Query 039580
Match_columns 149
No_of_seqs 170 out of 1453
Neff 10.7
Searched_HMMs 46136
Date Fri Mar 29 11:02:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039580.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/039580hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR02332 HpaX 4-hydroxyphenyl 99.9 2.8E-23 6E-28 151.2 12.9 147 2-148 4-150 (412)
2 PRK03545 putative arabinose tr 99.9 7.9E-22 1.7E-26 142.4 14.6 144 5-148 8-151 (390)
3 PRK14995 methyl viologen resis 99.9 4.9E-22 1.1E-26 147.6 13.7 148 1-148 1-149 (495)
4 KOG1330 Sugar transporter/spin 99.9 2.1E-22 4.5E-27 144.3 9.5 147 2-148 29-175 (493)
5 PRK03633 putative MFS family t 99.9 1.3E-21 2.7E-26 141.0 13.5 148 1-148 1-148 (381)
6 TIGR00891 2A0112 putative sial 99.9 1.5E-21 3.4E-26 140.7 13.4 146 3-148 9-154 (405)
7 PRK09556 uhpT sugar phosphate 99.9 5.7E-22 1.2E-26 146.3 8.3 142 7-148 30-176 (467)
8 PRK12307 putative sialic acid 99.9 5.8E-21 1.2E-25 139.2 12.6 144 5-148 17-160 (426)
9 PRK10213 nepI ribonucleoside t 99.9 1.4E-20 3.1E-25 136.2 14.0 138 11-148 25-162 (394)
10 COG2814 AraJ Arabinose efflux 99.9 3.4E-20 7.4E-25 132.3 15.4 144 5-148 12-155 (394)
11 TIGR00710 efflux_Bcr_CflA drug 99.9 1.6E-20 3.4E-25 134.8 13.8 146 3-148 2-147 (385)
12 PRK09705 cynX putative cyanate 99.9 3.2E-20 7E-25 134.4 14.2 125 23-148 26-150 (393)
13 TIGR00711 efflux_EmrB drug res 99.9 2.5E-20 5.4E-25 137.7 13.8 143 7-149 3-145 (485)
14 PRK03699 putative transporter; 99.8 2.5E-20 5.5E-25 134.9 13.2 147 2-148 3-149 (394)
15 PRK11551 putative 3-hydroxyphe 99.8 2.1E-20 4.5E-25 135.5 12.8 144 5-148 14-157 (406)
16 PRK10091 MFS transport protein 99.8 5.1E-20 1.1E-24 132.8 14.4 142 7-148 4-145 (382)
17 PRK10504 putative transporter; 99.8 4.9E-20 1.1E-24 136.0 13.5 144 5-148 9-152 (471)
18 PRK11663 regulatory protein Uh 99.8 4.1E-20 8.8E-25 135.4 12.6 143 6-148 23-165 (434)
19 TIGR01299 synapt_SV2 synaptic 99.8 4.2E-20 9.1E-25 141.9 13.1 142 6-147 167-308 (742)
20 PRK10406 alpha-ketoglutarate t 99.8 4.5E-20 9.7E-25 135.0 12.6 141 7-147 23-177 (432)
21 PRK12382 putative transporter; 99.8 1E-19 2.3E-24 131.4 13.8 144 5-148 14-166 (392)
22 PF07690 MFS_1: Major Facilita 99.8 8.9E-20 1.9E-24 129.3 12.9 137 12-148 2-139 (352)
23 PRK03893 putative sialic acid 99.8 8.8E-20 1.9E-24 135.3 12.9 145 4-148 18-162 (496)
24 TIGR00806 rfc RFC reduced fola 99.8 1.5E-19 3.2E-24 131.5 13.4 127 21-148 41-168 (511)
25 PRK10642 proline/glycine betai 99.8 1.6E-19 3.5E-24 134.1 13.6 143 5-147 15-171 (490)
26 PRK05122 major facilitator sup 99.8 1.1E-19 2.5E-24 131.4 12.0 146 3-148 12-166 (399)
27 PRK11195 lysophospholipid tran 99.8 1.2E-19 2.6E-24 131.4 12.0 137 9-148 6-142 (393)
28 TIGR00890 2A0111 Oxalate/Forma 99.8 1.1E-19 2.4E-24 129.6 11.6 141 5-147 3-143 (377)
29 PRK10133 L-fucose transporter; 99.8 2.8E-19 6.1E-24 131.2 13.6 142 7-148 27-171 (438)
30 COG2271 UhpC Sugar phosphate p 99.8 1.7E-20 3.6E-25 133.4 6.5 146 3-148 26-171 (448)
31 PRK15075 citrate-proton sympor 99.8 2E-19 4.4E-24 131.7 12.3 145 3-147 12-170 (434)
32 PRK10077 xylE D-xylose transpo 99.8 2.6E-19 5.7E-24 132.2 12.9 141 7-147 13-173 (479)
33 TIGR00886 2A0108 nitrite extru 99.8 2.8E-19 6.1E-24 127.7 12.4 138 9-147 4-143 (366)
34 TIGR00893 2A0114 d-galactonate 99.8 7.9E-20 1.7E-24 130.8 9.2 133 16-148 4-136 (399)
35 TIGR00900 2A0121 H+ Antiporter 99.8 2.1E-19 4.7E-24 127.8 11.2 137 12-148 5-146 (365)
36 PRK15403 multidrug efflux syst 99.8 6.2E-19 1.3E-23 128.5 13.7 134 15-148 25-158 (413)
37 TIGR00903 2A0129 major facilit 99.8 2.4E-19 5.3E-24 128.8 11.4 126 22-148 7-132 (368)
38 TIGR00895 2A0115 benzoate tran 99.8 2E-19 4.4E-24 129.2 11.0 143 6-148 17-159 (398)
39 TIGR00885 fucP L-fucose:H+ sym 99.8 8.2E-19 1.8E-23 127.8 13.5 142 7-148 4-148 (410)
40 PRK11652 emrD multidrug resist 99.8 9.5E-19 2.1E-23 126.5 13.7 144 5-148 7-150 (394)
41 PRK15402 multidrug efflux syst 99.8 9.5E-19 2.1E-23 127.0 13.5 138 11-148 18-155 (406)
42 PRK15034 nitrate/nitrite trans 99.8 1.4E-18 3E-23 127.3 13.5 140 6-146 34-179 (462)
43 PRK10054 putative transporter; 99.8 1.9E-18 4.2E-23 125.2 14.0 144 5-148 6-150 (395)
44 cd06174 MFS The Major Facilita 99.8 8.6E-19 1.9E-23 123.8 11.8 139 10-148 3-141 (352)
45 PLN00028 nitrate transmembrane 99.8 1.8E-18 3.9E-23 128.1 13.9 141 6-147 36-176 (476)
46 PRK10473 multidrug efflux syst 99.8 1.7E-18 3.6E-23 125.2 13.3 139 10-148 7-145 (392)
47 TIGR00881 2A0104 phosphoglycer 99.8 1.3E-19 2.9E-24 129.3 6.7 134 14-147 3-136 (379)
48 TIGR00894 2A0114euk Na(+)-depe 99.8 4.6E-19 9.9E-24 130.7 9.7 145 4-148 17-185 (465)
49 PRK11273 glpT sn-glycerol-3-ph 99.8 1.3E-18 2.7E-23 128.1 10.9 135 9-144 32-170 (452)
50 PRK11043 putative transporter; 99.8 5.8E-18 1.3E-22 122.7 13.7 134 15-148 15-148 (401)
51 TIGR00887 2A0109 phosphate:H+ 99.8 3E-18 6.5E-23 127.6 12.5 143 6-148 16-169 (502)
52 PRK11646 multidrug resistance 99.8 5.1E-18 1.1E-22 123.2 13.3 140 9-148 13-153 (400)
53 PRK09952 shikimate transporter 99.8 4.5E-18 9.7E-23 124.8 12.6 143 4-147 20-178 (438)
54 PRK11102 bicyclomycin/multidru 99.8 3.8E-18 8.3E-23 122.5 11.5 126 23-148 8-133 (377)
55 TIGR00897 2A0118 polyol permea 99.8 8.2E-18 1.8E-22 122.1 13.2 143 5-147 12-159 (402)
56 TIGR00879 SP MFS transporter, 99.8 3.6E-18 7.7E-23 125.2 10.5 133 16-148 38-181 (481)
57 PRK09874 drug efflux system pr 99.8 1.9E-17 4.1E-22 119.9 14.1 143 5-148 13-160 (408)
58 TIGR00712 glpT glycerol-3-phos 99.8 6E-18 1.3E-22 124.1 10.4 143 5-148 26-172 (438)
59 TIGR00924 yjdL_sub1_fam amino 99.8 1.1E-17 2.4E-22 123.9 11.2 145 4-148 8-159 (475)
60 PRK10207 dipeptide/tripeptide 99.8 1.2E-17 2.5E-22 124.1 11.1 146 3-148 11-161 (489)
61 TIGR00892 2A0113 monocarboxyla 99.7 6E-17 1.3E-21 119.4 12.7 129 19-148 32-161 (455)
62 TIGR00898 2A0119 cation transp 99.7 8.2E-18 1.8E-22 125.2 7.7 122 27-148 110-234 (505)
63 PRK10489 enterobactin exporter 99.7 1.6E-17 3.4E-22 121.1 8.7 140 9-148 20-164 (417)
64 TIGR00896 CynX cyanate transpo 99.7 6.9E-17 1.5E-21 115.4 11.6 124 23-148 17-140 (355)
65 TIGR00805 oat sodium-independe 99.7 6.2E-18 1.3E-22 128.8 4.5 140 9-148 36-226 (633)
66 PTZ00207 hypothetical protein; 99.7 3.6E-16 7.8E-21 117.6 13.8 124 20-145 41-170 (591)
67 TIGR00899 2A0120 sugar efflux 99.7 7.7E-16 1.7E-20 110.3 12.4 136 13-148 4-143 (375)
68 COG2223 NarK Nitrate/nitrite t 99.7 1.1E-16 2.5E-21 113.9 7.4 141 3-145 11-154 (417)
69 TIGR00902 2A0127 phenyl propri 99.6 7.9E-15 1.7E-19 105.9 14.0 140 8-148 207-347 (382)
70 PRK11551 putative 3-hydroxyphe 99.6 6.8E-15 1.5E-19 106.7 13.7 126 24-149 238-363 (406)
71 KOG2615 Permease of the major 99.6 6.5E-16 1.4E-20 109.0 7.2 109 40-149 67-175 (451)
72 PRK09584 tppB putative tripept 99.6 4.7E-15 1E-19 110.6 12.1 143 6-148 21-168 (500)
73 PRK15462 dipeptide/tripeptide 99.6 5.1E-15 1.1E-19 109.6 12.0 144 5-148 8-156 (493)
74 PRK08633 2-acyl-glycerophospho 99.6 4.5E-15 9.7E-20 119.6 12.5 142 7-148 10-157 (1146)
75 TIGR00895 2A0115 benzoate tran 99.6 1.5E-14 3.4E-19 103.9 13.9 135 15-149 259-393 (398)
76 KOG3764 Vesicular amine transp 99.6 4.4E-15 9.6E-20 105.4 10.5 115 35-149 100-215 (464)
77 TIGR00883 2A0106 metabolite-pr 99.6 2E-15 4.3E-20 108.3 9.0 133 16-148 3-150 (394)
78 cd06174 MFS The Major Facilita 99.6 9.7E-15 2.1E-19 103.2 12.2 138 11-148 180-319 (352)
79 COG0738 FucP Fucose permease [ 99.6 1.5E-14 3.3E-19 102.8 12.9 143 7-149 14-159 (422)
80 TIGR00900 2A0121 H+ Antiporter 99.6 1.4E-14 3E-19 103.1 12.9 122 27-148 232-355 (365)
81 TIGR00890 2A0111 Oxalate/Forma 99.6 6.7E-15 1.5E-19 105.0 11.3 123 26-148 225-349 (377)
82 TIGR01299 synapt_SV2 synaptic 99.6 1.6E-14 3.5E-19 111.4 13.1 103 46-148 600-702 (742)
83 KOG0254 Predicted transporter 99.6 1.8E-14 3.9E-19 107.8 12.7 105 42-146 90-194 (513)
84 KOG2532 Permease of the major 99.6 6.5E-15 1.4E-19 108.5 9.0 113 34-146 66-180 (466)
85 TIGR00901 2A0125 AmpG-related 99.6 8.6E-14 1.9E-18 99.4 14.4 128 13-140 216-355 (356)
86 TIGR00880 2_A_01_02 Multidrug 99.6 7.2E-15 1.6E-19 91.1 7.7 101 48-148 5-105 (141)
87 PRK15011 sugar efflux transpor 99.6 1E-13 2.2E-18 100.5 14.3 122 26-148 236-358 (393)
88 KOG2533 Permease of the major 99.6 3.3E-14 7.1E-19 105.3 11.4 117 32-148 72-188 (495)
89 TIGR00889 2A0110 nucleoside tr 99.6 4E-14 8.8E-19 103.5 11.5 123 26-148 228-363 (418)
90 TIGR00891 2A0112 putative sial 99.6 8.9E-14 1.9E-18 100.4 12.9 121 28-148 261-382 (405)
91 TIGR00883 2A0106 metabolite-pr 99.6 5.6E-14 1.2E-18 100.9 11.6 141 8-148 221-367 (394)
92 PRK06814 acylglycerophosphoeth 99.6 4.3E-14 9.3E-19 114.1 12.1 108 41-148 52-162 (1140)
93 PF05977 MFS_3: Transmembrane 99.6 1.5E-13 3.3E-18 102.7 14.1 146 4-149 8-158 (524)
94 PRK11902 ampG muropeptide tran 99.6 1.6E-13 3.6E-18 99.7 13.4 135 12-148 5-148 (402)
95 KOG0255 Synaptic vesicle trans 99.6 2.6E-14 5.7E-19 107.0 9.2 111 34-145 111-221 (521)
96 TIGR00901 2A0125 AmpG-related 99.6 8.1E-14 1.8E-18 99.6 11.3 123 24-148 6-137 (356)
97 PRK15011 sugar efflux transpor 99.5 2.8E-13 6.1E-18 98.2 14.0 142 7-148 16-161 (393)
98 TIGR00899 2A0120 sugar efflux 99.5 4E-13 8.7E-18 96.3 14.5 119 29-148 223-341 (375)
99 PRK10642 proline/glycine betai 99.5 2.5E-13 5.4E-18 101.2 13.6 128 20-147 264-395 (490)
100 PRK11128 putative 3-phenylprop 99.5 3.3E-13 7.2E-18 97.5 13.9 137 11-148 210-347 (382)
101 PRK10489 enterobactin exporter 99.5 2.6E-13 5.7E-18 99.0 13.3 124 25-148 242-366 (417)
102 TIGR00711 efflux_EmrB drug res 99.5 2.2E-13 4.8E-18 100.8 12.6 134 15-148 264-402 (485)
103 PF11700 ATG22: Vacuole efflux 99.5 4E-13 8.6E-18 99.5 13.7 146 4-149 279-435 (477)
104 TIGR00892 2A0113 monocarboxyla 99.5 4.5E-13 9.8E-18 99.0 14.0 141 9-149 244-388 (455)
105 PRK12382 putative transporter; 99.5 1.9E-13 4.1E-18 98.9 11.8 122 25-148 235-356 (392)
106 TIGR00902 2A0127 phenyl propri 99.5 1.4E-13 3.1E-18 99.4 11.1 136 11-148 9-146 (382)
107 PRK11010 ampG muropeptide tran 99.5 3.6E-13 7.7E-18 100.4 13.3 139 8-148 14-161 (491)
108 PRK09556 uhpT sugar phosphate 99.5 5.5E-13 1.2E-17 98.8 13.9 141 8-148 260-404 (467)
109 PRK10504 putative transporter; 99.5 4.1E-13 8.8E-18 99.3 13.1 140 9-148 264-407 (471)
110 PRK05122 major facilitator sup 99.5 5E-13 1.1E-17 96.9 12.7 122 25-148 235-356 (399)
111 PRK14995 methyl viologen resis 99.5 5E-13 1.1E-17 99.7 12.8 123 26-148 279-405 (495)
112 PRK09874 drug efflux system pr 99.5 6.3E-13 1.4E-17 96.4 12.8 124 25-148 238-365 (408)
113 PRK09528 lacY galactoside perm 99.5 4.1E-13 8.9E-18 98.1 11.7 113 36-148 257-370 (420)
114 PRK03633 putative MFS family t 99.5 7.2E-13 1.6E-17 95.7 12.7 119 27-148 221-339 (381)
115 TIGR00897 2A0118 polyol permea 99.5 1.3E-12 2.8E-17 95.1 13.9 138 9-148 225-368 (402)
116 KOG2504 Monocarboxylate transp 99.5 1.6E-13 3.4E-18 102.3 9.2 139 8-147 48-187 (509)
117 PRK11128 putative 3-phenylprop 99.5 2.9E-13 6.2E-18 97.8 10.3 131 14-148 12-146 (382)
118 PF00083 Sugar_tr: Sugar (and 99.5 8.6E-16 1.9E-20 112.9 -2.9 135 14-148 8-156 (451)
119 PRK03545 putative arabinose tr 99.5 1.4E-12 3.1E-17 94.4 13.8 121 26-148 226-347 (390)
120 PRK03699 putative transporter; 99.5 1.3E-12 2.9E-17 94.7 13.6 139 9-148 208-347 (394)
121 TIGR00882 2A0105 oligosacchari 99.5 5.3E-13 1.2E-17 96.8 11.3 140 7-148 3-151 (396)
122 PF07690 MFS_1: Major Facilita 99.5 3.3E-13 7.2E-18 95.7 9.9 132 16-147 216-352 (352)
123 PRK09952 shikimate transporter 99.5 1.6E-12 3.5E-17 95.6 13.7 130 19-148 263-398 (438)
124 TIGR00896 CynX cyanate transpo 99.5 2.7E-12 5.9E-17 91.7 13.0 134 14-148 205-340 (355)
125 TIGR00893 2A0114 d-galactonate 99.5 1.8E-12 3.8E-17 92.9 12.0 140 8-148 217-365 (399)
126 TIGR01301 GPH_sucrose GPH fami 99.5 2E-12 4.4E-17 95.6 12.3 136 13-148 11-170 (477)
127 PF06609 TRI12: Fungal trichot 99.5 2.4E-12 5.2E-17 97.0 12.8 118 23-142 61-178 (599)
128 PRK15075 citrate-proton sympor 99.5 2.1E-12 4.6E-17 94.8 12.3 126 22-147 254-385 (434)
129 PRK03893 putative sialic acid 99.4 1.1E-12 2.4E-17 97.5 10.7 123 26-148 295-420 (496)
130 PRK12307 putative sialic acid 99.4 2.4E-12 5.2E-17 94.0 12.2 124 25-148 250-375 (426)
131 PRK09528 lacY galactoside perm 99.4 1.6E-12 3.4E-17 95.1 10.4 143 4-148 8-159 (420)
132 COG2270 Permeases of the major 99.4 1.5E-12 3.4E-17 93.3 9.9 142 7-148 253-395 (438)
133 TIGR00879 SP MFS transporter, 99.4 3.4E-12 7.4E-17 93.7 12.1 137 12-148 290-437 (481)
134 KOG0252 Inorganic phosphate tr 99.4 1E-13 2.3E-18 100.1 3.6 140 8-147 43-197 (538)
135 TIGR00792 gph sugar (Glycoside 99.4 4.6E-12 1E-16 92.7 12.3 140 8-148 224-372 (437)
136 PRK11646 multidrug resistance 99.4 1.1E-11 2.5E-16 90.2 14.1 123 27-149 229-352 (400)
137 TIGR00889 2A0110 nucleoside tr 99.4 6E-12 1.3E-16 92.1 12.0 109 11-119 7-117 (418)
138 PRK09705 cynX putative cyanate 99.4 8.1E-12 1.7E-16 90.7 12.3 137 10-148 209-347 (393)
139 PF05977 MFS_3: Transmembrane 99.4 1.2E-11 2.5E-16 92.7 13.1 122 26-147 238-360 (524)
140 PRK08633 2-acyl-glycerophospho 99.4 8.8E-12 1.9E-16 100.8 13.0 120 28-147 255-375 (1146)
141 TIGR02718 sider_RhtX_FptX side 99.4 1.8E-11 3.9E-16 88.7 13.3 121 28-148 230-358 (390)
142 PRK10406 alpha-ketoglutarate t 99.4 2.6E-11 5.6E-16 89.0 13.5 119 22-140 259-382 (432)
143 TIGR02332 HpaX 4-hydroxyphenyl 99.4 2E-11 4.3E-16 89.2 12.7 140 10-149 246-388 (412)
144 PRK15402 multidrug efflux syst 99.4 3.1E-11 6.8E-16 87.8 13.6 121 27-148 236-362 (406)
145 KOG0569 Permease of the major 99.4 3.1E-11 6.8E-16 89.0 13.1 104 43-146 62-168 (485)
146 TIGR00881 2A0104 phosphoglycer 99.4 2.9E-11 6.3E-16 86.4 12.7 140 9-148 219-364 (379)
147 COG2807 CynX Cyanate permease 99.4 5.8E-11 1.3E-15 83.9 13.5 124 22-147 28-151 (395)
148 PRK10077 xylE D-xylose transpo 99.3 2.7E-11 5.8E-16 89.8 12.4 122 26-147 291-417 (479)
149 PRK10213 nepI ribonucleoside t 99.3 7.1E-11 1.5E-15 85.9 14.2 119 28-148 239-358 (394)
150 TIGR00882 2A0105 oligosacchari 99.3 3.3E-11 7E-16 87.5 12.3 112 37-148 250-362 (396)
151 PRK11195 lysophospholipid tran 99.3 4.9E-11 1.1E-15 86.7 12.7 117 30-147 230-347 (393)
152 PRK06814 acylglycerophosphoeth 99.3 1.6E-11 3.5E-16 99.4 11.0 141 8-148 227-388 (1140)
153 TIGR00710 efflux_Bcr_CflA drug 99.3 1.3E-10 2.8E-15 83.6 14.5 120 26-146 226-352 (385)
154 PRK11273 glpT sn-glycerol-3-ph 99.3 1E-10 2.3E-15 86.3 14.3 141 8-148 255-402 (452)
155 TIGR00903 2A0129 major facilit 99.3 4.1E-11 8.9E-16 86.4 11.5 139 6-148 192-334 (368)
156 TIGR00792 gph sugar (Glycoside 99.3 7.9E-12 1.7E-16 91.5 7.6 120 27-146 21-152 (437)
157 TIGR00887 2A0109 phosphate:H+ 99.3 4.7E-11 1E-15 89.3 11.8 131 18-148 300-446 (502)
158 PRK09848 glucuronide transport 99.3 3.9E-11 8.4E-16 88.5 11.2 142 7-148 229-380 (448)
159 PRK11663 regulatory protein Uh 99.3 1.1E-10 2.5E-15 85.8 13.4 140 10-149 247-392 (434)
160 PF13347 MFS_2: MFS/sugar tran 99.3 2.6E-11 5.7E-16 88.9 9.9 144 5-148 224-376 (428)
161 COG2814 AraJ Arabinose efflux 99.3 1.4E-10 3.1E-15 83.4 13.0 134 12-147 217-352 (394)
162 TIGR00898 2A0119 cation transp 99.3 9.1E-11 2E-15 87.6 11.7 103 46-148 360-464 (505)
163 TIGR01272 gluP glucose/galacto 99.3 2.1E-10 4.6E-15 81.0 12.8 138 8-148 142-282 (310)
164 PRK10054 putative transporter; 99.3 7.3E-11 1.6E-15 85.8 10.5 114 34-148 237-351 (395)
165 PRK11010 ampG muropeptide tran 99.2 4.1E-10 9E-15 84.1 14.1 121 27-147 244-369 (491)
166 PRK10091 MFS transport protein 99.2 4.2E-10 9E-15 81.4 13.7 119 28-148 222-342 (382)
167 PF03825 Nuc_H_symport: Nucleo 99.2 4.2E-10 9.1E-15 82.0 13.4 138 10-147 211-355 (400)
168 KOG2504 Monocarboxylate transp 99.2 6E-10 1.3E-14 83.4 14.1 144 6-149 298-443 (509)
169 KOG2325 Predicted transporter/ 99.2 1.6E-10 3.6E-15 85.0 10.6 146 2-148 30-183 (488)
170 PRK11102 bicyclomycin/multidru 99.2 1E-09 2.2E-14 79.0 14.4 118 29-147 218-340 (377)
171 PRK10133 L-fucose transporter; 99.2 3.6E-10 7.8E-15 83.3 12.1 116 29-147 282-398 (438)
172 PRK11043 putative transporter; 99.2 8.3E-10 1.8E-14 80.2 13.9 121 26-147 223-348 (401)
173 PRK10429 melibiose:sodium symp 99.2 2.7E-10 5.9E-15 84.7 11.6 143 6-148 231-385 (473)
174 TIGR00712 glpT glycerol-3-phos 99.2 3.9E-10 8.5E-15 83.0 11.7 135 14-148 259-400 (438)
175 PRK09669 putative symporter Ya 99.2 4.9E-10 1.1E-14 82.6 12.2 139 10-148 233-380 (444)
176 TIGR00886 2A0108 nitrite extru 99.2 3.1E-10 6.7E-15 81.2 10.6 127 15-142 234-365 (366)
177 PLN00028 nitrate transmembrane 99.2 2.9E-10 6.4E-15 84.6 9.6 122 26-148 272-401 (476)
178 PF06813 Nodulin-like: Nodulin 99.2 1.6E-09 3.5E-14 73.9 12.3 126 18-145 14-146 (250)
179 COG2223 NarK Nitrate/nitrite t 99.1 3.6E-10 7.8E-15 81.2 9.0 141 5-146 217-365 (417)
180 PRK09669 putative symporter Ya 99.1 3.3E-10 7.2E-15 83.5 8.8 121 27-147 31-163 (444)
181 TIGR00924 yjdL_sub1_fam amino 99.1 1.8E-09 4E-14 80.4 12.8 140 9-148 275-435 (475)
182 PRK10473 multidrug efflux syst 99.1 4.8E-09 1E-13 76.0 14.4 115 31-147 229-344 (392)
183 PRK10429 melibiose:sodium symp 99.1 5.7E-10 1.2E-14 83.0 8.8 136 10-145 10-158 (473)
184 PRK15034 nitrate/nitrite trans 99.1 2.5E-09 5.3E-14 79.1 11.9 140 7-147 253-419 (462)
185 PF05631 DUF791: Protein of un 99.1 7.9E-09 1.7E-13 73.3 13.6 105 15-120 43-147 (354)
186 COG0477 ProP Permeases of the 99.1 7.5E-09 1.6E-13 71.1 13.4 133 15-147 11-149 (338)
187 TIGR02718 sider_RhtX_FptX side 99.1 6.9E-09 1.5E-13 75.2 13.3 140 8-147 3-150 (390)
188 COG2271 UhpC Sugar phosphate p 99.1 8.3E-09 1.8E-13 74.5 13.0 144 4-147 250-400 (448)
189 PRK11902 ampG muropeptide tran 99.1 1E-08 2.3E-13 74.6 13.8 107 29-135 233-348 (402)
190 PRK11652 emrD multidrug resist 99.1 9.3E-09 2E-13 74.6 13.3 117 31-148 233-352 (394)
191 COG3104 PTR2 Dipeptide/tripept 99.1 4.1E-10 8.8E-15 82.5 6.2 144 5-148 20-173 (498)
192 TIGR00885 fucP L-fucose:H+ sym 99.0 8.3E-09 1.8E-13 75.5 12.9 135 11-148 237-373 (410)
193 KOG0569 Permease of the major 99.0 2.5E-08 5.4E-13 73.9 13.9 123 22-144 286-418 (485)
194 PRK09584 tppB putative tripept 99.0 1.6E-08 3.4E-13 75.9 13.0 104 43-146 318-434 (500)
195 TIGR00788 fbt folate/biopterin 99.0 6.1E-09 1.3E-13 77.5 10.6 123 7-131 27-156 (468)
196 PF03825 Nuc_H_symport: Nucleo 99.0 9.7E-09 2.1E-13 75.0 11.4 112 13-124 9-121 (400)
197 KOG2563 Permease of the major 99.0 6E-09 1.3E-13 75.7 9.6 144 3-147 42-193 (480)
198 KOG0253 Synaptic vesicle trans 99.0 1.4E-09 2.9E-14 77.6 5.9 138 7-146 79-216 (528)
199 TIGR00894 2A0114euk Na(+)-depe 99.0 2.1E-08 4.7E-13 74.3 12.2 141 7-148 262-414 (465)
200 PRK11462 putative transporter; 98.9 5.1E-08 1.1E-12 72.5 13.5 137 11-147 233-378 (460)
201 PRK10207 dipeptide/tripeptide 98.9 2.4E-08 5.2E-13 74.7 11.8 105 43-147 311-432 (489)
202 KOG0253 Synaptic vesicle trans 98.9 1.7E-09 3.6E-14 77.1 4.9 102 48-149 388-489 (528)
203 PF06779 DUF1228: Protein of u 98.9 1E-08 2.3E-13 58.2 7.1 79 19-97 5-83 (85)
204 KOG4686 Predicted sugar transp 98.9 3.5E-08 7.5E-13 68.4 10.4 140 7-148 265-406 (459)
205 PF05978 UNC-93: Ion channel r 98.9 9E-08 2E-12 60.9 11.1 99 48-147 44-142 (156)
206 TIGR00788 fbt folate/biopterin 98.8 1.8E-08 4E-13 74.9 8.2 116 33-148 280-405 (468)
207 PF12832 MFS_1_like: MFS_1 lik 98.8 2.9E-08 6.4E-13 55.7 7.1 68 13-80 7-74 (77)
208 COG2807 CynX Cyanate permease 98.8 1.9E-07 4.1E-12 66.5 12.0 142 6-148 208-351 (395)
209 PRK09848 glucuronide transport 98.8 8.8E-08 1.9E-12 70.8 10.7 125 13-137 15-153 (448)
210 PF01306 LacY_symp: LacY proto 98.8 3.6E-08 7.9E-13 71.7 7.8 121 3-123 4-133 (412)
211 KOG4686 Predicted sugar transp 98.7 1.9E-09 4.2E-14 74.5 -0.0 136 10-145 48-187 (459)
212 COG2211 MelB Na+/melibiose sym 98.7 1.6E-07 3.4E-12 69.3 9.2 143 5-147 235-387 (467)
213 PF13347 MFS_2: MFS/sugar tran 98.7 1.6E-08 3.4E-13 74.4 4.0 118 27-144 23-154 (428)
214 PRK11462 putative transporter; 98.7 2.8E-07 6E-12 68.6 10.2 135 13-147 16-163 (460)
215 PF01306 LacY_symp: LacY proto 98.7 1.3E-06 2.8E-11 63.8 13.3 107 39-145 257-364 (412)
216 PF03209 PUCC: PUCC protein; 98.7 2.4E-06 5.3E-11 61.8 14.5 128 19-146 221-353 (403)
217 KOG3762 Predicted transporter 98.7 7.5E-08 1.6E-12 71.5 6.5 116 33-148 398-518 (618)
218 PF03137 OATP: Organic Anion T 98.6 3.6E-09 7.7E-14 79.8 -0.6 138 10-147 7-194 (539)
219 KOG0254 Predicted transporter 98.6 2.9E-06 6.3E-11 64.0 13.2 136 5-141 294-442 (513)
220 PRK15403 multidrug efflux syst 98.6 5.1E-06 1.1E-10 61.0 14.1 137 8-145 220-362 (413)
221 TIGR00926 2A1704 Peptide:H+ sy 98.6 7.1E-07 1.5E-11 68.9 9.4 124 25-148 7-142 (654)
222 KOG3764 Vesicular amine transp 98.5 6.3E-07 1.4E-11 64.6 8.2 126 24-149 288-422 (464)
223 COG0738 FucP Fucose permease [ 98.5 1.5E-06 3.2E-11 62.7 10.0 140 5-147 235-375 (422)
224 PF06609 TRI12: Fungal trichot 98.4 6.1E-06 1.3E-10 63.0 11.7 142 6-147 310-458 (599)
225 KOG2615 Permease of the major 98.4 4.3E-06 9.4E-11 60.2 9.8 134 16-149 271-407 (451)
226 KOG2816 Predicted transporter 98.4 3E-06 6.5E-11 63.0 9.4 118 30-148 266-384 (463)
227 KOG2816 Predicted transporter 98.4 5.2E-06 1.1E-10 61.8 9.6 94 50-148 71-166 (463)
228 PRK15462 dipeptide/tripeptide 98.3 1.6E-05 3.5E-10 59.7 11.6 105 42-146 309-430 (493)
229 PF03209 PUCC: PUCC protein; 98.3 1.3E-05 2.7E-10 58.2 10.2 117 30-147 4-142 (403)
230 TIGR01301 GPH_sucrose GPH fami 98.3 6.9E-05 1.5E-09 56.1 13.7 141 6-146 258-434 (477)
231 KOG2532 Permease of the major 98.2 1.6E-05 3.4E-10 59.4 9.8 144 5-149 257-412 (466)
232 PF11700 ATG22: Vacuole efflux 98.2 5.6E-05 1.2E-09 56.7 11.8 103 43-145 72-203 (477)
233 PF00083 Sugar_tr: Sugar (and 98.1 5.9E-09 1.3E-13 76.8 -9.9 124 23-148 270-403 (451)
234 PF01770 Folate_carrier: Reduc 98.1 0.00013 2.9E-09 53.4 12.5 139 6-146 5-145 (412)
235 KOG2533 Permease of the major 98.1 3.5E-05 7.6E-10 57.9 9.6 141 7-147 274-421 (495)
236 COG2270 Permeases of the major 98.1 3E-05 6.5E-10 56.5 8.3 94 42-135 59-156 (438)
237 COG2211 MelB Na+/melibiose sym 98.0 5.4E-05 1.2E-09 56.2 8.9 135 11-145 17-164 (467)
238 PTZ00207 hypothetical protein; 98.0 0.00022 4.8E-09 54.8 12.3 140 5-145 352-502 (591)
239 KOG0637 Sucrose transporter an 98.0 4.5E-05 9.7E-10 56.2 7.6 139 9-147 35-196 (498)
240 KOG3626 Organic anion transpor 98.0 5.9E-06 1.3E-10 64.0 3.1 140 8-147 99-290 (735)
241 PF03092 BT1: BT1 family; Int 97.9 0.00023 4.9E-09 52.9 10.8 119 27-146 11-140 (433)
242 KOG0255 Synaptic vesicle trans 97.9 0.00057 1.2E-08 51.7 12.2 99 50-148 359-460 (521)
243 COG3104 PTR2 Dipeptide/tripept 97.8 0.001 2.2E-08 49.7 12.5 106 42-147 325-447 (498)
244 PF06963 FPN1: Ferroportin1 (F 97.8 0.0024 5.3E-08 47.4 14.1 118 25-142 277-404 (432)
245 TIGR00769 AAA ADP/ATP carrier 97.7 0.0017 3.6E-08 48.8 12.4 139 6-148 7-183 (472)
246 TIGR01272 gluP glucose/galacto 97.7 6.9E-05 1.5E-09 53.1 4.9 60 90-149 6-65 (310)
247 KOG0252 Inorganic phosphate tr 97.6 3E-05 6.5E-10 57.2 2.0 142 6-147 304-459 (538)
248 KOG3762 Predicted transporter 97.5 0.00011 2.3E-09 55.3 3.2 76 15-90 20-96 (618)
249 KOG3098 Uncharacterized conser 97.4 0.0017 3.6E-08 48.5 8.4 100 47-147 56-155 (461)
250 KOG4332 Predicted sugar transp 97.3 0.00012 2.5E-09 51.0 1.7 99 24-123 55-154 (454)
251 TIGR00805 oat sodium-independe 97.3 0.0015 3.2E-08 50.9 7.5 81 7-87 331-415 (633)
252 PF02487 CLN3: CLN3 protein; 97.1 0.0082 1.8E-07 44.1 9.4 106 39-148 279-389 (402)
253 KOG3098 Uncharacterized conser 96.9 0.058 1.3E-06 40.5 12.1 101 44-145 282-403 (461)
254 KOG1237 H+/oligopeptide sympor 96.7 0.032 6.9E-07 43.1 10.1 140 6-145 37-209 (571)
255 KOG1330 Sugar transporter/spin 96.6 0.025 5.4E-07 42.3 8.3 108 33-140 275-395 (493)
256 PF00854 PTR2: POT family; In 96.5 0.013 2.9E-07 42.5 6.8 76 72-147 2-89 (372)
257 KOG2563 Permease of the major 96.3 0.0027 5.9E-08 47.0 2.1 103 32-134 292-399 (480)
258 KOG3574 Acetyl-CoA transporter 96.1 0.092 2E-06 38.7 8.8 137 5-147 30-186 (510)
259 PF03092 BT1: BT1 family; Int 96.0 0.031 6.6E-07 41.7 6.6 110 38-147 252-371 (433)
260 PRK03612 spermidine synthase; 96.0 0.38 8.3E-06 36.9 12.4 111 34-146 43-161 (521)
261 PF02487 CLN3: CLN3 protein; 95.6 0.11 2.5E-06 38.3 8.0 99 44-147 62-160 (402)
262 PF06963 FPN1: Ferroportin1 (F 94.8 1.3 2.7E-05 33.4 12.6 74 7-80 3-77 (432)
263 PF03137 OATP: Organic Anion T 94.8 0.0081 1.7E-07 46.0 0.0 144 5-148 304-506 (539)
264 PF01770 Folate_carrier: Reduc 94.6 1.4 3E-05 32.9 12.4 96 43-138 287-384 (412)
265 TIGR00806 rfc RFC reduced fola 94.2 1.2 2.6E-05 34.1 10.1 96 43-138 300-397 (511)
266 PF03219 TLC: TLC ATP/ADP tran 93.8 1.9 4.1E-05 33.0 10.7 109 39-147 56-197 (491)
267 KOG4332 Predicted sugar transp 93.1 2.3 5.1E-05 30.3 10.2 96 43-138 284-388 (454)
268 TIGR00939 2a57 Equilibrative N 92.8 2.1 4.5E-05 32.3 9.5 56 92-147 370-425 (437)
269 KOG0637 Sucrose transporter an 91.1 1.2 2.7E-05 33.6 6.5 73 45-117 336-408 (498)
270 KOG3626 Organic anion transpor 91.0 1.3 2.7E-05 35.6 6.8 82 5-86 391-476 (735)
271 COG5336 Uncharacterized protei 88.6 3 6.4E-05 24.9 5.5 37 44-80 45-82 (116)
272 COG3202 ATP/ADP translocase [E 88.2 10 0.00022 29.2 10.7 109 39-147 59-201 (509)
273 KOG2325 Predicted transporter/ 87.6 0.29 6.3E-06 37.2 1.2 47 102-148 396-442 (488)
274 PF13000 Acatn: Acetyl-coenzym 86.2 3.6 7.9E-05 31.7 6.2 137 10-146 4-170 (544)
275 KOG3880 Predicted small molecu 86.1 1.9 4.2E-05 31.2 4.5 103 41-148 288-396 (409)
276 KOG3810 Micronutrient transpor 85.5 13 0.00028 27.6 8.5 94 44-137 274-369 (433)
277 KOG1479 Nucleoside transporter 83.9 3.2 6.9E-05 31.0 5.0 123 25-147 262-396 (406)
278 PF01733 Nucleoside_tran: Nucl 80.3 0.71 1.5E-05 32.9 0.6 103 46-148 187-302 (309)
279 PF11947 DUF3464: Protein of u 80.0 13 0.00028 23.8 6.2 49 93-144 96-144 (153)
280 KOG3097 Predicted membrane pro 79.2 5.7 0.00012 29.1 4.7 68 54-122 71-138 (390)
281 KOG1479 Nucleoside transporter 79.1 25 0.00054 26.4 9.9 63 5-68 17-79 (406)
282 TIGR00880 2_A_01_02 Multidrug 77.7 12 0.00026 22.1 8.1 33 44-76 90-122 (141)
283 KOG3574 Acetyl-CoA transporter 77.7 28 0.00062 26.4 9.7 120 20-143 279-418 (510)
284 PF02694 UPF0060: Uncharacteri 77.6 6.3 0.00014 23.5 3.9 49 39-87 52-100 (107)
285 PF13000 Acatn: Acetyl-coenzym 77.2 33 0.00071 26.8 14.3 45 100-144 411-455 (544)
286 COG4262 Predicted spermidine s 77.2 28 0.00061 26.0 8.4 86 36-121 38-132 (508)
287 PRK02237 hypothetical protein; 75.7 11 0.00024 22.5 4.5 47 41-87 56-102 (109)
288 KOG3810 Micronutrient transpor 74.8 2.8 6.2E-05 30.9 2.3 121 24-145 23-145 (433)
289 COG2233 UraA Xanthine/uracil p 66.1 58 0.0013 25.0 9.5 109 23-131 30-142 (451)
290 PF05631 DUF791: Protein of un 65.7 52 0.0011 24.3 7.8 62 5-68 244-305 (354)
291 PF11299 DUF3100: Protein of u 64.7 7.6 0.00016 26.7 2.5 45 98-143 175-219 (241)
292 TIGR00769 AAA ADP/ATP carrier 63.5 67 0.0014 24.8 10.2 50 34-83 292-345 (472)
293 KOG4830 Predicted sugar transp 63.2 11 0.00024 26.9 3.1 62 13-74 24-94 (412)
294 COG1268 BioY Uncharacterized c 62.5 43 0.00093 22.2 6.1 23 48-70 89-111 (184)
295 KOG1237 H+/oligopeptide sympor 61.8 15 0.00032 28.9 4.0 54 94-147 458-511 (571)
296 PF05232 BTP: Bacterial Transm 56.1 31 0.00068 18.6 3.8 46 26-71 19-64 (67)
297 KOG3880 Predicted small molecu 55.7 4.4 9.6E-05 29.5 0.3 74 43-116 64-137 (409)
298 PF07672 MFS_Mycoplasma: Mycop 55.2 73 0.0016 22.6 10.5 94 48-144 148-253 (267)
299 COG4769 Predicted membrane pro 53.5 23 0.00051 23.0 3.2 28 50-77 82-109 (181)
300 TIGR00939 2a57 Equilibrative N 48.8 1.2E+02 0.0026 23.1 6.9 47 94-145 106-152 (437)
301 PF00854 PTR2: POT family; In 47.0 1.1E+02 0.0024 22.3 6.6 96 44-139 254-369 (372)
302 TIGR02230 ATPase_gene1 F0F1-AT 45.9 63 0.0014 19.1 5.8 29 52-80 53-82 (100)
303 TIGR03173 pbuX xanthine permea 45.5 1.3E+02 0.0028 22.5 8.4 102 28-130 14-117 (406)
304 PF11298 DUF3099: Protein of u 44.1 56 0.0012 18.1 4.0 31 63-93 9-39 (73)
305 PLN02878 homogentisate phytylt 44.1 1.2E+02 0.0025 21.7 8.9 74 67-141 195-268 (280)
306 PF13493 DUF4118: Domain of un 43.9 35 0.00076 19.8 2.9 21 51-71 85-105 (105)
307 PF04117 Mpv17_PMP22: Mpv17 / 42.6 45 0.00098 17.8 3.0 32 110-141 29-60 (68)
308 KOG2601 Iron transporter [Inor 40.6 1.7E+02 0.0036 22.5 9.0 71 10-80 31-102 (503)
309 PF02632 BioY: BioY family; I 39.2 1E+02 0.0022 19.6 8.0 24 48-71 60-83 (148)
310 TIGR00801 ncs2 uracil-xanthine 37.7 1.8E+02 0.0038 22.0 9.8 40 28-68 24-64 (415)
311 PF03219 TLC: TLC ATP/ADP tran 35.2 2.2E+02 0.0047 22.2 8.6 37 44-80 322-358 (491)
312 KOG3097 Predicted membrane pro 34.7 95 0.002 23.1 4.2 71 39-109 308-382 (390)
313 PF10225 DUF2215: Uncharacteri 31.9 1.8E+02 0.0039 20.3 6.0 6 119-124 57-62 (249)
314 COG4890 Predicted outer membra 29.5 67 0.0014 14.8 1.9 25 105-129 9-33 (37)
315 COG1742 Uncharacterized conser 28.6 45 0.00097 19.9 1.5 45 39-83 53-97 (109)
316 TIGR00123 cbiM cobalamin biosy 27.7 2E+02 0.0044 19.5 9.1 27 99-125 184-210 (214)
317 PF06826 Asp-Al_Ex: Predicted 27.0 1.9E+02 0.004 18.9 8.7 86 42-130 57-144 (169)
318 PF12911 OppC_N: N-terminal TM 26.3 99 0.0021 15.5 3.3 24 63-86 7-30 (56)
319 PRK12887 ubiA tocopherol phyty 26.0 2.6E+02 0.0056 20.2 8.9 24 118-141 271-294 (308)
320 COG2076 EmrE Membrane transpor 25.9 1.6E+02 0.0034 17.7 7.8 66 56-121 15-81 (106)
321 PRK03612 spermidine synthase; 25.0 3.4E+02 0.0074 21.3 10.1 15 129-143 148-162 (521)
322 PF10785 NADH-u_ox-rdase: NADH 23.5 1.6E+02 0.0034 16.8 5.5 40 54-93 31-77 (86)
323 PF06939 DUF1286: Protein of u 23.4 91 0.002 18.9 2.2 18 54-71 32-49 (114)
324 PF13940 Ldr_toxin: Toxin Ldr, 22.4 1E+02 0.0022 14.2 2.9 19 49-67 16-34 (35)
325 COG3238 Uncharacterized protei 20.5 1.2E+02 0.0026 19.5 2.5 19 51-69 99-117 (150)
326 TIGR00926 2A1704 Peptide:H+ sy 20.3 3E+02 0.0064 22.4 5.1 17 43-59 282-298 (654)
No 1
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.91 E-value=2.8e-23 Score=151.15 Aligned_cols=147 Identities=16% Similarity=0.002 Sum_probs=137.5
Q ss_pred CccchHHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHH
Q 039580 2 KSETLTMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLW 81 (149)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~ 81 (149)
|.+++.....++.++....+....+...|.+.+|+|.+..+.++..+.+.+++++++++.|++.||+|||+++..+.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~ 83 (412)
T TIGR02332 4 KLFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLW 83 (412)
T ss_pred eehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHH
Confidence 44677788888888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 82 AAATFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
.++.....++++++.+++.|++.|++.+...+....++.|++|+++|++..++++....+|..++|.
T Consensus 84 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~ 150 (412)
T TIGR02332 84 GIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLI 150 (412)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999998888764
No 2
>PRK03545 putative arabinose transporter; Provisional
Probab=99.89 E-value=7.9e-22 Score=142.42 Aligned_cols=144 Identities=16% Similarity=0.134 Sum_probs=126.4
Q ss_pred chHHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHH
Q 039580 5 TLTMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAA 84 (149)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~ 84 (149)
+...+.+.+..+..........+..|.+.+++|.|+++.++..+.+.+++.+++++.|++.||+|||+++..+....+++
T Consensus 8 ~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 87 (390)
T PRK03545 8 WLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIAS 87 (390)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHH
Confidence 33344444544444444444556789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 85 TFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
.....+++|++.+++.|+++|++.+...+...+++.|++|+|+|++++++.+.+.++|..++|.
T Consensus 88 ~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~ 151 (390)
T PRK03545 88 HVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLP 151 (390)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999999998875
No 3
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.89 E-value=4.9e-22 Score=147.60 Aligned_cols=148 Identities=24% Similarity=0.240 Sum_probs=137.9
Q ss_pred CCccchHHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHH
Q 039580 1 MKSETLTMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFL 80 (149)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~ 80 (149)
|.+++..+..+++..+....+....+...|.+.+|+|.+.++.+|+.+.+.++.....++.|+++||+|||+++..+...
T Consensus 1 ~~~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~ 80 (495)
T PRK14995 1 MFRQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTL 80 (495)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 45667788888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhc-ccCchhhHHHHHHHHhhhhhhcccc
Q 039580 81 WAAATFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADST-DESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
..++.+.+.+++|++.+++.|.++|++.+...+.....+.+.+ |+++|++++++......+|..+||.
T Consensus 81 ~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~ 149 (495)
T PRK14995 81 FGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPL 149 (495)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998888887776 6899999999999999999998885
No 4
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.88 E-value=2.1e-22 Score=144.28 Aligned_cols=147 Identities=35% Similarity=0.488 Sum_probs=139.2
Q ss_pred CccchHHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHH
Q 039580 2 KSETLTMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLW 81 (149)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~ 81 (149)
+..++....+++.+.....+.+......+..++.+|+++++.|++.+.+.+.+.+.+|++|+++||++||+++.+|..+|
T Consensus 29 ~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW 108 (493)
T KOG1330|consen 29 KSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIW 108 (493)
T ss_pred ccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHH
Confidence 34556678888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 82 AAATFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
.++.+..++++.+|++.++|.+.|+|++.+.|..+++++|.+|+++|++.+++++....+|..+|..
T Consensus 109 ~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~v 175 (493)
T KOG1330|consen 109 TLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYV 175 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEE
Confidence 9999999999999999999999999999999999999999999999999999999999999888753
No 5
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.88 E-value=1.3e-21 Score=141.04 Aligned_cols=148 Identities=18% Similarity=0.147 Sum_probs=137.3
Q ss_pred CCccchHHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHH
Q 039580 1 MKSETLTMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFL 80 (149)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~ 80 (149)
|+++++.++.+....+.........++..|.+.+++|.|..+.+++.+.+.++..+++++.|+++||+|||+.+..+...
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~ 80 (381)
T PRK03633 1 MSTYTRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLI 80 (381)
T ss_pred CcHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 56667778888888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 81 WAAATFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
.+++.....++++++.+++.|+++|++.+...+...+.+.+..++++|++.++.++...++|..+||.
