCC-HHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH
T ss_pred             HEEECCCCcEEEeeCCCceEcCC-CceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH
Confidence            99999999999999999875421 1111112234566799998      6889999999999999999 999985421  


Q ss_pred             ----------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          141 ----------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       141 ----------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                                ....+...+..+.+++..||+.+|++|||+++|++.|+.+...
T Consensus       393 ~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~  445 (454)
T 1qcf_A          393 EVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA  445 (454)
T ss_dssp             HHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred             HHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence                      1222334567899999999999999999999999999988654

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=3.5e-36  Score=232.40  Aligned_cols=175  Identities=21%  Similarity=0.242  Sum_probs=145.0

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-C-Cc-------------------------c---------cH
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-G-KE-------------------------E---------VC   46 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~-~~-------------------------~---------~i   46 (188)
                      +.+++||||++++++   ....+++|||+++++|.+++ . ..                         .         |+
T Consensus        80 l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi  159 (314)
T 2ivs_A           80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQI  159 (314)
T ss_dssp             HTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHH
T ss_pred             HhhCCCCceeeEEEEEecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHH
Confidence            567899999999998   77899999999999999998 2 11                         1         99


Q ss_pred             HHHHHHHhcCCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchH
Q 039565           47 CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVD  120 (188)
Q Consensus        47 ~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~  120 (188)
                      +.||.|||+   .+++|+||||+||+++.++.++|+|||++................++..|++||      ++.++|+|
T Consensus       160 ~~~l~~lH~---~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  236 (314)
T 2ivs_A          160 SQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVW  236 (314)
T ss_dssp             HHHHHHHHH---TTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHH
T ss_pred             HHHHHHHHH---CCCcccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHH
Confidence            999999999   999999999999999999999999999987543222222233345677899999      68899999


Q ss_pred             HHHHHHHHHHh-CCccccccCC------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          121 SFEIVILEIIT-GILTVDLSFK------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       121 s~G~~l~~~~~-g~~p~~~~~~------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                      |||+++|+|++ |..||.....            ...+...+..+.+++..||+.+|++|||++++++.|+++...
T Consensus       237 slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~  312 (314)
T 2ivs_A          237 SFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK  312 (314)
T ss_dssp             HHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhCCCCCCCCCCHHHHHHHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence            99999999999 9888864322            223334567899999999999999999999999999987654

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=1.7e-36  Score=229.84  Aligned_cols=175  Identities=24%  Similarity=0.312  Sum_probs=143.1

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||++++++   ....+++|||+++++|.+++ ....            |++.||.|||+   .+++|+|+||+
T Consensus        59 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~  135 (269)
T 4hcu_A           59 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAAR  135 (269)
T ss_dssp             HHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGG
T ss_pred             HHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHh---CCeecCCcchh
Confidence            567899999999999   67789999999999999999 3322            99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccC--
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSF--  140 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~--  140 (188)
                      ||+++.++.++|+|||++.... ...........++..|++||      ++.++|+||+|+++|++++ |..||....  
T Consensus       136 Nil~~~~~~~kl~Dfg~~~~~~-~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~  214 (269)
T 4hcu_A          136 NCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS  214 (269)
T ss_dssp             GEEECGGGCEEECCTTGGGGBC-CHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH
T ss_pred             eEEEcCCCCEEecccccccccc-ccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH
Confidence            9999999999999999987542 11111122344566799998      6889999999999999999 888886432  


Q ss_pred             ----------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCcc
Q 039565          141 ----------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGSR  184 (188)
Q Consensus       141 ----------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~~  184 (188)
                                ....+...+..+.+++..||+.+|++|||++++++.|+++.++.
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~g  268 (269)
T 4hcu_A          215 EVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAESG  268 (269)
T ss_dssp             HHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred             HHHHHHhcCccCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHcc
Confidence                      12223334677899999999999999999999999999887654

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=4.7e-36  Score=234.16  Aligned_cols=164  Identities=21%  Similarity=0.309  Sum_probs=138.3

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-C--Ccc---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-G--KEE---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~--~~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +++++||||++++++   .+..++||||+++++|.+++ .  ...         |++.||.|||+   .+++||||||+|
T Consensus        68 l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~N  144 (328)
T 3fe3_A           68 MKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAEN  144 (328)
T ss_dssp             HHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGG
T ss_pred             HHhCCCCCEeeEEEEEEECCEEEEEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCCHHH
Confidence            567899999999999   78899999999999999998 2  222         99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------C-CCccchHHHHHHHHHHHhCCccccccCC--
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------L-TEKSDVDSFEIVILEIITGILTVDLSFK--  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~-~~~~di~s~G~~l~~~~~g~~p~~~~~~--  141 (188)
                      |+++.++.+||+|||++......   .......|++.|+|||      + +.++|+||+|+++|+|++|..||+....  
T Consensus       145 Ill~~~~~~kl~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~  221 (328)
T 3fe3_A          145 LLLDADMNIKIADFGFSNEFTVG---GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE  221 (328)
T ss_dssp             EEECTTSCEEECSTTCCGGGSSS---CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             EEEcCCCCEEEeeccCceecCCC---CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHH
Confidence            99999999999999998754321   2234567899999999      2 4689999999999999999999965431  


Q ss_pred             ---------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 ---------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 ---------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                               ...+...+..+.+++..||+.||.+|||++++++
T Consensus       222 ~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~  264 (328)
T 3fe3_A          222 LRERVLRGKYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMK  264 (328)
T ss_dssp             HHHHHHHCCCCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence                     1223334667889999999999999999999987

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=1.9e-35  Score=227.08  Aligned_cols=170  Identities=18%  Similarity=0.191  Sum_probs=137.6

Q ss_pred             cccCCCeeeeccc-------CCccEEEEecCCCCChhhhcCCcc-----------cHHHHHHHHh--------cCCCCCc
Q 039565            8 KLTGPLLVELIGK-------QKNNALELGFRGNPELVDQQGKEE-----------VCCPGLEYLH--------QGLKHPI   61 (188)
Q Consensus         8 ~l~Hpniv~~~~~-------~~~~~lv~e~~~~~~L~~~~~~~~-----------~i~~~l~~Lh--------~~~~~~i   61 (188)
                      .++||||++++++       ....+++|||+++|+|.++++...           |++.||.|||        +   .++
T Consensus        58 ~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~i  134 (301)
T 3q4u_A           58 MLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGK---PAI  134 (301)
T ss_dssp             CCCCTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCB---CEE
T ss_pred             hccCcCeeeEEEeeccccCCCceeEEehhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCC---CCe
Confidence            3799999999987       345789999999999999994333           9999999999        7   899


Q ss_pred             EEeCCCCCcEEEccCCceEEecccCcccccCCCCCc--ceeeecccccccCCCC------------CCccchHHHHHHHH
Q 039565           62 IQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTH--MSTTIAGTAGFLNTEL------------TEKSDVDSFEIVIL  127 (188)
Q Consensus        62 ~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~--~~~~~~~~~~~~~pe~------------~~~~di~s~G~~l~  127 (188)
                      +||||||+||+++.++.+||+|||+++.........  ......|++.|+|||.            +.++|+||||+++|
T Consensus       135 vH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~  214 (301)
T 3q4u_A          135 AHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLW  214 (301)
T ss_dssp             ECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHH
T ss_pred             ecCCCChHhEEEcCCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHH
Confidence            999999999999999999999999987543222111  1223478999999991            14799999999999


Q ss_pred             HHHhC----------CccccccCCCC-----------------------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHH
Q 039565          128 EIITG----------ILTVDLSFKGE-----------------------FDIISVEKAVEIAMASVSSKVNRRPLMNQVV  174 (188)
Q Consensus       128 ~~~~g----------~~p~~~~~~~~-----------------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~  174 (188)
                      +|++|          ..||.......                       .+...+..+.+++..||+.+|++|||+++++
T Consensus       215 el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~  294 (301)
T 3q4u_A          215 EVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIK  294 (301)
T ss_dssp             HHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred             HHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHH
Confidence            99999          66774322111                       1234667899999999999999999999999


Q ss_pred             HHHhhc
Q 039565          175 MVREQG  180 (188)
Q Consensus       175 ~~l~~~  180 (188)
                      +.|+++
T Consensus       295 ~~L~~i  300 (301)
T 3q4u_A          295 KTLTKI  300 (301)
T ss_dssp             HHHHHH
T ss_pred             HHHhcc
Confidence            999875

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=1.8e-36  Score=232.50  Aligned_cols=175  Identities=22%  Similarity=0.296  Sum_probs=138.2

Q ss_pred             cccccCCCeeeeccc-----CCccEEEEecCCCCChhhhc-CCc---c---------cHHHHHHHHhcCCCCCcEEeCCC
Q 039565            6 RNKLTGPLLVELIGK-----QKNNALELGFRGNPELVDQQ-GKE---E---------VCCPGLEYLHQGLKHPIIQRDMK   67 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-----~~~~~lv~e~~~~~~L~~~~-~~~---~---------~i~~~l~~Lh~~~~~~i~h~dl~   67 (188)
                      +.+++||||++++++     ....++||||+++++|.+++ ...   .         |++.||.|||+   .+++|+|||
T Consensus        65 l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dik  141 (295)
T 3ugc_A           65 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLA  141 (295)
T ss_dssp             HHTCCCTTBCCEEEEECHHHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCS
T ss_pred             HHhCCCCCEeeEEEEEecCCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCCC
Confidence            567899999999997     46689999999999999999 222   1         99999999999   999999999


Q ss_pred             CCcEEEccCCceEEecccCcccccCCCCC-cceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           68 STNILLNEKVQAKLADFGQSRISPVEGGT-HMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        68 ~~nill~~~~~~kl~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      |+||+++.++.+||+|||++......... .......++..|+|||      ++.++||||||+++|++++|..|+....
T Consensus       142 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~  221 (295)
T 3ugc_A          142 TRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP  221 (295)
T ss_dssp             GGGEEEEETTEEEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHH
T ss_pred             HhhEEEcCCCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCCh
Confidence            99999999999999999998764322111 1122344666799998      6889999999999999999987764211


Q ss_pred             ----------------------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          141 ----------------------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       141 ----------------------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                                                  ....+...+..+.+++..||+.+|++|||++++++.|+.+.++
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~  292 (295)
T 3ugc_A          222 AEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN  292 (295)
T ss_dssp             HHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHhhhcCccccchhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence                                        1112334457899999999999999999999999999987643

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=1.8e-36  Score=231.18  Aligned_cols=174  Identities=19%  Similarity=0.201  Sum_probs=134.1

Q ss_pred             cccccCCCeeeeccc--CCccEEEEecCCCCChhhhc-CCc-c-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQ-GKE-E-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~-~~~-~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++  .+..++||||+++++|.+++ .+. .           |++.||.|||+   .+++|+||||+|
T Consensus        70 l~~l~h~~iv~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~N  146 (281)
T 1mp8_A           70 MRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARN  146 (281)
T ss_dssp             HHTCCCTTBCCEEEEECSSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGG
T ss_pred             HHhCCCCccceEEEEEccCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHH
Confidence            567899999999999  77889999999999999998 222 1           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCC--
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFK--  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~--  141 (188)
                      |+++.++.+||+|||++..... ..........+++.|++||      ++.++|+||||+++|++++ |..||.....  
T Consensus       147 il~~~~~~~kl~Dfg~~~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~  225 (281)
T 1mp8_A          147 VLVSSNDCVKLGDFGLSRYMED-STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND  225 (281)
T ss_dssp             EEEEETTEEEECC--------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG
T ss_pred             EEECCCCCEEECccccccccCc-ccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH
Confidence            9999999999999999875431 1111223345667899998      6788999999999999996 8888864322  


Q ss_pred             ----------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          142 ----------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       142 ----------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                                ...+...+..+.+++..||+.+|++|||++++++.|+.+...
T Consensus       226 ~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~  277 (281)
T 1mp8_A          226 VIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE  277 (281)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence                      123334567889999999999999999999999999887543

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=2.9e-36  Score=231.76  Aligned_cols=174  Identities=18%  Similarity=0.241  Sum_probs=139.2

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC---cc---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK---EE---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~---~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++   .+..+++|||+++++|.+++.+   ..         |++.||.|||+   .+++|||+||+|
T Consensus        65 l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~N  141 (294)
T 4eqm_A           65 SSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQN  141 (294)
T ss_dssp             HTTCCBTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGG
T ss_pred             HhcCCCCCCceEEEeeeeCCeEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHH
Confidence            567899999999999   7788999999999999999822   22         99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCC--
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKG--  142 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~--  142 (188)
                      |+++.++.+||+|||++.... ...........|++.|++||      ++.++|+||||+++|++++|..||+.....  
T Consensus       142 il~~~~~~~kl~Dfg~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~  220 (294)
T 4eqm_A          142 ILIDSNKTLKIFDFGIAKALS-ETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSI  220 (294)
T ss_dssp             EEECTTSCEEECCCSSSTTC--------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHH
T ss_pred             EEECCCCCEEEEeCCCccccc-cccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence            999999999999999987543 11112233457899999999      688999999999999999999999653211  


Q ss_pred             --------------CcCHHHHHHHHHHHHHccCcCCCCCC-CHHHHHHHHhhccCc
Q 039565          143 --------------EFDIISVEKAVEIAMASVSSKVNRRP-LMNQVVMVREQGSGS  183 (188)
Q Consensus       143 --------------~~~~~~~~~~~~l~~~cl~~~p~~Rp-s~~~i~~~l~~~~~~  183 (188)
                                    ......+..+.+++..|++.+|.+|| +++++.+.|+.....
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~  276 (294)
T 4eqm_A          221 AIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHE  276 (294)
T ss_dssp             HHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSS
T ss_pred             HHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhh
Confidence                          11223457899999999999999999 899999999876543

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=4.8e-36  Score=233.83  Aligned_cols=175  Identities=19%  Similarity=0.243  Sum_probs=138.5

Q ss_pred             cccccCCCeeeeccc--CCccEEEEecCCCCChhhhc-C-Ccc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQ-G-KEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~-~-~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++  ....+++++|+.+|+|.+++ . ...           |++.||.|||+   .+++||||||+|
T Consensus        71 l~~l~hp~iv~~~~~~~~~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~N  147 (327)
T 3lzb_A           71 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARN  147 (327)
T ss_dssp             HTTCCBTTBCCCCEEEESSSEEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGG
T ss_pred             HHhCCCCCeeEEEEEEecCCceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---CCCcCCCCCHHH
Confidence            567899999999999  67789999999999999999 2 221           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCC--
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFK--  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~--  141 (188)
                      |+++.++.+||+|||+++...............++..|++||      ++.++|+||||+++|++++ |..||+....  
T Consensus       148 Il~~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~  227 (327)
T 3lzb_A          148 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE  227 (327)
T ss_dssp             EEEEETTEEEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG
T ss_pred             EEEcCCCCEEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
Confidence            999999999999999998653222222233445677899998      6889999999999999999 9999865322  


Q ss_pred             ----------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          142 ----------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       142 ----------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                                ...+...+..+.+++..||+.+|.+|||++++++.|+.+...
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  279 (327)
T 3lzb_A          228 ISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD  279 (327)
T ss_dssp             HHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred             HHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence                      123334566799999999999999999999999999887653

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=3.2e-36  Score=238.84  Aligned_cols=174  Identities=20%  Similarity=0.249  Sum_probs=132.1

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||++++++   ....++||||+++++|.+++ ....            |++.||.|||+   .+++||||||+
T Consensus       100 l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~  176 (373)
T 2qol_A          100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAAR  176 (373)
T ss_dssp             HTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGG
T ss_pred             HHhCCCCCCCeEEEEEeeCCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcc
Confidence            567899999999999   77889999999999999999 3221            99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCC-cceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCC
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGT-HMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFK  141 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~  141 (188)
                      ||+++.++.+||+|||+++........ .......++..|++||      ++.++|+||||+++|++++ |..||.....
T Consensus       177 NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~  256 (373)
T 2qol_A          177 NILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN  256 (373)
T ss_dssp             GEEECTTCCEEECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH
T ss_pred             eEEEcCCCCEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH
Confidence            999999999999999998764321111 1112234456799998      6889999999999999998 9988853211


Q ss_pred             ------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          142 ------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       142 ------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                                  ...+...+..+.+++..||+.+|++||++++|++.|+.+..
T Consensus       257 ~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~  309 (373)
T 2qol_A          257 QDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR  309 (373)
T ss_dssp             HHHHHHHHTTEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHh
Confidence                        11223455789999999999999999999999999988754

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1e-35  Score=232.91  Aligned_cols=175  Identities=19%  Similarity=0.237  Sum_probs=144.3

Q ss_pred             cccc-cCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc-------------------------c---------cH
Q 039565            6 RNKL-TGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE-------------------------E---------VC   46 (188)
Q Consensus         6 l~~l-~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~-------------------------~---------~i   46 (188)
                      +.++ +||||++++++   .+..++||||+++|+|.+++ ...                         .         |+
T Consensus       102 l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi  181 (344)
T 1rjb_A          102 MTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQV  181 (344)
T ss_dssp             HHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHH
T ss_pred             HHhhcCCCCeeeEEEEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHH
Confidence            4566 89999999998   78899999999999999999 221                         1         99


Q ss_pred             HHHHHHHhcCCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchH
Q 039565           47 CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVD  120 (188)
Q Consensus        47 ~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~  120 (188)
                      +.||.|||+   .+++||||||+||+++.++.++|+|||++................++..|+|||      ++.++|+|
T Consensus       182 ~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~  258 (344)
T 1rjb_A          182 AKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVW  258 (344)
T ss_dssp             HHHHHHHHH---TTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHH
T ss_pred             HHHHHHHHh---CCcccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHH
Confidence            999999999   999999999999999999999999999987654333222333456777899999      68899999


Q ss_pred             HHHHHHHHHHh-CCccccccCC-------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          121 SFEIVILEIIT-GILTVDLSFK-------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       121 s~G~~l~~~~~-g~~p~~~~~~-------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                      |||+++|+|++ |..||.....             ...+...+..+.+++..||+.+|.+|||++++++.|+.+...
T Consensus       259 slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~  335 (344)
T 1rjb_A          259 SYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD  335 (344)
T ss_dssp             HHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence            99999999998 9988865322             122334567899999999999999999999999999887654

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=5.4e-36  Score=245.45  Aligned_cols=174  Identities=24%  Similarity=0.238  Sum_probs=143.2

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcC--Ccc------------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQG--KEE------------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~--~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      |.+++||||++++++   ....++||||+++|+|.+++.  ...            |++.||+|||+   .+++||||||
T Consensus       270 l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp  346 (495)
T 1opk_A          270 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRNLAA  346 (495)
T ss_dssp             HHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSG
T ss_pred             HHhcCCCCEeeEEEEEecCCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCh
Confidence            567899999999999   778999999999999999992  111            99999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCC
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFK  141 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~  141 (188)
                      +||+++.++.+||+|||+++.... ..........++..|+|||      ++.++||||||+++|+|++ |..||.....
T Consensus       347 ~NIll~~~~~~kl~DFG~a~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~  425 (495)
T 1opk_A          347 RNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL  425 (495)
T ss_dssp             GGEEECGGGCEEECCTTCEECCTT-CCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred             hhEEECCCCcEEEeecccceeccC-CceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCH
Confidence            999999999999999999886431 1111122234566799999      6889999999999999999 8888854321


Q ss_pred             ------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          142 ------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       142 ------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                                  ...+...+..+.+++..||+.+|++|||+++|++.|+.+...
T Consensus       426 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~  479 (495)
T 1opk_A          426 SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE  479 (495)
T ss_dssp             GGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred             HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence                        223344567899999999999999999999999999987654

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=9.5e-37  Score=241.34  Aligned_cols=174  Identities=20%  Similarity=0.191  Sum_probs=141.2

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CC---------cc---------cHHHHHHHHhcCCCCCcEE
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GK---------EE---------VCCPGLEYLHQGLKHPIIQ   63 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~---------~~---------~i~~~l~~Lh~~~~~~i~h   63 (188)
                      +.+++||||++++++   ....++||||+++|+|.+++ ..         ..         |++.||.|||+   .+|+|
T Consensus       128 l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH  204 (367)
T 3l9p_A          128 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIH  204 (367)
T ss_dssp             HHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCC
T ss_pred             HHhCCCCCCCeEEEEEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHh---CCeeC
Confidence            457899999999999   77889999999999999999 21         11         99999999999   99999


Q ss_pred             eCCCCCcEEEccCC---ceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CC
Q 039565           64 RDMKSTNILLNEKV---QAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GI  133 (188)
Q Consensus        64 ~dl~~~nill~~~~---~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~  133 (188)
                      |||||+||+++.++   .+||+|||+++...............+++.|+|||      ++.++|+||||+++|+|++ |.
T Consensus       205 rDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~  284 (367)
T 3l9p_A          205 RDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGY  284 (367)
T ss_dssp             SCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             CCCChhhEEEecCCCCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence            99999999999554   59999999987432122222233456788899999      6889999999999999998 88


Q ss_pred             ccccccCC------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          134 LTVDLSFK------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       134 ~p~~~~~~------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                      .||.....            ...+...+..+.+++..||+.+|++|||+++|++.|+....
T Consensus       285 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~  345 (367)
T 3l9p_A          285 MPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ  345 (367)
T ss_dssp             CSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhh
Confidence            88854321            12233455678999999999999999999999999987654

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.3e-35  Score=235.95  Aligned_cols=174  Identities=20%  Similarity=0.216  Sum_probs=143.0

Q ss_pred             cccc-cCCCeeeeccc---CCccEEEEecCCCCChhhhc-C-C-----------------cc---------cHHHHHHHH
Q 039565            6 RNKL-TGPLLVELIGK---QKNNALELGFRGNPELVDQQ-G-K-----------------EE---------VCCPGLEYL   53 (188)
Q Consensus         6 l~~l-~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~-~-----------------~~---------~i~~~l~~L   53 (188)
                      +.++ +||||++++++   .+..++||||+++|+|.+++ . .                 ..         |++.||.||
T Consensus       128 l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~L  207 (382)
T 3tt0_A          128 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL  207 (382)
T ss_dssp             HHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhcCCchhhhheeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHH
Confidence            3456 89999999999   77899999999999999998 2 2                 11         999999999


Q ss_pred             hcCCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHH
Q 039565           54 HQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVIL  127 (188)
Q Consensus        54 h~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~  127 (188)
                      |+   .+++||||||+||+++.++.+||+|||+++...............++..|+|||      ++.++||||||+++|
T Consensus       208 H~---~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~  284 (382)
T 3tt0_A          208 AS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLW  284 (382)
T ss_dssp             HH---TTCCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHH
T ss_pred             Hh---CCEecCCCCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHH
Confidence            99   999999999999999999999999999987653222222333455677899998      688999999999999


Q ss_pred             HHHh-CCccccccC------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          128 EIIT-GILTVDLSF------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       128 ~~~~-g~~p~~~~~------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                      ++++ |..||....            ....+...+..+.+++..||+.+|++|||++++++.|+.+..
T Consensus       285 ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~  352 (382)
T 3tt0_A          285 EIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA  352 (382)
T ss_dssp             HHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            9999 888885422            122233456789999999999999999999999999987653

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=8.4e-36  Score=236.45  Aligned_cols=176  Identities=21%  Similarity=0.269  Sum_probs=134.5

Q ss_pred             CcccccCCCeeeeccc----CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCC
Q 039565            5 NRNKLTGPLLVELIGK----QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMK   67 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~----~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~   67 (188)
                      -+.+++||||++++++    .+..++||||+++|+|.+++ ....            |++.||.|||+   .+++|||||
T Consensus       143 il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlk  219 (373)
T 3c1x_A          143 IMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLA  219 (373)
T ss_dssp             TSTTCCCTTBCCCCEEECCCSSCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCC
T ss_pred             HHHhCCCCCcceEEEEEEcCCCCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCccc
Confidence            4678899999999997    45789999999999999999 3221            99999999999   999999999


Q ss_pred             CCcEEEccCCceEEecccCcccccCCCC--CcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccc
Q 039565           68 STNILLNEKVQAKLADFGQSRISPVEGG--THMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDL  138 (188)
Q Consensus        68 ~~nill~~~~~~kl~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~  138 (188)
                      |+||+++.++.+||+|||+++.......  ........++..|++||      ++.++|+||||+++|++++ |..||..
T Consensus       220 p~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~  299 (373)
T 3c1x_A          220 ARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD  299 (373)
T ss_dssp             GGGEEECTTCCEEECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTT
T ss_pred             hheEEECCCCCEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCC
Confidence            9999999999999999999875431111  11122345667899998      6889999999999999999 6677754


Q ss_pred             cCCCC------------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          139 SFKGE------------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       139 ~~~~~------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                      ....+            .+...+..+.+++..||+.+|++|||++++++.|+.+...
T Consensus       300 ~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~  356 (373)
T 3c1x_A          300 VNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST  356 (373)
T ss_dssp             SCSSCHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence            32211            2234567899999999999999999999999999887543

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.9e-35  Score=228.47  Aligned_cols=172  Identities=25%  Similarity=0.330  Sum_probs=136.9

Q ss_pred             cccccCCCeeeeccc-CCccEEEEecCCCCChhhhc-CCcc--------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK-QKNNALELGFRGNPELVDQQ-GKEE--------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-~~~~~lv~e~~~~~~L~~~~-~~~~--------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||++++++ .+..++||||+++++|.+++ ....              |++.||.|||+....+++||||||+
T Consensus        55 l~~l~hp~iv~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~  134 (307)
T 2eva_A           55 LSRVNHPNIVKLYGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPP  134 (307)
T ss_dssp             HHHCCCTTBCCEEEBCTTTTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGG
T ss_pred             HhcCCCCCcCeEEEEEcCCcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChh
Confidence            567899999999999 77799999999999999999 3221              8899999999843358999999999


Q ss_pred             cEEEccCCc-eEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC-
Q 039565           70 NILLNEKVQ-AKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK-  141 (188)
Q Consensus        70 nill~~~~~-~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~-  141 (188)
                      ||+++.++. +||+|||++.....     ......|+..|+|||      ++.++|+||||+++|+|++|..||+.... 
T Consensus       135 NIll~~~~~~~kl~Dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~  209 (307)
T 2eva_A          135 NLLLVAGGTVLKICDFGTACDIQT-----HMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP  209 (307)
T ss_dssp             GEEEETTTTEEEECCCCC-----------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSS
T ss_pred             HEEEeCCCCEEEEccccccccccc-----ccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCcc
Confidence            999998876 79999999864321     122345888999998      68899999999999999999999864321 


Q ss_pred             -------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          142 -------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       142 -------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                                   .......+..+.+++..||+.+|++|||++++++.|+.+.+
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  263 (307)
T 2eva_A          210 AFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR  263 (307)
T ss_dssp             HHHHHHHHHTTCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred             HHHHHHHHhcCCCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence                         11223445678999999999999999999999999988754

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=6.3e-36  Score=242.52  Aligned_cols=174  Identities=22%  Similarity=0.239  Sum_probs=139.9

Q ss_pred             cccccCCCeeeeccc--CCccEEEEecCCCCChhhhcCC-----cc---------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQGK-----EE---------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~~~-----~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      |.+++||||++++++  .+..++||||+++|+|.+++..     ..         |++.||+|||+   .+++||||||+
T Consensus       233 l~~l~hp~iv~~~~~~~~~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~  309 (452)
T 1fmk_A          233 MKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAA  309 (452)
T ss_dssp             HHHCCCTTBCCEEEEECSSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGG
T ss_pred             HHhCCCCCEeeEEEEEcCCceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChh
Confidence            567899999999999  7788999999999999999932     11         99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccC--
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSF--  140 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~--  140 (188)
                      ||+++.++.+||+|||+++.... ..........++..|+|||      ++.++||||||+++|++++ |..||....  
T Consensus       310 Nill~~~~~~kl~DfG~a~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~  388 (452)
T 1fmk_A          310 NILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR  388 (452)
T ss_dssp             GEEECGGGCEEECCCCTTC---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH
T ss_pred             hEEECCCCCEEECCCccceecCC-CceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH
Confidence            99999999999999999875431 1111222344667899998      6889999999999999999 888885422  


Q ss_pred             ----------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          141 ----------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       141 ----------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                                ....+...+..+.+++..||+.+|++|||+++|++.|+.+...
T Consensus       389 ~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~  441 (452)
T 1fmk_A          389 EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS  441 (452)
T ss_dssp             HHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred             HHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence                      1223345567899999999999999999999999999987653

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=3.1e-35  Score=224.73  Aligned_cols=167  Identities=26%  Similarity=0.351  Sum_probs=138.9

Q ss_pred             cccccCCCeeeeccc-CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCC--cEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK-QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHP--IIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~--i~h~dl~~~   69 (188)
                      +.+++||||++++++ ....+++|||+++++|.+++ .+..            |++.||.|||+   .+  ++|+||||+
T Consensus        77 l~~l~h~~i~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~~ivH~dikp~  153 (287)
T 4f0f_A           77 MSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQN---QNPPIVHRDLRSP  153 (287)
T ss_dssp             HTTCCCTTBCCEEEEETTTTEEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCSCCSGG
T ss_pred             HHhCCCCCchhhheeecCCCeEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHh---CCCCeecCCCCcc
Confidence            466899999999999 66668999999999998888 3322            99999999999   88  999999999


Q ss_pred             cEEEccCCc-----eEEecccCcccccCCCCCcceeeecccccccCCC--------CCCccchHHHHHHHHHHHhCCccc
Q 039565           70 NILLNEKVQ-----AKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE--------LTEKSDVDSFEIVILEIITGILTV  136 (188)
Q Consensus        70 nill~~~~~-----~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe--------~~~~~di~s~G~~l~~~~~g~~p~  136 (188)
                      ||+++.++.     +||+|||+++...     .......|++.|++||        ++.++|+||||+++|++++|..||
T Consensus       154 Nil~~~~~~~~~~~~kl~Dfg~~~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf  228 (287)
T 4f0f_A          154 NIFLQSLDENAPVCAKVADFGLSQQSV-----HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF  228 (287)
T ss_dssp             GEEESCCCTTCSCCEEECCCTTCBCCS-----SCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             eEEEeccCCCCceeEEeCCCCcccccc-----ccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCC
Confidence            999987765     9999999987432     1234467888999999        256799999999999999999998


Q ss_pred             cccCC---------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhc
Q 039565          137 DLSFK---------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQG  180 (188)
Q Consensus       137 ~~~~~---------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~  180 (188)
                      +....               ...+...+..+.+++..||+.+|++|||++++++.|+++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          229 DEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             TTCCCCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             ccccccHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence            64322               223344567899999999999999999999999999864

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=4.7e-36  Score=234.42  Aligned_cols=175  Identities=20%  Similarity=0.228  Sum_probs=142.9

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CC------------------------cc-----------cH
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GK------------------------EE-----------VC   46 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~------------------------~~-----------~i   46 (188)
                      +.+++||||++++++   .+..+++|||+++++|.+++ ..                        ..           |+
T Consensus       104 l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi  183 (343)
T 1luf_A          104 MAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQV  183 (343)
T ss_dssp             HHTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHH
T ss_pred             HHhCCCCCEEEEEEEEccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHH
Confidence            567899999999999   78899999999999999998 21                        11           99


Q ss_pred             HHHHHHHhcCCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchH
Q 039565           47 CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVD  120 (188)
Q Consensus        47 ~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~  120 (188)
                      +.||.|||+   .+++||||||+||+++.++.+||+|||++................++..|++||      ++.++|+|
T Consensus       184 ~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~  260 (343)
T 1luf_A          184 AAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVW  260 (343)
T ss_dssp             HHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHH
T ss_pred             HHHHHHHHh---CCeecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccH
Confidence            999999999   999999999999999999999999999987543221112233456778899998      68899999


Q ss_pred             HHHHHHHHHHh-CCccccccCC------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          121 SFEIVILEIIT-GILTVDLSFK------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       121 s~G~~l~~~~~-g~~p~~~~~~------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                      |||+++|+|++ |..||.....            ...+...+..+.+++..||+.+|.+|||++++++.|+++.++
T Consensus       261 slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~  336 (343)
T 1luf_A          261 AYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCER  336 (343)
T ss_dssp             HHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-
T ss_pred             HHHHHHHHHHhcCCCcCCCCChHHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhh
Confidence            99999999999 8888854211            123344567899999999999999999999999999998765

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=2e-35  Score=223.55  Aligned_cols=168  Identities=13%  Similarity=0.192  Sum_probs=139.9

Q ss_pred             CcccccCCCeeeeccc---C--CccEEEEecCCCCChhhhc-CCc----c---------cHHHHHHHHhcCCCCC--cEE
Q 039565            5 NRNKLTGPLLVELIGK---Q--KNNALELGFRGNPELVDQQ-GKE----E---------VCCPGLEYLHQGLKHP--IIQ   63 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~---~--~~~~lv~e~~~~~~L~~~~-~~~----~---------~i~~~l~~Lh~~~~~~--i~h   63 (188)
                      .+++++||||++++++   .  ...+++|||+++++|.+++ ...    .         |++.||.|||+   .+  ++|
T Consensus        60 ~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~~i~H  136 (271)
T 3kmu_A           60 RLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT---LEPLIPR  136 (271)
T ss_dssp             GGCCCSCTTEECEEEEECTTTSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTT---SSSCCTT
T ss_pred             HHHhcCCCchhheEEEEccCCCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhc---CCCceec
Confidence            4678899999999998   3  6789999999999999999 322    2         99999999998   88  999


Q ss_pred             eCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCC---ccchHHHHHHHHHHHhCCc
Q 039565           64 RDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTE---KSDVDSFEIVILEIITGIL  134 (188)
Q Consensus        64 ~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~---~~di~s~G~~l~~~~~g~~  134 (188)
                      +|+||+||+++.++.+++.||+++....       .....+++.|+|||      .+.   ++|+||||+++|++++|..
T Consensus       137 ~dikp~Nil~~~~~~~~l~~~~~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~  209 (271)
T 3kmu_A          137 HALNSRSVMIDEDMTARISMADVKFSFQ-------SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREV  209 (271)
T ss_dssp             CCCSGGGEEECTTSCEEEEGGGSCCTTS-------CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSC
T ss_pred             CCCccceEEEcCCcceeEEeccceeeec-------ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCC
Confidence            9999999999999999999988765322       12245788899999      122   6999999999999999999


Q ss_pred             ccccc-------------CCCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          135 TVDLS-------------FKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       135 p~~~~-------------~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                      ||...             .....+...+..+.+++..||+.+|++|||++++++.|+.+.+
T Consensus       210 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~  270 (271)
T 3kmu_A          210 PFADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD  270 (271)
T ss_dssp             TTTTSCHHHHHHHHHHSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred             CccccChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence            98532             1223344556789999999999999999999999999998765

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=7.8e-36  Score=232.34  Aligned_cols=167  Identities=22%  Similarity=0.274  Sum_probs=138.6

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc-c-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE-E-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~-~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++   ....++||||+++++|.+++... .           |++.||.|||+   .+++||||||+|
T Consensus        59 l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~N  135 (323)
T 3tki_A           59 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPEN  135 (323)
T ss_dssp             HHHCCCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGG
T ss_pred             HHhCCCCCCCeEEEEEecCCeEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccccchHH
Confidence            456899999999999   77889999999999999999333 2           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCCCC
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFKGE  143 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~~  143 (188)
                      |+++.++.+||+|||++................|++.|+|||       .+.++|+||||+++|+|++|..||+......
T Consensus       136 Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~  215 (323)
T 3tki_A          136 LLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC  215 (323)
T ss_dssp             EEECTTCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTS
T ss_pred             EEEeCCCCEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHH
Confidence            999999999999999997543222222334567899999999       2567999999999999999999996533211


Q ss_pred             --------------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          144 --------------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       144 --------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                    .....+..+.+++..||+.+|.+|||++++++
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~  261 (323)
T 3tki_A          216 QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKK  261 (323)
T ss_dssp             HHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHhcccccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence                          11234567889999999999999999999987

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=1.6e-35  Score=232.03  Aligned_cols=165  Identities=20%  Similarity=0.258  Sum_probs=138.3

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC---cc---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK---EE---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~---~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++   .+..++||||+++|+|..++.+   ..         |++.||.|||+   .+|+||||||+|
T Consensus        59 l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~N  135 (337)
T 1o6l_A           59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLEN  135 (337)
T ss_dssp             HHSCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGG
T ss_pred             HHhCCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCCHHH
Confidence            457899999999998   7889999999999999998822   22         99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC---
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK---  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~---  141 (188)
                      |+++.++.+||+|||+++....  .........|++.|+|||      ++.++|+||||+++|+|++|..||.....   
T Consensus       136 Ill~~~g~vkL~DFG~a~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~  213 (337)
T 1o6l_A          136 LMLDKDGHIKITDFGLCKEGIS--DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL  213 (337)
T ss_dssp             EEECTTSCEEECCCTTCBCSCC--TTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             EEECCCCCEEEeeccchhhccc--CCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHH
Confidence            9999999999999999875321  122344567999999999      58899999999999999999999864321   


Q ss_pred             --------CCcCHHHHHHHHHHHHHccCcCCCCCC-----CHHHHHH
Q 039565          142 --------GEFDIISVEKAVEIAMASVSSKVNRRP-----LMNQVVM  175 (188)
Q Consensus       142 --------~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~i~~  175 (188)
                              ..++...+..+.+++..||+.+|++||     +++++++
T Consensus       214 ~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~  260 (337)
T 1o6l_A          214 FELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             HHHHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             HHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence                    123334567889999999999999999     8999876

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.1e-34  Score=225.95  Aligned_cols=173  Identities=20%  Similarity=0.199  Sum_probs=137.5

Q ss_pred             cccCCCeeeeccc---C----CccEEEEecCCCCChhhhc--CCcc---------cHHHHHHHHhcCCCC--------Cc
Q 039565            8 KLTGPLLVELIGK---Q----KNNALELGFRGNPELVDQQ--GKEE---------VCCPGLEYLHQGLKH--------PI   61 (188)
Q Consensus         8 ~l~Hpniv~~~~~---~----~~~~lv~e~~~~~~L~~~~--~~~~---------~i~~~l~~Lh~~~~~--------~i   61 (188)
                      .++||||++++++   .    ...++||||+++|+|.+++  ....         |++.||.|||+   .        ++
T Consensus        87 ~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~~~~i  163 (337)
T 3mdy_A           87 LMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHT---EIFSTQGKPAI  163 (337)
T ss_dssp             TCCCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHS---CBCSTTCBCCE
T ss_pred             hhcCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHH---hhhhhccCCCE
Confidence            4689999999988   3    6789999999999999999  2222         99999999998   6        99


Q ss_pred             EEeCCCCCcEEEccCCceEEecccCcccccCCCCCc--ceeeecccccccCCC------CCCc------cchHHHHHHHH
Q 039565           62 IQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTH--MSTTIAGTAGFLNTE------LTEK------SDVDSFEIVIL  127 (188)
Q Consensus        62 ~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~--~~~~~~~~~~~~~pe------~~~~------~di~s~G~~l~  127 (188)
                      +||||||+||+++.++.+||+|||++..........  ......|+..|+|||      ....      +||||||+++|
T Consensus       164 vH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~  243 (337)
T 3mdy_A          164 AHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILW  243 (337)
T ss_dssp             ECSCCCGGGEEECTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHH
T ss_pred             EecccchHHEEECCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHH
Confidence            999999999999999999999999987543221111  122457899999999      2233      89999999999


Q ss_pred             HHHhC----------CccccccCCC------------------Cc-----CHHHHHHHHHHHHHccCcCCCCCCCHHHHH
Q 039565          128 EIITG----------ILTVDLSFKG------------------EF-----DIISVEKAVEIAMASVSSKVNRRPLMNQVV  174 (188)
Q Consensus       128 ~~~~g----------~~p~~~~~~~------------------~~-----~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~  174 (188)
                      +|++|          ..||......                  ..     ....+..+.+++..||+.+|.+|||+++++
T Consensus       244 el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell  323 (337)
T 3mdy_A          244 EVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVK  323 (337)
T ss_dssp             HHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred             HHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHH
Confidence            99999          5555432111                  11     125677899999999999999999999999


Q ss_pred             HHHhhccCc
Q 039565          175 MVREQGSGS  183 (188)
Q Consensus       175 ~~l~~~~~~  183 (188)
                      +.|+.+.+.
T Consensus       324 ~~L~~l~~~  332 (337)
T 3mdy_A          324 KTLAKMSES  332 (337)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHhh
Confidence            999988765

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=8.6e-36  Score=231.42  Aligned_cols=175  Identities=23%  Similarity=0.248  Sum_probs=134.6

Q ss_pred             cccccCCCeeeeccc---CCcc------EEEEecCCCCChhhhc-CC--------cc---------cHHHHHHHHhcCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNN------ALELGFRGNPELVDQQ-GK--------EE---------VCCPGLEYLHQGLK   58 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~------~lv~e~~~~~~L~~~~-~~--------~~---------~i~~~l~~Lh~~~~   58 (188)
                      +.+++||||++++++   ....      ++++||+++++|.+++ ..        ..         |++.||.|||+   
T Consensus        79 l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---  155 (323)
T 3qup_A           79 MKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS---  155 (323)
T ss_dssp             HTTCCCTTBCCCCEEEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH---
T ss_pred             HHHCCCCceehhhceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHc---
Confidence            567899999999998   3232      8999999999999998 11        11         99999999999   


Q ss_pred             CCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-
Q 039565           59 HPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-  131 (188)
Q Consensus        59 ~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-  131 (188)
                      .+++||||||+||+++.++.+||+|||+++...............+++.|++||      ++.++|+||||+++|++++ 
T Consensus       156 ~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~  235 (323)
T 3qup_A          156 RNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTR  235 (323)
T ss_dssp             TTCCCSCCSGGGEEECTTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred             CCcccCCCCcceEEEcCCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhC
Confidence            999999999999999999999999999987543222222233445667899998      6889999999999999999 


Q ss_pred             CCccccccCC------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          132 GILTVDLSFK------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       132 g~~p~~~~~~------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                      |..||.....            ...+...+..+.+++..||+.+|++|||+.++++.|+++...
T Consensus       236 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~  299 (323)
T 3qup_A          236 GQTPYAGIENAEIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGH  299 (323)
T ss_dssp             SCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             CCCCccccChHHHHHHHhcCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            8898864321            223344567899999999999999999999999999987654

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=1.9e-35  Score=233.46  Aligned_cols=173  Identities=19%  Similarity=0.223  Sum_probs=139.4

Q ss_pred             cccccCCCeeeeccc---C----CccEEEEecCCCCChhhhc-CC-c--c---------cHHHHHHHHhcCCCCCcEEeC
Q 039565            6 RNKLTGPLLVELIGK---Q----KNNALELGFRGNPELVDQQ-GK-E--E---------VCCPGLEYLHQGLKHPIIQRD   65 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~----~~~~lv~e~~~~~~L~~~~-~~-~--~---------~i~~~l~~Lh~~~~~~i~h~d   65 (188)
                      +..++||||++++++   .    ...++||||+ +++|.+++ .. .  .         |++.||.|||+   .+++|||
T Consensus       102 ~~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~---~~iiHrD  177 (364)
T 3op5_A          102 TRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHE---HEYVHGD  177 (364)
T ss_dssp             HTTCSCCCSCCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCC
T ss_pred             HhhccCCCCCeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCeEEec
Confidence            467889999999998   1    4479999999 89999999 32 1  1         99999999999   9999999


Q ss_pred             CCCCcEEEc--cCCceEEecccCcccccCCCCC-----cceeeecccccccCCC------CCCccchHHHHHHHHHHHhC
Q 039565           66 MKSTNILLN--EKVQAKLADFGQSRISPVEGGT-----HMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITG  132 (188)
Q Consensus        66 l~~~nill~--~~~~~kl~d~~~~~~~~~~~~~-----~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g  132 (188)
                      |||+||+++  .++.+||+|||+++........     .......|+..|+|||      ++.++||||||+++|+|++|
T Consensus       178 lkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g  257 (364)
T 3op5_A          178 IKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTG  257 (364)
T ss_dssp             CCGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHS
T ss_pred             CCHHHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhC
Confidence            999999999  8899999999999754321111     1113355899999998      67899999999999999999


Q ss_pred             CccccccCCCCc-------------C---------HHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          133 ILTVDLSFKGEF-------------D---------IISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       133 ~~p~~~~~~~~~-------------~---------~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                      ..||........             .         ...+..+.+++..||+.+|++||++++|++.|+++..
T Consensus       258 ~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~  329 (364)
T 3op5_A          258 HLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLK  329 (364)
T ss_dssp             CCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred             CCCccccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Confidence            999985432210             0         0114578899999999999999999999999977643

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=5.5e-35  Score=227.29  Aligned_cols=165  Identities=19%  Similarity=0.212  Sum_probs=138.4

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCcE
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTNI   71 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~ni   71 (188)
                      +.+++||||++++++   .+..+++|||+++++|.+++.+..           |++.||.|||+   .+++|||+||+||
T Consensus        96 l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NI  172 (321)
T 2c30_A           96 MRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHA---QGVIHRDIKSDSI  172 (321)
T ss_dssp             HTTCCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGE
T ss_pred             HHhCCCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHE
Confidence            567899999999998   788999999999999999984332           99999999999   9999999999999


Q ss_pred             EEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC----
Q 039565           72 LLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK----  141 (188)
Q Consensus        72 ll~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~----  141 (188)
                      +++.++.+||+|||++......  ........|++.|+|||      ++.++|+||||+++|+|++|..||.....    
T Consensus       173 ll~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~  250 (321)
T 2c30_A          173 LLTLDGRVKLSDFGFCAQISKD--VPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM  250 (321)
T ss_dssp             EECTTCCEEECCCTTCEECCSS--SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH
T ss_pred             EECCCCcEEEeeeeeeeecccC--ccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            9999999999999998754321  12234567899999998      57899999999999999999999853211    


Q ss_pred             ----------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 ----------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 ----------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                .......+..+.+++..||+.+|++|||++++++
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  294 (321)
T 2c30_A          251 KRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLD  294 (321)
T ss_dssp             HHHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHhcCCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                      0112234567899999999999999999999987

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=1.9e-35  Score=224.05  Aligned_cols=168  Identities=23%  Similarity=0.304  Sum_probs=132.9

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc-----------cHHHHHHHHhcCCCCC---cEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE-----------VCCPGLEYLHQGLKHP---IIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~-----------~i~~~l~~Lh~~~~~~---i~h~dl~~   68 (188)
                      +.+++||||++++++   .+..+++|||+++++|.+++....           |++.||.|||+   .+   ++|+|+||
T Consensus        60 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~---~~~~~i~H~dikp  136 (271)
T 3dtc_A           60 FAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHD---EAIVPIIHRDLKS  136 (271)
T ss_dssp             HHHCCCTTBCCEEEEECCC--CEEEEECCTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHH---SSSSCCCCSCCSG
T ss_pred             HHhcCCCCEeeEEEEEecCCceEEEEEcCCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh---CCCCceeecCCch
Confidence            456899999999999   778899999999999999983322           99999999999   77   99999999


Q ss_pred             CcEEEcc--------CCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCc
Q 039565           69 TNILLNE--------KVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGIL  134 (188)
Q Consensus        69 ~nill~~--------~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~  134 (188)
                      +||+++.        ++.++++|||.+......    ......|++.|++||      ++.++|+||||+++|++++|..
T Consensus       137 ~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~  212 (271)
T 3dtc_A          137 SNILILQKVENGDLSNKILKITDFGLAREWHRT----TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEV  212 (271)
T ss_dssp             GGEEESSCCSSSCCSSCCEEECCCCC-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCC
T ss_pred             HHEEEecccccccccCcceEEccCCcccccccc----cccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCC
Confidence            9999986        678999999998754211    122456888999998      6889999999999999999999


Q ss_pred             cccccC-------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhc
Q 039565          135 TVDLSF-------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQG  180 (188)
Q Consensus       135 p~~~~~-------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~  180 (188)
                      ||....             ....+...+..+.+++..||+.+|.+|||++++++.|+.+
T Consensus       213 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          213 PFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             TTTTSCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             CCCCCCHHHHHHhhhcCCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence            986422             1223345567899999999999999999999999999864

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=4.1e-35  Score=228.61  Aligned_cols=174  Identities=16%  Similarity=0.171  Sum_probs=136.3

Q ss_pred             cccccCCCeeeeccc--------CCccEEEEecCCCCChhhhc--CCcc---------cHHHHHHHHhcCCCC-------
Q 039565            6 RNKLTGPLLVELIGK--------QKNNALELGFRGNPELVDQQ--GKEE---------VCCPGLEYLHQGLKH-------   59 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--------~~~~~lv~e~~~~~~L~~~~--~~~~---------~i~~~l~~Lh~~~~~-------   59 (188)
                      +..++||||+++++.        ....++||||+++|+|.+++  ....         |++.||.|||+   .       
T Consensus        61 ~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~---~~~~~~~~  137 (336)
T 3g2f_A           61 VPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHT---ELPRGDHY  137 (336)
T ss_dssp             STTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHC---CBCCGGGC
T ss_pred             HHhccCcchhhheecccccccCCCceEEEEEecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHh---hhcccccc
Confidence            456899999999864        34568999999999999999  2222         99999999998   7       


Q ss_pred             --CcEEeCCCCCcEEEccCCceEEecccCcccccCCC------CCcceeeecccccccCCCC-------------CCccc
Q 039565           60 --PIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEG------GTHMSTTIAGTAGFLNTEL-------------TEKSD  118 (188)
Q Consensus        60 --~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~------~~~~~~~~~~~~~~~~pe~-------------~~~~d  118 (188)
                        +++||||||+||+++.++.+||+|||+++......      .........|+..|+|||.             +.++|
T Consensus       138 ~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~D  217 (336)
T 3g2f_A          138 KPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVD  217 (336)
T ss_dssp             BCCEECSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHH
T ss_pred             ccceeecccccceEEEcCCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccc
Confidence              99999999999999999999999999997543211      1112224568999999992             24689


Q ss_pred             hHHHHHHHHHHHhCCccccccCC-------------------------------CC------cCHHHHHHHHHHHHHccC
Q 039565          119 VDSFEIVILEIITGILTVDLSFK-------------------------------GE------FDIISVEKAVEIAMASVS  161 (188)
Q Consensus       119 i~s~G~~l~~~~~g~~p~~~~~~-------------------------------~~------~~~~~~~~~~~l~~~cl~  161 (188)
                      |||||+++|+|++|..|+-+...                               ..      .....+..+.+++..||+
T Consensus       218 iwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  297 (336)
T 3g2f_A          218 MYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWD  297 (336)
T ss_dssp             HHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSC
T ss_pred             hHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhc
Confidence            99999999999999765522111                               00      112355679999999999


Q ss_pred             cCCCCCCCHHHHHHHHhhccC
Q 039565          162 SKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       162 ~~p~~Rps~~~i~~~l~~~~~  182 (188)
                      .+|++|||++++++.|+++..
T Consensus       298 ~dP~~Rps~~e~l~~L~~ll~  318 (336)
T 3g2f_A          298 QDAEARLTAQXAEERMAELMM  318 (336)
T ss_dssp             SSGGGSCCHHHHHHHHHHHHH
T ss_pred             CChhhCcchHHHHHHHHHHHH
Confidence            999999999999999988653

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=1.1e-35  Score=226.66  Aligned_cols=173  Identities=21%  Similarity=0.213  Sum_probs=139.8

Q ss_pred             cccccCCCeeeeccc--CCccEEEEecCCCCChhhhc-C-C--cc---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQ-G-K--EE---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~-~-~--~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++  .+..+++|||+++++|.+++ . .  ..         |++.||.|||+   .+++|+|+||+|
T Consensus        67 l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~N  143 (281)
T 3cc6_A           67 MKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES---INCVHRDIAVRN  143 (281)
T ss_dssp             HHHHCCTTBCCEEEEECSSSCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGG
T ss_pred             HHhCCCCCcceEEEEEcCCCCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccce
Confidence            567899999999999  77789999999999999999 2 1  12         99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCC--
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFK--  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~--  141 (188)
                      |+++.++.++|+|||++..... ..........++..|+|||      ++.++|+||||+++|++++ |..||.....  
T Consensus       144 il~~~~~~~kl~Dfg~~~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~  222 (281)
T 3cc6_A          144 ILVASPECVKLGDFGLSRYIED-EDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD  222 (281)
T ss_dssp             EEEEETTEEEECCCCGGGCC----------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG
T ss_pred             EEECCCCcEEeCccCCCccccc-ccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH
Confidence            9999999999999999875431 1111223345667899998      6888999999999999998 9999853221  


Q ss_pred             ----------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          142 ----------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       142 ----------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                                ...+...+..+.+++..||+.+|++|||++++++.|+.+..
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~  273 (281)
T 3cc6_A          223 VIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ  273 (281)
T ss_dssp             HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHhcCCCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence                      11223345679999999999999999999999999988754

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=1.6e-34  Score=224.21  Aligned_cols=170  Identities=17%  Similarity=0.162  Sum_probs=139.9

Q ss_pred             cccccCCCeeeeccc-----CCccEEEEecCCCCChhhhcCC------cc---------cHHHHHHHHhcCCCCCcEEeC
Q 039565            6 RNKLTGPLLVELIGK-----QKNNALELGFRGNPELVDQQGK------EE---------VCCPGLEYLHQGLKHPIIQRD   65 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-----~~~~~lv~e~~~~~~L~~~~~~------~~---------~i~~~l~~Lh~~~~~~i~h~d   65 (188)
                      +.+++||||++++++     ....++||||+++++|.+++..      ..         |++.||.|||+   .+++|||
T Consensus        61 l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~D  137 (319)
T 4euu_A           61 LKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRN  137 (319)
T ss_dssp             HHHCCCTTBCCEEEEEECTTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSC
T ss_pred             HHhcCCCCcceEEEEeecCCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCC
Confidence            567899999999988     3377999999999999999922      12         99999999999   9999999


Q ss_pred             CCCCcEEE----ccCCceEEecccCcccccCCCCCcceeeecccccccCCC--------------CCCccchHHHHHHHH
Q 039565           66 MKSTNILL----NEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE--------------LTEKSDVDSFEIVIL  127 (188)
Q Consensus        66 l~~~nill----~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe--------------~~~~~di~s~G~~l~  127 (188)
                      |||+||++    +.++.+||+|||+++.....   .......|+..|++||              ++.++|+||||+++|
T Consensus       138 lkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~  214 (319)
T 4euu_A          138 IKPGNIMRVIGEDGQSVYKLTDFGAARELEDD---EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFY  214 (319)
T ss_dssp             CSGGGEEEEECTTSCEEEEECCCTTCEECCTT---CCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHH
T ss_pred             CCHHHEEEeccCCCCceEEEccCCCceecCCC---CceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHH
Confidence            99999999    77778999999999764321   1233456888999987              357899999999999


Q ss_pred             HHHhCCccccccCC----------------------------------------CCcCHHHHHHHHHHHHHccCcCCCCC
Q 039565          128 EIITGILTVDLSFK----------------------------------------GEFDIISVEKAVEIAMASVSSKVNRR  167 (188)
Q Consensus       128 ~~~~g~~p~~~~~~----------------------------------------~~~~~~~~~~~~~l~~~cl~~~p~~R  167 (188)
                      +|++|..||.+...                                        ..........+.+++..||+.||++|
T Consensus       215 el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R  294 (319)
T 4euu_A          215 HAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKC  294 (319)
T ss_dssp             HHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTS
T ss_pred             HHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhh
Confidence            99999999853211                                        12345677889999999999999999


Q ss_pred             CCHHHHHHHHhhcc
Q 039565          168 PLMNQVVMVREQGS  181 (188)
Q Consensus       168 ps~~~i~~~l~~~~  181 (188)
                      ||++|+++......
T Consensus       295 ~s~~ell~h~~d~~  308 (319)
T 4euu_A          295 WGFDQFFAETSDIL  308 (319)
T ss_dssp             CCHHHHHHHHHHHT
T ss_pred             ccHHHhhhccHHHh
Confidence            99999999876543

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=2.3e-35  Score=227.76  Aligned_cols=175  Identities=20%  Similarity=0.219  Sum_probs=143.8

Q ss_pred             cccc-cCCCeeeeccc---CCccEEEEecCCCCChhhhc-CC--------------------cc---------cHHHHHH
Q 039565            6 RNKL-TGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GK--------------------EE---------VCCPGLE   51 (188)
Q Consensus         6 l~~l-~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~--------------------~~---------~i~~~l~   51 (188)
                      +.++ +||||++++++   .+..+++|||+++|+|.+++ ..                    ..         |++.||.
T Consensus        80 l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~  159 (313)
T 1t46_A           80 LSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMA  159 (313)
T ss_dssp             HHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHH
T ss_pred             HhhcccCCCeeeEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHH
Confidence            4566 89999999998   78899999999999999998 21                    11         9999999


Q ss_pred             HHhcCCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHH
Q 039565           52 YLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIV  125 (188)
Q Consensus        52 ~Lh~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~  125 (188)
                      |||+   .+++|+||||+||+++.++.+||+|||++................++..|++||      ++.++|+||||++
T Consensus       160 ~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  236 (313)
T 1t46_A          160 FLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIF  236 (313)
T ss_dssp             HHHH---TTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             HHHH---CCeecCCCccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHH
Confidence            9999   999999999999999999999999999987654322222233445677899998      6889999999999


Q ss_pred             HHHHHh-CCccccccCCC-------------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          126 ILEIIT-GILTVDLSFKG-------------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       126 l~~~~~-g~~p~~~~~~~-------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                      +|+|++ |..||......             ..+...+..+.+++..||+.+|.+|||++++++.|++....
T Consensus       237 l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  308 (313)
T 1t46_A          237 LWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE  308 (313)
T ss_dssp             HHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHhCCCCCCCcccchhHHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence            999998 88888643221             12234456889999999999999999999999999887543

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=3.5e-35  Score=245.99  Aligned_cols=173  Identities=21%  Similarity=0.238  Sum_probs=139.7

Q ss_pred             cccccCCCeeeeccc--CCccEEEEecCCCCChhhhcC-Ccc------------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQG-KEE------------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~~-~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      |.+++||||++++++  .+..++||||+++|+|.+++. +..            |++.||+|||+   .+|+||||||+|
T Consensus       390 l~~l~hpniv~l~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiHrDlkp~N  466 (613)
T 2ozo_A          390 MHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRNLAARN  466 (613)
T ss_dssp             HTTCCCTTBCCEEEEEESSSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGG
T ss_pred             HHhCCCCCEeeEEEEeccCCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCcCCHHH
Confidence            567899999999999  778999999999999999982 221            99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCc-ceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCC-
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTH-MSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFK-  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~-  141 (188)
                      |+++.++.+||+|||+++......... ......++..|+|||      ++.++||||||+++|+|++ |..||..... 
T Consensus       467 ILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~  546 (613)
T 2ozo_A          467 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP  546 (613)
T ss_dssp             EEEEETTEEEECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH
T ss_pred             EEEcCCCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH
Confidence            999999999999999998643221111 112234557899998      6889999999999999998 9999864321 


Q ss_pred             -----------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhcc
Q 039565          142 -----------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGS  181 (188)
Q Consensus       142 -----------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~  181 (188)
                                 ...+...+..+.+++..||+.+|++||++++|++.|+...
T Consensus       547 ~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~  597 (613)
T 2ozo_A          547 EVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY  597 (613)
T ss_dssp             HHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence                       2234456678999999999999999999999999998753

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=3.4e-35  Score=225.58  Aligned_cols=176  Identities=22%  Similarity=0.275  Sum_probs=140.3

Q ss_pred             cccccCCCeeeeccc----CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK----QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~----~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +.+++||||++++++    ....+++|||+++++|.+++ ....            |++.||.|||+   .+++|||+||
T Consensus        80 l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~---~~i~H~dikp  156 (298)
T 3f66_A           80 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAA  156 (298)
T ss_dssp             HHTCCCTTBCCCCEEECCSSSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSG
T ss_pred             HHhCCCCCEeeeeeEEEcCCCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCch
Confidence            567899999999997    56789999999999999999 3221            99999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCC--CcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCcccccc
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGG--THMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLS  139 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~  139 (188)
                      +||+++.++.+||+|||++........  ........+++.|++||      ++.++|+||||+++|++++ +..||...
T Consensus       157 ~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~  236 (298)
T 3f66_A          157 RNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV  236 (298)
T ss_dssp             GGEEECTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTS
T ss_pred             heEEECCCCCEEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccC
Confidence            999999999999999999875431111  11222345677899998      6889999999999999999 45566433


Q ss_pred             CCCC------------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCcc
Q 039565          140 FKGE------------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGSR  184 (188)
Q Consensus       140 ~~~~------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~~  184 (188)
                      ...+            .+...+..+.+++..||+.+|.+|||++++++.|+.+....
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~  293 (298)
T 3f66_A          237 NTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF  293 (298)
T ss_dssp             CTTTHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTS
T ss_pred             CHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence            2211            22334667999999999999999999999999999876543

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=3.5e-35  Score=232.01  Aligned_cols=164  Identities=24%  Similarity=0.293  Sum_probs=136.9

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++   ....++||||+++|+|.+++....            |++.||.|||+   .+++||||||+|
T Consensus        69 l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~N  145 (361)
T 2yab_A           69 LRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPEN  145 (361)
T ss_dssp             HTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGG
T ss_pred             HHhCCCcCCCcEEEEEEeCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHH
Confidence            567899999999999   778999999999999999993322            99999999999   999999999999


Q ss_pred             EEEccCC----ceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           71 ILLNEKV----QAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        71 ill~~~~----~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      |+++.++    .+||+|||++.....   ........|++.|+|||      ++.++|+||||+++|+|++|..||....
T Consensus       146 Ill~~~~~~~~~vkl~DFG~a~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~  222 (361)
T 2yab_A          146 IMLLDKNIPIPHIKLIDFGLAHEIED---GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT  222 (361)
T ss_dssp             EEESCTTSSSCCEEECCCSSCEECCT---TCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS
T ss_pred             EEEeCCCCCccCEEEEecCCceEcCC---CCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC
Confidence            9998776    799999999876432   12234467999999998      6889999999999999999999996432


Q ss_pred             C-----------CCcCH----HHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          141 K-----------GEFDI----ISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       141 ~-----------~~~~~----~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      .           ..++.    ..+..+.+++..||..||.+|||++++++
T Consensus       223 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          223 KQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR  272 (361)
T ss_dssp             HHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            1           11221    23567899999999999999999999885

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=6.2e-35  Score=236.16  Aligned_cols=165  Identities=19%  Similarity=0.201  Sum_probs=137.0

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++   ....++||||+++|+|.+++ .+..           |++.||.|||+   .+|+||||||+|
T Consensus        64 l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~---~givHrDlKp~N  140 (444)
T 3soa_A           64 CRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ---MGVVHRNLKPEN  140 (444)
T ss_dssp             HHHCCBTTBCCEEEEEECSSEEEEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSSTT
T ss_pred             HHhCCCcCCCeEEEEEEECCEEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHH
Confidence            567899999999999   78889999999999999988 3222           99999999999   999999999999


Q ss_pred             EEEcc---CCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC
Q 039565           71 ILLNE---KVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK  141 (188)
Q Consensus        71 ill~~---~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~  141 (188)
                      |+++.   ++.+||+|||++.....  .........|++.|+|||      ++.++||||+|+++|+|++|..||.....
T Consensus       141 Ill~~~~~~~~vkL~DFG~a~~~~~--~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~  218 (444)
T 3soa_A          141 LLLASKLKGAAVKLADFGLAIEVEG--EQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ  218 (444)
T ss_dssp             EEESBSSTTCCEEECCCSSCBCCCT--TCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             EEEeccCCCCcEEEccCceeEEecC--CCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH
Confidence            99984   57899999999975432  222234567999999998      68899999999999999999999854221


Q ss_pred             ---------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 ---------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 ---------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                     .......+..+.+++..||+.||++|||+.++++
T Consensus       219 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~  267 (444)
T 3soa_A          219 HRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALK  267 (444)
T ss_dssp             HHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence                           1111234678899999999999999999999987

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=1.2e-35  Score=224.63  Aligned_cols=175  Identities=24%  Similarity=0.297  Sum_probs=142.3

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc---c---------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE---E---------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~---~---------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||++++++   ....+++|||+++++|.+++ ...   .         |++.||.|||+   .+++|+|+||+
T Consensus        57 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~  133 (267)
T 3t9t_A           57 MMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAAR  133 (267)
T ss_dssp             HHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGG
T ss_pred             HHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchh
Confidence            567899999999998   77899999999999999999 221   1         99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccC--
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSF--  140 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~--  140 (188)
                      ||+++.++.++++|||++..... ..........++..|++||      ++.++|+||||+++|++++ |..||....  
T Consensus       134 Nili~~~~~~kl~dfg~~~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~  212 (267)
T 3t9t_A          134 NCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS  212 (267)
T ss_dssp             GEEECGGGCEEECCTTGGGGBCC-HHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH
T ss_pred             eEEECCCCCEEEccccccccccc-ccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH
Confidence            99999999999999999875421 1111112234566799998      6789999999999999999 888886422  


Q ss_pred             ----------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCcc
Q 039565          141 ----------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGSR  184 (188)
Q Consensus       141 ----------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~~  184 (188)
                                ....+...+..+.+++..||+.+|++|||++++++.|+++.++.
T Consensus       213 ~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~  266 (267)
T 3t9t_A          213 EVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAESG  266 (267)
T ss_dssp             HHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred             HHHHHHhcCCcCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence                      11223344678899999999999999999999999999987654

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=2.7e-35  Score=230.59  Aligned_cols=163  Identities=23%  Similarity=0.346  Sum_probs=137.0

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-C--Ccc---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-G--KEE---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~--~~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +..++||||++++++   ....++||||+ +|+|.+++ .  ...         |++.||.|||+   .+++||||||+|
T Consensus        63 l~~l~hpnIv~l~~~~~~~~~~~lv~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~N  138 (336)
T 3h4j_B           63 LKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHR---HKIVHRDLKPEN  138 (336)
T ss_dssp             HTTCCCTTBCCEEEEEECSSEEEEEECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCCSTTT
T ss_pred             HHhCCCCCCCeEEEEEEeCCEEEEEEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCchhh
Confidence            567899999999999   77889999999 57888887 2  222         99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCCC-------CCccchHHHHHHHHHHHhCCccccccCCC-
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTEL-------TEKSDVDSFEIVILEIITGILTVDLSFKG-  142 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~-------~~~~di~s~G~~l~~~~~g~~p~~~~~~~-  142 (188)
                      |+++.++.+||+|||++....   .........|++.|+|||.       +.++|+||||+++|+|++|..||+..... 
T Consensus       139 Ill~~~~~~kl~DFG~s~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~  215 (336)
T 3h4j_B          139 LLLDDNLNVKIADFGLSNIMT---DGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN  215 (336)
T ss_dssp             EEECTTCCEEECCSSCTBTTT---TSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTT
T ss_pred             EEEcCCCCEEEEEeccceecc---CCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHH
Confidence            999999999999999987543   2222345678999999992       56899999999999999999999754321 


Q ss_pred             ----------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          143 ----------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       143 ----------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                ..+...+..+.+++..||+.||.+|||++++++
T Consensus       216 ~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~  258 (336)
T 3h4j_B          216 LFKKVNSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRR  258 (336)
T ss_dssp             CBCCCCSSCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred             HHHHHHcCCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence                      133445678999999999999999999999987

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=1.2e-35  Score=226.67  Aligned_cols=173  Identities=22%  Similarity=0.270  Sum_probs=141.3

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-cc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-EE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||++++++   ....+++|||+++++|.+++.. ..            |++.||.|||+   .+++|+|+||+
T Consensus        73 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~  149 (283)
T 3gen_A           73 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAAR  149 (283)
T ss_dssp             HHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGG
T ss_pred             HhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCccc
Confidence            567889999999999   6788999999999999999933 21            99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccC--
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSF--  140 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~--  140 (188)
                      ||+++.++.++|+|||++..... ..........++..|++||      ++.++|+||||+++|++++ |..||....  
T Consensus       150 Nili~~~~~~kl~Dfg~~~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~  228 (283)
T 3gen_A          150 NCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS  228 (283)
T ss_dssp             GEEECTTSCEEECSTTGGGGBCC-HHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH
T ss_pred             eEEEcCCCCEEEccccccccccc-cccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh
Confidence            99999999999999999875421 1111122334566799998      6889999999999999998 999886421  


Q ss_pred             ----------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          141 ----------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       141 ----------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                                ....+...+..+.+++..||+.+|.+|||++++++.|+.+.+
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~  280 (283)
T 3gen_A          229 ETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD  280 (283)
T ss_dssp             HHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHhcccCCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence                      122233345688999999999999999999999999988754

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=2.9e-35  Score=228.22  Aligned_cols=176  Identities=17%  Similarity=0.175  Sum_probs=143.7

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-----------c--c---------cHHHHHHHHhcCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-----------E--E---------VCCPGLEYLHQGLKHP   60 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-----------~--~---------~i~~~l~~Lh~~~~~~   60 (188)
                      +.+++||||++++++   ....++||||+++++|.+++..           .  .         |++.||.|||+   .+
T Consensus        82 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~  158 (322)
T 1p4o_A           82 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NK  158 (322)
T ss_dssp             GGGCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TT
T ss_pred             HHhcCCCCEeeeEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHH---CC
Confidence            567899999999999   7788999999999999999821           0  1         89999999999   99


Q ss_pred             cEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CC
Q 039565           61 IIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GI  133 (188)
Q Consensus        61 i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~  133 (188)
                      ++||||||+||+++.++.+||+|||++................+++.|++||      ++.++|+||||+++|++++ |.
T Consensus       159 i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~  238 (322)
T 1p4o_A          159 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE  238 (322)
T ss_dssp             CBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSC
T ss_pred             CccCCCccceEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCC
Confidence            9999999999999999999999999987543222112222345677899998      6889999999999999999 78


Q ss_pred             ccccccCC------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCcc
Q 039565          134 LTVDLSFK------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGSR  184 (188)
Q Consensus       134 ~p~~~~~~------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~~  184 (188)
                      .||.....            ...+...+..+.+++..||+.+|++|||++++++.|++.....
T Consensus       239 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~  301 (322)
T 1p4o_A          239 QPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG  301 (322)
T ss_dssp             CTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTT
T ss_pred             CccccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccC
Confidence            88854211            1223345567899999999999999999999999999876653

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.4e-35  Score=228.59  Aligned_cols=164  Identities=16%  Similarity=0.243  Sum_probs=137.8

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-c-c-----------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-E-E-----------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~-~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||++++++   .+..+++|||+++++|.+++.. . .           |++.||.|||+   .+++||||||+
T Consensus        55 l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~---~givH~Dlkp~  131 (321)
T 1tki_A           55 LNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPE  131 (321)
T ss_dssp             HHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGG
T ss_pred             HHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHH
Confidence            567899999999999   7889999999999999999932 2 1           99999999999   99999999999


Q ss_pred             cEEEcc--CCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC
Q 039565           70 NILLNE--KVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK  141 (188)
Q Consensus        70 nill~~--~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~  141 (188)
                      ||+++.  ++.+|++|||++....   .........|++.|+|||      ++.++|+||||+++|+|++|..||.....
T Consensus       132 NIl~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~  208 (321)
T 1tki_A          132 NIIYQTRRSSTIKIIEFGQARQLK---PGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN  208 (321)
T ss_dssp             GEEESSSSCCCEEECCCTTCEECC---TTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH
T ss_pred             HEEEccCCCCCEEEEECCCCeECC---CCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH
Confidence            999987  7899999999997643   122334567899999999      57899999999999999999999965321


Q ss_pred             C-----------CcCH----HHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 G-----------EFDI----ISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 ~-----------~~~~----~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      .           ..+.    ..+..+.+++..||..||.+|||++++++
T Consensus       209 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~  257 (321)
T 1tki_A          209 QQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             HHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            1           1111    23567899999999999999999999998

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=4.7e-35  Score=222.90  Aligned_cols=173  Identities=23%  Similarity=0.246  Sum_probs=141.7

Q ss_pred             cccccCCCeeeeccc--CCccEEEEecCCCCChhhhcCCc-----c---------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQGKE-----E---------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~~~~-----~---------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||++++++  .+..+++|||+++++|.+++...     .         |++.||.|||+   .+++|+|+||+
T Consensus        62 l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~  138 (279)
T 1qpc_A           62 MKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAA  138 (279)
T ss_dssp             HHHCCCTTBCCEEEEECSSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGG
T ss_pred             HHhCCCcCcceEEEEEcCCCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHh
Confidence            567899999999999  77899999999999999999432     1         99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCC-
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFK-  141 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~-  141 (188)
                      ||+++.++.++|+|||.+..... ..........++..|++||      ++.++|+||||+++|+|++ |..||..... 
T Consensus       139 Nil~~~~~~~kl~Dfg~~~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~  217 (279)
T 1qpc_A          139 NILVSDTLSCKIADFGLARLIED-NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP  217 (279)
T ss_dssp             GEEECTTSCEEECCCTTCEECSS-SCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH
T ss_pred             hEEEcCCCCEEECCCcccccccC-cccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH
Confidence            99999999999999999875431 1111122334566799998      5788999999999999999 8888854221 


Q ss_pred             -----------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          142 -----------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       142 -----------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                                 ...+...+..+.+++..||+.+|++|||++++++.|+++..
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~  269 (279)
T 1qpc_A          218 EVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT  269 (279)
T ss_dssp             HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHhcccCCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence                       12223445788999999999999999999999999987653

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=4.9e-35  Score=224.95  Aligned_cols=165  Identities=20%  Similarity=0.250  Sum_probs=134.8

Q ss_pred             cccccCCCeeeeccc-----CCccEEEEecCCCCChhhhcCCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK-----QKNNALELGFRGNPELVDQQGKEE-----------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||++++++     ....++||||+++++|.++.....           |++.||.|||+   .+++||||||+
T Consensus        90 l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~  166 (298)
T 2zv2_A           90 LKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHY---QKIIHRDIKPS  166 (298)
T ss_dssp             HHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGG
T ss_pred             HHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHH
Confidence            467899999999998     356899999999999998773322           99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCCC---------CCccchHHHHHHHHHHHhCCccccccC
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTEL---------TEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~---------~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      ||+++.++.+||+|||++.....  .........|++.|+|||.         +.++|+||||+++|+|++|..||....
T Consensus       167 Nil~~~~~~~kl~Dfg~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~  244 (298)
T 2zv2_A          167 NLLVGEDGHIKIADFGVSNEFKG--SDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER  244 (298)
T ss_dssp             GEEECTTSCEEECCCTTCEECSS--SSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             HEEECCCCCEEEecCCCcccccc--ccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence            99999999999999999876432  1222344678999999992         456899999999999999999986432


Q ss_pred             C-------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          141 K-------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       141 ~-------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      .             .......+..+.+++..||+.||++|||++++++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          245 IMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             HHHHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             HHHHHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence            1             1111234567899999999999999999999875

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=4.3e-35  Score=228.37  Aligned_cols=164  Identities=22%  Similarity=0.271  Sum_probs=136.3

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++   ....++||||+++++|.+++....            |++.||.|||+   .+++||||||+|
T Consensus        68 l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~N  144 (326)
T 2y0a_A           68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPEN  144 (326)
T ss_dssp             HHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGG
T ss_pred             HHhCCCCCCCcEEEEEEeCCEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHH---CCeEcCCCCHHH
Confidence            567899999999998   778999999999999999993322            99999999999   999999999999


Q ss_pred             EEEccCC----ceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           71 ILLNEKV----QAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        71 ill~~~~----~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      |+++.++    .+||+|||++......   .......|++.|+|||      ++.++|+||||+++|+|++|..||....
T Consensus       145 Ill~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~  221 (326)
T 2y0a_A          145 IMLLDRNVPKPRIKIIDFGLAHKIDFG---NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT  221 (326)
T ss_dssp             EEESCSSSSSCCEEECCCTTCEECCTT---SCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS
T ss_pred             EEEecCCCCCCCEEEEECCCCeECCCC---CccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence            9998877    7999999998764311   1233457899999998      6789999999999999999999985432


Q ss_pred             C-----------CCcCH----HHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          141 K-----------GEFDI----ISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       141 ~-----------~~~~~----~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      .           ...+.    ..+..+.+++..||+.+|++|||++++++
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  271 (326)
T 2y0a_A          222 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  271 (326)
T ss_dssp             HHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            1           11111    23457889999999999999999999987

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=1.7e-34  Score=223.58  Aligned_cols=169  Identities=21%  Similarity=0.224  Sum_probs=135.0

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||++++++   ....++||||+++ +|.+++ ....            |++.||.|||+   .+++||||||+
T Consensus        73 l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~  148 (311)
T 3niz_A           73 LKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQ  148 (311)
T ss_dssp             HHHCCCTTBCCEEEEECCSSCEEEEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGG
T ss_pred             HHHcCCCCEeeeeeEEccCCEEEEEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCchH
Confidence            567899999999999   7788999999994 888877 3221            99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCCC
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFKG  142 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~  142 (188)
                      ||+++.++.+||+|||++......  ........++..|+|||       ++.++|+||||+++|+|++|..||......
T Consensus       149 NIl~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~  226 (311)
T 3niz_A          149 NLLINSDGALKLADFGLARAFGIP--VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDD  226 (311)
T ss_dssp             GEEECTTCCEEECCCTTCEETTSC--CC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTT
T ss_pred             hEEECCCCCEEEccCcCceecCCC--cccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChH
Confidence            999999999999999998764311  12233456788899998       577899999999999999999998643322


