Your job contains 1 sequence.
>039578
MVKFLKPNKVVILLQGRYAGRKVVISRVEAFVKLVNYQHLMPTRYTLNIDLKEVLTADSL
QSKDKKVTACKETKKRLEERFKTGKNCWFFTKLGF
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 039578
(95 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2090434 - symbol:AT3G22230 species:3702 "Arabi... 295 4.0e-26 1
TAIR|locus:2129575 - symbol:AT4G15000 species:3702 "Arabi... 294 5.2e-26 1
TAIR|locus:2045467 - symbol:AT2G32220 species:3702 "Arabi... 274 6.8e-24 1
ZFIN|ZDB-GENE-030131-4343 - symbol:rpl27 "ribosomal prote... 185 1.4e-22 2
UNIPROTKB|P61355 - symbol:RPL27 "60S ribosomal protein L2... 182 4.7e-22 2
UNIPROTKB|P61356 - symbol:RPL27 "60S ribosomal protein L2... 182 4.7e-22 2
UNIPROTKB|F2Z4N3 - symbol:RPL27 "60S ribosomal protein L2... 182 4.7e-22 2
UNIPROTKB|P61353 - symbol:RPL27 "60S ribosomal protein L2... 182 4.7e-22 2
UNIPROTKB|A1XQU5 - symbol:RPL27 "60S ribosomal protein L2... 182 4.7e-22 2
UNIPROTKB|I3LIX1 - symbol:RPL27 "60S ribosomal protein L2... 182 4.7e-22 2
RGD|621192 - symbol:Rpl27 "ribosomal protein L27" species... 182 4.7e-22 2
RGD|1585224 - symbol:Rpl27-l1 "ribosomal protein L27-like... 181 6.0e-22 2
UNIPROTKB|Q9XSU7 - symbol:RPL27 "60S ribosomal protein L2... 179 9.7e-22 2
UNIPROTKB|E2QVG7 - symbol:RPL27 "Uncharacterized protein"... 166 8.4e-21 2
RGD|1565900 - symbol:RGD1565900 "similar to ribosomal pro... 161 3.1e-19 2
FB|FBgn0039359 - symbol:RpL27 "Ribosomal protein L27" spe... 146 2.9e-17 2
ASPGD|ASPL0000016741 - symbol:AN4222 species:162425 "Emer... 198 7.7e-16 1
POMBASE|SPBC685.07c - symbol:rpl2701 "60S ribosomal prote... 194 2.0e-15 1
RGD|1563835 - symbol:RGD1563835 "similar to ribosomal pro... 185 1.8e-14 1
UNIPROTKB|G4ML54 - symbol:MGG_06693 "60S ribosomal protei... 183 3.0e-14 1
UNIPROTKB|K7ELC7 - symbol:RPL27 "60S ribosomal protein L2... 182 3.8e-14 1
UNIPROTKB|K7EQQ9 - symbol:RPL27 "60S ribosomal protein L2... 182 3.8e-14 1
SGD|S000001052 - symbol:RPL27A "Ribosomal 60S subunit pro... 179 7.9e-14 1
SGD|S000002879 - symbol:RPL27B "Ribosomal 60S subunit pro... 179 7.9e-14 1
POMBASE|SPCC74.05 - symbol:rpl2702 "60S ribosomal protein... 178 1.0e-13 1
WB|WBGene00004441 - symbol:rpl-27 species:6239 "Caenorhab... 175 2.1e-13 1
UNIPROTKB|E2R202 - symbol:E2R202 "Uncharacterized protein... 87 1.2e-11 2
UNIPROTKB|F1MSX2 - symbol:F1MSX2 "Uncharacterized protein... 116 2.6e-10 2
DICTYBASE|DDB_G0271298 - symbol:rpl27 "S60 ribosomal prot... 138 1.8e-09 1
RGD|1587075 - symbol:LOC680808 "hypothetical protein LOC6... 87 5.7e-09 2
RGD|1561870 - symbol:RGD1561870 "similar to ribosomal pro... 121 1.1e-07 1
GENEDB_PFALCIPARUM|PF14_0579 - symbol:PF14_0579 "ribosoma... 110 1.6e-06 1
UNIPROTKB|Q8IKM5 - symbol:PF14_0579 "60S ribosomal protei... 110 1.6e-06 1
RGD|1560069 - symbol:RGD1560069 "similar to ribosomal pro... 98 3.0e-05 1
UNIPROTKB|D3ZZV8 - symbol:D3ZZV8 "Uncharacterized protein... 97 3.9e-05 1
UNIPROTKB|K7ERY7 - symbol:RPL27 "60S ribosomal protein L2... 93 0.00010 1
UNIPROTKB|D4A7I3 - symbol:D4A7I3 "Uncharacterized protein... 84 0.00093 1
>TAIR|locus:2090434 [details] [associations]
symbol:AT3G22230 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=RCA] InterPro:IPR001141 InterPro:IPR018262 Pfam:PF01777
ProDom:PD009396 PROSITE:PS01107 EnsemblPlants:AT3G22230.1
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006412 GO:GO:0003735
Gene3D:2.30.30.30 InterPro:IPR014722 EMBL:AP001306 GO:GO:0022625
eggNOG:COG2163 HOGENOM:HOG000210138 KO:K02901
ProtClustDB:CLSN2683281 PANTHER:PTHR10497 EMBL:AY062617
EMBL:AY063860 EMBL:AY091218 EMBL:AY093389 EMBL:AY136321
EMBL:BT000418 EMBL:AY086536 IPI:IPI00521771 RefSeq:NP_188862.1
UniGene:At.5917 UniGene:At.71423 UniGene:At.72236
ProteinModelPortal:Q8LCL3 SMR:Q8LCL3 STRING:Q8LCL3 PaxDb:Q8LCL3
PRIDE:Q8LCL3 GeneID:821787 KEGG:ath:AT3G22230 GeneFarm:260
TAIR:At3g22230 InParanoid:Q8LCL3 OMA:FNYNHLM PhylomeDB:Q8LCL3
Genevestigator:Q8LCL3 GermOnline:AT3G22230 Uniprot:Q8LCL3
Length = 135
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 59/89 (66%), Positives = 70/89 (78%)
Query: 7 PNKVVILLQGRYAGRKVVISRVEAFVKLVNYQHLMPTRYTLNIDLKEVLTADSLQSKDKK 66
P+KV+ + +K SRV+ F+KLVNYQHLMPTRYTL++DLKEV T D+L+SKDKK
Sbjct: 50 PSKVIRKDSAKKTAKK---SRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALKSKDKK 106
Query: 67 VTACKETKKRLEERFKTGKNCWFFTKLGF 95
VTA KE K +LEERFKTGKN WFFTKL F
Sbjct: 107 VTALKEAKAKLEERFKTGKNRWFFTKLRF 135
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 21/25 (84%), Positives = 22/25 (88%)
Query: 1 MVKFLKPNKVVILLQGRYAGRKVVI 25
MVKFLK NK VILLQGRYAG+K VI
Sbjct: 1 MVKFLKQNKAVILLQGRYAGKKAVI 25
>TAIR|locus:2129575 [details] [associations]
symbol:AT4G15000 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS]
[GO:0006412 "translation" evidence=IEA;ISS] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
[GO:0001510 "RNA methylation" evidence=RCA] InterPro:IPR001141
InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396 PROSITE:PS01107
EnsemblPlants:AT4G15000.1 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006412 GO:GO:0003735 EMBL:AL161540 EMBL:Z97337
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0022625 eggNOG:COG2163
HOGENOM:HOG000210138 KO:K02901 ProtClustDB:CLSN2683281
PANTHER:PTHR10497 EMBL:AY063987 EMBL:AY096731 EMBL:AY085487
EMBL:Z35388 IPI:IPI00528946 PIR:E71413 RefSeq:NP_193236.1
UniGene:At.24910 ProteinModelPortal:P51419 SMR:P51419 STRING:P51419
PaxDb:P51419 PRIDE:P51419 GeneID:827159 KEGG:ath:AT4G15000
GeneFarm:261 TAIR:At4g15000 InParanoid:P51419 OMA:HRCARTA
PhylomeDB:P51419 Genevestigator:P51419 GermOnline:AT4G15000
Uniprot:P51419
Length = 135
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 59/89 (66%), Positives = 69/89 (77%)
Query: 7 PNKVVILLQGRYAGRKVVISRVEAFVKLVNYQHLMPTRYTLNIDLKEVLTADSLQSKDKK 66
P+KV+ + +K SRV+ F+KLVNYQHLMPTRYTL++DLKEV T D+LQSKDKK
Sbjct: 50 PSKVIRKDSAKKTAKK---SRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALQSKDKK 106
Query: 67 VTACKETKKRLEERFKTGKNCWFFTKLGF 95
V A KE K +LEERFKTGKN WFFTKL F
Sbjct: 107 VAALKEAKAKLEERFKTGKNRWFFTKLRF 135
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 21/25 (84%), Positives = 22/25 (88%)