T Consensus 81 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 148 (381)
T PRK03633 81 FAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQL 148 (381)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888889999999999999999999999988888889999999999999999999999888875
No 6
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.88 E-value=1.5e-21 Score=140.69 Aligned_cols=146 Identities=16% Similarity=0.094 Sum_probs=136.0
Q ss_pred ccchHHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHH
Q 039580 3 SETLTMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWA 82 (149)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~ 82 (149)
++++.+....+.++....+....+...|.+.+++|.|+.+.+++.+.+.++..++.++.|+++||+|||+.+..+....+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~ 88 (405)
T TIGR00891 9 AQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFS 88 (405)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 45566777888888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 83 AATFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
++.+...+.++++.+++.|++.|++.+...+...+++.|++|+++|+++.++.+....+|..++|.
T Consensus 89 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 154 (405)
T TIGR00891 89 AGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQ 154 (405)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHH
Confidence 998888889999999999999999999999999999999999999999999999999999888764
No 7
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.87 E-value=5.7e-22 Score=146.30 Aligned_cols=142 Identities=16% Similarity=0.115 Sum_probs=126.8
Q ss_pred HHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHH
Q 039580 7 TMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATF 86 (149)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 86 (149)
.+....+.+.....++...+...|.+.+|+|.+..+.+++.+.+.+++.+++++.|+++||+|+|+++..+.+.+++...
T Consensus 30 i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~ 109 (467)
T PRK09556 30 SYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICML 109 (467)
T ss_pred HHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHH
Confidence 45566667777777888899999999999999999999999999999999999999999999999999888888777665
Q ss_pred HHHH-----hhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 87 LVAI-----STTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 87 ~~~~-----~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
..+. +++++.+++.|+++|++++...|...+++.|++|+++|++++|+.+...++|.++++.
T Consensus 110 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~ 176 (467)
T PRK09556 110 GFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGG 176 (467)
T ss_pred HHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHH
Confidence 5544 5899999999999999999999999999999999999999999999988898888764
No 8
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.86 E-value=5.8e-21 Score=139.16 Aligned_cols=144 Identities=15% Similarity=0.082 Sum_probs=131.9
Q ss_pred chHHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHH
Q 039580 5 TLTMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAA 84 (149)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~ 84 (149)
++......+..+....+.....+..|.+.+++|.|+.+.++..+.+.++..+++++.|+++||+|||+++..+....+++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~ 96 (426)
T PRK12307 17 KNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVG 96 (426)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 44556666777777788877888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 85 TFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
.....++++++.+++.|++.|++.+..++....++.|++|+|+|+++.++...+..+|..++|.
T Consensus 97 ~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~ 160 (426)
T PRK12307 97 TGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAY 160 (426)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHH
Confidence 9989999999999999999999999999999999999999999999999999999999888764
No 9
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.86 E-value=1.4e-20 Score=136.25 Aligned_cols=138 Identities=14% Similarity=0.044 Sum_probs=121.9
Q ss_pred HHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHH
Q 039580 11 VNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAI 90 (149)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~ 90 (149)
.....+......+......|.+.+++|.++++.++..+.+.++..+++++.|++.||+|||+++..+..+.+++.+...+
T Consensus 25 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~ 104 (394)
T PRK10213 25 VAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSF 104 (394)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHH
Confidence 33333333334444455678899999999999999999999999999999999999999999999999999999888888
Q ss_pred hhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 91 STTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 91 ~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
+++++.+++.|+++|++.+...+...+++.|++|+|+|+++.+......++|..+||.
T Consensus 105 ~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~ 162 (394)
T PRK10213 105 ANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAP 162 (394)
T ss_pred HChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999989998888775
No 10
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.86 E-value=3.4e-20 Score=132.27 Aligned_cols=144 Identities=18% Similarity=0.208 Sum_probs=135.5
Q ss_pred chHHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHH
Q 039580 5 TLTMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAA 84 (149)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~ 84 (149)
+...+.+.++.|.......+....+|++.+|+|.|..+.|+..+.|.++.+++.|+...+.||++||+++...+.++.++
T Consensus 12 ~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~ 91 (394)
T COG2814 12 WLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVS 91 (394)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHH
Confidence 44566677778888888888899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 85 TFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
.+...+++|++.+.+.|++.|+..|..++...+...+..||++|+++.++..++..++.++|..
T Consensus 92 n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvP 155 (394)
T COG2814 92 NLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVP 155 (394)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999999999999999998887754
No 11
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.86 E-value=1.6e-20 Score=134.82 Aligned_cols=146 Identities=17% Similarity=0.148 Sum_probs=130.1
Q ss_pred ccchHHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHH
Q 039580 3 SETLTMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWA 82 (149)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~ 82 (149)
++++.........+..........+..|.+.+++|.|+++.+++.+.+.++..+++++.|+++||+|||+.+..+....+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~ 81 (385)
T TIGR00710 2 SAKAFALLLGCLSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFA 81 (385)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHH
Confidence 34444455555556666677777888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 83 AATFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
++.......++++.+.+.|++.|++.+...+..++++.|++|+++|++..+..+....+|..++|.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 147 (385)
T TIGR00710 82 LSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPL 147 (385)
T ss_pred HHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998888889999999999999999999999999999999999999999999999999998888764
No 12
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.85 E-value=3.2e-20 Score=134.36 Aligned_cols=125 Identities=14% Similarity=0.147 Sum_probs=115.7
Q ss_pred cccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Q 039580 23 SLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSRG 102 (149)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (149)
...++..|.+.+|+|.|.++.++..+.+.+++.+++++.|++.||+|||+++..+..+++++.+...++++++.+++.|+
T Consensus 26 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~ 105 (393)
T PRK09705 26 TSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSAL 105 (393)
T ss_pred hccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHH
Confidence 56778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 103 LNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 103 ~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
++|++.+...+..+.++.|++| ++|+++++.+..+...|..+|+.
T Consensus 106 l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~ 150 (393)
T PRK09705 106 LGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAA 150 (393)
T ss_pred HHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999986 88999999988777666666553
No 13
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.85 E-value=2.5e-20 Score=137.68 Aligned_cols=143 Identities=13% Similarity=0.192 Sum_probs=133.3
Q ss_pred HHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHH
Q 039580 7 TMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATF 86 (149)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 86 (149)
.+..+.+..+....+....++..|.+.+++|.++++.+++.+.+.++..++.++.|+++||+|||+.+..+.....++..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 82 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSL 82 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 45566677888888888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccccC
Q 039580 87 LVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGLC 149 (149)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~~ 149 (149)
....+++++.+++.|+++|++.+...+..++++.|++|+++|+++.+++.....+|..+||.+
T Consensus 83 ~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 145 (485)
T TIGR00711 83 LCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTL 145 (485)
T ss_pred HHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhcc
Confidence 999999999999999999999999999999999999999999999999999999999888753
No 14
>PRK03699 putative transporter; Provisional
Probab=99.85 E-value=2.5e-20 Score=134.86 Aligned_cols=147 Identities=12% Similarity=-0.008 Sum_probs=132.3
Q ss_pred CccchHHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHH
Q 039580 2 KSETLTMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLW 81 (149)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~ 81 (149)
.+|++..+...+..+.........+...|.+.+++|.|+++.+++.+.+.+++.+++++.|++.||+|||+++..+....
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~ 82 (394)
T PRK03699 3 SNRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALM 82 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 35666777777788888888888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 82 AAATFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
+++.....++++++.+++.|+++|++.+...+.....+.|.+|+++|++..+..+....+|..++|.
T Consensus 83 ~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 149 (394)
T PRK03699 83 ILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPI 149 (394)
T ss_pred HHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHH
Confidence 9998888889999999999999999999999989999999999999999999887777777776653
No 15
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.85 E-value=2.1e-20 Score=135.49 Aligned_cols=144 Identities=18% Similarity=0.166 Sum_probs=130.8
Q ss_pred chHHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHH
Q 039580 5 TLTMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAA 84 (149)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~ 84 (149)
+..........+....+....+...|.+.+++|.++++.+++.+.+.++..+++++.|+++||+|||+++..+..+..++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 93 (406)
T PRK11551 14 ALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLF 93 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHH
Confidence 44555566677778888888888899999999999999999999999999999999999999999999999999888888
Q ss_pred HHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 85 TFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
.+...+.++++.+.+.|++.|++.+...+...+++.|++|+|+|++.+++.+....+|..++|.
T Consensus 94 ~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 157 (406)
T PRK11551 94 SLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASV 157 (406)
T ss_pred HHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888999999999999999999999999999999999999999999999999888887764
No 16
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.85 E-value=5.1e-20 Score=132.79 Aligned_cols=142 Identities=13% Similarity=0.123 Sum_probs=128.7
Q ss_pred HHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHH
Q 039580 7 TMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATF 86 (149)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 86 (149)
.+....+..+..........+..|.+.+|+|.+.++.++..+.+.++..+++++.|+++||+|||+++..+....+++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 83 (382)
T PRK10091 4 VILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNA 83 (382)
T ss_pred hHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHH
Confidence 34455566666777777778888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 87 LVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
...++++++.+++.|++.|++.+...+.....+.|++|+++|++.++....+..+|..++|.
T Consensus 84 l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 145 (382)
T PRK10091 84 MFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIP 145 (382)
T ss_pred HHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999988888899999999999999999999888898888775
No 17
>PRK10504 putative transporter; Provisional
Probab=99.84 E-value=4.9e-20 Score=135.96 Aligned_cols=144 Identities=16% Similarity=0.265 Sum_probs=131.1
Q ss_pred chHHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHH
Q 039580 5 TLTMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAA 84 (149)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~ 84 (149)
++..+.+.+..+....+....++..|.+.+++|.++.+.+++.+.+.++..++.++.|+++||+|||+++..+....+++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~ 88 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLG 88 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 34556777778888888888888999999999999999999999999999999999999999999999999998888888
Q ss_pred HHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 85 TFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
.+...++++++.+++.|+++|++.+...+...+.+.|.+|+++|++..++.+...++|..+||.
T Consensus 89 ~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 152 (471)
T PRK10504 89 SLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPA 152 (471)
T ss_pred HHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 8888888999999999999999999999999999999999999999999999999999988875
No 18
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.84 E-value=4.1e-20 Score=135.37 Aligned_cols=143 Identities=15% Similarity=0.102 Sum_probs=129.8
Q ss_pred hHHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHH
Q 039580 6 LTMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAAT 85 (149)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~ 85 (149)
+......+..+....+....+...|.+.+++|.|+.+.+++.+.+.++..+++++.|++.||+|||+++..+....+++.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~ 102 (434)
T PRK11663 23 HILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIIN 102 (434)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHH
Confidence 34445566667677777777888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 86 FLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
+...++++++.+.+.|++.|++.+..++....++.|++|+++|++.+++.+...++|..++|.
T Consensus 103 ~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~ 165 (434)
T PRK11663 103 ILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPL 165 (434)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988899999999999999999999889999999999999999999999999999999988874
No 19
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.84 E-value=4.2e-20 Score=141.86 Aligned_cols=142 Identities=16% Similarity=0.160 Sum_probs=128.0
Q ss_pred hHHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHH
Q 039580 6 LTMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAAT 85 (149)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~ 85 (149)
..+....+..+....+....+...|.+.++++.+..+.+++.+.+.++.+++.+++|+++||+|||+.++++.++.+++.
T Consensus 167 ~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ 246 (742)
T TIGR01299 167 ALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFA 246 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 34445555666666677777888999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccc
Q 039580 86 FLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp 147 (149)
++..++++++.+++.|++.|++.+...+...+++.|++|+++|++..++....+.+|.++++
T Consensus 247 ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~ 308 (742)
T TIGR01299 247 FFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAA 308 (742)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88889999999999999999999999999999999999999999999999998888887765
No 20
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.84 E-value=4.5e-20 Score=135.05 Aligned_cols=141 Identities=10% Similarity=0.043 Sum_probs=115.9
Q ss_pred HHHHHHHHHHHHHhhhcccccchHHHHhhcC---CCcchhhHHHHH---HHHHHHhhhhhHhHhhhhccchHHHHHHHHH
Q 039580 7 TMVLVNLAGIMERADESLLPGVYKEVGAALC---TDPTGLGSLTLF---RSIVQSSCYPLAAYLSVHHNCAHIIALGAFL 80 (149)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~ 80 (149)
.+....+..+++..|....+...|.+.+|++ .+..+.+..... ..++..+++++.|+++||+|||+.+..+...
T Consensus 23 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~ 102 (432)
T PRK10406 23 AIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCM 102 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 3445556788889999998889999999985 344444444443 4445559999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhH--------HHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccc
Q 039580 81 WAAATFLVAISTTFF--------QVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 81 ~~~~~~~~~~~~~~~--------~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp 147 (149)
++++.+...+++++. .+++.|+++|++.|..++...+++.|++|+++|++..+..+.+...|..+++
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~ 177 (432)
T PRK10406 103 MCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLAL 177 (432)
T ss_pred HHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHH
Confidence 999999888877653 5889999999999999999999999999999999999988777777766554
No 21
>PRK12382 putative transporter; Provisional
Probab=99.84 E-value=1e-19 Score=131.41 Aligned_cols=144 Identities=13% Similarity=0.061 Sum_probs=119.0
Q ss_pred chHHHHHHHHHHHHHhhhcccccchHH-HHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHH
Q 039580 5 TLTMVLVNLAGIMERADESLLPGVYKE-VGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAA 83 (149)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~ 83 (149)
++.+....+..+.......+..+..|. +.+|+|.|+++.++..+.+.++..+.+++.|+++||+||||.+..+.....+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~ 93 (392)
T PRK12382 14 NFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGL 93 (392)
T ss_pred cccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHH
Confidence 344555555666666666666666665 5789999999999999999999999999999999999999999988877666
Q ss_pred HHHHHH--------HhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 84 ATFLVA--------ISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 84 ~~~~~~--------~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
+.+... ..++++.+++.|+++|++.+...+...+++.|..|+|+|+++++..+...+.|..+||.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~ 166 (392)
T PRK12382 94 AGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAP 166 (392)
T ss_pred HHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHH
Confidence 543221 13578889999999999999999999999999999999999999998888888877764
No 22
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.84 E-value=8.9e-20 Score=129.25 Aligned_cols=137 Identities=28% Similarity=0.382 Sum_probs=122.1
Q ss_pred HHHHHHHHhhhcccccchH-HHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHH
Q 039580 12 NLAGIMERADESLLPGVYK-EVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAI 90 (149)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~ 90 (149)
++..+..........+..| .+.+++|.|+++.+++.+.+.++..+++++.|+++||+|||+++..+..+.+++.....+
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~ 81 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAF 81 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhh
Confidence 3456666677777777788 888999999999999999999999999999999999999999999999999998655556
Q ss_pred hhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 91 STTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 91 ~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
+++.+.+++.|++.|++.+...+...+++.|++|+|+|++.++..+....+|..++|.
T Consensus 82 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 139 (352)
T PF07690_consen 82 ASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPL 139 (352)
T ss_dssp HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccc
Confidence 6788899999999999999999999999999999999999999999999999988874
No 23
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.83 E-value=8.8e-20 Score=135.29 Aligned_cols=145 Identities=16% Similarity=0.125 Sum_probs=133.5
Q ss_pred cchHHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHH
Q 039580 4 ETLTMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAA 83 (149)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~ 83 (149)
+++.+..+.+..+....+........|.+.+++|.|+.+.++..+.+.++..++.++.|+++||+|||+.+..+....++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 97 (496)
T PRK03893 18 QWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSV 97 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 34566677788888888888888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 84 ATFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
+.+...+.++++.+.+.|++.|++.+..++....++.|.+|+++|++..+......++|..++|.
T Consensus 98 ~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 162 (496)
T PRK03893 98 GTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQ 162 (496)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888899999999999999999999999999999999999999999999999999999888874
No 24
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.83 E-value=1.5e-19 Score=131.49 Aligned_cols=127 Identities=9% Similarity=0.031 Sum_probs=121.0
Q ss_pred hhcccccchHHHHhhcCCCcch-hhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q 039580 21 DESLLPGVYKEVGAALCTDPTG-LGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAV 99 (149)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (149)
.+...+...|++.+|+|++++| .+.+.+.+..++++..++.|+++||+|.|+++..+.+.+++...+..++++...+.+
T Consensus 41 ~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i 120 (511)
T TIGR00806 41 FRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQL 120 (511)
T ss_pred hhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566778899999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 100 SRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 100 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
.|++.|++++... +...++.+++|+++|+++.+..+.+..+|.+++++
T Consensus 121 ~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~ 168 (511)
T TIGR00806 121 MEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSV 168 (511)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999 99999999999999999999999999999998875
No 25
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.83 E-value=1.6e-19 Score=134.08 Aligned_cols=143 Identities=14% Similarity=0.200 Sum_probs=122.4
Q ss_pred chHHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcch-hhHH-----HHHHHHHHHhhhhhHhHhhhhccchHHHHHHH
Q 039580 5 TLTMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTG-LGSL-----TLFRSIVQSSCYPLAAYLSVHHNCAHIIALGA 78 (149)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~ 78 (149)
++......++++++.+|....+...|.+.++++.+.++ ..++ .+...++..+++++.|+++||+|||+++..+.
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 34556667889999999999999999999998754432 1222 46677889999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhHH--------HHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccc
Q 039580 79 FLWAAATFLVAISTTFFQ--------VAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp 147 (149)
.+++++.+..++++++.. +++.|+++|++.+..++...+++.|++|+|+|++..++...+..+|..+|+
T Consensus 95 ~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~ 171 (490)
T PRK10642 95 VIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGA 171 (490)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 999999999999998864 789999999999999999999999999999999999998887777776654
No 26
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.83 E-value=1.1e-19 Score=131.43 Aligned_cols=146 Identities=15% Similarity=0.110 Sum_probs=123.5
Q ss_pred ccchHHHHHHHHHHHHHhhhcccccchHH-HHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHH
Q 039580 3 SETLTMVLVNLAGIMERADESLLPGVYKE-VGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLW 81 (149)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~ 81 (149)
++++.+..+.+..+....+..+..+..|. +.+++|.|+.+.+++.+.+.++..+.+++.|+++||+||||++..+....
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~ 91 (399)
T PRK05122 12 RLTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGC 91 (399)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHH
Confidence 34566667777888888887777777776 56889999999999999999999999999999999999999999998887
Q ss_pred HHHHHHHHHh--------hhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 82 AAATFLVAIS--------TTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 82 ~~~~~~~~~~--------~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
+++.....++ .+++.+++.|+++|++.+...+....+..|+.|+|+|+++.++.+.....|..+||.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 166 (399)
T PRK05122 92 ALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAP 166 (399)
T ss_pred HHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHH
Confidence 7765544332 246678899999999999999999999999999999999999988888887777664
No 27
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.83 E-value=1.2e-19 Score=131.41 Aligned_cols=137 Identities=13% Similarity=0.100 Sum_probs=117.4
Q ss_pred HHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHH
Q 039580 9 VLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLV 88 (149)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~ 88 (149)
..+..+.++............+.+.+++|.++.+.+++.+.+.+.+.+..|+.|+++||+||||++.++....+++.+.+
T Consensus 6 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~ 85 (393)
T PRK11195 6 YAIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLM 85 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHH
Confidence 34455666666654445555566678999999999999999999999999999999999999999999999988877766
Q ss_pred HHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 89 AISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 89 ~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
.+.++. ++.|+++|++.+...|...+++.|++|+|+|++++++.+....+|..+||.
T Consensus 86 ~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~ 142 (393)
T PRK11195 86 LFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTV 142 (393)
T ss_pred HHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 665554 678999999999999999999999999999999999999999988888875
No 28
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.83 E-value=1.1e-19 Score=129.61 Aligned_cols=141 Identities=16% Similarity=0.117 Sum_probs=120.9
Q ss_pred chHHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHH
Q 039580 5 TLTMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAA 84 (149)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~ 84 (149)
+..........+... ..+..+...|.+.+++|.|.++.+++.+.+.++..+++++.|+++||+|||+++..+..+.+++
T Consensus 3 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~ 81 (377)
T TIGR00890 3 WYVLVGTVIMCFTSG-YVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLG 81 (377)
T ss_pred EEEeHHHHHHHHHhh-HHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHH
Confidence 333333333333333 3556788899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccc
Q 039580 85 TFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp 147 (149)
.+...++++++.+++.|.+.|++.+..++.......|++| |+|+++.++...+.++|..+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~ 143 (377)
T TIGR00890 82 FTFYAIADSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILS 143 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHH
Confidence 9999999999999999999999999888888888888885 6899999999998888876543
No 29
>PRK10133 L-fucose transporter; Provisional
Probab=99.82 E-value=2.8e-19 Score=131.17 Aligned_cols=142 Identities=18% Similarity=0.073 Sum_probs=125.2
Q ss_pred HHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHH
Q 039580 7 TMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATF 86 (149)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 86 (149)
.+..+.+..+.............|.+++++|.|+.+.++..+.+.+++.+++++.|++.||+|||+++..+..+++++.+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~ 106 (438)
T PRK10133 27 PFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAA 106 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 44555566666677777788889999999999999999999999999999999999999999999999999999999887
Q ss_pred HH---HHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 87 LV---AISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 87 ~~---~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
.. ..+++++.+++.|+++|++.+...+..+.++.|..|+++|.+.++..+..+.+|..+||.
T Consensus 107 l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~ 171 (438)
T PRK10133 107 LFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVV 171 (438)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHH
Confidence 64 467899999999999999999999999999999877777777888888888888888764
No 30
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.82 E-value=1.7e-20 Score=133.39 Aligned_cols=146 Identities=18% Similarity=0.074 Sum_probs=139.2
Q ss_pred ccchHHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHH
Q 039580 3 SETLTMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWA 82 (149)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~ 82 (149)
.|++.+....+++....+.+..++...|.+.++.++|.+|.|.+.+.+.+.+.++..+.|.++||.++|+.+..++++.+
T Consensus 26 ~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsa 105 (448)
T COG2271 26 WRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSA 105 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHH
Confidence 34567788888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 83 AATFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
+..+++.++++.+.+.++..+.|.++|..+|.....+..++++++||+..+++++..++|..+.|.
T Consensus 106 i~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~ 171 (448)
T COG2271 106 IVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPL 171 (448)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHH
Confidence 999999999999999999999999999999999999999999999999999999999999988764
No 31
>PRK15075 citrate-proton symporter; Provisional
Probab=99.82 E-value=2e-19 Score=131.68 Aligned_cols=145 Identities=13% Similarity=0.153 Sum_probs=121.2
Q ss_pred ccchHHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHH-HHH-----HHHHHhhhhhHhHhhhhccchHHHHH
Q 039580 3 SETLTMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLT-LFR-----SIVQSSCYPLAAYLSVHHNCAHIIAL 76 (149)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~g~l~dr~g~~~~~~~ 76 (149)
.|++......+..+....|....+...|.+.+|++.++.+.+... +.. .+...+++++.|+++||+|||+.+..
T Consensus 12 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~ 91 (434)
T PRK15075 12 SKARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIV 91 (434)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHH
Confidence 456667788889999999999999999999999998877654432 222 22234678999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhH--------HHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccc
Q 039580 77 GAFLWAAATFLVAISTTFF--------QVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp 147 (149)
+...+.++.....++++++ .+++.|+++|++.+...+....++.|++|+|+|++..++.+...++|..+++
T Consensus 92 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~ 170 (434)
T PRK15075 92 TLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAA 170 (434)
T ss_pred HHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988876 3688999999999999998999999999999999999998877766665544
No 32
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.82 E-value=2.6e-19 Score=132.19 Aligned_cols=141 Identities=16% Similarity=0.204 Sum_probs=119.9
Q ss_pred HHHHHHHHHHHHHhhhcccccchHHHHhhc--------CCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHH
Q 039580 7 TMVLVNLAGIMERADESLLPGVYKEVGAAL--------CTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGA 78 (149)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~ 78 (149)
..+...+..+....+....+...|.+.+++ +.++.+.+++.+.+.++..+++++.|+++||+|||+++..+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~ 92 (479)
T PRK10077 13 ITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAA 92 (479)
T ss_pred HHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 344555566667777777777778887776 778899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHh------------hhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcc
Q 039580 79 FLWAAATFLVAIS------------TTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIG 146 (149)
Q Consensus 79 ~~~~~~~~~~~~~------------~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig 146 (149)
.+.+++.+...+. +.++.+++.|+++|++.+...+...+++.|++|+++|+++++..+....+|..++
T Consensus 93 ~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~ 172 (479)
T PRK10077 93 VLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVV 172 (479)
T ss_pred HHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHH
Confidence 9888877666542 2356678999999999999999999999999999999999999998888888765
Q ss_pred c
Q 039580 147 G 147 (149)
Q Consensus 147 p 147 (149)
+
T Consensus 173 ~ 173 (479)
T PRK10077 173 Y 173 (479)
T ss_pred H
Confidence 4
No 33
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.82 E-value=2.8e-19 Score=127.72 Aligned_cols=138 Identities=12% Similarity=0.087 Sum_probs=120.3
Q ss_pred HHHHHHHHHHHhhhcccccchHH-HHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHH
Q 039580 9 VLVNLAGIMERADESLLPGVYKE-VGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFL 87 (149)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~ 87 (149)
+..++..+..........+..|. +.+++|.|+.+.+++.+.+.++++++.++.|+++||+|||+.+..+.....++.+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~ 83 (366)
T TIGR00886 4 FFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLW 83 (366)
T ss_pred HHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 34556667777777788888885 88999999999999999999999999999999999999999999999999999988
Q ss_pred HHHhh-hhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccc
Q 039580 88 VAIST-TFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 88 ~~~~~-~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp 147 (149)
..+.+ +++.+.+.|+++|++.+. .+....++.|++|+++|++..++.....++|..+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 143 (366)
T TIGR00886 84 AGLAVQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQ 143 (366)
T ss_pred HHHHhhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHH
Confidence 88888 999999999999998664 456788999999999999999998866666665554
No 34
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.82 E-value=7.9e-20 Score=130.85 Aligned_cols=133 Identities=20% Similarity=0.143 Sum_probs=123.8
Q ss_pred HHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhH
Q 039580 16 IMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFF 95 (149)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (149)
.....+....+...|.+.+++|.++.+.+++.+.+.++..++.++.|+++||+|||+.+..+....+++.....++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 83 (399)
T TIGR00893 4 VINYLDRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYV 83 (399)
T ss_pred hHHHHHHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHH
Confidence 45566777778888999999999999999999999999999999999999999999999999999999988888999999
Q ss_pred HHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 96 QVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 96 ~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
.+.+.|++.|++.+...+..+.++.|++|+|+|++..+..+...++|..++|.
T Consensus 84 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 136 (399)
T TIGR00893 84 SLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGP 136 (399)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888864
No 35
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.82 E-value=2.1e-19 Score=127.77 Aligned_cols=137 Identities=17% Similarity=0.090 Sum_probs=123.1
Q ss_pred HHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHh
Q 039580 12 NLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAIS 91 (149)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~ 91 (149)
....+.............|.+.++++.++.+.+++.+.+.++..+..++.|+++||+|||+.+..+..+..++.....+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 84 (365)
T TIGR00900 5 FAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFV 84 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHH
Confidence 34556666666667777888988999999999999999999999999999999999999999999988888877777776
Q ss_pred h-----hhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 92 T-----TFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 92 ~-----~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
+ +++.+++.|++.|++.+...+..++++.|++|+++|++..+..+....+|..+||.
T Consensus 85 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 146 (365)
T TIGR00900 85 ALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPG 146 (365)
T ss_pred HHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 6 89999999999999999999999999999999999999999999999999988875
No 36
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.82 E-value=6.2e-19 Score=128.47 Aligned_cols=134 Identities=13% Similarity=0.064 Sum_probs=120.6
Q ss_pred HHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhh
Q 039580 15 GIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTF 94 (149)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (149)
.+..........+..|.+.++++.+..+.++..+.+.+++++++++.|+++||+|||+++..+...++++.+...+++++
T Consensus 25 ~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~ 104 (413)
T PRK15403 25 DFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSM 104 (413)
T ss_pred HHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCH
Confidence 44444556677788899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 95 FQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 95 ~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
+.+++.|+++|++.+...+.....+.|.+|+++|++.++..+....+|..+||.
T Consensus 105 ~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 158 (413)
T PRK15403 105 TQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPL 158 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988777777888999999999999999999888888888775
No 37
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.81 E-value=2.4e-19 Score=128.84 Aligned_cols=126 Identities=14% Similarity=0.037 Sum_probs=105.4
Q ss_pred hcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Q 039580 22 ESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSR 101 (149)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (149)
....++..|.+.+|+|.|+.+.+++.+.+.+++.+++++.|+++||+|||+++.........+.......++++.+++.|
T Consensus 7 ~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R 86 (368)
T TIGR00903 7 WVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQ 86 (368)
T ss_pred HHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 34567789999999999999999999999999999999999999999998876655444444433233337899999999
Q ss_pred HhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 102 GLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 102 ~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
+++|++++. .+......+|++|+|+|++++++.+.+..+|..++|.
T Consensus 87 ~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~ 132 (368)
T TIGR00903 87 LLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALA 132 (368)
T ss_pred HHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999986 4555666799999999999999999999999988875
No 38
>TIGR00895 2A0115 benzoate transport.
Probab=99.81 E-value=2e-19 Score=129.21 Aligned_cols=143 Identities=22% Similarity=0.253 Sum_probs=127.0
Q ss_pred hHHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHH
Q 039580 6 LTMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAAT 85 (149)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~ 85 (149)
+.........+....+........|.+.+++|.++.+.+++.+...++..++.++.|+++||+|||+.+..+.....++.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~ 96 (398)
T TIGR00895 17 RAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFT 96 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 34444445556666666677788999999999999999999999999999999999999999999999999999988888
Q ss_pred HHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 86 FLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
....+.++++.+.+.+++.|++.+...+...+++.|++|+++|++..++.+....+|..++|.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 159 (398)
T TIGR00895 97 LLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGF 159 (398)
T ss_pred HHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHH
Confidence 888888999999999999999999999999999999999999999999999999998888764
No 39
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.81 E-value=8.2e-19 Score=127.76 Aligned_cols=142 Identities=18% Similarity=0.065 Sum_probs=127.2
Q ss_pred HHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHH
Q 039580 7 TMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATF 86 (149)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 86 (149)
.+..++...+..........+..|.+++++|.|+.+.+++.+.+.+++.+++++.|++.||+|||+.+..+..+++++..
T Consensus 4 ~~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~ 83 (410)
T TIGR00885 4 PFALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAF 83 (410)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 34556666777777777788999999999999999999999999999999999999999999999999999999999887
Q ss_pred HHHH---hhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 87 LVAI---STTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 87 ~~~~---~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
.... .++++.+++.|++.|++.+..++..+.++.+..|+++|++..++.+...++|..+||.
T Consensus 84 l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~ 148 (410)
T TIGR00885 84 LFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMV 148 (410)
T ss_pred HHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 6533 4578999999999999999999999999999999999999999999999999988875
No 40
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.81 E-value=9.5e-19 Score=126.49 Aligned_cols=144 Identities=10% Similarity=0.116 Sum_probs=125.6
Q ss_pred chHHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHH
Q 039580 5 TLTMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAA 84 (149)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~ 84 (149)
++....................+..|.+.+++|.|+.+.+++.+.+.++..++.++.|+++||+|||+.+..+.....++
T Consensus 7 ~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~ 86 (394)
T PRK11652 7 VNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILG 86 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHH
Confidence 44455555555555666666777889999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 85 TFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
.......++++.+++.|++.|++.+...+....+..|.+++++|++..+..+.+..++..++|.
T Consensus 87 ~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 150 (394)
T PRK11652 87 TLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPL 150 (394)
T ss_pred HHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888999999999999999998888888889999999999999999988888888777764
No 41
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.81 E-value=9.5e-19 Score=126.99 Aligned_cols=138 Identities=12% Similarity=0.070 Sum_probs=120.0
Q ss_pred HHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHH
Q 039580 11 VNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAI 90 (149)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~ 90 (149)
+.+..+..........+..|.+.+++|.|+.+.++..+.+.+++.++.++.|+++||+||||++..+....+++......
T Consensus 18 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~ 97 (406)
T PRK15402 18 LVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILL 97 (406)
T ss_pred HHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH
Confidence 33444444456666677788899999999999999999999999999999999999999999999999999988888888
Q ss_pred hhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 91 STTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 91 ~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
+++++.+++.|+++|++.+...+...+.+.|.+|+++|.+..+.......++..+||.
T Consensus 98 ~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 155 (406)
T PRK15402 98 AQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPL 155 (406)
T ss_pred HccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999888889999999999999999999887777777776664
No 42
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.80 E-value=1.4e-18 Score=127.27 Aligned_cols=140 Identities=13% Similarity=0.037 Sum_probs=122.7
Q ss_pred hHHHHHHHHHHHHHhhhcccccchHHHHh-hcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHH
Q 039580 6 LTMVLVNLAGIMERADESLLPGVYKEVGA-ALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAA 84 (149)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~ 84 (149)
+.+....+............++..+.+.+ ++|+|.+|.++..+...+++.+..++.|++.||+|+|+++..+..++.+.
T Consensus 34 r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~ 113 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIP 113 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 56666777777777777888888888865 89999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHh-----hhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcc
Q 039580 85 TFLVAIS-----TTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIG 146 (149)
Q Consensus 85 ~~~~~~~-----~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig 146 (149)
.....++ ++++.+++.|++.|++ +..++.....+++++|+++||++.|+.....++|..++
T Consensus 114 ~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~ 179 (462)
T PRK15034 114 CVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVM 179 (462)
T ss_pred HHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHH
Confidence 8888876 7999999999999998 66888999999999999999999999965566665543
No 43
>PRK10054 putative transporter; Provisional
Probab=99.80 E-value=1.9e-18 Score=125.23 Aligned_cols=144 Identities=8% Similarity=0.024 Sum_probs=124.3
Q ss_pred chHHHHHHHHHHHHHhhhcccccc-hHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHH
Q 039580 5 TLTMVLVNLAGIMERADESLLPGV-YKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAA 83 (149)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~ 83 (149)
++....+.+..++.........++ .+++.+++|.|..+.++..+.+.++..+.+++.|+++||+|||+++..+.....+
T Consensus 6 ~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~ 85 (395)
T PRK10054 6 RRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFAS 85 (395)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHH
Confidence 344556666677777776665555 4556788999999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 84 ATFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
+.....+.++++.+++.+.+.|.+.+...+....+..|..|+++|++..++.+...++|..+||.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~ 150 (395)
T PRK10054 86 GFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPP 150 (395)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888889999888888988888888888889999999999999999999999999999988875
No 44
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.80 E-value=8.6e-19 Score=123.82 Aligned_cols=139 Identities=24% Similarity=0.321 Sum_probs=128.2
Q ss_pred HHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHH
Q 039580 10 LVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVA 89 (149)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~ 89 (149)
......+....+.....+..|.+.+++|.++++.++..+...++..++.++.|+++||+|||+.+..+.....++.....
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~ 82 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLA 82 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHH
Confidence 34456667777778888889999999999999999999999999999999999999999999999999999999998888
Q ss_pred HhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 90 ISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 90 ~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
..++++.+.+.|.+.|++.+...+...++..|++|+|+|++..+..+....+|..++|.
T Consensus 83 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 141 (352)
T cd06174 83 FASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPL 141 (352)
T ss_pred HhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999988875
No 45
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.80 E-value=1.8e-18 Score=128.13 Aligned_cols=141 Identities=13% Similarity=-0.008 Sum_probs=117.4
Q ss_pred hHHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHH
Q 039580 6 LTMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAAT 85 (149)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~ 85 (149)
+.+.......+..........+..|.+.+++|.+..+.+++.+.+.+++.+++++.|+++||+|||+++..+.+.++++.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~ 115 (476)
T PLN00028 36 RAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAV 115 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHH
Confidence 34444444455555555566777889999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccc
Q 039580 86 FLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp 147 (149)
+...++++++.+++.|++.|++.+... ....++.|++|+++|+++.++.+...++|..+++
T Consensus 116 ~~~~~~~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~ 176 (476)
T PLN00028 116 FCMSLVSSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQ 176 (476)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHH
Confidence 888889999999999999999887654 4566789999999999999998776666666554
No 46
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.80 E-value=1.7e-18 Score=125.17 Aligned_cols=139 Identities=14% Similarity=0.101 Sum_probs=122.3
Q ss_pred HHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHH
Q 039580 10 LVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVA 89 (149)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~ 89 (149)
......+..........+..|.+.+++|.|+.+.++..+.+.++..+++++.|+++||+|||+.+..+.....++.....
T Consensus 7 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~ 86 (392)
T PRK10473 7 CSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCS 86 (392)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHH
Confidence 33444444555555556779999999999999999999999999999999999999999999999999999999888888
Q ss_pred HhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 90 ISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 90 ~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
.+++.+.+.+.|+++|++.+...+...+++.|.+|+++|++..+..+....+|..++|.
T Consensus 87 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~ 145 (392)
T PRK10473 87 LAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPV 145 (392)
T ss_pred HhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999998888888777764
No 47
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.80 E-value=1.3e-19 Score=129.34 Aligned_cols=134 Identities=18% Similarity=0.082 Sum_probs=124.9
Q ss_pred HHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhh
Q 039580 14 AGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTT 93 (149)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~ 93 (149)
.++....+....+...|.+.+++|.|+++.+++.+.+.++..++.++.|+++||+|||+.+..+..+.+++.+...++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~ 82 (379)
T TIGR00881 3 GYAAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTS 82 (379)
T ss_pred hhhHHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhh
Confidence 35566677778888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccc
Q 039580 94 FFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 94 ~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp 147 (149)
++.+++.|++.|++.+...+..++++.|++|+++|++..++.+....+|..++|
T Consensus 83 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 136 (379)
T TIGR00881 83 LWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLP 136 (379)
T ss_pred HHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHH
Confidence 999999999999999999999999999999999999999999999999988887
No 48
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.79 E-value=4.6e-19 Score=130.74 Aligned_cols=145 Identities=14% Similarity=0.083 Sum_probs=126.1
Q ss_pred cchHHHHHHHHHHHHHhhhcccccchHHHHh----------------------hcCCCcchhhHHHHHHHHHHHhhhhhH
Q 039580 4 ETLTMVLVNLAGIMERADESLLPGVYKEVGA----------------------ALCTDPTGLGSLTLFRSIVQSSCYPLA 61 (149)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 61 (149)
|+.....+.+.......++...+...+.+.+ |++.++.+.+++.+.+.+++.+++++.
T Consensus 17 r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~ 96 (465)
T TIGR00894 17 RLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIIIQIPV 96 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHHHcch
Confidence 4455566666777778888877777766655 788999999999999999999999999
Q ss_pred hHhhhhccchHHHHHHHHHHHHHHHHHHHh--hhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHh
Q 039580 62 AYLSVHHNCAHIIALGAFLWAAATFLVAIS--TTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTG 139 (149)
Q Consensus 62 g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 139 (149)
|+++||+|+|+.+..+.+++++..++..++ ++++.+++.|+++|++.+...+....++.|++|+++|+++.++...+.
T Consensus 97 g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 176 (465)
T TIGR00894 97 GYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGF 176 (465)
T ss_pred HHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 999999999999999998888887765443 557789999999999999999999999999999999999999999999
Q ss_pred hhhhhcccc
Q 039580 140 NFGSIIGGL 148 (149)
Q Consensus 140 ~~g~~igp~ 148 (149)
.+|..++|.
T Consensus 177 ~~g~~i~~~ 185 (465)
T TIGR00894 177 QLGTFIFLP 185 (465)
T ss_pred HHHHHHHHH
Confidence 999988875
No 49
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.79 E-value=1.3e-18 Score=128.11 Aligned_cols=135 Identities=13% Similarity=-0.060 Sum_probs=114.1
Q ss_pred HHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHH
Q 039580 9 VLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLV 88 (149)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~ 88 (149)
....+.......+........|++.++ |.++.+.+++.+.+.++.++++++.|+++||+|||+++..+..+.++..+..
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~ 110 (452)
T PRK11273 32 LGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFM 110 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHH
Confidence 333344444444555566678888887 9999999999999999999999999999999999999999999988888777
Q ss_pred HHh----hhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhh
Q 039580 89 AIS----TTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSI 144 (149)
Q Consensus 89 ~~~----~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 144 (149)
.+. ++++.+++.|++.|++.+...+.....+.|++|+++|+++.++++.+.++|..
T Consensus 111 ~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 170 (452)
T PRK11273 111 GFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGG 170 (452)
T ss_pred HhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhh
Confidence 664 36778889999999999988888888899999999999999999888888764
No 50
>PRK11043 putative transporter; Provisional
Probab=99.78 E-value=5.8e-18 Score=122.66 Aligned_cols=134 Identities=15% Similarity=0.101 Sum_probs=116.6
Q ss_pred HHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhh
Q 039580 15 GIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTF 94 (149)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (149)
............+..|.+.+++|.++++.++..+.+.++..+++++.|+++||+|||+.+..+.....++.....+.+++
T Consensus 15 ~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 94 (401)
T PRK11043 15 SMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESA 94 (401)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCH
Confidence 33444445556667788889999999999999999999999999999999999999999999998988888888888999
Q ss_pred HHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 95 FQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 95 ~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
+.+.+.|+++|++.+...+...+++.|++|++++++..+.......++..++|.
T Consensus 95 ~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 148 (401)
T PRK11043 95 AQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPL 148 (401)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988888888899999999999999988887777777766664
No 51
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.78 E-value=3e-18 Score=127.62 Aligned_cols=143 Identities=13% Similarity=0.091 Sum_probs=122.5
Q ss_pred hHHHHHHHHHHHHHhhhcccccchHHHHhhc-----CCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHH
Q 039580 6 LTMVLVNLAGIMERADESLLPGVYKEVGAAL-----CTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFL 80 (149)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~ 80 (149)
+......+..+....+....+...|.+.+++ +.+..+.+++.+.+.++..++.++.|+++||+|||+++..+.+.
T Consensus 16 ~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~ 95 (502)
T TIGR00887 16 RAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELII 95 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHH
Confidence 4455566777888888888888888776542 34455778999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhh------hHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 81 WAAATFLVAISTT------FFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 81 ~~~~~~~~~~~~~------~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
..++.+...++++ ++.+++.|+++|++.+...+....++.|++|+++|+++.++.+....+|..+++.
T Consensus 96 ~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~ 169 (502)
T TIGR00887 96 MIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAI 169 (502)
T ss_pred HHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9888887777654 6789999999999999999999999999999999999999999999888877653
No 52
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.78 E-value=5.1e-18 Score=123.23 Aligned_cols=140 Identities=17% Similarity=0.176 Sum_probs=122.3
Q ss_pred HHHHHHHHHHHhhhcccccc-hHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHH
Q 039580 9 VLVNLAGIMERADESLLPGV-YKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFL 87 (149)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~ 87 (149)
..+....++.........+. .+++.+++|.|+.+.|+..+...+...+..++.|+++||+|||+++..+....+++.+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~ 92 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFAT 92 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 34445555555555544444 55567899999999999999999999999999999999999999999999999999988
Q ss_pred HHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 88 VAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 88 ~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
....++++.+.+.|+++|++.+...+...+++.|.+|+|+|+++.++.+...++|..+||.
T Consensus 93 ~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~ 153 (400)
T PRK11646 93 MAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGAL 153 (400)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888999999999999999999889999999999999999999999999999999988875
No 53
>PRK09952 shikimate transporter; Provisional
Probab=99.78 E-value=4.5e-18 Score=124.81 Aligned_cols=143 Identities=11% Similarity=0.094 Sum_probs=118.0
Q ss_pred cchHHHHHHHHHHHHHhhhcccccchHH-HHhhc--CCCcchhhHHH-----HHHHHHHHhhhhhHhHhhhhccchHHHH
Q 039580 4 ETLTMVLVNLAGIMERADESLLPGVYKE-VGAAL--CTDPTGLGSLT-----LFRSIVQSSCYPLAAYLSVHHNCAHIIA 75 (149)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~-----~~~~~~~~~~~~~~g~l~dr~g~~~~~~ 75 (149)
+++......+.++++..|........|. +.+++ +.++. .++.. +...++..+++++.|+++||+|||+.+.
T Consensus 20 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~ 98 (438)
T PRK09952 20 ARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLM 98 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHH
Confidence 3456667777888899998888877764 45555 56655 35443 2344567788899999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhH--------HHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccc
Q 039580 76 LGAFLWAAATFLVAISTTFF--------QVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp 147 (149)
.+...++++..+..+++++. .+++.|+++|++.+..++....++.|++|+|+|++..+..+.+..+|..+++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~ 178 (438)
T PRK09952 99 LTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLST 178 (438)
T ss_pred HHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998876 4888999999999999999999999999999999999999888888887663
No 54
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.78 E-value=3.8e-18 Score=122.47 Aligned_cols=126 Identities=13% Similarity=0.125 Sum_probs=117.4
Q ss_pred cccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Q 039580 23 SLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSRG 102 (149)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (149)
.+..+..|.+.+++|.|+++.++..+.+.++..++.++.|+++||+|||+.+..+....+++.....+.++++.+.+.|+
T Consensus 8 ~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 87 (377)
T PRK11102 8 DMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRF 87 (377)
T ss_pred HHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 44567889999999999999999999999999999999999999999999999999999999988888999999999999
Q ss_pred hhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 103 LNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 103 ~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
+.|++.+...+...+++.|++|+++|++..++.+....+|..++|.
T Consensus 88 l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 133 (377)
T PRK11102 88 LHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPI 133 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999988888888764
No 55
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.78 E-value=8.2e-18 Score=122.11 Aligned_cols=143 Identities=15% Similarity=0.248 Sum_probs=117.4
Q ss_pred chHHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHH
Q 039580 5 TLTMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAA 84 (149)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~ 84 (149)
++.+....+..+.............+.+.+|+|.|+.+.++..+.+.++..+++++.|++.||+||||.+..+....+++
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~ 91 (402)
T TIGR00897 12 PLNLLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVG 91 (402)
T ss_pred CchhhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 34455555566666655555555566677899999999999999999999999999999999999999999999888887
Q ss_pred HHHHH---H-hhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhh-hccc
Q 039580 85 TFLVA---I-STTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGS-IIGG 147 (149)
Q Consensus 85 ~~~~~---~-~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~-~igp 147 (149)
..... . .++++.+++.|.+.|++.+...+.....+.+.+|+|+|++++|+.+...++|. .++|
T Consensus 92 ~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~ 159 (402)
T TIGR00897 92 HAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGS 159 (402)
T ss_pred HHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65442 2 35788888999999999888888888889999999999999999998888886 4555
No 56
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.77 E-value=3.6e-18 Score=125.18 Aligned_cols=133 Identities=17% Similarity=0.182 Sum_probs=114.7
Q ss_pred HHHHhhhcccccchHHHHhhcCCC--------cchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHH
Q 039580 16 IMERADESLLPGVYKEVGAALCTD--------PTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFL 87 (149)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~ 87 (149)
+....+........|...++++.+ ..+.+++.+.+.++..+++++.|+++||+|||+++..+..+..++...
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~ 117 (481)
T TIGR00879 38 LMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAIL 117 (481)
T ss_pred HhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 334445556666777777777666 789999999999999999999999999999999999999998888877
Q ss_pred HHHh---hhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 88 VAIS---TTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 88 ~~~~---~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
.... .+++.+++.|+++|++.+...+....++.|++|+++|+++.++.+....+|..++|.
T Consensus 118 ~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~ 181 (481)
T TIGR00879 118 MGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYG 181 (481)
T ss_pred HHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHH
Confidence 7543 345588999999999999999999999999999999999999999999999988875
No 57
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.77 E-value=1.9e-17 Score=119.93 Aligned_cols=143 Identities=17% Similarity=0.174 Sum_probs=122.4
Q ss_pred chHHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcch-----hhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHH
Q 039580 5 TLTMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTG-----LGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAF 79 (149)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~ 79 (149)
++......+..+..........+..|.+.+++|.+..+ .+++.+.+.+...++.++.|+++||+|||+.+..+..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 92 (408)
T PRK09874 13 KRNLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSAL 92 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHH
Confidence 44455666677777777777888899999999988655 4788899999999999999999999999999999998
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 80 LWAAATFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
..+++.......++++.+++.|++.|++.+ ..+.....+.+..|+++|++..+..+....+|..++|.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 160 (408)
T PRK09874 93 GMGIVMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPL 160 (408)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 888888888888999999999999999765 56777888999999999999999999988888888764
No 58
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.76 E-value=6e-18 Score=124.08 Aligned_cols=143 Identities=15% Similarity=-0.018 Sum_probs=118.7
Q ss_pred chHHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHH
Q 039580 5 TLTMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAA 84 (149)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~ 84 (149)
++.++...+.+.....+........|++.+ .|.|+++.++..+.+.++..++.++.|+++||+|||+.+..+..+.+++
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~ 104 (438)
T TIGR00712 26 WQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAV 104 (438)
T ss_pred HHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHH
Confidence 334445555555566666666666777765 5999999999999999999999999999999999999999988888888
Q ss_pred HHHHHHh----hhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 85 TFLVAIS----TTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 85 ~~~~~~~----~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
....... ++.+.+.+.|++.|++.+..++.....+.|++|+++|++++++.+....+|..++|.
T Consensus 105 ~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~ 172 (438)
T TIGR00712 105 MLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPL 172 (438)
T ss_pred HHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHH
Confidence 7766543 456777888999999999888988999999999999999999999999888877653
No 59
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.76 E-value=1.1e-17 Score=123.93 Aligned_cols=145 Identities=14% Similarity=0.121 Sum_probs=126.8
Q ss_pred cchHHHHHHHHHHHHHhhhcccccchHHH-Hhh--cCCCcchhhHHHHHHHHHHHhhhhhHhHhhhh-ccchHHHHHHHH
Q 039580 4 ETLTMVLVNLAGIMERADESLLPGVYKEV-GAA--LCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVH-HNCAHIIALGAF 79 (149)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~ 79 (149)
+.+.+..+.+..+.+...++...+..|.+ .++ +|.+..+.+++.+.+.++..++.++.|+++|| +|||+++.++..
