Query 039591
Match_columns 284
No_of_seqs 285 out of 2132
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 19:13:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039591.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039591hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fpf_A Mtnas, putative unchara 100.0 5.4E-45 1.9E-49 328.2 23.3 253 17-282 5-264 (298)
2 4gek_A TRNA (CMO5U34)-methyltr 99.7 1.9E-16 6.3E-21 140.5 15.3 128 105-240 49-178 (261)
3 3ntv_A MW1564 protein; rossman 99.6 1.4E-15 4.7E-20 132.0 12.5 105 129-240 70-176 (232)
4 3dr5_A Putative O-methyltransf 99.6 6.7E-16 2.3E-20 133.5 10.4 104 131-240 57-163 (221)
5 3p9n_A Possible methyltransfer 99.6 1.3E-14 4.4E-19 121.5 17.5 109 128-241 42-154 (189)
6 3ocj_A Putative exported prote 99.6 1.4E-15 4.9E-20 136.9 12.2 110 128-240 116-227 (305)
7 2xvm_A Tellurite resistance pr 99.6 7E-15 2.4E-19 123.0 15.5 105 129-240 31-136 (199)
8 3orh_A Guanidinoacetate N-meth 99.6 1.6E-15 5.5E-20 132.1 11.6 110 125-240 55-170 (236)
9 3u81_A Catechol O-methyltransf 99.6 2.5E-15 8.5E-20 129.1 12.0 108 129-240 57-170 (221)
10 1pjz_A Thiopurine S-methyltran 99.6 1.9E-15 6.5E-20 128.6 10.5 108 127-238 19-138 (203)
11 3tfw_A Putative O-methyltransf 99.6 6.1E-15 2.1E-19 129.3 14.0 106 129-241 62-171 (248)
12 3dh0_A SAM dependent methyltra 99.6 1E-14 3.5E-19 124.3 15.0 151 126-282 33-193 (219)
13 3duw_A OMT, O-methyltransferas 99.6 6.1E-15 2.1E-19 126.4 13.2 105 129-240 57-167 (223)
14 3e05_A Precorrin-6Y C5,15-meth 99.6 1.3E-14 4.3E-19 122.9 14.4 108 125-240 35-142 (204)
15 3mti_A RRNA methylase; SAM-dep 99.6 1.3E-14 4.5E-19 120.7 14.2 108 128-241 20-136 (185)
16 1sui_A Caffeoyl-COA O-methyltr 99.6 4.9E-15 1.7E-19 130.1 11.8 105 129-240 78-190 (247)
17 2gb4_A Thiopurine S-methyltran 99.6 9.1E-15 3.1E-19 128.9 13.5 107 129-239 67-190 (252)
18 3njr_A Precorrin-6Y methylase; 99.6 2.6E-14 9E-19 121.7 15.6 106 124-240 49-154 (204)
19 3tr6_A O-methyltransferase; ce 99.6 6.9E-15 2.4E-19 126.1 11.8 105 129-240 63-174 (225)
20 3c3y_A Pfomt, O-methyltransfer 99.6 5.5E-15 1.9E-19 128.8 11.3 106 129-241 69-182 (237)
21 3cbg_A O-methyltransferase; cy 99.6 1E-14 3.4E-19 126.6 12.7 106 129-241 71-183 (232)
22 3r3h_A O-methyltransferase, SA 99.6 1.1E-15 3.7E-20 133.9 6.4 105 129-240 59-170 (242)
23 1jsx_A Glucose-inhibited divis 99.6 2.3E-14 8E-19 121.1 14.3 138 130-282 65-205 (207)
24 3hm2_A Precorrin-6Y C5,15-meth 99.6 2.3E-14 7.9E-19 117.9 13.9 106 126-240 21-127 (178)
25 3m70_A Tellurite resistance pr 99.6 4.8E-14 1.7E-18 125.4 16.6 104 129-240 119-223 (286)
26 3eey_A Putative rRNA methylase 99.6 4.9E-14 1.7E-18 118.3 15.6 111 128-240 20-139 (197)
27 1xdz_A Methyltransferase GIDB; 99.6 7.4E-15 2.5E-19 127.8 10.8 143 129-281 69-218 (240)
28 3lcc_A Putative methyl chlorid 99.6 1.7E-14 5.8E-19 124.6 12.9 106 129-240 65-171 (235)
29 3jwg_A HEN1, methyltransferase 99.6 3.7E-14 1.3E-18 121.0 14.7 109 129-240 28-141 (219)
30 3c3p_A Methyltransferase; NP_9 99.6 1.2E-14 4E-19 123.7 11.0 104 129-240 55-160 (210)
31 1nkv_A Hypothetical protein YJ 99.6 1.4E-14 4.7E-19 126.4 11.3 108 127-240 33-140 (256)
32 3lec_A NADB-rossmann superfami 99.6 4.2E-14 1.4E-18 122.8 14.0 109 129-243 20-128 (230)
33 3kr9_A SAM-dependent methyltra 99.6 4E-14 1.4E-18 122.6 13.9 109 129-243 14-122 (225)
34 3jwh_A HEN1; methyltransferase 99.6 6.2E-14 2.1E-18 119.6 14.9 109 129-240 28-141 (217)
35 3g89_A Ribosomal RNA small sub 99.6 1.8E-14 6E-19 126.8 11.8 140 129-281 79-228 (249)
36 3kkz_A Uncharacterized protein 99.6 2E-14 6.9E-19 126.6 12.2 106 129-240 45-150 (267)
37 3f4k_A Putative methyltransfer 99.6 2.5E-14 8.7E-19 124.8 12.4 106 129-240 45-150 (257)
38 2gpy_A O-methyltransferase; st 99.6 8.7E-15 3E-19 126.5 9.1 105 129-240 53-160 (233)
39 1y8c_A S-adenosylmethionine-de 99.6 7.2E-14 2.5E-18 120.5 14.7 104 129-240 36-142 (246)
40 3bus_A REBM, methyltransferase 99.6 7.1E-14 2.4E-18 123.1 14.9 110 126-240 57-166 (273)
41 2avd_A Catechol-O-methyltransf 99.5 2.4E-14 8.4E-19 123.0 11.3 105 129-240 68-179 (229)
42 3g5t_A Trans-aconitate 3-methy 99.5 3.8E-14 1.3E-18 127.1 12.8 113 123-238 29-147 (299)
43 3dlc_A Putative S-adenosyl-L-m 99.5 2.3E-14 8E-19 121.3 10.8 105 131-240 44-148 (219)
44 3dtn_A Putative methyltransfer 99.5 4E-14 1.4E-18 121.9 12.1 105 129-240 43-148 (234)
45 3mb5_A SAM-dependent methyltra 99.5 4.5E-14 1.5E-18 123.4 12.5 147 127-282 90-253 (255)
46 3e8s_A Putative SAM dependent 99.5 3.3E-14 1.1E-18 121.1 10.5 99 128-240 50-152 (227)
47 2hnk_A SAM-dependent O-methylt 99.5 3.6E-14 1.2E-18 123.3 10.4 105 129-240 59-181 (239)
48 3gjy_A Spermidine synthase; AP 99.5 1.5E-14 5.1E-19 131.3 8.1 144 131-281 90-246 (317)
49 3grz_A L11 mtase, ribosomal pr 99.5 1.6E-13 5.4E-18 116.0 13.9 129 129-272 59-189 (205)
50 1vl5_A Unknown conserved prote 99.5 6E-14 2.1E-18 122.9 11.6 107 127-240 34-140 (260)
51 4htf_A S-adenosylmethionine-de 99.5 1.3E-13 4.3E-18 122.6 13.4 106 129-240 67-173 (285)
52 3g5l_A Putative S-adenosylmeth 99.5 1E-13 3.5E-18 120.8 12.6 103 129-240 43-145 (253)
53 1x19_A CRTF-related protein; m 99.5 3.9E-13 1.3E-17 123.7 17.1 146 128-282 188-359 (359)
54 3gnl_A Uncharacterized protein 99.5 1.6E-13 5.5E-18 120.1 13.6 109 129-243 20-128 (244)
55 3pfg_A N-methyltransferase; N, 99.5 9.5E-14 3.3E-18 121.9 12.3 99 129-239 49-150 (263)
56 1zx0_A Guanidinoacetate N-meth 99.5 8.2E-14 2.8E-18 120.7 11.7 107 128-240 58-170 (236)
57 3hem_A Cyclopropane-fatty-acyl 99.5 1.9E-13 6.6E-18 122.6 14.5 108 126-240 68-183 (302)
58 1wzn_A SAM-dependent methyltra 99.5 2.7E-13 9.2E-18 118.0 15.0 104 128-239 39-144 (252)
59 2nxc_A L11 mtase, ribosomal pr 99.5 2.2E-13 7.6E-18 119.8 14.4 135 128-281 118-254 (254)
60 3uwp_A Histone-lysine N-methyl 99.5 4.1E-13 1.4E-17 125.3 16.8 114 122-240 165-288 (438)
61 4df3_A Fibrillarin-like rRNA/T 99.5 8.1E-14 2.8E-18 121.3 11.2 146 126-280 73-230 (233)
62 3evz_A Methyltransferase; NYSG 99.5 4.9E-13 1.7E-17 114.9 15.6 110 127-241 52-180 (230)
63 3ujc_A Phosphoethanolamine N-m 99.5 8.9E-14 3E-18 121.5 11.0 107 127-240 52-159 (266)
64 2esr_A Methyltransferase; stru 99.5 1.4E-13 4.8E-18 113.6 11.7 106 129-240 30-138 (177)
65 3vc1_A Geranyl diphosphate 2-C 99.5 1.4E-13 4.6E-18 124.3 12.5 107 128-240 115-221 (312)
66 1yzh_A TRNA (guanine-N(7)-)-me 99.5 2.3E-13 8E-18 116.0 13.3 108 129-240 40-156 (214)
67 3dxy_A TRNA (guanine-N(7)-)-me 99.5 1E-13 3.5E-18 119.5 11.1 108 129-240 33-150 (218)
68 1dus_A MJ0882; hypothetical pr 99.5 4.5E-13 1.5E-17 111.1 14.6 108 128-241 50-158 (194)
69 3hnr_A Probable methyltransfer 99.5 1.5E-13 5.2E-18 117.1 11.8 101 129-240 44-145 (220)
70 2kw5_A SLR1183 protein; struct 99.5 2.8E-13 9.7E-18 113.9 13.4 103 129-240 29-131 (202)
71 1xxl_A YCGJ protein; structura 99.5 1.4E-13 4.7E-18 119.5 11.7 107 127-240 18-124 (239)
72 1kpg_A CFA synthase;, cyclopro 99.5 1.9E-13 6.5E-18 121.5 12.9 107 127-240 61-168 (287)
73 2ift_A Putative methylase HI07 99.5 1.5E-13 5E-18 116.6 11.6 105 130-240 53-163 (201)
74 2o57_A Putative sarcosine dime 99.5 1.2E-13 4.2E-18 123.3 11.6 108 128-240 80-187 (297)
75 3cgg_A SAM-dependent methyltra 99.5 3.7E-13 1.3E-17 111.6 13.8 141 128-282 44-195 (195)
76 3lpm_A Putative methyltransfer 99.5 3.5E-13 1.2E-17 118.6 14.1 107 130-240 49-176 (259)
77 3ofk_A Nodulation protein S; N 99.5 3.4E-13 1.2E-17 114.6 13.5 103 129-240 50-154 (216)
78 3bxo_A N,N-dimethyltransferase 99.5 1.5E-13 5.3E-18 118.2 11.4 100 129-240 39-141 (239)
79 2fca_A TRNA (guanine-N(7)-)-me 99.5 2.7E-13 9.1E-18 116.1 12.7 108 129-240 37-153 (213)
80 3mgg_A Methyltransferase; NYSG 99.5 1.4E-13 4.8E-18 121.5 11.3 107 129-240 36-142 (276)
81 3g2m_A PCZA361.24; SAM-depende 99.5 1.3E-13 4.4E-18 123.6 11.2 108 128-240 80-190 (299)
82 3g07_A 7SK snRNA methylphospha 99.5 7.1E-14 2.4E-18 125.3 9.2 110 129-240 45-220 (292)
83 1l3i_A Precorrin-6Y methyltran 99.5 4.9E-13 1.7E-17 110.6 13.6 105 127-240 30-134 (192)
84 1ve3_A Hypothetical protein PH 99.5 6.9E-13 2.3E-17 113.2 14.8 105 129-240 37-142 (227)
85 2fk8_A Methoxy mycolic acid sy 99.5 4E-13 1.4E-17 121.3 13.9 107 127-240 87-194 (318)
86 2p8j_A S-adenosylmethionine-de 99.5 2.6E-13 9E-18 114.5 11.2 105 129-240 22-128 (209)
87 3adn_A Spermidine synthase; am 99.5 1.2E-13 4.1E-18 124.4 9.6 110 129-240 82-198 (294)
88 3i9f_A Putative type 11 methyl 99.5 6.3E-13 2.1E-17 108.8 13.1 137 128-281 15-159 (170)
89 2r3s_A Uncharacterized protein 99.5 3.2E-13 1.1E-17 122.6 12.4 107 129-240 164-271 (335)
90 3gwz_A MMCR; methyltransferase 99.5 1.6E-12 5.5E-17 120.3 17.3 106 129-240 201-307 (369)
91 3h2b_A SAM-dependent methyltra 99.5 2.2E-13 7.6E-18 114.7 10.5 100 130-240 41-141 (203)
92 2fhp_A Methylase, putative; al 99.5 2.3E-13 7.7E-18 112.8 10.3 106 129-240 43-154 (187)
93 3id6_C Fibrillarin-like rRNA/T 99.5 1.6E-12 5.3E-17 113.2 16.0 147 128-282 74-231 (232)
94 3lbf_A Protein-L-isoaspartate 99.5 1.7E-13 6E-18 116.1 9.4 103 127-242 74-176 (210)
95 2ex4_A Adrenal gland protein A 99.5 3.8E-13 1.3E-17 116.6 11.8 106 130-240 79-185 (241)
96 2b2c_A Spermidine synthase; be 99.5 2.2E-13 7.5E-18 123.8 10.7 110 129-240 107-222 (314)
97 3gu3_A Methyltransferase; alph 99.5 2.6E-13 8.8E-18 120.9 10.8 106 129-241 21-127 (284)
98 4hg2_A Methyltransferase type 99.5 1E-13 3.5E-18 122.5 8.1 98 129-240 38-135 (257)
99 4fsd_A Arsenic methyltransfera 99.5 2.7E-13 9.1E-18 126.2 11.1 110 129-240 82-203 (383)
100 3i53_A O-methyltransferase; CO 99.5 5.2E-13 1.8E-17 121.5 12.8 144 129-281 168-331 (332)
101 2p35_A Trans-aconitate 2-methy 99.5 3.7E-13 1.3E-17 117.3 11.3 107 123-240 26-132 (259)
102 1xj5_A Spermidine synthase 1; 99.4 3.5E-13 1.2E-17 123.5 11.5 110 129-240 119-235 (334)
103 3ggd_A SAM-dependent methyltra 99.4 8.1E-13 2.8E-17 114.6 13.1 103 129-240 55-163 (245)
104 4dzr_A Protein-(glutamine-N5) 99.4 1.1E-13 3.7E-18 116.8 7.2 107 129-240 29-165 (215)
105 3tma_A Methyltransferase; thum 99.4 2.8E-12 9.4E-17 118.0 17.2 143 128-281 201-353 (354)
106 2ozv_A Hypothetical protein AT 99.4 3.1E-13 1.1E-17 119.3 10.3 109 129-240 35-170 (260)
107 3fzg_A 16S rRNA methylase; met 99.4 9.4E-14 3.2E-18 116.9 6.5 105 129-240 48-152 (200)
108 3l8d_A Methyltransferase; stru 99.4 3.6E-13 1.2E-17 116.2 10.4 102 129-240 52-153 (242)
109 2fpo_A Methylase YHHF; structu 99.4 6.2E-13 2.1E-17 112.8 11.5 104 130-240 54-160 (202)
110 3sm3_A SAM-dependent methyltra 99.4 9E-13 3.1E-17 112.8 12.6 107 129-240 29-141 (235)
111 2yqz_A Hypothetical protein TT 99.4 4.1E-13 1.4E-17 117.1 10.6 103 129-239 38-140 (263)
112 1ri5_A MRNA capping enzyme; me 99.4 8.5E-13 2.9E-17 117.2 12.6 109 128-240 62-174 (298)
113 1nt2_A Fibrillarin-like PRE-rR 99.4 6.9E-13 2.3E-17 113.5 11.5 104 128-240 55-161 (210)
114 3bkw_A MLL3908 protein, S-aden 99.4 6.4E-13 2.2E-17 114.6 11.3 102 129-240 42-144 (243)
115 3dp7_A SAM-dependent methyltra 99.4 1.3E-12 4.5E-17 120.6 14.1 108 129-240 178-287 (363)
116 2fyt_A Protein arginine N-meth 99.4 1.3E-12 4.3E-17 119.9 13.8 104 129-237 63-168 (340)
117 2qe6_A Uncharacterized protein 99.4 1.8E-12 6.2E-17 115.4 14.4 106 129-240 76-196 (274)
118 3dmg_A Probable ribosomal RNA 99.4 7.5E-13 2.6E-17 123.3 12.3 131 129-266 232-371 (381)
119 2o07_A Spermidine synthase; st 99.4 5.7E-13 1.9E-17 120.5 11.2 110 129-240 94-209 (304)
120 1uir_A Polyamine aminopropyltr 99.4 6.7E-13 2.3E-17 120.5 11.7 149 129-281 76-241 (314)
121 2ipx_A RRNA 2'-O-methyltransfe 99.4 2E-12 7E-17 111.6 14.2 145 128-282 75-232 (233)
122 1iy9_A Spermidine synthase; ro 99.4 4E-13 1.4E-17 119.8 9.9 110 129-240 74-189 (275)
123 2p7i_A Hypothetical protein; p 99.4 4.2E-13 1.4E-17 115.6 9.8 100 129-240 41-141 (250)
124 1xtp_A LMAJ004091AAA; SGPP, st 99.4 9.3E-13 3.2E-17 114.4 12.0 106 128-240 91-197 (254)
125 1mjf_A Spermidine synthase; sp 99.4 7E-13 2.4E-17 118.5 11.4 108 129-240 74-193 (281)
126 2pt6_A Spermidine synthase; tr 99.4 6.9E-13 2.4E-17 120.8 11.3 110 129-240 115-230 (321)
127 1ws6_A Methyltransferase; stru 99.4 3.8E-13 1.3E-17 109.7 8.4 101 130-240 41-147 (171)
128 3e23_A Uncharacterized protein 99.4 9.2E-13 3.1E-17 111.7 11.1 99 129-240 42-141 (211)
129 2i7c_A Spermidine synthase; tr 99.4 7.9E-13 2.7E-17 118.3 11.1 110 129-240 77-192 (283)
130 1inl_A Spermidine synthase; be 99.4 1E-12 3.4E-17 118.4 11.7 110 129-240 89-205 (296)
131 3ckk_A TRNA (guanine-N(7)-)-me 99.4 1.3E-12 4.3E-17 113.9 11.8 109 129-240 45-168 (235)
132 2pxx_A Uncharacterized protein 99.4 1.3E-12 4.5E-17 110.3 11.5 106 129-241 41-160 (215)
133 3ou2_A SAM-dependent methyltra 99.4 1.1E-12 3.8E-17 111.1 11.1 101 129-240 45-146 (218)
134 4dcm_A Ribosomal RNA large sub 99.4 9.8E-13 3.4E-17 122.3 11.5 134 129-266 221-366 (375)
135 2ip2_A Probable phenazine-spec 99.4 1.4E-12 4.9E-17 118.5 12.3 103 132-240 169-272 (334)
136 3gdh_A Trimethylguanosine synt 99.4 7.8E-14 2.7E-18 120.9 3.5 105 129-240 77-181 (241)
137 2frn_A Hypothetical protein PH 99.4 6.4E-13 2.2E-17 118.5 9.6 103 129-241 124-226 (278)
138 1tw3_A COMT, carminomycin 4-O- 99.4 1.9E-12 6.5E-17 118.9 13.0 148 129-282 182-356 (360)
139 1u2z_A Histone-lysine N-methyl 99.4 8.6E-12 2.9E-16 117.7 17.4 112 124-240 236-359 (433)
140 2b3t_A Protein methyltransfera 99.4 2.4E-12 8.2E-17 114.2 12.9 107 129-240 108-238 (276)
141 4a6d_A Hydroxyindole O-methylt 99.4 5.1E-12 1.7E-16 116.4 15.5 145 129-282 178-346 (353)
142 1fbn_A MJ fibrillarin homologu 99.4 1.8E-12 6.3E-17 111.8 11.8 102 128-239 72-177 (230)
143 2pbf_A Protein-L-isoaspartate 99.4 6.2E-13 2.1E-17 114.1 8.7 105 128-241 78-194 (227)
144 1i1n_A Protein-L-isoaspartate 99.4 1.3E-12 4.3E-17 112.1 10.6 105 128-241 75-183 (226)
145 2vdw_A Vaccinia virus capping 99.4 1.2E-12 4.1E-17 118.2 11.0 108 130-241 48-170 (302)
146 3d2l_A SAM-dependent methyltra 99.4 2.1E-12 7E-17 111.4 12.0 102 129-239 32-136 (243)
147 3bwc_A Spermidine synthase; SA 99.4 1.7E-12 5.9E-17 117.2 11.9 110 129-240 94-210 (304)
148 1nv8_A HEMK protein; class I a 99.4 3.1E-12 1.1E-16 114.5 13.2 108 129-242 122-251 (284)
149 1i9g_A Hypothetical protein RV 99.4 2E-12 7E-17 114.3 11.9 108 127-241 96-204 (280)
150 2igt_A SAM dependent methyltra 99.4 1.9E-12 6.4E-17 118.5 11.8 107 129-240 152-272 (332)
151 3dli_A Methyltransferase; PSI- 99.4 1.5E-12 5E-17 112.8 10.6 98 129-240 40-140 (240)
152 3r0q_C Probable protein argini 99.4 2.3E-12 7.9E-17 119.7 12.5 105 129-239 62-168 (376)
153 2yxe_A Protein-L-isoaspartate 99.4 1.9E-12 6.6E-17 110.0 11.1 105 127-241 74-178 (215)
154 1p91_A Ribosomal RNA large sub 99.4 5.5E-12 1.9E-16 110.9 14.3 120 129-265 84-213 (269)
155 3thr_A Glycine N-methyltransfe 99.4 2.3E-12 7.8E-17 114.7 12.0 108 129-240 56-175 (293)
156 3ccf_A Cyclopropane-fatty-acyl 99.4 1.5E-12 5E-17 115.4 10.6 100 128-240 55-154 (279)
157 1g8a_A Fibrillarin-like PRE-rR 99.4 2.9E-12 9.9E-17 110.0 12.0 105 128-240 71-178 (227)
158 2yxd_A Probable cobalt-precorr 99.4 1.1E-11 3.6E-16 101.8 14.8 100 127-240 32-131 (183)
159 2pwy_A TRNA (adenine-N(1)-)-me 99.4 3.8E-12 1.3E-16 110.9 12.3 106 127-241 93-199 (258)
160 3q7e_A Protein arginine N-meth 99.4 2E-12 6.8E-17 119.0 10.5 105 129-238 65-171 (349)
161 2vdv_E TRNA (guanine-N(7)-)-me 99.4 4.1E-12 1.4E-16 110.8 11.9 108 129-240 48-173 (246)
162 1o54_A SAM-dependent O-methylt 99.4 3.2E-12 1.1E-16 113.3 11.5 106 127-241 109-214 (277)
163 3iv6_A Putative Zn-dependent a 99.4 9.8E-12 3.3E-16 110.0 14.3 105 127-240 42-148 (261)
164 3mcz_A O-methyltransferase; ad 99.4 4.1E-12 1.4E-16 116.3 12.3 108 129-240 177-287 (352)
165 2yvl_A TRMI protein, hypotheti 99.4 6.4E-12 2.2E-16 108.8 12.8 103 128-241 89-191 (248)
166 3bkx_A SAM-dependent methyltra 99.4 3.1E-12 1.1E-16 112.6 10.9 113 125-240 38-159 (275)
167 3ege_A Putative methyltransfer 99.4 1.2E-12 4.1E-17 115.1 8.2 99 128-240 32-130 (261)
168 2gs9_A Hypothetical protein TT 99.4 3.3E-12 1.1E-16 108.1 10.6 106 119-240 26-132 (211)
169 3cvo_A Methyltransferase-like 99.4 4E-12 1.4E-16 108.2 11.1 100 129-240 29-154 (202)
170 3p2e_A 16S rRNA methylase; met 99.4 2.2E-12 7.4E-17 111.6 9.6 107 128-238 22-137 (225)
171 1qzz_A RDMB, aclacinomycin-10- 99.4 7E-12 2.4E-16 115.6 13.5 106 129-240 181-287 (374)
172 1dl5_A Protein-L-isoaspartate 99.4 6E-12 2.1E-16 114.1 12.8 103 127-240 72-175 (317)
173 3ajd_A Putative methyltransfer 99.3 3.5E-12 1.2E-16 113.4 10.9 109 128-240 81-211 (274)
174 1vbf_A 231AA long hypothetical 99.3 3.1E-12 1E-16 109.9 10.2 100 127-241 67-166 (231)
175 1ixk_A Methyltransferase; open 99.3 5.4E-12 1.9E-16 114.5 12.3 111 127-240 115-246 (315)
176 1o9g_A RRNA methyltransferase; 99.3 1.9E-12 6.5E-17 113.1 8.8 110 129-240 50-214 (250)
177 1jg1_A PIMT;, protein-L-isoasp 99.3 2.9E-12 1E-16 110.8 9.6 103 127-241 88-190 (235)
178 2y1w_A Histone-arginine methyl 99.3 7.3E-12 2.5E-16 115.1 12.8 106 128-239 48-154 (348)
179 3a27_A TYW2, uncharacterized p 99.3 2.9E-12 1E-16 113.8 9.8 103 128-240 117-219 (272)
180 1yb2_A Hypothetical protein TA 99.3 4.1E-12 1.4E-16 112.7 10.8 104 128-241 108-212 (275)
181 2bm8_A Cephalosporin hydroxyla 99.3 1.4E-12 4.7E-17 113.6 7.4 100 129-240 80-187 (236)
182 2h00_A Methyltransferase 10 do 99.3 1.6E-12 5.6E-17 113.6 7.5 106 130-238 65-190 (254)
183 3m33_A Uncharacterized protein 99.3 6.7E-12 2.3E-16 107.9 11.0 91 129-237 47-139 (226)
184 2pjd_A Ribosomal RNA small sub 99.3 4.1E-12 1.4E-16 116.4 10.0 106 128-240 194-303 (343)
185 2b25_A Hypothetical protein; s 99.3 7.4E-12 2.5E-16 114.2 11.6 107 127-240 102-219 (336)
186 4hc4_A Protein arginine N-meth 99.3 5.4E-12 1.9E-16 117.2 10.7 104 129-238 82-187 (376)
187 2i62_A Nicotinamide N-methyltr 99.3 6.8E-12 2.3E-16 109.5 10.7 109 128-240 54-198 (265)
188 1r18_A Protein-L-isoaspartate( 99.3 1.7E-12 5.7E-17 111.7 6.4 104 128-241 82-195 (227)
189 2avn_A Ubiquinone/menaquinone 99.3 4.1E-12 1.4E-16 111.5 8.8 98 130-240 54-152 (260)
190 3mq2_A 16S rRNA methyltransfer 99.3 4.5E-12 1.5E-16 108.0 8.8 108 128-240 25-140 (218)
191 2qm3_A Predicted methyltransfe 99.3 1.6E-11 5.5E-16 113.8 13.1 104 129-239 171-277 (373)
192 4dmg_A Putative uncharacterize 99.3 4.2E-11 1.4E-15 111.9 15.6 106 129-241 213-327 (393)
193 2aot_A HMT, histamine N-methyl 99.3 5E-12 1.7E-16 112.9 9.0 108 129-240 51-172 (292)
194 1g6q_1 HnRNP arginine N-methyl 99.3 8.7E-12 3E-16 113.7 10.7 104 129-237 37-142 (328)
195 3bgv_A MRNA CAP guanine-N7 met 99.3 1.5E-11 5E-16 110.9 11.9 110 129-241 33-156 (313)
196 2cmg_A Spermidine synthase; tr 99.3 4.2E-12 1.4E-16 112.5 8.1 99 129-240 71-171 (262)
197 3k6r_A Putative transferase PH 99.3 9E-12 3.1E-16 111.2 10.3 112 118-240 114-225 (278)
198 3b3j_A Histone-arginine methyl 99.3 7.7E-12 2.6E-16 119.8 10.5 104 129-238 157-261 (480)
199 2a14_A Indolethylamine N-methy 99.3 2.7E-12 9.1E-17 113.2 6.8 110 127-240 52-197 (263)
200 2b78_A Hypothetical protein SM 99.3 2.1E-11 7.2E-16 113.6 12.6 108 129-240 211-331 (385)
201 1af7_A Chemotaxis receptor met 99.3 1.1E-11 3.6E-16 110.6 10.0 111 130-242 105-254 (274)
202 2as0_A Hypothetical protein PH 99.3 3.1E-11 1.1E-15 112.7 12.8 108 129-240 216-335 (396)
203 3htx_A HEN1; HEN1, small RNA m 99.3 3.8E-11 1.3E-15 120.0 13.9 108 129-240 720-834 (950)
204 2qfm_A Spermine synthase; sper 99.3 2.3E-11 8E-16 111.8 11.3 110 129-241 187-315 (364)
205 3v97_A Ribosomal RNA large sub 99.3 3E-11 1E-15 120.7 12.7 108 129-240 538-657 (703)
206 2yx1_A Hypothetical protein MJ 99.2 2E-11 7E-16 111.7 10.3 98 129-240 194-291 (336)
207 3m4x_A NOL1/NOP2/SUN family pr 99.2 3.5E-11 1.2E-15 114.4 11.6 110 128-240 103-234 (456)
208 2g72_A Phenylethanolamine N-me 99.2 9.7E-12 3.3E-16 110.7 7.2 109 129-240 70-215 (289)
209 3bzb_A Uncharacterized protein 99.2 4E-11 1.4E-15 106.9 11.2 107 129-240 78-205 (281)
210 1wy7_A Hypothetical protein PH 99.2 3.8E-10 1.3E-14 95.1 16.5 101 128-239 47-148 (207)
211 3m6w_A RRNA methylase; rRNA me 99.2 3.2E-11 1.1E-15 114.9 10.7 109 128-240 99-229 (464)
212 3sso_A Methyltransferase; macr 99.2 3.8E-11 1.3E-15 111.8 10.9 99 129-240 215-324 (419)
213 3c0k_A UPF0064 protein YCCW; P 99.2 5.4E-11 1.9E-15 111.1 12.0 108 129-240 219-339 (396)
214 3lst_A CALO1 methyltransferase 99.2 4.5E-11 1.5E-15 109.5 10.9 103 129-240 183-286 (348)
215 3o4f_A Spermidine synthase; am 99.2 5E-11 1.7E-15 106.9 10.8 110 129-240 82-198 (294)
216 3cc8_A Putative methyltransfer 99.2 4.3E-11 1.5E-15 101.8 9.9 98 129-240 31-130 (230)
217 3tm4_A TRNA (guanine N2-)-meth 99.2 1E-10 3.5E-15 108.4 13.1 108 128-239 215-329 (373)
218 1wxx_A TT1595, hypothetical pr 99.2 5.3E-11 1.8E-15 110.7 10.9 105 130-240 209-325 (382)
219 3axs_A Probable N(2),N(2)-dime 99.2 5.4E-11 1.9E-15 111.0 10.9 104 129-240 51-158 (392)
220 2frx_A Hypothetical protein YE 99.2 7.8E-11 2.7E-15 112.8 12.2 108 130-240 117-246 (479)
221 3giw_A Protein of unknown func 99.2 1.1E-10 3.7E-15 103.8 12.2 108 130-240 78-200 (277)
222 2dul_A N(2),N(2)-dimethylguano 99.2 8.4E-11 2.9E-15 109.3 11.7 103 130-240 47-164 (378)
223 1vlm_A SAM-dependent methyltra 99.2 5.2E-11 1.8E-15 101.6 9.3 93 130-240 47-139 (219)
224 3q87_B N6 adenine specific DNA 99.2 4.3E-11 1.5E-15 98.6 8.1 94 129-240 22-123 (170)
225 1ej0_A FTSJ; methyltransferase 99.2 6.2E-11 2.1E-15 96.2 8.4 99 128-240 20-136 (180)
226 3bt7_A TRNA (uracil-5-)-methyl 99.2 1.1E-10 3.8E-15 108.0 10.7 100 129-241 212-327 (369)
227 2yxl_A PH0851 protein, 450AA l 99.2 1.2E-10 4E-15 110.7 10.7 109 128-240 257-389 (450)
228 1ne2_A Hypothetical protein TA 99.1 7.6E-10 2.6E-14 92.9 14.0 98 128-240 49-147 (200)
229 2jjq_A Uncharacterized RNA met 99.1 6.5E-10 2.2E-14 104.9 14.9 99 128-240 288-387 (425)
230 1zq9_A Probable dimethyladenos 99.1 1.4E-10 4.8E-15 103.7 9.9 104 127-237 25-144 (285)
231 1sqg_A SUN protein, FMU protei 99.1 2.3E-10 8E-15 107.9 11.3 108 128-240 244-374 (429)
232 4e2x_A TCAB9; kijanose, tetron 99.1 4.5E-11 1.5E-15 111.9 6.2 104 127-240 104-208 (416)
233 4azs_A Methyltransferase WBDD; 99.1 1.3E-10 4.6E-15 113.4 8.6 106 129-240 65-173 (569)
234 1fp2_A Isoflavone O-methyltran 99.1 2.2E-10 7.7E-15 105.0 9.5 98 129-240 187-288 (352)
235 3reo_A (ISO)eugenol O-methyltr 99.1 2.3E-10 7.7E-15 105.8 9.5 98 129-240 202-300 (368)
236 3frh_A 16S rRNA methylase; met 99.1 6.8E-10 2.3E-14 96.6 11.8 102 129-240 104-206 (253)
237 3p9c_A Caffeic acid O-methyltr 99.1 4.2E-10 1.4E-14 103.9 10.6 98 129-240 200-298 (364)
238 2plw_A Ribosomal RNA methyltra 99.1 5.1E-10 1.8E-14 93.7 10.0 97 129-240 21-154 (201)
239 3dou_A Ribosomal RNA large sub 99.1 3.1E-10 1E-14 95.6 8.6 124 129-275 24-171 (191)
240 2b9e_A NOL1/NOP2/SUN domain fa 99.1 2.1E-09 7.3E-14 97.2 14.5 110 127-240 99-234 (309)
241 1fp1_D Isoliquiritigenin 2'-O- 99.1 2.6E-10 8.9E-15 105.4 8.6 98 129-240 208-306 (372)
242 3lcv_B Sisomicin-gentamicin re 99.1 1.5E-10 5.1E-15 101.8 6.3 105 129-240 131-236 (281)
243 1uwv_A 23S rRNA (uracil-5-)-me 99.1 2E-09 6.9E-14 101.7 14.5 102 128-240 284-389 (433)
244 2h1r_A Dimethyladenosine trans 99.0 6.6E-10 2.2E-14 100.0 10.3 80 127-214 39-118 (299)
245 2zfu_A Nucleomethylin, cerebra 99.0 3.9E-10 1.3E-14 95.6 7.6 120 129-282 66-191 (215)
246 3k0b_A Predicted N6-adenine-sp 99.0 2.7E-09 9.3E-14 99.6 13.3 111 128-241 199-351 (393)
247 2f8l_A Hypothetical protein LM 99.0 6.3E-10 2.1E-14 101.9 8.1 109 129-243 129-259 (344)
248 3ll7_A Putative methyltransfer 99.0 9.8E-10 3.4E-14 102.9 9.6 78 129-212 92-173 (410)
249 3hp7_A Hemolysin, putative; st 99.0 7.3E-10 2.5E-14 99.3 8.0 103 123-239 77-184 (291)
250 3ldg_A Putative uncharacterize 99.0 4.9E-09 1.7E-13 97.6 13.7 111 128-241 192-344 (384)
251 3ldu_A Putative methylase; str 99.0 3.5E-09 1.2E-13 98.6 12.3 110 129-241 194-345 (385)
252 3gru_A Dimethyladenosine trans 99.0 2.7E-09 9.3E-14 95.9 11.1 81 126-214 46-126 (295)
253 1zg3_A Isoflavanone 4'-O-methy 99.0 1.4E-09 4.7E-14 100.0 9.0 98 129-240 192-293 (358)
254 2nyu_A Putative ribosomal RNA 98.9 2.5E-09 8.7E-14 89.0 9.2 98 129-241 21-146 (196)
255 2wk1_A NOVP; transferase, O-me 98.9 3.6E-09 1.2E-13 94.4 10.1 108 129-241 105-245 (282)
256 2qy6_A UPF0209 protein YFCK; s 98.9 1.7E-09 5.7E-14 95.4 7.6 129 129-265 59-232 (257)
257 3c6k_A Spermine synthase; sper 98.9 6.1E-09 2.1E-13 96.2 11.7 109 129-240 204-331 (381)
258 3opn_A Putative hemolysin; str 98.9 8.5E-10 2.9E-14 95.8 5.2 105 123-239 29-136 (232)
259 2r6z_A UPF0341 protein in RSP 98.9 1.6E-09 5.3E-14 95.7 6.7 79 129-212 82-171 (258)
260 2ld4_A Anamorsin; methyltransf 98.9 7.1E-10 2.4E-14 91.2 3.9 91 126-240 8-101 (176)
261 1m6y_A S-adenosyl-methyltransf 98.9 6E-09 2.1E-13 93.9 10.3 81 127-212 23-108 (301)
262 2wa2_A Non-structural protein 98.9 6.3E-10 2.2E-14 99.1 3.6 105 128-240 80-193 (276)
263 3fut_A Dimethyladenosine trans 98.9 1.6E-08 5.4E-13 89.9 12.4 80 126-215 43-123 (271)
264 2oxt_A Nucleoside-2'-O-methylt 98.9 6.2E-10 2.1E-14 98.6 3.1 106 127-240 71-185 (265)
265 4fzv_A Putative methyltransfer 98.9 1.5E-08 5E-13 93.4 11.5 112 127-240 145-284 (359)
266 2ih2_A Modification methylase 98.8 5.1E-09 1.7E-13 97.8 8.4 100 129-241 38-165 (421)
267 1qam_A ERMC' methyltransferase 98.8 2.1E-08 7.2E-13 87.4 11.7 94 128-234 28-122 (244)
268 2oyr_A UPF0341 protein YHIQ; a 98.8 2.9E-09 9.8E-14 94.0 5.8 81 129-213 85-175 (258)
269 3tqs_A Ribosomal RNA small sub 98.8 1.5E-08 5.2E-13 89.2 10.2 78 126-212 25-106 (255)
270 2p41_A Type II methyltransfera 98.8 5.3E-09 1.8E-13 94.4 6.1 102 128-240 80-191 (305)
271 2xyq_A Putative 2'-O-methyl tr 98.8 1.8E-08 6.3E-13 90.2 9.3 93 128-240 61-171 (290)
272 1yub_A Ermam, rRNA methyltrans 98.8 3.9E-10 1.3E-14 98.3 -2.1 103 127-238 26-143 (245)
273 2okc_A Type I restriction enzy 98.7 1.2E-08 4E-13 96.7 7.2 111 129-242 170-309 (445)
274 3v97_A Ribosomal RNA large sub 98.7 1E-07 3.4E-12 95.3 12.5 112 128-241 188-348 (703)
275 4gqb_A Protein arginine N-meth 98.6 1.3E-07 4.3E-12 93.0 10.0 102 131-237 358-464 (637)
276 3ftd_A Dimethyladenosine trans 98.6 2.1E-07 7.3E-12 81.4 10.4 102 126-240 27-131 (249)
277 1qyr_A KSGA, high level kasuga 98.6 1.5E-07 5.1E-12 82.6 8.6 80 127-214 18-102 (252)
278 3uzu_A Ribosomal RNA small sub 98.5 2.7E-07 9.3E-12 82.2 9.2 93 126-229 38-137 (279)
279 2ar0_A M.ecoki, type I restric 98.5 4.1E-07 1.4E-11 88.2 10.3 114 128-243 167-315 (541)
280 3m6i_A L-arabinitol 4-dehydrog 98.4 1.6E-06 5.5E-11 79.4 11.6 121 104-240 149-283 (363)
281 3ua3_A Protein arginine N-meth 98.4 9.5E-07 3.3E-11 87.1 10.2 104 131-237 410-531 (745)
282 3s2e_A Zinc-containing alcohol 98.4 6E-07 2E-11 81.6 8.2 105 122-240 158-263 (340)
283 1pl8_A Human sorbitol dehydrog 98.4 1.4E-06 4.7E-11 79.8 10.0 122 105-240 141-273 (356)
284 3fpc_A NADP-dependent alcohol 98.3 3.8E-07 1.3E-11 83.4 5.6 106 122-241 158-267 (352)
285 4ej6_A Putative zinc-binding d 98.3 8.8E-07 3E-11 81.6 8.1 104 123-240 175-284 (370)
286 4eez_A Alcohol dehydrogenase 1 98.3 2E-06 6.9E-11 78.1 10.3 123 105-240 132-263 (348)
287 3khk_A Type I restriction-modi 98.3 6.3E-07 2.2E-11 86.9 6.9 111 131-243 245-398 (544)
288 4a2c_A Galactitol-1-phosphate 98.3 2.5E-06 8.4E-11 77.4 10.4 124 104-240 129-260 (346)
289 3lkd_A Type I restriction-modi 98.3 1.5E-06 5E-11 84.3 8.8 113 129-243 220-361 (542)
290 3jv7_A ADH-A; dehydrogenase, n 98.3 1.6E-06 5.5E-11 78.8 8.3 107 121-241 160-271 (345)
291 2h6e_A ADH-4, D-arabinose 1-de 98.3 1.3E-06 4.3E-11 79.6 7.5 101 127-240 168-269 (344)
292 3s1s_A Restriction endonucleas 98.3 2.1E-06 7.3E-11 85.9 9.4 112 129-243 320-468 (878)
293 1f8f_A Benzyl alcohol dehydrog 98.3 1.1E-06 3.9E-11 80.7 7.0 100 127-240 187-289 (371)
294 1e3j_A NADP(H)-dependent ketos 98.2 6.7E-06 2.3E-10 75.0 10.7 101 126-240 164-271 (352)
295 1rjw_A ADH-HT, alcohol dehydro 98.2 3.3E-06 1.1E-10 76.7 7.5 105 122-240 156-261 (339)
296 1wg8_A Predicted S-adenosylmet 98.1 9.1E-06 3.1E-10 72.0 9.6 77 126-212 18-99 (285)
297 3uko_A Alcohol dehydrogenase c 98.1 1.8E-06 6.1E-11 79.7 5.3 100 127-240 190-295 (378)
298 1uuf_A YAHK, zinc-type alcohol 98.1 1.8E-06 6E-11 79.6 5.0 102 122-240 186-288 (369)
299 4dvj_A Putative zinc-dependent 98.1 3.4E-06 1.2E-10 77.5 6.8 97 130-240 171-270 (363)
300 3two_A Mannitol dehydrogenase; 98.1 3.5E-06 1.2E-10 76.7 6.6 100 121-241 167-266 (348)
301 1vj0_A Alcohol dehydrogenase, 98.1 2.5E-06 8.5E-11 78.8 5.4 105 123-241 187-299 (380)
302 3tos_A CALS11; methyltransfera 98.1 0.00017 5.7E-09 63.2 16.5 140 98-241 36-218 (257)
303 2k4m_A TR8_protein, UPF0146 pr 98.1 1.3E-06 4.6E-11 69.9 2.9 86 129-240 34-121 (153)
304 1kol_A Formaldehyde dehydrogen 98.1 4.8E-06 1.6E-10 77.2 7.1 110 123-240 178-300 (398)
305 1e3i_A Alcohol dehydrogenase, 98.1 4.5E-06 1.5E-10 76.8 6.8 99 128-240 193-297 (376)
306 1p0f_A NADP-dependent alcohol 98.1 3.9E-06 1.4E-10 77.1 6.2 99 128-240 189-293 (373)
307 2dph_A Formaldehyde dismutase; 98.1 1.8E-06 6.1E-11 80.2 3.8 110 123-240 178-299 (398)
308 2d8a_A PH0655, probable L-thre 98.0 5.1E-06 1.8E-10 75.6 6.4 98 130-241 167-268 (348)
309 1cdo_A Alcohol dehydrogenase; 98.0 5.3E-06 1.8E-10 76.3 6.3 99 128-240 190-294 (374)
310 3ip1_A Alcohol dehydrogenase, 98.0 6.9E-06 2.4E-10 76.4 6.4 101 128-241 211-319 (404)
311 2fzw_A Alcohol dehydrogenase c 98.0 6.3E-06 2.2E-10 75.7 6.0 99 128-240 188-292 (373)
312 2jhf_A Alcohol dehydrogenase E 98.0 6.9E-06 2.4E-10 75.5 6.2 99 128-240 189-293 (374)
313 3uog_A Alcohol dehydrogenase; 98.0 5.5E-06 1.9E-10 76.0 5.2 98 128-241 187-288 (363)
314 3jyn_A Quinone oxidoreductase; 97.9 8.4E-06 2.9E-10 73.5 5.8 98 128-240 138-239 (325)
315 2b5w_A Glucose dehydrogenase; 97.9 6.3E-06 2.2E-10 75.4 4.8 98 128-241 164-274 (357)
316 4auk_A Ribosomal RNA large sub 97.9 5.2E-05 1.8E-09 69.7 10.7 94 129-237 210-303 (375)
317 4b7c_A Probable oxidoreductase 97.9 1.2E-05 4E-10 72.8 6.0 100 127-241 146-249 (336)
318 3fbg_A Putative arginate lyase 97.9 1.2E-05 4.2E-10 73.1 6.0 96 130-240 150-248 (346)
319 2dq4_A L-threonine 3-dehydroge 97.9 4.9E-06 1.7E-10 75.6 3.3 100 126-241 161-263 (343)
320 2cf5_A Atccad5, CAD, cinnamyl 97.9 9.8E-06 3.3E-10 74.1 5.1 103 123-240 172-275 (357)
321 1piw_A Hypothetical zinc-type 97.9 8.5E-06 2.9E-10 74.6 4.4 105 122-240 171-276 (360)
322 2c0c_A Zinc binding alcohol de 97.9 2.6E-05 8.9E-10 71.4 7.4 99 128-241 161-262 (362)
323 3qwb_A Probable quinone oxidor 97.8 1.1E-05 3.7E-10 73.0 4.8 98 128-240 146-247 (334)
324 3evf_A RNA-directed RNA polyme 97.8 1.4E-05 4.9E-10 70.4 5.0 111 126-242 70-186 (277)
325 3tqh_A Quinone oxidoreductase; 97.8 6.5E-05 2.2E-09 67.5 9.5 101 122-240 144-245 (321)
326 1yqd_A Sinapyl alcohol dehydro 97.8 2.6E-05 9E-10 71.5 6.7 104 122-240 178-282 (366)
327 3nx4_A Putative oxidoreductase 97.8 6.9E-05 2.4E-09 67.2 9.3 90 133-240 149-241 (324)
328 1pqw_A Polyketide synthase; ro 97.8 1.8E-05 6E-10 65.9 4.9 99 128-241 36-138 (198)
329 2hcy_A Alcohol dehydrogenase 1 97.8 2.5E-05 8.5E-10 71.0 6.1 105 122-240 161-269 (347)
330 1jvb_A NAD(H)-dependent alcoho 97.8 2.2E-05 7.5E-10 71.4 5.7 106 122-240 162-271 (347)
331 3gaz_A Alcohol dehydrogenase s 97.8 3.4E-05 1.2E-09 70.1 6.8 95 128-240 148-246 (343)
332 1h2b_A Alcohol dehydrogenase; 97.8 2.7E-05 9.1E-10 71.3 6.1 99 126-240 182-285 (359)
333 3gqv_A Enoyl reductase; medium 97.8 2.9E-05 1E-09 71.4 6.2 97 129-240 163-263 (371)
334 4eye_A Probable oxidoreductase 97.8 2.1E-05 7.3E-10 71.4 5.2 97 128-240 157-257 (342)
335 3gms_A Putative NADPH:quinone 97.8 1.7E-05 5.7E-10 72.0 4.3 98 128-240 142-243 (340)
336 4dup_A Quinone oxidoreductase; 97.8 2.3E-05 8E-10 71.5 5.3 98 128-240 165-265 (353)
337 2vn8_A Reticulon-4-interacting 97.7 2.8E-05 9.5E-10 71.5 5.7 99 128-240 181-280 (375)
338 3goh_A Alcohol dehydrogenase, 97.7 2.8E-05 9.6E-10 69.6 5.6 91 127-240 139-229 (315)
339 1xa0_A Putative NADPH dependen 97.7 3.6E-05 1.2E-09 69.2 5.7 97 128-240 146-246 (328)
340 3gcz_A Polyprotein; flavivirus 97.7 1.5E-05 5.1E-10 70.4 2.8 110 125-242 85-203 (282)
341 3tka_A Ribosomal RNA small sub 97.7 0.00011 3.8E-09 66.6 8.2 82 124-212 51-138 (347)
342 3krt_A Crotonyl COA reductase; 97.6 3.7E-05 1.3E-09 72.7 5.1 98 128-240 226-344 (456)
343 3vyw_A MNMC2; tRNA wobble urid 97.6 0.00045 1.5E-08 61.9 11.7 132 129-268 95-248 (308)
344 1tt7_A YHFP; alcohol dehydroge 97.6 4.5E-05 1.5E-09 68.7 5.2 96 128-240 147-247 (330)
345 1v3u_A Leukotriene B4 12- hydr 97.6 7.3E-05 2.5E-09 67.4 6.5 98 128-240 143-244 (333)
346 2eih_A Alcohol dehydrogenase; 97.6 6.5E-05 2.2E-09 68.1 6.0 98 128-240 164-265 (343)
347 1iz0_A Quinone oxidoreductase; 97.6 9.6E-05 3.3E-09 65.7 6.8 94 128-240 123-218 (302)
348 1yb5_A Quinone oxidoreductase; 97.6 9.1E-05 3.1E-09 67.5 6.4 98 128-240 168-269 (351)
349 2j8z_A Quinone oxidoreductase; 97.6 7.1E-05 2.4E-09 68.3 5.4 98 128-240 160-261 (354)
350 1wly_A CAAR, 2-haloacrylate re 97.5 0.00013 4.3E-09 65.9 7.0 98 128-240 143-244 (333)
351 4a0s_A Octenoyl-COA reductase/ 97.5 0.0001 3.6E-09 69.2 6.5 98 128-240 218-336 (447)
352 2j3h_A NADP-dependent oxidored 97.5 8.8E-05 3E-09 67.1 5.5 99 128-240 153-255 (345)
353 2vhw_A Alanine dehydrogenase; 97.5 6.8E-05 2.3E-09 69.3 4.7 103 129-240 166-268 (377)
354 2cdc_A Glucose dehydrogenase g 97.5 6.9E-05 2.3E-09 68.6 4.5 92 131-240 181-278 (366)
355 1qor_A Quinone oxidoreductase; 97.5 7.7E-05 2.6E-09 67.1 4.6 98 128-240 138-239 (327)
356 3pi7_A NADH oxidoreductase; gr 97.5 6.9E-05 2.4E-09 68.1 4.3 97 129-240 162-263 (349)
357 2zb4_A Prostaglandin reductase 97.5 0.00015 5.2E-09 65.9 6.3 100 127-240 155-260 (357)
358 1pjc_A Protein (L-alanine dehy 97.4 0.00018 6E-09 66.1 6.7 102 130-240 166-267 (361)
359 1gu7_A Enoyl-[acyl-carrier-pro 97.4 9.5E-05 3.2E-09 67.5 4.6 98 128-240 164-275 (364)
360 2zig_A TTHA0409, putative modi 97.4 0.00051 1.7E-08 61.2 9.0 47 129-179 234-280 (297)
361 3fwz_A Inner membrane protein 97.4 0.00084 2.9E-08 52.7 9.4 95 131-240 7-105 (140)
362 2eez_A Alanine dehydrogenase; 97.4 0.00037 1.3E-08 64.0 8.0 103 129-240 164-266 (369)
363 4a27_A Synaptic vesicle membra 97.4 0.00014 4.8E-09 66.1 4.7 96 128-240 140-238 (349)
364 3p8z_A Mtase, non-structural p 97.4 0.002 6.8E-08 55.5 11.4 109 124-240 72-186 (267)
365 3c85_A Putative glutathione-re 97.3 0.0012 4.2E-08 54.0 9.4 96 130-240 38-139 (183)
366 2oo3_A Protein involved in cat 97.2 0.00033 1.1E-08 62.1 5.7 99 131-238 92-196 (283)
367 3ufb_A Type I restriction-modi 97.2 0.0013 4.5E-08 63.4 10.1 113 128-243 215-365 (530)
368 3ado_A Lambda-crystallin; L-gu 97.2 0.0033 1.1E-07 56.7 12.1 102 130-240 5-123 (319)
369 3p2y_A Alanine dehydrogenase/p 97.2 0.00022 7.4E-09 66.0 3.9 109 129-240 182-302 (381)
370 4dio_A NAD(P) transhydrogenase 97.2 0.00021 7.2E-09 66.5 3.7 110 129-241 188-313 (405)
371 2dpo_A L-gulonate 3-dehydrogen 97.1 0.0047 1.6E-07 55.6 12.3 99 132-239 7-122 (319)
372 1zsy_A Mitochondrial 2-enoyl t 97.1 0.0018 6.3E-08 58.8 9.7 96 128-240 165-270 (357)
373 3pvc_A TRNA 5-methylaminomethy 97.1 0.00036 1.2E-08 69.2 5.2 111 130-241 58-212 (689)
374 3lkz_A Non-structural protein 97.1 0.0015 5.1E-08 58.0 8.4 109 125-240 89-204 (321)
375 3ce6_A Adenosylhomocysteinase; 97.1 0.00054 1.9E-08 65.4 5.9 90 128-240 271-361 (494)
376 3eld_A Methyltransferase; flav 97.1 0.00051 1.7E-08 61.0 5.2 109 127-242 78-193 (300)
377 2px2_A Genome polyprotein [con 97.1 0.0032 1.1E-07 54.9 9.9 108 126-243 69-186 (269)
378 1lss_A TRK system potassium up 97.1 0.0076 2.6E-07 46.2 11.3 95 131-240 4-102 (140)
379 3iup_A Putative NADPH:quinone 97.0 0.00014 4.9E-09 66.9 1.2 77 129-212 169-250 (379)
380 2g1u_A Hypothetical protein TM 97.0 0.0013 4.6E-08 52.4 6.6 98 129-240 17-118 (155)
381 2efj_A 3,7-dimethylxanthine me 97.0 0.0031 1.1E-07 58.3 9.7 105 131-240 53-225 (384)
382 1f0y_A HCDH, L-3-hydroxyacyl-C 96.9 0.0084 2.9E-07 53.1 11.9 98 132-238 16-134 (302)
383 4e12_A Diketoreductase; oxidor 96.9 0.0031 1.1E-07 55.5 9.0 99 132-239 5-120 (283)
384 1x13_A NAD(P) transhydrogenase 96.9 0.00043 1.5E-08 64.5 3.1 98 129-240 170-292 (401)
385 2uyo_A Hypothetical protein ML 96.8 0.0098 3.3E-07 53.3 11.5 108 129-240 101-218 (310)
386 3b5i_A S-adenosyl-L-methionine 96.8 0.0025 8.5E-08 58.8 7.7 109 131-240 53-225 (374)
387 1l7d_A Nicotinamide nucleotide 96.8 0.00074 2.5E-08 62.4 4.2 101 129-240 170-294 (384)
388 3llv_A Exopolyphosphatase-rela 96.8 0.0084 2.9E-07 46.6 9.7 94 131-240 6-103 (141)
389 1id1_A Putative potassium chan 96.8 0.0095 3.2E-07 47.1 10.1 98 131-240 3-105 (153)
390 3r24_A NSP16, 2'-O-methyl tran 96.8 0.0096 3.3E-07 52.9 10.4 99 129-244 108-221 (344)
391 3ggo_A Prephenate dehydrogenas 96.7 0.0057 2E-07 54.9 9.2 92 131-239 33-127 (314)
392 1i4w_A Mitochondrial replicati 96.6 0.0042 1.4E-07 56.8 7.6 60 130-196 58-117 (353)
393 1zcj_A Peroxisomal bifunctiona 96.6 0.02 6.8E-07 54.1 12.4 98 131-238 37-148 (463)
394 3slk_A Polyketide synthase ext 96.6 0.00076 2.6E-08 68.1 2.7 95 129-240 344-442 (795)
395 3l9w_A Glutathione-regulated p 96.6 0.007 2.4E-07 56.5 9.1 96 130-240 3-102 (413)
396 1ldn_A L-lactate dehydrogenase 96.6 0.031 1.1E-06 50.0 13.1 106 130-240 5-123 (316)
397 1g60_A Adenine-specific methyl 96.6 0.0052 1.8E-07 53.5 7.6 47 128-178 210-256 (260)
398 1m6e_X S-adenosyl-L-methionnin 96.5 0.0024 8.4E-08 58.5 5.4 108 131-240 52-209 (359)
399 2vz8_A Fatty acid synthase; tr 96.5 0.0037 1.3E-07 70.4 7.8 102 128-240 1665-1770(2512)
400 3gg2_A Sugar dehydrogenase, UD 96.5 0.016 5.3E-07 54.7 10.8 102 132-240 3-122 (450)
401 3l4b_C TRKA K+ channel protien 96.5 0.015 5.1E-07 48.8 9.7 95 132-240 1-99 (218)
402 4fs3_A Enoyl-[acyl-carrier-pro 96.4 0.027 9.3E-07 48.6 11.0 105 130-240 5-146 (256)
403 3ps9_A TRNA 5-methylaminomethy 96.4 0.017 5.7E-07 57.0 10.7 110 131-241 67-220 (676)
404 3mog_A Probable 3-hydroxybutyr 96.4 0.02 6.7E-07 54.5 10.7 99 132-240 6-120 (483)
405 2ew2_A 2-dehydropantoate 2-red 96.3 0.034 1.2E-06 48.8 11.6 100 132-240 4-108 (316)
406 2g5c_A Prephenate dehydrogenas 96.3 0.017 5.8E-07 50.3 9.4 90 132-239 2-95 (281)
407 3k6j_A Protein F01G10.3, confi 96.3 0.042 1.4E-06 51.9 12.6 100 131-240 54-166 (460)
408 3gvp_A Adenosylhomocysteinase 96.3 0.0078 2.7E-07 56.3 7.3 89 129-240 218-307 (435)
409 3oig_A Enoyl-[acyl-carrier-pro 96.3 0.044 1.5E-06 47.1 11.6 106 130-240 6-147 (266)
410 3d4o_A Dipicolinate synthase s 96.2 0.017 5.9E-07 51.0 9.1 91 129-240 153-244 (293)
411 2y0c_A BCEC, UDP-glucose dehyd 96.2 0.019 6.6E-07 54.5 9.7 105 129-240 6-128 (478)
412 3d0o_A L-LDH 1, L-lactate dehy 96.2 0.071 2.4E-06 47.7 13.0 106 130-240 5-123 (317)
413 2f1k_A Prephenate dehydrogenas 96.2 0.026 9E-07 49.0 9.8 88 133-239 2-90 (279)
414 1zej_A HBD-9, 3-hydroxyacyl-CO 96.2 0.028 9.6E-07 49.9 9.9 98 129-240 10-107 (293)
415 2rir_A Dipicolinate synthase, 96.1 0.023 8E-07 50.3 9.2 91 129-240 155-246 (300)
416 3oj0_A Glutr, glutamyl-tRNA re 96.0 0.0052 1.8E-07 48.2 4.1 90 130-239 20-109 (144)
417 3pxx_A Carveol dehydrogenase; 96.0 0.12 3.9E-06 44.8 13.1 104 130-240 9-153 (287)
418 2v6b_A L-LDH, L-lactate dehydr 96.0 0.055 1.9E-06 48.1 11.1 101 132-240 1-116 (304)
419 3ic5_A Putative saccharopine d 95.9 0.029 9.9E-07 41.5 7.8 72 130-212 4-79 (118)
420 3g79_A NDP-N-acetyl-D-galactos 95.9 0.032 1.1E-06 53.0 9.7 105 129-240 16-147 (478)
421 2xxj_A L-LDH, L-lactate dehydr 95.9 0.12 4.1E-06 46.1 13.1 103 132-240 1-116 (310)
422 1ez4_A Lactate dehydrogenase; 95.9 0.11 3.7E-06 46.6 12.8 105 130-240 4-121 (318)
423 3n58_A Adenosylhomocysteinase; 95.9 0.019 6.6E-07 53.9 8.0 89 129-240 245-334 (464)
424 3pid_A UDP-glucose 6-dehydroge 95.9 0.033 1.1E-06 52.2 9.6 100 130-240 35-153 (432)
425 3k96_A Glycerol-3-phosphate de 95.9 0.06 2.1E-06 49.0 11.1 97 131-238 29-131 (356)
426 3pqe_A L-LDH, L-lactate dehydr 95.9 0.13 4.4E-06 46.3 13.0 106 129-240 3-122 (326)
427 4e21_A 6-phosphogluconate dehy 95.8 0.025 8.7E-07 51.6 8.3 93 131-240 22-115 (358)
428 3zwc_A Peroxisomal bifunctiona 95.8 0.081 2.8E-06 52.9 12.5 100 132-240 317-429 (742)
429 3hwr_A 2-dehydropantoate 2-red 95.8 0.046 1.6E-06 48.8 9.8 97 130-239 18-119 (318)
430 4gwg_A 6-phosphogluconate dehy 95.8 0.041 1.4E-06 52.4 9.9 98 132-240 5-103 (484)
431 2zqz_A L-LDH, L-lactate dehydr 95.8 0.11 3.9E-06 46.6 12.4 107 129-240 7-125 (326)
432 3g0o_A 3-hydroxyisobutyrate de 95.8 0.028 9.5E-07 49.8 8.3 92 131-240 7-102 (303)
433 1mv8_A GMD, GDP-mannose 6-dehy 95.8 0.05 1.7E-06 50.8 10.4 102 132-240 1-123 (436)
434 1wma_A Carbonyl reductase [NAD 95.8 0.093 3.2E-06 44.7 11.4 107 130-241 3-139 (276)
435 4a7p_A UDP-glucose dehydrogena 95.8 0.027 9.2E-07 53.0 8.5 104 130-240 7-129 (446)
436 3ojo_A CAP5O; rossmann fold, c 95.8 0.055 1.9E-06 50.7 10.6 101 129-240 9-129 (431)
437 3b1f_A Putative prephenate deh 95.8 0.047 1.6E-06 47.7 9.6 91 132-238 7-99 (290)
438 1y6j_A L-lactate dehydrogenase 95.8 0.036 1.2E-06 49.7 9.0 105 130-240 6-123 (318)
439 3dfz_A SIRC, precorrin-2 dehyd 95.7 0.021 7.3E-07 48.7 6.9 105 129-252 29-134 (223)
440 1lld_A L-lactate dehydrogenase 95.7 0.12 4E-06 45.8 12.1 101 130-239 6-123 (319)
441 3lk7_A UDP-N-acetylmuramoylala 95.7 0.052 1.8E-06 50.9 10.1 74 130-213 8-83 (451)
442 3ijr_A Oxidoreductase, short c 95.6 0.18 6.2E-06 44.1 12.8 104 130-240 46-182 (291)
443 2aef_A Calcium-gated potassium 95.6 0.051 1.7E-06 45.9 8.8 94 130-240 8-105 (234)
444 3grk_A Enoyl-(acyl-carrier-pro 95.6 0.3 1E-05 42.7 14.0 105 129-240 29-169 (293)
445 3k31_A Enoyl-(acyl-carrier-pro 95.5 0.18 6E-06 44.3 12.5 105 130-241 29-169 (296)
446 1bg6_A N-(1-D-carboxylethyl)-L 95.5 0.047 1.6E-06 49.0 8.8 98 132-239 5-108 (359)
447 2hmt_A YUAA protein; RCK, KTN, 95.5 0.027 9.1E-07 43.2 6.3 95 131-240 6-104 (144)
448 2cvz_A Dehydrogenase, 3-hydrox 95.5 0.068 2.3E-06 46.4 9.6 89 132-240 2-90 (289)
449 2py6_A Methyltransferase FKBM; 95.5 0.03 1E-06 52.0 7.6 62 129-191 225-289 (409)
450 3qiv_A Short-chain dehydrogena 95.5 0.17 6E-06 42.8 12.0 76 130-212 8-96 (253)
451 3hn2_A 2-dehydropantoate 2-red 95.5 0.024 8.1E-07 50.5 6.6 94 132-238 3-101 (312)
452 1pzg_A LDH, lactate dehydrogen 95.5 0.026 9E-07 50.9 6.9 103 129-240 7-132 (331)
453 2h78_A Hibadh, 3-hydroxyisobut 95.5 0.085 2.9E-06 46.3 10.2 90 132-240 4-97 (302)
454 1a5z_A L-lactate dehydrogenase 95.5 0.11 3.6E-06 46.5 10.9 99 132-239 1-115 (319)
455 1oju_A MDH, malate dehydrogena 95.4 0.22 7.4E-06 44.2 12.4 103 132-240 1-118 (294)
456 3c24_A Putative oxidoreductase 95.3 0.058 2E-06 47.1 8.5 90 132-243 12-103 (286)
457 3ek2_A Enoyl-(acyl-carrier-pro 95.3 0.12 4.2E-06 44.1 10.5 105 129-240 12-153 (271)
458 1g55_A DNA cytosine methyltran 95.3 0.04 1.4E-06 50.0 7.5 72 131-211 2-77 (343)
459 4eso_A Putative oxidoreductase 95.3 0.18 6E-06 43.2 11.4 101 130-240 7-138 (255)
460 3o38_A Short chain dehydrogena 95.3 0.22 7.4E-06 42.6 11.9 78 130-212 21-111 (266)
461 2wtb_A MFP2, fatty acid multif 95.3 0.094 3.2E-06 52.3 10.7 99 132-240 313-427 (725)
462 2iz1_A 6-phosphogluconate dehy 95.3 0.096 3.3E-06 49.5 10.3 95 132-238 6-101 (474)
463 3qha_A Putative oxidoreductase 95.2 0.066 2.3E-06 47.2 8.7 90 131-240 15-105 (296)
464 1rjd_A PPM1P, carboxy methyl t 95.2 0.13 4.5E-06 46.4 10.7 105 129-237 96-229 (334)
465 3r3s_A Oxidoreductase; structu 95.2 0.21 7.3E-06 43.7 11.9 104 130-240 48-185 (294)
466 3ond_A Adenosylhomocysteinase; 95.2 0.037 1.3E-06 52.5 7.2 89 129-240 263-352 (488)
467 3tjr_A Short chain dehydrogena 95.2 0.22 7.6E-06 43.7 12.0 77 129-212 29-118 (301)
468 3svt_A Short-chain type dehydr 95.2 0.31 1.1E-05 42.1 12.7 107 130-240 10-150 (281)
469 2hjr_A Malate dehydrogenase; m 95.1 0.078 2.7E-06 47.7 8.9 101 130-240 13-131 (328)
470 3vku_A L-LDH, L-lactate dehydr 95.1 0.25 8.7E-06 44.4 12.3 106 129-240 7-125 (326)
471 4dll_A 2-hydroxy-3-oxopropiona 95.1 0.12 4E-06 46.1 10.0 92 130-240 30-124 (320)
472 3i83_A 2-dehydropantoate 2-red 95.1 0.05 1.7E-06 48.5 7.6 99 132-244 3-108 (320)
473 3ksu_A 3-oxoacyl-acyl carrier 95.1 0.1 3.5E-06 44.9 9.4 107 129-240 9-147 (262)
474 4ezb_A Uncharacterized conserv 95.1 0.033 1.1E-06 49.8 6.3 92 131-240 24-121 (317)
475 3is3_A 17BETA-hydroxysteroid d 95.1 0.32 1.1E-05 41.9 12.5 106 129-241 16-153 (270)
476 3h9u_A Adenosylhomocysteinase; 95.1 0.039 1.3E-06 51.7 6.9 89 129-240 209-298 (436)
477 3sx2_A Putative 3-ketoacyl-(ac 95.1 0.16 5.5E-06 43.8 10.5 105 129-240 11-157 (278)
478 1wdk_A Fatty oxidation complex 95.1 0.064 2.2E-06 53.5 8.8 101 130-240 313-429 (715)
479 3rkr_A Short chain oxidoreduct 95.1 0.27 9.2E-06 42.1 11.8 77 129-212 27-116 (262)
480 3tfo_A Putative 3-oxoacyl-(acy 95.0 0.25 8.6E-06 42.7 11.7 76 130-212 3-91 (264)
481 2p4q_A 6-phosphogluconate dehy 95.0 0.097 3.3E-06 49.9 9.5 97 131-239 10-108 (497)
482 2zyd_A 6-phosphogluconate dehy 95.0 0.11 3.9E-06 49.2 9.9 96 131-238 15-111 (480)
483 4fn4_A Short chain dehydrogena 94.9 0.15 5.2E-06 44.2 9.9 76 130-212 6-94 (254)
484 4g65_A TRK system potassium up 94.9 0.11 3.8E-06 49.0 9.7 97 130-240 2-102 (461)
485 3gaf_A 7-alpha-hydroxysteroid 94.9 0.22 7.7E-06 42.5 11.0 105 129-240 10-146 (256)
486 1jw9_B Molybdopterin biosynthe 94.9 0.05 1.7E-06 47.0 6.7 91 131-228 31-144 (249)
487 3d1l_A Putative NADP oxidoredu 94.9 0.086 2.9E-06 45.4 8.2 91 131-240 10-102 (266)
488 1t2d_A LDH-P, L-lactate dehydr 94.9 0.095 3.2E-06 47.0 8.7 102 130-240 3-126 (322)
489 3tri_A Pyrroline-5-carboxylate 94.9 0.068 2.3E-06 46.9 7.5 87 132-237 4-95 (280)
490 3h7a_A Short chain dehydrogena 94.8 0.23 8E-06 42.3 10.8 76 130-212 6-93 (252)
491 3edm_A Short chain dehydrogena 94.8 0.21 7.1E-06 42.8 10.5 104 130-240 7-143 (259)
492 2q3e_A UDP-glucose 6-dehydroge 94.8 0.1 3.5E-06 49.2 9.2 102 132-240 6-131 (467)
493 3vtf_A UDP-glucose 6-dehydroge 94.8 0.12 4E-06 48.6 9.4 100 132-240 22-144 (444)
494 3pgx_A Carveol dehydrogenase; 94.8 0.37 1.3E-05 41.6 12.1 77 129-212 13-115 (280)
495 3ktd_A Prephenate dehydrogenas 94.8 0.055 1.9E-06 49.1 6.9 90 131-238 8-99 (341)
496 1spx_A Short-chain reductase f 94.8 0.22 7.5E-06 42.9 10.6 79 130-212 5-96 (278)
497 1zem_A Xylitol dehydrogenase; 94.7 0.39 1.3E-05 41.1 12.0 76 130-212 6-94 (262)
498 1vpd_A Tartronate semialdehyde 94.7 0.12 4E-06 45.2 8.8 89 132-239 6-98 (299)
499 2o3j_A UDP-glucose 6-dehydroge 94.7 0.2 6.8E-06 47.4 10.9 104 132-240 10-135 (481)
500 1pgj_A 6PGDH, 6-PGDH, 6-phosph 94.7 0.13 4.4E-06 48.7 9.6 99 132-238 2-101 (478)
No 1
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=100.00 E-value=5.4e-45 Score=328.20 Aligned_cols=253 Identities=21% Similarity=0.355 Sum_probs=225.8
Q ss_pred HHHHHHHHHHHHhccCCCCCCchhHHHHHHHHHHh---ccC-Ccccccc--cC-chhHHHHHHHHHHHHHHhhhhhhHHH
Q 039591 17 LLIARVMQLHASISKLESLKPSKQVNSLFTQLVKL---CTP-SYSIDIK--DL-PQEVQEMRESLIVLCGRAEGLLELEF 89 (284)
Q Consensus 17 ~~~~~i~~~~~~~~~l~~l~p~~~~~~l~~~L~~~---~~~-~~~~~~~--~~-~~~~~~~~~~l~~l~~~~e~~~E~~~ 89 (284)
....+|.++|+.|+++++++|++.+|++|+.|+++ |.. ..+.+.. .+ +++++.+++.++++|+.++..+|.+|
T Consensus 5 ~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~~vl~~~~~~~l~~~~~~~y~~~~~~~E~~w 84 (298)
T 3fpf_A 5 IYWDKIKRIASRLEGMNYHFDEMDTSGVMPLLDEIEEIAHDSTIDFESAKHILDDAEMNHALSLIRKFYVNLGMKLEMEK 84 (298)
T ss_dssp HHHHHHHHHHHHHGGGTTCGGGCCTTTTHHHHHHHHHHHTCTTSCHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCccccHHHHHHHHHHHHHhcccCCcCHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36789999999999999999999999999977776 331 2222222 33 47999999999999999999999999
Q ss_pred HHHhccCCccccccccccccchhhhhhHHHHHHHHhhccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHH
Q 039591 90 ATFLNKIPQPLNNLNLFPYYGNYVKLASFECRILKENGVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAAN 169 (284)
Q Consensus 90 a~~~~~~~~~~~~l~~fp~~~~y~~l~~~E~~~l~~~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~ 169 (284)
++.+...++||.++..||||.+|..+++.|... ...+++++||||||||+|++++.+|+ .++++|+++|+|++++
T Consensus 85 a~~l~~~~~p~~~l~~fpy~~~~~~l~~~E~~l---a~l~~g~rVLDIGcG~G~~ta~~lA~--~~ga~V~gIDis~~~l 159 (298)
T 3fpf_A 85 AQEVIESDSPWETLRSFYFYPRYLELLKNEAAL---GRFRRGERAVFIGGGPLPLTGILLSH--VYGMRVNVVEIEPDIA 159 (298)
T ss_dssp HHHHHHCSSHHHHHHTSTTHHHHHHHHHHHHHH---TTCCTTCEEEEECCCSSCHHHHHHHH--TTCCEEEEEESSHHHH
T ss_pred HHHHhccCChHHhhccCCCcccHHHHHHHHHHH---cCCCCcCEEEEECCCccHHHHHHHHH--ccCCEEEEEECCHHHH
Confidence 999999999999999999999999999999853 24588999999999988899999987 5789999999999999
Q ss_pred HHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEeccchhhhcC
Q 039591 170 NVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRSAKGARAFLY 249 (284)
Q Consensus 170 ~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~~g~~~~ly 249 (284)
+.|++++++.| + ++++|+++|+.+.. .+.||+|++++.+ +++.++++++.+.|||||+|+++.++++++++|
T Consensus 160 ~~Ar~~~~~~g-l-~~v~~v~gDa~~l~--d~~FDvV~~~a~~----~d~~~~l~el~r~LkPGG~Lvv~~~~~~r~~l~ 231 (298)
T 3fpf_A 160 ELSRKVIEGLG-V-DGVNVITGDETVID--GLEFDVLMVAALA----EPKRRVFRNIHRYVDTETRIIYRTYTGMRAILY 231 (298)
T ss_dssp HHHHHHHHHHT-C-CSEEEEESCGGGGG--GCCCSEEEECTTC----SCHHHHHHHHHHHCCTTCEEEEEECCGGGGGSS
T ss_pred HHHHHHHHhcC-C-CCeEEEECchhhCC--CCCcCEEEECCCc----cCHHHHHHHHHHHcCCCcEEEEEcCcchhhhcc
Confidence 99999998866 5 79999999998864 3789999998764 577899999999999999999999999999999
Q ss_pred CCCCCCCCCCcEEEEEEcCCCceeeEEEEEeec
Q 039591 250 PVVERHDLLDFEVLSIFHPIDEVINSVILVRKP 282 (284)
Q Consensus 250 p~v~~~~l~gf~~~~~~~p~~~v~nsvi~~rk~ 282 (284)
|.+++.++.||+.+.++||.++|+|||+|++|.