Query: 1 MVKFLKPNKVVILLQGRYAGRKVVI 25
MVKFLK NK VILLQGRYAG+K VI
Sbjct: 1 MVKFLKQNKAVILLQGRYAGKKAVI 25
>TAIR|locus:2045467 [details] [associations]
symbol:AT2G32220 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS]
[GO:0006412 "translation" evidence=IEA;ISS] [GO:0016020 "membrane"
evidence=IDA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IDA] [GO:0001510 "RNA methylation" evidence=RCA]
InterPro:IPR001141 InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396
PROSITE:PS01107 EnsemblPlants:AT2G32220.1 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0006412 GO:GO:0003735
EMBL:AC006223 Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0022625
eggNOG:COG2163 EMBL:BT021972 IPI:IPI00536680 PIR:D84730
RefSeq:NP_180781.1 UniGene:At.38108 ProteinModelPortal:Q9SKX8
SMR:Q9SKX8 STRING:Q9SKX8 PRIDE:Q9SKX8 GeneID:817781
KEGG:ath:AT2G32220 GeneFarm:259 TAIR:At2g32220 HOGENOM:HOG000210138
InParanoid:Q9SKX8 KO:K02901 OMA:RVKCFFK PhylomeDB:Q9SKX8
ProtClustDB:CLSN2683281 Genevestigator:Q9SKX8 GermOnline:AT2G32220
PANTHER:PTHR10497 Uniprot:Q9SKX8
Length = 135
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 53/89 (59%), Positives = 68/89 (76%)
Query: 7 PNKVVILLQGRYAGRKVVISRVEAFVKLVNYQHLMPTRYTLNIDLKEVLTADSLQSKDKK 66
P+KV+ + +K SRV+ F K++NYQH+MPTRYTL++DLK V++AD++ SKDKK
Sbjct: 50 PSKVIRKDSAKKTAKK---SRVKCFFKVINYQHVMPTRYTLDLDLKNVVSADAISSKDKK 106
Query: 67 VTACKETKKRLEERFKTGKNCWFFTKLGF 95
VTA KE K + EERFKTGKN WFFTKL F
Sbjct: 107 VTALKEAKAKFEERFKTGKNRWFFTKLRF 135
Score = 92 (37.4 bits), Expect = 0.00013, P = 0.00013
Identities = 20/31 (64%), Positives = 24/31 (77%)
Query: 1 MVKFLKPNKVVILLQGRYAGRKVVISRVEAF 31
MVK +KP K VILLQGRY G+K VI V++F
Sbjct: 1 MVKCMKPGKAVILLQGRYTGKKAVI--VKSF 29
>ZFIN|ZDB-GENE-030131-4343 [details] [associations]
symbol:rpl27 "ribosomal protein L27" species:7955
"Danio rerio" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR001141 InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396
PROSITE:PS01107 Pfam:PF00467 ZFIN:ZDB-GENE-030131-4343
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR005824 SMART:SM00739 eggNOG:COG2163
HOGENOM:HOG000210138 KO:K02901 PANTHER:PTHR10497 OMA:FNYNHLM
GeneTree:ENSGT00390000010721 CTD:6155 HOVERGEN:HBG050005
OrthoDB:EOG48SGVG EMBL:BC045965 IPI:IPI00490551 RefSeq:NP_956018.1
UniGene:Dr.75716 ProteinModelPortal:Q7ZV82 STRING:Q7ZV82
PRIDE:Q7ZV82 Ensembl:ENSDART00000020311 Ensembl:ENSDART00000140518
GeneID:325618 KEGG:dre:325618 InParanoid:Q7ZV82 NextBio:20809388
Bgee:Q7ZV82 Uniprot:Q7ZV82
Length = 136
Score = 185 (70.2 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 39/79 (49%), Positives = 53/79 (67%)
Query: 20 GRKVVI--SRVEAFVKLVNYQHLMPTRYTLNIDL-KEVLTADSLQSKDKKVTACKETKKR 76
G+K + S+++AFVK+ NY HLMPTRY+++I L K V+ D + K A +E K +
Sbjct: 58 GKKKIAKRSKIKAFVKVFNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVK 117
Query: 77 LEERFKTGKNCWFFTKLGF 95
EER+KTGKN WFF KL F
Sbjct: 118 FEERYKTGKNKWFFQKLRF 136
Score = 91 (37.1 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 18/25 (72%), Positives = 21/25 (84%)
Query: 1 MVKFLKPNKVVILLQGRYAGRKVVI 25
M KF+KP KVV++L GRYAGRK VI
Sbjct: 1 MGKFMKPGKVVMVLAGRYAGRKAVI 25
>UNIPROTKB|P61355 [details] [associations]
symbol:RPL27 "60S ribosomal protein L27" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IEA]
InterPro:IPR001141 InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396
PROSITE:PS01107 Pfam:PF00467 GO:GO:0006412 GO:GO:0003735
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0022625
InterPro:IPR005824 SMART:SM00739 eggNOG:COG2163
HOGENOM:HOG000210138 KO:K02901 PANTHER:PTHR10497 OMA:FNYNHLM
GeneTree:ENSGT00390000010721 CTD:6155 HOVERGEN:HBG050005
OrthoDB:EOG48SGVG EMBL:X56852 IPI:IPI00577674 PIR:S22288
RefSeq:NP_990668.1 UniGene:Gga.743 ProteinModelPortal:P61355
SMR:P61355 STRING:P61355 PRIDE:P61355 Ensembl:ENSGALT00000004478
Ensembl:ENSGALT00000039748 GeneID:396280 KEGG:gga:396280
InParanoid:P61355 NextBio:20816331 Uniprot:P61355
Length = 136
Score = 182 (69.1 bits), Expect = 4.7e-22, Sum P(2) = 4.7e-22
Identities = 38/79 (48%), Positives = 53/79 (67%)
Query: 20 GRKVVI--SRVEAFVKLVNYQHLMPTRYTLNIDL-KEVLTADSLQSKDKKVTACKETKKR 76
G+K + S++++FVK+ NY HLMPTRY+++I L K V+ D + K A +E K +
Sbjct: 58 GKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVK 117
Query: 77 LEERFKTGKNCWFFTKLGF 95
EER+KTGKN WFF KL F
Sbjct: 118 FEERYKTGKNKWFFQKLRF 136
Score = 89 (36.4 bits), Expect = 4.7e-22, Sum P(2) = 4.7e-22
Identities = 17/25 (68%), Positives = 21/25 (84%)
Query: 1 MVKFLKPNKVVILLQGRYAGRKVVI 25
M KF+KP KVV++L GRY+GRK VI
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVI 25
>UNIPROTKB|P61356 [details] [associations]
symbol:RPL27 "60S ribosomal protein L27" species:9913 "Bos
taurus" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR001141 InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396
PROSITE:PS01107 Pfam:PF00467 GO:GO:0006412 GO:GO:0003735
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0022625
InterPro:IPR005824 SMART:SM00739 eggNOG:COG2163
HOGENOM:HOG000210138 KO:K02901 PANTHER:PTHR10497 OMA:FNYNHLM
GeneTree:ENSGT00390000010721 EMBL:AB098983 EMBL:BC102313
IPI:IPI00696544 RefSeq:NP_001029223.1 UniGene:Bt.4721
ProteinModelPortal:P61356 SMR:P61356 STRING:P61356 PRIDE:P61356
Ensembl:ENSBTAT00000023183 GeneID:404137 KEGG:bta:404137 CTD:6155
HOVERGEN:HBG050005 InParanoid:P61356 OrthoDB:EOG48SGVG
NextBio:20817574 Uniprot:P61356
Length = 136
Score = 182 (69.1 bits), Expect = 4.7e-22, Sum P(2) = 4.7e-22
Identities = 38/79 (48%), Positives = 53/79 (67%)
Query: 20 GRKVVI--SRVEAFVKLVNYQHLMPTRYTLNIDL-KEVLTADSLQSKDKKVTACKETKKR 76
G+K + S++++FVK+ NY HLMPTRY+++I L K V+ D + K A +E K +
Sbjct: 58 GKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVK 117
Query: 77 LEERFKTGKNCWFFTKLGF 95
EER+KTGKN WFF KL F
Sbjct: 118 FEERYKTGKNKWFFQKLRF 136
Score = 89 (36.4 bits), Expect = 4.7e-22, Sum P(2) = 4.7e-22
Identities = 17/25 (68%), Positives = 21/25 (84%)
Query: 1 MVKFLKPNKVVILLQGRYAGRKVVI 25
M KF+KP KVV++L GRY+GRK VI
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVI 25
>UNIPROTKB|F2Z4N3 [details] [associations]