T Consensus 8 ~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~ 87 (475)
T TIGR00924 8 HPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGI 87 (475)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHH
Confidence 44566677777777778877766666666 455 89999999999999999999999999999999 899999999999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCc---hhhHHHHHHHHhhhhhhcccc
Q 039580 80 LWAAATFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESN---RGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~---r~~~~~~~~~~~~~g~~igp~ 148 (149)
..+++.+...++++++.+.+.+.+.|++.+...+...+++.|++|+++ |+++.++++...++|..+||.
T Consensus 88 ~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~ 159 (475)
T TIGR00924 88 VLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPL 159 (475)
T ss_pred HHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHH
Confidence 999999888888888888899999999999999999999999998764 888999999999999998875
No 60
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.75 E-value=1.2e-17 Score=124.09 Aligned_cols=146 Identities=16% Similarity=0.126 Sum_probs=123.3
Q ss_pred ccchHHHHHHHHHHHHHhhhcccccc-hHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhh-ccchHHHHHHHHH
Q 039580 3 SETLTMVLVNLAGIMERADESLLPGV-YKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVH-HNCAHIIALGAFL 80 (149)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~ 80 (149)
++++.++.++...+.+...++..... ..++.+++|.+..+..++.+.+.....+..++.|+++|| +||||++..+..+
T Consensus 11 ~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~ 90 (489)
T PRK10207 11 QQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIV 90 (489)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHH
Confidence 44566777777777788877766554 555578899999999999999998888889999999999 9999999999999
Q ss_pred HHHHHHHHHHhhhhHH-HHHHHHhhhhHHHHHHHhHHHHHhhhcccC--chhhHHHHHHHHhhhhhhcccc
Q 039580 81 WAAATFLVAISTTFFQ-VAVSRGLNGIGLAIVTLAIQSLVADSTDES--NRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 81 ~~~~~~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~igp~ 148 (149)
+.++.+.+.++++... +++.|.++|++.+...|...+++.|.+|++ +|.++.++++...++|..+||.
T Consensus 91 ~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~ 161 (489)
T PRK10207 91 LAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLS 161 (489)
T ss_pred HHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHH
Confidence 9999988888766444 557899999999999999999999999877 4577899999999999988874
No 61
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.74 E-value=6e-17 Score=119.41 Aligned_cols=129 Identities=14% Similarity=0.126 Sum_probs=111.9
Q ss_pred HhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH
Q 039580 19 RADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVA 98 (149)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (149)
.......+...|.+.+++|.+.++.++..+.+.+...++.++.|+++||+|||++++.+..+..++.+...++++++.++
T Consensus 32 ~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~ 111 (455)
T TIGR00892 32 YAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELY 111 (455)
T ss_pred HhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHH
Confidence 33444567778999999999999999999999999999999999999999999999999999998888888888988876
Q ss_pred H-HHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 99 V-SRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 99 ~-~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
+ .|++.|++.+...+....++.++++ ++|+++.++.+.+..+|..++|.
T Consensus 112 ~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~ 161 (455)
T TIGR00892 112 LTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAP 161 (455)
T ss_pred HHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHH
Confidence 5 4688999988776777788889985 89999999999999988877764
No 62
>TIGR00898 2A0119 cation transport protein.
Probab=99.73 E-value=8.2e-18 Score=125.16 Aligned_cols=122 Identities=15% Similarity=0.067 Sum_probs=113.7
Q ss_pred cchHHHHhhcCCC---cchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHh
Q 039580 27 GVYKEVGAALCTD---PTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSRGL 103 (149)
Q Consensus 27 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (149)
...|.+.+|++++ +.+.++..+.+.++..++.++.|+++||+|||+++..+..+..++.+...++++++.+++.|++
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l 189 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLL 189 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 4567778899998 8899999999999999999999999999999999999999999999888899999999999999
Q ss_pred hhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 104 NGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 104 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
.|++.+...+....++.|++|+++|++..++......+|..++|.
T Consensus 190 ~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~ 234 (505)
T TIGR00898 190 VGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPL 234 (505)
T ss_pred HHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999899988887764
No 63
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.73 E-value=1.6e-17 Score=121.07 Aligned_cols=140 Identities=13% Similarity=-0.002 Sum_probs=118.8
Q ss_pred HHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHH
Q 039580 9 VLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLV 88 (149)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~ 88 (149)
.......++............|.+.++++.++.+.+++.+.+.++..+++++.|+++||+|||+++..+..+.+++....
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~ 99 (417)
T PRK10489 20 RAVFIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGL 99 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHH
Confidence 34444556666666677778899989998899999999999999999999999999999999999888877776665443
Q ss_pred HH-----hhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 89 AI-----STTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 89 ~~-----~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
.. .++++.+.+.|++.|++.+...+..++.+.|+.|+++|+++.++.+...++|..+||.
T Consensus 100 ~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 164 (417)
T PRK10489 100 ALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPA 164 (417)
T ss_pred HHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHH
Confidence 32 4677888899999999999888999999999999999999999999999998888875
No 64
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.73 E-value=6.9e-17 Score=115.36 Aligned_cols=124 Identities=19% Similarity=0.249 Sum_probs=110.7
Q ss_pred cccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Q 039580 23 SLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSRG 102 (149)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (149)
....+..|.+.+++|.|+++.++..+.+.++..++.++.|++.||+||||.+..+.....++.... ..++.+.+++.|+
T Consensus 17 ~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~ 95 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTA 95 (355)
T ss_pred ccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHH
Confidence 456778999999999999999999999999999999999999999999999999988877777666 6788888999999
Q ss_pred hhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 103 LNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 103 ~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
+.|++.+...+..+....|.+| ++|++..+..+...++|..++|.
T Consensus 96 ~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~ 140 (355)
T TIGR00896 96 LIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAA 140 (355)
T ss_pred HHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHH
Confidence 9999999888888888888885 68999999999888888877653
No 65
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.71 E-value=6.2e-18 Score=128.80 Aligned_cols=140 Identities=18% Similarity=0.232 Sum_probs=122.9
Q ss_pred HHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHH
Q 039580 9 VLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLV 88 (149)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~ 88 (149)
....+..+.........+...+.+.+++++++.+.|++.+.+.+++++..++.+++.||+||||.+.++.++++++.++.
T Consensus 36 ~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~ 115 (633)
T TIGR00805 36 LLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLL 115 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHH
Confidence 33444555566666777888999999999999999999999999999999999999999999999999999999999887
Q ss_pred HHhh---------------------------------------------------hhHHHHHHHHhhhhHHHHHHHhHHH
Q 039580 89 AIST---------------------------------------------------TFFQVAVSRGLNGIGLAIVTLAIQS 117 (149)
Q Consensus 89 ~~~~---------------------------------------------------~~~~~~~~~~~~G~~~~~~~~~~~~ 117 (149)
++.+ .+..++++|+++|+|.+..++...+
T Consensus 116 alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~ 195 (633)
T TIGR00805 116 SLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGIS 195 (633)
T ss_pred hChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCch
Confidence 6643 2445778999999999999999999
Q ss_pred HHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 118 LVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 118 ~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
++.|++|+++|+++.++++....+|..+|++
T Consensus 196 ~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~l 226 (633)
T TIGR00805 196 YIDDFAKSKNSPLYIGILESIAVFGPAFGYL 226 (633)
T ss_pred hhhccCCccccHHHHHHHHHHHHhhhHHHHH
Confidence 9999999999999999999999999888864
No 66
>PTZ00207 hypothetical protein; Provisional
Probab=99.71 E-value=3.6e-16 Score=117.56 Aligned_cols=124 Identities=18% Similarity=0.177 Sum_probs=108.3
Q ss_pred hhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHh------hh
Q 039580 20 ADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAIS------TT 93 (149)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~------~~ 93 (149)
...+.++...|.+.+++|+|..+.+++.+.. ......+++.|++.||+|+|+++.++.+++.++.++..++ ++
T Consensus 41 g~~y~fsv~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s 119 (591)
T PTZ00207 41 SFMYAFNLISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGS 119 (591)
T ss_pred HHHHHHHHHHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCc
Confidence 3345667778899999999999999988763 3445677789999999999999999999999999888876 68
Q ss_pred hHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhc
Q 039580 94 FFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSII 145 (149)
Q Consensus 94 ~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i 145 (149)
++.+.+.|.+.|++.+...+.....+.+++| ++||++.|+.....++|.++
T Consensus 120 ~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI 170 (591)
T PTZ00207 120 VVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAI 170 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988999999995 78999999999999999875
No 67
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.69 E-value=7.7e-16 Score=110.31 Aligned_cols=136 Identities=17% Similarity=0.111 Sum_probs=109.0
Q ss_pred HHHHHHHhhhcccccchHH-HHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHH-HHHHHHHHHHHHHH
Q 039580 13 LAGIMERADESLLPGVYKE-VGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIAL-GAFLWAAATFLVAI 90 (149)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~-~~~~~~~~~~~~~~ 90 (149)
+.++..........+..|. +.+++|.|+.+.+++.+.+.+...+.+++.|+++||+||||.+.. +.....++.....+
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~ 83 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAW 83 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHh
Confidence 3456666666666666665 568899999999999999999999999999999999999887654 45555566667778
Q ss_pred hhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhH--HHHHHHHhhhhhhcccc
Q 039580 91 STTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMA--FGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 91 ~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~--~~~~~~~~~~g~~igp~ 148 (149)
+++++.+++.|.+.|.+.+...|...++..|..|+++|.+. .+......++|..+||.
T Consensus 84 ~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~ 143 (375)
T TIGR00899 84 NRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPP 143 (375)
T ss_pred cchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhh
Confidence 89999999999999888888888888888999887777754 56777777888888775
No 68
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.68 E-value=1.1e-16 Score=113.91 Aligned_cols=141 Identities=16% Similarity=0.071 Sum_probs=122.0
Q ss_pred ccchHHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHH
Q 039580 3 SETLTMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWA 82 (149)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~ 82 (149)
.+++.++...+...........++++.+.+.+++|+|++|.+++.+...+...+...+.|.+.||+|.|++...+.++..
T Consensus 11 ~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~ 90 (417)
T COG2223 11 IARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLL 90 (417)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHH
Confidence 34566666666666667777788888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh---hHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhc
Q 039580 83 AATFLVAISTT---FFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSII 145 (149)
Q Consensus 83 ~~~~~~~~~~~---~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i 145 (149)
+..+...++.+ ++++++.+.+.|++.+ .+......+++++|||++|.++|++. ..|+|..+
T Consensus 91 IP~~~~~~a~~~~~~~~ll~~gll~G~~Ga-sFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av 154 (417)
T COG2223 91 IPCLGLAFAVTYPSTWQLLVIGLLLGLAGA-SFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAV 154 (417)
T ss_pred HHHHHHHHHccCCchHHHHHHHHHHhcccc-eehcccccccccCChhhhhHHHHHhc-cccccHHH
Confidence 99988887654 4599999999999765 66778899999999999999999987 66776654
No 69
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.65 E-value=7.9e-15 Score=105.92 Aligned_cols=140 Identities=11% Similarity=-0.009 Sum_probs=117.4
Q ss_pred HHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHH
Q 039580 8 MVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFL 87 (149)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~ 87 (149)
++...+..++............|.+.+|.|.++.+.+.......++..+..++.+++.||+|+|+.+.++.....+....
T Consensus 207 ~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~ 286 (382)
T TIGR00902 207 NLRFLAAVCLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAI 286 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444555666666789999999999999999999999999999999999999999999999999888
Q ss_pred HHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHH-HHhhhhhhcccc
Q 039580 88 VAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQ-LTGNFGSIIGGL 148 (149)
Q Consensus 88 ~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~igp~ 148 (149)
..+.++.+.++..+.+.|+..+...+....++.+. |+++|++++++++ ...++|..+||.
T Consensus 287 ~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~ 347 (382)
T TIGR00902 287 IGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTA 347 (382)
T ss_pred HHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999988 9999999999986 456677776664
No 70
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.65 E-value=6.8e-15 Score=106.73 Aligned_cols=126 Identities=15% Similarity=0.036 Sum_probs=107.4
Q ss_pred ccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHh
Q 039580 24 LLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSRGL 103 (149)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (149)
......|.+.++.|.++.+.+.......++..++.++.|++.||+|+|+.+..+.....++.......++.+.+.+..++
T Consensus 238 ~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (406)
T PRK11551 238 FLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFA 317 (406)
T ss_pred HHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 34445677778889999999999999999999999999999999999999888766666666666666777777777788
Q ss_pred hhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccccC
Q 039580 104 NGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGLC 149 (149)
Q Consensus 104 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~~ 149 (149)
.|++.+...+...++..|.+|+++|++..|+.+....+|..+||.+
T Consensus 318 ~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~ 363 (406)
T PRK11551 318 AGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLL 363 (406)
T ss_pred HHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhh
Confidence 8888888888899999999999999999999999999999888763
No 71
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.64 E-value=6.5e-16 Score=109.01 Aligned_cols=109 Identities=23% Similarity=0.180 Sum_probs=99.4
Q ss_pred cchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHH
Q 039580 40 PTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLV 119 (149)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~ 119 (149)
..-.|.+.+.+++.+.+.++.+|.++||+|||+++..+.+..++.....+.++|+..++..|++.|+.-+ ......+++
T Consensus 67 ~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kg-nl~v~rAii 145 (451)
T KOG2615|consen 67 VFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKG-NLSVIRAII 145 (451)
T ss_pred chhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC-chHHHHHHH
Confidence 3346888899999999999999999999999999999999999999999999999778888999999877 445678999
Q ss_pred hhhcccCchhhHHHHHHHHhhhhhhccccC
Q 039580 120 ADSTDESNRGMAFGWLQLTGNFGSIIGGLC 149 (149)
Q Consensus 120 ~~~~~~~~r~~~~~~~~~~~~~g~~igp~~ 149 (149)
+|..++|+|+.+++..++.+++|.++||.+
T Consensus 146 sdV~sek~r~l~ms~v~~a~~lGfilGPmI 175 (451)
T KOG2615|consen 146 SDVVSEKYRPLGMSLVGTAFGLGFILGPMI 175 (451)
T ss_pred HhhcChhhccceeeeeehhhhcchhhcchh
Confidence 999999999999999999999999999974
No 72
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.64 E-value=4.7e-15 Score=110.60 Aligned_cols=143 Identities=20% Similarity=0.137 Sum_probs=113.9
Q ss_pred hHHHHHHHHHHHHHhhhcccccchHH-HHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhh-ccchHHHHHHHHHHHH
Q 039580 6 LTMVLVNLAGIMERADESLLPGVYKE-VGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVH-HNCAHIIALGAFLWAA 83 (149)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~~~~ 83 (149)
+.++..+...+.+...++....+.+. +.+++|.+..+.++..+.+........++.|+++|| +|||+.+..+....++
T Consensus 21 ~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~i 100 (500)
T PRK09584 21 KAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAI 100 (500)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 34556666677777776666555544 468899999998888877776666666799999999 5999999999999998
Q ss_pred HHHHHHHhh-hhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCc--hhhHHHHHHHHhhhhhhcccc
Q 039580 84 ATFLVAIST-TFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESN--RGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 84 ~~~~~~~~~-~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~--r~~~~~~~~~~~~~g~~igp~ 148 (149)
+.....+++ +.+.+.+.+.++|++.+...+...+++.|++|+++ |.++.++++...++|..+||.
T Consensus 101 g~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~ 168 (500)
T PRK09584 101 GYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSML 168 (500)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHH
Confidence 888777764 45667788899999999999999999999997654 456788888899999988875
No 73
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.64 E-value=5.1e-15 Score=109.61 Aligned_cols=144 Identities=17% Similarity=0.118 Sum_probs=112.8
Q ss_pred chHHHHHHHHHHHHHhhhcccccchHHH-HhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhc-cchHHHHHHHHHHH
Q 039580 5 TLTMVLVNLAGIMERADESLLPGVYKEV-GAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHH-NCAHIIALGAFLWA 82 (149)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~ 82 (149)
++.+..++...+.+...++.+....|.+ .+++|.++.+.+.+.+.+.....++.++.|+++||+ ||||.+..+.++..
T Consensus 8 p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~ 87 (493)
T PRK15462 8 PRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMA 87 (493)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHH
Confidence 4455555666666777766666666655 567899999999999999999999999999999999 99999999999988
Q ss_pred HHHHHHHHhh-hhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccC--chhhHHHHHHHHhhhhhhcccc
Q 039580 83 AATFLVAIST-TFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDES--NRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 83 ~~~~~~~~~~-~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~igp~ 148 (149)
++.+.....+ +...+.+...+..++.+...+...+++.|.+|++ +|.++.++.+...++|..++|.
T Consensus 88 lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~ 156 (493)
T PRK15462 88 IGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPI 156 (493)
T ss_pred HHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHH
Confidence 8876655433 2233444444555666777788889999999876 7999999999999999998875
No 74
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.63 E-value=4.5e-15 Score=119.61 Aligned_cols=142 Identities=13% Similarity=0.039 Sum_probs=111.1
Q ss_pred HHHHHHHHHHHHHhhh-cccccchHHHHhhcCCCc--chhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHH
Q 039580 7 TMVLVNLAGIMERADE-SLLPGVYKEVGAALCTDP--TGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAA 83 (149)
Q Consensus 7 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~ 83 (149)
.+...++..++..+.. .......+.+.++++.+. ...+++.+.+.+++.++++++|+++||+|||+++.++..+.++
T Consensus 10 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~ 89 (1146)
T PRK08633 10 GFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVG 89 (1146)
T ss_pred hhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHH
Confidence 3344444444444333 333444555666666643 3468888999999999999999999999999999988766555
Q ss_pred HHHHH---HHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 84 ATFLV---AISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 84 ~~~~~---~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
..++. ...++++.+++.|+++|++.+...+...+++.|++|+++|++++++.+....+|..+||.
T Consensus 90 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~ 157 (1146)
T PRK08633 90 LTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTA 157 (1146)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHH
Confidence 44433 345788999999999999999999999999999999999999999999999999888875
No 75
>TIGR00895 2A0115 benzoate transport.
Probab=99.63 E-value=1.5e-14 Score=103.95 Aligned_cols=135 Identities=13% Similarity=-0.003 Sum_probs=106.7
Q ss_pred HHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhh
Q 039580 15 GIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTF 94 (149)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (149)
.+...........+.|.+.+++|.++.+.+.......++..++.++.+++.||+++|+...................++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (398)
T TIGR00895 259 YFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSP 338 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCH
Confidence 33333444444556778888999999999999999999999999999999999999855444333333333333335667
Q ss_pred HHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccccC
Q 039580 95 FQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGLC 149 (149)
Q Consensus 95 ~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~~ 149 (149)
+...+..++.|++.+...+...+++.|.+|+++|+++.|+.+....+|..+||.+
T Consensus 339 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~ 393 (398)
T TIGR00895 339 TLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPIL 393 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7777888899999999999999999999999999999999999999999998863
No 76
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.63 E-value=4.4e-15 Score=105.37 Aligned_cols=115 Identities=24% Similarity=0.299 Sum_probs=107.7
Q ss_pred hcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhhhHHHHHHHh
Q 039580 35 ALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSRGLNGIGLAIVTLA 114 (149)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ 114 (149)
+.+.+..+.|++..+..+.+.+.+|+.|.+.||+|+|-.+++|++.+...++++++.++++.+.+.|.+||+|.+...++
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~ts 179 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTS 179 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhh
Confidence 34557788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcccCc-hhhHHHHHHHHhhhhhhccccC
Q 039580 115 IQSLVADSTDESN-RGMAFGWLQLTGNFGSIIGGLC 149 (149)
Q Consensus 115 ~~~~~~~~~~~~~-r~~~~~~~~~~~~~g~~igp~~ 149 (149)
..++++|.+|+++ |++++|+...+-++|..+||.+
T Consensus 180 glamlAd~f~~d~er~~vmGialgfislG~lvgPpf 215 (464)
T KOG3764|consen 180 GLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPF 215 (464)
T ss_pred hHHHHHHHcccchhhhHHHHHHHHHHhccceecCCc
Confidence 9999999998665 6999999999999999999864
No 77
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.63 E-value=2e-15 Score=108.32 Aligned_cols=133 Identities=13% Similarity=0.096 Sum_probs=106.8
Q ss_pred HHHHhhhcccccchHHHHhhcC--CCcchhhHHHHH--H---HHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHH
Q 039580 16 IMERADESLLPGVYKEVGAALC--TDPTGLGSLTLF--R---SIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLV 88 (149)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~---~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~ 88 (149)
+.+..++...+...+.+.+++. .++++.+...+. + .+...+++++.|+++||+|||+.+..+.....++....
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~ 82 (394)
T TIGR00883 3 AVEWFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLI 82 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 3456677777777777776654 344555554432 2 33334688999999999999999999999999998888
Q ss_pred HHhhhhH--------HHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 89 AISTTFF--------QVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 89 ~~~~~~~--------~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
.+++++. .+++.|+++|++.+...+..+.++.|++|+|+|++..+..+.+..+|..++|.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~ 150 (394)
T TIGR00883 83 GLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAAL 150 (394)
T ss_pred hhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHH
Confidence 8887764 47888999999999999999999999999999999999999999998887764
No 78
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.63 E-value=9.7e-15 Score=103.16 Aligned_cols=138 Identities=21% Similarity=0.189 Sum_probs=118.9
Q ss_pred HHHHHHHHHhhhcccccchHHHHhh-cCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchH-HHHHHHHHHHHHHHHH
Q 039580 11 VNLAGIMERADESLLPGVYKEVGAA-LCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAH-IIALGAFLWAAATFLV 88 (149)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~-~~~~~~~~~~~~~~~~ 88 (149)
..+..+.............|.+.++ +|.++.+.++......++..++.++.+++.||+|||+ .+..+.....++....
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 259 (352)
T cd06174 180 LALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLL 259 (352)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 3334444445555555566666555 4889999999999999999999999999999999999 9999999988888888
Q ss_pred HHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 89 AISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 89 ~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
...++.+.......+.|++.+...+...++..|..|+|+|++..+..+...++|..++|.
T Consensus 260 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 319 (352)
T cd06174 260 ALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPL 319 (352)
T ss_pred HHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888889999999999999999999999999999999999999999999999888775
No 79
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.62 E-value=1.5e-14 Score=102.80 Aligned_cols=143 Identities=15% Similarity=0.029 Sum_probs=127.4
Q ss_pred HHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHH
Q 039580 7 TMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATF 86 (149)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 86 (149)
.+.......+..........+..|.+.+.++++..|.+.+...+..++.+.+.+.+++.+|+|+|+-+..++.+.+++..
T Consensus 14 ~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~ 93 (422)
T COG0738 14 AFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAA 93 (422)
T ss_pred HHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 34444445555556666778899999999999999999999999999999999999999999999999999999999987
Q ss_pred HHH---HhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccccC
Q 039580 87 LVA---ISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGLC 149 (149)
Q Consensus 87 ~~~---~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~~ 149 (149)
+.. ...++..+++..++.|.|.+...+..+.++....|+++..+.+.+.+..+++|..+||++
T Consensus 94 lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~ 159 (422)
T COG0738 94 LFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLL 159 (422)
T ss_pred HHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHH
Confidence 763 556888899999999999999999999999999999999999999999999999999863
No 80
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.62 E-value=1.4e-14 Score=103.09 Aligned_cols=122 Identities=15% Similarity=0.102 Sum_probs=107.0
Q ss_pred cchHHHHhh-cCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHhh
Q 039580 27 GVYKEVGAA-LCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTT-FFQVAVSRGLN 104 (149)
Q Consensus 27 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 104 (149)
...|.+.++ +|.++.+.+.......++..++.++.+++.||++||+.+..+....++......+.++ .+...+..++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAI 311 (365)
T ss_pred HHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHH
Confidence 566777655 8999999999999999999999999999999999999988887777777666666664 77788889999
Q ss_pred hhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 105 GIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 105 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
|++.+...+...+++.|..|+|+|++..++.+....+|..++|.
T Consensus 312 g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~ 355 (365)
T TIGR00900 312 GVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLI 355 (365)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999888875
No 81
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.62 E-value=6.7e-15 Score=105.04 Aligned_cols=123 Identities=20% Similarity=0.161 Sum_probs=102.0
Q ss_pred ccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhh--HHHHHHHHh
Q 039580 26 PGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTF--FQVAVSRGL 103 (149)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 103 (149)
....+.+.+++|.++.+.+...+...++..++.++.|++.||+|||+.+..+.....++.....+.++. ..+.....+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (377)
T TIGR00890 225 IGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVAL 304 (377)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHH
Confidence 344555678889888889999999999999999999999999999999988888888777666655532 334455677
Q ss_pred hhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 104 NGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 104 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
.|++.+...+..+.+..|.+|+++|++..|+.+....+|..++|.
T Consensus 305 ~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~ 349 (377)
T TIGR00890 305 VFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGL 349 (377)
T ss_pred HHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHH
Confidence 788877777778889999999999999999999999999988875
No 82
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.61 E-value=1.6e-14 Score=111.43 Aligned_cols=103 Identities=16% Similarity=0.139 Sum_probs=93.1
Q ss_pred HHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhccc
Q 039580 46 LTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDE 125 (149)
Q Consensus 46 ~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~ 125 (149)
......++..++.++.|+++||+|||+++..+.++.+++.+...+.++...+++.+++.|++.+..++....+++|++|+
T Consensus 600 ~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt 679 (742)
T TIGR01299 600 VNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYPS 679 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH
Confidence 34566788899999999999999999999999999999888888888877788888888988888899999999999999
Q ss_pred CchhhHHHHHHHHhhhhhhcccc
Q 039580 126 SNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 126 ~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
++|++++|+.+....+|.++||.
T Consensus 680 ~~Rgta~Gi~~~~~rlGaiigp~ 702 (742)
T TIGR01299 680 DKRATAFGFLNALCKAAAVLGIL 702 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999985
No 83
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.61 E-value=1.8e-14 Score=107.82 Aligned_cols=105 Identities=20% Similarity=0.291 Sum_probs=100.3
Q ss_pred hhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhh
Q 039580 42 GLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVAD 121 (149)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~ 121 (149)
+.+++.+...++..+++++.|+++|++|||+.+..+.+...++.+...+++|.+.+.++|+++|+|.|......+.+++|
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sE 169 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISE 169 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhh
Confidence 44899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccCchhhHHHHHHHHhhhhhhcc
Q 039580 122 STDESNRGMAFGWLQLTGNFGSIIG 146 (149)
Q Consensus 122 ~~~~~~r~~~~~~~~~~~~~g~~ig 146 (149)
..|++.||...+..+....+|..++
T Consensus 170 iap~~~RG~l~~~~~l~~~~Gi~~~ 194 (513)
T KOG0254|consen 170 IAPAHIRGTLVSLYQLFITIGILLG 194 (513)
T ss_pred cCChhhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988887665
No 84
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.59 E-value=6.5e-15 Score=108.48 Aligned_cols=113 Identities=19% Similarity=0.201 Sum_probs=104.0
Q ss_pred hhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHhhhhHHHHH
Q 039580 34 AALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAIST--TFFQVAVSRGLNGIGLAIV 111 (149)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~G~~~~~~ 111 (149)
.+++.+++|.+++.+.+..++++++.+.|+++||+|.|+++..+.++.++..++...+. +++.+++.|+++|++++..
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~ 145 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVL 145 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHH
Confidence 46788999999999999999999999999999999999999999999999998877653 5567789999999999999
Q ss_pred HHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcc
Q 039580 112 TLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIG 146 (149)
Q Consensus 112 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig 146 (149)
+|+...+..+|.|++||++..++...+..+|.+++
T Consensus 146 ~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~ 180 (466)
T KOG2532|consen 146 FPAIGSILAKWAPPNERSTFIAILTAGSQLGTIIT 180 (466)
T ss_pred HhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888887664
No 85
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.59 E-value=8.6e-14 Score=99.44 Aligned_cols=128 Identities=7% Similarity=-0.023 Sum_probs=99.7
Q ss_pred HHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHH-HHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHh
Q 039580 13 LAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRS-IVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAIS 91 (149)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~ 91 (149)
+..++............|.+.+++|.++++.+.+..... ++..++.++.|++.||+|+|+.+..+.++.++......+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~ 295 (356)
T TIGR00901 216 LLIVLYKLGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWL 295 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444455566666669999999998887665 5778999999999999999999888887776665544332
Q ss_pred -----------hhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhh
Q 039580 92 -----------TTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGN 140 (149)
Q Consensus 92 -----------~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 140 (149)
++.+.+....++.+++.+...+...+++.|.+|+|+|++.+++.+...+
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 296 ASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 3456677778889999999999999999999999999999999877654
No 86
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.59 E-value=7.2e-15 Score=91.12 Aligned_cols=101 Identities=24% Similarity=0.361 Sum_probs=91.7
Q ss_pred HHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCc
Q 039580 48 LFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESN 127 (149)
Q Consensus 48 ~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 127 (149)
+.+.++..++.++.|++.||+|||+.+..+.....++.+.....++.+.+.+.+++.|++.+...+....+..|..|+++
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 84 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEE 84 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhh
Confidence 34567788999999999999999999999988888888877788899999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHhhhhhhcccc
Q 039580 128 RGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 128 r~~~~~~~~~~~~~g~~igp~ 148 (149)
|++..+..+....+|..++|.
T Consensus 85 ~~~~~~~~~~~~~~g~~~~~~ 105 (141)
T TIGR00880 85 RGVALGLMSAGIALGPLLGPP 105 (141)
T ss_pred hhHHHHHHHHhHHHHHHHhHH
Confidence 999999999999999988875
No 87
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.58 E-value=1e-13 Score=100.48 Aligned_cols=122 Identities=14% Similarity=-0.009 Sum_probs=96.3
Q ss_pred ccchHH-HHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhh
Q 039580 26 PGVYKE-VGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSRGLN 104 (149)
Q Consensus 26 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (149)
....|. +.+++|.++.+.+++.+...+...++.++.|+++||+|||+.+..+.....+........++.+...+.+.+.
T Consensus 236 ~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 315 (393)
T PRK15011 236 IINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLN 315 (393)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 344554 4577899999999888887788888999999999999999988777665555444444567777778888888
Q ss_pred hhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 105 GIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 105 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
+++.+...+..+....|..| ++|+++.++++...++|..++|.
T Consensus 316 ~~~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~ 358 (393)
T PRK15011 316 AIYIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRVGWIIAGS 358 (393)
T ss_pred HHHHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHHHHHHH
Confidence 88877777777788889886 56999999988888888888774
No 88
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.58 E-value=3.3e-14 Score=105.27 Aligned_cols=117 Identities=20% Similarity=0.205 Sum_probs=108.5
Q ss_pred HHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhhhHHHHH
Q 039580 32 VGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSRGLNGIGLAIV 111 (149)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 111 (149)
+.+|.+....+.+.+.+++.++++++.++++.+.||++..+.+....+.+++-.++....+|++.+++.|++.|+.++..
T Consensus 72 ~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~ 151 (495)
T KOG2533|consen 72 LKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGG 151 (495)
T ss_pred CccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccc
Confidence 44888899999999999999999999999999999999888888888888777777777899999999999999999999
Q ss_pred HHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 112 TLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 112 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
+|....++..++.+++|++.++++....++|+++|++
T Consensus 152 wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggl 188 (495)
T KOG2533|consen 152 WPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGL 188 (495)
T ss_pred chHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHH
Confidence 9999999999999999999999999999999988875
No 89
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.57 E-value=4e-14 Score=103.49 Aligned_cols=123 Identities=12% Similarity=0.144 Sum_probs=100.4
Q ss_pred ccchHHHHhhcCCCc--------chhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhh----h
Q 039580 26 PGVYKEVGAALCTDP--------TGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAIST----T 93 (149)
Q Consensus 26 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~----~ 93 (149)
..+.+.+.++.+.++ .+.+...+...+...++.++.|++.||+|+|+++..+.+..++........+ +
T Consensus 228 ~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~ 307 (418)
T TIGR00889 228 NIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFG 307 (418)
T ss_pred HHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhh
Confidence 344566666666443 5668888999999999999999999999999999999988888765555432 2
Q ss_pred hHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHH-HHhhhhhhcccc
Q 039580 94 FFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQ-LTGNFGSIIGGL 148 (149)
Q Consensus 94 ~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~igp~ 148 (149)
.+.+++.+++.|++.+...+....++.|.+|+++|++++++.+ ..+++|..+||.
T Consensus 308 ~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~ 363 (418)
T TIGR00889 308 YALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYI 363 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 3556778999999999888999999999999999999999997 567888888875
No 90
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.57 E-value=8.9e-14 Score=100.39 Aligned_cols=121 Identities=11% Similarity=0.097 Sum_probs=97.1
Q ss_pred chHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHH-HHHHhhhhHHHHHHHHhhhh
Q 039580 28 VYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATF-LVAISTTFFQVAVSRGLNGI 106 (149)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~G~ 106 (149)
..+++.+++|.++.+.+++.+...++..++.++.+++.||+|||+.+..+.....+... .....++.+.+.+...+.+.
T Consensus 261 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (405)
T TIGR00891 261 LPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQM 340 (405)
T ss_pred hHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 34455677899999999999999999999999999999999999998877765533322 22334555666666677777
Q ss_pred HHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 107 GLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
..+...+....++.|.+|+++|+++.|+.+...++|..++|.
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~ 382 (405)
T TIGR00891 341 LVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPI 382 (405)
T ss_pred HHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHH
Confidence 767777788889999999999999999999888999888875
No 91
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.57 E-value=5.6e-14 Score=100.86 Aligned_cols=141 Identities=14% Similarity=-0.003 Sum_probs=102.8
Q ss_pred HHHHHHHHHHHHhhhcccccchHHHH-hhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHH-
Q 039580 8 MVLVNLAGIMERADESLLPGVYKEVG-AALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAAT- 85 (149)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~- 85 (149)
+.......+.............|.+. +++|.++++.+.......++..++.++.|++.||+|||+.+........+..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 300 (394)
T TIGR00883 221 FLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAV 300 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHH
Confidence 33334444444444444555566654 7788999999999999999999999999999999999998775554443322
Q ss_pred -HHHHH--hhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHH-HHHHhhhhhhcccc
Q 039580 86 -FLVAI--STTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGW-LQLTGNFGSIIGGL 148 (149)
Q Consensus 86 -~~~~~--~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~igp~ 148 (149)
..... .++.+.......+.|++.+...+..++.+.|.+|+++|+++.++ .+....+|..++|.
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~ 367 (394)
T TIGR00883 301 PLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPY 367 (394)
T ss_pred HHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHH
Confidence 12222 24566666778888988888999999999999999999999987 45555667766664
No 92
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.57 E-value=4.3e-14 Score=114.12 Aligned_cols=108 Identities=13% Similarity=-0.039 Sum_probs=90.8
Q ss_pred chhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHH---HHHHHHHHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHH
Q 039580 41 TGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGA---FLWAAATFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQS 117 (149)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~ 117 (149)
...++..+.+.+.+.+.++++|+++||+|||+++.... +............++++.+++.|+++|++.+...|+..+
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a 131 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYS 131 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHH
Confidence 45788888999999999999999999999999864322 222222222334488999999999999999999999999
Q ss_pred HHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 118 LVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 118 ~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
++.+++|+++|++++|+.++..++|..+||.
T Consensus 132 ~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~ 162 (1140)
T PRK06814 132 ILPDHLNKDELLGANALVEAGTFIAILLGTI 162 (1140)
T ss_pred hhHhhcCccccchhhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999885
No 93
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.57 E-value=1.5e-13 Score=102.71 Aligned_cols=146 Identities=16% Similarity=0.130 Sum_probs=124.2
Q ss_pred cchHHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHH
Q 039580 4 ETLTMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAA 83 (149)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~ 83 (149)
|++.+..+..+..+......+.....+.+..++.-|+...+++.....+...+.++++|.++||++|||+++.+-...++
T Consensus 8 r~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~ 87 (524)
T PF05977_consen 8 RNRNFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRAL 87 (524)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHH
Confidence 44566666777888888777777777777777888999999999999999999999999999999999999988877665
Q ss_pred HHHHHHH-----hhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccccC
Q 039580 84 ATFLVAI-----STTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGLC 149 (149)
Q Consensus 84 ~~~~~~~-----~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~~ 149 (149)
......+ ..+.+.+++..++.|++.+...|+.++.+.|..|+++..+++++.++..+++..+||.+
T Consensus 88 ~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPal 158 (524)
T PF05977_consen 88 VALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPAL 158 (524)
T ss_pred HHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchH
Confidence 4433322 24678889999999999999999999999999999999999999999999999998853
No 94
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.56 E-value=1.6e-13 Score=99.67 Aligned_cols=135 Identities=16% Similarity=0.061 Sum_probs=110.6
Q ss_pred HHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhc-----cchH-HHHHHHHHHHHHH
Q 039580 12 NLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHH-----NCAH-IIALGAFLWAAAT 85 (149)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----g~~~-~~~~~~~~~~~~~ 85 (149)
...++.+...........|.+.++.|.|.++.|++...... .+..+++|+++||+ |||| .+..+....+++.
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~ 82 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASI 82 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHH
Confidence 34566667777777778899999999999999999766655 58899999999999 7765 6777777777777
Q ss_pred HHHHHh---hhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 86 FLVAIS---TTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 86 ~~~~~~---~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
....+. ++.+.+.+..++.+...+...+...+++.|+.|+|+|+++.++...+..+|..+++.
T Consensus 83 ~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~ 148 (402)
T PRK11902 83 AAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGG 148 (402)
T ss_pred HHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhH
Confidence 666665 356777777778888888889999999999999999999999999998888887763
No 95
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.55 E-value=2.6e-14 Score=107.01 Aligned_cols=111 Identities=15% Similarity=0.085 Sum_probs=100.0
Q ss_pred hhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhhhHHHHHHH
Q 039580 34 AALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSRGLNGIGLAIVTL 113 (149)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 113 (149)
+..+.+.....+..+.+.++..++..++|.++||+|||++++++..+..++.+..++++|++.+.+.|++.|++.+....
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~ 190 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLT 190 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhH
Confidence 44566777888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhhhcccCchhhHHHHHHHHhhhhhhc
Q 039580 114 AIQSLVADSTDESNRGMAFGWLQLTGNFGSII 145 (149)
Q Consensus 114 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i 145 (149)
....+..|+.++++|+.+..+ ......+..+
T Consensus 191 ~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~ 221 (521)
T KOG0255|consen 191 VGFGLVAEIVSPKQRGLALTL-GGFFFVGGLM 221 (521)
T ss_pred HhHhhheeecCcchhhHHHHH-HHHHHHHHHH
Confidence 999999999999999999999 4444444333
No 96
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.55 E-value=8.1e-14 Score=99.59 Aligned_cols=123 Identities=13% Similarity=0.009 Sum_probs=99.3
Q ss_pred ccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhc-----cchHHH-HHHHHHHHHHHHHHHHh---hhh
Q 039580 24 LLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHH-----NCAHII-ALGAFLWAAATFLVAIS---TTF 94 (149)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----g~~~~~-~~~~~~~~~~~~~~~~~---~~~ 94 (149)
..+...|.+.+|+|.|.++.++..+. .+...+ .+++|++.||+ ||||.+ ..+....++......+. .+.
T Consensus 6 ~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l 83 (356)
T TIGR00901 6 LVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDL 83 (356)
T ss_pred hHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhH
Confidence 44567889999999999999999755 454554 89999999998 888864 56666666665555555 455
Q ss_pred HHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 95 FQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 95 ~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
+.+....++.+.+.+...+...+++.|++|+|+|+++.++...+.++|..++|.
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~ 137 (356)
T TIGR00901 84 PLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGS 137 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHH
Confidence 666677778888888888999999999999999999999999999999888764
No 97
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.55 E-value=2.8e-13 Score=98.23 Aligned_cols=142 Identities=13% Similarity=0.062 Sum_probs=98.6
Q ss_pred HHHHHHHHHHHHHhhhcccccc-hHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHH-HHHHHHHHH
Q 039580 7 TMVLVNLAGIMERADESLLPGV-YKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIA-LGAFLWAAA 84 (149)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~-~~~~~~~~~ 84 (149)
......+..++.........+. .+++.+++|.|+++.|+..+...+...+.+++.+...||+|+||.++ .+.....++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~g~r~~~~~~~~~~~~~~ 95 (393)
T PRK15011 16 TSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGVLA 95 (393)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHH
Confidence 3344455566666666555554 45567889999999999987665544444445444499999988754 555555566
Q ss_pred HHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCch--hhHHHHHHHHhhhhhhcccc
Q 039580 85 TFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNR--GMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r--~~~~~~~~~~~~~g~~igp~ 148 (149)
.....++++++.+.+.+.+.+...+...|....+..++.++++| +...+..+...++|..+||.
T Consensus 96 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~ 161 (393)
T PRK15011 96 CTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPP 161 (393)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhH
Confidence 66677888888877666555555566788888888888766655 34457777788888888875
No 98
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.55 E-value=4e-13 Score=96.28 Aligned_cols=119 Identities=19% Similarity=0.089 Sum_probs=97.1
Q ss_pred hHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhhhHH
Q 039580 29 YKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSRGLNGIGL 108 (149)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 108 (149)
..++.+++|.++.+.++..........++.++.|++.||+|+|+.+..+.....+........++.+.....+.+.|++.
T Consensus 223 ~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 302 (375)
T TIGR00899 223 PLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFI 302 (375)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445778999999998888777777888899999999999999988877665555555556677888888889999998
Q ss_pred HHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 109 AIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
+...+..+.+..|..|+ +++++.++.+...++|..++|.
T Consensus 303 g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~ 341 (375)
T TIGR00899 303 GILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGS 341 (375)
T ss_pred HHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHH
Confidence 88888888888998865 5679999999888888888875
No 99
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.54 E-value=2.5e-13 Score=101.16 Aligned_cols=128 Identities=11% Similarity=-0.089 Sum_probs=92.9
Q ss_pred hhhcccccchHHHH-hhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHH---HHHhhhhH
Q 039580 20 ADESLLPGVYKEVG-AALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFL---VAISTTFF 95 (149)
Q Consensus 20 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~---~~~~~~~~ 95 (149)
..++....+.|.+. +++|.+..+..+......++..++.++.|+++||+|||+.+..+.....+.... ...+++..
T Consensus 264 ~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (490)
T PRK10642 264 VTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIG 343 (490)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 34444455566654 667888888888888888999999999999999999999988776644433221 22234566
Q ss_pred HHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccc
Q 039580 96 QVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 96 ~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp 147 (149)
.+.+.+++.|++.+...+....+..|.+|++.|+++.++.+....++..++|
T Consensus 344 ~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p 395 (490)
T PRK10642 344 LIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTP 395 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHH
Confidence 7778888888887777777788889999999999999974333344444444
No 100
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.54 E-value=3.3e-13 Score=97.48 Aligned_cols=137 Identities=13% Similarity=0.010 Sum_probs=107.1
Q ss_pred HHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHH
Q 039580 11 VNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAI 90 (149)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~ 90 (149)
.....++............|.+.+|.|.++.+.+...+...++..+..++.+++.||+++|+.+..+....++.......
T Consensus 210 ~~~~~~l~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~ 289 (382)
T PRK11128 210 FLLCVSLLQGSHAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGS 289 (382)
T ss_pred HHHHHHHHHHHhHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHh
Confidence 33333333333333344455566789999999999999999999999999999999999999999988888888777778
Q ss_pred hhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHH-HHhhhhhhcccc
Q 039580 91 STTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQ-LTGNFGSIIGGL 148 (149)
Q Consensus 91 ~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~igp~ 148 (149)
.++++.+++..++.|++.+...+....+..+. +++++++..+..+ .....|..+||.
T Consensus 290 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~ 347 (382)
T PRK11128 290 TTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTV 347 (382)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 88999889999999999999889888888887 6777899898875 444555555553
No 101
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.54 E-value=2.6e-13 Score=98.98 Aligned_cols=124 Identities=15% Similarity=0.111 Sum_probs=105.8
Q ss_pred cccchHHHHhh-cCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHh
Q 039580 25 LPGVYKEVGAA-LCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSRGL 103 (149)
Q Consensus 25 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (149)
...+.|.+.++ +|.++.+.+++.+...++..++.++.+++.||.++++.+..+....+++.+...+.++.+...+..++
T Consensus 242 ~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (417)
T PRK10489 242 VRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLAL 321 (417)
T ss_pred HHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHH
Confidence 34456666655 89999999999999999999999999999999888888888877777777777777787777788888
Q ss_pred hhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 104 NGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 104 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
.|++.+...+...++..|..|+++|++..++++....+|..+||.
T Consensus 322 ~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~ 366 (417)
T PRK10489 322 FGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAA 366 (417)
T ss_pred HHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHH
Confidence 999888888888889999999999999999999888888888875
No 102
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.53 E-value=2.2e-13 Score=100.82 Aligned_cols=134 Identities=13% Similarity=0.138 Sum_probs=107.2
Q ss_pred HHHHHhhhcccccchHHHH-hhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHH---
Q 039580 15 GIMERADESLLPGVYKEVG-AALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAI--- 90 (149)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~--- 90 (149)
.+.............|.+. +.+|.++.+.++......++..++.++.|++.||+|||+.+..+....+++.....+
T Consensus 264 ~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~ 343 (485)
T TIGR00711 264 MSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFT 343 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCC
Confidence 3333333333344556654 558999999999999999999999999999999999999999888888777766552
Q ss_pred -hhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 91 -STTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 91 -~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
..+.+.......+.|++.+...+.......+..|+++|+++.++.+....+|..+|+.
T Consensus 344 ~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~ 402 (485)
T TIGR00711 344 PDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTA 402 (485)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 2345666777888999999888878888888899999999999999999999888764
No 103
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.53 E-value=4e-13 Score=99.54 Aligned_cols=146 Identities=17% Similarity=0.129 Sum_probs=121.0
Q ss_pred cchHHHHHHHHHHHHHhhhcccccc-hHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccch--HHHHHHHHH
Q 039580 4 ETLTMVLVNLAGIMERADESLLPGV-YKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCA--HIIALGAFL 80 (149)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~--~~~~~~~~~ 80 (149)
|.+.+....+++++..-........ ..+..+++|++..+...+.....+..++++.++|++.||+|.| +++......
T Consensus 279 ~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~ 358 (477)
T PF11700_consen 279 KLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLIL 358 (477)
T ss_pred hChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHH
Confidence 3445555556666655555544444 4455678999999999999999999999999999999999999 888888887
Q ss_pred HHHHHHHHHH--------hhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccccC
Q 039580 81 WAAATFLVAI--------STTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGLC 149 (149)
Q Consensus 81 ~~~~~~~~~~--------~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~~ 149 (149)
+.+..+...+ .++.+.+++...+.|+..|..++..-++.+|+.|+++.+..+|++.+.....+.+||++
T Consensus 359 ~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll 435 (477)
T PF11700_consen 359 WIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLL 435 (477)
T ss_pred HHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHH
Confidence 7555554444 57888999999999999999999999999999999999999999999999999999863
No 104
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.53 E-value=4.5e-13 Score=98.98 Aligned_cols=141 Identities=9% Similarity=0.016 Sum_probs=108.7
Q ss_pred HHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhc--cchHHHHHH--HHHHHHH
Q 039580 9 VLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHH--NCAHIIALG--AFLWAAA 84 (149)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--g~~~~~~~~--~~~~~~~ 84 (149)
+......+...........+.|.+.++.|.+..+.++..+...++..+++++.|++.||. ++|+..... ....++.
T Consensus 244 ~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~ 323 (455)
T TIGR00892 244 LVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLT 323 (455)
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHH
Confidence 333344444444444445566777778899999999999999999999999999999974 344433333 3333344
Q ss_pred HHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccccC
Q 039580 85 TFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGLC 149 (149)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~~ 149 (149)
.+.....++++.+++.+.+.|++.+...+...+.+.|.+|++++++..++.+...++|..+||.+
T Consensus 324 ~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i 388 (455)
T TIGR00892 324 HLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPL 388 (455)
T ss_pred HHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccc
Confidence 44555677888888899999999999999999999999999999999999999999999999863
No 105
>PRK12382 putative transporter; Provisional
Probab=99.53 E-value=1.9e-13 Score=98.88 Aligned_cols=122 Identities=12% Similarity=0.049 Sum_probs=101.5
Q ss_pred cccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhh
Q 039580 25 LPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSRGLN 104 (149)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (149)
...+.|.+.++.+.+ +.+.....+.++..+++++.|++.||+|+||.+..+....+++.....+.++.+...+...+.
T Consensus 235 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 312 (392)
T PRK12382 235 IGTFVSLYFASKGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALT 312 (392)
T ss_pred HHHHHHHHHHhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 344455555666654 345666777888889999999999999999999988888888877777777888888889999
Q ss_pred hhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 105 GIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 105 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
|++.+...+...+...|..|+|+|++..++.+....+|..+||.
T Consensus 313 g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~ 356 (392)
T PRK12382 313 GAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGP 356 (392)
T ss_pred HHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888888899999999999999999999999999888874
No 106
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.53 E-value=1.4e-13 Score=99.41 Aligned_cols=136 Identities=15% Similarity=0.027 Sum_probs=106.9
Q ss_pred HHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHH-HHHHH-HHH
Q 039580 11 VNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFL-WAAAT-FLV 88 (149)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~-~~~~~-~~~ 88 (149)
+.+.++..........++.|.+.+++|.|..+.+++.+.+.+...+.+++.|.++||+||++........ ..+.. ...