Q ss_pred             CcC-----------------------------------------HHHHHHHHHHHHHccCcCCCCCCCHHHHHH--HHhh
Q 039565          143 EFD-----------------------------------------IISVEKAVEIAMASVSSKVNRRPLMNQVVM--VREQ  179 (188)
Q Consensus       143 ~~~-----------------------------------------~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~--~l~~  179 (188)
                      +.-                                         ...+..+.+++..||+.||++|||++++++  .+++
T Consensus       227 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~  306 (311)
T 3niz_A          227 DQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD  306 (311)
T ss_dssp             THHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTT
T ss_pred             HHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCccccc
Confidence            110                                         012356789999999999999999999987  4444


Q ss_pred             c
Q 039565          180 G  180 (188)
Q Consensus       180 ~  180 (188)
                      +
T Consensus       307 ~  307 (311)
T 3niz_A          307 L  307 (311)
T ss_dssp             S
T ss_pred             C
Confidence            3

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=5.1e-35  Score=229.45  Aligned_cols=172  Identities=21%  Similarity=0.271  Sum_probs=140.1

Q ss_pred             cccccCCCeeeeccc-------CCccEEEEecCCCCChhhhcCCc-c-----------cHHHHHHHHhcCCCCCcEEeCC
Q 039565            6 RNKLTGPLLVELIGK-------QKNNALELGFRGNPELVDQQGKE-E-----------VCCPGLEYLHQGLKHPIIQRDM   66 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-------~~~~~lv~e~~~~~~L~~~~~~~-~-----------~i~~~l~~Lh~~~~~~i~h~dl   66 (188)
                      +..++||||++++++       ....+++|||+ +++|.+++... .           |++.||.|||+   .+++||||
T Consensus       102 ~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dl  177 (345)
T 2v62_A          102 RKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHE---NEYVHGDI  177 (345)
T ss_dssp             HHTCSCCCCCCEEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCC
T ss_pred             hccccccCcceeecccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCc
Confidence            456799999999998       35689999999 89999999432 2           99999999999   99999999


Q ss_pred             CCCcEEEccCC--ceEEecccCcccccCCCC-----CcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCC
Q 039565           67 KSTNILLNEKV--QAKLADFGQSRISPVEGG-----THMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGI  133 (188)
Q Consensus        67 ~~~nill~~~~--~~kl~d~~~~~~~~~~~~-----~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~  133 (188)
                      ||+||+++.++  .+||+|||+++.......     ........|+..|+|||      ++.++|+||||+++|+|++|.
T Consensus       178 kp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~  257 (345)
T 2v62_A          178 KAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGK  257 (345)
T ss_dssp             SGGGEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred             CHHHEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCC
Confidence            99999999877  999999999975432111     11123457889999998      688999999999999999999


Q ss_pred             ccccccCCCC-------------cCH---------HHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhcc
Q 039565          134 LTVDLSFKGE-------------FDI---------ISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGS  181 (188)
Q Consensus       134 ~p~~~~~~~~-------------~~~---------~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~  181 (188)
                      .||.......             .+.         ..+..+.+++..||+.+|++|||+++|++.|++..
T Consensus       258 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~  327 (345)
T 2v62_A          258 LPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG  327 (345)
T ss_dssp             CTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred             CCccccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence            9996532211             111         23347899999999999999999999999998754

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=6.8e-35  Score=231.97  Aligned_cols=164  Identities=22%  Similarity=0.293  Sum_probs=137.4

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc-c-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE-E-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~-~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++   ....++||||+.+|+|..++.+. .           |++.||.|||+   .+|+||||||+|
T Consensus        69 l~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~N  145 (384)
T 4fr4_A           69 MQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQN---QRIIHRDMKPDN  145 (384)
T ss_dssp             HHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGG
T ss_pred             HHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHH
Confidence            567899999999998   77899999999999999999322 2           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC---------CCCccchHHHHHHHHHHHhCCccccccCC
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE---------LTEKSDVDSFEIVILEIITGILTVDLSFK  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe---------~~~~~di~s~G~~l~~~~~g~~p~~~~~~  141 (188)
                      |+++.++.+||+|||++....   .........|++.|+|||         ++.++|+|||||++|+|++|..||.....
T Consensus       146 Ill~~~g~vkL~DFG~a~~~~---~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~  222 (384)
T 4fr4_A          146 ILLDEHGHVHITDFNIAAMLP---RETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSS  222 (384)
T ss_dssp             EEECTTSCEEECCCTTCEECC---TTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTT
T ss_pred             eEECCCCCEEEeccceeeecc---CCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCC
Confidence            999999999999999998643   122344567999999998         36689999999999999999999964322


Q ss_pred             C--------------CcCHHHHHHHHHHHHHccCcCCCCCCC-HHHHHH
Q 039565          142 G--------------EFDIISVEKAVEIAMASVSSKVNRRPL-MNQVVM  175 (188)
Q Consensus       142 ~--------------~~~~~~~~~~~~l~~~cl~~~p~~Rps-~~~i~~  175 (188)
                      .              .++...+..+.+++..||+.+|.+||+ ++++.+
T Consensus       223 ~~~~~~~~~~~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          223 TSSKEIVHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN  271 (384)
T ss_dssp             SCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred             ccHHHHHHHHhhcccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence            1              233344578899999999999999998 777664

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=1e-35  Score=231.92  Aligned_cols=175  Identities=19%  Similarity=0.255  Sum_probs=142.9

Q ss_pred             cccc-cCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc-----------------c---------cHHHHHHHHhc
Q 039565            6 RNKL-TGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE-----------------E---------VCCPGLEYLHQ   55 (188)
Q Consensus         6 l~~l-~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~-----------------~---------~i~~~l~~Lh~   55 (188)
                      +.++ +||||++++++   ....++||||+++|+|.+++...                 .         |++.||.|||+
T Consensus       103 l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~  182 (333)
T 2i1m_A          103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS  182 (333)
T ss_dssp             HHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhhcCCCCeeeEEEEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc
Confidence            4566 89999999999   77899999999999999998211                 1         99999999999


Q ss_pred             CCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHH
Q 039565           56 GLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEI  129 (188)
Q Consensus        56 ~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~  129 (188)
                         .+++|+||||+||+++.++.++|+|||++................++..|+|||      ++.++|+||||+++|+|
T Consensus       183 ---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el  259 (333)
T 2i1m_A          183 ---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI  259 (333)
T ss_dssp             ---TTEECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             ---CCcccCCcccceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHH
Confidence               999999999999999999999999999987543222222233345677899998      68899999999999999


Q ss_pred             Hh-CCccccccCCC-------------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          130 IT-GILTVDLSFKG-------------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       130 ~~-g~~p~~~~~~~-------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                      ++ |..||......             ..+...+..+.+++..||+.+|.+|||++++++.|+.....
T Consensus       260 ~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~  327 (333)
T 2i1m_A          260 FSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE  327 (333)
T ss_dssp             TTTSCCSSTTCCSSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HcCCCCCCcccchhHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence            98 88888643221             12233456789999999999999999999999999876543

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=6.7e-35  Score=223.09  Aligned_cols=173  Identities=21%  Similarity=0.247  Sum_probs=143.0

Q ss_pred             cccccCCCeeeeccc--CCccEEEEecCCCCChhhhcC-Ccc------------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQG-KEE------------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~~-~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++  .+..++||||+++++|.+++. ...            |++.||.|||+   .+++|+||+|+|
T Consensus        64 l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~N  140 (287)
T 1u59_A           64 MHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARN  140 (287)
T ss_dssp             HHHCCCTTBCCEEEEEESSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGG
T ss_pred             HHhCCCCCEeEEEEEecCCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCchhe
Confidence            567899999999999  778999999999999999982 221            99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCC-cceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCC-
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGT-HMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFK-  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~-  141 (188)
                      |+++.++.++|+|||++......... .......++..|++||      ++.++|+||||+++|++++ |..||..... 
T Consensus       141 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~  220 (287)
T 1u59_A          141 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP  220 (287)
T ss_dssp             EEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH
T ss_pred             EEEcCCCCEEECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH
Confidence            99999999999999998765322211 1122234577899998      5789999999999999998 9999864321 


Q ss_pred             -----------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhcc
Q 039565          142 -----------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGS  181 (188)
Q Consensus       142 -----------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~  181 (188)
                                 ...+...+..+.+++..||+.+|++||+++++++.|+++.
T Consensus       221 ~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  271 (287)
T 1u59_A          221 EVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY  271 (287)
T ss_dssp             HHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHhcCCcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence                       2234455678999999999999999999999999998764

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=2.8e-35  Score=228.50  Aligned_cols=174  Identities=18%  Similarity=0.229  Sum_probs=141.3

Q ss_pred             cccccCCCeeeeccc-----CCccEEEEecCCCCChhhhcCCc--c---------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK-----QKNNALELGFRGNPELVDQQGKE--E---------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~--~---------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||++++++     ....++||||+++++|.+++.+.  .         |++.||.|||+   .+++|+||||+
T Consensus        87 l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~---~~ivH~Dikp~  163 (318)
T 3lxp_A           87 LRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAAR  163 (318)
T ss_dssp             HHHCCCTTBCCEEEEEEETTTTEEEEEECCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGG
T ss_pred             HHhCCCcchhhEEEEEecCCCceEEEEEecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchh
Confidence            567899999999998     35678999999999999999332  2         99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCC-cceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC--
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGT-HMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF--  140 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~--  140 (188)
                      ||+++.++.++|+|||++......... .......++..|++||      ++.++|+||||+++|++++|..||....  
T Consensus       164 Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~  243 (318)
T 3lxp_A          164 NVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTK  243 (318)
T ss_dssp             GEEECTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH
T ss_pred             eEEEcCCCCEEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchh
Confidence            999999999999999998865322211 1223345777899998      5778999999999999999998875321  


Q ss_pred             -------------------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          141 -------------------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       141 -------------------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                                               ....+...+..+.+++..||+.+|++|||++++++.|+.+.+
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~  310 (318)
T 3lxp_A          244 FLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHE  310 (318)
T ss_dssp             HHHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hhhhhcccccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence                                     112233455689999999999999999999999999988754

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=1.6e-34  Score=225.14  Aligned_cols=171  Identities=16%  Similarity=0.193  Sum_probs=140.3

Q ss_pred             cccc-cCCCeeeeccc---CCccEEEEecCCCCChhhhcC--Ccc-----------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKL-TGPLLVELIGK---QKNNALELGFRGNPELVDQQG--KEE-----------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l-~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~--~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +.++ +||||++++++   ....++||||+ +++|.+++.  ...           |++.||.|||+   .+++||||||
T Consensus        58 l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~iiHrDlkp  133 (330)
T 2izr_A           58 YKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHS---KNLIYRDVKP  133 (330)
T ss_dssp             HHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCG
T ss_pred             HHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCH
Confidence            4566 89999999999   77889999999 899999983  222           99999999999   9999999999


Q ss_pred             CcEEEccCCc-----eEEecccCcccccCCCCCc-----ceeeecccccccCCC------CCCccchHHHHHHHHHHHhC
Q 039565           69 TNILLNEKVQ-----AKLADFGQSRISPVEGGTH-----MSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITG  132 (188)
Q Consensus        69 ~nill~~~~~-----~kl~d~~~~~~~~~~~~~~-----~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g  132 (188)
                      +||+++.++.     +||+|||+++.........     ......|++.|+|||      ++.++|+||||+++|+|++|
T Consensus       134 ~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g  213 (330)
T 2izr_A          134 ENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRG  213 (330)
T ss_dssp             GGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHS
T ss_pred             HHeeeccCCCCCCceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcC
Confidence            9999998876     9999999998643222111     123567899999998      67899999999999999999


Q ss_pred             CccccccCCCCc--------------CHH-----HHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhcc
Q 039565          133 ILTVDLSFKGEF--------------DII-----SVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGS  181 (188)
Q Consensus       133 ~~p~~~~~~~~~--------------~~~-----~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~  181 (188)
                      ..||........              +..     .+ .+.+++..||+.+|.+||++++|++.|+.+.
T Consensus       214 ~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~  280 (330)
T 2izr_A          214 SLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLF  280 (330)
T ss_dssp             SCTTTTCCCSSHHHHHHHHHHHHHHSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred             CCCccccccccHHHHHHHHHhhhccCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHH
Confidence            999976433221              111     22 8899999999999999999999999997664

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=1.8e-35  Score=233.02  Aligned_cols=161  Identities=21%  Similarity=0.275  Sum_probs=131.8

Q ss_pred             cCCCeeeeccc---CCccEEEEecCCCCChhhhcCC---cc---------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEc
Q 039565           10 TGPLLVELIGK---QKNNALELGFRGNPELVDQQGK---EE---------VCCPGLEYLHQGLKHPIIQRDMKSTNILLN   74 (188)
Q Consensus        10 ~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~---~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~   74 (188)
                      +||||++++++   .+..++||||+++|+|..++.+   ..         |++.||+|||+   .+|+||||||+||+++
T Consensus        82 ~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NILl~  158 (353)
T 3txo_A           82 NHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHD---KGIIYRDLKLDNVLLD  158 (353)
T ss_dssp             TCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEEC
T ss_pred             CCCceeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCCHHHEEEC
Confidence            79999999999   7889999999999999999822   22         99999999999   9999999999999999


Q ss_pred             cCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC-------
Q 039565           75 EKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK-------  141 (188)
Q Consensus        75 ~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~-------  141 (188)
                      .++.+||+|||+++...  ..........|++.|+|||      ++.++|+||||+++|+|++|..||.....       
T Consensus       159 ~~g~ikL~DFG~a~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i  236 (353)
T 3txo_A          159 HEGHCKLADFGMCKEGI--CNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAI  236 (353)
T ss_dssp             TTSCEEECCCTTCBCSC--C---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             CCCCEEEccccceeecc--cCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            99999999999987432  1222344568999999999      79999999999999999999999965321       


Q ss_pred             ----CCcCHHHHHHHHHHHHHccCcCCCCCCCH------HHHHH
Q 039565          142 ----GEFDIISVEKAVEIAMASVSSKVNRRPLM------NQVVM  175 (188)
Q Consensus       142 ----~~~~~~~~~~~~~l~~~cl~~~p~~Rps~------~~i~~  175 (188)
                          ..++...+..+.+++..||+.+|++||++      +++++
T Consensus       237 ~~~~~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~  280 (353)
T 3txo_A          237 LNDEVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR  280 (353)
T ss_dssp             HHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred             HcCCCCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence                12333456778999999999999999998      67765

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=4.2e-35  Score=226.51  Aligned_cols=175  Identities=21%  Similarity=0.196  Sum_probs=142.9

Q ss_pred             cccc-cCCCeeeeccc----CCccEEEEecCCCCChhhhc-CCc------------------c---------cHHHHHHH
Q 039565            6 RNKL-TGPLLVELIGK----QKNNALELGFRGNPELVDQQ-GKE------------------E---------VCCPGLEY   52 (188)
Q Consensus         6 l~~l-~Hpniv~~~~~----~~~~~lv~e~~~~~~L~~~~-~~~------------------~---------~i~~~l~~   52 (188)
                      +.++ +||||++++++    ....++++||+++++|.+++ ...                  .         |++.||.|
T Consensus        84 l~~l~~hp~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~  163 (316)
T 2xir_A           84 LIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEF  163 (316)
T ss_dssp             HHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHH
T ss_pred             HHhcccCCCeeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHH
Confidence            3455 69999999998    44589999999999999999 221                  1         89999999


Q ss_pred             HhcCCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHH
Q 039565           53 LHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVI  126 (188)
Q Consensus        53 Lh~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l  126 (188)
                      ||+   .+++|+||||+||+++.++.+||+|||++................++..|+|||      ++.++|+||||+++
T Consensus       164 lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il  240 (316)
T 2xir_A          164 LAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL  240 (316)
T ss_dssp             HHH---TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred             HHh---CCcccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHH
Confidence            999   999999999999999999999999999987543222222333456778899998      68899999999999


Q ss_pred             HHHHh-CCccccccCC-------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          127 LEIIT-GILTVDLSFK-------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       127 ~~~~~-g~~p~~~~~~-------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                      |++++ |..||.....             ...+...+..+.+++..||+.+|.+|||++++++.|+.+...
T Consensus       241 ~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  311 (316)
T 2xir_A          241 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  311 (316)
T ss_dssp             HHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHhCCCCCCcccchhHHHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence            99998 9999864322             112233456899999999999999999999999999887654

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=1.5e-35  Score=226.48  Aligned_cols=169  Identities=18%  Similarity=0.167  Sum_probs=136.2

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc---c---------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE---E---------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~---~---------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||++++++   .+..++||||+++++|.+++ ...   .         |++.||.|||+   .+++||||||+
T Consensus        66 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~  142 (289)
T 4fvq_A           66 MSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEE---NTLIHGNVCAK  142 (289)
T ss_dssp             HHTSCCTTBCCEEEEECCTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGG
T ss_pred             HHhCCCCCEeEEEEEEEeCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhh---CCeECCCcCcc
Confidence            567899999999999   77889999999999999999 222   1         99999999999   99999999999


Q ss_pred             cEEEccCCc--------eEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCC-
Q 039565           70 NILLNEKVQ--------AKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGI-  133 (188)
Q Consensus        70 nill~~~~~--------~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~-  133 (188)
                      ||+++.++.        ++++|||++....      ......++..|+|||       ++.++|+||||+++|+|++|. 
T Consensus       143 NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~  216 (289)
T 4fvq_A          143 NILLIREEDRKTGNPPFIKLSDPGISITVL------PKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGD  216 (289)
T ss_dssp             GEEEEECCBGGGTBCCEEEECCCCSCTTTS------CHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTC
T ss_pred             eEEEecCCcccccccceeeeccCccccccc------CccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCC
Confidence            999998876        9999999886432      122345778899998       577899999999999999965 


Q ss_pred             ccccccC----------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          134 LTVDLSF----------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       134 ~p~~~~~----------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                      .|+....          ....+...+..+.+++..||+.+|++|||++++++.|+++..+
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p  276 (289)
T 4fvq_A          217 KPLSALDSQRKLQFYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP  276 (289)
T ss_dssp             CTTTTSCHHHHHHHHHTTCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred             CCccccchHHHHHHhhccCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence            4443211          1111222345688999999999999999999999999988654

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=2.5e-35  Score=224.36  Aligned_cols=173  Identities=23%  Similarity=0.246  Sum_probs=137.6

Q ss_pred             cccccCCCeeeeccc----CCccEEEEecCCCCChhhhcCC-----cc---------cHHHHHHHHhcCCCCCcEEeCCC
Q 039565            6 RNKLTGPLLVELIGK----QKNNALELGFRGNPELVDQQGK-----EE---------VCCPGLEYLHQGLKHPIIQRDMK   67 (188)
Q Consensus         6 l~~l~Hpniv~~~~~----~~~~~lv~e~~~~~~L~~~~~~-----~~---------~i~~~l~~Lh~~~~~~i~h~dl~   67 (188)
                      +.+++||||++++++    ....++++||+++++|.+++..     ..         |++.||.|||+   .+++|+|+|
T Consensus        68 l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlk  144 (278)
T 1byg_A           68 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLA  144 (278)
T ss_dssp             HTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCS
T ss_pred             HHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHh---CCccccCCC
Confidence            567899999999997    4578999999999999999822     11         99999999999   999999999


Q ss_pred             CCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccC
Q 039565           68 STNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSF  140 (188)
Q Consensus        68 ~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~  140 (188)
                      |+||+++.++.++|+|||++.....     ......++..|++||      ++.++|+||||+++|++++ |..||....
T Consensus       145 p~Nil~~~~~~~~l~Dfg~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~  219 (278)
T 1byg_A          145 ARNVLVSEDNVAKVSDFGLTKEASS-----TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP  219 (278)
T ss_dssp             GGGEEECTTSCEEECCCCC-----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC
T ss_pred             cceEEEeCCCcEEEeeccccccccc-----cccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCC
Confidence            9999999999999999998874321     112235677899998      6889999999999999998 998886432


Q ss_pred             C------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCccee
Q 039565          141 K------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGSRIT  186 (188)
Q Consensus       141 ~------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~~~~  186 (188)
                      .            ...+...+..+.+++..||+.+|++|||+.++++.|+.+...++.
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~~~  277 (278)
T 1byg_A          220 LKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHELH  277 (278)
T ss_dssp             GGGHHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCC-
T ss_pred             HHHHHHHHhcCCCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhhcc
Confidence            1            122334567899999999999999999999999999998876654

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=4.7e-35  Score=223.67  Aligned_cols=173  Identities=24%  Similarity=0.249  Sum_probs=142.7

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-C-Ccc------------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-G-KEE------------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~-~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +.+++||||++++++   ....++||||+++++|.+++ . ...            |++.||.|||+   .+++|+|+||
T Consensus        63 l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp  139 (288)
T 3kfa_A           63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAA  139 (288)
T ss_dssp             HHHCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHH---HTCCCSCCSG
T ss_pred             HHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHH---CCccCCCCCc
Confidence            567899999999999   77889999999999999999 2 111            99999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCC
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFK  141 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~  141 (188)
                      +||+++.++.++|+|||.+.... ...........++..|++||      ++.++|+||||+++|++++ |..||.....
T Consensus       140 ~Nil~~~~~~~~l~Dfg~~~~~~-~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~  218 (288)
T 3kfa_A          140 RNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL  218 (288)
T ss_dssp             GGEEECGGGCEEECCCCGGGTSC-SSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred             ceEEEcCCCCEEEccCccceecc-CCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence            99999999999999999987543 22222233345677899998      6889999999999999999 8888854321


Q ss_pred             ------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          142 ------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       142 ------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                                  ...+...+..+.+++..||+.+|.+|||++++++.|+.+..
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~  271 (288)
T 3kfa_A          219 SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ  271 (288)
T ss_dssp             GGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHhccCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHH
Confidence                        22333456789999999999999999999999999987654

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=9.3e-35  Score=226.87  Aligned_cols=174  Identities=20%  Similarity=0.207  Sum_probs=142.2

Q ss_pred             cccc-cCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc------------------c---------cHHHHHHHH
Q 039565            6 RNKL-TGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE------------------E---------VCCPGLEYL   53 (188)
Q Consensus         6 l~~l-~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~------------------~---------~i~~~l~~L   53 (188)
                      +.++ +||||++++++   .+..++||||+++++|.+++ ...                  .         |++.||.||
T Consensus        94 l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L  173 (334)
T 2pvf_A           94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYL  173 (334)
T ss_dssp             HHHHCCCTTBCCEEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhcCCCEeeEEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHH
Confidence            3456 89999999998   77899999999999999998 221                  1         999999999


Q ss_pred             hcCCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHH
Q 039565           54 HQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVIL  127 (188)
Q Consensus        54 h~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~  127 (188)
                      |+   .+++|+||||+||+++.++.+||+|||++................+++.|++||      ++.++|+||||+++|
T Consensus       174 H~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  250 (334)
T 2pvf_A          174 AS---QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMW  250 (334)
T ss_dssp             HH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHH
T ss_pred             Hh---CCeeCCCCccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHH
Confidence            99   999999999999999999999999999987543222212223345677899999      588999999999999


Q ss_pred             HHHh-CCccccccCC------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          128 EIIT-GILTVDLSFK------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       128 ~~~~-g~~p~~~~~~------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                      ++++ |..||.....            ...+...+..+.+++..||+.+|.+|||++++++.|+.+..
T Consensus       251 ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~  318 (334)
T 2pvf_A          251 EIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT  318 (334)
T ss_dssp             HHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHhCCCCCcCcCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            9999 8888854221            12233455688999999999999999999999999988754

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=6e-35  Score=225.75  Aligned_cols=175  Identities=21%  Similarity=0.239  Sum_probs=135.2

Q ss_pred             cccccCCCeeeeccc---C-----CccEEEEecCCCCChhhhc--CC----c---c---------cHHHHHHHHhcCCCC
Q 039565            6 RNKLTGPLLVELIGK---Q-----KNNALELGFRGNPELVDQQ--GK----E---E---------VCCPGLEYLHQGLKH   59 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~-----~~~~lv~e~~~~~~L~~~~--~~----~---~---------~i~~~l~~Lh~~~~~   59 (188)
                      +.+++||||++++++   .     ...++++||+++++|.+++  ..    .   .         |++.||.|||+   .
T Consensus        90 l~~l~h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~  166 (313)
T 3brb_A           90 MKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN---R  166 (313)
T ss_dssp             HHTCCCTTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHT---T
T ss_pred             HhcCCCCCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh---C
Confidence            567899999999998   2     2459999999999999998  11    1   1         99999999999   9


Q ss_pred             CcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-C
Q 039565           60 PIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-G  132 (188)
Q Consensus        60 ~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g  132 (188)
                      +++|+||||+||+++.++.+||+|||++................+++.|++||      ++.++|+||||+++|+|++ |
T Consensus       167 ~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g  246 (313)
T 3brb_A          167 NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRG  246 (313)
T ss_dssp             TCCCCCCSGGGEEECTTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTS
T ss_pred             CcccCCCCcceEEEcCCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcC
Confidence            99999999999999999999999999987543222222223345677899988      5789999999999999999 8


Q ss_pred             CccccccCC------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          133 ILTVDLSFK------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       133 ~~p~~~~~~------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                      ..||.....            ...+...+..+.+++..||+.+|.+|||++++++.|+.+..+
T Consensus       247 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~  309 (313)
T 3brb_A          247 MTPYPGVQNHEMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES  309 (313)
T ss_dssp             CCSSTTCCGGGHHHHHHTTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCCccCCHHHHHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence            888854322            123334557899999999999999999999999999987654

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=8.4e-35  Score=222.94  Aligned_cols=174  Identities=20%  Similarity=0.228  Sum_probs=141.7

Q ss_pred             cccccCCCeeeeccc--CCccEEEEecCCCCChhhhc-CCc--c---------cHHHHHHHHhcCCCCCcEEeCCCCCcE
Q 039565            6 RNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQ-GKE--E---------VCCPGLEYLHQGLKHPIIQRDMKSTNI   71 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~-~~~--~---------~i~~~l~~Lh~~~~~~i~h~dl~~~ni   71 (188)
                      +.+++||||++++++  .+..++++||+++++|.+++ ...  .         |++.||.|||+   .+++|+||||+||
T Consensus        72 l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Ni  148 (291)
T 1xbb_A           72 MQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNV  148 (291)
T ss_dssp             HHTCCCTTBCCEEEEEESSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGE
T ss_pred             HHhCCCCCEEEEEEEECCCCcEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHh---CCeEcCCCCcceE
Confidence            567899999999999  78889999999999999999 222  2         99999999999   9999999999999


Q ss_pred             EEccCCceEEecccCcccccCCCCCc-ceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccC---
Q 039565           72 LLNEKVQAKLADFGQSRISPVEGGTH-MSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSF---  140 (188)
Q Consensus        72 ll~~~~~~kl~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~---  140 (188)
                      +++.++.++|+|||++.......... ......++..|++||      ++.++|+||||+++|++++ |..||....   
T Consensus       149 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~  228 (291)
T 1xbb_A          149 LLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE  228 (291)
T ss_dssp             EEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH
T ss_pred             EEeCCCcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence            99999999999999987643222111 112234567799998      5778999999999999999 999986432   


Q ss_pred             ---------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          141 ---------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       141 ---------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                               ....+...+..+.+++..||+.+|.+|||++++++.|+++..
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~  279 (291)
T 1xbb_A          229 VTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY  279 (291)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence                     122334456789999999999999999999999999987654

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=9.6e-35  Score=231.90  Aligned_cols=161  Identities=20%  Similarity=0.258  Sum_probs=134.0

Q ss_pred             cCCCeeeeccc---CCccEEEEecCCCCChhhhcCC---cc---------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEc
Q 039565           10 TGPLLVELIGK---QKNNALELGFRGNPELVDQQGK---EE---------VCCPGLEYLHQGLKHPIIQRDMKSTNILLN   74 (188)
Q Consensus        10 ~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~---~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~   74 (188)
                      +||||++++++   ....++||||+++|+|..++.+   ..         |++.||.|||+   .+|+||||||+||+++
T Consensus       111 ~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~  187 (396)
T 4dc2_A          111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLD  187 (396)
T ss_dssp             TCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEEC
T ss_pred             CCCCcCeeEEEEEECCEEEEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEEC
Confidence            89999999998   7889999999999999998822   22         99999999999   9999999999999999


Q ss_pred             cCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC-------
Q 039565           75 EKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK-------  141 (188)
Q Consensus        75 ~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~-------  141 (188)
                      .++.+||+|||+++...  ..........||+.|+|||      ++.++|+|||||++|+|++|..||+....       
T Consensus       188 ~~g~ikL~DFGla~~~~--~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~  265 (396)
T 4dc2_A          188 SEGHIKLTDYGMCKEGL--RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN  265 (396)
T ss_dssp             TTSCEEECCCTTCBCCC--CTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------C
T ss_pred             CCCCEEEeecceeeecc--cCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchh
Confidence            99999999999987532  1222345578999999999      68899999999999999999999953211       


Q ss_pred             -------------CCcCHHHHHHHHHHHHHccCcCCCCCCCH------HHHHH
Q 039565          142 -------------GEFDIISVEKAVEIAMASVSSKVNRRPLM------NQVVM  175 (188)
Q Consensus       142 -------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~------~~i~~  175 (188)
                                   ..++...+..+.+++..||+.||.+||++      ++|++
T Consensus       266 ~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~  318 (396)
T 4dc2_A          266 TEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG  318 (396)
T ss_dssp             CHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHH
T ss_pred             hHHHHHHHHhccccCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhc
Confidence                         11233345678999999999999999985      56654

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=7.6e-35  Score=223.38  Aligned_cols=172  Identities=14%  Similarity=0.147  Sum_probs=139.7

Q ss_pred             ccc-cCCCeeeeccc---CCccEEEEecCCCCChhhhcC--Cc--c---------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            7 NKL-TGPLLVELIGK---QKNNALELGFRGNPELVDQQG--KE--E---------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         7 ~~l-~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~--~~--~---------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      .++ +|+|+++++++   ....+++|||+ +++|.+++.  ..  .         |++.||.|||+   .+++||||||+
T Consensus        60 ~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~  135 (298)
T 1csn_A           60 KLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPD  135 (298)
T ss_dssp             HHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGG
T ss_pred             HHHhcCCCCCeEEeecCCCceeEEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHH
Confidence            445 79999999988   77889999999 899999992  22  2         99999999999   99999999999


Q ss_pred             cEEEccCCc-----eEEecccCcccccCCCCC-----cceeeecccccccCCC------CCCccchHHHHHHHHHHHhCC
Q 039565           70 NILLNEKVQ-----AKLADFGQSRISPVEGGT-----HMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGI  133 (188)
Q Consensus        70 nill~~~~~-----~kl~d~~~~~~~~~~~~~-----~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~  133 (188)
                      ||+++.++.     ++|+|||++.........     .......|+..|+|||      ++.++|+||||+++|+|++|.
T Consensus       136 NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~  215 (298)
T 1csn_A          136 NFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGS  215 (298)
T ss_dssp             GEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSS
T ss_pred             HEEeccCCCCCCCeEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCC
Confidence            999987765     999999999865422221     1233467889999998      578899999999999999999


Q ss_pred             ccccccCCCCc--------------C-----HHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          134 LTVDLSFKGEF--------------D-----IISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       134 ~p~~~~~~~~~--------------~-----~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                      .||........              +     ...+..+.+++..||+.+|++|||+++|++.|+++..
T Consensus       216 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~  283 (298)
T 1csn_A          216 LPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLE  283 (298)
T ss_dssp             CTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred             CCcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHH
Confidence            99976432210              0     1234578999999999999999999999999987654

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=4.2e-35  Score=225.34  Aligned_cols=173  Identities=17%  Similarity=0.196  Sum_probs=139.5

Q ss_pred             cccccCCCeeeeccc-----CCccEEEEecCCCCChhhhc-CC---cc---------cHHHHHHHHhcCCCCCcEEeCCC
Q 039565            6 RNKLTGPLLVELIGK-----QKNNALELGFRGNPELVDQQ-GK---EE---------VCCPGLEYLHQGLKHPIIQRDMK   67 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-----~~~~~lv~e~~~~~~L~~~~-~~---~~---------~i~~~l~~Lh~~~~~~i~h~dl~   67 (188)
                      +.+++||||++++++     ....+++|||+++++|.+++ ..   ..         |++.||.|||+   .+++|+|+|
T Consensus        77 l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dik  153 (302)
T 4e5w_A           77 LRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLA  153 (302)
T ss_dssp             HHTCCCTTBCCEEEEEEC---CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCS
T ss_pred             HHhCCCCCeeeeeeEEecCCCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhc---CCcccCCCc
Confidence            567899999999998     26689999999999999998 22   11         99999999999   999999999


Q ss_pred             CCcEEEccCCceEEecccCcccccCCCCC-cceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           68 STNILLNEKVQAKLADFGQSRISPVEGGT-HMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        68 ~~nill~~~~~~kl~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      |+||+++.++.++|+|||++......... .......++..|++||      ++.++|+||||+++|++++|..|+....
T Consensus       154 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  233 (302)
T 4e5w_A          154 ARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPM  233 (302)
T ss_dssp             GGGEEEEETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHH
T ss_pred             hheEEEcCCCCEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchh
Confidence            99999999999999999998765322211 1223356777899999      5778999999999999999987653211


Q ss_pred             ---------------------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhcc
Q 039565          141 ---------------------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGS  181 (188)
Q Consensus       141 ---------------------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~  181 (188)
                                                 ....+...+..+.+++..||+.+|.+|||++++++.|+.+.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll  301 (302)
T 4e5w_A          234 ALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL  301 (302)
T ss_dssp             HHHHHHHCSCCGGGHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hHHhhccCCcccccCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence                                       11122344567899999999999999999999999998763

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=4.4e-35  Score=246.20  Aligned_cols=173  Identities=20%  Similarity=0.243  Sum_probs=140.1

Q ss_pred             cccccCCCeeeeccc--CCccEEEEecCCCCChhhhc-CCc--c---------cHHHHHHHHhcCCCCCcEEeCCCCCcE
Q 039565            6 RNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQ-GKE--E---------VCCPGLEYLHQGLKHPIIQRDMKSTNI   71 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~-~~~--~---------~i~~~l~~Lh~~~~~~i~h~dl~~~ni   71 (188)
                      |.+++||||++++++  .+..++||||+++|+|.+++ ...  .         |++.||.|||+   .+|+||||||+||
T Consensus       424 l~~l~hpnIv~l~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~---~~iiHrDLkp~NI  500 (635)
T 4fl3_A          424 MQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNV  500 (635)
T ss_dssp             HHHCCCTTBCCEEEEEESSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGE
T ss_pred             HHhCCCCCEeeEEEEEecCCEEEEEEccCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeCCCCChHhE
Confidence            567899999999999  77789999999999999999 222  1         99999999999   9999999999999


Q ss_pred             EEccCCceEEecccCcccccCCCCC-cceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccC---
Q 039565           72 LLNEKVQAKLADFGQSRISPVEGGT-HMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSF---  140 (188)
Q Consensus        72 ll~~~~~~kl~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~---  140 (188)
                      +++.++.+||+|||+++........ .......++..|+|||      ++.++||||||+++|+|++ |..||....   
T Consensus       501 Ll~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~  580 (635)
T 4fl3_A          501 LLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE  580 (635)
T ss_dssp             EEEETTEEEECCTTHHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH
T ss_pred             EEeCCCCEEEEEcCCccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            9999999999999998765322111 1222345667899998      6889999999999999998 999985422   


Q ss_pred             ---------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhcc
Q 039565          141 ---------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGS  181 (188)
Q Consensus       141 ---------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~  181 (188)
                               ....+...+..+.+++..||+.+|++||++++|++.|+...
T Consensus       581 ~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~  630 (635)
T 4fl3_A          581 VTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY  630 (635)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence                     12234456678999999999999999999999999998764

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=1.3e-34  Score=228.82  Aligned_cols=164  Identities=21%  Similarity=0.270  Sum_probs=135.5

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++   ....++||||+++|+|.+++ .+..           |++.||.|||+   .+++||||||+|
T Consensus        82 l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~N  158 (362)
T 2bdw_A           82 CRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPEN  158 (362)
T ss_dssp             HHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGG
T ss_pred             HHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHH
Confidence            467899999999998   77889999999999999988 3222           99999999999   999999999999


Q ss_pred             EEEccC---CceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC
Q 039565           71 ILLNEK---VQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK  141 (188)
Q Consensus        71 ill~~~---~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~  141 (188)
                      |+++.+   +.+||+|||++....   .........|++.|+|||      ++.++|+||||+++|+|++|..||.....
T Consensus       159 Ill~~~~~~~~~kl~DfG~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~  235 (362)
T 2bdw_A          159 LLLASKAKGAAVKLADFGLAIEVN---DSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ  235 (362)
T ss_dssp             EEESCSSTTCCEEECCCTTCBCCT---TCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             EEEecCCCCCCEEEeecCcceEec---CCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH
Confidence            999865   459999999987543   112233467899999998      68899999999999999999999854221


Q ss_pred             ---------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 ---------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 ---------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                     .......+..+.+++..||+.||++|||++++++
T Consensus       236 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  284 (362)
T 2bdw_A          236 HRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK  284 (362)
T ss_dssp             HHHHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence                           1111234678899999999999999999999886

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=8.5e-35  Score=227.23  Aligned_cols=174  Identities=22%  Similarity=0.255  Sum_probs=136.0

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc-c-----------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE-E-----------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~-~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||++++++   ....++||||+++++|.+++ ... .           |++.||.|||+   .+++|+||||+
T Consensus       100 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~  176 (333)
T 1mqb_A          100 MGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAAR  176 (333)
T ss_dssp             HHTCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGG
T ss_pred             HHhCCCCCCCcEEEEEecCCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChh
Confidence            567899999999999   77889999999999999999 221 1           99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCC-cceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccC-
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGT-HMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSF-  140 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~-  140 (188)
                      ||+++.++.+||+|||++......... .......++..|++||      ++.++|+||||+++|++++ |..||.... 
T Consensus       177 NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~  256 (333)
T 1mqb_A          177 NILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN  256 (333)
T ss_dssp             GEEECTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH
T ss_pred             eEEECCCCcEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH
Confidence            999999999999999998754321111 1112234566799998      5788999999999999998 999885321 


Q ss_pred             -----------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          141 -----------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       141 -----------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                                 ....+...+..+.+++..||+.+|++||+++++++.|+++..
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~  309 (333)
T 1mqb_A          257 HEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR  309 (333)
T ss_dssp             HHHHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence                       112233456789999999999999999999999999987654

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.4e-34  Score=221.83  Aligned_cols=175  Identities=21%  Similarity=0.231  Sum_probs=138.4

Q ss_pred             cccccCCCeeeeccc---CC-ccEEEEecCCCCChhhhcCC-cc------------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK---QK-NNALELGFRGNPELVDQQGK-EE------------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~-~~~lv~e~~~~~~L~~~~~~-~~------------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +++++||||++++++   .+ ..++++||+.+++|.+++.. ..            |++.||.|||+   .+++|+|+||
T Consensus        76 l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp  152 (298)
T 3pls_A           76 MRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAE---QKFVHRDLAA  152 (298)
T ss_dssp             HHTCCCTTBCCCCEEECCSSSCCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSG
T ss_pred             HHhCCCCCeeeEEEEEecCCCCcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCc
Confidence            567899999999998   33 34899999999999999922 21            99999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCC--CCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCcc-cccc
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEG--GTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILT-VDLS  139 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p-~~~~  139 (188)
                      +||+++.++.++|+|||+++......  .........++..|++||      ++.++|+||||+++|++++|..| +...
T Consensus       153 ~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~  232 (298)
T 3pls_A          153 RNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI  232 (298)
T ss_dssp             GGEEECTTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS
T ss_pred             ceEEEcCCCcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccC
Confidence            99999999999999999987542111  111223346677899988      57889999999999999996544 4321


Q ss_pred             CC------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          140 FK------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       140 ~~------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                      ..            ...+...+..+.+++..||+.+|.+|||++++++.|+++...
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~  288 (298)
T 3pls_A          233 DPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSA  288 (298)
T ss_dssp             CGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHhhcCCCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            11            122334456899999999999999999999999999887543

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=1e-34  Score=236.53  Aligned_cols=164  Identities=20%  Similarity=0.309  Sum_probs=138.5

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      ++.++||||++++++   ....++||||+++|+|.+++.+.+            |++.||.|||+   .+++||||||+|
T Consensus        70 l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDLkp~N  146 (476)
T 2y94_A           70 LKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHR---HMVVHRDLKPEN  146 (476)
T ss_dssp             HTTCCCTTBCCEEEEEECSSEEEEEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGG
T ss_pred             HHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcccccHHH
Confidence            567899999999999   788999999999999999993322            99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCCC-
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFKG-  142 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~-  142 (188)
                      |+++.++.+||+|||++.....   ........|++.|+|||       .+.++|+||||+++|+|++|..||+..... 
T Consensus       147 Ill~~~~~vkL~DFG~a~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~  223 (476)
T 2y94_A          147 VLLDAHMNAKIADFGLSNMMSD---GEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPT  223 (476)
T ss_dssp             EEECTTCCEEECCCSSCEECCT---TCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHH
T ss_pred             EEEecCCCeEEEeccchhhccc---cccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHH
Confidence            9999999999999999886431   12234457899999999       256899999999999999999999754221 


Q ss_pred             ----------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          143 ----------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       143 ----------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                ..+...+..+.+++..||+.||.+|||++++++
T Consensus       224 ~~~~i~~~~~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~  266 (476)
T 2y94_A          224 LFKKICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIRE  266 (476)
T ss_dssp             HHHHHHTTCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHhcCCcCCCccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence                      122234567899999999999999999999997

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=1.5e-34  Score=230.07  Aligned_cols=168  Identities=14%  Similarity=0.163  Sum_probs=134.3

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CC--cc-----------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GK--EE-----------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~--~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +++++||||++++++   .+..++||||+++++|.+++ ..  ..           |++.||.|||+   .+|+||||||
T Consensus        80 l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp  156 (389)
T 3gni_B           80 SKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHH---MGYVHRSVKA  156 (389)
T ss_dssp             HHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSG
T ss_pred             HHhCCCCCCCcEeEEEEECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCH
Confidence            567899999999998   78899999999999999998 22  11           99999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCC-----CcceeeecccccccCCC--------CCCccchHHHHHHHHHHHhCCcc
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGG-----THMSTTIAGTAGFLNTE--------LTEKSDVDSFEIVILEIITGILT  135 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~-----~~~~~~~~~~~~~~~pe--------~~~~~di~s~G~~l~~~~~g~~p  135 (188)
                      +||+++.++.+|++|||.+........     ........|+..|+|||        ++.++|+|||||++|+|++|..|
T Consensus       157 ~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~p  236 (389)
T 3gni_B          157 SHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVP  236 (389)
T ss_dssp             GGEEECTTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             HHEEEcCCCCEEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCC
Confidence            999999999999999998764321111     11122346788899998        46789999999999999999999


Q ss_pred             ccccCCCC---------------------------------------------------------cCHHHHHHHHHHHHH
Q 039565          136 VDLSFKGE---------------------------------------------------------FDIISVEKAVEIAMA  158 (188)
Q Consensus       136 ~~~~~~~~---------------------------------------------------------~~~~~~~~~~~l~~~  158 (188)
                      |.......                                                         .....+..+.+++..
T Consensus       237 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~  316 (389)
T 3gni_B          237 FKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQ  316 (389)
T ss_dssp             TTTCCSTTHHHHC--------------------------------------------------------CCHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHH
Confidence            86432111                                                         111234568899999


Q ss_pred             ccCcCCCCCCCHHHHHHH
Q 039565          159 SVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       159 cl~~~p~~Rps~~~i~~~  176 (188)
                      ||+.||++|||++++++.
T Consensus       317 ~L~~dP~~Rpta~ell~h  334 (389)
T 3gni_B          317 CLQRNPDARPSASTLLNH  334 (389)
T ss_dssp             HTCSCTTTSCCHHHHTTS
T ss_pred             HhhcCcccCCCHHHHhcC
Confidence            999999999999999863

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=8.8e-35  Score=226.07  Aligned_cols=162  Identities=25%  Similarity=0.384  Sum_probs=136.9

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc--c---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE--E---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~--~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      ++.++||||++++++   ....++||||+++|+|.+++ ...  .         |++.||.|||+   .+++||||||+|
T Consensus        60 l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~N  136 (318)
T 1fot_A           60 LSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPEN  136 (318)
T ss_dssp             HHSCCBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGG
T ss_pred             HhhCCCCCCceEeEEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChhe
Confidence            456899999999999   77899999999999999999 222  2         99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC---
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK---  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~---  141 (188)
                      |+++.++.+||+|||+++....     ......|++.|+|||      ++.++|+||||+++|+|++|..||.....   
T Consensus       137 Ill~~~g~~kL~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~  211 (318)
T 1fot_A          137 ILLDKNGHIKITDFGFAKYVPD-----VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT  211 (318)
T ss_dssp             EEECTTSCEEECCCSSCEECSS-----CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred             EEEcCCCCEEEeecCcceecCC-----ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH
Confidence            9999999999999999875421     233467899999998      68899999999999999999999854321   


Q ss_pred             --------CCcCHHHHHHHHHHHHHccCcCCCCCC-----CHHHHHH
Q 039565          142 --------GEFDIISVEKAVEIAMASVSSKVNRRP-----LMNQVVM  175 (188)
Q Consensus       142 --------~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~i~~  175 (188)
                              ..++...+..+.+++..|++.+|.+||     +++++++
T Consensus       212 ~~~i~~~~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~  258 (318)
T 1fot_A          212 YEKILNAELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  258 (318)
T ss_dssp             HHHHHHCCCCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence                    122334456889999999999999999     8888875

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=2.5e-35  Score=243.51  Aligned_cols=174  Identities=22%  Similarity=0.239  Sum_probs=142.8

Q ss_pred             cccccCCCeeeeccc--CCccEEEEecCCCCChhhhcCC-----cc---------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQGK-----EE---------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~~~-----~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      |.+++||||++++++  .+..++||||+++|+|.+++..     ..         |++.||.|||+   .+++||||||+
T Consensus       316 l~~l~hpniv~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~  392 (535)
T 2h8h_A          316 MKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAA  392 (535)
T ss_dssp             HHHCCCTTBCCEEEEECSSSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGG
T ss_pred             HHhCCCCCEeeEEEEEeeccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHh
Confidence            567899999999999  7789999999999999999932     11         99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccC--
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSF--  140 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~--  140 (188)
                      ||+++.++.+||+|||+++.... ..........++..|++||      ++.++||||||+++|+|++ |..||....  
T Consensus       393 NIll~~~~~~kl~DFG~a~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~  471 (535)
T 2h8h_A          393 NILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR  471 (535)
T ss_dssp             GEEECGGGCEEECCTTSTTTCCC-HHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH
T ss_pred             hEEEcCCCcEEEcccccceecCC-CceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence            99999999999999999875421 1001112234566799998      6889999999999999999 888885422  


Q ss_pred             ----------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          141 ----------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       141 ----------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                                ....+...+..+.+++..||+.+|++|||+++|++.|+.+...
T Consensus       472 ~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~  524 (535)
T 2h8h_A          472 EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS  524 (535)
T ss_dssp             HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred             HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence                      1122344567899999999999999999999999999987653

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=2.2e-34  Score=229.27  Aligned_cols=165  Identities=20%  Similarity=0.283  Sum_probs=137.1

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcC-Cc-c-----------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQG-KE-E-----------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~-~~-~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      |.+++||||++++++   ....++||||+++++|.+++. .. .           |++.||.|||+   .+++||||||+
T Consensus       102 l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~  178 (387)
T 1kob_A          102 MNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPE  178 (387)
T ss_dssp             HTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGG
T ss_pred             HHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccchH
Confidence            567899999999999   788999999999999999993 22 1           99999999999   99999999999


Q ss_pred             cEEEcc--CCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC
Q 039565           70 NILLNE--KVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK  141 (188)
Q Consensus        70 nill~~--~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~  141 (188)
                      ||+++.  .+.+||+|||++.....   ........|++.|+|||      ++.++|+||||+++|+|++|..||.....
T Consensus       179 NIll~~~~~~~vkL~DFG~a~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~  255 (387)
T 1kob_A          179 NIMCETKKASSVKIIDFGLATKLNP---DEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD  255 (387)
T ss_dssp             GEEESSTTCCCEEECCCTTCEECCT---TSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH
T ss_pred             HeEEecCCCCceEEEecccceecCC---CcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH
Confidence            999974  46799999999876431   22234457899999999      57889999999999999999999864321


Q ss_pred             ---------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          142 ---------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       142 ---------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                                     .......+..+.+++..||+.||++|||++++++.
T Consensus       256 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h  305 (387)
T 1kob_A          256 LETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH  305 (387)
T ss_dssp             HHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence                           11112346688999999999999999999999873

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=1.7e-34  Score=230.83  Aligned_cols=162  Identities=17%  Similarity=0.225  Sum_probs=128.7

Q ss_pred             cccCCCeeeeccc-------CCccEEEEecCCCCChhhhc-CCc----c---------cHHHHHHHHhcCCCCCcEEeCC
Q 039565            8 KLTGPLLVELIGK-------QKNNALELGFRGNPELVDQQ-GKE----E---------VCCPGLEYLHQGLKHPIIQRDM   66 (188)
Q Consensus         8 ~l~Hpniv~~~~~-------~~~~~lv~e~~~~~~L~~~~-~~~----~---------~i~~~l~~Lh~~~~~~i~h~dl   66 (188)
                      ..+||||++++++       ....++||||+++|+|.+++ .+.    .         |++.||.|||+   .+|+||||
T Consensus       111 ~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrDl  187 (400)
T 1nxk_A          111 ASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDV  187 (400)
T ss_dssp             HTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCC
T ss_pred             hcCCCCcceEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCc
Confidence            4589999999987       34578999999999999999 322    1         99999999999   99999999


Q ss_pred             CCCcEEEcc---CCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCcccc
Q 039565           67 KSTNILLNE---KVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVD  137 (188)
Q Consensus        67 ~~~nill~~---~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~  137 (188)
                      ||+||+++.   ++.+||+|||+++...   .........|++.|++||      ++.++|||||||++|+|++|..||.
T Consensus       188 kp~Nill~~~~~~~~~kl~DFG~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~  264 (400)
T 1nxk_A          188 KPENLLYTSKRPNAILKLTDFGFAKETT---SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY  264 (400)
T ss_dssp             CGGGEEESSSSTTCCEEECCCTTCEECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             CcceEEEecCCCCccEEEEecccccccC---CCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCC
Confidence            999999997   7889999999987543   112234567899999999      5789999999999999999999996


Q ss_pred             ccCCCCc---------------C----HHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          138 LSFKGEF---------------D----IISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       138 ~~~~~~~---------------~----~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      .......               +    ...+..+.+++..||+.||++|||++++++
T Consensus       265 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~  321 (400)
T 1nxk_A          265 SNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  321 (400)
T ss_dssp             CCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CCccccccHHHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            5332110               1    234567899999999999999999999987

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=3.2e-34  Score=228.87  Aligned_cols=174  Identities=17%  Similarity=0.168  Sum_probs=143.2

Q ss_pred             cccccCCCeeeeccc-----CCccEEEEecCCCCChhhhcCCc------c---------cHHHHHHHHhcCCCCCcEEeC
Q 039565            6 RNKLTGPLLVELIGK-----QKNNALELGFRGNPELVDQQGKE------E---------VCCPGLEYLHQGLKHPIIQRD   65 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~------~---------~i~~~l~~Lh~~~~~~i~h~d   65 (188)
                      +.+++||||++++++     ....++||||+++|+|.+++...      .         |++.||.|||+   .+++|||
T Consensus        61 l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~D  137 (396)
T 4eut_A           61 LKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRN  137 (396)
T ss_dssp             HHHCCCTTBCCEEEEEECTTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCC
T ss_pred             HHhcCCCCCCeEEEeeccCCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHH---CCEEECC
Confidence            567899999999998     33679999999999999999331      1         99999999999   9999999


Q ss_pred             CCCCcEEE----ccCCceEEecccCcccccCCCCCcceeeecccccccCCCC--------------CCccchHHHHHHHH
Q 039565           66 MKSTNILL----NEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTEL--------------TEKSDVDSFEIVIL  127 (188)
Q Consensus        66 l~~~nill----~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~--------------~~~~di~s~G~~l~  127 (188)
                      |||+||++    +.++.+||+|||+++...   .........|+..|++||.              +.++|+||||+++|
T Consensus       138 lkp~NIll~~~~~~~~~~kL~DFG~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~  214 (396)
T 4eut_A          138 IKPGNIMRVIGEDGQSVYKLTDFGAARELE---DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFY  214 (396)
T ss_dssp             CCGGGEEEEECTTSCEEEEECCGGGCEECC---CGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHH
T ss_pred             cCHHHEEEeecCCCceeEEEecCCCceEcc---CCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHH
Confidence            99999999    677789999999987543   1222334568899999982              45799999999999


Q ss_pred             HHHhCCccccccCC----------------------------------------CCcCHHHHHHHHHHHHHccCcCCCCC
Q 039565          128 EIITGILTVDLSFK----------------------------------------GEFDIISVEKAVEIAMASVSSKVNRR  167 (188)
Q Consensus       128 ~~~~g~~p~~~~~~----------------------------------------~~~~~~~~~~~~~l~~~cl~~~p~~R  167 (188)
                      +|++|..||.+...                                        ..........+.+++..||+.||++|
T Consensus       215 el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R  294 (396)
T 4eut_A          215 HAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKC  294 (396)
T ss_dssp             HHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTS
T ss_pred             HHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhh
Confidence            99999999853211                                        11335677889999999999999999


Q ss_pred             CCHHHHHHHHhhccCcce
Q 039565          168 PLMNQVVMVREQGSGSRI  185 (188)
Q Consensus       168 ps~~~i~~~l~~~~~~~~  185 (188)
                      |+++++++.++.+....+
T Consensus       295 ~s~~e~l~~l~~il~~~~  312 (396)
T 4eut_A          295 WGFDQFFAETSDILHRMV  312 (396)
T ss_dssp             CCHHHHHHHHHHHHTCEE
T ss_pred             ccHHHHHHHHHHHhhceE
Confidence            999999999988776643

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=3.3e-34  Score=222.62  Aligned_cols=149  Identities=18%  Similarity=0.266  Sum_probs=118.9

Q ss_pred             cEEEEecCCCCChhhhc-CCcc--------------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEccCCceEEecccCcc
Q 039565           24 NALELGFRGNPELVDQQ-GKEE--------------VCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR   88 (188)
Q Consensus        24 ~~lv~e~~~~~~L~~~~-~~~~--------------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~   88 (188)
                      .+++|||+++++|.+++ ....              |++.||.|||+   .+++|||+||+||+++.++.+||+|||+++
T Consensus       136 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~  212 (332)
T 3qd2_B          136 LYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVT  212 (332)
T ss_dssp             EEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             EEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHh---CCeeecCCCcccEEEeCCCCEEEeecCccc
Confidence            79999999999999999 3211              89999999999   999999999999999999999999999988


Q ss_pred             cccCCCCC----------cceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC-------CCCc-
Q 039565           89 ISPVEGGT----------HMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF-------KGEF-  144 (188)
Q Consensus        89 ~~~~~~~~----------~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~-------~~~~-  144 (188)
                      ........          .......|++.|+|||      ++.++|+||||+++|+|++|..|+....       .... 
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~~~~~~~~~~~  292 (332)
T 3qd2_B          213 AMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNLKFP  292 (332)
T ss_dssp             ECSCC--------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHTTCCC
T ss_pred             ccccchhhccccccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHHHHHhhccCCC
Confidence            65422111          1123356899999998      6889999999999999999987653210       1111 


Q ss_pred             --CHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          145 --DIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       145 --~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                        .......+.+++..||+.+|++|||++++++
T Consensus       293 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~  325 (332)
T 3qd2_B          293 LLFTQKYPQEHMMVQDMLSPSPTERPEATDIIE  325 (332)
T ss_dssp             HHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred             cccccCChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence              2344567889999999999999999999986

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=1e-34  Score=221.92  Aligned_cols=177  Identities=19%  Similarity=0.199  Sum_probs=140.2

Q ss_pred             cccccCCCeeeeccc--CCccEEEEecCCCCChhhhcCC-c---c---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQGK-E---E---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~~~-~---~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++  ....++++||+++++|.+++.. .   .         |++.||.|||+   .+++|+|+||+|
T Consensus        75 l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~N  151 (291)
T 1u46_A           75 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARN  151 (291)
T ss_dssp             HHHCCCTTBCCEEEEECSSSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGG
T ss_pred             HHhCCCCCcccEEEEEccCCceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchhe
Confidence            457889999999999  6678999999999999999822 1   1         99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCc-ceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccC--
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTH-MSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSF--  140 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~--  140 (188)
                      |+++.++.++|+|||++.......... ......++..|++||      ++.++|+||||+++|++++ |..||....  
T Consensus       152 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~  231 (291)
T 1u46_A          152 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS  231 (291)
T ss_dssp             EEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH
T ss_pred             EEEcCCCCEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH
Confidence            999999999999999987653222111 122345667899998      5778999999999999999 999885321  


Q ss_pred             -----------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCcce
Q 039565          141 -----------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGSRI  185 (188)
Q Consensus       141 -----------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~~~  185 (188)
                                 ....+...+..+.+++..||+.+|++|||++++++.|+++.++..
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~  287 (291)
T 1u46_A          232 QILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDM  287 (291)
T ss_dssp             HHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred             HHHHHHHccCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccch
Confidence                       112233456789999999999999999999999999998877643

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=1.1e-34  Score=225.71  Aligned_cols=173  Identities=25%  Similarity=0.300  Sum_probs=140.5

Q ss_pred             cccc-cCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc------------------c---------cHHHHHHHH
Q 039565            6 RNKL-TGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE------------------E---------VCCPGLEYL   53 (188)
Q Consensus         6 l~~l-~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~------------------~---------~i~~~l~~L   53 (188)
                      +.++ +||||++++++   .+..+++|||+++++|.+++ ...                  .         |++.||.||
T Consensus        79 l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L  158 (327)
T 1fvr_A           79 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL  158 (327)
T ss_dssp             HTTCCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHH
T ss_pred             HHhccCCCchhhhceeeeeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHH
Confidence            4567 89999999999   78899999999999999999 322                  1         999999999


Q ss_pred             hcCCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHH
Q 039565           54 HQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVIL  127 (188)
Q Consensus        54 h~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~  127 (188)
                      |+   .+++||||||+||+++.++.+||+|||+++...   .........++..|++||      ++.++|+||||+++|
T Consensus       159 H~---~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  232 (327)
T 1fvr_A          159 SQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQE---VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLW  232 (327)
T ss_dssp             HH---TTEECSCCSGGGEEECGGGCEEECCTTCEESSC---EECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHH
T ss_pred             Hh---CCccCCCCccceEEEcCCCeEEEcccCcCcccc---ccccccCCCCCccccChhhhccccCCchhcchHHHHHHH
Confidence            99   999999999999999999999999999986322   111122345667899998      588999999999999


Q ss_pred             HHHh-CCccccccC------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCcc
Q 039565          128 EIIT-GILTVDLSF------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGSR  184 (188)
Q Consensus       128 ~~~~-g~~p~~~~~------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~~  184 (188)
                      +|++ |..||....            ....+...+..+.+++..||+.+|.+|||++++++.|+.+...+
T Consensus       233 ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  302 (327)
T 1fvr_A          233 EIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER  302 (327)
T ss_dssp             HHHTTSCCTTTTCCHHHHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred             HHHcCCCCCCCCCcHHHHHHHhhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence            9998 999885422            12233345678999999999999999999999999998765543

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=1.2e-34  Score=227.60  Aligned_cols=156  Identities=21%  Similarity=0.266  Sum_probs=130.5

Q ss_pred             cCCCeeeeccc---CCccEEEEecCCCCChhhhcCC---cc---------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEc
Q 039565           10 TGPLLVELIGK---QKNNALELGFRGNPELVDQQGK---EE---------VCCPGLEYLHQGLKHPIIQRDMKSTNILLN   74 (188)
Q Consensus        10 ~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~---~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~   74 (188)
                      +||||++++++   ....++||||+++|+|..++.+   ..         |++.||.|||+   .+++||||||+||+++
T Consensus        68 ~hp~iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~  144 (345)
T 3a8x_A           68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLD  144 (345)
T ss_dssp             TCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEEC
T ss_pred             CCCccCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEEC
Confidence            89999999998   7889999999999999999822   22         99999999999   9999999999999999


Q ss_pred             cCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC-------
Q 039565           75 EKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK-------  141 (188)
Q Consensus        75 ~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~-------  141 (188)
                      .++.+||+|||+++....  .........|++.|+|||      ++.++|+|||||++|+|++|..||.....       
T Consensus       145 ~~g~~kL~DFG~a~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~  222 (345)
T 3a8x_A          145 SEGHIKLTDYGMCKEGLR--PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN  222 (345)
T ss_dssp             TTSCEEECCGGGCBCSCC--TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------
T ss_pred             CCCCEEEEeccccccccC--CCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccc
Confidence            999999999999875321  122344568999999999      58899999999999999999999964211       


Q ss_pred             -------------CCcCHHHHHHHHHHHHHccCcCCCCCCCH
Q 039565          142 -------------GEFDIISVEKAVEIAMASVSSKVNRRPLM  170 (188)
Q Consensus       142 -------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  170 (188)
                                   ..++...+..+.+++..||+.+|.+||++
T Consensus       223 ~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~  264 (345)
T 3a8x_A          223 TEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGC  264 (345)
T ss_dssp             CHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred             cHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence                         11223345678899999999999999995

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=5.8e-34  Score=229.02  Aligned_cols=164  Identities=23%  Similarity=0.333  Sum_probs=129.5

Q ss_pred             cccccCCCeeeeccc--CCccEEEEecCCCCChhhhcCC-cc-----------cHHHHHHHHhcCCCCCcEEeCCCCCcE
Q 039565            6 RNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQGK-EE-----------VCCPGLEYLHQGLKHPIIQRDMKSTNI   71 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~~~-~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~ni   71 (188)
                      |.+++||||++++++  .+..++||||+++|+|.+++.. ..           |++.||.|||+   .+++||||||+||
T Consensus       194 l~~l~hpniv~l~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~NI  270 (419)
T 3i6u_A          194 LKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENV  270 (419)
T ss_dssp             HHHCCCTTBCCCCEEEESSEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGE
T ss_pred             HHhCCCCCEeeEEEEEecCceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhE
Confidence            567899999999999  7778999999999999999832 22           99999999999   9999999999999


Q ss_pred             EEccCC---ceEEecccCcccccCCCCCcceeeecccccccCCCC---------CCccchHHHHHHHHHHHhCCcccccc
Q 039565           72 LLNEKV---QAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTEL---------TEKSDVDSFEIVILEIITGILTVDLS  139 (188)
Q Consensus        72 ll~~~~---~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~---------~~~~di~s~G~~l~~~~~g~~p~~~~  139 (188)
                      +++.++   .+||+|||+++...   .........|++.|+|||.         +.++|+||||+++|+|++|..||...
T Consensus       271 ll~~~~~~~~~kl~DFG~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~  347 (419)
T 3i6u_A          271 LLSSQEEDCLIKITDFGHSKILG---ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH  347 (419)
T ss_dssp             EESSSSSSCCEEECCSSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCC
T ss_pred             EEecCCCcceEEEeecccceecC---CCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCC
Confidence            997544   59999999998643   2222345678999999993         34799999999999999999999653


Q ss_pred             CCCC------------cCH----HHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          140 FKGE------------FDI----ISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       140 ~~~~------------~~~----~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ....            ...    ..+..+.+++..||+.+|++|||++++++
T Consensus       348 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  399 (419)
T 3i6u_A          348 RTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR  399 (419)
T ss_dssp             SSSCCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             cchHHHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence            3221            111    23568899999999999999999999987

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=5.4e-34  Score=223.02  Aligned_cols=177  Identities=22%  Similarity=0.183  Sum_probs=139.2

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC----------------------------------------
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK----------------------------------------   42 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~----------------------------------------   42 (188)
                      +.+++||||++++++   .+..++||||+++|+|.+++..                                        
T Consensus        82 l~~l~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (345)
T 3hko_A           82 MKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESL  161 (345)
T ss_dssp             HHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEEC
T ss_pred             HHhCCCCCcceeehhhccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccc
Confidence            567899999999999   7788999999999999998831                                        


Q ss_pred             -c-----------ccHHHHHHHHhcCCCCCcEEeCCCCCcEEEccCC--ceEEecccCcccccCCCC--Ccceeeecccc
Q 039565           43 -E-----------EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKV--QAKLADFGQSRISPVEGG--THMSTTIAGTA  106 (188)
Q Consensus        43 -~-----------~~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~--~~kl~d~~~~~~~~~~~~--~~~~~~~~~~~  106 (188)
                       .           .|++.||.|||+   .+++|+||||+||+++.++  .+||+|||++........  ........|++
T Consensus       162 ~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~  238 (345)
T 3hko_A          162 DFVQREKLISNIMRQIFSALHYLHN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTP  238 (345)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCG
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHH---CCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCc
Confidence             0           089999999999   9999999999999998766  899999999875432211  11234567889


Q ss_pred             cccCCC--------CCCccchHHHHHHHHHHHhCCccccccCC---------------CCcCHHHHHHHHHHHHHccCcC
Q 039565          107 GFLNTE--------LTEKSDVDSFEIVILEIITGILTVDLSFK---------------GEFDIISVEKAVEIAMASVSSK  163 (188)
Q Consensus       107 ~~~~pe--------~~~~~di~s~G~~l~~~~~g~~p~~~~~~---------------~~~~~~~~~~~~~l~~~cl~~~  163 (188)
                      .|+|||        ++.++|+||||+++|+|++|..||.....               .......+..+.+++..||+.+
T Consensus       239 ~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  318 (345)
T 3hko_A          239 YFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRN  318 (345)
T ss_dssp             GGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSC
T ss_pred             cccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCC
Confidence            999998        46799999999999999999999854221               1111124678899999999999


Q ss_pred             CCCCCCHHHHHH--HHhhccCcce
Q 039565          164 VNRRPLMNQVVM--VREQGSGSRI  185 (188)
Q Consensus       164 p~~Rps~~~i~~--~l~~~~~~~~  185 (188)
                      |.+|||+.++++  .+++..+.-.
T Consensus       319 p~~Rps~~~~l~hp~~~~~~~~~~  342 (345)
T 3hko_A          319 VDERFDAMRALQHPWISQFSDKIY  342 (345)
T ss_dssp             TTTSCCHHHHHHSHHHHTTSSCSS
T ss_pred             hhHCCCHHHHhcChhhccChHhhE
Confidence            999999999998  5666655443

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=7.9e-35  Score=229.03  Aligned_cols=165  Identities=20%  Similarity=0.238  Sum_probs=134.8

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CC------cc---------cHHHHHHHHhcCCCCCcEEeCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GK------EE---------VCCPGLEYLHQGLKHPIIQRDM   66 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~------~~---------~i~~~l~~Lh~~~~~~i~h~dl   66 (188)
                      +.+++||||++++++   ....++||||+++++|.+++ ..      ..         |++.||.|||+   .+++||||
T Consensus        80 l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivHrDl  156 (351)
T 3c0i_A           80 CHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD---NNIIHRDV  156 (351)
T ss_dssp             HHHCCCTTBCCEEEEEEETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCC
T ss_pred             HHhCCCCCCCcEEEEEEeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccC
Confidence            467899999999998   78899999999999998877 21      11         99999999999   99999999


Q ss_pred             CCCcEEEccCCc---eEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCcccc
Q 039565           67 KSTNILLNEKVQ---AKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVD  137 (188)
Q Consensus        67 ~~~nill~~~~~---~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~  137 (188)
                      ||+||+++.++.   +||+|||++.....  .........|++.|+|||      ++.++|+||||+++|+|++|..||.
T Consensus       157 kp~NIl~~~~~~~~~vkl~Dfg~a~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~  234 (351)
T 3c0i_A          157 KPHCVLLASKENSAPVKLGGFGVAIQLGE--SGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFY  234 (351)
T ss_dssp             SGGGEEECSSSTTCCEEECCCTTCEECCT--TSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             ChHHeEEecCCCCCcEEEecCcceeEecC--CCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCC
Confidence            999999986554   99999999876432  222234467899999999      6889999999999999999999986


Q ss_pred             ccCC----------CCcCH----HHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          138 LSFK----------GEFDI----ISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       138 ~~~~----------~~~~~----~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ....          ...+.    ..+..+.+++..||+.||++|||+.++++
T Consensus       235 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          235 GTKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             SSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CcHHHHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            4211          01111    23567899999999999999999999986

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=8.6e-35  Score=226.37  Aligned_cols=175  Identities=19%  Similarity=0.247  Sum_probs=140.1

Q ss_pred             cccccCCCeeeeccc-----CCccEEEEecCCCCChhhhcCC--c--c---------cHHHHHHHHhcCCCCCcEEeCCC
Q 039565            6 RNKLTGPLLVELIGK-----QKNNALELGFRGNPELVDQQGK--E--E---------VCCPGLEYLHQGLKHPIIQRDMK   67 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-----~~~~~lv~e~~~~~~L~~~~~~--~--~---------~i~~~l~~Lh~~~~~~i~h~dl~   67 (188)
                      +.+++||||++++++     ....++||||+++++|.+++..  .  .         |++.||.|||+   .+++|+|||
T Consensus        78 l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dik  154 (327)
T 3lxl_A           78 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLA  154 (327)
T ss_dssp             HHTCCCTTBCCEEEEEECSSSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCS
T ss_pred             HHhcCCCceeEEEEEEecCCCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCC
Confidence            567899999999887     4568899999999999999822  1  1         99999999999   999999999


Q ss_pred             CCcEEEccCCceEEecccCcccccCCCCC-cceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           68 STNILLNEKVQAKLADFGQSRISPVEGGT-HMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        68 ~~nill~~~~~~kl~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      |+||+++.++.++|+|||++......... .......++..|++||      ++.++|+||||+++|++++|..||....
T Consensus       155 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~  234 (327)
T 3lxl_A          155 ARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPS  234 (327)
T ss_dssp             GGGEEEEETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHH
T ss_pred             hhhEEECCCCCEEEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCcccc
Confidence            99999999999999999998865322211 1122345777899999      5789999999999999999998874321


Q ss_pred             C---------------------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          141 K---------------------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       141 ~---------------------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                      .                           ...+...+..+.+++..||+.+|.+|||++++++.|+.+...
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~  304 (327)
T 3lxl_A          235 AEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSG  304 (327)
T ss_dssp             HHHHHHCC----CCHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC---
T ss_pred             chhhhhcccccccccHHHHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence            1                           112233456789999999999999999999999999987654

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=2.7e-34  Score=224.76  Aligned_cols=165  Identities=16%  Similarity=0.209  Sum_probs=137.2

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCC-ChhhhcCCc-c-----------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNP-ELVDQQGKE-E-----------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~-~L~~~~~~~-~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||++++++   ....++||||+..| +|..++.+. .           |++.||.|||+   .+++||||||+
T Consensus        83 l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~  159 (335)
T 3dls_A           83 LSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRL---KDIIHRDIKDE  159 (335)
T ss_dssp             HTTCCCTTBCCEEEEEECSSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGG
T ss_pred             HHhCCCCCEeeEEEEEeeCCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeEEeccCHH
Confidence            567899999999999   77889999999776 999999322 2           99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCC-
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFK-  141 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~-  141 (188)
                      ||+++.++.+||+|||++.....   ........|++.|+|||       .+.++|+||||+++|++++|..||..... 
T Consensus       160 NIll~~~~~~kL~Dfg~a~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~  236 (335)
T 3dls_A          160 NIVIAEDFTIKLIDFGSAAYLER---GKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET  236 (335)
T ss_dssp             GEEECTTSCEEECCCTTCEECCT---TCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG
T ss_pred             HEEEcCCCcEEEeecccceECCC---CCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH
Confidence            99999999999999999875431   12234467899999999       26678999999999999999999864221 


Q ss_pred             ----CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          142 ----GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       142 ----~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                          ...+...+..+.+++..||+.+|++|||++++++.
T Consensus       237 ~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          237 VEAAIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD  275 (335)
T ss_dssp             TTTCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred             HhhccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                11223356789999999999999999999999984

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=3e-34  Score=218.35  Aligned_cols=165  Identities=23%  Similarity=0.303  Sum_probs=124.4

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||++++++   ....++++||+++++|.+++ ....            |++.||.|||+   .+++|+|++|+
T Consensus        65 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~  141 (278)
T 3cok_A           65 HCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHS---HGILHRDLTLS  141 (278)
T ss_dssp             HTTBCCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSSCCGG
T ss_pred             HHhCCCCCeEeEEEEEccCCeEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHH
Confidence            467899999999999   77889999999999999998 3211            99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCC-
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKG-  142 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~-  142 (188)
                      ||+++.++.++|+|||.+.......  .......|++.|++||      ++.++|+||||+++|++++|..||+..... 
T Consensus       142 Nili~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~  219 (278)
T 3cok_A          142 NLLLTRNMNIKIADFGLATQLKMPH--EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN  219 (278)
T ss_dssp             GEEECTTCCEEECCCTTCEECC------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-
T ss_pred             HEEEcCCCCEEEEeecceeeccCCC--CcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHH
Confidence            9999999999999999987543111  1223456888999999      477999999999999999999998653221 


Q ss_pred             ----------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          143 ----------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       143 ----------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                ..+...+..+.+++..||+.+|++|||++++++
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          220 TLNKVVLADYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             ----CCSSCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             HHHHHhhcccCCccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence                      123345678899999999999999999999986

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=5.8e-35  Score=231.63  Aligned_cols=161  Identities=21%  Similarity=0.240  Sum_probs=134.7

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC---cc---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK---EE---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~---~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +..++||||+++++.   .+..++||||+++|+|..++.+   ..         |++.||+|||+   .+|+||||||+|
T Consensus        93 l~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~N  169 (373)
T 2r5t_A           93 LKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPEN  169 (373)
T ss_dssp             BCCCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGG
T ss_pred             HHhCCCCCCCCEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHH
Confidence            467899999999988   7889999999999999999822   22         99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC---
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK---  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~---  141 (188)
                      |+++.++.+||+|||+++....  .........|++.|+|||      ++.++|+||||+++|+|++|..||.....   
T Consensus       170 Ill~~~g~ikL~DFG~a~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~  247 (373)
T 2r5t_A          170 ILLDSQGHIVLTDFGLCKENIE--HNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM  247 (373)
T ss_dssp             EEECTTSCEEECCCCBCGGGBC--CCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHH
T ss_pred             EEECCCCCEEEeeCcccccccc--CCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHH
Confidence            9999999999999999875321  122344568999999999      68899999999999999999999854321   


Q ss_pred             --------CCcCHHHHHHHHHHHHHccCcCCCCCCCHH
Q 039565          142 --------GEFDIISVEKAVEIAMASVSSKVNRRPLMN  171 (188)
Q Consensus       142 --------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~  171 (188)
                              ..++...+..+.+++..||+.+|.+||++.
T Consensus       248 ~~~i~~~~~~~~~~~~~~~~~li~~lL~~dp~~R~~~~  285 (373)
T 2r5t_A          248 YDNILNKPLQLKPNITNSARHLLEGLLQKDRTKRLGAK  285 (373)
T ss_dssp             HHHHHHSCCCCCSSSCHHHHHHHHHHTCSSGGGSTTTT
T ss_pred             HHHHHhcccCCCCCCCHHHHHHHHHHcccCHHhCCCCC
Confidence                    122333456789999999999999999974

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=1.1e-34  Score=228.29  Aligned_cols=162  Identities=19%  Similarity=0.231  Sum_probs=137.2

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC---cc---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK---EE---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~---~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++   ....++||||+++|+|.+++.+   ..         |++.||.|||+   .+++||||||+|
T Consensus        95 l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~N  171 (350)
T 1rdq_E           95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPEN  171 (350)
T ss_dssp             HTTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGG
T ss_pred             HHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCccce
Confidence            567899999999998   7788999999999999999922   22         99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC---
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK---  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~---  141 (188)
                      |+++.++.+||+|||+++....     ......|++.|+|||      ++.++|+||||+++|+|++|..||.....   
T Consensus       172 Ill~~~g~~kL~DFg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~  246 (350)
T 1rdq_E          172 LLIDQQGYIQVTDFGFAKRVKG-----RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI  246 (350)
T ss_dssp             EEECTTSCEEECCCTTCEECSS-----CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             EEECCCCCEEEcccccceeccC-----CcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHH
Confidence            9999999999999999875431     123457899999998      58899999999999999999999864321   