symbol:RPL27 "60S ribosomal protein L27" species:9615
"Canis lupus familiaris" [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001141
InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396 PROSITE:PS01107
Pfam:PF00467 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR005824
SMART:SM00739 KO:K02901 PANTHER:PTHR10497 OMA:FNYNHLM
GeneTree:ENSGT00390000010721 CTD:6155 RefSeq:NP_001003102.2
UniGene:Cfa.28035 GeneID:403688 KEGG:cfa:403688 NextBio:20817192
EMBL:AAEX03006440 ProteinModelPortal:F2Z4N3 SMR:F2Z4N3 PRIDE:F2Z4N3
Ensembl:ENSCAFT00000023219 Uniprot:F2Z4N3
Length = 136
Score = 182 (69.1 bits), Expect = 4.7e-22, Sum P(2) = 4.7e-22
Identities = 38/79 (48%), Positives = 53/79 (67%)
Query: 20 GRKVVI--SRVEAFVKLVNYQHLMPTRYTLNIDL-KEVLTADSLQSKDKKVTACKETKKR 76
G+K + S++++FVK+ NY HLMPTRY+++I L K V+ D + K A +E K +
Sbjct: 58 GKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVK 117
Query: 77 LEERFKTGKNCWFFTKLGF 95
EER+KTGKN WFF KL F
Sbjct: 118 FEERYKTGKNKWFFQKLRF 136
Score = 89 (36.4 bits), Expect = 4.7e-22, Sum P(2) = 4.7e-22
Identities = 17/25 (68%), Positives = 21/25 (84%)
Query: 1 MVKFLKPNKVVILLQGRYAGRKVVI 25
M KF+KP KVV++L GRY+GRK VI
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVI 25
>UNIPROTKB|P61353 [details] [associations]
symbol:RPL27 "60S ribosomal protein L27" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=NAS;TAS] [GO:0005840 "ribosome" evidence=TAS] [GO:0006412
"translation" evidence=NAS;TAS] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IDA] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006413 "translational
initiation" evidence=TAS] [GO:0006414 "translational elongation"
evidence=TAS] [GO:0006415 "translational termination" evidence=TAS]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR001141 InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396
PROSITE:PS01107 Pfam:PF00467 Reactome:REACT_116125 GO:GO:0000184
GO:GO:0006413 GO:GO:0003735 Gene3D:2.30.30.30 InterPro:IPR014722
GO:GO:0006415 GO:GO:0006414 Reactome:REACT_1762 GO:GO:0006614
GO:GO:0022625 InterPro:IPR005824 SMART:SM00739 GO:GO:0019083
eggNOG:COG2163 HOGENOM:HOG000210138 KO:K02901 PANTHER:PTHR10497
OMA:FNYNHLM CTD:6155 HOVERGEN:HBG050005 OrthoDB:EOG48SGVG
EMBL:L19527 EMBL:AB061851 EMBL:L05094 EMBL:BC001700 EMBL:BC002588
EMBL:BC007273 EMBL:BC010026 EMBL:BC098560 IPI:IPI00219155
PIR:S43505 RefSeq:NP_000979.1 UniGene:Hs.514196 UniGene:Hs.660076
ProteinModelPortal:P61353 SMR:P61353 IntAct:P61353
MINT:MINT-1145695 STRING:P61353 PhosphoSite:P61353 DMDM:47117772
SWISS-2DPAGE:P61353 PaxDb:P61353 PRIDE:P61353 DNASU:6155
Ensembl:ENST00000253788 GeneID:6155 KEGG:hsa:6155 UCSC:uc002icj.3
GeneCards:GC17P041150 HGNC:HGNC:10328 HPA:HPA002649 MIM:607526
neXtProt:NX_P61353 PharmGKB:PA34707 InParanoid:P61353
PhylomeDB:P61353 ChiTaRS:RPL27 GenomeRNAi:6155 NextBio:23903
ArrayExpress:P61353 Bgee:P61353 CleanEx:HS_RPL27
Genevestigator:P61353 GermOnline:ENSG00000131469 Uniprot:P61353
Length = 136
Score = 182 (69.1 bits), Expect = 4.7e-22, Sum P(2) = 4.7e-22
Identities = 38/79 (48%), Positives = 53/79 (67%)
Query: 20 GRKVVI--SRVEAFVKLVNYQHLMPTRYTLNIDL-KEVLTADSLQSKDKKVTACKETKKR 76
G+K + S++++FVK+ NY HLMPTRY+++I L K V+ D + K A +E K +
Sbjct: 58 GKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVK 117
Query: 77 LEERFKTGKNCWFFTKLGF 95
EER+KTGKN WFF KL F
Sbjct: 118 FEERYKTGKNKWFFQKLRF 136
Score = 89 (36.4 bits), Expect = 4.7e-22, Sum P(2) = 4.7e-22
Identities = 17/25 (68%), Positives = 21/25 (84%)
Query: 1 MVKFLKPNKVVILLQGRYAGRKVVI 25
M KF+KP KVV++L GRY+GRK VI
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVI 25
>UNIPROTKB|A1XQU5 [details] [associations]
symbol:RPL27 "60S ribosomal protein L27" species:9823 "Sus
scrofa" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR001141 InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396
PROSITE:PS01107 Pfam:PF00467 GO:GO:0006412 GO:GO:0003735
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0022625
InterPro:IPR005824 SMART:SM00739 KO:K02901 PANTHER:PTHR10497
CTD:6155 HOVERGEN:HBG050005 EMBL:DQ629167 RefSeq:NP_001090948.1
UniGene:Ssc.13574 ProteinModelPortal:A1XQU5 SMR:A1XQU5 PRIDE:A1XQU5
GeneID:100037995 KEGG:ssc:100037995 Uniprot:A1XQU5
Length = 136
Score = 182 (69.1 bits), Expect = 4.7e-22, Sum P(2) = 4.7e-22
Identities = 38/79 (48%), Positives = 53/79 (67%)
Query: 20 GRKVVI--SRVEAFVKLVNYQHLMPTRYTLNIDL-KEVLTADSLQSKDKKVTACKETKKR 76
G+K + S++++FVK+ NY HLMPTRY+++I L K V+ D + K A +E K +
Sbjct: 58 GKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVK 117
Query: 77 LEERFKTGKNCWFFTKLGF 95
EER+KTGKN WFF KL F
Sbjct: 118 FEERYKTGKNKWFFQKLRF 136
Score = 89 (36.4 bits), Expect = 4.7e-22, Sum P(2) = 4.7e-22
Identities = 17/25 (68%), Positives = 21/25 (84%)
Query: 1 MVKFLKPNKVVILLQGRYAGRKVVI 25
M KF+KP KVV++L GRY+GRK VI
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVI 25
>UNIPROTKB|I3LIX1 [details] [associations]
symbol:RPL27 "60S ribosomal protein L27" species:9823 "Sus
scrofa" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR001141 InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396
PROSITE:PS01107 Pfam:PF00467 GO:GO:0006412 GO:GO:0003735
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0022625
InterPro:IPR005824 SMART:SM00739 PANTHER:PTHR10497 OMA:FNYNHLM
GeneTree:ENSGT00390000010721 EMBL:FP340289
Ensembl:ENSSSCT00000026116 Uniprot:I3LIX1
Length = 135
Score = 182 (69.1 bits), Expect = 4.7e-22, Sum P(2) = 4.7e-22
Identities = 38/79 (48%), Positives = 53/79 (67%)
Query: 20 GRKVVI--SRVEAFVKLVNYQHLMPTRYTLNIDL-KEVLTADSLQSKDKKVTACKETKKR 76
G+K + S++++FVK+ NY HLMPTRY+++I L K V+ D + K A +E K +
Sbjct: 57 GKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVK 116
Query: 77 LEERFKTGKNCWFFTKLGF 95
EER+KTGKN WFF KL F
Sbjct: 117 FEERYKTGKNKWFFQKLRF 135
Score = 89 (36.4 bits), Expect = 4.7e-22, Sum P(2) = 4.7e-22
Identities = 17/25 (68%), Positives = 21/25 (84%)
Query: 1 MVKFLKPNKVVILLQGRYAGRKVVI 25
M KF+KP KVV++L GRY+GRK VI
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVI 25
>RGD|621192 [details] [associations]
symbol:Rpl27 "ribosomal protein L27" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IEA;ISO] [GO:0030529