T Consensus 232 ~~v~~~~~~gf~~~~~~~p~~~v~N~vv~a~k~ 264 (298)
T 3fpf_A 232 APVSDDDITGFRRAGVVLPSGKVNNTSVLVFKC 264 (298)
T ss_dssp CCCCTGGGTTEEEEEEECCCTTCCCEEEEEEEC
T ss_pred ccCChhhhhhhhheeEECCCCCcCcEEEEEEcc
Confidence 999999889999999999999999999999993
No 2
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.70 E-value=1.9e-16 Score=140.45 Aligned_cols=128 Identities=17% Similarity=0.238 Sum_probs=99.5
Q ss_pred cccccchhhhhhHHHHHHHHhhccCCCCeEEEecCCCChHHHHHHHhhc-CCCcEEEEEeCCHHHHHHHHHHHhhccCCC
Q 039591 105 LFPYYGNYVKLASFECRILKENGVVQPKKVAFVGSGPMPLTSIVMAKNH-LKATHFDNFDIDEAANNVARRIVATDFEFE 183 (284)
Q Consensus 105 ~fp~~~~y~~l~~~E~~~l~~~~~~~~~~VL~iGsGp~G~~ai~la~~~-~~~~~V~~vDis~~~~~~A~~~~~~~~~l~ 183 (284)
+.|+|....+++. . +.....+++.+||||||| +|..++.++++. .++++|+|+|+|+.|++.|+++++..+ ..
T Consensus 49 svP~Y~~~~~~i~---~-l~~~~~~~~~~vLDlGcG-tG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~-~~ 122 (261)
T 4gek_A 49 SVPGYSNIISMIG---M-LAERFVQPGTQVYDLGCS-LGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYK-AP 122 (261)
T ss_dssp HSTTHHHHHHHHH---H-HHHHHCCTTCEEEEETCT-TTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSC-CS
T ss_pred cCCCHHHHHHHHH---H-HHHHhCCCCCEEEEEeCC-CCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhc-cC
Confidence 3477655433322 2 222234788999999999 899999998832 257899999999999999999988755 56
Q ss_pred CCeEEEEcchhhhhccCCCccEEEEcCcC-CCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 184 KRMKFLTGDILQVKEKLGEYDCIFLAALV-GMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 184 ~~v~~~~~D~~~~~~~l~~fD~V~~~~~~-~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.+++|+++|+.+. +.+.||+|++.... ....+++..+++++.+.|||||++++..
T Consensus 123 ~~v~~~~~D~~~~--~~~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e 178 (261)
T 4gek_A 123 TPVDVIEGDIRDI--AIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSE 178 (261)
T ss_dssp SCEEEEESCTTTC--CCCSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ceEEEeecccccc--cccccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEe
Confidence 7899999999875 34789999987654 3456788899999999999999999854
No 3
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.64 E-value=1.4e-15 Score=131.99 Aligned_cols=105 Identities=21% Similarity=0.339 Sum_probs=90.8
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhc-cC-CCccEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKE-KL-GEYDCI 206 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~-~l-~~fD~V 206 (284)
.++.+||||||| .|..++.+++ ..++.+|+++|+|+.+++.|+++++..+ +.++++|+++|+.+... .+ ++||+|
T Consensus 70 ~~~~~vLDiG~G-~G~~~~~la~-~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~~~fD~V 146 (232)
T 3ntv_A 70 NNVKNILEIGTA-IGYSSMQFAS-ISDDIHVTTIERNETMIQYAKQNLATYH-FENQVRIIEGNALEQFENVNDKVYDMI 146 (232)
T ss_dssp HTCCEEEEECCS-SSHHHHHHHT-TCTTCEEEEEECCHHHHHHHHHHHHHTT-CTTTEEEEESCGGGCHHHHTTSCEEEE
T ss_pred cCCCEEEEEeCc-hhHHHHHHHH-hCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEECCHHHHHHhhccCCccEE
Confidence 467899999999 9999999998 6678999999999999999999998755 55789999999987544 33 789999
Q ss_pred EEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 207 FLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 207 ~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
++++... ....+++.+.+.|+|||++++.+
T Consensus 147 ~~~~~~~----~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 147 FIDAAKA----QSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp EEETTSS----SHHHHHHHHGGGEEEEEEEEEEC
T ss_pred EEcCcHH----HHHHHHHHHHHhcCCCeEEEEee
Confidence 9987653 33679999999999999999966
No 4
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.64 E-value=6.7e-16 Score=133.46 Aligned_cols=104 Identities=14% Similarity=0.233 Sum_probs=89.5
Q ss_pred CCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCC-CCeEEEEcchhhhhccC--CCccEEE
Q 039591 131 PKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFE-KRMKFLTGDILQVKEKL--GEYDCIF 207 (284)
Q Consensus 131 ~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~-~~v~~~~~D~~~~~~~l--~~fD~V~ 207 (284)
+.+||||||| .|.+++++++...++++|+++|+|+++++.|+++++..+ +. ++++++++|+.+....+ +.||+||
T Consensus 57 ~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g-~~~~~i~~~~gda~~~l~~~~~~~fD~V~ 134 (221)
T 3dr5_A 57 STGAIAITPA-AGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAG-YSPSRVRFLLSRPLDVMSRLANDSYQLVF 134 (221)
T ss_dssp CCEEEEESTT-HHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTT-CCGGGEEEECSCHHHHGGGSCTTCEEEEE
T ss_pred CCCEEEEcCC-chHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-CCcCcEEEEEcCHHHHHHHhcCCCcCeEE
Confidence 4499999999 999999999843358999999999999999999998855 55 68999999998876554 7899999
Q ss_pred EcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 208 LAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 208 ~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+++.... ...+++.+.+.|||||++++.+
T Consensus 135 ~d~~~~~----~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 135 GQVSPMD----LKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp ECCCTTT----HHHHHHHHHHHEEEEEEEEETT
T ss_pred EcCcHHH----HHHHHHHHHHHcCCCcEEEEeC
Confidence 9986533 3679999999999999999976
No 5
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.63 E-value=1.3e-14 Score=121.48 Aligned_cols=109 Identities=12% Similarity=0.101 Sum_probs=92.1
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhcc--CCCccE
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEK--LGEYDC 205 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~--l~~fD~ 205 (284)
..++.+|||+||| .|..++.+++ .+..+|+++|+|+.+++.|+++++..+ + .+++++++|+.+.... .+.||+
T Consensus 42 ~~~~~~vLDlgcG-~G~~~~~~~~--~~~~~v~~vD~~~~~~~~a~~~~~~~~-~-~~v~~~~~d~~~~~~~~~~~~fD~ 116 (189)
T 3p9n_A 42 DLTGLAVLDLYAG-SGALGLEALS--RGAASVLFVESDQRSAAVIARNIEALG-L-SGATLRRGAVAAVVAAGTTSPVDL 116 (189)
T ss_dssp CCTTCEEEEETCT-TCHHHHHHHH--TTCSEEEEEECCHHHHHHHHHHHHHHT-C-SCEEEEESCHHHHHHHCCSSCCSE
T ss_pred CCCCCEEEEeCCC-cCHHHHHHHH--CCCCeEEEEECCHHHHHHHHHHHHHcC-C-CceEEEEccHHHHHhhccCCCccE
Confidence 3578899999999 8988887776 355689999999999999999988755 4 6899999999886533 378999
Q ss_pred EEEcCcCCCCHHHHHHHHHHHHh--ccccCcEEEEEec
Q 039591 206 IFLAALVGMSKEEKMKIIRHIRK--YMKDGGILLVRSA 241 (284)
Q Consensus 206 V~~~~~~~~~~~~k~~~l~~~~~--~L~pGG~lv~~~~ 241 (284)
|+++...+...++..++++.+.+ +|+|||++++...
T Consensus 117 i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 117 VLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp EEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred EEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEec
Confidence 99998766555677899999998 9999999999763
No 6
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.63 E-value=1.4e-15 Score=136.92 Aligned_cols=110 Identities=17% Similarity=0.190 Sum_probs=91.2
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEE
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIF 207 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~ 207 (284)
..++.+||||||| .|..++.++....++.+|+++|+|+.+++.|++++...+ +..+++|+++|+.+...+ +.||+|+
T Consensus 116 l~~~~~vLDiGcG-~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~-~~fD~v~ 192 (305)
T 3ocj_A 116 LRPGCVVASVPCG-WMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHA-LAGQITLHRQDAWKLDTR-EGYDLLT 192 (305)
T ss_dssp CCTTCEEEETTCT-TCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTST-TGGGEEEEECCGGGCCCC-SCEEEEE
T ss_pred CCCCCEEEEecCC-CCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcC-CCCceEEEECchhcCCcc-CCeEEEE
Confidence 3778999999999 899998886324688999999999999999999988755 556799999999986555 8999999
Q ss_pred EcCcCCC--CHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 208 LAALVGM--SKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 208 ~~~~~~~--~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+.....+ .+.....+++++.+.|||||++++..
T Consensus 193 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 193 SNGLNIYEPDDARVTELYRRFWQALKPGGALVTSF 227 (305)
T ss_dssp CCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 8765432 33444568999999999999999876
No 7
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.63 E-value=7e-15 Score=123.04 Aligned_cols=105 Identities=19% Similarity=0.271 Sum_probs=87.8
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+|||+||| .|..+..+++ .+.+|+++|+|+.+++.|++++...+ + .+++++++|+.+... .+.||+|++
T Consensus 31 ~~~~~vLdiG~G-~G~~~~~l~~---~~~~v~~vD~s~~~~~~a~~~~~~~~-~-~~~~~~~~d~~~~~~-~~~~D~v~~ 103 (199)
T 2xvm_A 31 VKPGKTLDLGCG-NGRNSLYLAA---NGYDVDAWDKNAMSIANVERIKSIEN-L-DNLHTRVVDLNNLTF-DRQYDFILS 103 (199)
T ss_dssp SCSCEEEEETCT-TSHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHHHT-C-TTEEEEECCGGGCCC-CCCEEEEEE
T ss_pred cCCCeEEEEcCC-CCHHHHHHHH---CCCeEEEEECCHHHHHHHHHHHHhCC-C-CCcEEEEcchhhCCC-CCCceEEEE
Confidence 567899999999 8999999998 37899999999999999999987644 3 469999999987543 478999998
Q ss_pred cCcC-CCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 209 AALV-GMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~-~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.... +...++...+++++.+.|+|||++++..
T Consensus 104 ~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 104 TVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp ESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 8654 3344577899999999999999987755
No 8
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.63 E-value=1.6e-15 Score=132.13 Aligned_cols=110 Identities=17% Similarity=0.178 Sum_probs=90.8
Q ss_pred hhccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC--CC
Q 039591 125 ENGVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL--GE 202 (284)
Q Consensus 125 ~~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l--~~ 202 (284)
+....++.+||||||| +|.++..+++ ..+.+|++||+||.+++.|+++.+..+ .+++++.+|+.+....+ +.
T Consensus 55 ~~~~~~G~rVLdiG~G-~G~~~~~~~~--~~~~~v~~id~~~~~~~~a~~~~~~~~---~~~~~~~~~a~~~~~~~~~~~ 128 (236)
T 3orh_A 55 AAASSKGGRVLEVGFG-MAIAASKVQE--APIDEHWIIECNDGVFQRLRDWAPRQT---HKVIPLKGLWEDVAPTLPDGH 128 (236)
T ss_dssp HHHTTTCEEEEEECCT-TSHHHHHHTT--SCEEEEEEEECCHHHHHHHHHHGGGCS---SEEEEEESCHHHHGGGSCTTC
T ss_pred HhhccCCCeEEEECCC-ccHHHHHHHH--hCCcEEEEEeCCHHHHHHHHHHHhhCC---CceEEEeehHHhhcccccccC
Confidence 3345788999999999 9999999987 345789999999999999999987643 67899999998765444 67
Q ss_pred ccEEEEcCcCC----CCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 203 YDCIFLAALVG----MSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 203 fD~V~~~~~~~----~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
||.|+.+.... ....++..+++++.++|||||++++.+
T Consensus 129 FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 129 FDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp EEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred CceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 99999876432 234678899999999999999999876
No 9
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.62 E-value=2.5e-15 Score=129.14 Aligned_cols=108 Identities=14% Similarity=0.250 Sum_probs=88.9
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC------CC
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL------GE 202 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l------~~ 202 (284)
.++.+||||||| .|..++.+++...++++|+++|+|+.+++.|+++++..+ +.++++++++|+.+....+ +.
T Consensus 57 ~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~l~~~~~~~~~~~ 134 (221)
T 3u81_A 57 YSPSLVLELGAY-CGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAG-LQDKVTILNGASQDLIPQLKKKYDVDT 134 (221)
T ss_dssp HCCSEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHT-CGGGEEEEESCHHHHGGGTTTTSCCCC
T ss_pred cCCCEEEEECCC-CCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcC-CCCceEEEECCHHHHHHHHHHhcCCCc
Confidence 567899999999 899999999832358899999999999999999998765 5678999999997754433 47
Q ss_pred ccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 203 YDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 203 fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
||+||+++....+ .+..++++.+ ++|||||++++.+
T Consensus 135 fD~V~~d~~~~~~-~~~~~~~~~~-~~LkpgG~lv~~~ 170 (221)
T 3u81_A 135 LDMVFLDHWKDRY-LPDTLLLEKC-GLLRKGTVLLADN 170 (221)
T ss_dssp CSEEEECSCGGGH-HHHHHHHHHT-TCCCTTCEEEESC
T ss_pred eEEEEEcCCcccc-hHHHHHHHhc-cccCCCeEEEEeC
Confidence 9999999865443 3345677777 9999999999876
No 10
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.61 E-value=1.9e-15 Score=128.58 Aligned_cols=108 Identities=14% Similarity=0.156 Sum_probs=85.6
Q ss_pred ccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhcc----------CCCCCeEEEEcchhhh
Q 039591 127 GVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDF----------EFEKRMKFLTGDILQV 196 (284)
Q Consensus 127 ~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~----------~l~~~v~~~~~D~~~~ 196 (284)
...++.+|||+||| .|..+..|++ .|.+|+|+|+|+.|++.|++..+... ....+++|+++|+.+.
T Consensus 19 ~~~~~~~vLD~GCG-~G~~~~~la~---~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l 94 (203)
T 1pjz_A 19 NVVPGARVLVPLCG-KSQDMSWLSG---QGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFAL 94 (203)
T ss_dssp CCCTTCEEEETTTC-CSHHHHHHHH---HCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSS
T ss_pred ccCCCCEEEEeCCC-CcHhHHHHHH---CCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccC
Confidence 34678899999999 8999999998 37899999999999999998754200 0025799999999876
Q ss_pred hccC-CCccEEEEcCcC-CCCHHHHHHHHHHHHhccccCcEEEE
Q 039591 197 KEKL-GEYDCIFLAALV-GMSKEEKMKIIRHIRKYMKDGGILLV 238 (284)
Q Consensus 197 ~~~l-~~fD~V~~~~~~-~~~~~~k~~~l~~~~~~L~pGG~lv~ 238 (284)
.... +.||+|++.... ....+++..+++++.++|||||++++
T Consensus 95 ~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l 138 (203)
T 1pjz_A 95 TARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLL 138 (203)
T ss_dssp THHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEE
T ss_pred CcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 5432 689999976433 45556788899999999999998443
No 11
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.61 E-value=6.1e-15 Score=129.28 Aligned_cols=106 Identities=23% Similarity=0.326 Sum_probs=90.6
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCC-CcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC---CCcc
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLK-ATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL---GEYD 204 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~-~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l---~~fD 204 (284)
.++.+||||||| .|..++.+++ ..+ +++|+++|+|+.+++.|+++++..+ +.++++++++|+.+....+ +.||
T Consensus 62 ~~~~~VLdiG~G-~G~~~~~la~-~~~~~~~v~~vD~s~~~~~~a~~~~~~~g-~~~~v~~~~~d~~~~l~~~~~~~~fD 138 (248)
T 3tfw_A 62 TQAKRILEIGTL-GGYSTIWMAR-ELPADGQLLTLEADAHHAQVARENLQLAG-VDQRVTLREGPALQSLESLGECPAFD 138 (248)
T ss_dssp HTCSEEEEECCT-TSHHHHHHHT-TSCTTCEEEEEECCHHHHHHHHHHHHHTT-CTTTEEEEESCHHHHHHTCCSCCCCS
T ss_pred cCCCEEEEecCC-chHHHHHHHH-hCCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEEcCHHHHHHhcCCCCCeE
Confidence 567899999999 8999999998 455 7899999999999999999998755 5678999999998754433 4899
Q ss_pred EEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEec
Q 039591 205 CIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 205 ~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
+|++++.. .....+++.+.+.|||||+|++.+.
T Consensus 139 ~V~~d~~~----~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 139 LIFIDADK----PNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp EEEECSCG----GGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred EEEECCch----HHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 99998754 4447899999999999999998773
No 12
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.61 E-value=1e-14 Score=124.29 Aligned_cols=151 Identities=17% Similarity=0.091 Sum_probs=109.1
Q ss_pred hccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccE
Q 039591 126 NGVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDC 205 (284)
Q Consensus 126 ~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~ 205 (284)
....++.+|||+||| .|..+..+++...+..+|+++|+|+.+++.|++++...+ + .+++++++|+.+.....+.||+
T Consensus 33 ~~~~~~~~vLDiG~G-~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~-~~~~~~~~d~~~~~~~~~~fD~ 109 (219)
T 3dh0_A 33 FGLKEGMTVLDVGTG-AGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLG-L-KNVEVLKSEENKIPLPDNTVDF 109 (219)
T ss_dssp HTCCTTCEEEESSCT-TCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHT-C-TTEEEEECBTTBCSSCSSCEEE
T ss_pred hCCCCCCEEEEEecC-CCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcC-C-CcEEEEecccccCCCCCCCeeE
Confidence 345778899999999 898898888833367899999999999999999987755 3 4799999999875434478999
Q ss_pred EEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEeccchhhhcCC----CCCCCC----C--CCcEEEEEEcCCCceeeE
Q 039591 206 IFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRSAKGARAFLYP----VVERHD----L--LDFEVLSIFHPIDEVINS 275 (284)
Q Consensus 206 V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~~g~~~~lyp----~v~~~~----l--~gf~~~~~~~p~~~v~ns 275 (284)
|++....... ++...+++++.+.|+|||++++...........+ .....+ + .||+++......+ ..-
T Consensus 110 v~~~~~l~~~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~--~~~ 186 (219)
T 3dh0_A 110 IFMAFTFHEL-SEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVEVGK--YCF 186 (219)
T ss_dssp EEEESCGGGC-SSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEEETT--TEE
T ss_pred EEeehhhhhc-CCHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEeeCC--ceE
Confidence 9988765433 4568999999999999999998762211110001 011111 1 6999987754433 234
Q ss_pred EEEEeec
Q 039591 276 VILVRKP 282 (284)
Q Consensus 276 vi~~rk~ 282 (284)
.++++|+
T Consensus 187 ~~~~~k~ 193 (219)
T 3dh0_A 187 GVYAMIV 193 (219)
T ss_dssp EEEEECC
T ss_pred EEEEEec
Confidence 6777775
No 13
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.61 E-value=6.1e-15 Score=126.40 Aligned_cols=105 Identities=16% Similarity=0.258 Sum_probs=89.7
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCC-CcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC-----CC
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLK-ATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL-----GE 202 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~-~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l-----~~ 202 (284)
.++.+||||||| .|..++.+++ ..+ +++|+++|+++.+++.|+++++..+ +..+++++++|+.+....+ +.
T Consensus 57 ~~~~~vLdiG~G-~G~~~~~la~-~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~~~~~~ 133 (223)
T 3duw_A 57 QGARNILEIGTL-GGYSTIWLAR-GLSSGGRVVTLEASEKHADIARSNIERAN-LNDRVEVRTGLALDSLQQIENEKYEP 133 (223)
T ss_dssp HTCSEEEEECCT-TSHHHHHHHT-TCCSSCEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEESCHHHHHHHHHHTTCCC
T ss_pred hCCCEEEEecCC-ccHHHHHHHH-hCCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEEcCHHHHHHHHHhcCCCC
Confidence 567899999999 8999999998 455 7899999999999999999998755 5678999999998754332 57
Q ss_pred ccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 203 YDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 203 fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
||+||+++.. .....+++.+.+.|+|||++++.+
T Consensus 134 fD~v~~d~~~----~~~~~~l~~~~~~L~pgG~lv~~~ 167 (223)
T 3duw_A 134 FDFIFIDADK----QNNPAYFEWALKLSRPGTVIIGDN 167 (223)
T ss_dssp CSEEEECSCG----GGHHHHHHHHHHTCCTTCEEEEES
T ss_pred cCEEEEcCCc----HHHHHHHHHHHHhcCCCcEEEEeC
Confidence 9999998764 344789999999999999999876
No 14
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.60 E-value=1.3e-14 Score=122.86 Aligned_cols=108 Identities=12% Similarity=0.146 Sum_probs=92.2
Q ss_pred hhccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCcc
Q 039591 125 ENGVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYD 204 (284)
Q Consensus 125 ~~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD 204 (284)
.....++.+|||+||| .|..++.+++ ..++.+|+++|+|+.+++.|+++++..+ + .+++++++|+.+.....+.||
T Consensus 35 ~l~~~~~~~vLDiG~G-~G~~~~~la~-~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~-~~v~~~~~d~~~~~~~~~~~D 110 (204)
T 3e05_A 35 KLRLQDDLVMWDIGAG-SASVSIEASN-LMPNGRIFALERNPQYLGFIRDNLKKFV-A-RNVTLVEAFAPEGLDDLPDPD 110 (204)
T ss_dssp HTTCCTTCEEEEETCT-TCHHHHHHHH-HCTTSEEEEEECCHHHHHHHHHHHHHHT-C-TTEEEEECCTTTTCTTSCCCS
T ss_pred HcCCCCCCEEEEECCC-CCHHHHHHHH-HCCCCEEEEEeCCHHHHHHHHHHHHHhC-C-CcEEEEeCChhhhhhcCCCCC
Confidence 3445778999999999 8999999998 5677999999999999999999988765 4 689999999977655557899
Q ss_pred EEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 205 CIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 205 ~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+|+++...+ +...+++++.+.|+|||++++..
T Consensus 111 ~i~~~~~~~----~~~~~l~~~~~~LkpgG~l~~~~ 142 (204)
T 3e05_A 111 RVFIGGSGG----MLEEIIDAVDRRLKSEGVIVLNA 142 (204)
T ss_dssp EEEESCCTT----CHHHHHHHHHHHCCTTCEEEEEE
T ss_pred EEEECCCCc----CHHHHHHHHHHhcCCCeEEEEEe
Confidence 999987653 44789999999999999999875
No 15
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.60 E-value=1.3e-14 Score=120.68 Aligned_cols=108 Identities=11% Similarity=0.079 Sum_probs=86.7
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhcc-CCCccEE
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEK-LGEYDCI 206 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~-l~~fD~V 206 (284)
..++.+|||+||| .|..++.+++ .+.+|+++|+|+.+++.|+++++..+ + .+++++++|..+.... .+.||+|
T Consensus 20 ~~~~~~vLDiGcG-~G~~~~~la~---~~~~v~~vD~s~~~l~~a~~~~~~~~-~-~~v~~~~~~~~~l~~~~~~~fD~v 93 (185)
T 3mti_A 20 LDDESIVVDATMG-NGNDTAFLAG---LSKKVYAFDVQEQALGKTSQRLSDLG-I-ENTELILDGHENLDHYVREPIRAA 93 (185)
T ss_dssp CCTTCEEEESCCT-TSHHHHHHHT---TSSEEEEEESCHHHHHHHHHHHHHHT-C-CCEEEEESCGGGGGGTCCSCEEEE
T ss_pred CCCCCEEEEEcCC-CCHHHHHHHH---hCCEEEEEECCHHHHHHHHHHHHHcC-C-CcEEEEeCcHHHHHhhccCCcCEE
Confidence 3678999999999 8999999998 28899999999999999999988755 4 7899999887764322 2679999
Q ss_pred EEcC-cCCC-------CHHHHHHHHHHHHhccccCcEEEEEec
Q 039591 207 FLAA-LVGM-------SKEEKMKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 207 ~~~~-~~~~-------~~~~k~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
+++. .... ...+...+++++.+.|||||++++...
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 136 (185)
T 3mti_A 94 IFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY 136 (185)
T ss_dssp EEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence 9873 2222 335667889999999999999988653
No 16
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.60 E-value=4.9e-15 Score=130.09 Aligned_cols=105 Identities=17% Similarity=0.292 Sum_probs=90.1
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCC-CcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhcc-------C
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLK-ATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEK-------L 200 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~-~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~-------l 200 (284)
.++++||||||| .|++++.+++ ..+ +++|+++|+|+.+++.|+++++..+ +.++++++.+|+.+.... .
T Consensus 78 ~~~~~VLeiG~G-~G~~~~~la~-~~~~~~~v~~iD~s~~~~~~a~~~~~~~g-~~~~i~~~~gda~~~l~~l~~~~~~~ 154 (247)
T 1sui_A 78 INAKNTMEIGVY-TGYSLLATAL-AIPEDGKILAMDINKENYELGLPVIKKAG-VDHKIDFREGPALPVLDEMIKDEKNH 154 (247)
T ss_dssp TTCCEEEEECCG-GGHHHHHHHH-HSCTTCEEEEEESCCHHHHHHHHHHHHTT-CGGGEEEEESCHHHHHHHHHHSGGGT
T ss_pred hCcCEEEEeCCC-cCHHHHHHHH-hCCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCCeEEEECCHHHHHHHHHhccCCC
Confidence 567899999999 9999999998 445 7899999999999999999998755 567899999999875432 3
Q ss_pred CCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 201 GEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 201 ~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+.||+||+++... +...+++.+.+.|||||++++.+
T Consensus 155 ~~fD~V~~d~~~~----~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 155 GSYDFIFVDADKD----NYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp TCBSEEEECSCST----THHHHHHHHHHHBCTTCCEEEEC
T ss_pred CCEEEEEEcCchH----HHHHHHHHHHHhCCCCeEEEEec
Confidence 6899999998653 34789999999999999999976
No 17
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.60 E-value=9.1e-15 Score=128.87 Aligned_cols=107 Identities=12% Similarity=0.085 Sum_probs=86.4
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhh---------cc------CCCCCeEEEEcch
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVAT---------DF------EFEKRMKFLTGDI 193 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~---------~~------~l~~~v~~~~~D~ 193 (284)
.++.+|||+||| .|..+..||+ .|.+|+|+|+|+.+++.|++.... .+ ....+++|+++|+
T Consensus 67 ~~~~~vLD~GCG-~G~~~~~La~---~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~ 142 (252)
T 2gb4_A 67 QSGLRVFFPLCG-KAIEMKWFAD---RGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSI 142 (252)
T ss_dssp CCSCEEEETTCT-TCTHHHHHHH---TTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCT
T ss_pred CCCCeEEEeCCC-CcHHHHHHHH---CCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcc
Confidence 467899999999 8999999998 578999999999999999876531 00 0125799999999
Q ss_pred hhhhccC-CCccEEEEcCcC-CCCHHHHHHHHHHHHhccccCcEEEEE
Q 039591 194 LQVKEKL-GEYDCIFLAALV-GMSKEEKMKIIRHIRKYMKDGGILLVR 239 (284)
Q Consensus 194 ~~~~~~l-~~fD~V~~~~~~-~~~~~~k~~~l~~~~~~L~pGG~lv~~ 239 (284)
.+..... +.||+|+..... ....+++..+++++.++|||||++++.
T Consensus 143 ~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~ 190 (252)
T 2gb4_A 143 FDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVA 190 (252)
T ss_dssp TTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred ccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 9876543 789999986533 445567789999999999999999654
No 18
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.59 E-value=2.6e-14 Score=121.70 Aligned_cols=106 Identities=9% Similarity=0.087 Sum_probs=89.2
Q ss_pred HhhccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCc
Q 039591 124 KENGVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEY 203 (284)
Q Consensus 124 ~~~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~f 203 (284)
......++++|||+||| .|..++.+++ . +.+|+++|+|+++++.|+++++..+ +.++++++++|+.+.......|
T Consensus 49 ~~l~~~~~~~vLDlGcG-~G~~~~~la~-~--~~~v~~vD~s~~~~~~a~~~~~~~g-~~~~v~~~~~d~~~~~~~~~~~ 123 (204)
T 3njr_A 49 AALAPRRGELLWDIGGG-SGSVSVEWCL-A--GGRAITIEPRADRIENIQKNIDTYG-LSPRMRAVQGTAPAALADLPLP 123 (204)
T ss_dssp HHHCCCTTCEEEEETCT-TCHHHHHHHH-T--TCEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEESCTTGGGTTSCCC
T ss_pred HhcCCCCCCEEEEecCC-CCHHHHHHHH-c--CCEEEEEeCCHHHHHHHHHHHHHcC-CCCCEEEEeCchhhhcccCCCC
Confidence 33445778999999999 7999999998 2 8899999999999999999988765 5458999999998855555789
Q ss_pred cEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 204 DCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 204 D~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|+|+++... +.. +++++.+.|||||++++..
T Consensus 124 D~v~~~~~~-----~~~-~l~~~~~~LkpgG~lv~~~ 154 (204)
T 3njr_A 124 EAVFIGGGG-----SQA-LYDRLWEWLAPGTRIVANA 154 (204)
T ss_dssp SEEEECSCC-----CHH-HHHHHHHHSCTTCEEEEEE
T ss_pred CEEEECCcc-----cHH-HHHHHHHhcCCCcEEEEEe
Confidence 999988733 224 9999999999999999876
No 19
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.59 E-value=6.9e-15 Score=126.12 Aligned_cols=105 Identities=20% Similarity=0.269 Sum_probs=89.6
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCC-CcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC------C
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLK-ATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL------G 201 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~-~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l------~ 201 (284)
.++.+||||||| .|..++.+++ ..+ +.+|+++|+++.+++.|+++++..+ +..+++++++|+.+....+ +
T Consensus 63 ~~~~~vLdiG~G-~G~~~~~la~-~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~~~~~~ 139 (225)
T 3tr6_A 63 MQAKKVIDIGTF-TGYSAIAMGL-ALPKDGTLITCDVDEKSTALAKEYWEKAG-LSDKIGLRLSPAKDTLAELIHAGQAW 139 (225)
T ss_dssp HTCSEEEEECCT-TSHHHHHHHT-TCCTTCEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEESCHHHHHHHHHTTTCTT
T ss_pred hCCCEEEEeCCc-chHHHHHHHH-hCCCCCEEEEEeCCHHHHHHHHHHHHHCC-CCCceEEEeCCHHHHHHHhhhccCCC
Confidence 467899999999 8999999998 445 7899999999999999999998755 5677999999997754322 6
Q ss_pred CccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 202 EYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 202 ~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.||+|++++.. .....+++.+.+.|+|||++++.+
T Consensus 140 ~fD~v~~~~~~----~~~~~~l~~~~~~L~pgG~lv~~~ 174 (225)
T 3tr6_A 140 QYDLIYIDADK----ANTDLYYEESLKLLREGGLIAVDN 174 (225)
T ss_dssp CEEEEEECSCG----GGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CccEEEECCCH----HHHHHHHHHHHHhcCCCcEEEEeC
Confidence 89999988764 445789999999999999999977
No 20
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.59 E-value=5.5e-15 Score=128.79 Aligned_cols=106 Identities=22% Similarity=0.301 Sum_probs=90.5
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCC-CcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhcc-------C
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLK-ATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEK-------L 200 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~-~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~-------l 200 (284)
.++++||||||| .|.+++++++ ..+ +++|+++|+|+.+++.|+++++..+ +.++++++.+|+.+.... .
T Consensus 69 ~~~~~VLeiG~G-~G~~~~~la~-~~~~~~~v~~iD~~~~~~~~a~~~~~~~g-~~~~i~~~~gda~~~l~~l~~~~~~~ 145 (237)
T 3c3y_A 69 VNAKKTIEVGVF-TGYSLLLTAL-SIPDDGKITAIDFDREAYEIGLPFIRKAG-VEHKINFIESDAMLALDNLLQGQESE 145 (237)
T ss_dssp TTCCEEEEECCT-TSHHHHHHHH-HSCTTCEEEEEESCHHHHHHHHHHHHHTT-CGGGEEEEESCHHHHHHHHHHSTTCT
T ss_pred hCCCEEEEeCCC-CCHHHHHHHH-hCCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEEcCHHHHHHHHHhccCCC
Confidence 567899999999 9999999998 445 7899999999999999999998755 567899999999875432 3
Q ss_pred CCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEec
Q 039591 201 GEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 201 ~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
+.||+||+++.. .....+++.+.+.|+|||++++.+.
T Consensus 146 ~~fD~I~~d~~~----~~~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 146 GSYDFGFVDADK----PNYIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp TCEEEEEECSCG----GGHHHHHHHHHHHEEEEEEEEEECT
T ss_pred CCcCEEEECCch----HHHHHHHHHHHHhcCCCeEEEEecC
Confidence 689999999765 3447899999999999999999773
No 21
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.59 E-value=1e-14 Score=126.58 Aligned_cols=106 Identities=20% Similarity=0.272 Sum_probs=89.5
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCC-CcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC------C
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLK-ATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL------G 201 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~-~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l------~ 201 (284)
.++.+||||||| .|.+++.+++ ..+ +++|+++|+|+.+++.|+++++..+ +..+++++.+|+.+....+ +
T Consensus 71 ~~~~~vLdiG~G-~G~~~~~la~-~~~~~~~v~~iD~~~~~~~~a~~~~~~~g-~~~~i~~~~~d~~~~l~~l~~~~~~~ 147 (232)
T 3cbg_A 71 TGAKQVLEIGVF-RGYSALAMAL-QLPPDGQIIACDQDPNATAIAKKYWQKAG-VAEKISLRLGPALATLEQLTQGKPLP 147 (232)
T ss_dssp HTCCEEEEECCT-TSHHHHHHHT-TSCTTCEEEEEESCHHHHHHHHHHHHHHT-CGGGEEEEESCHHHHHHHHHTSSSCC
T ss_pred cCCCEEEEecCC-CCHHHHHHHH-hCCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEEcCHHHHHHHHHhcCCCC
Confidence 467899999999 9999999998 444 7899999999999999999987755 5568999999987643332 6
Q ss_pred CccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEec
Q 039591 202 EYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 202 ~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
.||+||+++.. .+...+++.+.+.|+|||++++.+.
T Consensus 148 ~fD~V~~d~~~----~~~~~~l~~~~~~LkpgG~lv~~~~ 183 (232)
T 3cbg_A 148 EFDLIFIDADK----RNYPRYYEIGLNLLRRGGLMVIDNV 183 (232)
T ss_dssp CEEEEEECSCG----GGHHHHHHHHHHTEEEEEEEEEECT
T ss_pred CcCEEEECCCH----HHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 79999998764 3457899999999999999999763
No 22
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.59 E-value=1.1e-15 Score=133.86 Aligned_cols=105 Identities=20% Similarity=0.246 Sum_probs=90.8
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcC-CCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC------C
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHL-KATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL------G 201 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~-~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l------~ 201 (284)
.++++||||||| .|.+++.+|+ .. ++++|+++|+++.+++.|+++++..+ +.++++++++|+.+....+ +
T Consensus 59 ~~~~~VLDiG~G-~G~~t~~la~-~~~~~~~v~~iD~~~~~~~~a~~~~~~~g-~~~~i~~~~gda~~~l~~~~~~~~~~ 135 (242)
T 3r3h_A 59 TRAKKVLELGTF-TGYSALAMSL-ALPDDGQVITCDINEGWTKHAHPYWREAK-QEHKIKLRLGPALDTLHSLLNEGGEH 135 (242)
T ss_dssp HTCSEEEEEESC-CSHHHHHHHH-TSCTTCEEEEEECCCSSCCCSHHHHHHTT-CTTTEEEEESCHHHHHHHHHHHHCSS
T ss_pred cCcCEEEEeeCC-cCHHHHHHHH-hCCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEEcCHHHHHHHHhhccCCC
Confidence 567899999999 9999999998 44 48899999999999999999998855 6678999999998765432 7
Q ss_pred CccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 202 EYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 202 ~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.||+||+++.. .+...+++.+.+.|+|||++++.+
T Consensus 136 ~fD~V~~d~~~----~~~~~~l~~~~~~LkpGG~lv~d~ 170 (242)
T 3r3h_A 136 QFDFIFIDADK----TNYLNYYELALKLVTPKGLIAIDN 170 (242)
T ss_dssp CEEEEEEESCG----GGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CEeEEEEcCCh----HHhHHHHHHHHHhcCCCeEEEEEC
Confidence 89999998764 445779999999999999999976
No 23
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.58 E-value=2.3e-14 Score=121.12 Aligned_cols=138 Identities=12% Similarity=0.120 Sum_probs=103.9
Q ss_pred CCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEEc
Q 039591 130 QPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFLA 209 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~~ 209 (284)
++.+|||+||| .|..++.+++ ..++.+|+++|+|+.+++.|++++...+ + .+++++++|+.+.. ..+.||+|++.
T Consensus 65 ~~~~vLDiG~G-~G~~~~~l~~-~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~-~~v~~~~~d~~~~~-~~~~~D~i~~~ 139 (207)
T 1jsx_A 65 QGERFIDVGTG-PGLPGIPLSI-VRPEAHFTLLDSLGKRVRFLRQVQHELK-L-ENIEPVQSRVEEFP-SEPPFDGVISR 139 (207)
T ss_dssp CSSEEEEETCT-TTTTHHHHHH-HCTTSEEEEEESCHHHHHHHHHHHHHTT-C-SSEEEEECCTTTSC-CCSCEEEEECS
T ss_pred CCCeEEEECCC-CCHHHHHHHH-HCCCCEEEEEeCCHHHHHHHHHHHHHcC-C-CCeEEEecchhhCC-ccCCcCEEEEe
Confidence 47899999999 8999999998 5678999999999999999999988755 3 34999999998754 23689999976
Q ss_pred CcCCCCHHHHHHHHHHHHhccccCcEEEEEeccchhhhcCCCCCCCCCCCcEEEE---EEcCCCceeeEEEEEeec
Q 039591 210 ALVGMSKEEKMKIIRHIRKYMKDGGILLVRSAKGARAFLYPVVERHDLLDFEVLS---IFHPIDEVINSVILVRKP 282 (284)
Q Consensus 210 ~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~~g~~~~lyp~v~~~~l~gf~~~~---~~~p~~~v~nsvi~~rk~ 282 (284)
.. .+...+++.+.+.|+|||.+++.........+- ....||+++. ...|......++++.+|.
T Consensus 140 ~~-----~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~k~ 205 (207)
T 1jsx_A 140 AF-----ASLNDMVSWCHHLPGEQGRFYALKGQMPEDEIA-----LLPEEYQVESVVKLQVPALDGERHLVVIKAN 205 (207)
T ss_dssp CS-----SSHHHHHHHHTTSEEEEEEEEEEESSCCHHHHH-----TSCTTEEEEEEEEEECC--CCEEEEEEEEEC
T ss_pred cc-----CCHHHHHHHHHHhcCCCcEEEEEeCCCchHHHH-----HHhcCCceeeeeeeccCCCCCceEEEEEEec
Confidence 53 234789999999999999999875321111110 0123898875 256766777788888874
No 24
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.58 E-value=2.3e-14 Score=117.91 Aligned_cols=106 Identities=14% Similarity=0.102 Sum_probs=88.1
Q ss_pred hccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC-CCcc
Q 039591 126 NGVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL-GEYD 204 (284)
Q Consensus 126 ~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l-~~fD 204 (284)
....++.+|||+||| .|..++.+++ ..++.+|+++|+|+.+++.|++++...+ +.+++ ++++|+.+..... +.||
T Consensus 21 ~~~~~~~~vldiG~G-~G~~~~~l~~-~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~~-~~~~d~~~~~~~~~~~~D 96 (178)
T 3hm2_A 21 LAPKPHETLWDIGGG-SGSIAIEWLR-STPQTTAVCFEISEERRERILSNAINLG-VSDRI-AVQQGAPRAFDDVPDNPD 96 (178)
T ss_dssp HCCCTTEEEEEESTT-TTHHHHHHHT-TSSSEEEEEECSCHHHHHHHHHHHHTTT-CTTSE-EEECCTTGGGGGCCSCCS
T ss_pred hcccCCCeEEEeCCC-CCHHHHHHHH-HCCCCeEEEEeCCHHHHHHHHHHHHHhC-CCCCE-EEecchHhhhhccCCCCC
Confidence 344678899999999 7999999998 5578999999999999999999988755 45578 8889987644444 7899
Q ss_pred EEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 205 CIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 205 ~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+|++....+. ..+++++.+.|+|||++++..
T Consensus 97 ~i~~~~~~~~-----~~~l~~~~~~L~~gG~l~~~~ 127 (178)
T 3hm2_A 97 VIFIGGGLTA-----PGVFAAAWKRLPVGGRLVANA 127 (178)
T ss_dssp EEEECC-TTC-----TTHHHHHHHTCCTTCEEEEEE
T ss_pred EEEECCcccH-----HHHHHHHHHhcCCCCEEEEEe
Confidence 9998876643 679999999999999999866
No 25
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.58 E-value=4.8e-14 Score=125.36 Aligned_cols=104 Identities=18% Similarity=0.229 Sum_probs=88.0
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+|||+||| .|..+..+++ .+.+|+++|+|+.+++.|++++...+ .+++++++|+.+... .+.||+|++
T Consensus 119 ~~~~~vLD~GcG-~G~~~~~l~~---~g~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~d~~~~~~-~~~fD~i~~ 190 (286)
T 3m70_A 119 ISPCKVLDLGCG-QGRNSLYLSL---LGYDVTSWDHNENSIAFLNETKEKEN---LNISTALYDINAANI-QENYDFIVS 190 (286)
T ss_dssp SCSCEEEEESCT-TCHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCGGGCCC-CSCEEEEEE
T ss_pred cCCCcEEEECCC-CCHHHHHHHH---CCCeEEEEECCHHHHHHHHHHHHHcC---CceEEEEeccccccc-cCCccEEEE
Confidence 478899999999 8999999998 37799999999999999999988744 389999999987543 478999999
Q ss_pred cCcC-CCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 209 AALV-GMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~-~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.... +...++...+++++.+.|+|||++++..
T Consensus 191 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 191 TVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp CSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 8755 3344667899999999999999977755
No 26
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.58 E-value=4.9e-14 Score=118.32 Aligned_cols=111 Identities=13% Similarity=0.129 Sum_probs=89.9
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC-CCccEE
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL-GEYDCI 206 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l-~~fD~V 206 (284)
..++.+|||+||| .|..++.+++...++++|+++|+|+.+++.|+++++..+ +..+++++++|+.+..... ++||+|
T Consensus 20 ~~~~~~vLDlGcG-~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~~fD~v 97 (197)
T 3eey_A 20 VKEGDTVVDATCG-NGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLN-LIDRVTLIKDGHQNMDKYIDCPVKAV 97 (197)
T ss_dssp CCTTCEEEESCCT-TSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTT-CGGGEEEECSCGGGGGGTCCSCEEEE
T ss_pred CCCCCEEEEcCCC-CCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCCeEEEECCHHHHhhhccCCceEE
Confidence 4678899999999 799999998833356799999999999999999988754 4568999999998764222 789999
Q ss_pred EEcCcC--------CCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 207 FLAALV--------GMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 207 ~~~~~~--------~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+++... ....++...+++++.+.|||||++++..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 139 (197)
T 3eey_A 98 MFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVI 139 (197)
T ss_dssp EEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEE
Confidence 987633 1123455779999999999999999875
No 27
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.58 E-value=7.4e-15 Score=127.81 Aligned_cols=143 Identities=17% Similarity=0.184 Sum_probs=104.0
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhcc---CCCccE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEK---LGEYDC 205 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~---l~~fD~ 205 (284)
.++.+||||||| .|..++.+++ ..++.+|+++|+|+.+++.|+++++..+ + .+++++++|+.+.... .+.||+
T Consensus 69 ~~~~~vLDiG~G-~G~~~~~la~-~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~-~~v~~~~~d~~~~~~~~~~~~~fD~ 144 (240)
T 1xdz_A 69 NQVNTICDVGAG-AGFPSLPIKI-CFPHLHVTIVDSLNKRITFLEKLSEALQ-L-ENTTFCHDRAETFGQRKDVRESYDI 144 (240)
T ss_dssp GGCCEEEEECSS-SCTTHHHHHH-HCTTCEEEEEESCHHHHHHHHHHHHHHT-C-SSEEEEESCHHHHTTCTTTTTCEEE
T ss_pred CCCCEEEEecCC-CCHHHHHHHH-hCCCCEEEEEeCCHHHHHHHHHHHHHcC-C-CCEEEEeccHHHhcccccccCCccE
Confidence 467899999999 8999999997 4588999999999999999999988765 4 3699999999876532 368999
Q ss_pred EEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEeccchhhhcCCCCCC-CCCCCcEEEEE---EcCCCceeeEEEEEee
Q 039591 206 IFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRSAKGARAFLYPVVER-HDLLDFEVLSI---FHPIDEVINSVILVRK 281 (284)
Q Consensus 206 V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~~g~~~~lyp~v~~-~~l~gf~~~~~---~~p~~~v~nsvi~~rk 281 (284)
|++.+. .+...+++.+.++|+|||++++........-+ ..+.. -...||++... .+|..+....+++++|
T Consensus 145 V~~~~~-----~~~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~-~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~l~~~~k 218 (240)
T 1xdz_A 145 VTARAV-----ARLSVLSELCLPLVKKNGLFVALKAASAEEEL-NAGKKAITTLGGELENIHSFKLPIEESDRNIMVIRK 218 (240)
T ss_dssp EEEECC-----SCHHHHHHHHGGGEEEEEEEEEEECC-CHHHH-HHHHHHHHHTTEEEEEEEEEECTTTCCEEEEEEEEE
T ss_pred EEEecc-----CCHHHHHHHHHHhcCCCCEEEEEeCCCchHHH-HHHHHHHHHcCCeEeEEEEEecCCCCCceEEEEEEe
Confidence 998773 23478999999999999999886422111000 00000 01257877643 4576555566777766
No 28
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.58 E-value=1.7e-14 Score=124.61 Aligned_cols=106 Identities=17% Similarity=0.214 Sum_probs=88.2
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+|||+||| .|..+..+++ ++.+|+++|+|+.+++.|+++....+ ...+++|+++|+.+.. ..+.||+|++
T Consensus 65 ~~~~~vLDiGcG-~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~-~~~~fD~v~~ 138 (235)
T 3lcc_A 65 LPLGRALVPGCG-GGHDVVAMAS---PERFVVGLDISESALAKANETYGSSP-KAEYFSFVKEDVFTWR-PTELFDLIFD 138 (235)
T ss_dssp SCCEEEEEETCT-TCHHHHHHCB---TTEEEEEECSCHHHHHHHHHHHTTSG-GGGGEEEECCCTTTCC-CSSCEEEEEE
T ss_pred CCCCCEEEeCCC-CCHHHHHHHh---CCCeEEEEECCHHHHHHHHHHhhccC-CCcceEEEECchhcCC-CCCCeeEEEE
Confidence 345699999999 8999998887 78899999999999999999987633 3467999999998754 2368999998
Q ss_pred cCcC-CCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 209 AALV-GMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~-~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.... ...+++...+++++.+.|+|||++++..
T Consensus 139 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 171 (235)
T 3lcc_A 139 YVFFCAIEPEMRPAWAKSMYELLKPDGELITLM 171 (235)
T ss_dssp ESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEE
Confidence 7654 3344578899999999999999999865
No 29
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.57 E-value=3.7e-14 Score=121.04 Aligned_cols=109 Identities=12% Similarity=0.230 Sum_probs=88.3
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCC----CeEEEEcchhhhhccCCCcc
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEK----RMKFLTGDILQVKEKLGEYD 204 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~----~v~~~~~D~~~~~~~l~~fD 204 (284)
.++.+||||||| .|..+..+++ ..+..+|+++|+|+.+++.|++++...+ +.. +++++++|+.......++||
T Consensus 28 ~~~~~vLDiGcG-~G~~~~~l~~-~~~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~fD 104 (219)
T 3jwg_A 28 VNAKKVIDLGCG-EGNLLSLLLK-DKSFEQITGVDVSYSVLERAKDRLKIDR-LPEMQRKRISLFQSSLVYRDKRFSGYD 104 (219)
T ss_dssp TTCCEEEEETCT-TCHHHHHHHT-STTCCEEEEEESCHHHHHHHHHHHTGGG-SCHHHHTTEEEEECCSSSCCGGGTTCS
T ss_pred cCCCEEEEecCC-CCHHHHHHHh-cCCCCEEEEEECCHHHHHHHHHHHHhhc-cccccCcceEEEeCcccccccccCCCC
Confidence 578899999999 8999999998 4556899999999999999999987643 333 89999999865443347899
Q ss_pred EEEEcCcC-CCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 205 CIFLAALV-GMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 205 ~V~~~~~~-~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+|++.... +...++...+++++.+.|||||+++...
T Consensus 105 ~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 141 (219)
T 3jwg_A 105 AATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTP 141 (219)
T ss_dssp EEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred EEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEcc
Confidence 99987655 4444566899999999999999776654
No 30
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.57 E-value=1.2e-14 Score=123.74 Aligned_cols=104 Identities=19% Similarity=0.321 Sum_probs=88.2
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCC-CcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC-CCccEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLK-ATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL-GEYDCI 206 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~-~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l-~~fD~V 206 (284)
.++.+||||||| .|..++.+++ ..+ +++|+++|+|+.+++.|+++++..+ +.++++++++|+.+....+ + ||+|
T Consensus 55 ~~~~~vLdiG~G-~G~~~~~la~-~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~-fD~v 130 (210)
T 3c3p_A 55 KQPQLVVVPGDG-LGCASWWFAR-AISISSRVVMIDPDRDNVEHARRMLHDNG-LIDRVELQVGDPLGIAAGQRD-IDIL 130 (210)
T ss_dssp HCCSEEEEESCG-GGHHHHHHHT-TSCTTCEEEEEESCHHHHHHHHHHHHHHS-GGGGEEEEESCHHHHHTTCCS-EEEE
T ss_pred hCCCEEEEEcCC-ccHHHHHHHH-hCCCCCEEEEEECCHHHHHHHHHHHHHCC-CCceEEEEEecHHHHhccCCC-CCEE
Confidence 467899999999 9999999998 445 7899999999999999999988755 5568999999998754333 5 9999
Q ss_pred EEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 207 FLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 207 ~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+++... .+...+++++.+.|+|||++++.+
T Consensus 131 ~~~~~~----~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 131 FMDCDV----FNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp EEETTT----SCHHHHHHHHGGGEEEEEEEEEES
T ss_pred EEcCCh----hhhHHHHHHHHHhcCCCeEEEEEC
Confidence 998654 334789999999999999999866
No 31
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.56 E-value=1.4e-14 Score=126.38 Aligned_cols=108 Identities=15% Similarity=0.124 Sum_probs=89.4
Q ss_pred ccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEE
Q 039591 127 GVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCI 206 (284)
Q Consensus 127 ~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V 206 (284)
...++.+||||||| .|..+..+++ .. +.+|+++|+|+.+++.|+++++..+ +..+++|+++|+.+... .+.||+|
T Consensus 33 ~~~~~~~VLDiGcG-~G~~~~~la~-~~-~~~v~gvD~s~~~l~~a~~~~~~~~-~~~~v~~~~~d~~~~~~-~~~fD~V 107 (256)
T 1nkv_A 33 RMKPGTRILDLGSG-SGEMLCTWAR-DH-GITGTGIDMSSLFTAQAKRRAEELG-VSERVHFIHNDAAGYVA-NEKCDVA 107 (256)
T ss_dssp CCCTTCEEEEETCT-TCHHHHHHHH-HT-CCEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEESCCTTCCC-SSCEEEE
T ss_pred CCCCCCEEEEECCC-CCHHHHHHHH-hc-CCeEEEEeCCHHHHHHHHHHHHhcC-CCcceEEEECChHhCCc-CCCCCEE
Confidence 34778899999999 7989999987 33 7799999999999999999987755 55689999999987544 4789999
Q ss_pred EEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 207 FLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 207 ~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
++....... .+...+++++.+.|||||++++..
T Consensus 108 ~~~~~~~~~-~~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 108 ACVGATWIA-GGFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp EEESCGGGT-SSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred EECCChHhc-CCHHHHHHHHHHHcCCCeEEEEec
Confidence 986544322 356889999999999999999865
No 32
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.56 E-value=4.2e-14 Score=122.80 Aligned_cols=109 Identities=11% Similarity=0.057 Sum_probs=91.4
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
+++.+|+||||| .|+.++.+++ ..+..+|+++|+|+.+++.|+++++..+ +.++++++++|+.+...+.++||+|++
T Consensus 20 ~~g~~VlDIGtG-sG~l~i~la~-~~~~~~V~AvDi~~~al~~A~~N~~~~g-l~~~I~~~~gD~l~~~~~~~~~D~Ivi 96 (230)
T 3lec_A 20 PKGARLLDVGSD-HAYLPIFLLQ-MGYCDFAIAGEVVNGPYQSALKNVSEHG-LTSKIDVRLANGLSAFEEADNIDTITI 96 (230)
T ss_dssp CTTEEEEEETCS-TTHHHHHHHH-TTCEEEEEEEESSHHHHHHHHHHHHHTT-CTTTEEEEECSGGGGCCGGGCCCEEEE
T ss_pred CCCCEEEEECCc-hHHHHHHHHH-hCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEECchhhccccccccCEEEE
Confidence 577899999999 9999999998 4566789999999999999999998865 778899999999876543247999998
Q ss_pred cCcCCCCHHHHHHHHHHHHhccccCcEEEEEeccc
Q 039591 209 AALVGMSKEEKMKIIRHIRKYMKDGGILLVRSAKG 243 (284)
Q Consensus 209 ~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~~g 243 (284)
++.. .+--.++++...+.|+++|.+++..-.+
T Consensus 97 aGmG---g~lI~~IL~~~~~~l~~~~~lIlqp~~~ 128 (230)
T 3lec_A 97 CGMG---GRLIADILNNDIDKLQHVKTLVLQPNNR 128 (230)
T ss_dssp EEEC---HHHHHHHHHHTGGGGTTCCEEEEEESSC
T ss_pred eCCc---hHHHHHHHHHHHHHhCcCCEEEEECCCC
Confidence 7543 2445789999999999999999977433
No 33
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.56 E-value=4e-14 Score=122.64 Aligned_cols=109 Identities=13% Similarity=0.067 Sum_probs=90.4
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
+++.+|+||||| .|+.++.+++ ..+..+|+++|+|+.+++.|+++++..+ +.++++++.+|+.+....-++||+|++
T Consensus 14 ~~g~~VlDIGtG-sG~l~i~la~-~~~~~~V~avDi~~~al~~A~~N~~~~g-l~~~i~~~~~d~l~~l~~~~~~D~Ivi 90 (225)
T 3kr9_A 14 SQGAILLDVGSD-HAYLPIELVE-RGQIKSAIAGEVVEGPYQSAVKNVEAHG-LKEKIQVRLANGLAAFEETDQVSVITI 90 (225)
T ss_dssp CTTEEEEEETCS-TTHHHHHHHH-TTSEEEEEEEESSHHHHHHHHHHHHHTT-CTTTEEEEECSGGGGCCGGGCCCEEEE
T ss_pred CCCCEEEEeCCC-cHHHHHHHHH-hCCCCEEEEEECCHHHHHHHHHHHHHcC-CCceEEEEECchhhhcccCcCCCEEEE
Confidence 577899999999 9999999998 5667899999999999999999998865 677899999999764432136999998
Q ss_pred cCcCCCCHHHHHHHHHHHHhccccCcEEEEEeccc
Q 039591 209 AALVGMSKEEKMKIIRHIRKYMKDGGILLVRSAKG 243 (284)
Q Consensus 209 ~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~~g 243 (284)
+..- .+--.++++.+.+.|+|+|.+++..-.+
T Consensus 91 aG~G---g~~i~~Il~~~~~~L~~~~~lVlq~~~~ 122 (225)
T 3kr9_A 91 AGMG---GRLIARILEEGLGKLANVERLILQPNNR 122 (225)
T ss_dssp EEEC---HHHHHHHHHHTGGGCTTCCEEEEEESSC
T ss_pred cCCC---hHHHHHHHHHHHHHhCCCCEEEEECCCC
Confidence 6533 2335789999999999999999977443
No 34
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.56 E-value=6.2e-14 Score=119.61 Aligned_cols=109 Identities=10% Similarity=0.186 Sum_probs=88.6
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCC----CeEEEEcchhhhhccCCCcc
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEK----RMKFLTGDILQVKEKLGEYD 204 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~----~v~~~~~D~~~~~~~l~~fD 204 (284)
.++.+|||+||| .|..+..+++ ..+..+|+++|+|+.+++.|++++...+ +.. +++++++|+.......++||
T Consensus 28 ~~~~~vLDiGcG-~G~~~~~l~~-~~~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~fD 104 (217)
T 3jwh_A 28 SNARRVIDLGCG-QGNLLKILLK-DSFFEQITGVDVSYRSLEIAQERLDRLR-LPRNQWERLQLIQGALTYQDKRFHGYD 104 (217)
T ss_dssp TTCCEEEEETCT-TCHHHHHHHH-CTTCSEEEEEESCHHHHHHHHHHHTTCC-CCHHHHTTEEEEECCTTSCCGGGCSCS
T ss_pred cCCCEEEEeCCC-CCHHHHHHHh-hCCCCEEEEEECCHHHHHHHHHHHHHhc-CCcccCcceEEEeCCcccccccCCCcC
Confidence 577899999999 8999999998 4556799999999999999999987643 332 79999999865433337899
Q ss_pred EEEEcCcC-CCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 205 CIFLAALV-GMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 205 ~V~~~~~~-~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+|++.... +...++...+++++.+.|||||++++..
T Consensus 105 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 105 AATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp EEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred EEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 99987655 3444566899999999999999877655
No 35
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.56 E-value=1.8e-14 Score=126.76 Aligned_cols=140 Identities=12% Similarity=0.117 Sum_probs=103.6
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhcc---CCCccE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEK---LGEYDC 205 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~---l~~fD~ 205 (284)
.++.+||||||| .|+.++.+|. ..++.+|+++|+|+.+++.|+++++..+ + .+++++++|+.+.... .+.||+
T Consensus 79 ~~~~~vLDiG~G-~G~~~i~la~-~~~~~~v~~vD~s~~~~~~a~~~~~~~~-l-~~v~~~~~d~~~~~~~~~~~~~fD~ 154 (249)
T 3g89_A 79 QGPLRVLDLGTG-AGFPGLPLKI-VRPELELVLVDATRKKVAFVERAIEVLG-L-KGARALWGRAEVLAREAGHREAYAR 154 (249)
T ss_dssp CSSCEEEEETCT-TTTTHHHHHH-HCTTCEEEEEESCHHHHHHHHHHHHHHT-C-SSEEEEECCHHHHTTSTTTTTCEEE
T ss_pred CCCCEEEEEcCC-CCHHHHHHHH-HCCCCEEEEEECCHHHHHHHHHHHHHhC-C-CceEEEECcHHHhhcccccCCCceE
Confidence 467899999999 9999999998 5688999999999999999999998866 4 4599999999886542 268999
Q ss_pred EEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEeccchhhhcCCCCCCC----CCCCcEEEEE---EcCCCceeeEEEE
Q 039591 206 IFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRSAKGARAFLYPVVERH----DLLDFEVLSI---FHPIDEVINSVIL 278 (284)
Q Consensus 206 V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~~g~~~~lyp~v~~~----~l~gf~~~~~---~~p~~~v~nsvi~ 278 (284)
|++.+.. +...+++.+.+.|||||++++..+.....-+ ... ...||++..+ ..|..+-.-++++
T Consensus 155 I~s~a~~-----~~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~----~~~~~~l~~~G~~~~~~~~~~~p~~~~~R~l~~ 225 (249)
T 3g89_A 155 AVARAVA-----PLCVLSELLLPFLEVGGAAVAMKGPRVEEEL----APLPPALERLGGRLGEVLALQLPLSGEARHLVV 225 (249)
T ss_dssp EEEESSC-----CHHHHHHHHGGGEEEEEEEEEEECSCCHHHH----TTHHHHHHHHTEEEEEEEEEECTTTCCEEEEEE
T ss_pred EEECCcC-----CHHHHHHHHHHHcCCCeEEEEEeCCCcHHHH----HHHHHHHHHcCCeEEEEEEeeCCCCCCcEEEEE
Confidence 9997643 2368999999999999998875521111100 000 1137766554 3465455566777
Q ss_pred Eee
Q 039591 279 VRK 281 (284)
Q Consensus 279 ~rk 281 (284)
.+|
T Consensus 226 ~~k 228 (249)
T 3g89_A 226 LEK 228 (249)
T ss_dssp EEE
T ss_pred EEe
Confidence 666
No 36
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.56 E-value=2e-14 Score=126.57 Aligned_cols=106 Identities=19% Similarity=0.225 Sum_probs=90.7
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+||||||| .|..++.+++ .++++|+++|+|+.+++.|+++++..+ +..+++|+++|+.+.....+.||+|++
T Consensus 45 ~~~~~vLDiGcG-~G~~~~~la~--~~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~fD~i~~ 120 (267)
T 3kkz_A 45 TEKSLIADIGCG-TGGQTMVLAG--HVTGQVTGLDFLSGFIDIFNRNARQSG-LQNRVTGIVGSMDDLPFRNEELDLIWS 120 (267)
T ss_dssp CTTCEEEEETCT-TCHHHHHHHT--TCSSEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEECCTTSCCCCTTCEEEEEE
T ss_pred CCCCEEEEeCCC-CCHHHHHHHh--ccCCEEEEEeCCHHHHHHHHHHHHHcC-CCcCcEEEEcChhhCCCCCCCEEEEEE
Confidence 678999999999 8999999998 377799999999999999999988755 567899999999875434478999999
Q ss_pred cCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 209 AALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
....... +...+++++.+.|||||++++..
T Consensus 121 ~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 121 EGAIYNI--GFERGLNEWRKYLKKGGYLAVSE 150 (267)
T ss_dssp SSCGGGT--CHHHHHHHHGGGEEEEEEEEEEE
T ss_pred cCCceec--CHHHHHHHHHHHcCCCCEEEEEE
Confidence 8765433 45789999999999999999875
No 37
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.56 E-value=2.5e-14 Score=124.76 Aligned_cols=106 Identities=19% Similarity=0.222 Sum_probs=89.7
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+||||||| .|..+..+++ ..+ .+|+++|+|+.+++.|++++...+ +..+++++++|+.+.....+.||+|++
T Consensus 45 ~~~~~vLDiG~G-~G~~~~~l~~-~~~-~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~fD~v~~ 120 (257)
T 3f4k_A 45 TDDAKIADIGCG-TGGQTLFLAD-YVK-GQITGIDLFPDFIEIFNENAVKAN-CADRVKGITGSMDNLPFQNEELDLIWS 120 (257)
T ss_dssp CTTCEEEEETCT-TSHHHHHHHH-HCC-SEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEECCTTSCSSCTTCEEEEEE
T ss_pred CCCCeEEEeCCC-CCHHHHHHHH-hCC-CeEEEEECCHHHHHHHHHHHHHcC-CCCceEEEECChhhCCCCCCCEEEEEe
Confidence 567899999999 8999999998 343 499999999999999999988755 567799999999765444478999999
Q ss_pred cCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 209 AALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.....+. +...+++++.+.|||||++++..
T Consensus 121 ~~~l~~~--~~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 121 EGAIYNI--GFERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp ESCSCCC--CHHHHHHHHHTTEEEEEEEEEEE
T ss_pred cChHhhc--CHHHHHHHHHHHcCCCcEEEEEE
Confidence 8766443 46789999999999999999876
No 38
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.55 E-value=8.7e-15 Score=126.51 Aligned_cols=105 Identities=25% Similarity=0.416 Sum_probs=89.4
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhcc---CCCccE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEK---LGEYDC 205 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~---l~~fD~ 205 (284)
.++.+|||+||| .|..++.+++ ..++.+|+++|+|+.+++.|+++++..+ +..+++++++|+.+.... .+.||+
T Consensus 53 ~~~~~vLdiG~G-~G~~~~~la~-~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~~~~fD~ 129 (233)
T 2gpy_A 53 AAPARILEIGTA-IGYSAIRMAQ-ALPEATIVSIERDERRYEEAHKHVKALG-LESRIELLFGDALQLGEKLELYPLFDV 129 (233)
T ss_dssp HCCSEEEEECCT-TSHHHHHHHH-HCTTCEEEEECCCHHHHHHHHHHHHHTT-CTTTEEEECSCGGGSHHHHTTSCCEEE
T ss_pred cCCCEEEEecCC-CcHHHHHHHH-HCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEECCHHHHHHhcccCCCccE
Confidence 567899999999 8999999998 5678999999999999999999988755 556899999999874322 268999
Q ss_pred EEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 206 IFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 206 V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|+++.... +...+++.+.+.|+|||++++.+
T Consensus 130 I~~~~~~~----~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 130 LFIDAAKG----QYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp EEEEGGGS----CHHHHHHHHGGGEEEEEEEEEET
T ss_pred EEECCCHH----HHHHHHHHHHHHcCCCeEEEEEc
Confidence 99987653 34789999999999999999975
No 39
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.55 E-value=7.2e-14 Score=120.51 Aligned_cols=104 Identities=12% Similarity=0.143 Sum_probs=86.7
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+|||+||| .|..+..+++ .+.+|+++|+|+.+++.|+++....+ .+++++++|+.+.... +.||+|++
T Consensus 36 ~~~~~vLdiG~G-~G~~~~~l~~---~~~~~~~~D~s~~~~~~a~~~~~~~~---~~~~~~~~d~~~~~~~-~~fD~v~~ 107 (246)
T 1y8c_A 36 LVFDDYLDLACG-TGNLTENLCP---KFKNTWAVDLSQEMLSEAENKFRSQG---LKPRLACQDISNLNIN-RKFDLITC 107 (246)
T ss_dssp CCTTEEEEETCT-TSTTHHHHGG---GSSEEEEECSCHHHHHHHHHHHHHTT---CCCEEECCCGGGCCCS-CCEEEEEE
T ss_pred CCCCeEEEeCCC-CCHHHHHHHH---CCCcEEEEECCHHHHHHHHHHHhhcC---CCeEEEecccccCCcc-CCceEEEE
Confidence 367899999999 8999999988 36799999999999999999987643 3799999999875444 78999998
Q ss_pred cC-cCC-C-CHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 209 AA-LVG-M-SKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~-~~~-~-~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.. ..+ . ..++...+++++.+.|+|||++++..