Q ss_pred             --------CCcCHHHHHHHHHHHHHccCcCCCCCCC-----HHHHHH
Q 039565          142 --------GEFDIISVEKAVEIAMASVSSKVNRRPL-----MNQVVM  175 (188)
Q Consensus       142 --------~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~i~~  175 (188)
                              ..++...+..+.+++..||+.+|.+||+     +++|++
T Consensus       247 ~~~i~~~~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~  293 (350)
T 1rdq_E          247 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             HHHHHHCCCCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             HHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence                    1233345678899999999999999998     888775

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=3.1e-34  Score=225.56  Aligned_cols=164  Identities=22%  Similarity=0.269  Sum_probs=128.7

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++   ....++||||+++++|.+++....            |++.||.|||+   .+++||||||+|
T Consensus       102 l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~N  178 (349)
T 2w4o_A          102 LLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHE---NGIVHRDLKPEN  178 (349)
T ss_dssp             HHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGG
T ss_pred             HHhCCCCCCcceeeeEecCCeEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCccc
Confidence            567899999999998   778899999999999999993322            99999999999   999999999999


Q ss_pred             EEEcc---CCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC
Q 039565           71 ILLNE---KVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK  141 (188)
Q Consensus        71 ill~~---~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~  141 (188)
                      |+++.   ++.+||+|||+++...   .........|++.|++||      ++.++|+||||+++|+|++|..||.....
T Consensus       179 Ill~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~  255 (349)
T 2w4o_A          179 LLYATPAPDAPLKIADFGLSKIVE---HQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERG  255 (349)
T ss_dssp             EEESSSSTTCCEEECCCC-------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTC
T ss_pred             EEEecCCCCCCEEEccCccccccC---cccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcc
Confidence            99975   7899999999987542   112233467889999998      68899999999999999999999854321


Q ss_pred             C----------------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 G----------------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 ~----------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      .                ......+..+.+++..||+.||++|||++++++
T Consensus       256 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  305 (349)
T 2w4o_A          256 DQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ  305 (349)
T ss_dssp             HHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             cHHHHHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            1                111234567899999999999999999999987

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=2.5e-34  Score=218.29  Aligned_cols=167  Identities=22%  Similarity=0.274  Sum_probs=137.4

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc-c-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE-E-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~-~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++   .+..++++||+++++|.+++... .           |++.||.|||+   .+++|+|++|+|
T Consensus        59 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~N  135 (276)
T 2yex_A           59 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPEN  135 (276)
T ss_dssp             HHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGG
T ss_pred             HHhcCCCCceeeeeEEEcCCEEEEEEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCChHH
Confidence            456899999999999   77889999999999999999432 2           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCCCC
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFKGE  143 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~~  143 (188)
                      |+++.++.++++|||.+................|+..|++||       .+.++|+||||+++|++++|..||+......
T Consensus       136 il~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~  215 (276)
T 2yex_A          136 LLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC  215 (276)
T ss_dssp             EEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTS
T ss_pred             EEEccCCCEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHH
Confidence            999999999999999987543222222233457888999999       2457999999999999999999996543221


Q ss_pred             --------------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          144 --------------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       144 --------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                    .....+..+.+++..||+.+|.+|||++++++
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  261 (276)
T 2yex_A          216 QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKK  261 (276)
T ss_dssp             HHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHhhhcccccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence                          11234567889999999999999999999986

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=1.9e-34  Score=220.71  Aligned_cols=165  Identities=20%  Similarity=0.217  Sum_probs=131.0

Q ss_pred             CcccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            5 NRNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      -+.+++||||++++++   .+..+++|||+++ +|.+++ ....            |++.||.|||+   .+++||||||
T Consensus        53 ~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp  128 (288)
T 1ob3_A           53 ILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKP  128 (288)
T ss_dssp             GGGGCCCTTBCCEEEEEECSSCEEEEEECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCG
T ss_pred             HHHhcCCCCEeeeeeEEccCCeEEEEEEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCH
Confidence            3678899999999999   7789999999985 898888 3211            99999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCC
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFK  141 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~  141 (188)
                      +||+++.++.+||+|||++......  ........+++.|+|||       ++.++|+||||+++|+|++|..||.....
T Consensus       129 ~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~  206 (288)
T 1ob3_A          129 QNLLINREGELKIADFGLARAFGIP--VRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSE  206 (288)
T ss_dssp             GGEEECTTSCEEECCTTHHHHHCC-----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             HHEEEcCCCCEEEeECccccccCcc--ccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence            9999999999999999998754311  11223456788899998       57889999999999999999998853210


Q ss_pred             C----------------------------------------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 G----------------------------------------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 ~----------------------------------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      .                                        ......+..+.+++..||+.||++|||++++++
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          207 ADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (288)
T ss_dssp             HHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            0                                        000123567789999999999999999999986

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=2e-34  Score=224.68  Aligned_cols=165  Identities=24%  Similarity=0.268  Sum_probs=133.7

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC---cc---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK---EE---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~---~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++   .+..++||||+++++|.+++.+   ..         |++.||.|||+   .+++||||||+|
T Consensus        75 l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~N  151 (327)
T 3a62_A           75 LEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQ---KGIIYRDLKPEN  151 (327)
T ss_dssp             HHHCCCTTBCCEEEEEECSSCEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTT
T ss_pred             HHhCCCCCccceeEEEEcCCEEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh---CCEEcccCCHHH
Confidence            567899999999998   7889999999999999999822   12         99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC---
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK---  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~---  141 (188)
                      |+++.++.+||+|||+++.....  ........|++.|+|||      ++.++|+||||+++|+|++|..||.....   
T Consensus       152 ill~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~  229 (327)
T 3a62_A          152 IMLNHQGHVKLTDFGLCKESIHD--GTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKT  229 (327)
T ss_dssp             EEECTTSCEEECCCSCC------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             eEECCCCcEEEEeCCcccccccC--CccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHH
Confidence            99999999999999998743211  11233457889999998      68899999999999999999999964321   


Q ss_pred             --------CCcCHHHHHHHHHHHHHccCcCCCCCC-----CHHHHHH
Q 039565          142 --------GEFDIISVEKAVEIAMASVSSKVNRRP-----LMNQVVM  175 (188)
Q Consensus       142 --------~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~i~~  175 (188)
                              ...+...+..+.+++..||+.+|.+||     +++++++
T Consensus       230 ~~~i~~~~~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~  276 (327)
T 3a62_A          230 IDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA  276 (327)
T ss_dssp             HHHHHHTCCCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence                    123334457889999999999999999     7778776

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=1.5e-34  Score=233.94  Aligned_cols=167  Identities=19%  Similarity=0.247  Sum_probs=137.5

Q ss_pred             CcccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC---cc---------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            5 NRNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK---EE---------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~---~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      -+.+++||||++++++   .+..++||||+++|+|..++.+   ..         |++.||+|||+  ..+|+||||||+
T Consensus       201 ~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~--~~giiHrDlkp~  278 (446)
T 4ejn_A          201 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLE  278 (446)
T ss_dssp             CCCCCSCTTSCCEEEEEEETTEEEEEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHH--HTCCCCCCCCGG
T ss_pred             HHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh--cCCEEECCCCHH
Confidence            4677899999999998   7889999999999999998822   22         99999999995  168999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC--
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK--  141 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~--  141 (188)
                      ||+++.++.+||+|||+++...  ..........|++.|+|||      ++.++|+||||+++|+|++|..||.....  
T Consensus       279 NIll~~~~~~kl~DFG~a~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~  356 (446)
T 4ejn_A          279 NLMLDKDGHIKITDFGLCKEGI--KDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK  356 (446)
T ss_dssp             GEEECSSSCEEECCCCCCCTTC--C-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             HEEECCCCCEEEccCCCceecc--CCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH
Confidence            9999999999999999987532  1122234567999999998      68999999999999999999999954321  


Q ss_pred             ---------CCcCHHHHHHHHHHHHHccCcCCCCCC-----CHHHHHH
Q 039565          142 ---------GEFDIISVEKAVEIAMASVSSKVNRRP-----LMNQVVM  175 (188)
Q Consensus       142 ---------~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~i~~  175 (188)
                               ..++...+..+.+++..||+.||.+||     +++++++
T Consensus       357 ~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~  404 (446)
T 4ejn_A          357 LFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ  404 (446)
T ss_dssp             HHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             HHHHHHhCCCCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence                     123334557889999999999999999     9999986

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=3.1e-34  Score=241.82  Aligned_cols=173  Identities=20%  Similarity=0.201  Sum_probs=140.2

Q ss_pred             cccccCCCeeeeccc--CCccEEEEecCCCCChhhhc--CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQ--GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~--~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++  .+..++||||+++|+|.+++  ....           |++.||.|||+   .+++||||||+|
T Consensus       445 l~~l~HpnIv~l~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDikp~N  521 (656)
T 2j0j_A          445 MRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARN  521 (656)
T ss_dssp             HHHCCCTTBCCEEEEECSSSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGG
T ss_pred             HHhCCCCCCCeEEEEEecCceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchHh
Confidence            567899999999999  77899999999999999999  2211           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccC---
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSF---  140 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~---  140 (188)
                      |+++.++.+||+|||+++.... ..........++..|+|||      ++.++|+||||+++|+|++ |..||....   
T Consensus       522 ILl~~~~~vkL~DFG~a~~~~~-~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~  600 (656)
T 2j0j_A          522 VLVSSNDCVKLGDFGLSRYMED-STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND  600 (656)
T ss_dssp             EEEEETTEEEECCCCCCCSCCC-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH
T ss_pred             EEEeCCCCEEEEecCCCeecCC-CcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHH
Confidence            9999999999999999876431 1111222345667899999      6889999999999999997 888886422   


Q ss_pred             ---------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          141 ---------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       141 ---------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                               ....+...+..+.+++..||+.+|.+|||++++++.|+.+.+
T Consensus       601 ~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~  651 (656)
T 2j0j_A          601 VIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE  651 (656)
T ss_dssp             HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence                     122334456789999999999999999999999999988754

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.3e-34  Score=225.30  Aligned_cols=174  Identities=23%  Similarity=0.295  Sum_probs=139.5

Q ss_pred             cccccCCCeeeeccc-----CCccEEEEecCCCCChhhhc-CC-c--c---------cHHHHHHHHhcCCCCCcEEeCCC
Q 039565            6 RNKLTGPLLVELIGK-----QKNNALELGFRGNPELVDQQ-GK-E--E---------VCCPGLEYLHQGLKHPIIQRDMK   67 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-----~~~~~lv~e~~~~~~L~~~~-~~-~--~---------~i~~~l~~Lh~~~~~~i~h~dl~   67 (188)
                      +.+++||||++++++     ....++|+||+++++|.+++ .. .  .         |++.||.|||+   .+++|+|||
T Consensus        96 l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dik  172 (326)
T 2w1i_A           96 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLA  172 (326)
T ss_dssp             HHTCCCTTBCCEEEEECC----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCC
T ss_pred             HHhCCCCCeeeEEEEEEecCCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCC
Confidence            567899999999987     34789999999999999999 22 1  1         99999999999   999999999


Q ss_pred             CCcEEEccCCceEEecccCcccccCCCCCc-ceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           68 STNILLNEKVQAKLADFGQSRISPVEGGTH-MSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        68 ~~nill~~~~~~kl~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      |+||+++.++.++|+|||++.......... ......++..|+|||      ++.++|+||||+++|++++|..|+....
T Consensus       173 p~NIli~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~  252 (326)
T 2w1i_A          173 TRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP  252 (326)
T ss_dssp             GGGEEEEETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHH
T ss_pred             cceEEEcCCCcEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCH
Confidence            999999999999999999987653222111 112234566799998      5788999999999999999987765320


Q ss_pred             ----------------------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          141 ----------------------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       141 ----------------------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                                                  ....+...+..+.+++..||+.+|++|||+.++++.|+++.+
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~  322 (326)
T 2w1i_A          253 AEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD  322 (326)
T ss_dssp             HHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHhhccccchhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence                                        011223345688999999999999999999999999998764

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=1.8e-34  Score=223.97  Aligned_cols=164  Identities=21%  Similarity=0.233  Sum_probs=133.2

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CC--------cc---------cHHHHHHHHhcCCCCCcEEe
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GK--------EE---------VCCPGLEYLHQGLKHPIIQR   64 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~--------~~---------~i~~~l~~Lh~~~~~~i~h~   64 (188)
                      +.+++||||++++++   .+..++||||++ ++|.+++ ..        ..         |++.||.|||+   .+++||
T Consensus        57 l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~  132 (317)
T 2pmi_A           57 MKELKHENIVRLYDVIHTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE---NKILHR  132 (317)
T ss_dssp             HTTCCBTTBCCEEEEECCTTEEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECC
T ss_pred             HHhcCCCCcceEEEEEEECCeEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCeeeC
Confidence            567899999999999   778899999999 5999887 11        11         99999999999   999999


Q ss_pred             CCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCcccc
Q 039565           65 DMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVD  137 (188)
Q Consensus        65 dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~  137 (188)
                      ||||+||+++.++.+||+|||++.......  .......+++.|+|||       ++.++|+||||+++|+|++|..||.
T Consensus       133 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~  210 (317)
T 2pmi_A          133 DLKPQNLLINKRGQLKLGDFGLARAFGIPV--NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFP  210 (317)
T ss_dssp             CCCGGGEEECTTCCEEECCCSSCEETTSCC--CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             CCChHHeEEcCCCCEEECcCccceecCCCc--ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence            999999999999999999999987643211  1223456788999998       4778999999999999999999885


Q ss_pred             ccCCCC---------------------------------------------cCHHHHHHHHHHHHHccCcCCCCCCCHHH
Q 039565          138 LSFKGE---------------------------------------------FDIISVEKAVEIAMASVSSKVNRRPLMNQ  172 (188)
Q Consensus       138 ~~~~~~---------------------------------------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~  172 (188)
                      .....+                                             .....+..+.+++..||+.||++|||+++
T Consensus       211 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e  290 (317)
T 2pmi_A          211 GTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQ  290 (317)
T ss_dssp             CSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             CCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHH
Confidence            321100                                             00123457889999999999999999999


Q ss_pred             HHH
Q 039565          173 VVM  175 (188)
Q Consensus       173 i~~  175 (188)
                      +++
T Consensus       291 ~l~  293 (317)
T 2pmi_A          291 ALH  293 (317)
T ss_dssp             HTT
T ss_pred             HhC
Confidence            986

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=6.3e-34  Score=222.28  Aligned_cols=172  Identities=19%  Similarity=0.200  Sum_probs=139.3

Q ss_pred             ccCCCeeeeccc---CC----ccEEEEecCCCCChhhhcCC--cc---------cHHHHHHHHh--------cCCCCCcE
Q 039565            9 LTGPLLVELIGK---QK----NNALELGFRGNPELVDQQGK--EE---------VCCPGLEYLH--------QGLKHPII   62 (188)
Q Consensus         9 l~Hpniv~~~~~---~~----~~~lv~e~~~~~~L~~~~~~--~~---------~i~~~l~~Lh--------~~~~~~i~   62 (188)
                      ++||||++++++   ..    ..++||||+++|+|.+++.+  ..         |++.||.|||        +   .+++
T Consensus        93 l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~iv  169 (342)
T 1b6c_B           93 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK---PAIA  169 (342)
T ss_dssp             CCCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCB---CEEE
T ss_pred             cCCCcEEEEEeeecccCCccceeEEEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhccc---CCee
Confidence            799999999998   22    78999999999999999922  22         9999999999        7   8999


Q ss_pred             EeCCCCCcEEEccCCceEEecccCcccccCCCCCc--ceeeecccccccCCCC--C----------CccchHHHHHHHHH
Q 039565           63 QRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTH--MSTTIAGTAGFLNTEL--T----------EKSDVDSFEIVILE  128 (188)
Q Consensus        63 h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~--~~~~~~~~~~~~~pe~--~----------~~~di~s~G~~l~~  128 (188)
                      |+||||+||+++.++.+||+|||++..........  ......|+..|+|||.  .          .++|+||||+++|+
T Consensus       170 H~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~e  249 (342)
T 1b6c_B          170 HRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE  249 (342)
T ss_dssp             CSCCSGGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             eCCCCHHHEEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHH
Confidence            99999999999999999999999987653222111  1234578899999992  1          47999999999999


Q ss_pred             HHhC----------CccccccCC------------------CCcC-----HHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          129 IITG----------ILTVDLSFK------------------GEFD-----IISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       129 ~~~g----------~~p~~~~~~------------------~~~~-----~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      |++|          ..||.....                  ...+     ...+..+.+++..||+.+|++|||++++++
T Consensus       250 l~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~  329 (342)
T 1b6c_B          250 IARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK  329 (342)
T ss_dssp             HHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             HHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            9999          667643211                  1111     256678999999999999999999999999


Q ss_pred             HHhhccCc
Q 039565          176 VREQGSGS  183 (188)
Q Consensus       176 ~l~~~~~~  183 (188)
                      .|+++.++
T Consensus       330 ~L~~i~~~  337 (342)
T 1b6c_B          330 TLSQLSQQ  337 (342)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHH
Confidence            99988765

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=7.3e-35  Score=228.89  Aligned_cols=160  Identities=21%  Similarity=0.321  Sum_probs=134.6

Q ss_pred             cCCCeeeeccc---CCccEEEEecCCCCChhhhcCC---cc---------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEc
Q 039565           10 TGPLLVELIGK---QKNNALELGFRGNPELVDQQGK---EE---------VCCPGLEYLHQGLKHPIIQRDMKSTNILLN   74 (188)
Q Consensus        10 ~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~---~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~   74 (188)
                      +||||++++++   .+..++||||+++|+|.+++.+   ..         |++.||.|||+   .+++||||||+||+++
T Consensus        76 ~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~  152 (345)
T 1xjd_A           76 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLD  152 (345)
T ss_dssp             TCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEEC
T ss_pred             CCCCCCcEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCChhhEEEC
Confidence            89999999998   7889999999999999999822   22         99999999999   9999999999999999


Q ss_pred             cCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC-------
Q 039565           75 EKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK-------  141 (188)
Q Consensus        75 ~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~-------  141 (188)
                      .++.+||+|||+++....  .........|++.|+|||      ++.++|+||||+++|+|++|..||.....       
T Consensus       153 ~~g~vkL~DFG~a~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i  230 (345)
T 1xjd_A          153 KDGHIKIADFGMCKENML--GDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI  230 (345)
T ss_dssp             TTSCEEECCCTTCBCCCC--TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             CCCCEEEeEChhhhhccc--CCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence            999999999999875321  122344568999999999      58899999999999999999999964321       


Q ss_pred             ----CCcCHHHHHHHHHHHHHccCcCCCCCCCHH-HHH
Q 039565          142 ----GEFDIISVEKAVEIAMASVSSKVNRRPLMN-QVV  174 (188)
Q Consensus       142 ----~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~-~i~  174 (188)
                          ..++...+..+.+++..||+.+|++||++. +|+
T Consensus       231 ~~~~~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~  268 (345)
T 1xjd_A          231 RMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIR  268 (345)
T ss_dssp             HHCCCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             HhCCCCCCcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence                123334567889999999999999999987 554

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=2.9e-34  Score=227.62  Aligned_cols=164  Identities=23%  Similarity=0.266  Sum_probs=135.7

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc-c-----------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE-E-----------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~-~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||++++++   .+..++||||+++++|.+++ ... .           |++.||.|||+   .+++||||||+
T Consensus       140 l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~  216 (373)
T 2x4f_A          140 MNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQ---MYILHLDLKPE  216 (373)
T ss_dssp             HTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGG
T ss_pred             HHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHH
Confidence            567899999999999   77889999999999999888 322 1           99999999999   99999999999


Q ss_pred             cEEE--ccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC
Q 039565           70 NILL--NEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK  141 (188)
Q Consensus        70 nill--~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~  141 (188)
                      ||++  +.++.+||+|||+++....   ........|++.|+|||      ++.++|+||||+++|+|++|..||.....
T Consensus       217 NIll~~~~~~~~kl~DFG~a~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~  293 (373)
T 2x4f_A          217 NILCVNRDAKQIKIIDFGLARRYKP---REKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND  293 (373)
T ss_dssp             GEEEEETTTTEEEECCCSSCEECCT---TCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH
T ss_pred             HEEEecCCCCcEEEEeCCCceecCC---ccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH
Confidence            9999  4567899999999886431   12233456899999999      57789999999999999999999854321


Q ss_pred             ---------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 ---------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 ---------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                     .......+..+.+++..||+.+|.+|||++++++
T Consensus       294 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~  342 (373)
T 2x4f_A          294 AETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALK  342 (373)
T ss_dssp             HHHHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                           1111234578899999999999999999999987

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=1.3e-33  Score=216.25  Aligned_cols=173  Identities=16%  Similarity=0.178  Sum_probs=138.7

Q ss_pred             cccccCCCeeeeccc----CCccEEEEecCCCCChhhhcC--Ccc-----------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK----QKNNALELGFRGNPELVDQQG--KEE-----------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~----~~~~~lv~e~~~~~~L~~~~~--~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +.+++|+|++..++.    ....+++|||+ +++|.+++.  ...           |++.||.|||+   .+++||||||
T Consensus        58 l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp  133 (296)
T 4hgt_A           58 YKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKP  133 (296)
T ss_dssp             HHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSG
T ss_pred             HHHhcCCCCCCeeeeecCCCCceEEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCH
Confidence            456778887776665    77789999999 889999983  222           99999999999   9999999999


Q ss_pred             CcEEE---ccCCceEEecccCcccccCCCCC-----cceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCc
Q 039565           69 TNILL---NEKVQAKLADFGQSRISPVEGGT-----HMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGIL  134 (188)
Q Consensus        69 ~nill---~~~~~~kl~d~~~~~~~~~~~~~-----~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~  134 (188)
                      +||++   +.++.+||+|||++.........     .......|+..|++||      ++.++|+||||+++|++++|..
T Consensus       134 ~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~  213 (296)
T 4hgt_A          134 DNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSL  213 (296)
T ss_dssp             GGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred             HHeeeeccCCCCeEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCC
Confidence            99999   78899999999998865422211     1223467889999998      5778999999999999999999


Q ss_pred             cccccCCCCc--------------C-----HHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          135 TVDLSFKGEF--------------D-----IISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       135 p~~~~~~~~~--------------~-----~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                      ||........              +     ...+..+.+++..||+.+|++|||++++++.|+++..
T Consensus       214 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~  280 (296)
T 4hgt_A          214 PWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH  280 (296)
T ss_dssp             TTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHH
T ss_pred             CCcccchhhhhhhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHH
Confidence            9975432211              1     1125678999999999999999999999999987654

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=3.4e-34  Score=218.26  Aligned_cols=163  Identities=25%  Similarity=0.358  Sum_probs=133.9

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC---cc---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK---EE---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~---~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++   ....+++|||+++++|.+++.+   ..         |++.||.|||+   .+++|+|++|+|
T Consensus        63 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~dlkp~N  139 (279)
T 3fdn_A           63 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPEN  139 (279)
T ss_dssp             HTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHT---TTCEECCCCGGG
T ss_pred             HHcCCCCCCcchhheEecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHh
Confidence            467889999999999   7778999999999999998822   22         99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC---
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK---  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~---  141 (188)
                      |+++.++.++|+|||++....    ........|+..|++||      .+.++|+||||+++|++++|..||.....   
T Consensus       140 ili~~~~~~~l~Dfg~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~  215 (279)
T 3fdn_A          140 LLLGSAGELKIADFGWSVHAP----SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET  215 (279)
T ss_dssp             EEECTTSCEEECSCCEESCC------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred             EEEcCCCCEEEEeccccccCC----cccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHH
Confidence            999999999999999875432    11233456888999998      57899999999999999999999864321   


Q ss_pred             --------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 --------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 --------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                              ...+...+..+.+++..||+.+|.+|||++++++
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~  257 (279)
T 3fdn_A          216 YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE  257 (279)
T ss_dssp             HHHHHHTCCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             HHHHHhCCCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence                    1223334567889999999999999999999997

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=1.8e-34  Score=231.24  Aligned_cols=166  Identities=20%  Similarity=0.251  Sum_probs=137.5

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcC--Ccc---------cHHHHHHHHhcCCCCCcEEeCCCCCcE
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQG--KEE---------VCCPGLEYLHQGLKHPIIQRDMKSTNI   71 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~--~~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~ni   71 (188)
                      +..++||||++++++   ....++||||+++|+|.+++.  ...         |++.||.|||+   .+|+||||||+||
T Consensus       123 l~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NI  199 (410)
T 3v8s_A          123 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNM  199 (410)
T ss_dssp             HHHCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGE
T ss_pred             HHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHe
Confidence            456899999999998   778999999999999999982  222         99999999999   9999999999999


Q ss_pred             EEccCCceEEecccCcccccCCCCCcceeeecccccccCCC----------CCCccchHHHHHHHHHHHhCCccccccCC
Q 039565           72 LLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE----------LTEKSDVDSFEIVILEIITGILTVDLSFK  141 (188)
Q Consensus        72 ll~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe----------~~~~~di~s~G~~l~~~~~g~~p~~~~~~  141 (188)
                      +++.++.+||+|||+++... ...........|++.|+|||          ++.++|+||||+++|+|++|..||.....
T Consensus       200 Ll~~~g~ikL~DFG~a~~~~-~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~  278 (410)
T 3v8s_A          200 LLDKSGHLKLADFGTCMKMN-KEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL  278 (410)
T ss_dssp             EECTTSCEEECCCTTCEECC-TTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSH
T ss_pred             eECCCCCEEEeccceeEeec-cCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCCh
Confidence            99999999999999997543 11212234568999999999          35789999999999999999999964321


Q ss_pred             C-------------CcC--HHHHHHHHHHHHHccCcCCCC--CCCHHHHHH
Q 039565          142 G-------------EFD--IISVEKAVEIAMASVSSKVNR--RPLMNQVVM  175 (188)
Q Consensus       142 ~-------------~~~--~~~~~~~~~l~~~cl~~~p~~--Rps~~~i~~  175 (188)
                      .             .++  ...+..+.+++..||+.+|.+  ||++++|++
T Consensus       279 ~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~  329 (410)
T 3v8s_A          279 VGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR  329 (410)
T ss_dssp             HHHHHHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred             hhHHHHHHhccccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence            1             111  134577899999999999988  999999987

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=3.4e-34  Score=219.35  Aligned_cols=163  Identities=22%  Similarity=0.359  Sum_probs=134.3

Q ss_pred             cccccCCCeeeeccc-------CCccEEEEecCCCCChhhhcCC---cc---------cHHHHHHHHhcCCCCC--cEEe
Q 039565            6 RNKLTGPLLVELIGK-------QKNNALELGFRGNPELVDQQGK---EE---------VCCPGLEYLHQGLKHP--IIQR   64 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-------~~~~~lv~e~~~~~~L~~~~~~---~~---------~i~~~l~~Lh~~~~~~--i~h~   64 (188)
                      +.+++||||++++++       ....++||||+++++|.+++..   ..         |++.||.|||+   .+  ++|+
T Consensus        79 l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~~~i~H~  155 (290)
T 1t4h_A           79 LKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHR  155 (290)
T ss_dssp             HTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCS
T ss_pred             HHhCCCCCeeeeeeeeccccCCCceEEEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHc---CCCCEEEC
Confidence            567899999999987       3457999999999999999922   22         99999999999   78  9999


Q ss_pred             CCCCCcEEEc-cCCceEEecccCcccccCCCCCcceeeecccccccCCC-----CCCccchHHHHHHHHHHHhCCccccc
Q 039565           65 DMKSTNILLN-EKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-----LTEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        65 dl~~~nill~-~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-----~~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      ||||+||+++ .++.++|+|||++....    ........|++.|++||     ++.++|+||||+++|+|++|..||..
T Consensus       156 dikp~Nil~~~~~~~~kl~Dfg~~~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~  231 (290)
T 1t4h_A          156 DLKCDNIFITGPTGSVKIGDLGLATLKR----ASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSE  231 (290)
T ss_dssp             CCCGGGEEESSTTSCEEECCTTGGGGCC----TTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             CCCHHHEEEECCCCCEEEeeCCCccccc----ccccccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCC
Confidence            9999999998 78899999999986432    11233456888999998     68899999999999999999999864


Q ss_pred             cCC--------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          139 SFK--------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       139 ~~~--------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ...              ...+...+..+.+++..||+.+|.+|||++++++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  282 (290)
T 1t4h_A          232 CQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             CSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cCcHHHHHHHHhccCCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence            221              1122233467999999999999999999999986

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=1.6e-34  Score=224.89  Aligned_cols=174  Identities=19%  Similarity=0.185  Sum_probs=138.9

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc---------c---------cHHHHHHHHhcCCCCCcEE
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE---------E---------VCCPGLEYLHQGLKHPIIQ   63 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~---------~---------~i~~~l~~Lh~~~~~~i~h   63 (188)
                      +.+++||||++++++   ....+++|||+++++|.+++ ...         .         |++.||.|||+   .+++|
T Consensus        87 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~i~H  163 (327)
T 2yfx_A           87 ISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIH  163 (327)
T ss_dssp             HHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHH---TTCCC
T ss_pred             HhhCCCCCCCeEEEEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeec
Confidence            457899999999999   67889999999999999999 221         1         99999999999   99999


Q ss_pred             eCCCCCcEEEcc---CCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CC
Q 039565           64 RDMKSTNILLNE---KVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GI  133 (188)
Q Consensus        64 ~dl~~~nill~~---~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~  133 (188)
                      +||||+||+++.   +..++|+|||++................++..|++||      ++.++|+||||+++|++++ |.
T Consensus       164 ~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~  243 (327)
T 2yfx_A          164 RDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGY  243 (327)
T ss_dssp             SCCCGGGEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             CcCCHhHEEEecCCCcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCC
Confidence            999999999984   4469999999887543222222233456778899998      6889999999999999998 88


Q ss_pred             ccccccCC------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          134 LTVDLSFK------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       134 ~p~~~~~~------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                      .||.....            ...+...+..+.+++..||+.+|.+|||++++++.|+....
T Consensus       244 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~  304 (327)
T 2yfx_A          244 MPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ  304 (327)
T ss_dssp             CSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCcCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence            88854321            12223445678999999999999999999999999987654

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=5.1e-34  Score=225.28  Aligned_cols=164  Identities=20%  Similarity=0.272  Sum_probs=125.8

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-C--Ccc---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-G--KEE---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~--~~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++   ....++||||+++|+|.+++ .  ...         |++.||.|||+   .+++||||||+|
T Consensus        70 l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~---~~ivH~Dlkp~N  146 (361)
T 3uc3_A           70 HRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHS---MQICHRDLKLEN  146 (361)
T ss_dssp             HHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTCCSCCCCGGG
T ss_pred             HHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHH
Confidence            567899999999999   78899999999999999998 2  222         99999999999   999999999999


Q ss_pred             EEEccCCc--eEEecccCcccccCCCCCcceeeecccccccCCC------CC-CccchHHHHHHHHHHHhCCccccccCC
Q 039565           71 ILLNEKVQ--AKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LT-EKSDVDSFEIVILEIITGILTVDLSFK  141 (188)
Q Consensus        71 ill~~~~~--~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~-~~~di~s~G~~l~~~~~g~~p~~~~~~  141 (188)
                      |+++.++.  +||+|||+++...   .........|++.|+|||      +. .++|+||||+++|+|++|..||.....
T Consensus       147 ill~~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~  223 (361)
T 3uc3_A          147 TLLDGSPAPRLKICDFGYSKSSV---LHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEE  223 (361)
T ss_dssp             EEECSSSSCCEEECCCCCC------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----
T ss_pred             EEEcCCCCceEEEeecCcccccc---ccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCcc
Confidence            99987665  9999999987432   112233457899999999      23 348999999999999999999965322


Q ss_pred             CC---------------c--CHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 GE---------------F--DIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 ~~---------------~--~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ..               .  ....+..+.+++.+||+.+|++|||++++++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~  274 (361)
T 3uc3_A          224 PRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKT  274 (361)
T ss_dssp             CCCHHHHHHHHHTTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             HHHHHHHHHHHhcCCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence            11               1  1123567889999999999999999999987

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=4.4e-34  Score=221.20  Aligned_cols=176  Identities=18%  Similarity=0.190  Sum_probs=135.8

Q ss_pred             CcccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-c---c---------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            5 NRNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-E---E---------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~---~---------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      .+.+++||||++++++   ....++++||+++++|.+++.. .   .         |++.||.|||+   .+++|+||||
T Consensus        82 ~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp  158 (319)
T 2y4i_B           82 AYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKS  158 (319)
T ss_dssp             GGTTCCCTTBCCCCEEEECSSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHH---TTCCCCCCCS
T ss_pred             HHhcCCCCCEeEEEEEEecCCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCCh
Confidence            4667899999999999   7788999999999999999932 2   1         99999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCC---CCcceeeecccccccCCC---------------CCCccchHHHHHHHHHHH
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEG---GTHMSTTIAGTAGFLNTE---------------LTEKSDVDSFEIVILEII  130 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~pe---------------~~~~~di~s~G~~l~~~~  130 (188)
                      +||+++ ++.++|+|||++.......   .........|+..|++||               ++.++|+||||+++|+++
T Consensus       159 ~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~  237 (319)
T 2y4i_B          159 KNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELH  237 (319)
T ss_dssp             TTEEEC---CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHH
T ss_pred             hhEEEe-CCCEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHH
Confidence            999998 6799999999876532111   111222345788899988               256799999999999999


Q ss_pred             hCCccccccCCC-------------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCcc
Q 039565          131 TGILTVDLSFKG-------------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGSR  184 (188)
Q Consensus       131 ~g~~p~~~~~~~-------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~~  184 (188)
                      +|..||......             ......+..+.+++..||..+|++|||++++++.|+.+....
T Consensus       238 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~  304 (319)
T 2y4i_B          238 AREWPFKTQPAEAIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN  304 (319)
T ss_dssp             HSSCSSSSCCHHHHHHHHHTTCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred             hCCCCCCCCCHHHHHHHhccCCCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence            999998643211             011123457889999999999999999999999999887664

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=2.4e-34  Score=226.58  Aligned_cols=161  Identities=19%  Similarity=0.271  Sum_probs=134.6

Q ss_pred             cCCCeeeeccc---CCccEEEEecCCCCChhhhcCC---cc---------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEc
Q 039565           10 TGPLLVELIGK---QKNNALELGFRGNPELVDQQGK---EE---------VCCPGLEYLHQGLKHPIIQRDMKSTNILLN   74 (188)
Q Consensus        10 ~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~---~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~   74 (188)
                      +||||++++++   .+..++||||+++|+|.+++.+   ..         |++.||.|||+   .+|+||||||+||+++
T Consensus        79 ~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~  155 (353)
T 2i0e_A           79 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLD  155 (353)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEEC
T ss_pred             CCCEEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEEc
Confidence            79999999998   7889999999999999999822   22         99999999999   9999999999999999


Q ss_pred             cCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC-------
Q 039565           75 EKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK-------  141 (188)
Q Consensus        75 ~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~-------  141 (188)
                      .++.+||+|||+++....  .........|++.|+|||      ++.++|+||||+++|+|++|..||.....       
T Consensus       156 ~~g~vkL~DFG~a~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i  233 (353)
T 2i0e_A          156 SEGHIKIADFGMCKENIW--DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI  233 (353)
T ss_dssp             TTSCEEECCCTTCBCCCC--TTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             CCCcEEEEeCCccccccc--CCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHH
Confidence            999999999999875321  122344567999999999      68899999999999999999999964321       


Q ss_pred             ----CCcCHHHHHHHHHHHHHccCcCCCCCCC-----HHHHHH
Q 039565          142 ----GEFDIISVEKAVEIAMASVSSKVNRRPL-----MNQVVM  175 (188)
Q Consensus       142 ----~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~i~~  175 (188)
                          ..++...+..+.+++..||+.+|.+||+     +++|++
T Consensus       234 ~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~  276 (353)
T 2i0e_A          234 MEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE  276 (353)
T ss_dssp             HHCCCCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred             HhCCCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence                1233445678899999999999999995     567664

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=6.3e-34  Score=221.03  Aligned_cols=164  Identities=24%  Similarity=0.280  Sum_probs=136.2

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++   ....+++|||+++++|.+++ ....           |++.||.|||+   .+++|+||||+|
T Consensus        69 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~ivH~dikp~N  145 (321)
T 2a2a_A           69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPEN  145 (321)
T ss_dssp             HHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGG
T ss_pred             HHhCCCCCcceEEEEEecCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChHH
Confidence            567899999999999   77889999999999999999 3322           99999999999   999999999999


Q ss_pred             EEEccCC----ceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           71 ILLNEKV----QAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        71 ill~~~~----~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      |+++.++    .++|+|||++......   .......|++.|+|||      ++.++|+||||+++|+|++|..||....
T Consensus       146 Il~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  222 (321)
T 2a2a_A          146 IMLLDKNIPIPHIKLIDFGLAHEIEDG---VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT  222 (321)
T ss_dssp             EEESCTTSSSCCEEECCCTTCEECCTT---CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS
T ss_pred             EEEecCCCCcCCEEEccCccceecCcc---ccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCC
Confidence            9999887    7999999998754321   1223456888999998      5789999999999999999999985432


Q ss_pred             CC-----------CcC----HHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          141 KG-----------EFD----IISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       141 ~~-----------~~~----~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ..           ..+    ...+..+.+++..||+.+|++|||++++++
T Consensus       223 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~  272 (321)
T 2a2a_A          223 KQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR  272 (321)
T ss_dssp             HHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            11           111    123457899999999999999999999987

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=3.6e-34  Score=221.45  Aligned_cols=174  Identities=16%  Similarity=0.144  Sum_probs=135.3

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC---cc---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK---EE---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~---~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++   .+..++++||+++++|.+++..   ..         |++.||.|||+   .+++|+||+|+|
T Consensus        88 l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~N  164 (309)
T 2h34_A           88 AGRLQEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHA---AGATHRDVKPEN  164 (309)
T ss_dssp             HTTCCCTTBCCEEEEEEETTEEEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGG
T ss_pred             HhhcCCCCeeEEEEEEeeCCeEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CcCCcCCCChHH
Confidence            567899999999999   7889999999999999999822   22         99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC---
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK---  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~---  141 (188)
                      |+++.++.++|+|||++..... ..........++..|++||      ++.++|+||||+++|++++|..||.....   
T Consensus       165 Il~~~~~~~kl~Dfg~~~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~  243 (309)
T 2h34_A          165 ILVSADDFAYLVDFGIASATTD-EKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVM  243 (309)
T ss_dssp             EEECTTSCEEECSCCC-----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHH
T ss_pred             EEEcCCCCEEEecCccCccccc-cccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHH
Confidence            9999999999999999875431 1112223456888999999      57899999999999999999999854211   


Q ss_pred             -----------CCcCHHHHHHHHHHHHHccCcCCCCCC-CHHHHHHHHhhccCc
Q 039565          142 -----------GEFDIISVEKAVEIAMASVSSKVNRRP-LMNQVVMVREQGSGS  183 (188)
Q Consensus       142 -----------~~~~~~~~~~~~~l~~~cl~~~p~~Rp-s~~~i~~~l~~~~~~  183 (188)
                                 ...+...+..+.+++..||+.+|++|| +++++++.|+.....
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~  297 (309)
T 2h34_A          244 GAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALAT  297 (309)
T ss_dssp             HHHHHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-
T ss_pred             HHHhccCCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHh
Confidence                       112233456788999999999999999 999999999877554

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=5.2e-34  Score=220.22  Aligned_cols=165  Identities=19%  Similarity=0.219  Sum_probs=130.0

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcC-Ccc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQG-KEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~-~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++   ....++||||+++++|..++. ...           |++.||.|||+   .+++|+|+||+|
T Consensus        56 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~---~~ivH~dlkp~N  132 (311)
T 4agu_A           56 LKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHK---HNCIHRDVKPEN  132 (311)
T ss_dssp             HHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGG
T ss_pred             HHhCCCCCccchhheeecCCeEEEEEEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCChhh
Confidence            567899999999999   778899999999999998872 222           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCCCC
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFKGE  143 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~~  143 (188)
                      |+++.++.++|+|||.+.....  .........++..|++||       ++.++|+||||+++|++++|..||......+
T Consensus       133 il~~~~~~~kl~Dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~  210 (311)
T 4agu_A          133 ILITKHSVIKLCDFGFARLLTG--PSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVD  210 (311)
T ss_dssp             EEECTTSCEEECCCTTCEECC--------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             EEEcCCCCEEEeeCCCchhccC--cccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            9999999999999999875431  112233456788899998       5789999999999999999999885432110


Q ss_pred             c------------------------------------------CHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          144 F------------------------------------------DIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       144 ~------------------------------------------~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      .                                          ....+..+.+++..||+.+|.+|||++++++
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  284 (311)
T 4agu_A          211 QLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH  284 (311)
T ss_dssp             HHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence            0                                          0123445889999999999999999999986

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=1.5e-34  Score=225.24  Aligned_cols=164  Identities=20%  Similarity=0.306  Sum_probs=119.7

Q ss_pred             cccc-CCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            7 NKLT-GPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         7 ~~l~-Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      .++. ||||++++++   ....++||||+++|+|.+++ ....           |++.||.|||+   .+++||||||+|
T Consensus        60 ~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~N  136 (325)
T 3kn6_A           60 KLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPEN  136 (325)
T ss_dssp             HHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGG
T ss_pred             HHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCCeecCCCHHH
Confidence            4455 9999999999   77889999999999999999 3222           99999999999   999999999999


Q ss_pred             EEEccCC---ceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC
Q 039565           71 ILLNEKV---QAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK  141 (188)
Q Consensus        71 ill~~~~---~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~  141 (188)
                      |+++.++   .+||+|||++.....  .........|+..|+|||      ++.++|+||||+++|+|++|..||.....
T Consensus       137 Ill~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~  214 (325)
T 3kn6_A          137 LLFTDENDNLEIKIIDFGFARLKPP--DNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDR  214 (325)
T ss_dssp             EEEEC----CEEEECCCTTCEECCC------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC----
T ss_pred             EEEecCCCcccEEEeccccceecCC--CCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCcc
Confidence            9998765   799999999875431  222234456789999999      57789999999999999999999964321


Q ss_pred             C------------------CcC----HHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 G------------------EFD----IISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 ~------------------~~~----~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      .                  ..+    ...+..+.+++..||+.||.+|||++++++
T Consensus       215 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  270 (325)
T 3kn6_A          215 SLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY  270 (325)
T ss_dssp             ---CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred             ccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence            1                  011    124568899999999999999999999875

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=4.5e-34  Score=218.96  Aligned_cols=164  Identities=16%  Similarity=0.163  Sum_probs=130.8

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-C-Ccc-----------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-G-KEE-----------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~-~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||++++++   ....++||||+++ ++.+.+ . ...           |++.||.|||+   .+++|||+||+
T Consensus        55 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~---~~ivH~dikp~  130 (292)
T 3o0g_A           55 LKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQ  130 (292)
T ss_dssp             HTTCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGG
T ss_pred             HhcCCCCCEeeEEeEEEeCCEEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHH
Confidence            567899999999999   7889999999985 555555 2 222           99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCC-
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFK-  141 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~-  141 (188)
                      ||+++.++.+||+|||++.....  .........++..|+|||       ++.++|+||||+++|+|++|..|+-.... 
T Consensus       131 Nil~~~~~~~kl~Dfg~~~~~~~--~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~  208 (292)
T 3o0g_A          131 NLLINRNGELKLANFGLARAFGI--PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV  208 (292)
T ss_dssp             GEEECTTSCEEECCCTTCEECCS--CCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSH
T ss_pred             HEEEcCCCCEEEeecccceecCC--ccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCH
Confidence            99999999999999999975431  122233456788899998       58899999999999999988876421110 


Q ss_pred             ----------------------------------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 ----------------------------------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 ----------------------------------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                                              .......+..+.+++..||+.||++|||++++++
T Consensus       209 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  282 (292)
T 3o0g_A          209 DDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             HHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence                                                    0011124567789999999999999999999986

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=4.2e-34  Score=227.46  Aligned_cols=167  Identities=25%  Similarity=0.259  Sum_probs=130.6

Q ss_pred             ccccc-CCCeeeeccc-----CCccEEEEecCCCCChhhhc--CCcc---------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLT-GPLLVELIGK-----QKNNALELGFRGNPELVDQQ--GKEE---------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~-Hpniv~~~~~-----~~~~~lv~e~~~~~~L~~~~--~~~~---------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +.++. ||||++++++     ....++||||++ ++|..++  ....         |++.||.|||+   .+|+||||||
T Consensus        62 l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp  137 (388)
T 3oz6_A           62 LTELSGHENIVNLLNVLRADNDRDVYLVFDYME-TDLHAVIRANILEPVHKQYVVYQLIKVIKYLHS---GGLLHRDMKP  137 (388)
T ss_dssp             HHHTTTCTTBCCEEEEEECTTSSCEEEEEECCS-EEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCG
T ss_pred             HHhccCCCCCCeeeeEEecCCCCEEEEEecccC-cCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCH
Confidence            34565 9999999998     336799999998 5899888  2222         99999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCC-------------------CCcceeeecccccccCCC-------CCCccchHHH
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEG-------------------GTHMSTTIAGTAGFLNTE-------LTEKSDVDSF  122 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~pe-------~~~~~di~s~  122 (188)
                      +||+++.++.+||+|||+++......                   .........||+.|+|||       ++.++||||+
T Consensus       138 ~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSl  217 (388)
T 3oz6_A          138 SNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSL  217 (388)
T ss_dssp             GGEEECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHH
T ss_pred             HHeEEcCCCCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHH
Confidence            99999999999999999997542110                   111223457899999998       5788999999


Q ss_pred             HHHHHHHHhCCccccccCCCC-----------------------c-----------------------C-----------
Q 039565          123 EIVILEIITGILTVDLSFKGE-----------------------F-----------------------D-----------  145 (188)
Q Consensus       123 G~~l~~~~~g~~p~~~~~~~~-----------------------~-----------------------~-----------  145 (188)
                      ||++|+|++|..||......+                       +                       +           
T Consensus       218 G~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (388)
T 3oz6_A          218 GCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINP  297 (388)
T ss_dssp             HHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCT
T ss_pred             HHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccc
Confidence            999999999999985422100                       0                       0           


Q ss_pred             -HHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          146 -IISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       146 -~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                       ...+..+.+++..||+.||++|||++++++.
T Consensus       298 ~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~H  329 (388)
T 3oz6_A          298 KADCNEEALDLLDKLLQFNPNKRISANDALKH  329 (388)
T ss_dssp             TCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             cccCCHHHHHHHHHhhccCcccCCCHHHHhCC
Confidence             0124568899999999999999999999874

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=4.3e-34  Score=224.27  Aligned_cols=161  Identities=20%  Similarity=0.267  Sum_probs=132.6

Q ss_pred             cCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEc
Q 039565           10 TGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTNILLN   74 (188)
Q Consensus        10 ~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~   74 (188)
                      +||||++++++   ....++||||+++|+|.+++ ....           |++.||.|||+   .+++||||||+||++.
T Consensus        74 ~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~---~givHrDlkp~NIl~~  150 (342)
T 2qr7_A           74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYV  150 (342)
T ss_dssp             TSTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEES
T ss_pred             CCCCcCeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCcEeccCCHHHEEEe
Confidence            79999999999   77889999999999999998 3322           99999999999   9999999999999985


Q ss_pred             cC----CceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCCC-
Q 039565           75 EK----VQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKGE-  143 (188)
Q Consensus        75 ~~----~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~~-  143 (188)
                      ..    +.+||+|||++.......  .......|++.|+|||      ++.++|+||||+++|+|++|..||....... 
T Consensus       151 ~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~  228 (342)
T 2qr7_A          151 DESGNPESIRICDFGFAKQLRAEN--GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTP  228 (342)
T ss_dssp             SSSCSGGGEEECCCTTCEECBCTT--CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCH
T ss_pred             cCCCCcCeEEEEECCCcccCcCCC--CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCH
Confidence            43    359999999988643221  2234567899999999      5789999999999999999999996432111 


Q ss_pred             -----------------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          144 -----------------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       144 -----------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                       .....+..+.+++..||+.||++|||+.++++
T Consensus       229 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~  277 (342)
T 2qr7_A          229 EEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR  277 (342)
T ss_dssp             HHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence                             11234667899999999999999999999886

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=8.1e-34  Score=217.07  Aligned_cols=164  Identities=24%  Similarity=0.341  Sum_probs=130.6

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CC------cc---------cHHHHHHHHhcCCCCCcEEeCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GK------EE---------VCCPGLEYLHQGLKHPIIQRDM   66 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~------~~---------~i~~~l~~Lh~~~~~~i~h~dl   66 (188)
                      +.+++||||++++++   ....++||||+++++|.+++ ..      ..         |++.||.|||+   .+++|+||
T Consensus        74 l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~di  150 (285)
T 3is5_A           74 LKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS---QHVVHKDL  150 (285)
T ss_dssp             HHTCCCTTBCCEEEEEECSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCC
T ss_pred             HHhCCCchHHhHHHheecCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCC
Confidence            567899999999999   77889999999999999988 11      11         99999999999   99999999


Q ss_pred             CCCcEEEc---cCCceEEecccCcccccCCCCCcceeeecccccccCCC-----CCCccchHHHHHHHHHHHhCCccccc
Q 039565           67 KSTNILLN---EKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-----LTEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        67 ~~~nill~---~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-----~~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      ||+||+++   .++.++|+|||++.....   ........|+..|++||     ++.++|+||||+++|+|++|..||..
T Consensus       151 kp~NIl~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~  227 (285)
T 3is5_A          151 KPENILFQDTSPHSPIKIIDFGLAELFKS---DEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTG  227 (285)
T ss_dssp             SGGGEEESSSSTTCCEEECCCCCCCC-------------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             CHHHEEEecCCCCCCEEEEeeecceecCC---cccCcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCCCCC
Confidence            99999994   457899999999875431   12233456888999998     67899999999999999999999864


Q ss_pred             cCCCC-----------cC---HHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          139 SFKGE-----------FD---IISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       139 ~~~~~-----------~~---~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ....+           ..   ...+..+.+++..||+.+|++|||++++++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          228 TSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             SSHHHHHHHHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             CCHHHHHhhhccCCcccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            32111           10   113567889999999999999999999986

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=4.6e-34  Score=220.52  Aligned_cols=173  Identities=18%  Similarity=0.237  Sum_probs=132.9

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-----c--c---------cHHHHHHHHhcCCCCCcEEeCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-----E--E---------VCCPGLEYLHQGLKHPIIQRDM   66 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-----~--~---------~i~~~l~~Lh~~~~~~i~h~dl   66 (188)
                      +.+++||||++++++   .+..+++|||+++++|.+++..     .  .         |++.||.|||+   .+++|+||
T Consensus        86 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl  162 (310)
T 2wqm_A           86 LKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS---RRVMHRDI  162 (310)
T ss_dssp             HHTCCCTTBCCEEEEEEETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCC
T ss_pred             HHhCCCCCEeeEEEEEEcCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCC
Confidence            567899999999998   7889999999999999998821     1  1         99999999999   99999999


Q ss_pred             CCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           67 KSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        67 ~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      +|+||+++.++.++|+|||++.....  .........++..|++||      ++.++|+||||+++|++++|..||....
T Consensus       163 ~p~NIl~~~~~~~kl~Dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~  240 (310)
T 2wqm_A          163 KPANVFITATGVVKLGDLGLGRFFSS--KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK  240 (310)
T ss_dssp             CGGGEEECTTSCEEECCC--------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---
T ss_pred             cHHHEEEcCCCCEEEEeccceeeecC--CCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc
Confidence            99999999999999999999875431  111223456888899998      5788999999999999999999885422


Q ss_pred             CC---------------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          141 KG---------------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       141 ~~---------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                      ..               ......+..+.+++..||+.||.+|||++++++.|+++...
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~  298 (310)
T 2wqm_A          241 MNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHAC  298 (310)
T ss_dssp             CCHHHHHHHHHTTCSCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHhhcccCCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence            11               11123456799999999999999999999999999887643

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=1.6e-33  Score=229.10  Aligned_cols=163  Identities=18%  Similarity=0.208  Sum_probs=127.7

Q ss_pred             cccccCCCeeeeccc---C------CccEEEEecCCCCChhhhc-CCcc---------cHHHHHHHHhcCCCCCcEEeCC
Q 039565            6 RNKLTGPLLVELIGK---Q------KNNALELGFRGNPELVDQQ-GKEE---------VCCPGLEYLHQGLKHPIIQRDM   66 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~------~~~~lv~e~~~~~~L~~~~-~~~~---------~i~~~l~~Lh~~~~~~i~h~dl   66 (188)
                      +.+++||||++++++   .      ...++||||+++ +|...+ ....         |++.||.|||+   .+|+||||
T Consensus       115 l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~-~l~~~~~~~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDl  190 (464)
T 3ttj_A          115 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDL  190 (464)
T ss_dssp             HHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSE-EHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCC
T ss_pred             HHhCCCCCCCcEEEEEccCCccccCCeEEEEEeCCCC-CHHHHHhhcCCHHHHHHHHHHHHHHHHHHHH---CCcccCCC
Confidence            567899999999998   2      345999999986 566665 3333         99999999999   99999999


Q ss_pred             CCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           67 KSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        67 ~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      ||+||+++.++.+||+|||+++...   .........|++.|+|||      ++.++||||+||++|+|++|+.||....
T Consensus       191 kp~NIll~~~~~~kl~DFG~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~  267 (464)
T 3ttj_A          191 KPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD  267 (464)
T ss_dssp             CGGGEEECTTSCEEECCCCCC--------CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             ChHhEEEeCCCCEEEEEEEeeeecC---CCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            9999999999999999999997543   222334567899999998      6889999999999999999999986432


Q ss_pred             CC------------------------------------C-----------------cCHHHHHHHHHHHHHccCcCCCCC
Q 039565          141 KG------------------------------------E-----------------FDIISVEKAVEIAMASVSSKVNRR  167 (188)
Q Consensus       141 ~~------------------------------------~-----------------~~~~~~~~~~~l~~~cl~~~p~~R  167 (188)
                      ..                                    .                 ........+.+++..||+.||++|
T Consensus       268 ~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R  347 (464)
T 3ttj_A          268 YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKR  347 (464)
T ss_dssp             HHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTS
T ss_pred             HHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhC
Confidence            00                                    0                 001125678999999999999999


Q ss_pred             CCHHHHHH
Q 039565          168 PLMNQVVM  175 (188)
Q Consensus       168 ps~~~i~~  175 (188)
                      ||++++++
T Consensus       348 ~ta~e~L~  355 (464)
T 3ttj_A          348 ISVDDALQ  355 (464)
T ss_dssp             CCHHHHHT
T ss_pred             CCHHHHhc
Confidence            99999987

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=7.1e-34  Score=220.01  Aligned_cols=159  Identities=20%  Similarity=0.221  Sum_probs=128.1

Q ss_pred             cCCCeeeeccc---CCccEEEEecCCCCChhhhc-C-C--cc---------cHHHHHHHHhcCCCCCcEEeCCCCCcEEE
Q 039565           10 TGPLLVELIGK---QKNNALELGFRGNPELVDQQ-G-K--EE---------VCCPGLEYLHQGLKHPIIQRDMKSTNILL   73 (188)
Q Consensus        10 ~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~-~--~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~nill   73 (188)
                      +||||++++++   ....++||||+. ++|.+++ . .  ..         |++.||+|||+   .+++||||||+||++
T Consensus       115 ~h~~iv~l~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll  190 (311)
T 3p1a_A          115 QHPCCVRLEQAWEEGGILYLQTELCG-PSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHS---QGLVHLDVKPANIFL  190 (311)
T ss_dssp             CCTTBCCEEEEEEETTEEEEEEECCC-CBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEE
T ss_pred             CCCcEEEEEEEEEeCCEEEEEEeccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEE
Confidence            89999999999   788999999994 6898887 2 1  22         99999999999   999999999999999


Q ss_pred             ccCCceEEecccCcccccCCCCCcceeeecccccccCCC-----CCCccchHHHHHHHHHHHhCCcccccc------CCC
Q 039565           74 NEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-----LTEKSDVDSFEIVILEIITGILTVDLS------FKG  142 (188)
Q Consensus        74 ~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-----~~~~~di~s~G~~l~~~~~g~~p~~~~------~~~  142 (188)
                      +.++.+||+|||++....   .........|++.|+|||     ++.++||||||+++|++++|..++...      ...
T Consensus       191 ~~~~~~kl~DFG~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~  267 (311)
T 3p1a_A          191 GPRGRCKLGDFGLLVELG---TAGAGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQG  267 (311)
T ss_dssp             CGGGCEEECCCTTCEECC---------CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHTTT
T ss_pred             CCCCCEEEccceeeeecc---cCCCCcccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHhcc
Confidence            999999999999987543   122233456889999999     688999999999999999996544211      111


Q ss_pred             ----CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          143 ----EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       143 ----~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                          +.+...+..+.+++..||+.+|++|||++++++
T Consensus       268 ~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          268 YLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLA  304 (311)
T ss_dssp             CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence                112234578999999999999999999999986

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=5.4e-34  Score=217.14  Aligned_cols=172  Identities=22%  Similarity=0.263  Sum_probs=139.4

Q ss_pred             cccccCCCeeeeccc-------------------CCccEEEEecCCCCChhhhc-CC----cc---------cHHHHHHH
Q 039565            6 RNKLTGPLLVELIGK-------------------QKNNALELGFRGNPELVDQQ-GK----EE---------VCCPGLEY   52 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-------------------~~~~~lv~e~~~~~~L~~~~-~~----~~---------~i~~~l~~   52 (188)
                      +.+++||||++++++                   ....+++|||+++++|.+++ ..    ..         |++.||.|
T Consensus        58 l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~  137 (284)
T 2a19_B           58 LAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDY  137 (284)
T ss_dssp             HHHCCCTTBCCEEEEEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHH
T ss_pred             HHhCCCCCEEEEeeeEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHH
Confidence            567899999999886                   12368999999999999999 22    11         99999999


Q ss_pred             HhcCCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHH
Q 039565           53 LHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVI  126 (188)
Q Consensus        53 Lh~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l  126 (188)
                      ||+   .+++|+||||+||+++.++.++|+|||++......   .......+++.|++||      ++.++|+||||+++
T Consensus       138 lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il  211 (284)
T 2a19_B          138 IHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND---GKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLIL  211 (284)
T ss_dssp             HHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEESSCC---SCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHH
T ss_pred             HHh---CCeeeccCCHHHEEEcCCCCEEECcchhheecccc---ccccccCCcccccChhhhccCCCcchhhhHHHHHHH
Confidence            999   99999999999999999999999999998754321   1223456888999998      68899999999999


Q ss_pred             HHHHhCCcccccc-------CCCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          127 LEIITGILTVDLS-------FKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       127 ~~~~~g~~p~~~~-------~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                      |+|++|..|+...       .....+...+..+.+++..||+.+|.+|||++++++.|+....+
T Consensus       212 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~  275 (284)
T 2a19_B          212 AELLHVCDTAFETSKFFTDLRDGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS  275 (284)
T ss_dssp             HHHHSCCSSHHHHHHHHHHHHTTCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred             HHHHhcCCcchhHHHHHHHhhcccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence            9999998776321       11122233456788999999999999999999999999887654

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=6e-34  Score=223.86  Aligned_cols=160  Identities=25%  Similarity=0.259  Sum_probs=132.7

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc--CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ--GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~--~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||++++++   ....++||||+. |+|.+++  .+..           |++.||.|||+   .+++||||||+
T Consensus       108 l~~l~hpniv~~~~~~~~~~~~~lv~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~  183 (348)
T 1u5q_A          108 LQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAG  183 (348)
T ss_dssp             HHHCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGG
T ss_pred             HHhCCCCCEeeEEEEEEECCeEEEEEecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHH
Confidence            567899999999998   788999999998 6887777  2211           99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC---------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE---------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe---------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      ||+++.++.+||+|||++.....      .....|++.|+|||         ++.++|+||||+++|+|++|..||....
T Consensus       184 NIll~~~~~~kL~DfG~a~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~  257 (348)
T 1u5q_A          184 NILLSEPGLVKLGDFGSASIMAP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN  257 (348)
T ss_dssp             GEEEETTTEEEECCCTTCBSSSS------BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred             HEEECCCCCEEEeeccCceecCC------CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            99999999999999999875431      23456888999998         4678999999999999999999885321


Q ss_pred             -------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          141 -------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       141 -------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                   ........+..+.+++..||+.+|++|||++++++
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~  305 (348)
T 1u5q_A          258 AMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK  305 (348)
T ss_dssp             HHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             hHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence                         11112334567889999999999999999999986

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=1.2e-33  Score=231.35  Aligned_cols=164  Identities=25%  Similarity=0.302  Sum_probs=135.7

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CC--cc---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GK--EE---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~--~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++   ....++||||+++|+|.+++ ..  ..         |++.||.|||+   .+++||||||+|
T Consensus        90 l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~N  166 (494)
T 3lij_A           90 LKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPEN  166 (494)
T ss_dssp             HTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGG
T ss_pred             HHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChhh
Confidence            567899999999999   77889999999999999888 22  22         99999999999   999999999999


Q ss_pred             EEEccC---CceEEecccCcccccCCCCCcceeeecccccccCCC-----CCCccchHHHHHHHHHHHhCCccccccCCC
Q 039565           71 ILLNEK---VQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-----LTEKSDVDSFEIVILEIITGILTVDLSFKG  142 (188)
Q Consensus        71 ill~~~---~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-----~~~~~di~s~G~~l~~~~~g~~p~~~~~~~  142 (188)
                      |+++..   +.+||+|||++.....   ........|++.|+|||     ++.++||||+|+++|+|++|..||......
T Consensus       167 il~~~~~~~~~~kl~DfG~a~~~~~---~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~  243 (494)
T 3lij_A          167 LLLESKEKDALIKIVDFGLSAVFEN---QKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ  243 (494)
T ss_dssp             EEESCSSTTCCEEECCCTTCEECBT---TBCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             EEEeCCCCCCcEEEEECCCCeECCC---CccccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            999764   4599999999876431   12234467899999998     688999999999999999999998643211


Q ss_pred             ---------------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          143 ---------------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       143 ---------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                     ......+..+.+++..||+.+|.+|||++++++
T Consensus       244 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  291 (494)
T 3lij_A          244 EILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE  291 (494)
T ss_dssp             HHHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence                           111234567899999999999999999999886

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=9.5e-34  Score=234.73  Aligned_cols=164  Identities=23%  Similarity=0.276  Sum_probs=138.5

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc----c---------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE----E---------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~----~---------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      |.+++||||+++++.   ....++||||+++|+|..++ ...    .         |++.||.|||+   .+|+||||||
T Consensus       238 L~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~---~gIvHrDLKP  314 (576)
T 2acx_A          238 LEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHR---ERIVYRDLKP  314 (576)
T ss_dssp             HHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCG
T ss_pred             HHHcCCCCEeeEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCch
Confidence            567899999999988   78899999999999999998 221    1         99999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCC
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKG  142 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~  142 (188)
                      +||+++.++.+||+|||+++....   ........|++.|+|||      ++.++|+|||||++|+|++|..||......
T Consensus       315 eNILld~~g~vKL~DFGla~~~~~---~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~  391 (576)
T 2acx_A          315 ENILLDDHGHIRISDLGLAVHVPE---GQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK  391 (576)
T ss_dssp             GGEEECTTSCEEECCCTTCEECCT---TCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSC
T ss_pred             heEEEeCCCCeEEEecccceeccc---CccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccc
Confidence            999999999999999999976431   12234468999999999      688999999999999999999999764321


Q ss_pred             ---------------CcCHHHHHHHHHHHHHccCcCCCCCC-----CHHHHHH
Q 039565          143 ---------------EFDIISVEKAVEIAMASVSSKVNRRP-----LMNQVVM  175 (188)
Q Consensus       143 ---------------~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~i~~  175 (188)
                                     .++...+..+.+++..||+.||.+||     +++++++
T Consensus       392 ~~~~~i~~~i~~~~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~  444 (576)
T 2acx_A          392 IKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE  444 (576)
T ss_dssp             CCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred             hhHHHHHHHhhcccccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence                           23334456889999999999999999     7888875

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=4.6e-33  Score=213.27  Aligned_cols=173  Identities=16%  Similarity=0.179  Sum_probs=137.8

Q ss_pred             cccccCCCeeeeccc----CCccEEEEecCCCCChhhhcC--Ccc-----------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK----QKNNALELGFRGNPELVDQQG--KEE-----------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~----~~~~~lv~e~~~~~~L~~~~~--~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +.+++|++++..+..    ....+++|||+ +++|.+++.  ...           |++.||.|||+   .+++|+||||
T Consensus        58 l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp  133 (296)
T 3uzp_A           58 YKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKP  133 (296)
T ss_dssp             HHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCG
T ss_pred             HHHhhcCCCCCccccccCCCCceEEEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCH
Confidence            456788887666555    77789999999 789999983  222           99999999999   9999999999


Q ss_pred             CcEEEc---cCCceEEecccCcccccCCCCC-----cceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCc
Q 039565           69 TNILLN---EKVQAKLADFGQSRISPVEGGT-----HMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGIL  134 (188)
Q Consensus        69 ~nill~---~~~~~kl~d~~~~~~~~~~~~~-----~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~  134 (188)
                      +||+++   .++.+||+|||++.........     .......|+..|+|||      ++.++|+||||+++|++++|..
T Consensus       134 ~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~  213 (296)
T 3uzp_A          134 DNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSL  213 (296)
T ss_dssp             GGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred             HHeEEecCCCCCeEEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCC
Confidence            999994   7889999999998765422211     1123467889999998      5788999999999999999999


Q ss_pred             cccccCCCC--------------cC-----HHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          135 TVDLSFKGE--------------FD-----IISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       135 p~~~~~~~~--------------~~-----~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                      ||.......              .+     ...+..+.+++..||+.+|.+|||++++++.|+++..
T Consensus       214 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~  280 (296)
T 3uzp_A          214 PWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH  280 (296)
T ss_dssp             TTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHH
T ss_pred             CCCCcCchhhhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHH
Confidence            997532211              01     1234678999999999999999999999999987653

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=2e-33  Score=228.03  Aligned_cols=166  Identities=20%  Similarity=0.185  Sum_probs=126.6

Q ss_pred             cccccCCCeeeeccc--------CCccEEEEecCCCCChhhhc-CCc--c---------cHHHHHHHHhcCCCCCcEEeC
Q 039565            6 RNKLTGPLLVELIGK--------QKNNALELGFRGNPELVDQQ-GKE--E---------VCCPGLEYLHQGLKHPIIQRD   65 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--------~~~~~lv~e~~~~~~L~~~~-~~~--~---------~i~~~l~~Lh~~~~~~i~h~d   65 (188)
                      |.+++||||++++++        ....++||||+. ++|..++ ...  .         |++.||.|||+   .+|+|||
T Consensus       106 l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~iiHrD  181 (458)
T 3rp9_A          106 LNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIAD-SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHS---AGILHRD  181 (458)
T ss_dssp             HHHCCCTTBCCEEEECCCSCTTTCCCEEEEECCCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCC
T ss_pred             HHhCCCCCCCceEEEEecCCcccCceEEEEEeccc-cchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHh---CCcCCCC
Confidence            567899999999988        256899999986 6899988 322  1         99999999999   9999999


Q ss_pred             CCCCcEEEccCCceEEecccCcccccCCCCC-------------------------cceeeecccccccCCC-------C
Q 039565           66 MKSTNILLNEKVQAKLADFGQSRISPVEGGT-------------------------HMSTTIAGTAGFLNTE-------L  113 (188)
Q Consensus        66 l~~~nill~~~~~~kl~d~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~pe-------~  113 (188)
                      |||+|||++.++.+||+|||+++........                         .......||+.|+|||       +
T Consensus       182 lKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~  261 (458)
T 3rp9_A          182 LKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENY  261 (458)
T ss_dssp             CCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCC
T ss_pred             CChhhEEECCCCCEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCC
Confidence            9999999999999999999999864321110                         1223457899999999       5


Q ss_pred             CCccchHHHHHHHHHHHh-----------CCccccccCCC----------C-----------------------------
Q 039565          114 TEKSDVDSFEIVILEIIT-----------GILTVDLSFKG----------E-----------------------------  143 (188)
Q Consensus       114 ~~~~di~s~G~~l~~~~~-----------g~~p~~~~~~~----------~-----------------------------  143 (188)
                      +.++|||||||++|+|++           |..+|.....-          .                             
T Consensus       262 ~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~  341 (458)
T 3rp9_A          262 TEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEA  341 (458)
T ss_dssp             CTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHT
T ss_pred             CcHhHHHHHHHHHHHHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhh
Confidence            788999999999999998           44444221100          0                             


Q ss_pred             -----------------------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          144 -----------------------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       144 -----------------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                             .....+..+.+++..||+.||++|||++++++
T Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~  396 (458)
T 3rp9_A          342 LEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLA  396 (458)
T ss_dssp             SSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             cCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence                                   00112557889999999999999999999998

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=7.6e-34  Score=219.82  Aligned_cols=175  Identities=21%  Similarity=0.241  Sum_probs=140.0

Q ss_pred             cccccCCCeeeeccc-------CCccEEEEecCCCCChhhhcCC----cc------------cHHHHHHHHhcCCCCCcE
Q 039565            6 RNKLTGPLLVELIGK-------QKNNALELGFRGNPELVDQQGK----EE------------VCCPGLEYLHQGLKHPII   62 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-------~~~~~lv~e~~~~~~L~~~~~~----~~------------~i~~~l~~Lh~~~~~~i~   62 (188)
                      +.+++||||++++++       ....++++||+++++|.+++..    ..            |++.||.|||+   .+++
T Consensus        80 l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~iv  156 (317)
T 2buj_A           80 HRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA---KGYA  156 (317)
T ss_dssp             HHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEE
T ss_pred             HhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCcc
Confidence            467899999999998       2477899999999999998822    11            99999999999   9999


Q ss_pred             EeCCCCCcEEEccCCceEEecccCcccccCCCCCc-------ceeeecccccccCCC---------CCCccchHHHHHHH
Q 039565           63 QRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTH-------MSTTIAGTAGFLNTE---------LTEKSDVDSFEIVI  126 (188)
Q Consensus        63 h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~-------~~~~~~~~~~~~~pe---------~~~~~di~s~G~~l  126 (188)
                      |+||||+||+++.++.++|+|||.+..........       ......|+..|++||         ++.++|+||||+++
T Consensus       157 H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il  236 (317)
T 2buj_A          157 HRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVL  236 (317)
T ss_dssp             CCCCCGGGEEECTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHH
T ss_pred             cCCCCHHHEEEcCCCCEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHH
Confidence            99999999999999999999999876432110000       011245688899999         36789999999999


Q ss_pred             HHHHhCCccccccC--------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          127 LEIITGILTVDLSF--------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       127 ~~~~~g~~p~~~~~--------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                      |++++|..||+...              ........+..+.+++..||+.+|.+|||++++++.|+.+.+.
T Consensus       237 ~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  307 (317)
T 2buj_A          237 YAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP  307 (317)
T ss_dssp             HHHHHSSCTTHHHHHTTSCHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCC
T ss_pred             HHHHhCCCChhhhhcccchhhHHhhccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCC
Confidence            99999999985311              1111223456899999999999999999999999999988765

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=9.8e-34  Score=223.09  Aligned_cols=167  Identities=22%  Similarity=0.255  Sum_probs=135.9

Q ss_pred             cccc-cCCCeeeeccc---CCccEEEEecCCCCChhhhcC---Ccc---------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKL-TGPLLVELIGK---QKNNALELGFRGNPELVDQQG---KEE---------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l-~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~---~~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.++ +||||++++++   ....++||||+++++|.+++.   ...         |++.||.|||+   .+++||||||+
T Consensus       112 l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~  188 (355)
T 1vzo_A          112 LEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLE  188 (355)
T ss_dssp             HHHHHTCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGG
T ss_pred             HHHccCCCceeEEEEEEeeCceEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHH
Confidence            3445 69999999988   778899999999999999982   222         99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC--------CCCccchHHHHHHHHHHHhCCccccccCC
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE--------LTEKSDVDSFEIVILEIITGILTVDLSFK  141 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe--------~~~~~di~s~G~~l~~~~~g~~p~~~~~~  141 (188)
                      ||+++.++.+||+|||+++.... ..........|++.|++||        ++.++|+||||+++|+|++|..||.....
T Consensus       189 NIll~~~~~~kl~DfG~a~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~  267 (355)
T 1vzo_A          189 NILLDSNGHVVLTDFGLSKEFVA-DETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGE  267 (355)
T ss_dssp             GEEECTTSCEEESCSSEEEECCG-GGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTS
T ss_pred             HEEECCCCcEEEeeCCCCeeccc-CCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCc
Confidence            99999999999999999875421 1122233467899999998        35789999999999999999999964322


Q ss_pred             C---------------CcCHHHHHHHHHHHHHccCcCCCCCC-----CHHHHHHH
Q 039565          142 G---------------EFDIISVEKAVEIAMASVSSKVNRRP-----LMNQVVMV  176 (188)
Q Consensus       142 ~---------------~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~i~~~  176 (188)
                      .               ..+...+..+.+++..||+.||.+||     +++++++.
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h  322 (355)
T 1vzo_A          268 KNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH  322 (355)
T ss_dssp             CCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred             cchHHHHHHHHhccCCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence            1               22333456788999999999999999     99999874

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=5.4e-34  Score=230.15  Aligned_cols=166  Identities=21%  Similarity=0.247  Sum_probs=136.8

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-cc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-EE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +..++||||++++++   ....++||||+++|+|.+++.+ ..            |++.||.|||+   .+|+||||||+
T Consensus       128 l~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~  204 (437)
T 4aw2_A          128 LVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQ---LHYVHRDIKPD  204 (437)
T ss_dssp             HHHSCTTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGG
T ss_pred             HHhCCCCCEEEEEEEEeeCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHH
Confidence            456799999999998   7889999999999999999932 22            99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-----------CCCccchHHHHHHHHHHHhCCccccc
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-----------LTEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-----------~~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      ||+++.++.+||+|||+++... ...........||+.|+|||           ++.++|+|||||++|+|++|..||..
T Consensus       205 NILl~~~g~vkL~DFGla~~~~-~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~  283 (437)
T 4aw2_A          205 NILMDMNGHIRLADFGSCLKLM-EDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYA  283 (437)
T ss_dssp             GEEECTTSCEEECCCTTCEECC-TTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             HeeEcCCCCEEEcchhhhhhcc-cCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCC
Confidence            9999999999999999997543 22222333467999999998           36789999999999999999999964


Q ss_pred             cCCC-------------CcC---HHHHHHHHHHHHHccCcCCCC--CCCHHHHHH
Q 039565          139 SFKG-------------EFD---IISVEKAVEIAMASVSSKVNR--RPLMNQVVM  175 (188)
Q Consensus       139 ~~~~-------------~~~---~~~~~~~~~l~~~cl~~~p~~--Rps~~~i~~  175 (188)
                      ....             .++   ...+..+.+++..|+..+|++  ||+++++++
T Consensus       284 ~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~  338 (437)
T 4aw2_A          284 ESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK  338 (437)
T ss_dssp             SSHHHHHHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred             CChhHHHHhhhhccccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence            3211             111   124678899999999888888  999999987

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=2.6e-33  Score=213.05  Aligned_cols=164  Identities=18%  Similarity=0.205  Sum_probs=136.2

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-C--Ccc---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-G--KEE---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~--~~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++   ....++||||+++++|.+++ .  ...         |++.||.|||+   .+++|+|+||+|
T Consensus        60 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~N  136 (277)
T 3f3z_A           60 MKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPEN  136 (277)
T ss_dssp             HHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGG
T ss_pred             HHhCCCCCEeeEEEEEecCCeEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHH
Confidence            567899999999999   77889999999999999988 2  122         99999999999   999999999999


Q ss_pred             EEE---ccCCceEEecccCcccccCCCCCcceeeecccccccCCC-----CCCccchHHHHHHHHHHHhCCccccccCCC
Q 039565           71 ILL---NEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-----LTEKSDVDSFEIVILEIITGILTVDLSFKG  142 (188)
Q Consensus        71 ill---~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-----~~~~~di~s~G~~l~~~~~g~~p~~~~~~~  142 (188)
                      |++   +.++.++++|||.+.....   ........|++.|++||     ++.++|+||||+++|++++|..||......
T Consensus       137 il~~~~~~~~~~~l~Dfg~~~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~  213 (277)
T 3f3z_A          137 FLFLTDSPDSPLKLIDFGLAARFKP---GKMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDS  213 (277)
T ss_dssp             EEESSSSTTCCEEECCCTTCEECCT---TSCBCCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             EEEecCCCCCcEEEEecccceeccC---ccchhccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCHH
Confidence            999   7788999999999875431   12233456888999998     688999999999999999999998653211


Q ss_pred             -----------CcCH----HHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          143 -----------EFDI----ISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       143 -----------~~~~----~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                 ..+.    ..+..+.+++..||+.+|++|||+.++++
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~  261 (277)
T 3f3z_A          214 EVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE  261 (277)
T ss_dssp             HHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                       1122    23568899999999999999999999986

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=8.9e-34  Score=220.64  Aligned_cols=170  Identities=19%  Similarity=0.203  Sum_probs=131.4