"ribonucleoprotein complex" evidence=ISO] InterPro:IPR001141
InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396 PROSITE:PS01107
RGD:621192 Pfam:PF00467 GO:GO:0006412 GO:GO:0003735
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0022625
InterPro:IPR005824 SMART:SM00739 eggNOG:COG2163
HOGENOM:HOG000210138 KO:K02901 PANTHER:PTHR10497 OMA:FNYNHLM
GeneTree:ENSGT00390000010721 CTD:6155 HOVERGEN:HBG050005
OrthoDB:EOG48SGVG EMBL:X07424 EMBL:BC058474 EMBL:BC091566
IPI:IPI00231360 PIR:S00401 RefSeq:NP_071959.1 UniGene:Rn.1254
ProteinModelPortal:P61354 SMR:P61354 IntAct:P61354 STRING:P61354
PRIDE:P61354 Ensembl:ENSRNOT00000028060 GeneID:64306 KEGG:rno:64306
UCSC:RGD:621192 InParanoid:P61354 NextBio:612950
Genevestigator:P61354 GermOnline:ENSRNOG00000020674 Uniprot:P61354
Length = 136
Score = 182 (69.1 bits), Expect = 4.7e-22, Sum P(2) = 4.7e-22
Identities = 38/79 (48%), Positives = 53/79 (67%)
Query: 20 GRKVVI--SRVEAFVKLVNYQHLMPTRYTLNIDL-KEVLTADSLQSKDKKVTACKETKKR 76
G+K + S++++FVK+ NY HLMPTRY+++I L K V+ D + K A +E K +
Sbjct: 58 GKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVK 117
Query: 77 LEERFKTGKNCWFFTKLGF 95
EER+KTGKN WFF KL F
Sbjct: 118 FEERYKTGKNKWFFQKLRF 136
Score = 89 (36.4 bits), Expect = 4.7e-22, Sum P(2) = 4.7e-22
Identities = 17/25 (68%), Positives = 21/25 (84%)
Query: 1 MVKFLKPNKVVILLQGRYAGRKVVI 25
M KF+KP KVV++L GRY+GRK VI
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVI 25
>RGD|1585224 [details] [associations]
symbol:Rpl27-l1 "ribosomal protein L27-like 1" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001141
InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396 PROSITE:PS01107
RGD:1585224 Pfam:PF00467 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR005824
SMART:SM00739 PANTHER:PTHR10497 OMA:GTSEKQY
GeneTree:ENSGT00390000010721 OrthoDB:EOG48SGVG IPI:IPI00188985
RefSeq:XP_001068279.1 RefSeq:XP_002727618.1 PRIDE:D4AD41
Ensembl:ENSRNOT00000047308 GeneID:688784 KEGG:rno:688784 CTD:688784
NextBio:737238 Uniprot:D4AD41
Length = 136
Score = 181 (68.8 bits), Expect = 6.0e-22, Sum P(2) = 6.0e-22
Identities = 38/79 (48%), Positives = 53/79 (67%)
Query: 20 GRKVVI--SRVEAFVKLVNYQHLMPTRYTLNIDL-KEVLTADSLQSKDKKVTACKETKKR 76
G+K + S++++FVKL NY HL+PTRY+++I L K V+ D + K A +E K +
Sbjct: 58 GKKKIAKRSKIKSFVKLYNYNHLVPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVK 117
Query: 77 LEERFKTGKNCWFFTKLGF 95
EER+KTGKN WFF KL F
Sbjct: 118 FEERYKTGKNKWFFQKLHF 136
Score = 89 (36.4 bits), Expect = 6.0e-22, Sum P(2) = 6.0e-22
Identities = 17/25 (68%), Positives = 21/25 (84%)
Query: 1 MVKFLKPNKVVILLQGRYAGRKVVI 25
M KF+KP KVV++L GRY+GRK VI
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVI 25
>UNIPROTKB|Q9XSU7 [details] [associations]
symbol:RPL27 "60S ribosomal protein L27" species:9615
"Canis lupus familiaris" [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001141
InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396 PROSITE:PS01107
Pfam:PF00467 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR005824
SMART:SM00739 eggNOG:COG2163 HOGENOM:HOG000210138 KO:K02901
PANTHER:PTHR10497 CTD:6155 HOVERGEN:HBG050005 OrthoDB:EOG48SGVG
EMBL:AJ388516 RefSeq:NP_001003102.2 UniGene:Cfa.28035
ProteinModelPortal:Q9XSU7 STRING:Q9XSU7 GeneID:403688
KEGG:cfa:403688 InParanoid:Q9XSU7 NextBio:20817192 Uniprot:Q9XSU7
Length = 136
Score = 179 (68.1 bits), Expect = 9.7e-22, Sum P(2) = 9.7e-22
Identities = 37/79 (46%), Positives = 53/79 (67%)
Query: 20 GRKVVI--SRVEAFVKLVNYQHLMPTRYTLNIDL-KEVLTADSLQSKDKKVTACKETKKR 76
G+K + S++++FVK+ NY HLMPTRY+++I L K V+ D + K A +E K +
Sbjct: 58 GKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVK 117
Query: 77 LEERFKTGKNCWFFTKLGF 95
EE++KTGKN WFF KL F
Sbjct: 118 FEEKYKTGKNKWFFQKLRF 136
Score = 89 (36.4 bits), Expect = 9.7e-22, Sum P(2) = 9.7e-22
Identities = 17/25 (68%), Positives = 21/25 (84%)
Query: 1 MVKFLKPNKVVILLQGRYAGRKVVI 25
M KF+KP KVV++L GRY+GRK VI
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVI 25
>UNIPROTKB|E2QVG7 [details] [associations]
symbol:RPL27 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001141
Pfam:PF01777 ProDom:PD009396 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.30.30.30 InterPro:IPR014722
PANTHER:PTHR10497 GeneTree:ENSGT00390000010721 OMA:VIVRSFD
EMBL:AAEX03017288 Ensembl:ENSCAFT00000020952 Uniprot:E2QVG7
Length = 134
Score = 166 (63.5 bits), Expect = 8.4e-21, Sum P(2) = 8.4e-21
Identities = 35/77 (45%), Positives = 51/77 (66%)
Query: 20 GRKVVI--SRVEAFVKLVNYQHLMPTRYTLNIDL-KEVLTADSLQSKDKKVTACKETKKR 76
G+K + S++++FVK+ NY HLMPTRY+++I L K V+ D + K A +E K +
Sbjct: 56 GKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKCKARREAKVK 115
Query: 77 LEERFKTGKNCWFFTKL 93
EER+KTGKN +FF L
Sbjct: 116 FEERYKTGKNKYFFQSL 132
Score = 93 (37.8 bits), Expect = 8.4e-21, Sum P(2) = 8.4e-21
Identities = 18/25 (72%), Positives = 22/25 (88%)
Query: 1 MVKFLKPNKVVILLQGRYAGRKVVI 25
M KF+KP KVV++L GRY+GRKVVI
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKVVI 25
>RGD|1565900 [details] [associations]
symbol:RGD1565900 "similar to ribosomal protein L27"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001141 Pfam:PF01777 ProDom:PD009396 RGD:1565900
Pfam:PF00467 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR005824
SMART:SM00739 PANTHER:PTHR10497 OrthoDB:EOG48SGVG IPI:IPI00368970
RefSeq:XP_003750581.1 RefSeq:XP_003754482.1 RefSeq:XP_213135.1
PRIDE:D3ZYF9 Ensembl:ENSRNOT00000044219 GeneID:100912027
GeneID:300833 KEGG:rno:100912027 KEGG:rno:300833 UCSC:RGD:1565900
CTD:300833 OMA:VANDFDI NextBio:647598 Uniprot:D3ZYF9
Length = 136
Score = 161 (61.7 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 35/79 (44%), Positives = 50/79 (63%)
Query: 20 GRKVVI--SRVEAFVKLVNYQHLMPTRYTLNIDL-KEVLTADSLQSKDKKVTACKETKKR 76
G+K + S++++FVK+ NY H MPTRY+++I L K V+ D + K A +E K +
Sbjct: 58 GKKKITKQSKIKSFVKVYNYNHFMPTRYSVDIPLDKTVVNKDVFRDSALKRKARREVKVK 117
Query: 77 LEERFKTGKNCWFFTKLGF 95
EER+KTGKN FF K F
Sbjct: 118 FEERYKTGKNKRFFQKFRF 136
Score = 83 (34.3 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 16/25 (64%), Positives = 20/25 (80%)