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~ 88 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFS 88 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH
Confidence 4455666666677778888999999999999999999999999999999999999999985443222211 11111 233
Q ss_pred HHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 89 AISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 89 ~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
..+++++.+++.|.+++.+.+...|...++..+. +++|++..+......++|.+++|.
T Consensus 89 ~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~ 146 (382)
T TIGR00902 89 AGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSA 146 (382)
T ss_pred HhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHH
Confidence 3578899999999999998888888888887664 578899999998888999888875
No 107
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.53 E-value=3.6e-13 Score=100.40 Aligned_cols=139 Identities=12% Similarity=0.019 Sum_probs=111.0
Q ss_pred HHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhc-----cchHH-HHHHHHHH
Q 039580 8 MVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHH-----NCAHI-IALGAFLW 81 (149)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----g~~~~-~~~~~~~~ 81 (149)
...+....+.............|.+.++.|.|.++.+.. +.....+ +..+++|.++||+ ||||. +..+.+..
T Consensus 14 ~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~ 91 (491)
T PRK11010 14 SAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLL 91 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHH
Confidence 334455566677777777788899999999999998886 3333333 5889999999999 99885 55666666
Q ss_pred HHHHHHHHHh---hhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 82 AAATFLVAIS---TTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 82 ~~~~~~~~~~---~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
+++....++. ++++.+.+.+.+.+++.+...+...++..|++|+|+|+++.++...++.+|..+++.
T Consensus 92 ~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~ 161 (491)
T PRK11010 92 LVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGG 161 (491)
T ss_pred HHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHH
Confidence 6666666554 467788889999999999999999999999999999999999999999999888763
No 108
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.52 E-value=5.5e-13 Score=98.75 Aligned_cols=141 Identities=13% Similarity=-0.074 Sum_probs=98.7
Q ss_pred HHHHHHHHHHHHhhhcccccchHHH-HhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHH
Q 039580 8 MVLVNLAGIMERADESLLPGVYKEV-GAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATF 86 (149)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 86 (149)
++...+..++..........+.|.+ .+++|.|..+.++......++..++.++.|+++||+++|+..........+...
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~ 339 (467)
T PRK09556 260 IWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFT 339 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHH
Confidence 4444445555444444455566655 567899999999999999999999999999999999998877655444333322
Q ss_pred --HHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhh-hhhcccc
Q 039580 87 --LVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNF-GSIIGGL 148 (149)
Q Consensus 87 --~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~igp~ 148 (149)
.....++.+...+.+++.|+..............|.+|+++|+++.|+.+...++ |..++|.
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~ 404 (467)
T PRK09556 340 LGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKV 404 (467)
T ss_pred HHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhh
Confidence 2223345555667777777654434433446677999999999999999888786 6566654
No 109
>PRK10504 putative transporter; Provisional
Probab=99.52 E-value=4.1e-13 Score=99.34 Aligned_cols=140 Identities=11% Similarity=0.067 Sum_probs=109.4
Q ss_pred HHHHHHHHHHHhhhcccccchHHHHh-hcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHH
Q 039580 9 VLVNLAGIMERADESLLPGVYKEVGA-ALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFL 87 (149)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~ 87 (149)
.......++............|++.+ .+|.++.+.++......++..+..++.+++.||+|||+++..+....++....
T Consensus 264 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~ 343 (471)
T PRK10504 264 SLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLL 343 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHH
Confidence 33444444444444455566777765 58999999999999899988899999999999999999998888877776555
Q ss_pred HHHh---hhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 88 VAIS---TTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 88 ~~~~---~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
..+. ++.+.+....++.|++.+...+..+....+..|+++++++.++.+....+|..+||.
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~ 407 (471)
T PRK10504 344 FMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVT 407 (471)
T ss_pred HHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHH
Confidence 4442 333444556777888888888999999999999999999999999999999888764
No 110
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.51 E-value=5e-13 Score=96.89 Aligned_cols=122 Identities=15% Similarity=0.110 Sum_probs=99.8
Q ss_pred cccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhh
Q 039580 25 LPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSRGLN 104 (149)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (149)
...+.|.+.++.|. ++.++..+.+.++..++.++.|++.||+++|+.+..+....+++.......++.+...+.+++.
T Consensus 235 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 312 (399)
T PRK05122 235 IATFITLYYAARGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALT 312 (399)
T ss_pred HHHHHHHHHHHccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 33445555555555 3456666778888899999999999999999998888888777777777777888888889999
Q ss_pred hhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 105 GIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 105 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
|++.+..++.......|..|+++|+++.++++....+|..++|.
T Consensus 313 G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~ 356 (399)
T PRK05122 313 GFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGP 356 (399)
T ss_pred HHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888888888889999999999999999988888877653
No 111
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.51 E-value=5e-13 Score=99.69 Aligned_cols=123 Identities=18% Similarity=0.081 Sum_probs=103.3
Q ss_pred ccchHHH-HhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHH---hhhhHHHHHHH
Q 039580 26 PGVYKEV-GAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAI---STTFFQVAVSR 101 (149)
Q Consensus 26 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 101 (149)
....|.+ ++.+|.|+.+.+.......++..++.++.|++.||+|+|+.+..+..+..++...... .++.+......
T Consensus 279 ~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~ 358 (495)
T PRK14995 279 ELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLM 358 (495)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHH
Confidence 3445554 5568999999999999999999999999999999999999988888877776655433 24556667788
Q ss_pred HhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 102 GLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 102 ~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
++.|++.+...+.......+..|+++++.+.+..++..++|..+|+.
T Consensus 359 ~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~a 405 (495)
T PRK14995 359 ALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIA 405 (495)
T ss_pred HHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHH
Confidence 89999999999888999999999999999999999999999888763
No 112
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.50 E-value=6.3e-13 Score=96.40 Aligned_cols=124 Identities=15% Similarity=0.145 Sum_probs=99.5
Q ss_pred cccchHHHHhhcCCCcc----hhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHH
Q 039580 25 LPGVYKEVGAALCTDPT----GLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVS 100 (149)
Q Consensus 25 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (149)
..+..+.+.++.+.+.. ..+.+.....++..++.+..|++.||+|||+.+..+.....+..+...+.++.+.+.+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (408)
T PRK09874 238 IAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGIL 317 (408)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 34445555554433322 23555566778888899999999999999999998888777777666667788888889
Q ss_pred HHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 101 RGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 101 ~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
+++.|++.+...+...+.+.+..|+++|++..+..+....+|..+||.
T Consensus 318 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~ 365 (408)
T PRK09874 318 RFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPL 365 (408)
T ss_pred HHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHH
Confidence 999999999999999999999999999999999999989999988875
No 113
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.50 E-value=4.1e-13 Score=98.08 Aligned_cols=113 Identities=11% Similarity=0.143 Sum_probs=97.2
Q ss_pred cCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhhhHHHHHHHhH
Q 039580 36 LCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSRGLNGIGLAIVTLAI 115 (149)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~ 115 (149)
.+.+..+.+.+.+...+...++.++.|++.||+|+|+.+..+..+.++......+.++.+.+++.+.+.|++.+...+..
T Consensus 257 ~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 336 (420)
T PRK09528 257 PEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGV 336 (420)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 35666788999999999999999999999999999999999888888888878888899988899999999988888888
Q ss_pred HHHHhhhcccCchhhHHHH-HHHHhhhhhhcccc
Q 039580 116 QSLVADSTDESNRGMAFGW-LQLTGNFGSIIGGL 148 (149)
Q Consensus 116 ~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~igp~ 148 (149)
..++.|.+|++.|++..+. ++....+|..++|.
T Consensus 337 ~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~ 370 (420)
T PRK09528 337 FKYITLNFDVRLSATIYLVGFQFAKQLGAVFLST 370 (420)
T ss_pred HHHHHHHcCccceeeeeeehHHHHHHHHHHHHHH
Confidence 8999999999999987655 56667777777764
No 114
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.50 E-value=7.2e-13 Score=95.68 Aligned_cols=119 Identities=9% Similarity=-0.025 Sum_probs=96.6
Q ss_pred cchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhhh
Q 039580 27 GVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSRGLNGI 106 (149)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 106 (149)
.+.|.+.++.|.++++.+...+...++..+++.+.|++.||+|+|+.+..+.....++..... + .........+.|.
T Consensus 221 ~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~g~ 297 (381)
T PRK03633 221 GLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFILGA 297 (381)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHHHH
Confidence 456777778899999999999999999999999999999999999998888777766654432 2 2233446677788
Q ss_pred HHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 107 GLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
+.....|..++...|..|+++++...+..+..+++|..+||.
T Consensus 298 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~ 339 (381)
T PRK03633 298 AGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPS 339 (381)
T ss_pred HHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777788999999999999888888888888888899888875
No 115
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.50 E-value=1.3e-12 Score=95.07 Aligned_cols=138 Identities=11% Similarity=0.023 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHH-HHHHHHHHHHHH
Q 039580 9 VLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIA-LGAFLWAAATFL 87 (149)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~-~~~~~~~~~~~~ 87 (149)
+...+..++..........+.|.+.+++|.++.+.+.......++..++.+..|+++||++||+... .+.....+....
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~ 304 (402)
T TIGR00897 225 LLGGMVRIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLA 304 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHH
Confidence 3434444444455555566778888889999999999999999999999999999999999888764 233333333222
Q ss_pred HHH-----hhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 88 VAI-----STTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 88 ~~~-----~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
... .++.+...+...+.|++.+...+ ......|. +|++|+++.|+.+....+|..++|.
T Consensus 305 l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~-~~~~~g~~~g~~~~~~~lg~~~gp~ 368 (402)
T TIGR00897 305 LYYIPQHFGHSFAVALIIAIALGIFLAGYVP-LAAVFPTL-APKHKGAAMSVLNLSAGLSAFLAPA 368 (402)
T ss_pred HHHHHHccCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhh-CcchhHHHHHHHHHHHHHHHHHHHH
Confidence 221 23566667778888888776655 34556665 4678999999999999999988885
No 116
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.50 E-value=1.6e-13 Score=102.29 Aligned_cols=139 Identities=15% Similarity=0.213 Sum_probs=120.8
Q ss_pred HHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHH
Q 039580 8 MVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFL 87 (149)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~ 87 (149)
....++.+............+.+.+.++++-+.++.+|+.++......+..|+.+.+.||+|.|++.+.|.++..++.++
T Consensus 48 ~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~l 127 (509)
T KOG2504|consen 48 VFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLL 127 (509)
T ss_pred eHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHH
Confidence 33444455555555556667889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhHHHHHHH-HhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccc
Q 039580 88 VAISTTFFQVAVSR-GLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 88 ~~~~~~~~~~~~~~-~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp 147 (149)
..++++.|++++.. ++.|+|.+..+......+..+| +|+|+.+.|+...+.++|.++-|
T Consensus 128 ssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~ 187 (509)
T KOG2504|consen 128 SSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFP 187 (509)
T ss_pred HHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHH
Confidence 99999999988775 7789999999998888889888 79999999999999988887655
No 117
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.49 E-value=2.9e-13 Score=97.80 Aligned_cols=131 Identities=15% Similarity=0.100 Sum_probs=100.8
Q ss_pred HHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccch----HHHHHHHHHHHHHHHHHH
Q 039580 14 AGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCA----HIIALGAFLWAAATFLVA 89 (149)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~----~~~~~~~~~~~~~~~~~~ 89 (149)
.++..........++.|.+.+|+|.|.++.|+..+.+.+...+++++.|++.||+||| +.+....... ......
T Consensus 12 ~~~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~ 89 (382)
T PRK11128 12 SYFGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWF 89 (382)
T ss_pred HHHHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHH
Confidence 3555556667778888888899999999999999999999999999999999999984 3332222211 122233
Q ss_pred HhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 90 ISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 90 ~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
..++++.+.+.|++.|++.+...|...+...++ +++|++..+..+...++|..+||.
T Consensus 90 ~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~ 146 (382)
T PRK11128 90 GAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSA 146 (382)
T ss_pred hcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHH
Confidence 457899999999999999888888888887776 456777777777777788777764
No 118
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.49 E-value=8.6e-16 Score=112.86 Aligned_cols=135 Identities=17% Similarity=0.184 Sum_probs=112.3
Q ss_pred HHHHHHhhhcccccchHHHH--hhcCCC---------cchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHH
Q 039580 14 AGIMERADESLLPGVYKEVG--AALCTD---------PTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWA 82 (149)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~--~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~ 82 (149)
+.+....+....+...+... .+.+.+ +.+.++..+...++..+++++.|+++||+|||+.+..+..+..
T Consensus 8 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~ 87 (451)
T PF00083_consen 8 GGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMI 87 (451)
T ss_pred HHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhcccccccccccccccccccccccccccc
Confidence 34556666655554443332 222221 2246788899999999999999999999999999999999999
Q ss_pred HHHHHHHHhh---hhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 83 AATFLVAIST---TFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 83 ~~~~~~~~~~---~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
++.++..+++ +++.+.++|++.|++.|...+....++.|..|+++|++..++.+..+.+|..++..
T Consensus 88 i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~ 156 (451)
T PF00083_consen 88 IGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASL 156 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999 99999999999999999999999999999999999999999999999888877654
No 119
>PRK03545 putative arabinose transporter; Provisional
Probab=99.49 E-value=1.4e-12 Score=94.35 Aligned_cols=121 Identities=17% Similarity=0.096 Sum_probs=93.2
Q ss_pred ccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHH-HHHHhhhhHHHHHHHHhh
Q 039580 26 PGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATF-LVAISTTFFQVAVSRGLN 104 (149)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 104 (149)
....|.+.++.|.|+.+.++..+...++..++.++.+++.||+++|+.. .+......+.. .....++.+.+.+..++.
T Consensus 226 ~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~ 304 (390)
T PRK03545 226 SYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAANSEWHLSVLSIFW 304 (390)
T ss_pred HHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHhchHHHHHHHHHHH
Confidence 3345555666899999999999999999999999999999999987654 44444444333 334566777788888899
Q ss_pred hhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 105 GIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 105 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
|++.+...+..+..+.+..| ++|+++.+.++....+|..+||.
T Consensus 305 g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~ 347 (390)
T PRK03545 305 GIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGAL 347 (390)
T ss_pred HHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHH
Confidence 99887777777888888765 68899999988888888877764
No 120
>PRK03699 putative transporter; Provisional
Probab=99.49 E-value=1.3e-12 Score=94.70 Aligned_cols=139 Identities=10% Similarity=0.038 Sum_probs=105.8
Q ss_pred HHHHHHHHHHHhhhcccccchHHHH-hhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHH
Q 039580 9 VLVNLAGIMERADESLLPGVYKEVG-AALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFL 87 (149)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~ 87 (149)
....+..++..........+.|.+. +++|.|+.+.+...+.+.++..++.++.|++.||+++|+.+........+....
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~ 287 (394)
T PRK03699 208 LFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYL 287 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHH
Confidence 3334444444444444445566655 678999999999999999999999999999999999999988777666666555
Q ss_pred HHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 88 VAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 88 ~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
....++.+...+..++.|++.+..++...+...|..| +++++..+.......+|..++|.
T Consensus 288 ~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~ 347 (394)
T PRK03699 288 FVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFV 347 (394)
T ss_pred HHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHH
Confidence 5566777666777788888888888888888888774 55677888888888888888875
No 121
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.49 E-value=5.3e-13 Score=96.77 Aligned_cols=140 Identities=11% Similarity=-0.015 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHHHhhhcccccchHHH-HhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHH
Q 039580 7 TMVLVNLAGIMERADESLLPGVYKEV-GAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAAT 85 (149)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~ 85 (149)
.++.....+++.........++.|.+ .+++|.|+.+.+++.+.+.++..+++++.|+++||+|||+.+..+....++..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~ 82 (396)
T TIGR00882 3 NFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLF 82 (396)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 34555556666666666666665554 56799999999999999999999999999999999999999987766655433
Q ss_pred HHH---HHh-----hhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 86 FLV---AIS-----TTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 86 ~~~---~~~-----~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
... ... +......+.+++.|++.+...+....+..|..+ ++++..+......++|..+||.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~ 151 (396)
T TIGR00882 83 APFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCAS 151 (396)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHH
Confidence 221 111 123334566777888877777777777766532 3334445555555566555553
No 122
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.49 E-value=3.3e-13 Score=95.68 Aligned_cols=132 Identities=23% Similarity=0.197 Sum_probs=108.2
Q ss_pred HHHHhhhcccccchHHH-HhhcCCC-cchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHH---
Q 039580 16 IMERADESLLPGVYKEV-GAALCTD-PTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAI--- 90 (149)
Q Consensus 16 ~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~--- 90 (149)
+.............|.+ .+++|.+ ..+.+.......+...++.++.|++.||+++|+..........+.......
T Consensus 216 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (352)
T PF07690_consen 216 FLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPF 295 (352)
T ss_dssp HHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHH
T ss_pred hHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333444456667776 7888988 789999999999999999999999999999988877777666666555433
Q ss_pred hhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccc
Q 039580 91 STTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 91 ~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp 147 (149)
.++....+...++.|++.+...+...++..|..|+|+|++..|+.+...++|..+||
T Consensus 296 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 296 SSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 335566777888899999999999999999999999999999999999999999987
No 123
>PRK09952 shikimate transporter; Provisional
Probab=99.48 E-value=1.6e-12 Score=95.59 Aligned_cols=130 Identities=15% Similarity=0.093 Sum_probs=90.4
Q ss_pred HhhhcccccchHHH-HhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHH---h-hh
Q 039580 19 RADESLLPGVYKEV-GAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAI---S-TT 93 (149)
Q Consensus 19 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~---~-~~ 93 (149)
....+....+.|.+ .+++|.++.+...+.....+...++.++.|+++||+|||+.+..+.....++...... . ++
T Consensus 263 ~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (438)
T PRK09952 263 LLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSI 342 (438)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCCh
Confidence 33334344444544 5678888876666666667777888999999999999999988876665544332222 2 23
Q ss_pred hHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHH-HHhhhhhhcccc
Q 039580 94 FFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQ-LTGNFGSIIGGL 148 (149)
Q Consensus 94 ~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~igp~ 148 (149)
.+...+...+.+++.+...+..+++..|.+|+++|+++.++.+ .+..+|..++|.
T Consensus 343 ~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~ 398 (438)
T PRK09952 343 FWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPF 398 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHH
Confidence 3444455666778888888888999999999999999988843 444467666664
No 124
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.46 E-value=2.7e-12 Score=91.75 Aligned_cols=134 Identities=15% Similarity=0.017 Sum_probs=97.7
Q ss_pred HHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhc-cchHHHHHHHHHHHHHHHHHHHhh
Q 039580 14 AGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHH-NCAHIIALGAFLWAAATFLVAIST 92 (149)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~ 92 (149)
...+..........+.|.+.++.|.|+.+.+...+...++..++.++.|++.||+ +||+.+..+..+.+++.....+.+
T Consensus 205 ~~~~~~~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (355)
T TIGR00896 205 FFGLQSGLYYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAP 284 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhh
Confidence 3333333344445567777778899999999999999999999999999999999 566676777777777666555544
Q ss_pred hhHHHHHHHHhhhhHHHHHHHhHHHHHhhhc-ccCchhhHHHHHHHHhhhhhhcccc
Q 039580 93 TFFQVAVSRGLNGIGLAIVTLAIQSLVADST-DESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 93 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
+..... ...+.|++.+...+...+.+.+.. +++++++..++.+....++..++|.
T Consensus 285 ~~~~~~-~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~ 340 (355)
T TIGR00896 285 MHGLWA-WALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPL 340 (355)
T ss_pred hhHHHH-HHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333222 456789999888888777766554 4567788888887777777777764
No 125
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.46 E-value=1.8e-12 Score=92.89 Aligned_cols=140 Identities=14% Similarity=0.109 Sum_probs=94.9
Q ss_pred HHHHHHHHHHHHhhhcccccchHHH-HhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchH--HHHHHH------
Q 039580 8 MVLVNLAGIMERADESLLPGVYKEV-GAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAH--IIALGA------ 78 (149)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~--~~~~~~------ 78 (149)
+....+..+.............|.+ .+++|.++.+.++......++..++.++.|++.||++||+ ......
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 296 (399)
T TIGR00893 217 VWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAG 296 (399)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHH
Confidence 3444444555555555555555555 5668989999999999999999999999999999999986 111111
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 79 FLWAAATFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
....+........++.+.......+.+.+.+ ..+...++..|..|+++|++..++.+....+|..++|.
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~ 365 (399)
T TIGR00893 297 LVLSLLMFATNYVNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPI 365 (399)
T ss_pred HHHHHHHHHhccchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhH
Confidence 1111111111112234444433444444444 78889999999999999999999999999999988875
No 126
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.45 E-value=2e-12 Score=95.58 Aligned_cols=136 Identities=15% Similarity=0.096 Sum_probs=101.9
Q ss_pred HHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhh----hccchHHHHHH-HHHHHHHHHH
Q 039580 13 LAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSV----HHNCAHIIALG-AFLWAAATFL 87 (149)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~g~~~~~~~~-~~~~~~~~~~ 87 (149)
...+.....+.......+.+.+++|.++.+.+++.....+...+.+|+.|+++| |+||||.++.+ .....++..+
T Consensus 11 ~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~l 90 (477)
T TIGR01301 11 SVAAGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVIL 90 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence 333334444555566666688999999999999999999999999999999999 59999998875 5555556566
Q ss_pred HHHhhhhH-----------------HHHHHHHhhhhHHHHHHHhHHHHHhhhcccCch--hhHHHHHHHHhhhhhhcccc
Q 039580 88 VAISTTFF-----------------QVAVSRGLNGIGLAIVTLAIQSLVADSTDESNR--GMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 88 ~~~~~~~~-----------------~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r--~~~~~~~~~~~~~g~~igp~ 148 (149)
..++++.. ...++..+..++....++...+++.|..|+++| +.+.++.+...++|..+|+.
T Consensus 91 l~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~ 170 (477)
T TIGR01301 91 IGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYA 170 (477)
T ss_pred HHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66655432 223333344457777888889999999998865 57888888888888887764
No 127
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.45 E-value=2.4e-12 Score=96.97 Aligned_cols=118 Identities=12% Similarity=0.178 Sum_probs=101.0
Q ss_pred cccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Q 039580 23 SLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSRG 102 (149)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (149)
......++++.+++|.+ +...|+.+.+.++.++..++.|+++|.+|||..++.+.++..++.+..+.++|...++++..
T Consensus 61 ~~~a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~ 139 (599)
T PF06609_consen 61 VLPASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMV 139 (599)
T ss_pred hccHHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHH
Confidence 34455678888999854 67789999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhh
Q 039580 103 LNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFG 142 (149)
Q Consensus 103 ~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 142 (149)
+.|+|.|.... ....++|..|.|.|..+.++.....-..
T Consensus 140 l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~ 178 (599)
T PF06609_consen 140 LYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIIT 178 (599)
T ss_pred HHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhh
Confidence 99999776654 4566899999999988887765544443
No 128
>PRK15075 citrate-proton symporter; Provisional
Probab=99.45 E-value=2.1e-12 Score=94.82 Aligned_cols=126 Identities=11% Similarity=0.001 Sum_probs=87.3
Q ss_pred hcccccchHHHHh-hcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHH-HH-H--HhhhhHH
Q 039580 22 ESLLPGVYKEVGA-ALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATF-LV-A--ISTTFFQ 96 (149)
Q Consensus 22 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~-~~-~--~~~~~~~ 96 (149)
......+.|.+.+ ++|.+..+.++....+.++..++.++.|+++||+|||+....+.....+... .. . ..++...
T Consensus 254 ~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (434)
T PRK15075 254 FYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFAR 333 (434)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHH
Confidence 3344555666654 4899999989888889999999999999999999999988776544332221 11 1 1223333
Q ss_pred HHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHH-HHhhhhhhccc
Q 039580 97 VAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQ-LTGNFGSIIGG 147 (149)
Q Consensus 97 ~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~igp 147 (149)
......+.+++.+...+....+..|.+|+++|+++.++.+ .+..++..++|
T Consensus 334 ~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p 385 (434)
T PRK15075 334 MLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTP 385 (434)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHH
Confidence 4444556667777777777788999999999999999853 33333344454
No 129
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.45 E-value=1.1e-12 Score=97.50 Aligned_cols=123 Identities=10% Similarity=0.111 Sum_probs=92.9
Q ss_pred ccchHHHH-hhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHh--hhhHHHHHHHH
Q 039580 26 PGVYKEVG-AALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAIS--TTFFQVAVSRG 102 (149)
Q Consensus 26 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 102 (149)
..+.|.+. +++|.+..+.++..+...++..++.++.|+++||+|+|+.+..+.....+..+..... ++.+......+
T Consensus 295 ~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (496)
T PRK03893 295 QALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLF 374 (496)
T ss_pred HHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHH
Confidence 34566665 6889999999999999999999999999999999999999887776655554433322 23333434444
Q ss_pred hhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 103 LNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 103 ~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
+.+.......+....++.|.+|+++|++.+++.+....+|..+||.
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~ 420 (496)
T PRK03893 375 FQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPI 420 (496)
T ss_pred HHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHH
Confidence 4444333345667778899999999999999998888888888875
No 130
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.45 E-value=2.4e-12 Score=94.00 Aligned_cols=124 Identities=10% Similarity=-0.019 Sum_probs=89.8
Q ss_pred cccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhh
Q 039580 25 LPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSRGLN 104 (149)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (149)
.....|.+.++.|.++.+.+...+...++..++.++.|++.||++||+.+..+.....+........++.........+.
T Consensus 250 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (426)
T PRK12307 250 IFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLF 329 (426)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHH
Confidence 34456777777899999999999999999999999999999999999998888776655544333222211122222233
Q ss_pred hhH--HHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 105 GIG--LAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 105 G~~--~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
|.+ .....+..+.++.|.+|+++|+++.|+......+|..++|.
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~ 375 (426)
T PRK12307 330 GLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSM 375 (426)
T ss_pred HHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHH
Confidence 332 22234456677899999999999999998888888888875
No 131
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.43 E-value=1.6e-12 Score=95.05 Aligned_cols=143 Identities=12% Similarity=0.016 Sum_probs=87.9
Q ss_pred cchHHHHHHHHHHHHHhhhcccccchHH-HHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHH
Q 039580 4 ETLTMVLVNLAGIMERADESLLPGVYKE-VGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWA 82 (149)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~ 82 (149)
+++.++...+.+++.........++.|. +.+++|.|+.+.+++.+...++..+.+++.|+++||+|||+.+..+....+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~ 87 (420)
T PRK09528 8 KNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLL 87 (420)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHH
Confidence 3445555556666666666555555554 456699999999999999999999999999999999999999887665554
Q ss_pred HHHHHHH---Hhh-----hhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 83 AATFLVA---IST-----TFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 83 ~~~~~~~---~~~-----~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
+...... ..+ .........+..|.+.....+....+..+ . ++++++..+..+...++|..++|.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~ 159 (420)
T PRK09528 88 VLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAF 159 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHH
Confidence 4332111 111 11111222333333322233333333322 2 345666667666666777766654
No 132
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.43 E-value=1.5e-12 Score=93.26 Aligned_cols=142 Identities=18% Similarity=0.200 Sum_probs=119.7
Q ss_pred HHHHHHHHHHHHHhhhcccccchHHH-HhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHH
Q 039580 7 TMVLVNLAGIMERADESLLPGVYKEV-GAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAAT 85 (149)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~ 85 (149)
.+....++.++..-........-..+ ..++|++..|...+.....+..++++.+.|++.||+|.|+++..+.+...+.+
T Consensus 253 ~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~ 332 (438)
T COG2270 253 NLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAA 332 (438)
T ss_pred chHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHH
Confidence 33444444444444444444444445 45899999999999999999999999999999999999999999999988888
Q ss_pred HHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 86 FLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
+...+......++++-.+.|...|..+...-++..+..|+++-++.+|++++....++.+||+
T Consensus 333 ~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~ 395 (438)
T COG2270 333 LYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPF 395 (438)
T ss_pred HHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHH
Confidence 777777777788888899999999999999999999999999999999999999999999986
No 133
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.43 E-value=3.4e-12 Score=93.66 Aligned_cols=137 Identities=13% Similarity=-0.059 Sum_probs=98.4
Q ss_pred HHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHH-
Q 039580 12 NLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAI- 90 (149)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~- 90 (149)
.+..+.............|.+.+++|.+..+.++......++..++.++.|++.||+|||+.+..+....+++.....+
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (481)
T TIGR00879 290 VLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGIL 369 (481)
T ss_pred HHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333444556678888899999988888889999999999999999999999999998887777776655542
Q ss_pred ----hhh-----hHHHHHHHHhhhhHHH-HHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 91 ----STT-----FFQVAVSRGLNGIGLA-IVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 91 ----~~~-----~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
.++ .+.......+.+.+.+ ...+....+..|.+|+++|+++.++.+...++|..++|.
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~ 437 (481)
T TIGR00879 370 GASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGF 437 (481)
T ss_pred hhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 2222222223222222 234566677799999999999999999999999988874
No 134
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.42 E-value=1e-13 Score=100.09 Aligned_cols=140 Identities=14% Similarity=0.142 Sum_probs=112.2
Q ss_pred HHHHHHHHHHHHhhhcccccchHHHHhhc-C-------CCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHH
Q 039580 8 MVLVNLAGIMERADESLLPGVYKEVGAAL-C-------TDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAF 79 (149)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~ 79 (149)
+.....+.+....+....+...|-+...+ | +++...+.+..+..++.+++++++|++.||+|||+++...++
T Consensus 43 i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~li 122 (538)
T KOG0252|consen 43 IIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELI 122 (538)
T ss_pred HHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHH
Confidence 34445556666777777777777665443 2 455667888899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhh-------hhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccc
Q 039580 80 LWAAATFLVAIST-------TFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 80 ~~~~~~~~~~~~~-------~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp 147 (149)
++++++++.+++. -.+++.+.|++.|+|.|+-+|...+..+|...+++||...+..-...++|...|.
T Consensus 123 ImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ 197 (538)
T KOG0252|consen 123 IMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGG 197 (538)
T ss_pred HHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhcc
Confidence 9999998666532 2467888999999999999999999999999999999988877666666655543
No 135
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.42 E-value=4.6e-12 Score=92.74 Aligned_cols=140 Identities=19% Similarity=0.195 Sum_probs=103.6
Q ss_pred HHHHHHHHHHHHhhhcccccchHHHHhh-cCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHH
Q 039580 8 MVLVNLAGIMERADESLLPGVYKEVGAA-LCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATF 86 (149)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 86 (149)
+....+..++............+++.++ ++ ++.+.++......++..++.++.++++||+|+|+.+..+..+.+++..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~ 302 (437)
T TIGR00792 224 LLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYL 302 (437)
T ss_pred HHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 3334444444444444434444554433 34 566677788888999999999999999999999999998888777766
Q ss_pred HHHHh-hhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcc-------cCchhhHHHHHHHHhhhhhhcccc
Q 039580 87 LVAIS-TTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTD-------ESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 87 ~~~~~-~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-------~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
...+. ++.+.+.+...+.|++.+...+...+.+.|..| ++++|+..|+.+....+|..+++.
T Consensus 303 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~ 372 (437)
T TIGR00792 303 IFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGF 372 (437)
T ss_pred HHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHH
Confidence 55554 456667777888999999889989999888865 456799999999999998888764
No 136
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.42 E-value=1.1e-11 Score=90.16 Aligned_cols=123 Identities=18% Similarity=0.185 Sum_probs=97.3
Q ss_pred cchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhh-hccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhh
Q 039580 27 GVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSV-HHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSRGLNG 105 (149)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 105 (149)
...|.+.++.+.++.+.++..+...+.......+.+++.| |++.++.+..+....+++.......++.+...+...+.+
T Consensus 229 ~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~ 308 (400)
T PRK11646 229 LMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFY 308 (400)
T ss_pred HhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 4567776666557788888888777766666555566665 466666677777777777777777788777777778888
Q ss_pred hHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccccC
Q 039580 106 IGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGLC 149 (149)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~~ 149 (149)
++.+...|..+++..+..|+++|+++.|+.+....+|..+||.+
T Consensus 309 ~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l 352 (400)
T PRK11646 309 IGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIG 352 (400)
T ss_pred HHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccc
Confidence 98888889999999999999999999999999999999999864
No 137
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.41 E-value=6e-12 Score=92.12 Aligned_cols=109 Identities=12% Similarity=-0.026 Sum_probs=88.0
Q ss_pred HHHHHHHHHhhhccc-ccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccc-hHHHHHHHHHHHHHHHHH
Q 039580 11 VNLAGIMERADESLL-PGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNC-AHIIALGAFLWAAATFLV 88 (149)
Q Consensus 11 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~-~~~~~~~~~~~~~~~~~~ 88 (149)
+.+.+++....+... +++.+++.+++|.+.+|.|++.+.+.++..+++++.|+++||+|+ |+.+..+.....+.....
T Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~ 86 (418)
T TIGR00889 7 LKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFA 86 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 445566666666655 556667778899999999999999999999999999999999965 778888787777777777
Q ss_pred HHhhhhHHHHHHHHhhhhHHHHHHHhHHHHH
Q 039580 89 AISTTFFQVAVSRGLNGIGLAIVTLAIQSLV 119 (149)
Q Consensus 89 ~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~ 119 (149)
.+.++++.+.+.+.+.|++.+...+..+++.
T Consensus 87 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~ 117 (418)
T TIGR00889 87 AQVTTPAGMFPVLLANSLAYMPTIALTNSIS 117 (418)
T ss_pred HHhcCHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 7888899999999999998776666666553
No 138
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.40 E-value=8.1e-12 Score=90.70 Aligned_cols=137 Identities=12% Similarity=0.010 Sum_probs=100.0
Q ss_pred HHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHH
Q 039580 10 LVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVA 89 (149)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~ 89 (149)
...+........+.....+.|.+.++.|.+..+.+...+.+.++..++.+..+++.||+++|+....+..+..++.....
T Consensus 209 ~l~~~~~~~~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~ 288 (393)
T PRK09705 209 TLGVYFGLINGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFI 288 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHH
Confidence 33334444444444455566666677899999999999999999999999999999999999998888777666655443
Q ss_pred H-hhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcc-cCchhhHHHHHHHHhhhhhhcccc
Q 039580 90 I-STTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTD-ESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 90 ~-~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
. .++.... ...+.|++.+...+.......+..+ +++|++..++.+....++..++|.
T Consensus 289 ~~~~~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~ 347 (393)
T PRK09705 289 WLPLQLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPW 347 (393)
T ss_pred HccchHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 2222222 2345677777777877777777774 678999999988888888877774
No 139
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.40 E-value=1.2e-11 Score=92.73 Aligned_cols=122 Identities=21% Similarity=0.218 Sum_probs=109.2
Q ss_pred ccchHHHH-hhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhh
Q 039580 26 PGVYKEVG-AALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSRGLN 104 (149)
Q Consensus 26 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (149)
....|.+. +++|.++..+|++.+...++..++..+.+++.+|+++++.+..+.+..+++.+..++.++.+...+..++.
T Consensus 238 ~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~ 317 (524)
T PF05977_consen 238 WALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLA 317 (524)
T ss_pred HHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 34566664 66899999999999999999999999999999999999999999999999888889999999999999999
Q ss_pred hhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccc
Q 039580 105 GIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 105 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp 147 (149)
|++........++.+.+..|++.|||.++++++....+..+|.
T Consensus 318 G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGs 360 (524)
T PF05977_consen 318 GAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGS 360 (524)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999887777666654
No 140
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.39 E-value=8.8e-12 Score=100.80 Aligned_cols=120 Identities=21% Similarity=0.144 Sum_probs=104.3
Q ss_pred chHHHHhhcCCCcc-hhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhhh
Q 039580 28 VYKEVGAALCTDPT-GLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSRGLNGI 106 (149)
Q Consensus 28 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 106 (149)
+.+++.+++|.+.. +.+++.+...++.+++.++.+++.||+++++.+.++.+..+++.+...+.++.+..++..++.|+
T Consensus 255 ~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 334 (1146)
T PRK08633 255 FPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGF 334 (1146)
T ss_pred hHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 34455677899988 99999999999999999999999999999999888888888877777777788888888899999
Q ss_pred HHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccc
Q 039580 107 GLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp 147 (149)
+.+...+..++++.+..|+++|++++++.+....+|..+++
T Consensus 335 ~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~ 375 (1146)
T PRK08633 335 SAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFL 375 (1146)
T ss_pred HHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888888775543
No 141
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.39 E-value=1.8e-11 Score=88.66 Aligned_cols=121 Identities=14% Similarity=0.046 Sum_probs=89.8
Q ss_pred chHHHHhhcCCCcchhhHHHHHHHH-HHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHH------hhhhHHHHHH
Q 039580 28 VYKEVGAALCTDPTGLGSLTLFRSI-VQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAI------STTFFQVAVS 100 (149)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 100 (149)
..+.+.+|.|.++++.++....... ...++..+.|++.||+|+|+.+..+....+........ .++.......
T Consensus 230 ~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (390)
T TIGR02718 230 LSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSC 309 (390)
T ss_pred HhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHH
Confidence 4556667789999999998887764 55677889999999999999988776655333222211 1233334445
Q ss_pred HHhhhhHHHHHHHhHHHHHhhhccc-CchhhHHHHHHHHhhhhhhcccc
Q 039580 101 RGLNGIGLAIVTLAIQSLVADSTDE-SNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 101 ~~~~G~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
..+.++..+...+...+...+..++ +++++.++..+...++|..+||.
T Consensus 310 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~ 358 (390)
T TIGR02718 310 SAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASS 358 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHH
Confidence 5566777788888888888888776 88999999999999999988875
No 142
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.37 E-value=2.6e-11 Score=89.04 Aligned_cols=119 Identities=12% Similarity=-0.070 Sum_probs=78.1
Q ss_pred hcccccchHHH-HhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHH--H--hhhhHH
Q 039580 22 ESLLPGVYKEV-GAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVA--I--STTFFQ 96 (149)
Q Consensus 22 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~--~--~~~~~~ 96 (149)
.+....+.|.+ .+++|.+..+.+...+...+...+++++.|+++||++||+.+.......++...... . .++...
T Consensus 259 ~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (432)
T PRK10406 259 FYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYA 338 (432)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHH
Confidence 33344455555 566899988888888888888889999999999999999987766554333322111 1 122222
Q ss_pred HHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhh
Q 039580 97 VAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGN 140 (149)
Q Consensus 97 ~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 140 (149)
......+.....+...+....+..|.+|+|+|+++.|+.+...+
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~ 382 (432)
T PRK10406 339 AFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVAN 382 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHH
Confidence 22222222233344445567788999999999999999765443
No 143
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.37 E-value=2e-11 Score=89.24 Aligned_cols=140 Identities=15% Similarity=0.043 Sum_probs=90.6
Q ss_pred HHHHHHHHHHhhhcccccchHHHHhhc--CCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHH-HHHHHHHHHHHHH
Q 039580 10 LVNLAGIMERADESLLPGVYKEVGAAL--CTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHI-IALGAFLWAAATF 86 (149)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~-~~~~~~~~~~~~~ 86 (149)
...+.+++............|.+.+++ +.+..+.+.......++..++.+..|+++||+++|+. .........++..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~ 325 (412)
T TIGR02332 246 LYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWL 325 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHH
Confidence 344445555555555666777777765 5677888989999999999999999999999997764 3333333333332
Q ss_pred HHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccccC
Q 039580 87 LVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGLC 149 (149)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~~ 149 (149)
.....++....+....+.+.+.....+.......|.+|+|+|+++.|+.+...++|..++|.+
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~ 388 (412)
T TIGR02332 326 LASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFL 388 (412)
T ss_pred HHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhh
Confidence 222222222222222222333322333344455678899999999999999999999998853
No 144
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.37 E-value=3.1e-11 Score=87.79 Aligned_cols=121 Identities=12% Similarity=0.102 Sum_probs=94.2
Q ss_pred cchHHH-HhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHh-----hhhHHHHHH
Q 039580 27 GVYKEV-GAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAIS-----TTFFQVAVS 100 (149)
Q Consensus 27 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 100 (149)
...|.+ .+++|.++.+.++......++..++.++.+++.||+++|+.+..+.....++....... ++.+.+...
T Consensus 236 ~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 315 (406)
T PRK15402 236 ALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAG 315 (406)
T ss_pred HHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHH
Confidence 334544 56789999999988887888889999999999999999999888887776666555432 345566777
Q ss_pred HHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 101 RGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 101 ~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
..+.|++.+...+..+...... ++++|++..+..+....+|..+|+.
T Consensus 316 ~~~~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~ 362 (406)
T PRK15402 316 LSLYAFGIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIE 362 (406)
T ss_pred HHHHHHHHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHH
Confidence 8889999888777766665444 4689999999998888888877763
No 145
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.36 E-value=3.1e-11 Score=89.00 Aligned_cols=104 Identities=15% Similarity=0.141 Sum_probs=92.4
Q ss_pred hhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHH---HhhhhHHHHHHHHhhhhHHHHHHHhHHHHH
Q 039580 43 LGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVA---ISTTFFQVAVSRGLNGIGLAIVTLAIQSLV 119 (149)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~ 119 (149)
.+.+.+++.++.++++...+.++||+|||..+....++..++..+.. ..+++..++.+|++.|+..+........++
T Consensus 62 wS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl 141 (485)
T KOG0569|consen 62 WSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYL 141 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 35566889999999999999999999999999988888777666554 457889999999999999999999999999
Q ss_pred hhhcccCchhhHHHHHHHHhhhhhhcc
Q 039580 120 ADSTDESNRGMAFGWLQLTGNFGSIIG 146 (149)
Q Consensus 120 ~~~~~~~~r~~~~~~~~~~~~~g~~ig 146 (149)
.|..|++.||......+.+..+|..++
T Consensus 142 ~E~sP~~~RG~~g~~~~~~~~~g~ll~ 168 (485)
T KOG0569|consen 142 TEISPKNLRGALGTLLQIGVVIGILLG 168 (485)
T ss_pred hhcChhhhccHHHHHHHHHHHHHHHHH
Confidence 999999999999999999888888776
No 146
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.36 E-value=2.9e-11 Score=86.40 Aligned_cols=140 Identities=10% Similarity=-0.022 Sum_probs=94.2
Q ss_pred HHHHHHHHHHHhhhcccccchHHH-HhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccc-hHHHH-HHHHH-HHHH
Q 039580 9 VLVNLAGIMERADESLLPGVYKEV-GAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNC-AHIIA-LGAFL-WAAA 84 (149)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~-~~~~~-~~~~~-~~~~ 84 (149)
+...+..+.............|.+ .+++|.++.+.+.......++..++.++.+++.||..+ |+... ..... ...+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~ 298 (379)
T TIGR00881 219 WYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVS 298 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHH
Confidence 333444444444444444455554 56789999999999999999999999999999998643 33222 11111 1122
Q ss_pred HHHHHH--hhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 85 TFLVAI--STTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 85 ~~~~~~--~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
...... ..+........++.|.......+.......|..|+++|+++.++.+....+|..++|.
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~ 364 (379)
T TIGR00881 299 LLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGL 364 (379)
T ss_pred HHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhh
Confidence 222222 2344455556666776665666666778899999999999999999999999988875
No 147
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.35 E-value=5.8e-11 Score=83.88 Aligned_cols=124 Identities=17% Similarity=0.201 Sum_probs=113.2
Q ss_pred hcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Q 039580 22 ESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSR 101 (149)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (149)
.....+.++.+.+|+|.|.+..|...+...++....+|+..++++|+|.++.+..++++.+++...-... +.+.++.+-
T Consensus 28 itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~~~L~~gt 106 (395)
T COG2807 28 ITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GLPLLFLGT 106 (395)
T ss_pred hhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHH
Confidence 3456778899999999999999999999999999999999999999999999999999999998887665 778888999
Q ss_pred HhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccc
Q 039580 102 GLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 102 ~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp 147 (149)
.+.|.+.+......++++.+.| ||+-+..+++|.+..++|..+++
T Consensus 107 ~l~G~gIav~nVLLPslIK~~F-pk~~~~mtglYs~sl~~~aaLaa 151 (395)
T COG2807 107 LLAGAGIAVINVLLPSLIKRDF-PKRVGLMTGLYSTSLGAGAALAA 151 (395)
T ss_pred HHHHhhHHHHHHhhhHHHHhhc-ccchhhHHhHHHHHHHHHHHHHh
Confidence 9999999999999999999999 57779999999999999888775
No 148
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.35 E-value=2.7e-11 Score=89.77 Aligned_cols=122 Identities=13% Similarity=-0.011 Sum_probs=91.9
Q ss_pred ccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHh--hhh-H-HHHHHH
Q 039580 26 PGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAIS--TTF-F-QVAVSR 101 (149)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~--~~~-~-~~~~~~ 101 (149)
....|.+.++.|.+..+..+......+...++.++.+++.||+|||+.+..+....+++.+..... ++. . ......
T Consensus 291 ~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~ 370 (479)
T PRK10077 291 LYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSM 370 (479)
T ss_pred HHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHH
Confidence 345678888899888777777777888899999999999999999999999998888877665432 121 1 222333
Q ss_pred HhhhhHHHH-HHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccc
Q 039580 102 GLNGIGLAI-VTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 102 ~~~G~~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp 147 (149)
.+.+.+.+. ..+....++.|.+|+++|+++.|+.+....+|..+++
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~ 417 (479)
T PRK10077 371 LFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVS 417 (479)
T ss_pred HHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHH
Confidence 444444443 2367789999999999999999999888888887664
No 149
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.34 E-value=7.1e-11 Score=85.86 Aligned_cols=119 Identities=12% Similarity=0.013 Sum_probs=91.0
Q ss_pred chHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHH-HHHHHHHHHHhhhhHHHHHHHHhhhh
Q 039580 28 VYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFL-WAAATFLVAISTTFFQVAVSRGLNGI 106 (149)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~G~ 106 (149)
..|.+.+++|.++++.+.....+.++..++.++.+++.||.++ +....+... ......+....++.+.+.....+.|+
T Consensus 239 ~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~ 317 (394)
T PRK10213 239 IRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVK-LALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGL 317 (394)
T ss_pred HHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccch-hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 3577788899999999999999999999999999999999654 443443333 33334444456677778888899999
Q ss_pred HHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 107 GLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
+.+...+..++.+.+..| +++++..+......++|..+||.
T Consensus 318 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~ 358 (394)
T PRK10213 318 TFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAA 358 (394)
T ss_pred HHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999989998886 55667777776677777777764
No 150
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.34 E-value=3.3e-11 Score=87.48 Aligned_cols=112 Identities=9% Similarity=0.100 Sum_probs=91.6
Q ss_pred CCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHH
Q 039580 37 CTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQ 116 (149)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~ 116 (149)
+.+..+.+...+...+...+..+..+++.||+|+|+.+..+..+.++........++.+.+...+.+.|++.........
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 329 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCF 329 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556778888888888999999999999999999999998888888777767788888888889999988777666667
Q ss_pred HHHhhhcccCchhhHHHH-HHHHhhhhhhcccc
Q 039580 117 SLVADSTDESNRGMAFGW-LQLTGNFGSIIGGL 148 (149)
Q Consensus 117 ~~~~~~~~~~~r~~~~~~-~~~~~~~g~~igp~ 148 (149)
.+..+..|++.+++..+. ++....+|..++|.
T Consensus 330 ~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~ 362 (396)
T TIGR00882 330 KYITSQFDVRLSATIYLIGFQFAKQLAMIFLST 362 (396)
T ss_pred HHHHHhCCcceEEEeehHHHHHHHHHHHHHHHH
Confidence 777888888888887766 56777788777764
No 151
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.33 E-value=4.9e-11 Score=86.68 Aligned_cols=117 Identities=13% Similarity=0.057 Sum_probs=93.6
Q ss_pred HHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhhhHHH
Q 039580 30 KEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSRGLNGIGLA 109 (149)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 109 (149)
++..+.+|.++.+.+.......++..++++..+++.||+++|+.+..+.. .++......+.++++......++.|++.+
T Consensus 230 ~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~g 308 (393)
T PRK11195 230 AWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQHSLLPAYPLLILIGALGG 308 (393)
T ss_pred HHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHHhHHHHHHHHHHHHHHhhh
Confidence 34456689999999999999999999999999999999999888877753 34444444556677777777888999988
Q ss_pred HHHHhHHHHHhhhcccCc-hhhHHHHHHHHhhhhhhccc
Q 039580 110 IVTLAIQSLVADSTDESN-RGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~-r~~~~~~~~~~~~~g~~igp 147 (149)
...+..++.+.+..|+|. +|++.++.++..+++..++.
T Consensus 309 ~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~ 347 (393)
T PRK11195 309 FFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLML 347 (393)
T ss_pred hhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHH
Confidence 888888888888765554 79999999988888877654
No 152
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.33 E-value=1.6e-11 Score=99.45 Aligned_cols=141 Identities=11% Similarity=-0.020 Sum_probs=107.1
Q ss_pred HHHHHHHHHHHHhhhcccccchHHH-HhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHH
Q 039580 8 MVLVNLAGIMERADESLLPGVYKEV-GAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATF 86 (149)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 86 (149)
++...+..+.............|.+ .+.+|.++.+.+++.+.+.++.+++.++.|++.||.++++.+..+.++.++..+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 306 (1140)
T PRK06814 227 IWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGL 306 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHH
Confidence 3334444444444333343445555 556899999999999999999999999999999988877766655555554443
Q ss_pred HHHHh--------------------hhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcc
Q 039580 87 LVAIS--------------------TTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIG 146 (149)
Q Consensus 87 ~~~~~--------------------~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig 146 (149)
...+. ++.+.+.+..++.|++.+...+..++++.+..|+++||+++|..++...+|..++
T Consensus 307 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig 386 (1140)
T PRK06814 307 DLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAG 386 (1140)
T ss_pred HHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHH
Confidence 33332 6677778888999999999999999999999999999999999999888888777
Q ss_pred cc
Q 039580 147 GL 148 (149)
Q Consensus 147 p~ 148 (149)
++
T Consensus 387 ~~ 388 (1140)
T PRK06814 387 TI 388 (1140)
T ss_pred HH
Confidence 64
No 153
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.32 E-value=1.3e-10 Score=83.57 Aligned_cols=120 Identities=16% Similarity=0.161 Sum_probs=91.3
Q ss_pred ccchHHH-HhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHh-----hhhHHHHH
Q 039580 26 PGVYKEV-GAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAIS-----TTFFQVAV 99 (149)
Q Consensus 26 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 99 (149)
....|.+ .+++|.++.+.+.......++..++.++.|++.||+|+|+.+..+.....++....... ++......
