Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>039581
MAVSPESLPEKPLDFRAPPPSPIASGRRSCVTNDDVLTEFLEHSLRVPDLILPDKVFPRQ
KFIENPPSIDFQSLRSMQSDAVSKLLDSIATIGCFQLVNYGVPVEFINSTMATAGGVFGV
SSEKRAAVTRSPEKPYGFEEVHGEEEENEFSEEFVWCRDESLKQEMEGVWPLGYSKFSEK
IETLMLDMEKVAEKILQVVRENSERKSVNRNCMEQEQENVGSVCYLYRHCRDVPADSSSL
RYDVIRMLIRGVDFSHALCLHICDGASEFHVYSKKGIWWWAVEACNRKANI

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  039581
        (291 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2017839 - symbol:DTA4 "AT1G79760" species:3702...   299  6.5e-39   2
TAIR|locus:2057130 - symbol:AT2G38500 "AT2G38500" species...   200  2.4e-15   1


>TAIR|locus:2017839 [details] [associations]
            symbol:DTA4 "AT1G79760" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002684 EMBL:AC011717 EMBL:BT012650
            EMBL:AK176480 IPI:IPI00535804 PIR:F96828 RefSeq:NP_178094.1
            UniGene:At.34052 ProteinModelPortal:Q9CA84 PRIDE:Q9CA84
            EnsemblPlants:AT1G79760.1 GeneID:844315 KEGG:ath:AT1G79760
            eggNOG:NOG266270 OMA:SSRCSRA ProtClustDB:CLSN2719044
            ArrayExpress:Q9CA84 Genevestigator:Q9CA84 Uniprot:Q9CA84
        Length = 299

 Score = 299 (110.3 bits), Expect = 6.5e-39, Sum P(2) = 6.5e-39
 Identities = 59/99 (59%), Positives = 75/99 (75%)

Query:    14 DFRAPPPSPIASGRRSCVT-NDDVLTEFLEHSLRVPDLILPDKVFPRQKFIENPPSIDFQ 72
             DFRAPPPSP+AS RR+  T N+DVL+EFL+   RVP+L+LPDKVFP+  F+ NPP+ DF 
Sbjct:     7 DFRAPPPSPVASSRRASFTANEDVLSEFLDKCGRVPNLVLPDKVFPKHTFLLNPPTFDFH 66

Query:    73 SLRSMQSDAVSKLLDSIATIGCFQLVNYGVPVEFINSTM 111
              L     D++S LLD+IATIGCFQLVN+GVP   + + M
Sbjct:    67 RL-----DSLSALLDAIATIGCFQLVNHGVPEAMVKAAM 100

 Score = 133 (51.9 bits), Expect = 6.5e-39, Sum P(2) = 6.5e-39
 Identities = 37/87 (42%), Positives = 54/87 (62%)

Query:   192 AEKILQVVRENSERKSVNRNCMEQEQENVGSVCYLYRHCRDVPADSSSLRYDVIRMLIRG 251
             AE+I + VRE  +  +  R+    ++E VG VCY+ RH  ++  +S     + IRML+RG
Sbjct:   137 AERIGKAVRE--KLGAGGRS----QKEGVG-VCYVKRH--NIKNESKE---EAIRMLLRG 184

Query:   252 VDFSHALCLHICDGASEFHVYSKKGIW 278
              D  H+LCL+ C   +EFHVYSK+G W
Sbjct:   185 YDERHSLCLNFCH--AEFHVYSKRG-W 208


>TAIR|locus:2057130 [details] [associations]
            symbol:AT2G38500 "AT2G38500" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002685 EMBL:BT006246 EMBL:AK117928
            IPI:IPI00521009 RefSeq:NP_181384.2 UniGene:At.37289
            ProteinModelPortal:Q8GY13 PRIDE:Q8GY13 EnsemblPlants:AT2G38500.1
            GeneID:818432 KEGG:ath:AT2G38500 TAIR:At2g38500
            HOGENOM:HOG000091090 InParanoid:Q8GY13 OMA:GPLSFHA PhylomeDB:Q8GY13
            ProtClustDB:CLSN2680112 Genevestigator:Q8GY13 Uniprot:Q8GY13
        Length = 356

 Score = 200 (75.5 bits), Expect = 2.4e-15, P = 2.4e-15
 Identities = 65/217 (29%), Positives = 101/217 (46%)

Query:    18 PPPSPIASGRRSCVTNDDVLTEFLEHSLRVPDLILPDKVFPRQKFIEN---PPSIDFQSL 74
             PPPSPI   R S     ++LTE +E S++VP+L LP+     +        P  IDF+ L
Sbjct:    20 PPPSPIPRARGSRCAASEILTEIIERSIQVPELTLPESHSGGESCGSRHLIPAEIDFRLL 79

Query:    75 RSMQSDAVSKLLDSIATIGCFQLVNYGVPVEFINSTMATAGGVFGVSSEKRAAVTRSPEK 134
              S +  +V +L+ S    G F++  +G+  E + S +  +G VFGV   +     RS   
Sbjct:    80 ASRREGSVDRLVRSAREFGAFRVSYHGISGEELRSLVRESGRVFGVLEGRDTGFHRS--- 136

Query:   135 PYGXXXXXXXXXXXXXXXXXVWCRD--ESLKQEMEGVWPLGYSKFSEKIETLMLDMEKVA 192
                                 VW R   E ++   E + P  Y  FS+++E +   +E +A
Sbjct:   137 ------------VVGNRDEIVWVRSWKERMEWAREYIGPERYRCFSQEMENVADKLEDIA 184

Query:   193 EKILQVVRENSERKSVNRNCMEQEQENVGSVCYLYRH 229
              K+ Q++ ENS R +  +    Q  E+V SV Y Y H
Sbjct:   185 RKLGQIMVENSRRPNDKKI---QRGESVLSV-YRYNH 217


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.134   0.411    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      291       274   0.00078  115 3  11 22  0.49    33
                                                     33  0.40    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  604 (64 KB)
  Total size of DFA:  205 KB (2114 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  25.53u 0.09s 25.62t   Elapsed:  00:00:02
  Total cpu time:  25.53u 0.09s 25.62t   Elapsed:  00:00:02
  Start:  Sat May 11 07:49:03 2013   End:  Sat May 11 07:49:05 2013

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