Query: 1 MVKFLKPNKVVILLQGRYAGRKVVI 25
M K +KP KVV++L GRY+GRK VI
Sbjct: 1 MGKLMKPGKVVLVLAGRYSGRKAVI 25
>FB|FBgn0039359 [details] [associations]
symbol:RpL27 "Ribosomal protein L27" species:7227 "Drosophila
melanogaster" [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0006412 "translation" evidence=ISS] [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS] [GO:0000022
"mitotic spindle elongation" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0051297 "centrosome
organization" evidence=IMP] [GO:0051298 "centrosome duplication"
evidence=IMP] InterPro:IPR001141 InterPro:IPR018262 Pfam:PF01777
ProDom:PD009396 PROSITE:PS01107 Pfam:PF00467 EMBL:AE014297
GO:GO:0051298 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0000022 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR005824 SMART:SM00739 eggNOG:COG2163 KO:K02901
PANTHER:PTHR10497 OMA:FNYNHLM GeneTree:ENSGT00390000010721 CTD:6155
ChiTaRS:RPL27 EMBL:AY070827 RefSeq:NP_651417.1 UniGene:Dm.6265
SMR:Q9VBN5 MINT:MINT-869626 STRING:Q9VBN5
EnsemblMetazoa:FBtr0084932 EnsemblMetazoa:FBtr0331360
EnsemblMetazoa:FBtr0331361 EnsemblMetazoa:FBtr0331362 GeneID:43103
KEGG:dme:Dmel_CG4759 FlyBase:FBgn0039359 InParanoid:Q9VBN5
OrthoDB:EOG41C5CR GenomeRNAi:43103 NextBio:832229 Uniprot:Q9VBN5
Length = 135
Score = 146 (56.5 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 32/71 (45%), Positives = 45/71 (63%)
Query: 26 SRVEAFVKLVNYQHLMPTRYTLNIDLK-EVLTADSLQSKDKKVTACKETKKRLEERFKTG 84
S+V+ F+K +NY HLMPTRYT + D+ E L+ L+ K+ T +T+ + E +K G
Sbjct: 66 SKVKPFLKSLNYNHLMPTRYTAH-DISFEKLSPKDLKDPVKRKTHRFQTRVKFESVYKEG 124
Query: 85 KNCWFFTKLGF 95
KN WFF KL F
Sbjct: 125 KNKWFFQKLRF 135
Score = 79 (32.9 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 15/25 (60%), Positives = 19/25 (76%)
Query: 1 MVKFLKPNKVVILLQGRYAGRKVVI 25
M K +K K+VI+L GRYAGRK +I
Sbjct: 1 MRKIMKQGKIVIVLSGRYAGRKAII 25
>ASPGD|ASPL0000016741 [details] [associations]
symbol:AN4222 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR001141 InterPro:IPR018262
Pfam:PF01777 ProDom:PD009396 PROSITE:PS01107 Pfam:PF00467
GO:GO:0006412 GO:GO:0005840 EMBL:BN001302 GO:GO:0003735
EMBL:AACD01000068 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR005824 eggNOG:COG2163 HOGENOM:HOG000210138 KO:K02901
PANTHER:PTHR10497 OMA:FNYNHLM OrthoDB:EOG496328 RefSeq:XP_661826.1
ProteinModelPortal:Q5B5F8 STRING:Q5B5F8
EnsemblFungi:CADANIAT00004439 GeneID:2873643 KEGG:ani:AN4222.2
Uniprot:Q5B5F8
Length = 135
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 41/82 (50%), Positives = 56/82 (68%)
Query: 17 RYAGRKVVI--SRVEAFVKLVNYQHLMPTRYTLNID-LKEVLTADSLQSKDKKVTACKET 73
R G+K V SR++ F+K+VNY HLMPTRYTL ++ LK +TAD+ + ++ A K
Sbjct: 54 RRMGKKTVEKRSRIKPFIKVVNYNHLMPTRYTLELEGLKGTVTADTFKEVSQREEAKKTI 113
Query: 74 KKRLEERFKTGKNCWFFTKLGF 95
KK LE+R+ +GKN WFFT L F
Sbjct: 114 KKALEDRYTSGKNRWFFTPLRF 135
>POMBASE|SPBC685.07c [details] [associations]
symbol:rpl2701 "60S ribosomal protein L27" species:4896
"Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic translation"
evidence=NAS] [GO:0003735 "structural constituent of ribosome"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006412 "translation" evidence=ISO]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISO]
InterPro:IPR001141 InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396
PROSITE:PS01107 PomBase:SPBC685.07c Pfam:PF00467 GO:GO:0005634
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003735 GO:GO:0002181
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0022625
InterPro:IPR005824 SMART:SM00739 HOGENOM:HOG000210138 KO:K02901
PANTHER:PTHR10497 EMBL:U97385 EMBL:AB015354 PIR:T40638 PIR:T43374
RefSeq:NP_596141.1 STRING:O14388 PRIDE:O14388
EnsemblFungi:SPBC685.07c.1 GeneID:2541156 KEGG:spo:SPBC685.07c
OMA:GTSEKQY OrthoDB:EOG496328 NextBio:20802269 Uniprot:O14388
Length = 136
Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 40/90 (44%), Positives = 58/90 (64%)
Query: 7 PNKVVILLQGRYAGRKVVISRVEAFVKLVNYQHLMPTRYTLNID-LKEVLTADSLQSKDK 65
P KV + + R+ SRV+ F+K+VNY HLMPTRY L +D LK ++TAD+ + +
Sbjct: 50 PLKVTKSMGAKRIARR---SRVKPFIKVVNYNHLMPTRYALELDNLKGLITADTFKEPTQ 106
Query: 66 KVTACKETKKRLEERFKTGKNCWFFTKLGF 95
+ A K KK EE++++GK+ WFFT L F
Sbjct: 107 RSAARKTVKKTFEEKYQSGKSAWFFTPLRF 136
Score = 86 (35.3 bits), Expect = 0.00057, P = 0.00057
Identities = 16/25 (64%), Positives = 21/25 (84%)
Query: 1 MVKFLKPNKVVILLQGRYAGRKVVI 25
MVK LKP KV ++ +GR+AG+KVVI
Sbjct: 1 MVKILKPGKVALITRGRFAGKKVVI 25
>RGD|1563835 [details] [associations]
symbol:RGD1563835 "similar to ribosomal protein L27"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001141 InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396
PROSITE:PS01107 RGD:1563835 Pfam:PF00467 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR005824 SMART:SM00739 PANTHER:PTHR10497 OMA:HRCARTA
GeneTree:ENSGT00390000010721 IPI:IPI00389219 RefSeq:XP_001069148.1
RefSeq:XP_573288.1 PRIDE:D3ZTK5 Ensembl:ENSRNOT00000042756
GeneID:498085 KEGG:rno:498085 UCSC:RGD:1563835 CTD:498085
OrthoDB:EOG4SQWZS NextBio:698627 Uniprot:D3ZTK5
Length = 135
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 41/90 (45%), Positives = 56/90 (62%)
Query: 7 PNKVVILLQGRYAGRKVVISRVEAFVKLVNYQHLMPTRYTLNIDL-KEVLTADSLQSKDK 65
P KV + + A R S++++FVK+ NY HLMPTRY+++I L K V+ D +
Sbjct: 50 PRKVTAAMGKKMAKR----SKIKSFVKVYNYSHLMPTRYSVDIPLDKTVVNKDVFRDPAL 105
Query: 66 KVTACKETKKRLEERFKTGKNCWFFTKLGF 95
K A +E K + EER+KTGKN WFF KL F
Sbjct: 106 KRKARREAKVKFEERYKTGKNKWFFQKLRF 135
Score = 84 (34.6 bits), Expect = 0.00093, P = 0.00093
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 1 MVKFLKPNKVVILLQGRYAGRK-VVISRVEAFVKLVNYQHLM 41
M KF+KP KVV++L GRY+G K V++ ++ Y H++
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGYKAVIVKNIDDGTSDRPYSHVL 42
>UNIPROTKB|G4ML54 [details] [associations]
symbol:MGG_06693 "60S ribosomal protein L27-A"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR001141 Pfam:PF01777
ProDom:PD009396 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:CM001231 GO:GO:0043581 Gene3D:2.30.30.30 InterPro:IPR014722
KO:K02901 PANTHER:PTHR10497 RefSeq:XP_003709402.1