T Consensus 108 ~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 142 (246)
T 1y8c_A 108 CLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDI 142 (246)
T ss_dssp CTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred cCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 76 443 2 23677899999999999999999843
No 40
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.55 E-value=7.1e-14 Score=123.12 Aligned_cols=110 Identities=15% Similarity=0.266 Sum_probs=91.0
Q ss_pred hccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccE
Q 039591 126 NGVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDC 205 (284)
Q Consensus 126 ~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~ 205 (284)
....++.+||||||| .|..+..+++ . .+.+|+++|+|+.+++.|++++...+ +..+++++++|+.+.....+.||+
T Consensus 57 ~~~~~~~~vLDiGcG-~G~~~~~l~~-~-~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~fD~ 132 (273)
T 3bus_A 57 LDVRSGDRVLDVGCG-IGKPAVRLAT-A-RDVRVTGISISRPQVNQANARATAAG-LANRVTFSYADAMDLPFEDASFDA 132 (273)
T ss_dssp SCCCTTCEEEEESCT-TSHHHHHHHH-H-SCCEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEECCTTSCCSCTTCEEE
T ss_pred cCCCCCCEEEEeCCC-CCHHHHHHHH-h-cCCEEEEEeCCHHHHHHHHHHHHhcC-CCcceEEEECccccCCCCCCCccE
Confidence 334678999999999 8988989887 3 37899999999999999999987755 567899999999875443478999
Q ss_pred EEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 206 IFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 206 V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|++.....+. +++..+++++.+.|||||++++..
T Consensus 133 v~~~~~l~~~-~~~~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 133 VWALESLHHM-PDRGRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp EEEESCTTTS-SCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred EEEechhhhC-CCHHHHHHHHHHHcCCCeEEEEEE
Confidence 9987655433 455899999999999999999866
No 41
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.55 E-value=2.4e-14 Score=123.00 Aligned_cols=105 Identities=18% Similarity=0.245 Sum_probs=89.2
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCC-CcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC------C
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLK-ATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL------G 201 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~-~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l------~ 201 (284)
.++.+|||+||| .|.+++.+++ ..+ +.+|+++|+|+.+++.|+++++..+ +..+++++++|+.+....+ +
T Consensus 68 ~~~~~vLdiG~G-~G~~~~~la~-~~~~~~~v~~vD~~~~~~~~a~~~~~~~g-~~~~i~~~~~d~~~~~~~~~~~~~~~ 144 (229)
T 2avd_A 68 IQAKKALDLGTF-TGYSALALAL-ALPADGRVVTCEVDAQPPELGRPLWRQAE-AEHKIDLRLKPALETLDELLAAGEAG 144 (229)
T ss_dssp TTCCEEEEECCT-TSHHHHHHHT-TSCTTCEEEEEESCSHHHHHHHHHHHHTT-CTTTEEEEESCHHHHHHHHHHTTCTT
T ss_pred cCCCEEEEEcCC-ccHHHHHHHH-hCCCCCEEEEEECCHHHHHHHHHHHHHCC-CCCeEEEEEcCHHHHHHHHHhcCCCC
Confidence 567899999999 9999999998 444 7899999999999999999988755 5678999999997754332 5
Q ss_pred CccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 202 EYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 202 ~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+||+|++++... ....+++.+.+.|+|||++++.+
T Consensus 145 ~~D~v~~d~~~~----~~~~~l~~~~~~L~pgG~lv~~~ 179 (229)
T 2avd_A 145 TFDVAVVDADKE----NCSAYYERCLQLLRPGGILAVLR 179 (229)
T ss_dssp CEEEEEECSCST----THHHHHHHHHHHEEEEEEEEEEC
T ss_pred CccEEEECCCHH----HHHHHHHHHHHHcCCCeEEEEEC
Confidence 899999987653 33689999999999999999976
No 42
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.54 E-value=3.8e-14 Score=127.08 Aligned_cols=113 Identities=16% Similarity=0.076 Sum_probs=92.4
Q ss_pred HHhhccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC--
Q 039591 123 LKENGVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL-- 200 (284)
Q Consensus 123 l~~~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l-- 200 (284)
+......++.+||||||| .|..+..+++...++.+|+++|+|+.+++.|+++++..++...+++|+++|+.+.....
T Consensus 29 l~~~~~~~~~~vLDiGcG-~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 107 (299)
T 3g5t_A 29 IDEYHDGERKLLVDVGCG-PGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGAD 107 (299)
T ss_dssp HHHHCCSCCSEEEEETCT-TTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTT
T ss_pred HHHHhcCCCCEEEEECCC-CCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccc
Confidence 333344678999999999 89999999962228899999999999999999998775123478999999998765443
Q ss_pred ----CCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEE
Q 039591 201 ----GEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLV 238 (284)
Q Consensus 201 ----~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~ 238 (284)
+.||+|++....++. +...+++++.+.|+|||.+++
T Consensus 108 ~~~~~~fD~V~~~~~l~~~--~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 108 SVDKQKIDMITAVECAHWF--DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp TTTSSCEEEEEEESCGGGS--CHHHHHHHHHHHEEEEEEEEE
T ss_pred cccCCCeeEEeHhhHHHHh--CHHHHHHHHHHhcCCCcEEEE
Confidence 689999998766544 678999999999999999988
No 43
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.54 E-value=2.3e-14 Score=121.30 Aligned_cols=105 Identities=22% Similarity=0.287 Sum_probs=88.9
Q ss_pred CCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEEcC
Q 039591 131 PKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFLAA 210 (284)
Q Consensus 131 ~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~~~ 210 (284)
+.+|||+||| .|..+..+++ . ++.+|+++|+|+.+++.|+++++..+ +..+++++++|+.+.....+.||+|++..
T Consensus 44 ~~~vLdiG~G-~G~~~~~l~~-~-~~~~v~~~D~s~~~~~~a~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 119 (219)
T 3dlc_A 44 AGTCIDIGSG-PGALSIALAK-Q-SDFSIRALDFSKHMNEIALKNIADAN-LNDRIQIVQGDVHNIPIEDNYADLIVSRG 119 (219)
T ss_dssp EEEEEEETCT-TSHHHHHHHH-H-SEEEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEECBTTBCSSCTTCEEEEEEES
T ss_pred CCEEEEECCC-CCHHHHHHHH-c-CCCeEEEEECCHHHHHHHHHHHHhcc-ccCceEEEEcCHHHCCCCcccccEEEECc
Confidence 3499999999 8999999998 3 78899999999999999999988755 55689999999987544447899999987
Q ss_pred cCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 211 LVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 211 ~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
...+. ++...+++++.+.|+|||++++..
T Consensus 120 ~l~~~-~~~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 120 SVFFW-EDVATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp CGGGC-SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hHhhc-cCHHHHHHHHHHhCCCCCEEEEEe
Confidence 55443 566889999999999999999875
No 44
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.54 E-value=4e-14 Score=121.92 Aligned_cols=105 Identities=17% Similarity=0.327 Sum_probs=88.9
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+|||+||| .|..+..+++ ..++.+|+++|+|+.+++.|+++.... .+++++++|+.+.... +.||+|++
T Consensus 43 ~~~~~vLDiG~G-~G~~~~~l~~-~~~~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~d~~~~~~~-~~fD~v~~ 115 (234)
T 3dtn_A 43 TENPDILDLGAG-TGLLSAFLME-KYPEATFTLVDMSEKMLEIAKNRFRGN----LKVKYIEADYSKYDFE-EKYDMVVS 115 (234)
T ss_dssp CSSCEEEEETCT-TSHHHHHHHH-HCTTCEEEEEESCHHHHHHHHHHTCSC----TTEEEEESCTTTCCCC-SCEEEEEE
T ss_pred CCCCeEEEecCC-CCHHHHHHHH-hCCCCeEEEEECCHHHHHHHHHhhccC----CCEEEEeCchhccCCC-CCceEEEE
Confidence 567899999999 8999999988 567899999999999999999987652 3899999999876544 78999998
Q ss_pred cCcC-CCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 209 AALV-GMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~-~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.... +...+++..+++++.+.|||||++++..
T Consensus 116 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 116 ALSIHHLEDEDKKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eCccccCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 8655 3444566689999999999999999865
No 45
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.54 E-value=4.5e-14 Score=123.40 Aligned_cols=147 Identities=17% Similarity=0.248 Sum_probs=108.6
Q ss_pred ccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEE
Q 039591 127 GVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCI 206 (284)
Q Consensus 127 ~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V 206 (284)
...++.+|||+||| .|..++.+++...++.+|+++|+|+.+++.|+++++..+ +..+++++++|+.+.. ..+.||+|
T Consensus 90 ~~~~~~~vldiG~G-~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~-~~~~~D~v 166 (255)
T 3mb5_A 90 GISPGDFIVEAGVG-SGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAG-FDDRVTIKLKDIYEGI-EEENVDHV 166 (255)
T ss_dssp TCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHT-CTTTEEEECSCGGGCC-CCCSEEEE
T ss_pred CCCCCCEEEEecCC-chHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcC-CCCceEEEECchhhcc-CCCCcCEE
Confidence 34788999999999 799999999833678999999999999999999988765 5567999999998642 23679999
Q ss_pred EEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEecc---------chhhhc--CCCCCCCC--CCCcEEEE-EEcCCCce
Q 039591 207 FLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRSAK---------GARAFL--YPVVERHD--LLDFEVLS-IFHPIDEV 272 (284)
Q Consensus 207 ~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~~---------g~~~~l--yp~v~~~~--l~gf~~~~-~~~p~~~v 272 (284)
+++... ...+++++.+.|+|||++++.... .++... |..++..+ ...|++.. ..+|....
T Consensus 167 ~~~~~~------~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g~~f~~~~~~e~~~r~~~~~~~~~rp~~~~ 240 (255)
T 3mb5_A 167 ILDLPQ------PERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFKDYFMKPRTINVLVFDQEVKKECMRPRTTA 240 (255)
T ss_dssp EECSSC------GGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTGGGBSCCEEECCCCCCEEEETTEEEECSCC
T ss_pred EECCCC------HHHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCccccEEEEEeeeeeEecCCccCCCccc
Confidence 997543 257899999999999999987521 112222 33333322 25666653 36776654
Q ss_pred e-eE--EEEEeec
Q 039591 273 I-NS--VILVRKP 282 (284)
Q Consensus 273 ~-ns--vi~~rk~ 282 (284)
+ ++ +++|||.
T Consensus 241 ~~htg~l~~ark~ 253 (255)
T 3mb5_A 241 LVHTGYITFARRI 253 (255)
T ss_dssp CCCSCEEEEEEBC
T ss_pred ccccEEEEEEEEe
Confidence 4 33 8889985
No 46
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.53 E-value=3.3e-14 Score=121.06 Aligned_cols=99 Identities=18% Similarity=0.247 Sum_probs=81.5
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhh---ccC-CCc
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVK---EKL-GEY 203 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~---~~l-~~f 203 (284)
..++.+|||+||| .|..+..+++ .+.+|+++|+|+.+++.|+++ .++++..+|+.+.. ... ++|
T Consensus 50 ~~~~~~vLdiG~G-~G~~~~~l~~---~~~~v~~vD~s~~~~~~a~~~--------~~~~~~~~~~~~~~~~~~~~~~~f 117 (227)
T 3e8s_A 50 GRQPERVLDLGCG-EGWLLRALAD---RGIEAVGVDGDRTLVDAARAA--------GAGEVHLASYAQLAEAKVPVGKDY 117 (227)
T ss_dssp HTCCSEEEEETCT-TCHHHHHHHT---TTCEEEEEESCHHHHHHHHHT--------CSSCEEECCHHHHHTTCSCCCCCE
T ss_pred cCCCCEEEEeCCC-CCHHHHHHHH---CCCEEEEEcCCHHHHHHHHHh--------cccccchhhHHhhcccccccCCCc
Confidence 3567999999999 8999999998 378999999999999999987 24678889988752 222 459
Q ss_pred cEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 204 DCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 204 D~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|+|++..... ..+...+++++.+.|+|||++++..
T Consensus 118 D~v~~~~~l~--~~~~~~~l~~~~~~L~pgG~l~~~~ 152 (227)
T 3e8s_A 118 DLICANFALL--HQDIIELLSAMRTLLVPGGALVIQT 152 (227)
T ss_dssp EEEEEESCCC--SSCCHHHHHHHHHTEEEEEEEEEEE
T ss_pred cEEEECchhh--hhhHHHHHHHHHHHhCCCeEEEEEe
Confidence 9999887654 2556799999999999999999876
No 47
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.52 E-value=3.6e-14 Score=123.25 Aligned_cols=105 Identities=25% Similarity=0.303 Sum_probs=88.1
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCC-CcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC-------
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLK-ATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL------- 200 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~-~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l------- 200 (284)
.++.+||||||| .|..++.+++ ..+ +.+|+++|+|+.+++.|+++++..+ +..+++++++|+.+....+
T Consensus 59 ~~~~~VLdiG~G-~G~~~~~la~-~~~~~~~v~~vD~~~~~~~~a~~~~~~~g-~~~~v~~~~~d~~~~~~~~~~~~~~~ 135 (239)
T 2hnk_A 59 SGAKRIIEIGTF-TGYSSLCFAS-ALPEDGKILCCDVSEEWTNVARKYWKENG-LENKIFLKLGSALETLQVLIDSKSAP 135 (239)
T ss_dssp HTCSEEEEECCT-TCHHHHHHHH-HSCTTCEEEEEESCHHHHHHHHHHHHHTT-CGGGEEEEESCHHHHHHHHHHCSSCC
T ss_pred hCcCEEEEEeCC-CCHHHHHHHH-hCCCCCEEEEEECCHHHHHHHHHHHHHcC-CCCCEEEEECCHHHHHHHHHhhcccc
Confidence 567899999999 8999999998 444 7899999999999999999988755 5567999999997643322
Q ss_pred ----------CCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 201 ----------GEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 201 ----------~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+.||+|+++... +....+++.+.+.|+|||++++.+
T Consensus 136 ~~~~~f~~~~~~fD~I~~~~~~----~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 136 SWASDFAFGPSSIDLFFLDADK----ENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp GGGTTTCCSTTCEEEEEECSCG----GGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cccccccCCCCCcCEEEEeCCH----HHHHHHHHHHHHHcCCCeEEEEEc
Confidence 679999998654 344688999999999999999976
No 48
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.52 E-value=1.5e-14 Score=131.31 Aligned_cols=144 Identities=13% Similarity=0.197 Sum_probs=103.6
Q ss_pred CCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC--CCccEEEE
Q 039591 131 PKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL--GEYDCIFL 208 (284)
Q Consensus 131 ~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l--~~fD~V~~ 208 (284)
+.+||+|||| .|..+..+++ +.++.+|+++|+|+.+++.|++++.... ..+++++.+|+.+..... ++||+|++
T Consensus 90 ~~rVLdIG~G-~G~la~~la~-~~p~~~v~~VEidp~vi~~Ar~~~~~~~--~~rv~v~~~Da~~~l~~~~~~~fDvIi~ 165 (317)
T 3gjy_A 90 KLRITHLGGG-ACTMARYFAD-VYPQSRNTVVELDAELARLSREWFDIPR--APRVKIRVDDARMVAESFTPASRDVIIR 165 (317)
T ss_dssp GCEEEEESCG-GGHHHHHHHH-HSTTCEEEEEESCHHHHHHHHHHSCCCC--TTTEEEEESCHHHHHHTCCTTCEEEEEE
T ss_pred CCEEEEEECC-cCHHHHHHHH-HCCCcEEEEEECCHHHHHHHHHhccccC--CCceEEEECcHHHHHhhccCCCCCEEEE
Confidence 3499999999 9999999998 5688899999999999999999976422 478999999998875443 68999999
Q ss_pred cCcCCCCHH---HHHHHHHHHHhccccCcEEEEEeccchhhhcCCCCCC--CCC-CCcEEEEEEc-----CCCceeeEEE
Q 039591 209 AALVGMSKE---EKMKIIRHIRKYMKDGGILLVRSAKGARAFLYPVVER--HDL-LDFEVLSIFH-----PIDEVINSVI 277 (284)
Q Consensus 209 ~~~~~~~~~---~k~~~l~~~~~~L~pGG~lv~~~~~g~~~~lyp~v~~--~~l-~gf~~~~~~~-----p~~~v~nsvi 277 (284)
+...+.... ...++++.+.++|+|||++++....... +..+.. ..+ .-|..+..++ +...--|.|+
T Consensus 166 D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~~~~---~~~~~~~~~tL~~vF~~v~~~~~~~~~~g~~~gN~Vl 242 (317)
T 3gjy_A 166 DVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCGDHSD---LRGAKSELAGMMEVFEHVAVIADPPMLKGRRYGNIIL 242 (317)
T ss_dssp CCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEECTT---CHHHHHHHHHHHHHCSEEEEEECHHHHTTSSCEEEEE
T ss_pred CCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEecCCcc---hHHHHHHHHHHHHHCCceEEEEecCCCCCCcCceEEE
Confidence 865432211 1268999999999999999987742211 000000 011 2355555543 1235669999
Q ss_pred EEee
Q 039591 278 LVRK 281 (284)
Q Consensus 278 ~~rk 281 (284)
+|.+
T Consensus 243 ~As~ 246 (317)
T 3gjy_A 243 MGSD 246 (317)
T ss_dssp EEES
T ss_pred EEEC
Confidence 9987
No 49
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.52 E-value=1.6e-13 Score=116.03 Aligned_cols=129 Identities=19% Similarity=0.196 Sum_probs=97.4
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+|||+||| .|..++.+++ .+..+|+++|+|+.+++.|++++...+ +. +++++++|+.+.. .+.||+|++
T Consensus 59 ~~~~~vLDiG~G-~G~~~~~l~~--~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~-~v~~~~~d~~~~~--~~~fD~i~~ 131 (205)
T 3grz_A 59 VKPLTVADVGTG-SGILAIAAHK--LGAKSVLATDISDESMTAAEENAALNG-IY-DIALQKTSLLADV--DGKFDLIVA 131 (205)
T ss_dssp SSCCEEEEETCT-TSHHHHHHHH--TTCSEEEEEESCHHHHHHHHHHHHHTT-CC-CCEEEESSTTTTC--CSCEEEEEE
T ss_pred cCCCEEEEECCC-CCHHHHHHHH--CCCCEEEEEECCHHHHHHHHHHHHHcC-CC-ceEEEeccccccC--CCCceEEEE
Confidence 578899999999 7999999887 356699999999999999999988755 33 3999999997643 278999999
Q ss_pred cCcCCCCHHHHHHHHHHHHhccccCcEEEEEec--cchhhhcCCCCCCCCCCCcEEEEEEcCCCce
Q 039591 209 AALVGMSKEEKMKIIRHIRKYMKDGGILLVRSA--KGARAFLYPVVERHDLLDFEVLSIFHPIDEV 272 (284)
Q Consensus 209 ~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~--~g~~~~lyp~v~~~~l~gf~~~~~~~p~~~v 272 (284)
+... .....+++++.+.|+|||++++... .....+. ....-.||+++......++.
T Consensus 132 ~~~~----~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~----~~~~~~Gf~~~~~~~~~~w~ 189 (205)
T 3grz_A 132 NILA----EILLDLIPQLDSHLNEDGQVIFSGIDYLQLPKIE----QALAENSFQIDLKMRAGRWI 189 (205)
T ss_dssp ESCH----HHHHHHGGGSGGGEEEEEEEEEEEEEGGGHHHHH----HHHHHTTEEEEEEEEETTEE
T ss_pred CCcH----HHHHHHHHHHHHhcCCCCEEEEEecCcccHHHHH----HHHHHcCCceEEeeccCCEE
Confidence 8654 4457889999999999999998641 1111110 00012688888776666665
No 50
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.52 E-value=6e-14 Score=122.93 Aligned_cols=107 Identities=17% Similarity=0.204 Sum_probs=87.5
Q ss_pred ccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEE
Q 039591 127 GVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCI 206 (284)
Q Consensus 127 ~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V 206 (284)
...++.+||||||| .|..+..+++ .+.+|+++|+|+.+++.|+++++..+ + .+++|+++|+.+.....+.||+|
T Consensus 34 ~~~~~~~vLDiGcG-~G~~~~~l~~---~~~~v~gvD~s~~~l~~a~~~~~~~~-~-~~v~~~~~d~~~l~~~~~~fD~V 107 (260)
T 1vl5_A 34 ALKGNEEVLDVATG-GGHVANAFAP---FVKKVVAFDLTEDILKVARAFIEGNG-H-QQVEYVQGDAEQMPFTDERFHIV 107 (260)
T ss_dssp TCCSCCEEEEETCT-TCHHHHHHGG---GSSEEEEEESCHHHHHHHHHHHHHTT-C-CSEEEEECCC-CCCSCTTCEEEE
T ss_pred CCCCCCEEEEEeCC-CCHHHHHHHH---hCCEEEEEeCCHHHHHHHHHHHHhcC-C-CceEEEEecHHhCCCCCCCEEEE
Confidence 34678999999999 8999999988 23599999999999999999987644 3 47999999998754334789999
Q ss_pred EEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 207 FLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 207 ~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
++.....+. ++...+++++.+.|||||++++..
T Consensus 108 ~~~~~l~~~-~d~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 108 TCRIAAHHF-PNPASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp EEESCGGGC-SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEhhhhHhc-CCHHHHHHHHHHHcCCCCEEEEEE
Confidence 988655433 456799999999999999999864
No 51
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.51 E-value=1.3e-13 Score=122.60 Aligned_cols=106 Identities=18% Similarity=0.234 Sum_probs=88.9
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhh-ccCCCccEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVK-EKLGEYDCIF 207 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~-~~l~~fD~V~ 207 (284)
.++.+||||||| .|..+..+++ .+.+|+++|+|+.+++.|++++...+ +..+++++++|+.+.. ...+.||+|+
T Consensus 67 ~~~~~vLDiGcG-~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~~fD~v~ 141 (285)
T 4htf_A 67 PQKLRVLDAGGG-EGQTAIKMAE---RGHQVILCDLSAQMIDRAKQAAEAKG-VSDNMQFIHCAAQDVASHLETPVDLIL 141 (285)
T ss_dssp SSCCEEEEETCT-TCHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHC-C-CGGGEEEEESCGGGTGGGCSSCEEEEE
T ss_pred CCCCEEEEeCCc-chHHHHHHHH---CCCEEEEEECCHHHHHHHHHHHHhcC-CCcceEEEEcCHHHhhhhcCCCceEEE
Confidence 457899999999 8999999998 37899999999999999999988754 5578999999998865 2337899999
Q ss_pred EcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 208 LAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 208 ~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+.....+. ++...+++++.+.|||||++++..
T Consensus 142 ~~~~l~~~-~~~~~~l~~~~~~LkpgG~l~~~~ 173 (285)
T 4htf_A 142 FHAVLEWV-ADPRSVLQTLWSVLRPGGVLSLMF 173 (285)
T ss_dssp EESCGGGC-SCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ECchhhcc-cCHHHHHHHHHHHcCCCeEEEEEE
Confidence 98765433 355789999999999999999866
No 52
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.51 E-value=1e-13 Score=120.84 Aligned_cols=103 Identities=17% Similarity=0.208 Sum_probs=85.7
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+|||+||| .|..+..+++ . ...+|+++|+|+.+++.|++... ..+++++++|+.+.....+.||+|++
T Consensus 43 ~~~~~vLD~GcG-~G~~~~~l~~-~-~~~~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~~d~~~~~~~~~~fD~v~~ 114 (253)
T 3g5l_A 43 FNQKTVLDLGCG-FGWHCIYAAE-H-GAKKVLGIDLSERMLTEAKRKTT-----SPVVCYEQKAIEDIAIEPDAYNVVLS 114 (253)
T ss_dssp CTTCEEEEETCT-TCHHHHHHHH-T-TCSEEEEEESCHHHHHHHHHHCC-----CTTEEEEECCGGGCCCCTTCEEEEEE
T ss_pred cCCCEEEEECCC-CCHHHHHHHH-c-CCCEEEEEECCHHHHHHHHHhhc-----cCCeEEEEcchhhCCCCCCCeEEEEE
Confidence 578899999999 8999999988 2 22399999999999999999865 26799999999875443478999999
Q ss_pred cCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 209 AALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
....... ++...+++++.+.|||||++++..
T Consensus 115 ~~~l~~~-~~~~~~l~~~~~~LkpgG~l~~~~ 145 (253)
T 3g5l_A 115 SLALHYI-ASFDDICKKVYINLKSSGSFIFSV 145 (253)
T ss_dssp ESCGGGC-SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhhhh-hhHHHHHHHHHHHcCCCcEEEEEe
Confidence 8755433 566899999999999999999863
No 53
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.51 E-value=3.9e-13 Score=123.72 Aligned_cols=146 Identities=18% Similarity=0.188 Sum_probs=108.6
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEE
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIF 207 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~ 207 (284)
..++.+||||||| .|..+..+++ ..|+.+++++|+ +.+++.|+++++..+ +..+++|+.+|+.+. ....+|+|+
T Consensus 188 ~~~~~~vLDvG~G-~G~~~~~l~~-~~p~~~~~~~D~-~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~--~~~~~D~v~ 261 (359)
T 1x19_A 188 LDGVKKMIDVGGG-IGDISAAMLK-HFPELDSTILNL-PGAIDLVNENAAEKG-VADRMRGIAVDIYKE--SYPEADAVL 261 (359)
T ss_dssp CTTCCEEEEESCT-TCHHHHHHHH-HCTTCEEEEEEC-GGGHHHHHHHHHHTT-CTTTEEEEECCTTTS--CCCCCSEEE
T ss_pred CCCCCEEEEECCc-ccHHHHHHHH-HCCCCeEEEEec-HHHHHHHHHHHHhcC-CCCCEEEEeCccccC--CCCCCCEEE
Confidence 3677899999999 8999999988 578899999999 999999999987744 556799999999864 334569999
Q ss_pred EcCcCC-CCHHHHHHHHHHHHhccccCcEEEEEecc---c----hhh-------hc-CCC----CCCCC---C---CCcE
Q 039591 208 LAALVG-MSKEEKMKIIRHIRKYMKDGGILLVRSAK---G----ARA-------FL-YPV----VERHD---L---LDFE 261 (284)
Q Consensus 208 ~~~~~~-~~~~~k~~~l~~~~~~L~pGG~lv~~~~~---g----~~~-------~l-yp~----v~~~~---l---~gf~ 261 (284)
+....+ +..++..++++++.+.|+|||++++.... . ... .. ... ....+ + .||+
T Consensus 262 ~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ll~~aGf~ 341 (359)
T 1x19_A 262 FCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYKEILESLGYK 341 (359)
T ss_dssp EESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHHHHHHHTCE
T ss_pred EechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHHHHHHHCCCc
Confidence 877553 44556789999999999999999775511 0 000 00 000 12222 1 5999
Q ss_pred EEEEEcCCCceeeEEEEEeec
Q 039591 262 VLSIFHPIDEVINSVILVRKP 282 (284)
Q Consensus 262 ~~~~~~p~~~v~nsvi~~rk~ 282 (284)
++.+.... ..++|.++||
T Consensus 342 ~v~~~~~~---~~~vi~a~kp 359 (359)
T 1x19_A 342 DVTMVRKY---DHLLVQAVKP 359 (359)
T ss_dssp EEEEEEET---TEEEEEEECC
T ss_pred eEEEEecC---CceEEEEeCC
Confidence 98765433 5789999997
No 54
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.51 E-value=1.6e-13 Score=120.10 Aligned_cols=109 Identities=16% Similarity=0.142 Sum_probs=90.9
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
+++.+||||||| .|+.++.+++ ..+..+|+++|+|+.+++.|+++++..+ +.++++++++|+.+...+-++||+|++
T Consensus 20 ~~g~~VlDIGtG-sG~l~i~la~-~~~~~~V~avDi~~~al~~A~~N~~~~g-l~~~I~v~~gD~l~~~~~~~~~D~Ivi 96 (244)
T 3gnl_A 20 TKNERIADIGSD-HAYLPCFAVK-NQTASFAIAGEVVDGPFQSAQKQVRSSG-LTEQIDVRKGNGLAVIEKKDAIDTIVI 96 (244)
T ss_dssp CSSEEEEEETCS-TTHHHHHHHH-TTSEEEEEEEESSHHHHHHHHHHHHHTT-CTTTEEEEECSGGGGCCGGGCCCEEEE
T ss_pred CCCCEEEEECCc-cHHHHHHHHH-hCCCCEEEEEECCHHHHHHHHHHHHHcC-CCceEEEEecchhhccCccccccEEEE
Confidence 577899999999 9999999998 4566789999999999999999998855 677899999999876543236999998
Q ss_pred cCcCCCCHHHHHHHHHHHHhccccCcEEEEEeccc
Q 039591 209 AALVGMSKEEKMKIIRHIRKYMKDGGILLVRSAKG 243 (284)
Q Consensus 209 ~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~~g 243 (284)
+... .+--.++++...+.|++++.+++..-.+
T Consensus 97 agmG---g~lI~~IL~~~~~~L~~~~~lIlq~~~~ 128 (244)
T 3gnl_A 97 AGMG---GTLIRTILEEGAAKLAGVTKLILQPNIA 128 (244)
T ss_dssp EEEC---HHHHHHHHHHTGGGGTTCCEEEEEESSC
T ss_pred eCCc---hHHHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence 6533 2445789999999999999999987433
No 55
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.51 E-value=9.5e-14 Score=121.87 Aligned_cols=99 Identities=12% Similarity=0.175 Sum_probs=82.7
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+||||||| .|..+..+++ .+.+|+++|+|+.+++.|+++. .+++++++|+.+... .+.||+|++
T Consensus 49 ~~~~~vLDiGcG-~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~-------~~~~~~~~d~~~~~~-~~~fD~v~~ 116 (263)
T 3pfg_A 49 PKAASLLDVACG-TGMHLRHLAD---SFGTVEGLELSADMLAIARRRN-------PDAVLHHGDMRDFSL-GRRFSAVTC 116 (263)
T ss_dssp TTCCEEEEETCT-TSHHHHHHTT---TSSEEEEEESCHHHHHHHHHHC-------TTSEEEECCTTTCCC-SCCEEEEEE
T ss_pred CCCCcEEEeCCc-CCHHHHHHHH---cCCeEEEEECCHHHHHHHHhhC-------CCCEEEECChHHCCc-cCCcCEEEE
Confidence 466899999999 8999999987 4679999999999999999873 268999999987543 378999998
Q ss_pred cC-cCC-CC-HHHHHHHHHHHHhccccCcEEEEE
Q 039591 209 AA-LVG-MS-KEEKMKIIRHIRKYMKDGGILLVR 239 (284)
Q Consensus 209 ~~-~~~-~~-~~~k~~~l~~~~~~L~pGG~lv~~ 239 (284)
.. ... .. .++...+++++.+.|+|||++++.
T Consensus 117 ~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 117 MFSSIGHLAGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp CTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred cCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 75 443 32 356789999999999999999985
No 56
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.51 E-value=8.2e-14 Score=120.66 Aligned_cols=107 Identities=17% Similarity=0.159 Sum_probs=85.7
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhh--ccCCCccE
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVK--EKLGEYDC 205 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~--~~l~~fD~ 205 (284)
..++.+||||||| .|..+..+++ .+..+|+++|+|+.+++.|+++.+..+ .+++++++|+.+.. ...+.||+
T Consensus 58 ~~~~~~vLDiGcG-tG~~~~~l~~--~~~~~v~gvD~s~~~l~~a~~~~~~~~---~~v~~~~~d~~~~~~~~~~~~fD~ 131 (236)
T 1zx0_A 58 SSKGGRVLEVGFG-MAIAASKVQE--APIDEHWIIECNDGVFQRLRDWAPRQT---HKVIPLKGLWEDVAPTLPDGHFDG 131 (236)
T ss_dssp TTTCEEEEEECCT-TSHHHHHHHT--SCEEEEEEEECCHHHHHHHHHHGGGCS---SEEEEEESCHHHHGGGSCTTCEEE
T ss_pred CCCCCeEEEEecc-CCHHHHHHHh--cCCCeEEEEcCCHHHHHHHHHHHHhcC---CCeEEEecCHHHhhcccCCCceEE
Confidence 4677899999999 8999999976 344589999999999999999887643 67999999998863 23378999
Q ss_pred EEEcCcC----CCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 206 IFLAALV----GMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 206 V~~~~~~----~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|+++... .....++..+++++.++|||||++++..
T Consensus 132 V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 132 ILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp EEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred EEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 9983221 1123556788999999999999999765
No 57
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.51 E-value=1.9e-13 Score=122.58 Aligned_cols=108 Identities=10% Similarity=0.036 Sum_probs=89.8
Q ss_pred hccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccE
Q 039591 126 NGVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDC 205 (284)
Q Consensus 126 ~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~ 205 (284)
....++.+||||||| .|..+..+++ .. +.+|+++|+|+.+++.|+++....+ +.++++++++|+.+. .+.||+
T Consensus 68 ~~~~~~~~vLDiGcG-~G~~~~~la~-~~-~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~---~~~fD~ 140 (302)
T 3hem_A 68 LNLEPGMTLLDIGCG-WGSTMRHAVA-EY-DVNVIGLTLSENQYAHDKAMFDEVD-SPRRKEVRIQGWEEF---DEPVDR 140 (302)
T ss_dssp TCCCTTCEEEEETCT-TSHHHHHHHH-HH-CCEEEEEECCHHHHHHHHHHHHHSC-CSSCEEEEECCGGGC---CCCCSE
T ss_pred cCCCCcCEEEEeecc-CcHHHHHHHH-hC-CCEEEEEECCHHHHHHHHHHHHhcC-CCCceEEEECCHHHc---CCCccE
Confidence 344788899999999 8999999998 22 4899999999999999999988755 567899999999875 378999
Q ss_pred EEEcCcC-CC-------CHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 206 IFLAALV-GM-------SKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 206 V~~~~~~-~~-------~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|++.... +. ..++...+++++.+.|||||++++..
T Consensus 141 v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 183 (302)
T 3hem_A 141 IVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT 183 (302)
T ss_dssp EEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEE
T ss_pred EEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEE
Confidence 9987644 22 12456799999999999999999876
No 58
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.51 E-value=2.7e-13 Score=117.98 Aligned_cols=104 Identities=21% Similarity=0.413 Sum_probs=86.3
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEE
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIF 207 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~ 207 (284)
..++.+|||+||| .|..+..+++ .+.+|+++|+|+.+++.|+++....+ .+++++++|+.+...+ ++||+|+
T Consensus 39 ~~~~~~vLDlGcG-~G~~~~~l~~---~~~~v~gvD~s~~~l~~a~~~~~~~~---~~v~~~~~d~~~~~~~-~~fD~v~ 110 (252)
T 1wzn_A 39 KREVRRVLDLACG-TGIPTLELAE---RGYEVVGLDLHEEMLRVARRKAKERN---LKIEFLQGDVLEIAFK-NEFDAVT 110 (252)
T ss_dssp SSCCCEEEEETCT-TCHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHHTT---CCCEEEESCGGGCCCC-SCEEEEE
T ss_pred ccCCCEEEEeCCC-CCHHHHHHHH---CCCeEEEEECCHHHHHHHHHHHHhcC---CceEEEECChhhcccC-CCccEEE
Confidence 3567899999999 8999999998 47899999999999999999987644 4799999999875332 6899999
Q ss_pred EcC--cCCCCHHHHHHHHHHHHhccccCcEEEEE
Q 039591 208 LAA--LVGMSKEEKMKIIRHIRKYMKDGGILLVR 239 (284)
Q Consensus 208 ~~~--~~~~~~~~k~~~l~~~~~~L~pGG~lv~~ 239 (284)
+.. ......++...+++++.+.|+|||.+++.
T Consensus 111 ~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 111 MFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp ECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 752 22344567889999999999999999875
No 59
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.51 E-value=2.2e-13 Score=119.83 Aligned_cols=135 Identities=19% Similarity=0.161 Sum_probs=101.6
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEE
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIF 207 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~ 207 (284)
..++.+|||+||| .|..++.+++ .+.+|+++|+|+.+++.|+++++..+ +. +++.++|+.+.. ..++||+|+
T Consensus 118 ~~~~~~VLDiGcG-~G~l~~~la~---~g~~v~gvDi~~~~v~~a~~n~~~~~-~~--v~~~~~d~~~~~-~~~~fD~Vv 189 (254)
T 2nxc_A 118 LRPGDKVLDLGTG-SGVLAIAAEK---LGGKALGVDIDPMVLPQAEANAKRNG-VR--PRFLEGSLEAAL-PFGPFDLLV 189 (254)
T ss_dssp CCTTCEEEEETCT-TSHHHHHHHH---TTCEEEEEESCGGGHHHHHHHHHHTT-CC--CEEEESCHHHHG-GGCCEEEEE
T ss_pred cCCCCEEEEecCC-CcHHHHHHHH---hCCeEEEEECCHHHHHHHHHHHHHcC-Cc--EEEEECChhhcC-cCCCCCEEE
Confidence 3678899999999 7999999888 34599999999999999999987744 32 899999998742 236899999
Q ss_pred EcCcCCCCHHHHHHHHHHHHhccccCcEEEEEeccc--hhhhcCCCCCCCCCCCcEEEEEEcCCCceeeEEEEEee
Q 039591 208 LAALVGMSKEEKMKIIRHIRKYMKDGGILLVRSAKG--ARAFLYPVVERHDLLDFEVLSIFHPIDEVINSVILVRK 281 (284)
Q Consensus 208 ~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~~g--~~~~lyp~v~~~~l~gf~~~~~~~p~~~v~nsvi~~rk 281 (284)
++... .....+++.+.+.|+|||++++..... ...+. ....-.||+++...+-.+|+ .+++||
T Consensus 190 ~n~~~----~~~~~~l~~~~~~LkpgG~lils~~~~~~~~~v~----~~l~~~Gf~~~~~~~~~~W~---~l~~~k 254 (254)
T 2nxc_A 190 ANLYA----ELHAALAPRYREALVPGGRALLTGILKDRAPLVR----EAMAGAGFRPLEEAAEGEWV---LLAYGR 254 (254)
T ss_dssp EECCH----HHHHHHHHHHHHHEEEEEEEEEEEEEGGGHHHHH----HHHHHTTCEEEEEEEETTEE---EEEEEC
T ss_pred ECCcH----HHHHHHHHHHHHHcCCCCEEEEEeeccCCHHHHH----HHHHHCCCEEEEEeccCCeE---EEEEEC
Confidence 87543 445789999999999999999865211 11000 00012699999887777777 666665
No 60
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.51 E-value=4.1e-13 Score=125.35 Aligned_cols=114 Identities=15% Similarity=0.176 Sum_probs=88.8
Q ss_pred HHHhhccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHh-------hccCC-CCCeEEEEcch
Q 039591 122 ILKENGVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVA-------TDFEF-EKRMKFLTGDI 193 (284)
Q Consensus 122 ~l~~~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~-------~~~~l-~~~v~~~~~D~ 193 (284)
.+......++++||||||| .|..++.+|+ ..+..+|+|||+++.+++.|+++.+ ..| + ..+++|+++|+
T Consensus 165 il~~l~l~~gd~VLDLGCG-tG~l~l~lA~-~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~G-l~~~rVefi~GD~ 241 (438)
T 3uwp_A 165 MIDEIKMTDDDLFVDLGSG-VGQVVLQVAA-ATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYG-KKHAEYTLERGDF 241 (438)
T ss_dssp HHHHHCCCTTCEEEEESCT-TSHHHHHHHH-HCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHT-BCCCEEEEEECCT
T ss_pred HHHhcCCCCCCEEEEeCCC-CCHHHHHHHH-HCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhC-CCCCCeEEEECcc
Confidence 3444455889999999999 9999999987 3444469999999999999998653 223 3 26899999999
Q ss_pred hhhhccC--CCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 194 LQVKEKL--GEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 194 ~~~~~~l--~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.+..... ..||+||++... +. ++....+.++.+.|||||+|++..
T Consensus 242 ~~lp~~d~~~~aDVVf~Nn~~-F~-pdl~~aL~Ei~RvLKPGGrIVssE 288 (438)
T 3uwp_A 242 LSEEWRERIANTSVIFVNNFA-FG-PEVDHQLKERFANMKEGGRIVSSK 288 (438)
T ss_dssp TSHHHHHHHHTCSEEEECCTT-CC-HHHHHHHHHHHTTSCTTCEEEESS
T ss_pred cCCccccccCCccEEEEcccc-cC-chHHHHHHHHHHcCCCCcEEEEee
Confidence 8764322 579999987654 23 667778889999999999999754
No 61
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.51 E-value=8.1e-14 Score=121.34 Aligned_cols=146 Identities=15% Similarity=0.200 Sum_probs=105.0
Q ss_pred hccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhc---cCCC
Q 039591 126 NGVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKE---KLGE 202 (284)
Q Consensus 126 ~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~---~l~~ 202 (284)
...++|++|||+||| .|.++..+|+...+.++|+++|+++++++.+++++++. .++..+.+|+.+... ..+.
T Consensus 73 l~ikpG~~VldlG~G-~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~----~ni~~V~~d~~~p~~~~~~~~~ 147 (233)
T 4df3_A 73 LPVKEGDRILYLGIA-SGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR----RNIFPILGDARFPEKYRHLVEG 147 (233)
T ss_dssp CCCCTTCEEEEETCT-TSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC----TTEEEEESCTTCGGGGTTTCCC
T ss_pred cCCCCCCEEEEecCc-CCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh----cCeeEEEEeccCccccccccce
Confidence 345899999999999 99999999996678899999999999999999987653 478999999875321 2278
Q ss_pred ccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe-ccchhhhcCCCCCC----CCC--CCcEEEEEE--cCCCcee
Q 039591 203 YDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS-AKGARAFLYPVVER----HDL--LDFEVLSIF--HPIDEVI 273 (284)
Q Consensus 203 fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~-~~g~~~~lyp~v~~----~~l--~gf~~~~~~--~p~~~v~ 273 (284)
+|+||.+... ++++..++.++.+.|||||++++.. +.......-|.... ..+ .||+++... .|..+ -
T Consensus 148 vDvVf~d~~~---~~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF~l~e~i~L~pf~~-~ 223 (233)
T 4df3_A 148 VDGLYADVAQ---PEQAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLEIKDVVHLDPFDR-D 223 (233)
T ss_dssp EEEEEECCCC---TTHHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTCCEEEEEECTTTST-T
T ss_pred EEEEEEeccC---ChhHHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCCEEEEEEccCCCCC-c
Confidence 9999987543 3577889999999999999998753 22211111111000 122 699998764 45433 2
Q ss_pred eEEEEEe
Q 039591 274 NSVILVR 280 (284)
Q Consensus 274 nsvi~~r 280 (284)
.-+||++
T Consensus 224 H~lv~~~ 230 (233)
T 4df3_A 224 HAMIYAV 230 (233)
T ss_dssp EEEEEEC
T ss_pred eEEEEEE
Confidence 3466665
No 62
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.50 E-value=4.9e-13 Score=114.87 Aligned_cols=110 Identities=16% Similarity=0.200 Sum_probs=85.2
Q ss_pred ccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhc-cCCCccE
Q 039591 127 GVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKE-KLGEYDC 205 (284)
Q Consensus 127 ~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~-~l~~fD~ 205 (284)
...++.+|||+|||+.|..++.+++ .. +.+|+++|+|+.+++.|+++++..+ + +++++++|+..... ..+.||+
T Consensus 52 ~~~~~~~vLDlG~G~~G~~~~~la~-~~-~~~v~~vD~s~~~~~~a~~~~~~~~-~--~v~~~~~d~~~~~~~~~~~fD~ 126 (230)
T 3evz_A 52 FLRGGEVALEIGTGHTAMMALMAEK-FF-NCKVTATEVDEEFFEYARRNIERNN-S--NVRLVKSNGGIIKGVVEGTFDV 126 (230)
T ss_dssp TCCSSCEEEEECCTTTCHHHHHHHH-HH-CCEEEEEECCHHHHHHHHHHHHHTT-C--CCEEEECSSCSSTTTCCSCEEE
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHH-hc-CCEEEEEECCHHHHHHHHHHHHHhC-C--CcEEEeCCchhhhhcccCceeE
Confidence 3467899999999966888888888 22 7899999999999999999988755 3 89999999643211 1278999
Q ss_pred EEEcCcCCCCH------------------HHHHHHHHHHHhccccCcEEEEEec
Q 039591 206 IFLAALVGMSK------------------EEKMKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 206 V~~~~~~~~~~------------------~~k~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
|+++.+..... +....+++++.+.|+|||++++...
T Consensus 127 I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 180 (230)
T 3evz_A 127 IFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLP 180 (230)
T ss_dssp EEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred EEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEec
Confidence 99986542211 1137899999999999999998653
No 63
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.50 E-value=8.9e-14 Score=121.47 Aligned_cols=107 Identities=24% Similarity=0.365 Sum_probs=90.0
Q ss_pred ccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEE
Q 039591 127 GVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCI 206 (284)
Q Consensus 127 ~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V 206 (284)
...++.+||||||| .|..+..+++. . +.+|+++|+|+.+++.|+++.... .+++++++|+.+.....+.||+|
T Consensus 52 ~~~~~~~vLdiG~G-~G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~d~~~~~~~~~~fD~v 124 (266)
T 3ujc_A 52 ELNENSKVLDIGSG-LGGGCMYINEK-Y-GAHTHGIDICSNIVNMANERVSGN----NKIIFEANDILTKEFPENNFDLI 124 (266)
T ss_dssp CCCTTCEEEEETCT-TSHHHHHHHHH-H-CCEEEEEESCHHHHHHHHHTCCSC----TTEEEEECCTTTCCCCTTCEEEE
T ss_pred CCCCCCEEEEECCC-CCHHHHHHHHH-c-CCEEEEEeCCHHHHHHHHHHhhcC----CCeEEEECccccCCCCCCcEEEE
Confidence 34678899999999 89999999983 3 789999999999999999986542 68999999998754444789999
Q ss_pred EEcCcC-CCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 207 FLAALV-GMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 207 ~~~~~~-~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
++.... +...++...+++++.+.|||||++++..
T Consensus 125 ~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 125 YSRDAILALSLENKNKLFQKCYKWLKPTGTLLITD 159 (266)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 987654 4445788999999999999999999876
No 64
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.50 E-value=1.4e-13 Score=113.55 Aligned_cols=106 Identities=14% Similarity=0.163 Sum_probs=86.2
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC-CCccEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL-GEYDCIF 207 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l-~~fD~V~ 207 (284)
.++.+|||+||| .|..++.+++ .+..+|+++|+|+.+++.|+++++..+ +..+++++++|+.+..... +.||+|+
T Consensus 30 ~~~~~vLDlGcG-~G~~~~~l~~--~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~fD~i~ 105 (177)
T 2esr_A 30 FNGGRVLDLFAG-SGGLAIEAVS--RGMSAAVLVEKNRKAQAIIQDNIIMTK-AENRFTLLKMEAERAIDCLTGRFDLVF 105 (177)
T ss_dssp CCSCEEEEETCT-TCHHHHHHHH--TTCCEEEEECCCHHHHHHHHHHHHTTT-CGGGEEEECSCHHHHHHHBCSCEEEEE
T ss_pred cCCCeEEEeCCC-CCHHHHHHHH--cCCCEEEEEECCHHHHHHHHHHHHHcC-CCCceEEEECcHHHhHHhhcCCCCEEE
Confidence 567899999999 8999999988 255799999999999999999988754 5567999999998753322 6799999
Q ss_pred EcCcCCCCHHHHHHHHHHHH--hccccCcEEEEEe
Q 039591 208 LAALVGMSKEEKMKIIRHIR--KYMKDGGILLVRS 240 (284)
Q Consensus 208 ~~~~~~~~~~~k~~~l~~~~--~~L~pGG~lv~~~ 240 (284)
++.... .....++++.+. +.|+|||++++..
T Consensus 106 ~~~~~~--~~~~~~~~~~l~~~~~L~~gG~l~~~~ 138 (177)
T 2esr_A 106 LDPPYA--KETIVATIEALAAKNLLSEQVMVVCET 138 (177)
T ss_dssp ECCSSH--HHHHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred ECCCCC--cchHHHHHHHHHhCCCcCCCcEEEEEE
Confidence 986542 234567777776 9999999999876
No 65
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.50 E-value=1.4e-13 Score=124.35 Aligned_cols=107 Identities=8% Similarity=0.122 Sum_probs=89.7
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEE
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIF 207 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~ 207 (284)
..++.+|||+||| .|..+..++++ .+.+|+++|+++.+++.|+++++..+ +..+++|+++|+.+.....+.||+|+
T Consensus 115 ~~~~~~vLDiGcG-~G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~fD~V~ 190 (312)
T 3vc1_A 115 AGPDDTLVDAGCG-RGGSMVMAHRR--FGSRVEGVTLSAAQADFGNRRARELR-IDDHVRSRVCNMLDTPFDKGAVTASW 190 (312)
T ss_dssp CCTTCEEEEESCT-TSHHHHHHHHH--HCCEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEECCTTSCCCCTTCEEEEE
T ss_pred CCCCCEEEEecCC-CCHHHHHHHHH--cCCEEEEEeCCHHHHHHHHHHHHHcC-CCCceEEEECChhcCCCCCCCEeEEE
Confidence 3678899999999 89999999882 27899999999999999999988755 56789999999987543347899999
Q ss_pred EcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 208 LAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 208 ~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+....... +...+++++.+.|||||++++..
T Consensus 191 ~~~~l~~~--~~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 191 NNESTMYV--DLHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp EESCGGGS--CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCchhhC--CHHHHHHHHHHHcCCCcEEEEEE
Confidence 87655333 27899999999999999999866
No 66
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.50 E-value=2.3e-13 Score=116.05 Aligned_cols=108 Identities=19% Similarity=0.158 Sum_probs=88.2
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhc--cCCCccEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKE--KLGEYDCI 206 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~--~l~~fD~V 206 (284)
.++.+||||||| .|..++.+++ ..++.+|+++|+|+.+++.|++++...+ + .+++++++|+.+... ..+.||+|
T Consensus 40 ~~~~~vLDiGcG-~G~~~~~la~-~~p~~~v~gvD~s~~~l~~a~~~~~~~~-~-~~v~~~~~d~~~~~~~~~~~~~D~i 115 (214)
T 1yzh_A 40 NDNPIHVEVGSG-KGAFVSGMAK-QNPDINYIGIDIQKSVLSYALDKVLEVG-V-PNIKLLWVDGSDLTDYFEDGEIDRL 115 (214)
T ss_dssp SCCCEEEEESCT-TSHHHHHHHH-HCTTSEEEEEESCHHHHHHHHHHHHHHC-C-SSEEEEECCSSCGGGTSCTTCCSEE
T ss_pred CCCCeEEEEccC-cCHHHHHHHH-HCCCCCEEEEEcCHHHHHHHHHHHHHcC-C-CCEEEEeCCHHHHHhhcCCCCCCEE
Confidence 467899999999 9999999998 5678999999999999999999988755 4 689999999987542 23679999
Q ss_pred EEcCcCCCCHH-------HHHHHHHHHHhccccCcEEEEEe
Q 039591 207 FLAALVGMSKE-------EKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 207 ~~~~~~~~~~~-------~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+++....+... ....+++.+.+.|+|||.+++..
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 116 YLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp EEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEe
Confidence 98865332210 11579999999999999999876
No 67
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.50 E-value=1e-13 Score=119.47 Aligned_cols=108 Identities=13% Similarity=0.173 Sum_probs=87.1
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhc---cCCCccE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKE---KLGEYDC 205 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~---~l~~fD~ 205 (284)
.++.+||||||| .|..++.+|+ ..++..|+|+|+|+.+++.|+++++..+ + .+++|+++|+.+... +.+.||.
T Consensus 33 ~~~~~vLDiGcG-~G~~~~~lA~-~~p~~~v~giD~s~~~l~~a~~~~~~~~-l-~nv~~~~~Da~~~l~~~~~~~~~d~ 108 (218)
T 3dxy_A 33 REAPVTLEIGFG-MGASLVAMAK-DRPEQDFLGIEVHSPGVGACLASAHEEG-L-SNLRVMCHDAVEVLHKMIPDNSLRM 108 (218)
T ss_dssp SCCCEEEEESCT-TCHHHHHHHH-HCTTSEEEEECSCHHHHHHHHHHHHHTT-C-SSEEEECSCHHHHHHHHSCTTCEEE
T ss_pred CCCCeEEEEeee-ChHHHHHHHH-HCCCCeEEEEEecHHHHHHHHHHHHHhC-C-CcEEEEECCHHHHHHHHcCCCChhe
Confidence 467799999999 9999999998 5788999999999999999999987755 3 579999999988532 3378999
Q ss_pred EEEcCcCCCCHH--HH-----HHHHHHHHhccccCcEEEEEe
Q 039591 206 IFLAALVGMSKE--EK-----MKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 206 V~~~~~~~~~~~--~k-----~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|++.....+... .+ ..+++.+.+.|||||++++.+
T Consensus 109 v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 109 VQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp EEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence 998743322211 11 269999999999999999876
No 68
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.50 E-value=4.5e-13 Score=111.06 Aligned_cols=108 Identities=19% Similarity=0.281 Sum_probs=90.2
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCC-CeEEEEcchhhhhccCCCccEE
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEK-RMKFLTGDILQVKEKLGEYDCI 206 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~-~v~~~~~D~~~~~~~l~~fD~V 206 (284)
..++.+|||+||| .|..+..+++ . +.+|+++|+|+.+++.|++++...+ +.. +++++++|+.+.. ..+.||+|
T Consensus 50 ~~~~~~vLdiG~G-~G~~~~~~~~-~--~~~v~~~D~~~~~~~~a~~~~~~~~-~~~~~~~~~~~d~~~~~-~~~~~D~v 123 (194)
T 1dus_A 50 VDKDDDILDLGCG-YGVIGIALAD-E--VKSTTMADINRRAIKLAKENIKLNN-LDNYDIRVVHSDLYENV-KDRKYNKI 123 (194)
T ss_dssp CCTTCEEEEETCT-TSHHHHHHGG-G--SSEEEEEESCHHHHHHHHHHHHHTT-CTTSCEEEEECSTTTTC-TTSCEEEE
T ss_pred cCCCCeEEEeCCC-CCHHHHHHHH-c--CCeEEEEECCHHHHHHHHHHHHHcC-CCccceEEEECchhccc-ccCCceEE
Confidence 3678899999999 8999999998 2 7899999999999999999987654 332 4999999998643 23689999
Q ss_pred EEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEec
Q 039591 207 FLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 207 ~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
+++...+....+...+++++.+.|+|||.+++...
T Consensus 124 ~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 158 (194)
T 1dus_A 124 ITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQ 158 (194)
T ss_dssp EECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EECCCcccchhHHHHHHHHHHHHcCCCCEEEEEEC
Confidence 99876654456778999999999999999998774
No 69
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.49 E-value=1.5e-13 Score=117.05 Aligned_cols=101 Identities=15% Similarity=0.183 Sum_probs=85.3
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+|||+||| .|..+..+++ .+.+|+++|+|+.+++.|++... .+++++++|+.+.... +.||+|++
T Consensus 44 ~~~~~vLDiGcG-~G~~~~~l~~---~~~~v~~vD~s~~~~~~a~~~~~------~~~~~~~~d~~~~~~~-~~fD~v~~ 112 (220)
T 3hnr_A 44 KSFGNVLEFGVG-TGNLTNKLLL---AGRTVYGIEPSREMRMIAKEKLP------KEFSITEGDFLSFEVP-TSIDTIVS 112 (220)
T ss_dssp TCCSEEEEECCT-TSHHHHHHHH---TTCEEEEECSCHHHHHHHHHHSC------TTCCEESCCSSSCCCC-SCCSEEEE
T ss_pred cCCCeEEEeCCC-CCHHHHHHHh---CCCeEEEEeCCHHHHHHHHHhCC------CceEEEeCChhhcCCC-CCeEEEEE
Confidence 578899999999 8999999998 37899999999999999998753 4689999999876555 89999999
Q ss_pred cCcC-CCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 209 AALV-GMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~-~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.... +....++..+++++.+.|||||.+++..
T Consensus 113 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 145 (220)
T 3hnr_A 113 TYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFAD 145 (220)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CcchhcCChHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 8755 3444455669999999999999999875
No 70
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.49 E-value=2.8e-13 Score=113.95 Aligned_cols=103 Identities=10% Similarity=0.185 Sum_probs=86.6
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++ +|||+||| .|..+..+++ .+.+|+++|+|+.+++.|+++....+ .+++++++|+.+.....+.||+|++
T Consensus 29 ~~~-~vLdiGcG-~G~~~~~l~~---~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~d~~~~~~~~~~fD~v~~ 100 (202)
T 2kw5_A 29 PQG-KILCLAEG-EGRNACFLAS---LGYEVTAVDQSSVGLAKAKQLAQEKG---VKITTVQSNLADFDIVADAWEGIVS 100 (202)
T ss_dssp CSS-EEEECCCS-CTHHHHHHHT---TTCEEEEECSSHHHHHHHHHHHHHHT---CCEEEECCBTTTBSCCTTTCSEEEE
T ss_pred CCC-CEEEECCC-CCHhHHHHHh---CCCeEEEEECCHHHHHHHHHHHHhcC---CceEEEEcChhhcCCCcCCccEEEE
Confidence 345 99999999 8999999987 36799999999999999999987644 3799999999875433378999998
Q ss_pred cCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 209 AALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
. ......++...+++++.+.|+|||++++..
T Consensus 101 ~-~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 131 (202)
T 2kw5_A 101 I-FCHLPSSLRQQLYPKVYQGLKPGGVFILEG 131 (202)
T ss_dssp E-CCCCCHHHHHHHHHHHHTTCCSSEEEEEEE
T ss_pred E-hhcCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 5 344456788999999999999999999876
No 71
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.49 E-value=1.4e-13 Score=119.50 Aligned_cols=107 Identities=15% Similarity=0.179 Sum_probs=88.6
Q ss_pred ccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEE
Q 039591 127 GVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCI 206 (284)
Q Consensus 127 ~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V 206 (284)
...++.+||||||| .|..+..+++ .+.+|+++|+|+.+++.|++++...+ + .+++++++|+.+.....+.||+|
T Consensus 18 ~~~~~~~vLDiGcG-~G~~~~~l~~---~~~~v~~vD~s~~~~~~a~~~~~~~~-~-~~v~~~~~d~~~~~~~~~~fD~v 91 (239)
T 1xxl_A 18 ECRAEHRVLDIGAG-AGHTALAFSP---YVQECIGVDATKEMVEVASSFAQEKG-V-ENVRFQQGTAESLPFPDDSFDII 91 (239)
T ss_dssp TCCTTCEEEEESCT-TSHHHHHHGG---GSSEEEEEESCHHHHHHHHHHHHHHT-C-CSEEEEECBTTBCCSCTTCEEEE
T ss_pred CcCCCCEEEEEccC-cCHHHHHHHH---hCCEEEEEECCHHHHHHHHHHHHHcC-C-CCeEEEecccccCCCCCCcEEEE
Confidence 44788999999999 8999999987 34699999999999999999987654 3 57999999998754334789999
Q ss_pred EEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 207 FLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 207 ~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
++.....+. .+...+++++.+.|||||++++..
T Consensus 92 ~~~~~l~~~-~~~~~~l~~~~~~LkpgG~l~~~~ 124 (239)
T 1xxl_A 92 TCRYAAHHF-SDVRKAVREVARVLKQDGRFLLVD 124 (239)
T ss_dssp EEESCGGGC-SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCchhhc-cCHHHHHHHHHHHcCCCcEEEEEE
Confidence 988655333 356789999999999999999865
No 72
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.49 E-value=1.9e-13 Score=121.46 Aligned_cols=107 Identities=14% Similarity=0.169 Sum_probs=88.5
Q ss_pred ccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEE
Q 039591 127 GVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCI 206 (284)
Q Consensus 127 ~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V 206 (284)
...++.+||||||| .|..+..+++. .+.+|+++|+|+.+++.|++.+...+ +..+++++.+|+.+.. +.||+|
T Consensus 61 ~~~~~~~vLDiGcG-~G~~~~~l~~~--~~~~v~gvd~s~~~~~~a~~~~~~~~-~~~~~~~~~~d~~~~~---~~fD~v 133 (287)
T 1kpg_A 61 GLQPGMTLLDVGCG-WGATMMRAVEK--YDVNVVGLTLSKNQANHVQQLVANSE-NLRSKRVLLAGWEQFD---EPVDRI 133 (287)
T ss_dssp TCCTTCEEEEETCT-TSHHHHHHHHH--HCCEEEEEESCHHHHHHHHHHHHTCC-CCSCEEEEESCGGGCC---CCCSEE
T ss_pred CCCCcCEEEEECCc-ccHHHHHHHHH--cCCEEEEEECCHHHHHHHHHHHHhcC-CCCCeEEEECChhhCC---CCeeEE
Confidence 34678899999999 78888888852 35699999999999999999987754 5578999999997643 789999
Q ss_pred EEcCcC-CCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 207 FLAALV-GMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 207 ~~~~~~-~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
++.... +...++...+++++.+.|||||++++..
T Consensus 134 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 134 VSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp EEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 987644 3333567899999999999999999866
No 73
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.49 E-value=1.5e-13 Score=116.62 Aligned_cols=105 Identities=11% Similarity=0.148 Sum_probs=84.8
Q ss_pred CCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCC-CCeEEEEcchhhhhcc--CCC-ccE
Q 039591 130 QPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFE-KRMKFLTGDILQVKEK--LGE-YDC 205 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~-~~v~~~~~D~~~~~~~--l~~-fD~ 205 (284)
++.+|||+||| .|..++.+++ ....+|+++|+|+.+++.|+++++..+ +. .+++++++|+.+.... .+. ||+
T Consensus 53 ~~~~vLDlGcG-tG~~~~~~~~--~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~~~~v~~~~~d~~~~~~~~~~~~~fD~ 128 (201)
T 2ift_A 53 HQSECLDGFAG-SGSLGFEALS--RQAKKVTFLELDKTVANQLKKNLQTLK-CSSEQAEVINQSSLDFLKQPQNQPHFDV 128 (201)
T ss_dssp TTCEEEETTCT-TCHHHHHHHH--TTCSEEEEECSCHHHHHHHHHHHHHTT-CCTTTEEEECSCHHHHTTSCCSSCCEEE
T ss_pred CCCeEEEcCCc-cCHHHHHHHH--ccCCEEEEEECCHHHHHHHHHHHHHhC-CCccceEEEECCHHHHHHhhccCCCCCE
Confidence 67899999999 8888887666 234689999999999999999988754 43 5899999999876543 267 999
Q ss_pred EEEcCcCCCCHHHHHHHHHHH--HhccccCcEEEEEe
Q 039591 206 IFLAALVGMSKEEKMKIIRHI--RKYMKDGGILLVRS 240 (284)
Q Consensus 206 V~~~~~~~~~~~~k~~~l~~~--~~~L~pGG~lv~~~ 240 (284)
|+++.... ..+...+++.+ .++|+|||++++..
T Consensus 129 I~~~~~~~--~~~~~~~l~~~~~~~~LkpgG~l~i~~ 163 (201)
T 2ift_A 129 VFLDPPFH--FNLAEQAISLLCENNWLKPNALIYVET 163 (201)
T ss_dssp EEECCCSS--SCHHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred EEECCCCC--CccHHHHHHHHHhcCccCCCcEEEEEE
Confidence 99987743 24556788888 66899999999876
No 74
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.49 E-value=1.2e-13 Score=123.25 Aligned_cols=108 Identities=15% Similarity=0.232 Sum_probs=89.8
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEE
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIF 207 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~ 207 (284)
..++.+||||||| .|..+..+++. .+.+|+++|+|+.+++.|+++.+..+ +..+++++++|+.+.....+.||+|+
T Consensus 80 ~~~~~~vLDiGcG-~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~fD~v~ 155 (297)
T 2o57_A 80 LQRQAKGLDLGAG-YGGAARFLVRK--FGVSIDCLNIAPVQNKRNEEYNNQAG-LADNITVKYGSFLEIPCEDNSYDFIW 155 (297)
T ss_dssp CCTTCEEEEETCT-TSHHHHHHHHH--HCCEEEEEESCHHHHHHHHHHHHHHT-CTTTEEEEECCTTSCSSCTTCEEEEE
T ss_pred CCCCCEEEEeCCC-CCHHHHHHHHH--hCCEEEEEeCCHHHHHHHHHHHHhcC-CCcceEEEEcCcccCCCCCCCEeEEE
Confidence 4678899999999 89999998882 26799999999999999999987655 56789999999987544447899999
Q ss_pred EcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 208 LAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 208 ~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+.....+. .+...+++++.+.|||||++++..
T Consensus 156 ~~~~l~~~-~~~~~~l~~~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 156 SQDAFLHS-PDKLKVFQECARVLKPRGVMAITD 187 (297)
T ss_dssp EESCGGGC-SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ecchhhhc-CCHHHHHHHHHHHcCCCeEEEEEE
Confidence 87654333 346899999999999999999876
No 75
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.49 E-value=3.7e-13 Score=111.63 Aligned_cols=141 Identities=14% Similarity=0.181 Sum_probs=102.4
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEE
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIF 207 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~ 207 (284)
..++.+|||+||| .|..+..+++ .+.+|+++|+|+.+++.|+++. .+++++++|+.+.....+.||+|+
T Consensus 44 ~~~~~~vLdiG~G-~G~~~~~l~~---~~~~v~~~D~~~~~~~~a~~~~-------~~~~~~~~d~~~~~~~~~~~D~i~ 112 (195)
T 3cgg_A 44 APRGAKILDAGCG-QGRIGGYLSK---QGHDVLGTDLDPILIDYAKQDF-------PEARWVVGDLSVDQISETDFDLIV 112 (195)
T ss_dssp SCTTCEEEEETCT-TTHHHHHHHH---TTCEEEEEESCHHHHHHHHHHC-------TTSEEEECCTTTSCCCCCCEEEEE
T ss_pred ccCCCeEEEECCC-CCHHHHHHHH---CCCcEEEEcCCHHHHHHHHHhC-------CCCcEEEcccccCCCCCCceeEEE
Confidence 4678899999999 8999999998 3789999999999999999874 348899999987543336899999
Q ss_pred Ec-CcC-CCCHHHHHHHHHHHHhccccCcEEEEEeccchhhhcCCCCCCCC---CCCcEEEEEEcCCC------ceeeEE
Q 039591 208 LA-ALV-GMSKEEKMKIIRHIRKYMKDGGILLVRSAKGARAFLYPVVERHD---LLDFEVLSIFHPID------EVINSV 276 (284)
Q Consensus 208 ~~-~~~-~~~~~~k~~~l~~~~~~L~pGG~lv~~~~~g~~~~lyp~v~~~~---l~gf~~~~~~~p~~------~v~nsv 276 (284)
+. ... ....++...+++.+.+.|+|||++++....... |..-+... -.||++........ ..-..+
T Consensus 113 ~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~---~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~~~~ 189 (195)
T 3cgg_A 113 SAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGAGRG---WVFGDFLEVAERVGLELENAFESWDLKPFVQGSEFLV 189 (195)
T ss_dssp ECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETTSS---CCHHHHHHHHHHHTEEEEEEESSTTCCBCCTTCSEEE
T ss_pred ECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCCCC---cCHHHHHHHHHHcCCEEeeeecccccCcCCCCCcEEE
Confidence 97 333 344567789999999999999999986532210 10000001 15899987754321 233457
Q ss_pred EEEeec
Q 039591 277 ILVRKP 282 (284)
Q Consensus 277 i~~rk~ 282 (284)
+++||+
T Consensus 190 ~v~~k~ 195 (195)
T 3cgg_A 190 AVFTKK 195 (195)
T ss_dssp EEEEEC
T ss_pred EEEecC
Confidence 888885
No 76
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.49 E-value=3.5e-13 Score=118.57 Aligned_cols=107 Identities=16% Similarity=0.195 Sum_probs=86.8
Q ss_pred CCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhcc--CCCccEEE
Q 039591 130 QPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEK--LGEYDCIF 207 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~--l~~fD~V~ 207 (284)
++.+|||+||| .|..++.+++ . ...+|+++|+++.+++.|+++++..+ +.++++++++|+.+.... .+.||+|+
T Consensus 49 ~~~~vLDlG~G-~G~~~~~la~-~-~~~~v~gvDi~~~~~~~a~~n~~~~~-~~~~v~~~~~D~~~~~~~~~~~~fD~Ii 124 (259)
T 3lpm_A 49 RKGKIIDLCSG-NGIIPLLLST-R-TKAKIVGVEIQERLADMAKRSVAYNQ-LEDQIEIIEYDLKKITDLIPKERADIVT 124 (259)
T ss_dssp SCCEEEETTCT-TTHHHHHHHT-T-CCCEEEEECCSHHHHHHHHHHHHHTT-CTTTEEEECSCGGGGGGTSCTTCEEEEE
T ss_pred CCCEEEEcCCc-hhHHHHHHHH-h-cCCcEEEEECCHHHHHHHHHHHHHCC-CcccEEEEECcHHHhhhhhccCCccEEE
Confidence 78999999999 8999999998 3 33499999999999999999998755 667899999999986543 37899999
Q ss_pred EcCcCCCC-------------------HHHHHHHHHHHHhccccCcEEEEEe
Q 039591 208 LAALVGMS-------------------KEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 208 ~~~~~~~~-------------------~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
++.+.... ..+...+++.+.+.|+|||++++..