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc---c---------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE---E---------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~---~---------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||++++++   ....++||||++ ++|.+++ ...   .         |++.||.|||+   .+++||||||+
T Consensus        54 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dikp~  129 (324)
T 3mtl_A           54 LKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHR---QKVLHRDLKPQ  129 (324)
T ss_dssp             HSCCCCTTBCCEEEEEECSSCEEEEEECCS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCCGG
T ss_pred             HHhcCCCCCCeeeeEEeeCCEEEEEecccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCcCHH
Confidence            567899999999999   788899999998 5888888 221   1         99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCCC
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFKG  142 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~  142 (188)
                      ||+++.++.+||+|||++.....  .........++..|+|||       ++.++|+||||+++|+|++|..||......
T Consensus       130 NIl~~~~~~~kl~Dfg~a~~~~~--~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~  207 (324)
T 3mtl_A          130 NLLINERGELKLADFGLARAKSI--PTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVE  207 (324)
T ss_dssp             GEEECTTCCEEECSSSEEECC--------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             HEEECCCCCEEEccCcccccccC--CccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            99999999999999999875321  112233456788899998       477899999999999999999998543210


Q ss_pred             C----------------c-------------------------CHHHHHHHHHHHHHccCcCCCCCCCHHHHHH--HHhh
Q 039565          143 E----------------F-------------------------DIISVEKAVEIAMASVSSKVNRRPLMNQVVM--VREQ  179 (188)
Q Consensus       143 ~----------------~-------------------------~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~--~l~~  179 (188)
                      +                +                         ....+..+.+++..||+.||.+|||++++++  .+.+
T Consensus       208 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~  287 (324)
T 3mtl_A          208 EQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLS  287 (324)
T ss_dssp             HHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGG
T ss_pred             HHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhh
Confidence            0                0                         0112456789999999999999999999987  4444


Q ss_pred             cc
Q 039565          180 GS  181 (188)
Q Consensus       180 ~~  181 (188)
                      ..
T Consensus       288 ~~  289 (324)
T 3mtl_A          288 LG  289 (324)
T ss_dssp             GC
T ss_pred             cc
Confidence            43

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=1.9e-33  Score=221.92  Aligned_cols=173  Identities=17%  Similarity=0.139  Sum_probs=139.2

Q ss_pred             ccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC-----cc------------cHHHHHHHHhcCCCCCcEEeCC
Q 039565            7 NKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK-----EE------------VCCPGLEYLHQGLKHPIIQRDM   66 (188)
Q Consensus         7 ~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~-----~~------------~i~~~l~~Lh~~~~~~i~h~dl   66 (188)
                      ....|+||+++++.   .+..++||||+++|+|.+++..     ..            |++.||+|||+   .+|+||||
T Consensus       122 ~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~---~~ivHrDi  198 (365)
T 3e7e_A          122 KPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD---CEIIHGDI  198 (365)
T ss_dssp             CGGGGGGBCCEEEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCC
T ss_pred             hhhhhhhhhhhheeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeecCCC
Confidence            34559999999998   7889999999999999999921     11            99999999999   99999999


Q ss_pred             CCCcEEEcc-----------CCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHH
Q 039565           67 KSTNILLNE-----------KVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEI  129 (188)
Q Consensus        67 ~~~nill~~-----------~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~  129 (188)
                      ||+||+++.           ++.+||+|||+++...............||..|+|||      ++.++|+||||+++|+|
T Consensus       199 Kp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  278 (365)
T 3e7e_A          199 KPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCM  278 (365)
T ss_dssp             SGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHH
T ss_pred             CHHHEEecccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHH
Confidence            999999998           8999999999997543233333445567999999999      68899999999999999


Q ss_pred             HhCCccccccCCCC------c-CHHHHHHHHHHHHHccCcCCCCC-CCHHHHHHHHhhccC
Q 039565          130 ITGILTVDLSFKGE------F-DIISVEKAVEIAMASVSSKVNRR-PLMNQVVMVREQGSG  182 (188)
Q Consensus       130 ~~g~~p~~~~~~~~------~-~~~~~~~~~~l~~~cl~~~p~~R-ps~~~i~~~l~~~~~  182 (188)
                      ++|..||.......      + .......+.+++..|++.+|.+| |+++++.+.|+...+
T Consensus       279 ltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~  339 (365)
T 3e7e_A          279 LFGTYMKVKNEGGECKPEGLFRRLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQ  339 (365)
T ss_dssp             HHSSCCCEEEETTEEEECSCCTTCSSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHH
T ss_pred             HhCCCccccCCCCceeechhccccCcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHH
Confidence            99998885432211      0 11235677889999999999998 568888877766543

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=1.3e-33  Score=216.21  Aligned_cols=165  Identities=22%  Similarity=0.276  Sum_probs=135.7

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc---c-----------cHHHHHHHHhcCCCCCcEEeCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE---E-----------VCCPGLEYLHQGLKHPIIQRDMK   67 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~---~-----------~i~~~l~~Lh~~~~~~i~h~dl~   67 (188)
                      +.+++||||++++++   ....++++||+++++|.+++ ...   .           |++.||.|||+   .+++|+||+
T Consensus        73 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~  149 (295)
T 2clq_A           73 HKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD---NQIVHRDIK  149 (295)
T ss_dssp             HHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHH---TTEECCCCS
T ss_pred             HHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHh---CCEEccCCC
Confidence            467899999999998   77889999999999999998 221   1           89999999999   999999999


Q ss_pred             CCcEEEcc-CCceEEecccCcccccCCCCCcceeeecccccccCCC--------CCCccchHHHHHHHHHHHhCCccccc
Q 039565           68 STNILLNE-KVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE--------LTEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        68 ~~nill~~-~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe--------~~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      |+||+++. ++.++|+|||.+.....  .........|+..|++||        ++.++|+||||+++|+|++|..||..
T Consensus       150 p~Nil~~~~~~~~kl~Dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  227 (295)
T 2clq_A          150 GDNVLINTYSGVLKISDFGTSKRLAG--INPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYE  227 (295)
T ss_dssp             GGGEEEETTTCCEEECCTTTCEESCC-------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGG
T ss_pred             hhhEEEECCCCCEEEeecccccccCC--CCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccC
Confidence            99999987 88999999999875431  112233456888999998        46789999999999999999999853


Q ss_pred             cC--------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          139 SF--------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       139 ~~--------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ..              ....+...+..+.+++..||+.+|++|||++++++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          228 LGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLV  278 (295)
T ss_dssp             GSSHHHHHHHHHHHCCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred             CCchhHHHHhhccccccccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            21              12233445678899999999999999999999986

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=2.6e-34  Score=222.33  Aligned_cols=172  Identities=22%  Similarity=0.296  Sum_probs=128.5

Q ss_pred             CcccccCCCeeeeccc---CC----ccEEEEecCCCCChhhhcCC---cc---------cHHHHHHHHhcCCCCCcEEeC
Q 039565            5 NRNKLTGPLLVELIGK---QK----NNALELGFRGNPELVDQQGK---EE---------VCCPGLEYLHQGLKHPIIQRD   65 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~---~~----~~~lv~e~~~~~~L~~~~~~---~~---------~i~~~l~~Lh~~~~~~i~h~d   65 (188)
                      .+.+++||||++++++   ..    ..++||||+++++|.+++..   ..         |++.||.|||+   .+++|+|
T Consensus        65 ~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~d  141 (311)
T 3ork_A           65 NAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQ---NGIIHRD  141 (311)
T ss_dssp             TCCCCCCTTBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCC
T ss_pred             HHHcCCCCCcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCC
Confidence            4678899999999988   22    23999999999999999822   22         99999999999   9999999


Q ss_pred             CCCCcEEEccCCceEEecccCcccccCCCCC-cceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccc
Q 039565           66 MKSTNILLNEKVQAKLADFGQSRISPVEGGT-HMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        66 l~~~nill~~~~~~kl~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      |||+||+++.++.+||+|||++......... .......|++.|++||      ++.++|+||||+++|+|++|..||..
T Consensus       142 lkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~  221 (311)
T 3ork_A          142 VKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG  221 (311)
T ss_dssp             CCGGGEEEETTSCEEECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CCHHHEEEcCCCCEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence            9999999999999999999998754322111 1223456899999999      67889999999999999999999964


Q ss_pred             cCCCC----------cC-----HHHHHHHHHHHHHccCcCCCCCCCHHH-HHHHHhh
Q 039565          139 SFKGE----------FD-----IISVEKAVEIAMASVSSKVNRRPLMNQ-VVMVREQ  179 (188)
Q Consensus       139 ~~~~~----------~~-----~~~~~~~~~l~~~cl~~~p~~Rps~~~-i~~~l~~  179 (188)
                      ....+          .+     ...+..+.+++..||+.||++||+..+ +.+.+..
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~  278 (311)
T 3ork_A          222 DSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR  278 (311)
T ss_dssp             SSHHHHHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             CChHHHHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHH
Confidence            32211          11     113567899999999999999997554 4445543

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=2.7e-33  Score=216.19  Aligned_cols=162  Identities=20%  Similarity=0.217  Sum_probs=131.3

Q ss_pred             ccccCCCeeeeccc---CC-----ccEEEEecCCCCChhhhc-CCc----c---------cHHHHHHHHhcCCCCCcEEe
Q 039565            7 NKLTGPLLVELIGK---QK-----NNALELGFRGNPELVDQQ-GKE----E---------VCCPGLEYLHQGLKHPIIQR   64 (188)
Q Consensus         7 ~~l~Hpniv~~~~~---~~-----~~~lv~e~~~~~~L~~~~-~~~----~---------~i~~~l~~Lh~~~~~~i~h~   64 (188)
                      ..++||||++++++   ..     ..++++||+. ++|.+++ ...    .         |++.||+|||+   .+++||
T Consensus        69 ~~~~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~  144 (308)
T 3g33_A           69 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA---NCIVHR  144 (308)
T ss_dssp             HHHCCTTBCCEEEEEEECCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCS
T ss_pred             hhcCCCCeEEeeeeeeccCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccC
Confidence            34569999999998   22     4789999998 5999998 221    1         99999999999   999999


Q ss_pred             CCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccc
Q 039565           65 DMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        65 dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      ||||+||+++.++.+||+|||+++...   .........|++.|+|||      ++.++|+||||+++|+|++|..||..
T Consensus       145 Dlkp~Nil~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~  221 (308)
T 3g33_A          145 DLKPENILVTSGGTVKLADFGLARIYS---YQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCG  221 (308)
T ss_dssp             CCCTTTEEECTTSCEEECSCSCTTTST---TCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCCHHHEEEcCCCCEEEeeCccccccC---CCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCC
Confidence            999999999999999999999987543   122234467889999998      68899999999999999999998853


Q ss_pred             cCCCC--------------------------------------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          139 SFKGE--------------------------------------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       139 ~~~~~--------------------------------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ....+                                      .....+..+.+++..||+.||++|||+.++++
T Consensus       222 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  296 (308)
T 3g33_A          222 NSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ  296 (308)
T ss_dssp             SSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence            22100                                      00123467789999999999999999999986

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=3e-33  Score=213.28  Aligned_cols=164  Identities=21%  Similarity=0.269  Sum_probs=134.4

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CC--cc---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GK--EE---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~--~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++   ....+++|||+++++|.+++ ..  ..         |++.||.|||+   .+++|+|+||+|
T Consensus        59 l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~N  135 (284)
T 3kk8_A           59 CRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPEN  135 (284)
T ss_dssp             HHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGG
T ss_pred             HHHcCCCCcCeEEEEEEcCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCcCcCCCCHHH
Confidence            467899999999998   77789999999999998888 22  22         99999999999   999999999999


Q ss_pred             EEEccCCc---eEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC
Q 039565           71 ILLNEKVQ---AKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK  141 (188)
Q Consensus        71 ill~~~~~---~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~  141 (188)
                      |+++.++.   ++|+|||.+....   .........|++.|++||      ++.++|+||||+++|++++|..||.....
T Consensus       136 il~~~~~~~~~~kl~Dfg~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~  212 (284)
T 3kk8_A          136 LLLASKAKGAAVKLADFGLAIEVN---DSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ  212 (284)
T ss_dssp             EEESSSSTTCCEEECCCTTCEECC---SSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             EEEecCCCCCcEEEeeceeeEEcc---cCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCch
Confidence            99986654   9999999987543   122233457888999998      58899999999999999999999843221


Q ss_pred             ---------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 ---------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 ---------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                     .......+..+.+++..||+.+|++|||++++++
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (284)
T 3kk8_A          213 HRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK  261 (284)
T ss_dssp             HHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             hHHHHHHHhccccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence                           1111234567899999999999999999999988

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=9.5e-34  Score=225.83  Aligned_cols=165  Identities=20%  Similarity=0.271  Sum_probs=129.2

Q ss_pred             ccccc--CCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLT--GPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~--Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      |.+++  ||||++++++   .+..++||| +.+++|.+++ ....           |++.||.|||+   .+|+||||||
T Consensus       108 l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp  183 (390)
T 2zmd_A          108 LNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKP  183 (390)
T ss_dssp             HHHHTTTCTTBCCEEEEEECSSEEEEEEE-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCCG
T ss_pred             HHHcccCCCeEEEEEEEEecCCEEEEEEe-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCH
Confidence            34555  5999999988   778899999 5678999998 2222           99999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-----------------CCCccchHHHHHHHHHHHh
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-----------------LTEKSDVDSFEIVILEIIT  131 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-----------------~~~~~di~s~G~~l~~~~~  131 (188)
                      +||+++ ++.+||+|||+++...............|++.|+|||                 ++.++|||||||++|+|++
T Consensus       184 ~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~  262 (390)
T 2zmd_A          184 ANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY  262 (390)
T ss_dssp             GGEEES-SSCEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHH
T ss_pred             HHEEEE-CCeEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHH
Confidence            999995 5789999999998653222222234567999999998                 3457999999999999999


Q ss_pred             CCccccccCC--------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          132 GILTVDLSFK--------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       132 g~~p~~~~~~--------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      |..||.....              ...+...+..+.+++..||+.+|.+|||++++++
T Consensus       263 G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  320 (390)
T 2zmd_A          263 GKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  320 (390)
T ss_dssp             SSCTTTTCCCHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCCcchhhhHHHHHHHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence            9999964321              1222233567899999999999999999999986

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=1e-33  Score=216.11  Aligned_cols=163  Identities=25%  Similarity=0.329  Sum_probs=136.8

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC---cc---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK---EE---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~---~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++   .+..+++|||+++++|.+++..   ..         |++.||.|||+   .+++|+||+|+|
T Consensus        68 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~N  144 (284)
T 2vgo_A           68 QSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHE---RKVIHRDIKPEN  144 (284)
T ss_dssp             HHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGG
T ss_pred             HhcCCCCCEeeEEEEEEcCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHH
Confidence            467889999999999   7788999999999999999822   22         99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC---
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK---  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~---  141 (188)
                      |+++.++.++|+|||++.....    .......|+..|++||      ++.++|+||||+++|++++|..||+....   
T Consensus       145 il~~~~~~~kl~Dfg~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~  220 (284)
T 2vgo_A          145 LLMGYKGELKIADFGWSVHAPS----LRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET  220 (284)
T ss_dssp             EEECTTCCEEECCCTTCEECSS----SCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred             EEEcCCCCEEEecccccccCcc----cccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHH
Confidence            9999999999999998864321    1123456888899998      57899999999999999999999864321   


Q ss_pred             --------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 --------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 --------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                              ...+...+..+.+++..||+.+|.+|||++++++
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~  262 (284)
T 2vgo_A          221 HRRIVNVDLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVME  262 (284)
T ss_dssp             HHHHHTTCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHhccccCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence                    1233344578899999999999999999999987

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=5.2e-34  Score=224.18  Aligned_cols=173  Identities=18%  Similarity=0.202  Sum_probs=137.6

Q ss_pred             cccccCCCeeee---------------ccc----CCccEEEEecCCCCChhhhc-CC--cc-----------cHHHHHHH
Q 039565            6 RNKLTGPLLVEL---------------IGK----QKNNALELGFRGNPELVDQQ-GK--EE-----------VCCPGLEY   52 (188)
Q Consensus         6 l~~l~Hpniv~~---------------~~~----~~~~~lv~e~~~~~~L~~~~-~~--~~-----------~i~~~l~~   52 (188)
                      +.+++||||+++               +++    ....++||||+ +++|.+++ ..  ..           |++.||.|
T Consensus        96 l~~l~h~niv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~  174 (352)
T 2jii_A           96 FQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEF  174 (352)
T ss_dssp             HHHHCCHHHHHHHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHhcccchhhhhhhhccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHH
Confidence            456788888873               333    46779999999 89999999 32  11           99999999


Q ss_pred             HhcCCCCCcEEeCCCCCcEEEccCC--ceEEecccCcccccCCCC-----CcceeeecccccccCCC------CCCccch
Q 039565           53 LHQGLKHPIIQRDMKSTNILLNEKV--QAKLADFGQSRISPVEGG-----THMSTTIAGTAGFLNTE------LTEKSDV  119 (188)
Q Consensus        53 Lh~~~~~~i~h~dl~~~nill~~~~--~~kl~d~~~~~~~~~~~~-----~~~~~~~~~~~~~~~pe------~~~~~di  119 (188)
                      ||+   .+++||||||+||+++.++  .++|+|||+++.......     ........|++.|+|||      ++.++|+
T Consensus       175 LH~---~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di  251 (352)
T 2jii_A          175 LHE---NEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDL  251 (352)
T ss_dssp             HHH---TTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHH
T ss_pred             HHh---CCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhH
Confidence            999   9999999999999999988  899999999875432111     11123347888999998      5789999


Q ss_pred             HHHHHHHHHHHhCCccccccCCCCcC----------------------HHHHHHHHHHHHHccCcCCCCCCCHHHHHHHH
Q 039565          120 DSFEIVILEIITGILTVDLSFKGEFD----------------------IISVEKAVEIAMASVSSKVNRRPLMNQVVMVR  177 (188)
Q Consensus       120 ~s~G~~l~~~~~g~~p~~~~~~~~~~----------------------~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l  177 (188)
                      ||||+++|+|++|..||.........                      ...+..+.+++..||+.+|++|||++++++.|
T Consensus       252 ~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L  331 (352)
T 2jii_A          252 QSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNL  331 (352)
T ss_dssp             HHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHH
Confidence            99999999999999999764321100                      01257899999999999999999999999999


Q ss_pred             hhccC
Q 039565          178 EQGSG  182 (188)
Q Consensus       178 ~~~~~  182 (188)
                      +++..
T Consensus       332 ~~~~~  336 (352)
T 2jii_A          332 EALLQ  336 (352)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87754

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=8.5e-34  Score=222.33  Aligned_cols=166  Identities=20%  Similarity=0.259  Sum_probs=128.8

Q ss_pred             cccccC--CCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTG--PLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~H--pniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +.+++|  |||++++++   ....++||| +.+++|.+++ ....           |++.||.|||+   .+|+||||||
T Consensus        61 l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~---~~iiHrDikp  136 (343)
T 3dbq_A           61 LNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKP  136 (343)
T ss_dssp             HHHHTTTCTTBCCEEEEEECSSEEEEEEC-CCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCG
T ss_pred             HHhhhhcCCceEEEeeeEeeCCEEEEEEe-CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCc
Confidence            455666  999999999   778899999 5568999999 2222           99999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCCC-----------------CCccchHHHHHHHHHHHh
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTEL-----------------TEKSDVDSFEIVILEIIT  131 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~-----------------~~~~di~s~G~~l~~~~~  131 (188)
                      +||+++ ++.+||+|||++................|++.|+|||.                 +.++||||||+++|+|++
T Consensus       137 ~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~  215 (343)
T 3dbq_A          137 ANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY  215 (343)
T ss_dssp             GGEEEE-TTEEEECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEE-CCcEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHh
Confidence            999997 57899999999986542222223345678999999982                 457999999999999999


Q ss_pred             CCccccccC--------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          132 GILTVDLSF--------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       132 g~~p~~~~~--------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                      |..||....              ....+...+..+.+++..||+.+|.+|||++++++.
T Consensus       216 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h  274 (343)
T 3dbq_A          216 GKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  274 (343)
T ss_dssp             SSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             CCCcchhhhhHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence            999986422              122333344678999999999999999999999863

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=1.3e-33  Score=217.29  Aligned_cols=166  Identities=22%  Similarity=0.291  Sum_probs=138.3

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCcE
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTNI   71 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~ni   71 (188)
                      +.+++||||++++++   ....++||||+++++|.+++....           |++.||.|||+   .+++|+||+|+||
T Consensus        74 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Ni  150 (303)
T 3a7i_A           74 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANV  150 (303)
T ss_dssp             HHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGE
T ss_pred             HHhCCCCCEeEEEEEEecCCeEEEEEEeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChheE
Confidence            467899999999998   788899999999999999994332           99999999999   9999999999999


Q ss_pred             EEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC-----
Q 039565           72 LLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF-----  140 (188)
Q Consensus        72 ll~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~-----  140 (188)
                      +++.++.++|+|||.+......  ........|+..|++||      ++.++|+||||+++|++++|..||....     
T Consensus       151 l~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~  228 (303)
T 3a7i_A          151 LLSEHGEVKLADFGVAGQLTDT--QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVL  228 (303)
T ss_dssp             EECTTSCEEECCCTTCEECBTT--BCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH
T ss_pred             EECCCCCEEEeecccceecCcc--ccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHH
Confidence            9999999999999998754321  11233456888899998      5789999999999999999999986421     


Q ss_pred             -------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          141 -------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       141 -------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                             ....+...+..+.+++..||+.+|.+|||++++++.
T Consensus       229 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  271 (303)
T 3a7i_A          229 FLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH  271 (303)
T ss_dssp             HHHHHSCCCCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred             HHhhcCCCCCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence                   112223345678999999999999999999999873

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=3.7e-33  Score=228.06  Aligned_cols=164  Identities=23%  Similarity=0.257  Sum_probs=134.5

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc---CCcc---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ---GKEE---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~---~~~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++   ....++|+||+.+++|.+++   ....         |++.||.|||+   .+|+||||||+|
T Consensus        75 l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~N  151 (486)
T 3mwu_A           75 LKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPEN  151 (486)
T ss_dssp             HHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGG
T ss_pred             HHhCCCCCcCeEEEEEEcCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHH
Confidence            567899999999999   77889999999999999888   2222         99999999999   999999999999


Q ss_pred             EEEc---cCCceEEecccCcccccCCCCCcceeeecccccccCCC-----CCCccchHHHHHHHHHHHhCCccccccCC-
Q 039565           71 ILLN---EKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-----LTEKSDVDSFEIVILEIITGILTVDLSFK-  141 (188)
Q Consensus        71 ill~---~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-----~~~~~di~s~G~~l~~~~~g~~p~~~~~~-  141 (188)
                      |+++   .++.+||+|||++.....   ........|++.|+|||     ++.++||||+|+++|+|++|..||..... 
T Consensus       152 il~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~  228 (486)
T 3mwu_A          152 ILLESKEKDCDIKIIDFGLSTCFQQ---NTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEY  228 (486)
T ss_dssp             EEESSSSTTCCEEECSCSCTTTBCC---C----CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             EEEecCCCCCCEEEEECCcCeECCC---CCccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            9995   456799999999875431   12233457899999999     67899999999999999999999854321 


Q ss_pred             --------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 --------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 --------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                    .+.....+..+.+++..||+.+|.+|||+.++++
T Consensus       229 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~  276 (486)
T 3mwu_A          229 DILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (486)
T ss_dssp             HHHHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence                          1111234567899999999999999999999998

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=3e-33  Score=217.18  Aligned_cols=164  Identities=23%  Similarity=0.339  Sum_probs=134.1

Q ss_pred             cccccCCCeeeeccc--CCccEEEEecCCCCChhhhcCCc-c-----------cHHHHHHHHhcCCCCCcEEeCCCCCcE
Q 039565            6 RNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQGKE-E-----------VCCPGLEYLHQGLKHPIIQRDMKSTNI   71 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~~~~-~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~ni   71 (188)
                      +.+++||||++++++  .+..++||||+++++|.+++... .           |++.||.|||+   .+++|+||||+||
T Consensus        69 l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~NI  145 (322)
T 2ycf_A           69 LKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENV  145 (322)
T ss_dssp             HHHCCCTTBCCEEEEEESSSEEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGE
T ss_pred             HHhCCCCCCceEeeEEcCCceEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHE
Confidence            567899999999999  66789999999999999988322 2           99999999999   9999999999999


Q ss_pred             EEccCCc---eEEecccCcccccCCCCCcceeeecccccccCCC---------CCCccchHHHHHHHHHHHhCCcccccc
Q 039565           72 LLNEKVQ---AKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE---------LTEKSDVDSFEIVILEIITGILTVDLS  139 (188)
Q Consensus        72 ll~~~~~---~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe---------~~~~~di~s~G~~l~~~~~g~~p~~~~  139 (188)
                      +++.++.   +||+|||++....   .........|+..|++||         ++.++|+||||+++|++++|..||...
T Consensus       146 l~~~~~~~~~~kl~Dfg~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  222 (322)
T 2ycf_A          146 LLSSQEEDCLIKITDFGHSKILG---ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH  222 (322)
T ss_dssp             EESSSSSSCCEEECCCTTCEECC---CCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCST
T ss_pred             EEecCCCCCeEEEccCccceecc---cccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence            9987654   9999999987542   112223456888999998         467899999999999999999999654


Q ss_pred             CCCC------------cC----HHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          140 FKGE------------FD----IISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       140 ~~~~------------~~----~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ....            ..    ...+..+.+++..||+.+|++|||++++++
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          223 RTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             TCSSCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             chHHHHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence            3221            11    123567899999999999999999999885

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=1.1e-33  Score=231.02  Aligned_cols=164  Identities=21%  Similarity=0.246  Sum_probs=137.0

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++   ....++|+||+.+++|.+++ .+..           |++.||.|||+   .+++||||||+|
T Consensus        80 l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~N  156 (484)
T 3nyv_A           80 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK---NKIVHRDLKPEN  156 (484)
T ss_dssp             HTTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGG
T ss_pred             HHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHH
Confidence            567899999999999   77889999999999999988 3322           99999999999   999999999999


Q ss_pred             EEE---ccCCceEEecccCcccccCCCCCcceeeecccccccCCC-----CCCccchHHHHHHHHHHHhCCccccccCC-
Q 039565           71 ILL---NEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-----LTEKSDVDSFEIVILEIITGILTVDLSFK-  141 (188)
Q Consensus        71 ill---~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-----~~~~~di~s~G~~l~~~~~g~~p~~~~~~-  141 (188)
                      |++   +.++.+||+|||++......   .......|++.|+|||     ++.++|+||+|+++|+|++|..||..... 
T Consensus       157 il~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~  233 (484)
T 3nyv_A          157 LLLESKSKDANIRIIDFGLSTHFEAS---KKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEY  233 (484)
T ss_dssp             EEESSSSTTCCEEECCTTHHHHBCCC---CSHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             EEEecCCCCCcEEEEeeeeeEEcccc---cccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCHH
Confidence            999   45788999999998754311   1233457899999998     78999999999999999999999964321 


Q ss_pred             --------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 --------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 --------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                    .+.....+..+.+++..||+.+|.+|||++++++
T Consensus       234 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  281 (484)
T 3nyv_A          234 DILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALD  281 (484)
T ss_dssp             HHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence                          1111235678899999999999999999999987

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=1.7e-33  Score=227.02  Aligned_cols=171  Identities=20%  Similarity=0.205  Sum_probs=130.5

Q ss_pred             cccccCCCeeeeccc---C-----CccEEEEecCCCCChhhhc-CCc--c---------cHHHHHHHHhcCCCCCcEEeC
Q 039565            6 RNKLTGPLLVELIGK---Q-----KNNALELGFRGNPELVDQQ-GKE--E---------VCCPGLEYLHQGLKHPIIQRD   65 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~-----~~~~lv~e~~~~~~L~~~~-~~~--~---------~i~~~l~~Lh~~~~~~i~h~d   65 (188)
                      |.+++||||++++++   .     ...++||||++ ++|.+++ ...  .         |++.||.|||+   .+|+|||
T Consensus        79 l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~---~givHrD  154 (432)
T 3n9x_A           79 LNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHE---SGIIHRD  154 (432)
T ss_dssp             HHHCCCTTBCCEEEECCCSCTTTCCCEEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCC
T ss_pred             HHHcCCCCcceEEEEEecCCCCcCCeEEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCC
Confidence            567899999999998   2     56899999998 5999998 322  2         99999999999   9999999


Q ss_pred             CCCCcEEEccCCceEEecccCcccccCCCCC--------------------cceeeecccccccCCC-------CCCccc
Q 039565           66 MKSTNILLNEKVQAKLADFGQSRISPVEGGT--------------------HMSTTIAGTAGFLNTE-------LTEKSD  118 (188)
Q Consensus        66 l~~~nill~~~~~~kl~d~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~pe-------~~~~~d  118 (188)
                      |||+||+++.++.+||+|||+++........                    .......||..|+|||       ++.++|
T Consensus       155 lkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~D  234 (432)
T 3n9x_A          155 LKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSID  234 (432)
T ss_dssp             CCGGGEEECTTCCEEECCCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHH
T ss_pred             CCHHHeEECCCCCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccc
Confidence            9999999999999999999999864322111                    1224567899999999       578899


Q ss_pred             hHHHHHHHHHHHhCCccccc-----------cCCC---------------------------------------------
Q 039565          119 VDSFEIVILEIITGILTVDL-----------SFKG---------------------------------------------  142 (188)
Q Consensus       119 i~s~G~~l~~~~~g~~p~~~-----------~~~~---------------------------------------------  142 (188)
                      +||+||++|+|++|..|+..           ...-                                             
T Consensus       235 iwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~  314 (432)
T 3n9x_A          235 IWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIK  314 (432)
T ss_dssp             HHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHH
T ss_pred             cchHHHHHHHHHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHH
Confidence            99999999999986544321           1000                                             


Q ss_pred             ---------CcC-----HHHHHHHHHHHHHccCcCCCCCCCHHHHHH--HHhhc
Q 039565          143 ---------EFD-----IISVEKAVEIAMASVSSKVNRRPLMNQVVM--VREQG  180 (188)
Q Consensus       143 ---------~~~-----~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~--~l~~~  180 (188)
                               ..+     ...+..+.+++..||+.||++|||++++++  .+++.
T Consensus       315 ~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~  368 (432)
T 3n9x_A          315 YIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDV  368 (432)
T ss_dssp             HHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTT
T ss_pred             HHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhc
Confidence                     000     113567889999999999999999999987  34444

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=2.9e-34  Score=226.08  Aligned_cols=164  Identities=21%  Similarity=0.299  Sum_probs=133.5

Q ss_pred             CcccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC---cc---------cHHHHHHHHhcCCCC-CcEEeCCCC
Q 039565            5 NRNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK---EE---------VCCPGLEYLHQGLKH-PIIQRDMKS   68 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~---~~---------~i~~~l~~Lh~~~~~-~i~h~dl~~   68 (188)
                      .+.+++||||++++++   ....++||||+++++|.+++.+   ..         |++.||.|||+   . +++|+||||
T Consensus        84 ~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~---~~~i~H~dlkp  160 (360)
T 3eqc_A           84 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE---KHKIMHRDVKP  160 (360)
T ss_dssp             GGGGCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---HHCCCCSCCSG
T ss_pred             HHHHCCCCCEEEEeEEEEECCEEEEEEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---hCCEEcCCccH
Confidence            3677899999999998   7889999999999999999922   22         99999999998   6 899999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCC
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKG  142 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~  142 (188)
                      +||+++.++.++|+|||++.....    .......|+..|++||      ++.++|+||||+++|+|++|..||......
T Consensus       161 ~Nil~~~~~~~kl~Dfg~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~  236 (360)
T 3eqc_A          161 SNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK  236 (360)
T ss_dssp             GGEEECTTCCEEECCCCCCHHHHH----HC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHH
T ss_pred             HHEEECCCCCEEEEECCCCccccc----ccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            999999999999999998864321    1223456888999998      578899999999999999999998542210


Q ss_pred             C-------------------------------------------------------cCHHHHHHHHHHHHHccCcCCCCC
Q 039565          143 E-------------------------------------------------------FDIISVEKAVEIAMASVSSKVNRR  167 (188)
Q Consensus       143 ~-------------------------------------------------------~~~~~~~~~~~l~~~cl~~~p~~R  167 (188)
                      +                                                       .....+..+.+++..||+.+|++|
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  316 (360)
T 3eqc_A          237 ELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAER  316 (360)
T ss_dssp             HHHHHHC------------------------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTS
T ss_pred             HHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhC
Confidence            0                                                       001134578899999999999999


Q ss_pred             CCHHHHHH
Q 039565          168 PLMNQVVM  175 (188)
Q Consensus       168 ps~~~i~~  175 (188)
                      ||++++++
T Consensus       317 pt~~ell~  324 (360)
T 3eqc_A          317 ADLKQLMV  324 (360)
T ss_dssp             CCHHHHHT
T ss_pred             CCHHHHhh
Confidence            99999987

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=9.4e-34  Score=221.41  Aligned_cols=165  Identities=21%  Similarity=0.313  Sum_probs=137.5

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC---cc---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK---EE---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~---~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++   .+..+++|||+++++|.+++..   ..         |++.||.|||+   .+++|+||||+|
T Consensus        95 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~N  171 (335)
T 2owb_A           95 HRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGN  171 (335)
T ss_dssp             HHTCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGG
T ss_pred             HHhCCCCCCCeEEEEEecCCeEEEEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCCEecCCCchh
Confidence            467899999999999   7788999999999999998822   22         99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC---
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK---  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~---  141 (188)
                      |+++.++.++|+|||++.......  .......|+..|++||      ++.++|+||||+++|+|++|..||.....   
T Consensus       172 Il~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~  249 (335)
T 2owb_A          172 LFLNEDLEVKIGDFGLATKVEYDG--ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET  249 (335)
T ss_dssp             EEECTTCCEEECCCTTCEECCSTT--CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred             EEEcCCCCEEEeeccCceecccCc--ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHH
Confidence            999999999999999987543211  2233456888999998      57899999999999999999999865321   


Q ss_pred             --------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 --------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 --------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                              ...+......+.+++..||+.||++|||++++++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  291 (335)
T 2owb_A          250 YLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLN  291 (335)
T ss_dssp             HHHHHHTCCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             HHHHhcCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                    1122334567889999999999999999999987

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=1.1e-33  Score=216.95  Aligned_cols=165  Identities=21%  Similarity=0.313  Sum_probs=137.5

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC---cc---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK---EE---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~---~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++   .+..+++|||+++++|.+++.+   ..         |++.||.|||+   .+++|+|++|+|
T Consensus        69 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~N  145 (294)
T 2rku_A           69 HRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGN  145 (294)
T ss_dssp             HHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGG
T ss_pred             HHhCCCCCEeeeeeeeccCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHh
Confidence            467899999999999   7778999999999999998822   22         99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC---
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK---  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~---  141 (188)
                      |+++.++.++|+|||.+.......  .......|+..|++||      ++.++|+||||+++|++++|..||+....   
T Consensus       146 il~~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~  223 (294)
T 2rku_A          146 LFLNEDLEVKIGDFGLATKVEYDG--ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET  223 (294)
T ss_dssp             EEECTTCCEEECCCTTCEECCSTT--CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred             EEEcCCCCEEEEeccCceecccCc--cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            999999999999999987543221  1233456888899998      57899999999999999999999865321   


Q ss_pred             --------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 --------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 --------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                              ...+...+..+.+++..||+.+|++|||++++++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~  265 (294)
T 2rku_A          224 YLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLN  265 (294)
T ss_dssp             HHHHHTTCCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             HHHHhhccCCCccccCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence                    1223344567899999999999999999999987

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=2e-33  Score=231.86  Aligned_cols=165  Identities=19%  Similarity=0.247  Sum_probs=137.0

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc----c-----------cHHHHHHHHhcCCCCCcEEeCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE----E-----------VCCPGLEYLHQGLKHPIIQRDM   66 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~----~-----------~i~~~l~~Lh~~~~~~i~h~dl   66 (188)
                      +.+++||||++++++   ....++||||+++|+|..++ ...    .           |++.||.|||+   .+|+||||
T Consensus       239 L~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~---~gIvHrDL  315 (543)
T 3c4z_A          239 LAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRDL  315 (543)
T ss_dssp             HHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCC
T ss_pred             HHhcCCCCEeeEEEEEeeCCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHH---cCCcccCC
Confidence            567899999999988   77899999999999999988 321    1           99999999999   99999999


Q ss_pred             CCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           67 KSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        67 ~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      ||+||+++.++.+||+|||+++....  .........||+.|+|||      ++.++|+|||||++|+|++|..||....
T Consensus       316 KP~NILl~~~g~vkL~DFGla~~~~~--~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~  393 (543)
T 3c4z_A          316 KPENVLLDDDGNVRISDLGLAVELKA--GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARG  393 (543)
T ss_dssp             CGGGEEECTTSCEEECCCTTCEECCT--TCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTT
T ss_pred             ChHHEEEeCCCCEEEeecceeeeccC--CCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCc
Confidence            99999999999999999999986432  112233468999999999      6889999999999999999999996542


Q ss_pred             C---------------CCcCHHHHHHHHHHHHHccCcCCCCCCCH-----HHHHH
Q 039565          141 K---------------GEFDIISVEKAVEIAMASVSSKVNRRPLM-----NQVVM  175 (188)
Q Consensus       141 ~---------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~-----~~i~~  175 (188)
                      .               ..++...+..+.+++..||+.+|++||++     ++|++
T Consensus       394 ~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~  448 (543)
T 3c4z_A          394 EKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT  448 (543)
T ss_dssp             CCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred             cchhHHHHHHHHhhcccCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence            2               11333456688999999999999999975     66654

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=3.9e-33  Score=216.94  Aligned_cols=164  Identities=16%  Similarity=0.191  Sum_probs=133.3

Q ss_pred             ccccc-CCCeeeeccc-----CCccEEEEecCCCCChhhhcCCcc---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLT-GPLLVELIGK-----QKNNALELGFRGNPELVDQQGKEE---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~-Hpniv~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++ ||||++++++     ....+++|||+.+++|..+++...         |++.||.|||+   .+++||||||+|
T Consensus        84 l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~N  160 (330)
T 3nsz_A           84 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHN  160 (330)
T ss_dssp             HHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGG
T ss_pred             HHHcCCCCCEEEeeeeeccCCCCceEEEEeccCchhHHHHHHhCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHH
Confidence            44565 9999999998     456789999999999999984443         99999999999   999999999999


Q ss_pred             EEEccCC-ceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCCC
Q 039565           71 ILLNEKV-QAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFKG  142 (188)
Q Consensus        71 ill~~~~-~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~  142 (188)
                      |+++.++ .++|+|||+++.....   .......++..|++||       ++.++|+||||+++|+|++|..||......
T Consensus       161 il~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~  237 (330)
T 3nsz_A          161 VMIDHEHRKLRLIDWGLAEFYHPG---QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN  237 (330)
T ss_dssp             EEEETTTTEEEECCCTTCEECCTT---CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH
T ss_pred             EEEcCCCCEEEEEeCCCceEcCCC---CccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCch
Confidence            9999776 8999999999754321   1233456788899987       578899999999999999999988432110


Q ss_pred             -------------------------------------------------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHH
Q 039565          143 -------------------------------------------------EFDIISVEKAVEIAMASVSSKVNRRPLMNQV  173 (188)
Q Consensus       143 -------------------------------------------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i  173 (188)
                                                                       +.....+..+.+++..||+.||++|||++++
T Consensus       238 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~  317 (330)
T 3nsz_A          238 YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA  317 (330)
T ss_dssp             HHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred             HHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHH
Confidence                                                             0011146788999999999999999999999


Q ss_pred             HH
Q 039565          174 VM  175 (188)
Q Consensus       174 ~~  175 (188)
                      ++
T Consensus       318 l~  319 (330)
T 3nsz_A          318 ME  319 (330)
T ss_dssp             HT
T ss_pred             hc
Confidence            87

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=3.5e-33  Score=229.16  Aligned_cols=164  Identities=27%  Similarity=0.350  Sum_probs=136.5

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-C--Ccc---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-G--KEE---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~--~~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++   ....++||||+++|+|.+++ .  ...         |++.||.|||+   .+++||||||+|
T Consensus       100 l~~l~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~N  176 (504)
T 3q5i_A          100 LKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHK---HNIVHRDIKPEN  176 (504)
T ss_dssp             HHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGG
T ss_pred             HHhCCCCCCCeEEEEEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCcHHH
Confidence            467899999999999   77889999999999999988 2  222         99999999999   999999999999


Q ss_pred             EEEccCC---ceEEecccCcccccCCCCCcceeeecccccccCCC-----CCCccchHHHHHHHHHHHhCCccccccCCC
Q 039565           71 ILLNEKV---QAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-----LTEKSDVDSFEIVILEIITGILTVDLSFKG  142 (188)
Q Consensus        71 ill~~~~---~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-----~~~~~di~s~G~~l~~~~~g~~p~~~~~~~  142 (188)
                      |+++.++   .+||+|||++.....   ........|++.|+|||     ++.++|+||+|+++|+|++|..||......
T Consensus       177 il~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~  253 (504)
T 3q5i_A          177 ILLENKNSLLNIKIVDFGLSSFFSK---DYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ  253 (504)
T ss_dssp             EEESSTTCCSSEEECCCTTCEECCT---TSCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             EEEecCCCCccEEEEECCCCEEcCC---CCccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            9998775   699999999976431   12234457899999998     688999999999999999999999653221


Q ss_pred             C-----------cC----HHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          143 E-----------FD----IISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       143 ~-----------~~----~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      +           .+    ...+..+.+++..||+.+|.+|||++++++
T Consensus       254 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~  301 (504)
T 3q5i_A          254 DIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN  301 (504)
T ss_dssp             HHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            1           11    123567899999999999999999999986

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=6.7e-34  Score=228.11  Aligned_cols=165  Identities=19%  Similarity=0.170  Sum_probs=134.8

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC----cc---------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK----EE---------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~----~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||++++++   .+..++||||+++|+|.+++.+    ..         |++.||+|||+   .+|+||||||+
T Consensus       115 l~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~  191 (412)
T 2vd5_A          115 LVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHR---LGYVHRDIKPD  191 (412)
T ss_dssp             HHHSCTTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGG
T ss_pred             HHhcCCCCeeeEEEEEeeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccCHH
Confidence            456789999999988   7788999999999999999922    22         99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------------CCCccchHHHHHHHHHHHhCCccc
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------------LTEKSDVDSFEIVILEIITGILTV  136 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------------~~~~~di~s~G~~l~~~~~g~~p~  136 (188)
                      ||+++.++.+||+|||+++.... ..........||+.|+|||             ++.++|+|||||++|+|++|..||
T Consensus       192 NILld~~g~vkL~DFGla~~~~~-~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf  270 (412)
T 2vd5_A          192 NILLDRCGHIRLADFGSCLKLRA-DGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPF  270 (412)
T ss_dssp             GEEECTTSCEEECCCTTCEECCT-TSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             HeeecCCCCEEEeechhheeccC-CCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCC
Confidence            99999999999999999976432 2222233467999999998             367899999999999999999999


Q ss_pred             cccCCC-------------Cc---CHHHHHHHHHHHHHccCcCCCCC---CCHHHHHH
Q 039565          137 DLSFKG-------------EF---DIISVEKAVEIAMASVSSKVNRR---PLMNQVVM  175 (188)
Q Consensus       137 ~~~~~~-------------~~---~~~~~~~~~~l~~~cl~~~p~~R---ps~~~i~~  175 (188)
                      ......             ..   +...+..+.+++..||. +|.+|   |+++++++
T Consensus       271 ~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~  327 (412)
T 2vd5_A          271 YADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT  327 (412)
T ss_dssp             CCSSHHHHHHHHHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred             CCCCHHHHHHHHHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence            643211             11   12345688999999999 99998   58999876

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=2.9e-33  Score=220.28  Aligned_cols=159  Identities=22%  Similarity=0.260  Sum_probs=129.2

Q ss_pred             cccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc----c---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            8 KLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE----E---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         8 ~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~----~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      .++||||++++++   .+..++||||+ +++|.+++ ...    .         |++.||.|||+   .+|+||||||+|
T Consensus        92 ~~~h~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~N  167 (360)
T 3llt_A           92 DINNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRK---MSLTHTDLKPEN  167 (360)
T ss_dssp             STTGGGBCCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGG
T ss_pred             CCCCCCeecccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCccc
Confidence            3469999999998   78899999999 78999999 221    1         99999999999   999999999999


Q ss_pred             EEEcc-------------------------CCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccch
Q 039565           71 ILLNE-------------------------KVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDV  119 (188)
Q Consensus        71 ill~~-------------------------~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di  119 (188)
                      |+++.                         ++.+||+|||++.....     ......|++.|+|||      ++.++||
T Consensus       168 Ill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Di  242 (360)
T 3llt_A          168 ILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD-----YHGSIINTRQYRAPEVILNLGWDVSSDM  242 (360)
T ss_dssp             EEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS-----CCCSCCSCGGGCCHHHHTTCCCCTTHHH
T ss_pred             EEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCC-----CCcCccCcccccCcHHHcCCCCCCccch
Confidence            99975                         78899999999875321     123456888999998      6889999


Q ss_pred             HHHHHHHHHHHhCCccccccCCC-----------CcCHH-----------------------------------------
Q 039565          120 DSFEIVILEIITGILTVDLSFKG-----------EFDII-----------------------------------------  147 (188)
Q Consensus       120 ~s~G~~l~~~~~g~~p~~~~~~~-----------~~~~~-----------------------------------------  147 (188)
                      |||||++|+|++|..||......           ..+..                                         
T Consensus       243 wslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  322 (360)
T 3llt_A          243 WSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLP  322 (360)
T ss_dssp             HHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCC
T ss_pred             HHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhccc
Confidence            99999999999999998542210           00000                                         


Q ss_pred             -----HHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          148 -----SVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       148 -----~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                           ....+.+++..||+.||.+|||++++++
T Consensus       323 ~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~  355 (360)
T 3llt_A          323 LYKIIKHELFCDFLYSILQIDPTLRPSPAELLK  355 (360)
T ss_dssp             HHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             ccccchHHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence                 0145779999999999999999999875

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.4e-33  Score=219.10  Aligned_cols=165  Identities=22%  Similarity=0.261  Sum_probs=133.6

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||++++++   ....++||||+++ +|..++ ....            |++.||.|||+   .+++||||||+
T Consensus        66 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~  141 (346)
T 1ua2_A           66 LQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPN  141 (346)
T ss_dssp             HHHCCCTTBCCEEEEECCTTCCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGG
T ss_pred             HhhCCCCCCCeEEEEEeeCCceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCCHH
Confidence            467889999999998   7889999999995 888888 3221            99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCC-
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFK-  141 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~-  141 (188)
                      ||+++.++.+||+|||++......  ........+++.|+|||       ++.++|+||||+++|+|++|..||..... 
T Consensus       142 Nil~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~  219 (346)
T 1ua2_A          142 NLLLDENGVLKLADFGLAKSFGSP--NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL  219 (346)
T ss_dssp             GEEECTTCCEEECCCGGGSTTTSC--CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             HEEEcCCCCEEEEecccceeccCC--cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH
Confidence            999999999999999998754321  12233456888999998       46689999999999999999988753211 


Q ss_pred             ---------------CCc------------------C-----HHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          142 ---------------GEF------------------D-----IISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       142 ---------------~~~------------------~-----~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                                     ..+                  +     ...+..+.+++..||+.||++|||++++++.
T Consensus       220 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  292 (346)
T 1ua2_A          220 DQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM  292 (346)
T ss_dssp             HHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             HHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence                           000                  0     1234678999999999999999999999873

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=1.4e-33  Score=216.69  Aligned_cols=168  Identities=24%  Similarity=0.309  Sum_probs=133.4

Q ss_pred             CcccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC--------c---c---------cHHHHHHHHhcCCCCCc
Q 039565            5 NRNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK--------E---E---------VCCPGLEYLHQGLKHPI   61 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~--------~---~---------~i~~~l~~Lh~~~~~~i   61 (188)
                      .+.+++||||++++++   .+..+++|||+++++|.+++..        .   .         |++.||.|||+   .++
T Consensus        66 ~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i  142 (303)
T 2vwi_A           66 AMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK---NGQ  142 (303)
T ss_dssp             CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHH---TTC
T ss_pred             HHhhcCCCCEeeEEEEEeecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCC
Confidence            4677899999999998   7889999999999999998831        1   1         99999999999   999


Q ss_pred             EEeCCCCCcEEEccCCceEEecccCcccccCCCC---CcceeeecccccccCCC-------CCCccchHHHHHHHHHHHh
Q 039565           62 IQRDMKSTNILLNEKVQAKLADFGQSRISPVEGG---THMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIIT  131 (188)
Q Consensus        62 ~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~---~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~  131 (188)
                      +|+||+|+||+++.++.++|+|||.+........   ........|++.|++||       ++.++|+||||+++|++++
T Consensus       143 ~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~  222 (303)
T 2vwi_A          143 IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELAT  222 (303)
T ss_dssp             CCCCCSGGGEEECTTCCEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHH
T ss_pred             CCCCCChhhEEEcCCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHh
Confidence            9999999999999999999999998875432111   11223456888999998       5889999999999999999


Q ss_pred             CCccccccCCC---------------------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          132 GILTVDLSFKG---------------------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       132 g~~p~~~~~~~---------------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      |..||......                     +.....+..+.+++..||+.+|.+|||++++++
T Consensus       223 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  287 (303)
T 2vwi_A          223 GAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR  287 (303)
T ss_dssp             SSCTTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             CCCCCccCchhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence            99998642110                     011123457889999999999999999999987

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=5.4e-33  Score=214.94  Aligned_cols=164  Identities=20%  Similarity=0.233  Sum_probs=129.3

Q ss_pred             ccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CC--cc---------cHHHHHHHHhcCCCCCcEEeCCCCCcEEE
Q 039565            9 LTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GK--EE---------VCCPGLEYLHQGLKHPIIQRDMKSTNILL   73 (188)
Q Consensus         9 l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~--~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~nill   73 (188)
                      .+||||++++++   .+..++||||+++++|.+++ ..  ..         |++.||.|||+   .+++||||||+||++
T Consensus        68 ~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nil~  144 (316)
T 2ac3_A           68 QGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILC  144 (316)
T ss_dssp             CCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEE
T ss_pred             cCCCCeeeEEEEEeeCCEEEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEE
Confidence            479999999999   78899999999999999999 22  22         99999999999   999999999999999


Q ss_pred             ccCCc---eEEecccCcccccCCCC-----CcceeeecccccccCCC-----------CCCccchHHHHHHHHHHHhCCc
Q 039565           74 NEKVQ---AKLADFGQSRISPVEGG-----THMSTTIAGTAGFLNTE-----------LTEKSDVDSFEIVILEIITGIL  134 (188)
Q Consensus        74 ~~~~~---~kl~d~~~~~~~~~~~~-----~~~~~~~~~~~~~~~pe-----------~~~~~di~s~G~~l~~~~~g~~  134 (188)
                      +.++.   +||+|||++........     ........|+..|+|||           ++.++|+||||+++|+|++|..
T Consensus       145 ~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~  224 (316)
T 2ac3_A          145 EHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYP  224 (316)
T ss_dssp             SCSSSSCSEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSC
T ss_pred             ccCCCcCceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCC
Confidence            88765   99999999875431111     11122346889999998           4678999999999999999999


Q ss_pred             cccccCCC--------------------------CcCH----HHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          135 TVDLSFKG--------------------------EFDI----ISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       135 p~~~~~~~--------------------------~~~~----~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ||......                          ..+.    ..+..+.+++..||+.||.+|||++++++
T Consensus       225 pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  295 (316)
T 2ac3_A          225 PFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ  295 (316)
T ss_dssp             SCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CCcccccccccccccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence            99654221                          1111    13457889999999999999999999988

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=1.9e-33  Score=213.53  Aligned_cols=169  Identities=20%  Similarity=0.299  Sum_probs=130.9

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcC---Ccc---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQG---KEE---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~---~~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++   ....++++||+++++|.+++.   ...         |++.||.|||+   .+++|+|++|+|
T Consensus        65 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~N  141 (276)
T 2h6d_A           65 LKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR---HMVVHRDLKPEN  141 (276)
T ss_dssp             HHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH---HCSSCCCCCGGG
T ss_pred             HhcCCCCCEeEEEEEEecCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChhh
Confidence            567889999999999   788899999999999999982   222         99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCCC-------CCccchHHHHHHHHHHHhCCccccccCC--
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTEL-------TEKSDVDSFEIVILEIITGILTVDLSFK--  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~-------~~~~di~s~G~~l~~~~~g~~p~~~~~~--  141 (188)
                      |+++.++.++++|||++.....   ........+++.|++||.       +.++|+||||+++|++++|..||+....  
T Consensus       142 il~~~~~~~~l~dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~  218 (276)
T 2h6d_A          142 VLLDAHMNAKIADFGLSNMMSD---GEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT  218 (276)
T ss_dssp             EEECTTSCEEECCCCGGGCCCC----------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             EEECCCCCEEEeecccccccCC---CcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH
Confidence            9999999999999999875431   112234567888999992       4689999999999999999999865321  


Q ss_pred             ---------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH--Hhhc
Q 039565          142 ---------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMV--REQG  180 (188)
Q Consensus       142 ---------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~--l~~~  180 (188)
                               ...+...+..+.+++..||+.+|.+|||++++++.  +++.
T Consensus       219 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~  268 (276)
T 2h6d_A          219 LFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQD  268 (276)
T ss_dssp             HHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             HHHHhhcCcccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhChhhccC
Confidence                     11222345678999999999999999999999983  4443

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=5.4e-33  Score=214.77  Aligned_cols=165  Identities=23%  Similarity=0.273  Sum_probs=137.0

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcC--Cc--c---------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQG--KE--E---------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~--~~--~---------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||++++++   ....+++|||+++++|.+++.  ..  .         |++.||.|||+   .+++|+|++|+
T Consensus        78 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dl~p~  154 (314)
T 3com_A           78 MQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAG  154 (314)
T ss_dssp             HHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGG
T ss_pred             HHhCCCCCCccEEEEEEeCCEEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCcCHH
Confidence            467899999999998   778899999999999999982  21  1         99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC--
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK--  141 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~--  141 (188)
                      ||+++.++.++|+|||.+.....  .........|+..|++||      ++.++|+||||+++|++++|..||.....  
T Consensus       155 Nil~~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~  232 (314)
T 3com_A          155 NILLNTEGHAKLADFGVAGQLTD--TMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR  232 (314)
T ss_dssp             GEEECTTCCEEECCCTTCEECBT--TBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH
T ss_pred             HEEECCCCCEEEeecccchhhhh--hccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH
Confidence            99999999999999999875431  111233456888899998      58899999999999999999999864211  


Q ss_pred             ------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 ------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 ------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                  ...+...+..+.+++..||+.+|.+|||++++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          233 AIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ  278 (314)
T ss_dssp             HHHHHHHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             HHHHHhcCCCcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence                        1122334678999999999999999999999986

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=4.2e-33  Score=220.30  Aligned_cols=163  Identities=21%  Similarity=0.300  Sum_probs=134.1

Q ss_pred             ccc-cCCCeeeeccc---CCccEEEEecCCCCChhhhcC-C--cc---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            7 NKL-TGPLLVELIGK---QKNNALELGFRGNPELVDQQG-K--EE---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         7 ~~l-~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~-~--~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      .++ +||||++++++   ....++||||+++++|.+++. .  ..         |++.||.|||+   .+++|+|+||.|
T Consensus       154 ~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~---~gi~H~Dlkp~N  230 (365)
T 2y7j_A          154 RQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPEN  230 (365)
T ss_dssp             HHHTTCTTBCCEEEEEEBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGG
T ss_pred             HHhcCCCCEeEEEEEEeeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHH
Confidence            345 79999999998   788899999999999999982 2  22         99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------------CCCccchHHHHHHHHHHHhCCccccc
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------------LTEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------------~~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      |+++.++.++++|||++.....   ........|++.|++||            ++.++|+||||+++|+|++|..||..
T Consensus       231 Il~~~~~~ikl~DfG~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~  307 (365)
T 2y7j_A          231 ILLDDNMQIRLSDFGFSCHLEP---GEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWH  307 (365)
T ss_dssp             EEECTTCCEEECCCTTCEECCT---TCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             EEECCCCCEEEEecCcccccCC---CcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCC
Confidence            9999999999999999875431   12233467889999998            45689999999999999999999854


Q ss_pred             cCC-----------CCcCH----HHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          139 SFK-----------GEFDI----ISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       139 ~~~-----------~~~~~----~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ...           ...+.    ..+..+.+++..||+.+|++|||++++++
T Consensus       308 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  359 (365)
T 2y7j_A          308 RRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ  359 (365)
T ss_dssp             SSHHHHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            321           01111    12456899999999999999999999986

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.98  E-value=1.4e-34  Score=220.13  Aligned_cols=169  Identities=21%  Similarity=0.288  Sum_probs=137.1

Q ss_pred             cccccCCCeeeeccc-----CCccEEEEecCCCCChhhhcCC-------cc---------cHHHHHHHHhcCCCCC----
Q 039565            6 RNKLTGPLLVELIGK-----QKNNALELGFRGNPELVDQQGK-------EE---------VCCPGLEYLHQGLKHP----   60 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-----~~~~~lv~e~~~~~~L~~~~~~-------~~---------~i~~~l~~Lh~~~~~~----   60 (188)
                      +.+++||||++++++     ....+++|||+++++|.+++..       ..         |++.||.|||+   .+    
T Consensus        59 l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~  135 (279)
T 2w5a_A           59 LRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR---RSDGGH  135 (279)
T ss_dssp             HHHCCCTTBCCEEEEEEEGGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---HC----
T ss_pred             HHhcCCCCCCeEEEEEecCCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhc---ccCCCC
Confidence            567899999999986     5678999999999999999821       11         99999999999   77    


Q ss_pred             -cEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCC
Q 039565           61 -IIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGI  133 (188)
Q Consensus        61 -i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~  133 (188)
                       ++|+||+|+||+++.++.++|+|||.+.....  .........|+..|++||      ++.++|+||||+++|++++|.
T Consensus       136 ~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~  213 (279)
T 2w5a_A          136 TVLHRDLKPANVFLDGKQNVKLGDFGLARILNH--DTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALM  213 (279)
T ss_dssp             --CCCCCSGGGEEECSSSCEEECCCCHHHHC-----CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSS
T ss_pred             eeEEeccchhhEEEcCCCCEEEecCchheeecc--ccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCC
Confidence             99999999999999999999999999875431  111223456888999998      578899999999999999999


Q ss_pred             ccccccCC------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhh
Q 039565          134 LTVDLSFK------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQ  179 (188)
Q Consensus       134 ~p~~~~~~------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~  179 (188)
                      .||.....            ...+...+..+.+++..||+.+|++|||++++++.+..
T Consensus       214 ~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~  271 (279)
T 2w5a_A          214 PPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI  271 (279)
T ss_dssp             CSSCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             CCCcccCHHHHHHHHhhcccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence            99864321            12333456789999999999999999999999987644

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.98  E-value=3.9e-33  Score=214.89  Aligned_cols=163  Identities=21%  Similarity=0.286  Sum_probs=135.3

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-C--Ccc---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-G--KEE---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~--~~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++   ....+++|||+++++|.+++ .  ...         |++.||.|||+   .+++|+|++|+|
T Consensus        60 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dikp~N  136 (304)
T 2jam_A           60 LKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHE---NGIVHRDLKPEN  136 (304)
T ss_dssp             HHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCSCCGGG
T ss_pred             HHhCCCCCeeehhhhcccCCEEEEEEEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHH
Confidence            567899999999998   77889999999999999988 2  222         99999999999   999999999999


Q ss_pred             EEE---ccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC
Q 039565           71 ILL---NEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK  141 (188)
Q Consensus        71 ill---~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~  141 (188)
                      |++   +.++.++++|||++....    ........|++.|++||      ++.++|+||||+++|++++|..||.....
T Consensus       137 Il~~~~~~~~~~kl~Dfg~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~  212 (304)
T 2jam_A          137 LLYLTPEENSKIMITDFGLSKMEQ----NGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE  212 (304)
T ss_dssp             CEESSSSTTCCEEBCSCSTTCCCC----CBTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH
T ss_pred             EEEecCCCCCCEEEccCCcceecC----CCccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH
Confidence            999   678899999999986432    11223456888999999      57789999999999999999999854321


Q ss_pred             ---------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 ---------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 ---------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                     .......+..+.+++..||+.+|++|||++++++
T Consensus       213 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (304)
T 2jam_A          213 SKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALS  261 (304)
T ss_dssp             HHHHHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence                           1122234578999999999999999999999987

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.98  E-value=1.7e-33  Score=219.41  Aligned_cols=164  Identities=16%  Similarity=0.194  Sum_probs=127.3

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++   ....++||||++ ++|.+++ ....           |++.||.|||+   .+++||||||+|
T Consensus        87 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~---~~ivH~Dlkp~N  162 (329)
T 3gbz_A           87 LKELQHRNIIELKSVIHHNHRLHLIFEYAE-NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHS---RRCLHRDLKPQN  162 (329)
T ss_dssp             GGGCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGG
T ss_pred             HHHcCCCCcceEEEEEecCCEEEEEEecCC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh---CCEECCCCCHHH
Confidence            577899999999999   788999999998 5999998 2222           99999999999   999999999999


Q ss_pred             EEEc-----cCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccc
Q 039565           71 ILLN-----EKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        71 ill~-----~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      |+++     ..+.+||+|||++......  ........++..|+|||       ++.++||||||+++|+|++|..||..
T Consensus       163 Ill~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  240 (329)
T 3gbz_A          163 LLLSVSDASETPVLKIGDFGLARAFGIP--IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPG  240 (329)
T ss_dssp             EEEEC-----CCEEEECCTTHHHHHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             EEEecCCCCccceEEECcCCCccccCCc--ccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCC
Confidence            9994     4456999999998754311  12233456788899998       57889999999999999999998853


Q ss_pred             cCCCC-----------------------------------------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          139 SFKGE-----------------------------------------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       139 ~~~~~-----------------------------------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ....+                                         .....+..+.+++..||+.||++|||++++++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  318 (329)
T 3gbz_A          241 DSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE  318 (329)
T ss_dssp             SSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence            22100                                         00013467889999999999999999999986

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.98  E-value=8.4e-34  Score=221.19  Aligned_cols=165  Identities=22%  Similarity=0.247  Sum_probs=130.7

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++   ....++||||+++++|..+. ....           |++.||.|||+   .+++|+||||+|
T Consensus        78 l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~N  154 (331)
T 4aaa_A           78 LKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHS---HNIIHRDIKPEN  154 (331)
T ss_dssp             HHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGG
T ss_pred             HhhCCCCCEeeEEEEeecCCEEEEEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHH---CCEEccCcChhe
Confidence            567899999999999   77889999999999998886 2222           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCCCC
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFKGE  143 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~~  143 (188)
                      |+++.++.++|+|||++......  ........++..|++||       ++.++|+||||+++|+|++|..||......+
T Consensus       155 il~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~  232 (331)
T 4aaa_A          155 ILVSQSGVVKLCDFGFARTLAAP--GEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID  232 (331)
T ss_dssp             EEECTTSCEEECCCTTC--------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             EEEcCCCcEEEEeCCCceeecCC--ccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH
Confidence            99999999999999998754321  12233456788899998       4778999999999999999999885432100


Q ss_pred             -------------------------------------c-----CHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          144 -------------------------------------F-----DIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       144 -------------------------------------~-----~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                                           .     ....+..+.+++..||+.||.+|||++++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  306 (331)
T 4aaa_A          233 QLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH  306 (331)
T ss_dssp             HHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             HHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence                                                 0     0123567899999999999999999999886

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.98  E-value=7e-33  Score=213.21  Aligned_cols=166  Identities=17%  Similarity=0.209  Sum_probs=133.0

Q ss_pred             cccccCCCeeeeccc-----CCccEEEEecCCCCChhhhc-C--Ccc-----------cHHHHHHHHhcCCCCCcEEeCC
Q 039565            6 RNKLTGPLLVELIGK-----QKNNALELGFRGNPELVDQQ-G--KEE-----------VCCPGLEYLHQGLKHPIIQRDM   66 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-----~~~~~lv~e~~~~~~L~~~~-~--~~~-----------~i~~~l~~Lh~~~~~~i~h~dl   66 (188)
                      +.+++||||++++++     ....+++|||++++ |.+++ .  ...           |++.||.|||+   .+++|+||
T Consensus        60 l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dl  135 (305)
T 2wtk_C           60 LRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHS---QGIVHKDI  135 (305)
T ss_dssp             HTTCCCTTBCCEEEEEECC---CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCC
T ss_pred             HHhcCCCCeeEEEEEEEcCCCCeEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHH---CCeeecCC
Confidence            567899999999997     45789999999975 66666 1  111           99999999999   99999999


Q ss_pred             CCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCCC--------CCccchHHHHHHHHHHHhCCccccc
Q 039565           67 KSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTEL--------TEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        67 ~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~--------~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      ||+||+++.++.++++|||.+................|+..|++||.        +.++|+||||+++|++++|..||+.
T Consensus       136 kp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~  215 (305)
T 2wtk_C          136 KPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG  215 (305)
T ss_dssp             SGGGEEECTTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CcccEEEcCCCcEEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCC
Confidence            99999999999999999999876432222233345668899999981        4579999999999999999999864


Q ss_pred             cCC-----------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          139 SFK-----------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       139 ~~~-----------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ...           ...+...+..+.+++..||+.||.+|||++++++
T Consensus       216 ~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  263 (305)
T 2wtk_C          216 DNIYKLFENIGKGSYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQ  263 (305)
T ss_dssp             SSHHHHHHHHHHCCCCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             chHHHHHHHHhcCCCCCCCccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            321           1122234567889999999999999999999997

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.98  E-value=2.5e-33  Score=236.91  Aligned_cols=161  Identities=19%  Similarity=0.273  Sum_probs=136.1

Q ss_pred             cCCCeeeeccc---CCccEEEEecCCCCChhhhcCC---cc---------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEc
Q 039565           10 TGPLLVELIGK---QKNNALELGFRGNPELVDQQGK---EE---------VCCPGLEYLHQGLKHPIIQRDMKSTNILLN   74 (188)
Q Consensus        10 ~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~---~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~   74 (188)
                      +||||++++++   .+..++||||+++|+|..++.+   ..         |++.||+|||+   .+|+||||||+|||++
T Consensus       400 ~~~~i~~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~---~gIiHrDLKp~NILl~  476 (674)
T 3pfq_A          400 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLD  476 (674)
T ss_dssp             CCTTBCCEEEECBCSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TSEECCCCCSTTEEEC
T ss_pred             CCCeEEEEEEEEEeCCEEEEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeccCChhhEEEc
Confidence            79999999988   6788999999999999999922   22         99999999999   9999999999999999


Q ss_pred             cCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC-------
Q 039565           75 EKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK-------  141 (188)
Q Consensus        75 ~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~-------  141 (188)
                      .++.+||+|||+++....  .........||+.|+|||      ++.++|+||||+++|+|++|..||.....       
T Consensus       477 ~~g~ikL~DFGla~~~~~--~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i  554 (674)
T 3pfq_A          477 SEGHIKIADFGMCKENIW--DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI  554 (674)
T ss_dssp             SSSCEEECCCTTCEECCC--TTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             CCCcEEEeecceeecccc--CCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHH
Confidence            999999999999875321  122345578999999999      68899999999999999999999965321       


Q ss_pred             ----CCcCHHHHHHHHHHHHHccCcCCCCCCCH-----HHHHH
Q 039565          142 ----GEFDIISVEKAVEIAMASVSSKVNRRPLM-----NQVVM  175 (188)
Q Consensus       142 ----~~~~~~~~~~~~~l~~~cl~~~p~~Rps~-----~~i~~  175 (188)
                          ..++...+..+.+++..||+.||++||++     ++|++
T Consensus       555 ~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~  597 (674)
T 3pfq_A          555 MEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE  597 (674)
T ss_dssp             HSSCCCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred             HhCCCCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence                22444566789999999999999999997     66654

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.98  E-value=4.5e-33  Score=220.45  Aligned_cols=163  Identities=19%  Similarity=0.241  Sum_probs=125.2

Q ss_pred             cccccCCCeeeeccc---C------CccEEEEecCCCCChhhhc-CCcc---------cHHHHHHHHhcCCCCCcEEeCC
Q 039565            6 RNKLTGPLLVELIGK---Q------KNNALELGFRGNPELVDQQ-GKEE---------VCCPGLEYLHQGLKHPIIQRDM   66 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~------~~~~lv~e~~~~~~L~~~~-~~~~---------~i~~~l~~Lh~~~~~~i~h~dl   66 (188)
                      +++++||||++++++   .      ...++||||+++ +|.+++ ....         |++.||.|||+   .+++||||
T Consensus        78 l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dl  153 (371)
T 2xrw_A           78 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDL  153 (371)
T ss_dssp             HHHCCCTTBCCEEEEECSCCSTTTCCEEEEEEECCSE-EHHHHHHSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCC
T ss_pred             HHhcCCCCccceEEeeccccccccccceEEEEEcCCC-CHHHHHhhccCHHHHHHHHHHHHHHHHHHHH---CCeecccC
Confidence            467899999999998   2      267999999984 788877 3333         99999999999   99999999


Q ss_pred             CCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           67 KSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        67 ~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      ||+||+++.++.+||+|||+++...   .........|+..|+|||      ++.++|+||||+++|+|++|..||....
T Consensus       154 kp~NIl~~~~~~~kl~Dfg~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  230 (371)
T 2xrw_A          154 KPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD  230 (371)
T ss_dssp             CGGGEEECTTSCEEECCCCC-------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             CHHHEEEcCCCCEEEEEeecccccc---cccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence            9999999999999999999987542   112233467888999998      6889999999999999999999985421


Q ss_pred             CC-----------------------------------------------------CcCHHHHHHHHHHHHHccCcCCCCC
Q 039565          141 KG-----------------------------------------------------EFDIISVEKAVEIAMASVSSKVNRR  167 (188)
Q Consensus       141 ~~-----------------------------------------------------~~~~~~~~~~~~l~~~cl~~~p~~R  167 (188)
                      ..                                                     +.....+..+.+++..||+.||++|
T Consensus       231 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R  310 (371)
T 2xrw_A          231 HIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKR  310 (371)
T ss_dssp             HHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGS
T ss_pred             HHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhC
Confidence            10                                                     0011235678999999999999999


Q ss_pred             CCHHHHHH
Q 039565          168 PLMNQVVM  175 (188)
Q Consensus       168 ps~~~i~~  175 (188)
                      ||++++++
T Consensus       311 ~t~~e~l~  318 (371)
T 2xrw_A          311 ISVDEALQ  318 (371)
T ss_dssp             CCHHHHHH
T ss_pred             CCHHHHhC
Confidence            99999987

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.98  E-value=1.1e-32  Score=218.18  Aligned_cols=166  Identities=22%  Similarity=0.225  Sum_probs=134.4

Q ss_pred             cccccCCCeeeeccc---C------CccEEEEecCCCCChhhhc--CCcc---------cHHHHHHHHhcCCCCCcEEeC
Q 039565            6 RNKLTGPLLVELIGK---Q------KNNALELGFRGNPELVDQQ--GKEE---------VCCPGLEYLHQGLKHPIIQRD   65 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~------~~~~lv~e~~~~~~L~~~~--~~~~---------~i~~~l~~Lh~~~~~~i~h~d   65 (188)
                      +.+++||||++++++   .      ...++||||+ +++|.+++  ....         |++.||.|||+   .+++|||
T Consensus        78 l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~---~~ivH~D  153 (367)
T 1cm8_A           78 LKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHA---AGIIHRD  153 (367)
T ss_dssp             HHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCC
T ss_pred             HHhCCCcCCCCceeeEecCCccccCceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccC
Confidence            567899999999998   2      3459999999 67999998  2222         99999999999   9999999


Q ss_pred             CCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccc
Q 039565           66 MKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        66 l~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      |||+||+++.++.+||+|||+++....     ......++..|+|||       ++.++|+||+||++|+|++|..||..
T Consensus       154 lkp~NIll~~~~~~kl~Dfg~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  228 (367)
T 1cm8_A          154 LKPGNLAVNEDCELKILDFGLARQADS-----EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKG  228 (367)
T ss_dssp             CCGGGEEECTTCCEEECCCTTCEECCS-----SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cCHHHEEEcCCCCEEEEeeeccccccc-----ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCC
Confidence            999999999999999999999875431     123456788999998       57899999999999999999999864


Q ss_pred             cCCCC------------------------------------------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH-
Q 039565          139 SFKGE------------------------------------------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVM-  175 (188)
Q Consensus       139 ~~~~~------------------------------------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~-  175 (188)
                      ....+                                          .....+..+.+++..||+.||.+|||++++++ 
T Consensus       229 ~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h  308 (367)
T 1cm8_A          229 SDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH  308 (367)
T ss_dssp             SSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             CCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence            32100                                          00122456889999999999999999999988 


Q ss_pred             -HHhhc
Q 039565          176 -VREQG  180 (188)
Q Consensus       176 -~l~~~  180 (188)
                       .+++.
T Consensus       309 p~f~~~  314 (367)
T 1cm8_A          309 PYFESL  314 (367)
T ss_dssp             GGGTTT
T ss_pred             hHHHhh
Confidence             34443

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.98  E-value=3.1e-33  Score=213.08  Aligned_cols=170  Identities=24%  Similarity=0.265  Sum_probs=135.6

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC---cc---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK---EE---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~---~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +.+++||||++++++   ....+++|||+++++|.+++..   ..         |++.||.|||+   .+++|+|++|+|
T Consensus        62 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~N  138 (283)
T 3bhy_A           62 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPEN  138 (283)
T ss_dssp             HHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGG
T ss_pred             HHhCCCCCeeehhheecCCCeEEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChHH
Confidence            567889999999998   7788999999999999999822   22         99999999999   999999999999


Q ss_pred             EEEccCC----ceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           71 ILLNEKV----QAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        71 ill~~~~----~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      |+++.++    .++|+|||.+.....   ........+++.|++||      ++.++|+||||+++|++++|..||....
T Consensus       139 il~~~~~~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  215 (283)
T 3bhy_A          139 IMLLDKNVPNPRIKLIDFGIAHKIEA---GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGET  215 (283)
T ss_dssp             EEESCSSSSSCCEEECCCTTCEECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred             EEEecCCCCCCceEEEecccceeccC---CCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcc
Confidence            9998876    799999999875431   11223456888899998      5789999999999999999999986432


Q ss_pred             CC-----------CcCH----HHHHHHHHHHHHccCcCCCCCCCHHHHHH--HHhhcc
Q 039565          141 KG-----------EFDI----ISVEKAVEIAMASVSSKVNRRPLMNQVVM--VREQGS  181 (188)
Q Consensus       141 ~~-----------~~~~----~~~~~~~~l~~~cl~~~p~~Rps~~~i~~--~l~~~~  181 (188)
                      ..           ..+.    ..+..+.+++..||+.+|++|||++++++  .++...
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  273 (283)
T 3bhy_A          216 KQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR  273 (283)
T ss_dssp             HHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred             hHHHHHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence            11           1111    23457899999999999999999999997  455443

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.98  E-value=8.9e-33  Score=215.23  Aligned_cols=160  Identities=24%  Similarity=0.266  Sum_probs=130.3

Q ss_pred             cCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc--c------------cHHHHHHHHhcCCCCCcEEeCCCCCcEE
Q 039565           10 TGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE--E------------VCCPGLEYLHQGLKHPIIQRDMKSTNIL   72 (188)
Q Consensus        10 ~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~--~------------~i~~~l~~Lh~~~~~~i~h~dl~~~nil   72 (188)
                      +||||++++++   ....++||||+++|+|.+++...  .            |++.||+|||+   .+++||||||+||+
T Consensus        87 ~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~---~givH~Dikp~NIl  163 (327)
T 3lm5_A           87 SCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQ---NNIVHLDLKPQNIL  163 (327)
T ss_dssp             TCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEE
T ss_pred             CCCCEEEEEEEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCChHHEE
Confidence            57999999999   77889999999999999998221  1            99999999999   99999999999999


Q ss_pred             Ecc---CCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC--
Q 039565           73 LNE---KVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK--  141 (188)
Q Consensus        73 l~~---~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~--  141 (188)
                      ++.   ++.+||+|||++....   .........|++.|++||      ++.++|+||||+++|+|++|..||.....  
T Consensus       164 ~~~~~~~~~~kL~Dfg~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~  240 (327)
T 3lm5_A          164 LSSIYPLGDIKIVDFGMSRKIG---HACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE  240 (327)
T ss_dssp             ESCBTTBCCEEECCGGGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             EecCCCCCcEEEeeCccccccC---CccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH
Confidence            987   7899999999987543   111233457889999998      57899999999999999999999854221  


Q ss_pred             -------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 -------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 -------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                   .+.....+..+.+++..||+.+|.+|||++++++
T Consensus       241 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~  287 (327)
T 3lm5_A          241 TYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS  287 (327)
T ss_dssp             HHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             HHHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence                         1122234567899999999999999999999986