T Consensus 226 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (385)
T TIGR00710 226 FSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIG 305 (385)
T ss_pred HHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHH
Confidence 3344544 56789999999999999999999999999999999999999888877776665544432 23344555
Q ss_pred HHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhh-hhhcc
Q 039580 100 SRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNF-GSIIG 146 (149)
Q Consensus 100 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~ig 146 (149)
...+.|++.+...+.......|..| ++|+++.++.+..... |...+
T Consensus 306 ~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~ 352 (385)
T TIGR00710 306 PMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVG 352 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHH
Confidence 6777888888888888888888875 7899999987766544 44433
No 154
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.32 E-value=1e-10 Score=86.34 Aligned_cols=141 Identities=10% Similarity=-0.040 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHHhhhcccccchHHHH-hhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhc--cchHHHH-HHHHHHHH
Q 039580 8 MVLVNLAGIMERADESLLPGVYKEVG-AALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHH--NCAHIIA-LGAFLWAA 83 (149)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--g~~~~~~-~~~~~~~~ 83 (149)
++...+..+......+....+.|.+. ++.|.+..+.+.....+.++..++.++.|+++||+ +||+... ....+..+
T Consensus 255 ~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~ 334 (452)
T PRK11273 255 LWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTI 334 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHH
Confidence 33444444444444344455666665 45789988999988889999999999999999999 4444322 22222233
Q ss_pred HHHHHHH--hhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhc-ccc
Q 039580 84 ATFLVAI--STTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSII-GGL 148 (149)
Q Consensus 84 ~~~~~~~--~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i-gp~ 148 (149)
+...... .++.+...+...+.|.+.............|.+|+++|+++.|+.+....+|..+ +|.
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~ 402 (452)
T PRK11273 335 ATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASA 402 (452)
T ss_pred HHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhh
Confidence 3222222 2334444444455555433333334456789999999999999998877777544 554
No 155
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.32 E-value=4.1e-11 Score=86.43 Aligned_cols=139 Identities=14% Similarity=0.021 Sum_probs=91.1
Q ss_pred hHHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccc---hHHHH-HHHHHH
Q 039580 6 LTMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNC---AHIIA-LGAFLW 81 (149)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~---~~~~~-~~~~~~ 81 (149)
+.++...+..++.....+....+.|.+.++.|.+.. .+.......+...++ .++++||.+| |+... ......
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~ 267 (368)
T TIGR00903 192 KDLWIIGAILGFGVALFDNLAIWLEAALRPAGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLI 267 (368)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHH
Confidence 334555556666666666666778888788787754 455544444444444 4677777654 33322 233333
Q ss_pred HHHHHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 82 AAATFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
++........++.....+...+.+++....++...++.+|.+|++.|+++.|+.+...++|+..+|.
T Consensus 268 a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~ 334 (368)
T TIGR00903 268 AAFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALAL 334 (368)
T ss_pred HHHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHH
Confidence 4433344444455444555566677777777778899999999999999999999999999877764
No 156
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.31 E-value=7.9e-12 Score=91.52 Aligned_cols=120 Identities=16% Similarity=0.164 Sum_probs=95.0
Q ss_pred cchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhh----ccch-HHHHHHHHHHHHHHHHHHHhhh------hH
Q 039580 27 GVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVH----HNCA-HIIALGAFLWAAATFLVAISTT------FF 95 (149)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~g~~-~~~~~~~~~~~~~~~~~~~~~~------~~ 95 (149)
...+++.+++|.++.+.|++.+...+..++..|+.|+++|| +||| +.+..+....+++.+.....++ ..
T Consensus 21 ~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~ 100 (437)
T TIGR00792 21 YLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLV 100 (437)
T ss_pred HHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHH
Confidence 34666778899999999999999999999999999999998 5764 4566777777777666655443 34
Q ss_pred HHHHHHHhhhhHHHHHHHhHHHHHhhhc-ccCchhhHHHHHHHHhhhhhhcc
Q 039580 96 QVAVSRGLNGIGLAIVTLAIQSLVADST-DESNRGMAFGWLQLTGNFGSIIG 146 (149)
Q Consensus 96 ~~~~~~~~~G~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~ig 146 (149)
.+.+.+.+.+++.+...+...++..|.. |+++|++..+..+....+|..++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~ 152 (437)
T TIGR00792 101 YAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLV 152 (437)
T ss_pred HHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566778888888887778888888887 57899999998887777776544
No 157
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.31 E-value=4.7e-11 Score=89.28 Aligned_cols=131 Identities=14% Similarity=0.040 Sum_probs=84.0
Q ss_pred HHhhhcccccchHHHHhhcCCCcchhhH------------HHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHH
Q 039580 18 ERADESLLPGVYKEVGAALCTDPTGLGS------------LTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAAT 85 (149)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~ 85 (149)
.....+......|.+.++.|.+..+.+. ......++..++.++.+++.||+|||+.+..+....+++.
T Consensus 300 ~~~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~ 379 (502)
T TIGR00887 300 LDIAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLF 379 (502)
T ss_pred HHHHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHH
Confidence 3334444555678887888876543221 1233445566788899999999999999888877766665
Q ss_pred HHHHHhhh---hHHHHHHHHhh-hhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 86 FLVAISTT---FFQVAVSRGLN-GIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 86 ~~~~~~~~---~~~~~~~~~~~-G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
.......+ .........+. ..+.....+....+..|.+|++.|+++.++.+....+|..++|.
T Consensus 380 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~ 446 (502)
T TIGR00887 380 FVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQF 446 (502)
T ss_pred HHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHH
Confidence 54443221 11111111111 11122234556677899999999999999999999999888774
No 158
>PRK09848 glucuronide transporter; Provisional
Probab=99.31 E-value=3.9e-11 Score=88.48 Aligned_cols=142 Identities=13% Similarity=0.147 Sum_probs=102.2
Q ss_pred HHHHHHHHHHHHHhhhcccccchHHHHh-hcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHH
Q 039580 7 TMVLVNLAGIMERADESLLPGVYKEVGA-ALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAAT 85 (149)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~ 85 (149)
.+....+..++............|++.+ .+|.++...++......++..++.++.+++.||+|+|+.+..+..+.+++.
T Consensus 229 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~ 308 (448)
T PRK09848 229 PLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGY 308 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 3344444444444444444445555543 466655554554555567788899999999999999999999988887776
Q ss_pred HHHHHhh--hhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccC-------chhhHHHHHHHHhhhhhhcccc
Q 039580 86 FLVAIST--TFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDES-------NRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 86 ~~~~~~~--~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-------~r~~~~~~~~~~~~~g~~igp~ 148 (149)
+...+.+ +.+.+.+...+.|+|.+...+...+...|..|++ ++|...+..+....+|..+|+.
T Consensus 309 ~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~ 380 (448)
T PRK09848 309 LLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGS 380 (448)
T ss_pred HHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHH
Confidence 6655543 5666667788899999999999999998888654 4588899999998898888764
No 159
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.30 E-value=1.1e-10 Score=85.76 Aligned_cols=140 Identities=12% Similarity=-0.016 Sum_probs=87.2
Q ss_pred HHHHHHHHHHhhhcccccchHHHH-hhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhc--cchHHH-HHHHHHHHHHH
Q 039580 10 LVNLAGIMERADESLLPGVYKEVG-AALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHH--NCAHII-ALGAFLWAAAT 85 (149)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--g~~~~~-~~~~~~~~~~~ 85 (149)
...+..+...........+.|.+. +++|.+..+.+...+...++..++.++.|+++||+ ++|+.. ...........
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~ 326 (434)
T PRK11663 247 LLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSV 326 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHH
Confidence 333334444444444445556655 67899999999999999999999999999999998 333332 22111111111
Q ss_pred HH--HHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccccC
Q 039580 86 FL--VAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGLC 149 (149)
Q Consensus 86 ~~--~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~~ 149 (149)
.. ....++........+..|++.............|.+|+++|++..|+.+....+|..++|.+
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~ 392 (434)
T PRK11663 327 GSLWLMPFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYP 392 (434)
T ss_pred HHHHHcccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhccc
Confidence 11 11122333333333444443322233334567899999999999999999999999999863
No 160
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.30 E-value=2.6e-11 Score=88.93 Aligned_cols=144 Identities=17% Similarity=0.128 Sum_probs=116.1
Q ss_pred chHHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHH
Q 039580 5 TLTMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAA 84 (149)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~ 84 (149)
++.+.......++........+...+++.++.-.+++..+.......++..++.++.++++||+|+|+.+..+....+++
T Consensus 224 nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~ 303 (428)
T PF13347_consen 224 NRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALG 303 (428)
T ss_pred cchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHH
Confidence 34555566667777777777777777776654334467788888899999999999999999999999999999999998
Q ss_pred HHHHHHhh--hhHHHHHHHHhhhhHHHHHHHhHHHHHhhhccc-------CchhhHHHHHHHHhhhhhhcccc
Q 039580 85 TFLVAIST--TFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDE-------SNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 85 ~~~~~~~~--~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~-------~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
.+...+.+ +.+.+++...+.|++.+..++...+.++|..|. ++.|...|..+....++..+++.
T Consensus 304 ~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~ 376 (428)
T PF13347_consen 304 FLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGA 376 (428)
T ss_pred HHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHH
Confidence 88777665 899999999999999999999999999998863 34577888888877777776653
No 161
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.29 E-value=1.4e-10 Score=83.44 Aligned_cols=134 Identities=13% Similarity=0.017 Sum_probs=103.5
Q ss_pred HHHHHHHHhh-hcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHH
Q 039580 12 NLAGIMERAD-ESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAI 90 (149)
Q Consensus 12 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~ 90 (149)
....++.... +..+.++-|.+.+..|.|.+..+++...+.++..+++.+.|+++|| +.|+.+.....+.++......+
T Consensus 217 l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~ 295 (394)
T COG2814 217 LLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTF 295 (394)
T ss_pred HHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHH
Confidence 3334444443 4455666788888899999999999999999999999999999999 8999988887887777766554
Q ss_pred -hhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccc
Q 039580 91 -STTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 91 -~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp 147 (149)
.++.+...+..++.|+......+..+...++ ..||++..+.+++....++|..+|.
T Consensus 296 ~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA 352 (394)
T COG2814 296 TGASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGA 352 (394)
T ss_pred hcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHH
Confidence 4556666666777888777666666666666 4478899999998888888877664
No 162
>TIGR00898 2A0119 cation transport protein.
Probab=99.27 E-value=9.1e-11 Score=87.59 Aligned_cols=103 Identities=16% Similarity=0.115 Sum_probs=84.1
Q ss_pred HHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhh--HHHHHHHHhhhhHHHHHHHhHHHHHhhhc
Q 039580 46 LTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTF--FQVAVSRGLNGIGLAIVTLAIQSLVADST 123 (149)
Q Consensus 46 ~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~G~~~~~~~~~~~~~~~~~~ 123 (149)
......+...++.++.+++.||+|||+.+..+....+++.+...+.++. +...+...+.+.+.+..++..+.+..|.+
T Consensus 360 ~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 439 (505)
T TIGR00898 360 DLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELY 439 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 3345567777888999999999999999999888888877766665543 44455566667777778888899999999
Q ss_pred ccCchhhHHHHHHHHhhhhhhcccc
Q 039580 124 DESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 124 ~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
|++.|+++.|+.+....+|..++|.
T Consensus 440 p~~~r~~~~g~~~~~~~ig~~i~p~ 464 (505)
T TIGR00898 440 PTVVRNLGVGVCSTMARVGSIISPF 464 (505)
T ss_pred cHHHHhhhHhHHHHHHHHHHHHHhH
Confidence 9999999999999999999999885
No 163
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.27 E-value=2.1e-10 Score=80.98 Aligned_cols=138 Identities=15% Similarity=0.033 Sum_probs=100.8
Q ss_pred HHHHHHHHHHHHhhhcccccchHHHHhh---cCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHH
Q 039580 8 MVLVNLAGIMERADESLLPGVYKEVGAA---LCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAA 84 (149)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~ 84 (149)
.....+..++..........+.+.+.++ +|.++++.+...+.+..+..++....+++.||+|+||.+..+..+..+.
T Consensus 142 ~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~ 221 (310)
T TIGR01272 142 LVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLL 221 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 3444445555554444555555655543 6889999999999999999999999999999999999988887777776
Q ss_pred HHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 85 TFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
..+....++.... ....+.|++.+..+|...+...+..|+ +.+++.++. ....+|..+.|.
T Consensus 222 ~~l~~~~~~~~~~-~~~~l~g~~~s~i~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~ 282 (310)
T TIGR01272 222 SIGAALTHGYVAM-WFVLALGLFNSIMFPTIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPL 282 (310)
T ss_pred HHHHHHcCCHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHH
Confidence 6555444443333 355678999999999999999998864 345666665 455678777774
No 164
>PRK10054 putative transporter; Provisional
Probab=99.26 E-value=7.3e-11 Score=85.81 Aligned_cols=114 Identities=12% Similarity=0.049 Sum_probs=91.4
Q ss_pred hhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHhhhhHHHHHH
Q 039580 34 AALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAIS-TTFFQVAVSRGLNGIGLAIVT 112 (149)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~G~~~~~~~ 112 (149)
++.+.+....+.....+.+.....+++.|++.||+++|+.+..+.....++.....+. ++.+.+.+...+.|++.+...
T Consensus 237 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 316 (395)
T PRK10054 237 ADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYA 316 (395)
T ss_pred cccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHH
Confidence 3445566677888888888878888899999999999999988887777777666554 566667778889999999888
Q ss_pred HhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 113 LAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 113 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
|..+..+.+..|++.|+++.+..+ ...+|..+||.
T Consensus 317 p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~ 351 (395)
T PRK10054 317 PGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPL 351 (395)
T ss_pred hhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHH
Confidence 998999999999999999988655 44467777764
No 165
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.25 E-value=4.1e-10 Score=84.11 Aligned_cols=121 Identities=11% Similarity=0.066 Sum_probs=89.8
Q ss_pred cchHHHHhhcCCCcchhhHHHH-HHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHH---HHHh-hhhHHHHHHH
Q 039580 27 GVYKEVGAALCTDPTGLGSLTL-FRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFL---VAIS-TTFFQVAVSR 101 (149)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~ 101 (149)
...|++.+++|.|+++.++... ...++..++.++.|++.||+|+|+.+..+....++.... .... ++.+.+....
T Consensus 244 ~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~ 323 (491)
T PRK11010 244 LTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAV 323 (491)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHH
Confidence 3455556779999999999874 556899999999999999999988877665544443322 2232 3444445556
Q ss_pred HhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccc
Q 039580 102 GLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 102 ~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp 147 (149)
++..+..+...+...+...+..+++.+++..++.+...++|..+++
T Consensus 324 ~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~ 369 (491)
T PRK11010 324 FFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVG 369 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 6666666666777788899999999999999999888888876554
No 166
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.25 E-value=4.2e-10 Score=81.42 Aligned_cols=119 Identities=17% Similarity=0.086 Sum_probs=84.4
Q ss_pred chHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHH-HhhhhHHHHHHHHhhhh
Q 039580 28 VYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVA-ISTTFFQVAVSRGLNGI 106 (149)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~G~ 106 (149)
..|++.+..|.++++.++..+...++..++.++.+++.||+|+|+....+..+.+++.+... ..++.+...+...+.+.
T Consensus 222 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 301 (382)
T PRK10091 222 IKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCA 301 (382)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 45666667899999999999999999999999999999999999998888877777665443 34455555566666666
Q ss_pred HHHHHHHhHHH-HHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 107 GLAIVTLAIQS-LVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 107 ~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
+.....+.... ...+..++++++... .+....+|..+||.
T Consensus 302 g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~Gp~ 342 (382)
T PRK10091 302 GLFALSAPLQILLLQNAKGGELLGAAG--GQIAFNLGSAIGAY 342 (382)
T ss_pred HHHhhhHHHHHHHHHhCCcchHHHHHH--HHHHHHHHHHHHHH
Confidence 65544444443 344444455555543 35566777777764
No 167
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.24 E-value=4.2e-10 Score=82.02 Aligned_cols=138 Identities=13% Similarity=0.134 Sum_probs=108.7
Q ss_pred HHHHHHHHHHhhhcccccchHHHHhhcC-CCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHH
Q 039580 10 LVNLAGIMERADESLLPGVYKEVGAALC-TDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLV 88 (149)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~ 88 (149)
...+..+...........+.+.+.++.| .+.+..+...+...++.++.-...+++..|+|.|+++.++....++=..+.
T Consensus 211 ~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~ 290 (400)
T PF03825_consen 211 VFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLY 290 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 3334445555555566666777778887 677777888888889999999999999999999999999999988887777
Q ss_pred HHh-hhhHHHHHH----HHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHH-Hhhhhhhccc
Q 039580 89 AIS-TTFFQVAVS----RGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQL-TGNFGSIIGG 147 (149)
Q Consensus 89 ~~~-~~~~~~~~~----~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~~g~~igp 147 (149)
+.. ++.+...+. +.+.|+..+..+.+...++.+..|++.|++++++++. ..++|..+|.
T Consensus 291 a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~ 355 (400)
T PF03825_consen 291 AYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGS 355 (400)
T ss_pred HHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHH
Confidence 766 454443333 4569999999999999999999999999999999765 4567776654
No 168
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.23 E-value=6e-10 Score=83.37 Aligned_cols=144 Identities=13% Similarity=0.127 Sum_probs=127.4
Q ss_pred hHHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhcc--chHHHHHHHHHHHH
Q 039580 6 LTMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHN--CAHIIALGAFLWAA 83 (149)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g--~~~~~~~~~~~~~~ 83 (149)
+.++...+...+....+......+|.+.++.+.+..+.....++..+...++.+..|+++|+.. ++.+..++.+..++
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl 377 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGL 377 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHH
Confidence 4566677777888888888888899999999999999999999999999999999999999998 34445566666777
Q ss_pred HHHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccccC
Q 039580 84 ATFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGLC 149 (149)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~~ 149 (149)
......+.++++.+.....+.|+..|.........+.|..+.++-..+.|+.....+++..+||.+
T Consensus 378 ~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPi 443 (509)
T KOG2504|consen 378 ARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPI 443 (509)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCccc
Confidence 777888999999999999999999999888888899999999999999999999999999999874
No 169
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.23 E-value=1.6e-10 Score=84.97 Aligned_cols=146 Identities=16% Similarity=0.133 Sum_probs=119.3
Q ss_pred CccchHHHHHHHHHHHHHhhhcccccchHHHHhh--cCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccc-hHHHHHHH
Q 039580 2 KSETLTMVLVNLAGIMERADESLLPGVYKEVGAA--LCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNC-AHIIALGA 78 (149)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~-~~~~~~~~ 78 (149)
|.+|+.+....+..+......+...+-.-.|.++ .+-+.+..|++.+...++.++.++.+|++..|.++ |+-++.+.
T Consensus 30 ~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ 109 (488)
T KOG2325|consen 30 KTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSF 109 (488)
T ss_pred CCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHH
Confidence 4568888888888888888887776665555566 55677789999999999999999999999999995 66677888
Q ss_pred HHHHHHHHHH-HH---hh-hhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 79 FLWAAATFLV-AI---ST-TFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 79 ~~~~~~~~~~-~~---~~-~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
+...++.++. .+ .+ .-+.++++|++.|+|.+ .....-+++++....++|.|+++....+..+|..+||.
T Consensus 110 ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~-n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~ 183 (488)
T KOG2325|consen 110 LIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVG-NFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPT 183 (488)
T ss_pred HHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcc-cHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHH
Confidence 8888888766 33 23 56788899999999877 44567888888888999999999988888888888875
No 170
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.22 E-value=1e-09 Score=78.98 Aligned_cols=118 Identities=10% Similarity=0.087 Sum_probs=82.1
Q ss_pred hHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHH---HH-hhhhHHHHHHHHhh
Q 039580 29 YKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLV---AI-STTFFQVAVSRGLN 104 (149)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~ 104 (149)
.+.+.+++|.++.+.+.......++..++.++.+++.||+|+|+.+..+.....+..... .. ..+.+...+...+.
T Consensus 218 ~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (377)
T PRK11102 218 PFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAF 297 (377)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 445567789999999999999999999999999999999999999888776544432222 12 22444444455455
Q ss_pred hhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHH-hhhhhhccc
Q 039580 105 GIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLT-GNFGSIIGG 147 (149)
Q Consensus 105 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~g~~igp 147 (149)
+.+.+...+.....+.|..| +++++..+..+.. ..+|..+++
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~ 340 (377)
T PRK11102 298 VGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGA 340 (377)
T ss_pred HHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHH
Confidence 55555555556666777664 8899999886543 345554443
No 171
>PRK10133 L-fucose transporter; Provisional
Probab=99.22 E-value=3.6e-10 Score=83.33 Aligned_cols=116 Identities=11% Similarity=-0.022 Sum_probs=89.4
Q ss_pred hHHH-HhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhhhH
Q 039580 29 YKEV-GAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSRGLNGIG 107 (149)
Q Consensus 29 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 107 (149)
.+++ ++++|.++.+.+.....+.++..++.++.+++.||+|+|+++..+..+..+......+.++.+ ......+.|++
T Consensus 282 ~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~glg 360 (438)
T PRK10133 282 IRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GLIALTLCSAF 360 (438)
T ss_pred HHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHH
Confidence 3443 356899999999999999999999999999999999999998888777666655555555432 34567789999
Q ss_pred HHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccc
Q 039580 108 LAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp 147 (149)
.+..+|...+...|..|+ +.+.+.++..+. ..|..++|
T Consensus 361 ~~~i~P~~~s~a~~~~~~-~~~~as~l~~~~-~~g~~~~~ 398 (438)
T PRK10133 361 MSIQYPTIFSLGIKNLGQ-DTKYGSSFIVMT-IIGGGIVT 398 (438)
T ss_pred HHHHHHHHHHHHHcccch-hhccchhHHhHH-hccchHHH
Confidence 999999999999999854 466777766543 34555444
No 172
>PRK11043 putative transporter; Provisional
Probab=99.21 E-value=8.3e-10 Score=80.20 Aligned_cols=121 Identities=6% Similarity=-0.056 Sum_probs=89.7
Q ss_pred ccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHH---HH--hhhhHHHHHH
Q 039580 26 PGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLV---AI--STTFFQVAVS 100 (149)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~ 100 (149)
....|.+.++.|.++.+.++......++..++....+++.||+++|+.........+++.... .. .++.+.....
T Consensus 223 ~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (401)
T PRK11043 223 LTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIP 302 (401)
T ss_pred HHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHH
Confidence 344677777889999999998888888889999999999999999987766555544433221 12 2345555566
Q ss_pred HHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccc
Q 039580 101 RGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 101 ~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp 147 (149)
..+.|.+.+..++..+....|..| ++|+++.++.+.....+...++
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~ 348 (401)
T PRK11043 303 FCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLAS 348 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHH
Confidence 777888888888888888777774 6899999998877665555443
No 173
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.21 E-value=2.7e-10 Score=84.65 Aligned_cols=143 Identities=11% Similarity=0.029 Sum_probs=100.1
Q ss_pred hHHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHH
Q 039580 6 LTMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAAT 85 (149)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~ 85 (149)
+.+.......+.............+++.+....++++.+...+...++..++.++.+++.||+|+|+.+..+..+.+++.
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~ 310 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSC 310 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 44444444455555555555555555555444456667777777778889999999999999999999988887766555
Q ss_pred HHHHH-----hhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcc-------cCchhhHHHHHHHHhhhhhhcccc
Q 039580 86 FLVAI-----STTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTD-------ESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 86 ~~~~~-----~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-------~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
+.... .++.+.+++...+.|++.+...+...+++.|..| +++.|...+.......+|..+++.
T Consensus 311 ~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~ 385 (473)
T PRK10429 311 GVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAF 385 (473)
T ss_pred HHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHH
Confidence 44322 3456666777788899999999988999999865 233355778877777777777653
No 174
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.20 E-value=3.9e-10 Score=83.00 Aligned_cols=135 Identities=12% Similarity=-0.010 Sum_probs=81.5
Q ss_pred HHHHHHhhhcccccchHHHHh-hcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHH---HHHHHH
Q 039580 14 AGIMERADESLLPGVYKEVGA-ALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAA---ATFLVA 89 (149)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~---~~~~~~ 89 (149)
..++..........+.|.+.+ +.|.++.+.++......+...++.++.|++.||+++++....+...... +.....
T Consensus 259 ~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (438)
T TIGR00712 259 ANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYW 338 (438)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHH
Confidence 333333333344455666654 4788999999999999999999999999999999654322223222211 111111
Q ss_pred Hh--hhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhh-hhcccc
Q 039580 90 IS--TTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFG-SIIGGL 148 (149)
Q Consensus 90 ~~--~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g-~~igp~ 148 (149)
.. .+.+......+..|.+.............|.+|+++|+++.|+.+....+| ..++|.
T Consensus 339 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~ 400 (438)
T TIGR00712 339 MNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASA 400 (438)
T ss_pred hcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcch
Confidence 21 233333333344444322222222346779999999999999998776765 456764
No 175
>PRK09669 putative symporter YagG; Provisional
Probab=99.20 E-value=4.9e-10 Score=82.60 Aligned_cols=139 Identities=13% Similarity=0.034 Sum_probs=91.9
Q ss_pred HHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHH-
Q 039580 10 LVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLV- 88 (149)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~- 88 (149)
.+....+.............+++.++.-.+++..+.......+...++.++.+++.||+|+|+.+..+....++.....
T Consensus 233 ~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~ 312 (444)
T PRK09669 233 IMFIFNVVLLTAVVTRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIF 312 (444)
T ss_pred HHHHHHHHHHHHHHHHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 3333333333333333334444443322233344555566677788889999999999999999988877665443322
Q ss_pred HH-hhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhccc-------CchhhHHHHHHHHhhhhhhcccc
Q 039580 89 AI-STTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDE-------SNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 89 ~~-~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~-------~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
.. .++.+.+.+...+.|++.+...+...++++|..|. ++.|...+..+....+|..+||.
T Consensus 313 ~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~ 380 (444)
T PRK09669 313 FIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGA 380 (444)
T ss_pred HhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHH
Confidence 22 35667777888899999999999999999988762 22355677777777888777764
No 176
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.19 E-value=3.1e-10 Score=81.19 Aligned_cols=127 Identities=14% Similarity=0.067 Sum_probs=89.2
Q ss_pred HHHHHhhhcccccchHHH-HhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHH--h
Q 039580 15 GIMERADESLLPGVYKEV-GAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAI--S 91 (149)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~--~ 91 (149)
.+.............|.+ .+++|.++.+.+.......+...++.++.|++.||+|+|+....+......+.....+ .
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~ 313 (366)
T TIGR00886 234 YSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLV 313 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCC
Confidence 333333333344444555 4668999999999999999999999999999999999998887777666555544433 2
Q ss_pred h--hhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhh
Q 039580 92 T--TFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFG 142 (149)
Q Consensus 92 ~--~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 142 (149)
+ +.+.......+.+++.+...+...+...+..| +++++..|+.+...++|
T Consensus 314 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 314 SPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred CcchHHHHHHHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 2 45554555555555556556666777778775 79999999988777665
No 177
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.16 E-value=2.9e-10 Score=84.59 Aligned_cols=122 Identities=15% Similarity=0.080 Sum_probs=83.5
Q ss_pred ccchHH-HHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchH-------HHHHHHHHHHHHHHHHHHhhhhHHH
Q 039580 26 PGVYKE-VGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAH-------IIALGAFLWAAATFLVAISTTFFQV 97 (149)
Q Consensus 26 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (149)
....|. +.+++|.+..+.+...+...++..++.++.|+++||++||+ .......+.++........++.+..
T Consensus 272 ~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~ 351 (476)
T PLN00028 272 DNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAA 351 (476)
T ss_pred HhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHH
Confidence 334444 45678999999999999999999999999999999998652 2222222222323333344555555
Q ss_pred HHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 98 AVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 98 ~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
.+...+.+++.+...+...++..+.. +++|++..|+.+...++|..++|.
T Consensus 352 ~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~g~lg~~i~~~ 401 (476)
T PLN00028 352 IVVMILFSIFVQAACGATFGIVPFVS-RRSLGVISGLTGAGGNVGAVLTQL 401 (476)
T ss_pred HHHHHHHHHHHHHhhhhhcccCcccC-hhhchhhhhhhhccccHHHHHHHH
Confidence 55556666665555555556666654 679999999988888888877764
No 178
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.16 E-value=1.6e-09 Score=73.95 Aligned_cols=126 Identities=16% Similarity=0.050 Sum_probs=101.4
Q ss_pred HHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHH-------
Q 039580 18 ERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAI------- 90 (149)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~------- 90 (149)
.....+.++.+-|.+.+.+|+|.+|...+.+...++..+ .++.|.+.||+|++.++.+|.....++....-.
T Consensus 14 ~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~ 92 (250)
T PF06813_consen 14 CSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIP 92 (250)
T ss_pred hcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccC
Confidence 333556778889999999999999999999999999876 589999999999999999999988888755432
Q ss_pred hhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhc
Q 039580 91 STTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSII 145 (149)
Q Consensus 91 ~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i 145 (149)
..+.|.+.+...+.|.+.+...++......+.|| ++||++.|+.-...++++.+
T Consensus 93 ~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai 146 (250)
T PF06813_consen 93 SLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAI 146 (250)
T ss_pred ccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHH
Confidence 1356677777777777777777777777778896 68999999987777777654
No 179
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.15 E-value=3.6e-10 Score=81.16 Aligned_cols=141 Identities=11% Similarity=0.047 Sum_probs=109.1
Q ss_pred chHHHHHHHHHHHHHhhhcccccchHHH-HhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHH
Q 039580 5 TLTMVLVNLAGIMERADESLLPGVYKEV-GAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAA 83 (149)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~ 83 (149)
++..+.+++.++......-.++...|.+ .++++.++.+.+.....+.+...+..|..|+++||+|.+|+.......+++
T Consensus 217 ~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~ 296 (417)
T COG2223 217 NKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMAL 296 (417)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHH
Confidence 4456777777887777776666666655 678999999999999999999999999999999999999999998888888
Q ss_pred HHHHHHHh-------hhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcc
Q 039580 84 ATFLVAIS-------TTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIG 146 (149)
Q Consensus 84 ~~~~~~~~-------~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig 146 (149)
+....... .+...........++..+.....+...+...+ +++-|.+.|+.....++|...-
T Consensus 297 ~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if-~~~~G~v~G~vga~G~lGGf~l 365 (417)
T COG2223 297 AAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIF-PKETGAVTGIVGAIGGLGGFFL 365 (417)
T ss_pred HHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHH-HhhhhHHHHHHHHhccccccch
Confidence 77766554 34555555555566666666666777777777 4577889999888888886543
No 180
>PRK09669 putative symporter YagG; Provisional
Probab=99.14 E-value=3.3e-10 Score=83.52 Aligned_cols=121 Identities=13% Similarity=0.111 Sum_probs=91.1
Q ss_pred cchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhh----ccc-hHHHHHHHHHHHHHHHHHHHhhh------hH
Q 039580 27 GVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVH----HNC-AHIIALGAFLWAAATFLVAISTT------FF 95 (149)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~g~-~~~~~~~~~~~~~~~~~~~~~~~------~~ 95 (149)
...+++.+++|+|+.+++.+.....+..++..|+.|+++|| +|| |+.+.++....++...+....++ ..
T Consensus 31 ~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~ 110 (444)
T PRK09669 31 FLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKII 110 (444)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHH
Confidence 34666788899999999999999999999999999999999 666 45565676666666554433332 34
Q ss_pred HHHHHHHhhhhHHHHHHHhHHHHHhhhc-ccCchhhHHHHHHHHhhhhhhccc
Q 039580 96 QVAVSRGLNGIGLAIVTLAIQSLVADST-DESNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 96 ~~~~~~~~~G~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~igp 147 (149)
.+.+...+.+.+.........++..|+. ++++|.+..+.......+|..+++
T Consensus 111 ~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~ 163 (444)
T PRK09669 111 YACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVS 163 (444)
T ss_pred HHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555566667777777777788999987 568899888887777777766554
No 181
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.14 E-value=1.8e-09 Score=80.37 Aligned_cols=140 Identities=14% Similarity=0.141 Sum_probs=99.8
Q ss_pred HHHHHHHHHHHhhhcccccchHHH-HhhcCCCcc----hhhHHHHHHHHHHHhhhhhHhH----hhhh-ccchHHH--HH
Q 039580 9 VLVNLAGIMERADESLLPGVYKEV-GAALCTDPT----GLGSLTLFRSIVQSSCYPLAAY----LSVH-HNCAHII--AL 76 (149)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~g~----l~dr-~g~~~~~--~~ 76 (149)
..+.+........+.-..+..+.+ .++.+.+.. ..++..+.+.+...+.+|+..+ +.|| .+++... .+
T Consensus 275 l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~ 354 (475)
T TIGR00924 275 IVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTL 354 (475)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHH
Confidence 333444444444443444434444 444444322 2678888888888888887654 4444 3333433 67
Q ss_pred HHHHHHHHHHHHHH---------hhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccc
Q 039580 77 GAFLWAAATFLVAI---------STTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 77 ~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp 147 (149)
|.++.+++.....+ ..|+++++...++.++|+....|..++++.+..|++.|++++|++.....+|..+++
T Consensus 355 G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~ 434 (475)
T TIGR00924 355 GMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGG 434 (475)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78887777766554 458888999999999999999999999999999999999999999999999888875
Q ss_pred c
Q 039580 148 L 148 (149)
Q Consensus 148 ~ 148 (149)
.
T Consensus 435 ~ 435 (475)
T TIGR00924 435 Y 435 (475)
T ss_pred H
Confidence 3
No 182
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.13 E-value=4.8e-09 Score=76.01 Aligned_cols=115 Identities=13% Similarity=0.004 Sum_probs=79.2
Q ss_pred HHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhhhHHHH
Q 039580 31 EVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSRGLNGIGLAI 110 (149)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 110 (149)
...+++|.++.+.+...+...++..++.++.+++.||+|||+.+..+.....++.....+.++.+.......+.+.+.+.
T Consensus 229 ~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~ 308 (392)
T PRK10473 229 LLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSV 308 (392)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567899999999999999999999999999999999999999998888887777666665555444444444444444
Q ss_pred HHHhHHHHHhhhcccCch-hhHHHHHHHHhhhhhhccc
Q 039580 111 VTLAIQSLVADSTDESNR-GMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 111 ~~~~~~~~~~~~~~~~~r-~~~~~~~~~~~~~g~~igp 147 (149)
..+.. ...+..|.++| +...+...+...+|..+++
T Consensus 309 ~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~ 344 (392)
T PRK10473 309 GFGVA--MSQALGPFSLRAGVASSTLGIAQVCGSSLWI 344 (392)
T ss_pred HhHHH--HHHHhccCcccccHHHHHHHHHHHHHHHHHH
Confidence 44332 22334444434 5555555555556665554
No 183
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.10 E-value=5.7e-10 Score=82.99 Aligned_cols=136 Identities=15% Similarity=0.163 Sum_probs=97.9
Q ss_pred HHHHHHHHHHhhhccccc-chHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhh----hccc-hHHHHHHHHHHHH
Q 039580 10 LVNLAGIMERADESLLPG-VYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSV----HHNC-AHIIALGAFLWAA 83 (149)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~g~-~~~~~~~~~~~~~ 83 (149)
...++.+........... +..++.+.+|+++.++|.+....-+..++..|+.|+++| |+|| |+.+.++....++
T Consensus 10 ~yg~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i 89 (473)
T PRK10429 10 SYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSV 89 (473)
T ss_pred hhccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHH
Confidence 334444445555554444 455667778999999999999999999999999999999 5698 5666677777777
Q ss_pred HHHHHHHhhh------hHHHHHHHHhhhhHHHHHHHhHHHHHhhhc-ccCchhhHHHHHHHHhhhhhhc
Q 039580 84 ATFLVAISTT------FFQVAVSRGLNGIGLAIVTLAIQSLVADST-DESNRGMAFGWLQLTGNFGSII 145 (149)
Q Consensus 84 ~~~~~~~~~~------~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~i 145 (149)
...+....++ ...+.+...+.+++.........++..|.. ++++|.+..+.-....++|..+
T Consensus 90 ~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~ 158 (473)
T PRK10429 90 VLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFV 158 (473)
T ss_pred HHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 6554433221 233445556677788888888899999998 6999999888866655655433
No 184
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.10 E-value=2.5e-09 Score=79.07 Aligned_cols=140 Identities=9% Similarity=0.056 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHH
Q 039580 7 TMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATF 86 (149)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 86 (149)
..+.+++.+++....+..++...|++.++ +.+............+...+..|+.|+++||+|+||++.++.....+...
T Consensus 253 ~~Wllslly~~tFG~fvg~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~ 331 (462)
T PRK15034 253 HLWLLSLLYLATFGSFIGFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSA 331 (462)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHH
Confidence 34566666666666666666667766544 22333333334455677889999999999999999999988877666553
Q ss_pred H-HHHh-----hhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhccc---------------------CchhhHHHHHHHHh
Q 039580 87 L-VAIS-----TTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDE---------------------SNRGMAFGWLQLTG 139 (149)
Q Consensus 87 ~-~~~~-----~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~---------------------~~r~~~~~~~~~~~ 139 (149)
. .... .+.+.+.+......++.|........++.+.+|+ ++-|.+.|+.....
T Consensus 332 ~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G 411 (462)
T PRK15034 332 LLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIG 411 (462)
T ss_pred HHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHH
Confidence 2 2222 2455555555555555566666667777777764 14566777777777
Q ss_pred hhhhhccc
Q 039580 140 NFGSIIGG 147 (149)
Q Consensus 140 ~~g~~igp 147 (149)
.+|..+-|
T Consensus 412 ~~Ggf~~p 419 (462)
T PRK15034 412 AVGGFFIP 419 (462)
T ss_pred Hcccchhh
Confidence 77666555
No 185
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.09 E-value=7.9e-09 Score=73.29 Aligned_cols=105 Identities=12% Similarity=0.065 Sum_probs=87.0
Q ss_pred HHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhh
Q 039580 15 GIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTF 94 (149)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (149)
+......-...++..-.+.+++|.++.|++...........+..++.|.++||+|||+..+..+++.+++++ ....+++
T Consensus 43 Y~La~~aDWLQGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl-~k~~~~~ 121 (354)
T PF05631_consen 43 YLLAMAADWLQGPYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL-TKHSSNY 121 (354)
T ss_pred HHHHHHHHHhhcchhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-HHhcccc
Confidence 333333334455544344468999999999999999999999999999999999999999999999888886 4466899
Q ss_pred HHHHHHHHhhhhHHHHHHHhHHHHHh
Q 039580 95 FQVAVSRGLNGIGLAIVTLAIQSLVA 120 (149)
Q Consensus 95 ~~~~~~~~~~G~~~~~~~~~~~~~~~ 120 (149)
..++++|++-|++.+..+.+-.+++.
T Consensus 122 ~~L~~GRvlgGiaTSLLfS~FEsW~V 147 (354)
T PF05631_consen 122 PVLLLGRVLGGIATSLLFSAFESWMV 147 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998888753
No 186
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=99.09 E-value=7.5e-09 Score=71.15 Aligned_cols=133 Identities=21% Similarity=0.255 Sum_probs=103.8
Q ss_pred HHHHHhhhcccccchHHHHhhcCCCc--chhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhh
Q 039580 15 GIMERADESLLPGVYKEVGAALCTDP--TGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAIST 92 (149)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~ 92 (149)
.+....+........+.+.++.+.+. .+.++..+.+.+...++.++.|++.||+|||+.+..+......+.....+.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~ 90 (338)
T COG0477 11 ALLLGLDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAP 90 (338)
T ss_pred HHHHHHhcchHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCc
Confidence 33333444555566777777777666 4789999999999999999999999999999888877765455555555555
Q ss_pred h--hHHHHHHHHhhhhHHHHHHHhHHHHHhhhccc-CchhhHHHHHHH-Hhhhhhhccc
Q 039580 93 T--FFQVAVSRGLNGIGLAIVTLAIQSLVADSTDE-SNRGMAFGWLQL-TGNFGSIIGG 147 (149)
Q Consensus 93 ~--~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~-~~~~g~~igp 147 (149)
+ .+.+.+.|..+|++.+...+...+++.|..|+ ++|+...+.... ...+|..++|
T Consensus 91 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (338)
T COG0477 91 NVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGP 149 (338)
T ss_pred cchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 88888999999999999999999999999987 688888888777 4666666654
No 187
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.07 E-value=6.9e-09 Score=75.25 Aligned_cols=140 Identities=13% Similarity=-0.020 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHH--HHHHHHHHhhhhhHh-HhhhhccchHHHHHHHHHH-HH
Q 039580 8 MVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLT--LFRSIVQSSCYPLAA-YLSVHHNCAHIIALGAFLW-AA 83 (149)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g-~l~dr~g~~~~~~~~~~~~-~~ 83 (149)
...+...++.+........+..|.+.+|.|.|.++.|... ........+.+|+.. +..||+||||..+...... ..
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~ 82 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSA 82 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHH
Confidence 3455566788888888888999999999999999999973 556777778888884 4799999998876555332 22
Q ss_pred HHHHHH---Hhhh-hHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccc
Q 039580 84 ATFLVA---ISTT-FFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 84 ~~~~~~---~~~~-~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp 147 (149)
...... ...+ ...+.....+..+..+...+...++..|..++++++.+.+....+..+|..+|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~ 150 (390)
T TIGR02718 83 CLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGG 150 (390)
T ss_pred HHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHH
Confidence 222222 1222 333344455566667777788888889999888888888888777788877775
No 188
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.07 E-value=8.3e-09 Score=74.48 Aligned_cols=144 Identities=15% Similarity=0.065 Sum_probs=112.8
Q ss_pred cchHHHHHHHHHHHHHhhhcccccchHHH-HhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhc--cchHHHH-HHHH
Q 039580 4 ETLTMVLVNLAGIMERADESLLPGVYKEV-GAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHH--NCAHIIA-LGAF 79 (149)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--g~~~~~~-~~~~ 79 (149)
+++.++.+++.+++....++..+-..|.+ .|+.|.|.....+..+.+=++..++++++|+++||. |||...- +.++
T Consensus 250 ~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~ 329 (448)
T COG2271 250 KNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFML 329 (448)
T ss_pred cChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHH
Confidence 46678889999999999988877776655 677899999999999999999999999999999998 4444433 3333
Q ss_pred HHHHHHHHHHHhh--hhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhh-hhhccc
Q 039580 80 LWAAATFLVAIST--TFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNF-GSIIGG 147 (149)
Q Consensus 80 ~~~~~~~~~~~~~--~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~igp 147 (149)
...++....-.++ |++...++.+..|+..-+.+-.......|..|++--|++.|+......+ |.+.+.
T Consensus 330 ~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~ 400 (448)
T COG2271 330 LITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAG 400 (448)
T ss_pred HHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcC
Confidence 3344444444444 4577778888999888778877778889999999999999998888777 666554
No 189
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.06 E-value=1e-08 Score=74.65 Aligned_cols=107 Identities=13% Similarity=0.066 Sum_probs=74.0
Q ss_pred hHHHHhhcCCCcchhhHHHHHHH-HHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHH---HHh-hhhHHHHHHHH-
Q 039580 29 YKEVGAALCTDPTGLGSLTLFRS-IVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLV---AIS-TTFFQVAVSRG- 102 (149)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~- 102 (149)
.+.+.+++|.++++.+++..... .+..++.++.+++.||+|+|+.+..+.....+..... ... ++.+.+.+...
T Consensus 233 ~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 312 (402)
T PRK11902 233 TTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGI 312 (402)
T ss_pred HHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Confidence 45567779999999999886554 5688999999999999999998877666555443322 333 35555555443
Q ss_pred ---hhhhHHHHHHHhHHHHHhhhcccCchhhHHHHH
Q 039580 103 ---LNGIGLAIVTLAIQSLVADSTDESNRGMAFGWL 135 (149)
Q Consensus 103 ---~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 135 (149)
..|++.+...+....+..+.+|+++++...+..
T Consensus 313 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (402)
T PRK11902 313 ENLCGGMGTAAFVALLMALCNRSFSATQYALLSALA 348 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHH
Confidence 455556666777777788888777766544443
No 190
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.06 E-value=9.3e-09 Score=74.59 Aligned_cols=117 Identities=15% Similarity=0.027 Sum_probs=85.9
Q ss_pred HHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHH-HHHHHHHH--hhhhHHHHHHHHhhhhH
Q 039580 31 EVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWA-AATFLVAI--STTFFQVAVSRGLNGIG 107 (149)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~G~~ 107 (149)
.+.+.+|.++.+.++......++..++..+.+++.||++++........... +....... ..+.+.+.....+.|.+
T Consensus 233 ~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 312 (394)
T PRK11652 233 LMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFG 312 (394)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHH
Confidence 4445589999999999888889999999999999999984333322222211 11111111 23556677778889999
Q ss_pred HHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 108 LAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
.+...+...+...|..| +++++..++.+....+|..+++.
T Consensus 313 ~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~ 352 (394)
T PRK11652 313 AGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAAL 352 (394)
T ss_pred HHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999885 68899999999888888888764
No 191
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.06 E-value=4.1e-10 Score=82.53 Aligned_cols=144 Identities=19% Similarity=0.157 Sum_probs=114.9
Q ss_pred chHHHHHHHHHHHHHhhhccccc-chHHHHhhcC----CCcchhhHHHHHHHHHHHhhhhhHhHhhhhc-cchHHHHHHH
Q 039580 5 TLTMVLVNLAGIMERADESLLPG-VYKEVGAALC----TDPTGLGSLTLFRSIVQSSCYPLAAYLSVHH-NCAHIIALGA 78 (149)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~ 78 (149)
.+.+..++..-+-+-+.++.+-. +..++..+++ +|.+++.-..+.|.--.=....+.||++||+ |+|+.+..+.
T Consensus 20 Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGa 99 (498)
T COG3104 20 PRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGA 99 (498)
T ss_pred CchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHH
Confidence 44555666666677777665544 4555566666 8888887777777666667788999999997 9999999999
Q ss_pred HHHHHHHHHHHHhh--hhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccC--chhhHHHHHHHHhhhhhhcccc
Q 039580 79 FLWAAATFLVAIST--TFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDES--NRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 79 ~~~~~~~~~~~~~~--~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~igp~ 148 (149)
++..++-+..+.++ +...+.++..+.++|.|..-+...+++.|.+|++ +|-..++++.++-++|+.++|+
T Consensus 100 il~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~ 173 (498)
T COG3104 100 ILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPI 173 (498)
T ss_pred HHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHH
Confidence 99999999888774 7888899999999999999999999999999754 3667777888888888888775
No 192
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.05 E-value=8.3e-09 Score=75.55 Aligned_cols=135 Identities=8% Similarity=-0.059 Sum_probs=93.4
Q ss_pred HHHHHHHHHhhhcccccchHHHHhhc--CCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHH
Q 039580 11 VNLAGIMERADESLLPGVYKEVGAAL--CTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLV 88 (149)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~ 88 (149)
..+..++..........+.+.+.++. +.+....+...+.+.....++.++.+++.||+++|+++.+......+..+..
T Consensus 237 ~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~ 316 (410)
T TIGR00885 237 GVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGS 316 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence 33444444444433445566665554 3344444556666677888999999999999999999888888877777777
Q ss_pred HHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 89 AISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 89 ~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
...++... .....+.|++.+..+|...++..+..+++.+....++... .+|..+.|+
T Consensus 317 ~~~~~~~~-~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~--~~Gga~~p~ 373 (410)
T TIGR00885 317 IFAGGHVG-LYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMA--IIGGGIVPP 373 (410)
T ss_pred HHcCChHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHH--HhccchHHH
Confidence 67666443 5677888899999999999999999976665333333332 377777764
No 193
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.01 E-value=2.5e-08 Score=73.92 Aligned_cols=123 Identities=15% Similarity=0.000 Sum_probs=92.2
Q ss_pred hcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHh---hhh---H
Q 039580 22 ESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAIS---TTF---F 95 (149)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~---~~~---~ 95 (149)
......+..++.++.|.+..+..++.........+.+.++..+.||+|||+.++.+..++.+..+.+... .+. |
T Consensus 286 i~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~ 365 (485)
T KOG0569|consen 286 INAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSW 365 (485)
T ss_pred cceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 3444555677788899999999999999999999999999999999999999999998887776554432 111 1
Q ss_pred H---HHHHHHhhhhHHHH-HHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhh
Q 039580 96 Q---VAVSRGLNGIGLAI-VTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSI 144 (149)
Q Consensus 96 ~---~~~~~~~~G~~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 144 (149)
. .++..++..+..+. ..|...-+.+|++|++.|+.++++......+...