T Consensus 125 ~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 176 (259)
T 3lpm_A 125 CNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVH 176 (259)
T ss_dssp ECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEE
Confidence 98654111 0234679999999999999999854
No 77
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.49 E-value=3.4e-13 Score=114.63 Aligned_cols=103 Identities=17% Similarity=0.158 Sum_probs=86.1
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+|||+||| .|..+..+++ .+.+|+++|+|+.+++.|+++.... .+++++++|+.+.. ..+.||+|++
T Consensus 50 ~~~~~vLDiGcG-~G~~~~~l~~---~~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~d~~~~~-~~~~fD~v~~ 120 (216)
T 3ofk_A 50 GAVSNGLEIGCA-AGAFTEKLAP---HCKRLTVIDVMPRAIGRACQRTKRW----SHISWAATDILQFS-TAELFDLIVV 120 (216)
T ss_dssp SSEEEEEEECCT-TSHHHHHHGG---GEEEEEEEESCHHHHHHHHHHTTTC----SSEEEEECCTTTCC-CSCCEEEEEE
T ss_pred CCCCcEEEEcCC-CCHHHHHHHH---cCCEEEEEECCHHHHHHHHHhcccC----CCeEEEEcchhhCC-CCCCccEEEE
Confidence 567899999999 8999999988 3579999999999999999987652 37999999998765 3478999999
Q ss_pred cCcCCC-C-HHHHHHHHHHHHhccccCcEEEEEe
Q 039591 209 AALVGM-S-KEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~~~-~-~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.....+ . .+....+++++.+.|||||++++..
T Consensus 121 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 121 AEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp ESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 865532 2 3455789999999999999999866
No 78
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.49 E-value=1.5e-13 Score=118.20 Aligned_cols=100 Identities=14% Similarity=0.185 Sum_probs=81.2
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+|||+||| .|..+..+++ . +.+|+++|+|+.+++.|++.. .+++++++|+.+... .+.||+|++
T Consensus 39 ~~~~~vLdiG~G-~G~~~~~l~~-~--~~~v~~~D~s~~~~~~a~~~~-------~~~~~~~~d~~~~~~-~~~~D~v~~ 106 (239)
T 3bxo_A 39 PEASSLLDVACG-TGTHLEHFTK-E--FGDTAGLELSEDMLTHARKRL-------PDATLHQGDMRDFRL-GRKFSAVVS 106 (239)
T ss_dssp TTCCEEEEETCT-TSHHHHHHHH-H--HSEEEEEESCHHHHHHHHHHC-------TTCEEEECCTTTCCC-SSCEEEEEE
T ss_pred CCCCeEEEeccc-CCHHHHHHHH-h--CCcEEEEeCCHHHHHHHHHhC-------CCCEEEECCHHHccc-CCCCcEEEE
Confidence 577899999999 8999999988 2 349999999999999999873 358999999987543 368999995
Q ss_pred cC-cC-CC-CHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 209 AA-LV-GM-SKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~-~~-~~-~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.. .. +. ..++...+++++.+.|+|||++++..
T Consensus 107 ~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 107 MFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp CTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred cCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 43 22 22 34677899999999999999999864
No 79
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.48 E-value=2.7e-13 Score=116.12 Aligned_cols=108 Identities=17% Similarity=0.154 Sum_probs=86.7
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhc--cCCCccEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKE--KLGEYDCI 206 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~--~l~~fD~V 206 (284)
.++.+||||||| .|..++.+|+ ..++.+|+|+|+|+.+++.|+++++..+ + .+++++++|+.+... +.+.||.|
T Consensus 37 ~~~~~vLDiGcG-~G~~~~~la~-~~p~~~v~giD~s~~~l~~a~~~~~~~~-~-~nv~~~~~d~~~l~~~~~~~~~d~v 112 (213)
T 2fca_A 37 NDNPIHIEVGTG-KGQFISGMAK-QNPDINYIGIELFKSVIVTAVQKVKDSE-A-QNVKLLNIDADTLTDVFEPGEVKRV 112 (213)
T ss_dssp SCCCEEEEECCT-TSHHHHHHHH-HCTTSEEEEECSCHHHHHHHHHHHHHSC-C-SSEEEECCCGGGHHHHCCTTSCCEE
T ss_pred CCCceEEEEecC-CCHHHHHHHH-HCCCCCEEEEEechHHHHHHHHHHHHcC-C-CCEEEEeCCHHHHHhhcCcCCcCEE
Confidence 467799999999 8999999998 5688999999999999999999988755 3 579999999987532 23679999
Q ss_pred EEcCcCCCCHH-------HHHHHHHHHHhccccCcEEEEEe
Q 039591 207 FLAALVGMSKE-------EKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 207 ~~~~~~~~~~~-------~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
++.....+... ....+++.+.+.|+|||.+++.+
T Consensus 113 ~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 113 YLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp EEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred EEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 87643221110 02678999999999999999876
No 80
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.48 E-value=1.4e-13 Score=121.50 Aligned_cols=107 Identities=21% Similarity=0.351 Sum_probs=90.3
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+||||||| .|..+..+++ ..++.+|+++|+|+.+++.|++++...+ + .+++++++|+.+.....+.||+|++
T Consensus 36 ~~~~~vLDiG~G-~G~~~~~l~~-~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~-~~~~~~~~d~~~~~~~~~~fD~v~~ 111 (276)
T 3mgg_A 36 PPGAKVLEAGCG-IGAQTVILAK-NNPDAEITSIDISPESLEKARENTEKNG-I-KNVKFLQANIFSLPFEDSSFDHIFV 111 (276)
T ss_dssp CTTCEEEETTCT-TSHHHHHHHH-HCTTSEEEEEESCHHHHHHHHHHHHHTT-C-CSEEEEECCGGGCCSCTTCEEEEEE
T ss_pred CCCCeEEEecCC-CCHHHHHHHH-hCCCCEEEEEECCHHHHHHHHHHHHHcC-C-CCcEEEEcccccCCCCCCCeeEEEE
Confidence 678899999999 8999999988 5678999999999999999999987755 3 5799999999876544478999998
Q ss_pred cCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 209 AALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
....... .+...+++++.+.|||||++++..
T Consensus 112 ~~~l~~~-~~~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 112 CFVLEHL-QSPEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp ESCGGGC-SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred echhhhc-CCHHHHHHHHHHHcCCCcEEEEEE
Confidence 8755333 344689999999999999999865
No 81
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.48 E-value=1.3e-13 Score=123.59 Aligned_cols=108 Identities=11% Similarity=0.197 Sum_probs=87.2
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccC-CCCCeEEEEcchhhhhccCCCccEE
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFE-FEKRMKFLTGDILQVKEKLGEYDCI 206 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~-l~~~v~~~~~D~~~~~~~l~~fD~V 206 (284)
...+.+||||||| .|..+..+++ .+.+|+++|+|+.+++.|+++....+. +..+++|+++|+.+... .+.||+|
T Consensus 80 ~~~~~~vLDlGcG-~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v 154 (299)
T 3g2m_A 80 GPVSGPVLELAAG-MGRLTFPFLD---LGWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-DKRFGTV 154 (299)
T ss_dssp CCCCSCEEEETCT-TTTTHHHHHT---TTCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-SCCEEEE
T ss_pred CCCCCcEEEEecc-CCHHHHHHHH---cCCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-CCCcCEE
Confidence 3455699999999 8999999998 378999999999999999999876320 11679999999987543 3789999
Q ss_pred EEcCc-C-CCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 207 FLAAL-V-GMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 207 ~~~~~-~-~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
++... . ...+++...+++++.+.|||||+|++..
T Consensus 155 ~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 190 (299)
T 3g2m_A 155 VISSGSINELDEADRRGLYASVREHLEPGGKFLLSL 190 (299)
T ss_dssp EECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 86532 2 3344578999999999999999999866
No 82
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.48 E-value=7.1e-14 Score=125.33 Aligned_cols=110 Identities=21% Similarity=0.373 Sum_probs=86.4
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccC---------------------------
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFE--------------------------- 181 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~--------------------------- 181 (284)
.++.+||||||| .|..++.+++ .+++.+|+++|+|+.+++.|++++...+.
T Consensus 45 ~~~~~VLDiGCG-~G~~~~~la~-~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (292)
T 3g07_A 45 FRGRDVLDLGCN-VGHLTLSIAC-KWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRK 122 (292)
T ss_dssp TTTSEEEEESCT-TCHHHHHHHH-HTCCSEEEEEESCHHHHHHHHHTC--------------------------------
T ss_pred cCCCcEEEeCCC-CCHHHHHHHH-HcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccc
Confidence 367899999999 8999999998 56788999999999999999998765320
Q ss_pred -----------------------------CCCCeEEEEcchhhhh-----ccCCCccEEEEcCcCCC-----CHHHHHHH
Q 039591 182 -----------------------------FEKRMKFLTGDILQVK-----EKLGEYDCIFLAALVGM-----SKEEKMKI 222 (284)
Q Consensus 182 -----------------------------l~~~v~~~~~D~~~~~-----~~l~~fD~V~~~~~~~~-----~~~~k~~~ 222 (284)
+..+++|+++|+.... ...+.||+|++.....+ ..++..++
T Consensus 123 ~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~ 202 (292)
T 3g07_A 123 RSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRM 202 (292)
T ss_dssp -------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHH
T ss_pred cccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHH
Confidence 1158999999987432 12378999998775411 23477899
Q ss_pred HHHHHhccccCcEEEEEe
Q 039591 223 IRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 223 l~~~~~~L~pGG~lv~~~ 240 (284)
++++.++|+|||+|++..
T Consensus 203 l~~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 203 FRRIYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHHHHEEEEEEEEEEC
T ss_pred HHHHHHHhCCCcEEEEec
Confidence 999999999999999964
No 83
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.48 E-value=4.9e-13 Score=110.64 Aligned_cols=105 Identities=18% Similarity=0.234 Sum_probs=87.6
Q ss_pred ccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEE
Q 039591 127 GVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCI 206 (284)
Q Consensus 127 ~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V 206 (284)
...++.+|||+||| .|..++.+++ .+.+|+++|+|+.+++.|++++...+ +..+++++++|+.+.....+.||+|
T Consensus 30 ~~~~~~~vldiG~G-~G~~~~~l~~---~~~~v~~~D~~~~~~~~a~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~D~v 104 (192)
T 1l3i_A 30 EPGKNDVAVDVGCG-TGGVTLELAG---RVRRVYAIDRNPEAISTTEMNLQRHG-LGDNVTLMEGDAPEALCKIPDIDIA 104 (192)
T ss_dssp CCCTTCEEEEESCT-TSHHHHHHHT---TSSEEEEEESCHHHHHHHHHHHHHTT-CCTTEEEEESCHHHHHTTSCCEEEE
T ss_pred CCCCCCEEEEECCC-CCHHHHHHHH---hcCEEEEEECCHHHHHHHHHHHHHcC-CCcceEEEecCHHHhcccCCCCCEE
Confidence 34678899999999 7999999987 23899999999999999999987754 4468999999998744444689999
Q ss_pred EEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 207 FLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 207 ~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+++...+ ....+++.+.+.|+|||.+++..
T Consensus 105 ~~~~~~~----~~~~~l~~~~~~l~~gG~l~~~~ 134 (192)
T 1l3i_A 105 VVGGSGG----ELQEILRIIKDKLKPGGRIIVTA 134 (192)
T ss_dssp EESCCTT----CHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EECCchH----HHHHHHHHHHHhcCCCcEEEEEe
Confidence 9887543 23789999999999999999866
No 84
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.48 E-value=6.9e-13 Score=113.22 Aligned_cols=105 Identities=16% Similarity=0.235 Sum_probs=86.7
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+|||+||| .|..+..+++ .+.+|+++|+|+.+++.|+++....+ .+++++++|+.+.....+.||+|++
T Consensus 37 ~~~~~vLDlG~G-~G~~~~~l~~---~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~d~~~~~~~~~~~D~v~~ 109 (227)
T 1ve3_A 37 KKRGKVLDLACG-VGGFSFLLED---YGFEVVGVDISEDMIRKAREYAKSRE---SNVEFIVGDARKLSFEDKTFDYVIF 109 (227)
T ss_dssp CSCCEEEEETCT-TSHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHHTT---CCCEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCCeEEEEecc-CCHHHHHHHH---cCCEEEEEECCHHHHHHHHHHHHhcC---CCceEEECchhcCCCCCCcEEEEEE
Confidence 457899999999 8888888888 34499999999999999999987643 6899999999874333368999998
Q ss_pred cCcC-CCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 209 AALV-GMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~-~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.... ....++...+++++.+.|+|||++++..
T Consensus 110 ~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 142 (227)
T 1ve3_A 110 IDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYF 142 (227)
T ss_dssp ESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 8652 3345677899999999999999998865
No 85
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.48 E-value=4e-13 Score=121.31 Aligned_cols=107 Identities=11% Similarity=0.090 Sum_probs=89.2
Q ss_pred ccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEE
Q 039591 127 GVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCI 206 (284)
Q Consensus 127 ~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V 206 (284)
...++.+||||||| .|..+..+++. . +.+|+++|+|+.+++.|+++....+ +..+++++++|+.+.. +.||+|
T Consensus 87 ~~~~~~~vLDiGcG-~G~~~~~la~~-~-~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~---~~fD~v 159 (318)
T 2fk8_A 87 DLKPGMTLLDIGCG-WGTTMRRAVER-F-DVNVIGLTLSKNQHARCEQVLASID-TNRSRQVLLQGWEDFA---EPVDRI 159 (318)
T ss_dssp CCCTTCEEEEESCT-TSHHHHHHHHH-H-CCEEEEEESCHHHHHHHHHHHHTSC-CSSCEEEEESCGGGCC---CCCSEE
T ss_pred CCCCcCEEEEEccc-chHHHHHHHHH-C-CCEEEEEECCHHHHHHHHHHHHhcC-CCCceEEEECChHHCC---CCcCEE
Confidence 34678899999999 79889899872 2 6799999999999999999987754 5578999999997642 789999
Q ss_pred EEcCcC-CCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 207 FLAALV-GMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 207 ~~~~~~-~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
++.... +...++...+++++.+.|||||++++..
T Consensus 160 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 194 (318)
T 2fk8_A 160 VSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQS 194 (318)
T ss_dssp EEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred EEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 987654 3333577899999999999999999866
No 86
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.47 E-value=2.6e-13 Score=114.50 Aligned_cols=105 Identities=17% Similarity=0.229 Sum_probs=85.4
Q ss_pred CCCCeEEEecCCCChHH-HHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEE
Q 039591 129 VQPKKVAFVGSGPMPLT-SIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIF 207 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~-ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~ 207 (284)
.++.+|||+||| .|.. ...+++ ++.+|+++|+|+.+++.|+++....+ .+++++++|+.+.....+.||+|+
T Consensus 22 ~~~~~vLDiGcG-~G~~~~~~~~~---~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~d~~~~~~~~~~fD~v~ 94 (209)
T 2p8j_A 22 NLDKTVLDCGAG-GDLPPLSIFVE---DGYKTYGIEISDLQLKKAENFSRENN---FKLNISKGDIRKLPFKDESMSFVY 94 (209)
T ss_dssp SSCSEEEEESCC-SSSCTHHHHHH---TTCEEEEEECCHHHHHHHHHHHHHHT---CCCCEEECCTTSCCSCTTCEEEEE
T ss_pred CCCCEEEEECCC-CCHHHHHHHHh---CCCEEEEEECCHHHHHHHHHHHHhcC---CceEEEECchhhCCCCCCceeEEE
Confidence 567899999999 7775 444554 67899999999999999999987644 578999999987543347899999
Q ss_pred EcCcC-CCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 208 LAALV-GMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 208 ~~~~~-~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+.... +...++...+++++.+.|+|||++++..
T Consensus 95 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 95 SYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp ECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 87543 4445788999999999999999999865
No 87
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.47 E-value=1.2e-13 Score=124.41 Aligned_cols=110 Identities=15% Similarity=0.290 Sum_probs=84.1
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccC--C-CCCeEEEEcchhhhhccC-CCcc
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFE--F-EKRMKFLTGDILQVKEKL-GEYD 204 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~--l-~~~v~~~~~D~~~~~~~l-~~fD 204 (284)
.++++||||||| .|..+..+++ +.+..+|+++|+|+.+++.|++++...+. + ..+++++.+|+.+..... ++||
T Consensus 82 ~~~~~VLdiG~G-~G~~~~~l~~-~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD 159 (294)
T 3adn_A 82 GHAKHVLIIGGG-DGAMLREVTR-HKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFD 159 (294)
T ss_dssp TTCCEEEEESCT-TCHHHHHHHT-CTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEE
T ss_pred CCCCEEEEEeCC-hhHHHHHHHh-CCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCcc
Confidence 568899999999 8999999998 55678999999999999999998765421 1 358999999998764332 6899
Q ss_pred EEEEcCcCCCCHHHH---HHHHHHHHhccccCcEEEEEe
Q 039591 205 CIFLAALVGMSKEEK---MKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 205 ~V~~~~~~~~~~~~k---~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+|+++......+... .++++.+.+.|+|||++++..
T Consensus 160 vIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 160 VIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EEEECC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 999987543221211 689999999999999999875
No 88
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.47 E-value=6.3e-13 Score=108.78 Aligned_cols=137 Identities=16% Similarity=0.193 Sum_probs=97.2
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEE
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIF 207 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~ 207 (284)
..++.+|||+||| .|..+..+++ .+.+|+++|+|+.+++.|+++ . .++++..+| . ....+.||+|+
T Consensus 15 ~~~~~~vLDiG~G-~G~~~~~l~~---~~~~v~~vD~s~~~~~~a~~~----~---~~v~~~~~d-~--~~~~~~~D~v~ 80 (170)
T 3i9f_A 15 EGKKGVIVDYGCG-NGFYCKYLLE---FATKLYCIDINVIALKEVKEK----F---DSVITLSDP-K--EIPDNSVDFIL 80 (170)
T ss_dssp SSCCEEEEEETCT-TCTTHHHHHT---TEEEEEEECSCHHHHHHHHHH----C---TTSEEESSG-G--GSCTTCEEEEE
T ss_pred cCCCCeEEEECCC-CCHHHHHHHh---hcCeEEEEeCCHHHHHHHHHh----C---CCcEEEeCC-C--CCCCCceEEEE
Confidence 3677899999999 8999999988 234999999999999999988 1 478999999 2 22337899999
Q ss_pred EcCcCCCCHHHHHHHHHHHHhccccCcEEEEEeccchhhhcCCCC----CCC----CCCCcEEEEEEcCCCceeeEEEEE
Q 039591 208 LAALVGMSKEEKMKIIRHIRKYMKDGGILLVRSAKGARAFLYPVV----ERH----DLLDFEVLSIFHPIDEVINSVILV 279 (284)
Q Consensus 208 ~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~~g~~~~lyp~v----~~~----~l~gf~~~~~~~p~~~v~nsvi~~ 279 (284)
+....... ++...+++++.+.|+|||++++...........|.. ... .+.||+++......+.. -.+++
T Consensus 81 ~~~~l~~~-~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Gf~~~~~~~~~~~~--~~l~~ 157 (170)
T 3i9f_A 81 FANSFHDM-DDKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFSNFVVEKRFNPTPYH--FGLVL 157 (170)
T ss_dssp EESCSTTC-SCHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTTTEEEEEEECSSTTE--EEEEE
T ss_pred Eccchhcc-cCHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHhCcEEEEccCCCCce--EEEEE
Confidence 88766444 466899999999999999999876211111111111 111 12499998876655433 34444
Q ss_pred ee
Q 039591 280 RK 281 (284)
Q Consensus 280 rk 281 (284)
+|
T Consensus 158 ~~ 159 (170)
T 3i9f_A 158 KR 159 (170)
T ss_dssp EE
T ss_pred ec
Confidence 44
No 89
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.47 E-value=3.2e-13 Score=122.59 Aligned_cols=107 Identities=19% Similarity=0.284 Sum_probs=88.6
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+|||+||| .|..+..+++ ..++.+++++|++ .+++.|++++...+ +..+++|+.+|+.+.... +.||+|++
T Consensus 164 ~~~~~vlDvG~G-~G~~~~~l~~-~~p~~~~~~~D~~-~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~-~~~D~v~~ 238 (335)
T 2r3s_A 164 IEPLKVLDISAS-HGLFGIAVAQ-HNPNAEIFGVDWA-SVLEVAKENARIQG-VASRYHTIAGSAFEVDYG-NDYDLVLL 238 (335)
T ss_dssp CCCSEEEEETCT-TCHHHHHHHH-HCTTCEEEEEECH-HHHHHHHHHHHHHT-CGGGEEEEESCTTTSCCC-SCEEEEEE
T ss_pred CCCCEEEEECCC-cCHHHHHHHH-HCCCCeEEEEecH-HHHHHHHHHHHhcC-CCcceEEEecccccCCCC-CCCcEEEE
Confidence 567899999999 8989999988 5688999999999 99999999987754 556899999999864221 45999998
Q ss_pred cCcC-CCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 209 AALV-GMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~-~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.... .+..++..++++++.+.|+|||++++..
T Consensus 239 ~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 271 (335)
T 2r3s_A 239 PNFLHHFDVATCEQLLRKIKTALAVEGKVIVFD 271 (335)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cchhccCCHHHHHHHHHHHHHhCCCCcEEEEEe
Confidence 6644 4455677899999999999999888765
No 90
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.46 E-value=1.6e-12 Score=120.30 Aligned_cols=106 Identities=16% Similarity=0.223 Sum_probs=89.0
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+||||||| .|..+..+++ ..|+.+++++|+ +.+++.|++++...+ +.++++|+.+|+.+... ..||+|++
T Consensus 201 ~~~~~vlDvG~G-~G~~~~~l~~-~~p~~~~~~~D~-~~~~~~a~~~~~~~~-l~~~v~~~~~d~~~~~p--~~~D~v~~ 274 (369)
T 3gwz_A 201 SGAATAVDIGGG-RGSLMAAVLD-AFPGLRGTLLER-PPVAEEARELLTGRG-LADRCEILPGDFFETIP--DGADVYLI 274 (369)
T ss_dssp TTCSEEEEETCT-TSHHHHHHHH-HCTTCEEEEEEC-HHHHHHHHHHHHHTT-CTTTEEEEECCTTTCCC--SSCSEEEE
T ss_pred ccCcEEEEeCCC-ccHHHHHHHH-HCCCCeEEEEcC-HHHHHHHHHhhhhcC-cCCceEEeccCCCCCCC--CCceEEEh
Confidence 567899999999 8999999998 578999999999 999999999987744 56899999999974222 37999998
Q ss_pred cCcCC-CCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 209 AALVG-MSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~~-~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
....+ +..++..++++++.+.|+|||++++..
T Consensus 275 ~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e 307 (369)
T 3gwz_A 275 KHVLHDWDDDDVVRILRRIATAMKPDSRLLVID 307 (369)
T ss_dssp ESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred hhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 77553 444555699999999999999998865
No 91
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.46 E-value=2.2e-13 Score=114.70 Aligned_cols=100 Identities=18% Similarity=0.194 Sum_probs=84.7
Q ss_pred CCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEEc
Q 039591 130 QPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFLA 209 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~~ 209 (284)
.+.+|||+||| .|..+..+++ .+.+|+++|+|+.+++.|+++. .+++++++|+.+.....+.||+|++.
T Consensus 41 ~~~~vLDiGcG-~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~-------~~~~~~~~d~~~~~~~~~~fD~v~~~ 109 (203)
T 3h2b_A 41 VDGVILDVGSG-TGRWTGHLAS---LGHQIEGLEPATRLVELARQTH-------PSVTFHHGTITDLSDSPKRWAGLLAW 109 (203)
T ss_dssp CCSCEEEETCT-TCHHHHHHHH---TTCCEEEECCCHHHHHHHHHHC-------TTSEEECCCGGGGGGSCCCEEEEEEE
T ss_pred CCCeEEEecCC-CCHHHHHHHh---cCCeEEEEeCCHHHHHHHHHhC-------CCCeEEeCcccccccCCCCeEEEEeh
Confidence 37899999999 8999999998 3779999999999999999872 46899999998865444789999997
Q ss_pred CcC-CCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 210 ALV-GMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 210 ~~~-~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
... +...++...+++++.+.|+|||++++..
T Consensus 110 ~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 141 (203)
T 3h2b_A 110 YSLIHMGPGELPDALVALRMAVEDGGGLLMSF 141 (203)
T ss_dssp SSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 655 3333577899999999999999999876
No 92
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.46 E-value=2.3e-13 Score=112.80 Aligned_cols=106 Identities=12% Similarity=0.089 Sum_probs=84.2
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhcc----CCCcc
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEK----LGEYD 204 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~----l~~fD 204 (284)
.++.+|||+||| .|..++.+++ .+..+|+++|+|+.+++.|+++++..+ +..+++++++|+.+.... .+.||
T Consensus 43 ~~~~~vLD~GcG-~G~~~~~~~~--~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~fD 118 (187)
T 2fhp_A 43 FDGGMALDLYSG-SGGLAIEAVS--RGMDKSICIEKNFAALKVIKENIAITK-EPEKFEVRKMDANRALEQFYEEKLQFD 118 (187)
T ss_dssp CSSCEEEETTCT-TCHHHHHHHH--TTCSEEEEEESCHHHHHHHHHHHHHHT-CGGGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred cCCCCEEEeCCc-cCHHHHHHHH--cCCCEEEEEECCHHHHHHHHHHHHHhC-CCcceEEEECcHHHHHHHHHhcCCCCC
Confidence 467899999999 8998888887 355799999999999999999987754 456899999999875431 36899
Q ss_pred EEEEcCcCCCCHHHHHHHHHHH--HhccccCcEEEEEe
Q 039591 205 CIFLAALVGMSKEEKMKIIRHI--RKYMKDGGILLVRS 240 (284)
Q Consensus 205 ~V~~~~~~~~~~~~k~~~l~~~--~~~L~pGG~lv~~~ 240 (284)
+|+++..... ......++.+ .++|+|||++++..
T Consensus 119 ~i~~~~~~~~--~~~~~~~~~l~~~~~L~~gG~l~~~~ 154 (187)
T 2fhp_A 119 LVLLDPPYAK--QEIVSQLEKMLERQLLTNEAVIVCET 154 (187)
T ss_dssp EEEECCCGGG--CCHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred EEEECCCCCc--hhHHHHHHHHHHhcccCCCCEEEEEe
Confidence 9999876321 1234556666 88999999999876
No 93
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.46 E-value=1.6e-12 Score=113.23 Aligned_cols=147 Identities=12% Similarity=0.078 Sum_probs=96.0
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhc--c-CCCcc
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKE--K-LGEYD 204 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~--~-l~~fD 204 (284)
.+++.+|||+||| .|..+..+|+...+.++|+++|+++.+++...+..+.. .++.++++|+..... . .+.||
T Consensus 74 l~~g~~VLDlG~G-tG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r----~nv~~i~~Da~~~~~~~~~~~~~D 148 (232)
T 3id6_C 74 IRKGTKVLYLGAA-SGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR----PNIFPLLADARFPQSYKSVVENVD 148 (232)
T ss_dssp CCTTCEEEEETCT-TSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC----TTEEEEECCTTCGGGTTTTCCCEE
T ss_pred CCCCCEEEEEeec-CCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc----CCeEEEEcccccchhhhccccceE
Confidence 4789999999999 67778888874456889999999999976555544431 579999999875321 1 26899
Q ss_pred EEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEeccc-hhhhcCCCCCCC----CC--CCcEEEEEEcCCCce-eeEE
Q 039591 205 CIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRSAKG-ARAFLYPVVERH----DL--LDFEVLSIFHPIDEV-INSV 276 (284)
Q Consensus 205 ~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~~g-~~~~lyp~v~~~----~l--~gf~~~~~~~p~~~v-~nsv 276 (284)
+|+++... +.....+.+.+.+.|||||++++.--.+ ...-..|.-... .+ .||+++...+..+.- ..-+
T Consensus 149 ~I~~d~a~---~~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~~~~~~~L~~~gf~~~~~~~l~p~~~~h~~ 225 (232)
T 3id6_C 149 VLYVDIAQ---PDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIYKTEVEKLENSNFETIQIINLDPYDKDHAI 225 (232)
T ss_dssp EEEECCCC---TTHHHHHHHHHHHHEEEEEEEEEEEC-------CCSSSSTTHHHHHHHHTTEEEEEEEECTTTCSSCEE
T ss_pred EEEecCCC---hhHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHHHHHHHHHHHCCCEEEEEeccCCCcCceEE
Confidence 99998654 2333344455666999999999863111 000111211111 12 589999886644322 2347
Q ss_pred EEEeec
Q 039591 277 ILVRKP 282 (284)
Q Consensus 277 i~~rk~ 282 (284)
|++||+
T Consensus 226 v~~~~~ 231 (232)
T 3id6_C 226 VLSKYK 231 (232)
T ss_dssp EEEEEC
T ss_pred EEEEeC
Confidence 778775
No 94
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.46 E-value=1.7e-13 Score=116.08 Aligned_cols=103 Identities=17% Similarity=0.212 Sum_probs=85.0
Q ss_pred ccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEE
Q 039591 127 GVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCI 206 (284)
Q Consensus 127 ~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V 206 (284)
...++.+|||+||| .|..+..+++ . +.+|+++|+|+.+++.|+++++..+ + .+++++.+|+.+.....++||+|
T Consensus 74 ~~~~~~~vLdiG~G-~G~~~~~la~-~--~~~v~~vD~~~~~~~~a~~~~~~~~-~-~~v~~~~~d~~~~~~~~~~~D~i 147 (210)
T 3lbf_A 74 ELTPQSRVLEIGTG-SGYQTAILAH-L--VQHVCSVERIKGLQWQARRRLKNLD-L-HNVSTRHGDGWQGWQARAPFDAI 147 (210)
T ss_dssp TCCTTCEEEEECCT-TSHHHHHHHH-H--SSEEEEEESCHHHHHHHHHHHHHTT-C-CSEEEEESCGGGCCGGGCCEEEE
T ss_pred CCCCCCEEEEEcCC-CCHHHHHHHH-h--CCEEEEEecCHHHHHHHHHHHHHcC-C-CceEEEECCcccCCccCCCccEE
Confidence 44788999999999 8999999998 2 7899999999999999999988755 3 47999999998754444789999
Q ss_pred EEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEecc
Q 039591 207 FLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRSAK 242 (284)
Q Consensus 207 ~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~~ 242 (284)
+++....... +.+.+.|+|||++++....
T Consensus 148 ~~~~~~~~~~-------~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 148 IVTAAPPEIP-------TALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp EESSBCSSCC-------THHHHTEEEEEEEEEEECS
T ss_pred EEccchhhhh-------HHHHHhcccCcEEEEEEcC
Confidence 9987664331 3678999999999987643
No 95
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.46 E-value=3.8e-13 Score=116.57 Aligned_cols=106 Identities=12% Similarity=0.233 Sum_probs=86.4
Q ss_pred CCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEEc
Q 039591 130 QPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFLA 209 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~~ 209 (284)
++.+||||||| .|..+..+++ . ...+|+++|+|+.+++.|+++....+ ..+++++++|+.+.....+.||+|++.
T Consensus 79 ~~~~vLDiGcG-~G~~~~~l~~-~-~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~~d~~~~~~~~~~fD~v~~~ 153 (241)
T 2ex4_A 79 GTSCALDCGAG-IGRITKRLLL-P-LFREVDMVDITEDFLVQAKTYLGEEG--KRVRNYFCCGLQDFTPEPDSYDVIWIQ 153 (241)
T ss_dssp CCSEEEEETCT-TTHHHHHTTT-T-TCSEEEEEESCHHHHHHHHHHTGGGG--GGEEEEEECCGGGCCCCSSCEEEEEEE
T ss_pred CCCEEEEECCC-CCHHHHHHHH-h-cCCEEEEEeCCHHHHHHHHHHhhhcC--CceEEEEEcChhhcCCCCCCEEEEEEc
Confidence 58899999999 8999988887 2 35699999999999999999987643 257999999988754433679999988
Q ss_pred CcC-CCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 210 ALV-GMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 210 ~~~-~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
... +...++...+++++.+.|+|||++++..
T Consensus 154 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 185 (241)
T 2ex4_A 154 WVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKD 185 (241)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhhCCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 654 3333445689999999999999999865
No 96
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.46 E-value=2.2e-13 Score=123.79 Aligned_cols=110 Identities=22% Similarity=0.326 Sum_probs=85.0
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhcc-CC-CCCeEEEEcchhhhhcc-CCCccE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDF-EF-EKRMKFLTGDILQVKEK-LGEYDC 205 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~-~l-~~~v~~~~~D~~~~~~~-l~~fD~ 205 (284)
..+.+||+|||| .|..+..+++ +.+..+|+++|+|+.+++.|++++...+ ++ ..+++++.+|+.+.... .++||+
T Consensus 107 ~~~~~VLdIG~G-~G~~~~~l~~-~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~ 184 (314)
T 2b2c_A 107 PDPKRVLIIGGG-DGGILREVLK-HESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDV 184 (314)
T ss_dssp SSCCEEEEESCT-TSHHHHHHTT-CTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEE
T ss_pred CCCCEEEEEcCC-cCHHHHHHHH-cCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceE
Confidence 567899999999 9999999998 5567899999999999999999986531 12 47899999999875432 368999
Q ss_pred EEEcCcCCCCHHHH---HHHHHHHHhccccCcEEEEEe
Q 039591 206 IFLAALVGMSKEEK---MKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 206 V~~~~~~~~~~~~k---~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|+++......+... .++++.+.++|+|||++++..
T Consensus 185 Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 185 IITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp EEECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred EEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 99987532221111 689999999999999999976
No 97
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.46 E-value=2.6e-13 Score=120.91 Aligned_cols=106 Identities=18% Similarity=0.273 Sum_probs=89.3
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCC-CcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLK-ATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIF 207 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~-~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~ 207 (284)
.++.+||||||| .|..+..+++ ..+ +.+|+++|+|+.+++.|++++...+ .+++|+++|+.+... .++||+|+
T Consensus 21 ~~~~~vLDiGcG-~G~~~~~l~~-~~~~~~~v~gvD~s~~~~~~a~~~~~~~~---~~v~~~~~d~~~~~~-~~~fD~v~ 94 (284)
T 3gu3_A 21 TKPVHIVDYGCG-YGYLGLVLMP-LLPEGSKYTGIDSGETLLAEARELFRLLP---YDSEFLEGDATEIEL-NDKYDIAI 94 (284)
T ss_dssp CSCCEEEEETCT-TTHHHHHHTT-TSCTTCEEEEEESCHHHHHHHHHHHHSSS---SEEEEEESCTTTCCC-SSCEEEEE
T ss_pred CCCCeEEEecCC-CCHHHHHHHH-hCCCCCEEEEEECCHHHHHHHHHHHHhcC---CceEEEEcchhhcCc-CCCeeEEE
Confidence 678899999999 8999999998 455 5899999999999999999987644 489999999987543 26899999
Q ss_pred EcCcCCCCHHHHHHHHHHHHhccccCcEEEEEec
Q 039591 208 LAALVGMSKEEKMKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 208 ~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
+....+.. .+...+++++.+.|||||.+++...
T Consensus 95 ~~~~l~~~-~~~~~~l~~~~~~LkpgG~l~~~~~ 127 (284)
T 3gu3_A 95 CHAFLLHM-TTPETMLQKMIHSVKKGGKIICFEP 127 (284)
T ss_dssp EESCGGGC-SSHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred ECChhhcC-CCHHHHHHHHHHHcCCCCEEEEEec
Confidence 98765433 4557999999999999999997653
No 98
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.46 E-value=1e-13 Score=122.55 Aligned_cols=98 Identities=14% Similarity=0.108 Sum_probs=81.6
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
..+.+||||||| .|..+..|++ .+.+|+++|+|+.|++.|++. .+++++++|+.+...+.+.||+|++
T Consensus 38 ~~~~~vLDvGcG-tG~~~~~l~~---~~~~v~gvD~s~~ml~~a~~~--------~~v~~~~~~~e~~~~~~~sfD~v~~ 105 (257)
T 4hg2_A 38 PARGDALDCGCG-SGQASLGLAE---FFERVHAVDPGEAQIRQALRH--------PRVTYAVAPAEDTGLPPASVDVAIA 105 (257)
T ss_dssp SCSSEEEEESCT-TTTTHHHHHT---TCSEEEEEESCHHHHHTCCCC--------TTEEEEECCTTCCCCCSSCEEEEEE
T ss_pred CCCCCEEEEcCC-CCHHHHHHHH---hCCEEEEEeCcHHhhhhhhhc--------CCceeehhhhhhhcccCCcccEEEE
Confidence 445799999999 8999999997 568999999999999877532 4799999999876555588999999
Q ss_pred cCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 209 AALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
....++. +..++++++.++|||||+|++..
T Consensus 106 ~~~~h~~--~~~~~~~e~~rvLkpgG~l~~~~ 135 (257)
T 4hg2_A 106 AQAMHWF--DLDRFWAELRRVARPGAVFAAVT 135 (257)
T ss_dssp CSCCTTC--CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeehhHh--hHHHHHHHHHHHcCCCCEEEEEE
Confidence 8766554 34679999999999999998754
No 99
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.45 E-value=2.7e-13 Score=126.23 Aligned_cols=110 Identities=19% Similarity=0.249 Sum_probs=89.9
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhc-----c-CCCCCeEEEEcchhhh------
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATD-----F-EFEKRMKFLTGDILQV------ 196 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~-----~-~l~~~v~~~~~D~~~~------ 196 (284)
.++.+||||||| .|..++.+++...++.+|+++|+|+.+++.|+++++.. | ....+++|+++|+.+.
T Consensus 82 ~~~~~VLDlGcG-~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 82 LEGATVLDLGCG-TGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GTTCEEEEESCT-TSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCEEEEecCc-cCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 578899999999 89999999884347889999999999999999987653 2 1126899999999875
Q ss_pred hccCCCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 197 KEKLGEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 197 ~~~l~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
....+.||+|+++....+. .++..+++++.++|||||++++..
T Consensus 161 ~~~~~~fD~V~~~~~l~~~-~d~~~~l~~~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLS-TNKLALFKEIHRVLRDGGELYFSD 203 (383)
T ss_dssp CCCTTCEEEEEEESCGGGC-SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCCEEEEEEccchhcC-CCHHHHHHHHHHHcCCCCEEEEEE
Confidence 2223689999998766443 457899999999999999999865
No 100
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.45 E-value=5.2e-13 Score=121.51 Aligned_cols=144 Identities=16% Similarity=0.144 Sum_probs=106.3
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+||||||| .|..+..+++ ..|+.+++++|+ |.+++.|++.+...+ +.++++|+.+|+.+.. + .+||+|++
T Consensus 168 ~~~~~vlDvG~G-~G~~~~~l~~-~~p~~~~~~~D~-~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~-p-~~~D~v~~ 241 (332)
T 3i53_A 168 AALGHVVDVGGG-SGGLLSALLT-AHEDLSGTVLDL-QGPASAAHRRFLDTG-LSGRAQVVVGSFFDPL-P-AGAGGYVL 241 (332)
T ss_dssp GGGSEEEEETCT-TSHHHHHHHH-HCTTCEEEEEEC-HHHHHHHHHHHHHTT-CTTTEEEEECCTTSCC-C-CSCSEEEE
T ss_pred CCCCEEEEeCCC-hhHHHHHHHH-HCCCCeEEEecC-HHHHHHHHHhhhhcC-cCcCeEEecCCCCCCC-C-CCCcEEEE
Confidence 456899999999 8999999988 578899999999 999999999987744 5688999999997422 1 28999998
Q ss_pred cCcCC-CCHHHHHHHHHHHHhccccCcEEEEEeccch-------hhh------cCCCCCCC---CC---CCcEEEEEEcC
Q 039591 209 AALVG-MSKEEKMKIIRHIRKYMKDGGILLVRSAKGA-------RAF------LYPVVERH---DL---LDFEVLSIFHP 268 (284)
Q Consensus 209 ~~~~~-~~~~~k~~~l~~~~~~L~pGG~lv~~~~~g~-------~~~------lyp~v~~~---~l---~gf~~~~~~~p 268 (284)
....+ +..++..++++++.+.|+|||++++...... ..+ ........ .+ .||+++.+. |
T Consensus 242 ~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~-~ 320 (332)
T 3i53_A 242 SAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRAAH-P 320 (332)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEEE-E
T ss_pred ehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEEE-E
Confidence 87554 4555578999999999999999988652100 000 00000111 12 699998765 4
Q ss_pred CCceeeEEEEEee
Q 039591 269 IDEVINSVILVRK 281 (284)
Q Consensus 269 ~~~v~nsvi~~rk 281 (284)
.+. -|+|.+|+
T Consensus 321 ~~~--~~vie~r~ 331 (332)
T 3i53_A 321 ISY--VSIVEMTA 331 (332)
T ss_dssp CSS--SEEEEEEE
T ss_pred CCC--cEEEEEee
Confidence 444 68888875
No 101
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.45 E-value=3.7e-13 Score=117.33 Aligned_cols=107 Identities=14% Similarity=0.211 Sum_probs=88.7
Q ss_pred HHhhccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCC
Q 039591 123 LKENGVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGE 202 (284)
Q Consensus 123 l~~~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~ 202 (284)
+......++.+|||+||| .|..+..+++ ..++.+|+++|+|+.+++.|+++ . .+++++.+|+.+.. ..+.
T Consensus 26 ~~~~~~~~~~~vLdiG~G-~G~~~~~l~~-~~~~~~v~~~D~s~~~~~~a~~~----~---~~~~~~~~d~~~~~-~~~~ 95 (259)
T 2p35_A 26 LAQVPLERVLNGYDLGCG-PGNSTELLTD-RYGVNVITGIDSDDDMLEKAADR----L---PNTNFGKADLATWK-PAQK 95 (259)
T ss_dssp HTTCCCSCCSSEEEETCT-TTHHHHHHHH-HHCTTSEEEEESCHHHHHHHHHH----S---TTSEEEECCTTTCC-CSSC
T ss_pred HHhcCCCCCCEEEEecCc-CCHHHHHHHH-hCCCCEEEEEECCHHHHHHHHHh----C---CCcEEEECChhhcC-ccCC
Confidence 333444678899999999 8999999988 45788999999999999999987 1 46899999998755 4478
Q ss_pred ccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 203 YDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 203 fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
||+|++....++. ++...+++++.+.|+|||++++..
T Consensus 96 fD~v~~~~~l~~~-~~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 96 ADLLYANAVFQWV-PDHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp EEEEEEESCGGGS-TTHHHHHHHHGGGEEEEEEEEEEE
T ss_pred cCEEEEeCchhhC-CCHHHHHHHHHHhcCCCeEEEEEe
Confidence 9999998765443 466889999999999999999875
No 102
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.45 E-value=3.5e-13 Score=123.45 Aligned_cols=110 Identities=18% Similarity=0.389 Sum_probs=88.3
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhc-cCC-CCCeEEEEcchhhhhccC--CCcc
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATD-FEF-EKRMKFLTGDILQVKEKL--GEYD 204 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~-~~l-~~~v~~~~~D~~~~~~~l--~~fD 204 (284)
..+.+||||||| .|..++.+++ +.+..+|+++|+|+.+++.|++++... .++ ..+++++.+|+.+..... +.||
T Consensus 119 ~~~~~VLdIG~G-~G~~a~~la~-~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fD 196 (334)
T 1xj5_A 119 PNPKKVLVIGGG-DGGVLREVAR-HASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYD 196 (334)
T ss_dssp SCCCEEEEETCS-SSHHHHHHTT-CTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEE
T ss_pred CCCCEEEEECCC-ccHHHHHHHH-cCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCcc
Confidence 567899999999 9999999998 556789999999999999999987643 112 368999999998764432 6899
Q ss_pred EEEEcCcCCCCHHH---HHHHHHHHHhccccCcEEEEEe
Q 039591 205 CIFLAALVGMSKEE---KMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 205 ~V~~~~~~~~~~~~---k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+|+++........+ ..++++.+.+.|+|||++++..
T Consensus 197 lIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 197 AVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp EEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 99998653221111 3789999999999999999974
No 103
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.45 E-value=8.1e-13 Score=114.58 Aligned_cols=103 Identities=10% Similarity=0.076 Sum_probs=83.8
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC-----CCc
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL-----GEY 203 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l-----~~f 203 (284)
.++.+|||+||| .|..+..+++ . +.+|+++|+|+.+++.|+++... .+++|+++|+.+..... ..|
T Consensus 55 ~~~~~vLD~GcG-~G~~~~~la~-~--~~~v~gvD~s~~~~~~a~~~~~~-----~~~~~~~~d~~~~~~~~~~~~~~~~ 125 (245)
T 3ggd_A 55 NPELPLIDFACG-NGTQTKFLSQ-F--FPRVIGLDVSKSALEIAAKENTA-----ANISYRLLDGLVPEQAAQIHSEIGD 125 (245)
T ss_dssp CTTSCEEEETCT-TSHHHHHHHH-H--SSCEEEEESCHHHHHHHHHHSCC-----TTEEEEECCTTCHHHHHHHHHHHCS
T ss_pred CCCCeEEEEcCC-CCHHHHHHHH-h--CCCEEEEECCHHHHHHHHHhCcc-----cCceEEECcccccccccccccccCc
Confidence 677899999999 8999999998 2 34899999999999999998632 57999999998743221 249
Q ss_pred cEEEEcCcCCC-CHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 204 DCIFLAALVGM-SKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 204 D~V~~~~~~~~-~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|+|++....++ ..++...+++++.+.|||||++++..
T Consensus 126 d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 126 ANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIE 163 (245)
T ss_dssp CEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEE
T ss_pred cEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 99998876543 44577899999999999999977765
No 104
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.44 E-value=1.1e-13 Score=116.84 Aligned_cols=107 Identities=13% Similarity=0.068 Sum_probs=68.5
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhcc----CCCcc
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEK----LGEYD 204 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~----l~~fD 204 (284)
.++.+|||+||| .|..++.+++ ..++.+|+++|+|+.+++.|++++...+ .+++++++|+.+...+ .+.||
T Consensus 29 ~~~~~vLDiG~G-~G~~~~~l~~-~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~~~fD 103 (215)
T 4dzr_A 29 PSGTRVIDVGTG-SGCIAVSIAL-ACPGVSVTAVDLSMDALAVARRNAERFG---AVVDWAAADGIEWLIERAERGRPWH 103 (215)
T ss_dssp CTTEEEEEEESS-BCHHHHHHHH-HCTTEEEEEEECC----------------------CCHHHHHHHHHHHHHTTCCBS
T ss_pred CCCCEEEEecCC-HhHHHHHHHH-hCCCCeEEEEECCHHHHHHHHHHHHHhC---CceEEEEcchHhhhhhhhhccCccc
Confidence 577899999999 8999999998 5678899999999999999999987754 2799999999874332 27899
Q ss_pred EEEEcCcCCCC-------HHHH------------------HHHHHHHHhccccCcE-EEEEe
Q 039591 205 CIFLAALVGMS-------KEEK------------------MKIIRHIRKYMKDGGI-LLVRS 240 (284)
Q Consensus 205 ~V~~~~~~~~~-------~~~k------------------~~~l~~~~~~L~pGG~-lv~~~ 240 (284)
+|+++.+.... ...+ ..+++++.++|+|||+ +++..
T Consensus 104 ~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 165 (215)
T 4dzr_A 104 AIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEV 165 (215)
T ss_dssp EEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEEC
T ss_pred EEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 99997544211 1111 6788999999999999 55544
No 105
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.44 E-value=2.8e-12 Score=118.00 Aligned_cols=143 Identities=16% Similarity=0.116 Sum_probs=104.9
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEE
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIF 207 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~ 207 (284)
..++.+|||+||| .|..++.++....++.+|+++|+|+.+++.|+++++..| +. +++|.++|+.+.....+.||+|+
T Consensus 201 ~~~~~~vLD~gcG-sG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g-~~-~i~~~~~D~~~~~~~~~~~D~Ii 277 (354)
T 3tma_A 201 ARPGMRVLDPFTG-SGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASG-LS-WIRFLRADARHLPRFFPEVDRIL 277 (354)
T ss_dssp CCTTCCEEESSCT-TSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTT-CT-TCEEEECCGGGGGGTCCCCSEEE
T ss_pred CCCCCEEEeCCCC-cCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcC-CC-ceEEEeCChhhCccccCCCCEEE
Confidence 3678899999999 899999988832267899999999999999999998855 54 89999999998765557799999
Q ss_pred EcCcCCCCHH-------HHHHHHHHHHhccccCcEEEEEeccc--hhhhcCCCCCCCCCCCcEEEEEEcC-CCceeeEEE
Q 039591 208 LAALVGMSKE-------EKMKIIRHIRKYMKDGGILLVRSAKG--ARAFLYPVVERHDLLDFEVLSIFHP-IDEVINSVI 277 (284)
Q Consensus 208 ~~~~~~~~~~-------~k~~~l~~~~~~L~pGG~lv~~~~~g--~~~~lyp~v~~~~l~gf~~~~~~~p-~~~v~nsvi 277 (284)
++.+.+.... ....+++.+.+.|+|||.+++.+.+. .+.+. . .||+......- .+...-.++
T Consensus 278 ~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~~~~~~~~-------~-~g~~~~~~~~l~~g~l~~~i~ 349 (354)
T 3tma_A 278 ANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRPALLKRAL-------P-PGFALRHARVVEQGGVYPRVF 349 (354)
T ss_dssp ECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCHHHHHHHC-------C-TTEEEEEEEECCBTTBCCEEE
T ss_pred ECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHh-------h-cCcEEEEEEEEEeCCEEEEEE
Confidence 9987654321 12678999999999999999877433 12222 2 56776654332 333333455
Q ss_pred EEee
Q 039591 278 LVRK 281 (284)
Q Consensus 278 ~~rk 281 (284)
+.+|
T Consensus 350 vl~r 353 (354)
T 3tma_A 350 VLEK 353 (354)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 5554
No 106
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.44 E-value=3.1e-13 Score=119.29 Aligned_cols=109 Identities=17% Similarity=0.241 Sum_probs=87.4
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhh---ccCCCCCeEEEEcchhhhhc-------
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVAT---DFEFEKRMKFLTGDILQVKE------- 198 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~---~~~l~~~v~~~~~D~~~~~~------- 198 (284)
.++.+|||+||| .|..++.+++ ..++.+|+++|+++.+++.|+++++. .+ +.++++++++|+.+...
T Consensus 35 ~~~~~VLDlG~G-~G~~~l~la~-~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~-l~~~v~~~~~D~~~~~~~~~~~~~ 111 (260)
T 2ozv_A 35 DRACRIADLGAG-AGAAGMAVAA-RLEKAEVTLYERSQEMAEFARRSLELPDNAA-FSARIEVLEADVTLRAKARVEAGL 111 (260)
T ss_dssp CSCEEEEECCSS-SSHHHHHHHH-HCTTEEEEEEESSHHHHHHHHHHTTSGGGTT-TGGGEEEEECCTTCCHHHHHHTTC
T ss_pred cCCCEEEEeCCh-HhHHHHHHHH-hCCCCeEEEEECCHHHHHHHHHHHHhhhhCC-CcceEEEEeCCHHHHhhhhhhhcc
Confidence 567899999999 8999999998 56788999999999999999999876 44 55679999999987522
Q ss_pred cCCCccEEEEcCcCCCC-----------------HHHHHHHHHHHHhccccCcEEEEEe
Q 039591 199 KLGEYDCIFLAALVGMS-----------------KEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 199 ~l~~fD~V~~~~~~~~~-----------------~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
..+.||+|+++.+.... ......+++.+.+.|+|||++++..
T Consensus 112 ~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 112 PDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp CTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 12689999998654211 0124678999999999999998765
No 107
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.44 E-value=9.4e-14 Score=116.88 Aligned_cols=105 Identities=13% Similarity=0.165 Sum_probs=84.6
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+|||+||| +|.+++.++. ..|+++|+++|+|+.|++.|+++++..| ...++++ +|..+.. .-++||+|+.
T Consensus 48 ~~~~~VLDlGCG-~GplAl~l~~-~~p~a~~~A~Di~~~~leiar~~~~~~g-~~~~v~~--~d~~~~~-~~~~~DvVLa 121 (200)
T 3fzg_A 48 KHVSSILDFGCG-FNPLALYQWN-ENEKIIYHAYDIDRAEIAFLSSIIGKLK-TTIKYRF--LNKESDV-YKGTYDVVFL 121 (200)
T ss_dssp CCCSEEEEETCT-THHHHHHHHC-SSCCCEEEEECSCHHHHHHHHHHHHHSC-CSSEEEE--ECCHHHH-TTSEEEEEEE
T ss_pred CCCCeEEEecCC-CCHHHHHHHh-cCCCCEEEEEeCCHHHHHHHHHHHHhcC-CCccEEE--ecccccC-CCCCcChhhH
Confidence 568899999999 9999999987 5688999999999999999999998755 4446666 6655432 2377999998
Q ss_pred cCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 209 AALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
....+.- ++.+..+..+.+.|+|||++|-..
T Consensus 122 ~k~LHlL-~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 122 LKMLPVL-KQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp ETCHHHH-HHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred hhHHHhh-hhhHHHHHHHHHHhCCCCEEEEeC
Confidence 8766544 555566668999999999998655
No 108
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.44 E-value=3.6e-13 Score=116.19 Aligned_cols=102 Identities=16% Similarity=0.262 Sum_probs=86.3
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+||||||| .|..+..+++ .+.+|+++|+|+.+++.|+++.. ..+++++++|+.+.....+.||+|++
T Consensus 52 ~~~~~vLDiG~G-~G~~~~~l~~---~~~~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~~d~~~~~~~~~~fD~v~~ 122 (242)
T 3l8d_A 52 KKEAEVLDVGCG-DGYGTYKLSR---TGYKAVGVDISEVMIQKGKERGE-----GPDLSFIKGDLSSLPFENEQFEAIMA 122 (242)
T ss_dssp CTTCEEEEETCT-TSHHHHHHHH---TTCEEEEEESCHHHHHHHHTTTC-----BTTEEEEECBTTBCSSCTTCEEEEEE
T ss_pred CCCCeEEEEcCC-CCHHHHHHHH---cCCeEEEEECCHHHHHHHHhhcc-----cCCceEEEcchhcCCCCCCCccEEEE
Confidence 577899999999 8999999998 37899999999999999998742 26799999999876444478999998
Q ss_pred cCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 209 AALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.....+. ++...+++++.+.|+|||++++..
T Consensus 123 ~~~l~~~-~~~~~~l~~~~~~L~pgG~l~i~~ 153 (242)
T 3l8d_A 123 INSLEWT-EEPLRALNEIKRVLKSDGYACIAI 153 (242)
T ss_dssp ESCTTSS-SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cChHhhc-cCHHHHHHHHHHHhCCCeEEEEEE
Confidence 8765443 556789999999999999999876
No 109
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.44 E-value=6.2e-13 Score=112.81 Aligned_cols=104 Identities=11% Similarity=0.061 Sum_probs=82.7
Q ss_pred CCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhcc-CCCccEEEE
Q 039591 130 QPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEK-LGEYDCIFL 208 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~-l~~fD~V~~ 208 (284)
++.+|||+||| .|..++.+++ ....+|+++|+|+.+++.|+++++..+ + .+++++++|+.+.... .+.||+|++
T Consensus 54 ~~~~vLDlgcG-~G~~~~~l~~--~~~~~V~~vD~s~~~l~~a~~~~~~~~-~-~~v~~~~~D~~~~~~~~~~~fD~V~~ 128 (202)
T 2fpo_A 54 VDAQCLDCFAG-SGALGLEALS--RYAAGATLIEMDRAVSQQLIKNLATLK-A-GNARVVNSNAMSFLAQKGTPHNIVFV 128 (202)
T ss_dssp TTCEEEETTCT-TCHHHHHHHH--TTCSEEEEECSCHHHHHHHHHHHHHTT-C-CSEEEECSCHHHHHSSCCCCEEEEEE
T ss_pred CCCeEEEeCCC-cCHHHHHHHh--cCCCEEEEEECCHHHHHHHHHHHHHcC-C-CcEEEEECCHHHHHhhcCCCCCEEEE
Confidence 67899999999 8999988776 233599999999999999999988755 3 6899999999875432 268999999
Q ss_pred cCcCCCCHHHHHHHHHHHHh--ccccCcEEEEEe
Q 039591 209 AALVGMSKEEKMKIIRHIRK--YMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~~~~~~~k~~~l~~~~~--~L~pGG~lv~~~ 240 (284)
+...+. .....+++.+.+ +|+|||++++..
T Consensus 129 ~~p~~~--~~~~~~l~~l~~~~~L~pgG~l~i~~ 160 (202)
T 2fpo_A 129 DPPFRR--GLLEETINLLEDNGWLADEALIYVES 160 (202)
T ss_dssp CCSSST--TTHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred CCCCCC--CcHHHHHHHHHhcCccCCCcEEEEEE
Confidence 876431 334567777765 599999999876
No 110
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.44 E-value=9e-13 Score=112.80 Aligned_cols=107 Identities=17% Similarity=0.273 Sum_probs=87.8
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCC----CCCeEEEEcchhhhhccCCCcc
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEF----EKRMKFLTGDILQVKEKLGEYD 204 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l----~~~v~~~~~D~~~~~~~l~~fD 204 (284)
.++.+|||+||| .|..+..+++ .+.+|+++|+|+.+++.|+++....+ + ..+++++++|+.+.....+.||
T Consensus 29 ~~~~~vLdiG~G-~G~~~~~l~~---~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~D 103 (235)
T 3sm3_A 29 QEDDEILDIGCG-SGKISLELAS---KGYSVTGIDINSEAIRLAETAARSPG-LNQKTGGKAEFKVENASSLSFHDSSFD 103 (235)
T ss_dssp CTTCEEEEETCT-TSHHHHHHHH---TTCEEEEEESCHHHHHHHHHHTTCCS-CCSSSSCEEEEEECCTTSCCSCTTCEE
T ss_pred CCCCeEEEECCC-CCHHHHHHHh---CCCeEEEEECCHHHHHHHHHHHHhcC-CccccCcceEEEEecccccCCCCCcee
Confidence 578899999999 8999999998 37899999999999999999987644 2 2368999999987544447899
Q ss_pred EEEEcCcCC-C-CHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 205 CIFLAALVG-M-SKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 205 ~V~~~~~~~-~-~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+|++..... . .......+++++.+.|+|||++++..
T Consensus 104 ~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 104 FAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVE 141 (235)
T ss_dssp EEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 999876553 2 23455699999999999999999865
No 111
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.44 E-value=4.1e-13 Score=117.15 Aligned_cols=103 Identities=16% Similarity=0.217 Sum_probs=85.9
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+|||+||| .|..+..+++ .+.+|+++|+|+.+++.|++++.. ...+++++++|+.+.....+.||+|++
T Consensus 38 ~~~~~vLDiG~G-~G~~~~~l~~---~~~~v~~vD~s~~~~~~a~~~~~~---~~~~~~~~~~d~~~~~~~~~~fD~v~~ 110 (263)
T 2yqz_A 38 GEEPVFLELGVG-TGRIALPLIA---RGYRYIALDADAAMLEVFRQKIAG---VDRKVQVVQADARAIPLPDESVHGVIV 110 (263)
T ss_dssp SSCCEEEEETCT-TSTTHHHHHT---TTCEEEEEESCHHHHHHHHHHTTT---SCTTEEEEESCTTSCCSCTTCEEEEEE
T ss_pred CCCCEEEEeCCc-CCHHHHHHHH---CCCEEEEEECCHHHHHHHHHHhhc---cCCceEEEEcccccCCCCCCCeeEEEE
Confidence 678899999999 8999999997 378999999999999999998732 236899999999865433368999998
Q ss_pred cCcCCCCHHHHHHHHHHHHhccccCcEEEEE
Q 039591 209 AALVGMSKEEKMKIIRHIRKYMKDGGILLVR 239 (284)
Q Consensus 209 ~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~ 239 (284)
....++. .+...+++++.+.|+|||.+++.
T Consensus 111 ~~~l~~~-~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 111 VHLWHLV-PDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp ESCGGGC-TTHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCchhhc-CCHHHHHHHHHHHCCCCcEEEEE
Confidence 8765443 35688999999999999999876
No 112
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.43 E-value=8.5e-13 Score=117.24 Aligned_cols=109 Identities=17% Similarity=0.111 Sum_probs=89.2
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhc-cCCCccEE
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKE-KLGEYDCI 206 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~-~l~~fD~V 206 (284)
..++.+|||+||| .|..+..+++ .+..+|+++|+|+.+++.|+++....+ +..+++++++|+.+... ..+.||+|
T Consensus 62 ~~~~~~vLDiGcG-~G~~~~~l~~--~~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~~fD~v 137 (298)
T 1ri5_A 62 TKRGDSVLDLGCG-KGGDLLKYER--AGIGEYYGVDIAEVSINDARVRARNMK-RRFKVFFRAQDSYGRHMDLGKEFDVI 137 (298)
T ss_dssp CCTTCEEEEETCT-TTTTHHHHHH--HTCSEEEEEESCHHHHHHHHHHHHTSC-CSSEEEEEESCTTTSCCCCSSCEEEE
T ss_pred CCCCCeEEEECCC-CCHHHHHHHH--CCCCEEEEEECCHHHHHHHHHHHHhcC-CCccEEEEECCccccccCCCCCcCEE
Confidence 3678899999999 7877777887 245699999999999999999987644 44679999999987543 23689999
Q ss_pred EEcCcCC---CCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 207 FLAALVG---MSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 207 ~~~~~~~---~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
++....+ ...++...+++++.+.|+|||++++..
T Consensus 138 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 138 SSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTV 174 (298)
T ss_dssp EEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 9876543 235778899999999999999999876
No 113
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.43 E-value=6.9e-13 Score=113.55 Aligned_cols=104 Identities=12% Similarity=0.098 Sum_probs=80.5
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhh---ccCCCcc
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVK---EKLGEYD 204 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~---~~l~~fD 204 (284)
..++.+|||+||| .|..+..+++ ..++++|+++|+|+.+++.+.+..+.. .++.++.+|+.+.. ...+.||
T Consensus 55 ~~~g~~VLDlGcG-tG~~~~~la~-~~~~~~V~gvD~s~~~l~~~~~~a~~~----~~v~~~~~d~~~~~~~~~~~~~fD 128 (210)
T 1nt2_A 55 LRGDERVLYLGAA-SGTTVSHLAD-IVDEGIIYAVEYSAKPFEKLLELVRER----NNIIPLLFDASKPWKYSGIVEKVD 128 (210)
T ss_dssp CCSSCEEEEETCT-TSHHHHHHHH-HTTTSEEEEECCCHHHHHHHHHHHHHC----SSEEEECSCTTCGGGTTTTCCCEE
T ss_pred CCCCCEEEEECCc-CCHHHHHHHH-HcCCCEEEEEECCHHHHHHHHHHHhcC----CCeEEEEcCCCCchhhccccccee
Confidence 3678899999999 8988888888 445679999999999987777665542 46899999987631 1127899
Q ss_pred EEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 205 CIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 205 ~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+|+++... ..+...+++++.+.|||||++++..
T Consensus 129 ~V~~~~~~---~~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 129 LIYQDIAQ---KNQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp EEEECCCS---TTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEeccC---hhHHHHHHHHHHHHhCCCCEEEEEE
Confidence 99988432 2344556899999999999999874
No 114
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.43 E-value=6.4e-13 Score=114.60 Aligned_cols=102 Identities=13% Similarity=0.213 Sum_probs=84.3
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCc-EEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKAT-HFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIF 207 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~-~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~ 207 (284)
.++.+||||||| .|..+..+++ .+. +|+++|+|+.+++.|+++... .+++++++|+.+.....+.||+|+
T Consensus 42 ~~~~~vLdiG~G-~G~~~~~l~~---~~~~~v~~vD~s~~~~~~a~~~~~~-----~~~~~~~~d~~~~~~~~~~fD~v~ 112 (243)
T 3bkw_A 42 VGGLRIVDLGCG-FGWFCRWAHE---HGASYVLGLDLSEKMLARARAAGPD-----TGITYERADLDKLHLPQDSFDLAY 112 (243)
T ss_dssp CTTCEEEEETCT-TCHHHHHHHH---TTCSEEEEEESCHHHHHHHHHTSCS-----SSEEEEECCGGGCCCCTTCEEEEE
T ss_pred cCCCEEEEEcCc-CCHHHHHHHH---CCCCeEEEEcCCHHHHHHHHHhccc-----CCceEEEcChhhccCCCCCceEEE
Confidence 578899999999 8988989988 245 999999999999999987543 479999999987543347899999
Q ss_pred EcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 208 LAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 208 ~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+....+.. ++...+++++.+.|+|||++++..
T Consensus 113 ~~~~l~~~-~~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 113 SSLALHYV-EDVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp EESCGGGC-SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred Eecccccc-chHHHHHHHHHHhcCcCcEEEEEe
Confidence 87655333 356799999999999999999865
No 115
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.43 E-value=1.3e-12 Score=120.60 Aligned_cols=108 Identities=13% Similarity=0.204 Sum_probs=90.3
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC-CCccEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL-GEYDCIF 207 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l-~~fD~V~ 207 (284)
..+.+||||||| .|..+..+++ ..|+.+++++|+ |.+++.|+++++..+ +.++++|+.+|+.+...++ ++||+|+
T Consensus 178 ~~~~~vlDvG~G-~G~~~~~l~~-~~p~~~~~~~D~-~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~~p~~~D~v~ 253 (363)
T 3dp7_A 178 HHPKRLLDIGGN-TGKWATQCVQ-YNKEVEVTIVDL-PQQLEMMRKQTAGLS-GSERIHGHGANLLDRDVPFPTGFDAVW 253 (363)
T ss_dssp GCCSEEEEESCT-TCHHHHHHHH-HSTTCEEEEEEC-HHHHHHHHHHHTTCT-TGGGEEEEECCCCSSSCCCCCCCSEEE
T ss_pred cCCCEEEEeCCC-cCHHHHHHHH-hCCCCEEEEEeC-HHHHHHHHHHHHhcC-cccceEEEEccccccCCCCCCCcCEEE
Confidence 567899999999 8999999998 578999999999 999999999987744 5578999999998631012 6899999
Q ss_pred EcCcCC-CCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 208 LAALVG-MSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 208 ~~~~~~-~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+....+ +..++..++++++.+.|+|||+|++..
T Consensus 254 ~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 254 MSQFLDCFSEEEVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp EESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred EechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 887664 455666899999999999999998865
No 116
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.43 E-value=1.3e-12 Score=119.95 Aligned_cols=104 Identities=22% Similarity=0.253 Sum_probs=84.8
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+||||||| .|..++.+++ .+..+|+++|+|+ +++.|+++++..+ +.++++++++|+.+...+.++||+|++
T Consensus 63 ~~~~~VLDiGcG-tG~ls~~la~--~g~~~v~gvD~s~-~~~~a~~~~~~~~-~~~~i~~~~~d~~~~~~~~~~~D~Ivs 137 (340)
T 2fyt_A 63 FKDKVVLDVGCG-TGILSMFAAK--AGAKKVLGVDQSE-ILYQAMDIIRLNK-LEDTITLIKGKIEEVHLPVEKVDVIIS 137 (340)
T ss_dssp TTTCEEEEETCT-TSHHHHHHHH--TTCSEEEEEESST-HHHHHHHHHHHTT-CTTTEEEEESCTTTSCCSCSCEEEEEE
T ss_pred cCCCEEEEeecc-CcHHHHHHHH--cCCCEEEEEChHH-HHHHHHHHHHHcC-CCCcEEEEEeeHHHhcCCCCcEEEEEE
Confidence 678899999999 8999999998 2445999999997 9999999987744 667899999999875433368999998
Q ss_pred cCc--CCCCHHHHHHHHHHHHhccccCcEEE
Q 039591 209 AAL--VGMSKEEKMKIIRHIRKYMKDGGILL 237 (284)
Q Consensus 209 ~~~--~~~~~~~k~~~l~~~~~~L~pGG~lv 237 (284)
... ......+...+++.+.+.|||||+++
T Consensus 138 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 138 EWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp CCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred cCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 752 12223456789999999999999998
No 117
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.43 E-value=1.8e-12 Score=115.42 Aligned_cols=106 Identities=18% Similarity=0.223 Sum_probs=85.0
Q ss_pred CCCCeEEEecCCCC---hHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhh--------
Q 039591 129 VQPKKVAFVGSGPM---PLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVK-------- 197 (284)
Q Consensus 129 ~~~~~VL~iGsGp~---G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~-------- 197 (284)
....+||||||| . |..+..+++ ..++.+|+++|+||.+++.|++++.. ..+++|+++|+.+..
T Consensus 76 ~~~~~vLDlGcG-~pt~G~~~~~~~~-~~p~~~v~~vD~sp~~l~~Ar~~~~~----~~~v~~~~~D~~~~~~~~~~~~~ 149 (274)
T 2qe6_A 76 AGISQFLDLGSG-LPTVQNTHEVAQS-VNPDARVVYVDIDPMVLTHGRALLAK----DPNTAVFTADVRDPEYILNHPDV 149 (274)
T ss_dssp TCCCEEEEETCC-SCCSSCHHHHHHH-HCTTCEEEEEESSHHHHHHHHHHHTT----CTTEEEEECCTTCHHHHHHSHHH
T ss_pred cCCCEEEEECCC-CCCCChHHHHHHH-hCCCCEEEEEECChHHHHHHHHhcCC----CCCeEEEEeeCCCchhhhccchh
Confidence 345899999999 7 877666655 56889999999999999999998753 257999999997531
Q ss_pred ---ccCCCccEEEEcCcCCC-CHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 198 ---EKLGEYDCIFLAALVGM-SKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 198 ---~~l~~fD~V~~~~~~~~-~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.+..+||+|++....++ ..++...+++++.+.|+|||+|++..