ProteinModelPortal:G4ML54 EnsemblFungi:MGG_06693T0 GeneID:2684866
KEGG:mgr:MGG_06693 Uniprot:G4ML54
Length = 135
Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 36/71 (50%), Positives = 50/71 (70%)
Query: 26 SRVEAFVKLVNYQHLMPTRYTLNID-LKEVLTADSLQSKDKKVTACKETKKRLEERFKTG 84
++++ FVK+VNY HLMPTRYTL ++ LK +T D+ + ++ A K KK LEER+ +G
Sbjct: 65 NKIKPFVKVVNYNHLMPTRYTLELEGLKGSVTNDTFKEVSQREDAKKNVKKVLEERYTSG 124
Query: 85 KNCWFFTKLGF 95
KN WFFT L F
Sbjct: 125 KNRWFFTPLKF 135
Score = 90 (36.7 bits), Expect = 0.00021, P = 0.00021
Identities = 26/68 (38%), Positives = 39/68 (57%)
Query: 2 VKFLKPNKVVILLQGRYAGRKVVISR-VEAFVKLVNYQHLMPT---RYTLNIDLKEVLTA 57
+KFLK +V I+ +GR+AG+KVVI + V++ KL Y H + RY L I + T
Sbjct: 1 MKFLKVGRVAIITRGRFAGKKVVIIQPVDSGNKLHPYGHAIVAGIERYPLKITRRMSKTR 60
Query: 58 DSLQSKDK 65
++K K
Sbjct: 61 QEKRNKIK 68
>UNIPROTKB|K7ELC7 [details] [associations]
symbol:RPL27 "60S ribosomal protein L27" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR001141 InterPro:IPR018262
Pfam:PF01777 ProDom:PD009396 PROSITE:PS01107 EMBL:AC055866
Gene3D:2.30.30.30 InterPro:IPR014722 PANTHER:PTHR10497
HGNC:HGNC:10328 Ensembl:ENST00000586277 Uniprot:K7ELC7
Length = 144
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 38/79 (48%), Positives = 53/79 (67%)
Query: 20 GRKVVI--SRVEAFVKLVNYQHLMPTRYTLNIDL-KEVLTADSLQSKDKKVTACKETKKR 76
G+K + S++++FVK+ NY HLMPTRY+++I L K V+ D + K A +E K +
Sbjct: 66 GKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVK 125
Query: 77 LEERFKTGKNCWFFTKLGF 95
EER+KTGKN WFF KL F
Sbjct: 126 FEERYKTGKNKWFFQKLRF 144
>UNIPROTKB|K7EQQ9 [details] [associations]
symbol:RPL27 "60S ribosomal protein L27" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR001141 InterPro:IPR018262
Pfam:PF01777 ProDom:PD009396 PROSITE:PS01107 EMBL:CH471152
EMBL:AC055866 GO:GO:0005840 Gene3D:2.30.30.30 InterPro:IPR014722
PANTHER:PTHR10497 HGNC:HGNC:10328 Ensembl:ENST00000590864
Uniprot:K7EQQ9
Length = 80
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 38/79 (48%), Positives = 53/79 (67%)
Query: 20 GRKVVI--SRVEAFVKLVNYQHLMPTRYTLNIDL-KEVLTADSLQSKDKKVTACKETKKR 76
G+K + S++++FVK+ NY HLMPTRY+++I L K V+ D + K A +E K +
Sbjct: 2 GKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVK 61
Query: 77 LEERFKTGKNCWFFTKLGF 95
EER+KTGKN WFF KL F
Sbjct: 62 FEERYKTGKNKWFFQKLRF 80
>SGD|S000001052 [details] [associations]
symbol:RPL27A "Ribosomal 60S subunit protein L27A"
species:4932 "Saccharomyces cerevisiae" [GO:0022625 "cytosolic
large ribosomal subunit" evidence=TAS] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003735 "structural constituent
of ribosome" evidence=IEA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0002181 "cytoplasmic translation" evidence=TAS]
InterPro:IPR001141 InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396
PROSITE:PS01107 SGD:S000001052 EMBL:BK006934 GO:GO:0003735
GO:GO:0002181 EMBL:U10400 PDB:4B6A PDBsum:4B6A Gene3D:2.30.30.30
InterPro:IPR014722 GO:GO:0022625 PDB:3IZS PDB:3U5E PDB:3U5I
PDBsum:3IZS PDBsum:3U5E PDBsum:3U5I HOGENOM:HOG000210138 KO:K02901
PANTHER:PTHR10497 OMA:FNYNHLM OrthoDB:EOG496328 PIR:S46790
RefSeq:NP_011874.1 ProteinModelPortal:P0C2H6 SMR:P0C2H6
MINT:MINT-1325160 STRING:P0C2H6 EnsemblFungi:YHR010W GeneID:856401
KEGG:sce:YHR010W GeneTree:ENSGT00390000010721 NextBio:981934
Genevestigator:P0C2H6 GermOnline:YHR010W Uniprot:P0C2H6
Length = 136
Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 33/81 (40%), Positives = 55/81 (67%)
Query: 17 RYAGRKVVI-SRVEAFVKLVNYQHLMPTRYTLNID-LKEVLTADSLQSKDKKVTACKETK 74
++ +KV ++++ F+K+VNY HL+PTRYTL+++ K V++ ++ + ++ A K K
Sbjct: 56 KHGAKKVAKRTKIKPFIKVVNYNHLLPTRYTLDVEAFKSVVSTETFEQPSQREEAKKVVK 115
Query: 75 KRLEERFKTGKNCWFFTKLGF 95
K EER + GKN WFF+KL F
Sbjct: 116 KAFEERHQAGKNQWFFSKLRF 136
Score = 86 (35.3 bits), Expect = 0.00057, P = 0.00057
Identities = 16/25 (64%), Positives = 21/25 (84%)
Query: 1 MVKFLKPNKVVILLQGRYAGRKVVI 25
M KFLK KV ++++GRYAG+KVVI
Sbjct: 1 MAKFLKAGKVAVVVRGRYAGKKVVI 25
>SGD|S000002879 [details] [associations]
symbol:RPL27B "Ribosomal 60S subunit protein L27B"
species:4932 "Saccharomyces cerevisiae" [GO:0005622 "intracellular"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;TAS] [GO:0005840 "ribosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0002181
"cytoplasmic translation" evidence=TAS] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=TAS] InterPro:IPR001141
InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396 PROSITE:PS01107
SGD:S000002879 EMBL:BK006938 GO:GO:0003735 GO:GO:0002181
Gene3D:2.30.30.30 InterPro:IPR014722 EMBL:U33050 GO:GO:0022625
eggNOG:COG2163 HOGENOM:HOG000210138 KO:K02901 PANTHER:PTHR10497
OMA:GTSEKQY OrthoDB:EOG496328 GeneTree:ENSGT00390000010721
PIR:S69638 RefSeq:NP_010759.1 ProteinModelPortal:P0C2H7 SMR:P0C2H7
STRING:P0C2H7 PaxDb:P0C2H7 EnsemblFungi:YDR471W GeneID:852082
KEGG:sce:YDR471W NextBio:970394 Genevestigator:P0C2H7
Uniprot:P0C2H7
Length = 136
Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 33/81 (40%), Positives = 55/81 (67%)
Query: 17 RYAGRKVVI-SRVEAFVKLVNYQHLMPTRYTLNID-LKEVLTADSLQSKDKKVTACKETK 74
++ +KV ++++ F+K+VNY HL+PTRYTL+++ K V++ ++ + ++ A K K
Sbjct: 56 KHGAKKVAKRTKIKPFIKVVNYNHLLPTRYTLDVEAFKSVVSTETFEQPSQREEAKKVVK 115
Query: 75 KRLEERFKTGKNCWFFTKLGF 95
K EER + GKN WFF+KL F
Sbjct: 116 KAFEERHQAGKNQWFFSKLRF 136
Score = 86 (35.3 bits), Expect = 0.00057, P = 0.00057
Identities = 16/25 (64%), Positives = 21/25 (84%)
Query: 1 MVKFLKPNKVVILLQGRYAGRKVVI 25
M KFLK KV ++++GRYAG+KVVI
Sbjct: 1 MAKFLKAGKVAVVVRGRYAGKKVVI 25
>POMBASE|SPCC74.05 [details] [associations]
symbol:rpl2702 "60S ribosomal protein L27 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] InterPro:IPR001141
InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396 PROSITE:PS01107
PomBase:SPCC74.05 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0003735 GO:GO:0002181 Gene3D:2.30.30.30 InterPro:IPR014722
GO:GO:0022625 eggNOG:COG2163 HOGENOM:HOG000210138 KO:K02901
PANTHER:PTHR10497 OMA:FNYNHLM OrthoDB:EOG496328 PIR:T41589
RefSeq:NP_588378.1 MINT:MINT-4679882 STRING:O74538 PRIDE:O74538
EnsemblFungi:SPCC74.05.1 GeneID:2539336 KEGG:spo:SPCC74.05