T Consensus 366 ~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~f 418 (485)
T KOG0569|consen 366 LSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNF 418 (485)
T ss_pred HHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHH
Confidence 1 22334444443332 4577788899999999999999987766665543
No 194
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.00 E-value=1.6e-08 Score=75.87 Aligned_cols=104 Identities=17% Similarity=0.178 Sum_probs=84.7
Q ss_pred hhHHHHHHHHHHHhhhhhH----hHhhhhccchHHHHHHHHHHHHHHHHHHHhhh---------hHHHHHHHHhhhhHHH
Q 039580 43 LGSLTLFRSIVQSSCYPLA----AYLSVHHNCAHIIALGAFLWAAATFLVAISTT---------FFQVAVSRGLNGIGLA 109 (149)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~----g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~G~~~~ 109 (149)
.+++.+.+.+...+..|+. +++.||+++++.+.+++.+.+++........+ .++.....++.|+++.
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~ 397 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGEL 397 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHH
Confidence 5677777777667776666 66677777778888999999999877666544 4578888999999999
Q ss_pred HHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcc
Q 039580 110 IVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIG 146 (149)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig 146 (149)
...|...+++.+..|++.|++++|.+.....+|..++
T Consensus 398 ~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~ 434 (500)
T PRK09584 398 MISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIA 434 (500)
T ss_pred HHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999886666666554
No 195
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.00 E-value=6.1e-09 Score=77.49 Aligned_cols=123 Identities=13% Similarity=0.036 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhcc-----chHHHHHHHHHH
Q 039580 7 TMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHN-----CAHIIALGAFLW 81 (149)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g-----~~~~~~~~~~~~ 81 (149)
........++.............|.+.+++|.|+.+.+...+...+...+ .+++|.++||++ ||+.+..+.++.
T Consensus 27 ~~~~~~~~y~~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~-K~l~g~l~D~~~i~G~rRr~~l~~~~~l~ 105 (468)
T TIGR00788 27 VLAIGLQVLFVKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWAL-KPFAGVMSDTFPLFGYTKRWYLVLSGLLG 105 (468)
T ss_pred HHHHHHHHHHHhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCCCccchHHHHHHHHHH
Confidence 34455556777777733444556777778999999999999999998888 455999999997 677777766555
Q ss_pred H-HHHHHHHHhhhhHHHH-HHHHhhhhHHHHHHHhHHHHHhhhcccCchhhH
Q 039580 82 A-AATFLVAISTTFFQVA-VSRGLNGIGLAIVTLAIQSLVADSTDESNRGMA 131 (149)
Q Consensus 82 ~-~~~~~~~~~~~~~~~~-~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~ 131 (149)
. +........++..... +..++.+++.+...++..++..|..+ |++...
T Consensus 106 ~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~ 156 (468)
T TIGR00788 106 SAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAG 156 (468)
T ss_pred HHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcC
Confidence 2 3333333334433333 47888999999999999999999997 555443
No 196
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.00 E-value=9.7e-09 Score=74.95 Aligned_cols=112 Identities=16% Similarity=0.051 Sum_probs=90.7
Q ss_pred HHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhcc-chHHHHHHHHHHHHHHHHHHHh
Q 039580 13 LAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHN-CAHIIALGAFLWAAATFLVAIS 91 (149)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g-~~~~~~~~~~~~~~~~~~~~~~ 91 (149)
..++..........+..+.+.++.|.|.+|+|.+.+...+...+.++++|.++||.+ +||.+.+..+..++........
T Consensus 9 ~~~f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~ 88 (400)
T PF03825_consen 9 LMYFLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFS 88 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 345555555556667778888999999999999999999999999999999999986 5777767666666666666677
Q ss_pred hhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcc
Q 039580 92 TTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTD 124 (149)
Q Consensus 92 ~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~ 124 (149)
++++.+.....+..+......|...++..+..+
T Consensus 89 ~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~ 121 (400)
T PF03825_consen 89 SSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG 121 (400)
T ss_pred ccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc
Confidence 888888888888888888888888888888764
No 197
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.98 E-value=6e-09 Score=75.67 Aligned_cols=144 Identities=11% Similarity=0.073 Sum_probs=105.0
Q ss_pred ccchHHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHH
Q 039580 3 SETLTMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWA 82 (149)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~ 82 (149)
+||..++...+.++......-.+.+...+..+-++ +.+...|...+|.+.+.+...++-|+.||+|-|.....+....+
T Consensus 42 rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~ 120 (480)
T KOG2563|consen 42 RRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNG 120 (480)
T ss_pred hHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHH
Confidence 34444444444443333333333334444445566 77778899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhh------hhH--HHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccc
Q 039580 83 AATFLVAIST------TFF--QVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 83 ~~~~~~~~~~------~~~--~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp 147 (149)
++...-..+. .++ ....++.+.+..+......-.-+...|+++++|..+..+-.++..+|.++|-
T Consensus 121 iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~ 193 (480)
T KOG2563|consen 121 IGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGF 193 (480)
T ss_pred HHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHh
Confidence 9887655432 334 4557778887777777666667788999999999999998887777776653
No 198
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.97 E-value=1.4e-09 Score=77.58 Aligned_cols=138 Identities=12% Similarity=0.017 Sum_probs=114.7
Q ss_pred HHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHH
Q 039580 7 TMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATF 86 (149)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 86 (149)
...................+.+.|...+.++.+.-+..++......+..+++..+|..+|++|||+.+.......++.-+
T Consensus 79 l~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~ 158 (528)
T KOG0253|consen 79 LFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGV 158 (528)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHH
Confidence 33444444555555555556667888888999999999999999999999999999999999999999998888888888
Q ss_pred HHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcc
Q 039580 87 LVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIG 146 (149)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig 146 (149)
....++|+..+++.|.+.|.|.|+ .|...++-.|..|..+|..-+-.. ..+.+|.+..
T Consensus 159 is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~e 216 (528)
T KOG0253|consen 159 ISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFE 216 (528)
T ss_pred hhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHH
Confidence 888999999999999999999998 899999999999999998766554 6666666543
No 199
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.96 E-value=2.1e-08 Score=74.29 Aligned_cols=141 Identities=15% Similarity=0.090 Sum_probs=90.3
Q ss_pred HHHHHHHHHHHHHhhhcccccchHHH-HhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHH--------HHH
Q 039580 7 TMVLVNLAGIMERADESLLPGVYKEV-GAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHII--------ALG 77 (149)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~--------~~~ 77 (149)
.++...+..+.............|.+ .+++|.+..+.++..+...++..++.++.|+++||.++|+.. ..+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 341 (465)
T TIGR00894 262 PVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNG 341 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Confidence 34555556666666555555666666 566899999999999999999999999999999998654221 111
Q ss_pred HHHHHHH--HHHHHH-hhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 78 AFLWAAA--TFLVAI-STTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 78 ~~~~~~~--~~~~~~-~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
....... .+.... ..+....++...+.+.+.+...+.......|.. ++.+|...++.+....+|..++|.
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~l~~~i~p~ 414 (465)
T TIGR00894 342 IGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLA-PRFLGFIKGITGLPGFIGGLIAST 414 (465)
T ss_pred HHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcC-hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111 111112 223344444445555555545555445555666 458999999999999999888875
No 200
>PRK11462 putative transporter; Provisional
Probab=98.94 E-value=5.1e-08 Score=72.47 Aligned_cols=137 Identities=16% Similarity=0.082 Sum_probs=79.9
Q ss_pred HHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHH
Q 039580 11 VNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAI 90 (149)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~ 90 (149)
+....+..............++.+....+++..+.+...+.++.+++.+++++++||+++|+.+..+....++......+
T Consensus 233 l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~ 312 (460)
T PRK11462 233 VGLLTIFNILAVCVRGGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFF 312 (460)
T ss_pred HHHHHHHHHHHHHHHHhHhhhhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 33334444444333333444444433334445566777888888999999999999999999877555444433333222
Q ss_pred h--hhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcc-------cCchhhHHHHHHHHhhhhhhccc
Q 039580 91 S--TTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTD-------ESNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 91 ~--~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-------~~~r~~~~~~~~~~~~~g~~igp 147 (149)
. ++.+...+..++.|++.+...+...+++.|..+ +++.|...+.......+|..+|+
T Consensus 313 ~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~ 378 (460)
T PRK11462 313 VPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGG 378 (460)
T ss_pred hchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHH
Confidence 2 223334445566777777666666777777665 22234444555556666666554
No 201
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.94 E-value=2.4e-08 Score=74.71 Aligned_cols=105 Identities=16% Similarity=0.194 Sum_probs=83.9
Q ss_pred hhHHHHHHHHHHHhhhhhHhHhhhhccchH-------HHHHHHHHHHHHHHHH-----HHh-----hhhHHHHHHHHhhh
Q 039580 43 LGSLTLFRSIVQSSCYPLAAYLSVHHNCAH-------IIALGAFLWAAATFLV-----AIS-----TTFFQVAVSRGLNG 105 (149)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~-------~~~~~~~~~~~~~~~~-----~~~-----~~~~~~~~~~~~~G 105 (149)
..++.+.+.+...+..|+.+++.||.++|+ .+.+|.++.+++.... ... .+.+.+....++.|
T Consensus 311 ~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g 390 (489)
T PRK10207 311 PVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQS 390 (489)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHH
Confidence 355556667777789999999999999886 3667777766665422 111 24677778889999
Q ss_pred hHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccc
Q 039580 106 IGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp 147 (149)
+|++...+..++.+.+..|++.++.++|+++....+|..+|.
T Consensus 391 ~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~ 432 (489)
T PRK10207 391 LGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGG 432 (489)
T ss_pred HHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999988888887764
No 202
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.92 E-value=1.7e-09 Score=77.11 Aligned_cols=102 Identities=13% Similarity=0.064 Sum_probs=86.4
Q ss_pred HHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCc
Q 039580 48 LFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESN 127 (149)
Q Consensus 48 ~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 127 (149)
.+..+....+.++.+++.||+|||+.+...++.+++..+....+.+.....+..+..-++.++.+.+.+.+..|.+|...
T Consensus 388 litslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTav 467 (528)
T KOG0253|consen 388 LITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAV 467 (528)
T ss_pred HHHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhh
Confidence 34467778999999999999999999999999999988877776665555556666666777788888999999999999
Q ss_pred hhhHHHHHHHHhhhhhhccccC
Q 039580 128 RGMAFGWLQLTGNFGSIIGGLC 149 (149)
Q Consensus 128 r~~~~~~~~~~~~~g~~igp~~ 149 (149)
|+++.|..+....+|.++.|++
T Consensus 468 RatgvGtcSsmaRIggI~~p~i 489 (528)
T KOG0253|consen 468 RATGVGTCSSMARIGGIFSPVI 489 (528)
T ss_pred hhcchhhhhhHHhhhhhhhhHH
Confidence 9999999999999999998853
No 203
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.92 E-value=1e-08 Score=58.23 Aligned_cols=79 Identities=15% Similarity=0.053 Sum_probs=71.4
Q ss_pred HhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHH
Q 039580 19 RADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQV 97 (149)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (149)
...+..+.+..|.+++|.++|.++.+++.+.+.+++.++.+...++.++..+++.+..+.+...+....+.+.++.+.+
T Consensus 5 GigRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w 83 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLW 83 (85)
T ss_pred hhHHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence 3455667889999999999999999999999999999999999999999888999999999999999999888887654
No 204
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.90 E-value=3.5e-08 Score=68.45 Aligned_cols=140 Identities=12% Similarity=0.074 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHHHhhhcccccc-hHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHH-
Q 039580 7 TMVLVNLAGIMERADESLLPGV-YKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAA- 84 (149)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~- 84 (149)
.++.+....+.......=+... ...+++.+|+|+.+.+.+.+..-...++..|+.|.++||+|++-..........+.
T Consensus 265 pfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~ 344 (459)
T KOG4686|consen 265 PFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLG 344 (459)
T ss_pred cHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHH
Confidence 4444444444444333222222 44567889999999999998888888999999999999999988776655443332
Q ss_pred HHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 85 TFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
-....+ +.+.=+....+.|+..+...-.....++...|+++.|++.|..+...++|-++-|.
T Consensus 345 H~~l~F--t~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~I 406 (459)
T KOG4686|consen 345 HSGLFF--TFLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPI 406 (459)
T ss_pred hhhHHh--hhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhh
Confidence 222222 33333455667777766655556667888899999999999999999999887665
No 205
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.87 E-value=9e-08 Score=60.94 Aligned_cols=99 Identities=14% Similarity=0.061 Sum_probs=81.7
Q ss_pred HHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCc
Q 039580 48 LFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESN 127 (149)
Q Consensus 48 ~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 127 (149)
++.-....+.+++.+.+.++.|.|+.+.++.+...+-... .+.++.+.++..-.+.|++.+..+++...++.+..++++
T Consensus 44 ai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~-~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~ 122 (156)
T PF05978_consen 44 AILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIAS-FFYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEET 122 (156)
T ss_pred HHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHH
Confidence 4444556677788889999999999999998887754443 356778888999999999999999999999999999999
Q ss_pred hhhHHHHHHHHhhhhhhccc
Q 039580 128 RGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 128 r~~~~~~~~~~~~~g~~igp 147 (149)
|++..+++-.....+..+|+
T Consensus 123 ~~~~~~ifw~i~~~s~i~G~ 142 (156)
T PF05978_consen 123 IGRNTGIFWAIFQSSLIFGN 142 (156)
T ss_pred HhhHHHHHHHHHHHHHHHHH
Confidence 99999987766666666664
No 206
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.84 E-value=1.8e-08 Score=74.95 Aligned_cols=116 Identities=11% Similarity=0.065 Sum_probs=98.5
Q ss_pred HhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHH----------hhhhHHHHHHHH
Q 039580 33 GAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAI----------STTFFQVAVSRG 102 (149)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~ 102 (149)
.+.+|.++.+.|.......++..++....+++.+|++.|+++.++.++.+++...... .++.+.+.....
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~ 359 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSI 359 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhH
Confidence 3578999999999999999999999999999999999999999999888887644321 133344556678
Q ss_pred hhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 103 LNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 103 ~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
+.+++.+..+.....++++..|++++++..++.+...++|..+++.
T Consensus 360 l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~ 405 (468)
T TIGR00788 360 IAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGF 405 (468)
T ss_pred HHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHH
Confidence 8888888889899999999999999999999999999999888764
No 207
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.84 E-value=2.9e-08 Score=55.75 Aligned_cols=68 Identities=19% Similarity=0.198 Sum_probs=57.5
Q ss_pred HHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHH
Q 039580 13 LAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFL 80 (149)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~ 80 (149)
..++..........++.|.+.++.|+|+.|.|.+.++..+...++.|++|.++||+++++........
T Consensus 7 ~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 7 AFYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 44555666666777788888888999999999999999999999999999999999998887765544
No 208
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.81 E-value=1.9e-07 Score=66.47 Aligned_cols=142 Identities=14% Similarity=0.036 Sum_probs=104.3
Q ss_pred hHHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhc-cchHHHHHHHHHHHHH
Q 039580 6 LTMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHH-NCAHIIALGAFLWAAA 84 (149)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~ 84 (149)
+..+.+.+..-.+...++....+.|.+..|.|+|+.+.|+..+...+...+.+.....+++|. ++|+.......+..++
T Consensus 208 ~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G 287 (395)
T COG2807 208 PLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVG 287 (395)
T ss_pred chhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHH
Confidence 344556666666777777788889999999999999999999999999999999999999965 5677777777777777
Q ss_pred HHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcc-cCchhhHHHHHHHHhhhhhhcccc
Q 039580 85 TFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTD-ESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
...+.+.+....+.- .++.|+|.|..++....++.+..+ +++-++..+..+....+=...||+
T Consensus 288 ~~G~~~~P~~~~~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~ 351 (395)
T COG2807 288 LVGLLLAPGQLPILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPW 351 (395)
T ss_pred HHHHHHhhhhHHHHH-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhh
Confidence 766666553322222 488999999999999999887764 444455555544444443444543
No 209
>PRK09848 glucuronide transporter; Provisional
Probab=98.80 E-value=8.8e-08 Score=70.79 Aligned_cols=125 Identities=10% Similarity=0.026 Sum_probs=83.1
Q ss_pred HHHHHHHhhhcccc-cchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhc----cchHHH-HHHHHHHHHHHH
Q 039580 13 LAGIMERADESLLP-GVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHH----NCAHII-ALGAFLWAAATF 86 (149)
Q Consensus 13 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~----g~~~~~-~~~~~~~~~~~~ 86 (149)
+..+.......... .+.+++.+++|+++.++|.+.....+..++..|+.|+++||. ||||.. .++.+...+...
T Consensus 15 ~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~ 94 (448)
T PRK09848 15 LGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSV 94 (448)
T ss_pred cchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHH
Confidence 34444444444333 345566777899999999999999999999999999999996 666644 555554444333
Q ss_pred HH-HHh----h--hhHHHHHHHHhhhhHHHHHHHhHHHHHhhhc-ccCchhhHHHHHHH
Q 039580 87 LV-AIS----T--TFFQVAVSRGLNGIGLAIVTLAIQSLVADST-DESNRGMAFGWLQL 137 (149)
Q Consensus 87 ~~-~~~----~--~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~ 137 (149)
+. ... + ..........+.+++.+...+...++..+.. ++++|.+..+.-..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~ 153 (448)
T PRK09848 95 LVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGI 153 (448)
T ss_pred HHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHH
Confidence 32 111 1 1222344556778888888888888877765 45678887665543
No 210
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.78 E-value=3.6e-08 Score=71.74 Aligned_cols=121 Identities=7% Similarity=-0.009 Sum_probs=77.2
Q ss_pred ccchHHHHHHHHHHHHHhhhcccccchHHHHh-hcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHH
Q 039580 3 SETLTMVLVNLAGIMERADESLLPGVYKEVGA-ALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLW 81 (149)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~ 81 (149)
.|++..+.....++.....+....++.|.+.+ +.|+|++|.|.+.+...+...+.+|+.|.++||.|.||.+++.....
T Consensus 4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l 83 (412)
T PF01306_consen 4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAIL 83 (412)
T ss_dssp CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHH
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHH
Confidence 45556666666777777777777777676665 58999999999999999999999999999999999777655443322
Q ss_pred H---HHHHHHHH----hhhhH-HHHHHHHhhhhHHHHHHHhHHHHHhhhc
Q 039580 82 A---AATFLVAI----STTFF-QVAVSRGLNGIGLAIVTLAIQSLVADST 123 (149)
Q Consensus 82 ~---~~~~~~~~----~~~~~-~~~~~~~~~G~~~~~~~~~~~~~~~~~~ 123 (149)
. .+.....+ ..|.+ ..+++-...++......|...++..+..
T Consensus 84 ~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s 133 (412)
T PF01306_consen 84 LLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS 133 (412)
T ss_dssp HHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH
Confidence 2 22222212 23332 2333344455555566666666665554
No 211
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.73 E-value=1.9e-09 Score=74.50 Aligned_cols=136 Identities=13% Similarity=0.067 Sum_probs=102.9
Q ss_pred HHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhc-cchHHHHHHHHHHHHHHHHH
Q 039580 10 LVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHH-NCAHIIALGAFLWAAATFLV 88 (149)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~ 88 (149)
..++..+...+.+..-.....++..+.+.+.++..++.+.|+....+...+.|++.||. |-|..-++-++...++-+.+
T Consensus 48 ~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliF 127 (459)
T KOG4686|consen 48 FMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIF 127 (459)
T ss_pred HHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHH
Confidence 33444444444444444555666677777888888999999999999999999999985 44444444444444444333
Q ss_pred ---HHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhc
Q 039580 89 ---AISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSII 145 (149)
Q Consensus 89 ---~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i 145 (149)
...+.+|...++|++.|+|.--...+.+.+...+++.|+...++|+......+|+.+
T Consensus 128 a~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~Gstv 187 (459)
T KOG4686|consen 128 AAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTV 187 (459)
T ss_pred HhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhcee
Confidence 357899999999999999887788889999999999999999999998888888753
No 212
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.70 E-value=1.6e-07 Score=69.29 Aligned_cols=143 Identities=15% Similarity=0.148 Sum_probs=105.0
Q ss_pred chHHHHHHHHHHHHHhhhcccccchHHHHh-hcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHH
Q 039580 5 TLTMVLVNLAGIMERADESLLPGVYKEVGA-ALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAA 83 (149)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~ 83 (149)
++.+...++.+++........+...+++.+ .++.++.+..........+.+++.++..++.+|+|+|+++.++.++.++
T Consensus 235 Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i 314 (467)
T COG2211 235 NRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAV 314 (467)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHH
Confidence 344455555677777777777777777653 3566666777778888888888899999999999999999999999999
Q ss_pred HHHHHHHhh--hhHHHHHHHHhhhhHHHHHHHhHHHHHhhhccc-------CchhhHHHHHHHHhhhhhhccc
Q 039580 84 ATFLVAIST--TFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDE-------SNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 84 ~~~~~~~~~--~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~-------~~r~~~~~~~~~~~~~g~~igp 147 (149)
+....-+.+ +.+..++...+.+++.+...+...+.++|..+- ++-|...+......-+|.+++.
T Consensus 315 ~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~ 387 (467)
T COG2211 315 GYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAG 387 (467)
T ss_pred HHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHH
Confidence 887766654 677778888999999998888888887776542 2224445555555555555543
No 213
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.70 E-value=1.6e-08 Score=74.37 Aligned_cols=118 Identities=23% Similarity=0.244 Sum_probs=94.2
Q ss_pred cchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhh----hccchHH-HHHHHHHHHHHHHHHHHh-h-------h
Q 039580 27 GVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSV----HHNCAHI-IALGAFLWAAATFLVAIS-T-------T 93 (149)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~g~~~~-~~~~~~~~~~~~~~~~~~-~-------~ 93 (149)
...+++.+.+|+++...+.+.....+..++..|+.|.++| |+||||- +..+....+++..+.... + .
T Consensus 23 ~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~ 102 (428)
T PF13347_consen 23 YLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAK 102 (428)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhH
Confidence 4467778888999999999999999999999999999999 8997555 556777777777665544 3 1
Q ss_pred hHHHHHHHHhhhhHHHHHHHhHHHHHhhhcc-cCchhhHHHHHHHHhhhhhh
Q 039580 94 FFQVAVSRGLNGIGLAIVTLAIQSLVADSTD-ESNRGMAFGWLQLTGNFGSI 144 (149)
Q Consensus 94 ~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~ 144 (149)
.....+...+..++.........++..|..+ +++|.+..+.-+....+|..
T Consensus 103 ~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~ 154 (428)
T PF13347_consen 103 LVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSL 154 (428)
T ss_pred HHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHH
Confidence 2334566677788888888899999999997 57899999988777777774
No 214
>PRK11462 putative transporter; Provisional
Probab=98.68 E-value=2.8e-07 Score=68.58 Aligned_cols=135 Identities=11% Similarity=0.082 Sum_probs=99.0
Q ss_pred HHHHHHHhhhccccc-chHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhh----ccchH-HHHHHHHHHHHHHH
Q 039580 13 LAGIMERADESLLPG-VYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVH----HNCAH-IIALGAFLWAAATF 86 (149)
Q Consensus 13 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~g~~~-~~~~~~~~~~~~~~ 86 (149)
++-+........... +..++.+..|+++..+|.+....-+--++.-|+.|+++|| +|||| .+.++....++...
T Consensus 16 ~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~ 95 (460)
T PRK11462 16 MGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCV 95 (460)
T ss_pred cchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHH
Confidence 344444444444444 4555678899999999999999999999999999999997 57754 45566667777665
Q ss_pred HHHHhhh------hHHHHHHHHhhhhHHHHHHHhHHHHHhhhcc-cCchhhHHHHHHHHhhhhhhccc
Q 039580 87 LVAISTT------FFQVAVSRGLNGIGLAIVTLAIQSLVADSTD-ESNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 87 ~~~~~~~------~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~igp 147 (149)
++...++ ...+.+...+..++.........++..|..+ +|+|.+..++...+..+|..+++
T Consensus 96 llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~ 163 (460)
T PRK11462 96 LAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLST 163 (460)
T ss_pred HHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5433332 3345556666788888888888889999875 89999999998888888766553
No 215
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.68 E-value=1.3e-06 Score=63.76 Aligned_cols=107 Identities=12% Similarity=0.152 Sum_probs=90.7
Q ss_pred CcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHH
Q 039580 39 DPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSL 118 (149)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~ 118 (149)
++...|...+...+..++...+..++.+|+|.|+.++++.....+=....+++++++.+...+.+-++-.+.......-+
T Consensus 257 g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkY 336 (412)
T PF01306_consen 257 GNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKY 336 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44568888899999999999999999999999999999999999988899999999999999999999999999999999
Q ss_pred HhhhcccCchhhHHHHH-HHHhhhhhhc
Q 039580 119 VADSTDESNRGMAFGWL-QLTGNFGSII 145 (149)
Q Consensus 119 ~~~~~~~~~r~~~~~~~-~~~~~~g~~i 145 (149)
+.+.+|+|..++...+. +...++|..+
T Consensus 337 I~~~fd~rlsAt~y~v~~~~~~~~~~~i 364 (412)
T PF01306_consen 337 ITAHFDKRLSATLYLVGFQFAKQIGIII 364 (412)
T ss_dssp HHHHS-GGGHHHHHHHHHTTTHHHHHHH
T ss_pred HHHhCCHhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888888773 5555555544
No 216
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.68 E-value=2.4e-06 Score=61.83 Aligned_cols=128 Identities=20% Similarity=0.101 Sum_probs=104.3
Q ss_pred Hhhhcccccc-hHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhh-hccchHHHHHHHHHHHHHHHHHH---Hhhh
Q 039580 19 RADESLLPGV-YKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSV-HHNCAHIIALGAFLWAAATFLVA---ISTT 93 (149)
Q Consensus 19 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-r~g~~~~~~~~~~~~~~~~~~~~---~~~~ 93 (149)
...+.+...+ -|+=.+.+|++..|..........+..++....|++.. |.++++.-.+++....++..+.. ...+
T Consensus 221 t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~ 300 (403)
T PF03209_consen 221 TLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGS 300 (403)
T ss_pred HHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 3344444444 45557889999999999999999999999999998876 67888888888888877765543 4467
Q ss_pred hHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcc
Q 039580 94 FFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIG 146 (149)
Q Consensus 94 ~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig 146 (149)
.+.+....++.|++.|.......+.+.+..++++.|..+|.+...+.++..+|
T Consensus 301 ~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg 353 (403)
T PF03209_consen 301 PWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLG 353 (403)
T ss_pred chHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999999999999877776665544
No 217
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.66 E-value=7.5e-08 Score=71.55 Aligned_cols=116 Identities=22% Similarity=0.180 Sum_probs=102.7
Q ss_pred HhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhhhHHHHHH
Q 039580 33 GAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSRGLNGIGLAIVT 112 (149)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 112 (149)
.||++..+...|......-.+.++.-++.+++.+|+|+-+++..++....+=.+..+...|+|..+-..+++|+..+..+
T Consensus 398 led~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliW 477 (618)
T KOG3762|consen 398 LEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIW 477 (618)
T ss_pred HhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHH
Confidence 57888778888877788888888999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHHHHHhhhcccCchhhHHHHHH-----HHhhhhhhcccc
Q 039580 113 LAIQSLVADSTDESNRGMAFGWLQ-----LTGNFGSIIGGL 148 (149)
Q Consensus 113 ~~~~~~~~~~~~~~~r~~~~~~~~-----~~~~~g~~igp~ 148 (149)
.+..++++...||+-|.++.++.+ .+.++|+.||+.
T Consensus 478 aa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~ 518 (618)
T KOG3762|consen 478 AAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGF 518 (618)
T ss_pred HHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhh
Confidence 999999999999999999999863 445566666653
No 218
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.65 E-value=3.6e-09 Score=79.81 Aligned_cols=138 Identities=16% Similarity=0.229 Sum_probs=3.0
Q ss_pred HHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHH
Q 039580 10 LVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVA 89 (149)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~ 89 (149)
.+++..+.+..........+..+++.+++++.+.|++.+.+-++.++..++..++.+|..|-|.+-.+.++.+++.++++
T Consensus 7 ~~~~~~~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~ 86 (539)
T PF03137_consen 7 FLCLLGLFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFA 86 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHh
Confidence 34445555555555666778889999999999999999999999999999999999999888888999999988887654
Q ss_pred Hh----h----------------------------------------------hhHHHHHHHHhhhhHHHHHHHhHHHHH
Q 039580 90 IS----T----------------------------------------------TFFQVAVSRGLNGIGLAIVTLAIQSLV 119 (149)
Q Consensus 90 ~~----~----------------------------------------------~~~~~~~~~~~~G~~~~~~~~~~~~~~ 119 (149)
+. + -+..+++++++.|+|....++...+++
T Consensus 87 lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYi 166 (539)
T PF03137_consen 87 LPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYI 166 (539)
T ss_dssp -----------------------------------------------------------------SSS------------
T ss_pred ccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeee
Confidence 30 0 024577889999999999999999999
Q ss_pred hhhcccCchhhHHHHHHHHhhhhhhccc
Q 039580 120 ADSTDESNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 120 ~~~~~~~~r~~~~~~~~~~~~~g~~igp 147 (149)
.|..++++-+.+.|+......+|.++|-
T Consensus 167 DDnv~~~~splYiGi~~~~~~lGPa~Gf 194 (539)
T PF03137_consen 167 DDNVSKKNSPLYIGILYAMSILGPALGF 194 (539)
T ss_dssp ----------------------------
T ss_pred ccccccccCccchhhhhHHhhccHHHHH
Confidence 9999999999999999998888887763
No 219
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.58 E-value=2.9e-06 Score=63.98 Aligned_cols=136 Identities=8% Similarity=-0.084 Sum_probs=90.2
Q ss_pred chHHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHH
Q 039580 5 TLTMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAA 84 (149)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~ 84 (149)
++......+..+-..........+.+.+.+..+.+.+. .+......+...++..+...+.||+|||+.++.+...+.++
T Consensus 294 ~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~ 372 (513)
T KOG0254|consen 294 KRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSIC 372 (513)
T ss_pred HHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHH
Confidence 33444555555555555566677788888888876554 55556667777788888899999999999999999999988
Q ss_pred HHHHHHhhhh-------------HHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhh
Q 039580 85 TFLVAISTTF-------------FQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNF 141 (149)
Q Consensus 85 ~~~~~~~~~~-------------~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 141 (149)
.++.+..... ..+...............+....+.+|.+|.+.|+++.++......+
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~ 442 (513)
T KOG0254|consen 373 LVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWL 442 (513)
T ss_pred HHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHH
Confidence 8766542111 11111122222222223344446789999999999999886554444
No 220
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.57 E-value=5.1e-06 Score=60.98 Aligned_cols=137 Identities=7% Similarity=-0.055 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHhhhcccccchHHHH-hhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHH
Q 039580 8 MVLVNLAGIMERADESLLPGVYKEVG-AALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATF 86 (149)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~ 86 (149)
++...+................|.+. +.+|.++.+.++.......+..++..+.+++.+|..+++..........++..
T Consensus 220 ~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~ 299 (413)
T PRK15403 220 FLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLA 299 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHH
Confidence 33333333333333334444556554 55689999999998888888888888888876555554443332222222222
Q ss_pred HHH-----HhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhc
Q 039580 87 LVA-----ISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSII 145 (149)
Q Consensus 87 ~~~-----~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i 145 (149)
... ..++++..++...+.++|.+...|.......+. ++..+|++.++.+.....+...
T Consensus 300 l~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~p~~~~~al~~-~~~~~G~a~a~~~~~~~~~~~~ 362 (413)
T PRK15403 300 LLIVGNLLWPHVWLWSVLGTSLYAFGIGLIFPTLFRFTLFS-NNLPKGTVSASLNMVILMVMAV 362 (413)
T ss_pred HHHHHHHHccccHHHHHHHHHHHHHHHHHHhHHHHHHHhcc-CCCCCcHHHHHHHHHHHHHHHH
Confidence 211 123343456778888898888888777533222 2334688888766655444433
No 221
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.55 E-value=7.1e-07 Score=68.92 Aligned_cols=124 Identities=12% Similarity=0.049 Sum_probs=96.8
Q ss_pred cccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhc-cchHHHHHHHHHHHHHHHHHHHhhh--------hH
Q 039580 25 LPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHH-NCAHIIALGAFLWAAATFLVAISTT--------FF 95 (149)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~--------~~ 95 (149)
...+..++.+.+|.+.++...+...+....-+...+.|+++|++ |+++.+..+.++..++..+..+... ..
T Consensus 7 ~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~ 86 (654)
T TIGR00926 7 RTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDL 86 (654)
T ss_pred HHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHH
Confidence 34445666777899988888888888888888889999999986 9999999999988888877665321 22
Q ss_pred HHHHHHHhhhhHHHHHHHhHHHHHhhhcccCc---hhhHHHHHHHHhhhhhhcccc
Q 039580 96 QVAVSRGLNGIGLAIVTLAIQSLVADSTDESN---RGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 96 ~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~---r~~~~~~~~~~~~~g~~igp~ 148 (149)
..+.+..+..+|.|..-|+..+...|.+++++ |-+...++....++|+.+++.
T Consensus 87 ~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~ 142 (654)
T TIGR00926 87 LDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTI 142 (654)
T ss_pred HHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 35577788888999999999999999997653 566777778888888877643
No 222
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.54 E-value=6.3e-07 Score=64.62 Aligned_cols=126 Identities=13% Similarity=0.038 Sum_probs=94.8
Q ss_pred ccccchHH-HHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHH--HHHHHHHHHHHHHHHhhhhHHHHHH
Q 039580 24 LLPGVYKE-VGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIA--LGAFLWAAATFLVAISTTFFQVAVS 100 (149)
Q Consensus 24 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (149)
..-+.++. +.+.+..+.++.|......++.+.++..+.|.++||+++.+.+. .+....+.......+++++.++++-
T Consensus 288 fLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp 367 (464)
T KOG3764|consen 288 FLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWVP 367 (464)
T ss_pred HhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhhh
Confidence 33444444 45777877889999999999999999999999999999544433 3444445555566788999999988
Q ss_pred HHhhhhHHHHHHHhHHHHHhhhcccC------chhhHHHHHHHHhhhhhhccccC
Q 039580 101 RGLNGIGLAIVTLAIQSLVADSTDES------NRGMAFGWLQLTGNFGSIIGGLC 149 (149)
Q Consensus 101 ~~~~G~~~~~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~g~~igp~~ 149 (149)
+...+++.+..............+++ ..|...++...++++|..+||.+
T Consensus 368 ~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~ 422 (464)
T KOG3764|consen 368 NFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTF 422 (464)
T ss_pred hHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccc
Confidence 88888888777766666665555443 34678888899999999999863
No 223
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.53 E-value=1.5e-06 Score=62.74 Aligned_cols=140 Identities=14% Similarity=-0.028 Sum_probs=106.3
Q ss_pred chHHHHHHHHHHHHHhhhcccccchHHHHhh-cCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHH
Q 039580 5 TLTMVLVNLAGIMERADESLLPGVYKEVGAA-LCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAA 83 (149)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~ 83 (149)
++.+....+..++..........+.+.+.+| .|.++.+.+...+.+..+..++.....++..|+.+.|.+.+......+
T Consensus 235 ~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~il 314 (422)
T COG0738 235 NKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAIL 314 (422)
T ss_pred ChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 3444555566777777777777777777666 788999999999999999999999999999999999999888877777
Q ss_pred HHHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccc
Q 039580 84 ATFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp 147 (149)
.++...+.++.+.+ ....+.|.+.+..+|...++..+..| ++ .+..|..-....+|.++-|
T Consensus 315 l~~~~~l~~g~v~~-~~l~~ig~F~simfPTIfslal~~l~-~~-ts~~s~~l~maivGGAiiP 375 (422)
T COG0738 315 LLLAVALIGGVVAL-YALFLIGLFNSIMFPTIFSLALKNLG-EH-TSVGSGLLVMAIVGGAIIP 375 (422)
T ss_pred HHHHHHHhcChHHH-HHHHHHHHHhHHHHHHHHHHHHhccC-cc-ccccceeeeeheecchHHH
Confidence 77777777885554 35677899999999999999999997 33 3333333344455555544
No 224
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.44 E-value=6.1e-06 Score=63.00 Aligned_cols=142 Identities=13% Similarity=0.080 Sum_probs=101.1
Q ss_pred hHHHHHHHHHHHHHhhhcccccchHHHH-hhcCCCc---chhhHHHHHHHHHHHhhhhhHhHhhhhccchHH-HHHHHHH
Q 039580 6 LTMVLVNLAGIMERADESLLPGVYKEVG-AALCTDP---TGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHI-IALGAFL 80 (149)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~-~~~~~~~ 80 (149)
|.+....+..++....++....+.|... .-++.|+ .+.++....+.++..++..+.|.+..+.+|-|. ++++..+
T Consensus 310 r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~ 389 (599)
T PF06609_consen 310 RGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVL 389 (599)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHH
Confidence 4455555556666655555555555554 3455544 256788888888889999999999988887444 4566555
Q ss_pred HHHHHHHHHH--hhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccc
Q 039580 81 WAAATFLVAI--STTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 81 ~~~~~~~~~~--~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp 147 (149)
+.+..-+++. .+|....+...++.|++.|...........-..|+++.+.+.++..+...+|+.+|.
T Consensus 390 ~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~ 458 (599)
T PF06609_consen 390 MTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGY 458 (599)
T ss_pred HHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHH
Confidence 5543333332 345566677888999999988888888788888999999999999999999888764
No 225
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.42 E-value=4.3e-06 Score=60.16 Aligned_cols=134 Identities=16% Similarity=0.115 Sum_probs=106.6
Q ss_pred HHHHhhhcccccchHHH-HhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhcc--chHHHHHHHHHHHHHHHHHHHhh
Q 039580 16 IMERADESLLPGVYKEV-GAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHN--CAHIIALGAFLWAAATFLVAIST 92 (149)
Q Consensus 16 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g--~~~~~~~~~~~~~~~~~~~~~~~ 92 (149)
+.....+..+....+.+ .+.+|.++.+.|.+.+...+..++.+....+..||.. -+-.......+..-..+..+.++
T Consensus 271 ~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~ 350 (451)
T KOG2615|consen 271 FLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLAR 350 (451)
T ss_pred HHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccc
Confidence 33333333333334444 3668999999999999999999999998888888887 55556566555555556667788
Q ss_pred hhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccccC
Q 039580 93 TFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGLC 149 (149)
Q Consensus 93 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~~ 149 (149)
....+.++..+-.+......++...++.+..|+++||..+|+..+...++.++||.+
T Consensus 351 ~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv 407 (451)
T KOG2615|consen 351 TPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLV 407 (451)
T ss_pred cchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhh
Confidence 888889999999999999999999999999999999999999999999999999974
No 226
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.41 E-value=3e-06 Score=63.01 Aligned_cols=118 Identities=17% Similarity=0.152 Sum_probs=101.5
Q ss_pred HHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHh-HhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhhhHH
Q 039580 30 KEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAA-YLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSRGLNGIGL 108 (149)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 108 (149)
-+....++.+..+.+...+.......+++.+.. .+...+|.|+.+..|+..-.+.....+++++.|..+....+.++.
T Consensus 266 ~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~- 344 (463)
T KOG2816|consen 266 LYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVALA- 344 (463)
T ss_pred EEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhh-
Confidence 334567899999999888888888888888666 788888999999999999999999999999999988887776654
Q ss_pred HHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 109 AIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
....|...+..+.+.+++++|+.+++......+...++|.
T Consensus 345 ~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~ 384 (463)
T KOG2816|consen 345 GIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPA 384 (463)
T ss_pred cchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHH
Confidence 5578899999999999999999999999999988888774
No 227
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.36 E-value=5.2e-06 Score=61.78 Aligned_cols=94 Identities=21% Similarity=0.245 Sum_probs=74.7
Q ss_pred HHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhhh--HHHHHHHhHHHHHhhhcccCc
Q 039580 50 RSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSRGLNGI--GLAIVTLAIQSLVADSTDESN 127 (149)
Q Consensus 50 ~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~--~~~~~~~~~~~~~~~~~~~~~ 127 (149)
..+...+.++..|.++||+|||..+........+......+.. +| +.+ +.++ +.+.......++++|...+++
T Consensus 71 ~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-~~-~~~---~~~l~g~~~~~~s~~~a~vadis~~~~ 145 (463)
T KOG2816|consen 71 AGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-YW-FFL---LLGLSGGFSAIFSVGFAYVADISSEEE 145 (463)
T ss_pred hHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-HH-Hhh---hcccccchhhhhhhhhhheeeccchhH
Confidence 3677789999999999999999999999988888877776655 33 333 3333 245567788899999999999
Q ss_pred hhhHHHHHHHHhhhhhhcccc
Q 039580 128 RGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 128 r~~~~~~~~~~~~~g~~igp~ 148 (149)
|....++.+.....+..++|.
T Consensus 146 R~~~~gll~~~~~~~~~~~p~ 166 (463)
T KOG2816|consen 146 RSSSIGLLSGTFGAGLVIGPA 166 (463)
T ss_pred HHHHHHHHHHHHHHHHhHHHH
Confidence 999999998877777777764
No 228
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.33 E-value=1.6e-05 Score=59.65 Aligned_cols=105 Identities=13% Similarity=0.151 Sum_probs=80.0
Q ss_pred hhhHHHHHHHHHHHhhhhhHhHhhhhccc--h-----HHHHHHHHHHHHHHHHHHHh---------hhhHHHHHHHHhhh
Q 039580 42 GLGSLTLFRSIVQSSCYPLAAYLSVHHNC--A-----HIIALGAFLWAAATFLVAIS---------TTFFQVAVSRGLNG 105 (149)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~--~-----~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~G 105 (149)
..+|..+.+.+...+.+|+.+++=.|.+| | .-+.+|+++.+++...+.++ .+.++++....+++
T Consensus 309 p~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t 388 (493)
T PRK15462 309 PTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMG 388 (493)
T ss_pred CHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHH
Confidence 35778888888888888888877555522 1 12667888888877655331 25677888899999
Q ss_pred hHHHHHHHhHHHHHhhhcccCchhhHHHHHHHH-hhhhhhcc
Q 039580 106 IGLAIVTLAIQSLVADSTDESNRGMAFGWLQLT-GNFGSIIG 146 (149)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~g~~ig 146 (149)
+|+-...|...+.+++..|+|.|++.+|.+... ..+|..++
T Consensus 389 ~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~ 430 (493)
T PRK15462 389 FAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLA 430 (493)
T ss_pred HHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998663 35665554
No 229
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.31 E-value=1.3e-05 Score=58.20 Aligned_cols=117 Identities=17% Similarity=0.143 Sum_probs=84.9
Q ss_pred HHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhcc-----chHHHHH-HHHHHHHHHHHHH-----Hhh------
Q 039580 30 KEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHN-----CAHIIAL-GAFLWAAATFLVA-----IST------ 92 (149)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g-----~~~~~~~-~~~~~~~~~~~~~-----~~~------ 92 (149)
..+..|++.+....+.......+. .+..+..|+.+|+.+ ||.-+++ |......+..... +..
T Consensus 4 RVMIvEL~vpA~lv~~lval~~~~-ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~ 82 (403)
T PF03209_consen 4 RVMIVELGVPAWLVALLVALHYLV-APLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSS 82 (403)
T ss_pred hhHHHHhccHHHHHHHHHHHHHHH-HHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccc
Confidence 346778999988888877776664 467999999999998 7666554 4444444443332 222
Q ss_pred -hhHH----HHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccc
Q 039580 93 -TFFQ----VAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 93 -~~~~----~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp 147 (149)
+.+. ......+.|+|.+...+...++++|..|||+|++..++.....-+|.+++.
T Consensus 83 ~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~a 142 (403)
T PF03209_consen 83 GPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSA 142 (403)
T ss_pred cccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHH
Confidence 2222 234456788999999999999999999999999999998777777766653
No 230
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.27 E-value=6.9e-05 Score=56.13 Aligned_cols=141 Identities=13% Similarity=0.022 Sum_probs=99.0
Q ss_pred hHHHHHHHHHHHHHhhhcccccch-HHHHhh-cCCCcc------h----hhHHHHHHHHHHHhhhhhHhHhhhhccc-hH
Q 039580 6 LTMVLVNLAGIMERADESLLPGVY-KEVGAA-LCTDPT------G----LGSLTLFRSIVQSSCYPLAAYLSVHHNC-AH 72 (149)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~------~----~~~~~~~~~~~~~~~~~~~g~l~dr~g~-~~ 72 (149)
+.+..+++..++......-+..+. .++.++ ++.++. + -.+....+.+...+.+.+..++.+|+|+ |+
T Consensus 258 ~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~ 337 (477)
T TIGR01301 258 RPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKR 337 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Confidence 445667777777777665444443 444433 443221 1 2344455666666777788899999984 77
Q ss_pred HHHHHHHHHHHHHHHHHHhhh---------------------hHHHHHHHHhhhhHHHHHHHhHHHHHhhhccc--Cchh
Q 039580 73 IIALGAFLWAAATFLVAISTT---------------------FFQVAVSRGLNGIGLAIVTLAIQSLVADSTDE--SNRG 129 (149)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~--~~r~ 129 (149)
+...+.++.+++.....+.++ .+..++...+.|+..+..+..-++++++..++ ++.|
T Consensus 338 ~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G 417 (477)
T TIGR01301 338 LWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQG 417 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCc
Confidence 778887777777666554332 26677788889999999999999999999984 5669
Q ss_pred hHHHHHHHHhhhhhhcc
Q 039580 130 MAFGWLQLTGNFGSIIG 146 (149)
Q Consensus 130 ~~~~~~~~~~~~g~~ig 146 (149)
..+|+.|+...+.+.+.
T Consensus 418 ~~mgilN~~I~lpQii~ 434 (477)
T TIGR01301 418 LSMGVLNLAIVIPQIIV 434 (477)
T ss_pred chhhHHHHHHHHHHHHH
Confidence 99999999988887664
No 231
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.24 E-value=1.6e-05 Score=59.40 Aligned_cols=144 Identities=16% Similarity=0.055 Sum_probs=92.7
Q ss_pred chHHHHHHHHHHHHHhhhcccccchHHHH-hhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccch-------HHHH-
Q 039580 5 TLTMVLVNLAGIMERADESLLPGVYKEVG-AALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCA-------HIIA- 75 (149)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~-------~~~~- 75 (149)
...++.+.+..+........+....|.|. +.+|.|..+.|+..++..+...+...++|+++||.-+| +-+.
T Consensus 257 s~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn 336 (466)
T KOG2532|consen 257 SPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFN 336 (466)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHH
Confidence 34567788888888888887777777665 56899999999999999999999999999999998652 1111
Q ss_pred -HHHHHHHHHHHHHHHhhhhHH-HHHHHHhhhhHHHH-HHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccccC
Q 039580 76 -LGAFLWAAATFLVAISTTFFQ-VAVSRGLNGIGLAI-VTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGLC 149 (149)
Q Consensus 76 -~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~G~~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~~ 149 (149)
++....++..+...+.++... ..+.......+..+ ..+..+.-..+. .|++-+..+|+.+....++..++|.+
T Consensus 337 ~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~-apq~a~~l~g~~~~~~~~~~~~~P~~ 412 (466)
T KOG2532|consen 337 TIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQDI-APQHAGFVMGIINFVGALAGFIAPLL 412 (466)
T ss_pred hHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhhhc-cchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333333444444444442111 11111111122111 122222222222 47888999999999999999888863
No 232
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.19 E-value=5.6e-05 Score=56.67 Aligned_cols=103 Identities=16% Similarity=0.105 Sum_probs=74.1
Q ss_pred hhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHH-HHHHHHHHHH-hh-hhHHHHHHHHhhhhHHHHHHHhHHHHH
Q 039580 43 LGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFL-WAAATFLVAI-ST-TFFQVAVSRGLNGIGLAIVTLAIQSLV 119 (149)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~-~~~~~~~~~~-~~-~~~~~~~~~~~~G~~~~~~~~~~~~~~ 119 (149)
.+...++..+..++..|+.|.++|+.++||.++..... ..+....+.+ .+ +++...+..++.-++.+......++++
T Consensus 72 ~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~L 151 (477)
T PF11700_consen 72 WLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYL 151 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45667888899999999999999999977776655444 3444444444 23 344444555556678888899999999
Q ss_pred hhhcccCch--------------------------hhHHHHHHHHhhhhhhc
Q 039580 120 ADSTDESNR--------------------------GMAFGWLQLTGNFGSII 145 (149)
Q Consensus 120 ~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~i 145 (149)
.|..+++++ ++..+.-.....+|..+
T Consensus 152 P~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v 203 (477)
T PF11700_consen 152 PDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLV 203 (477)
T ss_pred HhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHH
Confidence 999999998 88888755555555543
No 233
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.14 E-value=5.9e-09 Score=76.81 Aligned_cols=124 Identities=14% Similarity=0.037 Sum_probs=79.8
Q ss_pred cccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHH----H-hhh----
Q 039580 23 SLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVA----I-STT---- 93 (149)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~----~-~~~---- 93 (149)
.......+.+.++.+.+.. -.......+...++.+....+.||+|||+.+..+....+++..... . .++
T Consensus 270 ~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (451)
T PF00083_consen 270 NFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWW 347 (451)
T ss_pred ccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3444556667677776665 2222333455566777778999999999999988888777665543 1 122
Q ss_pred hHHHHHHHHhhhhHHH-HHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 94 FFQVAVSRGLNGIGLA-IVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 94 ~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
....++...+.....+ +..+....+..|.+|.+.|+++.++......++..++|.