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.98  E-value=2.3e-33  Score=222.05  Aligned_cols=145  Identities=11%  Similarity=0.003  Sum_probs=119.4

Q ss_pred             CccEEEEecCCCCChhhhcCCc-------------------ccHHHHHHHHhcCCCCCcEEeCCCCCcEEEccCCceEEe
Q 039565           22 KNNALELGFRGNPELVDQQGKE-------------------EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLA   82 (188)
Q Consensus        22 ~~~~lv~e~~~~~~L~~~~~~~-------------------~~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~~~kl~   82 (188)
                      .+.++||||++ ++|.+++...                   .|++.||+|||+   .+|+||||||+||+++.++.+||+
T Consensus       161 ~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~---~~ivHrDikp~NIll~~~~~~kL~  236 (371)
T 3q60_A          161 ANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQS---KGLVHGHFTPDNLFIMPDGRLMLG  236 (371)
T ss_dssp             EEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHH---TTEEETTCSGGGEEECTTSCEEEC
T ss_pred             eeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHH---CCCccCcCCHHHEEECCCCCEEEE
Confidence            34799999999 8999998321                   189999999999   999999999999999999999999


Q ss_pred             cccCcccccCCCCCcceeeecccccccCCC--------CCCccchHHHHHHHHHHHhCCccccccCCC------------
Q 039565           83 DFGQSRISPVEGGTHMSTTIAGTAGFLNTE--------LTEKSDVDSFEIVILEIITGILTVDLSFKG------------  142 (188)
Q Consensus        83 d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe--------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~------------  142 (188)
                      |||+++...   .  ......+++.|+|||        ++.++|+||||+++|+|++|..||......            
T Consensus       237 DFG~a~~~~---~--~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~  311 (371)
T 3q60_A          237 DVSALWKVG---T--RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRV  311 (371)
T ss_dssp             CGGGEEETT---C--EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTS
T ss_pred             ecceeeecC---C--CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhh
Confidence            999987542   1  122445668899998        577899999999999999999999655211            


Q ss_pred             --------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          143 --------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       143 --------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                              ......+..+.+++..||+.||++|||++++++
T Consensus       312 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          312 PGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME  352 (371)
T ss_dssp             CCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred             ccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                    011244678999999999999999999999875

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.98  E-value=2.2e-33  Score=213.75  Aligned_cols=157  Identities=17%  Similarity=0.250  Sum_probs=127.7

Q ss_pred             cCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc-------c---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565           10 TGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE-------E---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus        10 ~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~-------~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +||||++++++   .+..++||||+++++|.+++...       .         |++.||.|||+   .+++|+||||+|
T Consensus        69 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~N  145 (289)
T 1x8b_A           69 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSN  145 (289)
T ss_dssp             SCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGG
T ss_pred             CCCCeeeeeeeeecCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeecCCCHHH
Confidence            89999999999   78899999999999999999221       1         99999999999   999999999999


Q ss_pred             EEEccC-------------------CceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHH
Q 039565           71 ILLNEK-------------------VQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEI  124 (188)
Q Consensus        71 ill~~~-------------------~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~  124 (188)
                      |+++.+                   ..++++|||.+.....      .....|+..|++||       ++.++||||||+
T Consensus       146 Il~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~  219 (289)
T 1x8b_A          146 IFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISS------PQVEEGDSRFLANEVLQENYTHLPKADIFALAL  219 (289)
T ss_dssp             EEEC--------------------CCCEEECCCTTCEETTC------SCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHH
T ss_pred             EEEcCCCCCcccccccccccccCCceEEEEcccccccccCC------ccccCCCccccChhHhcCCCCCCchhhHHHHHH
Confidence            999844                   4789999999875431      12235888899998       235899999999


Q ss_pred             HHHHHHhCCcccccc---------CCCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          125 VILEIITGILTVDLS---------FKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       125 ~l~~~~~g~~p~~~~---------~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ++|++++|..++...         .....+...+..+.+++..||+.+|++|||++++++
T Consensus       220 il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  279 (289)
T 1x8b_A          220 TVVCAAGAEPLPRNGDQWHEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK  279 (289)
T ss_dssp             HHHHHTTCCCCCSSSHHHHHHHTTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHhcCCCCCcchhHHHHHHcCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence            999999998654321         112233345678999999999999999999999986

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.98  E-value=2.2e-32  Score=215.89  Aligned_cols=166  Identities=18%  Similarity=0.221  Sum_probs=133.7

Q ss_pred             cccccCCCeeeeccc---C-----CccEEEEecCCCCChhhhc--CCcc---------cHHHHHHHHhcCCCCCcEEeCC
Q 039565            6 RNKLTGPLLVELIGK---Q-----KNNALELGFRGNPELVDQQ--GKEE---------VCCPGLEYLHQGLKHPIIQRDM   66 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~-----~~~~lv~e~~~~~~L~~~~--~~~~---------~i~~~l~~Lh~~~~~~i~h~dl   66 (188)
                      +.+++||||++++++   .     ...++++||+. ++|.+++  ....         |++.||.|||+   .+++||||
T Consensus        79 l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~~~-~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Di  154 (364)
T 3qyz_A           79 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDL  154 (364)
T ss_dssp             HHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCC
T ss_pred             HHhcCCCCCccceeEEecCCccccceEEEEEcccC-cCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCC
Confidence            567899999999998   1     46799999998 5899988  2222         99999999999   99999999


Q ss_pred             CCCcEEEccCCceEEecccCcccccCCCC-CcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccc
Q 039565           67 KSTNILLNEKVQAKLADFGQSRISPVEGG-THMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        67 ~~~nill~~~~~~kl~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      ||+||+++.++.+||+|||++........ ........|++.|++||       ++.++|+||||+++|+|++|..||..
T Consensus       155 kp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  234 (364)
T 3qyz_A          155 KPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG  234 (364)
T ss_dssp             CGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ChHhEEECCCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCC
Confidence            99999999999999999999875432111 11123457889999998       58889999999999999999999864


Q ss_pred             cCCCCc------------------------------------------CHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          139 SFKGEF------------------------------------------DIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       139 ~~~~~~------------------------------------------~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ....+.                                          ....+..+.+++..||+.||++|||++++++
T Consensus       235 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  313 (364)
T 3qyz_A          235 KHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA  313 (364)
T ss_dssp             SSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            321110                                          0112457889999999999999999999987

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.97  E-value=1.9e-33  Score=222.93  Aligned_cols=162  Identities=12%  Similarity=0.015  Sum_probs=128.3

Q ss_pred             CCcccccCCCeeeec-------cc---CC-----------------ccEEEEecCCCCChhhhcCC-----c-------c
Q 039565            4 PNRNKLTGPLLVELI-------GK---QK-----------------NNALELGFRGNPELVDQQGK-----E-------E   44 (188)
Q Consensus         4 ~~l~~l~Hpniv~~~-------~~---~~-----------------~~~lv~e~~~~~~L~~~~~~-----~-------~   44 (188)
                      ..+++++||||++++       ++   .+                 ..+++|||+ +|+|.+++..     .       .
T Consensus       128 ~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~  206 (377)
T 3byv_A          128 RLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHH  206 (377)
T ss_dssp             GGSTTCCSHHHHHHHHCBCCCSEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHH
T ss_pred             HhccccCCHHHHHHHhhhhhhhhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHH
Confidence            356778999999998       33   11                 378999999 5799999821     1       1


Q ss_pred             -------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-----
Q 039565           45 -------VCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-----  112 (188)
Q Consensus        45 -------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-----  112 (188)
                             |++.||+|||+   .+|+||||||+||+++.++.+||+|||+++...     .......| ..|+|||     
T Consensus       207 ~~~~i~~qi~~aL~~LH~---~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~-----~~~~~~~g-~~y~aPE~~~~~  277 (377)
T 3byv_A          207 ARLQLTLQVIRLLASLHH---YGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDG-----ARVVSSVS-RGFEPPELEARR  277 (377)
T ss_dssp             HHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCGGGCEETT-----CEEECCCC-TTCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEechhheecC-----CcccCCCC-cCccChhhhccc
Confidence                   99999999999   999999999999999999999999999987422     12334566 8899987     


Q ss_pred             ------------CCCccchHHHHHHHHHHHhCCccccccCCCC-------cCHHHHHHHHHHHHHccCcCCCCCCCHHHH
Q 039565          113 ------------LTEKSDVDSFEIVILEIITGILTVDLSFKGE-------FDIISVEKAVEIAMASVSSKVNRRPLMNQV  173 (188)
Q Consensus       113 ------------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~~-------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i  173 (188)
                                  ++.++|+||||+++|+|++|..||.......       .....+..+.+++..||+.||++|||+.++
T Consensus       278 ~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~  357 (377)
T 3byv_A          278 ATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQA  357 (377)
T ss_dssp             TSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSGGGGSSCCCCCHHHHHHHHHHTCSSGGGCCCHHHH
T ss_pred             ccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchhhhhhhccCCCHHHHHHHHHHcCCCchhCCCHHHH
Confidence                        3568999999999999999999996533211       112345789999999999999999999999


Q ss_pred             HH
Q 039565          174 VM  175 (188)
Q Consensus       174 ~~  175 (188)
                      ++
T Consensus       358 l~  359 (377)
T 3byv_A          358 ME  359 (377)
T ss_dssp             HT
T ss_pred             hh
Confidence            86

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.97  E-value=1.1e-32  Score=216.35  Aligned_cols=166  Identities=20%  Similarity=0.196  Sum_probs=130.7

Q ss_pred             cccccCCCeeeeccc-----------CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCc
Q 039565            6 RNKLTGPLLVELIGK-----------QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPI   61 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-----------~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i   61 (188)
                      +.+++||||++++++           ....++||||+++ +|.+.+ ....            |++.||.|||+   .++
T Consensus        70 l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i  145 (351)
T 3mi9_A           70 LQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR---NKI  145 (351)
T ss_dssp             HHHCCCTTBCCEEEEEEEC--------CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHH---TTE
T ss_pred             HHhccCCCcccHhheeeccccccccCCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCe
Confidence            467899999999998           1357899999995 777776 3221            99999999999   999


Q ss_pred             EEeCCCCCcEEEccCCceEEecccCcccccCCCC--CcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhC
Q 039565           62 IQRDMKSTNILLNEKVQAKLADFGQSRISPVEGG--THMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITG  132 (188)
Q Consensus        62 ~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g  132 (188)
                      +||||||+||+++.++.+||+|||+++.......  ........|++.|+|||       ++.++|+||||+++|+|++|
T Consensus       146 vH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g  225 (351)
T 3mi9_A          146 LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR  225 (351)
T ss_dssp             ECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHS
T ss_pred             eCCCCCHHHEEEcCCCCEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhC
Confidence            9999999999999999999999999876432211  12223456788999998       57899999999999999999


Q ss_pred             CccccccCCC---------------C-cCH---------------------------HHHHHHHHHHHHccCcCCCCCCC
Q 039565          133 ILTVDLSFKG---------------E-FDI---------------------------ISVEKAVEIAMASVSSKVNRRPL  169 (188)
Q Consensus       133 ~~p~~~~~~~---------------~-~~~---------------------------~~~~~~~~l~~~cl~~~p~~Rps  169 (188)
                      ..||......               + .+.                           .....+.+++..||+.||++|||
T Consensus       226 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t  305 (351)
T 3mi9_A          226 SPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRID  305 (351)
T ss_dssp             SCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCC
T ss_pred             CCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCC
Confidence            9988542210               0 000                           01345889999999999999999


Q ss_pred             HHHHHH
Q 039565          170 MNQVVM  175 (188)
Q Consensus       170 ~~~i~~  175 (188)
                      ++++++
T Consensus       306 ~~e~l~  311 (351)
T 3mi9_A          306 SDDALN  311 (351)
T ss_dssp             HHHHHT
T ss_pred             HHHHhC
Confidence            999987

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.97  E-value=8.4e-33  Score=220.62  Aligned_cols=170  Identities=19%  Similarity=0.174  Sum_probs=131.4

Q ss_pred             cccccCCCeeeeccc---CC------ccEEEEecCCCCChhhhc---C-Ccc-----------cHHHHHHHHhcCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QK------NNALELGFRGNPELVDQQ---G-KEE-----------VCCPGLEYLHQGLKHPI   61 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~------~~~lv~e~~~~~~L~~~~---~-~~~-----------~i~~~l~~Lh~~~~~~i   61 (188)
                      +.+++||||++++++   ..      ..++||||++++.+....   . ...           |++.||.|||+   .+|
T Consensus        86 l~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~i  162 (394)
T 4e7w_A           86 MRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS---IGI  162 (394)
T ss_dssp             HHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTE
T ss_pred             HHhCCCCCcceEEEEEEecCCCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH---CCc
Confidence            567899999999988   21      278999999964333322   1 111           99999999999   999


Q ss_pred             EEeCCCCCcEEEc-cCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCC
Q 039565           62 IQRDMKSTNILLN-EKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGI  133 (188)
Q Consensus        62 ~h~dl~~~nill~-~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~  133 (188)
                      +||||||+||+++ .++.+||+|||+++.....   .......++..|+|||       ++.++|+|||||++|+|++|.
T Consensus       163 vHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~  239 (394)
T 4e7w_A          163 CHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG---EPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ  239 (394)
T ss_dssp             ECSCCSGGGEEEETTTTEEEECCCTTCEECCTT---CCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSS
T ss_pred             cCCCCCHHHEEEcCCCCcEEEeeCCCcccccCC---CCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence            9999999999999 7899999999999764311   1233456788899998       578899999999999999999


Q ss_pred             ccccccCCCC----------------------------------------cCHHHHHHHHHHHHHccCcCCCCCCCHHHH
Q 039565          134 LTVDLSFKGE----------------------------------------FDIISVEKAVEIAMASVSSKVNRRPLMNQV  173 (188)
Q Consensus       134 ~p~~~~~~~~----------------------------------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i  173 (188)
                      .||......+                                        ++...+..+.+++..||+.+|.+|||+.++
T Consensus       240 ~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~  319 (394)
T 4e7w_A          240 PLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEA  319 (394)
T ss_dssp             CSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHH
Confidence            9986432100                                        111234578999999999999999999999


Q ss_pred             HHH--Hhhcc
Q 039565          174 VMV--REQGS  181 (188)
Q Consensus       174 ~~~--l~~~~  181 (188)
                      ++.  ++++.
T Consensus       320 l~hp~f~~~~  329 (394)
T 4e7w_A          320 LCHPFFDELR  329 (394)
T ss_dssp             HTSGGGSTTT
T ss_pred             hcChhhhhhc
Confidence            873  54443

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.97  E-value=1.3e-32  Score=211.14  Aligned_cols=164  Identities=19%  Similarity=0.203  Sum_probs=134.6

Q ss_pred             cccc-cCCCeeeeccc---CCccEEEEecCCCCChhhhcCC---cc---------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKL-TGPLLVELIGK---QKNNALELGFRGNPELVDQQGK---EE---------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l-~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~---~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.++ +||||++++++   ....++||||+++++|.+++..   ..         |++.||.|||+   .+++|+||+|+
T Consensus        77 l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~  153 (298)
T 1phk_A           77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPE  153 (298)
T ss_dssp             HHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGG
T ss_pred             HHHhcCCCCEeeeeeeeccCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcc
Confidence            3455 49999999999   7788999999999999999822   22         99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------------CCCccchHHHHHHHHHHHhCCcccc
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------------LTEKSDVDSFEIVILEIITGILTVD  137 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------------~~~~~di~s~G~~l~~~~~g~~p~~  137 (188)
                      ||+++.++.++|+|||.+.....   ........++..|++||            ++.++|+||||+++|++++|..||.
T Consensus       154 Nil~~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~  230 (298)
T 1phk_A          154 NILLDDDMNIKLTDFGFSCQLDP---GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFW  230 (298)
T ss_dssp             GEEECTTCCEEECCCTTCEECCT---TCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             eEEEcCCCcEEEecccchhhcCC---CcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCc
Confidence            99999999999999999875431   11233456788899988            4678999999999999999999885


Q ss_pred             ccCC---------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          138 LSFK---------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       138 ~~~~---------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ....               .......+..+.+++..||+.+|.+|||++++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          231 HRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             CSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             CccHHHHHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence            3221               1111234667999999999999999999999986

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.97  E-value=2.2e-32  Score=220.68  Aligned_cols=162  Identities=22%  Similarity=0.291  Sum_probs=126.4

Q ss_pred             cCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc------------------cHHHHHHHHhcCCCCCcEEeCCC
Q 039565           10 TGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE------------------VCCPGLEYLHQGLKHPIIQRDMK   67 (188)
Q Consensus        10 ~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~------------------~i~~~l~~Lh~~~~~~i~h~dl~   67 (188)
                      +||||+++++.   ....+++|||+. |+|.+++ ....                  |++.||.|||+   .+|+|||||
T Consensus        67 ~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDLk  142 (434)
T 2rio_A           67 DHPNVIRYYCSETTDRFLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLK  142 (434)
T ss_dssp             TSTTBCCEEEEEECSSEEEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHH---TTEECCCCS
T ss_pred             CCCCcCeEEEEEecCCeEEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHH---CCccccCCC
Confidence            89999999998   678899999997 6999998 2210                  89999999999   999999999


Q ss_pred             CCcEEEccC-------------CceEEecccCcccccCCCCCc--ceeeecccccccCCC-------------CCCccch
Q 039565           68 STNILLNEK-------------VQAKLADFGQSRISPVEGGTH--MSTTIAGTAGFLNTE-------------LTEKSDV  119 (188)
Q Consensus        68 ~~nill~~~-------------~~~kl~d~~~~~~~~~~~~~~--~~~~~~~~~~~~~pe-------------~~~~~di  119 (188)
                      |+||+++.+             +.+||+|||+++.........  ......|++.|+|||             ++.++||
T Consensus       143 p~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~Di  222 (434)
T 2rio_A          143 PQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDI  222 (434)
T ss_dssp             GGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHH
T ss_pred             hHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhh
Confidence            999999754             479999999998653221111  123457899999998             3667999


Q ss_pred             HHHHHHHHHHHh-CCccccccCC----------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          120 DSFEIVILEIIT-GILTVDLSFK----------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       120 ~s~G~~l~~~~~-g~~p~~~~~~----------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      |||||++|+|++ |..||+....                ...+...+..+.+++.+||+.+|.+|||+.++++
T Consensus       223 wSlG~il~ellt~g~~Pf~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          223 FSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             HHHHHHHHHHHTTSCCTTCSTTTHHHHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HhHHHHHHHHHhCCCCCCCCchhhHHHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence            999999999998 8899864321                1123456788999999999999999999999985

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.97  E-value=1.9e-32  Score=214.42  Aligned_cols=164  Identities=18%  Similarity=0.258  Sum_probs=135.5

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhh------cCC--cc------------cHHHHHHHHhcCCCCCcE
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQ------QGK--EE------------VCCPGLEYLHQGLKHPII   62 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~------~~~--~~------------~i~~~l~~Lh~~~~~~i~   62 (188)
                      +.+++||||++++++   .+..++||||+++++|.++      +..  ..            |++.||.|||+  ..+++
T Consensus        97 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~--~~~i~  174 (348)
T 2pml_X           97 ITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN--EKNIC  174 (348)
T ss_dssp             HTTCCCTTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHH--TSCEE
T ss_pred             HHhCCCCCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhc--cCCEe
Confidence            567899999999999   7889999999999999998      632  11            99999999996  27999


Q ss_pred             EeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCCC-------CC-ccchHHHHHHHHHHHhCCc
Q 039565           63 QRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTEL-------TE-KSDVDSFEIVILEIITGIL  134 (188)
Q Consensus        63 h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~-------~~-~~di~s~G~~l~~~~~g~~  134 (188)
                      |+|++|+||+++.++.++|+|||.+......    ......++..|++||.       +. ++|+||||+++|++++|..
T Consensus       175 H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~  250 (348)
T 2pml_X          175 HRDVKPSNILMDKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVV  250 (348)
T ss_dssp             CCCCCGGGEEECTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSC
T ss_pred             ecCCChHhEEEcCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCC
Confidence            9999999999999999999999998754311    3344578889999992       13 8999999999999999999


Q ss_pred             cccccCC------------CCcC-------------------HHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          135 TVDLSFK------------GEFD-------------------IISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       135 p~~~~~~------------~~~~-------------------~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ||.....            ...+                   ...+..+.+++..||+.+|.+|||++++++
T Consensus       251 pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~  322 (348)
T 2pml_X          251 PFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK  322 (348)
T ss_dssp             SSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             CCCCCCcHHHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            9864322            1111                   335678899999999999999999999987

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.97  E-value=1.1e-32  Score=217.02  Aligned_cols=163  Identities=18%  Similarity=0.156  Sum_probs=124.7

Q ss_pred             cccccCCCeeeeccc--------CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEe
Q 039565            6 RNKLTGPLLVELIGK--------QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQR   64 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--------~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~   64 (188)
                      +.+++||||++++++        ....++||||++ |+|.+++ ....            |++.||.|||+   .+++|+
T Consensus        83 l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~  158 (362)
T 3pg1_A           83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHE---AGVVHR  158 (362)
T ss_dssp             HHHCCCTTBCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCC
T ss_pred             HHhCCCcCccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CcCEec
Confidence            567899999999988        235799999999 5888887 3321            99999999999   999999


Q ss_pred             CCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCcccc
Q 039565           65 DMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVD  137 (188)
Q Consensus        65 dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~  137 (188)
                      ||||+||+++.++.+||+|||++....   .........++..|++||       ++.++|+||||+++|++++|..||.
T Consensus       159 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~---~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~  235 (362)
T 3pg1_A          159 DLHPGNILLADNNDITICDFNLAREDT---ADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFR  235 (362)
T ss_dssp             CCCGGGEEECTTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             CCChHHEEEcCCCCEEEEecCcccccc---cccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCC
Confidence            999999999999999999999987432   112233456788899988       5778999999999999999999986


Q ss_pred             ccCCCC-------------------------------------------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHH
Q 039565          138 LSFKGE-------------------------------------------FDIISVEKAVEIAMASVSSKVNRRPLMNQVV  174 (188)
Q Consensus       138 ~~~~~~-------------------------------------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~  174 (188)
                      .....+                                           .....+..+.+++..||+.+|++|||+++++
T Consensus       236 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell  315 (362)
T 3pg1_A          236 GSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQAL  315 (362)
T ss_dssp             CSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             CCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHH
Confidence            532100                                           0011245688999999999999999999998


Q ss_pred             H
Q 039565          175 M  175 (188)
Q Consensus       175 ~  175 (188)
                      +
T Consensus       316 ~  316 (362)
T 3pg1_A          316 R  316 (362)
T ss_dssp             T
T ss_pred             c
Confidence            7

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.97  E-value=4.2e-33  Score=222.92  Aligned_cols=166  Identities=19%  Similarity=0.203  Sum_probs=125.4

Q ss_pred             cccccCCCeeeeccc-----CCccEEEEecCCCCChhhhcC--C----------cc---------cHHHHHHHHhcCCCC
Q 039565            6 RNKLTGPLLVELIGK-----QKNNALELGFRGNPELVDQQG--K----------EE---------VCCPGLEYLHQGLKH   59 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-----~~~~~lv~e~~~~~~L~~~~~--~----------~~---------~i~~~l~~Lh~~~~~   59 (188)
                      |.+++||||++++++     ....++||||+. ++|.+++.  .          ..         |++.||.|||+   .
T Consensus        72 l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~  147 (405)
T 3rgf_A           72 LRELKHPNVISLQKVFLSHADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---N  147 (405)
T ss_dssp             HHHCCCTTBCCCCEEEEETTTTEEEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHH---T
T ss_pred             HHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHh---C
Confidence            567899999999988     567899999998 47777662  0          11         99999999999   9


Q ss_pred             CcEEeCCCCCcEEE----ccCCceEEecccCcccccCCCC-CcceeeecccccccCCC-------CCCccchHHHHHHHH
Q 039565           60 PIIQRDMKSTNILL----NEKVQAKLADFGQSRISPVEGG-THMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVIL  127 (188)
Q Consensus        60 ~i~h~dl~~~nill----~~~~~~kl~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~  127 (188)
                      +|+||||||+||++    +.++.+||+|||+++....... ........|++.|+|||       ++.++|||||||++|
T Consensus       148 ~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~  227 (405)
T 3rgf_A          148 WVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFA  227 (405)
T ss_dssp             TCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHH
T ss_pred             CEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHH
Confidence            99999999999999    6778999999999986432111 12233467899999998       567899999999999


Q ss_pred             HHHhCCccccccCCCC-----cCHH-----------------------------------------------------HH
Q 039565          128 EIITGILTVDLSFKGE-----FDII-----------------------------------------------------SV  149 (188)
Q Consensus       128 ~~~~g~~p~~~~~~~~-----~~~~-----------------------------------------------------~~  149 (188)
                      +|++|..||.......     ....                                                     ..
T Consensus       228 ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (405)
T 3rgf_A          228 ELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPD  307 (405)
T ss_dssp             HHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTT
T ss_pred             HHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCC
Confidence            9999999995332110     0000                                                     03


Q ss_pred             HHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          150 EKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       150 ~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ..+.+++..||+.||.+|||++++++
T Consensus       308 ~~~~~Ll~~~L~~dP~~R~ta~e~L~  333 (405)
T 3rgf_A          308 SKAFHLLQKLLTMDPIKRITSEQAMQ  333 (405)
T ss_dssp             SHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHHccCCcccCCCHHHHhc
Confidence            56789999999999999999999987

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.97  E-value=2.5e-32  Score=216.20  Aligned_cols=161  Identities=19%  Similarity=0.228  Sum_probs=128.7

Q ss_pred             cccccCCCeeeeccc---CCc------cEEEEecCCCCChhhhc-CCcc---------cHHHHHHHHhcCCCCCcEEeCC
Q 039565            6 RNKLTGPLLVELIGK---QKN------NALELGFRGNPELVDQQ-GKEE---------VCCPGLEYLHQGLKHPIIQRDM   66 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~------~~lv~e~~~~~~L~~~~-~~~~---------~i~~~l~~Lh~~~~~~i~h~dl   66 (188)
                      +.+++||||++++++   ...      .+++|||+. ++|..++ ....         |++.||.|||+   .+++||||
T Consensus        95 l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Di  170 (371)
T 4exu_A           95 LKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDL  170 (371)
T ss_dssp             HHHCCCTTBCCCSEEECSCSSSTTCCCCEEEEECCC-EEHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCC
T ss_pred             HHhcCCCCchhhhhheeccCCcccceeEEEEEcccc-ccHHHHhhcCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCc
Confidence            467899999999998   333      399999998 6898888 3333         99999999999   99999999


Q ss_pred             CCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCcccccc
Q 039565           67 KSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLS  139 (188)
Q Consensus        67 ~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~  139 (188)
                      ||+||+++.++.+||+|||+++....     ......+++.|+|||       ++.++|+||||+++|+|++|..||...
T Consensus       171 kp~NIll~~~~~~kL~Dfg~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  245 (371)
T 4exu_A          171 KPGNLAVNEDCELKILDFGLARHADA-----EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK  245 (371)
T ss_dssp             CGGGEEECTTCCEEECSTTCC-------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             CHHHeEECCCCCEEEEecCccccccc-----CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC
Confidence            99999999999999999999875321     123456788899988       578899999999999999999999643


Q ss_pred             CCCC------------------------------------------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          140 FKGE------------------------------------------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       140 ~~~~------------------------------------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ...+                                          .....+..+.+++..||+.+|++|||++++++
T Consensus       246 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  323 (371)
T 4exu_A          246 DYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT  323 (371)
T ss_dssp             SHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             ChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence            2100                                          00112567899999999999999999999987

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.97  E-value=3.6e-33  Score=214.54  Aligned_cols=165  Identities=19%  Similarity=0.197  Sum_probs=131.3

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcC--Cc--c---------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQG--KE--E---------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~--~~--~---------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||++++++   .+..++++||+++++|..++.  ..  .         |++.||.|||+   .+++|+||+|+
T Consensus        70 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~  146 (302)
T 2j7t_A           70 LATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS---KRIIHRDLKAG  146 (302)
T ss_dssp             HHHCCCTTBCCEEEEEECC-CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGG
T ss_pred             HhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHH
Confidence            467899999999998   778999999999999999872  11  1         99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-----------CCCccchHHHHHHHHHHHhCCccccc
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-----------LTEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-----------~~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      ||+++.++.++|+|||++.....  .........|+..|++||           ++.++|+||||+++|+|++|..||..
T Consensus       147 Nil~~~~~~~kl~Dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~  224 (302)
T 2j7t_A          147 NVLMTLEGDIRLADFGVSAKNLK--TLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHE  224 (302)
T ss_dssp             GEEECTTSCEEECCCHHHHHHHH--HHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             HEEECCCCCEEEEECCCCccccc--cccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCcc
Confidence            99999999999999998653210  001122346788899887           46789999999999999999998864


Q ss_pred             cCC--------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          139 SFK--------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       139 ~~~--------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ...              ...+...+..+.+++..||+.+|.+|||++++++
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          225 LNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             SCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred             CCHHHHHHHHhccCCcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            221              1123345668899999999999999999999986

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.97  E-value=1.8e-32  Score=215.49  Aligned_cols=169  Identities=17%  Similarity=0.159  Sum_probs=131.0

Q ss_pred             cccccCCCeeeeccc---CC-------ccEEEEecCCCCChhhhc----CCcc------------cHHHHHHHHh--cCC
Q 039565            6 RNKLTGPLLVELIGK---QK-------NNALELGFRGNPELVDQQ----GKEE------------VCCPGLEYLH--QGL   57 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~-------~~~lv~e~~~~~~L~~~~----~~~~------------~i~~~l~~Lh--~~~   57 (188)
                      +..++||||++++++   ..       ..+++|||+++ +|...+    ....            |++.||.|||  +  
T Consensus        73 l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~--  149 (360)
T 3e3p_A           73 LAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPS--  149 (360)
T ss_dssp             HHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTT--
T ss_pred             HHhcCCCCcccHHHhhhccccccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCC--
Confidence            456799999999988   11       27899999996 544333    1211            9999999999  8  


Q ss_pred             CCCcEEeCCCCCcEEEcc-CCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHH
Q 039565           58 KHPIIQRDMKSTNILLNE-KVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEI  129 (188)
Q Consensus        58 ~~~i~h~dl~~~nill~~-~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~  129 (188)
                       .+++||||||+||+++. ++.+||+|||++.....   ........|+..|+|||       ++.++|+||||+++|+|
T Consensus       150 -~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el  225 (360)
T 3e3p_A          150 -VNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSP---SEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEM  225 (360)
T ss_dssp             -TCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCT---TSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHH
T ss_pred             -CCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCC---CCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHH
Confidence             99999999999999997 89999999999875431   12233456788899998       57889999999999999


Q ss_pred             HhCCccccccCCCC-------------------------------------------cCHHHHHHHHHHHHHccCcCCCC
Q 039565          130 ITGILTVDLSFKGE-------------------------------------------FDIISVEKAVEIAMASVSSKVNR  166 (188)
Q Consensus       130 ~~g~~p~~~~~~~~-------------------------------------------~~~~~~~~~~~l~~~cl~~~p~~  166 (188)
                      ++|..||.......                                           .....+..+.+++..||+.||.+
T Consensus       226 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  305 (360)
T 3e3p_A          226 MLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEE  305 (360)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGG
T ss_pred             HhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccc
Confidence            99999986432110                                           00113568999999999999999


Q ss_pred             CCCHHHHHH--HHhhcc
Q 039565          167 RPLMNQVVM--VREQGS  181 (188)
Q Consensus       167 Rps~~~i~~--~l~~~~  181 (188)
                      |||++++++  .+++..
T Consensus       306 Rpt~~e~l~hp~f~~~~  322 (360)
T 3e3p_A          306 RMKPYEALCHPYFDELH  322 (360)
T ss_dssp             SCCHHHHTTSGGGGGGG
T ss_pred             cCCHHHHhcCccccccC
Confidence            999999987  344443

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.97  E-value=6.8e-33  Score=211.76  Aligned_cols=163  Identities=21%  Similarity=0.237  Sum_probs=125.1

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcC----Cc-c-----------cHHHHHHHHhcCCCC-CcEEeC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQG----KE-E-----------VCCPGLEYLHQGLKH-PIIQRD   65 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~----~~-~-----------~i~~~l~~Lh~~~~~-~i~h~d   65 (188)
                      +..++||||++++++   ....+++|||++ |+|.+++.    .. .           |++.||.|||+   . +++|+|
T Consensus        60 ~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~i~H~d  135 (290)
T 3fme_A           60 MRTVDCPFTVTFYGALFREGDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRD  135 (290)
T ss_dssp             HTTCCCTTBCCEEEEEECSSSEEEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---HSCCCCCC
T ss_pred             HHhCCCCeEEEEeeeeeccCCEEEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCC
Confidence            456899999999998   778999999998 58877661    11 1           99999999999   7 999999


Q ss_pred             CCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC----------CCCccchHHHHHHHHHHHhCCcc
Q 039565           66 MKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE----------LTEKSDVDSFEIVILEIITGILT  135 (188)
Q Consensus        66 l~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe----------~~~~~di~s~G~~l~~~~~g~~p  135 (188)
                      +||+||+++.++.+||+|||++.....   ........|++.|++||          ++.++|+||||+++|++++|..|
T Consensus       136 lkp~Nil~~~~~~~kl~Dfg~~~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p  212 (290)
T 3fme_A          136 VKPSNVLINALGQVKMCDFGISGYLVD---DVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFP  212 (290)
T ss_dssp             CSGGGCEECTTCCEEBCCC------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCS
T ss_pred             CCHHHEEECCCCCEEEeecCCcccccc---cccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCC
Confidence            999999999999999999999875431   11223346888899988          35689999999999999999999


Q ss_pred             ccccCC--------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          136 VDLSFK--------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       136 ~~~~~~--------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      |+....              .......+..+.+++..||+.+|++|||++++++
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          213 YDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             SCCCSCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             ccccCchHHHHHHHhccCCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence            864211              1111234567899999999999999999999987

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.97  E-value=1.6e-32  Score=213.07  Aligned_cols=165  Identities=25%  Similarity=0.274  Sum_probs=128.9

Q ss_pred             cccc-cCCCeeeeccc---------CCccEEEEecCCCCChhhhc-CCc--c-----------cHHHHHHHHhcCCCCCc
Q 039565            6 RNKL-TGPLLVELIGK---------QKNNALELGFRGNPELVDQQ-GKE--E-----------VCCPGLEYLHQGLKHPI   61 (188)
Q Consensus         6 l~~l-~Hpniv~~~~~---------~~~~~lv~e~~~~~~L~~~~-~~~--~-----------~i~~~l~~Lh~~~~~~i   61 (188)
                      +.++ +||||++++++         ....+++|||+++++|.+++ ...  .           |++.||.|||+   .++
T Consensus        74 l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i  150 (326)
T 2x7f_A           74 LKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ---HKV  150 (326)
T ss_dssp             HHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHH---TTC
T ss_pred             HHhccCCCCeeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH---CCc
Confidence            3455 79999999998         24679999999999999998 221  1           99999999999   999


Q ss_pred             EEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-----------CCCccchHHHHHHHHHHH
Q 039565           62 IQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-----------LTEKSDVDSFEIVILEII  130 (188)
Q Consensus        62 ~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-----------~~~~~di~s~G~~l~~~~  130 (188)
                      +|+||+|+||+++.++.++|+|||++.....  .........|+..|++||           ++.++|+||||+++|+++
T Consensus       151 vH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~  228 (326)
T 2x7f_A          151 IHRDIKGQNVLLTENAEVKLVDFGVSAQLDR--TVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMA  228 (326)
T ss_dssp             CCCCCSGGGEEECTTCCEEECCCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHH
T ss_pred             cccCCcHHHEEEcCCCCEEEeeCcCceecCc--CccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHH
Confidence            9999999999999999999999999875421  111233456888899987           467899999999999999


Q ss_pred             hCCccccccCC-------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          131 TGILTVDLSFK-------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       131 ~g~~p~~~~~~-------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      +|..||.....             .......+..+.+++..||..+|.+|||++++++
T Consensus       229 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  286 (326)
T 2x7f_A          229 EGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMK  286 (326)
T ss_dssp             HSSCTTTTSCHHHHHHHHHHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             hCCCCCCCCcHHHHHHHhhcCccccCCccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            99999854211             1112234568899999999999999999999987

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.97  E-value=6.3e-32  Score=217.97  Aligned_cols=165  Identities=22%  Similarity=0.300  Sum_probs=127.1

Q ss_pred             ccc-cCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            7 NKL-TGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         7 ~~l-~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      .++ +||||++++++   ....+++|||+. |+|.+++ ....            |++.||.|||+   .+|+||||||+
T Consensus        72 ~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~  147 (432)
T 3p23_A           72 RESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHS---LNIVHRDLKPH  147 (432)
T ss_dssp             HHSCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHH---TTCCCCCCSTT
T ss_pred             HhccCCCCcCeEEEEEecCCEEEEEEECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHH---CcCEeCCCCHH
Confidence            445 79999999998   778899999997 5999998 2221            99999999999   99999999999


Q ss_pred             cEEEcc-----CCceEEecccCcccccCCCC-CcceeeecccccccCCCC---------CCccchHHHHHHHHHHHh-CC
Q 039565           70 NILLNE-----KVQAKLADFGQSRISPVEGG-THMSTTIAGTAGFLNTEL---------TEKSDVDSFEIVILEIIT-GI  133 (188)
Q Consensus        70 nill~~-----~~~~kl~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~pe~---------~~~~di~s~G~~l~~~~~-g~  133 (188)
                      ||+++.     ...++|+|||+++....... ........|++.|+|||.         +.++|||||||++|++++ |.
T Consensus       148 NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~  227 (432)
T 3p23_A          148 NILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGS  227 (432)
T ss_dssp             SEEECCCBTTTBCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSC
T ss_pred             HEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCC
Confidence            999953     23578999999876432211 122334679999999992         447999999999999999 88


Q ss_pred             ccccccCCC--------------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          134 LTVDLSFKG--------------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       134 ~p~~~~~~~--------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      .||......              .........+.+++..||+.+|.+|||++++++
T Consensus       228 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          228 HPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             BTTBSTTTHHHHHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCcchhhHHHHHHHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence            888543211              112345566889999999999999999999984

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.97  E-value=9.4e-33  Score=215.96  Aligned_cols=163  Identities=18%  Similarity=0.234  Sum_probs=118.2

Q ss_pred             cccccCCCeeeeccc-------CCccEEEEecCCCCChhhhc-CCc----c---------cHHHHHHHHhcCCCCCcEEe
Q 039565            6 RNKLTGPLLVELIGK-------QKNNALELGFRGNPELVDQQ-GKE----E---------VCCPGLEYLHQGLKHPIIQR   64 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-------~~~~~lv~e~~~~~~L~~~~-~~~----~---------~i~~~l~~Lh~~~~~~i~h~   64 (188)
                      +..+.||||++++++       ....++||||+++|+|.+++ .+.    .         |++.||.|||+   .+++||
T Consensus        76 ~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~---~~ivH~  152 (336)
T 3fhr_A           76 WQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHR  152 (336)
T ss_dssp             HHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHH---TTEECS
T ss_pred             HHhcCCCChHHHHHHHhhccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecC
Confidence            345789999999998       23378999999999999999 332    1         99999999999   999999


Q ss_pred             CCCCCcEEEcc---CCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCcc
Q 039565           65 DMKSTNILLNE---KVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILT  135 (188)
Q Consensus        65 dl~~~nill~~---~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p  135 (188)
                      ||||+||+++.   ++.+||+|||++....    ........+++.|++||      ++.++|+||||+++|++++|..|
T Consensus       153 dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p  228 (336)
T 3fhr_A          153 DVKPENLLYTSKEKDAVLKLTDFGFAKETT----QNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPP  228 (336)
T ss_dssp             CCSGGGEEESCSSTTCCEEECCCTTCEEC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred             CCCHHHEEEEecCCCceEEEeccccceecc----ccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCC
Confidence            99999999986   4559999999987542    11223456788999999      36689999999999999999999


Q ss_pred             ccccCCCCc-------------------CHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          136 VDLSFKGEF-------------------DIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       136 ~~~~~~~~~-------------------~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      |........                   ....+..+.+++..||+.+|++|||++++++
T Consensus       229 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  287 (336)
T 3fhr_A          229 FYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN  287 (336)
T ss_dssp             C---------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CCCccchhhhhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            854322111                   1234668899999999999999999999998

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.97  E-value=1.6e-32  Score=218.03  Aligned_cols=163  Identities=17%  Similarity=0.135  Sum_probs=129.3

Q ss_pred             cccccCCCeeeeccc---CC--------------------------------------ccEEEEecCCCCChhhhcC---
Q 039565            6 RNKLTGPLLVELIGK---QK--------------------------------------NNALELGFRGNPELVDQQG---   41 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~--------------------------------------~~~lv~e~~~~~~L~~~~~---   41 (188)
                      +++++||||++++++   ..                                      ..++||||++ ++|.+.+.   
T Consensus        54 l~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~  132 (383)
T 3eb0_A           54 MKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFI  132 (383)
T ss_dssp             HTTCCCTTBCCEEEEEEEC-------------------------------------CCEEEEEECCCS-EEHHHHHHHHH
T ss_pred             HHHcCCCCccchhheeeecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHH
Confidence            567899999999887   11                                      2789999999 57766651   


Q ss_pred             --Ccc-----------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEc-cCCceEEecccCcccccCCCCCcceeeeccccc
Q 039565           42 --KEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTNILLN-EKVQAKLADFGQSRISPVEGGTHMSTTIAGTAG  107 (188)
Q Consensus        42 --~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~-~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~  107 (188)
                        ...           |++.||.|||+   .+++||||||+||+++ .++.+||+|||+++....   ........++..
T Consensus       133 ~~~~~l~~~~~~~i~~qi~~aL~~LH~---~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~t~~  206 (383)
T 3eb0_A          133 RSGRSIPMNLISIYIYQLFRAVGFIHS---LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIP---SEPSVAYICSRF  206 (383)
T ss_dssp             HTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCT---TSCCCCCCCCSS
T ss_pred             hcCCCCCHHHHHHHHHHHHHHHHHHHH---CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCC---CCCCcCcccCCC
Confidence              111           99999999999   9999999999999998 578999999999975431   122334567888


Q ss_pred             ccCCC-------CCCccchHHHHHHHHHHHhCCccccccCCCC-------------------------------------
Q 039565          108 FLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFKGE-------------------------------------  143 (188)
Q Consensus       108 ~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~~-------------------------------------  143 (188)
                      |+|||       ++.++|+||+||++|+|++|..||......+                                     
T Consensus       207 y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~  286 (383)
T 3eb0_A          207 YRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDW  286 (383)
T ss_dssp             CCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCH
T ss_pred             ccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccH
Confidence            99998       5788999999999999999999986432110                                     


Q ss_pred             ---cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          144 ---FDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       144 ---~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                         .+...+..+.+++..||+.+|++|||+.++++
T Consensus       287 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  321 (383)
T 3eb0_A          287 RKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMA  321 (383)
T ss_dssp             HHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence               11123456889999999999999999999985

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.97  E-value=1.2e-32  Score=214.18  Aligned_cols=173  Identities=20%  Similarity=0.201  Sum_probs=121.7

Q ss_pred             ccccc-CCCeeeeccc-----------CCccEEEEecCCCCChhhhcC----Cc--c---------cHHHHHHHHhcCCC
Q 039565            6 RNKLT-GPLLVELIGK-----------QKNNALELGFRGNPELVDQQG----KE--E---------VCCPGLEYLHQGLK   58 (188)
Q Consensus         6 l~~l~-Hpniv~~~~~-----------~~~~~lv~e~~~~~~L~~~~~----~~--~---------~i~~~l~~Lh~~~~   58 (188)
                      +.++. ||||++++++           ....++++||+. |+|.+++.    ..  .         |++.||.|||+   
T Consensus        79 l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---  154 (337)
T 3ll6_A           79 MKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR---  154 (337)
T ss_dssp             HHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHT---
T ss_pred             HHHhccCCChhhccccccccccccccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh---
Confidence            34564 9999999876           234789999997 68988872    11  1         99999999999   


Q ss_pred             CC--cEEeCCCCCcEEEccCCceEEecccCcccccCCCCC----------cceeeecccccccCCCC---------CCcc
Q 039565           59 HP--IIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGT----------HMSTTIAGTAGFLNTEL---------TEKS  117 (188)
Q Consensus        59 ~~--i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~----------~~~~~~~~~~~~~~pe~---------~~~~  117 (188)
                      .+  ++|+||||+||+++.++.+||+|||++.........          .......+++.|++||.         +.++
T Consensus       155 ~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~  234 (337)
T 3ll6_A          155 QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQ  234 (337)
T ss_dssp             SSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHH
T ss_pred             CCCCEEEccCCcccEEECCCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHH
Confidence            88  999999999999999999999999998764322111          11123568889999992         4589


Q ss_pred             chHHHHHHHHHHHhCCccccccCCCC---------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          118 DVDSFEIVILEIITGILTVDLSFKGE---------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       118 di~s~G~~l~~~~~g~~p~~~~~~~~---------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                      |+||||+++|+|++|..||.......         ........+.+++..||+.+|.+|||++++++.|+.+..
T Consensus       235 Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~  308 (337)
T 3ll6_A          235 DIWALGCILYLLCFRQHPFEDGAKLRIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAA  308 (337)
T ss_dssp             HHHHHHHHHHHHHHSSCCC------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhCCCCCcchhHHHhhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            99999999999999999986432211         111233457899999999999999999999999987654

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.97  E-value=5.7e-32  Score=214.83  Aligned_cols=158  Identities=20%  Similarity=0.245  Sum_probs=128.4

Q ss_pred             ccCCCeeeeccc-------CCccEEEEecCCCCChhhhc-CCc----c---------cHHHHHHHHhcCCCC-CcEEeCC
Q 039565            9 LTGPLLVELIGK-------QKNNALELGFRGNPELVDQQ-GKE----E---------VCCPGLEYLHQGLKH-PIIQRDM   66 (188)
Q Consensus         9 l~Hpniv~~~~~-------~~~~~lv~e~~~~~~L~~~~-~~~----~---------~i~~~l~~Lh~~~~~-~i~h~dl   66 (188)
                      .+||||+++++.       ....++||||+. ++|.+++ ...    .         |++.||.|||+   . +++||||
T Consensus        98 ~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~givHrDi  173 (397)
T 1wak_A           98 PNREMVVQLLDDFKISGVNGTHICMVFEVLG-HHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHT---KCRIIHTDI  173 (397)
T ss_dssp             GGGGGBCCEEEEEEEEETTEEEEEEEECCCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECCCC
T ss_pred             CCcceeeeeecceeecCCCCceEEEEEeccC-ccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH---hCCEecCCC
Confidence            358999999987       357899999995 5666655 221    1         99999999999   8 9999999


Q ss_pred             CCCcEEEccCC-------------------------------------------------ceEEecccCcccccCCCCCc
Q 039565           67 KSTNILLNEKV-------------------------------------------------QAKLADFGQSRISPVEGGTH   97 (188)
Q Consensus        67 ~~~nill~~~~-------------------------------------------------~~kl~d~~~~~~~~~~~~~~   97 (188)
                      ||+||+++.++                                                 .+||+|||.+.....     
T Consensus       174 kp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~-----  248 (397)
T 1wak_A          174 KPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHK-----  248 (397)
T ss_dssp             SGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTB-----
T ss_pred             CHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccc-----
Confidence            99999998765                                                 799999999875431     


Q ss_pred             ceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCCC----------------------------
Q 039565           98 MSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKGE----------------------------  143 (188)
Q Consensus        98 ~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~~----------------------------  143 (188)
                      ......|+..|+|||      ++.++|||||||++|+|++|..||+.....+                            
T Consensus       249 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  328 (397)
T 1wak_A          249 HFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKY  328 (397)
T ss_dssp             CSCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTT
T ss_pred             cCccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccc
Confidence            123346888999998      6889999999999999999999996533221                            


Q ss_pred             -------------------------------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          144 -------------------------------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       144 -------------------------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                                     .+...+..+.+++..||+.||++|||++++++
T Consensus       329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  391 (397)
T 1wak_A          329 SKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR  391 (397)
T ss_dssp             GGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred             cccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence                                           23455677889999999999999999999986

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.97  E-value=7.8e-32  Score=219.96  Aligned_cols=171  Identities=17%  Similarity=0.207  Sum_probs=134.4

Q ss_pred             ccccCCC-eeeeccc---CCccEEEEecCCCCChhhhcC--Ccc-----------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            7 NKLTGPL-LVELIGK---QKNNALELGFRGNPELVDQQG--KEE-----------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         7 ~~l~Hpn-iv~~~~~---~~~~~lv~e~~~~~~L~~~~~--~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      ..++|++ +..+..+   ....+++|||+ +++|.+++.  ...           |++.||.|||+   .+|+||||||+
T Consensus        57 ~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDIKP~  132 (483)
T 3sv0_A           57 RILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS---KSFLHRDIKPD  132 (483)
T ss_dssp             HHTTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGG
T ss_pred             HHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCcc
Confidence            4556644 4344333   77889999999 789999983  222           99999999999   99999999999


Q ss_pred             cEEE---ccCCceEEecccCcccccCCCCC-----cceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCcc
Q 039565           70 NILL---NEKVQAKLADFGQSRISPVEGGT-----HMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILT  135 (188)
Q Consensus        70 nill---~~~~~~kl~d~~~~~~~~~~~~~-----~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p  135 (188)
                      ||++   +.++.+||+|||+++........     .......|+..|++||      ++.++||||||+++|+|++|..|
T Consensus       133 NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~P  212 (483)
T 3sv0_A          133 NFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLP  212 (483)
T ss_dssp             GEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred             eEEEecCCCCCeEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCC
Confidence            9999   57889999999999865422221     1122567899999998      57889999999999999999999


Q ss_pred             ccccCCCCcC-------------------HHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhcc
Q 039565          136 VDLSFKGEFD-------------------IISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGS  181 (188)
Q Consensus       136 ~~~~~~~~~~-------------------~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~  181 (188)
                      |.........                   ...+..+.+++..||+.+|++||++++|++.|+.+.
T Consensus       213 f~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~  277 (483)
T 3sv0_A          213 WQGLKAGTKKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLF  277 (483)
T ss_dssp             TSSCCCSSHHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred             CccccchhHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence            9764332210                   112357899999999999999999999999998764

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.97  E-value=3.9e-32  Score=208.31  Aligned_cols=167  Identities=25%  Similarity=0.348  Sum_probs=127.0

Q ss_pred             cccccCCCeeeeccc----------------CCccEEEEecCCCCChhhhcC-Cc-c-----------cHHHHHHHHhcC
Q 039565            6 RNKLTGPLLVELIGK----------------QKNNALELGFRGNPELVDQQG-KE-E-----------VCCPGLEYLHQG   56 (188)
Q Consensus         6 l~~l~Hpniv~~~~~----------------~~~~~lv~e~~~~~~L~~~~~-~~-~-----------~i~~~l~~Lh~~   56 (188)
                      +.+++||||++++++                ....+++|||+++++|.+++. .. .           |++.||+|||+ 
T Consensus        56 l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~-  134 (303)
T 1zy4_A           56 LASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHS-  134 (303)
T ss_dssp             HTTCCCTTBCCEEEEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHH-
T ss_pred             HHhcCchHHHHHHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHh-
Confidence            567899999999875                246789999999999999992 22 1           99999999999 


Q ss_pred             CCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCC------------CCcceeeecccccccCCC-------CCCcc
Q 039565           57 LKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEG------------GTHMSTTIAGTAGFLNTE-------LTEKS  117 (188)
Q Consensus        57 ~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~------------~~~~~~~~~~~~~~~~pe-------~~~~~  117 (188)
                        .+++|+|+||+||+++.++.++|+|||.+.......            .........|+..|++||       ++.++
T Consensus       135 --~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  212 (303)
T 1zy4_A          135 --QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKI  212 (303)
T ss_dssp             --TTCCCSCCCGGGEEECTTSCEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHH
T ss_pred             --CCeecccCCHHhEEEcCCCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchh
Confidence              999999999999999999999999999987542110            011223456888899998       57789


Q ss_pred             chHHHHHHHHHHHhCCccc-------------cccCCCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          118 DVDSFEIVILEIITGILTV-------------DLSFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       118 di~s~G~~l~~~~~g~~p~-------------~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      |+||||+++|+|+++..+.             ....+...+...+..+.+++..||+.||.+|||++++++
T Consensus       213 Di~slG~il~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  283 (303)
T 1zy4_A          213 DMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN  283 (303)
T ss_dssp             HHHHHHHHHHHHHSCCSSHHHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hHHHHHHHHHHHHhccCCchhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence            9999999999999843211             011223344455667899999999999999999999987

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.97  E-value=7.3e-32  Score=217.41  Aligned_cols=160  Identities=18%  Similarity=0.182  Sum_probs=130.3

Q ss_pred             ccccCCCeeeeccc---CCccEEEEecCCCCChhhhc--CCc---c---------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            7 NKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ--GKE---E---------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         7 ~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~--~~~---~---------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      ...+|+||+++++.   ....+++|||+. ++|.+++  ...   .         |++.||+|||+   .+|+||||||+
T Consensus       154 ~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~  229 (429)
T 3kvw_A          154 DKDNTMNVIHMLENFTFRNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHK---NRIIHCDLKPE  229 (429)
T ss_dssp             CTTSCSCBCCEEEEEEETTEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---HTEECSCCSGG
T ss_pred             cccCCcCEEEEEeecccCCeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHH
Confidence            34578999999998   788999999997 6899888  221   1         99999999999   99999999999


Q ss_pred             cEEEccCCc--eEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC
Q 039565           70 NILLNEKVQ--AKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK  141 (188)
Q Consensus        70 nill~~~~~--~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~  141 (188)
                      ||+++.++.  +||+|||++....     .......|++.|+|||      ++.++|||||||++|+|++|..||.....
T Consensus       230 NILl~~~~~~~vkL~DFG~a~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~  304 (429)
T 3kvw_A          230 NILLKQQGRSGIKVIDFGSSCYEH-----QRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE  304 (429)
T ss_dssp             GEEESSTTSCCEEECCCTTCEETT-----CCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             HeEEccCCCcceEEeecccceecC-----CcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCH
Confidence            999999887  9999999986432     1223457888999999      78999999999999999999988854221


Q ss_pred             CC----------------------------------------------------------------------cCHHHHHH
Q 039565          142 GE----------------------------------------------------------------------FDIISVEK  151 (188)
Q Consensus       142 ~~----------------------------------------------------------------------~~~~~~~~  151 (188)
                      .+                                                                      ........
T Consensus       305 ~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  384 (429)
T 3kvw_A          305 GDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPL  384 (429)
T ss_dssp             HHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHH
T ss_pred             HHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHH
Confidence            00                                                                      00001356


Q ss_pred             HHHHHHHccCcCCCCCCCHHHHHH
Q 039565          152 AVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       152 ~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      +.+++..||+.||++|||++++++
T Consensus       385 ~~dli~~~L~~dP~~Rpta~e~L~  408 (429)
T 3kvw_A          385 FLDFLKQCLEWDPAVRMTPGQALR  408 (429)
T ss_dssp             HHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHCCCChhhCCCHHHHhC
Confidence            889999999999999999999987

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.97  E-value=9.3e-32  Score=211.33  Aligned_cols=161  Identities=20%  Similarity=0.237  Sum_probs=129.3

Q ss_pred             cccccCCCeeeeccc---CC------ccEEEEecCCCCChhhhc-CCcc---------cHHHHHHHHhcCCCCCcEEeCC
Q 039565            6 RNKLTGPLLVELIGK---QK------NNALELGFRGNPELVDQQ-GKEE---------VCCPGLEYLHQGLKHPIIQRDM   66 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~------~~~lv~e~~~~~~L~~~~-~~~~---------~i~~~l~~Lh~~~~~~i~h~dl   66 (188)
                      +.+++||||++++++   ..      ..+++|||+. ++|.+++ ....         |++.||.|||+   .+++|+||
T Consensus        77 l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~dl  152 (353)
T 3coi_A           77 LKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDL  152 (353)
T ss_dssp             HHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECCS-EEGGGTTTSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSC
T ss_pred             HHhcCCCCcccHhheEecccccccceeEEEEecccc-CCHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCC
Confidence            567899999999998   22      3499999998 6898888 3333         99999999999   99999999


Q ss_pred             CCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCcccccc
Q 039565           67 KSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLS  139 (188)
Q Consensus        67 ~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~  139 (188)
                      ||+||+++.++.+||+|||++.....     ......++..|++||       ++.++|+||||+++|+|++|..||...
T Consensus       153 kp~NIl~~~~~~~kl~Dfg~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~  227 (353)
T 3coi_A          153 KPGNLAVNEDCELKILDFGLARHADA-----EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK  227 (353)
T ss_dssp             CGGGEEECTTCCEEECSTTCTTC-------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSS
T ss_pred             CHHHEeECCCCcEEEeecccccCCCC-----CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            99999999999999999999875321     123456788899988       578899999999999999999998643


Q ss_pred             CC------------------------------------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          140 FK------------------------------------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       140 ~~------------------------------------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ..                                          .......+..+.+++..||+.||++|||++++++
T Consensus       228 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  305 (353)
T 3coi_A          228 DYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT  305 (353)
T ss_dssp             CHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             CHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            21                                          0011234567899999999999999999999986

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.97  E-value=9.9e-33  Score=221.88  Aligned_cols=169  Identities=20%  Similarity=0.163  Sum_probs=130.4

Q ss_pred             cccccCCCeeeeccc---------CCccEEEEecCCCCChhhhcC-----Ccc-----------cHHHHHHHHhcCCCCC
Q 039565            6 RNKLTGPLLVELIGK---------QKNNALELGFRGNPELVDQQG-----KEE-----------VCCPGLEYLHQGLKHP   60 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---------~~~~~lv~e~~~~~~L~~~~~-----~~~-----------~i~~~l~~Lh~~~~~~   60 (188)
                      |.+++||||++++++         ....++||||+++ +|...+.     ...           |++.||.|||+   .+
T Consensus       101 l~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~  176 (420)
T 1j1b_A          101 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---FG  176 (420)
T ss_dssp             HHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT---TT
T ss_pred             HHHcCCCCccceeeEEeccCCCCcceeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CC
Confidence            567899999999877         1236799999995 5655441     111           99999999999   99


Q ss_pred             cEEeCCCCCcEEEccC-CceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhC
Q 039565           61 IIQRDMKSTNILLNEK-VQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITG  132 (188)
Q Consensus        61 i~h~dl~~~nill~~~-~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g  132 (188)
                      |+||||||+||+++.+ +.+||+|||+++.....   .......|+..|+|||       ++.++|||||||++|+|++|
T Consensus       177 ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G  253 (420)
T 1j1b_A          177 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG---EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG  253 (420)
T ss_dssp             EECSCCSGGGEEEETTTTEEEECCCTTCEECCTT---CCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHS
T ss_pred             ccccCCChhhEEEeCCCCeEEeccchhhhhcccC---CCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhC
Confidence            9999999999999965 57899999999854311   1233457888999998       57789999999999999999


Q ss_pred             CccccccCCCC----------------------------------------cCHHHHHHHHHHHHHccCcCCCCCCCHHH
Q 039565          133 ILTVDLSFKGE----------------------------------------FDIISVEKAVEIAMASVSSKVNRRPLMNQ  172 (188)
Q Consensus       133 ~~p~~~~~~~~----------------------------------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~  172 (188)
                      ..||......+                                        ++...+..+.+++.+||+.||.+|||+.+
T Consensus       254 ~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e  333 (420)
T 1j1b_A          254 QPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE  333 (420)
T ss_dssp             SCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHH
Confidence            99985432100                                        11123467899999999999999999999


Q ss_pred             HHH--HHhhcc
Q 039565          173 VVM--VREQGS  181 (188)
Q Consensus       173 i~~--~l~~~~  181 (188)
                      +++  .++++.
T Consensus       334 ~l~hp~f~~~~  344 (420)
T 1j1b_A          334 ACAHSFFDELR  344 (420)
T ss_dssp             HHTSGGGGGGG
T ss_pred             HhCCHhhcccc
Confidence            986  444443

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.97  E-value=3.3e-32  Score=215.37  Aligned_cols=161  Identities=20%  Similarity=0.257  Sum_probs=119.4

Q ss_pred             cccccCCCeeeeccc---C------CccEEEEecCCCCChhhhcCCcc-----------cHHHHHHHHhcCCCCCcEEeC
Q 039565            6 RNKLTGPLLVELIGK---Q------KNNALELGFRGNPELVDQQGKEE-----------VCCPGLEYLHQGLKHPIIQRD   65 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~------~~~~lv~e~~~~~~L~~~~~~~~-----------~i~~~l~~Lh~~~~~~i~h~d   65 (188)
                      +.+++||||++++++   .      ...++++|++ +++|.+++....           |++.||.|||+   .+++|||
T Consensus        82 l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~givH~D  157 (367)
T 2fst_X           82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRD  157 (367)
T ss_dssp             HHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECC-CEECC-----CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCC
T ss_pred             HHhCCCCCCCcEEEEEecCCccccCCeEEEEeccc-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCC
Confidence            567899999999998   1      5579999999 479998883322           99999999999   9999999


Q ss_pred             CCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccc
Q 039565           66 MKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        66 l~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      |||+||+++.++.+||+|||+++....     ......|+..|+|||       ++.++|+|||||++|+|++|..||..
T Consensus       158 lkp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  232 (367)
T 2fst_X          158 LKPSNLAVNEDCELKILDFGLARHTAD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG  232 (367)
T ss_dssp             CCGGGEEECTTCCEEECC--------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CCHhhEEECCCCCEEEeeccccccccc-----cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            999999999999999999999875321     123457888999998       57889999999999999999999854


Q ss_pred             cCCCC-------------------------------------cC-----HHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          139 SFKGE-------------------------------------FD-----IISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       139 ~~~~~-------------------------------------~~-----~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ....+                                     .+     ...+..+.+++..||+.||.+|||++++++
T Consensus       233 ~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~  311 (367)
T 2fst_X          233 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  311 (367)
T ss_dssp             SSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence            32100                                     00     011346789999999999999999999987

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.97  E-value=4.6e-32  Score=210.42  Aligned_cols=161  Identities=22%  Similarity=0.233  Sum_probs=131.0

Q ss_pred             cccCCCeeeeccc--------CCccEEEEecCCCCChhhhc-C-C---cc---------cHHHHHHHHhcCCCCCcEEeC
Q 039565            8 KLTGPLLVELIGK--------QKNNALELGFRGNPELVDQQ-G-K---EE---------VCCPGLEYLHQGLKHPIIQRD   65 (188)
Q Consensus         8 ~l~Hpniv~~~~~--------~~~~~lv~e~~~~~~L~~~~-~-~---~~---------~i~~~l~~Lh~~~~~~i~h~d   65 (188)
                      +++||||++++++        ....++++||++ |+|.+++ . .   ..         |++.||.|||+   .+++|+|
T Consensus        70 ~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~gi~H~d  145 (326)
T 1blx_A           70 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRD  145 (326)
T ss_dssp             HTCCTTBCCEEEEEEEEECSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCC
T ss_pred             ccCCCCeEeeeeeeeecccCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH---CCceecc
Confidence            4589999999987        356789999998 6999998 2 1   11         99999999999   9999999


Q ss_pred             CCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCcccccc
Q 039565           66 MKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLS  139 (188)
Q Consensus        66 l~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~  139 (188)
                      +||+||+++.++.++|+|||++....   .........++..|++||      ++.++|+||||+++|++++|..||...
T Consensus       146 lkp~Nili~~~~~~kl~Dfg~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  222 (326)
T 1blx_A          146 LKPQNILVTSSGQIKLADFGLARIYS---FQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGS  222 (326)
T ss_dssp             CCGGGEEECTTCCEEECSCCSCCCCC---GGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             CCHHHeEEcCCCCEEEecCccccccc---CCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCC
Confidence            99999999999999999999987532   112233456788899998      688999999999999999999988542


Q ss_pred             CCC--------------------------------------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          140 FKG--------------------------------------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       140 ~~~--------------------------------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ...                                      ......+..+.+++..||+.+|.+|||+.++++
T Consensus       223 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  296 (326)
T 1blx_A          223 SDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  296 (326)
T ss_dssp             SHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            210                                      011224567789999999999999999999985

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.97  E-value=3.4e-32  Score=211.57  Aligned_cols=163  Identities=21%  Similarity=0.259  Sum_probs=120.1

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcC------Ccc-----------cHHHHHHHHhcCCCC-CcEEe
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQG------KEE-----------VCCPGLEYLHQGLKH-PIIQR   64 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~------~~~-----------~i~~~l~~Lh~~~~~-~i~h~   64 (188)
                      +..++||||++++++   .+..+++|||+++ +|.+++.      ...           |++.||.|||+   . +++|+
T Consensus        75 ~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~ivH~  150 (327)
T 3aln_A           75 MRSSDCPYIVQFYGALFREGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE---NLKIIHR  150 (327)
T ss_dssp             HSSCCCTTBCCEEEEEECSSEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH---HHSCCCS
T ss_pred             HHcCCCCcEeeeeeEEEeCCceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhc---cCCEeEC
Confidence            456789999999998   7788999999995 7777662      111           99999999999   7 99999


Q ss_pred             CCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC----------CCCccchHHHHHHHHHHHhCCc
Q 039565           65 DMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE----------LTEKSDVDSFEIVILEIITGIL  134 (188)
Q Consensus        65 dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe----------~~~~~di~s~G~~l~~~~~g~~  134 (188)
                      ||||+||+++.++.+||+|||++.....   ........|+..|++||          ++.++|+||||+++|+|++|..
T Consensus       151 dlkp~NIll~~~~~~kl~Dfg~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~  227 (327)
T 3aln_A          151 DIKPSNILLDRSGNIKLCDFGISGQLVD---SIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRF  227 (327)
T ss_dssp             CCCGGGEEEETTTEEEECCCSSSCC---------------------------------CCSHHHHHHHHHHHHHHHHSCC
T ss_pred             CCCHHHEEEcCCCCEEEccCCCceeccc---ccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCC
Confidence            9999999999999999999999875431   11222346888899998          3578999999999999999999


Q ss_pred             cccccCC-----------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          135 TVDLSFK-----------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       135 p~~~~~~-----------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ||.....                 .......+..+.+++..||+.+|.+|||++++++
T Consensus       228 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          228 PYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             CSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence            9864211                 0011235678999999999999999999999976

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.97  E-value=2.7e-32  Score=214.02  Aligned_cols=166  Identities=14%  Similarity=0.134  Sum_probs=131.3

Q ss_pred             cccccCCCeeeeccc--------CCccEEEEecCCCCChhhhc--CCcc---------cHHHHHHHHhcCCCCCcEEeCC
Q 039565            6 RNKLTGPLLVELIGK--------QKNNALELGFRGNPELVDQQ--GKEE---------VCCPGLEYLHQGLKHPIIQRDM   66 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--------~~~~~lv~e~~~~~~L~~~~--~~~~---------~i~~~l~~Lh~~~~~~i~h~dl   66 (188)
                      +.+++||||++++++        ....++++||+. ++|.+++  ....         |++.||.|||+   .+++||||
T Consensus        63 l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dl  138 (353)
T 2b9h_A           63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQ-TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHG---SNVIHRDL  138 (353)
T ss_dssp             HHHCCCTTBCCEEEECCCSCSTTCCCEEEEECCCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCC
T ss_pred             HHhCcCCCcCCeeeeecccccCccceEEEEEeccC-ccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCC
Confidence            567899999999988        266899999998 5899988  2222         99999999999   99999999


Q ss_pred             CCCcEEEccCCceEEecccCcccccCCCCC--------cceeeecccccccCCC-------CCCccchHHHHHHHHHHHh
Q 039565           67 KSTNILLNEKVQAKLADFGQSRISPVEGGT--------HMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIIT  131 (188)
Q Consensus        67 ~~~nill~~~~~~kl~d~~~~~~~~~~~~~--------~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~  131 (188)
                      ||+||+++.++.+||+|||++.........        .......|+..|+|||       ++.++|+||||+++|+|++
T Consensus       139 kp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~  218 (353)
T 2b9h_A          139 KPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL  218 (353)
T ss_dssp             CGGGEEECTTCCEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHH
T ss_pred             CHHHeEEcCCCcEEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHh
Confidence            999999999999999999998754321111        0112346788999998       4678999999999999999


Q ss_pred             CCccccccCCC-----------------C--------------------------cCHHHHHHHHHHHHHccCcCCCCCC
Q 039565          132 GILTVDLSFKG-----------------E--------------------------FDIISVEKAVEIAMASVSSKVNRRP  168 (188)
Q Consensus       132 g~~p~~~~~~~-----------------~--------------------------~~~~~~~~~~~l~~~cl~~~p~~Rp  168 (188)
                      |..||......                 .                          .....+..+.+++..||+.||++||
T Consensus       219 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp  298 (353)
T 2b9h_A          219 RRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRI  298 (353)
T ss_dssp             SSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSC
T ss_pred             CCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCC
Confidence            99998543200                 0                          0012345788999999999999999


Q ss_pred             CHHHHHH
Q 039565          169 LMNQVVM  175 (188)
Q Consensus       169 s~~~i~~  175 (188)
                      |++++++
T Consensus       299 t~~ell~  305 (353)
T 2b9h_A          299 TAKEALE  305 (353)
T ss_dssp             CHHHHHT
T ss_pred             CHHHHhc
Confidence            9999987

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.97  E-value=1.3e-31  Score=205.36  Aligned_cols=151  Identities=8%  Similarity=0.059  Sum_probs=126.8

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc----------cHHHHHHHHhcCCCCCcEEeCCCCCcEE
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE----------VCCPGLEYLHQGLKHPIIQRDMKSTNIL   72 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~----------~i~~~l~~Lh~~~~~~i~h~dl~~~nil   72 (188)
                      +.+++||||++++++   .+..++||||+++++|.+++++..          |++.||.|||+   .+++||||||+||+
T Consensus        85 l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~---~givH~Dikp~NIl  161 (286)
T 3uqc_A           85 LSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHR---AGVALSIDHPSRVR  161 (286)
T ss_dssp             HHTCCCTTBCCEEEEEEETTEEEEEEECCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEE
T ss_pred             HhcCCCCCcceeeEEEEECCcEEEEEEecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHH---CCCccCCCCcccEE
Confidence            567899999999999   778999999999999999994322          99999999999   99999999999999


Q ss_pred             EccCCceEEecccCcccccCCCCCcceeeecccccccCCCCCCccchHHHHHHHHHHHhCCccccccCCCC---------
Q 039565           73 LNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILEIITGILTVDLSFKGE---------  143 (188)
Q Consensus        73 l~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~di~s~G~~l~~~~~g~~p~~~~~~~~---------  143 (188)
                      ++.++.+++++++.                      ++ .++.++|+||||+++|+|++|..||.......         
T Consensus       162 l~~~g~~kl~~~~~----------------------~~-~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~  218 (286)
T 3uqc_A          162 VSIDGDVVLAYPAT----------------------MP-DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDT  218 (286)
T ss_dssp             EETTSCEEECSCCC----------------------CT-TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCT
T ss_pred             EcCCCCEEEEeccc----------------------cC-CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHh
Confidence            99999999874331                      12 26789999999999999999999996533211         


Q ss_pred             ---------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          144 ---------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       144 ---------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                               .....+..+.+++..||+.||++| |++++++.|++....
T Consensus       219 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~  266 (286)
T 3uqc_A          219 AGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAV  266 (286)
T ss_dssp             TSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred             ccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhcc
Confidence                     112346689999999999999999 999999999987654

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.97  E-value=5.8e-32  Score=208.96  Aligned_cols=166  Identities=17%  Similarity=0.192  Sum_probs=130.0

Q ss_pred             cccccCCCeeeeccc-----------------CCccEEEEecCCCCChhhhcCCcc-----------cHHHHHHHHhcCC
Q 039565            6 RNKLTGPLLVELIGK-----------------QKNNALELGFRGNPELVDQQGKEE-----------VCCPGLEYLHQGL   57 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-----------------~~~~~lv~e~~~~~~L~~~~~~~~-----------~i~~~l~~Lh~~~   57 (188)
                      +.+++||||++++++                 ....+++|||++ |+|.+++.+..           |++.||+|||+  
T Consensus        62 l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~--  138 (320)
T 2i6l_A           62 IRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYME-TDLANVLEQGPLLEEHARLFMYQLLRGLKYIHS--  138 (320)
T ss_dssp             HHTCCCTTBCCEEEEECTTSCBCCC----CCSCSEEEEEEECCS-EEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH--
T ss_pred             HHhcCCCCeeEEEEeccccccccccccccccccCceeEEeeccC-CCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHh--
Confidence            567899999999876                 256789999998 69999984332           99999999999  


Q ss_pred             CCCcEEeCCCCCcEEEc-cCCceEEecccCcccccCCCC-CcceeeecccccccCCC-------CCCccchHHHHHHHHH
Q 039565           58 KHPIIQRDMKSTNILLN-EKVQAKLADFGQSRISPVEGG-THMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILE  128 (188)
Q Consensus        58 ~~~i~h~dl~~~nill~-~~~~~kl~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~  128 (188)
                       .+++|+||||+||+++ .++.+||+|||++........ ........++..|++||       ++.++|+||||+++|+
T Consensus       139 -~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~e  217 (320)
T 2i6l_A          139 -ANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAE  217 (320)
T ss_dssp             -TTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHH
T ss_pred             -CCEecCCCCHHHEEEcCCCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHH
Confidence             9999999999999997 567899999999875431111 11223345677888888       5678999999999999


Q ss_pred             HHhCCccccccCCCC-----------------------------------------cCHHHHHHHHHHHHHccCcCCCCC
Q 039565          129 IITGILTVDLSFKGE-----------------------------------------FDIISVEKAVEIAMASVSSKVNRR  167 (188)
Q Consensus       129 ~~~g~~p~~~~~~~~-----------------------------------------~~~~~~~~~~~l~~~cl~~~p~~R  167 (188)
                      +++|..||......+                                         .....+..+.+++..||+.+|++|
T Consensus       218 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  297 (320)
T 2i6l_A          218 MLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDR  297 (320)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGS
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCcccc
Confidence            999999986432100                                         001135678899999999999999


Q ss_pred             CCHHHHHH
Q 039565          168 PLMNQVVM  175 (188)
Q Consensus       168 ps~~~i~~  175 (188)
                      ||++++++
T Consensus       298 pt~~ell~  305 (320)
T 2i6l_A          298 LTAEEALS  305 (320)
T ss_dssp             CCHHHHHT
T ss_pred             CCHHHHhC
Confidence            99999987

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.97  E-value=1.3e-31  Score=204.77  Aligned_cols=169  Identities=22%  Similarity=0.267  Sum_probs=135.6

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-C--Ccc---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-G--KEE---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~--~~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +++++||||++++++   ....++++||+++++|.+++ .  ...         |++.||.|||+   .+++|+|++|+|
T Consensus        75 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~N  151 (287)
T 2wei_A           75 LKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPEN  151 (287)
T ss_dssp             HHTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGG
T ss_pred             HHhccCCCccEEEEEEeCCCeEEEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChhh
Confidence            567899999999998   77889999999999998888 2  222         99999999999   999999999999


Q ss_pred             EEEccC---CceEEecccCcccccCCCCCcceeeecccccccCCC-----CCCccchHHHHHHHHHHHhCCccccccCCC
Q 039565           71 ILLNEK---VQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-----LTEKSDVDSFEIVILEIITGILTVDLSFKG  142 (188)
Q Consensus        71 ill~~~---~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-----~~~~~di~s~G~~l~~~~~g~~p~~~~~~~  142 (188)
                      |+++.+   +.+||+|||++......   .......++..|++||     ++.++|+||||+++|++++|..||......
T Consensus       152 Ilv~~~~~~~~~kL~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~  228 (287)
T 2wei_A          152 ILLESKEKDCDIKIIDFGLSTCFQQN---TKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEY  228 (287)
T ss_dssp             EEESCSSTTCCEEECSTTGGGTBCCC---SSCSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             EEEecCCCcccEEEeccCcceeecCC---CccccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCCCCHH
Confidence            999764   46999999998754311   1223345778899988     688999999999999999999998542210


Q ss_pred             -------------CcC--HHHHHHHHHHHHHccCcCCCCCCCHHHHHH--HHhhc
Q 039565          143 -------------EFD--IISVEKAVEIAMASVSSKVNRRPLMNQVVM--VREQG  180 (188)
Q Consensus       143 -------------~~~--~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~--~l~~~  180 (188)
                                   ..+  ...+..+.+++..||+.+|++|||++++++  .+++.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~  283 (287)
T 2wei_A          229 DILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY  283 (287)
T ss_dssp             HHHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred             HHHHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHhcc
Confidence                         111  234567899999999999999999999998  44443

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.97  E-value=1.1e-31  Score=211.77  Aligned_cols=158  Identities=19%  Similarity=0.246  Sum_probs=127.5