NextBio:20800501 Uniprot:O74538
Length = 136
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 33/71 (46%), Positives = 47/71 (66%)
Query: 26 SRVEAFVKLVNYQHLMPTRYTLNID-LKEVLTADSLQSKDKKVTACKETKKRLEERFKTG 84
SRV+ F+K++NY HLMPTRY L +D LK ++T + ++ A K K EE+++TG
Sbjct: 66 SRVKPFIKVINYNHLMPTRYALELDNLKGLVTPTTFSEPSQRSAAKKTVKNTFEEKYQTG 125
Query: 85 KNCWFFTKLGF 95
K+ WFFT L F
Sbjct: 126 KSAWFFTPLRF 136
Score = 86 (35.3 bits), Expect = 0.00057, P = 0.00057
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 1 MVKFLKPNKVVILLQGRYAGRKVVI-SRVEAFVKLVNYQHLMPT---RYTLNI 49
MVK LKP KV ++ +GR+AG+KVVI V+ K + H + RY L +
Sbjct: 1 MVKILKPGKVALVTRGRFAGKKVVILQNVDQGSKSHPFGHAVVAGVERYPLKV 53
>WB|WBGene00004441 [details] [associations]
symbol:rpl-27 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] InterPro:IPR001141 InterPro:IPR018262 Pfam:PF01777
ProDom:PD009396 PROSITE:PS01107 Pfam:PF00467 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0006412 GO:GO:0018996
GO:GO:0000003 GO:GO:0005840 GO:GO:0003735 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR005824 SMART:SM00739 eggNOG:COG2163
HOGENOM:HOG000210138 KO:K02901 PANTHER:PTHR10497 OMA:FNYNHLM
GeneTree:ENSGT00390000010721 EMBL:U89308 EMBL:FO080940
RefSeq:NP_490905.1 UniGene:Cel.19696 ProteinModelPortal:P91914
SMR:P91914 STRING:P91914 PaxDb:P91914 EnsemblMetazoa:C53H9.1.1
EnsemblMetazoa:C53H9.1.2 GeneID:171750 KEGG:cel:CELE_C53H9.1
UCSC:C53H9.1.1 CTD:171750 WormBase:C53H9.1 InParanoid:P91914
NextBio:872543 Uniprot:P91914
Length = 136
Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 35/79 (44%), Positives = 54/79 (68%)
Query: 20 GRKVVISR--VEAFVKLVNYQHLMPTRYTLNIDL-KEVLTADSLQSKDKKVTACKETKKR 76
G+K + R ++ F+K+V+Y HL+PTRY++++ K + ++L++ KK A E K +
Sbjct: 58 GKKKIEKRNKLKPFLKVVSYTHLLPTRYSVDVAFDKTNINKEALKAPSKKRKALVEVKSK 117
Query: 77 LEERFKTGKNCWFFTKLGF 95
EER+KTGKN WFFTKL F
Sbjct: 118 FEERYKTGKNKWFFTKLRF 136
Score = 89 (36.4 bits), Expect = 0.00027, P = 0.00027
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 1 MVKFLKPNKVVILLQGRYAGRK-VVISRVEAFVKLVNYQHLMPT---RYTLNI 49
M K +KP KVV++L+G+YAGRK VV+ + + V Y H + RY L +
Sbjct: 1 MGKIMKPGKVVLVLRGKYAGRKAVVVKQQDEGVSDRTYPHAIIAGIDRYPLKV 53
>UNIPROTKB|E2R202 [details] [associations]
symbol:E2R202 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001141
Pfam:PF01777 ProDom:PD009396 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.30.30.30 InterPro:IPR014722
PANTHER:PTHR10497 GeneTree:ENSGT00390000010721 EMBL:AAEX03015530
Ensembl:ENSCAFT00000017248 OMA:SKLMEPP Uniprot:E2R202
Length = 117
Score = 87 (35.7 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 15/26 (57%), Positives = 23/26 (88%)
Query: 26 SRVEAFVKLVNYQHLMPTRYTLNIDL 51
S++++FVK+ NY HLMPTRY+++I L
Sbjct: 65 SKIKSFVKVYNYIHLMPTRYSVDIPL 90
Score = 84 (34.6 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 15/25 (60%), Positives = 19/25 (76%)
Query: 71 KETKKRLEERFKTGKNCWFFTKLGF 95
+E K + EER+KTG+N WFF KL F
Sbjct: 93 REAKIKFEERYKTGQNKWFFQKLRF 117
Score = 76 (31.8 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 21/65 (32%), Positives = 32/65 (49%)
Query: 1 MVKFLKPNKVVILLQGRYAGRKVVISRVEAFVKLVNYQHLMPTRYTLNIDLKEVLTADSL 60
M KF+KP KV+++L G Y+G K VI + + + P Y L + +DS
Sbjct: 1 MGKFMKPGKVMLVLAGGYSGHKAVIMK-----NIDDGTSDRPYSYALVAGIDRTPKSDSC 55
Query: 61 QSKDK 65
K+K
Sbjct: 56 HGKNK 60
>UNIPROTKB|F1MSX2 [details] [associations]
symbol:F1MSX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001141 Pfam:PF01777
ProDom:PD009396 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.30.30.30 InterPro:IPR014722 PANTHER:PTHR10497
GeneTree:ENSGT00390000010721 EMBL:DAAA02054982 IPI:IPI00718703
Ensembl:ENSBTAT00000005528 Uniprot:F1MSX2
Length = 136
Score = 116 (45.9 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 27/71 (38%), Positives = 41/71 (57%)
Query: 26 SRVEAFVKLVNYQHLMPTRYTLNIDL-KEVLTADSLQSKDKKVTACKETKKRLEERFKTG 84
S++++ K+ + L PT Y+++ L K V+ D + K A +E K + EER+KTG
Sbjct: 66 SKIKSSAKVYHSNQLRPTNYSVDNPLDKAVVNEDIFREPVVKRKAKREAKFKSEERYKTG 125
Query: 85 KNCWFFTKLGF 95
KN WF KL F
Sbjct: 126 KNRWFSQKLQF 136
Score = 42 (19.8 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 10 VVILLQGRYAGRKVVISR 27
V+++L G Y+ RK VI +
Sbjct: 10 VMLVLAGHYSERKAVIMK 27
>DICTYBASE|DDB_G0271298 [details] [associations]
symbol:rpl27 "S60 ribosomal protein L27"
species:44689 "Dictyostelium discoideum" [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003735 "structural constituent
of ribosome" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001141 InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396
PROSITE:PS01107 dictyBase:DDB_G0271298 GO:GO:0006412
GenomeReviews:CM000151_GR EMBL:AAFI02000006 GO:GO:0005840
GO:GO:0003735 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR005824 SMART:SM00739 eggNOG:COG2163 KO:K02901
PANTHER:PTHR10497 RefSeq:XP_645666.1 ProteinModelPortal:Q55BE6
STRING:Q55BE6 PRIDE:Q55BE6 EnsemblProtists:DDB0230153
GeneID:8617858 KEGG:ddi:DDB_G0271298 OMA:VIVRSFD
ProtClustDB:PTZ00471 Uniprot:Q55BE6
Length = 144
Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 34/88 (38%), Positives = 46/88 (52%)
Query: 17 RYAGRKVVISR--VEAFVKLVNYQHLMPTRYTLN-------IDLKEVLTADSLQSKDKKV 67
R RK ++ R + +FVK+VNY H+MPTRY LK +T +S Q +
Sbjct: 58 RSMSRKTILKRTAIRSFVKVVNYNHIMPTRYNFEGRDESAFTGLKNTVTVESSQVAKRAH 117
Query: 68 TACKETKKRLEERFKTGKNCWFFTKLGF 95
T KK E + K GK+ WFF+KL F
Sbjct: 118 TRLA-VKKIFEAKHKAGKSKWFFSKLRF 144
Score = 86 (35.3 bits), Expect = 0.00057, P = 0.00057
Identities = 15/23 (65%), Positives = 20/23 (86%)
Query: 3 KFLKPNKVVILLQGRYAGRKVVI 25
KF+KP ++VILL G+YAGRK V+
Sbjct: 4 KFIKPGRLVILLNGKYAGRKAVV 26
>RGD|1587075 [details] [associations]
symbol:LOC680808 "hypothetical protein LOC680808" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001141
Pfam:PF01777 ProDom:PD009396 RGD:1587075 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:2.30.30.30 InterPro:IPR014722
PANTHER:PTHR10497 IPI:IPI00566947 Ensembl:ENSRNOT00000052132
Uniprot:F1M0X8
Length = 128
Score = 87 (35.7 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 24/69 (34%), Positives = 38/69 (55%)