T Consensus 348 ~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~ 403 (451)
T PF00083_consen 348 SILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPF 403 (451)
T ss_pred ccccceeeeecccccccccccccccccccccccccccccccccccccccccccccc
Confidence 1111222222222222 344566678899999999999999988888888777664
No 234
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.14 E-value=0.00013 Score=53.38 Aligned_cols=139 Identities=12% Similarity=0.091 Sum_probs=103.5
Q ss_pred hHHHHHHHHHHHHHhhhcccccchHHHHhh-cCCCcchhhH-HHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHH
Q 039580 6 LTMVLVNLAGIMERADESLLPGVYKEVGAA-LCTDPTGLGS-LTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAA 83 (149)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~ 83 (149)
+....+++..++.. ....-+...|++.++ .|++.+|+.- +.-...-.+.....+...+.|..+.|++++.+.+...+
T Consensus 5 ~~~~llc~~gf~~~-frPsEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~ 83 (412)
T PF01770_consen 5 KITLLLCLFGFFKE-FRPSEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYII 83 (412)
T ss_pred HHHHHHHHHHHHHh-cCCCCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 44444444333332 234556667777765 7888887653 44444556667778899999999999999999999888
Q ss_pred HHHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcc
Q 039580 84 ATFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIG 146 (149)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig 146 (149)
...+..+.++.....+..+..|+..+. ..+..+++-...|+++-.++.+......-+|..++
T Consensus 84 t~~lll~~~sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s 145 (412)
T PF01770_consen 84 TWLLLLFGTSVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFIS 145 (412)
T ss_pred HHHHHHHHCcHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888999999999999999998774 66788888888899998888877666555555444
No 235
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.12 E-value=3.5e-05 Score=57.87 Aligned_cols=141 Identities=10% Similarity=-0.056 Sum_probs=94.8
Q ss_pred HHHHHHHHHHHHHhhhcccccchHHHHhh-cCCCcchhhHHHHHHHHHHHhhhhhHhHhhhh----ccchHHHHHHHHHH
Q 039580 7 TMVLVNLAGIMERADESLLPGVYKEVGAA-LCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVH----HNCAHIIALGAFLW 81 (149)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~g~~~~~~~~~~~~ 81 (149)
..+...+..++.....+....+.|.+.++ .|.|..+.....+.+.++.+++.+++|.++|| ..+|........+.
T Consensus 274 ~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~ 353 (495)
T KOG2533|consen 274 GVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLY 353 (495)
T ss_pred hHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 35667778888888888888889998877 56899999999999999999999999999999 55665555555554
Q ss_pred HHHH-HHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchh-hHHHHHHHHhhhhhhccc
Q 039580 82 AAAT-FLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRG-MAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 82 ~~~~-~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~g~~igp 147 (149)
.... ......++.............+.....+......++..+++.|. +..+....+.+.+..++|
T Consensus 354 ~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~ 421 (495)
T KOG2533|consen 354 AIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISG 421 (495)
T ss_pred HHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhh
Confidence 4433 33333333444333334444455666677777777776554443 444445555555555544
No 236
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.09 E-value=3e-05 Score=56.52 Aligned_cols=94 Identities=14% Similarity=0.068 Sum_probs=70.4
Q ss_pred hhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHH-HHHHHHHHHHHHhhh---hHHHHHHHHhhhhHHHHHHHhHHH
Q 039580 42 GLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGA-FLWAAATFLVAISTT---FFQVAVSRGLNGIGLAIVTLAIQS 117 (149)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~G~~~~~~~~~~~~ 117 (149)
-.+...++..+..++.+|..|.++|+.|+||-....+ .+..+......+.++ ++...+...+..++........++
T Consensus 59 ~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds 138 (438)
T COG2270 59 YWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYDS 138 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehhh
Confidence 3566668888888999999999999999766655444 444444444444443 444556677788899999999999
Q ss_pred HHhhhcccCchhhHHHHH
Q 039580 118 LVADSTDESNRGMAFGWL 135 (149)
Q Consensus 118 ~~~~~~~~~~r~~~~~~~ 135 (149)
++.+..++++.++..+.-
T Consensus 139 ~L~~~~~k~~~~riS~lg 156 (438)
T COG2270 139 MLPRLTTKDNMGRISGLG 156 (438)
T ss_pred HhhhhcCccccCcccccc
Confidence 999999999888887763
No 237
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.03 E-value=5.4e-05 Score=56.23 Aligned_cols=135 Identities=16% Similarity=0.231 Sum_probs=101.7
Q ss_pred HHHHHHHHHhhhcccccch-HHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhh----ccc-hHHHHHHHHHHHHH
Q 039580 11 VNLAGIMERADESLLPGVY-KEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVH----HNC-AHIIALGAFLWAAA 84 (149)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~g~-~~~~~~~~~~~~~~ 84 (149)
-.+.-+...........++ -++.+..|+++..+|.+..+.-+.-++.-|+.|.+.|| +|| |+.++++.+-.++.
T Consensus 17 Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~ 96 (467)
T COG2211 17 YGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIV 96 (467)
T ss_pred hcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHH
Confidence 3344444544444444444 45567789999999999999999999999999999997 455 56677777777777
Q ss_pred HHHHHHhhh------hHHHHHHHHhhhhHHHHHHHhHHHHHhhhc-ccCchhhHHHHHHHHhhhhhhc
Q 039580 85 TFLVAISTT------FFQVAVSRGLNGIGLAIVTLAIQSLVADST-DESNRGMAFGWLQLTGNFGSII 145 (149)
Q Consensus 85 ~~~~~~~~~------~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~i 145 (149)
..+...+++ .....+...+.+++.........++..|.. +++||.+..++-+...++|..+
T Consensus 97 ~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l 164 (467)
T COG2211 97 AVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLL 164 (467)
T ss_pred HHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 766655542 344556678888988888888888888886 5899999999988888887654
No 238
>PTZ00207 hypothetical protein; Provisional
Probab=98.02 E-value=0.00022 Score=54.78 Aligned_cols=140 Identities=9% Similarity=0.043 Sum_probs=97.4
Q ss_pred chHHHHHHHHHHHHHhhhcccccchHHHHhhc-CCCcch-hhH-HHHHHHHHHHhhhhhHhHhhhhcc--------chHH
Q 039580 5 TLTMVLVNLAGIMERADESLLPGVYKEVGAAL-CTDPTG-LGS-LTLFRSIVQSSCYPLAAYLSVHHN--------CAHI 73 (149)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~-~~~~~~~~~~~~~~~~g~l~dr~g--------~~~~ 73 (149)
...+|++....++......+...-..++.+.+ |.+.++ ... ..+.+++.+.++....|.+....- +|+.
T Consensus 352 ~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~ 431 (591)
T PTZ00207 352 TARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITI 431 (591)
T ss_pred chhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhH
Confidence 34567777777777776666666678888888 663332 222 677788888888888887762111 2233
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhc
Q 039580 74 IALGAFLWAAATFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSII 145 (149)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i 145 (149)
.+.....+.++.+++.+......+++.-++.|++.|..++......+|+|. |+-|+-..+......+|+.+
T Consensus 432 ~l~~~~~~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~ 502 (591)
T PTZ00207 432 ALFIPSVCIITMLTLFLTLPKAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIF 502 (591)
T ss_pred HHHHHHHHHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHH
Confidence 333333355555555554333688999999999999999999999999998 88898888877777776654
No 239
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=97.98 E-value=4.5e-05 Score=56.16 Aligned_cols=139 Identities=14% Similarity=0.052 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhh----ccchHHHHHHH-HHHHH
Q 039580 9 VLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVH----HNCAHIIALGA-FLWAA 83 (149)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~g~~~~~~~~~-~~~~~ 83 (149)
+.+....+..-+.+..-..+.+.+.+++|.+....+.+..+.-+...+.+|+.|..+|| |||||-++... ....+
T Consensus 35 i~v~~ia~Gvqf~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~ 114 (498)
T KOG0637|consen 35 ISVASIAAGVQFGWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAV 114 (498)
T ss_pred HHHHHHHHHHHHHHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHH
Confidence 33333333333444455566777888999999999999988888899999999999997 68877766544 44444
Q ss_pred HHHHHHHhhhh-----------------HHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhh-HHHHHHHHhhhhhhc
Q 039580 84 ATFLVAISTTF-----------------FQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGM-AFGWLQLTGNFGSII 145 (149)
Q Consensus 84 ~~~~~~~~~~~-----------------~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~-~~~~~~~~~~~g~~i 145 (149)
+.++..++.+. ..++++.-+.=+.....+...-+++.|...+++|.+ +++.+.....+|..+
T Consensus 115 ~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvL 194 (498)
T KOG0637|consen 115 SLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVL 194 (498)
T ss_pred HHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhccee
Confidence 55544443221 122233333333455677788899999998777777 999999999999888
Q ss_pred cc
Q 039580 146 GG 147 (149)
Q Consensus 146 gp 147 (149)
|-
T Consensus 195 GY 196 (498)
T KOG0637|consen 195 GY 196 (498)
T ss_pred ee
Confidence 74
No 240
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.97 E-value=5.9e-06 Score=63.97 Aligned_cols=140 Identities=19% Similarity=0.215 Sum_probs=118.7
Q ss_pred HHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHH
Q 039580 8 MVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFL 87 (149)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~ 87 (149)
+.++.+..+........++..+..+.+.++++.++.|++.+.+-++..+...+..+...|..|-|++-+|.++++++.++
T Consensus 99 l~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll 178 (735)
T KOG3626|consen 99 LVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLL 178 (735)
T ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHH
Confidence 44555666666666666777788888999999999999999999999999999999999999999999999999998887
Q ss_pred HHHh--------------------h---------------------------h----hH-HHHHHHHhhhhHHHHHHHhH
Q 039580 88 VAIS--------------------T---------------------------T----FF-QVAVSRGLNGIGLAIVTLAI 115 (149)
Q Consensus 88 ~~~~--------------------~---------------------------~----~~-~~~~~~~~~G~~~~~~~~~~ 115 (149)
.++. + + ++ .+..++++.|+|....++..
T Consensus 179 ~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlG 258 (735)
T KOG3626|consen 179 FALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLG 258 (735)
T ss_pred HhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCC
Confidence 6540 0 0 22 46678999999999999999
Q ss_pred HHHHhhhcccCchhhHHHHHHHHhhhhhhccc
Q 039580 116 QSLVADSTDESNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 116 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp 147 (149)
.+++.|...+++-+.+.|+......+|.++|-
T Consensus 259 isYiDDnvk~~~SplYlgi~~~~~~lGPaiGf 290 (735)
T KOG3626|consen 259 ISYIDDNVKKKNSPLYLGILYSMAILGPAIGF 290 (735)
T ss_pred CccccccccccCCcHHHHHHHHHHHhhhHHHH
Confidence 99999999999999999999988888887763
No 241
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.93 E-value=0.00023 Score=52.86 Aligned_cols=119 Identities=23% Similarity=0.282 Sum_probs=85.3
Q ss_pred cchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhcc-----chHHHHHHHHHHHHHHHHHHHh----hhhHHH
Q 039580 27 GVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHN-----CAHIIALGAFLWAAATFLVAIS----TTFFQV 97 (149)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g-----~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 97 (149)
...|.+.+++|.++.+.....+...+... ..|+.|.++|-+. ||+.+.++..+..++....... .+....
T Consensus 11 ~~~~~l~~~l~ls~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~ 89 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIA 89 (433)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhH
Confidence 34677889999999998887777666544 4689999999983 5666666666665544444432 245555
Q ss_pred HHHHHhhhhHHHHHHHhHHHHHhhhc--ccCchhhHHHHHHHHhhhhhhcc
Q 039580 98 AVSRGLNGIGLAIVTLAIQSLVADST--DESNRGMAFGWLQLTGNFGSIIG 146 (149)
Q Consensus 98 ~~~~~~~G~~~~~~~~~~~~~~~~~~--~~~~r~~~~~~~~~~~~~g~~ig 146 (149)
.+..++..++.........+...|.. .|++|+...+.......+|..++
T Consensus 90 ~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~ 140 (433)
T PF03092_consen 90 VVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVG 140 (433)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHH
Confidence 66677788888888899999988887 34447777877777777776655
No 242
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.87 E-value=0.00057 Score=51.69 Aligned_cols=99 Identities=17% Similarity=0.094 Sum_probs=78.1
Q ss_pred HHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHH---HHHHHHhhhhHHHHHHHhHHHHHhhhcccC
Q 039580 50 RSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQ---VAVSRGLNGIGLAIVTLAIQSLVADSTDES 126 (149)
Q Consensus 50 ~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~ 126 (149)
............+...|+.|||.....+.....++.+...+..+... ..+...+...+.+..+.....+..|++|+.
T Consensus 359 ~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~ 438 (521)
T KOG0255|consen 359 SGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTV 438 (521)
T ss_pred HHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHH
Confidence 33355666667789999999999999999999998888776654332 444555555566666677788999999999
Q ss_pred chhhHHHHHHHHhhhhhhcccc
Q 039580 127 NRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 127 ~r~~~~~~~~~~~~~g~~igp~ 148 (149)
.|..+.+..+....+|.+++|.
T Consensus 439 ~r~~~~~~~~~~~~~~~i~ap~ 460 (521)
T KOG0255|consen 439 VRNTAVGAISAAARLGSILAPL 460 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998875
No 243
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.83 E-value=0.001 Score=49.67 Aligned_cols=106 Identities=16% Similarity=0.164 Sum_probs=83.0
Q ss_pred hhhHHHHHHHHHHHhhhhhHhHhhhhccch-------HHHHHHHHHHHHHHHHHHHh----------hhhHHHHHHHHhh
Q 039580 42 GLGSLTLFRSIVQSSCYPLAAYLSVHHNCA-------HIIALGAFLWAAATFLVAIS----------TTFFQVAVSRGLN 104 (149)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~-------~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~ 104 (149)
..++..+.+.+...+..|+..++-.|.+++ .-+.++..+.+.+.+..... .+.++++...+++
T Consensus 325 p~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~ 404 (498)
T COG3104 325 PPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQ 404 (498)
T ss_pred CHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHH
Confidence 457788888888889998888887774433 22456666666666544332 2567888889999
Q ss_pred hhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccc
Q 039580 105 GIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 105 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp 147 (149)
++|+=+..|...+.+.+..|++-.+..++.+......|+.++.
T Consensus 405 s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g 447 (498)
T COG3104 405 SFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGG 447 (498)
T ss_pred HHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999888888877664
No 244
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.80 E-value=0.0024 Score=47.37 Aligned_cols=118 Identities=14% Similarity=0.094 Sum_probs=85.7
Q ss_pred cccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHH---Hhh-------hh
Q 039580 25 LPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVA---IST-------TF 94 (149)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~---~~~-------~~ 94 (149)
.......|.+.-|+++..+|..-+...+....+.....++.+|+|..|.-.++...-..+..... +.+ +.
T Consensus 277 f~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~ 356 (432)
T PF06963_consen 277 FGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISA 356 (432)
T ss_pred CcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHH
Confidence 44555666666799999999999999999999999999999999998887777665433322211 111 22
Q ss_pred HHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhh
Q 039580 95 FQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFG 142 (149)
Q Consensus 95 ~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 142 (149)
..+..+-.+.-+|.=..-.+..-++.|..|+++|++..|..+...++-
T Consensus 357 ~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf 404 (432)
T PF06963_consen 357 YLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLF 404 (432)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHH
Confidence 334444444445555566778888999999999999999877666553
No 245
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.72 E-value=0.0017 Score=48.78 Aligned_cols=139 Identities=10% Similarity=0.008 Sum_probs=89.8
Q ss_pred hHHHHHHHHHHHHHhhhcccccchHHHHhhcCC-----CcchhhHHHHHHHHHHHhh-hhhHhHhhhhccchHHHHHHHH
Q 039580 6 LTMVLVNLAGIMERADESLLPGVYKEVGAALCT-----DPTGLGSLTLFRSIVQSSC-YPLAAYLSVHHNCAHIIALGAF 79 (149)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~~~g~l~dr~g~~~~~~~~~~ 79 (149)
+.+....+..++....++. ..+..+.+.. +.++..++-+...+..++. .++.+++++|++|++.+.....
T Consensus 7 ~k~~~~~l~fF~il~~Y~i----LR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~ 82 (472)
T TIGR00769 7 KKFLPLFLMFFCILFNYTI----LRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVIS 82 (472)
T ss_pred HHHHHHHHHHHHHHHHHHH----HHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHH
Confidence 3444444555555555443 3344444433 3467788877777766666 8999999999999999887666
Q ss_pred HHHHHHHHHHHh--h-----------------------------hhHHHHHHHHhhhhHHHHHHH-hHHHHHhhhcccCc
Q 039580 80 LWAAATFLVAIS--T-----------------------------TFFQVAVSRGLNGIGLAIVTL-AIQSLVADSTDESN 127 (149)
Q Consensus 80 ~~~~~~~~~~~~--~-----------------------------~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~~~~~ 127 (149)
.+.....++.+. + +.|...+..+...+-...... .-.++++|.+++++
T Consensus 83 ~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~q 162 (472)
T TIGR00769 83 PFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDE 162 (472)
T ss_pred HHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 655554443321 0 012222222233333333443 66778999999999
Q ss_pred hhhHHHHHHHHhhhhhhcccc
Q 039580 128 RGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 128 r~~~~~~~~~~~~~g~~igp~ 148 (149)
-.|..++...+.++|..++|.
T Consensus 163 akRfy~l~~~ganlg~i~sg~ 183 (472)
T TIGR00769 163 AKRFYALFGLGANVALIFSGR 183 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998873
No 246
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=97.71 E-value=6.9e-05 Score=53.10 Aligned_cols=60 Identities=13% Similarity=0.094 Sum_probs=56.4
Q ss_pred HhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccccC
Q 039580 90 ISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGLC 149 (149)
Q Consensus 90 ~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~~ 149 (149)
..+++..+++..++.|.|.+..++..|.++.+..|+|++.+.+++.+..+++|..+||++
T Consensus 6 ~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i 65 (310)
T TIGR01272 6 SQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLF 65 (310)
T ss_pred HhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHH
Confidence 457899999999999999999999999999999999999999999999999999999864
No 247
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.62 E-value=3e-05 Score=57.20 Aligned_cols=142 Identities=14% Similarity=0.023 Sum_probs=94.0
Q ss_pred hHHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhH--------HHH-HHHHHHHhhhhhHhHhhhhccchHHHHH
Q 039580 6 LTMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGS--------LTL-FRSIVQSSCYPLAAYLSVHHNCAHIIAL 76 (149)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~-~~~~~~~~~~~~~g~l~dr~g~~~~~~~ 76 (149)
+.+...+...+......+..+.....+.++.+..+..... ... +..++..++.++...+.|+.|||++.+.
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~ 383 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLM 383 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHh
Confidence 3445556667777777777788888888877764433222 112 2233444577788889999999999999
Q ss_pred HHHHHHHHHHHHHHhhhh----HHHHHHHHhhhh-HHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccc
Q 039580 77 GAFLWAAATFLVAISTTF----FQVAVSRGLNGI-GLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~G~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp 147 (149)
++.++.+..+..+...|. ..+.+...+..+ +.-+.......+-+|.+|.+.|++..|+.....-.|.++|.
T Consensus 384 GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~ 459 (538)
T KOG0252|consen 384 GFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGA 459 (538)
T ss_pred hHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHH
Confidence 999999888777766552 112222222222 22223334444569999999999999998888888877764
No 248
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.47 E-value=0.00011 Score=55.33 Aligned_cols=76 Identities=24% Similarity=0.199 Sum_probs=57.6
Q ss_pred HHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHH-HHHHHHHHHHHH
Q 039580 15 GIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGA-FLWAAATFLVAI 90 (149)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~-~~~~~~~~~~~~ 90 (149)
++..........++.+.+.+.+|+++.+.|.+...--+..++..|++|.++||+.+||-++++. +.+....++..+
T Consensus 20 ~~~~~~~~g~l~pll~vy~kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a~fll~f 96 (618)
T KOG3762|consen 20 YLFFGARFGSLFPLLAVYFKQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVTATFLLVF 96 (618)
T ss_pred eeeeeecccccchHHHHHHHHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHHHHheee
Confidence 3334444555666777888999999999999999999999999999999999998766655554 444444554444
No 249
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.38 E-value=0.0017 Score=48.48 Aligned_cols=100 Identities=15% Similarity=0.139 Sum_probs=80.4
Q ss_pred HHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccC
Q 039580 47 TLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDES 126 (149)
Q Consensus 47 ~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~ 126 (149)
..+.-....+...+.+.+.|+.++|..+.++......-.... +..|-+.++....+.|+|.+..+...-.+++|..++|
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gf-l~~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGF-LFPNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHH-HhcchHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 444555677888999999999999999999888877755544 3456777889999999999999999999999999999
Q ss_pred chhhHHHHHHHHhhhhhhccc
Q 039580 127 NRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 127 ~r~~~~~~~~~~~~~g~~igp 147 (149)
++.+..++.=.....+..+|+
T Consensus 135 tie~Nisi~Wai~~~~li~Gg 155 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGG 155 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhh
Confidence 999999985555555555543
No 250
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.31 E-value=0.00012 Score=51.02 Aligned_cols=99 Identities=13% Similarity=0.060 Sum_probs=75.8
Q ss_pred ccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHh
Q 039580 24 LLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSRGL 103 (149)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (149)
...+..-++.++++..+.+++.......-..++...+.|-++||-|||+....-++-..++++ .-.++++-.+.++|.+
T Consensus 55 LQgPYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi-TKhSpqYkVLmVGR~L 133 (454)
T KOG4332|consen 55 LQGPYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI-TKHSPQYKVLMVGRVL 133 (454)
T ss_pred hcCceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-hhcCCceEEEeehhhh
Confidence 344444445577888888888887777777778888999999999999987766666655544 3457788889999999
Q ss_pred hhhHHHHHHHhHHHHH-hhhc
Q 039580 104 NGIGLAIVTLAIQSLV-ADST 123 (149)
Q Consensus 104 ~G~~~~~~~~~~~~~~-~~~~ 123 (149)
-|+..+..+.+..++. .|.-
T Consensus 134 GGiaTsLLFSaFEsWliaEHn 154 (454)
T KOG4332|consen 134 GGIATSLLFSAFESWLIAEHN 154 (454)
T ss_pred hhHHHHHHHHHHHHHHHHHhh
Confidence 9999999888888764 5554
No 251
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.27 E-value=0.0015 Score=50.91 Aligned_cols=81 Identities=10% Similarity=0.060 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHhhhcccccchHHH-HhhcCCCcchhhHHHHHHHH-HHHhhhhhHhHhhhhcc--chHHHHHHHHHHH
Q 039580 7 TMVLVNLAGIMERADESLLPGVYKEV-GAALCTDPTGLGSLTLFRSI-VQSSCYPLAAYLSVHHN--CAHIIALGAFLWA 82 (149)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~g--~~~~~~~~~~~~~ 82 (149)
.++...+..++..........+.|.+ .+.+|.++.+.+++.....+ +.+++.++.|++.||++ .|+.+.++.....
T Consensus 331 ~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~ 410 (633)
T TIGR00805 331 IYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLST 410 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHH
Confidence 34444455555555555555566655 55699999999999887766 56889999999999998 4677777776666
Q ss_pred HHHHH
Q 039580 83 AATFL 87 (149)
Q Consensus 83 ~~~~~ 87 (149)
++.+.
T Consensus 411 ~~~~~ 415 (633)
T TIGR00805 411 LSYLL 415 (633)
T ss_pred HHHHH
Confidence 65433
No 252
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.10 E-value=0.0082 Score=44.14 Aligned_cols=106 Identities=10% Similarity=0.112 Sum_probs=76.0
Q ss_pred CcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHH-----HHHHhhhhHHHHHHHHhhhhHHHHHHH
Q 039580 39 DPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATF-----LVAISTTFFQVAVSRGLNGIGLAIVTL 113 (149)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~G~~~~~~~~ 113 (149)
..++..+....|.++..++.--... +.-|++.+...+-..-..+ ..-+.++.|...+..+..|+..|..+.
T Consensus 279 ~r~~Y~~Y~~~YQ~GVFISRSS~~~----~rir~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YV 354 (402)
T PF02487_consen 279 PRDQYRWYQLLYQLGVFISRSSLPF----FRIRRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYV 354 (402)
T ss_pred HHHHHHHHHHHHHHHHhhhhcceee----eehhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHH
Confidence 4667888888888887776442221 2224444443333222111 223457888888889999999999999
Q ss_pred hHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 114 AIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 114 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
.....+.|..|+++|...+|....+.+.|..++++
T Consensus 355 NtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgl 389 (402)
T PF02487_consen 355 NTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGL 389 (402)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 99999999999999999999999999998887654
No 253
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.86 E-value=0.058 Score=40.51 Aligned_cols=101 Identities=14% Similarity=0.123 Sum_probs=72.0
Q ss_pred hHHHHHHHHHHHhhhhhHhHhh---hhccchHHHHHHHHHHHHHHHHHHHh------------------hhhHHHHHHHH
Q 039580 44 GSLTLFRSIVQSSCYPLAAYLS---VHHNCAHIIALGAFLWAAATFLVAIS------------------TTFFQVAVSRG 102 (149)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~g~l~---dr~g~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~ 102 (149)
+.......++..++....+.+. +|+|+++.+..+..+..+..++.... ++.....+.-+
T Consensus 282 ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~ 361 (461)
T KOG3098|consen 282 AIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGF 361 (461)
T ss_pred HHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHH
Confidence 3334445566666666666554 56789999988888877766654321 23445667778
Q ss_pred hhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhc
Q 039580 103 LNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSII 145 (149)
Q Consensus 103 ~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i 145 (149)
+.|++.+......+..+.+.+ +++|..+.+++..-..++..+
T Consensus 362 l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v 403 (461)
T KOG3098|consen 362 LLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCV 403 (461)
T ss_pred HHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999 788888888876666665544
No 254
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=96.70 E-value=0.032 Score=43.11 Aligned_cols=140 Identities=17% Similarity=0.155 Sum_probs=95.9
Q ss_pred hHHHHHHHHHHHHHhhhc-ccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhc-cchHHHHHHHHHHHH
Q 039580 6 LTMVLVNLAGIMERADES-LLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHH-NCAHIIALGAFLWAA 83 (149)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~ 83 (149)
+....+...-..+..... .......++.+++|.+...+.-....+.-.........++++|-| ||-+++.++..+..+
T Consensus 37 ~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~ 116 (571)
T KOG1237|consen 37 LSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLL 116 (571)
T ss_pred HhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 333333333444444443 335567777889998887777777777777778888999999987 788888888877777
Q ss_pred HHHHHHHhh----------------------h---hHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccC------chhhHH
Q 039580 84 ATFLVAIST----------------------T---FFQVAVSRGLNGIGLAIVTLAIQSLVADSTDES------NRGMAF 132 (149)
Q Consensus 84 ~~~~~~~~~----------------------~---~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~------~r~~~~ 132 (149)
+..+..... + ...+....-+..+|.|+.-++..++-+|.++++ ++.+.+
T Consensus 117 G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fF 196 (571)
T KOG1237|consen 117 GLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFF 196 (571)
T ss_pred HHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccch
Confidence 654432210 0 124566677777888999999999999999822 223666
Q ss_pred HHHHHHhhhhhhc
Q 039580 133 GWLQLTGNFGSII 145 (149)
Q Consensus 133 ~~~~~~~~~g~~i 145 (149)
.++....+.|..+
T Consensus 197 nW~yf~~~~g~l~ 209 (571)
T KOG1237|consen 197 NWFYFSQNGGALL 209 (571)
T ss_pred hHHHHHHHHHHHH
Confidence 7777777776654
No 255
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=96.55 E-value=0.025 Score=42.28 Aligned_cols=108 Identities=7% Similarity=-0.035 Sum_probs=62.3
Q ss_pred HhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhcc----chHHHHHHHHH------HHHHHHHHH--HhhhhHHHHHH
Q 039580 33 GAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHN----CAHIIALGAFL------WAAATFLVA--ISTTFFQVAVS 100 (149)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g----~~~~~~~~~~~------~~~~~~~~~--~~~~~~~~~~~ 100 (149)
.+-.|.+..+..+...+...+..++..+.|.++||+. +.......-.. .++..+... +..+...+...
T Consensus 275 ~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~i 354 (493)
T KOG1330|consen 275 YELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLI 354 (493)
T ss_pred HHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHH
Confidence 3334557777777778889999999999999999943 21112221111 111111111 12222233333
Q ss_pred HHhhhhHHHHH-HHhHHHHHhhhcccCchhhHHHHHHHHhh
Q 039580 101 RGLNGIGLAIV-TLAIQSLVADSTDESNRGMAFGWLQLTGN 140 (149)
Q Consensus 101 ~~~~G~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 140 (149)
.++.|...... +....-...+..||++|.++.++......
T Consensus 355 l~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h 395 (493)
T KOG1330|consen 355 LFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEH 395 (493)
T ss_pred HHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHH
Confidence 44455433333 44555677899999999999998654443
No 256
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.52 E-value=0.013 Score=42.54 Aligned_cols=76 Identities=24% Similarity=0.372 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHHHHHHHHh--h-h------hHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccC---chhhHHHHHHHHh
Q 039580 72 HIIALGAFLWAAATFLVAIS--T-T------FFQVAVSRGLNGIGLAIVTLAIQSLVADSTDES---NRGMAFGWLQLTG 139 (149)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~--~-~------~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~---~r~~~~~~~~~~~ 139 (149)
|++.++.++..++.++..++ + . ...++++..+.++|.|+.-|+..++..|.++++ +|.+...++....
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 56778888888888774432 1 2 256888999999999999999999999999876 4566777788888
Q ss_pred hhhhhccc
Q 039580 140 NFGSIIGG 147 (149)
Q Consensus 140 ~~g~~igp 147 (149)
++|..+++
T Consensus 82 n~G~~~~~ 89 (372)
T PF00854_consen 82 NIGSLFSP 89 (372)
T ss_dssp HHHHHHHH
T ss_pred hhhhHhhc
Confidence 99988765
No 257
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.28 E-value=0.0027 Score=47.02 Aligned_cols=103 Identities=10% Similarity=-0.080 Sum_probs=67.6
Q ss_pred HHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccc-hHHHHHHHHHHHHHHHH-HHH---hhhhHHHHHHHHhhhh
Q 039580 32 VGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNC-AHIIALGAFLWAAATFL-VAI---STTFFQVAVSRGLNGI 106 (149)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~-~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~G~ 106 (149)
..+.-|.+....|.+.....++.++++...|.+.||..+ |.+.........++... ... ..+.+.+.....+.|.
T Consensus 292 ~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~ 371 (480)
T KOG2563|consen 292 ALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGF 371 (480)
T ss_pred ccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHH
Confidence 334456666788999999999999999999999999976 44444444444444222 212 1234455666777888
Q ss_pred HHHHHHHhHHHHHhhhcccCchhhHHHH
Q 039580 107 GLAIVTLAIQSLVADSTDESNRGMAFGW 134 (149)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 134 (149)
+.....|...-+..|..-|..-++-.|+
T Consensus 372 ~~~~~~Pig~ElgvE~TyPv~E~tSsGl 399 (480)
T KOG2563|consen 372 FGTGYLPIGFELGVETTYPVAEGTSSGL 399 (480)
T ss_pred hhcCCCCcceeeeeeeccccCCccccee
Confidence 8777888777777776434333444443
No 258
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=96.08 E-value=0.092 Score=38.75 Aligned_cols=137 Identities=11% Similarity=0.035 Sum_probs=84.1
Q ss_pred chHHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHh--hhhhHhHhhh-----hccchHHHHHH
Q 039580 5 TLTMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSS--CYPLAAYLSV-----HHNCAHIIALG 77 (149)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~l~d-----r~g~~~~~~~~ 77 (149)
++.+..+.+.+..+..-..... .+|.+.+.-|.|-++.+... +++-. .-.++..+.| |+||||..++=
T Consensus 30 ~~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS----~ay~P~sLKllWaPiVDs~y~k~~GrrksWvvp 104 (510)
T KOG3574|consen 30 RSSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFS----FAYWPFSLKLLWAPIVDSVYSKRFGRRKSWVVP 104 (510)
T ss_pred hhhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhhhhhh----hhhhHHHHHHHHHhhhHHHHHHhhccccceeee
Confidence 4455566667777777776666 78888887777766554433 22222 2347777888 99999886542
Q ss_pred HHHHHHHHHHHHH-------------hhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhh
Q 039580 78 AFLWAAATFLVAI-------------STTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSI 144 (149)
Q Consensus 78 ~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 144 (149)
+- ..++.++..+ .++........++.-+..+..-.++..+.-.+.++++.|-+......+.+.|..
T Consensus 105 ~q-~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~Gyf 183 (510)
T KOG3574|consen 105 CQ-YLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYF 183 (510)
T ss_pred hH-HHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHH
Confidence 21 1122222211 122233333334444555556667788888888899999888887778888877
Q ss_pred ccc
Q 039580 145 IGG 147 (149)
Q Consensus 145 igp 147 (149)
+|.
T Consensus 184 L~~ 186 (510)
T KOG3574|consen 184 LGN 186 (510)
T ss_pred hhc
Confidence 664
No 259
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.03 E-value=0.031 Score=41.70 Aligned_cols=110 Identities=15% Similarity=0.131 Sum_probs=80.4
Q ss_pred CCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHH----------hhhhHHHHHHHHhhhhH
Q 039580 38 TDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAI----------STTFFQVAVSRGLNGIG 107 (149)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~G~~ 107 (149)
.|+...+.......++..++..+..+.-.+..-|+++.+..+..++..+.... .++.+..+.--++..+.
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~ 331 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVI 331 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHH
Confidence 78888888888888888899888888888888888888777766655443211 11222233334555555
Q ss_pred HHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccc
Q 039580 108 LAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp 147 (149)
....+-....+++|..|+..-++..++.....++|..++.
T Consensus 332 ~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~ 371 (433)
T PF03092_consen 332 GMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSS 371 (433)
T ss_pred HHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 5666666778899999999999999999998888876653
No 260
>PRK03612 spermidine synthase; Provisional
Probab=95.99 E-value=0.38 Score=36.92 Aligned_cols=111 Identities=13% Similarity=0.141 Sum_probs=57.9
Q ss_pred hhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHH--HH-HHHHHHHHhhh----h-HHHHHHHHhhh
Q 039580 34 AALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFL--WA-AATFLVAISTT----F-FQVAVSRGLNG 105 (149)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~--~~-~~~~~~~~~~~----~-~~~~~~~~~~G 105 (149)
.-+|.+....+.+.+.+..+..+++.+.+++.++.-++.. ..-..+ .+ ++..+...... . .......++.+
T Consensus 43 ~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~ 121 (521)
T PRK03612 43 YLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIG 121 (521)
T ss_pred HHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3467778888999999999999999998888744322222 111111 11 11111111111 1 12233445567
Q ss_pred hHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcc
Q 039580 106 IGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIG 146 (149)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ig 146 (149)
+..|...|....+..+... ++-++..|-......+|+.+|
T Consensus 122 ~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G 161 (521)
T PRK03612 122 LLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVG 161 (521)
T ss_pred HHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHH
Confidence 7777777776666655432 122333344444444444444
No 261
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=95.63 E-value=0.11 Score=38.32 Aligned_cols=99 Identities=15% Similarity=0.101 Sum_probs=72.4
Q ss_pred hHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhc
Q 039580 44 GSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADST 123 (149)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~ 123 (149)
+.+..+..+...+....+.+..+|...+.=......++.++.++.+++++.+.-+++-.+.+++.|........+.. .+
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y 140 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-FY 140 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-hc
Confidence 44666677778888888999999987544445666677888888888899998888999999988888887777644 55
Q ss_pred ccCchhhHHHHHHHHhhhhhhccc
Q 039580 124 DESNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 124 ~~~~r~~~~~~~~~~~~~g~~igp 147 (149)
++ ...+.+..+.+.++.+|+
T Consensus 141 ~~----~~l~~wssGTG~aGl~Ga 160 (402)
T PF02487_consen 141 GK----SSLSAWSSGTGGAGLVGA 160 (402)
T ss_pred Cc----cccccccCCcChhhHHHH
Confidence 43 235556666666666654
No 262
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=94.81 E-value=1.3 Score=33.37 Aligned_cols=74 Identities=8% Similarity=-0.009 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHhhhcccccchHHHHhhcCC-CcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHH
Q 039580 7 TMVLVNLAGIMERADESLLPGVYKEVGAALCT-DPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFL 80 (149)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~ 80 (149)
....+....+.......++....|.+..+... +--..+.....-.+..++..+..|.+.||..|.+........
T Consensus 3 ~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~ 77 (432)
T PF06963_consen 3 ALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVV 77 (432)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHH
Confidence 34556677888888777888888887766643 334455566666788889999999999999999998776554
No 263
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=94.78 E-value=0.0081 Score=46.01 Aligned_cols=144 Identities=13% Similarity=0.070 Sum_probs=0.0
Q ss_pred chHHHHHHHHHHHHHhhhcccccchHHH-HhhcCCCcchhhHHHHHHHH-HHHhhhhhHhHhhhhcc--chHHHHHHHHH
Q 039580 5 TLTMVLVNLAGIMERADESLLPGVYKEV-GAALCTDPTGLGSLTLFRSI-VQSSCYPLAAYLSVHHN--CAHIIALGAFL 80 (149)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~g--~~~~~~~~~~~ 80 (149)
++.+....++..........+.++.|.+ +++++.++++++++.....+ +.+++.++.|++.+|+. .|+...+..+.
T Consensus 304 Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~ 383 (539)
T PF03137_consen 304 NPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVV 383 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHH
Confidence 3455556666666666666666666655 67799999998888865554 66788889999999985 35555544444
Q ss_pred HHHHHHHH---HH-----------h----------------------------------------hhhHHHHHHHHhhhh
Q 039580 81 WAAATFLV---AI-----------S----------------------------------------TTFFQVAVSRGLNGI 106 (149)
Q Consensus 81 ~~~~~~~~---~~-----------~----------------------------------------~~~~~~~~~~~~~G~ 106 (149)
..+..+.. .+ . +.+..+++..++.-+
T Consensus 384 ~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~ 463 (539)
T PF03137_consen 384 SIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSF 463 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHH
Confidence 33333220 00 0 011223333344334
Q ss_pred HHHHHHHhHHHHHhhhcccCchhhHHHHHHHHh-hhhhhcccc
Q 039580 107 GLAIVTLAIQSLVADSTDESNRGMAFGWLQLTG-NFGSIIGGL 148 (149)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~-~~g~~igp~ 148 (149)
..+..........-+..|+++|+.+.|+..... -+|.+=||+
T Consensus 464 ~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPI 506 (539)
T PF03137_consen 464 FTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPI 506 (539)
T ss_dssp -------------------------------------------
T ss_pred HHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHH
Confidence 344444455556678889999999999865443 345555554
No 264
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=94.58 E-value=1.4 Score=32.89 Aligned_cols=96 Identities=18% Similarity=0.212 Sum_probs=73.0
Q ss_pred hhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHH--HHHHHHHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHh
Q 039580 43 LGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAF--LWAAATFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVA 120 (149)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 120 (149)
-|.+-....+..++.....|++..++.+..-+..+.. +.+...+.+...++.|..+++.++.+.......+....-++
T Consensus 287 NG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA 366 (412)
T PF01770_consen 287 NGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASFQIA 366 (412)
T ss_pred chHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4777777888888899999999777776544444333 33444556678889999999999988888888888888888
Q ss_pred hhcccCchhhHHHHHHHH
Q 039580 121 DSTDESNRGMAFGWLQLT 138 (149)
Q Consensus 121 ~~~~~~~r~~~~~~~~~~ 138 (149)
+...++.-+..+|+....
T Consensus 367 ~~l~~e~yaLVFGiNtf~ 384 (412)
T PF01770_consen 367 KNLSEERYALVFGINTFV 384 (412)
T ss_pred HhccccceeeeeeeHHHH
Confidence 888888888888875443
No 265
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=94.22 E-value=1.2 Score=34.07 Aligned_cols=96 Identities=11% Similarity=0.103 Sum_probs=71.6
Q ss_pred hhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHH--HHHHHHHHHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHh
Q 039580 43 LGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALG--AFLWAAATFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVA 120 (149)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 120 (149)
-|.+-.+..+..++..+..|++-.++.+.-.+.++ ..+.+...+++...+|.|..+++.++.+.......+....-++
T Consensus 300 NG~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~y~flitia~~~iA 379 (511)
T TIGR00806 300 NGAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGIYQFLVPIATFQIA 379 (511)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35555666777788888999987777543333333 3334444556678899999999999999999999999999999
Q ss_pred hhcccCchhhHHHHHHHH
Q 039580 121 DSTDESNRGMAFGWLQLT 138 (149)
Q Consensus 121 ~~~~~~~r~~~~~~~~~~ 138 (149)
+...++.-+..+|+.+..
T Consensus 380 ~~L~~~~~aLvFGiNtfv 397 (511)
T TIGR00806 380 SSLSKELCALVFGINTFV 397 (511)
T ss_pred HHhcccceEEEEecHHHH
Confidence 998888878888875443
No 266
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=93.84 E-value=1.9 Score=33.04 Aligned_cols=109 Identities=13% Similarity=0.077 Sum_probs=64.6
Q ss_pred CcchhhHHHHHHHH-HHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHH---------hhh---------------
Q 039580 39 DPTGLGSLTLFRSI-VQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAI---------STT--------------- 93 (149)
Q Consensus 39 ~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~---------~~~--------------- 93 (149)
+++....+=....+ +..+...+..++++|+++++++......+.......++ .++
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~ 135 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFK 135 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHH
Confidence 34444443333333 33455678999999999999887655544443333222 111
Q ss_pred -------hHHHHHHHHhhhhHHHHHHH-hHHHHHhhhcccCchhhHHHHHHHHhhhhhhccc
Q 039580 94 -------FFQVAVSRGLNGIGLAIVTL-AIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 94 -------~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp 147 (149)
.|.........-+-.....+ .-..+.+|..+.++-.|..+++..+.++|..+++
T Consensus 136 ~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG 197 (491)
T PF03219_consen 136 GFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSG 197 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111122222222222222 3467889999999999999999999999998775
No 267
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=93.07 E-value=2.3 Score=30.34 Aligned_cols=96 Identities=13% Similarity=0.060 Sum_probs=65.6
Q ss_pred hhHHHHHHHHHHHhhhhhHhHhhhhccch--HHHHHHHHHHHHHHHHHHH----hh---hhHHHHHHHHhhhhHHHHHHH
Q 039580 43 LGSLTLFRSIVQSSCYPLAAYLSVHHNCA--HIIALGAFLWAAATFLVAI----ST---TFFQVAVSRGLNGIGLAIVTL 113 (149)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~~--~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~G~~~~~~~~ 113 (149)
-|.+.+.+.++..+++-+..++..|-.+| ..+.+.....+....+... ++ ++..-.++..+.-.+.|..+|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 48899999999999999999888776543 3344444444333322211 11 233334455555667788999
Q ss_pred hHHHHHhhhcccCchhhHHHHHHHH
Q 039580 114 AIQSLVADSTDESNRGMAFGWLQLT 138 (149)
Q Consensus 114 ~~~~~~~~~~~~~~r~~~~~~~~~~ 138 (149)
....+=.+..|++.|.+.+.++..-
T Consensus 364 SimkmRsqyIPEearstimNfFRvP 388 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVP 388 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheech
Confidence 9999999999999999998886443
No 268
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=92.76 E-value=2.1 Score=32.27 Aligned_cols=56 Identities=14% Similarity=0.032 Sum_probs=45.8
Q ss_pred hhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccc
Q 039580 92 TTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 92 ~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp 147 (149)
++.+..++..++.|+..|-.......+..+..++++|..+..+....-.+|..+|.
T Consensus 370 ~~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs 425 (437)
T TIGR00939 370 PGDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGA 425 (437)
T ss_pred cccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46677778899999999988888888999999999998888777777777766654
No 269
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=91.06 E-value=1.2 Score=33.64 Aligned_cols=73 Identities=19% Similarity=0.044 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHH
Q 039580 45 SLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQS 117 (149)
Q Consensus 45 ~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~ 117 (149)
|=+.++.+...+.+...-++.||+|-|+.+..+...+.++..+....++.+.....+...|+-.+....+...
T Consensus 336 ~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~ 408 (498)
T KOG0637|consen 336 LGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYG 408 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHH
Confidence 4446677888888999999999999666666666656666666666677777777777777544444333333
No 270
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=90.96 E-value=1.3 Score=35.56 Aligned_cols=82 Identities=10% Similarity=-0.047 Sum_probs=57.3
Q ss_pred chHHHHHHHHHHHHHhhhcccccchHHH-HhhcCCCcchhhHHHHHH-HHHHHhhhhhHhHhhhhcc--chHHHHHHHHH
Q 039580 5 TLTMVLVNLAGIMERADESLLPGVYKEV-GAALCTDPTGLGSLTLFR-SIVQSSCYPLAAYLSVHHN--CAHIIALGAFL 80 (149)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~l~dr~g--~~~~~~~~~~~ 80 (149)
++.+....++..+.......+.++.|-+ .+.++.+++.+..+.... .-+.+++..+.|++..|+. .|....+.++.
T Consensus 391 N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~ 470 (735)
T KOG3626|consen 391 NPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVC 470 (735)
T ss_pred CchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHH
Confidence 4456666777777777777666666655 677999999998888554 4455677889999999985 45665555555
Q ss_pred HHHHHH
Q 039580 81 WAAATF 86 (149)
Q Consensus 81 ~~~~~~ 86 (149)
..+..+
T Consensus 471 ~~l~l~ 476 (735)
T KOG3626|consen 471 SVLSLL 476 (735)
T ss_pred HHHHHH
Confidence 444433
No 271
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=88.57 E-value=3 Score=24.91 Aligned_cols=37 Identities=8% Similarity=-0.214 Sum_probs=24.3
Q ss_pred hHHHHHHHHHHHhhhhhHhHhhhhc-cchHHHHHHHHH
Q 039580 44 GSLTLFRSIVQSSCYPLAAYLSVHH-NCAHIIALGAFL 80 (149)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~ 80 (149)
+.-.+.-.++..+.....||+.||| |.++..++.+.+
T Consensus 45 a~klssefIsGilVGa~iG~llD~~agTsPwglIv~ll 82 (116)
T COG5336 45 AFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLL 82 (116)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 3344556777777788889999998 555555444433
No 272
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=88.23 E-value=10 Score=29.21 Aligned_cols=109 Identities=8% Similarity=0.006 Sum_probs=70.2
Q ss_pred CcchhhHHHHHHHH-HHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHh---------hh-----------h---
Q 039580 39 DPTGLGSLTLFRSI-VQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAIS---------TT-----------F--- 94 (149)
Q Consensus 39 ~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~---------~~-----------~--- 94 (149)
+++...++=+..-+ +..+..++.+++.+++.+.+++..-+..+....+++++. ++ +
T Consensus 59 gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l 138 (509)
T COG3202 59 GAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFL 138 (509)
T ss_pred cchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccc
Confidence 45556666666666 566778899999999999999887666655555444330 11 1
Q ss_pred ---------HHHHHHHHhhhhHHHHHHH-hHHHHHhhhcccCchhhHHHHHHHHhhhhhhccc
Q 039580 95 ---------FQVAVSRGLNGIGLAIVTL-AIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 95 ---------~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp 147 (149)
|.........-+-...... .-.....|..+.++-.|..++++.+.+++..+++
T Consensus 139 ~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg 201 (509)
T COG3202 139 KWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSG 201 (509)
T ss_pred eeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHH
Confidence 2222222222221122222 4556789999999999999999999998877654
No 273
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=87.58 E-value=0.29 Score=37.15 Aligned_cols=47 Identities=17% Similarity=0.435 Sum_probs=40.1
Q ss_pred HhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 102 GLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 102 ~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
++.|++.-.......++.+|...|++++++.++++.....+..+||+
T Consensus 396 ~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~ 442 (488)
T KOG2325|consen 396 VVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPI 442 (488)
T ss_pred heeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHH
Confidence 45677777677788899999999999999999999888888888875
No 274
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=86.21 E-value=3.6 Score=31.66 Aligned_cols=137 Identities=10% Similarity=-0.059 Sum_probs=69.8
Q ss_pred HHHHHHHHHHhhhcccccchHHHHhh--cCCCcchhhHHH---HHHHHHHHhhhhhHhHhhhhccchHHHHHHH-HHHHH
Q 039580 10 LVNLAGIMERADESLLPGVYKEVGAA--LCTDPTGLGSLT---LFRSIVQSSCYPLAAYLSVHHNCAHIIALGA-FLWAA 83 (149)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~-~~~~~ 83 (149)
.+.+.++++..-.....-..|.+.++ -+.|-+|.+... -.+++=..=..++=....+|+||||..++=. .+.++
T Consensus 4 lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSla~~PfSlKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~g~ 83 (544)
T PF13000_consen 4 LLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSLASYPFSLKLLWAPIVDSVYSKRIGRRKSWIIPIQYLSGI 83 (544)
T ss_pred HHHHHHHHcCcccccccccchhhhccccCCCChhHheeeeeeechhHHHHhhhhhhhhhcccccCCcchhhhHHHHHHHH
Confidence 34455666666665544557777777 566666654432 3344433333334455677899999876432 22222
Q ss_pred HHHHHHHhh-------------------hhH-----HHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHh
Q 039580 84 ATFLVAIST-------------------TFF-----QVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTG 139 (149)
Q Consensus 84 ~~~~~~~~~-------------------~~~-----~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 139 (149)
..+..+... +.. .+....++.=+..+..-.++-.+.-....+++++.+..-...+.