T Consensus 150 ~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~ 196 (274)
T 2qe6_A 150 RRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTS 196 (274)
T ss_dssp HHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred hccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 22358999998876543 33357899999999999999999876
No 118
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.43 E-value=7.5e-13 Score=123.35 Aligned_cols=131 Identities=12% Similarity=0.158 Sum_probs=99.6
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+|||+||| .|..++.+++ .+.+|+++|+|+.+++.|+++++..+ ..++|+++|+.+...+.+.||+|++
T Consensus 232 ~~~~~VLDlGcG-~G~~~~~la~---~g~~V~gvDis~~al~~A~~n~~~~~---~~v~~~~~D~~~~~~~~~~fD~Ii~ 304 (381)
T 3dmg_A 232 VRGRQVLDLGAG-YGALTLPLAR---MGAEVVGVEDDLASVLSLQKGLEANA---LKAQALHSDVDEALTEEARFDIIVT 304 (381)
T ss_dssp TTTCEEEEETCT-TSTTHHHHHH---TTCEEEEEESBHHHHHHHHHHHHHTT---CCCEEEECSTTTTSCTTCCEEEEEE
T ss_pred CCCCEEEEEeee-CCHHHHHHHH---cCCEEEEEECCHHHHHHHHHHHHHcC---CCeEEEEcchhhccccCCCeEEEEE
Confidence 367899999999 8999999998 37899999999999999999988744 3489999999876544478999999
Q ss_pred cCcCCC----CHHHHHHHHHHHHhccccCcEEEEEeccch--hh---hcCCCCCCCCCCCcEEEEEE
Q 039591 209 AALVGM----SKEEKMKIIRHIRKYMKDGGILLVRSAKGA--RA---FLYPVVERHDLLDFEVLSIF 266 (284)
Q Consensus 209 ~~~~~~----~~~~k~~~l~~~~~~L~pGG~lv~~~~~g~--~~---~lyp~v~~~~l~gf~~~~~~ 266 (284)
+...+. ..+....+++++.++|+|||++++...... .. -.|..+..-.-.||.++...
T Consensus 305 npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~~~~l~~~f~~v~~l~~~gF~Vl~a~ 371 (381)
T 3dmg_A 305 NPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFLKYEPLLEEKFGAFQTLKVAEYKVLFAE 371 (381)
T ss_dssp CCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTTSCHHHHHHHHHSCCEEEEESSSEEEEEE
T ss_pred CCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCCCChHHHHHHhhccEEEEeCCCEEEEEEE
Confidence 876543 236678999999999999999998652211 11 11232222223789988654
No 119
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.43 E-value=5.7e-13 Score=120.50 Aligned_cols=110 Identities=18% Similarity=0.302 Sum_probs=85.8
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhc-cCC-CCCeEEEEcchhhhhcc-CCCccE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATD-FEF-EKRMKFLTGDILQVKEK-LGEYDC 205 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~-~~l-~~~v~~~~~D~~~~~~~-l~~fD~ 205 (284)
..+++||||||| .|..++.+++ +.+..+|+++|+|+.+++.|++++... .++ ..+++++.+|+.+.... .++||+
T Consensus 94 ~~~~~VLdiG~G-~G~~~~~l~~-~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~ 171 (304)
T 2o07_A 94 PNPRKVLIIGGG-DGGVLREVVK-HPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDV 171 (304)
T ss_dssp SSCCEEEEEECT-TSHHHHHHTT-CTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEE
T ss_pred CCCCEEEEECCC-chHHHHHHHH-cCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceE
Confidence 567899999999 9999999998 456689999999999999999987642 112 47899999999875433 268999
Q ss_pred EEEcCcCCCCHH---HHHHHHHHHHhccccCcEEEEEe
Q 039591 206 IFLAALVGMSKE---EKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 206 V~~~~~~~~~~~---~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|+++......+. ...++++++.+.|+|||++++..
T Consensus 172 Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 172 IITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 999875422111 23578999999999999999876
No 120
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.43 E-value=6.7e-13 Score=120.50 Aligned_cols=149 Identities=19% Similarity=0.209 Sum_probs=103.1
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccC--C-CCCeEEEEcchhhhhcc-CCCcc
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFE--F-EKRMKFLTGDILQVKEK-LGEYD 204 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~--l-~~~v~~~~~D~~~~~~~-l~~fD 204 (284)
..+++||||||| .|..+..+++ +.++.+|+++|+|+.+++.|++++..++. + ..+++++.+|+.+.... .++||
T Consensus 76 ~~~~~VLdiG~G-~G~~~~~l~~-~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD 153 (314)
T 1uir_A 76 PEPKRVLIVGGG-EGATLREVLK-HPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYD 153 (314)
T ss_dssp SCCCEEEEEECT-TSHHHHHHTT-STTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEE
T ss_pred CCCCeEEEEcCC-cCHHHHHHHh-cCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCcc
Confidence 567899999999 8999999998 55678999999999999999998764211 1 36899999999875432 36899
Q ss_pred EEEEcCcCCC---CHHH---HHHHHHHHHhccccCcEEEEEeccchhhhcCCCCCCC---CC-CCcEEE---EEEcCCCc
Q 039591 205 CIFLAALVGM---SKEE---KMKIIRHIRKYMKDGGILLVRSAKGARAFLYPVVERH---DL-LDFEVL---SIFHPIDE 271 (284)
Q Consensus 205 ~V~~~~~~~~---~~~~---k~~~l~~~~~~L~pGG~lv~~~~~g~~~~lyp~v~~~---~l-~gf~~~---~~~~p~~~ 271 (284)
+|+++...+. .+.. ..++++.+.+.|+|||++++....... ..+..-.. .+ .-|..+ ....|...
T Consensus 154 ~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~--~~~~~~~~~~~~l~~~F~~v~~~~~~vP~~~ 231 (314)
T 1uir_A 154 VVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILL--THHRVHPVVHRTVREAFRYVRSYKNHIPGFF 231 (314)
T ss_dssp EEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC-----CHHHHHHHHHHTTCSEEEEEEEEEGGGT
T ss_pred EEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCccc--cCHHHHHHHHHHHHHHCCceEEEEEecCCCC
Confidence 9999875533 1111 368999999999999999987521100 00000000 01 224333 33457666
Q ss_pred eeeEEEEEee
Q 039591 272 VINSVILVRK 281 (284)
Q Consensus 272 v~nsvi~~rk 281 (284)
-.|+.++++|
T Consensus 232 g~~~~~~as~ 241 (314)
T 1uir_A 232 LNFGFLLASD 241 (314)
T ss_dssp EEEEEEEEES
T ss_pred CeEEEEEEEC
Confidence 6778888887
No 121
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.43 E-value=2e-12 Score=111.59 Aligned_cols=145 Identities=9% Similarity=0.118 Sum_probs=100.8
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhh---ccCCCcc
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVK---EKLGEYD 204 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~---~~l~~fD 204 (284)
..++.+|||+||| .|..+..+++...++.+|+++|+|+.+++.+.++++.. .+++++++|+.+.. ...+.||
T Consensus 75 ~~~~~~vLDlG~G-~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~----~~v~~~~~d~~~~~~~~~~~~~~D 149 (233)
T 2ipx_A 75 IKPGAKVLYLGAA-SGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR----TNIIPVIEDARHPHKYRMLIAMVD 149 (233)
T ss_dssp CCTTCEEEEECCT-TSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC----TTEEEECSCTTCGGGGGGGCCCEE
T ss_pred CCCCCEEEEEccc-CCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc----CCeEEEEcccCChhhhcccCCcEE
Confidence 3678899999999 89999999983335689999999999988888877652 57999999998632 1236899
Q ss_pred EEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEeccchhhhc------CCCCCCCCC--CCcEEEEEE--cCCCceee
Q 039591 205 CIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRSAKGARAFL------YPVVERHDL--LDFEVLSIF--HPIDEVIN 274 (284)
Q Consensus 205 ~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~~g~~~~l------yp~v~~~~l--~gf~~~~~~--~p~~~v~n 274 (284)
+|+++... +.....++.++.+.|||||++++.......... +.. +...+ .||+++... .|.+. -.
T Consensus 150 ~V~~~~~~---~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~-~~~~l~~~Gf~~~~~~~~~~~~~-~~ 224 (233)
T 2ipx_A 150 VIFADVAQ---PDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFAS-EVKKMQQENMKPQEQLTLEPYER-DH 224 (233)
T ss_dssp EEEECCCC---TTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHH-HHHTTGGGTEEEEEEEECTTTSS-SE
T ss_pred EEEEcCCC---ccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHH-HHHHHHHCCCceEEEEecCCccC-Cc
Confidence 99997652 234456788899999999999984321100000 110 01123 599998753 34433 24
Q ss_pred EEEEEeec
Q 039591 275 SVILVRKP 282 (284)
Q Consensus 275 svi~~rk~ 282 (284)
.+++++++
T Consensus 225 ~~v~~~~~ 232 (233)
T 2ipx_A 225 AVVVGVYR 232 (233)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEeC
Confidence 57777764
No 122
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.43 E-value=4e-13 Score=119.75 Aligned_cols=110 Identities=19% Similarity=0.249 Sum_probs=87.3
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhcc-CC-CCCeEEEEcchhhhhccC-CCccE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDF-EF-EKRMKFLTGDILQVKEKL-GEYDC 205 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~-~l-~~~v~~~~~D~~~~~~~l-~~fD~ 205 (284)
..+++||||||| .|..+..+++ +.+..+|+++|+|+.+++.|++++..++ .+ ..+++++.+|+.+..... ++||+
T Consensus 74 ~~~~~VLdiG~G-~G~~~~~l~~-~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~ 151 (275)
T 1iy9_A 74 PNPEHVLVVGGG-DGGVIREILK-HPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDV 151 (275)
T ss_dssp SSCCEEEEESCT-TCHHHHHHTT-CTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEE
T ss_pred CCCCEEEEECCc-hHHHHHHHHh-CCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeE
Confidence 467899999999 9999999988 4456899999999999999999875421 12 468999999998754332 68999
Q ss_pred EEEcCcCCCCHH---HHHHHHHHHHhccccCcEEEEEe
Q 039591 206 IFLAALVGMSKE---EKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 206 V~~~~~~~~~~~---~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|+++......+. ...++++.+.+.|+|||++++..
T Consensus 152 Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 152 IMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp EEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred EEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 999875422111 12679999999999999999975
No 123
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.43 E-value=4.2e-13 Score=115.64 Aligned_cols=100 Identities=14% Similarity=0.261 Sum_probs=83.4
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+||||||| .|..+..+++ .+.+|+++|+|+.+++.|++... .+++++++|+.+. ...+.||+|++
T Consensus 41 ~~~~~vLDiGcG-~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~~------~~v~~~~~d~~~~-~~~~~fD~v~~ 109 (250)
T 2p7i_A 41 FRPGNLLELGSF-KGDFTSRLQE---HFNDITCVEASEEAISHAQGRLK------DGITYIHSRFEDA-QLPRRYDNIVL 109 (250)
T ss_dssp CCSSCEEEESCT-TSHHHHHHTT---TCSCEEEEESCHHHHHHHHHHSC------SCEEEEESCGGGC-CCSSCEEEEEE
T ss_pred cCCCcEEEECCC-CCHHHHHHHH---hCCcEEEEeCCHHHHHHHHHhhh------CCeEEEEccHHHc-CcCCcccEEEE
Confidence 467899999999 8999999987 35689999999999999998753 2799999999875 23378999998
Q ss_pred cCcCCCCHHHHHHHHHHHH-hccccCcEEEEEe
Q 039591 209 AALVGMSKEEKMKIIRHIR-KYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~~~~~~~k~~~l~~~~-~~L~pGG~lv~~~ 240 (284)
.....+. ++...+++++. +.|||||++++..
T Consensus 110 ~~~l~~~-~~~~~~l~~~~~~~LkpgG~l~i~~ 141 (250)
T 2p7i_A 110 THVLEHI-DDPVALLKRINDDWLAEGGRLFLVC 141 (250)
T ss_dssp ESCGGGC-SSHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhHHHhh-cCHHHHHHHHHHHhcCCCCEEEEEc
Confidence 8765433 34579999999 9999999999876
No 124
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.42 E-value=9.3e-13 Score=114.43 Aligned_cols=106 Identities=13% Similarity=0.148 Sum_probs=87.3
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEE
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIF 207 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~ 207 (284)
..++.+||||||| .|..+..+++. ...+|+++|+|+.+++.|+++.... .+++++++|+.+.....+.||+|+
T Consensus 91 ~~~~~~vLDiG~G-~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~d~~~~~~~~~~fD~v~ 163 (254)
T 1xtp_A 91 GHGTSRALDCGAG-IGRITKNLLTK--LYATTDLLEPVKHMLEEAKRELAGM----PVGKFILASMETATLPPNTYDLIV 163 (254)
T ss_dssp TCCCSEEEEETCT-TTHHHHHTHHH--HCSEEEEEESCHHHHHHHHHHTTTS----SEEEEEESCGGGCCCCSSCEEEEE
T ss_pred ccCCCEEEEECCC-cCHHHHHHHHh--hcCEEEEEeCCHHHHHHHHHHhccC----CceEEEEccHHHCCCCCCCeEEEE
Confidence 3578899999999 89988888872 2567999999999999999987642 579999999987543347899999
Q ss_pred EcCcC-CCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 208 LAALV-GMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 208 ~~~~~-~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+.... +...++...+++++.+.|||||++++..
T Consensus 164 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 197 (254)
T 1xtp_A 164 IQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKE 197 (254)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 87654 3344677899999999999999999876
No 125
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.42 E-value=7e-13 Score=118.49 Aligned_cols=108 Identities=18% Similarity=0.260 Sum_probs=85.7
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhcc-CC--------CCCeEEEEcchhhhhcc
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDF-EF--------EKRMKFLTGDILQVKEK 199 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~-~l--------~~~v~~~~~D~~~~~~~ 199 (284)
..+.+||||||| .|..+..+++ + +..+|+++|+|+.+++.|++++ ... ++ ..+++++.+|+.+....
T Consensus 74 ~~~~~VLdiG~G-~G~~~~~l~~-~-~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~ 149 (281)
T 1mjf_A 74 PKPKRVLVIGGG-DGGTVREVLQ-H-DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN 149 (281)
T ss_dssp SCCCEEEEEECT-TSHHHHHHTT-S-CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH
T ss_pred CCCCeEEEEcCC-cCHHHHHHHh-C-CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc
Confidence 567899999999 8999999998 4 6789999999999999999987 431 12 36899999999775322
Q ss_pred CCCccEEEEcCcCCCCHHH---HHHHHHHHHhccccCcEEEEEe
Q 039591 200 LGEYDCIFLAALVGMSKEE---KMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 200 l~~fD~V~~~~~~~~~~~~---k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.++||+|+++......... ..++++.+.+.|+|||++++..
T Consensus 150 ~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 150 NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 4679999998764322111 2689999999999999999875
No 126
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.42 E-value=6.9e-13 Score=120.84 Aligned_cols=110 Identities=21% Similarity=0.282 Sum_probs=87.3
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhc-cCC-CCCeEEEEcchhhhhcc-CCCccE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATD-FEF-EKRMKFLTGDILQVKEK-LGEYDC 205 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~-~~l-~~~v~~~~~D~~~~~~~-l~~fD~ 205 (284)
..+.+||||||| .|..++.+++ +.++.+|+++|+|+.+++.|++++..+ +++ ..+++++++|+.+.... .++||+
T Consensus 115 ~~~~~VLdiG~G-~G~~~~~l~~-~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDv 192 (321)
T 2pt6_A 115 KEPKNVLVVGGG-DGGIIRELCK-YKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDV 192 (321)
T ss_dssp SSCCEEEEEECT-TCHHHHHHTT-CTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEE
T ss_pred CCCCEEEEEcCC-ccHHHHHHHH-cCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceE
Confidence 567899999999 8999999998 556789999999999999999997652 112 36899999999875432 268999
Q ss_pred EEEcCcCCCCHHH---HHHHHHHHHhccccCcEEEEEe
Q 039591 206 IFLAALVGMSKEE---KMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 206 V~~~~~~~~~~~~---k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|+++......+.. ..++++.+.+.|+|||++++..
T Consensus 193 Ii~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 193 IIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp EEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 9998643221111 1689999999999999999975
No 127
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.42 E-value=3.8e-13 Score=109.65 Aligned_cols=101 Identities=9% Similarity=0.082 Sum_probs=80.7
Q ss_pred CCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC----CCccE
Q 039591 130 QPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL----GEYDC 205 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l----~~fD~ 205 (284)
++.+|||+||| .|..++.+++ .+.+|+++|+|+.+++.|+++++..+ + +++++++|+.+..... ++||+
T Consensus 41 ~~~~vLD~GcG-~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~-~--~~~~~~~d~~~~~~~~~~~~~~~D~ 113 (171)
T 1ws6_A 41 RRGRFLDPFAG-SGAVGLEAAS---EGWEAVLVEKDPEAVRLLKENVRRTG-L--GARVVALPVEVFLPEAKAQGERFTV 113 (171)
T ss_dssp TCCEEEEETCS-SCHHHHHHHH---TTCEEEEECCCHHHHHHHHHHHHHHT-C--CCEEECSCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeCCC-cCHHHHHHHH---CCCeEEEEeCCHHHHHHHHHHHHHcC-C--ceEEEeccHHHHHHhhhccCCceEE
Confidence 67899999999 8999999998 35569999999999999999988754 3 7999999998743222 37999
Q ss_pred EEEcCcCCCCHHHHHHHHHHHH--hccccCcEEEEEe
Q 039591 206 IFLAALVGMSKEEKMKIIRHIR--KYMKDGGILLVRS 240 (284)
Q Consensus 206 V~~~~~~~~~~~~k~~~l~~~~--~~L~pGG~lv~~~ 240 (284)
|+++...+ ....++++.+. +.|+|||++++..
T Consensus 114 i~~~~~~~---~~~~~~~~~~~~~~~L~~gG~~~~~~ 147 (171)
T 1ws6_A 114 AFMAPPYA---MDLAALFGELLASGLVEAGGLYVLQH 147 (171)
T ss_dssp EEECCCTT---SCTTHHHHHHHHHTCEEEEEEEEEEE
T ss_pred EEECCCCc---hhHHHHHHHHHhhcccCCCcEEEEEe
Confidence 99987543 12245566666 9999999999866
No 128
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.42 E-value=9.2e-13 Score=111.66 Aligned_cols=99 Identities=18% Similarity=0.235 Sum_probs=83.9
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+|||+||| .|..+..+++ .+.+|+++|+|+.+++.|+++. +++++++|+.+.. ..+.||+|++
T Consensus 42 ~~~~~vLDiGcG-~G~~~~~l~~---~~~~v~~vD~s~~~~~~a~~~~--------~~~~~~~d~~~~~-~~~~fD~v~~ 108 (211)
T 3e23_A 42 PAGAKILELGCG-AGYQAEAMLA---AGFDVDATDGSPELAAEASRRL--------GRPVRTMLFHQLD-AIDAYDAVWA 108 (211)
T ss_dssp CTTCEEEESSCT-TSHHHHHHHH---TTCEEEEEESCHHHHHHHHHHH--------TSCCEECCGGGCC-CCSCEEEEEE
T ss_pred CCCCcEEEECCC-CCHHHHHHHH---cCCeEEEECCCHHHHHHHHHhc--------CCceEEeeeccCC-CCCcEEEEEe
Confidence 567899999999 8999999998 4789999999999999999885 3567789988755 4478999999
Q ss_pred cCcC-CCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 209 AALV-GMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~-~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.... +...++...+++++.+.|||||++++..
T Consensus 109 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 141 (211)
T 3e23_A 109 HACLLHVPRDELADVLKLIWRALKPGGLFYASY 141 (211)
T ss_dssp CSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 8655 4445678899999999999999999876
No 129
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.42 E-value=7.9e-13 Score=118.30 Aligned_cols=110 Identities=21% Similarity=0.274 Sum_probs=88.1
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhcc-CC-CCCeEEEEcchhhhhcc-CCCccE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDF-EF-EKRMKFLTGDILQVKEK-LGEYDC 205 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~-~l-~~~v~~~~~D~~~~~~~-l~~fD~ 205 (284)
.++++||+|||| .|..+..+++ +.+..+|+++|+|+.+++.|++++...+ ++ ..+++++.+|+.+.... .++||+
T Consensus 77 ~~~~~VLdiG~G-~G~~~~~l~~-~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~ 154 (283)
T 2i7c_A 77 KEPKNVLVVGGG-DGGIIRELCK-YKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDV 154 (283)
T ss_dssp SSCCEEEEEECT-TSHHHHHHTT-CTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEE
T ss_pred CCCCeEEEEeCC-cCHHHHHHHH-cCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceE
Confidence 567899999999 8999999988 5567899999999999999999876531 01 36899999999875433 368999
Q ss_pred EEEcCcCCCCHHHH---HHHHHHHHhccccCcEEEEEe
Q 039591 206 IFLAALVGMSKEEK---MKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 206 V~~~~~~~~~~~~k---~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|+++......+... .++++.+.+.|+|||++++..
T Consensus 155 Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 155 IIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp EEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 99976543222222 689999999999999999875
No 130
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.41 E-value=1e-12 Score=118.38 Aligned_cols=110 Identities=18% Similarity=0.242 Sum_probs=84.9
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhc-cCC-CCCeEEEEcchhhhhccC-CCccE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATD-FEF-EKRMKFLTGDILQVKEKL-GEYDC 205 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~-~~l-~~~v~~~~~D~~~~~~~l-~~fD~ 205 (284)
..+.+||||||| .|..+..+++ +.+..+|+++|+|+.+++.|++++..+ +++ ..+++++.+|+.+..... ++||+
T Consensus 89 ~~~~~VLdiG~G-~G~~~~~l~~-~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~ 166 (296)
T 1inl_A 89 PNPKKVLIIGGG-DGGTLREVLK-HDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDV 166 (296)
T ss_dssp SSCCEEEEEECT-TCHHHHHHTT-STTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEE
T ss_pred CCCCEEEEEcCC-cCHHHHHHHh-cCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceE
Confidence 567899999999 8999999998 456789999999999999999987542 112 368999999998754332 67999
Q ss_pred EEEcCcCC-CCHH---HHHHHHHHHHhccccCcEEEEEe
Q 039591 206 IFLAALVG-MSKE---EKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 206 V~~~~~~~-~~~~---~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|+++.... .... ...++++.+.+.|+|||++++..
T Consensus 167 Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 167 IIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp EEEEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 99876432 1111 12689999999999999999975
No 131
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.41 E-value=1.3e-12 Score=113.87 Aligned_cols=109 Identities=12% Similarity=0.143 Sum_probs=83.2
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhc-----cCCCCCeEEEEcchhh-hh--ccC
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATD-----FEFEKRMKFLTGDILQ-VK--EKL 200 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~-----~~l~~~v~~~~~D~~~-~~--~~l 200 (284)
.++.+||||||| .|..++.+|+ ..++..|+|+|+|+.+++.|+++++.+ .++ .+++++++|+.+ .. .+.
T Consensus 45 ~~~~~vLDiGcG-~G~~~~~la~-~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~-~nv~~~~~d~~~~l~~~~~~ 121 (235)
T 3ckk_A 45 QAQVEFADIGCG-YGGLLVELSP-LFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGF-QNIACLRSNAMKHLPNFFYK 121 (235)
T ss_dssp -CCEEEEEETCT-TCHHHHHHGG-GSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCC-TTEEEEECCTTTCHHHHCCT
T ss_pred CCCCeEEEEccC-CcHHHHHHHH-HCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCC-CeEEEEECcHHHhhhhhCCC
Confidence 456789999999 8999999998 568899999999999999999886542 212 579999999986 32 223
Q ss_pred CCccEEEEcCcCCCCH--HHH-----HHHHHHHHhccccCcEEEEEe
Q 039591 201 GEYDCIFLAALVGMSK--EEK-----MKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 201 ~~fD~V~~~~~~~~~~--~~k-----~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+.||.|++.....+.. ..| ..+++.+.+.|||||.|++.+
T Consensus 122 ~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 122 GQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTIT 168 (235)
T ss_dssp TCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEe
Confidence 7899998764332211 011 479999999999999999876
No 132
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.41 E-value=1.3e-12 Score=110.28 Aligned_cols=106 Identities=9% Similarity=0.182 Sum_probs=84.8
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+|||+||| .|..+..+++ . ...+|+++|+|+.+++.|+++... ..+++++++|+.+.....+.||+|++
T Consensus 41 ~~~~~vLdiGcG-~G~~~~~l~~-~-~~~~v~~~D~s~~~~~~a~~~~~~----~~~i~~~~~d~~~~~~~~~~fD~v~~ 113 (215)
T 2pxx_A 41 RPEDRILVLGCG-NSALSYELFL-G-GFPNVTSVDYSSVVVAAMQACYAH----VPQLRWETMDVRKLDFPSASFDVVLE 113 (215)
T ss_dssp CTTCCEEEETCT-TCSHHHHHHH-T-TCCCEEEEESCHHHHHHHHHHTTT----CTTCEEEECCTTSCCSCSSCEEEEEE
T ss_pred CCCCeEEEECCC-CcHHHHHHHH-c-CCCcEEEEeCCHHHHHHHHHhccc----CCCcEEEEcchhcCCCCCCcccEEEE
Confidence 677899999999 7998989988 2 223899999999999999998764 25799999999875333368999998
Q ss_pred cCcCC-C-------------CHHHHHHHHHHHHhccccCcEEEEEec
Q 039591 209 AALVG-M-------------SKEEKMKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 209 ~~~~~-~-------------~~~~k~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
....+ . ...+...+++++.+.|+|||++++...
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 160 (215)
T 2pxx_A 114 KGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTS 160 (215)
T ss_dssp ESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred CcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeC
Confidence 65331 0 134668999999999999999998773
No 133
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.41 E-value=1.1e-12 Score=111.06 Aligned_cols=101 Identities=15% Similarity=0.166 Sum_probs=84.3
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+|||+||| .|..+..+++ .+.+|+++|+|+.+++.|++. + . .+++++++|+.+. ...+.||+|++
T Consensus 45 ~~~~~vLdiG~G-~G~~~~~l~~---~~~~v~~~D~s~~~~~~a~~~----~-~-~~~~~~~~d~~~~-~~~~~~D~v~~ 113 (218)
T 3ou2_A 45 NIRGDVLELASG-TGYWTRHLSG---LADRVTALDGSAEMIAEAGRH----G-L-DNVEFRQQDLFDW-TPDRQWDAVFF 113 (218)
T ss_dssp TSCSEEEEESCT-TSHHHHHHHH---HSSEEEEEESCHHHHHHHGGG----C-C-TTEEEEECCTTSC-CCSSCEEEEEE
T ss_pred CCCCeEEEECCC-CCHHHHHHHh---cCCeEEEEeCCHHHHHHHHhc----C-C-CCeEEEecccccC-CCCCceeEEEE
Confidence 566799999999 8999999998 278999999999999999981 3 2 5799999999875 34478999998
Q ss_pred cCcC-CCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 209 AALV-GMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~-~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.... +...++...+++++.+.|+|||.+++..
T Consensus 114 ~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 146 (218)
T 3ou2_A 114 AHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVD 146 (218)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred echhhcCCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 8755 3344446899999999999999999875
No 134
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.41 E-value=9.8e-13 Score=122.30 Aligned_cols=134 Identities=14% Similarity=0.143 Sum_probs=97.4
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCC--CeEEEEcchhhhhccCCCccEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEK--RMKFLTGDILQVKEKLGEYDCI 206 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~--~v~~~~~D~~~~~~~l~~fD~V 206 (284)
.++.+|||+||| .|..++.+++ ..|+.+|+++|+|+.+++.|+++++..+ +.. +++|+.+|+.+.. ..+.||+|
T Consensus 221 ~~~~~VLDlGcG-~G~~s~~la~-~~p~~~V~gvD~s~~al~~Ar~n~~~ng-l~~~~~v~~~~~D~~~~~-~~~~fD~I 296 (375)
T 4dcm_A 221 NLEGEIVDLGCG-NGVIGLTLLD-KNPQAKVVFVDESPMAVASSRLNVETNM-PEALDRCEFMINNALSGV-EPFRFNAV 296 (375)
T ss_dssp SCCSEEEEETCT-TCHHHHHHHH-HCTTCEEEEEESCHHHHHHHHHHHHHHC-GGGGGGEEEEECSTTTTC-CTTCEEEE
T ss_pred cCCCeEEEEeCc-chHHHHHHHH-HCCCCEEEEEECcHHHHHHHHHHHHHcC-CCcCceEEEEechhhccC-CCCCeeEE
Confidence 556899999999 9999999998 5678999999999999999999988754 332 5889999998732 23689999
Q ss_pred EEcCcCCC----CHHHHHHHHHHHHhccccCcEEEEEec--cchhhh---cCCCCCCC-CCCCcEEEEEE
Q 039591 207 FLAALVGM----SKEEKMKIIRHIRKYMKDGGILLVRSA--KGARAF---LYPVVERH-DLLDFEVLSIF 266 (284)
Q Consensus 207 ~~~~~~~~----~~~~k~~~l~~~~~~L~pGG~lv~~~~--~g~~~~---lyp~v~~~-~l~gf~~~~~~ 266 (284)
+++.+.+. ......++++++.+.|+|||++++... .+.... .|..++.- .-.||.++...
T Consensus 297 i~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~~~~~~l~~~fg~~~~~a~~~~F~V~~~~ 366 (375)
T 4dcm_A 297 LCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAV 366 (375)
T ss_dssp EECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEETTSCHHHHHHHHHSCCEEEEECSSEEEEEEE
T ss_pred EECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECCcCHHHHHHHhcCCEEEEeeCCCEEEEEEc
Confidence 99876542 122345789999999999999988552 111111 22322221 23688887653
No 135
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.40 E-value=1.4e-12 Score=118.53 Aligned_cols=103 Identities=19% Similarity=0.301 Sum_probs=87.2
Q ss_pred CeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEEcCc
Q 039591 132 KKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFLAAL 211 (284)
Q Consensus 132 ~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~~~~ 211 (284)
.+|||+||| .|..+..+++ ..|+.+++++|+ +.+++.|++++...+ +..+++|+.+|+.+ ..+ ++||+|++...
T Consensus 169 ~~vlDvG~G-~G~~~~~l~~-~~p~~~~~~~D~-~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~-~~~-~~~D~v~~~~v 242 (334)
T 2ip2_A 169 RSFVDVGGG-SGELTKAILQ-AEPSARGVMLDR-EGSLGVARDNLSSLL-AGERVSLVGGDMLQ-EVP-SNGDIYLLSRI 242 (334)
T ss_dssp CEEEEETCT-TCHHHHHHHH-HCTTCEEEEEEC-TTCTHHHHHHTHHHH-HTTSEEEEESCTTT-CCC-SSCSEEEEESC
T ss_pred CEEEEeCCC-chHHHHHHHH-HCCCCEEEEeCc-HHHHHHHHHHHhhcC-CCCcEEEecCCCCC-CCC-CCCCEEEEchh
Confidence 899999999 8988999988 568899999999 999999999877644 45789999999976 222 67999998876
Q ss_pred CC-CCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 212 VG-MSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 212 ~~-~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.+ +..++..++++++.+.|+|||++++..
T Consensus 243 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 272 (334)
T 2ip2_A 243 IGDLDEAASLRLLGNCREAMAGDGRVVVIE 272 (334)
T ss_dssp GGGCCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 54 455666799999999999999998875
No 136
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.40 E-value=7.8e-14 Score=120.87 Aligned_cols=105 Identities=21% Similarity=0.222 Sum_probs=86.0
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+|||+||| .|..++.+++ .+.+|+++|+|+.+++.|+++++..+ +..+++|+++|+.+.. ..+.||+|++
T Consensus 77 ~~~~~vLD~gcG-~G~~~~~la~---~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~~d~~~~~-~~~~~D~v~~ 150 (241)
T 3gdh_A 77 FKCDVVVDAFCG-VGGNTIQFAL---TGMRVIAIDIDPVKIALARNNAEVYG-IADKIEFICGDFLLLA-SFLKADVVFL 150 (241)
T ss_dssp SCCSEEEETTCT-TSHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHHTT-CGGGEEEEESCHHHHG-GGCCCSEEEE
T ss_pred cCCCEEEECccc-cCHHHHHHHH---cCCEEEEEECCHHHHHHHHHHHHHcC-CCcCeEEEECChHHhc-ccCCCCEEEE
Confidence 478899999999 8999999998 46899999999999999999988755 4468999999998865 3378999999
Q ss_pred cCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 209 AALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+...+.. .+....+.++.+.|+|||++++..
T Consensus 151 ~~~~~~~-~~~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 151 SPPWGGP-DYATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp CCCCSSG-GGGGSSSBCTTTSCSSCHHHHHHH
T ss_pred CCCcCCc-chhhhHHHHHHhhcCCcceeHHHH
Confidence 8766443 233336667889999999977654
No 137
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.40 E-value=6.4e-13 Score=118.45 Aligned_cols=103 Identities=17% Similarity=0.096 Sum_probs=85.9
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
+++++|||+||| .|..++.+++ ... .+|+++|+|+.+++.|+++++..+ +..+++|+++|+.+... .+.||+|++
T Consensus 124 ~~~~~VLDlgcG-~G~~~~~la~-~~~-~~V~~vD~s~~~~~~a~~n~~~n~-~~~~v~~~~~D~~~~~~-~~~fD~Vi~ 198 (278)
T 2frn_A 124 KPDELVVDMFAG-IGHLSLPIAV-YGK-AKVIAIEKDPYTFKFLVENIHLNK-VEDRMSAYNMDNRDFPG-ENIADRILM 198 (278)
T ss_dssp CTTCEEEETTCT-TTTTHHHHHH-HTC-CEEEEECCCHHHHHHHHHHHHHTT-CTTTEEEECSCTTTCCC-CSCEEEEEE
T ss_pred CCCCEEEEeccc-CCHHHHHHHH-hCC-CEEEEEECCHHHHHHHHHHHHHcC-CCceEEEEECCHHHhcc-cCCccEEEE
Confidence 568999999999 8999999998 222 279999999999999999988744 56679999999987654 468999999
Q ss_pred cCcCCCCHHHHHHHHHHHHhccccCcEEEEEec
Q 039591 209 AALVGMSKEEKMKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 209 ~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
+.+.+ ..++++.+.+.|+|||++++.+.
T Consensus 199 ~~p~~-----~~~~l~~~~~~LkpgG~l~~~~~ 226 (278)
T 2frn_A 199 GYVVR-----THEFIPKALSIAKDGAIIHYHNT 226 (278)
T ss_dssp CCCSS-----GGGGHHHHHHHEEEEEEEEEEEE
T ss_pred CCchh-----HHHHHHHHHHHCCCCeEEEEEEe
Confidence 86642 25788999999999999998763
No 138
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.40 E-value=1.9e-12 Score=118.91 Aligned_cols=148 Identities=14% Similarity=0.187 Sum_probs=107.0
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+||||||| .|..+..+++ ..++.+++++|+ +.+++.|++++...+ +.++++|+.+|+.+... ..||+|++
T Consensus 182 ~~~~~vLDvG~G-~G~~~~~l~~-~~~~~~~~~~D~-~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~--~~~D~v~~ 255 (360)
T 1tw3_A 182 TNVRHVLDVGGG-KGGFAAAIAR-RAPHVSATVLEM-AGTVDTARSYLKDEG-LSDRVDVVEGDFFEPLP--RKADAIIL 255 (360)
T ss_dssp TTCSEEEEETCT-TSHHHHHHHH-HCTTCEEEEEEC-TTHHHHHHHHHHHTT-CTTTEEEEECCTTSCCS--SCEEEEEE
T ss_pred ccCcEEEEeCCc-CcHHHHHHHH-hCCCCEEEEecC-HHHHHHHHHHHHhcC-CCCceEEEeCCCCCCCC--CCccEEEE
Confidence 567899999999 8999999988 568889999999 999999999987754 55689999999875221 35999998
Q ss_pred cCcCC-CCHHHHHHHHHHHHhccccCcEEEEEecc--c------hhh---h------cCCCCCCC---C-C--CCcEEEE
Q 039591 209 AALVG-MSKEEKMKIIRHIRKYMKDGGILLVRSAK--G------ARA---F------LYPVVERH---D-L--LDFEVLS 264 (284)
Q Consensus 209 ~~~~~-~~~~~k~~~l~~~~~~L~pGG~lv~~~~~--g------~~~---~------lyp~v~~~---~-l--~gf~~~~ 264 (284)
....+ +..++..++++++.+.|+|||++++.... . ... . ........ . + .||+++.
T Consensus 256 ~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 335 (360)
T 1tw3_A 256 SFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVEE 335 (360)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEE
T ss_pred cccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEEE
Confidence 77553 44455579999999999999999876422 1 000 0 00101111 1 1 6999987
Q ss_pred EEcCCC---ceeeEEEEEeec
Q 039591 265 IFHPID---EVINSVILVRKP 282 (284)
Q Consensus 265 ~~~p~~---~v~nsvi~~rk~ 282 (284)
+....+ ....++|.++|+
T Consensus 336 ~~~~~~~~~~~~~~~i~~~~~ 356 (360)
T 1tw3_A 336 VRQLPSPTIPYDLSLLVLAPA 356 (360)
T ss_dssp EEEEECSSSSCEEEEEEEEEC
T ss_pred EEeCCCCcccCccEEEEEEeC
Confidence 654322 234689999986
No 139
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.40 E-value=8.6e-12 Score=117.74 Aligned_cols=112 Identities=13% Similarity=0.138 Sum_probs=86.5
Q ss_pred HhhccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHH-------HHHHhhccCCC-CCeEEEEcchhh
Q 039591 124 KENGVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVA-------RRIVATDFEFE-KRMKFLTGDILQ 195 (284)
Q Consensus 124 ~~~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A-------~~~~~~~~~l~-~~v~~~~~D~~~ 195 (284)
......++.+||||||| .|..++.+|+ ..+..+|+|+|+++.+++.| +++++..| +. .+++++++|...
T Consensus 236 ~~l~l~~g~~VLDLGCG-sG~la~~LA~-~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~G-l~~~nV~~i~gD~~~ 312 (433)
T 1u2z_A 236 QQCQLKKGDTFMDLGSG-VGNCVVQAAL-ECGCALSFGCEIMDDASDLTILQYEELKKRCKLYG-MRLNNVEFSLKKSFV 312 (433)
T ss_dssp HHTTCCTTCEEEEESCT-TSHHHHHHHH-HHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTT-BCCCCEEEEESSCST
T ss_pred HhcCCCCCCEEEEeCCC-cCHHHHHHHH-HCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcC-CCCCceEEEEcCccc
Confidence 33345788999999999 9999999998 34556899999999999999 88777654 32 689999986542
Q ss_pred h----hccCCCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 196 V----KEKLGEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 196 ~----~~~l~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
. ....+.||+|+++... .. ++....++++.+.|||||++++..
T Consensus 313 ~~~~~~~~~~~FDvIvvn~~l-~~-~d~~~~L~el~r~LKpGG~lVi~d 359 (433)
T 1u2z_A 313 DNNRVAELIPQCDVILVNNFL-FD-EDLNKKVEKILQTAKVGCKIISLK 359 (433)
T ss_dssp TCHHHHHHGGGCSEEEECCTT-CC-HHHHHHHHHHHTTCCTTCEEEESS
T ss_pred cccccccccCCCCEEEEeCcc-cc-ccHHHHHHHHHHhCCCCeEEEEee
Confidence 1 1123689999986433 22 566788899999999999999864
No 140
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.40 E-value=2.4e-12 Score=114.21 Aligned_cols=107 Identities=19% Similarity=0.214 Sum_probs=87.8
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+|||+||| .|..++.+++ ..++.+|+++|+|+.+++.|+++++..+ + .+++|+++|+.+... .++||+|++
T Consensus 108 ~~~~~vLDlG~G-sG~~~~~la~-~~~~~~v~~vD~s~~~l~~a~~n~~~~~-~-~~v~~~~~d~~~~~~-~~~fD~Iv~ 182 (276)
T 2b3t_A 108 EQPCRILDLGTG-TGAIALALAS-ERPDCEIIAVDRMPDAVSLAQRNAQHLA-I-KNIHILQSDWFSALA-GQQFAMIVS 182 (276)
T ss_dssp SSCCEEEEETCT-TSHHHHHHHH-HCTTSEEEEECSSHHHHHHHHHHHHHHT-C-CSEEEECCSTTGGGT-TCCEEEEEE
T ss_pred cCCCEEEEecCC-ccHHHHHHHH-hCCCCEEEEEECCHHHHHHHHHHHHHcC-C-CceEEEEcchhhhcc-cCCccEEEE
Confidence 567899999999 8999999997 5688999999999999999999988765 3 479999999987432 368999999
Q ss_pred cCcCCCC------------------------HHHHHHHHHHHHhccccCcEEEEEe
Q 039591 209 AALVGMS------------------------KEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~~~~------------------------~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+.+.... ......+++++.++|+|||++++..
T Consensus 183 npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~ 238 (276)
T 2b3t_A 183 NPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEH 238 (276)
T ss_dssp CCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 8543211 0244789999999999999999865
No 141
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.40 E-value=5.1e-12 Score=116.37 Aligned_cols=145 Identities=20% Similarity=0.206 Sum_probs=107.3
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
....+|+||||| .|..++.+++ ..|+.+++..|. |.+++.|++..+. + ..++|+|+.+|+.+. ...++|+|++
T Consensus 178 ~~~~~v~DvGgG-~G~~~~~l~~-~~p~~~~~~~dl-p~v~~~a~~~~~~-~-~~~rv~~~~gD~~~~--~~~~~D~~~~ 250 (353)
T 4a6d_A 178 SVFPLMCDLGGG-AGALAKECMS-LYPGCKITVFDI-PEVVWTAKQHFSF-Q-EEEQIDFQEGDFFKD--PLPEADLYIL 250 (353)
T ss_dssp GGCSEEEEETCT-TSHHHHHHHH-HCSSCEEEEEEC-HHHHHHHHHHSCC----CCSEEEEESCTTTS--CCCCCSEEEE
T ss_pred ccCCeEEeeCCC-CCHHHHHHHH-hCCCceeEeccC-HHHHHHHHHhhhh-c-ccCceeeecCccccC--CCCCceEEEe
Confidence 566799999999 8999999998 689999999998 8999999998765 3 258999999998753 3467899998
Q ss_pred cCcCC-CCHHHHHHHHHHHHhccccCcEEEEEec----cc--h--hhh-------cCCCCCCC-----CC---CCcEEEE
Q 039591 209 AALVG-MSKEEKMKIIRHIRKYMKDGGILLVRSA----KG--A--RAF-------LYPVVERH-----DL---LDFEVLS 264 (284)
Q Consensus 209 ~~~~~-~~~~~k~~~l~~~~~~L~pGG~lv~~~~----~g--~--~~~-------lyp~v~~~-----~l---~gf~~~~ 264 (284)
....+ +.+++..++++++++.|+|||+|++... .+ . ... ...-.+.. .+ .||+.+.
T Consensus 251 ~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~~v~ 330 (353)
T 4a6d_A 251 ARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQ 330 (353)
T ss_dssp ESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCEEEE
T ss_pred eeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCceEE
Confidence 77554 4556678999999999999999988652 11 0 000 11111111 12 6999875
Q ss_pred EEcCCCceeeEEEEEeec
Q 039591 265 IFHPIDEVINSVILVRKP 282 (284)
Q Consensus 265 ~~~p~~~v~nsvi~~rk~ 282 (284)
+ +|.+.. .++|+|||+
T Consensus 331 v-~~~~~~-~~~i~ArKg 346 (353)
T 4a6d_A 331 F-KKTGAI-YDAILARKG 346 (353)
T ss_dssp E-ECCSSS-CEEEEEECC
T ss_pred E-EEcCCc-eEEEEEEec
Confidence 4 566543 589999996
No 142
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.39 E-value=1.8e-12 Score=111.83 Aligned_cols=102 Identities=13% Similarity=0.170 Sum_probs=82.6
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhh----hhccCCCc
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQ----VKEKLGEY 203 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~----~~~~l~~f 203 (284)
..++.+|||+||| .|..+..+++ ..+..+|+++|+|+.+++.|+++++.. .++.++.+|+.+ .... +.|
T Consensus 72 ~~~~~~VLDlGcG-~G~~~~~la~-~~~~~~v~gvD~s~~~~~~a~~~~~~~----~~v~~~~~d~~~~~~~~~~~-~~~ 144 (230)
T 1fbn_A 72 IKRDSKILYLGAS-AGTTPSHVAD-IADKGIVYAIEYAPRIMRELLDACAER----ENIIPILGDANKPQEYANIV-EKV 144 (230)
T ss_dssp CCTTCEEEEESCC-SSHHHHHHHH-HTTTSEEEEEESCHHHHHHHHHHTTTC----TTEEEEECCTTCGGGGTTTS-CCE
T ss_pred CCCCCEEEEEccc-CCHHHHHHHH-HcCCcEEEEEECCHHHHHHHHHHhhcC----CCeEEEECCCCCcccccccC-ccE
Confidence 3678899999999 8999999998 445689999999999999999987642 689999999976 3222 689
Q ss_pred cEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEE
Q 039591 204 DCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVR 239 (284)
Q Consensus 204 D~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~ 239 (284)
|+|+.+... +.....+++++.+.|+|||++++.
T Consensus 145 D~v~~~~~~---~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 145 DVIYEDVAQ---PNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EEEEECCCS---TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEecCC---hhHHHHHHHHHHHhCCCCcEEEEE
Confidence 999955321 234467899999999999999885
No 143
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.39 E-value=6.2e-13 Score=114.13 Aligned_cols=105 Identities=19% Similarity=0.244 Sum_probs=84.8
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcC----CCcEEEEEeCCHHHHHHHHHHHhhccCC----CCCeEEEEcchhhhh--
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHL----KATHFDNFDIDEAANNVARRIVATDFEF----EKRMKFLTGDILQVK-- 197 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~----~~~~V~~vDis~~~~~~A~~~~~~~~~l----~~~v~~~~~D~~~~~-- 197 (284)
..++.+||||||| .|..+..+++... +..+|+++|+++.+++.|+++++..+ + ..+++++++|+.+..
T Consensus 78 ~~~~~~VLdiG~G-~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~~~~~v~~~~~d~~~~~~~ 155 (227)
T 2pbf_A 78 LKPGSRAIDVGSG-SGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDK-PELLKIDNFKIIHKNIYQVNEE 155 (227)
T ss_dssp SCTTCEEEEESCT-TSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHC-GGGGSSTTEEEEECCGGGCCHH
T ss_pred CCCCCEEEEECCC-CCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcC-ccccccCCEEEEECChHhcccc
Confidence 4678899999999 7999999998322 45799999999999999999987644 1 357999999998743
Q ss_pred --ccCCCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEec
Q 039591 198 --EKLGEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 198 --~~l~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
...++||+|+++.... .+++.+.+.|+|||++++...
T Consensus 156 ~~~~~~~fD~I~~~~~~~-------~~~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 156 EKKELGLFDAIHVGASAS-------ELPEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HHHHHCCEEEEEECSBBS-------SCCHHHHHHEEEEEEEEEEEE
T ss_pred cCccCCCcCEEEECCchH-------HHHHHHHHhcCCCcEEEEEEc
Confidence 3337899999988763 345788999999999998764
No 144
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.39 E-value=1.3e-12 Score=112.11 Aligned_cols=105 Identities=19% Similarity=0.155 Sum_probs=83.7
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCC----CCCeEEEEcchhhhhccCCCc
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEF----EKRMKFLTGDILQVKEKLGEY 203 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l----~~~v~~~~~D~~~~~~~l~~f 203 (284)
..++.+|||+||| .|..+..+++...+..+|+++|+++.+++.|++++...+ . ..+++++++|+.+.....+.|
T Consensus 75 ~~~~~~vLDiG~G-~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~f 152 (226)
T 1i1n_A 75 LHEGAKALDVGSG-SGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDD-PTLLSSGRVQLVVGDGRMGYAEEAPY 152 (226)
T ss_dssp SCTTCEEEEETCT-TSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHC-THHHHTSSEEEEESCGGGCCGGGCCE
T ss_pred CCCCCEEEEEcCC-cCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhc-ccccCCCcEEEEECCcccCcccCCCc
Confidence 4678899999999 788888888732345799999999999999999987643 1 257999999987543334689
Q ss_pred cEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEec
Q 039591 204 DCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 204 D~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
|+|+++.... .+++++.+.|||||++++...
T Consensus 153 D~i~~~~~~~-------~~~~~~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 153 DAIHVGAAAP-------VVPQALIDQLKPGGRLILPVG 183 (226)
T ss_dssp EEEEECSBBS-------SCCHHHHHTEEEEEEEEEEES
T ss_pred CEEEECCchH-------HHHHHHHHhcCCCcEEEEEEe
Confidence 9999987662 345688999999999998663
No 145
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.39 E-value=1.2e-12 Score=118.23 Aligned_cols=108 Identities=13% Similarity=0.128 Sum_probs=78.7
Q ss_pred CCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCC-----CeEEEEcch------hhhhc
Q 039591 130 QPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEK-----RMKFLTGDI------LQVKE 198 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~-----~v~~~~~D~------~~~~~ 198 (284)
++.+||||||| .|..+..+++ ..+.+|+|+|+|+.+++.|++.....+ ... .++|.++|+ .+...
T Consensus 48 ~~~~VLDlGCG-~G~~l~~~~~--~~~~~v~GiD~S~~~l~~A~~~~~~~~-~~~~~~~~~~~f~~~d~~~d~~~~~l~~ 123 (302)
T 2vdw_A 48 NKRKVLAIDFG-NGADLEKYFY--GEIALLVATDPDADAIARGNERYNKLN-SGIKTKYYKFDYIQETIRSDTFVSSVRE 123 (302)
T ss_dssp SCCEEEETTCT-TTTTHHHHHH--TTCSEEEEEESCHHHHHHHHHHHHHHC-C----CCCEEEEEECCTTSSSHHHHHHT
T ss_pred CCCeEEEEecC-CcHhHHHHHh--cCCCeEEEEECCHHHHHHHHHHHHhcc-ccccccccccchhhhhcccchhhhhhhc
Confidence 47899999999 7755554554 256799999999999999999876543 111 267888887 32221
Q ss_pred --cCCCccEEEEcCcCC--CCHHHHHHHHHHHHhccccCcEEEEEec
Q 039591 199 --KLGEYDCIFLAALVG--MSKEEKMKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 199 --~l~~fD~V~~~~~~~--~~~~~k~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
..++||+|++....+ ...+++..+++++.++|||||++++...
T Consensus 124 ~~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 124 VFYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp TCCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 226899998765432 1224568999999999999999998764
No 146
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.39 E-value=2.1e-12 Score=111.38 Aligned_cols=102 Identities=17% Similarity=0.303 Sum_probs=84.5
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+|||+||| .|..+..+++ . .+|+++|+|+.+++.|+++....+ .+++++++|+.+.... +.||+|++
T Consensus 32 ~~~~~vLdiG~G-~G~~~~~l~~---~-~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~d~~~~~~~-~~fD~v~~ 102 (243)
T 3d2l_A 32 EPGKRIADIGCG-TGTATLLLAD---H-YEVTGVDLSEEMLEIAQEKAMETN---RHVDFWVQDMRELELP-EPVDAITI 102 (243)
T ss_dssp CTTCEEEEESCT-TCHHHHHHTT---T-SEEEEEESCHHHHHHHHHHHHHTT---CCCEEEECCGGGCCCS-SCEEEEEE
T ss_pred CCCCeEEEecCC-CCHHHHHHhh---C-CeEEEEECCHHHHHHHHHhhhhcC---CceEEEEcChhhcCCC-CCcCEEEE
Confidence 456899999999 7988988887 2 799999999999999999987643 5799999999875433 78999998
Q ss_pred cC-cC-CC-CHHHHHHHHHHHHhccccCcEEEEE
Q 039591 209 AA-LV-GM-SKEEKMKIIRHIRKYMKDGGILLVR 239 (284)
Q Consensus 209 ~~-~~-~~-~~~~k~~~l~~~~~~L~pGG~lv~~ 239 (284)
.. .. +. ..++...+++++.+.|+|||++++.
T Consensus 103 ~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 103 LCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp CTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 64 22 22 3467789999999999999999984
No 147
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.39 E-value=1.7e-12 Score=117.25 Aligned_cols=110 Identities=18% Similarity=0.225 Sum_probs=85.7
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhc--cCCCCCeEEEEcchhhhhcc--CCCcc
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATD--FEFEKRMKFLTGDILQVKEK--LGEYD 204 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~--~~l~~~v~~~~~D~~~~~~~--l~~fD 204 (284)
.++.+||||||| .|..+..+++ +.+..+|+++|+|+.+++.|++++..+ +....+++++.+|+.+.... .+.||
T Consensus 94 ~~~~~VLdiG~G-~G~~~~~l~~-~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD 171 (304)
T 3bwc_A 94 PKPERVLIIGGG-DGGVLREVLR-HGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYD 171 (304)
T ss_dssp SSCCEEEEEECT-TSHHHHHHHT-CTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEE
T ss_pred CCCCeEEEEcCC-CCHHHHHHHh-CCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCcee
Confidence 567899999999 8999999998 456789999999999999999987421 11246899999999886543 37899
Q ss_pred EEEEcCcCCCCHHHH---HHHHHHHHhccccCcEEEEEe
Q 039591 205 CIFLAALVGMSKEEK---MKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 205 ~V~~~~~~~~~~~~k---~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+|+++......+... .++++.+.+.|+|||++++..
T Consensus 172 vIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 210 (304)
T 3bwc_A 172 VVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQG 210 (304)
T ss_dssp EEEEECC---------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 999987543221111 589999999999999999875
No 148
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.39 E-value=3.1e-12 Score=114.48 Aligned_cols=108 Identities=19% Similarity=0.250 Sum_probs=87.2
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCc---cE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEY---DC 205 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~f---D~ 205 (284)
.++.+|||+||| .|..++.+++ . ++.+|+++|+|+.+++.|+++++..+ +..+++|+++|+.+... ++| |+
T Consensus 122 ~~~~~vLDlG~G-sG~~~~~la~-~-~~~~v~~vDis~~al~~A~~n~~~~~-l~~~v~~~~~D~~~~~~--~~f~~~D~ 195 (284)
T 1nv8_A 122 YGIKTVADIGTG-SGAIGVSVAK-F-SDAIVFATDVSSKAVEIARKNAERHG-VSDRFFVRKGEFLEPFK--EKFASIEM 195 (284)
T ss_dssp HTCCEEEEESCT-TSHHHHHHHH-H-SSCEEEEEESCHHHHHHHHHHHHHTT-CTTSEEEEESSTTGGGG--GGTTTCCE
T ss_pred cCCCEEEEEeCc-hhHHHHHHHH-C-CCCEEEEEECCHHHHHHHHHHHHHcC-CCCceEEEECcchhhcc--cccCCCCE
Confidence 356799999999 8999999998 4 88999999999999999999998765 55679999999987432 468 99
Q ss_pred EEEcCcCCC----------CH--------HHHHHHHHHHH-hccccCcEEEEEecc
Q 039591 206 IFLAALVGM----------SK--------EEKMKIIRHIR-KYMKDGGILLVRSAK 242 (284)
Q Consensus 206 V~~~~~~~~----------~~--------~~k~~~l~~~~-~~L~pGG~lv~~~~~ 242 (284)
|+++.+... +. .+...+++++. +.++|||.+++....
T Consensus 196 IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~ 251 (284)
T 1nv8_A 196 ILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGE 251 (284)
T ss_dssp EEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCT
T ss_pred EEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECc
Confidence 999854321 10 01127899999 999999999987643
No 149
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.39 E-value=2e-12 Score=114.33 Aligned_cols=108 Identities=17% Similarity=0.229 Sum_probs=88.3
Q ss_pred ccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhc-cCCCCCeEEEEcchhhhhccCCCccE
Q 039591 127 GVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATD-FEFEKRMKFLTGDILQVKEKLGEYDC 205 (284)
Q Consensus 127 ~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~-~~l~~~v~~~~~D~~~~~~~l~~fD~ 205 (284)
...++.+|||+||| .|..+..+++...++.+|+++|+|+.+++.|+++++.. +.+..+++++++|+.+...+.+.||+
T Consensus 96 ~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~ 174 (280)
T 1i9g_A 96 DIFPGARVLEAGAG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDR 174 (280)
T ss_dssp TCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEE
T ss_pred CCCCCCEEEEEccc-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeE
Confidence 34778899999999 89999999873346789999999999999999998765 32346899999999875433368999
Q ss_pred EEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEec
Q 039591 206 IFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 206 V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
|+++... ...+++++.+.|+|||++++...
T Consensus 175 v~~~~~~------~~~~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 175 AVLDMLA------PWEVLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp EEEESSC------GGGGHHHHHHHEEEEEEEEEEES
T ss_pred EEECCcC------HHHHHHHHHHhCCCCCEEEEEeC
Confidence 9986542 24789999999999999998763
No 150
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.39 E-value=1.9e-12 Score=118.51 Aligned_cols=107 Identities=17% Similarity=0.169 Sum_probs=86.7
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCC-CeEEEEcchhhhhcc----CCCc
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEK-RMKFLTGDILQVKEK----LGEY 203 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~-~v~~~~~D~~~~~~~----l~~f 203 (284)
.++.+|||+||| .|..++.+++ .+++|+++|+|+.+++.|+++++..+ +.. +++++++|+.+.... .+.|
T Consensus 152 ~~~~~VLDlgcG-tG~~sl~la~---~ga~V~~VD~s~~al~~a~~n~~~~g-l~~~~v~~i~~D~~~~l~~~~~~~~~f 226 (332)
T 2igt_A 152 DRPLKVLNLFGY-TGVASLVAAA---AGAEVTHVDASKKAIGWAKENQVLAG-LEQAPIRWICEDAMKFIQREERRGSTY 226 (332)
T ss_dssp SSCCEEEEETCT-TCHHHHHHHH---TTCEEEEECSCHHHHHHHHHHHHHHT-CTTSCEEEECSCHHHHHHHHHHHTCCB
T ss_pred CCCCcEEEcccc-cCHHHHHHHH---cCCEEEEEECCHHHHHHHHHHHHHcC-CCccceEEEECcHHHHHHHHHhcCCCc
Confidence 467899999999 8999999998 45699999999999999999988755 444 599999999886532 3689
Q ss_pred cEEEEcCcC-CC--------CHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 204 DCIFLAALV-GM--------SKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 204 D~V~~~~~~-~~--------~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|+|+++.+. +. ...+..++++.+.+.|+|||++++..
T Consensus 227 D~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~ 272 (332)
T 2igt_A 227 DIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLT 272 (332)
T ss_dssp SEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEE
T ss_pred eEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 999998752 21 12455789999999999999977655
No 151
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.39 E-value=1.5e-12 Score=112.79 Aligned_cols=98 Identities=13% Similarity=0.159 Sum_probs=81.2
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhcc--CCCccEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEK--LGEYDCI 206 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~--l~~fD~V 206 (284)
.++.+||||||| .|..+..+++ .+.+|+++|+|+.+++.|+++ ++++++|+.+...+ .+.||+|
T Consensus 40 ~~~~~vLDiGcG-~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~----------~~~~~~d~~~~~~~~~~~~fD~i 105 (240)
T 3dli_A 40 KGCRRVLDIGCG-RGEFLELCKE---EGIESIGVDINEDMIKFCEGK----------FNVVKSDAIEYLKSLPDKYLDGV 105 (240)
T ss_dssp TTCSCEEEETCT-TTHHHHHHHH---HTCCEEEECSCHHHHHHHHTT----------SEEECSCHHHHHHTSCTTCBSEE
T ss_pred cCCCeEEEEeCC-CCHHHHHHHh---CCCcEEEEECCHHHHHHHHhh----------cceeeccHHHHhhhcCCCCeeEE
Confidence 567899999999 8988999988 377899999999999988764 67889998875322 3789999
Q ss_pred EEcCcC-CCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 207 FLAALV-GMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 207 ~~~~~~-~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
++.... +...++...+++++.+.|||||++++..
T Consensus 106 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (240)
T 3dli_A 106 MISHFVEHLDPERLFELLSLCYSKMKYSSYIVIES 140 (240)
T ss_dssp EEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEE
T ss_pred EECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 987655 3344466899999999999999999876
No 152
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.38 E-value=2.3e-12 Score=119.72 Aligned_cols=105 Identities=16% Similarity=0.222 Sum_probs=85.7
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+||||||| .|..++.+++ .+..+|+++|+| .+++.|+++++..+ +..+++++++|+.+...+ ++||+|++
T Consensus 62 ~~~~~VLDlGcG-tG~ls~~la~--~g~~~V~gvD~s-~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~-~~~D~Iv~ 135 (376)
T 3r0q_C 62 FEGKTVLDVGTG-SGILAIWSAQ--AGARKVYAVEAT-KMADHARALVKANN-LDHIVEVIEGSVEDISLP-EKVDVIIS 135 (376)
T ss_dssp TTTCEEEEESCT-TTHHHHHHHH--TTCSEEEEEESS-TTHHHHHHHHHHTT-CTTTEEEEESCGGGCCCS-SCEEEEEE
T ss_pred CCCCEEEEeccC-cCHHHHHHHh--cCCCEEEEEccH-HHHHHHHHHHHHcC-CCCeEEEEECchhhcCcC-CcceEEEE
Confidence 678899999999 9999999998 233499999999 99999999988755 667899999999876444 78999998
Q ss_pred cCcCC--CCHHHHHHHHHHHHhccccCcEEEEE
Q 039591 209 AALVG--MSKEEKMKIIRHIRKYMKDGGILLVR 239 (284)
Q Consensus 209 ~~~~~--~~~~~k~~~l~~~~~~L~pGG~lv~~ 239 (284)
+.... ........+++.+.++|||||+++..
T Consensus 136 ~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 136 EWMGYFLLRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp CCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred cChhhcccchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 65321 12234678999999999999999864
No 153
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.38 E-value=1.9e-12 Score=109.98 Aligned_cols=105 Identities=21% Similarity=0.175 Sum_probs=83.8
Q ss_pred ccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEE
Q 039591 127 GVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCI 206 (284)
Q Consensus 127 ~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V 206 (284)
...++.+|||+||| .|..+..+++...+..+|+++|+|+.+++.|++++...+ + .+++++++|+.+.....+.||+|
T Consensus 74 ~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~-~~v~~~~~d~~~~~~~~~~fD~v 150 (215)
T 2yxe_A 74 DLKPGMKVLEIGTG-CGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLG-Y-DNVIVIVGDGTLGYEPLAPYDRI 150 (215)
T ss_dssp TCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHT-C-TTEEEEESCGGGCCGGGCCEEEE
T ss_pred CCCCCCEEEEECCC-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC-C-CCeEEEECCcccCCCCCCCeeEE
Confidence 34678899999999 899999998832244899999999999999999987755 3 46999999986533323689999
Q ss_pred EEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEec
Q 039591 207 FLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 207 ~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
+++...... .+++.+.|||||++++...
T Consensus 151 ~~~~~~~~~-------~~~~~~~L~pgG~lv~~~~ 178 (215)
T 2yxe_A 151 YTTAAGPKI-------PEPLIRQLKDGGKLLMPVG 178 (215)
T ss_dssp EESSBBSSC-------CHHHHHTEEEEEEEEEEES
T ss_pred EECCchHHH-------HHHHHHHcCCCcEEEEEEC
Confidence 998766433 2478899999999998764
No 154
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.38 E-value=5.5e-12 Score=110.90 Aligned_cols=120 Identities=16% Similarity=0.185 Sum_probs=91.3
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+|||+||| .|..+..+++ ..++.+|+++|+|+.+++.|+++. .++.+..+|+.+.....+.||+|++
T Consensus 84 ~~~~~vLdiG~G-~G~~~~~l~~-~~~~~~v~~vD~s~~~~~~a~~~~-------~~~~~~~~d~~~~~~~~~~fD~v~~ 154 (269)
T 1p91_A 84 DKATAVLDIGCG-EGYYTHAFAD-ALPEITTFGLDVSKVAIKAAAKRY-------PQVTFCVASSHRLPFSDTSMDAIIR 154 (269)
T ss_dssp TTCCEEEEETCT-TSTTHHHHHH-TCTTSEEEEEESCHHHHHHHHHHC-------TTSEEEECCTTSCSBCTTCEEEEEE
T ss_pred CCCCEEEEECCC-CCHHHHHHHH-hCCCCeEEEEeCCHHHHHHHHHhC-------CCcEEEEcchhhCCCCCCceeEEEE
Confidence 578899999999 6998989988 456889999999999999998863 3578999998765433478999997
Q ss_pred cCcCCCCHHHHHHHHHHHHhccccCcEEEEEec-----cchhhhcCCCCCCC-----CCCCcEEEEE
Q 039591 209 AALVGMSKEEKMKIIRHIRKYMKDGGILLVRSA-----KGARAFLYPVVERH-----DLLDFEVLSI 265 (284)
Q Consensus 209 ~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~-----~g~~~~lyp~v~~~-----~l~gf~~~~~ 265 (284)
.... ..++++.+.|||||++++... ..++..+|+..... ...||+++..
T Consensus 155 ~~~~--------~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~~~~ 213 (269)
T 1p91_A 155 IYAP--------CKAEELARVVKPGGWVITATPGPRHLMELKGLIYNEVHLHAPHAEQLEGFTLQQS 213 (269)
T ss_dssp ESCC--------CCHHHHHHHEEEEEEEEEEEECTTTTHHHHTTTCSSCCCCCCCCCCCTTEEEEEE
T ss_pred eCCh--------hhHHHHHHhcCCCcEEEEEEcCHHHHHHHHHHhhcccccccchhhHhcCCcEEEE
Confidence 5432 358899999999999988762 22334556654432 1268988754
No 155
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.38 E-value=2.3e-12 Score=114.67 Aligned_cols=108 Identities=13% Similarity=0.175 Sum_probs=85.7
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccC--CCCCeEEEEcchhhhh---ccCCCc
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFE--FEKRMKFLTGDILQVK---EKLGEY 203 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~--l~~~v~~~~~D~~~~~---~~l~~f 203 (284)
.++.+||||||| .|..+..+++ .+.+|+++|+|+.+++.|+++....+. ...++.+..+|+.+.. ...+.|
T Consensus 56 ~~~~~vLDiGcG-~G~~~~~l~~---~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~f 131 (293)
T 3thr_A 56 HGCHRVLDVACG-TGVDSIMLVE---EGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGF 131 (293)
T ss_dssp TTCCEEEETTCT-TSHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCE
T ss_pred cCCCEEEEecCC-CCHHHHHHHH---CCCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCe
Confidence 567899999999 8999999998 467999999999999999987633210 0146889999998765 233789
Q ss_pred cEEEEc-CcC-CCCH-----HHHHHHHHHHHhccccCcEEEEEe
Q 039591 204 DCIFLA-ALV-GMSK-----EEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 204 D~V~~~-~~~-~~~~-----~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|+|++. ... +... ++...+++++.++|||||++++..
T Consensus 132 D~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (293)
T 3thr_A 132 DAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDH 175 (293)
T ss_dssp EEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 999986 332 3332 558899999999999999999865
No 156
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.38 E-value=1.5e-12 Score=115.42 Aligned_cols=100 Identities=17% Similarity=0.169 Sum_probs=84.1
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEE
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIF 207 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~ 207 (284)
..++.+||||||| .|..+..+++ ++.+|+++|+|+.+++.|++.. .+++++.+|+.+... .+.||+|+
T Consensus 55 ~~~~~~vLDiGcG-~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~-------~~~~~~~~d~~~~~~-~~~fD~v~ 122 (279)
T 3ccf_A 55 PQPGEFILDLGCG-TGQLTEKIAQ---SGAEVLGTDNAATMIEKARQNY-------PHLHFDVADARNFRV-DKPLDAVF 122 (279)
T ss_dssp CCTTCEEEEETCT-TSHHHHHHHH---TTCEEEEEESCHHHHHHHHHHC-------TTSCEEECCTTTCCC-SSCEEEEE
T ss_pred CCCCCEEEEecCC-CCHHHHHHHh---CCCeEEEEECCHHHHHHHHhhC-------CCCEEEECChhhCCc-CCCcCEEE
Confidence 4678899999999 8999999987 7889999999999999999864 358899999987543 37899999
Q ss_pred EcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 208 LAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 208 ~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+....++. .+...+++++.+.|||||++++..
T Consensus 123 ~~~~l~~~-~d~~~~l~~~~~~LkpgG~l~~~~ 154 (279)
T 3ccf_A 123 SNAMLHWV-KEPEAAIASIHQALKSGGRFVAEF 154 (279)
T ss_dssp EESCGGGC-SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EcchhhhC-cCHHHHHHHHHHhcCCCcEEEEEe
Confidence 88765433 356789999999999999999865
No 157
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.38 E-value=2.9e-12 Score=110.00 Aligned_cols=105 Identities=16% Similarity=0.176 Sum_probs=84.0
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhh--ccC-CCcc
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVK--EKL-GEYD 204 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~--~~l-~~fD 204 (284)
..++.+|||+||| .|..++.+++...++.+|+++|+|+.+++.++++++.. .+++++++|+.+.. ... +.||
T Consensus 71 ~~~~~~vLDlG~G-~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~----~~v~~~~~d~~~~~~~~~~~~~~D 145 (227)
T 1g8a_A 71 IKPGKSVLYLGIA-SGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER----RNIVPILGDATKPEEYRALVPKVD 145 (227)
T ss_dssp CCTTCEEEEETTT-STTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC----TTEEEEECCTTCGGGGTTTCCCEE
T ss_pred CCCCCEEEEEecc-CCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc----CCCEEEEccCCCcchhhcccCCce
Confidence 3678899999999 89999999973345689999999999999999987652 57999999998632 122 5799
Q ss_pred EEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 205 CIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 205 ~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+|+++... +.....+++++.+.|||||.+++..
T Consensus 146 ~v~~~~~~---~~~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 146 VIFEDVAQ---PTQAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp EEEECCCS---TTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECCCC---HhHHHHHHHHHHHhcCCCCEEEEEE
Confidence 99988652 2333456999999999999998863
No 158
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.38 E-value=1.1e-11 Score=101.85 Aligned_cols=100 Identities=19% Similarity=0.207 Sum_probs=84.0
Q ss_pred ccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEE
Q 039591 127 GVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCI 206 (284)
Q Consensus 127 ~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V 206 (284)
...++.+|||+||| .|..+..+++ ++.+|+++|+|+.+++.|+++++..+ + .+++++++|+.+.. ..+.||+|
T Consensus 32 ~~~~~~~vLdiG~G-~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~-~-~~~~~~~~d~~~~~-~~~~~D~i 104 (183)
T 2yxd_A 32 NLNKDDVVVDVGCG-SGGMTVEIAK---RCKFVYAIDYLDGAIEVTKQNLAKFN-I-KNCQIIKGRAEDVL-DKLEFNKA 104 (183)
T ss_dssp CCCTTCEEEEESCC-CSHHHHHHHT---TSSEEEEEECSHHHHHHHHHHHHHTT-C-CSEEEEESCHHHHG-GGCCCSEE
T ss_pred CCCCCCEEEEeCCC-CCHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHHcC-C-CcEEEEECCccccc-cCCCCcEE
Confidence 34678899999999 8999999987 78999999999999999999988755 3 57999999998733 22689999
Q ss_pred EEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 207 FLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 207 ~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+++.. .+...+++.+.+. |||.+++..