Query: 20 GRKVVI--SRVEAFVKLVNYQHLMPTRYTLNI--DLKEVLTADSLQSKDKKVTACKETKK 75
G+K + S++E+FVK NY HLMPTRY+++I D V +L+ + E K
Sbjct: 57 GKKKIAKRSKMESFVKDYNYSHLMPTRYSVDIPVDKTRVFRDPALKHNGR------EAKV 110
Query: 76 RLEERFKTG 84
+ +E + G
Sbjct: 111 KFKEAYTPG 119
Score = 58 (25.5 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 3 KFLKPNKVVILLQGRYAGRKVVI 25
KF+ P K ++ L G Y+G K V+
Sbjct: 3 KFMNPGKEMLFLAGCYSGHKAVV 25
>RGD|1561870 [details] [associations]
symbol:RGD1561870 "similar to ribosomal protein L27"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001141 Pfam:PF01777 ProDom:PD009396 RGD:1561870
GO:GO:0006412 EMBL:CH473956 GO:GO:0005840 GO:GO:0003735
PANTHER:PTHR10497 GeneTree:ENSGT00390000010721 OrthoDB:EOG48SGVG
IPI:IPI00561792 RefSeq:NP_001102806.1 UniGene:Rn.218653
Ensembl:ENSRNOT00000067026 GeneID:502353 KEGG:rno:502353
UCSC:RGD:1561870 CTD:502353 NextBio:711333 Uniprot:D3ZK92
Length = 102
Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 26 SRVEAFVKLVNYQHLMPTRYTLNIDL-KEVLTADSLQSKDKKVTACKETKKRLEERFKTG 84
S +++FV++ NY HL PTR ++I L K V+ + + K A E K + E+ KTG
Sbjct: 37 SEIKSFVRVENYNHLRPTRCPVDIPLDKTVVNKNIFRDPALKCKARWEAKVKFEDPLKTG 96
Query: 85 KNCWFF 90
+N WFF
Sbjct: 97 RNKWFF 102
>GENEDB_PFALCIPARUM|PF14_0579 [details] [associations]
symbol:PF14_0579 "ribosomal protein L27,
putative" species:5833 "Plasmodium falciparum" [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS]
InterPro:IPR001141 Pfam:PF01777 ProDom:PD009396 GO:GO:0006412
GO:GO:0003735 EMBL:AE014187 Gene3D:2.30.30.30 InterPro:IPR014722
GO:GO:0022625 InterPro:IPR005824 SMART:SM00739 HOGENOM:HOG000210138
KO:K02901 PANTHER:PTHR10497 RefSeq:XP_001348753.2
ProteinModelPortal:Q8IKM5 PRIDE:Q8IKM5
EnsemblProtists:PF14_0579:mRNA GeneID:812161 KEGG:pfa:PF14_0579
EuPathDB:PlasmoDB:PF3D7_1460700 ProtClustDB:CLSZ2431717
Uniprot:Q8IKM5
Length = 146
Score = 110 (43.8 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 25/58 (43%), Positives = 40/58 (68%)
Query: 21 RKVVI-SRVEAFVKLVNYQHLMPTRYTL--NIDLKEVLTADSLQSKDKKVTACKETKK 75
+K+V S+V+AF+K +N H++PTRY + + D+K + + D L+SK+KK KE KK
Sbjct: 60 KKIVKRSKVKAFIKCINVNHILPTRYQVANDFDIKSLASDDVLKSKNKK----KEVKK 113
>UNIPROTKB|Q8IKM5 [details] [associations]
symbol:PF14_0579 "60S ribosomal protein L27, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISS] InterPro:IPR001141
Pfam:PF01777 ProDom:PD009396 GO:GO:0006412 GO:GO:0003735
EMBL:AE014187 Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0022625
InterPro:IPR005824 SMART:SM00739 HOGENOM:HOG000210138 KO:K02901
PANTHER:PTHR10497 RefSeq:XP_001348753.2 ProteinModelPortal:Q8IKM5
PRIDE:Q8IKM5 EnsemblProtists:PF14_0579:mRNA GeneID:812161
KEGG:pfa:PF14_0579 EuPathDB:PlasmoDB:PF3D7_1460700
ProtClustDB:CLSZ2431717 Uniprot:Q8IKM5
Length = 146
Score = 110 (43.8 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 25/58 (43%), Positives = 40/58 (68%)
Query: 21 RKVVI-SRVEAFVKLVNYQHLMPTRYTL--NIDLKEVLTADSLQSKDKKVTACKETKK 75
+K+V S+V+AF+K +N H++PTRY + + D+K + + D L+SK+KK KE KK
Sbjct: 60 KKIVKRSKVKAFIKCINVNHILPTRYQVANDFDIKSLASDDVLKSKNKK----KEVKK 113
>RGD|1560069 [details] [associations]
symbol:RGD1560069 "similar to ribosomal protein L27"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001141 Pfam:PF01777 ProDom:PD009396 RGD:1560069
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.30.30.30
InterPro:IPR014722 PANTHER:PTHR10497 GeneTree:ENSGT00390000010721
OrthoDB:EOG48SGVG IPI:IPI00359730 Ensembl:ENSRNOT00000057891
UCSC:RGD:1560069 Uniprot:D4A7W3
Length = 137
Score = 98 (39.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 20 GRKVVI--SRVEAFVKLVNYQHLMPTRYTLNIDL-KEVLTADSLQSKDKKVTACKETKKR 76
G+K + S++++F K+ NY LMPTRY ++I L K V+ D + K A +E + +
Sbjct: 58 GKKKIAKRSKIKSFGKIYNYNFLMPTRYPMDIPLHKTVVNKDVCRDPALKYMARQEAEVK 117
Query: 77 LEER 80
EER
Sbjct: 118 SEER 121
>UNIPROTKB|D3ZZV8 [details] [associations]
symbol:D3ZZV8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001141
Pfam:PF01777 ProDom:PD009396 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.30.30.30 InterPro:IPR014722
PANTHER:PTHR10497 OrthoDB:EOG48SGVG IPI:IPI00780129 PRIDE:D3ZZV8
Ensembl:ENSRNOT00000054903 OMA:VTSIRRR Uniprot:D3ZZV8
Length = 137
Score = 97 (39.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 21/57 (36%), Positives = 35/57 (61%)
Query: 20 GRKVVI--SRVEAFVKLVNYQHLMPTRYTLNIDLKEVLTADSLQSKDKKVTACKETK 74
G+K + S++++FVK+ +Y HLMPTRY+++I K + D + K A +E K
Sbjct: 58 GKKKIAKRSKIKSFVKVYDYNHLMPTRYSVDIPDKTAVNKDVFRDPALKHKARREAK 114
>UNIPROTKB|K7ERY7 [details] [associations]
symbol:RPL27 "60S ribosomal protein L27" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR001141 Pfam:PF00467
EMBL:AC055866 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR005824 SMART:SM00739 PANTHER:PTHR10497 HGNC:HGNC:10328
Ensembl:ENST00000588830 Uniprot:K7ERY7
Length = 40
Score = 93 (37.8 bits), Expect = 0.00010, P = 0.00010
Identities = 18/28 (64%), Positives = 23/28 (82%)
Query: 1 MVKFLKPNKVVILLQGRYAGRKVVISRV 28
M KF+KP KVV++L GRY+GRK VI +V
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKV 28
>UNIPROTKB|D4A7I3 [details] [associations]
symbol:D4A7I3 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001141
Pfam:PF01777 ProDom:PD009396 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.30.30.30 InterPro:IPR014722
PANTHER:PTHR10497 GeneTree:ENSGT00390000010721 OrthoDB:EOG48SGVG
IPI:IPI00778616 Ensembl:ENSRNOT00000057689 Uniprot:D4A7I3
Length = 128
Score = 84 (34.6 bits), Expect = 0.00093, P = 0.00093
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 1 MVKFLKPNKVVILLQGRYAGRKVV-ISRVEAFVKLVNYQHLM 41
M KF+KP KVV++L GRY+GRK V + ++ Y H +
Sbjct: 1 MGKFMKPWKVVLILAGRYSGRKAVTVKNIDDGTSDQPYSHAL 42
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.137 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 95 95 0.00091 102 3 11 22 0.45 29
29 0.43 31
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 37
No. of states in DFA: 542 (58 KB)
Total size of DFA: 103 KB (2071 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 12.07u 0.10s 12.17t Elapsed: 00:00:01
Total cpu time: 12.07u 0.10s 12.17t Elapsed: 00:00:01
Start: Sat May 11 07:47:25 2013 End: Sat May 11 07:47:26 2013