T Consensus 84 ~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtvG~ 163 (544)
T PF13000_consen 84 LMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQTVGQ 163 (544)
T ss_pred HHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHHhHh
Confidence 222211110 000 11111111112222223455566667778888888777666666
Q ss_pred hhhhhcc
Q 039580 140 NFGSIIG 146 (149)
Q Consensus 140 ~~g~~ig 146 (149)
+.|..++
T Consensus 164 ~~Gyfls 170 (544)
T PF13000_consen 164 TAGYFLS 170 (544)
T ss_pred hhhHHHH
Confidence 6665543
No 275
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=86.09 E-value=1.9 Score=31.22 Aligned_cols=103 Identities=10% Similarity=0.058 Sum_probs=66.9
Q ss_pred chhhHHHHHHHHHHHhhhhhHhHhhhhccchH-HHHHHHHHH-----HHHHHHHHHhhhhHHHHHHHHhhhhHHHHHHHh
Q 039580 41 TGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAH-IIALGAFLW-----AAATFLVAISTTFFQVAVSRGLNGIGLAIVTLA 114 (149)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~-~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ 114 (149)
.|.-|....|.++..+.. =+-|+=+-+ .......-. .+.-...-+.++++...+.-+.-|+-.|..+..
T Consensus 288 sqYRwyqvlYQlGVFiSR-----SS~~~~~~p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVN 362 (409)
T KOG3880|consen 288 SQYRWYQVLYQLGVFISR-----SSINLFTMPYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVN 362 (409)
T ss_pred hcchhhheeeeeeEEEEe-----ccceEEechHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHH
Confidence 357788888887755432 222222222 211211111 111123345678888888888899888888887
Q ss_pred HHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 115 IQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 115 ~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
..--+.+..+|++|--+++...++-.+|..++++
T Consensus 363 Tf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~ 396 (409)
T KOG3880|consen 363 TFHNIHKETEPDVREFAMSAVSISDSIGIFLAGL 396 (409)
T ss_pred HHHHHhhcCCchHHHHhHhhheecchhhHHHHHH
Confidence 7777888888999999999988888888766543
No 276
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=85.48 E-value=13 Score=27.65 Aligned_cols=94 Identities=15% Similarity=0.179 Sum_probs=67.9
Q ss_pred hHHHHHHHHHHHhhhhhHhHhhhhccchHHHH--HHHHHHHHHHHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhh
Q 039580 44 GSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIA--LGAFLWAAATFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVAD 121 (149)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~ 121 (149)
|..=....+..++..+..|++.-++.|..-+. .+...-+...+.+.-+++.|..+++..+...-.....+....-+++
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~ 353 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIAR 353 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHH
Confidence 34445566777788889999977777653333 3333444444556677889999999888888888888888888888
Q ss_pred hcccCchhhHHHHHHH
Q 039580 122 STDESNRGMAFGWLQL 137 (149)
Q Consensus 122 ~~~~~~r~~~~~~~~~ 137 (149)
..+++.-|..+|+...
T Consensus 354 nL~~e~~gLvFGiNTF 369 (433)
T KOG3810|consen 354 NLSSELFGLVFGINTF 369 (433)
T ss_pred hhhhhhheeeeehHHH
Confidence 8888888888887543
No 277
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=83.93 E-value=3.2 Score=30.96 Aligned_cols=123 Identities=14% Similarity=0.000 Sum_probs=74.2
Q ss_pred cccchHHHHhhcC---C-CcchhhHHHHH-HHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHH-------HHhh
Q 039580 25 LPGVYKEVGAALC---T-DPTGLGSLTLF-RSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLV-------AIST 92 (149)
Q Consensus 25 ~~~~~~~~~~~~~---~-~~~~~~~~~~~-~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~-------~~~~ 92 (149)
.....|.+..+-+ . +.+-....... +.+...+|.+.+.++.++-.|+-......=...+..+.+ .+..
T Consensus 262 TLsiFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~~~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~ 341 (406)
T KOG1479|consen 262 TLSIFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWPDPRKLTIPVLLRLLFIPLFLLCNYPPLPVVFE 341 (406)
T ss_pred eeEecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCCCCceehHHHHHHHHHHHHHHHhccCCCCceec
Confidence 3345666654432 1 12222333344 778888887777777665433322222221222222221 2245
Q ss_pred hhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccc
Q 039580 93 TFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 93 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp 147 (149)
+.+.++....+.|+..|-.......+..+..|++++-.+-.+.......|...|.
T Consensus 342 ~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~ 396 (406)
T KOG1479|consen 342 SDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGS 396 (406)
T ss_pred CchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhh
Confidence 6777888899999999988888888899999888887666666666666665553
No 278
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=80.33 E-value=0.71 Score=32.89 Aligned_cols=103 Identities=17% Similarity=0.113 Sum_probs=3.5
Q ss_pred HHHHHHHHHHhhhhhHhHhhhh-ccchHHHHHH--HHHHHHHHHHH----------HHhhhhHHHHHHHHhhhhHHHHHH
Q 039580 46 LTLFRSIVQSSCYPLAAYLSVH-HNCAHIIALG--AFLWAAATFLV----------AISTTFFQVAVSRGLNGIGLAIVT 112 (149)
Q Consensus 46 ~~~~~~~~~~~~~~~~g~l~dr-~g~~~~~~~~--~~~~~~~~~~~----------~~~~~~~~~~~~~~~~G~~~~~~~ 112 (149)
....+.++-.+|..+.++..-+ ..+|++.... -+.+.-..+.+ ...++.+..++..++.|+..|-..
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl~ 266 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYLS 266 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchhh
Confidence 3456778888887777654211 1234433321 11111111111 123466777788889999999888
Q ss_pred HhHHHHHhhhcccCchhhHHHHHHHHhhhhhhcccc
Q 039580 113 LAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGGL 148 (149)
Q Consensus 113 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp~ 148 (149)
+....+..+..++++|..+-.+....-.+|-.+|..
T Consensus 267 tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ 302 (309)
T PF01733_consen 267 TLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSV 302 (309)
T ss_dssp HHHH--------------------------------
T ss_pred hceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888889999999999988877776677777666643
No 279
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=80.03 E-value=13 Score=23.80 Aligned_cols=49 Identities=22% Similarity=0.409 Sum_probs=31.5
Q ss_pred hhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhh
Q 039580 93 TFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSI 144 (149)
Q Consensus 93 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 144 (149)
++..++....+.|+| .....+..++...++++.|...|+-..-.+++.+
T Consensus 96 ~~~~~~~S~~~Fg~g---llGisYGilSaSWD~~r~GSllG~~e~~~N~~r~ 144 (153)
T PF11947_consen 96 PWAVLLVSLVFFGLG---LLGISYGILSASWDPEREGSLLGWEEFKRNWGRM 144 (153)
T ss_pred chHHHHHHHHHHHHH---HHhhhhhhcccccCCCCCCCcccHHHHHHhHHHH
Confidence 334444444444443 3344566677777888899999998877777654
No 280
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=79.17 E-value=5.7 Score=29.06 Aligned_cols=68 Identities=7% Similarity=0.037 Sum_probs=46.0
Q ss_pred HHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhh
Q 039580 54 QSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADS 122 (149)
Q Consensus 54 ~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~ 122 (149)
.+....+.+.+.+++|.|.++..+........ ..-+-+.+..++-.-...|++.+..+..--+++++.
T Consensus 71 l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyi-A~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~ 138 (390)
T KOG3097|consen 71 LIDSSMFMPLLIRFLGTKWTMVLAVFPYALYI-AANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPM 138 (390)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH-HhhcchhHHhhccHHHhhccccccccccCcceecHH
Confidence 34555566689999999999887766654432 223446677778888888998887776555554443
No 281
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=79.08 E-value=25 Score=26.45 Aligned_cols=63 Identities=11% Similarity=-0.056 Sum_probs=33.7
Q ss_pred chHHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhc
Q 039580 5 TLTMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHH 68 (149)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 68 (149)
+...+..++..+.....+..+.+..+++.+++..++. .......+.+...+...+...+--+.
T Consensus 17 ~~v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~-~~~F~~~~~~~a~i~~ll~~~~n~~~ 79 (406)
T KOG1479|consen 17 NLVYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN-SKNFTSSYTLAAQIPLLLFNLLNAFL 79 (406)
T ss_pred ccHHHHHHHHhcccccchHhhhccHHHHHhhcCCCch-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555555555556666777788888877755443 33333444444444444444443333
No 282
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=77.71 E-value=12 Score=22.06 Aligned_cols=33 Identities=12% Similarity=0.017 Sum_probs=17.5
Q ss_pred hHHHHHHHHHHHhhhhhHhHhhhhccchHHHHH
Q 039580 44 GSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIAL 76 (149)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~ 76 (149)
+.......++..++....+.+.|+.+.+..+..
T Consensus 90 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 122 (141)
T TIGR00880 90 GLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLF 122 (141)
T ss_pred HHHHHhHHHHHHHhHHhHHHHhcccchHHHHHH
Confidence 344444555555666666666666555444333
No 283
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=77.68 E-value=28 Score=26.37 Aligned_cols=120 Identities=10% Similarity=0.006 Sum_probs=66.2
Q ss_pred hhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhcc--chHH--------HHHHHHHHHHHHHHH-
Q 039580 20 ADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHN--CAHI--------IALGAFLWAAATFLV- 88 (149)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g--~~~~--------~~~~~~~~~~~~~~~- 88 (149)
..........+.-.-|.|.+.++.+.+..... +.++..+....|+. +|++ +++............
T Consensus 279 ~gf~a~da~t~LkLle~Gv~ke~Lal~~v~~~----plqI~l~~~~gk~ta~~~pl~~~lka~~~R~~~~~~~t~Lv~~~ 354 (510)
T KOG3574|consen 279 LGFQAADALTSLKLLEHGVPKEELALIAVPLV----PLQIALPLYIGKWTAGPRPLNVFLKAVPYRLGGGLVQTALVWWT 354 (510)
T ss_pred HHhhhhhhccchHHHHcCCChhHheeeeeehh----hHHHhhhhhheeecCCCCcchHHHHhhhHHHHHHHHHHHHHhhh
Confidence 33444444455556788999888877763333 33344444444432 2222 222222211111111
Q ss_pred H-Hhh-------hhHH-HHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhh
Q 039580 89 A-IST-------TFFQ-VAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGS 143 (149)
Q Consensus 89 ~-~~~-------~~~~-~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 143 (149)
. +.+ .+.. .+....+.+...-..+....+.-++..||...|+.+.+.++..++|.
T Consensus 355 ~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg 418 (510)
T KOG3574|consen 355 PTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGG 418 (510)
T ss_pred cccccCCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcC
Confidence 1 111 1222 22334444444555667778889999999999999999999999885
No 284
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=77.62 E-value=6.3 Score=23.48 Aligned_cols=49 Identities=14% Similarity=0.030 Sum_probs=38.3
Q ss_pred CcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHH
Q 039580 39 DPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFL 87 (149)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~ 87 (149)
.++..|-+...|.-.+++.+.++++..|+..+-+.=..+..+..++...
T Consensus 52 ~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~i 100 (107)
T PF02694_consen 52 QPAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAI 100 (107)
T ss_pred CcccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHh
Confidence 4467788899999999999999999999998877666666555555443
No 285
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=77.20 E-value=33 Score=26.79 Aligned_cols=45 Identities=20% Similarity=0.242 Sum_probs=37.4
Q ss_pred HHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhh
Q 039580 100 SRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSI 144 (149)
Q Consensus 100 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 144 (149)
.-.+..+..-..+.+..++-++..+|..=|+++.+.++..|+|+.
T Consensus 411 ~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGt 455 (544)
T PF13000_consen 411 QHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGT 455 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCC
Confidence 344455566677888899999999999999999999999999863
No 286
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=77.19 E-value=28 Score=26.03 Aligned_cols=86 Identities=8% Similarity=-0.002 Sum_probs=55.7
Q ss_pred cCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHH-----HHHHHHH----hhhhHHHHHHHHhhhh
Q 039580 36 LCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAA-----ATFLVAI----STTFFQVAVSRGLNGI 106 (149)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~-----~~~~~~~----~~~~~~~~~~~~~~G~ 106 (149)
+|-...|.+.+.+.|.....+++...-++.|.--..+-+..=.++..+ ......| .++-+.++++..+.|.
T Consensus 38 lG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~ 117 (508)
T COG4262 38 LGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGV 117 (508)
T ss_pred cCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 566778889999999988888888887777654433222221111111 1111122 3456777888899999
Q ss_pred HHHHHHHhHHHHHhh
Q 039580 107 GLAIVTLAIQSLVAD 121 (149)
Q Consensus 107 ~~~~~~~~~~~~~~~ 121 (149)
-.|...|....+..+
T Consensus 118 LVG~EiPL~mrml~~ 132 (508)
T COG4262 118 LVGAEIPLLMRMLQR 132 (508)
T ss_pred HHhcchHHHHHHHHH
Confidence 888888888877766
No 287
>PRK02237 hypothetical protein; Provisional
Probab=75.70 E-value=11 Score=22.54 Aligned_cols=47 Identities=11% Similarity=-0.059 Sum_probs=36.5
Q ss_pred chhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHH
Q 039580 41 TGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFL 87 (149)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~ 87 (149)
+..|-+...|.-.+++.+.++++..|+..+-+.=..|..+..++...
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~i 102 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAV 102 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHH
Confidence 45788899999999999999999999998766655666555555433
No 288
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=74.77 E-value=2.8 Score=30.87 Aligned_cols=121 Identities=11% Similarity=-0.004 Sum_probs=79.2
Q ss_pred ccccchHHHH-hhcCCCcchhh-HHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Q 039580 24 LLPGVYKEVG-AALCTDPTGLG-SLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSR 101 (149)
Q Consensus 24 ~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (149)
.-+...|+.. .+.+++..|.. -+.-...-.+.+.-.+.=.+.|...-|++++.-.+.....-.++.+.++.+..-+..
T Consensus 23 seP~~tpyl~gp~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE 102 (433)
T KOG3810|consen 23 SEPYLTPYLLGPDKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLE 102 (433)
T ss_pred CCCccchhccCCCCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeeh
Confidence 3344455554 34455544432 111112233344445555689999888988877666666667777888999888888
Q ss_pred HhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhc
Q 039580 102 GLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSII 145 (149)
Q Consensus 102 ~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i 145 (149)
+..|...+ ...+.++++-+..||+++.++.+-.....-.|...
T Consensus 103 ~FyG~~tA-aEIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~ 145 (433)
T KOG3810|consen 103 FFYGPATA-AEIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFV 145 (433)
T ss_pred hhcChHHH-HHHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHH
Confidence 88888655 55677888888999999998888765544444433
No 289
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=66.09 E-value=58 Score=24.96 Aligned_cols=109 Identities=9% Similarity=-0.081 Sum_probs=64.2
Q ss_pred cccccchHHH-HhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHH-HHHHHHHh--hhhHHHH
Q 039580 23 SLLPGVYKEV-GAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAA-ATFLVAIS--TTFFQVA 98 (149)
Q Consensus 23 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~ 98 (149)
+.-....|.+ .+++|+++++.....+.-.+...+++++.-....+.|.|--...+.....+ ........ .......
T Consensus 30 fg~~V~VPlivg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi~p~i~~~~~~g~~~~~~~ 109 (451)
T COG2233 30 FGATVLVPLLVGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFVAPMIAIGGTTGDGIAALL 109 (451)
T ss_pred HhcchHhhHHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHHHHHHHHHHHhccCCchHHHH
Confidence 3334444544 578999999999999888888888888777655444433333333333333 33333333 2355555
Q ss_pred HHHHhhhhHHHHHHHhHHHHHhhhcccCchhhH
Q 039580 99 VSRGLNGIGLAIVTLAIQSLVADSTDESNRGMA 131 (149)
Q Consensus 99 ~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~ 131 (149)
...+..|+......+.....+.+.+||-.-|..
T Consensus 110 G~ii~ag~~~~li~~~~~~~l~rlfPPvVtG~V 142 (451)
T COG2233 110 GGIIAAGLVYFLISPIVKIRLARLFPPVVTGPV 142 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeE
Confidence 555556655444444333378888888776644
No 290
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=65.71 E-value=52 Score=24.31 Aligned_cols=62 Identities=10% Similarity=-0.071 Sum_probs=36.8
Q ss_pred chHHHHHHHHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhc
Q 039580 5 TLTMVLVNLAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHH 68 (149)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 68 (149)
++.+.+.......+...+.-...+.|.+. -+-+....|++.+.++++.++++.+..++..+.
T Consensus 244 ~ril~LG~~qslFE~smy~FVflWtPaL~--~~~~~~P~GlIFssFM~a~MlGS~lf~~l~s~~ 305 (354)
T PF05631_consen 244 PRILLLGLIQSLFEGSMYLFVFLWTPALD--PDDEELPLGLIFSSFMVAMMLGSSLFSRLLSKS 305 (354)
T ss_pred chhHHHHHHHHHHHHHHHHheeeeeceec--CCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 33433433444444444333334456554 111234579999999999999999997665543
No 291
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=64.69 E-value=7.6 Score=26.68 Aligned_cols=45 Identities=11% Similarity=0.067 Sum_probs=29.4
Q ss_pred HHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhh
Q 039580 98 AVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGS 143 (149)
Q Consensus 98 ~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 143 (149)
.+.-.-.|+|.+.++++...-+.+.+| +......+....+.-+..
T Consensus 175 ~ALAMasGvGSgSMMaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~ 219 (241)
T PF11299_consen 175 YALAMASGVGSGSMMAAASGALAAAYP-EMADQILAFAAASNLLTS 219 (241)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHCc-chHHHHHHHHHHHHHHHH
Confidence 445566788888888888888888885 555555555544444433
No 292
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=63.46 E-value=67 Score=24.77 Aligned_cols=50 Identities=10% Similarity=0.154 Sum_probs=30.2
Q ss_pred hhcCCCcchh----hHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHH
Q 039580 34 AALCTDPTGL----GSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAA 83 (149)
Q Consensus 34 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~ 83 (149)
++...|+++. +.+.....+...+.+++.+++.+|+|-+....+.-+...+
T Consensus 292 ~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 292 KAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 4444455443 3333444555566677779999999987776655444333
No 293
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=63.15 E-value=11 Score=26.90 Aligned_cols=62 Identities=8% Similarity=0.003 Sum_probs=44.4
Q ss_pred HHHHHHHhhhcccccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHh---------HhhhhccchHHH
Q 039580 13 LAGIMERADESLLPGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAA---------YLSVHHNCAHII 74 (149)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---------~l~dr~g~~~~~ 74 (149)
.+.+.......++.+..-.+.++.++++......+.+..+.-++..|+.| +-.||+|||+..
T Consensus 24 vGHmlNDitAScWFTYlllfltqiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~w 94 (412)
T KOG4830|consen 24 VGHMLNDITASCWFTYLLLFLTQIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMSW 94 (412)
T ss_pred hhHHHhhHHHHHHHHHHHHHHHHhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceeee
Confidence 34444444445555555566678888888888888888898999988876 346889987763
No 294
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=62.52 E-value=43 Score=22.23 Aligned_cols=23 Identities=13% Similarity=-0.311 Sum_probs=19.2
Q ss_pred HHHHHHHHhhhhhHhHhhhhccc
Q 039580 48 LFRSIVQSSCYPLAAYLSVHHNC 70 (149)
Q Consensus 48 ~~~~~~~~~~~~~~g~l~dr~g~ 70 (149)
.-|.+++.+...+.|++.||..+
T Consensus 89 gGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 89 GGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhc
Confidence 34678888899999999999985
No 295
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=61.82 E-value=15 Score=28.91 Aligned_cols=54 Identities=17% Similarity=0.131 Sum_probs=46.1
Q ss_pred hHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhccc
Q 039580 94 FFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSIIGG 147 (149)
Q Consensus 94 ~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~igp 147 (149)
.++.+--.++.|+++........=+.-+..|++-|..+++++.....+|..+..
T Consensus 458 i~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss 511 (571)
T KOG1237|consen 458 ILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVGNYLSS 511 (571)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555678899999999999999999999999999999999999888887653
No 296
>PF05232 BTP: Bacterial Transmembrane Pair family; InterPro: IPR007896 This domain represents a conserved pair of transmembrane helices. It appears to be found as two tandem repeats in a family of hypothetical proteins.
Probab=56.06 E-value=31 Score=18.62 Aligned_cols=46 Identities=11% Similarity=-0.147 Sum_probs=34.9
Q ss_pred ccchHHHHhhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccch
Q 039580 26 PGVYKEVGAALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCA 71 (149)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 71 (149)
....|...--+|.+..+.+.......+...+-+.+..+.-||+-+|
T Consensus 19 ~~~~P~~a~~~~~~~~~a~~l~v~~s~~a~~wn~ifN~~FD~~~~r 64 (67)
T PF05232_consen 19 LISVPLIAWWLGISLWQAGALDVGLSLFAMVWNYIFNWLFDKIEPR 64 (67)
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3445666666777888888888888888888888888888888654
No 297
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=55.66 E-value=4.4 Score=29.47 Aligned_cols=74 Identities=19% Similarity=0.145 Sum_probs=48.3
Q ss_pred hhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHH
Q 039580 43 LGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQ 116 (149)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~ 116 (149)
.+.+...-.+...+....+....||+.-..=......+.+.+..+.+++++.+.-+.+..+..++.|.....-.
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL 137 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFL 137 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehh
Confidence 45566666677777777888888887643323344555666666677788888777777777666665544333
No 298
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=55.16 E-value=73 Score=22.56 Aligned_cols=94 Identities=17% Similarity=0.119 Sum_probs=46.6
Q ss_pred HHHHHHHHhhhhhHhHhhhhc-cchHHHH----HHHHHHHHHHHHH-HHh----hhhHHHHHHHHhhhhHHHHHHHhHHH
Q 039580 48 LFRSIVQSSCYPLAAYLSVHH-NCAHIIA----LGAFLWAAATFLV-AIS----TTFFQVAVSRGLNGIGLAIVTLAIQS 117 (149)
Q Consensus 48 ~~~~~~~~~~~~~~g~l~dr~-g~~~~~~----~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~G~~~~~~~~~~~~ 117 (149)
..+..+..++....|.+.... .||+.+. .+.+++.+..++. ... .+...+.+.-++.|.+.=+.+++...
T Consensus 148 I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ViL~ 227 (267)
T PF07672_consen 148 ILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQGVILN 227 (267)
T ss_pred HHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhHHHhc
Confidence 444555556656667666543 3444433 2233333333332 111 13455666777777765445554444
Q ss_pred HHhhh--cccCchhhHHHHHHHHhhhhhh
Q 039580 118 LVADS--TDESNRGMAFGWLQLTGNFGSI 144 (149)
Q Consensus 118 ~~~~~--~~~~~r~~~~~~~~~~~~~g~~ 144 (149)
+=.|. .+|++.|...|. .+++|-+
T Consensus 228 lPhEyK~~~pk~ig~~Fg~---iWGfGY~ 253 (267)
T PF07672_consen 228 LPHEYKGYNPKKIGIQFGL---IWGFGYI 253 (267)
T ss_pred ChhhhcCCCcceehhHHHH---HHHHHHH
Confidence 33333 345555655554 6666643
No 299
>COG4769 Predicted membrane protein [Function unknown]
Probab=53.54 E-value=23 Score=23.03 Aligned_cols=28 Identities=18% Similarity=0.124 Sum_probs=17.9
Q ss_pred HHHHHHhhhhhHhHhhhhccchHHHHHH
Q 039580 50 RSIVQSSCYPLAAYLSVHHNCAHIIALG 77 (149)
Q Consensus 50 ~~~~~~~~~~~~g~l~dr~g~~~~~~~~ 77 (149)
++....+.+.+.-++..++|+|..-.++
T Consensus 82 ~sfaG~i~S~L~m~~l~~f~~k~~S~lg 109 (181)
T COG4769 82 YSFAGAILSTLFMYFLYQFGPKYLSLLG 109 (181)
T ss_pred HHHHHHHHHHHHHHHHHHcCCceEeeee
Confidence 3444555566666778888888774443
No 300
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=48.78 E-value=1.2e+02 Score=23.11 Aligned_cols=47 Identities=11% Similarity=0.114 Sum_probs=26.5
Q ss_pred hHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhhhhhc
Q 039580 94 FFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNFGSII 145 (149)
Q Consensus 94 ~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i 145 (149)
++..++..++.|++.+..+....++.+ .+|++ .+..+..+.++++.+
T Consensus 106 f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~----~~~a~~~G~g~aGv~ 152 (437)
T TIGR00939 106 FVTTMASVVIINSGMALLQGSLFGLAG-VFPST----YSSAVMSGQGLAGVL 152 (437)
T ss_pred HHHHHHHHHHHHhhhhhhcccchhhcc-cCCHH----HHHHHHhcchhHHHH
Confidence 445556666777777777776666655 44433 333333444444433
No 301
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=46.97 E-value=1.1e+02 Score=22.28 Aligned_cols=96 Identities=11% Similarity=-0.019 Sum_probs=56.3
Q ss_pred hHHHHHHHHHHHhhhhhHhHhhhhccc-----hHH--HHHHHHHHHHHHHHHH--------Hh-----hhhHHHHHHHHh
Q 039580 44 GSLTLFRSIVQSSCYPLAAYLSVHHNC-----AHI--IALGAFLWAAATFLVA--------IS-----TTFFQVAVSRGL 103 (149)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~g~l~dr~g~-----~~~--~~~~~~~~~~~~~~~~--------~~-----~~~~~~~~~~~~ 103 (149)
.+......+...+..|+..++.+++.| +.. +..|.+...++.+... .. .+.++..-...+
T Consensus 254 ~~l~~~n~i~iii~~pi~~~~~~p~~~~~~~~~~~~k~~~G~~~~~~~~~~~~~v~~~r~~~~~~~~~~~~~~~~~~~~~ 333 (372)
T PF00854_consen 254 AWLQSFNPIFIIIFIPILDRVVYPLLRRGIQPSPPQKFGIGMVFAILAMFVAAIVEIRRLCYAQPCGKVSPWWQVPMYIF 333 (372)
T ss_dssp GGGTTHHHHHCHHHHHHHHHHCCCTTTT------HHHHHHH-HHHHHHHHTTTHHHH---HH----TT--THHHHHHHHH
T ss_pred chhhhHHHHHHHHHHHHHHHHHhHHhhhcccchhhhhhhHHHHHHHHHHHHHHHHHhhhhhcccccCCCChhhHHHHHHH
Confidence 444555566666777777776665443 111 2234333333332211 11 112334466777
Q ss_pred hhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHh
Q 039580 104 NGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTG 139 (149)
Q Consensus 104 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 139 (149)
+.+++-...+.......|..|++..+...+++....
T Consensus 334 ~~~~e~~l~~~g~~~~~~~a~~~~p~~m~~~~~~~~ 369 (372)
T PF00854_consen 334 WLIPEYFLSGTGESAAYEFAPSRAPSSMMGIWFALS 369 (372)
T ss_dssp HHHHHHTTTTHHHHHHHHHTTTT-SSSSTHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHhhHHhhhHHHHHHHHHHh
Confidence 888888888888889999999999999988876554
No 302
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=45.94 E-value=63 Score=19.13 Aligned_cols=29 Identities=3% Similarity=-0.124 Sum_probs=14.0
Q ss_pred HHHHhhhhhHhHhhhh-ccchHHHHHHHHH
Q 039580 52 IVQSSCYPLAAYLSVH-HNCAHIIALGAFL 80 (149)
Q Consensus 52 ~~~~~~~~~~g~l~dr-~g~~~~~~~~~~~ 80 (149)
+.-.+...+.|+..|+ ++.++.+.+.+++
T Consensus 53 v~pil~G~~lG~WLD~~~~t~~~~tl~~ll 82 (100)
T TIGR02230 53 AIPTLLGVAVGIWLDRHYPSPFSWTLTMLI 82 (100)
T ss_pred HHHHHHHHHHHHHHHhhcCCCcHHHHHHHH
Confidence 3334444555555554 5655544444333
No 303
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=45.45 E-value=1.3e+02 Score=22.54 Aligned_cols=102 Identities=8% Similarity=-0.054 Sum_probs=52.5
Q ss_pred chHHHH-hhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHH-HHHhhhhHHHHHHHHhhh
Q 039580 28 VYKEVG-AALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFL-VAISTTFFQVAVSRGLNG 105 (149)
Q Consensus 28 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~G 105 (149)
..|... +..|.|++|.........+...+++.+..+-..++|.|.-+..+.....+.... ......+.......++.|
T Consensus 14 ~~p~i~~~a~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~~~~~~~~~~~~~~~~ga~~v~G 93 (406)
T TIGR03173 14 AVPLIVGGALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVGPMIAIGAGGGLGAIFGAVIVAG 93 (406)
T ss_pred HHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHHHHHHHhhhhhHHHHHHHHHHHH
Confidence 345443 456899888888887778888888877653333455555444333222222111 111123333334444444
Q ss_pred hHHHHHHHhHHHHHhhhcccCchhh
Q 039580 106 IGLAIVTLAIQSLVADSTDESNRGM 130 (149)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~r~~ 130 (149)
+.+-... .....+.+.+|+...+.
T Consensus 94 ii~illg-~~~~~l~~~iPp~v~G~ 117 (406)
T TIGR03173 94 LFVILLA-PFFSKLVRFFPPVVTGT 117 (406)
T ss_pred HHHHHHH-HHHHHHHHHCCcHHHHH
Confidence 4333222 24445667777655553
No 304
>PF11298 DUF3099: Protein of unknown function (DUF3099); InterPro: IPR021449 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=44.13 E-value=56 Score=18.08 Aligned_cols=31 Identities=6% Similarity=-0.107 Sum_probs=19.7
Q ss_pred HhhhhccchHHHHHHHHHHHHHHHHHHHhhh
Q 039580 63 YLSVHHNCAHIIALGAFLWAAATFLVAISTT 93 (149)
Q Consensus 63 ~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~ 93 (149)
.--|+-.|++-+.+.+.+-..++++..+...
T Consensus 9 ~~~d~~~R~r~Y~i~M~~Ri~~fvlA~~~~~ 39 (73)
T PF11298_consen 9 LSQDQRRRRRRYLIMMGIRIPCFVLAAVVYR 39 (73)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3456667777777777776666665555443
No 305
>PLN02878 homogentisate phytyltransferase
Probab=44.08 E-value=1.2e+02 Score=21.74 Aligned_cols=74 Identities=15% Similarity=0.057 Sum_probs=38.0
Q ss_pred hccchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhhhHHHHHHHhHHHHHhhhcccCchhhHHHHHHHHhhh
Q 039580 67 HHNCAHIIALGAFLWAAATFLVAISTTFFQVAVSRGLNGIGLAIVTLAIQSLVADSTDESNRGMAFGWLQLTGNF 141 (149)
Q Consensus 67 r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 141 (149)
|+|+|+...++..+..++........-.........+...++.... ...-.-++..+.+++....+.++..|.+
T Consensus 195 ~lG~~~~~~i~~~ll~~aY~~~i~~g~~~~~~~~~~~~~~~h~~l~-~~L~~rs~~vD~~sk~~i~~fY~fiwkl 268 (280)
T PLN02878 195 RLGQKRVFWLCVNLLEMAYAAAILVGASSSFLWSKIITVLGHGILA-SILWQRAQSVDLSSKAAITSFYMFIWKL 268 (280)
T ss_pred hhChHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH-HHHHHHhHhcCcccHHHHHHHHHHHHHH
Confidence 4788888877776666655432222111111223333444444322 2222334555667777777777766654
No 306
>PF13493 DUF4118: Domain of unknown function (DUF4118); PDB: 2KSF_A.
Probab=43.88 E-value=35 Score=19.75 Aligned_cols=21 Identities=14% Similarity=-0.017 Sum_probs=10.2
Q ss_pred HHHHHhhhhhHhHhhhhccch
Q 039580 51 SIVQSSCYPLAAYLSVHHNCA 71 (149)
Q Consensus 51 ~~~~~~~~~~~g~l~dr~g~~ 71 (149)
.....+.+.+.|.+.||..||
T Consensus 85 ~~~~l~va~v~g~l~~~~r~~ 105 (105)
T PF13493_consen 85 FAVFLVVALVTGYLADRYRRQ 105 (105)
T ss_dssp HHHHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHHHHhhC
Confidence 344445555666666666543
No 307
>PF04117 Mpv17_PMP22: Mpv17 / PMP22 family ; InterPro: IPR007248 The 22 kDa peroxisomal membrane protein (PMP22) is a major component of peroxisomal membranes. PMP22 seems to be involved in pore-forming activity and may contribute to the unspecific permeability of the organelle membrane. PMP22 is synthesised on free cytosolic ribosomes and then directed to the peroxisome membrane by specific targeting information []. Mpv17 is a closely related peroxisomal protein involved in the development of early-onset glomerulosclerosis []. A member of this family found in Saccharomyces cerevisiae (Baker's yeast) is an integral membrane protein of the inner mitochondrial membrane and has been suggested to play a role in mitochondrial function during heat shock [].; GO: 0016021 integral to membrane
Probab=42.63 E-value=45 Score=17.76 Aligned_cols=32 Identities=9% Similarity=-0.163 Sum_probs=24.5
Q ss_pred HHHHhHHHHHhhhcccCchhhHHHHHHHHhhh
Q 039580 110 IVTLAIQSLVADSTDESNRGMAFGWLQLTGNF 141 (149)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 141 (149)
..+|..+...-...|++.|....++.+..++.
T Consensus 29 ~~Wp~~~~vnF~~vP~~~Rv~~~~~v~~~W~~ 60 (68)
T PF04117_consen 29 KFWPPAQIVNFRYVPPHYRVLFVNVVSFFWNT 60 (68)
T ss_pred HhHHHHHHHHhcccChhhhhhhhhhHHHHHHH
Confidence 35677777777888999999888887776654
No 308
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=40.57 E-value=1.7e+02 Score=22.47 Aligned_cols=71 Identities=11% Similarity=-0.045 Sum_probs=48.2
Q ss_pred HHHHHHHHHHhhhcccccchHHHHhhcC-CCcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHH
Q 039580 10 LVNLAGIMERADESLLPGVYKEVGAALC-TDPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFL 80 (149)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~ 80 (149)
.+..+++.....--++......+..+++ -+-...+.....-.....+..++.|...|+..|+|++..-+.+
T Consensus 31 ~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~l 102 (503)
T KOG2601|consen 31 FLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLL 102 (503)
T ss_pred hhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhh
Confidence 4455666666555556655555554544 3445556666666777888899999999999999998765544
No 309
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=39.18 E-value=1e+02 Score=19.60 Aligned_cols=24 Identities=4% Similarity=-0.249 Sum_probs=19.8
Q ss_pred HHHHHHHHhhhhhHhHhhhhccch
Q 039580 48 LFRSIVQSSCYPLAAYLSVHHNCA 71 (149)
Q Consensus 48 ~~~~~~~~~~~~~~g~l~dr~g~~ 71 (149)
.-|.++..+...+.|++.||..++
T Consensus 60 gGyl~gf~~~a~i~g~~~~~~~~~ 83 (148)
T PF02632_consen 60 GGYLLGFPLAALIIGLLAERLKRS 83 (148)
T ss_pred ChHHHHHHHHHHHHHHHHHhcccc
Confidence 446788888899999999998775
No 310
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=37.74 E-value=1.8e+02 Score=21.97 Aligned_cols=40 Identities=8% Similarity=-0.094 Sum_probs=30.3
Q ss_pred chHHHH-hhcCCCcchhhHHHHHHHHHHHhhhhhHhHhhhhc
Q 039580 28 VYKEVG-AALCTDPTGLGSLTLFRSIVQSSCYPLAAYLSVHH 68 (149)
Q Consensus 28 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 68 (149)
..|.+. ... +|+++.........+...+++.+-+...++.
T Consensus 24 ~~p~iv~~~~-l~~~~~~~li~at~~~sgi~Tllq~~~~~~~ 64 (415)
T TIGR00801 24 LVPLLVGLAP-LSAEQTQYLVSISLLTSGIGTLLQLFRTGGQ 64 (415)
T ss_pred HHHHHHhccc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhcCc
Confidence 345443 445 8888888888888888999999888777654
No 311
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=35.18 E-value=2.2e+02 Score=22.23 Aligned_cols=37 Identities=11% Similarity=0.142 Sum_probs=26.1
Q ss_pred hHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHH
Q 039580 44 GSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFL 80 (149)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~ 80 (149)
|...+..++...+.+.+.+++.+|+|-+....+.-..
T Consensus 322 G~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv 358 (491)
T PF03219_consen 322 GKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIV 358 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHH
Confidence 4444555666677778889999999987776664333
No 312
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=34.73 E-value=95 Score=23.11 Aligned_cols=71 Identities=17% Similarity=0.149 Sum_probs=47.2
Q ss_pred CcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHH-HHHHH---hhhhHHHHHHHHhhhhHHH
Q 039580 39 DPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAAT-FLVAI---STTFFQVAVSRGLNGIGLA 109 (149)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~G~~~~ 109 (149)
..++.+.....+.+..++.+.+.|.+..++||-+....+...--.-. ..... ..+.+.+.+.-.++|.+-+
T Consensus 308 Gv~~igf~m~cfgv~~Av~S~~~g~L~~~~gr~~~~v~gavv~l~li~~~~~w~~~~~~~~i~y~~aalwgv~d~ 382 (390)
T KOG3097|consen 308 GVSRIGFAMACFGVGDAVASSLFGLLGKWIGRPPLLVLGAVVHLLLITILFFWAPNPQDSWIFYVAAALWGVGDA 382 (390)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHHHhcccCCCCceEEEeehhhcCccHH
Confidence 34578888999999999999999999999999888776654432221 22211 2244555555556666544
No 313
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=31.89 E-value=1.8e+02 Score=20.32 Aligned_cols=6 Identities=0% Similarity=-0.036 Sum_probs=3.0
Q ss_pred Hhhhcc
Q 039580 119 VADSTD 124 (149)
Q Consensus 119 ~~~~~~ 124 (149)
..+..|
T Consensus 57 ~~k~lP 62 (249)
T PF10225_consen 57 LSKLLP 62 (249)
T ss_pred HHHHcc
Confidence 445554
No 314
>COG4890 Predicted outer membrane lipoprotein [Function unknown]
Probab=29.55 E-value=67 Score=14.84 Aligned_cols=25 Identities=24% Similarity=0.260 Sum_probs=13.7
Q ss_pred hhHHHHHHHhHHHHHhhhcccCchh
Q 039580 105 GIGLAIVTLAIQSLVADSTDESNRG 129 (149)
Q Consensus 105 G~~~~~~~~~~~~~~~~~~~~~~r~ 129 (149)
|.-.+..+...+++--|..+.+.|.
T Consensus 9 G~lLAcAFgiinAlwlEh~e~~~~~ 33 (37)
T COG4890 9 GLLLACAFGIINALWLEHMEDRARK 33 (37)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 4444455556666666666554444
No 315
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=28.63 E-value=45 Score=19.91 Aligned_cols=45 Identities=11% Similarity=-0.061 Sum_probs=30.9
Q ss_pred CcchhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHH
Q 039580 39 DPTGLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAA 83 (149)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~ 83 (149)
++...|-....|.-.+++.+..+++..|+.-+-+.=..|..+..+
T Consensus 53 ~~~a~GRvYAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~ 97 (109)
T COG1742 53 PAAAFGRVYAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLA 97 (109)
T ss_pred CchhhhhHHHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHh
Confidence 344467777778888888888999998888766554455444333
No 316
>TIGR00123 cbiM cobalamin biosynthesis protein CbiM. In Methanobacterium thermoautotrophicum, Archaeoglobus fulgidus, and Methanococcus jannaschii, a second homolog of cbiM is also found. These cbiM-related proteins appear to represent a distinct but less well-conserved orthologous group. Still more distant homologs include sll0383 from Synechocystis sp. and HI1621 from Haemophilus influenzae; the latter protein, from a species that does not synthesize cobalamin, is the most divergent member of the group. The functions of and relationships among the set of proteins homologous to cbiM have not been determined.
Probab=27.66 E-value=2e+02 Score=19.55 Aligned_cols=27 Identities=11% Similarity=0.137 Sum_probs=19.6
Q ss_pred HHHHhhhhHHHHHHHhHHHHHhhhccc
Q 039580 99 VSRGLNGIGLAIVTLAIQSLVADSTDE 125 (149)
Q Consensus 99 ~~~~~~G~~~~~~~~~~~~~~~~~~~~ 125 (149)
......|+.+|........++.+.-|+
T Consensus 184 ~~h~~~~i~Eg~iT~~~~~~l~~~~p~ 210 (214)
T TIGR00123 184 YTQVPLAIAEGLLTVMIYDYITKLRPD 210 (214)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCHH
Confidence 334567888998888888887777543
No 317
>PF06826 Asp-Al_Ex: Predicted Permease Membrane Region; InterPro: IPR006512 These sequences contain a domain that is duplicated in HI0035 of Haemophilus influenzae, in YidE and YbjL of Escherichia coli, and in a number of other putative transporters. Member proteins may have 0, 1, or 2 copies of the TrkA-C potassium uptake domain (IPR006037 from INTERPRO) between the duplications. The duplication appears distantly related to both the N- and the C-terminal domains the sodium/hydrogen exchanger family domain (IPR006153 from INTERPRO). The domain contains several apparent transmembrane regions and is proposed here to act in transport.
Probab=26.99 E-value=1.9e+02 Score=18.91 Aligned_cols=86 Identities=13% Similarity=0.150 Sum_probs=44.9
Q ss_pred hhhHHHHHHHHHHHhhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHhhhh-HHHHHHHhHHHHH
Q 039580 42 GLGSLTLFRSIVQSSCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTT-FFQVAVSRGLNGI-GLAIVTLAIQSLV 119 (149)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~G~-~~~~~~~~~~~~~ 119 (149)
+.++....+.++.-.+.-+..-+.++ |-| ....+.+...++.+....... ...+-.. ...|. ..+...+......
T Consensus 57 ~~GL~lFl~~VGl~aG~~F~~~l~~~-G~~-~~~~~~~i~~~~~~~~~~~~~~~~~l~~~-~~~G~~aGa~T~tp~L~~A 133 (169)
T PF06826_consen 57 QLGLALFLAAVGLSAGPGFFSSLKRG-GLK-LLLLGVIITLVPLLIALVIGRYLFKLNPG-IAAGILAGALTSTPALAAA 133 (169)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-hHH-HHHHHHHHHHHHHHHHHHHHHHHcCCCHH-HHHHHHHccccCcHHHHHH
Confidence 45777788888888887777777665 544 444555555554433322211 1111111 22232 3334456666777
Q ss_pred hhhcccCchhh
Q 039580 120 ADSTDESNRGM 130 (149)
Q Consensus 120 ~~~~~~~~r~~ 130 (149)
.|...+++...
T Consensus 134 ~~~~~~~~~~~ 144 (169)
T PF06826_consen 134 QEAISDSGIPA 144 (169)
T ss_pred HHhhhcCCCch
Confidence 77744444443
No 318
>PF12911 OppC_N: N-terminal TM domain of oligopeptide transport permease C
Probab=26.35 E-value=99 Score=15.51 Aligned_cols=24 Identities=4% Similarity=0.027 Sum_probs=13.9
Q ss_pred HhhhhccchHHHHHHHHHHHHHHH
Q 039580 63 YLSVHHNCAHIIALGAFLWAAATF 86 (149)
Q Consensus 63 ~l~dr~g~~~~~~~~~~~~~~~~~ 86 (149)
..-+|+-|.|..++|+.+..+-.+
T Consensus 7 ~~~~~f~~nk~a~~gl~il~~~vl 30 (56)
T PF12911_consen 7 DAWRRFRRNKLAVIGLIILLILVL 30 (56)
T ss_pred HHHHHHHhCchHHHHHHHHHHHHH
Confidence 445566666666666665544433
No 319
>PRK12887 ubiA tocopherol phytyltransferase; Reviewed
Probab=25.96 E-value=2.6e+02 Score=20.20 Aligned_cols=24 Identities=8% Similarity=0.097 Sum_probs=16.1
Q ss_pred HHhhhcccCchhhHHHHHHHHhhh
Q 039580 118 LVADSTDESNRGMAFGWLQLTGNF 141 (149)
Q Consensus 118 ~~~~~~~~~~r~~~~~~~~~~~~~ 141 (149)
+-....+.+++....+.++..|.+
T Consensus 271 ~~~~~~~~~~~~~~~~~y~~iw~l 294 (308)
T PRK12887 271 WRSQRVDLQDKQAIAQFYQFIWKL 294 (308)
T ss_pred HHHhhcCcccchHHHHHHHHHHHH
Confidence 345556667788888887766643
No 320
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=25.94 E-value=1.6e+02 Score=17.70 Aligned_cols=66 Identities=12% Similarity=-0.009 Sum_probs=36.2
Q ss_pred hhhhhHhHhhhhccchHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHhhhhHHHHHHHhHHHHHhh
Q 039580 56 SCYPLAAYLSVHHNCAHIIALGAFLWAAATFLVAISTT-FFQVAVSRGLNGIGLAIVTLAIQSLVAD 121 (149)
Q Consensus 56 ~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~G~~~~~~~~~~~~~~~~ 121 (149)
+..-..=+.+|.+.|+...........++..+++.+-. ...=.+--.-.|+|..........+..|
T Consensus 15 V~~~~~lK~s~gf~~~~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E 81 (106)
T COG2076 15 VVGTTLLKYSDGFTRLWPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGE 81 (106)
T ss_pred HHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 33345557889888887777777777777777665532 2222222233455544443333333333
No 321
>PRK03612 spermidine synthase; Provisional
Probab=25.03 E-value=3.4e+02 Score=21.29 Aligned_cols=15 Identities=13% Similarity=0.018 Sum_probs=5.7
Q ss_pred hhHHHHHHHHhhhhh
Q 039580 129 GMAFGWLQLTGNFGS 143 (149)
Q Consensus 129 ~~~~~~~~~~~~~g~ 143 (149)
|+..+....+..+|.
T Consensus 148 g~ly~~ntlGa~~G~ 162 (521)
T PRK03612 148 ATVLAADYLGALVGG 162 (521)
T ss_pred hhhHhHHhHHHHHHH
Confidence 333333333333333
No 322
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=23.51 E-value=1.6e+02 Score=16.84 Aligned_cols=40 Identities=15% Similarity=0.168 Sum_probs=23.6
Q ss_pred HHhhhhhHhHhhhhccc-------hHHHHHHHHHHHHHHHHHHHhhh
Q 039580 54 QSSCYPLAAYLSVHHNC-------AHIIALGAFLWAAATFLVAISTT 93 (149)
Q Consensus 54 ~~~~~~~~g~l~dr~g~-------~~~~~~~~~~~~~~~~~~~~~~~ 93 (149)
.....+..+++.+|..+ ++.+..+..+...+.++++..++
T Consensus 31 ~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS 77 (86)
T PF10785_consen 31 ATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRS 77 (86)
T ss_pred HHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 34455677777777665 56666666665555555544443
No 323
>PF06939 DUF1286: Protein of unknown function (DUF1286); InterPro: IPR009705 This entry is represented by Sulfolobus virus STSV1, Orf8. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several hypothetical archaeal proteins of around 120 residues in length. All members of this family seem to be Sulfolobus species specific. The function of this family is unknown.
Probab=23.38 E-value=91 Score=18.87 Aligned_cols=18 Identities=11% Similarity=-0.127 Sum_probs=13.0
Q ss_pred HHhhhhhHhHhhhhccch
Q 039580 54 QSSCYPLAAYLSVHHNCA 71 (149)
Q Consensus 54 ~~~~~~~~g~l~dr~g~~ 71 (149)
..+.+..+..+.||.|.|
T Consensus 32 s~iiSvl~N~lID~lGH~ 49 (114)
T PF06939_consen 32 SGIISVLGNTLIDRLGHK 49 (114)
T ss_pred HHHHHHHHHHHHHhcccH
Confidence 345566778889999873
No 324
>PF13940 Ldr_toxin: Toxin Ldr, type I toxin-antitoxin system
Probab=22.41 E-value=1e+02 Score=14.21 Aligned_cols=19 Identities=11% Similarity=0.011 Sum_probs=10.5
Q ss_pred HHHHHHHhhhhhHhHhhhh
Q 039580 49 FRSIVQSSCYPLAAYLSVH 67 (149)
Q Consensus 49 ~~~~~~~~~~~~~g~l~dr 67 (149)
...++.++.+.+.+|+-+|
T Consensus 16 AP~iagIi~s~iv~w~~~R 34 (35)
T PF13940_consen 16 APIIAGIIASLIVGWLRNR 34 (35)
T ss_pred hHHHHHHHHHHHHHHHHhc
Confidence 3445555566666666554
No 325
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.52 E-value=1.2e+02 Score=19.46 Aligned_cols=19 Identities=11% Similarity=-0.011 Sum_probs=14.7
Q ss_pred HHHHHhhhhhHhHhhhhcc
Q 039580 51 SIVQSSCYPLAAYLSVHHN 69 (149)
Q Consensus 51 ~~~~~~~~~~~g~l~dr~g 69 (149)
......++.+.|.+.|++|
T Consensus 99 ~~l~i~gQli~glliD~fG 117 (150)
T COG3238 99 IALVIAGQLIMGLLIDHFG 117 (150)
T ss_pred HHHHHHHHHHHHHHHHhhc
Confidence 3344577889999999998
No 326
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=20.35 E-value=3e+02 Score=22.41 Aligned_cols=17 Identities=6% Similarity=0.157 Sum_probs=6.9
Q ss_pred hhHHHHHHHHHHHhhhh
Q 039580 43 LGSLTLFRSIVQSSCYP 59 (149)
Q Consensus 43 ~~~~~~~~~~~~~~~~~ 59 (149)
..++.....+..++..|
T Consensus 282 ~~~lq~~n~L~IIil~P 298 (654)
T TIGR00926 282 PDQMQVVNPLLILIFVP 298 (654)
T ss_pred HHHHHHHHHHHHHHhHH
Confidence 33444444444444333
Done!