T Consensus 105 ~~~~~-----~~~~~~l~~~~~~--~gG~l~~~~ 131 (183)
T 2yxd_A 105 FIGGT-----KNIEKIIEILDKK--KINHIVANT 131 (183)
T ss_dssp EECSC-----SCHHHHHHHHHHT--TCCEEEEEE
T ss_pred EECCc-----ccHHHHHHHHhhC--CCCEEEEEe
Confidence 99876 2347888888877 999999876
No 159
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.37 E-value=3.8e-12 Score=110.94 Aligned_cols=106 Identities=14% Similarity=0.168 Sum_probs=87.4
Q ss_pred ccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhc-cCCCCCeEEEEcchhhhhccCCCccE
Q 039591 127 GVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATD-FEFEKRMKFLTGDILQVKEKLGEYDC 205 (284)
Q Consensus 127 ~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~-~~l~~~v~~~~~D~~~~~~~l~~fD~ 205 (284)
...++.+|||+||| .|..++.+++...++.+|+++|+|+.+++.|+++++.. + ..+++++.+|+.+.....+.||+
T Consensus 93 ~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g--~~~v~~~~~d~~~~~~~~~~~D~ 169 (258)
T 2pwy_A 93 DLAPGMRVLEAGTG-SGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ--VENVRFHLGKLEEAELEEAAYDG 169 (258)
T ss_dssp TCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC--CCCEEEEESCGGGCCCCTTCEEE
T ss_pred CCCCCCEEEEECCC-cCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC--CCCEEEEECchhhcCCCCCCcCE
Confidence 34788899999999 79999999983356889999999999999999998775 4 36899999999875222367999
Q ss_pred EEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEec
Q 039591 206 IFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 206 V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
|+++... ...+++++.+.|+|||++++...
T Consensus 170 v~~~~~~------~~~~l~~~~~~L~~gG~l~~~~~ 199 (258)
T 2pwy_A 170 VALDLME------PWKVLEKAALALKPDRFLVAYLP 199 (258)
T ss_dssp EEEESSC------GGGGHHHHHHHEEEEEEEEEEES
T ss_pred EEECCcC------HHHHHHHHHHhCCCCCEEEEEeC
Confidence 9986432 25789999999999999998763
No 160
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.36 E-value=2e-12 Score=118.97 Aligned_cols=105 Identities=17% Similarity=0.239 Sum_probs=85.5
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++++||||||| .|..++.+++ .+..+|+++|+|+ +++.|+++++..+ +..+++++++|+.+...+.++||+|++
T Consensus 65 ~~~~~VLDvGcG-~G~~~~~la~--~g~~~v~gvD~s~-~l~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~fD~Iis 139 (349)
T 3q7e_A 65 FKDKVVLDVGSG-TGILCMFAAK--AGARKVIGIECSS-ISDYAVKIVKANK-LDHVVTIIKGKVEEVELPVEKVDIIIS 139 (349)
T ss_dssp HTTCEEEEESCT-TSHHHHHHHH--TTCSEEEEEECST-HHHHHHHHHHHTT-CTTTEEEEESCTTTCCCSSSCEEEEEE
T ss_pred CCCCEEEEEecc-chHHHHHHHH--CCCCEEEEECcHH-HHHHHHHHHHHcC-CCCcEEEEECcHHHccCCCCceEEEEE
Confidence 578899999999 8999999998 2556999999995 9999999988754 667799999999876444478999998
Q ss_pred cCcC--CCCHHHHHHHHHHHHhccccCcEEEE
Q 039591 209 AALV--GMSKEEKMKIIRHIRKYMKDGGILLV 238 (284)
Q Consensus 209 ~~~~--~~~~~~k~~~l~~~~~~L~pGG~lv~ 238 (284)
+... .........+++.+.++|||||+++.
T Consensus 140 ~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 140 EWMGYCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp CCCBBTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred ccccccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 6421 12234567899999999999999874
No 161
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.36 E-value=4.1e-12 Score=110.83 Aligned_cols=108 Identities=15% Similarity=0.230 Sum_probs=83.7
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhc--------cCCCCCeEEEEcchhhhhc--
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATD--------FEFEKRMKFLTGDILQVKE-- 198 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~--------~~l~~~v~~~~~D~~~~~~-- 198 (284)
.++.+||||||| .|..++.+++ ..++.+|+++|+|+.+++.|+++++.. + + .+++++++|+.+...
T Consensus 48 ~~~~~vLDiGcG-~G~~~~~la~-~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~-~-~nv~~~~~D~~~~l~~~ 123 (246)
T 2vdv_E 48 TKKVTIADIGCG-FGGLMIDLSP-AFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHG-F-QNINVLRGNAMKFLPNF 123 (246)
T ss_dssp SCCEEEEEETCT-TSHHHHHHHH-HSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCST-T-TTEEEEECCTTSCGGGT
T ss_pred CCCCEEEEEcCC-CCHHHHHHHH-hCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccC-C-CcEEEEeccHHHHHHHh
Confidence 467899999999 8999999998 567789999999999999999988764 3 3 579999999987332
Q ss_pred -cCCCccEEEEcCcCCCCHHHH-------HHHHHHHHhccccCcEEEEEe
Q 039591 199 -KLGEYDCIFLAALVGMSKEEK-------MKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 199 -~l~~fD~V~~~~~~~~~~~~k-------~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+.+.+|.|++.....+....+ ..+++.+.+.|+|||+|++.+
T Consensus 124 ~~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 124 FEKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp SCTTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 236799998654322211100 479999999999999999864
No 162
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.36 E-value=3.2e-12 Score=113.34 Aligned_cols=106 Identities=16% Similarity=0.142 Sum_probs=87.5
Q ss_pred ccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEE
Q 039591 127 GVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCI 206 (284)
Q Consensus 127 ~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V 206 (284)
...++.+|||+||| .|..++.+++...++.+|+++|+|+.+++.|+++++..+ +..+++++.+|+.+.. ..+.||+|
T Consensus 109 ~~~~~~~VLDiG~G-~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~-~~~~~D~V 185 (277)
T 1o54_A 109 DVKEGDRIIDTGVG-SGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWG-LIERVTIKVRDISEGF-DEKDVDAL 185 (277)
T ss_dssp TCCTTCEEEEECCT-TSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTT-CGGGEEEECCCGGGCC-SCCSEEEE
T ss_pred CCCCCCEEEEECCc-CCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcC-CCCCEEEEECCHHHcc-cCCccCEE
Confidence 34678899999999 799999998833568899999999999999999988754 4468999999998752 22579999
Q ss_pred EEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEec
Q 039591 207 FLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 207 ~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
+++... ...+++++.+.|+|||++++...
T Consensus 186 ~~~~~~------~~~~l~~~~~~L~pgG~l~~~~~ 214 (277)
T 1o54_A 186 FLDVPD------PWNYIDKCWEALKGGGRFATVCP 214 (277)
T ss_dssp EECCSC------GGGTHHHHHHHEEEEEEEEEEES
T ss_pred EECCcC------HHHHHHHHHHHcCCCCEEEEEeC
Confidence 997532 25789999999999999998764
No 163
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.36 E-value=9.8e-12 Score=110.01 Aligned_cols=105 Identities=13% Similarity=0.211 Sum_probs=78.9
Q ss_pred ccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhcc-CCCccE
Q 039591 127 GVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEK-LGEYDC 205 (284)
Q Consensus 127 ~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~-l~~fD~ 205 (284)
...++.+||||||| .|..++.+++ .+.+|+++|+|+.|++.|++++... ...+.+...+.. .... .+.||+
T Consensus 42 ~l~~g~~VLDlGcG-tG~~a~~La~---~g~~V~gvD~S~~ml~~Ar~~~~~~---~v~~~~~~~~~~-~~~~~~~~fD~ 113 (261)
T 3iv6_A 42 NIVPGSTVAVIGAS-TRFLIEKALE---RGASVTVFDFSQRMCDDLAEALADR---CVTIDLLDITAE-IPKELAGHFDF 113 (261)
T ss_dssp TCCTTCEEEEECTT-CHHHHHHHHH---TTCEEEEEESCHHHHHHHHHHTSSS---CCEEEECCTTSC-CCGGGTTCCSE
T ss_pred CCCCcCEEEEEeCc-chHHHHHHHh---cCCEEEEEECCHHHHHHHHHHHHhc---cceeeeeecccc-cccccCCCccE
Confidence 44778899999999 8999999998 5789999999999999999987541 012222222210 0111 268999
Q ss_pred EEEcCcCC-CCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 206 IFLAALVG-MSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 206 V~~~~~~~-~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|+++...+ ...++...+++++.++| |||++++..
T Consensus 114 Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~ 148 (261)
T 3iv6_A 114 VLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASV 148 (261)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEE
T ss_pred EEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEe
Confidence 99987653 45677788999999999 999999864
No 164
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.36 E-value=4.1e-12 Score=116.29 Aligned_cols=108 Identities=18% Similarity=0.303 Sum_probs=90.0
Q ss_pred CC-CCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhc-cCCCccEE
Q 039591 129 VQ-PKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKE-KLGEYDCI 206 (284)
Q Consensus 129 ~~-~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~-~l~~fD~V 206 (284)
.+ +.+||||||| .|..+..+++ ..|+.+++++|+ +.+++.|++++...+ +.++++|+.+|+.+... ..++||+|
T Consensus 177 ~~~~~~vlDvG~G-~G~~~~~l~~-~~p~~~~~~~D~-~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~~~D~v 252 (352)
T 3mcz_A 177 FARARTVIDLAGG-HGTYLAQVLR-RHPQLTGQIWDL-PTTRDAARKTIHAHD-LGGRVEFFEKNLLDARNFEGGAADVV 252 (352)
T ss_dssp GTTCCEEEEETCT-TCHHHHHHHH-HCTTCEEEEEEC-GGGHHHHHHHHHHTT-CGGGEEEEECCTTCGGGGTTCCEEEE
T ss_pred cCCCCEEEEeCCC-cCHHHHHHHH-hCCCCeEEEEEC-HHHHHHHHHHHHhcC-CCCceEEEeCCcccCcccCCCCccEE
Confidence 45 7899999999 8999999988 578899999999 889999999987744 56789999999987531 22569999
Q ss_pred EEcCcCC-CCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 207 FLAALVG-MSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 207 ~~~~~~~-~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
++....+ +..++...+++++.+.|+|||++++..
T Consensus 253 ~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (352)
T 3mcz_A 253 MLNDCLHYFDAREAREVIGHAAGLVKPGGALLILT 287 (352)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 9877553 455567899999999999999998865
No 165
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.36 E-value=6.4e-12 Score=108.83 Aligned_cols=103 Identities=17% Similarity=0.190 Sum_probs=86.2
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEE
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIF 207 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~ 207 (284)
..++++|||+||| .|..++.+++ . +.+|+++|+|+.+++.|+++.+..+ +..+++++.+|+.+.....+.||+|+
T Consensus 89 ~~~~~~vldiG~G-~G~~~~~l~~-~--~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~D~v~ 163 (248)
T 2yvl_A 89 LNKEKRVLEFGTG-SGALLAVLSE-V--AGEVWTFEAVEEFYKTAQKNLKKFN-LGKNVKFFNVDFKDAEVPEGIFHAAF 163 (248)
T ss_dssp CCTTCEEEEECCT-TSHHHHHHHH-H--SSEEEEECSCHHHHHHHHHHHHHTT-CCTTEEEECSCTTTSCCCTTCBSEEE
T ss_pred CCCCCEEEEeCCC-ccHHHHHHHH-h--CCEEEEEecCHHHHHHHHHHHHHcC-CCCcEEEEEcChhhcccCCCcccEEE
Confidence 3678899999999 8999999998 3 7899999999999999999987754 55789999999987431236799999
Q ss_pred EcCcCCCCHHHHHHHHHHHHhccccCcEEEEEec
Q 039591 208 LAALVGMSKEEKMKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 208 ~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
++... ...+++++.+.|+|||++++...
T Consensus 164 ~~~~~------~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 164 VDVRE------PWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp ECSSC------GGGGHHHHHHHBCTTCEEEEEES
T ss_pred ECCcC------HHHHHHHHHHHcCCCCEEEEEeC
Confidence 87542 25789999999999999998774
No 166
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.36 E-value=3.1e-12 Score=112.64 Aligned_cols=113 Identities=14% Similarity=0.041 Sum_probs=84.9
Q ss_pred hhccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHH------HHHHHHHHHhhccCCCCCeEEEEcc-h--hh
Q 039591 125 ENGVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEA------ANNVARRIVATDFEFEKRMKFLTGD-I--LQ 195 (284)
Q Consensus 125 ~~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~------~~~~A~~~~~~~~~l~~~v~~~~~D-~--~~ 195 (284)
.....++.+||||||| .|..+..++++..+..+|+++|+|+. +++.|++++...+ +..+++++.+| . ..
T Consensus 38 ~~~~~~~~~vLDiGcG-~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~ 115 (275)
T 3bkx_A 38 AWQVKPGEKILEIGCG-QGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGP-LGDRLTVHFNTNLSDDL 115 (275)
T ss_dssp HHTCCTTCEEEEESCT-TSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTST-TGGGEEEECSCCTTTCC
T ss_pred HcCCCCCCEEEEeCCC-CCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcC-CCCceEEEECChhhhcc
Confidence 3345788999999999 89999999883235589999999998 9999999987644 45689999998 3 22
Q ss_pred hhccCCCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 196 VKEKLGEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 196 ~~~~l~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.....+.||+|++.....+. .+...+++.+.+.++|||++++..
T Consensus 116 ~~~~~~~fD~v~~~~~l~~~-~~~~~~~~~~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 116 GPIADQHFDRVVLAHSLWYF-ASANALALLFKNMAAVCDHVDVAE 159 (275)
T ss_dssp GGGTTCCCSEEEEESCGGGS-SCHHHHHHHHHHHTTTCSEEEEEE
T ss_pred CCCCCCCEEEEEEccchhhC-CCHHHHHHHHHHHhCCCCEEEEEE
Confidence 22233789999987655332 223457777777777899999864
No 167
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.36 E-value=1.2e-12 Score=115.08 Aligned_cols=99 Identities=11% Similarity=0.126 Sum_probs=82.5
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEE
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIF 207 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~ 207 (284)
..++.+||||||| .|..+..+++ ++.+|+++|+|+.+++.|++.. +++|+++|+.+.....+.||+|+
T Consensus 32 ~~~~~~vLDiGcG-~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~--------~~~~~~~d~~~~~~~~~~fD~v~ 99 (261)
T 3ege_A 32 LPKGSVIADIGAG-TGGYSVALAN---QGLFVYAVEPSIVMRQQAVVHP--------QVEWFTGYAENLALPDKSVDGVI 99 (261)
T ss_dssp CCTTCEEEEETCT-TSHHHHHHHT---TTCEEEEECSCHHHHHSSCCCT--------TEEEECCCTTSCCSCTTCBSEEE
T ss_pred CCCCCEEEEEcCc-ccHHHHHHHh---CCCEEEEEeCCHHHHHHHHhcc--------CCEEEECchhhCCCCCCCEeEEE
Confidence 4678999999999 8999999997 7899999999999998776542 79999999987544447899999
Q ss_pred EcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 208 LAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 208 ~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+....++. ++...+++++.+.|| ||.+++..
T Consensus 100 ~~~~l~~~-~~~~~~l~~~~~~Lk-gG~~~~~~ 130 (261)
T 3ege_A 100 SILAIHHF-SHLEKSFQEMQRIIR-DGTIVLLT 130 (261)
T ss_dssp EESCGGGC-SSHHHHHHHHHHHBC-SSCEEEEE
T ss_pred EcchHhhc-cCHHHHHHHHHHHhC-CcEEEEEE
Confidence 98766444 567899999999999 99776655
No 168
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.35 E-value=3.3e-12 Score=108.11 Aligned_cols=106 Identities=19% Similarity=0.173 Sum_probs=83.0
Q ss_pred HHHHHHhhccCCCCeEEEecCCCChHHHHHHHhhcCCCc-EEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhh
Q 039591 119 ECRILKENGVVQPKKVAFVGSGPMPLTSIVMAKNHLKAT-HFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVK 197 (284)
Q Consensus 119 E~~~l~~~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~-~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~ 197 (284)
+...+.... .++.+|||+||| .|..+..+ +. +|+++|+|+.+++.|+++. .+++++++|+.+..
T Consensus 26 ~~~~l~~~~-~~~~~vLdiG~G-~G~~~~~l------~~~~v~~vD~s~~~~~~a~~~~-------~~~~~~~~d~~~~~ 90 (211)
T 2gs9_A 26 EERALKGLL-PPGESLLEVGAG-TGYWLRRL------PYPQKVGVEPSEAMLAVGRRRA-------PEATWVRAWGEALP 90 (211)
T ss_dssp HHHHHHTTC-CCCSEEEEETCT-TCHHHHHC------CCSEEEEECCCHHHHHHHHHHC-------TTSEEECCCTTSCC
T ss_pred HHHHHHHhc-CCCCeEEEECCC-CCHhHHhC------CCCeEEEEeCCHHHHHHHHHhC-------CCcEEEEcccccCC
Confidence 344455444 378899999999 78766444 45 8999999999999999874 35889999998754
Q ss_pred ccCCCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 198 EKLGEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 198 ~~l~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
...+.||+|++.....+. ++..++++++.+.|||||++++..
T Consensus 91 ~~~~~fD~v~~~~~l~~~-~~~~~~l~~~~~~L~pgG~l~i~~ 132 (211)
T 2gs9_A 91 FPGESFDVVLLFTTLEFV-EDVERVLLEARRVLRPGGALVVGV 132 (211)
T ss_dssp SCSSCEEEEEEESCTTTC-SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCcEEEEEEcChhhhc-CCHHHHHHHHHHHcCCCCEEEEEe
Confidence 334689999988765443 356789999999999999999876
No 169
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.35 E-value=4e-12 Score=108.19 Aligned_cols=100 Identities=14% Similarity=0.117 Sum_probs=81.9
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCC--CCCeEEEEcchhhh----------
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEF--EKRMKFLTGDILQV---------- 196 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l--~~~v~~~~~D~~~~---------- 196 (284)
.++++|||+||| ++++++|+ . ++++|+++|.|++..+.|++++++.| + .++++++.+|+.+.
T Consensus 29 ~~a~~VLEiGtG---ySTl~lA~-~-~~g~VvtvE~d~~~~~~ar~~l~~~g-~~~~~~I~~~~gda~~~~~wg~p~~~~ 102 (202)
T 3cvo_A 29 EEAEVILEYGSG---GSTVVAAE-L-PGKHVTSVESDRAWARMMKAWLAANP-PAEGTEVNIVWTDIGPTGDWGHPVSDA 102 (202)
T ss_dssp HHCSEEEEESCS---HHHHHHHT-S-TTCEEEEEESCHHHHHHHHHHHHHSC-CCTTCEEEEEECCCSSBCGGGCBSSST
T ss_pred hCCCEEEEECch---HHHHHHHH-c-CCCEEEEEeCCHHHHHHHHHHHHHcC-CCCCCceEEEEeCchhhhcccccccch
Confidence 467899999996 69999998 3 48999999999999999999998855 5 67999999996542
Q ss_pred --------h-----c-cCCCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 197 --------K-----E-KLGEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 197 --------~-----~-~l~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
. . ..++||+||+++... ...+..+.+.|+|||+|++.+
T Consensus 103 ~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k~------~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 103 KWRSYPDYPLAVWRTEGFRHPDVVLVDGRFR------VGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp TGGGTTHHHHGGGGCTTCCCCSEEEECSSSH------HHHHHHHHHHCSSCEEEEETT
T ss_pred hhhhHHHHhhhhhccccCCCCCEEEEeCCCc------hhHHHHHHHhcCCCeEEEEeC
Confidence 1 0 126799999998652 366777889999999998876
No 170
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.35 E-value=2.2e-12 Score=111.63 Aligned_cols=107 Identities=12% Similarity=0.045 Sum_probs=79.1
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCC-HHHHHHH---HHHHhhccCCCCCeEEEEcchhhhhccC-CC
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDID-EAANNVA---RRIVATDFEFEKRMKFLTGDILQVKEKL-GE 202 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis-~~~~~~A---~~~~~~~~~l~~~v~~~~~D~~~~~~~l-~~ 202 (284)
..++.+||||||| .|..++.+++ ..++.+|+|+|+| +.+++.| ++++...+ + .+++|+++|+.+..... +.
T Consensus 22 ~~~~~~vLDiGCG-~G~~~~~la~-~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~-~-~~v~~~~~d~~~l~~~~~d~ 97 (225)
T 3p2e_A 22 GQFDRVHIDLGTG-DGRNIYKLAI-NDQNTFYIGIDPVKENLFDISKKIIKKPSKGG-L-SNVVFVIAAAESLPFELKNI 97 (225)
T ss_dssp TTCSEEEEEETCT-TSHHHHHHHH-TCTTEEEEEECSCCGGGHHHHHHHTSCGGGTC-C-SSEEEECCBTTBCCGGGTTC
T ss_pred CCCCCEEEEEecc-CcHHHHHHHH-hCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcC-C-CCeEEEEcCHHHhhhhccCe
Confidence 3678899999999 8999999996 4688999999999 6666666 77766544 3 47999999998764322 55
Q ss_pred ccEEEEcCcCCCC----HHHHHHHHHHHHhccccCcEEEE
Q 039591 203 YDCIFLAALVGMS----KEEKMKIIRHIRKYMKDGGILLV 238 (284)
Q Consensus 203 fD~V~~~~~~~~~----~~~k~~~l~~~~~~L~pGG~lv~ 238 (284)
+|.|++....... ..+...+++++.++|||||++++
T Consensus 98 v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 98 ADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp EEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred EEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 6666665432100 00125689999999999999998
No 171
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.35 E-value=7e-12 Score=115.59 Aligned_cols=106 Identities=22% Similarity=0.234 Sum_probs=87.6
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+||||||| .|..+..+++ ..++.+++++|+ +.+++.|++++...+ +.++++|+.+|+.+.. + ..||+|++
T Consensus 181 ~~~~~vlDvG~G-~G~~~~~l~~-~~~~~~~~~~D~-~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~-~-~~~D~v~~ 254 (374)
T 1qzz_A 181 SAVRHVLDVGGG-NGGMLAAIAL-RAPHLRGTLVEL-AGPAERARRRFADAG-LADRVTVAEGDFFKPL-P-VTADVVLL 254 (374)
T ss_dssp TTCCEEEEETCT-TSHHHHHHHH-HCTTCEEEEEEC-HHHHHHHHHHHHHTT-CTTTEEEEECCTTSCC-S-CCEEEEEE
T ss_pred CCCCEEEEECCC-cCHHHHHHHH-HCCCCEEEEEeC-HHHHHHHHHHHHhcC-CCCceEEEeCCCCCcC-C-CCCCEEEE
Confidence 567899999999 8999999988 568899999999 999999999987754 5568999999987522 1 35999998
Q ss_pred cCcCC-CCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 209 AALVG-MSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~~-~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
....+ +..++..++++++.+.|+|||++++..
T Consensus 255 ~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (374)
T 1qzz_A 255 SFVLLNWSDEDALTILRGCVRALEPGGRLLVLD 287 (374)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eccccCCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 77553 444455799999999999999888754
No 172
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.35 E-value=6e-12 Score=114.08 Aligned_cols=103 Identities=20% Similarity=0.264 Sum_probs=83.8
Q ss_pred ccCCCCeEEEecCCCChHHHHHHHhhcCC-CcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccE
Q 039591 127 GVVQPKKVAFVGSGPMPLTSIVMAKNHLK-ATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDC 205 (284)
Q Consensus 127 ~~~~~~~VL~iGsGp~G~~ai~la~~~~~-~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~ 205 (284)
...++.+||||||| .|..++.+++ ..+ +.+|+++|+|+++++.|+++++..+ + .+++++++|+.+.....++||+
T Consensus 72 ~~~~~~~VLDiGcG-~G~~~~~la~-~~~~~~~v~gvD~s~~~~~~a~~~~~~~g-~-~~v~~~~~d~~~~~~~~~~fD~ 147 (317)
T 1dl5_A 72 GLDKGMRVLEIGGG-TGYNAAVMSR-VVGEKGLVVSVEYSRKICEIAKRNVERLG-I-ENVIFVCGDGYYGVPEFSPYDV 147 (317)
T ss_dssp TCCTTCEEEEECCT-TSHHHHHHHH-HHCTTCEEEEEESCHHHHHHHHHHHHHTT-C-CSEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCcCEEEEecCC-chHHHHHHHH-hcCCCCEEEEEECCHHHHHHHHHHHHHcC-C-CCeEEEECChhhccccCCCeEE
Confidence 44788999999999 7999999988 334 4789999999999999999988755 3 4599999999874433478999
Q ss_pred EEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 206 IFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 206 V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|+++...... .+.+.+.|||||++++..
T Consensus 148 Iv~~~~~~~~-------~~~~~~~LkpgG~lvi~~ 175 (317)
T 1dl5_A 148 IFVTVGVDEV-------PETWFTQLKEGGRVIVPI 175 (317)
T ss_dssp EEECSBBSCC-------CHHHHHHEEEEEEEEEEB
T ss_pred EEEcCCHHHH-------HHHHHHhcCCCcEEEEEE
Confidence 9998866433 156788999999999865
No 173
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.35 E-value=3.5e-12 Score=113.38 Aligned_cols=109 Identities=13% Similarity=0.095 Sum_probs=85.3
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCC-cEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhcc----CCC
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKA-THFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEK----LGE 202 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~-~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~----l~~ 202 (284)
..++.+|||+|||| |..+..+++ ..++ ++|+++|+|+.+++.++++++..+ + .+++++++|+.+.... .+.
T Consensus 81 ~~~g~~VLDlgaG~-G~~t~~la~-~~~~~~~v~avD~~~~~l~~~~~~~~~~g-~-~~v~~~~~D~~~~~~~~~~~~~~ 156 (274)
T 3ajd_A 81 PREDDFILDMCAAP-GGKTTHLAQ-LMKNKGTIVAVEISKTRTKALKSNINRMG-V-LNTIIINADMRKYKDYLLKNEIF 156 (274)
T ss_dssp CCTTCEEEETTCTT-CHHHHHHHH-HTTTCSEEEEEESCHHHHHHHHHHHHHTT-C-CSEEEEESCHHHHHHHHHHTTCC
T ss_pred CCCcCEEEEeCCCc-cHHHHHHHH-HcCCCCEEEEECCCHHHHHHHHHHHHHhC-C-CcEEEEeCChHhcchhhhhcccc
Confidence 46788999999995 556666776 3455 899999999999999999998866 3 4899999999876432 368
Q ss_pred ccEEEEcCcC---CCCH--------------HHHHHHHHHHHhccccCcEEEEEe
Q 039591 203 YDCIFLAALV---GMSK--------------EEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 203 fD~V~~~~~~---~~~~--------------~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
||+|+++++. +... ....++++++.+.|||||++++.+
T Consensus 157 fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~st 211 (274)
T 3ajd_A 157 FDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYST 211 (274)
T ss_dssp EEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 9999998543 1110 223789999999999999999865
No 174
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.35 E-value=3.1e-12 Score=109.92 Aligned_cols=100 Identities=20% Similarity=0.284 Sum_probs=80.9
Q ss_pred ccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEE
Q 039591 127 GVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCI 206 (284)
Q Consensus 127 ~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V 206 (284)
...++.+|||+||| .|..+..+++ . +.+|+++|+|+.+++.|+++....+ +++++++|+.+.....+.||+|
T Consensus 67 ~~~~~~~vLdiG~G-~G~~~~~l~~-~--~~~v~~vD~~~~~~~~a~~~~~~~~----~v~~~~~d~~~~~~~~~~fD~v 138 (231)
T 1vbf_A 67 DLHKGQKVLEIGTG-IGYYTALIAE-I--VDKVVSVEINEKMYNYASKLLSYYN----NIKLILGDGTLGYEEEKPYDRV 138 (231)
T ss_dssp TCCTTCEEEEECCT-TSHHHHHHHH-H--SSEEEEEESCHHHHHHHHHHHTTCS----SEEEEESCGGGCCGGGCCEEEE
T ss_pred CCCCCCEEEEEcCC-CCHHHHHHHH-H--cCEEEEEeCCHHHHHHHHHHHhhcC----CeEEEECCcccccccCCCccEE
Confidence 34678899999999 7999999988 2 3899999999999999999987532 7999999998633333789999
Q ss_pred EEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEec
Q 039591 207 FLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 207 ~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
+++...... .+++.+.|+|||++++...
T Consensus 139 ~~~~~~~~~-------~~~~~~~L~pgG~l~~~~~ 166 (231)
T 1vbf_A 139 VVWATAPTL-------LCKPYEQLKEGGIMILPIG 166 (231)
T ss_dssp EESSBBSSC-------CHHHHHTEEEEEEEEEEEC
T ss_pred EECCcHHHH-------HHHHHHHcCCCcEEEEEEc
Confidence 998766432 2468889999999998763
No 175
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.35 E-value=5.4e-12 Score=114.50 Aligned_cols=111 Identities=20% Similarity=0.172 Sum_probs=85.9
Q ss_pred ccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEE
Q 039591 127 GVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCI 206 (284)
Q Consensus 127 ~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V 206 (284)
...++.+|||+||| .|..++.+++...++++|+++|+|+.+++.++++++..+ + .+++++++|+.+.....+.||+|
T Consensus 115 ~~~~g~~VLDlg~G-~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g-~-~~v~~~~~D~~~~~~~~~~fD~I 191 (315)
T 1ixk_A 115 DPKPGEIVADMAAA-PGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLG-V-LNVILFHSSSLHIGELNVEFDKI 191 (315)
T ss_dssp CCCTTCEEEECCSS-CSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHT-C-CSEEEESSCGGGGGGGCCCEEEE
T ss_pred CCCCCCEEEEeCCC-CCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhC-C-CeEEEEECChhhcccccccCCEE
Confidence 34778899999999 566667777623345899999999999999999998866 3 47999999998754323689999
Q ss_pred EEcCcC---CCC---H---------------HHHHHHHHHHHhccccCcEEEEEe
Q 039591 207 FLAALV---GMS---K---------------EEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 207 ~~~~~~---~~~---~---------------~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+++++. +.. + ....++++++.+.|||||++++.+
T Consensus 192 l~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~st 246 (315)
T 1ixk_A 192 LLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYST 246 (315)
T ss_dssp EEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEe
Confidence 997542 211 1 112689999999999999999865
No 176
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.34 E-value=1.9e-12 Score=113.07 Aligned_cols=110 Identities=15% Similarity=0.134 Sum_probs=84.3
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhc-CCCcEEEEEeCCHHHHHHHHHHHhhc---cCCCCC-------------------
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNH-LKATHFDNFDIDEAANNVARRIVATD---FEFEKR------------------- 185 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~-~~~~~V~~vDis~~~~~~A~~~~~~~---~~l~~~------------------- 185 (284)
.++.+|||+||| .|..++.+++.. .++.+|+++|+|+.+++.|++++... + +..+
T Consensus 50 ~~~~~vLD~gcG-sG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 127 (250)
T 1o9g_A 50 DGPVTLWDPCCG-SGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAG-LTARELERREQSERFGKPSYLEA 127 (250)
T ss_dssp CSCEEEEETTCT-TSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHH-HHHHHHHHHHHHHHHCCHHHHHH
T ss_pred CCCCeEEECCCC-CCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhcc-ccccchhhhhhhhhcccccchhh
Confidence 367899999999 899999998721 35789999999999999999987653 2 2222
Q ss_pred ------eE-------------EEEcchhhhhc-----cCCCccEEEEcCcCCC-C-------HHHHHHHHHHHHhccccC
Q 039591 186 ------MK-------------FLTGDILQVKE-----KLGEYDCIFLAALVGM-S-------KEEKMKIIRHIRKYMKDG 233 (284)
Q Consensus 186 ------v~-------------~~~~D~~~~~~-----~l~~fD~V~~~~~~~~-~-------~~~k~~~l~~~~~~L~pG 233 (284)
++ |.++|+.+... .-..||+|+++.+... . .+....+++++.++|+||
T Consensus 128 ~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 207 (250)
T 1o9g_A 128 AQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAH 207 (250)
T ss_dssp HHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTT
T ss_pred hhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCC
Confidence 66 99999987432 2248999999864321 1 255678999999999999
Q ss_pred cEEEEEe
Q 039591 234 GILLVRS 240 (284)
Q Consensus 234 G~lv~~~ 240 (284)
|++++..
T Consensus 208 G~l~~~~ 214 (250)
T 1o9g_A 208 AVIAVTD 214 (250)
T ss_dssp CEEEEEE
T ss_pred cEEEEeC
Confidence 9999843
No 177
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.34 E-value=2.9e-12 Score=110.85 Aligned_cols=103 Identities=17% Similarity=0.178 Sum_probs=81.4
Q ss_pred ccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEE
Q 039591 127 GVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCI 206 (284)
Q Consensus 127 ~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V 206 (284)
...++.+|||+||| .|..+..+++ ..+ .+|+++|+++.+++.|+++++..+ + .+++++.+|+.....+..+||+|
T Consensus 88 ~~~~~~~vLdiG~G-~G~~~~~la~-~~~-~~v~~vD~~~~~~~~a~~~~~~~~-~-~~v~~~~~d~~~~~~~~~~fD~I 162 (235)
T 1jg1_A 88 NLKPGMNILEVGTG-SGWNAALISE-IVK-TDVYTIERIPELVEFAKRNLERAG-V-KNVHVILGDGSKGFPPKAPYDVI 162 (235)
T ss_dssp TCCTTCCEEEECCT-TSHHHHHHHH-HHC-SCEEEEESCHHHHHHHHHHHHHTT-C-CSEEEEESCGGGCCGGGCCEEEE
T ss_pred CCCCCCEEEEEeCC-cCHHHHHHHH-HhC-CEEEEEeCCHHHHHHHHHHHHHcC-C-CCcEEEECCcccCCCCCCCccEE
Confidence 34678899999999 8999999998 334 899999999999999999988755 3 45999999984322222469999
Q ss_pred EEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEec
Q 039591 207 FLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 207 ~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
+++...... .+.+.+.|+|||++++...
T Consensus 163 i~~~~~~~~-------~~~~~~~L~pgG~lvi~~~ 190 (235)
T 1jg1_A 163 IVTAGAPKI-------PEPLIEQLKIGGKLIIPVG 190 (235)
T ss_dssp EECSBBSSC-------CHHHHHTEEEEEEEEEEEC
T ss_pred EECCcHHHH-------HHHHHHhcCCCcEEEEEEe
Confidence 998765322 2467889999999998764
No 178
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.34 E-value=7.3e-12 Score=115.10 Aligned_cols=106 Identities=20% Similarity=0.256 Sum_probs=84.7
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEE
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIF 207 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~ 207 (284)
..++.+||||||| .|..++.+++ .+..+|+++|+|+ +++.|+++++..+ +.++++++.+|+.+...+ ++||+|+
T Consensus 48 ~~~~~~VLDiGcG-tG~ls~~la~--~g~~~V~~vD~s~-~~~~a~~~~~~~~-l~~~v~~~~~d~~~~~~~-~~~D~Iv 121 (348)
T 2y1w_A 48 DFKDKIVLDVGCG-SGILSFFAAQ--AGARKIYAVEAST-MAQHAEVLVKSNN-LTDRIVVIPGKVEEVSLP-EQVDIII 121 (348)
T ss_dssp GTTTCEEEEETCT-TSHHHHHHHH--TTCSEEEEEECST-HHHHHHHHHHHTT-CTTTEEEEESCTTTCCCS-SCEEEEE
T ss_pred cCCcCEEEEcCCC-ccHHHHHHHh--CCCCEEEEECCHH-HHHHHHHHHHHcC-CCCcEEEEEcchhhCCCC-CceeEEE
Confidence 3678899999999 8999999888 3556999999997 8899999987744 667899999999875322 6899999
Q ss_pred EcCcC-CCCHHHHHHHHHHHHhccccCcEEEEE
Q 039591 208 LAALV-GMSKEEKMKIIRHIRKYMKDGGILLVR 239 (284)
Q Consensus 208 ~~~~~-~~~~~~k~~~l~~~~~~L~pGG~lv~~ 239 (284)
+.... +...+.....+.++.+.|+|||++++.
T Consensus 122 s~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 122 SEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp ECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred EeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 87543 222344567888899999999999854
No 179
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.34 E-value=2.9e-12 Score=113.84 Aligned_cols=103 Identities=15% Similarity=0.132 Sum_probs=86.2
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEE
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIF 207 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~ 207 (284)
..++++|||+||| .|..++.+|+ ..++.+|+++|+|+.+++.|+++++..+ + .+++|+++|+.+. ...+.||+|+
T Consensus 117 ~~~~~~VLDlgcG-~G~~s~~la~-~~~~~~V~~vD~s~~av~~a~~n~~~n~-l-~~~~~~~~d~~~~-~~~~~~D~Vi 191 (272)
T 3a27_A 117 SNENEVVVDMFAG-IGYFTIPLAK-YSKPKLVYAIEKNPTAYHYLCENIKLNK-L-NNVIPILADNRDV-ELKDVADRVI 191 (272)
T ss_dssp CCTTCEEEETTCT-TTTTHHHHHH-HTCCSEEEEEECCHHHHHHHHHHHHHTT-C-SSEEEEESCGGGC-CCTTCEEEEE
T ss_pred cCCCCEEEEecCc-CCHHHHHHHH-hCCCCEEEEEeCCHHHHHHHHHHHHHcC-C-CCEEEEECChHHc-CccCCceEEE
Confidence 3678899999999 8999999998 4456799999999999999999988744 4 4689999999876 3236899999
Q ss_pred EcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 208 LAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 208 ~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
++.+.+ ..++++.+.+.|+|||++++..
T Consensus 192 ~d~p~~-----~~~~l~~~~~~LkpgG~l~~s~ 219 (272)
T 3a27_A 192 MGYVHK-----THKFLDKTFEFLKDRGVIHYHE 219 (272)
T ss_dssp ECCCSS-----GGGGHHHHHHHEEEEEEEEEEE
T ss_pred ECCccc-----HHHHHHHHHHHcCCCCEEEEEE
Confidence 997642 2568899999999999998765
No 180
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.34 E-value=4.1e-12 Score=112.72 Aligned_cols=104 Identities=14% Similarity=0.057 Sum_probs=85.8
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhc-cCCCCCeEEEEcchhhhhccCCCccEE
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATD-FEFEKRMKFLTGDILQVKEKLGEYDCI 206 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~-~~l~~~v~~~~~D~~~~~~~l~~fD~V 206 (284)
..++.+|||+||| .|..++.+++...++.+|+++|+++.+++.|+++++.. + ..+++++++|+.+. ...+.||+|
T Consensus 108 ~~~~~~VLD~G~G-~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g--~~~v~~~~~d~~~~-~~~~~fD~V 183 (275)
T 1yb2_A 108 LRPGMDILEVGVG-SGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYD--IGNVRTSRSDIADF-ISDQMYDAV 183 (275)
T ss_dssp CCTTCEEEEECCT-TSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSC--CTTEEEECSCTTTC-CCSCCEEEE
T ss_pred CCCcCEEEEecCC-CCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCC--CCcEEEEECchhcc-CcCCCccEE
Confidence 3678899999999 88888888883356889999999999999999998775 4 26799999999863 223679999
Q ss_pred EEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEec
Q 039591 207 FLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 207 ~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
+++.. +...+++++.+.|+|||++++...
T Consensus 184 i~~~~------~~~~~l~~~~~~LkpgG~l~i~~~ 212 (275)
T 1yb2_A 184 IADIP------DPWNHVQKIASMMKPGSVATFYLP 212 (275)
T ss_dssp EECCS------CGGGSHHHHHHTEEEEEEEEEEES
T ss_pred EEcCc------CHHHHHHHHHHHcCCCCEEEEEeC
Confidence 98543 225899999999999999998763
No 181
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.34 E-value=1.4e-12 Score=113.62 Aligned_cols=100 Identities=12% Similarity=0.156 Sum_probs=80.1
Q ss_pred CCCCeEEEecCCCChHHHHHHHhh---cCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhh--hccC--C
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKN---HLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQV--KEKL--G 201 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~---~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~--~~~l--~ 201 (284)
.++.+||||||| .|..++.+++. ..++++|+++|+|+.+++.|+. +..+++++++|+.+. .... .
T Consensus 80 ~~~~~VLDiG~G-tG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~-------~~~~v~~~~gD~~~~~~l~~~~~~ 151 (236)
T 2bm8_A 80 LRPRTIVELGVY-NGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS-------DMENITLHQGDCSDLTTFEHLREM 151 (236)
T ss_dssp HCCSEEEEECCT-TSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG-------GCTTEEEEECCSSCSGGGGGGSSS
T ss_pred cCCCEEEEEeCC-CCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc-------cCCceEEEECcchhHHHHHhhccC
Confidence 357899999999 89999999983 1478999999999999998872 236899999999874 1222 3
Q ss_pred CccEEEEcCcCCCCHHHHHHHHHHHHh-ccccCcEEEEEe
Q 039591 202 EYDCIFLAALVGMSKEEKMKIIRHIRK-YMKDGGILLVRS 240 (284)
Q Consensus 202 ~fD~V~~~~~~~~~~~~k~~~l~~~~~-~L~pGG~lv~~~ 240 (284)
.||+|++++... +...+++++.+ .|||||++++..
T Consensus 152 ~fD~I~~d~~~~----~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 152 AHPLIFIDNAHA----NTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp CSSEEEEESSCS----SHHHHHHHHHHHTCCTTCEEEECS
T ss_pred CCCEEEECCchH----hHHHHHHHHHHhhCCCCCEEEEEe
Confidence 699999887532 34678999997 999999999964
No 182
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.33 E-value=1.6e-12 Score=113.56 Aligned_cols=106 Identities=16% Similarity=0.152 Sum_probs=75.9
Q ss_pred CCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhh-hccC-----CCc
Q 039591 130 QPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQV-KEKL-----GEY 203 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~-~~~l-----~~f 203 (284)
++.+|||+||| .|..++.+++ ..++.+|+++|+|+.+++.|+++++..+ +..+++++++|+.+. ...+ +.|
T Consensus 65 ~~~~vLDlG~G-~G~~~~~la~-~~~~~~v~gvD~s~~~~~~a~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (254)
T 2h00_A 65 TLRRGIDIGTG-ASCIYPLLGA-TLNGWYFLATEVDDMCFNYAKKNVEQNN-LSDLIKVVKVPQKTLLMDALKEESEIIY 141 (254)
T ss_dssp CCCEEEEESCT-TTTHHHHHHH-HHHCCEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEECCTTCSSTTTSTTCCSCCB
T ss_pred CCCEEEEeCCC-hhHHHHHHHH-hCCCCeEEEEECCHHHHHHHHHHHHHcC-CCccEEEEEcchhhhhhhhhhcccCCcc
Confidence 57799999999 8888888887 3467899999999999999999988755 556799999997652 2122 479
Q ss_pred cEEEEcCcCCCCH--------------HHHHHHHHHHHhccccCcEEEE
Q 039591 204 DCIFLAALVGMSK--------------EEKMKIIRHIRKYMKDGGILLV 238 (284)
Q Consensus 204 D~V~~~~~~~~~~--------------~~k~~~l~~~~~~L~pGG~lv~ 238 (284)
|+|+++.+..... +++..++..+.++|||||.+.+
T Consensus 142 D~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~ 190 (254)
T 2h00_A 142 DFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEF 190 (254)
T ss_dssp SEEEECCCCC-------------------------CTTTTHHHHTHHHH
T ss_pred cEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEE
Confidence 9999986543211 1223566778888888887654
No 183
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.33 E-value=6.7e-12 Score=107.93 Aligned_cols=91 Identities=11% Similarity=0.085 Sum_probs=76.8
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhh-hhcc-CCCccEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQ-VKEK-LGEYDCI 206 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~-~~~~-l~~fD~V 206 (284)
.++.+|||+||| .|..+..+++ .+.+|+++|+|+.+++.|+++ . .+++|+++|+.+ .... .+.||+|
T Consensus 47 ~~~~~vLDiGcG-~G~~~~~l~~---~~~~v~~vD~s~~~~~~a~~~----~---~~~~~~~~d~~~~~~~~~~~~fD~v 115 (226)
T 3m33_A 47 TPQTRVLEAGCG-HGPDAARFGP---QAARWAAYDFSPELLKLARAN----A---PHADVYEWNGKGELPAGLGAPFGLI 115 (226)
T ss_dssp CTTCEEEEESCT-TSHHHHHHGG---GSSEEEEEESCHHHHHHHHHH----C---TTSEEEECCSCSSCCTTCCCCEEEE
T ss_pred CCCCeEEEeCCC-CCHHHHHHHH---cCCEEEEEECCHHHHHHHHHh----C---CCceEEEcchhhccCCcCCCCEEEE
Confidence 678899999999 8999999998 378999999999999999988 1 468999999954 2233 3689999
Q ss_pred EEcCcCCCCHHHHHHHHHHHHhccccCcEEE
Q 039591 207 FLAALVGMSKEEKMKIIRHIRKYMKDGGILL 237 (284)
Q Consensus 207 ~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv 237 (284)
++.... ..+++++.+.|||||+++
T Consensus 116 ~~~~~~-------~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 116 VSRRGP-------TSVILRLPELAAPDAHFL 139 (226)
T ss_dssp EEESCC-------SGGGGGHHHHEEEEEEEE
T ss_pred EeCCCH-------HHHHHHHHHHcCCCcEEE
Confidence 987432 578899999999999999
No 184
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.32 E-value=4.1e-12 Score=116.45 Aligned_cols=106 Identities=20% Similarity=0.257 Sum_probs=87.9
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEE
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIF 207 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~ 207 (284)
..++.+|||+||| .|..++.+++ ..++.+|+++|+|+.+++.|++++...+ ..++++.+|+.+.. .+.||+|+
T Consensus 194 ~~~~~~VLDlGcG-~G~~~~~la~-~~~~~~v~~vD~s~~~l~~a~~~~~~~~---~~~~~~~~d~~~~~--~~~fD~Iv 266 (343)
T 2pjd_A 194 PHTKGKVLDVGCG-AGVLSVAFAR-HSPKIRLTLCDVSAPAVEASRATLAANG---VEGEVFASNVFSEV--KGRFDMII 266 (343)
T ss_dssp TTCCSBCCBTTCT-TSHHHHHHHH-HCTTCBCEEEESBHHHHHHHHHHHHHTT---CCCEEEECSTTTTC--CSCEEEEE
T ss_pred cCCCCeEEEecCc-cCHHHHHHHH-HCCCCEEEEEECCHHHHHHHHHHHHHhC---CCCEEEEccccccc--cCCeeEEE
Confidence 3567799999999 8999999998 5677899999999999999999987744 34678899987643 36899999
Q ss_pred EcCcCCC----CHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 208 LAALVGM----SKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 208 ~~~~~~~----~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
++...+. ...+...+++++.++|||||.+++..
T Consensus 267 ~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 303 (343)
T 2pjd_A 267 SNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVA 303 (343)
T ss_dssp ECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred ECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 9876643 23567899999999999999998865
No 185
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.32 E-value=7.4e-12 Score=114.20 Aligned_cols=107 Identities=18% Similarity=0.223 Sum_probs=83.3
Q ss_pred ccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhcc------C---CCCCeEEEEcchhhhh
Q 039591 127 GVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDF------E---FEKRMKFLTGDILQVK 197 (284)
Q Consensus 127 ~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~------~---l~~~v~~~~~D~~~~~ 197 (284)
...++.+|||+||| .|..++.+++...+..+|+++|+++.+++.|+++++..+ . ...+++++.+|+.+..
T Consensus 102 ~~~~g~~VLDiG~G-~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~ 180 (336)
T 2b25_A 102 DINPGDTVLEAGSG-SGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGAT 180 (336)
T ss_dssp TCCTTCEEEEECCT-TSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC
T ss_pred CCCCCCEEEEeCCC-cCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcc
Confidence 34788999999999 799999998832455899999999999999999987532 1 2368999999998753
Q ss_pred ccC--CCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 198 EKL--GEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 198 ~~l--~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
..+ +.||+|+++.... ..+++++.+.|+|||++++..
T Consensus 181 ~~~~~~~fD~V~~~~~~~------~~~l~~~~~~LkpgG~lv~~~ 219 (336)
T 2b25_A 181 EDIKSLTFDAVALDMLNP------HVTLPVFYPHLKHGGVCAVYV 219 (336)
T ss_dssp -------EEEEEECSSST------TTTHHHHGGGEEEEEEEEEEE
T ss_pred cccCCCCeeEEEECCCCH------HHHHHHHHHhcCCCcEEEEEe
Confidence 222 5799999976432 347899999999999999866
No 186
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.32 E-value=5.4e-12 Score=117.16 Aligned_cols=104 Identities=24% Similarity=0.306 Sum_probs=81.7
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++++||||||| +|+.++..|+ .+..+|+++|.|+ +++.|+++++..+ ++++|+++.+|+.+...+ ++||+|++
T Consensus 82 ~~~k~VLDvG~G-tGiLs~~Aa~--aGA~~V~ave~s~-~~~~a~~~~~~n~-~~~~i~~i~~~~~~~~lp-e~~Dvivs 155 (376)
T 4hc4_A 82 LRGKTVLDVGAG-TGILSIFCAQ--AGARRVYAVEASA-IWQQAREVVRFNG-LEDRVHVLPGPVETVELP-EQVDAIVS 155 (376)
T ss_dssp HTTCEEEEETCT-TSHHHHHHHH--TTCSEEEEEECST-THHHHHHHHHHTT-CTTTEEEEESCTTTCCCS-SCEEEEEC
T ss_pred cCCCEEEEeCCC-ccHHHHHHHH--hCCCEEEEEeChH-HHHHHHHHHHHcC-CCceEEEEeeeeeeecCC-ccccEEEe
Confidence 468899999999 9999988887 3446899999997 8899999988744 789999999999875333 78999997
Q ss_pred cCc--CCCCHHHHHHHHHHHHhccccCcEEEE
Q 039591 209 AAL--VGMSKEEKMKIIRHIRKYMKDGGILLV 238 (284)
Q Consensus 209 ~~~--~~~~~~~k~~~l~~~~~~L~pGG~lv~ 238 (284)
... ...+......++....++|+|||+++-
T Consensus 156 E~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 156 EWMGYGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp CCCBTTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred ecccccccccchhhhHHHHHHhhCCCCceECC
Confidence 421 111222346778888899999999873
No 187
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.32 E-value=6.8e-12 Score=109.49 Aligned_cols=109 Identities=15% Similarity=0.204 Sum_probs=83.7
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCc-EEEEEeCCHHHHHHHHHHHhhccC-------------------------
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKAT-HFDNFDIDEAANNVARRIVATDFE------------------------- 181 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~-~V~~vDis~~~~~~A~~~~~~~~~------------------------- 181 (284)
..++.+|||+||| .|..+..+++ .+. +|+++|+|+.+++.|++.....+.
T Consensus 54 ~~~~~~vLDlGcG-~G~~~~~l~~---~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (265)
T 2i62_A 54 AVKGELLIDIGSG-PTIYQLLSAC---ESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKE 129 (265)
T ss_dssp SCCEEEEEEESCT-TCCGGGTTGG---GTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHH
T ss_pred ccCCCEEEEECCC-ccHHHHHHhh---cccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHH
Confidence 3567899999999 7888888887 344 899999999999999998764210
Q ss_pred --CCCCe-EEEEcchhhhhc-cC---CCccEEEEcCcCC---CCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 182 --FEKRM-KFLTGDILQVKE-KL---GEYDCIFLAALVG---MSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 182 --l~~~v-~~~~~D~~~~~~-~l---~~fD~V~~~~~~~---~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+..++ +++.+|+.+... .. +.||+|++..... ...++...+++++.++|||||++++..
T Consensus 130 ~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 198 (265)
T 2i62_A 130 EKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVD 198 (265)
T ss_dssp HHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred HHhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEe
Confidence 00127 999999987432 22 6799999876442 123577899999999999999999876
No 188
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.31 E-value=1.7e-12 Score=111.72 Aligned_cols=104 Identities=16% Similarity=0.169 Sum_probs=82.2
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCC------CcEEEEEeCCHHHHHHHHHHHhhccCC----CCCeEEEEcchhhhh
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLK------ATHFDNFDIDEAANNVARRIVATDFEF----EKRMKFLTGDILQVK 197 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~------~~~V~~vDis~~~~~~A~~~~~~~~~l----~~~v~~~~~D~~~~~ 197 (284)
..++.+|||+||| .|..+..+++ ..+ ..+|+++|+++.+++.|++++...+ . ..+++++++|+.+..
T Consensus 82 ~~~~~~VLdiG~G-~G~~~~~la~-~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~~~~~v~~~~~d~~~~~ 158 (227)
T 1r18_A 82 LKPGARILDVGSG-SGYLTACFYR-YIKAKGVDADTRIVGIEHQAELVRRSKANLNTDD-RSMLDSGQLLIVEGDGRKGY 158 (227)
T ss_dssp CCTTCEEEEESCT-TSHHHHHHHH-HHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHH-HHHHHHTSEEEEESCGGGCC
T ss_pred CCCCCEEEEECCC-ccHHHHHHHH-hcccccCCccCEEEEEEcCHHHHHHHHHHHHhcC-ccccCCCceEEEECCcccCC
Confidence 3677899999999 7999988887 222 2599999999999999999987643 1 257999999998633
Q ss_pred ccCCCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEec
Q 039591 198 EKLGEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 198 ~~l~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
.+.+.||+|+++..... +.+++.+.|||||++++...
T Consensus 159 ~~~~~fD~I~~~~~~~~-------~~~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 159 PPNAPYNAIHVGAAAPD-------TPTELINQLASGGRLIVPVG 195 (227)
T ss_dssp GGGCSEEEEEECSCBSS-------CCHHHHHTEEEEEEEEEEES
T ss_pred CcCCCccEEEECCchHH-------HHHHHHHHhcCCCEEEEEEe
Confidence 33368999999876632 34788999999999998763
No 189
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.31 E-value=4.1e-12 Score=111.46 Aligned_cols=98 Identities=19% Similarity=0.253 Sum_probs=79.4
Q ss_pred CCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEEc
Q 039591 130 QPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFLA 209 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~~ 209 (284)
++.+||||||| .|..+..+++ .+.+|+++|+|+.+++.|++... .. ++++|+.+.....+.||+|++.
T Consensus 54 ~~~~vLDiGcG-~G~~~~~l~~---~~~~v~gvD~s~~~l~~a~~~~~------~~--~~~~d~~~~~~~~~~fD~v~~~ 121 (260)
T 2avn_A 54 NPCRVLDLGGG-TGKWSLFLQE---RGFEVVLVDPSKEMLEVAREKGV------KN--VVEAKAEDLPFPSGAFEAVLAL 121 (260)
T ss_dssp SCCEEEEETCT-TCHHHHHHHT---TTCEEEEEESCHHHHHHHHHHTC------SC--EEECCTTSCCSCTTCEEEEEEC
T ss_pred CCCeEEEeCCC-cCHHHHHHHH---cCCeEEEEeCCHHHHHHHHhhcC------CC--EEECcHHHCCCCCCCEEEEEEc
Confidence 77899999999 8999999987 47899999999999999998743 12 7889988754334789999987
Q ss_pred CcC-CCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 210 ALV-GMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 210 ~~~-~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
... +.. ++...+++++.+.|+|||++++..
T Consensus 122 ~~~~~~~-~~~~~~l~~~~~~LkpgG~l~~~~ 152 (260)
T 2avn_A 122 GDVLSYV-ENKDKAFSEIRRVLVPDGLLIATV 152 (260)
T ss_dssp SSHHHHC-SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhhcc-ccHHHHHHHHHHHcCCCeEEEEEe
Confidence 533 221 336889999999999999999865
No 190
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.31 E-value=4.5e-12 Score=108.04 Aligned_cols=108 Identities=14% Similarity=0.086 Sum_probs=78.9
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHH----HHhhccCCCCCeEEEEcchhhhhccCCCc
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARR----IVATDFEFEKRMKFLTGDILQVKEKLGEY 203 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~----~~~~~~~l~~~v~~~~~D~~~~~~~l~~f 203 (284)
..++.+|||+||| .|..+..+++ ..|+.+|+++|+|+.+++.+.+ .....+ + .+++|+++|+.+.....+.
T Consensus 25 ~~~~~~vLDiGcG-~G~~~~~la~-~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~-~-~~v~~~~~d~~~l~~~~~~- 99 (218)
T 3mq2_A 25 SQYDDVVLDVGTG-DGKHPYKVAR-QNPSRLVVALDADKSRMEKISAKAAAKPAKGG-L-PNLLYLWATAERLPPLSGV- 99 (218)
T ss_dssp TTSSEEEEEESCT-TCHHHHHHHH-HCTTEEEEEEESCGGGGHHHHHHHTSCGGGTC-C-TTEEEEECCSTTCCSCCCE-
T ss_pred ccCCCEEEEecCC-CCHHHHHHHH-HCCCCEEEEEECCHHHHHHHHHHHHHhhhhcC-C-CceEEEecchhhCCCCCCC-
Confidence 4678899999999 8999999998 5779999999999998885332 222222 2 4799999999875433244
Q ss_pred cEEEEcCcCCC----CHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 204 DCIFLAALVGM----SKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 204 D~V~~~~~~~~----~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|.|++...... ..++...+++++.+.|||||++++..
T Consensus 100 d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 100 GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEE
T ss_pred CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEe
Confidence 77774332100 01122789999999999999999854
No 191
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.31 E-value=1.6e-11 Score=113.84 Aligned_cols=104 Identities=14% Similarity=0.150 Sum_probs=83.9
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhh-hhccC-CCccEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQ-VKEKL-GEYDCI 206 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~-~~~~l-~~fD~V 206 (284)
.++++|||+| | .|..++.+++ ..++.+|+++|+|+.+++.|+++++..| ++ +++|+++|+.+ ..... +.||+|
T Consensus 171 ~~~~~VLDlG-G-~G~~~~~la~-~~~~~~v~~vDi~~~~l~~a~~~~~~~g-~~-~v~~~~~D~~~~l~~~~~~~fD~V 245 (373)
T 2qm3_A 171 LENKDIFVLG-D-DDLTSIALML-SGLPKRIAVLDIDERLTKFIEKAANEIG-YE-DIEIFTFDLRKPLPDYALHKFDTF 245 (373)
T ss_dssp STTCEEEEES-C-TTCHHHHHHH-HTCCSEEEEECSCHHHHHHHHHHHHHHT-CC-CEEEECCCTTSCCCTTTSSCBSEE
T ss_pred CCCCEEEEEC-C-CCHHHHHHHH-hCCCCEEEEEECCHHHHHHHHHHHHHcC-CC-CEEEEEChhhhhchhhccCCccEE
Confidence 4678999999 9 8999999987 4455799999999999999999998765 44 89999999987 32212 579999
Q ss_pred EEcCcCCCCHHHHHHHHHHHHhccccCcEE-EEE
Q 039591 207 FLAALVGMSKEEKMKIIRHIRKYMKDGGIL-LVR 239 (284)
Q Consensus 207 ~~~~~~~~~~~~k~~~l~~~~~~L~pGG~l-v~~ 239 (284)
+++.+.+.. ....+++++.+.|+|||++ ++.
T Consensus 246 i~~~p~~~~--~~~~~l~~~~~~LkpgG~~~~~~ 277 (373)
T 2qm3_A 246 ITDPPETLE--AIRAFVGRGIATLKGPRCAGYFG 277 (373)
T ss_dssp EECCCSSHH--HHHHHHHHHHHTBCSTTCEEEEE
T ss_pred EECCCCchH--HHHHHHHHHHHHcccCCeEEEEE
Confidence 999765422 2478999999999999944 443
No 192
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.30 E-value=4.2e-11 Score=111.92 Aligned_cols=106 Identities=18% Similarity=0.165 Sum_probs=84.3
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC-CCccEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL-GEYDCIF 207 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l-~~fD~V~ 207 (284)
.++++|||+||| +|..++.+|+ .|+.|+++|+|+.+++.|+++++..+ +. .++.++|+.+....+ +.||+|+
T Consensus 213 ~~g~~VLDlg~G-tG~~sl~~a~---~ga~V~avDis~~al~~a~~n~~~ng-~~--~~~~~~D~~~~l~~~~~~fD~Ii 285 (393)
T 4dmg_A 213 RPGERVLDVYSY-VGGFALRAAR---KGAYALAVDKDLEALGVLDQAALRLG-LR--VDIRHGEALPTLRGLEGPFHHVL 285 (393)
T ss_dssp CTTCEEEEESCT-TTHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHHHT-CC--CEEEESCHHHHHHTCCCCEEEEE
T ss_pred cCCCeEEEcccc-hhHHHHHHHH---cCCeEEEEECCHHHHHHHHHHHHHhC-CC--CcEEEccHHHHHHHhcCCCCEEE
Confidence 568999999999 8999999998 46679999999999999999988754 43 356799999865443 4599999
Q ss_pred EcCcCCC-C-------HHHHHHHHHHHHhccccCcEEEEEec
Q 039591 208 LAALVGM-S-------KEEKMKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 208 ~~~~~~~-~-------~~~k~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
++.+... . ...-.++++.+.+.|+|||+|++.+.
T Consensus 286 ~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~ 327 (393)
T 4dmg_A 286 LDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSC 327 (393)
T ss_dssp ECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred ECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 9876411 1 12346889999999999999997663
No 193
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.30 E-value=5e-12 Score=112.95 Aligned_cols=108 Identities=8% Similarity=0.165 Sum_probs=78.2
Q ss_pred CCCCeEEEecCCCChHHHHHH----HhhcCCCcEE--EEEeCCHHHHHHHHHHHhhccCCCCCe--EEEEcchhhhhc--
Q 039591 129 VQPKKVAFVGSGPMPLTSIVM----AKNHLKATHF--DNFDIDEAANNVARRIVATDFEFEKRM--KFLTGDILQVKE-- 198 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~l----a~~~~~~~~V--~~vDis~~~~~~A~~~~~~~~~l~~~v--~~~~~D~~~~~~-- 198 (284)
.++.+||||||| .|..+..+ +. ..++.+| +++|.|++|++.|++.++..+++ .++ .+..+++.+...
T Consensus 51 ~~~~~VLDiG~G-tG~~~~~~l~~l~~-~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~ 127 (292)
T 2aot_A 51 KSEIKILSIGGG-AGEIDLQILSKVQA-QYPGVCINNEVVEPSAEQIAKYKELVAKTSNL-ENVKFAWHKETSSEYQSRM 127 (292)
T ss_dssp CSEEEEEEETCT-TSHHHHHHHHHHHH-HSTTCEEEEEEECSCHHHHHHHHHHHHTCSSC-TTEEEEEECSCHHHHHHHH
T ss_pred CCCCeEEEEcCC-CCHHHHHHHHHHHh-hCCCceeeEEEEeCCHHHHHHHHHHHHhccCC-CcceEEEEecchhhhhhhh
Confidence 456799999999 77554432 22 2356655 99999999999999987653222 344 556777765431
Q ss_pred ----cCCCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 199 ----KLGEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 199 ----~l~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
..+.||+|++....++. ++...+++++.++|||||++++..
T Consensus 128 ~~~~~~~~fD~V~~~~~l~~~-~d~~~~l~~~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 128 LEKKELQKWDFIHMIQMLYYV-KDIPATLKFFHSLLGTNAKMLIIV 172 (292)
T ss_dssp HTTTCCCCEEEEEEESCGGGC-SCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccccCCCceeEEEEeeeeeec-CCHHHHHHHHHHHcCCCcEEEEEE
Confidence 23689999988766544 466889999999999999998754
No 194
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.30 E-value=8.7e-12 Score=113.68 Aligned_cols=104 Identities=21% Similarity=0.316 Sum_probs=83.3
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+||||||| .|..++.+++ .+..+|+++|+| .+++.|+++++..+ +.++++++.+|+.+...+.++||+|++
T Consensus 37 ~~~~~VLDiGcG-tG~ls~~la~--~g~~~v~~vD~s-~~~~~a~~~~~~~~-~~~~i~~~~~d~~~~~~~~~~~D~Ivs 111 (328)
T 1g6q_1 37 FKDKIVLDVGCG-TGILSMFAAK--HGAKHVIGVDMS-SIIEMAKELVELNG-FSDKITLLRGKLEDVHLPFPKVDIIIS 111 (328)
T ss_dssp HTTCEEEEETCT-TSHHHHHHHH--TCCSEEEEEESS-THHHHHHHHHHHTT-CTTTEEEEESCTTTSCCSSSCEEEEEE
T ss_pred cCCCEEEEecCc-cHHHHHHHHH--CCCCEEEEEChH-HHHHHHHHHHHHcC-CCCCEEEEECchhhccCCCCcccEEEE
Confidence 567899999999 8999999988 244599999999 59999999987744 667899999999875433368999998
Q ss_pred cCcC--CCCHHHHHHHHHHHHhccccCcEEE
Q 039591 209 AALV--GMSKEEKMKIIRHIRKYMKDGGILL 237 (284)
Q Consensus 209 ~~~~--~~~~~~k~~~l~~~~~~L~pGG~lv 237 (284)
.... .........++..+.+.|+|||+++
T Consensus 112 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 112 EWMGYFLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp CCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred eCchhhcccHHHHHHHHHHHHhhcCCCeEEE
Confidence 7432 1122345678999999999999997
No 195
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.30 E-value=1.5e-11 Score=110.92 Aligned_cols=110 Identities=14% Similarity=0.091 Sum_probs=85.6
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccC-----CCCCeEEEEcchhhhh----cc
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFE-----FEKRMKFLTGDILQVK----EK 199 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~-----l~~~v~~~~~D~~~~~----~~ 199 (284)
.++.+|||+||| .|..+..+++ .++.+|+++|+|+.+++.|++.....+. ...+++++++|+.+.. ..
T Consensus 33 ~~~~~VLDlGcG-~G~~~~~l~~--~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 109 (313)
T 3bgv_A 33 KRDITVLDLGCG-KGGDLLKWKK--GRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFR 109 (313)
T ss_dssp --CCEEEEETCT-TTTTHHHHHH--TTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCS
T ss_pred CCCCEEEEECCC-CcHHHHHHHh--cCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcc
Confidence 367899999999 7888888886 3678999999999999999998765320 1247999999998753 11
Q ss_pred --CCCccEEEEcCcCCC---CHHHHHHHHHHHHhccccCcEEEEEec
Q 039591 200 --LGEYDCIFLAALVGM---SKEEKMKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 200 --l~~fD~V~~~~~~~~---~~~~k~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
.+.||+|++....++ ..++...+++++.+.|+|||++++...
T Consensus 110 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 110 DPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp STTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred cCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 248999998765533 335667999999999999999998763
No 196
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.30 E-value=4.2e-12 Score=112.47 Aligned_cols=99 Identities=17% Similarity=0.137 Sum_probs=81.9
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhc--cCCCCCeEEEEcchhhhhccCCCccEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATD--FEFEKRMKFLTGDILQVKEKLGEYDCI 206 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~--~~l~~~v~~~~~D~~~~~~~l~~fD~V 206 (284)
..+++||+|||| .|..+..+++ + + .+|+++|+|+.+++.|++++... +.-..+++++.+|+.+.. ++||+|
T Consensus 71 ~~~~~VL~iG~G-~G~~~~~ll~-~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~I 143 (262)
T 2cmg_A 71 KELKEVLIVDGF-DLELAHQLFK-Y-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLI 143 (262)
T ss_dssp SCCCEEEEESSC-CHHHHHHHTT-S-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEE
T ss_pred CCCCEEEEEeCC-cCHHHHHHHh-C-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEE
Confidence 567899999999 9999999998 4 5 89999999999999999876432 101368999999998754 789999
Q ss_pred EEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 207 FLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 207 ~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+++... . ..+++.+.+.|+|||++++..
T Consensus 144 i~d~~d--p----~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 144 FCLQEP--D----IHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp EESSCC--C----HHHHHHHHTTEEEEEEEEEEE
T ss_pred EECCCC--h----HHHHHHHHHhcCCCcEEEEEc
Confidence 998532 1 348999999999999999865
No 197
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.30 E-value=9e-12 Score=111.20 Aligned_cols=112 Identities=16% Similarity=0.076 Sum_probs=89.1
Q ss_pred HHHHHHHhhccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhh
Q 039591 118 FECRILKENGVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVK 197 (284)
Q Consensus 118 ~E~~~l~~~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~ 197 (284)
.|...+... .+++++|||+||| +|..++.+|+ .++.+|+++|+||.+++.+++|++..+ +.++++++++|+.++.
T Consensus 114 ~er~ri~~~-~~~g~~VlD~~aG-~G~~~i~~a~--~g~~~V~avD~np~a~~~~~~N~~~N~-v~~~v~~~~~D~~~~~ 188 (278)
T 3k6r_A 114 KERVRMAKV-AKPDELVVDMFAG-IGHLSLPIAV--YGKAKVIAIEKDPYTFKFLVENIHLNK-VEDRMSAYNMDNRDFP 188 (278)
T ss_dssp HHHHHHHHH-CCTTCEEEETTCT-TTTTTHHHHH--HTCCEEEEECCCHHHHHHHHHHHHHTT-CTTTEEEECSCTTTCC
T ss_pred HHHHHHHHh-cCCCCEEEEecCc-CcHHHHHHHH--hcCCeEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEeCcHHHhc
Confidence 344434332 3688999999999 8989998887 355799999999999999999998744 7889999999998764
Q ss_pred ccCCCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 198 EKLGEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 198 ~~l~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
. .+.||.|+++.+... .++++.+.+.|+|||.|.+..