Q ss_pred             ccCCCeeeeccc---C----CccEEEEecCCCCChhhhc-C-C-c--c---------cHHHHHHHHhcCCCC-CcEEeCC
Q 039565            9 LTGPLLVELIGK---Q----KNNALELGFRGNPELVDQQ-G-K-E--E---------VCCPGLEYLHQGLKH-PIIQRDM   66 (188)
Q Consensus         9 l~Hpniv~~~~~---~----~~~~lv~e~~~~~~L~~~~-~-~-~--~---------~i~~~l~~Lh~~~~~-~i~h~dl   66 (188)
                      +.||||++++++   .    ...++++||+ +++|.+++ . . .  .         |++.||.|||+   . +++||||
T Consensus        83 ~~~~~i~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~~ivH~Di  158 (373)
T 1q8y_A           83 MGANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHR---RCGIIHTDI  158 (373)
T ss_dssp             HHHTTBCCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECSCC
T ss_pred             cccchHHHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHh---cCCEEecCC
Confidence            359999999998   2    2689999999 78999998 2 1 1  1         99999999999   8 9999999


Q ss_pred             CCCcEEEcc------CCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCc
Q 039565           67 KSTNILLNE------KVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGIL  134 (188)
Q Consensus        67 ~~~nill~~------~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~  134 (188)
                      ||+||+++.      .+.+||+|||++.....     ......|+..|+|||      ++.++|+||||+++|+|++|..
T Consensus       159 kp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~  233 (373)
T 1q8y_A          159 KPENVLMEIVDSPENLIQIKIADLGNACWYDE-----HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDF  233 (373)
T ss_dssp             SGGGEEEEEEETTTTEEEEEECCCTTCEETTB-----CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             ChHHeEEeccCCCcCcceEEEcccccccccCC-----CCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCC
Confidence            999999953      34799999999875431     122346788999998      6889999999999999999999


Q ss_pred             cccccCCC-----------------------------------------------------------CcCHHHHHHHHHH
Q 039565          135 TVDLSFKG-----------------------------------------------------------EFDIISVEKAVEI  155 (188)
Q Consensus       135 p~~~~~~~-----------------------------------------------------------~~~~~~~~~~~~l  155 (188)
                      ||+.....                                                           ..+...+..+.++
T Consensus       234 pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  313 (373)
T 1q8y_A          234 LFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDF  313 (373)
T ss_dssp             CC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHH
T ss_pred             CCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHH
Confidence            99643211                                                           1234567789999


Q ss_pred             HHHccCcCCCCCCCHHHHHH
Q 039565          156 AMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       156 ~~~cl~~~p~~Rps~~~i~~  175 (188)
                      +..||+.||++|||++++++
T Consensus       314 i~~~L~~dP~~Rpt~~ell~  333 (373)
T 1q8y_A          314 LSPMLQLDPRKRADAGGLVN  333 (373)
T ss_dssp             HGGGGCSSTTTCBCHHHHHT
T ss_pred             HHHHhccCccccCCHHHHhh
Confidence            99999999999999999987

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.97  E-value=5.4e-31  Score=204.87  Aligned_cols=162  Identities=15%  Similarity=0.215  Sum_probs=130.3

Q ss_pred             cCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc----c---------cHHHHHHHHhcCCCCCcEEeCCCCCcEE
Q 039565           10 TGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE----E---------VCCPGLEYLHQGLKHPIIQRDMKSTNIL   72 (188)
Q Consensus        10 ~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~----~---------~i~~~l~~Lh~~~~~~i~h~dl~~~nil   72 (188)
                      .|+++++++++   .+..++||||+ +++|.+++ ...    .         |++.||.|||+   .+++||||||+||+
T Consensus        75 ~~~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil  150 (339)
T 1z57_A           75 STFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHS---NKLTHTDLKPENIL  150 (339)
T ss_dssp             CTTCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEE
T ss_pred             CceeeEeeecccccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEE
Confidence            45568999888   78899999999 68999998 222    1         99999999999   99999999999999


Q ss_pred             Ecc-------------------CCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHH
Q 039565           73 LNE-------------------KVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVIL  127 (188)
Q Consensus        73 l~~-------------------~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~  127 (188)
                      ++.                   ++.+||+|||++.....     ......|+..|+|||      ++.++|+||||+++|
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~  225 (339)
T 1z57_A          151 FVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDE-----HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILI  225 (339)
T ss_dssp             ESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTS-----CCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHH
T ss_pred             EeccccccccCCccccccccccCCCceEeeCcccccCcc-----ccccccCCccccChHHhhCCCCCcchhhHHHHHHHH
Confidence            987                   66799999999875321     123456888999998      688999999999999


Q ss_pred             HHHhCCccccccCCCC-------------------------------------------------------cCHHHHHHH
Q 039565          128 EIITGILTVDLSFKGE-------------------------------------------------------FDIISVEKA  152 (188)
Q Consensus       128 ~~~~g~~p~~~~~~~~-------------------------------------------------------~~~~~~~~~  152 (188)
                      ++++|..||......+                                                       .....+..+
T Consensus       226 el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  305 (339)
T 1z57_A          226 EYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERL  305 (339)
T ss_dssp             HHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHH
T ss_pred             HHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHH
Confidence            9999999885432110                                                       112345678


Q ss_pred             HHHHHHccCcCCCCCCCHHHHHHH--Hhhc
Q 039565          153 VEIAMASVSSKVNRRPLMNQVVMV--REQG  180 (188)
Q Consensus       153 ~~l~~~cl~~~p~~Rps~~~i~~~--l~~~  180 (188)
                      .+++..||+.||.+|||++++++.  ++.+
T Consensus       306 ~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  335 (339)
T 1z57_A          306 FDLIQKMLEYDPAKRITLREALKHPFFDLL  335 (339)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHTTSGGGGGG
T ss_pred             HHHHHHHhCcCcccccCHHHHhcCHHHHHH
Confidence            899999999999999999999863  4443

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.97  E-value=5.7e-32  Score=208.96  Aligned_cols=159  Identities=21%  Similarity=0.289  Sum_probs=129.8

Q ss_pred             cCCCeeeeccc---CCccEEEEec-CCCCChhhhcC-C--cc---------cHHHHHHHHhcCCCCCcEEeCCCCCcEEE
Q 039565           10 TGPLLVELIGK---QKNNALELGF-RGNPELVDQQG-K--EE---------VCCPGLEYLHQGLKHPIIQRDMKSTNILL   73 (188)
Q Consensus        10 ~Hpniv~~~~~---~~~~~lv~e~-~~~~~L~~~~~-~--~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~nill   73 (188)
                      +||||++++++   .+..++++|+ +.+++|.+++. +  ..         |++.||.|||+   .+++|+|+||+||++
T Consensus        96 ~h~~i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~  172 (312)
T 2iwi_A           96 GHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHS---RGVVHRDIKDENILI  172 (312)
T ss_dssp             CCSSBCCEEEEC-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH---HTEECCCCSGGGEEE
T ss_pred             CCCCeeeEEEEEecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChhhEEE
Confidence            89999999998   7788999999 78899999982 2  22         99999999999   999999999999999


Q ss_pred             c-cCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCcccccc-----C
Q 039565           74 N-EKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLS-----F  140 (188)
Q Consensus        74 ~-~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~-----~  140 (188)
                      + .++.++|+|||++.....    .......|+..|++||       .+.++|+||||+++|++++|..||...     .
T Consensus       173 ~~~~~~~kl~dfg~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~  248 (312)
T 2iwi_A          173 DLRRGCAKLIDFGSGALLHD----EPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEA  248 (312)
T ss_dssp             ETTTTEEEECCCSSCEECCS----SCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHT
T ss_pred             eCCCCeEEEEEcchhhhccc----CcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHHhhh
Confidence            9 788999999999875431    1223456888999998       234799999999999999999998542     1


Q ss_pred             CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          141 KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       141 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ....+...+..+.+++..||+.+|++|||++++++
T Consensus       249 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~  283 (312)
T 2iwi_A          249 ELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILL  283 (312)
T ss_dssp             CCCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             ccCCcccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            11233345668899999999999999999999987

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.97  E-value=8.7e-32  Score=208.12  Aligned_cols=165  Identities=21%  Similarity=0.271  Sum_probs=125.7

Q ss_pred             ccccc--CCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLT--GPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~--Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +.+++  ||||++++++   ....+++|| +.+++|.+++ ....           |++.||.|||+   .+++|+||||
T Consensus        80 l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp  155 (313)
T 3cek_A           80 LNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKP  155 (313)
T ss_dssp             HHHHGGGCTTBCCEEEEEECSSEEEEEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCG
T ss_pred             HHhccccCCceEEEEEEeecCCEEEEEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCc
Confidence            34555  5999999998   778899999 5668999998 3222           99999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCCC-----------------CCccchHHHHHHHHHHHh
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTEL-----------------TEKSDVDSFEIVILEIIT  131 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~-----------------~~~~di~s~G~~l~~~~~  131 (188)
                      +||++++ +.+||+|||++................|++.|+|||.                 +.++|+||||+++|+|++
T Consensus       156 ~NIl~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~  234 (313)
T 3cek_A          156 ANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY  234 (313)
T ss_dssp             GGEEEET-TEEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHH
T ss_pred             ccEEEEC-CeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHh
Confidence            9999965 7999999999876532222222334568889999882                 347999999999999999


Q ss_pred             CCccccccCC--------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          132 GILTVDLSFK--------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       132 g~~p~~~~~~--------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      |..||.....              ...+...+..+.+++..||+.+|.+|||++++++
T Consensus       235 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  292 (313)
T 3cek_A          235 GKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  292 (313)
T ss_dssp             SSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCCchhhHHHHHHHHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence            9999864321              1222333567899999999999999999999987

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.97  E-value=5.7e-32  Score=210.08  Aligned_cols=159  Identities=18%  Similarity=0.222  Sum_probs=130.9

Q ss_pred             cCCCeeeeccc---CCccEEEEecCCC-CChhhhcCC---cc---------cHHHHHHHHhcCCCCCcEEeCCCCCcEEE
Q 039565           10 TGPLLVELIGK---QKNNALELGFRGN-PELVDQQGK---EE---------VCCPGLEYLHQGLKHPIIQRDMKSTNILL   73 (188)
Q Consensus        10 ~Hpniv~~~~~---~~~~~lv~e~~~~-~~L~~~~~~---~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~nill   73 (188)
                      .||||++++++   .+..++++|++.+ ++|.+++..   ..         |++.||.|||+   .+++||||||+||++
T Consensus       106 ~~~~i~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll  182 (320)
T 3a99_A          106 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILI  182 (320)
T ss_dssp             SSCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEE
T ss_pred             CCCCceEEEEEEecCCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCcEeCCCCHHHEEE
Confidence            36999999999   7788999999976 899999822   12         99999999999   999999999999999


Q ss_pred             c-cCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccC-----
Q 039565           74 N-EKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSF-----  140 (188)
Q Consensus        74 ~-~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~-----  140 (188)
                      + .++.+||+|||++.....    .......|+..|++||       .+.++|+||||+++|++++|..||....     
T Consensus       183 ~~~~~~~kL~Dfg~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~  258 (320)
T 3a99_A          183 DLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG  258 (320)
T ss_dssp             ETTTTEEEECCCTTCEECCS----SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHC
T ss_pred             eCCCCCEEEeeCcccccccc----ccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhhhcc
Confidence            9 678999999999875431    1223456888999999       2567899999999999999999985321     


Q ss_pred             CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          141 KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       141 ~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ....+...+..+.+++..||+.+|++|||++++++
T Consensus       259 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  293 (320)
T 3a99_A          259 QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQN  293 (320)
T ss_dssp             CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             cccccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            11122334568899999999999999999999987

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.97  E-value=3.8e-31  Score=224.02  Aligned_cols=165  Identities=18%  Similarity=0.252  Sum_probs=132.3

Q ss_pred             cccccCCCeeeeccc---CCc-----cEEEEecCCCCChhhhc-CCcc---------cHHHHHHHHhcCCCCCcEEeCCC
Q 039565            6 RNKLTGPLLVELIGK---QKN-----NALELGFRGNPELVDQQ-GKEE---------VCCPGLEYLHQGLKHPIIQRDMK   67 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~-----~~lv~e~~~~~~L~~~~-~~~~---------~i~~~l~~Lh~~~~~~i~h~dl~   67 (188)
                      +.+++||||++++++   .+.     .++||||+++++|.+++ ....         |++.||.|||+   .+|+|||||
T Consensus       133 l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~giiHrDlk  209 (681)
T 2pzi_A          133 LAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHS---IGLVYNDLK  209 (681)
T ss_dssp             GGGCCCTTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCS
T ss_pred             HHhcCCCCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH---CCCeecccC
Confidence            678899999999998   222     69999999999999988 3333         99999999999   999999999


Q ss_pred             CCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-----CCCccchHHHHHHHHHHHhCCccccccCCC
Q 039565           68 STNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-----LTEKSDVDSFEIVILEIITGILTVDLSFKG  142 (188)
Q Consensus        68 ~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-----~~~~~di~s~G~~l~~~~~g~~p~~~~~~~  142 (188)
                      |+||+++.+ .+||+|||+++....      .....|++.|++||     .+.++||||||+++|+|++|..|+......
T Consensus       210 p~NIll~~~-~~kl~DFG~a~~~~~------~~~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~  282 (681)
T 2pzi_A          210 PENIMLTEE-QLKLIDLGAVSRINS------FGYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVD  282 (681)
T ss_dssp             GGGEEECSS-CEEECCCTTCEETTC------CSCCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETTEECS
T ss_pred             hHHeEEeCC-cEEEEecccchhccc------CCccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCcccccc
Confidence            999999985 899999999875431      13456899999999     577899999999999999999887654332


Q ss_pred             CcC-----HHHHHHHHHHHHHccCcCCCCCCC-HHHHHHHHhhc
Q 039565          143 EFD-----IISVEKAVEIAMASVSSKVNRRPL-MNQVVMVREQG  180 (188)
Q Consensus       143 ~~~-----~~~~~~~~~l~~~cl~~~p~~Rps-~~~i~~~l~~~  180 (188)
                      ..+     ......+.+++..||+.+|.+||+ ++++.+.|.+.
T Consensus       283 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  326 (681)
T 2pzi_A          283 GLPEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV  326 (681)
T ss_dssp             SCCTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             cccccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence            211     233567899999999999999995 66677666543

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.97  E-value=7.8e-31  Score=219.89  Aligned_cols=172  Identities=23%  Similarity=0.222  Sum_probs=135.2

Q ss_pred             cccccCCCeeeeccc---------CCccEEEEecCCCCChhhhc-CCc-----c---------cHHHHHHHHhcCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---------QKNNALELGFRGNPELVDQQ-GKE-----E---------VCCPGLEYLHQGLKHPI   61 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---------~~~~~lv~e~~~~~~L~~~~-~~~-----~---------~i~~~l~~Lh~~~~~~i   61 (188)
                      +.+++||||++++++         ....++||||+++|+|.+++ ...     .         |++.||.|||+   .++
T Consensus        66 L~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs---~gI  142 (676)
T 3qa8_A           66 MKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE---NRI  142 (676)
T ss_dssp             HHHCCBTTBCCEEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHH---TTB
T ss_pred             HHhCCCCCCCceeeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCC
Confidence            567899999999887         45678999999999999999 321     1         99999999999   999


Q ss_pred             EEeCCCCCcEEEccCCc---eEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhC
Q 039565           62 IQRDMKSTNILLNEKVQ---AKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITG  132 (188)
Q Consensus        62 ~h~dl~~~nill~~~~~---~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g  132 (188)
                      +|||+||+||+++.++.   ++|+|||.+......   .......|+..|++||      ++.++|+||||+++|++++|
T Consensus       143 VHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~---~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG  219 (676)
T 3qa8_A          143 IHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG---ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG  219 (676)
T ss_dssp             CCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSC---CCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSS
T ss_pred             ccCCCCHHHeEeecCCCceeEEEcccccccccccc---cccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHC
Confidence            99999999999997654   899999998764321   2233467889999999      57899999999999999999


Q ss_pred             Ccccccc-----------------------------------CCCCcCHHHHHHHHHHHHHccCcCCCCCCCHHH-----
Q 039565          133 ILTVDLS-----------------------------------FKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQ-----  172 (188)
Q Consensus       133 ~~p~~~~-----------------------------------~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~-----  172 (188)
                      ..||.+.                                   .........+..+.+++..||..||++|||+++     
T Consensus       220 ~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp  299 (676)
T 3qa8_A          220 FRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVG  299 (676)
T ss_dssp             CSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCT
T ss_pred             CCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCH
Confidence            9998532                                   011233456789999999999999999999977     


Q ss_pred             HHHHHhhccCc
Q 039565          173 VVMVREQGSGS  183 (188)
Q Consensus       173 i~~~l~~~~~~  183 (188)
                      .++.++.+...
T Consensus       300 ~F~~l~~iL~~  310 (676)
T 3qa8_A          300 CFQALDSILSL  310 (676)
T ss_dssp             THHHHHHHHCC
T ss_pred             HHHHHHHHHhc
Confidence            45555555443

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.97  E-value=1.7e-31  Score=206.50  Aligned_cols=163  Identities=23%  Similarity=0.309  Sum_probs=123.3

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcC--Cc--c---------cHHHHHHHHhcCCCC-CcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQG--KE--E---------VCCPGLEYLHQGLKH-PIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~--~~--~---------~i~~~l~~Lh~~~~~-~i~h~dl~~   68 (188)
                      +..++||||++++++   .+..+++|||+. +.+..+..  ..  .         |++.||.|||+   . +++|+||+|
T Consensus        78 ~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~-~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~~i~H~dlkp  153 (318)
T 2dyl_A           78 LKSHDCPYIVQCFGTFITNTDVFIAMELMG-TCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKE---KHGVIHRDVKP  153 (318)
T ss_dssp             HHTTTCTTBCCEEEEEECSSEEEEEECCCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH---HHCCCCCCCCG
T ss_pred             HHhcCCCceeeEEEEEecCCcEEEEEeccC-CcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh---hCCEEeCCCCH
Confidence            456789999999998   778899999993 45555442  11  1         99999999998   6 999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-----------CCCccchHHHHHHHHHHHhCCcccc
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-----------LTEKSDVDSFEIVILEIITGILTVD  137 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-----------~~~~~di~s~G~~l~~~~~g~~p~~  137 (188)
                      +||+++.++.+||+|||++.....   ........++..|++||           ++.++|+||||+++|+|++|..||.
T Consensus       154 ~Nil~~~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  230 (318)
T 2dyl_A          154 SNILLDERGQIKLCDFGISGRLVD---DKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYK  230 (318)
T ss_dssp             GGEEECTTSCEEECCCTTC-----------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             HHEEECCCCCEEEEECCCchhccC---CccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCC
Confidence            999999999999999999865431   11223456788899888           3568999999999999999999986


Q ss_pred             ccCC-------------CCc--CHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          138 LSFK-------------GEF--DIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       138 ~~~~-------------~~~--~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ....             ...  ....+..+.+++..||+.+|.+|||++++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          231 NCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             TCCSHHHHHHHHHHSCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             CCCccHHHHHHHhccCCCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            4211             001  1124567899999999999999999999886

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.97  E-value=4.3e-31  Score=203.22  Aligned_cols=148  Identities=18%  Similarity=0.251  Sum_probs=121.5

Q ss_pred             ccccCCCeeeeccc-------CCccEEEEecCCCCChhhhc-CCc----c---------cHHHHHHHHhcCCCCCcEEeC
Q 039565            7 NKLTGPLLVELIGK-------QKNNALELGFRGNPELVDQQ-GKE----E---------VCCPGLEYLHQGLKHPIIQRD   65 (188)
Q Consensus         7 ~~l~Hpniv~~~~~-------~~~~~lv~e~~~~~~L~~~~-~~~----~---------~i~~~l~~Lh~~~~~~i~h~d   65 (188)
                      ...+||||++++++       ....++||||+++++|.+++ ...    .         |++.||.|||+   .+++|+|
T Consensus        66 ~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~d  142 (299)
T 3m2w_A           66 RASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRD  142 (299)
T ss_dssp             HHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHH---TTEECCC
T ss_pred             HhccCCCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCC
Confidence            44689999999987       34578999999999999999 221    1         99999999999   9999999


Q ss_pred             CCCCcEEEcc---CCceEEecccCcccccCCCCCcceeeecccccccCCCCCCccchHHHHHHHHHHHhCCccccccCCC
Q 039565           66 MKSTNILLNE---KVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTELTEKSDVDSFEIVILEIITGILTVDLSFKG  142 (188)
Q Consensus        66 l~~~nill~~---~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~di~s~G~~l~~~~~g~~p~~~~~~~  142 (188)
                      |||+||+++.   ++.++|+|||++.....                  ..++.++|+||||+++|+|++|..||......
T Consensus       143 lkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~  204 (299)
T 3m2w_A          143 VKPENLLYTSKRPNAILKLTDFGFAKETTG------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL  204 (299)
T ss_dssp             CSGGGEEESSSSTTCCEEECCCTTCEECTT------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC----
T ss_pred             CCHHHEEEecCCCCCcEEEecccccccccc------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcch
Confidence            9999999998   78899999998864320                  12567899999999999999999998532110


Q ss_pred             ---------------CcC----HHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          143 ---------------EFD----IISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       143 ---------------~~~----~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                     ..+    ...+..+.+++..||+.+|++|||++++++
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~  256 (299)
T 3m2w_A          205 AISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  256 (299)
T ss_dssp             ---CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hhhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence                           111    124678999999999999999999999997

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.97  E-value=8.1e-31  Score=208.20  Aligned_cols=158  Identities=18%  Similarity=0.174  Sum_probs=125.3

Q ss_pred             CCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc----c---------cHHHHHHHHhcCCCCCcEEeCCCCCcEEE
Q 039565           11 GPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE----E---------VCCPGLEYLHQGLKHPIIQRDMKSTNILL   73 (188)
Q Consensus        11 Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~----~---------~i~~~l~~Lh~~~~~~i~h~dl~~~nill   73 (188)
                      |++|+++.+.   ....++||||++ ++|.+++ ...    .         |++.||.|||+ ...+|+||||||+||++
T Consensus       115 ~~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~-~~~~ivHrDlkp~NIll  192 (382)
T 2vx3_A          115 KYYIVHLKRHFMFRNHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT-PELSIIHCDLKPENILL  192 (382)
T ss_dssp             GGGBCCEEEEEEETTEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTS-TTTCEECCCCSGGGEEE
T ss_pred             ceeEEEeeeeeccCCceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhcc-CCCCEEcCCCCcccEEE
Confidence            4458888887   788999999997 5999998 221    1         99999999994 12789999999999999


Q ss_pred             c--cCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCCC--
Q 039565           74 N--EKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKGE--  143 (188)
Q Consensus        74 ~--~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~~--  143 (188)
                      +  .++.+||+|||+++....     ......|++.|+|||      ++.++|||||||++|+|++|..||......+  
T Consensus       193 ~~~~~~~~kL~DFG~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~  267 (382)
T 2vx3_A          193 CNPKRSAIKIVDFGSSCQLGQ-----RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQM  267 (382)
T ss_dssp             SSTTSCCEEECCCTTCEETTC-----CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred             ecCCCCcEEEEeccCceeccc-----ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            5  467899999999875431     123456888899998      6889999999999999999999886321100  


Q ss_pred             -------------------------------------------------------------------------cCHHHHH
Q 039565          144 -------------------------------------------------------------------------FDIISVE  150 (188)
Q Consensus       144 -------------------------------------------------------------------------~~~~~~~  150 (188)
                                                                                               .......
T Consensus       268 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (382)
T 2vx3_A          268 NKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYL  347 (382)
T ss_dssp             HHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHH
T ss_pred             HHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhH
Confidence                                                                                     0112335


Q ss_pred             HHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          151 KAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       151 ~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      .+.+++..||+.||++|||++++++
T Consensus       348 ~~~dli~~mL~~dP~~Rpta~e~L~  372 (382)
T 2vx3_A          348 KFKDLILRMLDYDPKTRIQPYYALQ  372 (382)
T ss_dssp             HHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             HHHHHHHHhcCCChhhCCCHHHHhc
Confidence            7899999999999999999999986

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.97  E-value=6.1e-31  Score=205.93  Aligned_cols=154  Identities=19%  Similarity=0.292  Sum_probs=123.5

Q ss_pred             Ceeeeccc---CCccEEEEecCCCCChhhhc-CCc----c---------cHHHHHHHHhcCCCCCcEEeCCCCCcEEE--
Q 039565           13 LLVELIGK---QKNNALELGFRGNPELVDQQ-GKE----E---------VCCPGLEYLHQGLKHPIIQRDMKSTNILL--   73 (188)
Q Consensus        13 niv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~----~---------~i~~~l~~Lh~~~~~~i~h~dl~~~nill--   73 (188)
                      +++.+.++   ....+++|||+. ++|.+++ ...    .         |++.||.|||+   .+++||||||+||++  
T Consensus        83 ~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~  158 (355)
T 2eu9_A           83 LCVLMSDWFNFHGHMCIAFELLG-KNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHE---NQLTHTDLKPENILFVN  158 (355)
T ss_dssp             CBCCEEEEEEETTEEEEEEECCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEESC
T ss_pred             eEEEeeeeeeeCCeEEEEEeccC-CChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEec
Confidence            37887776   788999999995 5676666 221    1         99999999999   999999999999999  


Q ss_pred             -----------------ccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHH
Q 039565           74 -----------------NEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEII  130 (188)
Q Consensus        74 -----------------~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~  130 (188)
                                       +.++.+||+|||++.....     ......|+..|+|||      ++.++|+||||+++|+|+
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~  233 (355)
T 2eu9_A          159 SEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHE-----HHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYY  233 (355)
T ss_dssp             CCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTS-----CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccCCCcEEEeecCccccccc-----cccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHH
Confidence                             5678999999999875321     123456888999998      688999999999999999


Q ss_pred             hCCccccccCCCC-------------------------------------------------------cCHHHHHHHHHH
Q 039565          131 TGILTVDLSFKGE-------------------------------------------------------FDIISVEKAVEI  155 (188)
Q Consensus       131 ~g~~p~~~~~~~~-------------------------------------------------------~~~~~~~~~~~l  155 (188)
                      +|..||......+                                                       ........+.++
T Consensus       234 ~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  313 (355)
T 2eu9_A          234 RGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDL  313 (355)
T ss_dssp             HSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHH
T ss_pred             hCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHH
Confidence            9999986432110                                                       011234578899


Q ss_pred             HHHccCcCCCCCCCHHHHHH
Q 039565          156 AMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       156 ~~~cl~~~p~~Rps~~~i~~  175 (188)
                      +..||+.||++|||++++++
T Consensus       314 i~~~L~~dP~~Rpt~~e~l~  333 (355)
T 2eu9_A          314 MRRMLEFDPAQRITLAEALL  333 (355)
T ss_dssp             HHHHTCSSTTTSCCHHHHTT
T ss_pred             HHHHhcCChhhCcCHHHHhc
Confidence            99999999999999999985

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.94  E-value=1e-27  Score=192.27  Aligned_cols=143  Identities=14%  Similarity=0.019  Sum_probs=111.9

Q ss_pred             ccEEEEecCCCCChhhhcC------Ccc-------------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEccCCceEEec
Q 039565           23 NNALELGFRGNPELVDQQG------KEE-------------VCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLAD   83 (188)
Q Consensus        23 ~~~lv~e~~~~~~L~~~~~------~~~-------------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~~~kl~d   83 (188)
                      ..+++|+.+ +++|.++++      ...             |++.||+|||+   .+|+||||||+||+++.++.+||+|
T Consensus       179 ~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~iiHrDiKp~NILl~~~~~~kL~D  254 (413)
T 3dzo_A          179 SRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGLVHTYLRPVDIVLDQRGGVFLTG  254 (413)
T ss_dssp             SEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECC
T ss_pred             ceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcccceEEEecCCeEEEEe
Confidence            345666655 478988882      111             99999999999   9999999999999999999999999


Q ss_pred             ccCcccccCCCCCcceeeecccccccCCCC----------------CCccchHHHHHHHHHHHhCCccccccCCCCc---
Q 039565           84 FGQSRISPVEGGTHMSTTIAGTAGFLNTEL----------------TEKSDVDSFEIVILEIITGILTVDLSFKGEF---  144 (188)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~----------------~~~~di~s~G~~l~~~~~g~~p~~~~~~~~~---  144 (188)
                      ||+++....     ......| +.|+|||.                +.++|||||||++|+|++|..||........   
T Consensus       255 FG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~  328 (413)
T 3dzo_A          255 FEHLVRDGA-----SAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEW  328 (413)
T ss_dssp             GGGCEETTE-----EECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGG
T ss_pred             ccceeecCC-----ccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHHH
Confidence            999875321     1334566 88999982                2489999999999999999999965422110   


Q ss_pred             ----CHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          145 ----DIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       145 ----~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                          ....+..+.+++..||+.+|++|||+.++++
T Consensus       329 ~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~  363 (413)
T 3dzo_A          329 IFRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAME  363 (413)
T ss_dssp             GGSSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHhhcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence                1134578999999999999999999877654

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.94  E-value=5e-27  Score=183.20  Aligned_cols=138  Identities=14%  Similarity=0.036  Sum_probs=110.1

Q ss_pred             CccEEEEecCCCCChhhhc-CC-cc---------cHHHHHHHHh-cCCCCCcEEeCCCCCcEEEccCC------------
Q 039565           22 KNNALELGFRGNPELVDQQ-GK-EE---------VCCPGLEYLH-QGLKHPIIQRDMKSTNILLNEKV------------   77 (188)
Q Consensus        22 ~~~~lv~e~~~~~~L~~~~-~~-~~---------~i~~~l~~Lh-~~~~~~i~h~dl~~~nill~~~~------------   77 (188)
                      ...++||||+++|++.+.+ +. ..         |++.||.||| +   .+|+||||||+||+++.++            
T Consensus       135 ~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~  211 (336)
T 2vuw_A          135 DQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEAS---LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKS  211 (336)
T ss_dssp             TCEEEEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHHHHHHHH---HCCBCSCCCGGGEEEEECSCSEEEEEETTEE
T ss_pred             CeEEEEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHh---CCEeECCCCHHHEEEeccCCcceeeeccCcc
Confidence            6789999999999766666 32 22         9999999999 8   9999999999999999887            


Q ss_pred             --------ceEEecccCcccccCCCCCcceeeecccccccCCC-----CCCccchHHHHHH-HHHHHhCCcccccc----
Q 039565           78 --------QAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-----LTEKSDVDSFEIV-ILEIITGILTVDLS----  139 (188)
Q Consensus        78 --------~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-----~~~~~di~s~G~~-l~~~~~g~~p~~~~----  139 (188)
                              .+||+|||+++....       ....||+.|+|||     .+.++||||++++ .+++++|..||...    
T Consensus       212 ~~~~~~~~~vkL~DFG~a~~~~~-------~~~~gt~~y~aPE~~~g~~~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~  284 (336)
T 2vuw_A          212 STIPSCGLQVSIIDYTLSRLERD-------GIVVFCDVSMDEDLFTGDGDYQFDIYRLMKKENNNRWGEYHPYSNVLWLH  284 (336)
T ss_dssp             EEEECTTEEEEECCCTTCBEEET-------TEEECCCCTTCSGGGCCCSSHHHHHHHHHHHHHTTCTTSCCTHHHHHHHH
T ss_pred             ccccCCCceEEEeeccccEecCC-------CcEEEeecccChhhhcCCCccceehhhhhCCCCcccccccCCCcchhhhh
Confidence                    899999999986431       1347899999999     3668999998766 67778898888531    


Q ss_pred             -----------CC----CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHH
Q 039565          140 -----------FK----GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVV  174 (188)
Q Consensus       140 -----------~~----~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~  174 (188)
                                 ..    .......+..+.+++..||+.+     |+++++
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l  329 (336)
T 2vuw_A          285 YLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLL  329 (336)
T ss_dssp             HHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHH
T ss_pred             HHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHHHH
Confidence                       11    1122357788999999999966     999888

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.93  E-value=1.9e-28  Score=203.56  Aligned_cols=123  Identities=15%  Similarity=0.127  Sum_probs=91.0

Q ss_pred             cccc-cCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc---------cHHHHHHHHhcCCCCCcEEeCCCCCcEE
Q 039565            6 RNKL-TGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE---------VCCPGLEYLHQGLKHPIIQRDMKSTNIL   72 (188)
Q Consensus         6 l~~l-~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~nil   72 (188)
                      |+++ .|+||++++++   +...||||||++|++|.+++.+.+         |++.||+|+|+   .+|+||||||+|||
T Consensus       295 l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~~~l~~~~I~~QIl~AL~ylH~---~GIIHRDIKPeNIL  371 (569)
T 4azs_A          295 LTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGEEIDREKILGSLLRSLAALEK---QGFWHDDVRPWNVM  371 (569)
T ss_dssp             HHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHH---TTCEESCCCGGGEE
T ss_pred             HHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHH---CCceeccCchHhEE
Confidence            4556 79999999999   788999999999999999993322         99999999999   99999999999999


Q ss_pred             EccCCceEEecccCcccccCCCCCcceeeecccccccCCC-----CCCccchHHHHHHHHHHHhCC
Q 039565           73 LNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-----LTEKSDVDSFEIVILEIITGI  133 (188)
Q Consensus        73 l~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-----~~~~~di~s~G~~l~~~~~g~  133 (188)
                      ++.+|.+||+|||+++.....  .....+..||+.|++||     ....+|+||+|+..+.+.++.
T Consensus       372 L~~dg~vKL~DFGlAr~~~~~--~~~~~t~vGTp~YmAPE~l~g~~~~~~d~~s~g~~~~~l~~~~  435 (569)
T 4azs_A          372 VDARQHARLIDFGSIVTTPQD--CSWPTNLVQSFFVFVNELFAENKSWNGFWRSAPVHPFNLPQPW  435 (569)
T ss_dssp             ECTTSCEEECCCTTEESCC-----CCSHHHHHHHHHHHHHHC-----------------CCCCTTH
T ss_pred             ECCCCCEEEeecccCeeCCCC--CccccCceechhhccHHHhCCCCCCcccccccccchhhhcccc
Confidence            999999999999999864321  12234567999999998     456799999999887765554

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.80  E-value=3.8e-21  Score=158.91  Aligned_cols=126  Identities=12%  Similarity=0.127  Sum_probs=101.2

Q ss_pred             cccccCCCee--eeccc-CCccEEEEecCCCCChhhhcCCcc----cHHHHHHHHhcCCCCCcEEeCCCCCcEEEccCCc
Q 039565            6 RNKLTGPLLV--ELIGK-QKNNALELGFRGNPELVDQQGKEE----VCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQ   78 (188)
Q Consensus         6 l~~l~Hpniv--~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~----~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~~   78 (188)
                      +++++||||+  ++++. .+..++||||+++++|.+++....    |++.||.|||+   .+|+||||||+||+++.  .
T Consensus       393 l~~l~h~nIv~~~~~~~~~~~~~lVmE~~~ggsL~~~l~~~~~i~~qi~~aL~~LH~---~gIiHrDiKp~NILl~~--~  467 (540)
T 3en9_A          393 LALVKDFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIEDNLDIAYKIGEIVGKLHK---NDVIHNDLTTSNFIFDK--D  467 (540)
T ss_dssp             HHHGGGGTCCCCCEEEEETTTTEEEEECCCSEEHHHHSTTCTHHHHHHHHHHHHHHH---TTEECTTCCTTSEEESS--S
T ss_pred             HHhcCCCCcCceEEEEEeCCccEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH---CcCccCCCCHHHEEECC--e
Confidence            5678999999  55666 788899999999999999995422    99999999999   99999999999999999  9


Q ss_pred             eEEecccCcccccCCCCCc-----ceeeecccccccCCC--------CCCccchHHHHHHHHHHHhCCccc
Q 039565           79 AKLADFGQSRISPVEGGTH-----MSTTIAGTAGFLNTE--------LTEKSDVDSFEIVILEIITGILTV  136 (188)
Q Consensus        79 ~kl~d~~~~~~~~~~~~~~-----~~~~~~~~~~~~~pe--------~~~~~di~s~G~~l~~~~~g~~p~  136 (188)
                      +||+|||+++.........     ......||+.|++||        ++..+|+||...-..+-+.++.++
T Consensus       468 ~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          468 LYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             EEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             EEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence            9999999998653111111     123568999999999        466789999887777766655444

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.53  E-value=6.3e-15  Score=112.38  Aligned_cols=71  Identities=18%  Similarity=0.186  Sum_probs=60.7

Q ss_pred             eeeccc--CCccEEEEecCCCCChhhhcCCcc------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEccCCceEEecccC
Q 039565           15 VELIGK--QKNNALELGFRGNPELVDQQGKEE------VCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQ   86 (188)
Q Consensus        15 v~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~   86 (188)
                      +++.++  .+..++||||+++++|.+ +....      |++.||.|||+   .+++|||+||+||+++ ++.++|+|||+
T Consensus       164 ~~v~~~~~~~~~~lvmE~~~g~~L~~-l~~~~~~~i~~qi~~~l~~lH~---~giiHrDlkp~NILl~-~~~vkl~DFG~  238 (282)
T 1zar_A          164 LAVPKVYAWEGNAVLMELIDAKELYR-VRVENPDEVLDMILEEVAKFYH---RGIVHGDLSQYNVLVS-EEGIWIIDFPQ  238 (282)
T ss_dssp             SSSCCEEEEETTEEEEECCCCEEGGG-CCCSCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEE-TTEEEECCCTT
T ss_pred             CCcCeEEeccceEEEEEecCCCcHHH-cchhhHHHHHHHHHHHHHHHHH---CCCEeCCCCHHHEEEE-CCcEEEEECCC
Confidence            455555  566799999999999999 52222      99999999999   9999999999999999 99999999999


Q ss_pred             cccc
Q 039565           87 SRIS   90 (188)
Q Consensus        87 ~~~~   90 (188)
                      ++..
T Consensus       239 a~~~  242 (282)
T 1zar_A          239 SVEV  242 (282)
T ss_dssp             CEET
T ss_pred             CeEC
Confidence            8753

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.31  E-value=1e-12  Score=98.78  Aligned_cols=79  Identities=16%  Similarity=0.225  Sum_probs=60.5

Q ss_pred             cccccCCCe--eeecccCCccEEEEecCCC-C----ChhhhcCCc---c------cHHHHHHHHh-cCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLL--VELIGKQKNNALELGFRGN-P----ELVDQQGKE---E------VCCPGLEYLH-QGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpni--v~~~~~~~~~~lv~e~~~~-~----~L~~~~~~~---~------~i~~~l~~Lh-~~~~~~i~h~dl~~   68 (188)
                      |.+++|+++  +++++ ....++||||+.+ |    +|.++....   .      |++.||.||| +   .+++|||+||
T Consensus       124 l~~l~~~~i~~p~~~~-~~~~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~givHrDlkp  199 (258)
T 1zth_A          124 LERAKEAGVSVPQPYT-YMKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQE---AELVHADLSE  199 (258)
T ss_dssp             HHHHHHTTCCCCCEEE-EETTEEEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHHHHHHHHHT---SCEECSSCST
T ss_pred             HHHHHhCCCCCCeEEE-cCCCEEEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCH
Confidence            455666653  22332 3467899999942 3    777766221   1      9999999999 8   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccc
Q 039565           69 TNILLNEKVQAKLADFGQSRIS   90 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~   90 (188)
                      .||+++.  .++|+|||++...
T Consensus       200 ~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          200 YNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             TSEEESS--SEEECCCTTCEET
T ss_pred             HHEEEcC--cEEEEECcccccC
Confidence            9999998  8999999998753

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.07  E-value=3e-11  Score=95.55  Aligned_cols=76  Identities=16%  Similarity=0.180  Sum_probs=59.8

Q ss_pred             CCCeeeeccc---------CCccEEEEecCCCCChhhhcCCcc------cHHHHHHHHhcCCCCCcEEeCCCCCcEEEcc
Q 039565           11 GPLLVELIGK---------QKNNALELGFRGNPELVDQQGKEE------VCCPGLEYLHQGLKHPIIQRDMKSTNILLNE   75 (188)
Q Consensus        11 Hpniv~~~~~---------~~~~~lv~e~~~~~~L~~~~~~~~------~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~   75 (188)
                      |+|+.+++..         ....++||||+++++|..+.....      |++.+|.+||.   .+++||||||.|||++.
T Consensus       164 ~~nL~rL~~~gv~vp~p~~~~~~~LVME~i~G~~L~~l~~~~~~~~l~~qll~~l~~lH~---~gIVHrDLKp~NILl~~  240 (397)
T 4gyi_A          164 FAFMKALYEEGFPVPEPIAQSRHTIVMSLVDALPMRQVSSVPDPASLYADLIALILRLAK---HGLIHGDFNEFNILIRE  240 (397)
T ss_dssp             HHHHHHHHHTTCSCCCEEEEETTEEEEECCSCEEGGGCCCCSCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEEE
T ss_pred             HHHHHHHHhcCCCCCeeeeccCceEEEEecCCccHhhhcccHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeC
Confidence            6666666433         234579999999989887663222      99999999999   99999999999999987


Q ss_pred             CC----------ceEEecccCccc
Q 039565           76 KV----------QAKLADFGQSRI   89 (188)
Q Consensus        76 ~~----------~~kl~d~~~~~~   89 (188)
                      ++          .+.+.||+-+..
T Consensus       241 dgd~~d~~~~~~~~~iID~~Q~V~  264 (397)
T 4gyi_A          241 EKDAEDPSSITLTPIIIXFPQMVS  264 (397)
T ss_dssp             EECSSCTTSEEEEEEECCCTTCEE
T ss_pred             CCCcccccccccceEEEEeCCccc
Confidence            76          378999986653

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=98.31  E-value=7.7e-07  Score=66.33  Aligned_cols=78  Identities=10%  Similarity=0.122  Sum_probs=59.9

Q ss_pred             CCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc------cHHHHHHHHhcC------------------------
Q 039565           11 GPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE------VCCPGLEYLHQG------------------------   56 (188)
Q Consensus        11 Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~------~i~~~l~~Lh~~------------------------   56 (188)
                      +.++++++++   ....+++||+++|.+|.+.+ ....      +++.++..||+-                        
T Consensus        69 ~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (263)
T 3tm0_A           69 KLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYEDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNN  148 (263)
T ss_dssp             TSCCCCEEEEEEETTEEEEEEECCSSEEHHHHCCTTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHT
T ss_pred             CCCCCeEEEEEecCCceEEEEEecCCeehhhccCCcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhc
Confidence            4567777766   66789999999999998875 1111      888999999971                        


Q ss_pred             --------------------------------CCCCcEEeCCCCCcEEEccCCceEEecccCcc
Q 039565           57 --------------------------------LKHPIIQRDMKSTNILLNEKVQAKLADFGQSR   88 (188)
Q Consensus        57 --------------------------------~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~   88 (188)
                                                      ....++|+|+++.||+++.+....+.||+.+.
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T 3tm0_A          149 DLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             TCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred             cccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence                                            01458999999999999876566799998664

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.22  E-value=1.3e-06  Score=64.66  Aligned_cols=74  Identities=15%  Similarity=0.147  Sum_probs=54.5

Q ss_pred             eeeeccc---CCccEEEEecCCCCChhhhcCCc-----ccHHHHHHHHhcCC----------------------------
Q 039565           14 LVELIGK---QKNNALELGFRGNPELVDQQGKE-----EVCCPGLEYLHQGL----------------------------   57 (188)
Q Consensus        14 iv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~-----~~i~~~l~~Lh~~~----------------------------   57 (188)
                      +.++++.   ++..+++|||+++.+|. +-...     .+++..+..||+..                            
T Consensus        77 vP~~~~~~~~~~~~~~v~e~i~G~~l~-~~~~~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (264)
T 1nd4_A           77 CAAVLDVVTEAGRDWLLLGEVPGQDLL-SSHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQ  155 (264)
T ss_dssp             BCCEEEEEECSSCEEEEEECCSSEETT-TSCCCHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCT
T ss_pred             CCeEEEeccCCCCCEEEEEecCCcccC-cCcCCHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccc
Confidence            4556666   55679999999998885 22111     17788888888621                            


Q ss_pred             ---------------------------CCCcEEeCCCCCcEEEccCCceEEecccCcc
Q 039565           58 ---------------------------KHPIIQRDMKSTNILLNEKVQAKLADFGQSR   88 (188)
Q Consensus        58 ---------------------------~~~i~h~dl~~~nill~~~~~~kl~d~~~~~   88 (188)
                                                 ..+++|+|++|.||+++.++..++.||+.+.
T Consensus       156 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~  213 (264)
T 1nd4_A          156 DDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG  213 (264)
T ss_dssp             TSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             hhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence                                       0129999999999999877667799998765

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=97.76  E-value=3.9e-05  Score=59.80  Aligned_cols=78  Identities=13%  Similarity=0.125  Sum_probs=56.5

Q ss_pred             CCeeeeccc---C---CccEEEEecCCCCChhhh-cCCc---------ccHHHHHHHHhcCC------------------
Q 039565           12 PLLVELIGK---Q---KNNALELGFRGNPELVDQ-QGKE---------EVCCPGLEYLHQGL------------------   57 (188)
Q Consensus        12 pniv~~~~~---~---~~~~lv~e~~~~~~L~~~-~~~~---------~~i~~~l~~Lh~~~------------------   57 (188)
                      .++++++..   .   ...++||||+++.++.+. +...         .+++.+|+.||...                  
T Consensus        98 vpvP~~~~~~~~~~~~g~~~~vme~v~G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~  177 (359)
T 3dxp_A           98 VPVAKMYALCEDESVIGRAFYIMEFVSGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQR  177 (359)
T ss_dssp             SCCCCEEEEECCTTTTSSCEEEEECCCCBCCCCTTCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHH
T ss_pred             CCCCcEEEECCCCCccCCeEEEEEecCCeecCCCccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHH
Confidence            446666666   2   347899999998877532 2221         17889999999621                  


Q ss_pred             -------------------------------------CCCcEEeCCCCCcEEEccCCc--eEEecccCccc
Q 039565           58 -------------------------------------KHPIIQRDMKSTNILLNEKVQ--AKLADFGQSRI   89 (188)
Q Consensus        58 -------------------------------------~~~i~h~dl~~~nill~~~~~--~kl~d~~~~~~   89 (188)
                                                           ...++|+|+++.||+++.++.  +.+.||+.+..
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          178 QIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             HHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             HHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence                                                 256899999999999987653  68999998763

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=97.53  E-value=4.5e-05  Score=58.06  Aligned_cols=78  Identities=22%  Similarity=0.282  Sum_probs=46.1

Q ss_pred             CCcEEeCCCCCcEEEcc--CCceEEecccCcccccCC-------CC---C--cceeeecccccccC-CCC----CCccch
Q 039565           59 HPIIQRDMKSTNILLNE--KVQAKLADFGQSRISPVE-------GG---T--HMSTTIAGTAGFLN-TEL----TEKSDV  119 (188)
Q Consensus        59 ~~i~h~dl~~~nill~~--~~~~kl~d~~~~~~~~~~-------~~---~--~~~~~~~~~~~~~~-pe~----~~~~di  119 (188)
                      ..++|+|+++.||+++.  ...+.+.||+.+......       ..   .  .....+........ |+.    .-..+.
T Consensus       191 ~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~~~~~~~~r~~~~~~~  270 (304)
T 3sg8_A          191 PCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKDIPTVLEKYRMKEKY  270 (304)
T ss_dssp             CEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCSCHHHHHHHHHHHHHH
T ss_pred             ceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCCCcHHHHHHHHHHHHH
Confidence            35799999999999998  456789999877542100       00   0  00000000001111 111    112578


Q ss_pred             HHHHHHHHHHHhCCccc
Q 039565          120 DSFEIVILEIITGILTV  136 (188)
Q Consensus       120 ~s~G~~l~~~~~g~~p~  136 (188)
                      |+++.++|.+.+|..++
T Consensus       271 ~~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          271 WSFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             HHHHHHHHHHHTTCHHH
T ss_pred             HHHHHHHHHHHcCCHHH
Confidence            99999999999998665

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=96.55  E-value=0.0032  Score=46.66  Aligned_cols=29  Identities=17%  Similarity=0.286  Sum_probs=25.1

Q ss_pred             CcEEeCCCCCcEEEccCCceEEecccCcc
Q 039565           60 PIIQRDMKSTNILLNEKVQAKLADFGQSR   88 (188)
Q Consensus        60 ~i~h~dl~~~nill~~~~~~kl~d~~~~~   88 (188)
                      .++|+|+.+.||+++.++...|.||+.+.
T Consensus       194 ~l~HGDl~~~Nil~~~~~~~~viDwe~a~  222 (272)
T 4gkh_A          194 VVTHGDFSLDNLIFDEGKLIGCIDVGRVG  222 (272)
T ss_dssp             EEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             EEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence            37899999999999987777899998765

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=95.76  E-value=0.014  Score=44.37  Aligned_cols=31  Identities=26%  Similarity=0.489  Sum_probs=24.9

Q ss_pred             CCcEEeCCCCCcEEEcc---CCc-eEEecccCccc
Q 039565           59 HPIIQRDMKSTNILLNE---KVQ-AKLADFGQSRI   89 (188)
Q Consensus        59 ~~i~h~dl~~~nill~~---~~~-~kl~d~~~~~~   89 (188)
                      ..++|+|+.+.|++++.   ++. ..+.||+.+..
T Consensus       190 ~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          190 PRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             CEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             CeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence            35699999999999987   355 48999987653

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=94.28  E-value=0.038  Score=42.04  Aligned_cols=31  Identities=23%  Similarity=0.275  Sum_probs=27.5

Q ss_pred             CCCcEEeCCCCCcEEEccCCceEEecccCcc
Q 039565           58 KHPIIQRDMKSTNILLNEKVQAKLADFGQSR   88 (188)
Q Consensus        58 ~~~i~h~dl~~~nill~~~~~~kl~d~~~~~   88 (188)
                      ...++|+|+++.||+++.++.+.+.||+.+.
T Consensus       221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~  251 (346)
T 2q83_A          221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVS  251 (346)
T ss_dssp             SCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred             cCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence            3789999999999999877889999998764

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=92.32  E-value=0.058  Score=42.75  Aligned_cols=30  Identities=13%  Similarity=0.293  Sum_probs=26.4

Q ss_pred             CCcEEeCCCCCcEEEccCCceEEecccCccc
Q 039565           59 HPIIQRDMKSTNILLNEKVQAKLADFGQSRI   89 (188)
Q Consensus        59 ~~i~h~dl~~~nill~~~~~~kl~d~~~~~~   89 (188)
                      ..++|+|+++.||+++.++ +.+.||+.+..
T Consensus       232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~  261 (420)
T 2pyw_A          232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFY  261 (420)
T ss_dssp             CEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred             CeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence            6799999999999998776 99999987653

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=91.08  E-value=0.72  Score=33.44  Aligned_cols=115  Identities=13%  Similarity=0.089  Sum_probs=62.0

Q ss_pred             cHHHHHHHHhcCCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCCC-----CCccch
Q 039565           45 VCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTEL-----TEKSDV  119 (188)
Q Consensus        45 ~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~-----~~~~di  119 (188)
                      |.+.+|.-+-..  ..-..+=..|..|++..+|.+.+.+ ..+.         ...     ..+.+|+.     +.+.-|
T Consensus        57 Qc~~~L~~~~~~--~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~---------~~~-----~~~~~pe~~~~~~te~~~I  119 (229)
T 2yle_A           57 QCCGSLRAAARR--RQPRHRVRSAAQIRVWRDGAVTLAP-AADD---------AGE-----PPPVAGKLGYSQCMETEVI  119 (229)
T ss_dssp             HHHHHHHHHHHT--TCCCCCCCSGGGEEEETTSCEEECC-C--------------------------CCSSSSSCHHHHH
T ss_pred             HHHHHHHhhhhc--ccCCceecCCcceEEecCCceeccc-cccc---------ccc-----cCCCChhhccccchHHHHH
Confidence            666666554210  0111122345788888888877653 1110         000     11234443     567779


Q ss_pred             HHHHHHHHHHHhCCccccccCCCCcCHHHHHHHHHHHHHccCc-------------------------CCCCCCCHHHHH
Q 039565          120 DSFEIVILEIITGILTVDLSFKGEFDIISVEKAVEIAMASVSS-------------------------KVNRRPLMNQVV  174 (188)
Q Consensus       120 ~s~G~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~l~~~cl~~-------------------------~p~~Rps~~~i~  174 (188)
                      +|+|+++|.-+.-..|-+..      ...++.+-+++..|...                         .+..|++.++|+
T Consensus       120 ysLG~tLY~ALDygL~e~eE------~eLS~~LE~LL~~Mt~~~~d~~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi  193 (229)
T 2yle_A          120 ESLGIIIYKALDYGLKENEE------RELSPPLEQLIDHMANTVEADGSNDEGYEAAEEGLGDEDEKRKISAIRSYRDVM  193 (229)
T ss_dssp             HHHHHHHHHHHTTTCCTTEE------ECCCHHHHHHHHHHTTCCC--------------------CCSCCCCCCSHHHHH
T ss_pred             HHHHHHHHHHhhcCCCcccc------hhhCHHHHHHHHHHHhcccccccccccccccccccccccccccccCcCCHHHHH
Confidence            99999999987654443322      22334444555555433                         346889999999


Q ss_pred             HHHhhccC
Q 039565          175 MVREQGSG  182 (188)
Q Consensus       175 ~~l~~~~~  182 (188)
                      +..+.-..
T Consensus       194 ~~C~~hl~  201 (229)
T 2yle_A          194 KLCAAHLP  201 (229)
T ss_dssp             HHHHTTSS
T ss_pred             HHHHhhcc
Confidence            88765544

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=90.69  E-value=0.079  Score=40.09  Aligned_cols=30  Identities=20%  Similarity=0.235  Sum_probs=25.6

Q ss_pred             CCcEEeCCCCCcEEEccCCceEEecccCcc
Q 039565           59 HPIIQRDMKSTNILLNEKVQAKLADFGQSR   88 (188)
Q Consensus        59 ~~i~h~dl~~~nill~~~~~~kl~d~~~~~   88 (188)
                      .+++|+|+.+.||+++.+....+.||+.+.
T Consensus       187 ~~liHgDl~~~Nil~~~~~~~~lIDf~~a~  216 (322)
T 2ppq_A          187 AGVIHADLFQDNVFFLGDELSGLIDFYFAC  216 (322)
T ss_dssp             EEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             cccCCCCCCccCEEEeCCceEEEecchhcc
Confidence            478999999999999887666899998664

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=90.43  E-value=0.093  Score=40.36  Aligned_cols=30  Identities=13%  Similarity=0.199  Sum_probs=25.4

Q ss_pred             CCcEEeCCCCCcEEEccCCceEEecccCcc
Q 039565           59 HPIIQRDMKSTNILLNEKVQAKLADFGQSR   88 (188)
Q Consensus        59 ~~i~h~dl~~~nill~~~~~~kl~d~~~~~   88 (188)
                      ..++|+|+.+.||+++++..+.+.||+.+.
T Consensus       222 ~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~  251 (357)
T 3ats_A          222 PVLLWGDARVGNVLYRDFQPVAVLDWEMVA  251 (357)
T ss_dssp             CEEECSSCSGGGEEEETTEEEEECCGGGCE
T ss_pred             ceEEeCCCCCCeEEEeCCcEEEEEcccccc
Confidence            678999999999999964457899998765

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=89.89  E-value=0.13  Score=39.22  Aligned_cols=31  Identities=19%  Similarity=0.456  Sum_probs=26.5

Q ss_pred             CCcEEeCCCCCcEEEccC----CceEEecccCccc
Q 039565           59 HPIIQRDMKSTNILLNEK----VQAKLADFGQSRI   89 (188)
Q Consensus        59 ~~i~h~dl~~~nill~~~----~~~kl~d~~~~~~   89 (188)
                      ..++|+|+.+.||+++.+    +.+.+.||+.+..
T Consensus       183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~  217 (333)
T 3csv_A          183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL  217 (333)
T ss_dssp             CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred             CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence            578999999999999874    6789999987754

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=86.73  E-value=0.26  Score=37.33  Aligned_cols=28  Identities=21%  Similarity=0.312  Sum_probs=24.2

Q ss_pred             CCcEEeCCCCCcEEEccCCceEEecccCcc
Q 039565           59 HPIIQRDMKSTNILLNEKVQAKLADFGQSR   88 (188)
Q Consensus        59 ~~i~h~dl~~~nill~~~~~~kl~d~~~~~   88 (188)
                      ..++|+|+++.||+++ + .+.+.||+.+.
T Consensus       195 ~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~  222 (328)
T 1zyl_A          195 VLRLHGDCHAGNILWR-D-GPMFVDLDDAR  222 (328)
T ss_dssp             CEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred             eeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence            5689999999999999 4 88999997665

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=86.32  E-value=0.32  Score=37.97  Aligned_cols=29  Identities=21%  Similarity=0.331  Sum_probs=24.8

Q ss_pred             CCcEEeCCCCCcEEEccCCceEEecccCcc
Q 039565           59 HPIIQRDMKSTNILLNEKVQAKLADFGQSR   88 (188)
Q Consensus        59 ~~i~h~dl~~~nill~~~~~~kl~d~~~~~   88 (188)
                      ..++|+|+.+.||+++.+ .+.+.||..+.
T Consensus       227 ~~L~HGDl~~~Nil~~~~-~~~lID~e~a~  255 (397)
T 2olc_A          227 ETLIHGDLHTGSIFASEH-ETKVIDPEFAF  255 (397)
T ss_dssp             CEEECSCCSGGGEEECSS-CEEECCCTTCE
T ss_pred             CceeeCCCCcCcEEEeCC-CeEEEeCcccc
Confidence            678999999999999876 48899997665

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=85.98  E-value=0.26  Score=37.80  Aligned_cols=30  Identities=13%  Similarity=0.312  Sum_probs=26.5

Q ss_pred             CCcEEeCCCCCcEEEccCCceEEecccCcc
Q 039565           59 HPIIQRDMKSTNILLNEKVQAKLADFGQSR   88 (188)
Q Consensus        59 ~~i~h~dl~~~nill~~~~~~kl~d~~~~~   88 (188)
                      ..++|+|+.+.|++++.++.+.+.||+.+.
T Consensus       206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~  235 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPM  235 (339)
T ss_dssp             CEEECSCCCGGGEEECGGGCEEECCCSSCE
T ss_pred             ceeEeCCCCcCCEEEeCCCeEEEEECCCCe
Confidence            578999999999999987889999997665

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=85.14  E-value=0.35  Score=37.37  Aligned_cols=29  Identities=28%  Similarity=0.397  Sum_probs=23.6

Q ss_pred             CCcEEeCCCCCcEEEccCCceEEecccCcc
Q 039565           59 HPIIQRDMKSTNILLNEKVQAKLADFGQSR   88 (188)
Q Consensus        59 ~~i~h~dl~~~nill~~~~~~kl~d~~~~~   88 (188)
                      ..++|+|+.+.||+++.++ +.+.||..+.
T Consensus       212 ~~l~HgDl~~~Nil~~~~~-~~lID~e~a~  240 (369)
T 3c5i_A          212 IVFCHNDLQENNIINTNKC-LRLIDFEYSG  240 (369)
T ss_dssp             EEEECSCCCGGGEEECC-C-EEECCCTTCE
T ss_pred             eEEEeCCCCcccEEecCCc-EEEEEecCCC
Confidence            4689999999999998654 8899997665

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=84.86  E-value=0.4  Score=35.90  Aligned_cols=29  Identities=17%  Similarity=0.126  Sum_probs=24.2

Q ss_pred             CCcEEeCCCCCcEEEccCCceEEecccCcc
Q 039565           59 HPIIQRDMKSTNILLNEKVQAKLADFGQSR   88 (188)
Q Consensus        59 ~~i~h~dl~~~nill~~~~~~kl~d~~~~~   88 (188)
                      ..++|+|+.+.|++ ..++.+.+.||..+.
T Consensus       173 ~~l~HgDl~~~Nil-~~~~~~~lID~e~a~  201 (301)
T 3dxq_A          173 LAACHCDPLCENFL-DTGERMWIVDWEYSG  201 (301)
T ss_dssp             CEEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred             ceeeccCCCcCCEE-ECCCCEEEEeccccc
Confidence            45899999999999 556678999998765

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=81.13  E-value=0.62  Score=37.04  Aligned_cols=18  Identities=28%  Similarity=0.433  Sum_probs=15.2

Q ss_pred             CCcEEeCCCCCcEEEccC
Q 039565           59 HPIIQRDMKSTNILLNEK   76 (188)
Q Consensus        59 ~~i~h~dl~~~nill~~~   76 (188)
                      ..++|+|+.+.||+++.+
T Consensus       249 ~v~~H~Dl~~gNiL~~~~  266 (429)
T 1nw1_A          249 VTFCHNDLQEGNILLPKA  266 (429)
T ss_dssp             EEEECSCCCGGGEEEEC-
T ss_pred             eEEEeCCCCCCeEEeeCC
Confidence            357999999999999875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	188
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	4e-21
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	1e-17
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-17
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	3e-17
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	3e-17
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	5e-17
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	1e-16
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-16
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	3e-16
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	4e-16
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	4e-16
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	5e-16
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	4e-15
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	4e-15
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	5e-15
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	5e-15
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	6e-15
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-14
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-14
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	5e-14
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	6e-14
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	7e-14
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	9e-14
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	1e-13
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	3e-13
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	4e-13
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	4e-13
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-12
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	3e-12
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	5e-12
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	9e-12
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	1e-11
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	2e-11
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	2e-11
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	4e-11
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	6e-11
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-10
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	2e-10
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	2e-10
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	4e-10
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	5e-10
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	1e-09
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-09
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-09
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	2e-09
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	3e-09
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	5e-09
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	6e-09
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-08
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	3e-08
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	3e-08
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	9e-08
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-07
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-07
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	5e-07
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-06
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	1e-06
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	1e-06
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	2e-06
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	1e-05
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	4e-05
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	8e-05

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.8 bits (212), Expect = 4e-21
 Identities = 38/160 (23%), Positives = 67/160 (41%), Gaps = 29/160 (18%)

Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGT 105
              G++YLH      II RD+KS NI L+E +  K+ DFG + +     G+H    ++G+
Sbjct: 113 TAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 169

Query: 106 AGFLNTE---------LTEKSDVDSFEIVILEIITG---------------ILTVDLSFK 141
             ++  E          + +SDV +F IV+ E++TG               ++       
Sbjct: 170 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 229

Query: 142 GEFDIIS--VEKAVEIAMASVSSKVNRRPLMNQVVMVREQ 179
               + S   +    +    +  K + RPL  Q++   E 
Sbjct: 230 DLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIEL 269

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.8 bits (186), Expect = 1e-17
 Identities = 30/152 (19%), Positives = 59/152 (38%), Gaps = 23/152 (15%)

Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGT 105
              G+ ++ +      I RD+++ NIL+++ +  K+ADFG +R+   +            
Sbjct: 118 IAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFP 173

Query: 106 AGFL------NTELTEKSDVDSFEIVILEIITG-------------ILTVDLSFKGEFDI 146
             +           T KSDV SF I++ EI+T              I  ++  ++     
Sbjct: 174 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 233

Query: 147 ISVEKAVEIAMASVSSKVNRRPLMNQVVMVRE 178
              E+  ++       +   RP  + +  V E
Sbjct: 234 NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.9 bits (186), Expect = 2e-17
 Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 12/90 (13%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL YL +  KH I+ RD+K +NIL+N + + KL DFG S          M+ +  GT  +
Sbjct: 116 GLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----DSMANSFVGTRSY 169

Query: 109 LNTEL------TEKSDVDSFEIVILEIITG 132
           ++ E       + +SD+ S  + ++E+  G
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.0 bits (184), Expect = 3e-17
 Identities = 30/149 (20%), Positives = 53/149 (35%), Gaps = 25/149 (16%)

Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILLN-EKVQAKLADFGQSRISPVEGGTHMSTTIAG 104
              GL++LH     PII RD+K  NI +       K+ D G + +         +  + G
Sbjct: 121 ILKGLQFLHT-RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR----ASFAKAVIG 175

Query: 105 TAGF-----LNTELTEKSDVDSFEIVILEIITGIL--------------TVDLSFKGEFD 145
           T  F        +  E  DV +F + +LE+ T                          FD
Sbjct: 176 TPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFD 235

Query: 146 IISVEKAVEIAMASVSSKVNRRPLMNQVV 174
            +++ +  EI    +    + R  +  ++
Sbjct: 236 KVAIPEVKEIIEGCIRQNKDERYSIKDLL 264

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.1 bits (184), Expect = 3e-17
 Identities = 29/148 (19%), Positives = 54/148 (36%), Gaps = 23/148 (15%)

Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGT 105
              G+ Y+ +      + RD+++ NIL+ E +  K+ADFG +R+   +            
Sbjct: 122 IASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIE-DNEYTARQGAKFP 177

Query: 106 AGF------LNTELTEKSDVDSFEIVILEIITG-------------ILTVDLSFKGEFDI 146
             +      L    T KSDV SF I++ E+ T              +  V+  ++     
Sbjct: 178 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 237

Query: 147 ISVEKAVEIAMASVSSKVNRRPLMNQVV 174
              E   ++       +   RP    + 
Sbjct: 238 ECPESLHDLMCQCWRKEPEERPTFEYLQ 265

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 74.9 bits (183), Expect = 5e-17
 Identities = 28/150 (18%), Positives = 50/150 (33%), Gaps = 22/150 (14%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           G+ YL +      + RD+ + N L+ E +  K+ADFG SR              A    +
Sbjct: 152 GMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRW 208

Query: 109 ------LNTELTEKSDVDSFEIVILEIITGIL----------TVDLSFKGEFDIIS---V 149
                      T +SDV ++ +V+ EI +  L           +     G          
Sbjct: 209 MPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCP 268

Query: 150 EKAVEIAMASVSSKVNRRPLMNQVVMVREQ 179
            +   +     S     RP    +  + ++
Sbjct: 269 LELYNLMRLCWSKLPADRPSFCSIHRILQR 298

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.5 bits (180), Expect = 1e-16
 Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 10/98 (10%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
             G+ YLH      I  RD+K  N+LL+E+   K++DFG + +        +   + GT 
Sbjct: 113 MAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 169

Query: 107 GFLNTEL-------TEKSDVDSFEIVILEIITGILTVD 137
            ++  EL        E  DV S  IV+  ++ G L  D
Sbjct: 170 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 207

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 73.2 bits (179), Expect = 2e-16
 Identities = 31/153 (20%), Positives = 59/153 (38%), Gaps = 25/153 (16%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAG- 107
           G++YL        + RD+ + NIL+N  +  K++DFG SR    +      T+  G    
Sbjct: 140 GMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIP 196

Query: 108 --------FLNTELTEKSDVDSFEIVILEIITG-------------ILTVDLSFKGEFDI 146
                       + T  SDV S+ IV+ E+++              I  ++  ++    +
Sbjct: 197 IRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPM 256

Query: 147 ISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQ 179
                  ++ +       N RP   Q+V   ++
Sbjct: 257 DCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDK 289

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.5 bits (177), Expect = 3e-16
 Identities = 27/146 (18%), Positives = 50/146 (34%), Gaps = 23/146 (15%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAG- 107
           G+E+L        + RD+ + N+L+      K+ DFG +R    +    +          
Sbjct: 176 GMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKW 232

Query: 108 -----FLNTELTEKSDVDSFEIVILEIITG--------------ILTVDLSFKGEFDIIS 148
                      T KSDV S+ I++ EI +                  +   FK +    +
Sbjct: 233 MAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYA 292

Query: 149 VEKAVEIAMASVSSKVNRRPLMNQVV 174
            E+   I  +  +    +RP    + 
Sbjct: 293 TEEIYIIMQSCWAFDSRKRPSFPNLT 318

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.6 bits (175), Expect = 4e-16
 Identities = 29/148 (19%), Positives = 55/148 (37%), Gaps = 23/148 (15%)

Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGT 105
            C  +EYL        + RD+ + N L+N++   K++DFG SR    +     S      
Sbjct: 109 VCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFP 164

Query: 106 AGFLNTE------LTEKSDVDSFEIVILEIITG-------------ILTVDLSFKGEFDI 146
             +   E       + KSD+ +F +++ EI +                 +    +     
Sbjct: 165 VRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPH 224

Query: 147 ISVEKAVEIAMASVSSKVNRRPLMNQVV 174
           ++ EK   I  +    K + RP    ++
Sbjct: 225 LASEKVYTIMYSCWHEKADERPTFKILL 252

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.9 bits (176), Expect = 4e-16
 Identities = 34/146 (23%), Positives = 62/146 (42%), Gaps = 22/146 (15%)

Query: 49  GLEYLHQ--GLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
            L+  H+     H ++ RD+K  N+ L+ K   KL DFG +RI  +   T  +    GT 
Sbjct: 121 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI--LNHDTSFAKAFVGTP 178

Query: 107 GFLNTEL------TEKSDVDSFEIVILEIITGIL---------TVDLSFKGEFDIISV-- 149
            +++ E        EKSD+ S   ++ E+   +                +G+F  I    
Sbjct: 179 YYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRY 238

Query: 150 -EKAVEIAMASVSSKVNRRPLMNQVV 174
            ++  EI    ++ K   RP + +++
Sbjct: 239 SDELNEIITRMLNLKDYHRPSVEEIL 264

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.8 bits (175), Expect = 5e-16
 Identities = 34/190 (17%), Positives = 65/190 (34%), Gaps = 29/190 (15%)

Query: 11  GPLLVELIGKQKNNALELGFRGNPELVDQQGKEEVCCP------GLEYLHQGLKHPIIQR 64
              L   +  ++N  +           D    E + C       G+E+L        I R
Sbjct: 102 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHR 158

Query: 65  DMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAG------FLNTELTEKSD 118
           D+ + NILL+EK   K+ DFG +R    +                      +   T +SD
Sbjct: 159 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSD 218

Query: 119 VDSFEIVILEIITGILTVDLSFKGEFDIISV--------------EKAVEIAMASVSSKV 164
           V SF +++ EI +   +     K + +                   +  +  +     + 
Sbjct: 219 VWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEP 278

Query: 165 NRRPLMNQVV 174
           ++RP  +++V
Sbjct: 279 SQRPTFSELV 288

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.8 bits (170), Expect = 4e-15
 Identities = 24/147 (16%), Positives = 53/147 (36%), Gaps = 22/147 (14%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
             G+ YL       ++ RD+ + N+L+      K+ DFG +++   E   + +       
Sbjct: 121 AKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 177

Query: 107 GFLNTE------LTEKSDVDSFEIVILEIITG-------------ILTVDLSFKGEFDII 147
            ++  E       T +SDV S+ + + E++T                 ++   +     I
Sbjct: 178 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 237

Query: 148 SVEKAVEIAMASVSSKVNRRPLMNQVV 174
                  I +       + RP   +++
Sbjct: 238 CTIDVYMIMVKCWMIDADSRPKFRELI 264

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.3 bits (169), Expect = 4e-15
 Identities = 27/149 (18%), Positives = 57/149 (38%), Gaps = 20/149 (13%)

Query: 45  VCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAG 104
           +C    E +    +  +I RD+ + N L+ E    K++DFG +R    +     ST    
Sbjct: 106 MCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKF 164

Query: 105 TAGFLNTE------LTEKSDVDSFEIVILEIITG-------------ILTVDLSFKGEFD 145
              + + E       + KSDV SF +++ E+ +              +  +   F+    
Sbjct: 165 PVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKP 224

Query: 146 IISVEKAVEIAMASVSSKVNRRPLMNQVV 174
            ++     +I       +   RP  ++++
Sbjct: 225 RLASTHVYQIMNHCWKERPEDRPAFSRLL 253

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.4 bits (169), Expect = 5e-15
 Identities = 34/152 (22%), Positives = 60/152 (39%), Gaps = 25/152 (16%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
             G++YL Q      I RD+ + NIL+ E   AK+ADFG SR   V       T      
Sbjct: 137 ARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY---VKKTMGRLPV 190

Query: 107 GFLNTE------LTEKSDVDSFEIVILEIITG-------------ILTVDLSFKGEFDII 147
            ++  E       T  SDV S+ +++ EI++                 +   ++ E  + 
Sbjct: 191 RWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLN 250

Query: 148 SVEKAVEIAMASVSSKVNRRPLMNQVVMVREQ 179
             ++  ++       K   RP   Q+++   +
Sbjct: 251 CDDEVYDLMRQCWREKPYERPSFAQILVSLNR 282

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.1 bits (168), Expect = 5e-15
 Identities = 30/150 (20%), Positives = 58/150 (38%), Gaps = 20/150 (13%)

Query: 50  LEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR-ISPVEGGTHMSTTIAGTAGF 108
              +        + RD+ + NIL+N  +  K++DFG SR +      T+ ++       +
Sbjct: 120 AAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRW 179

Query: 109 LNTEL------TEKSDVDSFEIVILEIITG-------------ILTVDLSFKGEFDIISV 149
              E       T  SDV SF IV+ E++T              +  ++  F+    +   
Sbjct: 180 TAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCP 239

Query: 150 EKAVEIAMASVSSKVNRRPLMNQVVMVREQ 179
               ++ M     +  RRP    +V + ++
Sbjct: 240 SAIYQLMMQCWQQERARRPKFADIVSILDK 269

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.8 bits (168), Expect = 6e-15
 Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 32/149 (21%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
              L Y H      +I RD+K  N+LL    + K+ADFG S  +P    +   TT+ GT 
Sbjct: 116 ANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----SSRRTTLCGTL 168

Query: 107 GFLNTEL------TEKSDVDSFEIVILEIITG---------------ILTVDLSFKGEFD 145
            +L  E+       EK D+ S  ++  E + G               I  V+ +F     
Sbjct: 169 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVT 228

Query: 146 IISVEKAVEIAMASVSSKVNRRPLMNQVV 174
               E A ++    +    ++RP++ +V+
Sbjct: 229 ----EGARDLISRLLKHNPSQRPMLREVL 253

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.9 bits (165), Expect = 2e-14
 Identities = 29/154 (18%), Positives = 54/154 (35%), Gaps = 23/154 (14%)

Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGT 105
              G+ +L        I RD+ + NILL      K+ DFG +R    +    +       
Sbjct: 154 VAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 210

Query: 106 AGFL------NTELTEKSDVDSFEIVILEIITG--------------ILTVDLSFKGEFD 145
             ++      N   T +SDV S+ I + E+ +                  +   F+    
Sbjct: 211 VKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSP 270

Query: 146 IISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQ 179
             +  +  +I      +   +RP   Q+V + E+
Sbjct: 271 EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 304

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 67.1 bits (163), Expect = 3e-14
 Identities = 31/148 (20%), Positives = 55/148 (37%), Gaps = 23/148 (15%)

Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGT 105
               +EYL +      I RD+ + N L+ E    K+ADFG SR+                
Sbjct: 124 ISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFP 179

Query: 106 AGFL------NTELTEKSDVDSFEIVILEIITGILT-------------VDLSFKGEFDI 146
             +         + + KSDV +F +++ EI T  ++             ++  ++ E   
Sbjct: 180 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPE 239

Query: 147 ISVEKAVEIAMASVSSKVNRRPLMNQVV 174
              EK  E+  A      + RP   ++ 
Sbjct: 240 GCPEKVYELMRACWQWNPSDRPSFAEIH 267

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.2 bits (161), Expect = 5e-14
 Identities = 32/148 (21%), Positives = 57/148 (38%), Gaps = 19/148 (12%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
           C  +EYL     +  + RD+ + N+L++E   AK++DFG ++ +           +  TA
Sbjct: 113 CEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS-STQDTGKLPVKWTA 168

Query: 107 --GFLNTELTEKSDVDSFEIVILEIITG-------------ILTVDLSFKGEFDIISVEK 151
                  + + KSDV SF I++ EI +              +  V+  +K +        
Sbjct: 169 PEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPA 228

Query: 152 AVEIAMASVSSKVNRRPLMNQVVMVREQ 179
             E+           RP   Q+    E 
Sbjct: 229 VYEVMKNCWHLDAAMRPSFLQLREQLEH 256

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.9 bits (160), Expect = 6e-14
 Identities = 24/149 (16%), Positives = 53/149 (35%), Gaps = 23/149 (15%)

Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR-ISPVEGGTHMSTTIAG 104
              G++YL +      + RD+ + N+LL  +  AK++DFG S+ +   +      +    
Sbjct: 118 VSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKW 174

Query: 105 TAGFL------NTELTEKSDVDSFEIVILEIITG-------------ILTVDLSFKGEFD 145
              +         + + +SDV S+ + + E ++              +  ++   + E  
Sbjct: 175 PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECP 234

Query: 146 IISVEKAVEIAMASVSSKVNRRPLMNQVV 174
                +   +       K   RP    V 
Sbjct: 235 PECPPELYALMSDCWIYKWEDRPDFLTVE 263

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.8 bits (160), Expect = 7e-14
 Identities = 28/97 (28%), Positives = 39/97 (40%), Gaps = 16/97 (16%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
              L YLH    + II RD+K+ NIL       KLADFG S             +  GT 
Sbjct: 120 LDALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGVSAK--NTRTIQRRDSFIGTP 174

Query: 107 GFLNTEL-----------TEKSDVDSFEIVILEIITG 132
            ++  E+             K+DV S  I ++E+   
Sbjct: 175 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEI 211

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.0 bits (160), Expect = 9e-14
 Identities = 29/151 (19%), Positives = 55/151 (36%), Gaps = 21/151 (13%)

Query: 45  VCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGG--THMSTTI 102
                 + +        + RD+ + N +L+EK   K+ADFG +R    +     H  T  
Sbjct: 135 FGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA 194

Query: 103 AGTAGFLNTEL------TEKSDVDSFEIVILEIITG-------------ILTVDLSFKGE 143
                ++  E       T KSDV SF +++ E++T               + +    +  
Sbjct: 195 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLL 254

Query: 144 FDIISVEKAVEIAMASVSSKVNRRPLMNQVV 174
                 +   E+ +     K   RP  +++V
Sbjct: 255 QPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 285

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 65.4 bits (159), Expect = 1e-13
 Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 18/93 (19%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGF 108
           GL YLH    H +I RD+K+ NILL+E    KL DFG + I         + +  GT  +
Sbjct: 127 GLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASI------MAPANSFVGTPYW 177

Query: 109 LNTEL---------TEKSDVDSFEIVILEIITG 132
           +  E+           K DV S  I  +E+   
Sbjct: 178 MAPEVILAMDEGQYDGKVDVWSLGITCIELAER 210

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.5 bits (156), Expect = 3e-13
 Identities = 30/148 (20%), Positives = 56/148 (37%), Gaps = 22/148 (14%)

Query: 47  CPGLEYLHQGL-----KHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGT--HMS 99
             GL +LH  +     K  I  RD+KS NIL+ +     +AD G +        T     
Sbjct: 110 ASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAP 169

Query: 100 TTIAGTAGFLNTEL------------TEKSDVDSFEIVILEIITGILTVDLSFKGE---F 144
               GT  ++  E+             +++D+ +  +V  EI        +    +   +
Sbjct: 170 NHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY 229

Query: 145 DIISVEKAVEIAMASVSSKVNRRPLMNQ 172
           D++  + +VE     V  +  R  + N+
Sbjct: 230 DLVPSDPSVEEMRKVVCEQKLRPNIPNR 257

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.9 bits (155), Expect = 4e-13
 Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 6/89 (6%)

Query: 50  LEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFL 109
           +  L       II RD+K  NILLNE +  ++ DFG +++   E     + +  GTA ++
Sbjct: 118 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV 177

Query: 110 NTEL------TEKSDVDSFEIVILEIITG 132
           + EL       + SD+ +   +I +++ G
Sbjct: 178 SPELLTEKSACKSSDLWALGCIIYQLVAG 206

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.9 bits (155), Expect = 4e-13
 Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 11/93 (11%)

Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGT 105
           C   LE+LH    + +I RD+KS NILL      KL DFG      +       +T+ GT
Sbjct: 125 CLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCA--QITPEQSKRSTMVGT 179

Query: 106 AGFLNTE------LTEKSDVDSFEIVILEIITG 132
             ++  E         K D+ S  I+ +E+I G
Sbjct: 180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 212

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.8 bits (149), Expect = 2e-12
 Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 9/92 (9%)

Query: 50  LEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMS--TTIAGTAG 107
           L  L+   ++ I+ RDMK+ N+L+      KLADFG +R   +   +  +  T    T  
Sbjct: 127 LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLW 186

Query: 108 FLNTEL-------TEKSDVDSFEIVILEIITG 132
           +   EL           D+     ++ E+ T 
Sbjct: 187 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTR 218

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.3 bits (148), Expect = 3e-12
 Identities = 28/147 (19%), Positives = 54/147 (36%), Gaps = 23/147 (15%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSR-ISPVEGGTHMSTTIAGTAG 107
           G++YL +      + RD+ + N+LL  +  AK++DFG S+ +   E      T       
Sbjct: 119 GMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 175

Query: 108 FLNTE------LTEKSDVDSFEIVILEIITG-------------ILTVDLSFKGEFDIIS 148
           +   E       + KSDV SF +++ E  +                 ++   +       
Sbjct: 176 WYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGC 235

Query: 149 VEKAVEIAMASVSSKVNRRPLMNQVVM 175
             +  ++     +  V  RP    V +
Sbjct: 236 PREMYDLMNLCWTYDVENRPGFAAVEL 262

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.6 bits (146), Expect = 5e-12
 Identities = 26/147 (17%), Positives = 49/147 (33%), Gaps = 23/147 (15%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
              L YL        + RD+ + N+L++     KL DFG SR    +   + ++      
Sbjct: 118 STALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPI 173

Query: 107 GFLNTE------LTEKSDVDSFEIVILEIITG-------------ILTVDLSFKGEFDII 147
            ++  E       T  SDV  F + + EI+               I  ++   +      
Sbjct: 174 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 233

Query: 148 SVEKAVEIAMASVSSKVNRRPLMNQVV 174
                  +     +   +RRP   ++ 
Sbjct: 234 CPPTLYSLMTKCWAYDPSRRPRFTELK 260

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.3 bits (145), Expect = 9e-12
 Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 16/116 (13%)

Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGT 105
              GL++LH    H ++ RD+K  NIL+    Q KLADFG +RI          T++  T
Sbjct: 125 LLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYS---FQMALTSVVVT 178

Query: 106 AGFL------NTELTEKSDVDSFEIVILEIITGILTVDLSFKGEFDIISVEKAVEI 155
             +        +      D+ S   +  E+          F+G  D+  + K +++
Sbjct: 179 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRR----KPLFRGSSDVDQLGKILDV 230

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 60.1 bits (145), Expect = 1e-11
 Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 11/89 (12%)

Query: 50  LEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFL 109
              L       II RD+K  NILL++    K+ DFG ++  P      ++ T+ GT  ++
Sbjct: 114 CLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVP-----DVTYTLCGTPDYI 168

Query: 110 NTE------LTEKSDVDSFEIVILEIITG 132
             E        +  D  SF I+I E++ G
Sbjct: 169 APEVVSTKPYNKSIDWWSFGILIYEMLAG 197

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.5 bits (143), Expect = 2e-11
 Identities = 36/196 (18%), Positives = 71/196 (36%), Gaps = 28/196 (14%)

Query: 9   LTGPLLVELIGKQKNNALELGFRGNPELVDQQGKEEV------CCPGLEYLHQGLKHPII 62
            +   L E +  ++   LE  +  +    +Q   +++         G+EYL        I
Sbjct: 101 ASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCI 157

Query: 63  QRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEK 116
            RD+ + N+L+ E    K+ADFG +R          +T       ++  E       T +
Sbjct: 158 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQ 217

Query: 117 SDVDSFEIVILEIITG-------------ILTVDLSFKGEFDIISVEKAVEIAMASVSSK 163
           SDV SF +++ EI T                 +    + +       +   +      + 
Sbjct: 218 SDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAV 277

Query: 164 VNRRPLMNQVVMVREQ 179
            ++RP   Q+V   ++
Sbjct: 278 PSQRPTFKQLVEDLDR 293

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.7 bits (141), Expect = 2e-11
 Identities = 26/113 (23%), Positives = 45/113 (39%), Gaps = 13/113 (11%)

Query: 50  LEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFL 109
           L+ L    +H I+ RD+K  N+LL+E    KLADFG ++           T    T  + 
Sbjct: 110 LQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKS--FGSPNRAYTHQVVTRWYR 167

Query: 110 NTEL-------TEKSDVDSFEIVILEIITGILTVDLSFKGEFDIISVEKAVEI 155
             EL           D+ +   ++ E++           G+ D+  + +  E 
Sbjct: 168 APELLFGARMYGVGVDMWAVGCILAELLLR----VPFLPGDSDLDQLTRIFET 216

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.3 bits (140), Expect = 4e-11
 Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 8/89 (8%)

Query: 50  LEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFL 109
           +  L       ++ RD+K  N++L++    K+ DFG  +    +G T    T  GT  +L
Sbjct: 115 VSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK--TFCGTPEYL 172

Query: 110 ------NTELTEKSDVDSFEIVILEIITG 132
                 + +     D     +V+ E++ G
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCG 201

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.5 bits (138), Expect = 6e-11
 Identities = 26/152 (17%), Positives = 43/152 (28%), Gaps = 28/152 (18%)

Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTH-MSTTIAG 104
              G+ YL        I RD+ + N+LL  +   K+ DFG  R  P     + M      
Sbjct: 120 VAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV 176

Query: 105 TAGFL------NTELTEKSDVDSFEIVILEIITG----------------ILTVDLSFKG 142
              +           +  SD   F + + E+ T                 I         
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 236

Query: 143 EFDIISVEKAVEIAMASVSSKVNRRPLMNQVV 174
             D    +    + +   + K   RP    + 
Sbjct: 237 PEDC--PQDIYNVMVQCWAHKPEDRPTFVALR 266

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 57.0 bits (137), Expect = 1e-10
 Identities = 24/98 (24%), Positives = 41/98 (41%), Gaps = 18/98 (18%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
              +  LH   K  I+ RD+K  NILL++ +  KL DFG S              + GT 
Sbjct: 120 LEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD---PGEKLREVCGTP 173

Query: 107 GFLNTEL------------TEKSDVDSFEIVILEIITG 132
            +L  E+             ++ D+ S  +++  ++ G
Sbjct: 174 SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 211

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 56.4 bits (135), Expect = 2e-10
 Identities = 15/103 (14%), Positives = 37/103 (35%), Gaps = 19/103 (18%)

Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILLNEKV-----QAKLADFGQSRISPVEGGT---- 96
               ++ +H+     ++ RD+K  N L+            + DFG  +            
Sbjct: 110 MLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIP 166

Query: 97  -HMSTTIAGTAGFLNTEL------TEKSDVDSFEIVILEIITG 132
                 ++GTA +++         + + D+++   V +  + G
Sbjct: 167 YREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRG 209

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 56.3 bits (135), Expect = 2e-10
 Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 6/89 (6%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
             GLE++H      ++ RD+K  NILL+E    +++D G +     +       T    A
Sbjct: 117 ILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMA 173

Query: 107 G---FLNTELTEKSDVDSFEIVILEIITG 132
                        +D  S   ++ +++ G
Sbjct: 174 PEVLQKGVAYDSSADWFSLGCMLFKLLRG 202

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.4 bits (133), Expect = 4e-10
 Identities = 18/94 (19%), Positives = 38/94 (40%), Gaps = 14/94 (14%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEK--VQAKLADFGQSRISPVEGGTHMSTTIAG 104
           C  L++LH    H I   D++  NI+   +     K+ +FGQ+R             +  
Sbjct: 112 CEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP---GDNFRLLFT 165

Query: 105 TAGFLNTEL------TEKSDVDSFEIVILEIITG 132
              +   E+      +  +D+ S   ++  +++G
Sbjct: 166 APEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSG 199

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.1 bits (132), Expect = 5e-10
 Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 11/92 (11%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
             GL++LH      I+ RD+K  NILL++    K+ADFG  + + +        T  GT 
Sbjct: 113 ILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT--NTFCGTP 167

Query: 107 GFLNTEL------TEKSDVDSFEIVILEIITG 132
            ++  E+          D  SF +++ E++ G
Sbjct: 168 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIG 199

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.2 bits (129), Expect = 1e-09
 Identities = 20/88 (22%), Positives = 36/88 (40%), Gaps = 5/88 (5%)

Query: 50  LEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRI--SPVEGGTHMSTTIAGTAG 107
           L+ L       ++ RD+K  N+L+N   + KLA+FG +R    PV   +    T+     
Sbjct: 111 LKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPP 170

Query: 108 FL---NTELTEKSDVDSFEIVILEIITG 132
            +       +   D+ S   +  E+   
Sbjct: 171 DVLFGAKLYSTSIDMWSAGCIFAELANA 198

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 53.9 bits (129), Expect = 1e-09
 Identities = 20/91 (21%), Positives = 40/91 (43%), Gaps = 8/91 (8%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKV--QAKLADFGQSRISPVEGGTHMSTTIAG 104
           C GL ++H   ++  +  D+K  NI+   K   + KL DFG +     +    ++T  A 
Sbjct: 134 CKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAE 190

Query: 105 TAG---FLNTELTEKSDVDSFEIVILEIITG 132
            A         +   +D+ S  ++   +++G
Sbjct: 191 FAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 221

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.3 bits (127), Expect = 2e-09
 Identities = 24/144 (16%), Positives = 46/144 (31%), Gaps = 19/144 (13%)

Query: 50  LEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFL 109
            + +     +  + RD+ + N ++ E    K+ DFG +R                   ++
Sbjct: 143 ADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 202

Query: 110 NTEL------TEKSDVDSFEIVILEIITGIL----------TVDLSFKGEFDIIS---VE 150
           + E       T  SDV SF +V+ EI T              +    +G          +
Sbjct: 203 SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPD 262

Query: 151 KAVEIAMASVSSKVNRRPLMNQVV 174
              E+           RP   +++
Sbjct: 263 MLFELMRMCWQYNPKMRPSFLEII 286

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 53.0 bits (126), Expect = 2e-09
 Identities = 18/88 (20%), Positives = 37/88 (42%), Gaps = 5/88 (5%)

Query: 50  LEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTT-----IAG 104
           L  +       ++ RD+K  N+L+N + + K+ADFG +R   +    +          A 
Sbjct: 110 LNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAP 169

Query: 105 TAGFLNTELTEKSDVDSFEIVILEIITG 132
                + + +   D+ S   +  E++ G
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNG 197

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 52.9 bits (126), Expect = 3e-09
 Identities = 18/95 (18%), Positives = 34/95 (35%), Gaps = 14/95 (14%)

Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILL-NEKVQAKLADFGQSRISPVEGGTHMSTTIAG 104
               L+Y H      I+ RD+K  N+++ +E  + +L D+G +                 
Sbjct: 138 ILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF---YHPGQEYNVRVA 191

Query: 105 TAGFLNTEL-------TEKSDVDSFEIVILEIITG 132
           +  F   EL           D+ S   ++  +I  
Sbjct: 192 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFR 226

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.2 bits (124), Expect = 5e-09
 Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 9/95 (9%)

Query: 45  VCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAG 104
                L+ L     H ++ RD+K  N+L+N +   KLADFG +R   V       T    
Sbjct: 107 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV--RTYTHEVV 164

Query: 105 TAGFLNTEL-------TEKSDVDSFEIVILEIITG 132
           T  +   E+       +   D+ S   +  E++T 
Sbjct: 165 TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR 199

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 52.1 bits (124), Expect = 6e-09
 Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 7/96 (7%)

Query: 44  EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGT-HMSTTI 102
           EV     + L+   ++ II RD+K  NI+++     K+ DFG +R     G +   +  +
Sbjct: 115 EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 174

Query: 103 AGTAGFLNTE------LTEKSDVDSFEIVILEIITG 132
            GTA +L+ E      +  +SDV S   V+ E++TG
Sbjct: 175 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 210

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (121), Expect = 1e-08
 Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 11/94 (11%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMS-TTIAGT 105
             GL+Y+H      ++ RD+K +N+LLN     K+ DFG +R++  +       T    T
Sbjct: 119 LRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 175

Query: 106 AGFLNTEL-------TEKSDVDSFEIVILEIITG 132
             +   E+       T+  D+ S   ++ E+++ 
Sbjct: 176 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 209

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.7 bits (118), Expect = 3e-08
 Identities = 24/144 (16%), Positives = 53/144 (36%), Gaps = 28/144 (19%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLN-EKVQAKLADFGQSRISPVEGGTHMSTTIAGT 105
              + + H      ++ RD+K  NIL++  + + KL DFG   +        + T   GT
Sbjct: 120 LEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK----DTVYTDFDGT 172

Query: 106 AGFLNTEL-------TEKSDVDSFEIVILEIITG---------ILTVDLSFKGEFDIISV 149
             +   E           + V S  I++ +++ G         I+   + F+        
Sbjct: 173 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVS---- 228

Query: 150 EKAVEIAMASVSSKVNRRPLMNQV 173
            +   +    ++ + + RP   ++
Sbjct: 229 SECQHLIRWCLALRPSDRPTFEEI 252

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.8 bits (118), Expect = 3e-08
 Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 14/93 (15%)

Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGT 105
                EYLH      +I RD+K  N+L++++   ++ DFG ++          + T+ GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWTLCGT 201

Query: 106 AGFLNTEL------TEKSDVDSFEIVILEIITG 132
              L  E+       +  D  +  ++I E+  G
Sbjct: 202 PEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.6 bits (115), Expect = 9e-08
 Identities = 26/114 (22%), Positives = 45/114 (39%), Gaps = 16/114 (14%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEK-VQAKLADFGQSRISPVEGGTHMSTTIAGTAG 107
            L Y+H      I  RD+K  N+LL+      KL DFG ++   +  G    + I     
Sbjct: 134 SLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ--LVRGEPNVSYICSRYY 188

Query: 108 FLNTEL------TEKSDVDSFEIVILEIITGILTVDLSFKGEFDIISVEKAVEI 155
                +      T   DV S   V+ E++ G       F G+  +  + + +++
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLG----QPIFPGDSGVDQLVEIIKV 238

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 47.9 bits (113), Expect = 1e-07
 Identities = 22/98 (22%), Positives = 38/98 (38%), Gaps = 17/98 (17%)

Query: 49  GLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLA---DFGQSRISPVEGGT-----HMST 100
            +EY+H       I RD+K  N L+    +  L    DFG ++               + 
Sbjct: 115 RIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENK 171

Query: 101 TIAGTAGF------LNTELTEKSDVDSFEIVILEIITG 132
            + GTA +      L  E + + D++S   V++    G
Sbjct: 172 NLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLG 209

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 47.3 bits (112), Expect = 2e-07
 Identities = 17/93 (18%), Positives = 36/93 (38%), Gaps = 9/93 (9%)

Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGT 105
               ++YLH         +        L+E  +  ++DFG S++   E    + +T  GT
Sbjct: 116 VLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGT 172

Query: 106 AGFL------NTELTEKSDVDSFEIVILEIITG 132
            G++          ++  D  S  ++   ++ G
Sbjct: 173 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 205

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 46.6 bits (110), Expect = 5e-07
 Identities = 19/92 (20%), Positives = 41/92 (44%), Gaps = 8/92 (8%)

Query: 46  CCPGLEYLHQGLKHPIIQRDMKSTNILL--NEKVQAKLADFGQSRISPVEGGTHMSTTIA 103
            C GL+++H+   H I+  D+K  NI+    +    K+ DFG +     +    ++T  A
Sbjct: 136 ACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATA 192

Query: 104 GTAG---FLNTELTEKSDVDSFEIVILEIITG 132
             A         +   +D+ +  ++   +++G
Sbjct: 193 EFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG 224

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.5 bits (107), Expect = 1e-06
 Identities = 21/99 (21%), Positives = 40/99 (40%), Gaps = 13/99 (13%)

Query: 44  EVCCPGLEYLHQGLKHPIIQRDMKSTNILLNE----KVQAKLADFGQSRISPVEGGTHMS 99
           E     L  ++      I   D+K  NI+L +    K + K+ DFG +         +  
Sbjct: 117 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID---FGNEF 173

Query: 100 TTIAGTAGFLNTEL------TEKSDVDSFEIVILEIITG 132
             I GT  F+  E+        ++D+ S  ++   +++G
Sbjct: 174 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.5 bits (107), Expect = 1e-06
 Identities = 21/95 (22%), Positives = 39/95 (41%), Gaps = 15/95 (15%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLN---EKVQAKLADFGQSRISPVEGGTHMSTTIA 103
              ++YLH      I  RD+K  N+L          KL DFG ++ +      +  TT  
Sbjct: 121 GEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT---SHNSLTTPC 174

Query: 104 GTAGFLNTEL------TEKSDVDSFEIVILEIITG 132
            T  ++  E+       +  D+ S  +++  ++ G
Sbjct: 175 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 209

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.8 bits (105), Expect = 1e-06
 Identities = 21/90 (23%), Positives = 33/90 (36%), Gaps = 7/90 (7%)

Query: 50  LEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFL 109
           +  L    K  II RD+K  NILL+      L DFG S+    +                
Sbjct: 139 VLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMA 198

Query: 110 NTEL-------TEKSDVDSFEIVILEIITG 132
              +        +  D  S  +++ E++TG
Sbjct: 199 PDIVRGGDSGHDKAVDWWSLGVLMYELLTG 228

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 44.0 bits (103), Expect = 2e-06
 Identities = 23/132 (17%), Positives = 48/132 (36%), Gaps = 9/132 (6%)

Query: 2   YFPNRNKLTGPLLVELIGKQKNN-ALELGFRGNPELVDQQGKEEVC---CPGLEYLHQGL 57
            F    KL G  + ++   + N   +EL        V  +  +EV       +   +   
Sbjct: 64  EFRALQKLQGLAVPKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYH-- 121

Query: 58  KHPIIQRDMKSTNILLNEKVQAKLADFGQSR-ISPVEGGTHMSTTIAGTAGFLNTELTEK 116
              I+  D+   N+L++E+    + DF QS  +        +   +     + +     +
Sbjct: 122 -RGIVHGDLSQYNVLVSEE-GIWIIDFPQSVEVGEEGWREILERDVRNIITYFSRTYRTE 179

Query: 117 SDVDSFEIVILE 128
            D++S    IL+
Sbjct: 180 KDINSAIDRILQ 191

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.2 bits (98), Expect = 1e-05
 Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 12/92 (13%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
             G+++LH      II RD+K +NI++      K+ DFG +R     G + M T    T 
Sbjct: 129 LCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART---AGTSFMMTPYVVTR 182

Query: 107 G------FLNTELTEKSDVDSFEIVILEIITG 132
                   L     E  D+ S   ++ E++  
Sbjct: 183 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRH 214

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (94), Expect = 4e-05
 Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 5/88 (5%)

Query: 47  CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTA 106
             GL+Y+H      II RD+K +N+ +NE  + K+ DFG +R +  E   +++T      
Sbjct: 131 LRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAP 187

Query: 107 GFL--NTELTEKSDVDSFEIVILEIITG 132
             +       +  D+ S   ++ E++TG
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTG 215

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.0 bits (92), Expect = 8e-05
 Identities = 25/138 (18%), Positives = 52/138 (37%), Gaps = 9/138 (6%)

Query: 2   YFPNRNKLTGPLLVELIGKQKNNALELGFRGNPELVDQQGKEEVCCPGLEYLHQGLKHPI 61
                N +   ++ E++G+     ++        L+  +   +    GL+Y+H+  +  I
Sbjct: 90  NHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHR--RCGI 147

Query: 62  IQRDMKSTNILLN-EKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTEL------T 114
           I  D+K  N+L+        L     + +          T    T  + + E+       
Sbjct: 148 IHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWG 207

Query: 115 EKSDVDSFEIVILEIITG 132
             +D+ S   +I E+ITG
Sbjct: 208 CGADIWSTACLIFELITG 225

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	188
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.95
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.55
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	96.22
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	93.65
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	90.67
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	88.19
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	81.7

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-46  Score=282.64  Aligned_cols=175  Identities=25%  Similarity=0.359  Sum_probs=142.6

Q ss_pred             cccccCCCeeeeccc--CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      |.+++|||||+++++  .+..++||||+++|+|.+++ ....            |++.||+|||+   .+|+||||||+|
T Consensus        58 l~~l~HpnIv~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~---~~ivHrDlKp~N  134 (276)
T d1uwha_          58 LRKTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNN  134 (276)
T ss_dssp             HTTCCCTTBCCEEEEECSSSCEEEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGG
T ss_pred             HHhCCCCCEeeeeEEEeccEEEEEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhc---CCEeccccCHHH
Confidence            678999999999999  77889999999999999998 3322            99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC---------CCCccchHHHHHHHHHHHhCCccccccCC
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE---------LTEKSDVDSFEIVILEIITGILTVDLSFK  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe---------~~~~~di~s~G~~l~~~~~g~~p~~~~~~  141 (188)
                      |+++.++.+||+|||+++...............||+.|+|||         ++.++|||||||++|||++|..||.....
T Consensus       135 iLl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~  214 (276)
T d1uwha_         135 IFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINN  214 (276)
T ss_dssp             EEEETTSSEEECCCCCSCC------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC
T ss_pred             EEEcCCCCEEEccccceeeccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCCh
Confidence            999999999999999998654333333344568999999998         36689999999999999999999854211


Q ss_pred             -----------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          142 -----------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       142 -----------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                                       ...+...+..+.+++..||+.+|++||||++|++.|+.+.++
T Consensus       215 ~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~  273 (276)
T d1uwha_         215 RDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS  273 (276)
T ss_dssp             HHHHHHHHHHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHhcCCCCCcchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHc
Confidence                             112334567899999999999999999999999999987643

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.4e-44  Score=275.10  Aligned_cols=175  Identities=21%  Similarity=0.232  Sum_probs=136.4

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      |++++|||||+++++   ++..++||||+++|+|.+++ ...+            |++.||.|||+   .+++||||||+
T Consensus        81 l~~l~HpnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHrDlKp~  157 (299)
T d1jpaa_          81 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLAD---MNYVHRDLAAR  157 (299)
T ss_dssp             HTTCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGG
T ss_pred             HHhCCCCCCccEEEEEeeCCEEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhh---CCCccCccccc
Confidence            578999999999999   78899999999999999988 3222            99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCc---ceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCcccccc
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTH---MSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLS  139 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~---~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~  139 (188)
                      |||++.++.+||+|||+++.........   ......|++.|+|||      ++.++|||||||++|||++ |..||...
T Consensus       158 NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~  237 (299)
T d1jpaa_         158 NILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM  237 (299)
T ss_dssp             GEEECTTCCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             eEEECCCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCC
Confidence            9999999999999999998653222111   112245788999998      6889999999999999998 88888532


Q ss_pred             C------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          140 F------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       140 ~------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                      .            ..+.+...+..+.+++.+||+.+|++||||++|++.|+++.++
T Consensus       238 ~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~~  293 (299)
T d1jpaa_         238 TNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRN  293 (299)
T ss_dssp             CHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             CHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcC
Confidence            1            1223445667899999999999999999999999999887543

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-44  Score=271.06  Aligned_cols=167  Identities=22%  Similarity=0.274  Sum_probs=140.5

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc-c-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE-E-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~-~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      |++++||||++++++   ++..++||||+++|+|.+++.+. .           |++.||.|||+   .+|+||||||+|
T Consensus        57 l~~l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~---~~IiHrDiKp~N  133 (271)
T d1nvra_          57 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPEN  133 (271)
T ss_dssp             HHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGG
T ss_pred             HHhCCCCCEeeEeeeeccCceeEEEEeccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---cCCccCcccHHH
Confidence            577899999999999   88889999999999999999332 2           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCCCC
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFKGE  143 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~~  143 (188)
                      |+++.++.+||+|||+++...............||+.|+|||       .+.++||||+||++|+|++|..||+......
T Consensus       134 ILl~~~~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~  213 (271)
T d1nvra_         134 LLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC  213 (271)
T ss_dssp             EEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTS
T ss_pred             EEECCCCCEEEccchhheeeccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHH
Confidence            999999999999999998654222223344568999999999       2567999999999999999999996543221


Q ss_pred             --------------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          144 --------------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       144 --------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                    .....+..+.+++.+||+.||++|||++|+++
T Consensus       214 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~  259 (271)
T d1nvra_         214 QEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKK  259 (271)
T ss_dssp             HHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHhcCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence                          11234567889999999999999999999976

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-44  Score=271.11  Aligned_cols=173  Identities=24%  Similarity=0.308  Sum_probs=135.1

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||++++|+   ++..++||||+++|+|.+++ ....            |+|.||.|||+   .+|+||||||+
T Consensus        54 l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~---~~iiHrDlKp~  130 (263)
T d1sm2a_          54 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAAR  130 (263)
T ss_dssp             HHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCTTCSGG
T ss_pred             HHhcCCCCcccccceeccCCceEEEEEecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhc---cceeecccchh
Confidence            578999999999998   78899999999999999998 3222            99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhC-Ccccccc---
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITG-ILTVDLS---  139 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g-~~p~~~~---  139 (188)
                      ||+++.++.+||+|||+++.... ..........|+..|+|||      ++.++||||||+++|||+++ ..|+...   
T Consensus       131 Nill~~~~~~Kl~DFGla~~~~~-~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~  209 (263)
T d1sm2a_         131 NCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS  209 (263)
T ss_dssp             GEEECGGGCEEECSCC-------------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHH
T ss_pred             heeecCCCCeEecccchheeccC-CCceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHH
Confidence            99999999999999999976432 2222233457889999998      68899999999999999995 4555321   


Q ss_pred             ---------CCCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          140 ---------FKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       140 ---------~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                               .....+...+..+.+++..||+.+|++||||++|++.|+++.+
T Consensus       210 ~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~e  261 (263)
T d1sm2a_         210 EVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE  261 (263)
T ss_dssp             HHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCCCCCccccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence                     1122344456789999999999999999999999999998754

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-43  Score=270.10  Aligned_cols=172  Identities=22%  Similarity=0.278  Sum_probs=144.4

Q ss_pred             cccccCCCeeeeccc--CCccEEEEecCCCCChhhhc-CCc-c-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQ-GKE-E-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~-~~~-~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      |++++|||||+++++  .+..++||||+++|+|.+++ ... .           |++.||.|||+   .+|+||||||+|
T Consensus        63 l~~l~HpnIv~l~g~~~~~~~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~---~~iiHrDlKp~N  139 (285)
T d1u59a_          63 MHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARN  139 (285)
T ss_dssp             HHHCCCTTBCCEEEEEESSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGG
T ss_pred             HHhCCCCCEeeEeeeeccCeEEEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCcCchhh
Confidence            567999999999999  77899999999999999987 222 2           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCC-cceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccC--
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGT-HMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSF--  140 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~--  140 (188)
                      |+++.++.+||+|||+++........ .......|++.|+|||      ++.++|||||||++|||++ |..||....  
T Consensus       140 ill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~  219 (285)
T d1u59a_         140 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP  219 (285)
T ss_dssp             EEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH
T ss_pred             eeeccCCceeeccchhhhcccccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHH
Confidence            99999999999999999865422221 1122356888999999      6889999999999999998 899986422  


Q ss_pred             ----------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhc
Q 039565          141 ----------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQG  180 (188)
Q Consensus       141 ----------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~  180 (188)
                                ..+.+...+..+.+++..||+.+|++||||.+|++.|+..
T Consensus       220 ~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~  269 (285)
T d1u59a_         220 EVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC  269 (285)
T ss_dssp             HHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence                      2234455677899999999999999999999999988754

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-43  Score=274.36  Aligned_cols=170  Identities=21%  Similarity=0.263  Sum_probs=144.0

Q ss_pred             cccc-cCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc-------------------------c---------cH
Q 039565            6 RNKL-TGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE-------------------------E---------VC   46 (188)
Q Consensus         6 l~~l-~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~-------------------------~---------~i   46 (188)
                      |.++ +|||||+++++   .+..++||||+++|+|.+++ .+.                         .         |+
T Consensus        94 l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi  173 (325)
T d1rjba_          94 MTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQV  173 (325)
T ss_dssp             HHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHH
T ss_pred             HHHhcCCCcEeEEEEEEeeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHH
Confidence            4566 89999999999   78899999999999999998 321                         1         99


Q ss_pred             HHHHHHHhcCCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchH
Q 039565           47 CPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVD  120 (188)
Q Consensus        47 ~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~  120 (188)
                      +.||+|||+   .+|+||||||+||+++.++.+||+|||+++...............||+.|+|||      ++.++|||
T Consensus       174 ~~gl~yLH~---~~IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~Diw  250 (325)
T d1rjba_         174 AKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVW  250 (325)
T ss_dssp             HHHHHHHHH---TTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHH
T ss_pred             HHHHHHHHh---CCeeeccCchhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceecc
Confidence            999999999   999999999999999999999999999998654333333334567899999999      78999999


Q ss_pred             HHHHHHHHHHh-CCccccccC-------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHh
Q 039565          121 SFEIVILEIIT-GILTVDLSF-------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVRE  178 (188)
Q Consensus       121 s~G~~l~~~~~-g~~p~~~~~-------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~  178 (188)
                      ||||++|||++ |..||....             ..+.+...+..+.+++..||+.+|++|||+++|+++|.
T Consensus       251 S~Gvil~emlt~g~~Pf~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~  322 (325)
T d1rjba_         251 SYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG  322 (325)
T ss_dssp             HHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             chhHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence            99999999997 899985422             12234456778999999999999999999999999985

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.6e-43  Score=269.91  Aligned_cols=174  Identities=24%  Similarity=0.245  Sum_probs=144.6

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CC-cc------------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GK-EE------------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~-~~------------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      |++++|||||+++++   .+..+++|||+++|+|..++ .. ..            |++.||.|||+   .+|+||||||
T Consensus        67 l~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~---~~iiHrDlKp  143 (287)
T d1opja_          67 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAA  143 (287)
T ss_dssp             HHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSG
T ss_pred             HHhCCCCCEecCCccEeeCCeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHH---CCcccCcccc
Confidence            678999999999998   78899999999999999998 22 11            99999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCcccccc---
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLS---  139 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~---  139 (188)
                      +|||++.++.+||+|||+++.... ..........|+..|+|||      ++.++|||||||++|+|++|..|+...   
T Consensus       144 ~NILl~~~~~~Kl~DFG~a~~~~~-~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~  222 (287)
T d1opja_         144 RNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL  222 (287)
T ss_dssp             GGEEECGGGCEEECCCCCTTTCCS-SSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred             CeEEECCCCcEEEccccceeecCC-CCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchH
Confidence            999999999999999999986432 2222233456788899999      688999999999999999977554221   


Q ss_pred             ----------CCCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          140 ----------FKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       140 ----------~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                                ...+.+...+..+.+++..||+.||++|||+++|++.|+.+...
T Consensus       223 ~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~~~  276 (287)
T d1opja_         223 SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE  276 (287)
T ss_dssp             HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTSS
T ss_pred             HHHHHHHhcCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence                      12234445677899999999999999999999999999886543

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-43  Score=268.62  Aligned_cols=172  Identities=20%  Similarity=0.240  Sum_probs=143.0

Q ss_pred             cccccCCCeeeeccc--CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCcE
Q 039565            6 RNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTNI   71 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~ni   71 (188)
                      |++++|||||+++++  .+..++||||+++|+|.+++ ....           |++.||.|||+   .+|+||||||+||
T Consensus        62 l~~l~HpnIv~~~g~~~~~~~~lvmE~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~---~~iiHrDlKp~Ni  138 (277)
T d1xbba_          62 MQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNV  138 (277)
T ss_dssp             HHTCCCTTBCCEEEEEESSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGE
T ss_pred             HHhCCCCCCceEEEEeccCCEEEEEEcCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHh---CCcccCCCcchhh
Confidence            578999999999999  77889999999999999999 2222           99999999999   9999999999999


Q ss_pred             EEccCCceEEecccCcccccCCCCCc-ceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCcccccc----
Q 039565           72 LLNEKVQAKLADFGQSRISPVEGGTH-MSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLS----  139 (188)
Q Consensus        72 ll~~~~~~kl~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~----  139 (188)
                      +++.++.+|++|||+++......... ......||+.|+|||      ++.++|||||||++|||++ |..||...    
T Consensus       139 ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~  218 (277)
T d1xbba_         139 LLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE  218 (277)
T ss_dssp             EEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH
T ss_pred             cccccCcccccchhhhhhccccccccccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHH
Confidence            99999999999999998653222221 223457888999999      6889999999999999997 89998532    


Q ss_pred             --------CCCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhc
Q 039565          140 --------FKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQG  180 (188)
Q Consensus       140 --------~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~  180 (188)
                              ...+.+...+..+.+++.+||+.+|++|||+++|++.|+..
T Consensus       219 ~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~  267 (277)
T d1xbba_         219 VTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY  267 (277)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             HHHHHHcCCCCCCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCH
Confidence                    12234455678899999999999999999999999988764

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.6e-44  Score=267.93  Aligned_cols=163  Identities=26%  Similarity=0.363  Sum_probs=140.4

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcC---Ccc---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQG---KEE---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~---~~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +++++|||||+++++   .+..++||||+++|+|.+++.   ...         |++.||.|||+   .+|+||||||+|
T Consensus        60 l~~l~hpnIv~~~~~~~~~~~~~ivmEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~---~~ivHrDiKp~N  136 (263)
T d2j4za1          60 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPEN  136 (263)
T ss_dssp             HHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGG
T ss_pred             HHhcCCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeeeecccc
Confidence            567899999999999   778999999999999999982   222         99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC---
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK---  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~---  141 (188)
                      |+++.++.+||+|||+++...    ........||+.|+|||      ++.++|||||||++|+|++|..||.....   
T Consensus       137 ill~~~~~~kl~DFG~a~~~~----~~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~  212 (263)
T d2j4za1         137 LLLGSAGELKIADFGWSVHAP----SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET  212 (263)
T ss_dssp             EEECTTSCEEECCCCSCSCCC----CCCCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred             ceecCCCCEeecccceeeecC----CCcccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHH
Confidence            999999999999999997542    12234567999999999      68999999999999999999999964321   


Q ss_pred             --------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 --------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 --------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                              ...+...++.+.+++.+||+.||++|||++|+++
T Consensus       213 ~~~i~~~~~~~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         213 YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             HHHHHTTCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHcCCCCCCccCCHHHHHHHHHHccCCHhHCcCHHHHHc
Confidence                    1234445678999999999999999999999986

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-43  Score=267.02  Aligned_cols=172  Identities=23%  Similarity=0.249  Sum_probs=142.6

Q ss_pred             cccccCCCeeeeccc--CCccEEEEecCCCCChhhhcCCc-----c---------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQGKE-----E---------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~~~~-----~---------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      |++++|||||+++++  .+..++||||+++|+|.+++...     .         |++.||.|||+   .+|+||||||+
T Consensus        62 l~~l~HpnIv~~~g~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~---~~ivHrDiKp~  138 (272)
T d1qpca_          62 MKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAA  138 (272)
T ss_dssp             HHHCCCTTBCCEEEEECSSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGG
T ss_pred             HHhCCCCCEeEEEeeeccCCeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccchh
Confidence            678999999999999  77889999999999999988222     1         99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCc-ccccc---
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGIL-TVDLS---  139 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~-p~~~~---  139 (188)
                      ||+++.++.+||+|||+++... ...........|+..|+|||      ++.++|||||||++|||++|.. |+...   
T Consensus       139 NIll~~~~~~Kl~DFGla~~~~-~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~  217 (272)
T d1qpca_         139 NILVSDTLSCKIADFGLARLIE-DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP  217 (272)
T ss_dssp             GEEECTTSCEEECCCTTCEECS-SSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH
T ss_pred             heeeecccceeeccccceEEcc-CCccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHH
Confidence            9999999999999999998653 22222233457888999999      6889999999999999999654 44321   


Q ss_pred             ---------CCCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhcc
Q 039565          140 ---------FKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGS  181 (188)
Q Consensus       140 ---------~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~  181 (188)
                               .....+...+..+.+++..||+.+|++||||++|+++|+...
T Consensus       218 ~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~f  268 (272)
T d1qpca_         218 EVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF  268 (272)
T ss_dssp             HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCCCCCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhh
Confidence                     122233456678999999999999999999999999998754

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-42  Score=265.21  Aligned_cols=165  Identities=22%  Similarity=0.260  Sum_probs=141.1

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc--CCcc---------cHHHHHHHHhcCCCCCcEEeCCCCCcE
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ--GKEE---------VCCPGLEYLHQGLKHPIIQRDMKSTNI   71 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~--~~~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~ni   71 (188)
                      |++++|||||+++++   .+..++||||+++|+|.+++  ....         |++.||.|||+   .+|+||||||+||
T Consensus        71 l~~l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~---~~iiHrDiKp~NI  147 (293)
T d1yhwa1          71 MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNI  147 (293)
T ss_dssp             HHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGE
T ss_pred             HHhCCCCCEeeEeEEEEECCEEEEEEEecCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCcHHHe
Confidence            567899999999998   88899999999999999988  2222         99999999999   9999999999999


Q ss_pred             EEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC-----
Q 039565           72 LLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF-----  140 (188)
Q Consensus        72 ll~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~-----  140 (188)
                      +++.++.+||+|||+++....  .........||+.|+|||      ++.++|||||||++|+|++|..||....     
T Consensus       148 Ll~~~~~vkl~DFG~a~~~~~--~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~  225 (293)
T d1yhwa1         148 LLGMDGSVKLTDFGFCAQITP--EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL  225 (293)
T ss_dssp             EECTTCCEEECCCTTCEECCS--TTCCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH
T ss_pred             EECCCCcEeeccchhheeecc--ccccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHH
Confidence            999999999999999986432  222344567999999999      6889999999999999999999985322     


Q ss_pred             ---------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          141 ---------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       141 ---------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                               ....+...+..+.+++.+||+.||++|||++|+++
T Consensus       226 ~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  269 (293)
T d1yhwa1         226 YLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (293)
T ss_dssp             HHHHHHCSCCCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HHHHhCCCCCCCCcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                     12233445678999999999999999999999986

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.4e-43  Score=263.99  Aligned_cols=163  Identities=22%  Similarity=0.359  Sum_probs=136.1

Q ss_pred             cccccCCCeeeeccc-------CCccEEEEecCCCCChhhhcCC---cc---------cHHHHHHHHhcCCCCC--cEEe
Q 039565            6 RNKLTGPLLVELIGK-------QKNNALELGFRGNPELVDQQGK---EE---------VCCPGLEYLHQGLKHP--IIQR   64 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-------~~~~~lv~e~~~~~~L~~~~~~---~~---------~i~~~l~~Lh~~~~~~--i~h~   64 (188)
                      |++++|||||+++++       ....++||||+++|+|.+++.+   ..         |++.||.|||+   .+  |+||
T Consensus        62 l~~l~HpnIv~~~~~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~---~~~~IiHr  138 (270)
T d1t4ha_          62 LKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHR  138 (270)
T ss_dssp             HTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCS
T ss_pred             HHhCCCCCeeeEEEEEeeccccCCEEEEEEeCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHH---CCCCEEeC
Confidence            678999999999987       3457899999999999999922   22         99999999998   77  9999


Q ss_pred             CCCCCcEEEc-cCCceEEecccCcccccCCCCCcceeeecccccccCCC-----CCCccchHHHHHHHHHHHhCCccccc
Q 039565           65 DMKSTNILLN-EKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-----LTEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        65 dl~~~nill~-~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-----~~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      ||||+||+++ .++.+||+|||+++...    ........||+.|+|||     ++.++|||||||++|+|++|..||..
T Consensus       139 DiKp~NILl~~~~~~~Kl~DFGla~~~~----~~~~~~~~GT~~Y~aPE~~~~~~~~~~DIwSlGvilyel~~g~~Pf~~  214 (270)
T d1t4ha_         139 DLKCDNIFITGPTGSVKIGDLGLATLKR----ASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSE  214 (270)
T ss_dssp             CCCGGGEEESSTTSCEEECCTTGGGGCC----TTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             CcChhhceeeCCCCCEEEeecCcceecc----CCccCCcccCccccCHHHhCCCCCCcCchhhHHHHHHHHHHCCCCCCC
Confidence            9999999997 47899999999997532    12234568999999999     78999999999999999999999954


Q ss_pred             cCC--------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          139 SFK--------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       139 ~~~--------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ...              ...+...+..+.+++.+||+.||++|||++|+++
T Consensus       215 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         215 CQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             CSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cccHHHHHHHHHcCCCCcccCccCCHHHHHHHHHHccCCHhHCcCHHHHhC
Confidence            221              1122334567899999999999999999999986

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-42  Score=263.10  Aligned_cols=174  Identities=22%  Similarity=0.256  Sum_probs=136.8

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +++++|||||+++|+   .+..++++||+.++++.+++ ....            |++.||.|||+   .+|+||||||+
T Consensus        63 l~~l~H~nIv~~~g~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~---~~iiHrDlKp~  139 (283)
T d1mqba_          63 MGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAAR  139 (283)
T ss_dssp             HHTCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGG
T ss_pred             HHhcCCCCEeeeeEEEecCCceEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccc---cccccCccccc
Confidence            567899999999999   78889999999999999887 2222            99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCC-CcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccc----
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGG-THMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDL----  138 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~----  138 (188)
                      |||++.++.+||+|||+++....... ........||..|+|||      ++.++||||||+++|||+++..|+..    
T Consensus       140 NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~  219 (283)
T d1mqba_         140 NILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN  219 (283)
T ss_dssp             GEEECTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH
T ss_pred             eEEECCCCeEEEcccchhhcccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCH
Confidence            99999999999999999986432211 11223456788999999      68899999999999999997654421    


Q ss_pred             ---------cCCCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          139 ---------SFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       139 ---------~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                               ....+.+...+..+.+++..||+.+|++||||++|++.|+.+.+
T Consensus       220 ~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~  272 (283)
T d1mqba_         220 HEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR  272 (283)
T ss_dssp             HHHHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHhccCCCCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhh
Confidence                     12223444566789999999999999999999999999987644

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-43  Score=266.89  Aligned_cols=168  Identities=21%  Similarity=0.293  Sum_probs=127.3

Q ss_pred             cccccCCCeeeeccc-----CCccEEEEecCCCCChhhhcCC-------cc---------cHHHHHHHHhcCC--CCCcE
Q 039565            6 RNKLTGPLLVELIGK-----QKNNALELGFRGNPELVDQQGK-------EE---------VCCPGLEYLHQGL--KHPII   62 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-----~~~~~lv~e~~~~~~L~~~~~~-------~~---------~i~~~l~~Lh~~~--~~~i~   62 (188)
                      |++++|||||+++++     ....++||||+++|+|.+++.+       ..         |++.||.|||+..  ..+|+
T Consensus        57 l~~l~HpnIv~~~~~~~~~~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~Ii  136 (269)
T d2java1          57 LRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVL  136 (269)
T ss_dssp             TTSCCCTTBCCEEEEEEC----CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC------
T ss_pred             HHHCCCCCEeeEEEEEEeCCCCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEE
Confidence            678999999999997     4567999999999999998821       11         9999999999811  12499


Q ss_pred             EeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccc
Q 039565           63 QRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTV  136 (188)
Q Consensus        63 h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~  136 (188)
                      ||||||+||+++.++.+||+|||+++....  .........||+.|+|||      ++.++|||||||++|+|++|..||
T Consensus       137 HrDiKp~NIll~~~~~vkl~DFG~a~~~~~--~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf  214 (269)
T d2java1         137 HRDLKPANVFLDGKQNVKLGDFGLARILNH--DTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF  214 (269)
T ss_dssp             ---CCGGGEEECTTSCEEECCHHHHHHC-------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSC
T ss_pred             eCcCchhhcCcCCCCcEEEeeccceeeccc--CCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCC
Confidence            999999999999999999999999986432  222334578999999999      688999999999999999999998


Q ss_pred             cccC------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          137 DLSF------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       137 ~~~~------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ....            ....+...+..+.+++.+||+.||++|||++|+++
T Consensus       215 ~~~~~~~~~~~i~~~~~~~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         215 TAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             CCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            6422            12234456678999999999999999999999975

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.7e-43  Score=266.88  Aligned_cols=165  Identities=22%  Similarity=0.215  Sum_probs=138.7

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-C-Cc--c---------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-G-KE--E---------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~-~~--~---------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      |++++|||||+++++   ++..++||||+++|+|.+++ + ..  .         |++.||.|||+   .+|+||||||+
T Consensus        63 l~~l~HpnIv~l~~~~~~~~~~~lvmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~---~~ivHrDiKp~  139 (288)
T d2jfla1          63 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD---NKIIHRDLKAG  139 (288)
T ss_dssp             HHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGG
T ss_pred             HHhCCCCCCCeEEEEEeeCCeEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCEEEeecChh
Confidence            567899999999999   88899999999999999987 2 22  2         99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-----------CCCccchHHHHHHHHHHHhCCccccc
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-----------LTEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-----------~~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      ||+++.++.+||+|||+++....  .........||+.|+|||           ++.++|||||||++|+|++|..||..
T Consensus       140 NIll~~~~~~Kl~DFG~a~~~~~--~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~  217 (288)
T d2jfla1         140 NILFTLDGDIKLADFGVSAKNTR--TIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHE  217 (288)
T ss_dssp             GEEECTTSCEEECCCTTCEECHH--HHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             heeECCCCCEEEEechhhhccCC--CcccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCC
Confidence            99999999999999999874321  111233567999999998           36789999999999999999999964


Q ss_pred             cCC--------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          139 SFK--------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       139 ~~~--------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ...              ...+...+..+.+++.+||+.||++|||++|+++
T Consensus       218 ~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~  268 (288)
T d2jfla1         218 LNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ  268 (288)
T ss_dssp             SCGGGHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            321              1223455778999999999999999999999987

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-42  Score=262.90  Aligned_cols=173  Identities=20%  Similarity=0.211  Sum_probs=135.5

Q ss_pred             cccccCCCeeeeccc--CCccEEEEecCCCCChhhhc--CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQ--GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~--~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      |++++||||++++++  .+..++||||+++|+|..++  ....           |++.||.|||+   .+++||||||+|
T Consensus        62 l~~l~HpnIv~l~~~~~~~~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~---~~iiHrDlKp~N  138 (273)
T d1mp8a_          62 MRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARN  138 (273)
T ss_dssp             HHTCCCTTBCCEEEEECSSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGG
T ss_pred             HHhCCCCCEeeEEEEEecCeEEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcc---cCeeccccchhh
Confidence            678999999999999  78899999999999999987  2222           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCC--
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFK--  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~--  141 (188)
                      |+++.++.+|++|||+++... ...........||+.|+|||      ++.++|||||||++|||++ |..||.....  
T Consensus       139 Ill~~~~~~Kl~DfG~a~~~~-~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~  217 (273)
T d1mp8a_         139 VLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND  217 (273)
T ss_dssp             EEEEETTEEEECC--------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG
T ss_pred             eeecCCCcEEEccchhheecc-CCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHH
Confidence            999999999999999997543 12222333456788999998      6889999999999999997 7888854321  


Q ss_pred             ----------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          142 ----------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       142 ----------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                                .+.+...+..+.+++..||+.||++|||+++|++.|+.+.+
T Consensus       218 ~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~  268 (273)
T d1mp8a_         218 VIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE  268 (273)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence                      23444567789999999999999999999999999987643

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.4e-42  Score=257.68  Aligned_cols=171  Identities=22%  Similarity=0.271  Sum_probs=143.5

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +.+++||||++++|+   ++..++||||+++|+|..++ ....            |++.||+|||+   .+|+||||||+
T Consensus        53 ~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~---~~iiH~dlk~~  129 (258)
T d1k2pa_          53 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAAR  129 (258)
T ss_dssp             HHTCCCTTBCCEEEEECCSSSEEEEEECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHH---TTBCCSCCSGG
T ss_pred             HHhcCCCceeeEEEEEeeCCceEEEEEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhh---cCcccccccce
Confidence            568899999999999   78899999999999999997 2222            99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccC--
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSF--  140 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~--  140 (188)
                      ||+++.++.+||+|||+++.... ..........++..|+|||      ++.++||||||+++|||++ |..||....  
T Consensus       130 Nill~~~~~~kl~DfG~a~~~~~-~~~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~  208 (258)
T d1k2pa_         130 NCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS  208 (258)
T ss_dssp             GEEECTTCCEEECCCSSCCBCSS-SSCCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHH
T ss_pred             eEEEcCCCcEEECcchhheeccC-CCceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHH
Confidence            99999999999999999975432 2222333467888999999      6889999999999999998 788885321  


Q ss_pred             ----------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhc
Q 039565          141 ----------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQG  180 (188)
Q Consensus       141 ----------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~  180 (188)
                                ....+...+..+.+++..||+.+|++|||+++|++.|..+
T Consensus       209 ~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~di  258 (258)
T d1k2pa_         209 ETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDV  258 (258)
T ss_dssp             HHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHCC
T ss_pred             HHHHHHHhCCCCCCcccccHHHHHHHHHHccCCHhHCcCHHHHHHHhhCC
Confidence                      2233445567899999999999999999999999998653

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-43  Score=268.27  Aligned_cols=166  Identities=24%  Similarity=0.372  Sum_probs=137.3

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcC---Ccc---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQG---KEE---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~---~~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      |++++||||++++++   .+..++||||+++|+|.+++.   ...         |++.||.|||+   .+|+||||||+|
T Consensus        62 l~~l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~---~~iiHrDiKp~N  138 (288)
T d1uu3a_          62 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPEN  138 (288)
T ss_dssp             HHHCCSTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGG
T ss_pred             HHHcCCCCeeEEEEEEEECCEEEEEEEccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhcc---ccEEcCcCCccc
Confidence            567899999999999   778899999999999999882   222         99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC----
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF----  140 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~----  140 (188)
                      |+++.++.+|++|||+++...............||+.|+|||      ++.++||||+||++|+|++|..||....    
T Consensus       139 Ill~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~  218 (288)
T d1uu3a_         139 ILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI  218 (288)
T ss_dssp             EEECTTSCEEECCCTTCEECC----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             cccCCCceEEecccccceecccCCcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHH
Confidence            999999999999999998654333333344567999999999      6889999999999999999999996432    


Q ss_pred             -------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHH
Q 039565          141 -------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVV  174 (188)
Q Consensus       141 -------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~  174 (188)
                             ...++...+..+.+++..||+.||++|||++|++
T Consensus       219 ~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~  259 (288)
T d1uu3a_         219 FQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEME  259 (288)
T ss_dssp             HHHHHTTCCCCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGT
T ss_pred             HHHHHcCCCCCCccCCHHHHHHHHHHccCCHhHCcCHHHHc
Confidence                   1224445677899999999999999999999864

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-42  Score=267.26  Aligned_cols=170  Identities=22%  Similarity=0.318  Sum_probs=138.4

Q ss_pred             CcccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC---cc---------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            5 NRNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK---EE---------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~---~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      -|++++|||||+++++   +.+.++||||+++|+|.+++.+   ..         |++.||.|||+  +.+|+||||||+
T Consensus        57 il~~l~HpnIv~l~~~~~~~~~~~iVmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~--~~~IiHRDiKP~  134 (322)
T d1s9ja_          57 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPS  134 (322)
T ss_dssp             GGGGCCCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH--HHCCCCSCCSGG
T ss_pred             HHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH--hCCEEccccCHH
Confidence            3678999999999999   7889999999999999999922   22         99999999997  148999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCCCC
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFKGE  143 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~~  143 (188)
                      |||++.++.+||+|||+++....    .......||+.|+|||      ++.++||||+||++|+|++|+.||......+
T Consensus       135 NILl~~~~~vkl~DFGla~~~~~----~~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~  210 (322)
T d1s9ja_         135 NILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE  210 (322)
T ss_dssp             GEEECTTCCEEECCCCCCHHHHH----HTC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTH
T ss_pred             HeeECCCCCEEEeeCCCccccCC----CccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH
Confidence            99999999999999999985421    1233568999999999      7999999999999999999999985432110


Q ss_pred             c-------------------------------------------------------CHHHHHHHHHHHHHccCcCCCCCC
Q 039565          144 F-------------------------------------------------------DIISVEKAVEIAMASVSSKVNRRP  168 (188)
Q Consensus       144 ~-------------------------------------------------------~~~~~~~~~~l~~~cl~~~p~~Rp  168 (188)
                      .                                                       ....+..+.+++.+||+.||++||
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~  290 (322)
T d1s9ja_         211 LELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERA  290 (322)
T ss_dssp             HHHHC------------------------------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSC
T ss_pred             HHHHHHHHhcCCcccCCcccccccccccccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCc
Confidence            0                                                       001235788999999999999999


Q ss_pred             CHHHHHH--HHhhc
Q 039565          169 LMNQVVM--VREQG  180 (188)
Q Consensus       169 s~~~i~~--~l~~~  180 (188)
                      |++|+++  .+.+.
T Consensus       291 ta~e~L~Hpf~~~~  304 (322)
T d1s9ja_         291 DLKQLMVHAFIKRS  304 (322)
T ss_dssp             CHHHHHTSHHHHHH
T ss_pred             CHHHHhhCHhhCcC
Confidence            9999987  35443

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.5e-41  Score=261.08  Aligned_cols=164  Identities=21%  Similarity=0.261  Sum_probs=128.6

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      |++++|||||+++++   ++..++||||+++|+|.+++ .+..           |++.||.|||+   .+|+|||+||+|
T Consensus        61 l~~l~HpnIv~l~~~~~~~~~~~lvmE~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~---~~iiHrDiKp~N  137 (307)
T d1a06a_          61 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPEN  137 (307)
T ss_dssp             HHTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGG
T ss_pred             HHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhh---ceeeeEEecccc
Confidence            578899999999999   78899999999999999999 3322           99999999999   999999999999


Q ss_pred             EEEc---cCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC-
Q 039565           71 ILLN---EKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF-  140 (188)
Q Consensus        71 ill~---~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~-  140 (188)
                      |++.   .++.+||+|||+++...   .........||+.|+|||      ++.++|||||||++|+|++|..||.... 
T Consensus       138 il~~~~~~~~~vkl~DFG~a~~~~---~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~  214 (307)
T d1a06a_         138 LLYYSLDEDSKIMISDFGLSKMED---PGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEND  214 (307)
T ss_dssp             EEESSSSTTCCEEECCC---------------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             eeecccCCCceEEEeccceeEEcc---CCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCH
Confidence            9995   46889999999997542   222334567999999999      7899999999999999999999995421 


Q ss_pred             --------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          141 --------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       141 --------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                    ........+..+.+++..||+.||++|||++|+++
T Consensus       215 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  263 (307)
T d1a06a_         215 AKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ  263 (307)
T ss_dssp             HHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHhccCCCCCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence                          11222345678999999999999999999999988

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.1e-42  Score=263.52  Aligned_cols=173  Identities=18%  Similarity=0.245  Sum_probs=142.4

Q ss_pred             cccccCCCeeeeccc--CCccEEEEecCCCCChhhhc-CCc-c-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQ-GKE-E-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~-~~~-~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      +++++|||||+++++  .+..++++||+.+|+|.+++ .+. .           |++.||.|||+   .+|+||||||+|
T Consensus        65 l~~l~HpnIv~l~g~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~---~~iiHrDlKp~N  141 (317)
T d1xkka_          65 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARN  141 (317)
T ss_dssp             HHHCCCTTBCCEEEEEESSSEEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGG
T ss_pred             HHhCCCCCEeeEEEEEecCCeeEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHH---cCcccCcchhhc
Confidence            567899999999999  77889999999999999888 222 2           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCccccccCC--
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLSFK--  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~~~--  141 (188)
                      |+++.++.+||+|||+++...............||+.|+|||      ++.++|||||||++|||++ |..||+....  
T Consensus       142 Ill~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~  221 (317)
T d1xkka_         142 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE  221 (317)
T ss_dssp             EEEEETTEEEECCCSHHHHTTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGG
T ss_pred             ceeCCCCCeEeeccccceecccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHH
Confidence            999999999999999998654333333344457899999999      6899999999999999998 7888864321  


Q ss_pred             ----------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhcc
Q 039565          142 ----------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGS  181 (188)
Q Consensus       142 ----------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~  181 (188)
                                .+.+...+..+.+++.+||+.+|++|||+.+|++.|+.+.
T Consensus       222 ~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~  271 (317)
T d1xkka_         222 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA  271 (317)
T ss_dssp             HHHHHHHTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCCCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHH
Confidence                      2334456678999999999999999999999999987764

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=8.9e-42  Score=262.55  Aligned_cols=161  Identities=24%  Similarity=0.244  Sum_probs=136.7

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      |++++|||||+++++   ++..++|||||.+|+|..++ .+..           |++.||.|||+   .+|+||||||+|
T Consensus        69 l~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~---~~iiHrDiKp~N  145 (309)
T d1u5ra_          69 LQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGN  145 (309)
T ss_dssp             HTTCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGG
T ss_pred             HHHCCCCCEeeEEEEEEECCEEEEEEEecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcce
Confidence            678999999999999   78899999999999998776 2222           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC---------CCCccchHHHHHHHHHHHhCCccccccC-
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE---------LTEKSDVDSFEIVILEIITGILTVDLSF-  140 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe---------~~~~~di~s~G~~l~~~~~g~~p~~~~~-  140 (188)
                      |+++.++.+||+|||++....      ......||+.|+|||         ++.++|||||||++|+|++|..||.... 
T Consensus       146 ILl~~~~~~Kl~DFG~a~~~~------~~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~  219 (309)
T d1u5ra_         146 ILLSEPGLVKLGDFGSASIMA------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA  219 (309)
T ss_dssp             EEEETTTEEEECCCTTCBSSS------SBCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH
T ss_pred             EEECCCCCEEEeecccccccC------CCCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCH
Confidence            999999999999999987542      123457999999998         4678999999999999999999985321 


Q ss_pred             ------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          141 ------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       141 ------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                  ....+...+..+.+++..||+.||.+|||++++++
T Consensus       220 ~~~~~~i~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  266 (309)
T d1u5ra_         220 MSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK  266 (309)
T ss_dssp             HHHHHHHHHSCCCCCSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHCcCChhHCcCHHHHHh
Confidence                        11122345678999999999999999999999976

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-41  Score=258.70  Aligned_cols=173  Identities=21%  Similarity=0.232  Sum_probs=138.5

Q ss_pred             cccccCCCeeeeccc--CCccEEEEecCCCCChhhhcCC-----cc---------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQGK-----EE---------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~~~-----~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +++++|||||+++++  .+..++||||+++|+|..++..     ..         |++.||+|||+   .+++||||||+
T Consensus        66 l~~l~h~nIv~~~g~~~~~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~---~~ivH~DlKp~  142 (285)
T d1fmka3          66 MKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAA  142 (285)
T ss_dssp             HHHCCCTTBCCEEEEECSSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGG
T ss_pred             HHhcccCCEeEEEEEEecCCeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhh---hheecccccce
Confidence            678999999999999  7789999999999999988821     11         99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccc-cc----
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTV-DL----  138 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~-~~----  138 (188)
                      ||+++.++.+||+|||+++... ...........|++.|+|||      ++.++||||||+++|+|++|..|+ ..    
T Consensus       143 NIll~~~~~~kl~DfGla~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~  221 (285)
T d1fmka3         143 NILVGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR  221 (285)
T ss_dssp             GEEECGGGCEEECCCCTTC---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH
T ss_pred             EEEECCCCcEEEcccchhhhcc-CCCceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHH
Confidence            9999999999999999997643 12222233457889999999      789999999999999999966443 21    


Q ss_pred             --------cCCCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          139 --------SFKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       139 --------~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                              ....+.+...++++.+++.+||+.+|++|||+++|+++|+....
T Consensus       222 ~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~  273 (285)
T d1fmka3         222 EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  273 (285)
T ss_dssp             HHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred             HHHHHHHhcCCCCCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhc
Confidence                    11233455667789999999999999999999999999987654

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-41  Score=256.62  Aligned_cols=172  Identities=19%  Similarity=0.194  Sum_probs=140.6

Q ss_pred             cccccCCCeeeeccc--CCccEEEEecCCCCChhhhc-CCc---c---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK--QKNNALELGFRGNPELVDQQ-GKE---E---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--~~~~~lv~e~~~~~~L~~~~-~~~---~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      |.+++||||++++|+  .+..++||||+++|++.+++ .+.   .         |++.||.|||+   .+|+||||||+|
T Consensus        65 l~~l~H~nIv~~~g~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~---~~iiHrDikp~N  141 (273)
T d1u46a_          65 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARN  141 (273)
T ss_dssp             HHHCCCTTBCCEEEEECSSSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGG
T ss_pred             HHhCCCCCEEEEEEEEeecchheeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhh---CCEeeeeecHHH
Confidence            678899999999999  77789999999999999887 222   1         99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCc-ceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCcccccc---
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTH-MSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLS---  139 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~---  139 (188)
                      |+++.++.+||+|||+++......... ......++..|+|||      ++.++||||||+++|||++ |..||...   
T Consensus       142 Ill~~~~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~  221 (273)
T d1u46a_         142 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS  221 (273)
T ss_dssp             EEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH
T ss_pred             hccccccceeeccchhhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHH
Confidence            999999999999999998653222221 122345777899999      6888999999999999998 89988422   


Q ss_pred             ----------CCCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhc
Q 039565          140 ----------FKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQG  180 (188)
Q Consensus       140 ----------~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~  180 (188)
                                ...+.+...+..+.+++..||+.||++||||++|++.|++.
T Consensus       222 ~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         222 QILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             HHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence                      12233445567899999999999999999999999999875

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-41  Score=258.35  Aligned_cols=170  Identities=21%  Similarity=0.184  Sum_probs=135.5

Q ss_pred             cCCCeeeeccc----CCccEEEEecCCCCChhhhc-CC-c-----------------c---------cHHHHHHHHhcCC
Q 039565           10 TGPLLVELIGK----QKNNALELGFRGNPELVDQQ-GK-E-----------------E---------VCCPGLEYLHQGL   57 (188)
Q Consensus        10 ~Hpniv~~~~~----~~~~~lv~e~~~~~~L~~~~-~~-~-----------------~---------~i~~~l~~Lh~~~   57 (188)
                      +||||++++++    ....+++|||+++|+|.+++ .+ .                 .         |++.||.|||+  
T Consensus        75 ~h~~iv~~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~--  152 (299)
T d1ywna1          75 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS--  152 (299)
T ss_dssp             CCTTBCCEEEEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHH--
T ss_pred             CCCeEEEeeeeeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHh--
Confidence            68999999888    55689999999999999998 21 1                 1         99999999999  


Q ss_pred             CCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh
Q 039565           58 KHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT  131 (188)
Q Consensus        58 ~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~  131 (188)
                       .+|+||||||+||+++.++.+||+|||+++...............||+.|+|||      ++.++|||||||++|+|++
T Consensus       153 -~~ivHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt  231 (299)
T d1ywna1         153 -RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS  231 (299)
T ss_dssp             -TTCCCSCCCGGGEEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred             -CCCcCCcCCccceeECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHh
Confidence             999999999999999999999999999998654333333344567899999999      7899999999999999998


Q ss_pred             CC-ccccccC-------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          132 GI-LTVDLSF-------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       132 g~-~p~~~~~-------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                      +. .||....             ....+...+..+.+++.+||+.||++|||+++|+++|+++.+
T Consensus       232 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq  296 (299)
T d1ywna1         232 LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  296 (299)
T ss_dssp             TSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence            75 5664322             122334456789999999999999999999999999998754

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-41  Score=258.53  Aligned_cols=176  Identities=20%  Similarity=0.252  Sum_probs=144.2

Q ss_pred             cccccCCCeeeeccc----CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK----QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~----~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      |++++||||++++|+    +...++||||+++|+|.+++ ....            |++.||.|||+   .+|+||||||
T Consensus        82 l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~---~~iiHrDLK~  158 (311)
T d1r0pa_          82 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAA  158 (311)
T ss_dssp             HHTCCCTTBCCCCEEEEETTTEEEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSG
T ss_pred             HHhCCCCCEeEEeEEEEecCCceEEEEEEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcc---cCcccCCccH
Confidence            578999999999998    45789999999999999988 2222            99999999999   9999999999


Q ss_pred             CcEEEccCCceEEecccCcccccCCCCC--cceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           69 TNILLNEKVQAKLADFGQSRISPVEGGT--HMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        69 ~nill~~~~~~kl~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      +||++++++.+||+|||+++........  .......|+..|++||      ++.++||||||+++|||++|..||....
T Consensus       159 ~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~  238 (311)
T d1r0pa_         159 RNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV  238 (311)
T ss_dssp             GGEEECTTCCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC--
T ss_pred             HhEeECCCCCEEEecccchhhccccccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCC
Confidence            9999999999999999999864322111  1222356888999999      7889999999999999999877664321


Q ss_pred             -------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCcc
Q 039565          141 -------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGSR  184 (188)
Q Consensus       141 -------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~~  184 (188)
                                   ....+...+..+.+++..||+.||++||||.||++.|+++..+.
T Consensus       239 ~~~~~~~~i~~g~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~~  295 (311)
T d1r0pa_         239 NTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF  295 (311)
T ss_dssp             ----CHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred             CHHHHHHHHHcCCCCCCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHhh
Confidence                         11233345678999999999999999999999999999886553

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-41  Score=255.70  Aligned_cols=170  Identities=24%  Similarity=0.285  Sum_probs=136.7

Q ss_pred             cccccCCCeeeeccc----CCccEEEEecCCCCChhhhc-CCc----c---------cHHHHHHHHhcCCCCCcEEeCCC
Q 039565            6 RNKLTGPLLVELIGK----QKNNALELGFRGNPELVDQQ-GKE----E---------VCCPGLEYLHQGLKHPIIQRDMK   67 (188)
Q Consensus         6 l~~l~Hpniv~~~~~----~~~~~lv~e~~~~~~L~~~~-~~~----~---------~i~~~l~~Lh~~~~~~i~h~dl~   67 (188)
                      +++++||||++++|+    .+..++||||+++|+|.+++ .+.    .         |++.||.|||+   .+++|||||
T Consensus        54 l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~---~~ivH~dlk  130 (262)
T d1byga_          54 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLA  130 (262)
T ss_dssp             HTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCS
T ss_pred             HHhCCCCCEeeEEEEEEecCCcEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhcccccc---Cceeccccc
Confidence            678899999999997    35689999999999999998 221    1         99999999999   999999999


Q ss_pred             CCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHh-CCcccccc-
Q 039565           68 STNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIIT-GILTVDLS-  139 (188)
Q Consensus        68 ~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~-g~~p~~~~-  139 (188)
                      |+||+++.++.+|++|||+++....     ......++..|+|||      ++.++||||||+++|||++ |..||... 
T Consensus       131 p~Nil~~~~~~~kl~dfg~s~~~~~-----~~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~  205 (262)
T d1byga_         131 ARNVLVSEDNVAKVSDFGLTKEASS-----TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP  205 (262)
T ss_dssp             GGGEEECTTSCEEECCCCC-----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC
T ss_pred             hHhheecCCCCEeecccccceecCC-----CCccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCC
Confidence            9999999999999999999875321     122345677899998      7899999999999999998 67776432 


Q ss_pred             -----------CCCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          140 -----------FKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       140 -----------~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                                 ...+.+...+..+.+++.+||+.||++||||.+|+++|++++..
T Consensus       206 ~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~~~  260 (262)
T d1byga_         206 LKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH  260 (262)
T ss_dssp             GGGHHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHhC
Confidence                       12334455667899999999999999999999999999987654

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.1e-41  Score=258.83  Aligned_cols=175  Identities=19%  Similarity=0.187  Sum_probs=144.0

Q ss_pred             CcccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc--------------------------c---------c
Q 039565            5 NRNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE--------------------------E---------V   45 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~--------------------------~---------~   45 (188)
                      .|++++||||++++++   ....++++||+++|+|.+++ ...                          .         |
T Consensus        69 il~~l~h~niv~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~q  148 (301)
T d1lufa_          69 LMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQ  148 (301)
T ss_dssp             HHHTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHH
T ss_pred             HHHhcCCCCcccceeeeccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHH
Confidence            3678999999999998   78999999999999999988 211                          0         9


Q ss_pred             HHHHHHHHhcCCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccch
Q 039565           46 CCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDV  119 (188)
Q Consensus        46 i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di  119 (188)
                      ++.||+|||+   .+++||||||+||+++.++.+||+|||+++...............++..|+|||      ++.++||
T Consensus       149 i~~gl~ylH~---~~ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDV  225 (301)
T d1lufa_         149 VAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDV  225 (301)
T ss_dssp             HHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHH
T ss_pred             HHHHhhhccc---CCeEeeEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhh
Confidence            9999999999   999999999999999999999999999997553222222334566888999999      7899999


Q ss_pred             HHHHHHHHHHHhCC-ccccccC------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccC
Q 039565          120 DSFEIVILEIITGI-LTVDLSF------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSG  182 (188)
Q Consensus       120 ~s~G~~l~~~~~g~-~p~~~~~------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~  182 (188)
                      |||||++|||++|. .||....            ..+.+...+..+.+++..||+.+|++||||.+|+++|+++.+
T Consensus       226 wS~Gvvl~ell~~~~~p~~~~~~~e~~~~v~~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~~  301 (301)
T d1lufa_         226 WAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE  301 (301)
T ss_dssp             HHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             ccchhhHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence            99999999999986 4564221            122344566789999999999999999999999999998753

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-40  Score=255.28  Aligned_cols=172  Identities=20%  Similarity=0.234  Sum_probs=144.4

Q ss_pred             ccc-cCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc------------------c---------cHHHHHHHHh
Q 039565            7 NKL-TGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE------------------E---------VCCPGLEYLH   54 (188)
Q Consensus         7 ~~l-~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~------------------~---------~i~~~l~~Lh   54 (188)
                      .++ +|||||+++++   +...++||||+++|+|.+++ .+.                  .         |++.||.|||
T Consensus        73 ~~~~~HpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH  152 (299)
T d1fgka_          73 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA  152 (299)
T ss_dssp             HHHCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhcCCCeEEecccccccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhh
Confidence            345 79999999999   77899999999999999999 221                  1         9999999999


Q ss_pred             cCCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHH
Q 039565           55 QGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILE  128 (188)
Q Consensus        55 ~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~  128 (188)
                      +   .+++||||||+||+++.++.+||+|||+++...............+++.|+|||      ++.++||||||+++|+
T Consensus       153 ~---~~ivHrDiKp~NiLl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~e  229 (299)
T d1fgka_         153 S---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWE  229 (299)
T ss_dssp             H---TTCCCSCCSGGGEEECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             h---CCEEeeeecccceeecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHH
Confidence            9   999999999999999999999999999998654333333344567888999998      7899999999999999


Q ss_pred             HHh-CCcccccc------------CCCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhcc
Q 039565          129 IIT-GILTVDLS------------FKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGS  181 (188)
Q Consensus       129 ~~~-g~~p~~~~------------~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~  181 (188)
                      |++ |..||...            ...+.+...+..+.+++.+||+.+|++|||+++|++.|+++.
T Consensus       230 ll~~g~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~  295 (299)
T d1fgka_         230 IFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV  295 (299)
T ss_dssp             HHTTSCCSSTTCCHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hccCCCCCCCCCCHHHHHHHHHcCCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHh
Confidence            998 67777432            122334455678999999999999999999999999998763

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=2e-40  Score=259.06  Aligned_cols=164  Identities=20%  Similarity=0.292  Sum_probs=139.2

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc-c-----------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE-E-----------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~-~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      |++++|||||+++++   ++..++||||+++|+|.+++ .+. .           |++.||.|||+   .+|+||||||+
T Consensus        80 l~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~---~~iiHRDiKp~  156 (352)
T d1koba_          80 MNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPE  156 (352)
T ss_dssp             HTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGG
T ss_pred             HHhCCCCCCCcEEEEEEECCEEEEEEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccccc
Confidence            578899999999999   78889999999999999887 322 1           99999999999   99999999999


Q ss_pred             cEEEc--cCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC-
Q 039565           70 NILLN--EKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF-  140 (188)
Q Consensus        70 nill~--~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~-  140 (188)
                      |||++  .++.+||+|||++....   .........|++.|+|||      ++.++||||+||++|+|++|..||.... 
T Consensus       157 NILl~~~~~~~vkL~DFGla~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~  233 (352)
T d1koba_         157 NIMCETKKASSVKIIDFGLATKLN---PDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD  233 (352)
T ss_dssp             GEEESSTTCCCEEECCCTTCEECC---TTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH
T ss_pred             cccccccCCCeEEEeecccceecC---CCCceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH
Confidence            99998  56899999999998653   223345568899999998      6889999999999999999999995421 


Q ss_pred             --------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          141 --------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       141 --------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                    ........+..+.+++..||+.||.+|||++++++
T Consensus       234 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  282 (352)
T d1koba_         234 LETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE  282 (352)
T ss_dssp             HHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                          12222345678899999999999999999999987

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=2.5e-40  Score=258.36  Aligned_cols=165  Identities=20%  Similarity=0.248  Sum_probs=139.5

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      |++++|||||+++++   .+..++||||+++|+|.+++ ++.+            |++.||.|||+   .+++||||||+
T Consensus        77 l~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~---~~iiHrDiKp~  153 (350)
T d1koaa2          77 MSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPE  153 (350)
T ss_dssp             HHHTCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGG
T ss_pred             HHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh---cCCeeeeechh
Confidence            578899999999999   88999999999999999988 3322            99999999999   99999999999


Q ss_pred             cEEEcc--CCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC
Q 039565           70 NILLNE--KVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK  141 (188)
Q Consensus        70 nill~~--~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~  141 (188)
                      ||+++.  ++.+||+|||+++...   .........||+.|+|||      ++.++|||||||++|+|++|..||.....
T Consensus       154 NIll~~~~~~~vkL~DFG~a~~~~---~~~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~  230 (350)
T d1koaa2         154 NIMFTTKRSNELKLIDFGLTAHLD---PKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND  230 (350)
T ss_dssp             GEEESSTTSCCEEECCCTTCEECC---TTSCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             HeeeccCCCCeEEEeecchheecc---cccccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCH
Confidence            999964  5789999999998643   223345678999999999      57899999999999999999999964321


Q ss_pred             ---------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          142 ---------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       142 ---------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                                     .......+..+.+++.+||+.||++|||++|+++.
T Consensus       231 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  280 (350)
T d1koaa2         231 DETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH  280 (350)
T ss_dssp             HHHHHHHHHTCCCSCCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred             HHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                           11112346788999999999999999999999883