T Consensus 189 ~-~~~~D~Vi~~~p~~~-----~~~l~~a~~~lk~gG~ih~~~ 225 (278)
T 3k6r_A 189 G-ENIADRILMGYVVRT-----HEFIPKALSIAKDGAIIHYHN 225 (278)
T ss_dssp C-CSCEEEEEECCCSSG-----GGGHHHHHHHEEEEEEEEEEE
T ss_pred c-ccCCCEEEECCCCcH-----HHHHHHHHHHcCCCCEEEEEe
Confidence 3 368999998865421 467888889999999986643
No 198
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.29 E-value=7.7e-12 Score=119.81 Aligned_cols=104 Identities=20% Similarity=0.271 Sum_probs=84.5
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+||||||| .|..++.+++ .+..+|+++|+|+ +++.|+++++..+ +.++++++.+|+.+...+ ++||+|++
T Consensus 157 ~~~~~VLDiGcG-tG~la~~la~--~~~~~V~gvD~s~-~l~~A~~~~~~~g-l~~~v~~~~~d~~~~~~~-~~fD~Ivs 230 (480)
T 3b3j_A 157 FKDKIVLDVGCG-SGILSFFAAQ--AGARKIYAVEAST-MAQHAEVLVKSNN-LTDRIVVIPGKVEEVSLP-EQVDIIIS 230 (480)
T ss_dssp TTTCEEEEESCS-TTHHHHHHHH--TTCSEEEEEECHH-HHHHHHHHHHHTT-CTTTEEEEESCTTTCCCS-SCEEEEEC
T ss_pred cCCCEEEEecCc-ccHHHHHHHH--cCCCEEEEEEcHH-HHHHHHHHHHHcC-CCCcEEEEECchhhCccC-CCeEEEEE
Confidence 567899999999 8999998887 4667999999999 9999999988755 668899999999874222 68999998
Q ss_pred cCcC-CCCHHHHHHHHHHHHhccccCcEEEE
Q 039591 209 AALV-GMSKEEKMKIIRHIRKYMKDGGILLV 238 (284)
Q Consensus 209 ~~~~-~~~~~~k~~~l~~~~~~L~pGG~lv~ 238 (284)
+... ....++....+.++.+.|+|||++++
T Consensus 231 ~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 231 EPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp CCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred eCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 7542 22224556778889999999999985
No 199
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.29 E-value=2.7e-12 Score=113.20 Aligned_cols=110 Identities=16% Similarity=0.218 Sum_probs=80.7
Q ss_pred ccCCCCeEEEecCCCChHHHHHHHhhcCCCc-EEEEEeCCHHHHHHHHHHHhhccC-C----------------------
Q 039591 127 GVVQPKKVAFVGSGPMPLTSIVMAKNHLKAT-HFDNFDIDEAANNVARRIVATDFE-F---------------------- 182 (284)
Q Consensus 127 ~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~-~V~~vDis~~~~~~A~~~~~~~~~-l---------------------- 182 (284)
...++.+||||||| .|..++.+++ .+. +|+++|+|+.+++.|++.++...+ .
T Consensus 52 ~~~~g~~vLDiGCG-~G~~~~~~~~---~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~ 127 (263)
T 2a14_A 52 GGLQGDTLIDIGSG-PTIYQVLAAC---DSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEK 127 (263)
T ss_dssp TSCCEEEEEESSCT-TCCGGGTTGG---GTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHH
T ss_pred CCCCCceEEEeCCC-ccHHHHHHHH---hhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhH
Confidence 34677899999999 5776666655 444 799999999999999987654210 0
Q ss_pred ----CCCeE-EEEcchhhhh-c---cCCCccEEEEcCcCC---CCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 183 ----EKRMK-FLTGDILQVK-E---KLGEYDCIFLAALVG---MSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 183 ----~~~v~-~~~~D~~~~~-~---~l~~fD~V~~~~~~~---~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
..++. ++++|+.+.. . ..++||+|++....+ ...++...+++++.++|||||++++..
T Consensus 128 ~~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~ 197 (263)
T 2a14_A 128 EEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTV 197 (263)
T ss_dssp HHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred HHHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 01244 8899988631 1 136899999875432 224677889999999999999999986
No 200
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.28 E-value=2.1e-11 Score=113.62 Aligned_cols=108 Identities=14% Similarity=0.143 Sum_probs=86.0
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCC-CeEEEEcchhhhhccC----CCc
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEK-RMKFLTGDILQVKEKL----GEY 203 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~-~v~~~~~D~~~~~~~l----~~f 203 (284)
.++++|||+||| +|..++.+|+ ....+|+++|+|+.+++.|+++++..+ +.. +++|+++|+.+....+ ..|
T Consensus 211 ~~~~~VLDl~cG-tG~~sl~la~--~ga~~V~~vD~s~~al~~A~~N~~~n~-~~~~~v~~~~~D~~~~l~~~~~~~~~f 286 (385)
T 2b78_A 211 AAGKTVLNLFSY-TAAFSVAAAM--GGAMATTSVDLAKRSRALSLAHFEANH-LDMANHQLVVMDVFDYFKYARRHHLTY 286 (385)
T ss_dssp TBTCEEEEETCT-TTHHHHHHHH--TTBSEEEEEESCTTHHHHHHHHHHHTT-CCCTTEEEEESCHHHHHHHHHHTTCCE
T ss_pred cCCCeEEEEeec-cCHHHHHHHH--CCCCEEEEEECCHHHHHHHHHHHHHcC-CCccceEEEECCHHHHHHHHHHhCCCc
Confidence 567899999999 8999999997 233489999999999999999988744 544 8999999998754322 479
Q ss_pred cEEEEcCcCC-----CC---HHHHHHHHHHHHhccccCcEEEEEe
Q 039591 204 DCIFLAALVG-----MS---KEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 204 D~V~~~~~~~-----~~---~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|+|+++.+.. .. ...-.++++.+.+.|+|||++++..
T Consensus 287 D~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~ 331 (385)
T 2b78_A 287 DIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIAST 331 (385)
T ss_dssp EEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 9999987541 11 1233567888899999999999876
No 201
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.28 E-value=1.1e-11 Score=110.56 Aligned_cols=111 Identities=19% Similarity=0.223 Sum_probs=83.5
Q ss_pred CCCeEEEecCCCChH----HHHHHHhhcCC----CcEEEEEeCCHHHHHHHHHHHhhc----------------------
Q 039591 130 QPKKVAFVGSGPMPL----TSIVMAKNHLK----ATHFDNFDIDEAANNVARRIVATD---------------------- 179 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~----~ai~la~~~~~----~~~V~~vDis~~~~~~A~~~~~~~---------------------- 179 (284)
++.+|+++||| +|- .++.+++ ..+ +.+|+|+|+|+.+++.|++.+-..
T Consensus 105 ~~~rIld~GCg-TGee~ysiAi~L~e-~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~ 182 (274)
T 1af7_A 105 GEYRVWSAAAS-TGEEPYSIAITLAD-ALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPH 182 (274)
T ss_dssp SCEEEEESCCT-TTHHHHHHHHHHHH-HHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTS
T ss_pred CCcEEEEeecc-CChhHHHHHHHHHH-hcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCC
Confidence 45799999999 897 4555665 223 479999999999999999874100
Q ss_pred cC-------CCCCeEEEEcchhhhhcc-CCCccEEEEcCcC-CCCHHHHHHHHHHHHhccccCcEEEEEecc
Q 039591 180 FE-------FEKRMKFLTGDILQVKEK-LGEYDCIFLAALV-GMSKEEKMKIIRHIRKYMKDGGILLVRSAK 242 (284)
Q Consensus 180 ~~-------l~~~v~~~~~D~~~~~~~-l~~fD~V~~~~~~-~~~~~~k~~~l~~~~~~L~pGG~lv~~~~~ 242 (284)
++ +..+|+|.++|+.+.... .++||+|++.... ...++.+.++++++.+.|+|||.|++..+.
T Consensus 183 ~~~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg~sE 254 (274)
T 1af7_A 183 EGLVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAGHSE 254 (274)
T ss_dssp CSEEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEECTTC
T ss_pred CCceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEEecc
Confidence 00 113699999999873222 3689999997643 456677899999999999999999985543
No 202
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.27 E-value=3.1e-11 Score=112.69 Aligned_cols=108 Identities=23% Similarity=0.176 Sum_probs=87.5
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhcc----CCCcc
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEK----LGEYD 204 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~----l~~fD 204 (284)
.++++|||+||| .|..++.+++ .+..+|+++|+|+.+++.|+++++..+ +..+++|+++|+.+.... .+.||
T Consensus 216 ~~~~~VLDl~~G-~G~~~~~la~--~g~~~v~~vD~s~~~l~~a~~n~~~n~-~~~~v~~~~~d~~~~~~~~~~~~~~fD 291 (396)
T 2as0_A 216 QPGDRVLDVFTY-TGGFAIHAAI--AGADEVIGIDKSPRAIETAKENAKLNG-VEDRMKFIVGSAFEEMEKLQKKGEKFD 291 (396)
T ss_dssp CTTCEEEETTCT-TTHHHHHHHH--TTCSEEEEEESCHHHHHHHHHHHHHTT-CGGGEEEEESCHHHHHHHHHHTTCCEE
T ss_pred hCCCeEEEecCC-CCHHHHHHHH--CCCCEEEEEeCCHHHHHHHHHHHHHcC-CCccceEEECCHHHHHHHHHhhCCCCC
Confidence 478899999999 8999999998 234599999999999999999988744 545899999999876432 35899
Q ss_pred EEEEcCcCCC-CH-------HHHHHHHHHHHhccccCcEEEEEe
Q 039591 205 CIFLAALVGM-SK-------EEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 205 ~V~~~~~~~~-~~-------~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+|+++.+... .. ....+++..+.+.|+|||++++.+
T Consensus 292 ~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 335 (396)
T 2as0_A 292 IVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCS 335 (396)
T ss_dssp EEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 9999875421 11 345678999999999999998876
No 203
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.27 E-value=3.8e-11 Score=119.97 Aligned_cols=108 Identities=13% Similarity=0.174 Sum_probs=86.8
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcC-CCcEEEEEeCCHHHHHHHHHHHhhcc-----CCCCCeEEEEcchhhhhccCCC
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHL-KATHFDNFDIDEAANNVARRIVATDF-----EFEKRMKFLTGDILQVKEKLGE 202 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~-~~~~V~~vDis~~~~~~A~~~~~~~~-----~l~~~v~~~~~D~~~~~~~l~~ 202 (284)
.++.+||||||| .|..++.+++ .. +..+|+|+|+|+.+++.|+++++... ++ .+++|+++|+.+.....+.
T Consensus 720 ~~g~rVLDVGCG-TG~lai~LAr-~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl-~nVefiqGDa~dLp~~d~s 796 (950)
T 3htx_A 720 SSASTLVDFGCG-SGSLLDSLLD-YPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNV-KSATLYDGSILEFDSRLHD 796 (950)
T ss_dssp SCCSEEEEETCS-SSHHHHHHTS-SCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSC-SEEEEEESCTTSCCTTSCS
T ss_pred cCCCEEEEECCC-CCHHHHHHHH-hCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCC-CceEEEECchHhCCcccCC
Confidence 578999999999 8999999998 33 34799999999999999998654321 12 4799999999886655588
Q ss_pred ccEEEEcCcC-CCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 203 YDCIFLAALV-GMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 203 fD~V~~~~~~-~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
||+|++.... +...+....+++++.+.|||| .+++..
T Consensus 797 FDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIIST 834 (950)
T 3htx_A 797 VDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVST 834 (950)
T ss_dssp CCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEE
T ss_pred eeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEe
Confidence 9999997655 445455668999999999999 666655
No 204
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.26 E-value=2.3e-11 Score=111.85 Aligned_cols=110 Identities=18% Similarity=0.239 Sum_probs=84.5
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccC--CC----CCeEEEEcchhhhhcc---
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFE--FE----KRMKFLTGDILQVKEK--- 199 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~--l~----~~v~~~~~D~~~~~~~--- 199 (284)
..+++||+||+| .|.++..+++ + +..+|+++|+|+.+++.|++++..++. ++ .+++++.+|+.+....
T Consensus 187 p~pkrVL~IGgG-~G~~arellk-~-~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~ 263 (364)
T 2qfm_A 187 YTGKDVLILGGG-DGGILCEIVK-L-KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAK 263 (364)
T ss_dssp CTTCEEEEEECT-TCHHHHHHHT-T-CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHH
T ss_pred CCCCEEEEEECC-hhHHHHHHHH-C-CCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhc
Confidence 467899999999 8999998887 4 448999999999999999999764321 22 2799999999987653
Q ss_pred -CCCccEEEEcCcC---CCCHH--HHHHHHHHH----HhccccCcEEEEEec
Q 039591 200 -LGEYDCIFLAALV---GMSKE--EKMKIIRHI----RKYMKDGGILLVRSA 241 (284)
Q Consensus 200 -l~~fD~V~~~~~~---~~~~~--~k~~~l~~~----~~~L~pGG~lv~~~~ 241 (284)
-++||+||+++.. +..+. ...++++.+ .++|+|||++++.+.
T Consensus 264 ~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~ 315 (364)
T 2qfm_A 264 EGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 315 (364)
T ss_dssp HTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcC
Confidence 3689999999753 21111 225666666 899999999998873
No 205
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.25 E-value=3e-11 Score=120.71 Aligned_cols=108 Identities=12% Similarity=0.193 Sum_probs=87.4
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCC-CCeEEEEcchhhhhccC-CCccEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFE-KRMKFLTGDILQVKEKL-GEYDCI 206 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~-~~v~~~~~D~~~~~~~l-~~fD~V 206 (284)
.++++|||+||| +|..++.+++ ....+|+++|+|+.+++.|+++++..+ ++ ++++++++|+.+..... ++||+|
T Consensus 538 ~~g~~VLDlg~G-tG~~sl~aa~--~ga~~V~aVD~s~~al~~a~~N~~~ng-l~~~~v~~i~~D~~~~l~~~~~~fD~I 613 (703)
T 3v97_A 538 SKGKDFLNLFSY-TGSATVHAGL--GGARSTTTVDMSRTYLEWAERNLRLNG-LTGRAHRLIQADCLAWLREANEQFDLI 613 (703)
T ss_dssp CTTCEEEEESCT-TCHHHHHHHH--TTCSEEEEEESCHHHHHHHHHHHHHTT-CCSTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred cCCCcEEEeeec-hhHHHHHHHH--CCCCEEEEEeCCHHHHHHHHHHHHHcC-CCccceEEEecCHHHHHHhcCCCccEE
Confidence 468899999999 8888888887 234569999999999999999988744 54 58999999999854433 689999
Q ss_pred EEcCcCC----------CCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 207 FLAALVG----------MSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 207 ~~~~~~~----------~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+++.+.. ....+..++++.+.+.|+|||+|++..
T Consensus 614 i~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~ 657 (703)
T 3v97_A 614 FIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSN 657 (703)
T ss_dssp EECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 9987541 112345788999999999999999766
No 206
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.25 E-value=2e-11 Score=111.66 Aligned_cols=98 Identities=16% Similarity=0.184 Sum_probs=83.9
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+|||+||| +|..++. ++ ++.+|+++|+|+.+++.|+++++..+ +..+++++++|+.+.. +.||+|++
T Consensus 194 ~~~~~VLDlg~G-~G~~~l~-a~---~~~~V~~vD~s~~ai~~a~~n~~~n~-l~~~v~~~~~D~~~~~---~~fD~Vi~ 264 (336)
T 2yx1_A 194 SLNDVVVDMFAG-VGPFSIA-CK---NAKKIYAIDINPHAIELLKKNIKLNK-LEHKIIPILSDVREVD---VKGNRVIM 264 (336)
T ss_dssp CTTCEEEETTCT-TSHHHHH-TT---TSSEEEEEESCHHHHHHHHHHHHHTT-CTTTEEEEESCGGGCC---CCEEEEEE
T ss_pred CCCCEEEEccCc-cCHHHHh-cc---CCCEEEEEECCHHHHHHHHHHHHHcC-CCCcEEEEECChHHhc---CCCcEEEE
Confidence 578899999999 8999988 76 57899999999999999999988744 5568999999998754 78999999
Q ss_pred cCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 209 AALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+.+... .++++.+.+.|+|||.+++.+
T Consensus 265 dpP~~~-----~~~l~~~~~~L~~gG~l~~~~ 291 (336)
T 2yx1_A 265 NLPKFA-----HKFIDKALDIVEEGGVIHYYT 291 (336)
T ss_dssp CCTTTG-----GGGHHHHHHHEEEEEEEEEEE
T ss_pred CCcHhH-----HHHHHHHHHHcCCCCEEEEEE
Confidence 865321 378999999999999998865
No 207
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.24 E-value=3.5e-11 Score=114.37 Aligned_cols=110 Identities=15% Similarity=0.111 Sum_probs=85.0
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhcc-CCCccEE
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEK-LGEYDCI 206 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~-l~~fD~V 206 (284)
..++.+|||+||||.| .++.+|+....+++|+++|+|+.+++.+++++++.| + .++.++++|+.+.... .+.||+|
T Consensus 103 ~~~g~~VLDlcaGpGg-kt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g-~-~nv~v~~~Da~~l~~~~~~~FD~I 179 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGG-KSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWG-V-SNAIVTNHAPAELVPHFSGFFDRI 179 (456)
T ss_dssp CCTTCEEEESSCTTCH-HHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHT-C-SSEEEECCCHHHHHHHHTTCEEEE
T ss_pred CCCCCEEEEECCCcCH-HHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcC-C-CceEEEeCCHHHhhhhccccCCEE
Confidence 4788999999999655 555666523345799999999999999999999876 4 4799999999876432 2689999
Q ss_pred EEcCcC---CC---CHH---------------HHHHHHHHHHhccccCcEEEEEe
Q 039591 207 FLAALV---GM---SKE---------------EKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 207 ~~~~~~---~~---~~~---------------~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+++++. |. .++ ...++++++.+.|||||+|++.+
T Consensus 180 l~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsT 234 (456)
T 3m4x_A 180 VVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYST 234 (456)
T ss_dssp EEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 998753 11 111 12388999999999999999865
No 208
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.24 E-value=9.7e-12 Score=110.73 Aligned_cols=109 Identities=17% Similarity=0.142 Sum_probs=78.8
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhcc----------------CCC---------
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDF----------------EFE--------- 183 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~----------------~l~--------- 183 (284)
.++.+||||||| .|..++.+++ .++.+|+++|+|+.|++.|++.++..+ +..
T Consensus 70 ~~~~~vLDiGcG-~G~~~~l~~~--~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 146 (289)
T 2g72_A 70 VSGRTLIDIGSG-PTVYQLLSAC--SHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQ 146 (289)
T ss_dssp SCCSEEEEETCT-TCCGGGTTGG--GGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHH
T ss_pred CCCCeEEEECCC-cChHHHHhhc--cCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHH
Confidence 467899999999 6776555544 356799999999999999998654311 000
Q ss_pred ---CCeEEEEcchhh-hhcc---C--CCccEEEEcCcCCC---CHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 184 ---KRMKFLTGDILQ-VKEK---L--GEYDCIFLAALVGM---SKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 184 ---~~v~~~~~D~~~-~~~~---l--~~fD~V~~~~~~~~---~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
..++++.+|+.+ .+.+ + +.||+|++.....+ ..++...+++++.++|||||+|++..
T Consensus 147 ~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 147 LRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp HHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred HHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 025677789876 2211 1 45999998865422 13578899999999999999999864
No 209
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.24 E-value=4e-11 Score=106.86 Aligned_cols=107 Identities=20% Similarity=0.216 Sum_probs=78.2
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeC-CHHHHHHHHHHH-----hhccCCC----CCeEEEEcchhh---
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDI-DEAANNVARRIV-----ATDFEFE----KRMKFLTGDILQ--- 195 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDi-s~~~~~~A~~~~-----~~~~~l~----~~v~~~~~D~~~--- 195 (284)
.++.+|||+||| .|..++.+++ ....+|+++|+ |+.+++.|++++ +..+ +. .++++...|..+
T Consensus 78 ~~~~~vLDlG~G-~G~~~~~~a~--~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~-~~~~~~~~v~~~~~~~~~~~~ 153 (281)
T 3bzb_A 78 IAGKTVCELGAG-AGLVSIVAFL--AGADQVVATDYPDPEILNSLESNIREHTANSCS-SETVKRASPKVVPYRWGDSPD 153 (281)
T ss_dssp TTTCEEEETTCT-TSHHHHHHHH--TTCSEEEEEECSCHHHHHHHHHHHHTTCC-----------CCCEEEECCTTSCTH
T ss_pred cCCCeEEEeccc-ccHHHHHHHH--cCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcc-cccCCCCCeEEEEecCCCccH
Confidence 577899999999 8999999988 23349999999 899999999998 4422 32 478888655433
Q ss_pred -hhc--cCCCccEEEEcCcCCCCHHHHHHHHHHHHhccc---c--CcEEEEEe
Q 039591 196 -VKE--KLGEYDCIFLAALVGMSKEEKMKIIRHIRKYMK---D--GGILLVRS 240 (284)
Q Consensus 196 -~~~--~l~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~---p--GG~lv~~~ 240 (284)
... ..++||+|++..... ..++...+++.+.+.|+ | ||++++..
T Consensus 154 ~~~~~~~~~~fD~Ii~~dvl~-~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~ 205 (281)
T 3bzb_A 154 SLQRCTGLQRFQVVLLADLLS-FHQAHDALLRSVKMLLALPANDPTAVALVTF 205 (281)
T ss_dssp HHHHHHSCSSBSEEEEESCCS-CGGGHHHHHHHHHHHBCCTTTCTTCEEEEEE
T ss_pred HHHhhccCCCCCEEEEeCccc-ChHHHHHHHHHHHHHhcccCCCCCCEEEEEE
Confidence 111 136899999754332 24567889999999999 9 99876643
No 210
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.23 E-value=3.8e-10 Score=95.07 Aligned_cols=101 Identities=16% Similarity=0.168 Sum_probs=79.7
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEE
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIF 207 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~ 207 (284)
..++.+|||+||| .|..++.+++ .+..+|+++|+|+.+++.|+++++..+ + +++++++|+.+.. +.||+|+
T Consensus 47 ~~~~~~vlD~g~G-~G~~~~~l~~--~~~~~v~~vD~~~~~~~~a~~~~~~~~-~--~~~~~~~d~~~~~---~~~D~v~ 117 (207)
T 1wy7_A 47 DIEGKVVADLGAG-TGVLSYGALL--LGAKEVICVEVDKEAVDVLIENLGEFK-G--KFKVFIGDVSEFN---SRVDIVI 117 (207)
T ss_dssp SSTTCEEEEETCT-TCHHHHHHHH--TTCSEEEEEESCHHHHHHHHHHTGGGT-T--SEEEEESCGGGCC---CCCSEEE
T ss_pred CCCcCEEEEeeCC-CCHHHHHHHH--cCCCEEEEEECCHHHHHHHHHHHHHcC-C--CEEEEECchHHcC---CCCCEEE
Confidence 4578899999999 8989999988 234589999999999999999987754 3 7999999998742 4899999
Q ss_pred EcCcCCCCH-HHHHHHHHHHHhccccCcEEEEE
Q 039591 208 LAALVGMSK-EEKMKIIRHIRKYMKDGGILLVR 239 (284)
Q Consensus 208 ~~~~~~~~~-~~k~~~l~~~~~~L~pGG~lv~~ 239 (284)
++.+.+... .....+++.+.+.+ |+.++..
T Consensus 118 ~~~p~~~~~~~~~~~~l~~~~~~l--~~~~~~~ 148 (207)
T 1wy7_A 118 MNPPFGSQRKHADRPFLLKAFEIS--DVVYSIH 148 (207)
T ss_dssp ECCCCSSSSTTTTHHHHHHHHHHC--SEEEEEE
T ss_pred EcCCCccccCCchHHHHHHHHHhc--CcEEEEE
Confidence 998654321 23357888888888 6666655
No 211
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.23 E-value=3.2e-11 Score=114.87 Aligned_cols=109 Identities=13% Similarity=0.063 Sum_probs=84.5
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhc-cCCCccEE
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKE-KLGEYDCI 206 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~-~l~~fD~V 206 (284)
..++.+|||+|||| |..++.+|+.....++|+++|+|+.+++.+++++++.| + . ++++++|+.+... ..+.||+|
T Consensus 99 ~~~g~~VLDlgaGp-G~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G-~-~-v~~~~~Da~~l~~~~~~~FD~I 174 (464)
T 3m6w_A 99 PKPGERVLDLAAAP-GGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWG-A-P-LAVTQAPPRALAEAFGTYFHRV 174 (464)
T ss_dssp CCTTCEEEESSCTT-CHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHC-C-C-CEEECSCHHHHHHHHCSCEEEE
T ss_pred cCCCCEEEEEcCCc-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-C-e-EEEEECCHHHhhhhccccCCEE
Confidence 47889999999995 55566666623334799999999999999999999876 4 3 9999999987642 23689999
Q ss_pred EEcCcC---CCC------------------HHHHHHHHHHHHhccccCcEEEEEe
Q 039591 207 FLAALV---GMS------------------KEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 207 ~~~~~~---~~~------------------~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+++++. |.. .....++++++.+.|||||+|++.+
T Consensus 175 l~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysT 229 (464)
T 3m6w_A 175 LLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYST 229 (464)
T ss_dssp EEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred EECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 987653 110 0123789999999999999999865
No 212
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.23 E-value=3.8e-11 Score=111.77 Aligned_cols=99 Identities=17% Similarity=0.232 Sum_probs=76.8
Q ss_pred CCCCeEEEecCC-----CChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhcc----
Q 039591 129 VQPKKVAFVGSG-----PMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEK---- 199 (284)
Q Consensus 129 ~~~~~VL~iGsG-----p~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~---- 199 (284)
.++.+||||||| .+|..++.+++...++++|+++|+|+.+. .. ..+++|+++|+.+....
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~-------~~----~~rI~fv~GDa~dlpf~~~l~ 283 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH-------VD----ELRIRTIQGDQNDAEFLDRIA 283 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG-------GC----BTTEEEEECCTTCHHHHHHHH
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh-------hc----CCCcEEEEecccccchhhhhh
Confidence 567899999999 12334555555356889999999999972 11 26899999999875332
Q ss_pred --CCCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 200 --LGEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 200 --l~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.+.||+|++++. +...+....|+++.++|||||++++.+
T Consensus 284 ~~d~sFDlVisdgs--H~~~d~~~aL~el~rvLKPGGvlVi~D 324 (419)
T 3sso_A 284 RRYGPFDIVIDDGS--HINAHVRTSFAALFPHVRPGGLYVIED 324 (419)
T ss_dssp HHHCCEEEEEECSC--CCHHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred cccCCccEEEECCc--ccchhHHHHHHHHHHhcCCCeEEEEEe
Confidence 378999998764 234678899999999999999999976
No 213
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.23 E-value=5.4e-11 Score=111.08 Aligned_cols=108 Identities=19% Similarity=0.175 Sum_probs=87.2
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCC-CCCeEEEEcchhhhhcc----CCCc
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEF-EKRMKFLTGDILQVKEK----LGEY 203 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l-~~~v~~~~~D~~~~~~~----l~~f 203 (284)
.++++|||+||| .|..++.+++ ....+|+++|+|+.+++.|+++++..+ + .++++|+++|+.+.... -+.|
T Consensus 219 ~~~~~VLDl~cG-~G~~sl~la~--~g~~~V~~vD~s~~al~~a~~n~~~ng-l~~~~v~~~~~D~~~~~~~~~~~~~~f 294 (396)
T 3c0k_A 219 VENKRVLNCFSY-TGGFAVSALM--GGCSQVVSVDTSQEALDIARQNVELNK-LDLSKAEFVRDDVFKLLRTYRDRGEKF 294 (396)
T ss_dssp CTTCEEEEESCT-TCSHHHHHHH--TTCSEEEEEESCHHHHHHHHHHHHHTT-CCGGGEEEEESCHHHHHHHHHHTTCCE
T ss_pred hCCCeEEEeecc-CCHHHHHHHH--CCCCEEEEEECCHHHHHHHHHHHHHcC-CCccceEEEECCHHHHHHHHHhcCCCC
Confidence 578899999999 8888999988 234689999999999999999988744 5 44899999999886442 2589
Q ss_pred cEEEEcCcCCC--------CHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 204 DCIFLAALVGM--------SKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 204 D~V~~~~~~~~--------~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|+|+++.+... ......+++..+.+.|+|||++++.+
T Consensus 295 D~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 339 (396)
T 3c0k_A 295 DVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFS 339 (396)
T ss_dssp EEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 99999875411 11345788999999999999999876
No 214
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.22 E-value=4.5e-11 Score=109.54 Aligned_cols=103 Identities=20% Similarity=0.204 Sum_probs=80.7
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+||||||| .|..+..+++ ..++.+++++|+ +.++. ++..+..+ +..+++|+.+|+.+. . ..||+|++
T Consensus 183 ~~~~~vLDvG~G-~G~~~~~l~~-~~p~~~~~~~D~-~~~~~--~~~~~~~~-~~~~v~~~~~d~~~~-~--p~~D~v~~ 253 (348)
T 3lst_A 183 PATGTVADVGGG-RGGFLLTVLR-EHPGLQGVLLDR-AEVVA--RHRLDAPD-VAGRWKVVEGDFLRE-V--PHADVHVL 253 (348)
T ss_dssp CSSEEEEEETCT-TSHHHHHHHH-HCTTEEEEEEEC-HHHHT--TCCCCCGG-GTTSEEEEECCTTTC-C--CCCSEEEE
T ss_pred cCCceEEEECCc-cCHHHHHHHH-HCCCCEEEEecC-HHHhh--cccccccC-CCCCeEEEecCCCCC-C--CCCcEEEE
Confidence 667899999999 8999999988 578899999999 55554 33333323 457899999999732 2 28999998
Q ss_pred cCcCC-CCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 209 AALVG-MSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~~-~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
....+ +..++..++++++.+.|||||+|++..
T Consensus 254 ~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e 286 (348)
T 3lst_A 254 KRILHNWGDEDSVRILTNCRRVMPAHGRVLVID 286 (348)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEE
T ss_pred ehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 87654 444555899999999999999998865
No 215
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=99.22 E-value=5e-11 Score=106.85 Aligned_cols=110 Identities=15% Similarity=0.238 Sum_probs=88.8
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccC---CCCCeEEEEcchhhhhccC-CCcc
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFE---FEKRMKFLTGDILQVKEKL-GEYD 204 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~---l~~~v~~~~~D~~~~~~~l-~~fD 204 (284)
..+++||.||.| .|.++..+.+ +.+..+|+.+|+|++.++.|++.+..+.. -+.|++++.+|+.+..... ++||
T Consensus 82 p~pk~VLIiGgG-dG~~~revlk-~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yD 159 (294)
T 3o4f_A 82 GHAKHVLIIGGG-DGAMLREVTR-HKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFD 159 (294)
T ss_dssp SCCCEEEEESCT-TSHHHHHHHT-CTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEE
T ss_pred CCCCeEEEECCC-chHHHHHHHH-cCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCC
Confidence 678999999999 8999999988 55667999999999999999998753211 1478999999999876544 7899
Q ss_pred EEEEcCcCCCCHH---HHHHHHHHHHhccccCcEEEEEe
Q 039591 205 CIFLAALVGMSKE---EKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 205 ~V~~~~~~~~~~~---~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+|+++..-...+. -..++++.+.+.|+|||+++..+
T Consensus 160 vIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 160 VIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEec
Confidence 9999865321111 12689999999999999999876
No 216
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.21 E-value=4.3e-11 Score=101.80 Aligned_cols=98 Identities=16% Similarity=0.308 Sum_probs=78.7
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhcc--CCCccEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEK--LGEYDCI 206 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~--l~~fD~V 206 (284)
.++.+|||+||| .|..+..+++ . +.+++++|+|+.+++.|+++. .+++++|+.+.... .+.||+|
T Consensus 31 ~~~~~vLdiG~G-~G~~~~~l~~-~--~~~~~~~D~~~~~~~~~~~~~---------~~~~~~d~~~~~~~~~~~~fD~v 97 (230)
T 3cc8_A 31 KEWKEVLDIGCS-SGALGAAIKE-N--GTRVSGIEAFPEAAEQAKEKL---------DHVVLGDIETMDMPYEEEQFDCV 97 (230)
T ss_dssp TTCSEEEEETCT-TSHHHHHHHT-T--TCEEEEEESSHHHHHHHHTTS---------SEEEESCTTTCCCCSCTTCEEEE
T ss_pred cCCCcEEEeCCC-CCHHHHHHHh-c--CCeEEEEeCCHHHHHHHHHhC---------CcEEEcchhhcCCCCCCCccCEE
Confidence 578899999999 8999999988 2 589999999999999988652 26788998753222 2689999
Q ss_pred EEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 207 FLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 207 ~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
++.....+. .+...+++++.+.|+|||.+++..
T Consensus 98 ~~~~~l~~~-~~~~~~l~~~~~~L~~gG~l~~~~ 130 (230)
T 3cc8_A 98 IFGDVLEHL-FDPWAVIEKVKPYIKQNGVILASI 130 (230)
T ss_dssp EEESCGGGS-SCHHHHHHHTGGGEEEEEEEEEEE
T ss_pred EECChhhhc-CCHHHHHHHHHHHcCCCCEEEEEe
Confidence 987654332 344789999999999999999865
No 217
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.21 E-value=1e-10 Score=108.45 Aligned_cols=108 Identities=14% Similarity=0.083 Sum_probs=83.0
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEE
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIF 207 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~ 207 (284)
..++.+|||+||| .|..++.+++ ..+.++|+|+|+|+.+++.|+++++..| +.++++|.++|+.+.....+.||+|+
T Consensus 215 ~~~~~~vLD~gCG-sG~~~i~~a~-~~~~~~v~g~Dis~~~l~~A~~n~~~~g-l~~~i~~~~~D~~~~~~~~~~fD~Ii 291 (373)
T 3tm4_A 215 ELDGGSVLDPMCG-SGTILIELAL-RRYSGEIIGIEKYRKHLIGAEMNALAAG-VLDKIKFIQGDATQLSQYVDSVDFAI 291 (373)
T ss_dssp TCCSCCEEETTCT-TCHHHHHHHH-TTCCSCEEEEESCHHHHHHHHHHHHHTT-CGGGCEEEECCGGGGGGTCSCEEEEE
T ss_pred cCCCCEEEEccCc-CcHHHHHHHH-hCCCCeEEEEeCCHHHHHHHHHHHHHcC-CCCceEEEECChhhCCcccCCcCEEE
Confidence 4678899999999 8999999998 3444589999999999999999998755 55789999999998765447899999
Q ss_pred EcCcCCCCH------HH-HHHHHHHHHhccccCcEEEEE
Q 039591 208 LAALVGMSK------EE-KMKIIRHIRKYMKDGGILLVR 239 (284)
Q Consensus 208 ~~~~~~~~~------~~-k~~~l~~~~~~L~pGG~lv~~ 239 (284)
++.+.+... ++ -.++++.+.+.| +|+.+++.
T Consensus 292 ~npPyg~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~~i~ 329 (373)
T 3tm4_A 292 SNLPYGLKIGKKSMIPDLYMKFFNELAKVL-EKRGVFIT 329 (373)
T ss_dssp EECCCC------CCHHHHHHHHHHHHHHHE-EEEEEEEE
T ss_pred ECCCCCcccCcchhHHHHHHHHHHHHHHHc-CCeEEEEE
Confidence 987754321 11 267788888888 44444443
No 218
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.21 E-value=5.3e-11 Score=110.66 Aligned_cols=105 Identities=15% Similarity=0.101 Sum_probs=86.1
Q ss_pred CCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhcc----CCCccE
Q 039591 130 QPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEK----LGEYDC 205 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~----l~~fD~ 205 (284)
++++|||+||| .|..++.+++ . +.+|+++|+|+.+++.|+++++..+ + .+++|+++|+.+.... -+.||+
T Consensus 209 ~~~~VLDlg~G-~G~~~~~la~-~--~~~v~~vD~s~~~~~~a~~n~~~n~-~-~~~~~~~~d~~~~~~~~~~~~~~fD~ 282 (382)
T 1wxx_A 209 RGERALDVFSY-AGGFALHLAL-G--FREVVAVDSSAEALRRAEENARLNG-L-GNVRVLEANAFDLLRRLEKEGERFDL 282 (382)
T ss_dssp CEEEEEEETCT-TTHHHHHHHH-H--EEEEEEEESCHHHHHHHHHHHHHTT-C-TTEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeeec-cCHHHHHHHH-h--CCEEEEEECCHHHHHHHHHHHHHcC-C-CCceEEECCHHHHHHHHHhcCCCeeE
Confidence 67899999999 8999999998 2 6789999999999999999988744 4 3499999999876543 258999
Q ss_pred EEEcCcC-CCC-------HHHHHHHHHHHHhccccCcEEEEEe
Q 039591 206 IFLAALV-GMS-------KEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 206 V~~~~~~-~~~-------~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|+++.+. +.. .....+++..+.+.|+|||++++.+
T Consensus 283 Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 325 (382)
T 1wxx_A 283 VVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATAS 325 (382)
T ss_dssp EEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 9998754 111 1344678999999999999999876
No 219
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.21 E-value=5.4e-11 Score=111.00 Aligned_cols=104 Identities=18% Similarity=0.149 Sum_probs=86.1
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCC-cEEEEEeCCHHHHHHHHHHHhhccCCCCC-eEEEEcchhhhhc-cC-CCcc
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKA-THFDNFDIDEAANNVARRIVATDFEFEKR-MKFLTGDILQVKE-KL-GEYD 204 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~-~~V~~vDis~~~~~~A~~~~~~~~~l~~~-v~~~~~D~~~~~~-~l-~~fD 204 (284)
.++.+|||++|| +|..++.+|+ ..+| .+|+++|+|+.+++.+++|++..+ +.++ ++++++|+.+... .. +.||
T Consensus 51 ~~g~~VLDlfaG-tG~~sl~aa~-~~~ga~~V~avDi~~~av~~~~~N~~~Ng-l~~~~v~v~~~Da~~~l~~~~~~~fD 127 (392)
T 3axs_A 51 GRPVKVADPLSA-SGIRAIRFLL-ETSCVEKAYANDISSKAIEIMKENFKLNN-IPEDRYEIHGMEANFFLRKEWGFGFD 127 (392)
T ss_dssp CSCEEEEESSCT-TSHHHHHHHH-HCSCEEEEEEECSCHHHHHHHHHHHHHTT-CCGGGEEEECSCHHHHHHSCCSSCEE
T ss_pred CCCCEEEECCCc-ccHHHHHHHH-hCCCCCEEEEEECCHHHHHHHHHHHHHhC-CCCceEEEEeCCHHHHHHHhhCCCCc
Confidence 467899999999 8888988887 3445 689999999999999999998754 6556 9999999988765 44 5799
Q ss_pred EEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 205 CIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 205 ~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+|+++. .+.. ..+++.+.+.|+|||+|++..
T Consensus 128 ~V~lDP-~g~~----~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 128 YVDLDP-FGTP----VPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp EEEECC-SSCC----HHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECC-CcCH----HHHHHHHHHHhCCCCEEEEEe
Confidence 999998 3333 468999999999999888765
No 220
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.20 E-value=7.8e-11 Score=112.79 Aligned_cols=108 Identities=15% Similarity=0.157 Sum_probs=83.7
Q ss_pred CCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhc-cCCCccEEEE
Q 039591 130 QPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKE-KLGEYDCIFL 208 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~-~l~~fD~V~~ 208 (284)
++.+|||+|||| |..++.+|+...++++|+++|+|+.+++.+++++++.| + .+++++++|+.+... ..+.||+|++
T Consensus 117 ~g~~VLDl~aGp-G~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g-~-~nv~~~~~D~~~~~~~~~~~fD~Il~ 193 (479)
T 2frx_A 117 APQRVMDVAAAP-GSKTTQISARMNNEGAILANEFSASRVKVLHANISRCG-I-SNVALTHFDGRVFGAAVPEMFDAILL 193 (479)
T ss_dssp CCSEEEESSCTT-SHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHT-C-CSEEEECCCSTTHHHHSTTCEEEEEE
T ss_pred CCCEEEEeCCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC-C-CcEEEEeCCHHHhhhhccccCCEEEE
Confidence 789999999995 55566666623345899999999999999999998866 3 479999999987543 2268999999
Q ss_pred cCcC---CC-----------CH-------HHHHHHHHHHHhccccCcEEEEEe
Q 039591 209 AALV---GM-----------SK-------EEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~---~~-----------~~-------~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+++. |. .. ....++++++.+.|||||+|++.+
T Consensus 194 D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysT 246 (479)
T 2frx_A 194 DAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYST 246 (479)
T ss_dssp ECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 7543 11 11 113578999999999999999865
No 221
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.20 E-value=1.1e-10 Score=103.79 Aligned_cols=108 Identities=17% Similarity=0.261 Sum_probs=78.6
Q ss_pred CCCeEEEecCCCC--hHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhc----c--CC
Q 039591 130 QPKKVAFVGSGPM--PLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKE----K--LG 201 (284)
Q Consensus 130 ~~~~VL~iGsGp~--G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~----~--l~ 201 (284)
..++||||||| + +-....++++..|+++|+++|.||.|++.||+++...+ ..+++|+++|+.+... . -+
T Consensus 78 g~~q~LDLGcG-~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~--~~~~~~v~aD~~~~~~~l~~~~~~~ 154 (277)
T 3giw_A 78 GIRQFLDIGTG-IPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTP--EGRTAYVEADMLDPASILDAPELRD 154 (277)
T ss_dssp CCCEEEEESCC-SCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCS--SSEEEEEECCTTCHHHHHTCHHHHT
T ss_pred CCCEEEEeCCC-CCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCC--CCcEEEEEecccChhhhhccccccc
Confidence 45799999999 5 22234444435789999999999999999999876532 2579999999987421 0 13
Q ss_pred Ccc-----EEEEcCcCCC-CHHH-HHHHHHHHHhccccCcEEEEEe
Q 039591 202 EYD-----CIFLAALVGM-SKEE-KMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 202 ~fD-----~V~~~~~~~~-~~~~-k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.|| .|++++..++ ..++ ...+++++.+.|+|||+|++..
T Consensus 155 ~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~ 200 (277)
T 3giw_A 155 TLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSI 200 (277)
T ss_dssp TCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEE
T ss_pred ccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEe
Confidence 344 4666665543 3333 4789999999999999999875
No 222
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.20 E-value=8.4e-11 Score=109.34 Aligned_cols=103 Identities=22% Similarity=0.170 Sum_probs=85.0
Q ss_pred CCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhcc--------------CCCCCeEEEEcchhh
Q 039591 130 QPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDF--------------EFEKRMKFLTGDILQ 195 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~--------------~l~~~v~~~~~D~~~ 195 (284)
++.+|||+||| .|..++.+++ ..++.+|+++|+|+.+++.+++|++..+ ++. +++++++|+.+
T Consensus 47 ~~~~VLDl~aG-tG~~~l~~a~-~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~-~i~v~~~Da~~ 123 (378)
T 2dul_A 47 NPKIVLDALSA-TGIRGIRFAL-ETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEK-TIVINHDDANR 123 (378)
T ss_dssp CCSEEEESSCT-TSHHHHHHHH-HSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSS-EEEEEESCHHH
T ss_pred CCCEEEECCCc-hhHHHHHHHH-hCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCC-ceEEEcCcHHH
Confidence 67899999999 8999999998 4566789999999999999999998751 243 39999999988
Q ss_pred hhccC-CCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 196 VKEKL-GEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 196 ~~~~l-~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
..... +.||+|+++... .. ..+++.+.+.++|||++++..
T Consensus 124 ~~~~~~~~fD~I~lDP~~-~~----~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 124 LMAERHRYFHFIDLDPFG-SP----MEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHHHSTTCEEEEEECCSS-CC----HHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHhccCCCCEEEeCCCC-CH----HHHHHHHHHhcCCCCEEEEEe
Confidence 65443 579999998743 22 578999999999999888764
No 223
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.19 E-value=5.2e-11 Score=101.65 Aligned_cols=93 Identities=16% Similarity=0.259 Sum_probs=76.1
Q ss_pred CCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEEc
Q 039591 130 QPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFLA 209 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~~ 209 (284)
++.+|||+||| .|..+..+++ . +++|+|+.+++.|+++ +++++++|+.+.....+.||+|++.
T Consensus 47 ~~~~vLDiG~G-~G~~~~~l~~---~----~~vD~s~~~~~~a~~~---------~~~~~~~d~~~~~~~~~~fD~v~~~ 109 (219)
T 1vlm_A 47 PEGRGVEIGVG-TGRFAVPLKI---K----IGVEPSERMAEIARKR---------GVFVLKGTAENLPLKDESFDFALMV 109 (219)
T ss_dssp CSSCEEEETCT-TSTTHHHHTC---C----EEEESCHHHHHHHHHT---------TCEEEECBTTBCCSCTTCEEEEEEE
T ss_pred CCCcEEEeCCC-CCHHHHHHHH---H----hccCCCHHHHHHHHhc---------CCEEEEcccccCCCCCCCeeEEEEc
Confidence 38899999999 8988888876 2 9999999999999876 3788999987654333689999988
Q ss_pred CcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 210 ALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 210 ~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
...... ++...+++++.+.|+|||.+++..
T Consensus 110 ~~l~~~-~~~~~~l~~~~~~L~pgG~l~i~~ 139 (219)
T 1vlm_A 110 TTICFV-DDPERALKEAYRILKKGGYLIVGI 139 (219)
T ss_dssp SCGGGS-SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chHhhc-cCHHHHHHHHHHHcCCCcEEEEEE
Confidence 655332 355789999999999999999875
No 224
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.18 E-value=4.3e-11 Score=98.61 Aligned_cols=94 Identities=13% Similarity=0.112 Sum_probs=74.0
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+|||+||| .|..++.+++ .+ +|+++|+|+.+++. . .+++++++|+.+... .+.||+|++
T Consensus 22 ~~~~~vLD~GcG-~G~~~~~l~~---~~-~v~gvD~s~~~~~~------~-----~~~~~~~~d~~~~~~-~~~fD~i~~ 84 (170)
T 3q87_B 22 LEMKIVLDLGTS-TGVITEQLRK---RN-TVVSTDLNIRALES------H-----RGGNLVRADLLCSIN-QESVDVVVF 84 (170)
T ss_dssp CCSCEEEEETCT-TCHHHHHHTT---TS-EEEEEESCHHHHHT------C-----SSSCEEECSTTTTBC-GGGCSEEEE
T ss_pred CCCCeEEEeccC-ccHHHHHHHh---cC-cEEEEECCHHHHhc------c-----cCCeEEECChhhhcc-cCCCCEEEE
Confidence 467799999999 9999999998 34 99999999999987 1 468899999987332 278999999
Q ss_pred cCcCCCCH--------HHHHHHHHHHHhccccCcEEEEEe
Q 039591 209 AALVGMSK--------EEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~~~~~--------~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+....... .+...+++++.+.+ |||.+++..
T Consensus 85 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~ 123 (170)
T 3q87_B 85 NPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLV 123 (170)
T ss_dssp CCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEE
T ss_pred CCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEE
Confidence 87653211 12356888888888 999998865
No 225
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.17 E-value=6.2e-11 Score=96.22 Aligned_cols=99 Identities=14% Similarity=0.089 Sum_probs=75.6
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhh--------cc
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVK--------EK 199 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~--------~~ 199 (284)
..++.+|||+||| .|..+..+++...++.+++++|+++ +++. .+++++++|+.+.. ..
T Consensus 20 ~~~~~~vLd~G~G-~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~------------~~~~~~~~d~~~~~~~~~~~~~~~ 85 (180)
T 1ej0_A 20 FKPGMTVVDLGAA-PGGWSQYVVTQIGGKGRIIACDLLP-MDPI------------VGVDFLQGDFRDELVMKALLERVG 85 (180)
T ss_dssp CCTTCEEEEESCT-TCHHHHHHHHHHCTTCEEEEEESSC-CCCC------------TTEEEEESCTTSHHHHHHHHHHHT
T ss_pred CCCCCeEEEeCCC-CCHHHHHHHHHhCCCCeEEEEECcc-cccc------------CcEEEEEcccccchhhhhhhccCC
Confidence 3677899999999 7888888888323568999999999 6421 46899999998753 23
Q ss_pred CCCccEEEEcCcCCCC---HHHH-------HHHHHHHHhccccCcEEEEEe
Q 039591 200 LGEYDCIFLAALVGMS---KEEK-------MKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 200 l~~fD~V~~~~~~~~~---~~~k-------~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.+.||+|+++...... ..+. ..+++++.+.|+|||.+++..
T Consensus 86 ~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (180)
T 1ej0_A 86 DSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKV 136 (180)
T ss_dssp TCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 3689999997654321 1111 689999999999999999865
No 226
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.16 E-value=1.1e-10 Score=108.02 Aligned_cols=100 Identities=11% Similarity=0.085 Sum_probs=78.6
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC--------
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL-------- 200 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l-------- 200 (284)
..+.+|||+||| .|..++.+|+ ...+|+++|+|+.+++.|+++++..+ + .+++|+++|+.+....+
T Consensus 212 ~~~~~vLDl~cG-~G~~~l~la~---~~~~V~gvd~~~~ai~~a~~n~~~ng-~-~~v~~~~~d~~~~~~~~~~~~~~~~ 285 (369)
T 3bt7_A 212 GSKGDLLELYCG-NGNFSLALAR---NFDRVLATEIAKPSVAAAQYNIAANH-I-DNVQIIRMAAEEFTQAMNGVREFNR 285 (369)
T ss_dssp TCCSEEEEESCT-TSHHHHHHGG---GSSEEEEECCCHHHHHHHHHHHHHTT-C-CSEEEECCCSHHHHHHHSSCCCCTT
T ss_pred cCCCEEEEccCC-CCHHHHHHHh---cCCEEEEEECCHHHHHHHHHHHHHcC-C-CceEEEECCHHHHHHHHhhcccccc
Confidence 346899999999 8999999987 45799999999999999999988744 4 58999999998764322
Q ss_pred --------CCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEec
Q 039591 201 --------GEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 201 --------~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
..||+|+++.+.. .+.+.+.+.|+++|.+++.+.
T Consensus 286 l~~~~~~~~~fD~Vv~dPPr~-------g~~~~~~~~l~~~g~ivyvsc 327 (369)
T 3bt7_A 286 LQGIDLKSYQCETIFVDPPRS-------GLDSETEKMVQAYPRILYISC 327 (369)
T ss_dssp GGGSCGGGCCEEEEEECCCTT-------CCCHHHHHHHTTSSEEEEEES
T ss_pred ccccccccCCCCEEEECcCcc-------ccHHHHHHHHhCCCEEEEEEC
Confidence 2799999997652 122345556678999888773
No 227
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.15 E-value=1.2e-10 Score=110.74 Aligned_cols=109 Identities=21% Similarity=0.237 Sum_probs=84.2
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCC-cEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC--CCcc
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKA-THFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL--GEYD 204 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~-~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l--~~fD 204 (284)
..++.+|||+|||| |..+..+++ ..++ ++|+++|+|+.+++.++++++..| + .+++++++|+.+....+ +.||
T Consensus 257 ~~~g~~VLDlgaG~-G~~t~~la~-~~~~~~~v~a~D~s~~~l~~~~~~~~~~g-~-~~v~~~~~D~~~~~~~~~~~~fD 332 (450)
T 2yxl_A 257 PKPGETVVDLAAAP-GGKTTHLAE-LMKNKGKIYAFDVDKMRMKRLKDFVKRMG-I-KIVKPLVKDARKAPEIIGEEVAD 332 (450)
T ss_dssp CCTTCEEEESSCTT-CHHHHHHHH-HTTTCSEEEEECSCHHHHHHHHHHHHHTT-C-CSEEEECSCTTCCSSSSCSSCEE
T ss_pred CCCcCEEEEeCCCc-cHHHHHHHH-HcCCCCEEEEEcCCHHHHHHHHHHHHHcC-C-CcEEEEEcChhhcchhhccCCCC
Confidence 46788999999995 555666666 3455 899999999999999999998866 3 57999999998754223 5799
Q ss_pred EEEEcCcC---CC---CHH---------------HHHHHHHHHHhccccCcEEEEEe
Q 039591 205 CIFLAALV---GM---SKE---------------EKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 205 ~V~~~~~~---~~---~~~---------------~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+|+++++. +. .++ ....+++++.+.|||||++++.+
T Consensus 333 ~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~t 389 (450)
T 2yxl_A 333 KVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTT 389 (450)
T ss_dssp EEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred EEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 99987543 11 111 12678999999999999999865
No 228
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.14 E-value=7.6e-10 Score=92.92 Aligned_cols=98 Identities=20% Similarity=0.257 Sum_probs=74.7
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEE
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIF 207 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~ 207 (284)
..++.+|||+||| .|..++.+++ .+..+|+++|+|+.+++.|+++.. +++++++|+.+.. +.||+|+
T Consensus 49 ~~~~~~vlD~gcG-~G~~~~~l~~--~~~~~v~~vD~~~~~~~~a~~~~~-------~~~~~~~d~~~~~---~~~D~v~ 115 (200)
T 1ne2_A 49 NIGGRSVIDAGTG-NGILACGSYL--LGAESVTAFDIDPDAIETAKRNCG-------GVNFMVADVSEIS---GKYDTWI 115 (200)
T ss_dssp SSBTSEEEEETCT-TCHHHHHHHH--TTBSEEEEEESCHHHHHHHHHHCT-------TSEEEECCGGGCC---CCEEEEE
T ss_pred CCCCCEEEEEeCC-ccHHHHHHHH--cCCCEEEEEECCHHHHHHHHHhcC-------CCEEEECcHHHCC---CCeeEEE
Confidence 4577899999999 8999999988 244579999999999999999853 5899999998742 6899999
Q ss_pred EcCcCCCCH-HHHHHHHHHHHhccccCcEEEEEe
Q 039591 208 LAALVGMSK-EEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 208 ~~~~~~~~~-~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
++.+.+... .....+++.+.+.+ |+++++..
T Consensus 116 ~~~p~~~~~~~~~~~~l~~~~~~~--g~~~~~~~ 147 (200)
T 1ne2_A 116 MNPPFGSVVKHSDRAFIDKAFETS--MWIYSIGN 147 (200)
T ss_dssp ECCCC-------CHHHHHHHHHHE--EEEEEEEE
T ss_pred ECCCchhccCchhHHHHHHHHHhc--CcEEEEEc
Confidence 998754332 22357888888888 55555544
No 229
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.14 E-value=6.5e-10 Score=104.87 Aligned_cols=99 Identities=23% Similarity=0.327 Sum_probs=80.7
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEE
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIF 207 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~ 207 (284)
..++.+|||+||| .|..++.+|+ .+.+|+++|+|+.+++.|+++++..+ + . ++|+++|+.+... ..||+|+
T Consensus 288 ~~~~~~VLDlgcG-~G~~sl~la~---~~~~V~gvD~s~~ai~~A~~n~~~ng-l-~-v~~~~~d~~~~~~--~~fD~Vv 358 (425)
T 2jjq_A 288 LVEGEKILDMYSG-VGTFGIYLAK---RGFNVKGFDSNEFAIEMARRNVEINN-V-D-AEFEVASDREVSV--KGFDTVI 358 (425)
T ss_dssp HCCSSEEEEETCT-TTHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHHHT-C-C-EEEEECCTTTCCC--TTCSEEE
T ss_pred cCCCCEEEEeecc-chHHHHHHHH---cCCEEEEEECCHHHHHHHHHHHHHcC-C-c-EEEEECChHHcCc--cCCCEEE
Confidence 3677899999999 9999999998 46799999999999999999987644 4 3 9999999987543 3799999
Q ss_pred EcCcC-CCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 208 LAALV-GMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 208 ~~~~~-~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
++.+. +.. ..+++.+. .++|||++++..
T Consensus 359 ~dPPr~g~~----~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 359 VDPPRAGLH----PRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp ECCCTTCSC----HHHHHHHH-HHCCSEEEEEES
T ss_pred EcCCccchH----HHHHHHHH-hcCCCcEEEEEC
Confidence 99764 333 34666655 599999988865
No 230
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.14 E-value=1.4e-10 Score=103.68 Aligned_cols=104 Identities=20% Similarity=0.243 Sum_probs=77.7
Q ss_pred ccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEE
Q 039591 127 GVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCI 206 (284)
Q Consensus 127 ~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V 206 (284)
...++++||||||| .|..+..+++ .+.+|+++|+|+.+++.|+++.+..+ ...+++++++|+.+. ++..||+|
T Consensus 25 ~~~~~~~VLDiG~G-~G~lt~~L~~---~~~~v~~vD~~~~~~~~a~~~~~~~~-~~~~v~~~~~D~~~~--~~~~fD~v 97 (285)
T 1zq9_A 25 ALRPTDVVLEVGPG-TGNMTVKLLE---KAKKVVACELDPRLVAELHKRVQGTP-VASKLQVLVGDVLKT--DLPFFDTC 97 (285)
T ss_dssp CCCTTCEEEEECCT-TSTTHHHHHH---HSSEEEEEESCHHHHHHHHHHHTTST-TGGGEEEEESCTTTS--CCCCCSEE
T ss_pred CCCCCCEEEEEcCc-ccHHHHHHHh---hCCEEEEEECCHHHHHHHHHHHHhcC-CCCceEEEEcceecc--cchhhcEE
Confidence 34678899999999 8888889988 36799999999999999999886543 335799999999864 34589999
Q ss_pred EEcCcCCCCHHHHHHHHHH--------------H--HhccccCcEEE
Q 039591 207 FLAALVGMSKEEKMKIIRH--------------I--RKYMKDGGILL 237 (284)
Q Consensus 207 ~~~~~~~~~~~~k~~~l~~--------------~--~~~L~pGG~lv 237 (284)
+.+.+..+..+....++++ + ...++|||.+.
T Consensus 98 v~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 98 VANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp EEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred EEecCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 9987664432322333322 1 24788888763
No 231
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.13 E-value=2.3e-10 Score=107.94 Aligned_cols=108 Identities=17% Similarity=0.149 Sum_probs=83.5
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhc--cCCCccE
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKE--KLGEYDC 205 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~--~l~~fD~ 205 (284)
..++.+|||+|||| |..+..+++ ..++++|+++|+|+.+++.++++++..| .+++++++|+.+... ..+.||+
T Consensus 244 ~~~g~~VLDlgaG~-G~~t~~la~-~~~~~~v~a~D~~~~~l~~~~~~~~~~g---~~~~~~~~D~~~~~~~~~~~~fD~ 318 (429)
T 1sqg_A 244 PQNGEHILDLCAAP-GGKTTHILE-VAPEAQVVAVDIDEQRLSRVYDNLKRLG---MKATVKQGDGRYPSQWCGEQQFDR 318 (429)
T ss_dssp CCTTCEEEEESCTT-CHHHHHHHH-HCTTCEEEEEESSTTTHHHHHHHHHHTT---CCCEEEECCTTCTHHHHTTCCEEE
T ss_pred CCCcCeEEEECCCc-hHHHHHHHH-HcCCCEEEEECCCHHHHHHHHHHHHHcC---CCeEEEeCchhhchhhcccCCCCE
Confidence 46788999999996 555666666 4566899999999999999999998865 358999999986542 2257999
Q ss_pred EEEcCcC---CC---CHH---------------HHHHHHHHHHhccccCcEEEEEe
Q 039591 206 IFLAALV---GM---SKE---------------EKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 206 V~~~~~~---~~---~~~---------------~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|+++++. |. .++ ....+++++.+.|||||++++.+
T Consensus 319 Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvyst 374 (429)
T 1sqg_A 319 ILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYAT 374 (429)
T ss_dssp EEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred EEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 9997643 11 111 12588999999999999999866
No 232
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.12 E-value=4.5e-11 Score=111.93 Aligned_cols=104 Identities=11% Similarity=0.095 Sum_probs=79.7
Q ss_pred ccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCC-eEEEEcchhhhhccCCCccE
Q 039591 127 GVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKR-MKFLTGDILQVKEKLGEYDC 205 (284)
Q Consensus 127 ~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~-v~~~~~D~~~~~~~l~~fD~ 205 (284)
...++.+||||||| .|..+..+++ .+.+|+++|+|+.+++.|++. + .... ..|..+++.+.....++||+
T Consensus 104 ~~~~~~~VLDiGcG-~G~~~~~l~~---~g~~v~gvD~s~~~~~~a~~~----~-~~~~~~~~~~~~~~~l~~~~~~fD~ 174 (416)
T 4e2x_A 104 LTGPDPFIVEIGCN-DGIMLRTIQE---AGVRHLGFEPSSGVAAKAREK----G-IRVRTDFFEKATADDVRRTEGPANV 174 (416)
T ss_dssp TCSSSCEEEEETCT-TTTTHHHHHH---TTCEEEEECCCHHHHHHHHTT----T-CCEECSCCSHHHHHHHHHHHCCEEE
T ss_pred CCCCCCEEEEecCC-CCHHHHHHHH---cCCcEEEECCCHHHHHHHHHc----C-CCcceeeechhhHhhcccCCCCEEE
Confidence 34678899999999 8999999998 467999999999999999976 2 1111 12333444443333378999
Q ss_pred EEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 206 IFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 206 V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|++.....+. ++...+++++.+.|||||++++..
T Consensus 175 I~~~~vl~h~-~d~~~~l~~~~r~LkpgG~l~i~~ 208 (416)
T 4e2x_A 175 IYAANTLCHI-PYVQSVLEGVDALLAPDGVFVFED 208 (416)
T ss_dssp EEEESCGGGC-TTHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECChHHhc-CCHHHHHHHHHHHcCCCeEEEEEe
Confidence 9998766444 467899999999999999999875
No 233
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.10 E-value=1.3e-10 Score=113.40 Aligned_cols=106 Identities=17% Similarity=0.214 Sum_probs=79.9
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhcc--CCCccEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEK--LGEYDCI 206 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~--l~~fD~V 206 (284)
..|.+||||||| .|+.+..||+ .|+.|+|||.++.+++.|+..+...|. .+++|.++|+.+.... .++||+|
T Consensus 65 ~~~~~vLDvGCG-~G~~~~~la~---~ga~V~giD~~~~~i~~a~~~a~~~~~--~~~~~~~~~~~~~~~~~~~~~fD~v 138 (569)
T 4azs_A 65 GRPLNVLDLGCA-QGFFSLSLAS---KGATIVGIDFQQENINVCRALAEENPD--FAAEFRVGRIEEVIAALEEGEFDLA 138 (569)
T ss_dssp TSCCEEEEETCT-TSHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHTSTT--SEEEEEECCHHHHHHHCCTTSCSEE
T ss_pred CCCCeEEEECCC-CcHHHHHHHh---CCCEEEEECCCHHHHHHHHHHHHhcCC--CceEEEECCHHHHhhhccCCCccEE
Confidence 457899999999 9999999998 689999999999999999998876442 4699999999886433 3689999
Q ss_pred EEcCcCCCC-HHHHHHHHHHHHhccccCcEEEEEe
Q 039591 207 FLAALVGMS-KEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 207 ~~~~~~~~~-~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
++...+.+- .++...-+..+.+.++++|...+..
T Consensus 139 ~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~ 173 (569)
T 4azs_A 139 IGLSVFHHIVHLHGIDEVKRLLSRLADVTQAVILE 173 (569)
T ss_dssp EEESCHHHHHHHHCHHHHHHHHHHHHHHSSEEEEE
T ss_pred EECcchhcCCCHHHHHHHHHHHHHhccccceeeEE
Confidence 988755321 1222233345666777777655443
No 234
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.10 E-value=2.2e-10 Score=104.97 Aligned_cols=98 Identities=12% Similarity=0.268 Sum_probs=80.4
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+||||||| .|..+..+++ ..|+.+++++|+ +.+++.|++. .+++|+.+|+.+ ++..||+|++
T Consensus 187 ~~~~~vlDvG~G-~G~~~~~l~~-~~p~~~~~~~D~-~~~~~~a~~~--------~~v~~~~~d~~~---~~p~~D~v~~ 252 (352)
T 1fp2_A 187 DGLESIVDVGGG-TGTTAKIICE-TFPKLKCIVFDR-PQVVENLSGS--------NNLTYVGGDMFT---SIPNADAVLL 252 (352)
T ss_dssp TTCSEEEEETCT-TSHHHHHHHH-HCTTCEEEEEEC-HHHHTTCCCB--------TTEEEEECCTTT---CCCCCSEEEE
T ss_pred ccCceEEEeCCC-ccHHHHHHHH-HCCCCeEEEeeC-HHHHhhcccC--------CCcEEEeccccC---CCCCccEEEe
Confidence 567899999999 8999999998 568899999999 9999877642 359999999975 2335999998
Q ss_pred cCcCC-CCHHHHHHHHHHHHhcccc---CcEEEEEe
Q 039591 209 AALVG-MSKEEKMKIIRHIRKYMKD---GGILLVRS 240 (284)
Q Consensus 209 ~~~~~-~~~~~k~~~l~~~~~~L~p---GG~lv~~~ 240 (284)
....+ +..++..++++++.+.||| ||++++..
T Consensus 253 ~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 253 KYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEE
T ss_pred ehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 77654 4445556999999999999 99998765
No 235
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.09 E-value=2.3e-10 Score=105.85 Aligned_cols=98 Identities=19% Similarity=0.283 Sum_probs=80.1
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.+..+||||||| .|..+..+++ ..|+.+++++|+ |.+++.|++. .+++|+.+|+.+ ..+ .. |+|++
T Consensus 202 ~~~~~vlDvG~G-~G~~~~~l~~-~~p~~~~~~~D~-~~~~~~a~~~--------~~v~~~~~d~~~-~~p-~~-D~v~~ 267 (368)
T 3reo_A 202 EGLTTIVDVGGG-TGAVASMIVA-KYPSINAINFDL-PHVIQDAPAF--------SGVEHLGGDMFD-GVP-KG-DAIFI 267 (368)
T ss_dssp TTCSEEEEETCT-TSHHHHHHHH-HCTTCEEEEEEC-HHHHTTCCCC--------TTEEEEECCTTT-CCC-CC-SEEEE
T ss_pred cCCCEEEEeCCC-cCHHHHHHHH-hCCCCEEEEEeh-HHHHHhhhhc--------CCCEEEecCCCC-CCC-CC-CEEEE
Confidence 456899999999 8999999998 578999999999 8888776532 579999999986 222 33 99998
Q ss_pred cCcCC-CCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 209 AALVG-MSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~~-~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
....+ +..++..++++++.+.|+|||+|++..
T Consensus 268 ~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 300 (368)
T 3reo_A 268 KWICHDWSDEHCLKLLKNCYAALPDHGKVIVAE 300 (368)
T ss_dssp ESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred echhhcCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 77654 455667899999999999999998865
No 236
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.09 E-value=6.8e-10 Score=96.61 Aligned_cols=102 Identities=12% Similarity=0.143 Sum_probs=77.9
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+||||||| +|..++.+. ++.+++++|+|+.+++.+++++...+ .+.+|..+|....... ++||+|++
T Consensus 104 ~~p~~VLDlGCG-~gpLal~~~----~~~~y~a~DId~~~i~~ar~~~~~~g---~~~~~~v~D~~~~~~~-~~~DvvLl 174 (253)
T 3frh_A 104 ETPRRVLDIACG-LNPLALYER----GIASVWGCDIHQGLGDVITPFAREKD---WDFTFALQDVLCAPPA-EAGDLALI 174 (253)
T ss_dssp CCCSEEEEETCT-TTHHHHHHT----TCSEEEEEESBHHHHHHHHHHHHHTT---CEEEEEECCTTTSCCC-CBCSEEEE
T ss_pred CCCCeEEEecCC-ccHHHHHhc----cCCeEEEEeCCHHHHHHHHHHHHhcC---CCceEEEeecccCCCC-CCcchHHH
Confidence 578899999999 887775554 78899999999999999999977644 6789999998754322 68999987
Q ss_pred cCcCCC-CHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 209 AALVGM-SKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~~~-~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.-..+. ...++...+ .+.+.|+++++++-.-
T Consensus 175 lk~lh~LE~q~~~~~~-~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 175 FKLLPLLEREQAGSAM-ALLQSLNTPRMAVSFP 206 (253)
T ss_dssp ESCHHHHHHHSTTHHH-HHHHHCBCSEEEEEEE
T ss_pred HHHHHHhhhhchhhHH-HHHHHhcCCCEEEEcC
Confidence 743322 122334444 7888999999988654
No 237
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.08 E-value=4.2e-10 Score=103.95 Aligned_cols=98 Identities=16% Similarity=0.239 Sum_probs=80.4
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.+..+||||||| .|..+..+++ ..|+.+++++|+ |.+++.|++. .+++|+.+|+.+ ..+ .. |+|++
T Consensus 200 ~~~~~vlDvG~G-~G~~~~~l~~-~~p~~~~~~~D~-~~~~~~a~~~--------~~v~~~~~D~~~-~~p-~~-D~v~~ 265 (364)
T 3p9c_A 200 EGLGTLVDVGGG-VGATVAAIAA-HYPTIKGVNFDL-PHVISEAPQF--------PGVTHVGGDMFK-EVP-SG-DTILM 265 (364)
T ss_dssp TTCSEEEEETCT-TSHHHHHHHH-HCTTCEEEEEEC-HHHHTTCCCC--------TTEEEEECCTTT-CCC-CC-SEEEE
T ss_pred cCCCEEEEeCCC-CCHHHHHHHH-HCCCCeEEEecC-HHHHHhhhhc--------CCeEEEeCCcCC-CCC-CC-CEEEe
Confidence 567899999999 8999999988 578999999999 8888766531 579999999986 222 33 99998
Q ss_pred cCcCC-CCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 209 AALVG-MSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~~-~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
....+ +..++..++++++.+.|||||+|++..
T Consensus 266 ~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e 298 (364)
T 3p9c_A 266 KWILHDWSDQHCATLLKNCYDALPAHGKVVLVQ 298 (364)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred hHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 77664 455677899999999999999998865
No 238
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.07 E-value=5.1e-10 Score=93.73 Aligned_cols=97 Identities=18% Similarity=0.187 Sum_probs=71.7
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCC--CcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhh---------
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLK--ATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVK--------- 197 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~--~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~--------- 197 (284)
.++.+|||+||| .|..+..+++ ..+ +++|+++|+++.+ . ..+++++++|+.+..
T Consensus 21 ~~~~~vLDlGcG-~G~~~~~l~~-~~~~~~~~v~gvD~s~~~-----------~--~~~v~~~~~d~~~~~~~~~~~~~~ 85 (201)
T 2plw_A 21 KKNKIILDIGCY-PGSWCQVILE-RTKNYKNKIIGIDKKIMD-----------P--IPNVYFIQGEIGKDNMNNIKNINY 85 (201)
T ss_dssp CTTEEEEEESCT-TCHHHHHHHH-HTTTSCEEEEEEESSCCC-----------C--CTTCEEEECCTTTTSSCCC-----
T ss_pred CCCCEEEEeCCC-CCHHHHHHHH-HcCCCCceEEEEeCCccC-----------C--CCCceEEEccccchhhhhhccccc
Confidence 677899999999 6777888887 455 6899999999931 1 146899999987643
Q ss_pred ----------------ccCCCccEEEEcCcCCCC---HHHH-------HHHHHHHHhccccCcEEEEEe
Q 039591 198 ----------------EKLGEYDCIFLAALVGMS---KEEK-------MKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 198 ----------------~~l~~fD~V~~~~~~~~~---~~~k-------~~~l~~~~~~L~pGG~lv~~~ 240 (284)
...+.||+|+++...... ..+. ..+++.+.+.|+|||.+++..