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-40  Score=258.00  Aligned_cols=165  Identities=20%  Similarity=0.260  Sum_probs=140.5

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC---cc---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK---EE---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~---~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      |++++||||++++++   .+..++||||+++|+|..++.+   ..         |++.||+|||+   .+|+||||||+|
T Consensus        59 l~~l~hp~Iv~l~~~~~~~~~~~iv~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~---~~iiHRDlKP~N  135 (337)
T d1o6la_          59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLEN  135 (337)
T ss_dssp             HHSCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGG
T ss_pred             HHhCCCCCEEEEEeeeccccccccceeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhh---cCccccccCHHH
Confidence            577899999999998   7889999999999999999922   22         99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC---
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK---  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~---  141 (188)
                      |+++.+|.+||+|||+++...  ..........||+.|+|||      ++.++|+||+||++|+|++|..||.....   
T Consensus       136 ILl~~~g~vkl~DFG~a~~~~--~~~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~  213 (337)
T d1o6la_         136 LMLDKDGHIKITDFGLCKEGI--SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL  213 (337)
T ss_dssp             EEECTTSCEEECCCTTCBCSC--CTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             eEecCCCCEEEeecccccccc--cCCcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHH
Confidence            999999999999999998543  2222345678999999999      68999999999999999999999854321   


Q ss_pred             --------CCcCHHHHHHHHHHHHHccCcCCCCCCC-----HHHHHH
Q 039565          142 --------GEFDIISVEKAVEIAMASVSSKVNRRPL-----MNQVVM  175 (188)
Q Consensus       142 --------~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~i~~  175 (188)
                              ..++...+..+.+++.+||+.||.+||+     ++++++
T Consensus       214 ~~~i~~~~~~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~  260 (337)
T d1o6la_         214 FELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             HHHHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             HHHHhcCCCCCCccCCHHHHHHHHhhccCCchhhcccccccHHHHHc
Confidence                    2234456678899999999999999995     788876

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2.2e-40  Score=260.00  Aligned_cols=163  Identities=19%  Similarity=0.218  Sum_probs=138.1

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCC---cc---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGK---EE---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~---~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      ++.++|||||+++++   .+..++||||+++|+|.+++.+   ..         |++.||.|||+   .+++||||||+|
T Consensus        61 l~~~~hpnIv~l~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~---~~iiHrDlKP~N  137 (364)
T d1omwa3          61 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPAN  137 (364)
T ss_dssp             HSSSCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGG
T ss_pred             HhcCCCCcEEEEEEEEEECCEEEEEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHH---CCccceeeccce
Confidence            456789999999998   7889999999999999999822   11         99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCCC-
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFKG-  142 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~-  142 (188)
                      ||++.++.+||+|||+++....    .......||+.|+|||       ++.++|||||||++|+|++|..||...... 
T Consensus       138 ILl~~~g~iKl~DFGla~~~~~----~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~  213 (364)
T d1omwa3         138 ILLDEHGHVRISDLGLACDFSK----KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD  213 (364)
T ss_dssp             EEECSSSCEEECCCTTCEECSS----SCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSC
T ss_pred             eEEcCCCcEEEeeeceeeecCC----CcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHH
Confidence            9999999999999999985431    1234467999999999       578999999999999999999999643221 


Q ss_pred             -------------CcCHHHHHHHHHHHHHccCcCCCCCCC-----HHHHHH
Q 039565          143 -------------EFDIISVEKAVEIAMASVSSKVNRRPL-----MNQVVM  175 (188)
Q Consensus       143 -------------~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~i~~  175 (188)
                                   ..+...+..+.+++..||+.||++|||     ++++++
T Consensus       214 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~  264 (364)
T d1omwa3         214 KHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  264 (364)
T ss_dssp             HHHHHHHSSSCCCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred             HHHHHHhcccCCCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHc
Confidence                         123345678999999999999999999     688875

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-40  Score=255.78  Aligned_cols=179  Identities=18%  Similarity=0.188  Sum_probs=140.0

Q ss_pred             CcccccCCCeeeeccc---C----CccEEEEecCCCCChhhhcC--Ccc---------cHHHHHHHHhcCC-----CCCc
Q 039565            5 NRNKLTGPLLVELIGK---Q----KNNALELGFRGNPELVDQQG--KEE---------VCCPGLEYLHQGL-----KHPI   61 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~---~----~~~~lv~e~~~~~~L~~~~~--~~~---------~i~~~l~~Lh~~~-----~~~i   61 (188)
                      .+.+++||||++++++   .    ...++||||+++|+|.++++  ...         |++.||.|+|+..     ..+|
T Consensus        50 ~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~I  129 (303)
T d1vjya_          50 QTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAI  129 (303)
T ss_dssp             TSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEE
T ss_pred             HHhhCCCCcCcceEEEEEeCCCcceEEEEEEecccCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCe
Confidence            4567899999999999   1    25789999999999999993  222         9999999999621     2599


Q ss_pred             EEeCCCCCcEEEccCCceEEecccCcccccCCCCCc--ceeeecccccccCCCC------------CCccchHHHHHHHH
Q 039565           62 IQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTH--MSTTIAGTAGFLNTEL------------TEKSDVDSFEIVIL  127 (188)
Q Consensus        62 ~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~--~~~~~~~~~~~~~pe~------------~~~~di~s~G~~l~  127 (188)
                      +||||||+||+++.++.+||+|||+++.........  ......||+.|+|||.            +.++|||||||++|
T Consensus       130 vHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~  209 (303)
T d1vjya_         130 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW  209 (303)
T ss_dssp             ECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHH
T ss_pred             eccccCccceEEcCCCCeEEEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHH
Confidence            999999999999999999999999998654222211  2234679999999982            44789999999999


Q ss_pred             HHHhCCccccccC----------------------------CCCc-----CHHHHHHHHHHHHHccCcCCCCCCCHHHHH
Q 039565          128 EIITGILTVDLSF----------------------------KGEF-----DIISVEKAVEIAMASVSSKVNRRPLMNQVV  174 (188)
Q Consensus       128 ~~~~g~~p~~~~~----------------------------~~~~-----~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~  174 (188)
                      ||++|..|+....                            ....     +...+..+.+++.+||+.||++|||+.||+
T Consensus       210 el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~  289 (303)
T d1vjya_         210 EIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIK  289 (303)
T ss_dssp             HHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHH
T ss_pred             HHhhCCCCCCcccccccchhhcccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHH
Confidence            9999986652110                            0011     123556799999999999999999999999


Q ss_pred             HHHhhccCc
Q 039565          175 MVREQGSGS  183 (188)
Q Consensus       175 ~~l~~~~~~  183 (188)
                      +.|+++.++
T Consensus       290 ~~L~~i~~~  298 (303)
T d1vjya_         290 KTLSQLSQQ  298 (303)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHh
Confidence            999987754

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-40  Score=254.40  Aligned_cols=176  Identities=17%  Similarity=0.159  Sum_probs=146.8

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCc-------------c---------cHHHHHHHHhcCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKE-------------E---------VCCPGLEYLHQGLKHP   60 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~-------------~---------~i~~~l~~Lh~~~~~~   60 (188)
                      +.+++||||++++++   .+..++||||+++|+|.+++...             .         |++.||.|||+   .+
T Consensus        77 l~~l~h~nIv~~~~~~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~---~~  153 (308)
T d1p4oa_          77 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NK  153 (308)
T ss_dssp             GGGCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TT
T ss_pred             HHHcCCCCEeeeeeEEecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhh---CC
Confidence            678999999999999   78899999999999999987211             0         99999999999   99


Q ss_pred             cEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCC-
Q 039565           61 IIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGI-  133 (188)
Q Consensus        61 i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~-  133 (188)
                      |+||||||+|||++.++.+||+|||+++...............+++.|++||      ++.++|+||||+++|||++|. 
T Consensus       154 ivHrDlk~~NiLld~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~  233 (308)
T d1p4oa_         154 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE  233 (308)
T ss_dssp             CBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSC
T ss_pred             eeeceEcCCceeecCCceEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCC
Confidence            9999999999999999999999999998654333333334457889999998      688999999999999999985 


Q ss_pred             ccccccC------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCcc
Q 039565          134 LTVDLSF------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGSR  184 (188)
Q Consensus       134 ~p~~~~~------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~~  184 (188)
                      .||....            ..+.+...+..+.+++..||+.+|++|||+++|+++|++..+..
T Consensus       234 ~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~~  296 (308)
T d1p4oa_         234 QPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG  296 (308)
T ss_dssp             CTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTT
T ss_pred             CCCCCCCHHHHHHHHHhCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence            6664211            12233455678999999999999999999999999999887654

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-40  Score=255.18  Aligned_cols=172  Identities=24%  Similarity=0.285  Sum_probs=140.9

Q ss_pred             cccc-cCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc------------------c---------cHHHHHHHH
Q 039565            6 RNKL-TGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE------------------E---------VCCPGLEYL   53 (188)
Q Consensus         6 l~~l-~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~------------------~---------~i~~~l~~L   53 (188)
                      |+++ +|||||+++++   .+..++||||+++|+|.+++ .+.                  .         |++.||.||
T Consensus        64 l~~l~~HpnIv~~~~~~~~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~l  143 (309)
T d1fvra_          64 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL  143 (309)
T ss_dssp             HTTCCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHH
T ss_pred             HHhccCCCCEeeEEEEEecCCeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhh
Confidence            4566 79999999999   78899999999999999998 321                  0         999999999


Q ss_pred             hcCCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHH
Q 039565           54 HQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVIL  127 (188)
Q Consensus        54 h~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~  127 (188)
                      |+   .+++|||+||+||+++.++.+||+|||+++...   .........|+..|++||      ++.++||||||+++|
T Consensus       144 H~---~~iiHrDlkp~NIL~~~~~~~kl~DfG~a~~~~---~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~  217 (309)
T d1fvra_         144 SQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQE---VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLW  217 (309)
T ss_dssp             HH---TTEECSCCSGGGEEECGGGCEEECCTTCEESSC---EECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHH
T ss_pred             hc---CCccccccccceEEEcCCCceEEcccccccccc---ccccccceecCCcccchHHhccCCCCccceeehhHHHHH
Confidence            99   999999999999999999999999999987532   112223456888999999      688999999999999


Q ss_pred             HHHhCC-cccccc------------CCCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhccCc
Q 039565          128 EIITGI-LTVDLS------------FKGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGSGS  183 (188)
Q Consensus       128 ~~~~g~-~p~~~~------------~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~~~  183 (188)
                      +|++|. .||...            ...+.+...+..+.+++.+||+.+|++||||++|++.|+++.+.
T Consensus       218 ell~~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~  286 (309)
T d1fvra_         218 EIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE  286 (309)
T ss_dssp             HHHTTSCCTTTTCCHHHHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             HHHhcCCCCCCCCCHHHHHHHHHhcCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence            999976 456321            12233445678899999999999999999999999999886543

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-40  Score=253.50  Aligned_cols=172  Identities=20%  Similarity=0.212  Sum_probs=142.0

Q ss_pred             ccc-cCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCc--------------------c---------cHHHHHHH
Q 039565            7 NKL-TGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE--------------------E---------VCCPGLEY   52 (188)
Q Consensus         7 ~~l-~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~--------------------~---------~i~~~l~~   52 (188)
                      +++ +|||||+++++   ....+++|||+++|+|.+++ ...                    .         |++.||.|
T Consensus        81 ~~l~~HpnIv~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~  160 (311)
T d1t46a_          81 SYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAF  160 (311)
T ss_dssp             HHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHH
T ss_pred             HhccCCCCEEEEEEEEeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHH
Confidence            345 69999999999   77899999999999999998 211                    0         99999999


Q ss_pred             HhcCCCCCcEEeCCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHH
Q 039565           53 LHQGLKHPIIQRDMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVI  126 (188)
Q Consensus        53 Lh~~~~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l  126 (188)
                      ||+   .+++||||||+||+++.++.++++|||.++...............|++.|+|||      ++.++||||||+++
T Consensus       161 LH~---~~ivHrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l  237 (311)
T d1t46a_         161 LAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFL  237 (311)
T ss_dssp             HHH---TTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred             HHh---CCeeecccccccccccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHH
Confidence            999   999999999999999999999999999998654333333344567899999999      68999999999999


Q ss_pred             HHHHhC-CccccccC-------------CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhcc
Q 039565          127 LEIITG-ILTVDLSF-------------KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGS  181 (188)
Q Consensus       127 ~~~~~g-~~p~~~~~-------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~  181 (188)
                      |+|+++ ..|+....             ....+...+..+.+++.+||+.||++||||++|+++|++..
T Consensus       238 ~ellt~g~p~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i  306 (311)
T d1t46a_         238 WELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI  306 (311)
T ss_dssp             HHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhh
Confidence            999985 45443221             12233445678999999999999999999999999998653

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-40  Score=253.04  Aligned_cols=164  Identities=22%  Similarity=0.249  Sum_probs=137.2

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CC--cc---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GK--EE---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~--~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      |++++|||||+++++   .++.++||||+++|+|.+++ .+  ..         |++.||.|||+   .+++|||+||+|
T Consensus        67 l~~l~HpnIv~~~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~---~~ivHrDiKp~N  143 (293)
T d1jksa_          67 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPEN  143 (293)
T ss_dssp             HHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGG
T ss_pred             HHhCCCCCCCcEEEEEEECCEEEEEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhh---cceeecccccce
Confidence            567899999999999   88899999999999999998 22  22         99999999999   999999999999


Q ss_pred             EEEccCC----ceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           71 ILLNEKV----QAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        71 ill~~~~----~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      |+++.++    .+|++|||++....   .........|++.|+|||      ++.++|||||||++|+|++|..||....
T Consensus       144 ill~~~~~~~~~vkl~DfG~a~~~~---~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~  220 (293)
T d1jksa_         144 IMLLDRNVPKPRIKIIDFGLAHKID---FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT  220 (293)
T ss_dssp             EEESCSSSSSCCEEECCCTTCEECT---TSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             EEEecCCCcccceEecchhhhhhcC---CCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCC
Confidence            9998766    59999999987643   122334567889999999      6899999999999999999999996432


Q ss_pred             C-----------CCcC----HHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          141 K-----------GEFD----IISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       141 ~-----------~~~~----~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      .           ...+    ...+..+.+++.+||+.||++|||++++++
T Consensus       221 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  270 (293)
T d1jksa_         221 KQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  270 (293)
T ss_dssp             HHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            1           1112    123567889999999999999999999987

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=5.4e-40  Score=253.31  Aligned_cols=162  Identities=25%  Similarity=0.388  Sum_probs=139.3

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      |++++||||++++++   ++..++||||+++|+|..++ ....           |++.||.|||+   .+|+||||||+|
T Consensus        58 l~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~iiHrDiKp~N  134 (316)
T d1fota_          58 LSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPEN  134 (316)
T ss_dssp             HHSCCBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGG
T ss_pred             HHhccCcChhheeeeEeeCCeeeeEeeecCCccccccccccccccccHHHHHHHHHHHhhhhhcc---CcEEccccCchh
Confidence            567899999999999   88899999999999999998 2222           99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccC----
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSF----  140 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~----  140 (188)
                      |+++.++.+||+|||+++....     ......||+.|+|||      ++.++||||+||++|+|++|..||....    
T Consensus       135 ILl~~~g~vkL~DFG~a~~~~~-----~~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~  209 (316)
T d1fota_         135 ILLDKNGHIKITDFGFAKYVPD-----VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT  209 (316)
T ss_dssp             EEECTTSCEEECCCSSCEECSS-----CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred             eeEcCCCCEEEecCccceEecc-----ccccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHH
Confidence            9999999999999999986431     233568999999999      6889999999999999999999996432    


Q ss_pred             -------CCCcCHHHHHHHHHHHHHccCcCCCCCC-----CHHHHHH
Q 039565          141 -------KGEFDIISVEKAVEIAMASVSSKVNRRP-----LMNQVVM  175 (188)
Q Consensus       141 -------~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~i~~  175 (188)
                             ....+...+..+.+++.+||+.+|.+|+     |++++++
T Consensus       210 ~~~i~~~~~~~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~  256 (316)
T d1fota_         210 YEKILNAELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  256 (316)
T ss_dssp             HHHHHHCCCCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             HHHHHcCCCCCCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHc
Confidence                   1223445567899999999999999996     8999886

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=7.8e-40  Score=248.15  Aligned_cols=164  Identities=20%  Similarity=0.214  Sum_probs=137.8

Q ss_pred             ccccc-CCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLT-GPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~-Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      +++++ ||||++++++   +++.++||||+++|+|.+++ .+..           |++.||+|||+   .+++||||||+
T Consensus        63 l~~l~~hpnIv~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~  139 (277)
T d1phka_          63 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPE  139 (277)
T ss_dssp             HHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGG
T ss_pred             HHHhcCCCCeEEEEeecccCcceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---cCCcccccccc
Confidence            44565 9999999999   88889999999999999999 2222           99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------------CCCccchHHHHHHHHHHHhCCcccc
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------------LTEKSDVDSFEIVILEIITGILTVD  137 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------------~~~~~di~s~G~~l~~~~~g~~p~~  137 (188)
                      ||+++.++.+||+|||+++....   ........||+.|++||            ++.++||||+||++|+|++|..||.
T Consensus       140 Nill~~~~~~kl~DFG~a~~~~~---~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~  216 (277)
T d1phka_         140 NILLDDDMNIKLTDFGFSCQLDP---GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFW  216 (277)
T ss_dssp             GEEECTTCCEEECCCTTCEECCT---TCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             eEEEcCCCCeEEccchheeEccC---CCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCC
Confidence            99999999999999999986432   22234467889999988            3678999999999999999999996


Q ss_pred             ccCC---------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          138 LSFK---------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       138 ~~~~---------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ....               .......++.+.+++.+||+.+|++|||++++++
T Consensus       217 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~  269 (277)
T d1phka_         217 HRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  269 (277)
T ss_dssp             CSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             CCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            4321               1122356678999999999999999999999876

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-39  Score=252.14  Aligned_cols=162  Identities=19%  Similarity=0.242  Sum_probs=134.8

Q ss_pred             cccCCCeeeeccc-------CCccEEEEecCCCCChhhhc-CCc--c-----------cHHHHHHHHhcCCCCCcEEeCC
Q 039565            8 KLTGPLLVELIGK-------QKNNALELGFRGNPELVDQQ-GKE--E-----------VCCPGLEYLHQGLKHPIIQRDM   66 (188)
Q Consensus         8 ~l~Hpniv~~~~~-------~~~~~lv~e~~~~~~L~~~~-~~~--~-----------~i~~~l~~Lh~~~~~~i~h~dl   66 (188)
                      ..+|||||+++++       ....++|||||++|+|.+++ ++.  .           |++.||+|||+   .+|+||||
T Consensus        61 ~~~hpnIv~l~~~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~---~~iiHRDi  137 (335)
T d2ozaa1          61 ASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDV  137 (335)
T ss_dssp             HTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCC
T ss_pred             hcCCCCCCeEEEEEeecccCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHH---cCCccccc
Confidence            3479999999987       35689999999999999999 432  1           99999999999   99999999


Q ss_pred             CCCcEEEcc---CCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCcccc
Q 039565           67 KSTNILLNE---KVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVD  137 (188)
Q Consensus        67 ~~~nill~~---~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~  137 (188)
                      ||+||+++.   .+.+|++|||+++....   ........|++.|+|||      ++.++|||||||++|+|++|..||.
T Consensus       138 Kp~NIll~~~~~~~~~Kl~DFG~a~~~~~---~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~  214 (335)
T d2ozaa1         138 KPENLLYTSKRPNAILKLTDFGFAKETTS---HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY  214 (335)
T ss_dssp             SGGGEEESCSSTTCCEEECCCTTCEECCC---CCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCE
T ss_pred             cccccccccccccccccccccceeeeccC---CCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCC
Confidence            999999986   45799999999986432   22334568999999999      5789999999999999999999995


Q ss_pred             ccCCC---------------CcC----HHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          138 LSFKG---------------EFD----IISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       138 ~~~~~---------------~~~----~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      .....               .++    ...+..+.+++..||+.||++|||++++++
T Consensus       215 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  271 (335)
T d2ozaa1         215 SNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  271 (335)
T ss_dssp             ETTCC--------CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CCCHHHHHHHHHHHHhcCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            43211               111    234678999999999999999999999987

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-39  Score=249.77  Aligned_cols=165  Identities=22%  Similarity=0.230  Sum_probs=135.5

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      |.+++|||||+++++   .++.++||||+.++++..+.....            |++.||+|||+   .+++||||||+|
T Consensus        54 l~~l~hpnIv~~~~~~~~~~~~~ivmE~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDiKp~N  130 (299)
T d1ua2a_          54 LQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNN  130 (299)
T ss_dssp             HHHCCCTTBCCEEEEECCTTCCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGG
T ss_pred             HHhCCCCCEeEEEeeeccCCceeehhhhhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhc---cceecccCCcce
Confidence            567899999999999   888999999999887777663222            99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCCC-
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFKG-  142 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~-  142 (188)
                      |+++.++.+||+|||+++.....  ........||+.|+|||       ++.++|||||||++|+|++|..||...... 
T Consensus       131 Ili~~~~~~KL~DFG~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~  208 (299)
T d1ua2a_         131 LLLDENGVLKLADFGLAKSFGSP--NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD  208 (299)
T ss_dssp             EEECTTCCEEECCCGGGSTTTSC--CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             EEecCCCccccccCccccccCCC--cccccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHH
Confidence            99999999999999999754322  22233457899999999       477899999999999999999888532100 


Q ss_pred             ---------------------------------CcC-----HHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          143 ---------------------------------EFD-----IISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       143 ---------------------------------~~~-----~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                                       ..+     ...++.+.+++.+||+.||++|||++|+++
T Consensus       209 ~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~  279 (299)
T d1ua2a_         209 QLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK  279 (299)
T ss_dssp             HHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHhcCCCChhhccchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhC
Confidence                                             000     123467899999999999999999999987

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.5e-39  Score=246.60  Aligned_cols=174  Identities=21%  Similarity=0.280  Sum_probs=135.1

Q ss_pred             cccccCCCeeeeccc---C----CccEEEEecCCCCChhhhc-C--Ccc---------cHHHHHHHHhcCCCCCcEEeCC
Q 039565            6 RNKLTGPLLVELIGK---Q----KNNALELGFRGNPELVDQQ-G--KEE---------VCCPGLEYLHQGLKHPIIQRDM   66 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~----~~~~lv~e~~~~~~L~~~~-~--~~~---------~i~~~l~~Lh~~~~~~i~h~dl   66 (188)
                      +++++||||++++++   .    ...++||||+++++|..++ .  ...         |++.||.|||+   .+++||||
T Consensus        61 l~~~~hpniv~~~~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~---~~iiHrDi  137 (277)
T d1o6ya_          61 AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQ---NGIIHRDV  137 (277)
T ss_dssp             HHTCCCTTBCCEEEEEEEECSSSEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCC
T ss_pred             HHhcCCCCCCcccceeeeccCCCceEEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHh---CCccCccc
Confidence            567899999999998   2    2378999999999999988 2  222         99999999999   99999999


Q ss_pred             CCCcEEEccCCceEEecccCcccccCCC-CCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCcccccc
Q 039565           67 KSTNILLNEKVQAKLADFGQSRISPVEG-GTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLS  139 (188)
Q Consensus        67 ~~~nill~~~~~~kl~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~  139 (188)
                      ||+||+++.++..+++|||.+....... .........||+.|+|||      ++.++|||||||++|+|++|..||...
T Consensus       138 KP~NIll~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~  217 (277)
T d1o6ya_         138 KPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD  217 (277)
T ss_dssp             SGGGEEEETTSCEEECCCTTCEECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             cCcccccCccccceeehhhhhhhhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCc
Confidence            9999999999999999999876532221 122334567999999999      688999999999999999999999643


Q ss_pred             CC---------------CCcCHHHHHHHHHHHHHccCcCCCCCC-CHHHHHHHHhhccC
Q 039565          140 FK---------------GEFDIISVEKAVEIAMASVSSKVNRRP-LMNQVVMVREQGSG  182 (188)
Q Consensus       140 ~~---------------~~~~~~~~~~~~~l~~~cl~~~p~~Rp-s~~~i~~~l~~~~~  182 (188)
                      ..               .......+..+.+++.+||+.||.+|| |++++++.|.++..
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~n  276 (277)
T d1o6ya_         218 SPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN  276 (277)
T ss_dssp             SHHHHHHHHHHCCCCCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHC
T ss_pred             CHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHhC
Confidence            21               111223467899999999999999999 89999999887643

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-39  Score=249.15  Aligned_cols=164  Identities=16%  Similarity=0.248  Sum_probs=137.8

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcC-Cc-c-----------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQG-KE-E-----------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~-~~-~-----------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      |.+++||||++++++   +++.|+|||||++|+|.+++. +. .           |++.||.|||+   .+|+||||||+
T Consensus        55 l~~l~HpnIv~~~~~~~~~~~~~lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~---~~iiHrDlKp~  131 (321)
T d1tkia_          55 LNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPE  131 (321)
T ss_dssp             HHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGG
T ss_pred             HHhCCCCCCCeEEEEEEECCEEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---cCCCccccccc
Confidence            578899999999998   889999999999999999993 22 2           99999999999   99999999999


Q ss_pred             cEEEccC--CceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC
Q 039565           70 NILLNEK--VQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK  141 (188)
Q Consensus        70 nill~~~--~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~  141 (188)
                      ||+++.+  ..+|++|||++....   .........+++.|++||      ++.++||||+||++|+|++|..||.....
T Consensus       132 NIll~~~~~~~ikl~DFG~~~~~~---~~~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~  208 (321)
T d1tkia_         132 NIIYQTRRSSTIKIIEFGQARQLK---PGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN  208 (321)
T ss_dssp             GEEESSSSCCCEEECCCTTCEECC---TTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH
T ss_pred             ceeecCCCceEEEEcccchhhccc---cCCcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCH
Confidence            9999854  578999999987542   223345567889999998      68899999999999999999999965432


Q ss_pred             C-----------CcCH----HHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 G-----------EFDI----ISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 ~-----------~~~~----~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      .           ..+.    ..+..+.+++..||..||++|||++++++
T Consensus       209 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  257 (321)
T d1tkia_         209 QQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             HHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHhCCCCCChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            1           1222    23567899999999999999999999987

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-39  Score=252.00  Aligned_cols=163  Identities=21%  Similarity=0.317  Sum_probs=137.8

Q ss_pred             cccCCCeeeeccc---CCccEEEEecCCCCChhhhcC---Ccc---------cHHHHHHHHhcCCCCCcEEeCCCCCcEE
Q 039565            8 KLTGPLLVELIGK---QKNNALELGFRGNPELVDQQG---KEE---------VCCPGLEYLHQGLKHPIIQRDMKSTNIL   72 (188)
Q Consensus         8 ~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~---~~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~nil   72 (188)
                      .++|||||+++++   ++..++||||+++|+|.+++.   ...         |++.||.|||+   .+++|||+||+|||
T Consensus        59 ~~~hp~Iv~~~~~~~~~~~~yivmEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~---~~iiHrDikp~NiL  135 (320)
T d1xjda_          59 AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNIL  135 (320)
T ss_dssp             HTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEE
T ss_pred             hCCCCcEEEEEEEEccCCceeEEEeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCccccee
Confidence            5899999999999   888999999999999999992   222         99999999999   99999999999999


Q ss_pred             EccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC-----
Q 039565           73 LNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK-----  141 (188)
Q Consensus        73 l~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~-----  141 (188)
                      ++.++.+|++|||+++....  .........||+.|+|||      ++.++|||||||++|+|++|..||.....     
T Consensus       136 ~~~~~~~kl~DFG~a~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~  213 (320)
T d1xjda_         136 LDKDGHIKIADFGMCKENML--GDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFH  213 (320)
T ss_dssp             ECTTSCEEECCCTTCBCCCC--TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             ecCCCceeccccchhhhccc--ccccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHH
Confidence            99999999999999985432  222334567999999999      68899999999999999999999964321     


Q ss_pred             ------CCcCHHHHHHHHHHHHHccCcCCCCCCCHH-HHHH
Q 039565          142 ------GEFDIISVEKAVEIAMASVSSKVNRRPLMN-QVVM  175 (188)
Q Consensus       142 ------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~-~i~~  175 (188)
                            ..++...+..+.+++.+||+.||.+|||+. ++++
T Consensus       214 ~i~~~~~~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~  254 (320)
T d1xjda_         214 SIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ  254 (320)
T ss_dssp             HHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             HHHcCCCCCCccCCHHHHHHHHHhcccCCCCCcCHHHHHHh
Confidence                  223344567899999999999999999985 6653

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.2e-38  Score=248.85  Aligned_cols=162  Identities=19%  Similarity=0.231  Sum_probs=138.4

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-C--Ccc---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-G--KEE---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~--~~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      |++++|||||+++++   ....++|+||+.+|+|..++ .  ...         |++.||.|||+   .+|+||||||+|
T Consensus        95 l~~l~hpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~---~~iiHRDIKP~N  171 (350)
T d1rdqe_          95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPEN  171 (350)
T ss_dssp             HTTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGG
T ss_pred             HHHcCCCcEeecccccccccccccccccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCcCCHHH
Confidence            578899999999998   77889999999999999998 2  222         99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC---
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK---  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~---  141 (188)
                      ||++.++.+||+|||+++....     ......||+.|+|||      ++.++|||||||++|+|++|..||.....   
T Consensus       172 ILl~~~g~ikL~DFG~a~~~~~-----~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~  246 (350)
T d1rdqe_         172 LLIDQQGYIQVTDFGFAKRVKG-----RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI  246 (350)
T ss_dssp             EEECTTSCEEECCCTTCEECSS-----CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             cccCCCCCEEeeeceeeeeccc-----ccccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHH
Confidence            9999999999999999986431     233567999999999      68899999999999999999999964321   


Q ss_pred             --------CCcCHHHHHHHHHHHHHccCcCCCCCC-----CHHHHHH
Q 039565          142 --------GEFDIISVEKAVEIAMASVSSKVNRRP-----LMNQVVM  175 (188)
Q Consensus       142 --------~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~i~~  175 (188)
                              ...+...+..+.+++..||+.||.+|+     |++++++
T Consensus       247 ~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~  293 (350)
T d1rdqe_         247 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             HHHHHHCCCCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             HHHHhcCCCCCCccCCHHHHHHHHHHhhhCHHhccccccccHHHHHc
Confidence                    123344567899999999999999994     8999886

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-38  Score=240.71  Aligned_cols=162  Identities=18%  Similarity=0.227  Sum_probs=132.8

Q ss_pred             cccc--CCCeeeeccc---CCccEEEEecCCC-CChhhhc-CC--cc---------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            7 NKLT--GPLLVELIGK---QKNNALELGFRGN-PELVDQQ-GK--EE---------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         7 ~~l~--Hpniv~~~~~---~~~~~lv~e~~~~-~~L~~~~-~~--~~---------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      ++++  |||||+++++   ++..++||||+.+ +++.+++ .+  ..         |++.||.|||+   .+|+||||||
T Consensus        62 ~~l~~~h~nIv~~~~~~~~~~~~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~---~~iiHrDiKp  138 (273)
T d1xwsa_          62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKD  138 (273)
T ss_dssp             HHHCSSSCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSG
T ss_pred             HHhccCCCCccEEEEEEeeCCeEEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCCccccCcc
Confidence            3454  9999999999   7888999999975 5777777 22  22         99999999999   9999999999


Q ss_pred             CcEEEccC-CceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccC
Q 039565           69 TNILLNEK-VQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSF  140 (188)
Q Consensus        69 ~nill~~~-~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~  140 (188)
                      +||+++.+ +.+|++|||+++....    .......||+.|+|||       .+.++||||+||++|+|++|..||....
T Consensus       139 ~NIll~~~~~~vkl~DFG~a~~~~~----~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~  214 (273)
T d1xwsa_         139 ENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE  214 (273)
T ss_dssp             GGEEEETTTTEEEECCCTTCEECCS----SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH
T ss_pred             cceEEecCCCeEEECccccceeccc----ccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch
Confidence            99999854 7899999999975421    1234567999999999       3567899999999999999999996421


Q ss_pred             -----CCCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          141 -----KGEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       141 -----~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                           ...++...+..+.+++.+||+.||++|||++|+++
T Consensus       215 ~i~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  254 (273)
T d1xwsa_         215 EIIRGQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQN  254 (273)
T ss_dssp             HHHHCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHhhcccCCCCCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence                 12233445678999999999999999999999987

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.8e-38  Score=239.76  Aligned_cols=173  Identities=20%  Similarity=0.177  Sum_probs=137.7

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhc-CCcc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQ-GKEE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      |++++|||||+++++   ..+.++||||+.++.+.... ....            |++.||.|||+   .+|+||||||+
T Consensus        55 l~~l~Hp~Iv~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~---~~IiHrDiKpe  131 (298)
T d1gz8a_          55 LKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQ  131 (298)
T ss_dssp             HTTCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGG
T ss_pred             HHhCCCCcEEEeccccccccceeEEEeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhc---CCEEccccCch
Confidence            578999999999999   88899999999865444333 2222            99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCCC
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFKG  142 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~  142 (188)
                      ||+++.++.+|++|||.++....  .........|++.|++||       .+.++|+||+||++|+|++|..||......
T Consensus       132 NIl~~~~~~~kl~DFG~a~~~~~--~~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~  209 (298)
T d1gz8a_         132 NLLINTEGAIKLADFGLARAFGV--PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI  209 (298)
T ss_dssp             GEEECTTSCEEECSTTHHHHHCC--CSBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             heeecccCcceeccCCcceeccC--CcccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHH
Confidence            99999999999999999975432  222344567889999998       478899999999999999999998532100


Q ss_pred             --------------C--------------------------cCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH--Hhhc
Q 039565          143 --------------E--------------------------FDIISVEKAVEIAMASVSSKVNRRPLMNQVVMV--REQG  180 (188)
Q Consensus       143 --------------~--------------------------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~--l~~~  180 (188)
                                    +                          .....+..+.+++.+||+.||++|||++|+++.  |+++
T Consensus       210 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~  289 (298)
T d1gz8a_         210 DQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV  289 (298)
T ss_dssp             HHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTC
T ss_pred             HHHHHHHHhcCCCchhhccccccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccC
Confidence                          0                          001224578899999999999999999999984  6665


Q ss_pred             cCc
Q 039565          181 SGS  183 (188)
Q Consensus       181 ~~~  183 (188)
                      .+.
T Consensus       290 ~~p  292 (298)
T d1gz8a_         290 TKP  292 (298)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            543

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-37  Score=238.66  Aligned_cols=164  Identities=21%  Similarity=0.210  Sum_probs=132.9

Q ss_pred             cccccCCCeeeeccc--------CCccEEEEecCCCCChhhhc-CCc-c-----------cHHHHHHHHhcCCCCCcEEe
Q 039565            6 RNKLTGPLLVELIGK--------QKNNALELGFRGNPELVDQQ-GKE-E-----------VCCPGLEYLHQGLKHPIIQR   64 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--------~~~~~lv~e~~~~~~L~~~~-~~~-~-----------~i~~~l~~Lh~~~~~~i~h~   64 (188)
                      |+.++||||++++++        ....++++||++++++.... ... .           |++.||+|||+   .+|+||
T Consensus        64 l~~~~HpnIv~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~---~~ivHr  140 (305)
T d1blxa_          64 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHR  140 (305)
T ss_dssp             HHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCC
T ss_pred             HhhcCCCCcceeeeeecccccccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCEEec
Confidence            344589999999987        24678999999987765554 221 1           99999999999   999999


Q ss_pred             CCCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccc
Q 039565           65 DMKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        65 dl~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      ||||+|||++..+.+|++|||+++...   .........||+.|+|||      ++.++||||+||++|+|++|..||..
T Consensus       141 DiKp~NILi~~~~~~kl~dfg~~~~~~---~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~  217 (305)
T d1blxa_         141 DLKPQNILVTSSGQIKLADFGLARIYS---FQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRG  217 (305)
T ss_dssp             CCCGGGEEECTTCCEEECSCCSCCCCC---GGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CCCccEEEEcCCCCeeecchhhhhhhc---ccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCC
Confidence            999999999999999999999987532   223345678999999999      78999999999999999999999854


Q ss_pred             cCCC--------------------------------------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          139 SFKG--------------------------------------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       139 ~~~~--------------------------------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                      ....                                      ......++.+.+++.+||+.||++|||++|+++
T Consensus       218 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~  292 (305)
T d1blxa_         218 SSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  292 (305)
T ss_dssp             SSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CCHHHHHHHHHHhhCCCchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            3110                                      011123457889999999999999999999987

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=3.4e-37  Score=234.52  Aligned_cols=166  Identities=19%  Similarity=0.184  Sum_probs=131.9

Q ss_pred             CcccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            5 NRNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      -|++++||||+++++.   .+..++++|++.++.+..+.....            |++.||+|||+   .+|+||||||+
T Consensus        53 il~~l~hpnIv~~~~~~~~~~~~~i~~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~IvHrDiKp~  129 (286)
T d1ob3a_          53 ILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQ  129 (286)
T ss_dssp             GGGGCCCTTBCCEEEEEECSSCEEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGG
T ss_pred             HHHhCCCCcEEeeeeecccCCceeEEEEeehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhcc---CcEEecCCCCc
Confidence            4678999999999999   888999999999877777663222            99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCC-
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFK-  141 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~-  141 (188)
                      ||+++.++.+|++|||.+......  ........+++.|++||       ++.++|+||+||++|+|++|..||..... 
T Consensus       130 NIll~~~~~~kl~DfG~a~~~~~~--~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~  207 (286)
T d1ob3a_         130 NLLINREGELKIADFGLARAFGIP--VRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA  207 (286)
T ss_dssp             GEEECTTSCEEECCTTHHHHHCC-----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             eeeEcCCCCEEecccccceecccC--ccccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHH
Confidence            999999999999999998764321  12233456788899887       58899999999999999999999853210 


Q ss_pred             ---------------------------------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 ---------------------------------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 ---------------------------------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                                             .......+..+.+++.+||+.||++|||++|+++
T Consensus       208 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         208 DQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             HHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHhhCCCChhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                                                   0011123467889999999999999999999985

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-36  Score=235.48  Aligned_cols=173  Identities=19%  Similarity=0.147  Sum_probs=133.5

Q ss_pred             cccccCCCeeeeccc---------CCccEEEEecCCCCChhhhc----CCcc-----------cHHHHHHHHhcCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---------QKNNALELGFRGNPELVDQQ----GKEE-----------VCCPGLEYLHQGLKHPI   61 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---------~~~~~lv~e~~~~~~L~~~~----~~~~-----------~i~~~l~~Lh~~~~~~i   61 (188)
                      |++++||||++++++         ..+.++||||++++.+....    ....           |++.||+|||+   .+|
T Consensus        67 l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~---~~I  143 (350)
T d1q5ka_          67 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---FGI  143 (350)
T ss_dssp             HHHCCCTTBCCEEEEEEEC--CCSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT---TTE
T ss_pred             HHhcCCCCCCcEEEEEEecCccCCceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHh---cCC
Confidence            567899999999887         22468999999976433332    1211           99999999999   999


Q ss_pred             EEeCCCCCcEEEccCC-ceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCC
Q 039565           62 IQRDMKSTNILLNEKV-QAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGI  133 (188)
Q Consensus        62 ~h~dl~~~nill~~~~-~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~  133 (188)
                      +||||||+|||++.++ .+||+|||++.....   ........|+..|++||       ++.++||||+||++|+|++|.
T Consensus       144 iHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~  220 (350)
T d1q5ka_         144 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR---GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ  220 (350)
T ss_dssp             ECCCCCGGGEEECTTTCCEEECCCTTCEECCT---TSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTS
T ss_pred             cccCCCcceEEEecCCCceeEecccchhhccC---CcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCC
Confidence            9999999999999775 899999999875431   12234467888899987       688999999999999999999


Q ss_pred             ccccccCCC----------------------------------------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHH
Q 039565          134 LTVDLSFKG----------------------------------------EFDIISVEKAVEIAMASVSSKVNRRPLMNQV  173 (188)
Q Consensus       134 ~p~~~~~~~----------------------------------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i  173 (188)
                      .||......                                        ......+..+.+++.+||+.||++|||++|+
T Consensus       221 ~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~  300 (350)
T d1q5ka_         221 PIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEA  300 (350)
T ss_dssp             CSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence            998532110                                        0111235578899999999999999999999


Q ss_pred             HH--HHhhccCcc
Q 039565          174 VM--VREQGSGSR  184 (188)
Q Consensus       174 ~~--~l~~~~~~~  184 (188)
                      ++  .|+++.+..
T Consensus       301 L~Hp~f~~~~~~~  313 (350)
T d1q5ka_         301 CAHSFFDELRDPN  313 (350)
T ss_dssp             HTSGGGGGGGCTT
T ss_pred             hcCHhhccccCCC
Confidence            97  466655443

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-36  Score=232.40  Aligned_cols=166  Identities=22%  Similarity=0.257  Sum_probs=137.2

Q ss_pred             cccccC-CCeeeeccc---CCccEEEEecCCCCChhhhc---CCcc---------cHHHHHHHHhcCCCCCcEEeCCCCC
Q 039565            6 RNKLTG-PLLVELIGK---QKNNALELGFRGNPELVDQQ---GKEE---------VCCPGLEYLHQGLKHPIIQRDMKST   69 (188)
Q Consensus         6 l~~l~H-pniv~~~~~---~~~~~lv~e~~~~~~L~~~~---~~~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~   69 (188)
                      |.+++| |||++++++   ....++++||+.+|+|.+++   ....         |++.||.|||+   .+++||||||+
T Consensus        82 l~~l~h~pnIv~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~---~~ivHrDiKp~  158 (322)
T d1vzoa_          82 LEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLE  158 (322)
T ss_dssp             HHHHHTCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGG
T ss_pred             HHhccCCCeEEEeeeeeccCCceeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhc---CCEEeccCCcc
Confidence            567767 899999988   88999999999999999998   2222         99999999999   99999999999


Q ss_pred             cEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC--------CCCccchHHHHHHHHHHHhCCccccccCC
Q 039565           70 NILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE--------LTEKSDVDSFEIVILEIITGILTVDLSFK  141 (188)
Q Consensus        70 nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe--------~~~~~di~s~G~~l~~~~~g~~p~~~~~~  141 (188)
                      ||+++.++.+||+|||+++.+. ...........|++.|++||        ++.++|||||||++|+|++|..||.....
T Consensus       159 Nill~~~~~vkL~DFG~a~~~~-~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~  237 (322)
T d1vzoa_         159 NILLDSNGHVVLTDFGLSKEFV-ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGE  237 (322)
T ss_dssp             GEEECTTSCEEESCSSEEEECC-GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTS
T ss_pred             ceeecCCCCEEEeeccchhhhc-ccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCH
Confidence            9999999999999999987543 12222334567888899887        46789999999999999999999965432


Q ss_pred             CC---------------cCHHHHHHHHHHHHHccCcCCCCCCC-----HHHHHH
Q 039565          142 GE---------------FDIISVEKAVEIAMASVSSKVNRRPL-----MNQVVM  175 (188)
Q Consensus       142 ~~---------------~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~i~~  175 (188)
                      .+               .+...+..+.+++..||+.||++|||     ++|+++
T Consensus       238 ~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~  291 (322)
T d1vzoa_         238 KNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE  291 (322)
T ss_dssp             CCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             HHHHHHHHHhcccCCCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence            22               23345678999999999999999994     788876

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-35  Score=230.84  Aligned_cols=168  Identities=18%  Similarity=0.219  Sum_probs=133.0

Q ss_pred             cccccCCCeeeeccc-------CCccEEEEecCCCCChhhhc--CCcc---------cHHHHHHHHhcCCCCCcEEeCCC
Q 039565            6 RNKLTGPLLVELIGK-------QKNNALELGFRGNPELVDQQ--GKEE---------VCCPGLEYLHQGLKHPIIQRDMK   67 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-------~~~~~lv~e~~~~~~L~~~~--~~~~---------~i~~~l~~Lh~~~~~~i~h~dl~   67 (188)
                      |.+++||||++++++       ....+++++|+.+|+|.+++  +...         |++.||+|||+   .+|+|||||
T Consensus        60 l~~l~hp~iv~~~~~~~~~~~~~~~~~~l~~~~~~g~L~~~l~~~~l~~~~i~~i~~qil~al~yLH~---~~iiHRDIK  136 (345)
T d1pmea_          60 LLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLK  136 (345)
T ss_dssp             HHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCC
T ss_pred             HHHcCCCCCCcEEEEEeeccccccceEEEEEeecCCchhhhhhcCCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCC
Confidence            567899999999988       12345666777789999999  3333         99999999999   999999999


Q ss_pred             CCcEEEccCCceEEecccCcccccCCCC-CcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCcccccc
Q 039565           68 STNILLNEKVQAKLADFGQSRISPVEGG-THMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLS  139 (188)
Q Consensus        68 ~~nill~~~~~~kl~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~  139 (188)
                      |+||+++.++.+||+|||++........ ........|++.|+|||       ++.++|+||+||++|+|++|..||+..
T Consensus       137 p~NILl~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~  216 (345)
T d1pmea_         137 PSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK  216 (345)
T ss_dssp             GGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             cceEEECCCCCEEEcccCceeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCC
Confidence            9999999999999999999875432211 12234467889999998       477899999999999999999998543


Q ss_pred             CCC-------------------------------------CcC-----HHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          140 FKG-------------------------------------EFD-----IISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       140 ~~~-------------------------------------~~~-----~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                      ...                                     ..+     ...+.++.+++.+||+.||.+|||++++++.
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h  295 (345)
T d1pmea_         217 HYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  295 (345)
T ss_dssp             SHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             CHHHHHHHHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            210                                     000     0123468899999999999999999999974

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-35  Score=229.56  Aligned_cols=167  Identities=23%  Similarity=0.222  Sum_probs=134.5

Q ss_pred             cccccCCCeeeeccc---------CCccEEEEecCCCCChhhhc--CCcc---------cHHHHHHHHhcCCCCCcEEeC
Q 039565            6 RNKLTGPLLVELIGK---------QKNNALELGFRGNPELVDQQ--GKEE---------VCCPGLEYLHQGLKHPIIQRD   65 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---------~~~~~lv~e~~~~~~L~~~~--~~~~---------~i~~~l~~Lh~~~~~~i~h~d   65 (188)
                      |++++|||||+++++         ....++||||++ .+|..++  ....         |++.||.|||+   .+|+|||
T Consensus        71 l~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~IiHrD  146 (346)
T d1cm8a_          71 LKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMG-TDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHA---AGIIHRD  146 (346)
T ss_dssp             HHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCC
T ss_pred             HHhcCCCCeeEEEEEeccCccccccceEEEEEeccc-ccHHHHHHhccccHHHHHHHHHHHHHHHHHHHh---CCCcccc
Confidence            567899999999998         225699999994 5777777  2333         99999999999   9999999


Q ss_pred             CCCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccc
Q 039565           66 MKSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDL  138 (188)
Q Consensus        66 l~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~  138 (188)
                      |||+||+++.++.+|++|||+++....     ......|++.|+|||       ++.++||||+||++|+|++|..||..
T Consensus       147 iKp~NIL~~~~~~~kl~Dfg~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~  221 (346)
T d1cm8a_         147 LKPGNLAVNEDCELKILDFGLARQADS-----EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKG  221 (346)
T ss_dssp             CCGGGEEECTTCCEEECCCTTCEECCS-----SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             cCcchhhcccccccccccccceeccCC-----ccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCC
Confidence            999999999999999999999975431     223457889999999       47899999999999999999999854


Q ss_pred             cCCC------------------------------------------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHHH
Q 039565          139 SFKG------------------------------------------EFDIISVEKAVEIAMASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       139 ~~~~------------------------------------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~  176 (188)
                      ....                                          ......+..+.+++.+||+.||.+|||++++++.
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~H  301 (346)
T d1cm8a_         222 SDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH  301 (346)
T ss_dssp             SSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             CChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            3110                                          0011224567899999999999999999999984


Q ss_pred             --Hhhcc
Q 039565          177 --REQGS  181 (188)
Q Consensus       177 --l~~~~  181 (188)
                        |+++.
T Consensus       302 p~f~~~~  308 (346)
T d1cm8a_         302 PYFESLH  308 (346)
T ss_dssp             GGGTTTC
T ss_pred             hhhCcCC
Confidence              55443

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-35  Score=228.20  Aligned_cols=167  Identities=19%  Similarity=0.148  Sum_probs=130.4

Q ss_pred             cccccCCCeeeeccc-----------CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcE
Q 039565            6 RNKLTGPLLVELIGK-----------QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPII   62 (188)
Q Consensus         6 l~~l~Hpniv~~~~~-----------~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~   62 (188)
                      |.+++||||++++++           ..+.+++|||+.++.+..+.....            |++.||.|||+   .+|+
T Consensus        63 l~~l~h~nii~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~---~~iv  139 (318)
T d3blha1          63 LQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR---NKIL  139 (318)
T ss_dssp             HHHCCCTTBCCEEEEEEC----------CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEE
T ss_pred             HHHhcCCCccceEeeeecccccccccCceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhcc---CCEE
Confidence            578999999999887           346799999999877766552222            99999999999   9999


Q ss_pred             EeCCCCCcEEEccCCceEEecccCcccccCCCC--CcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCC
Q 039565           63 QRDMKSTNILLNEKVQAKLADFGQSRISPVEGG--THMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGI  133 (188)
Q Consensus        63 h~dl~~~nill~~~~~~kl~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~  133 (188)
                      ||||||+||+++.++.+|++|||++........  ........||+.|+|||       ++.++||||+||++|+|++|+
T Consensus       140 HrDlKp~NILl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~  219 (318)
T d3blha1         140 HRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRS  219 (318)
T ss_dssp             CCCCCGGGEEECTTSCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSS
T ss_pred             ecCcCchheeecCCCcEEeeecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCC
Confidence            999999999999999999999999975432211  11223356899999999       578999999999999999999


Q ss_pred             ccccccCCCC------------------------------------cC-------HHHHHHHHHHHHHccCcCCCCCCCH
Q 039565          134 LTVDLSFKGE------------------------------------FD-------IISVEKAVEIAMASVSSKVNRRPLM  170 (188)
Q Consensus       134 ~p~~~~~~~~------------------------------------~~-------~~~~~~~~~l~~~cl~~~p~~Rps~  170 (188)
                      .||+.....+                                    ..       ......+.+++.+||+.||++|||+
T Consensus       220 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa  299 (318)
T d3blha1         220 PIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDS  299 (318)
T ss_dssp             CSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCH
T ss_pred             CCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCH
Confidence            9985321000                                    00       0113356789999999999999999


Q ss_pred             HHHHH
Q 039565          171 NQVVM  175 (188)
Q Consensus       171 ~~i~~  175 (188)
                      +|+++
T Consensus       300 ~elL~  304 (318)
T d3blha1         300 DDALN  304 (318)
T ss_dssp             HHHHH
T ss_pred             HHHHc
Confidence            99987

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=6.3e-35  Score=225.86  Aligned_cols=164  Identities=16%  Similarity=0.191  Sum_probs=132.5

Q ss_pred             ccccc-CCCeeeeccc-----CCccEEEEecCCCCChhhhcCCcc---------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLT-GPLLVELIGK-----QKNNALELGFRGNPELVDQQGKEE---------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~-Hpniv~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~---------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      |.+++ ||||++++++     ....++||||+++++|..+.+...         |++.||.|||+   .+|+||||||+|
T Consensus        83 l~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~l~e~~i~~i~~qil~aL~~LH~---~gIvHrDiKp~N  159 (328)
T d3bqca1          83 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHN  159 (328)
T ss_dssp             HHHHTTSTTBCCEEEEEECTTTCSEEEEEECCCSCBGGGTTTSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGG
T ss_pred             HHhccCCCCCcEEEEEEEecCCCceeEEEeecCCCcHHHHhcCCCHHHHHHHHHHHHHHHHHHhh---cccccccccccc
Confidence            45664 9999999987     456899999999999988875544         99999999999   999999999999


Q ss_pred             EEEccCC-ceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCCC
Q 039565           71 ILLNEKV-QAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFKG  142 (188)
Q Consensus        71 ill~~~~-~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~~  142 (188)
                      ||++.++ .+|++|||++......   .......+|..|+|||       ++.++|+||+||++|++++|..||......
T Consensus       160 ILi~~~~~~vkl~DFG~a~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~  236 (328)
T d3bqca1         160 VMIDHEHRKLRLIDWGLAEFYHPG---QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN  236 (328)
T ss_dssp             EEEETTTTEEEECCGGGCEECCTT---CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH
T ss_pred             eEEcCCCCeeeecccccceeccCC---CcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchh
Confidence            9998655 6899999999754311   2234456888899998       578899999999999999999887432110


Q ss_pred             -------------------------------------------------CcCHHHHHHHHHHHHHccCcCCCCCCCHHHH
Q 039565          143 -------------------------------------------------EFDIISVEKAVEIAMASVSSKVNRRPLMNQV  173 (188)
Q Consensus       143 -------------------------------------------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i  173 (188)
                                                                       ......+..+.+++.+||+.||++|||++|+
T Consensus       237 ~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~  316 (328)
T d3bqca1         237 YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA  316 (328)
T ss_dssp             HHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             HHHHHHHHHHHCCchhhhhhhhcccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHH
Confidence                                                             0111234568899999999999999999999


Q ss_pred             HH
Q 039565          174 VM  175 (188)
Q Consensus       174 ~~  175 (188)
                      ++
T Consensus       317 L~  318 (328)
T d3bqca1         317 ME  318 (328)
T ss_dssp             HT
T ss_pred             hc
Confidence            86

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=7.8e-35  Score=222.67  Aligned_cols=171  Identities=17%  Similarity=0.182  Sum_probs=131.0

Q ss_pred             cccccCCCeeeeccc----CCccEEEEecCCCCChhhhc--CCcc-----------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTGPLLVELIGK----QKNNALELGFRGNPELVDQQ--GKEE-----------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~Hpniv~~~~~----~~~~~lv~e~~~~~~L~~~~--~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +++++|+|++..++.    ....++||||+. +++...+  ....           |++.||+|||+   .+|+||||||
T Consensus        56 ~~~l~~~~~i~~~~~~~~~~~~~~ivme~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiHrDiKp  131 (299)
T d1ckia_          56 YKMMQGGVGIPTIRWCGAEGDYNVMVMELLG-PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKP  131 (299)
T ss_dssp             HHHSTTSTTCCCEEEEEEETTEEEEEEECCC-CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCG
T ss_pred             HHHccCCCcccEEEEEEecCCEEEEEEEEcC-CchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHH---CCeeeccCCH
Confidence            456777776555444    778889999996 4666655  2222           99999999999   9999999999


Q ss_pred             CcEEEcc---CCceEEecccCcccccCCCCC-----cceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCc
Q 039565           69 TNILLNE---KVQAKLADFGQSRISPVEGGT-----HMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGIL  134 (188)
Q Consensus        69 ~nill~~---~~~~kl~d~~~~~~~~~~~~~-----~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~  134 (188)
                      +||+++.   +..++++|||+++........     .......||+.|+|||      ++.++|||||||++|+|++|..
T Consensus       132 ~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~  211 (299)
T d1ckia_         132 DNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSL  211 (299)
T ss_dssp             GGEEECCGGGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred             hhccccccCCCceeeeeccCcceeccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCC
Confidence            9999864   457999999999865422211     1233467999999998      7899999999999999999999


Q ss_pred             cccccCCCCc-------------------CHHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhc
Q 039565          135 TVDLSFKGEF-------------------DIISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQG  180 (188)
Q Consensus       135 p~~~~~~~~~-------------------~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~  180 (188)
                      ||........                   ....+..+.+++..||+.+|++||+++++.+.|+..
T Consensus       212 P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~  276 (299)
T d1ckia_         212 PWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL  276 (299)
T ss_dssp             TTCCCC-------HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHH
T ss_pred             cccccchHHHHHHHHHhhcccCCCChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence            9965433221                   012345688999999999999999999998888765

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.4e-35  Score=221.80  Aligned_cols=165  Identities=16%  Similarity=0.117  Sum_probs=131.3

Q ss_pred             cccccCCCeeeeccc---CCccEEEEecCCCCChhhhcCCcc------------cHHHHHHHHhcCCCCCcEEeCCCCCc
Q 039565            6 RNKLTGPLLVELIGK---QKNNALELGFRGNPELVDQQGKEE------------VCCPGLEYLHQGLKHPIIQRDMKSTN   70 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---~~~~~lv~e~~~~~~L~~~~~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~~n   70 (188)
                      |++++||||++++++   ..+.+++++++.+++|..++....            |++.||+|||+   .+|+||||||+|
T Consensus        55 l~~l~h~niv~~~~~~~~~~~~~iv~~~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~---~~IvHrDiKP~N  131 (292)
T d1unla_          55 LKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQN  131 (292)
T ss_dssp             HTTCCCTTBCCEEEEEECSSEEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGG
T ss_pred             HHhcCcCCEEeeccccccccceeEEeeeccccccccccccccccchhHHHHHHHHHHHHHHHhhc---CCEeeecccCcc
Confidence            578899999999999   888899999999988888872222            99999999999   999999999999


Q ss_pred             EEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCccccccCC--
Q 039565           71 ILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLSFK--  141 (188)
Q Consensus        71 ill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~~~--  141 (188)
                      |+++.++.+|++|||.++.......  ......++..|.+||       ++.++||||+||++|+|++|..||-....  
T Consensus       132 Ili~~~~~~kl~DFG~a~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~  209 (292)
T d1unla_         132 LLINRNGELKLANFGLARAFGIPVR--CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD  209 (292)
T ss_dssp             EEECTTCCEEECCCTTCEECCSCCS--CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHH
T ss_pred             cccccCCceeeeecchhhcccCCCc--cceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHH
Confidence            9999999999999999986532211  222334556667765       57889999999999999999987521100  


Q ss_pred             ---------------------------------------CCcCHHHHHHHHHHHHHccCcCCCCCCCHHHHHH
Q 039565          142 ---------------------------------------GEFDIISVEKAVEIAMASVSSKVNRRPLMNQVVM  175 (188)
Q Consensus       142 ---------------------------------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~  175 (188)
                                                             .......+..+.+++.+||+.||++|||++|+++
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~  282 (292)
T d1unla_         210 DQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             HHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHhhcCCCChhhhhhhhhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                                                   0011233457889999999999999999999987

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=2.8e-34  Score=219.11  Aligned_cols=172  Identities=15%  Similarity=0.162  Sum_probs=136.5

Q ss_pred             cccccC-CCeeeeccc---CCccEEEEecCCCCChhhhc-CCc-c-----------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            6 RNKLTG-PLLVELIGK---QKNNALELGFRGNPELVDQQ-GKE-E-----------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         6 l~~l~H-pniv~~~~~---~~~~~lv~e~~~~~~L~~~~-~~~-~-----------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +..++| +|+++++++   ....++||||+. ++|.+++ ... .           |++.||+|||+   .+|+||||||
T Consensus        54 ~~~l~~~~~i~~~~~~~~~~~~~~~vme~~~-~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~---~giiHrDiKp  129 (293)
T d1csna_          54 YKLLAGCTGIPNVYYFGQEGLHNVLVIDLLG-PSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKP  129 (293)
T ss_dssp             HHHTTTCTTCCCEEEEEEETTEEEEEEECCC-CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCG
T ss_pred             HHHhcCCCCCCEEEEEeecCCccEEEEEecC-CCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHH---CCceeccCCc
Confidence            445655 888888888   888899999995 7999888 222 1           99999999999   9999999999


Q ss_pred             CcEEEcc-----CCceEEecccCcccccCCCCC-----cceeeecccccccCCC------CCCccchHHHHHHHHHHHhC
Q 039565           69 TNILLNE-----KVQAKLADFGQSRISPVEGGT-----HMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITG  132 (188)
Q Consensus        69 ~nill~~-----~~~~kl~d~~~~~~~~~~~~~-----~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g  132 (188)
                      +||+++.     .+.++++|||+++........     .......||+.|+|||      ++.++|+||||+++|+|++|
T Consensus       130 ~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg  209 (293)
T d1csna_         130 DNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRG  209 (293)
T ss_dssp             GGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHS
T ss_pred             cceeecCcccccCCceEEcccceeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhC
Confidence            9999974     568999999999865422111     1233467999999999      68899999999999999999


Q ss_pred             CccccccCCCCc--------------C-----HHHHHHHHHHHHHccCcCCCCCCCHHHHHHHHhhcc
Q 039565          133 ILTVDLSFKGEF--------------D-----IISVEKAVEIAMASVSSKVNRRPLMNQVVMVREQGS  181 (188)
Q Consensus       133 ~~p~~~~~~~~~--------------~-----~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~~l~~~~  181 (188)
                      ..||........              +     ...++.+.+++..|+..+|++||+++.+.+.|+++.
T Consensus       210 ~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~  277 (293)
T d1csna_         210 SLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVL  277 (293)
T ss_dssp             SCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred             CCcCCCccchhHHHHHHHHHhccCCCChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence            999975433221              0     113357889999999999999999999988887654

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.5e-34  Score=222.82  Aligned_cols=164  Identities=18%  Similarity=0.192  Sum_probs=126.0

Q ss_pred             cccccCCCeeeeccc---------CCccEEEEecCCCCChhhhcCCcc---------cHHHHHHHHhcCCCCCcEEeCCC
Q 039565            6 RNKLTGPLLVELIGK---------QKNNALELGFRGNPELVDQQGKEE---------VCCPGLEYLHQGLKHPIIQRDMK   67 (188)
Q Consensus         6 l~~l~Hpniv~~~~~---------~~~~~lv~e~~~~~~L~~~~~~~~---------~i~~~l~~Lh~~~~~~i~h~dl~   67 (188)
                      +++++||||++++++         ..+.+++|||+.++.+..+.....         |++.||.|||+   .+|+|||+|
T Consensus        70 l~~l~hpnIv~~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~~~~~~~~~~~i~~~~~qil~gl~~LH~---~giiHrDlK  146 (355)
T d2b1pa1          70 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLK  146 (355)
T ss_dssp             HHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCC
T ss_pred             HHhcCCCCeeEEEEEEecccccccCceeEEEEeccchHHHHhhhcCCCHHHHHHHHHHHHHHHHHhhh---cccccccCC
Confidence            467899999999998         257799999998765555444444         99999999999   999999999


Q ss_pred             CCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccccccCC
Q 039565           68 STNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTVDLSFK  141 (188)
Q Consensus        68 ~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~~~~~~  141 (188)
                      |+||+++.++..+++|||+++...   .........+|..|+|||      ++.++||||+||++|+|++|..||.....
T Consensus       147 P~Nil~~~~~~~kl~df~~~~~~~---~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~  223 (355)
T d2b1pa1         147 PSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY  223 (355)
T ss_dssp             GGGEEECTTCCEEECCCCC------------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             ccccccccccceeeechhhhhccc---cccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCH
Confidence            999999999999999999887543   222334557888999999      68899999999999999999998842110


Q ss_pred             -----------------------------------------------------CCcCHHHHHHHHHHHHHccCcCCCCCC
Q 039565          142 -----------------------------------------------------GEFDIISVEKAVEIAMASVSSKVNRRP  168 (188)
Q Consensus       142 -----------------------------------------------------~~~~~~~~~~~~~l~~~cl~~~p~~Rp  168 (188)
                                                                           .......+..+.+++.+||..||++||
T Consensus       224 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~  303 (355)
T d2b1pa1         224 IDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI  303 (355)
T ss_dssp             HHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSC
T ss_pred             HHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCc
Confidence                                                                 001123466789999999999999999


Q ss_pred             CHHHHHH
Q 039565          169 LMNQVVM  175 (188)
Q Consensus       169 s~~~i~~  175 (188)
                      |++|+++
T Consensus       304 ta~elL~  310 (355)
T d2b1pa1         304 SVDDALQ  310 (355)
T ss_dssp             CHHHHHT
T ss_pred             CHHHHhc
Confidence            9999986

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-34  Score=224.04  Aligned_cols=167  Identities=20%  Similarity=0.236  Sum_probs=130.5

Q ss_pred             cccccCCCeeeeccc--------CCccEEEEecCCCCChhhhcCCcc-----------cHHHHHHHHhcCCCCCcEEeCC
Q 039565            6 RNKLTGPLLVELIGK--------QKNNALELGFRGNPELVDQQGKEE-----------VCCPGLEYLHQGLKHPIIQRDM   66 (188)
Q Consensus         6 l~~l~Hpniv~~~~~--------~~~~~lv~e~~~~~~L~~~~~~~~-----------~i~~~l~~Lh~~~~~~i~h~dl   66 (188)
                      |.+++|||||+++++        ....+++++|+.+|+|.+++....           |++.||+|||+   .+|+||||
T Consensus        71 l~~l~h~~iv~~~~~~~~~~~~~~~~~~~i~~~~~gg~L~~~~~~~~l~e~~~~~i~~qil~aL~~LH~---~giiHrDi  147 (348)
T d2gfsa1          71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDL  147 (348)
T ss_dssp             HHHCCCTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCC
T ss_pred             HHhcCCCCeeeEEEEEeeccccccCceEEEEEeecCCchhhhcccccccHHHHHHHHHHHHHHHHHHHh---CCCccccc
Confidence            568899999999987        234577788888999999993333           99999999999   99999999


Q ss_pred             CCCcEEEccCCceEEecccCcccccCCCCCcceeeecccccccCCC-------CCCccchHHHHHHHHHHHhCCcccccc
Q 039565           67 KSTNILLNEKVQAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE-------LTEKSDVDSFEIVILEIITGILTVDLS  139 (188)
Q Consensus        67 ~~~nill~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe-------~~~~~di~s~G~~l~~~~~g~~p~~~~  139 (188)
                      ||+||+++.++.+|++|||.+....     .......|+..|++||       .+.++|+||+||++|+|++|..||...
T Consensus       148 Kp~NILi~~~~~~kl~dfg~a~~~~-----~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~  222 (348)
T d2gfsa1         148 KPSNLAVNEDCELKILDFGLARHTD-----DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT  222 (348)
T ss_dssp             CGGGEEECTTCCEEECCC----CCT-----GGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             CCccccccccccccccccchhcccC-----cccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCC
Confidence            9999999999999999999886432     2234456788889888       478999999999999999999998532


Q ss_pred             CCC-------------------------------------CcC-----HHHHHHHHHHHHHccCcCCCCCCCHHHHHH--
Q 039565          140 FKG-------------------------------------EFD-----IISVEKAVEIAMASVSSKVNRRPLMNQVVM--  175 (188)
Q Consensus       140 ~~~-------------------------------------~~~-----~~~~~~~~~l~~~cl~~~p~~Rps~~~i~~--  175 (188)
                      ...                                     ..+     ...+..+.+++.+||+.||++|||++|+++  
T Consensus       223 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp  302 (348)
T d2gfsa1         223 DHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA  302 (348)
T ss_dssp             SHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred             CHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCH
Confidence            100                                     000     112456789999999999999999999997  


Q ss_pred             HHhhc
Q 039565          176 VREQG  180 (188)
Q Consensus       176 ~l~~~  180 (188)
                      .|.+.
T Consensus       303 ~f~~~  307 (348)
T d2gfsa1         303 YFAQY  307 (348)
T ss_dssp             GGTTT
T ss_pred             hhCCC
Confidence            45443

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=2e-28  Score=191.10  Aligned_cols=161  Identities=19%  Similarity=0.200  Sum_probs=121.7

Q ss_pred             ccCCCeeeeccc-----CCccEEEEecCCCCChhhh-c--CCcc------------cHHHHHHHHhcCCCCCcEEeCCCC
Q 039565            9 LTGPLLVELIGK-----QKNNALELGFRGNPELVDQ-Q--GKEE------------VCCPGLEYLHQGLKHPIIQRDMKS   68 (188)
Q Consensus         9 l~Hpniv~~~~~-----~~~~~lv~e~~~~~~L~~~-~--~~~~------------~i~~~l~~Lh~~~~~~i~h~dl~~   68 (188)
                      +.|+||++++++     ....+++++++..+..... .  ....            |++.||.|||+  ..+|+||||||
T Consensus        77 ~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~--~~~IvHrDlKp  154 (362)
T d1q8ya_          77 MGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHR--RCGIIHTDIKP  154 (362)
T ss_dssp             HHHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH--TTCEECSCCSG
T ss_pred             cCcCceEEEEEEeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhh--hcCcccccCCh
Confidence            458899999887     4556677777654432222 2  2111            99999999996  27899999999


Q ss_pred             CcEEEccCC------ceEEecccCcccccCCCCCcceeeecccccccCCC------CCCccchHHHHHHHHHHHhCCccc
Q 039565           69 TNILLNEKV------QAKLADFGQSRISPVEGGTHMSTTIAGTAGFLNTE------LTEKSDVDSFEIVILEIITGILTV  136 (188)
Q Consensus        69 ~nill~~~~------~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~pe------~~~~~di~s~G~~l~~~~~g~~p~  136 (188)
                      +||+++.++      .++++|||.+.....     ......|++.|+|||      ++.++|+||+||++++|++|..||
T Consensus       155 ~NIll~~~~~~~~~~~~kl~dfg~s~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF  229 (362)
T d1q8ya_         155 ENVLMEIVDSPENLIQIKIADLGNACWYDE-----HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLF  229 (362)
T ss_dssp             GGEEEEEEETTTTEEEEEECCCTTCEETTB-----CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC
T ss_pred             hHeeeeccCcccccceeeEeeccccccccc-----ccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCC
Confidence            999998654      489999999875321     223457889999999      689999999999999999999988


Q ss_pred             cccCC-----------------------------------------------------------CCcCHHHHHHHHHHHH
Q 039565          137 DLSFK-----------------------------------------------------------GEFDIISVEKAVEIAM  157 (188)
Q Consensus       137 ~~~~~-----------------------------------------------------------~~~~~~~~~~~~~l~~  157 (188)
                      .+...                                                           .......+..+.+++.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~  309 (362)
T d1q8ya_         230 EPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLS  309 (362)
T ss_dssp             ---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHG
T ss_pred             CCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHH
Confidence            53211                                                           0122455678999999


Q ss_pred             HccCcCCCCCCCHHHHHHH
Q 039565          158 ASVSSKVNRRPLMNQVVMV  176 (188)
Q Consensus       158 ~cl~~~p~~Rps~~~i~~~  176 (188)
                      .|+..||.+|||++|+++.
T Consensus       310 ~mL~~dP~~Rpta~e~L~H  328 (362)
T d1q8ya_         310 PMLQLDPRKRADAGGLVNH  328 (362)
T ss_dssp             GGGCSSTTTCBCHHHHHTC
T ss_pred             HHCCCChhHCcCHHHHhcC
Confidence            9999999999999999873

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.55  E-value=3.4e-16  Score=111.08  Aligned_cols=115  Identities=17%  Similarity=0.207  Sum_probs=77.8

Q ss_pred             CcccccCCCeeeecccCCccEEEEecCCCCChhhhcCCcc-----cHHHHHHHHhcCCCCCcEEeCCCCCcEEEccCCce
Q 039565            5 NRNKLTGPLLVELIGKQKNNALELGFRGNPELVDQQGKEE-----VCCPGLEYLHQGLKHPIIQRDMKSTNILLNEKVQA   79 (188)
Q Consensus         5 ~l~~l~Hpniv~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-----~i~~~l~~Lh~~~~~~i~h~dl~~~nill~~~~~~   79 (188)
                      .+.++.|++++..++.. ..+++|||+++..+...-....     |++.|+.|||+   .+++|||+||+||+++++ .+
T Consensus        67 ~l~~l~~~~v~~~~~~~-~~~lvme~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~---~giiHrDiKP~NILv~~~-~~  141 (191)
T d1zara2          67 ALQKLQGLAVPKVYAWE-GNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYH---RGIVHGDLSQYNVLVSEE-GI  141 (191)
T ss_dssp             HHHHTTTSSSCCEEEEE-TTEEEEECCCCEEGGGCCCSCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEETT-EE
T ss_pred             HHHHccCCCcceEEEec-CCEEEEEeeccccccchhhHHHHHHHHHHHHHHHHHhh---CCEEEccCChhheeeeCC-CE
Confidence            35667888888887762 2379999999876655442221     99999999999   999999999999999965 48


Q ss_pred             EEecccCcccccCCCCCcceee-ecccccccCCCCCCccchHHHHH
Q 039565           80 KLADFGQSRISPVEGGTHMSTT-IAGTAGFLNTELTEKSDVDSFEI  124 (188)
Q Consensus        80 kl~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~pe~~~~~di~s~G~  124 (188)
                      +++|||.++....+........ ......|....++.++|+||..-
T Consensus       142 ~liDFG~a~~~~~~~~~~~l~rd~~~~~~~f~r~y~~~~d~~s~~~  187 (191)
T d1zara2         142 WIIDFPQSVEVGEEGWREILERDVRNIITYFSRTYRTEKDINSAID  187 (191)
T ss_dssp             EECCCTTCEETTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
T ss_pred             EEEECCCcccCCCCCcHHHHHHHHHHHHHHHcCCCCCcccHHHHHH
Confidence            8999999875432211110000 00001122233678889999653

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.22  E-value=0.0033  Score=44.53  Aligned_cols=29  Identities=21%  Similarity=0.392  Sum_probs=24.7

Q ss_pred             CcEEeCCCCCcEEEccCCceEEecccCcc
Q 039565           60 PIIQRDMKSTNILLNEKVQAKLADFGQSR   88 (188)
Q Consensus        60 ~i~h~dl~~~nill~~~~~~kl~d~~~~~   88 (188)
                      .++|+|+.+.||+++.++...+.||+.+.
T Consensus       184 ~l~HgD~~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T d1j7la_         184 VFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             EEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             EEEEeeccCcceeecCCceEEEeechhcc
Confidence            37899999999999987667799998765

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=93.65  E-value=0.0089  Score=43.57  Aligned_cols=31  Identities=19%  Similarity=0.221  Sum_probs=27.3

Q ss_pred             CCCcEEeCCCCCcEEEccCCceEEecccCcc
Q 039565           58 KHPIIQRDMKSTNILLNEKVQAKLADFGQSR   88 (188)
Q Consensus        58 ~~~i~h~dl~~~nill~~~~~~kl~d~~~~~   88 (188)
                      ..+++|+|+.+.|++++.+....+.||+.+.
T Consensus       182 ~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         182 PAGVIHADLFQDNVFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             CEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             ccccccCCcchhhhhcccccceeEecccccc
Confidence            3579999999999999988777899998765

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=90.67  E-value=0.045  Score=38.09  Aligned_cols=29  Identities=17%  Similarity=0.217  Sum_probs=24.7

Q ss_pred             CcEEeCCCCCcEEEccCCceEEecccCcc
Q 039565           60 PIIQRDMKSTNILLNEKVQAKLADFGQSR   88 (188)
Q Consensus        60 ~i~h~dl~~~nill~~~~~~kl~d~~~~~   88 (188)
                      .++|+|+.|.||+++.+....+.||+.+.
T Consensus       176 ~liHgD~~~~Nvl~~~~~~~~iID~~~~~  204 (255)
T d1nd4a_         176 VVTHGDACLPNIMVENGRFSGFIDCGRLG  204 (255)
T ss_dssp             EEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             eEEeCCCCCcceEEeCCceEEEEEchhcc
Confidence            37999999999999987667899998664

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=88.19  E-value=0.11  Score=39.09  Aligned_cols=30  Identities=20%  Similarity=0.273  Sum_probs=25.3

Q ss_pred             CCcEEeCCCCCcEEEccCCceEEecccCccc
Q 039565           59 HPIIQRDMKSTNILLNEKVQAKLADFGQSRI   89 (188)
Q Consensus        59 ~~i~h~dl~~~nill~~~~~~kl~d~~~~~~   89 (188)
                      ..++|+|+.+.|||++.+. +++.||..+..
T Consensus       223 ~~LiHGDl~~gNIlv~~~~-~~vID~E~a~~  252 (392)
T d2pula1         223 ETLIHGDLHTGSIFASEHE-TKVIDPEFAFY  252 (392)
T ss_dssp             CEEECSCCCGGGEEECSSC-EEECCCTTCEE
T ss_pred             cceeccCCcCCceeEcCCc-eEEechhhccc
Confidence            4689999999999998764 89999987653

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=81.70  E-value=0.27  Score=35.61  Aligned_cols=30  Identities=20%  Similarity=0.285  Sum_probs=23.7

Q ss_pred             CCCcEEeCCCCCcEEEccCCceEEecccCccc
Q 039565           58 KHPIIQRDMKSTNILLNEKVQAKLADFGQSRI   89 (188)
Q Consensus        58 ~~~i~h~dl~~~nill~~~~~~kl~d~~~~~~   89 (188)
                      ..+++|+|+.+.|++++++  ..+.||+-+..
T Consensus       191 p~~liHgDlh~~NvL~~~~--~~~IDFdd~~~  220 (325)
T d1zyla1         191 TVLRLHGDCHAGNILWRDG--PMFVDLDDARN  220 (325)
T ss_dssp             CCEECCSSCSGGGEEESSS--EEECCCTTCCE
T ss_pred             CceeecCCCCcccEEEeCC--ceEEechhccc
Confidence            3578999999999999753  45789987653