T Consensus 86 i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 154 (201)
T 2plw_A 86 IDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKM 154 (201)
T ss_dssp ------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 122589999997643321 1221 248899999999999999855
No 239
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.07 E-value=3.1e-10 Score=95.57 Aligned_cols=124 Identities=19% Similarity=0.281 Sum_probs=82.1
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhcc------C--
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEK------L-- 200 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~------l-- 200 (284)
.++.+|||+||| .|..+..+++ .+++|+++|+++.. . ..+++++++|+.+.... +
T Consensus 24 ~~g~~VLDlG~G-~G~~s~~la~---~~~~V~gvD~~~~~-----------~--~~~v~~~~~D~~~~~~~~~~~~~~~~ 86 (191)
T 3dou_A 24 RKGDAVIEIGSS-PGGWTQVLNS---LARKIISIDLQEME-----------E--IAGVRFIRCDIFKETIFDDIDRALRE 86 (191)
T ss_dssp CTTCEEEEESCT-TCHHHHHHTT---TCSEEEEEESSCCC-----------C--CTTCEEEECCTTSSSHHHHHHHHHHH
T ss_pred CCCCEEEEEeec-CCHHHHHHHH---cCCcEEEEeccccc-----------c--CCCeEEEEccccCHHHHHHHHHHhhc
Confidence 678999999999 5777788887 28899999999841 1 15799999998763210 1
Q ss_pred ---CCccEEEEcCcC---CCCHHH-------HHHHHHHHHhccccCcEEEEEeccchh--hhcCCCCCCCCC-CCcEEEE
Q 039591 201 ---GEYDCIFLAALV---GMSKEE-------KMKIIRHIRKYMKDGGILLVRSAKGAR--AFLYPVVERHDL-LDFEVLS 264 (284)
Q Consensus 201 ---~~fD~V~~~~~~---~~~~~~-------k~~~l~~~~~~L~pGG~lv~~~~~g~~--~~lyp~v~~~~l-~gf~~~~ 264 (284)
+.||+|+++... +....+ ...+++.+.++|||||.+++....+.. .+. ..+ ..|+.+.
T Consensus 87 ~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~~~~~------~~l~~~F~~v~ 160 (191)
T 3dou_A 87 EGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMTNDFI------AIWRKNFSSYK 160 (191)
T ss_dssp HTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHHHHHH------HHHGGGEEEEE
T ss_pred ccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCHHHHH------HHHHHhcCEEE
Confidence 389999998643 221111 257888899999999999986643322 111 011 3588888
Q ss_pred EEcCCCceeeE
Q 039591 265 IFHPIDEVINS 275 (284)
Q Consensus 265 ~~~p~~~v~ns 275 (284)
.+.|....-.|
T Consensus 161 ~~kP~asR~~s 171 (191)
T 3dou_A 161 ISKPPASRGSS 171 (191)
T ss_dssp EECC------C
T ss_pred EECCCCccCCC
Confidence 88886544343
No 240
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.07 E-value=2.1e-09 Score=97.23 Aligned_cols=110 Identities=16% Similarity=0.116 Sum_probs=81.1
Q ss_pred ccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhcc---CCCc
Q 039591 127 GVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEK---LGEY 203 (284)
Q Consensus 127 ~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~---l~~f 203 (284)
...++++|||+||||.| .++.+|+...+.++|+++|+++.+++.++++++++| + .+++++++|+.+.... .+.|
T Consensus 99 ~~~~g~~VLDlcaG~G~-kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g-~-~~v~~~~~D~~~~~~~~~~~~~f 175 (309)
T 2b9e_A 99 DPPPGSHVIDACAAPGN-KTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAG-V-SCCELAEEDFLAVSPSDPRYHEV 175 (309)
T ss_dssp CCCTTCEEEESSCTTCH-HHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTT-C-CSEEEEECCGGGSCTTCGGGTTE
T ss_pred CCCCCCEEEEeCCChhH-HHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC-C-CeEEEEeCChHhcCccccccCCC
Confidence 34778999999999655 455566523356899999999999999999998866 3 5799999999875432 2579
Q ss_pred cEEEEcCcC---CCC---HH-----------------HHHHHHHHHHhccccCcEEEEEe
Q 039591 204 DCIFLAALV---GMS---KE-----------------EKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 204 D~V~~~~~~---~~~---~~-----------------~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|.|+++++. |.. ++ ...++++++.+.++ ||+|++.+
T Consensus 176 D~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsT 234 (309)
T 2b9e_A 176 HYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYST 234 (309)
T ss_dssp EEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEE
T ss_pred CEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEEC
Confidence 999998653 211 01 11357888888887 99999865
No 241
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.07 E-value=2.6e-10 Score=105.39 Aligned_cols=98 Identities=16% Similarity=0.232 Sum_probs=79.9
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+||||||| .|..+..+++ ..++.+++++|+ +.+++.|++. .+++|+.+|+.+ ++..||+|++
T Consensus 208 ~~~~~vLDvG~G-~G~~~~~l~~-~~~~~~~~~~D~-~~~~~~a~~~--------~~v~~~~~d~~~---~~~~~D~v~~ 273 (372)
T 1fp1_D 208 EGISTLVDVGGG-SGRNLELIIS-KYPLIKGINFDL-PQVIENAPPL--------SGIEHVGGDMFA---SVPQGDAMIL 273 (372)
T ss_dssp TTCSEEEEETCT-TSHHHHHHHH-HCTTCEEEEEEC-HHHHTTCCCC--------TTEEEEECCTTT---CCCCEEEEEE
T ss_pred CCCCEEEEeCCC-CcHHHHHHHH-HCCCCeEEEeCh-HHHHHhhhhc--------CCCEEEeCCccc---CCCCCCEEEE
Confidence 567899999999 8999999988 568889999999 9998876642 469999999976 2334999998
Q ss_pred cCcCC-CCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 209 AALVG-MSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~~-~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
....+ +..++...+++++.+.|+|||++++..
T Consensus 274 ~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 274 KAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp ESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ecccccCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 77654 344455699999999999999998864
No 242
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.06 E-value=1.5e-10 Score=101.76 Aligned_cols=105 Identities=10% Similarity=0.048 Sum_probs=83.3
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+||||||| +|..++.++. ..+.++++++|+|+.+++.+++++...| ...++...|..... .-++||++++
T Consensus 131 ~~p~~VLDLGCG-~GpLAl~~~~-~~p~a~y~a~DId~~~le~a~~~l~~~g---~~~~~~v~D~~~~~-p~~~~DvaL~ 204 (281)
T 3lcv_B 131 PRPNTLRDLACG-LNPLAAPWMG-LPAETVYIASDIDARLVGFVDEALTRLN---VPHRTNVADLLEDR-LDEPADVTLL 204 (281)
T ss_dssp CCCSEEEETTCT-TGGGCCTTTT-CCTTCEEEEEESBHHHHHHHHHHHHHTT---CCEEEEECCTTTSC-CCSCCSEEEE
T ss_pred CCCceeeeeccC-ccHHHHHHHh-hCCCCEEEEEeCCHHHHHHHHHHHHhcC---CCceEEEeeecccC-CCCCcchHHH
Confidence 558899999999 8888888877 5688999999999999999999998755 45888899987532 2278999998
Q ss_pred cCcCCC-CHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 209 AALVGM-SKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~~~-~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.-..+. ....|...+ .+.+.|+|||+++-..
T Consensus 205 lkti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp 236 (281)
T 3lcv_B 205 LKTLPCLETQQRGSGW-EVIDIVNSPNIVVTFP 236 (281)
T ss_dssp TTCHHHHHHHSTTHHH-HHHHHSSCSEEEEEEE
T ss_pred HHHHHHhhhhhhHHHH-HHHHHhCCCCEEEecc
Confidence 765532 223344666 8999999999998654
No 243
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.06 E-value=2e-09 Score=101.65 Aligned_cols=102 Identities=14% Similarity=0.122 Sum_probs=80.4
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhcc----CCCc
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEK----LGEY 203 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~----l~~f 203 (284)
..++.+|||+||| .|..++.+++ .+.+|+++|+|+.+++.|+++++..+ + .+++|+++|+.+.... .+.|
T Consensus 284 ~~~~~~VLDlgcG-~G~~~~~la~---~~~~V~gvD~s~~al~~A~~n~~~~~-~-~~v~f~~~d~~~~l~~~~~~~~~f 357 (433)
T 1uwv_A 284 VQPEDRVLDLFCG-MGNFTLPLAT---QAASVVGVEGVPALVEKGQQNARLNG-L-QNVTFYHENLEEDVTKQPWAKNGF 357 (433)
T ss_dssp CCTTCEEEEESCT-TTTTHHHHHT---TSSEEEEEESCHHHHHHHHHHHHHTT-C-CSEEEEECCTTSCCSSSGGGTTCC
T ss_pred CCCCCEEEECCCC-CCHHHHHHHh---hCCEEEEEeCCHHHHHHHHHHHHHcC-C-CceEEEECCHHHHhhhhhhhcCCC
Confidence 3567899999999 9999999998 37899999999999999999987754 4 4899999999874322 2579
Q ss_pred cEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 204 DCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 204 D~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|+|+++.+.... .++++.+. .++|++++.+..
T Consensus 358 D~Vv~dPPr~g~----~~~~~~l~-~~~p~~ivyvsc 389 (433)
T 1uwv_A 358 DKVLLDPARAGA----AGVMQQII-KLEPIRIVYVSC 389 (433)
T ss_dssp SEEEECCCTTCC----HHHHHHHH-HHCCSEEEEEES
T ss_pred CEEEECCCCccH----HHHHHHHH-hcCCCeEEEEEC
Confidence 999999876322 24566655 478888777644
No 244
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.05 E-value=6.6e-10 Score=100.02 Aligned_cols=80 Identities=13% Similarity=0.182 Sum_probs=62.4
Q ss_pred ccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEE
Q 039591 127 GVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCI 206 (284)
Q Consensus 127 ~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V 206 (284)
...++++||||||| .|..+..+++ .+.+|+++|+|+.+++.|+++++..+ . .+++++++|+.+.. ...||+|
T Consensus 39 ~~~~~~~VLDiG~G-~G~lt~~La~---~~~~v~~vDi~~~~~~~a~~~~~~~~-~-~~v~~~~~D~~~~~--~~~~D~V 110 (299)
T 2h1r_A 39 KIKSSDIVLEIGCG-TGNLTVKLLP---LAKKVITIDIDSRMISEVKKRCLYEG-Y-NNLEVYEGDAIKTV--FPKFDVC 110 (299)
T ss_dssp CCCTTCEEEEECCT-TSTTHHHHTT---TSSEEEEECSCHHHHHHHHHHHHHTT-C-CCEEC----CCSSC--CCCCSEE
T ss_pred CCCCcCEEEEEcCc-CcHHHHHHHh---cCCEEEEEECCHHHHHHHHHHHHHcC-C-CceEEEECchhhCC--cccCCEE
Confidence 34678899999999 8888989987 46899999999999999999986544 3 67999999998643 3689999
Q ss_pred EEcCcCCC
Q 039591 207 FLAALVGM 214 (284)
Q Consensus 207 ~~~~~~~~ 214 (284)
+++.+...
T Consensus 111 v~n~py~~ 118 (299)
T 2h1r_A 111 TANIPYKI 118 (299)
T ss_dssp EEECCGGG
T ss_pred EEcCCccc
Confidence 99876543
No 245
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.03 E-value=3.9e-10 Score=95.59 Aligned_cols=120 Identities=16% Similarity=0.152 Sum_probs=83.9
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+||||||| .|..+..+ +.+|+++|+|+. +++++++|+.+.....+.||+|++
T Consensus 66 ~~~~~vLDiG~G-~G~~~~~l------~~~v~~~D~s~~-----------------~~~~~~~d~~~~~~~~~~fD~v~~ 121 (215)
T 2zfu_A 66 PASLVVADFGCG-DCRLASSI------RNPVHCFDLASL-----------------DPRVTVCDMAQVPLEDESVDVAVF 121 (215)
T ss_dssp CTTSCEEEETCT-TCHHHHHC------CSCEEEEESSCS-----------------STTEEESCTTSCSCCTTCEEEEEE
T ss_pred CCCCeEEEECCc-CCHHHHHh------hccEEEEeCCCC-----------------CceEEEeccccCCCCCCCEeEEEE
Confidence 567899999999 78766544 268999999987 246788998764433368999998
Q ss_pred cCcCCCCHHHHHHHHHHHHhccccCcEEEEEeccchhhhcCCCCCCC---C---CCCcEEEEEEcCCCceeeEEEEEeec
Q 039591 209 AALVGMSKEEKMKIIRHIRKYMKDGGILLVRSAKGARAFLYPVVERH---D---LLDFEVLSIFHPIDEVINSVILVRKP 282 (284)
Q Consensus 209 ~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~~g~~~~lyp~v~~~---~---l~gf~~~~~~~p~~~v~nsvi~~rk~ 282 (284)
....+ . .+...+++++.+.|+|||.+++...... ++ ... . -.||+++......+. -.+++++|+
T Consensus 122 ~~~l~-~-~~~~~~l~~~~~~L~~gG~l~i~~~~~~----~~--~~~~~~~~l~~~Gf~~~~~~~~~~~--~~~~~~~k~ 191 (215)
T 2zfu_A 122 CLSLM-G-TNIRDFLEEANRVLKPGGLLKVAEVSSR----FE--DVRTFLRAVTKLGFKIVSKDLTNSH--FFLFDFQKT 191 (215)
T ss_dssp ESCCC-S-SCHHHHHHHHHHHEEEEEEEEEEECGGG----CS--CHHHHHHHHHHTTEEEEEEECCSTT--CEEEEEEEC
T ss_pred ehhcc-c-cCHHHHHHHHHHhCCCCeEEEEEEcCCC----CC--CHHHHHHHHHHCCCEEEEEecCCCe--EEEEEEEec
Confidence 77654 2 5668999999999999999998753210 11 111 1 269998875433222 246777773
No 246
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.02 E-value=2.7e-09 Score=99.64 Aligned_cols=111 Identities=14% Similarity=0.051 Sum_probs=84.9
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcC---C----------------------------------CcEEEEEeCCHHHHH
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHL---K----------------------------------ATHFDNFDIDEAANN 170 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~---~----------------------------------~~~V~~vDis~~~~~ 170 (284)
..++..|+|.||| +|..++..|.... | ..+|+++|+|+.+++
T Consensus 199 ~~~~~~vlDp~CG-SGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~ 277 (393)
T 3k0b_A 199 WHPDRPFYDPVCG-SGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIE 277 (393)
T ss_dssp CCTTSCEEETTCT-TSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHH
T ss_pred CCCCCeEEEcCCC-CCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHH
Confidence 3677899999999 8988887775211 1 156999999999999
Q ss_pred HHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEEcCcCCCCHH---HHHHHHHHHHhcccc--CcEEEEEec
Q 039591 171 VARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFLAALVGMSKE---EKMKIIRHIRKYMKD--GGILLVRSA 241 (284)
Q Consensus 171 ~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~~~~~~~~~~---~k~~~l~~~~~~L~p--GG~lv~~~~ 241 (284)
.|+++++..| +.++++|+++|+.+.... +.||+|+++.+.+.... +...+++.+.+.|++ ||.+.+.+.
T Consensus 278 ~Ar~Na~~~g-l~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 351 (393)
T 3k0b_A 278 IAKQNAVEAG-LGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLTS 351 (393)
T ss_dssp HHHHHHHHTT-CTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEEC
T ss_pred HHHHHHHHcC-CCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 9999998755 667899999999875433 58999999988765432 345567777777766 888776664
No 247
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.00 E-value=6.3e-10 Score=101.85 Aligned_cols=109 Identities=18% Similarity=0.186 Sum_probs=83.9
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCC-----cEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCc
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKA-----THFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEY 203 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~-----~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~f 203 (284)
.++.+|||+||| +|..++.+++ ..+. .+++|+|+|+.+++.|+.+....+ + +++++++|..... ..++|
T Consensus 129 ~~~~~VlDp~cG-sG~~l~~~~~-~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g-~--~~~i~~~D~l~~~-~~~~f 202 (344)
T 2f8l_A 129 KKNVSILDPACG-TANLLTTVIN-QLELKGDVDVHASGVDVDDLLISLALVGADLQR-Q--KMTLLHQDGLANL-LVDPV 202 (344)
T ss_dssp CSEEEEEETTCT-TSHHHHHHHH-HHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHT-C--CCEEEESCTTSCC-CCCCE
T ss_pred CCCCEEEeCCCC-ccHHHHHHHH-HHHHhcCCCceEEEEECCHHHHHHHHHHHHhCC-C--CceEEECCCCCcc-ccCCc
Confidence 456899999999 7888877776 3332 789999999999999999987655 3 6899999987532 23689
Q ss_pred cEEEEcCcCCCCH-HH----------------HHHHHHHHHhccccCcEEEEEeccc
Q 039591 204 DCIFLAALVGMSK-EE----------------KMKIIRHIRKYMKDGGILLVRSAKG 243 (284)
Q Consensus 204 D~V~~~~~~~~~~-~~----------------k~~~l~~~~~~L~pGG~lv~~~~~g 243 (284)
|+|+.+.+.+... .+ ...+++++.+.|+|||++++...++
T Consensus 203 D~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~ 259 (344)
T 2f8l_A 203 DVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDA 259 (344)
T ss_dssp EEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGG
T ss_pred cEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECch
Confidence 9999998754321 11 1268999999999999998877444
No 248
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.00 E-value=9.8e-10 Score=102.89 Aligned_cols=78 Identities=19% Similarity=0.162 Sum_probs=66.3
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhc--cCCCCCeEEEEcchhhhhccC--CCcc
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATD--FEFEKRMKFLTGDILQVKEKL--GEYD 204 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~--~~l~~~v~~~~~D~~~~~~~l--~~fD 204 (284)
.++.+|||+||| +|..++.+++ .+.+|+++|+|+.+++.|+++++.. | + .+++++++|+.+..... +.||
T Consensus 92 ~~g~~VLDLgcG-~G~~al~LA~---~g~~V~~VD~s~~~l~~Ar~N~~~~~~g-l-~~i~~i~~Da~~~L~~~~~~~fD 165 (410)
T 3ll7_A 92 REGTKVVDLTGG-LGIDFIALMS---KASQGIYIERNDETAVAARHNIPLLLNE-G-KDVNILTGDFKEYLPLIKTFHPD 165 (410)
T ss_dssp CTTCEEEESSCS-SSHHHHHHHT---TCSEEEEEESCHHHHHHHHHHHHHHSCT-T-CEEEEEESCGGGSHHHHHHHCCS
T ss_pred CCCCEEEEeCCC-chHHHHHHHh---cCCEEEEEECCHHHHHHHHHhHHHhccC-C-CcEEEEECcHHHhhhhccCCCce
Confidence 348999999999 9999999998 4789999999999999999999876 5 4 68999999998753322 5899
Q ss_pred EEEEcCcC
Q 039591 205 CIFLAALV 212 (284)
Q Consensus 205 ~V~~~~~~ 212 (284)
+||++...
T Consensus 166 vV~lDPPr 173 (410)
T 3ll7_A 166 YIYVDPAR 173 (410)
T ss_dssp EEEECCEE
T ss_pred EEEECCCC
Confidence 99998654
No 249
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.99 E-value=7.3e-10 Score=99.32 Aligned_cols=103 Identities=15% Similarity=0.038 Sum_probs=72.2
Q ss_pred HHhhcc-CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEE-EEcchhhhhc-c
Q 039591 123 LKENGV-VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKF-LTGDILQVKE-K 199 (284)
Q Consensus 123 l~~~~~-~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~-~~~D~~~~~~-~ 199 (284)
+..+.. .++.+|||+||| +|..+..+++ .+..+|+++|+++.|++.+.+.- .++.. ...|+..... .
T Consensus 77 l~~~~~~~~g~~vLDiGcG-TG~~t~~L~~--~ga~~V~aVDvs~~mL~~a~r~~-------~rv~~~~~~ni~~l~~~~ 146 (291)
T 3hp7_A 77 LAVFNLSVEDMITIDIGAS-TGGFTDVMLQ--NGAKLVYAVDVGTNQLVWKLRQD-------DRVRSMEQYNFRYAEPVD 146 (291)
T ss_dssp HHHTTCCCTTCEEEEETCT-TSHHHHHHHH--TTCSEEEEECSSSSCSCHHHHTC-------TTEEEECSCCGGGCCGGG
T ss_pred HHhcCCCccccEEEecCCC-ccHHHHHHHh--CCCCEEEEEECCHHHHHHHHHhC-------cccceecccCceecchhh
Confidence 444443 467899999999 7877888887 24569999999999999865431 23322 2334433221 1
Q ss_pred C--CCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEE
Q 039591 200 L--GEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVR 239 (284)
Q Consensus 200 l--~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~ 239 (284)
+ ..||+|+++...... ..++.++.+.|+|||.+++-
T Consensus 147 l~~~~fD~v~~d~sf~sl----~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 147 FTEGLPSFASIDVSFISL----NLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp CTTCCCSEEEECCSSSCG----GGTHHHHHHHSCTTCEEEEE
T ss_pred CCCCCCCEEEEEeeHhhH----HHHHHHHHHHcCcCCEEEEE
Confidence 2 349999987654322 68999999999999999875
No 250
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.98 E-value=4.9e-09 Score=97.58 Aligned_cols=111 Identities=12% Similarity=0.039 Sum_probs=86.4
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcC---C----------------------------------CcEEEEEeCCHHHHH
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHL---K----------------------------------ATHFDNFDIDEAANN 170 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~---~----------------------------------~~~V~~vDis~~~~~ 170 (284)
..++..|+|.+|| +|..++..|.... | ..+|+++|+|+.+++
T Consensus 192 ~~~~~~llDp~CG-SGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~ 270 (384)
T 3ldg_A 192 WFPDKPFVDPTCG-SGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVE 270 (384)
T ss_dssp CCTTSCEEETTCT-TSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHH
T ss_pred CCCCCeEEEeCCc-CCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHH
Confidence 3677899999999 8988887775211 1 156999999999999
Q ss_pred HHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEEcCcCCCC---HHHHHHHHHHHHhcccc--CcEEEEEec
Q 039591 171 VARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFLAALVGMS---KEEKMKIIRHIRKYMKD--GGILLVRSA 241 (284)
Q Consensus 171 ~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~~~~~~~~---~~~k~~~l~~~~~~L~p--GG~lv~~~~ 241 (284)
.|+++++..| +.++++|.++|+.+.... +.||+|+++.+.|.. .++...+++.+.+.||+ |+.+.+.+.
T Consensus 271 ~Ar~Na~~~g-l~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 344 (384)
T 3ldg_A 271 IARKNAREVG-LEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTN 344 (384)
T ss_dssp HHHHHHHHTT-CTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEES
T ss_pred HHHHHHHHcC-CCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEEC
Confidence 9999998755 667899999999876433 589999999887532 34567788888877776 888777664
No 251
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.98 E-value=3.5e-09 Score=98.61 Aligned_cols=110 Identities=15% Similarity=0.166 Sum_probs=85.1
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcC-------------------------------------CCcEEEEEeCCHHHHHH
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHL-------------------------------------KATHFDNFDIDEAANNV 171 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~-------------------------------------~~~~V~~vDis~~~~~~ 171 (284)
.++.+|||+||| +|..++.+|.... +..+|+|+|+|+.+++.
T Consensus 194 ~~~~~vlDp~CG-SGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~ 272 (385)
T 3ldu_A 194 KAGRVLVDPMCG-SGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDI 272 (385)
T ss_dssp CTTSCEEETTCT-TCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHH
T ss_pred CCCCeEEEcCCC-CCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHH
Confidence 677899999999 8988888776211 11579999999999999
Q ss_pred HHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEEcCcCCCCH---HHHHHHHHHHHhcccc--CcEEEEEec
Q 039591 172 ARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFLAALVGMSK---EEKMKIIRHIRKYMKD--GGILLVRSA 241 (284)
Q Consensus 172 A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~~~~~~~~~---~~k~~~l~~~~~~L~p--GG~lv~~~~ 241 (284)
|++++...| +++.++|.++|+.+...+ +.||+|+++.+.+... ++...+++.+.+.|++ |+.+.+.++
T Consensus 273 Ar~Na~~~g-l~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 345 (385)
T 3ldu_A 273 ARENAEIAG-VDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLITS 345 (385)
T ss_dssp HHHHHHHHT-CGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEES
T ss_pred HHHHHHHcC-CCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEEC
Confidence 999998755 566899999999875432 5899999999876543 3445677777777776 777766553
No 252
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.97 E-value=2.7e-09 Score=95.89 Aligned_cols=81 Identities=16% Similarity=0.224 Sum_probs=66.2
Q ss_pred hccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccE
Q 039591 126 NGVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDC 205 (284)
Q Consensus 126 ~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~ 205 (284)
....++++||||||| .|..+..+++ .+.+|+++|+|+.+++.++++++. ..+++++++|+.+.......||+
T Consensus 46 l~~~~~~~VLEIG~G-~G~lT~~La~---~~~~V~aVEid~~li~~a~~~~~~----~~~v~vi~gD~l~~~~~~~~fD~ 117 (295)
T 3gru_A 46 ANLTKDDVVLEIGLG-KGILTEELAK---NAKKVYVIEIDKSLEPYANKLKEL----YNNIEIIWGDALKVDLNKLDFNK 117 (295)
T ss_dssp TTCCTTCEEEEECCT-TSHHHHHHHH---HSSEEEEEESCGGGHHHHHHHHHH----CSSEEEEESCTTTSCGGGSCCSE
T ss_pred cCCCCcCEEEEECCC-chHHHHHHHh---cCCEEEEEECCHHHHHHHHHHhcc----CCCeEEEECchhhCCcccCCccE
Confidence 344778899999999 8999999998 368999999999999999998763 25799999999875433356999
Q ss_pred EEEcCcCCC
Q 039591 206 IFLAALVGM 214 (284)
Q Consensus 206 V~~~~~~~~ 214 (284)
|+.+.+...
T Consensus 118 Iv~NlPy~i 126 (295)
T 3gru_A 118 VVANLPYQI 126 (295)
T ss_dssp EEEECCGGG
T ss_pred EEEeCcccc
Confidence 998876543
No 253
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.96 E-value=1.4e-09 Score=99.95 Aligned_cols=98 Identities=14% Similarity=0.275 Sum_probs=79.2
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+||||||| .|..+..+++ ..|+.+++++|+ +.+++.|++. .+++|+.+|+.+ +...||+|++
T Consensus 192 ~~~~~vlDvG~G-~G~~~~~l~~-~~p~~~~~~~D~-~~~~~~a~~~--------~~v~~~~~d~~~---~~~~~D~v~~ 257 (358)
T 1zg3_A 192 EGLESLVDVGGG-TGGVTKLIHE-IFPHLKCTVFDQ-PQVVGNLTGN--------ENLNFVGGDMFK---SIPSADAVLL 257 (358)
T ss_dssp HTCSEEEEETCT-TSHHHHHHHH-HCTTSEEEEEEC-HHHHSSCCCC--------SSEEEEECCTTT---CCCCCSEEEE
T ss_pred cCCCEEEEECCC-cCHHHHHHHH-HCCCCeEEEecc-HHHHhhcccC--------CCcEEEeCccCC---CCCCceEEEE
Confidence 466899999999 8999999998 578899999999 7888766541 359999999976 2346999998
Q ss_pred cCcCC-CCHHHHHHHHHHHHhcccc---CcEEEEEe
Q 039591 209 AALVG-MSKEEKMKIIRHIRKYMKD---GGILLVRS 240 (284)
Q Consensus 209 ~~~~~-~~~~~k~~~l~~~~~~L~p---GG~lv~~~ 240 (284)
....+ +..++..++++++.+.|+| ||++++..
T Consensus 258 ~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e 293 (358)
T 1zg3_A 258 KWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIID 293 (358)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEE
T ss_pred cccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 87654 4444556999999999999 99988854
No 254
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.94 E-value=2.5e-09 Score=88.99 Aligned_cols=98 Identities=15% Similarity=0.176 Sum_probs=71.7
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCC---------cEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEE-Ecchhhhhc
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKA---------THFDNFDIDEAANNVARRIVATDFEFEKRMKFL-TGDILQVKE 198 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~---------~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~-~~D~~~~~~ 198 (284)
.++.+|||+||| .|..++.+++ ..+. .+|+++|+|+.+ . . .+++++ .+|+.+...
T Consensus 21 ~~~~~vLDlGcG-~G~~~~~la~-~~~~~~~~~~~~~~~v~~vD~s~~~-----------~-~-~~~~~~~~~d~~~~~~ 85 (196)
T 2nyu_A 21 RPGLRVLDCGAA-PGAWSQVAVQ-KVNAAGTDPSSPVGFVLGVDLLHIF-----------P-L-EGATFLCPADVTDPRT 85 (196)
T ss_dssp CTTCEEEEETCC-SCHHHHHHHH-HTTTTCCCTTSCCCEEEEECSSCCC-----------C-C-TTCEEECSCCTTSHHH
T ss_pred CCCCEEEEeCCC-CCHHHHHHHH-HhccccccccCCCceEEEEechhcc-----------c-C-CCCeEEEeccCCCHHH
Confidence 678899999999 5888889988 3443 799999999831 1 1 468888 898765321
Q ss_pred --------cCCCccEEEEcCcC---CCCHHHH-------HHHHHHHHhccccCcEEEEEec
Q 039591 199 --------KLGEYDCIFLAALV---GMSKEEK-------MKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 199 --------~l~~fD~V~~~~~~---~~~~~~k-------~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
.-+.||+|+++... +....+. ..+++++.+.|||||.+++...
T Consensus 86 ~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 86 SQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp HHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 11479999986532 2222222 4789999999999999998753
No 255
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.93 E-value=3.6e-09 Score=94.44 Aligned_cols=108 Identities=13% Similarity=0.098 Sum_probs=87.4
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcC----CCcEEEEEeCCH--------------------------HHHHHHHHHHhh
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHL----KATHFDNFDIDE--------------------------AANNVARRIVAT 178 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~----~~~~V~~vDis~--------------------------~~~~~A~~~~~~ 178 (284)
..+.+|||+|+. .|.+++++|.... ++.+|+++|..+ ...+.+++++++
T Consensus 105 ~~pg~IlEiGv~-~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~ 183 (282)
T 2wk1_A 105 NVPGDLVETGVW-RGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRN 183 (282)
T ss_dssp TCCCEEEEECCT-TSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHH
T ss_pred CCCCcEEEeecC-chHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHH
Confidence 567899999999 9999999987321 478899999642 147789999988
Q ss_pred ccCC-CCCeEEEEcchhhhhccC--CCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEec
Q 039591 179 DFEF-EKRMKFLTGDILQVKEKL--GEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 179 ~~~l-~~~v~~~~~D~~~~~~~l--~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
.| + .++++++.||+.+....+ ++||+|++++.. + +.-...++.+.+.|+|||++++.+.
T Consensus 184 ~g-l~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~--y-~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 184 YD-LLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL--Y-ESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp TT-CCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS--H-HHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred cC-CCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc--c-ccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 66 5 489999999999876554 679999999864 2 3346789999999999999999874
No 256
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.92 E-value=1.7e-09 Score=95.43 Aligned_cols=129 Identities=20% Similarity=0.199 Sum_probs=87.5
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhc------CCC-----cEEEEEeCCH---HH-----------HHHHHHHHhhc----
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNH------LKA-----THFDNFDIDE---AA-----------NNVARRIVATD---- 179 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~------~~~-----~~V~~vDis~---~~-----------~~~A~~~~~~~---- 179 (284)
.++.+|||||+| +|++++.+++.. .|. .+|+++|.+| +. .+.|+++++.+
T Consensus 59 ~~~~~ILEiGfG-tG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~ 137 (257)
T 2qy6_A 59 HPLFVVAESGFG-TGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPL 137 (257)
T ss_dssp SSEEEEEESCCT-TSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSC
T ss_pred CCCCEEEEECCC-hHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccc
Confidence 455799999999 999999876622 353 5899999987 43 34677776541
Q ss_pred --------cCCCCCeEEEEcchhhhhccC-C----CccEEEEcCcCCC-CHH-HHHHHHHHHHhccccCcEEEEEeccc-
Q 039591 180 --------FEFEKRMKFLTGDILQVKEKL-G----EYDCIFLAALVGM-SKE-EKMKIIRHIRKYMKDGGILLVRSAKG- 243 (284)
Q Consensus 180 --------~~l~~~v~~~~~D~~~~~~~l-~----~fD~V~~~~~~~~-~~~-~k~~~l~~~~~~L~pGG~lv~~~~~g- 243 (284)
..-..+++++.+|+.+....+ + .||+||.+++... .++ -..++++.+++.|+|||+++.-++.+
T Consensus 138 ~g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~tysaa~~ 217 (257)
T 2qy6_A 138 PGCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTSAGF 217 (257)
T ss_dssp SEEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEESCCBHH
T ss_pred cchhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEEEeCCHH
Confidence 100146889999999865554 2 7999999975421 111 02689999999999999999755433
Q ss_pred hhhhcCCCCCCCCCCCcEEEEE
Q 039591 244 ARAFLYPVVERHDLLDFEVLSI 265 (284)
Q Consensus 244 ~~~~lyp~v~~~~l~gf~~~~~ 265 (284)
++.-+ ...||++..+
T Consensus 218 vrr~L-------~~aGF~v~~~ 232 (257)
T 2qy6_A 218 VRRGL-------QEAGFTMQKR 232 (257)
T ss_dssp HHHHH-------HHHTEEEEEE
T ss_pred HHHHH-------HHCCCEEEeC
Confidence 22211 1258887644
No 257
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.92 E-value=6.1e-09 Score=96.16 Aligned_cols=109 Identities=17% Similarity=0.133 Sum_probs=83.9
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccC------CCCCeEEEEcchhhhhcc---
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFE------FEKRMKFLTGDILQVKEK--- 199 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~------l~~~v~~~~~D~~~~~~~--- 199 (284)
.++++||.||.| .|.++..+.+ + +..+|+.+|+||+.++.|++.+..... -+.+++++.+|+.++...
T Consensus 204 ~~pkrVLIIGgG-dG~~~revlk-h-~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~ 280 (381)
T 3c6k_A 204 YTGKDVLILGGG-DGGILCEIVK-L-KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAK 280 (381)
T ss_dssp CTTCEEEEEECT-TCHHHHHHHT-T-CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHH
T ss_pred CCCCeEEEECCC-cHHHHHHHHh-c-CCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhh
Confidence 567999999999 8999988888 4 558999999999999999998643211 125699999999876532
Q ss_pred -CCCccEEEEcCcCC--------CC-HHHHHHHHHHHHhccccCcEEEEEe
Q 039591 200 -LGEYDCIFLAALVG--------MS-KEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 200 -l~~fD~V~~~~~~~--------~~-~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
-++||+|+++..-. .. ..-..++++.+.+.|+|||+++...
T Consensus 281 ~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 281 EGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp HTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 25799999985321 11 1223688999999999999999865
No 258
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.91 E-value=8.5e-10 Score=95.78 Aligned_cols=105 Identities=14% Similarity=0.033 Sum_probs=67.4
Q ss_pred HHhhcc-CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCC-CCCeEEEE-cchhhhhcc
Q 039591 123 LKENGV-VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEF-EKRMKFLT-GDILQVKEK 199 (284)
Q Consensus 123 l~~~~~-~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l-~~~v~~~~-~D~~~~~~~ 199 (284)
+..... ..+.+||||||| +|..+..+++ .+..+|+++|+|+.|++.|+++....... ..++.+.. +|+.
T Consensus 29 L~~~~~~~~g~~VLDiGcG-tG~~t~~la~--~g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~----- 100 (232)
T 3opn_A 29 LKEFHLEINGKTCLDIGSS-TGGFTDVMLQ--NGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFE----- 100 (232)
T ss_dssp HHHTTCCCTTCEEEEETCT-TSHHHHHHHH--TTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCC-----
T ss_pred HHHcCCCCCCCEEEEEccC-CCHHHHHHHh--cCCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcC-----
Confidence 343433 456799999999 8989989988 23359999999999999988764321100 01122222 1111
Q ss_pred CCCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEE
Q 039591 200 LGEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVR 239 (284)
Q Consensus 200 l~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~ 239 (284)
...||.+..+...... ..+++++.+.|||||.+++.
T Consensus 101 ~~~~d~~~~D~v~~~l----~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 101 QGRPSFTSIDVSFISL----DLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp SCCCSEEEECCSSSCG----GGTHHHHHHHSCTTCEEEEE
T ss_pred cCCCCEEEEEEEhhhH----HHHHHHHHHhccCCCEEEEE
Confidence 0125555544333211 67999999999999999885
No 259
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.90 E-value=1.6e-09 Score=95.66 Aligned_cols=79 Identities=18% Similarity=0.161 Sum_probs=65.6
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCH-------HHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC-
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDE-------AANNVARRIVATDFEFEKRMKFLTGDILQVKEKL- 200 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~-------~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l- 200 (284)
.++.+|||+||| .|..++.+|+ .+++|+++|+|+ ++++.|+++.+..+ +..+++|+++|+.+....+
T Consensus 82 ~~~~~VLDlgcG-~G~~a~~lA~---~g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~-~~~ri~~~~~d~~~~l~~~~ 156 (258)
T 2r6z_A 82 TAHPTVWDATAG-LGRDSFVLAS---LGLTVTAFEQHPAVACLLSDGIRRALLNPETQD-TAARINLHFGNAAEQMPALV 156 (258)
T ss_dssp GGCCCEEETTCT-TCHHHHHHHH---TTCCEEEEECCHHHHHHHHHHHHHHHHSHHHHH-HHTTEEEEESCHHHHHHHHH
T ss_pred CCcCeEEEeeCc-cCHHHHHHHH---hCCEEEEEECChhhhHHHHHHHHHHHhHHHhhC-CccCeEEEECCHHHHHHhhh
Confidence 456899999999 9999999998 478999999999 99999999876544 4457999999998754322
Q ss_pred ---CCccEEEEcCcC
Q 039591 201 ---GEYDCIFLAALV 212 (284)
Q Consensus 201 ---~~fD~V~~~~~~ 212 (284)
+.||+|+++...
T Consensus 157 ~~~~~fD~V~~dP~~ 171 (258)
T 2r6z_A 157 KTQGKPDIVYLDPMY 171 (258)
T ss_dssp HHHCCCSEEEECCCC
T ss_pred ccCCCccEEEECCCC
Confidence 579999998654
No 260
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.89 E-value=7.1e-10 Score=91.21 Aligned_cols=91 Identities=16% Similarity=0.257 Sum_probs=71.8
Q ss_pred hccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhc---cCCC
Q 039591 126 NGVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKE---KLGE 202 (284)
Q Consensus 126 ~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~---~l~~ 202 (284)
.+..++.+||+||||. +++|+|+.|++.|++... .+++++++|+.+... ..+.
T Consensus 8 ~g~~~g~~vL~~~~g~------------------v~vD~s~~ml~~a~~~~~------~~~~~~~~d~~~~~~~~~~~~~ 63 (176)
T 2ld4_A 8 FGISAGQFVAVVWDKS------------------SPVEALKGLVDKLQALTG------NEGRVSVENIKQLLQSAHKESS 63 (176)
T ss_dssp TTCCTTSEEEEEECTT------------------SCHHHHHHHHHHHHHHTT------TTSEEEEEEGGGGGGGCCCSSC
T ss_pred cCCCCCCEEEEecCCc------------------eeeeCCHHHHHHHHHhcc------cCcEEEEechhcCccccCCCCC
Confidence 3457899999999992 129999999999998753 248999999987654 3478
Q ss_pred ccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 203 YDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 203 fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
||+|++....++..++...+++++.+.|||||++++..
T Consensus 64 fD~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 101 (176)
T 2ld4_A 64 FDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKE 101 (176)
T ss_dssp EEEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EeEEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEEc
Confidence 99999865443321345889999999999999999954
No 261
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.89 E-value=6e-09 Score=93.90 Aligned_cols=81 Identities=15% Similarity=0.085 Sum_probs=66.7
Q ss_pred ccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhc---cC--C
Q 039591 127 GVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKE---KL--G 201 (284)
Q Consensus 127 ~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~---~l--~ 201 (284)
...++.+|||+||| .|..++.+++ ..++++|+++|+|+.+++.|+++++..+ .+++|+++|+.+... +. .
T Consensus 23 ~~~~g~~vLD~g~G-~G~~s~~la~-~~~~~~VigvD~d~~al~~A~~~~~~~g---~~v~~v~~d~~~l~~~l~~~g~~ 97 (301)
T 1m6y_A 23 KPEDEKIILDCTVG-EGGHSRAILE-HCPGCRIIGIDVDSEVLRIAEEKLKEFS---DRVSLFKVSYREADFLLKTLGIE 97 (301)
T ss_dssp CCCTTCEEEETTCT-TSHHHHHHHH-HCTTCEEEEEESCHHHHHHHHHHTGGGT---TTEEEEECCGGGHHHHHHHTTCS
T ss_pred CCCCCCEEEEEeCC-cCHHHHHHHH-HCCCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEECCHHHHHHHHHhcCCC
Confidence 44678899999999 7888888887 4567899999999999999999987644 689999999877532 11 5
Q ss_pred CccEEEEcCcC
Q 039591 202 EYDCIFLAALV 212 (284)
Q Consensus 202 ~fD~V~~~~~~ 212 (284)
.||.|+++.++
T Consensus 98 ~~D~Vl~D~gv 108 (301)
T 1m6y_A 98 KVDGILMDLGV 108 (301)
T ss_dssp CEEEEEEECSC
T ss_pred CCCEEEEcCcc
Confidence 79999998765
No 262
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.89 E-value=6.3e-10 Score=99.14 Aligned_cols=105 Identities=11% Similarity=0.053 Sum_probs=71.2
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEE--EcchhhhhccCCCccE
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFL--TGDILQVKEKLGEYDC 205 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~--~~D~~~~~~~l~~fD~ 205 (284)
..++.+|||+||| .|..+..+++ . .+|+++|+++ ++..+++........+.+++|+ ++|+.+.. .+.||+
T Consensus 80 ~~~g~~VLDlGcG-tG~~s~~la~-~---~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~ 151 (276)
T 2wa2_A 80 VELKGTVVDLGCG-RGSWSYYAAS-Q---PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME--PFQADT 151 (276)
T ss_dssp CCCCEEEEEESCT-TCHHHHHHHT-S---TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSE
T ss_pred CCCCCEEEEeccC-CCHHHHHHHH-c---CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCE
Confidence 3678899999999 5667788887 2 6899999999 5433322110000011278999 99998743 368999
Q ss_pred EEEcCcC--CCCHHHH---HHHHHHHHhccccCc--EEEEEe
Q 039591 206 IFLAALV--GMSKEEK---MKIIRHIRKYMKDGG--ILLVRS 240 (284)
Q Consensus 206 V~~~~~~--~~~~~~k---~~~l~~~~~~L~pGG--~lv~~~ 240 (284)
|+++... +.+..+. ..+++.+.++||||| .+++..
T Consensus 152 Vvsd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~ 193 (276)
T 2wa2_A 152 VLCDIGESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKV 193 (276)
T ss_dssp EEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEE
T ss_pred EEECCCcCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEe
Confidence 9997541 1111111 247899999999999 888754
No 263
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.88 E-value=1.6e-08 Score=89.85 Aligned_cols=80 Identities=10% Similarity=0.066 Sum_probs=65.4
Q ss_pred hccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhcc-CCCcc
Q 039591 126 NGVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEK-LGEYD 204 (284)
Q Consensus 126 ~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~-l~~fD 204 (284)
....++ +||||||| .|..+..+++ .+.+|+++|+|+.+++.+++++.. .+++++++|+.+...+ +..+|
T Consensus 43 ~~~~~~-~VLEIG~G-~G~lt~~L~~---~~~~V~avEid~~~~~~l~~~~~~-----~~v~vi~~D~l~~~~~~~~~~~ 112 (271)
T 3fut_A 43 ARPFTG-PVFEVGPG-LGALTRALLE---AGAEVTAIEKDLRLRPVLEETLSG-----LPVRLVFQDALLYPWEEVPQGS 112 (271)
T ss_dssp HCCCCS-CEEEECCT-TSHHHHHHHH---TTCCEEEEESCGGGHHHHHHHTTT-----SSEEEEESCGGGSCGGGSCTTE
T ss_pred cCCCCC-eEEEEeCc-hHHHHHHHHH---cCCEEEEEECCHHHHHHHHHhcCC-----CCEEEEECChhhCChhhccCcc
Confidence 344667 99999999 8988889988 458999999999999999998652 5799999999875432 24789
Q ss_pred EEEEcCcCCCC
Q 039591 205 CIFLAALVGMS 215 (284)
Q Consensus 205 ~V~~~~~~~~~ 215 (284)
.|+.+.+....
T Consensus 113 ~iv~NlPy~is 123 (271)
T 3fut_A 113 LLVANLPYHIA 123 (271)
T ss_dssp EEEEEECSSCC
T ss_pred EEEecCccccc
Confidence 99998877665
No 264
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.87 E-value=6.2e-10 Score=98.60 Aligned_cols=106 Identities=15% Similarity=0.073 Sum_probs=71.2
Q ss_pred ccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEE--EcchhhhhccCCCcc
Q 039591 127 GVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFL--TGDILQVKEKLGEYD 204 (284)
Q Consensus 127 ~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~--~~D~~~~~~~l~~fD 204 (284)
...++.+|||+|||| |..+..+++ . .+|+++|+++ ++..+++........+.++.|+ ++|+.+.. .+.||
T Consensus 71 ~~~~g~~VLDlGcGt-G~~s~~la~-~---~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD 142 (265)
T 2oxt_A 71 YVELTGRVVDLGCGR-GGWSYYAAS-R---PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTD 142 (265)
T ss_dssp SCCCCEEEEEESCTT-SHHHHHHHT-S---TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCS
T ss_pred CCCCCCEEEEeCcCC-CHHHHHHHH-c---CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCc
Confidence 346788999999995 666778887 2 7899999999 4333221100000011268999 99998743 36899
Q ss_pred EEEEcCcC--CCCHHHH---HHHHHHHHhccccCc--EEEEEe
Q 039591 205 CIFLAALV--GMSKEEK---MKIIRHIRKYMKDGG--ILLVRS 240 (284)
Q Consensus 205 ~V~~~~~~--~~~~~~k---~~~l~~~~~~L~pGG--~lv~~~ 240 (284)
+|+++... +.+..+. ..+++.+.++|+||| .+++..
T Consensus 143 ~V~sd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv 185 (265)
T 2oxt_A 143 VIMCDVGESSPKWSVESERTIKILELLEKWKVKNPSADFVVKV 185 (265)
T ss_dssp EEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred EEEEeCcccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEe
Confidence 99997541 1111121 248899999999999 888855
No 265
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.85 E-value=1.5e-08 Score=93.44 Aligned_cols=112 Identities=13% Similarity=0.087 Sum_probs=86.5
Q ss_pred ccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccC----CCCCeEEEEcchhhhhccC-C
Q 039591 127 GVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFE----FEKRMKFLTGDILQVKEKL-G 201 (284)
Q Consensus 127 ~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~----l~~~v~~~~~D~~~~~~~l-~ 201 (284)
..+++++|||+++||.|-|+..+ . ...+..|+++|+|+.+++..++++++++. ...++.+...|+....... +
T Consensus 145 ~~~pg~~VLD~CAaPGGKT~~la-~-~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~ 222 (359)
T 4fzv_A 145 GLQPGDIVLDLCAAPGGKTLALL-Q-TGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGD 222 (359)
T ss_dssp CCCTTEEEEESSCTTCHHHHHHH-H-TTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTT
T ss_pred CCCCCCEEEEecCCccHHHHHHH-H-hcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccc
Confidence 45889999999999999876554 4 35667899999999999999999887642 1257899999987654322 6
Q ss_pred CccEEEEcCcCCC-------------C---H-------HHHHHHHHHHHhccccCcEEEEEe
Q 039591 202 EYDCIFLAALVGM-------------S---K-------EEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 202 ~fD~V~~~~~~~~-------------~---~-------~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.||.|++|++..- + . .-..++++++.+.+||||+|++.+
T Consensus 223 ~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsT 284 (359)
T 4fzv_A 223 TYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYST 284 (359)
T ss_dssp CEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEe
Confidence 8999999876411 0 0 123678999999999999999876
No 266
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.85 E-value=5.1e-09 Score=97.75 Aligned_cols=100 Identities=18% Similarity=0.164 Sum_probs=76.9
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++.+|||+||| .|..++.++++..++.+|+|+|+|+.+++.| .+++++++|+.+... .++||+|+.
T Consensus 38 ~~~~~vLD~gcG-tG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a-----------~~~~~~~~D~~~~~~-~~~fD~Ii~ 104 (421)
T 2ih2_A 38 PRGGRVLEPACA-HGPFLRAFREAHGTAYRFVGVEIDPKALDLP-----------PWAEGILADFLLWEP-GEAFDLILG 104 (421)
T ss_dssp CTTCEEEEETCT-TCHHHHHHHHHHCSCSEEEEEESCTTTCCCC-----------TTEEEEESCGGGCCC-SSCEEEEEE
T ss_pred CCCCEEEECCCC-ChHHHHHHHHHhCCCCeEEEEECCHHHHHhC-----------CCCcEEeCChhhcCc-cCCCCEEEE
Confidence 456799999999 8888888887322578999999999998766 368999999986432 268999999
Q ss_pred cCcCCC-----------CHHHHH-----------------HHHHHHHhccccCcEEEEEec
Q 039591 209 AALVGM-----------SKEEKM-----------------KIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 209 ~~~~~~-----------~~~~k~-----------------~~l~~~~~~L~pGG~lv~~~~ 241 (284)
+.+.+. ..+.+. .+++.+.+.|+|||++++...
T Consensus 105 NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p 165 (421)
T 2ih2_A 105 NPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVP 165 (421)
T ss_dssp CCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 865421 122221 678999999999999988664
No 267
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.84 E-value=2.1e-08 Score=87.43 Aligned_cols=94 Identities=20% Similarity=0.240 Sum_probs=67.3
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC-CCccEE
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL-GEYDCI 206 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l-~~fD~V 206 (284)
..++++||||||| .|..+..+++ .+.+|+++|+|+.+++.++++.+. ..+++++++|+.+..... ..| .|
T Consensus 28 ~~~~~~VLDiG~G-~G~lt~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~----~~~v~~~~~D~~~~~~~~~~~~-~v 98 (244)
T 1qam_A 28 LNEHDNIFEIGSG-KGHFTLELVQ---RCNFVTAIEIDHKLCKTTENKLVD----HDNFQVLNKDILQFKFPKNQSY-KI 98 (244)
T ss_dssp CCTTCEEEEECCT-TSHHHHHHHH---HSSEEEEECSCHHHHHHHHHHTTT----CCSEEEECCCGGGCCCCSSCCC-EE
T ss_pred CCCCCEEEEEeCC-chHHHHHHHH---cCCeEEEEECCHHHHHHHHHhhcc----CCCeEEEEChHHhCCcccCCCe-EE
Confidence 3678899999999 8988889988 358999999999999999998754 157999999998754332 234 46
Q ss_pred EEcCcCCCCHHHHHHHHHHHHhccccCc
Q 039591 207 FLAALVGMSKEEKMKIIRHIRKYMKDGG 234 (284)
Q Consensus 207 ~~~~~~~~~~~~k~~~l~~~~~~L~pGG 234 (284)
+.+.+.... ..++.++.++...++
T Consensus 99 v~nlPy~~~----~~~l~~~l~~~~~~~ 122 (244)
T 1qam_A 99 FGNIPYNIS----TDIIRKIVFDSIADE 122 (244)
T ss_dssp EEECCGGGH----HHHHHHHHHSCCCSE
T ss_pred EEeCCcccC----HHHHHHHHhcCCCCe
Confidence 666554322 334455554433333
No 268
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.83 E-value=2.9e-09 Score=93.95 Aligned_cols=81 Identities=10% Similarity=0.161 Sum_probs=64.2
Q ss_pred CCC--CeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhc------cC-CCCCeEEEEcchhhhhcc
Q 039591 129 VQP--KKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATD------FE-FEKRMKFLTGDILQVKEK 199 (284)
Q Consensus 129 ~~~--~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~------~~-l~~~v~~~~~D~~~~~~~ 199 (284)
.++ .+|||+||| +|..++.+|+ .|++|+++|+++.+++.++++++.. ++ +..+++++++|+.+....
T Consensus 85 ~~g~~~~VLDl~~G-~G~dal~lA~---~g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~ 160 (258)
T 2oyr_A 85 KGDYLPDVVDATAG-LGRDAFVLAS---VGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTD 160 (258)
T ss_dssp BTTBCCCEEETTCT-TCHHHHHHHH---HTCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTT
T ss_pred cCCCCCEEEEcCCc-CCHHHHHHHH---cCCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHh
Confidence 556 899999999 9999999998 3678999999999888887776432 11 225799999999986544
Q ss_pred C-CCccEEEEcCcCC
Q 039591 200 L-GEYDCIFLAALVG 213 (284)
Q Consensus 200 l-~~fD~V~~~~~~~ 213 (284)
+ +.||+||++....
T Consensus 161 ~~~~fDvV~lDP~y~ 175 (258)
T 2oyr_A 161 ITPRPQVVYLDPMFP 175 (258)
T ss_dssp CSSCCSEEEECCCCC
T ss_pred CcccCCEEEEcCCCC
Confidence 3 5799999998653
No 269
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.82 E-value=1.5e-08 Score=89.16 Aligned_cols=78 Identities=10% Similarity=0.094 Sum_probs=62.6
Q ss_pred hccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhc-cC---C
Q 039591 126 NGVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKE-KL---G 201 (284)
Q Consensus 126 ~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~-~l---~ 201 (284)
....++++||||||| .|..+..+++ .+.+|+++|+|+.+++.+++++.. ..+++++++|+.+... ++ +
T Consensus 25 ~~~~~~~~VLEIG~G-~G~lt~~La~---~~~~V~avEid~~~~~~~~~~~~~----~~~v~~i~~D~~~~~~~~~~~~~ 96 (255)
T 3tqs_A 25 IHPQKTDTLVEIGPG-RGALTDYLLT---ECDNLALVEIDRDLVAFLQKKYNQ----QKNITIYQNDALQFDFSSVKTDK 96 (255)
T ss_dssp HCCCTTCEEEEECCT-TTTTHHHHTT---TSSEEEEEECCHHHHHHHHHHHTT----CTTEEEEESCTTTCCGGGSCCSS
T ss_pred cCCCCcCEEEEEccc-ccHHHHHHHH---hCCEEEEEECCHHHHHHHHHHHhh----CCCcEEEEcchHhCCHHHhccCC
Confidence 345778899999999 8999999987 458999999999999999998764 2589999999987532 22 4
Q ss_pred CccEEEEcCcC
Q 039591 202 EYDCIFLAALV 212 (284)
Q Consensus 202 ~fD~V~~~~~~ 212 (284)
.|| |+.+.+.
T Consensus 97 ~~~-vv~NlPY 106 (255)
T 3tqs_A 97 PLR-VVGNLPY 106 (255)
T ss_dssp CEE-EEEECCH
T ss_pred CeE-EEecCCc
Confidence 578 6666554
No 270
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.79 E-value=5.3e-09 Score=94.41 Aligned_cols=102 Identities=12% Similarity=0.101 Sum_probs=70.3
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeC----CHHHHHHHHHHHhhccCCCCCeEEEEc-chhhhhccCCC
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDI----DEAANNVARRIVATDFEFEKRMKFLTG-DILQVKEKLGE 202 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDi----s~~~~~~A~~~~~~~~~l~~~v~~~~~-D~~~~~~~l~~ 202 (284)
..++.+|||+|||| |..+..+++ . ++|+++|+ ++.+++.++ .+..+ ..+++|+++ |+.+.. .+.
T Consensus 80 ~~~g~~VLDlGcG~-G~~s~~la~-~---~~V~gvD~~~~~~~~~~~~~~--~~~~~--~~~v~~~~~~D~~~l~--~~~ 148 (305)
T 2p41_A 80 VTPEGKVVDLGCGR-GGWSYYCGG-L---KNVREVKGLTKGGPGHEEPIP--MSTYG--WNLVRLQSGVDVFFIP--PER 148 (305)
T ss_dssp SCCCEEEEEETCTT-SHHHHHHHT-S---TTEEEEEEECCCSTTSCCCCC--CCSTT--GGGEEEECSCCTTTSC--CCC
T ss_pred CCCCCEEEEEcCCC-CHHHHHHHh-c---CCEEEEeccccCchhHHHHHH--hhhcC--CCCeEEEeccccccCC--cCC
Confidence 36778999999995 556778887 2 58999999 554432111 11111 146999999 887643 368
Q ss_pred ccEEEEcCcC--CCCHHHHH---HHHHHHHhccccCcEEEEEe
Q 039591 203 YDCIFLAALV--GMSKEEKM---KIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 203 fD~V~~~~~~--~~~~~~k~---~~l~~~~~~L~pGG~lv~~~ 240 (284)
||+|+++... +....+.. .+++.+.++|||||.+++..
T Consensus 149 fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv 191 (305)
T 2p41_A 149 CDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKV 191 (305)
T ss_dssp CSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred CCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 9999997643 22222222 57888999999999999865
No 271
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.78 E-value=1.8e-08 Score=90.23 Aligned_cols=93 Identities=20% Similarity=0.235 Sum_probs=67.2
Q ss_pred cCCCCeEEEecCCCC------hHHHHHHHhhcCC-CcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEE-EEcchhhhhcc
Q 039591 128 VVQPKKVAFVGSGPM------PLTSIVMAKNHLK-ATHFDNFDIDEAANNVARRIVATDFEFEKRMKF-LTGDILQVKEK 199 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~------G~~ai~la~~~~~-~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~-~~~D~~~~~~~ 199 (284)
..++.+|||+||| . |. ..+++ ..+ +++|+++|+++. + .+++| +++|+.+....
T Consensus 61 l~~g~~VLDLGcG-sg~~~GpGs--~~~a~-~~~~~~~V~gvDis~~--------v-------~~v~~~i~gD~~~~~~~ 121 (290)
T 2xyq_A 61 VPYNMRVIHFGAG-SDKGVAPGT--AVLRQ-WLPTGTLLVDSDLNDF--------V-------SDADSTLIGDCATVHTA 121 (290)
T ss_dssp CCTTCEEEEESCC-CTTSBCHHH--HHHHH-HSCTTCEEEEEESSCC--------B-------CSSSEEEESCGGGCCCS
T ss_pred CCCCCEEEEeCCC-CCCCCCcHH--HHHHH-HcCCCCEEEEEECCCC--------C-------CCCEEEEECccccCCcc
Confidence 3778899999994 3 43 44455 344 689999999998 1 25778 99999864322
Q ss_pred CCCccEEEEcCcCCC----------CHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 200 LGEYDCIFLAALVGM----------SKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 200 l~~fD~V~~~~~~~~----------~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+.||+|+++..... ....-..+++.+.++|||||.+++..
T Consensus 122 -~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~ 171 (290)
T 2xyq_A 122 -NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKI 171 (290)
T ss_dssp -SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 68999999743211 01223589999999999999999854
No 272
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.76 E-value=3.9e-10 Score=98.31 Aligned_cols=103 Identities=17% Similarity=0.196 Sum_probs=73.2
Q ss_pred ccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC-CCccE
Q 039591 127 GVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL-GEYDC 205 (284)
Q Consensus 127 ~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l-~~fD~ 205 (284)
...++.+|||+||| .|..+..+++ .+.+|+++|+|+.+++.|+++.+. ..+++++++|+.+..... +.| .
T Consensus 26 ~~~~~~~VLDiG~G-~G~~~~~l~~---~~~~v~~id~~~~~~~~a~~~~~~----~~~v~~~~~D~~~~~~~~~~~f-~ 96 (245)
T 1yub_A 26 NLKETDTVYEIGTG-KGHLTTKLAK---ISKQVTSIELDSHLFNLSSEKLKL----NTRVTLIHQDILQFQFPNKQRY-K 96 (245)
T ss_dssp CCCSSEEEEECSCC-CSSCSHHHHH---HSSEEEESSSSCSSSSSSSCTTTT----CSEEEECCSCCTTTTCCCSSEE-E
T ss_pred CCCCCCEEEEEeCC-CCHHHHHHHH---hCCeEEEEECCHHHHHHHHHHhcc----CCceEEEECChhhcCcccCCCc-E
Confidence 34677899999999 7888888887 358999999999999999887652 267999999998754332 468 6
Q ss_pred EEEcCcCCCCHHHHHHHH--------------HHHHhccccCcEEEE
Q 039591 206 IFLAALVGMSKEEKMKII--------------RHIRKYMKDGGILLV 238 (284)
Q Consensus 206 V~~~~~~~~~~~~k~~~l--------------~~~~~~L~pGG~lv~ 238 (284)
|+.+.+..........++ +.+.+.|+|||.+.+
T Consensus 97 vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v 143 (245)
T 1yub_A 97 IVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGL 143 (245)
T ss_dssp EEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHH
T ss_pred EEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhh
Confidence 777765544322222232 446666777765544
No 273
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.74 E-value=1.2e-08 Score=96.68 Aligned_cols=111 Identities=14% Similarity=0.094 Sum_probs=82.4
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcC------------CCcEEEEEeCCHHHHHHHHHHHhhccCCCC-CeEEEEcchhh
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHL------------KATHFDNFDIDEAANNVARRIVATDFEFEK-RMKFLTGDILQ 195 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~------------~~~~V~~vDis~~~~~~A~~~~~~~~~l~~-~v~~~~~D~~~ 195 (284)
.++.+|+|.||| +|...+.+++... ++.+++|+|+++.+++.|+.+....| +.. ++++.++|...
T Consensus 170 ~~~~~VlDpacG-sG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g-~~~~~~~i~~gD~l~ 247 (445)
T 2okc_A 170 QMGETVCDPACG-TGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHG-IGTDRSPIVCEDSLE 247 (445)
T ss_dssp CTTCCEEETTCT-TCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTT-CCSSCCSEEECCTTT
T ss_pred CCCCEEeccCCC-cchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhC-CCcCCCCEeeCCCCC
Confidence 567799999999 7777777765210 34679999999999999999876544 322 67899999876
Q ss_pred hhccCCCccEEEEcCcCCCCHH----------------HHHHHHHHHHhccccCcEEEEEecc
Q 039591 196 VKEKLGEYDCIFLAALVGMSKE----------------EKMKIIRHIRKYMKDGGILLVRSAK 242 (284)
Q Consensus 196 ~~~~l~~fD~V~~~~~~~~~~~----------------~k~~~l~~~~~~L~pGG~lv~~~~~ 242 (284)
... .++||+|+.+.+.+.... ....++.++.+.|+|||++++...+
T Consensus 248 ~~~-~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~ 309 (445)
T 2okc_A 248 KEP-STLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPD 309 (445)
T ss_dssp SCC-SSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred Ccc-cCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECC
Confidence 432 258999999976542110 1147899999999999999876643
No 274
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.69 E-value=1e-07 Score=95.27 Aligned_cols=112 Identities=18% Similarity=0.088 Sum_probs=83.3
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhc-----------------------------------------CCCcEEEEEeCCH
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNH-----------------------------------------LKATHFDNFDIDE 166 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~-----------------------------------------~~~~~V~~vDis~ 166 (284)
..++..|+|.+|| +|..++..|... .+..+|+|+|+|+
T Consensus 188 ~~~~~~llDP~CG-SGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~ 266 (703)
T 3v97_A 188 WQPGTPLLDPMCG-SGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDA 266 (703)
T ss_dssp CCTTSCEEETTCT-TSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCH
T ss_pred CCCCCeEEecCCC-CcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCH
Confidence 3677899999999 898888777521 0225799999999
Q ss_pred HHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC--CCccEEEEcCcCCCC---HHHHHHHHHHHHhc---cccCcEEEE
Q 039591 167 AANNVARRIVATDFEFEKRMKFLTGDILQVKEKL--GEYDCIFLAALVGMS---KEEKMKIIRHIRKY---MKDGGILLV 238 (284)
Q Consensus 167 ~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l--~~fD~V~~~~~~~~~---~~~k~~~l~~~~~~---L~pGG~lv~ 238 (284)
.+++.|++|+...| +.+.++|.++|+.+...+. +.||+|+++.+.|.. .++...+++.+.+. +.|||.+.+
T Consensus 267 ~av~~A~~N~~~ag-v~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~i 345 (703)
T 3v97_A 267 RVIQRARTNARLAG-IGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSL 345 (703)
T ss_dssp HHHHHHHHHHHHTT-CGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred HHHHHHHHHHHHcC-CCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCeEEE
Confidence 99999999998755 6677999999998754332 379999999887642 23344555555544 457999887
Q ss_pred Eec
Q 039591 239 RSA 241 (284)
Q Consensus 239 ~~~ 241 (284)
.++
T Consensus 346 lt~ 348 (703)
T 3v97_A 346 FSA 348 (703)
T ss_dssp EES
T ss_pred EeC
Confidence 664
No 275
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.60 E-value=1.3e-07 Score=93.01 Aligned_cols=102 Identities=15% Similarity=0.169 Sum_probs=72.3
Q ss_pred CCeEEEecCCCChHH---HHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEE
Q 039591 131 PKKVAFVGSGPMPLT---SIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIF 207 (284)
Q Consensus 131 ~~~VL~iGsGp~G~~---ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~ 207 (284)
+..|+||||| .|.. ++..+++.....+|++||.++ ++..|++..+. ++++++|+++.+|+.+...+ +++|+|+
T Consensus 358 ~~vVldVGaG-rGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~-N~~~dkVtVI~gd~eev~LP-EKVDIIV 433 (637)
T 4gqb_A 358 VQVLMVLGAG-RGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQF-EEWGSQVTVVSSDMREWVAP-EKADIIV 433 (637)
T ss_dssp EEEEEEESCT-TSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHH-HTTGGGEEEEESCTTTCCCS-SCEEEEE
T ss_pred CcEEEEECCC-CcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHh-ccCCCeEEEEeCcceeccCC-cccCEEE
Confidence 3578999999 6655 333333122233789999998 56678888776 44889999999999986333 7899999
Q ss_pred EcCc--CCCCHHHHHHHHHHHHhccccCcEEE
Q 039591 208 LAAL--VGMSKEEKMKIIRHIRKYMKDGGILL 237 (284)
Q Consensus 208 ~~~~--~~~~~~~k~~~l~~~~~~L~pGG~lv 237 (284)
+.-. .+.+ |--.+++....+.|||||+++
T Consensus 434 SEwMG~fLl~-E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 434 SELLGSFADN-ELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CCCCBTTBGG-GCHHHHHHHHGGGEEEEEEEE
T ss_pred EEcCcccccc-cCCHHHHHHHHHhcCCCcEEc
Confidence 7532 1112 323468888889999999986
No 276
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.60 E-value=2.1e-07 Score=81.44 Aligned_cols=102 Identities=14% Similarity=0.128 Sum_probs=70.6
Q ss_pred hccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhcc-CCCcc
Q 039591 126 NGVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEK-LGEYD 204 (284)
Q Consensus 126 ~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~-l~~fD 204 (284)
....++++||||||| .|..+..+++ .+..+|+++|+|+.+++.++++ . ..+++++++|+.+...+ +....
T Consensus 27 ~~~~~~~~VLDiG~G-~G~lt~~L~~--~~~~~v~avEid~~~~~~~~~~-~-----~~~v~~i~~D~~~~~~~~~~~~~ 97 (249)
T 3ftd_A 27 LNIEEGNTVVEVGGG-TGNLTKVLLQ--HPLKKLYVIELDREMVENLKSI-G-----DERLEVINEDASKFPFCSLGKEL 97 (249)
T ss_dssp TTCCTTCEEEEEESC-HHHHHHHHTT--SCCSEEEEECCCHHHHHHHTTS-C-----CTTEEEECSCTTTCCGGGSCSSE
T ss_pred cCCCCcCEEEEEcCc-hHHHHHHHHH--cCCCeEEEEECCHHHHHHHHhc-c-----CCCeEEEEcchhhCChhHccCCc
Confidence 344678899999999 8999999987 2458999999999999999887 2 25799999999875322 21123
Q ss_pred EEEEcCcCCCCHHHHHHHHHHHHhcc--ccCcEEEEEe
Q 039591 205 CIFLAALVGMSKEEKMKIIRHIRKYM--KDGGILLVRS 240 (284)
Q Consensus 205 ~V~~~~~~~~~~~~k~~~l~~~~~~L--~pGG~lv~~~ 240 (284)
.|+.+.+.... ..++.++.+.. -+.+.+++..
T Consensus 98 ~vv~NlPy~i~----~~il~~ll~~~~~~~~~~~m~Qk 131 (249)
T 3ftd_A 98 KVVGNLPYNVA----SLIIENTVYNKDCVPLAVFMVQK 131 (249)
T ss_dssp EEEEECCTTTH----HHHHHHHHHTGGGCSEEEEEEEH
T ss_pred EEEEECchhcc----HHHHHHHHhcCCCCceEEEEEeH
Confidence 66666655433 34455555433 3445555544
No 277
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.57 E-value=1.5e-07 Score=82.59 Aligned_cols=80 Identities=9% Similarity=0.106 Sum_probs=58.1
Q ss_pred ccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhc-cC----C
Q 039591 127 GVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKE-KL----G 201 (284)
Q Consensus 127 ~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~-~l----~ 201 (284)
...++++||||||| .|..+. +++ .+..+|+++|+|+.+++.++++.+.. .+++++++|+.+... +. +
T Consensus 18 ~~~~~~~VLEIG~G-~G~lt~-l~~--~~~~~v~avEid~~~~~~a~~~~~~~----~~v~~i~~D~~~~~~~~~~~~~~ 89 (252)
T 1qyr_A 18 NPQKGQAMVEIGPG-LAALTE-PVG--ERLDQLTVIELDRDLAARLQTHPFLG----PKLTIYQQDAMTFNFGELAEKMG 89 (252)
T ss_dssp CCCTTCCEEEECCT-TTTTHH-HHH--TTCSCEEEECCCHHHHHHHHTCTTTG----GGEEEECSCGGGCCHHHHHHHHT
T ss_pred CCCCcCEEEEECCC-CcHHHH-hhh--CCCCeEEEEECCHHHHHHHHHHhccC----CceEEEECchhhCCHHHhhcccC
Confidence 44678899999999 777777 654 22223999999999999999886542 479999999987421 11 2
Q ss_pred CccEEEEcCcCCC
Q 039591 202 EYDCIFLAALVGM 214 (284)
Q Consensus 202 ~fD~V~~~~~~~~ 214 (284)
..|.|+.+.+...
T Consensus 90 ~~~~vvsNlPY~i 102 (252)
T 1qyr_A 90 QPLRVFGNLPYNI 102 (252)
T ss_dssp SCEEEEEECCTTT
T ss_pred CceEEEECCCCCc
Confidence 3467787766543
No 278
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.52 E-value=2.7e-07 Score=82.15 Aligned_cols=93 Identities=10% Similarity=0.088 Sum_probs=64.0
Q ss_pred hccCCCCeEEEecCCCChHHHHHHHhhcCC-CcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhcc-C-C-
Q 039591 126 NGVVQPKKVAFVGSGPMPLTSIVMAKNHLK-ATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEK-L-G- 201 (284)
Q Consensus 126 ~~~~~~~~VL~iGsGp~G~~ai~la~~~~~-~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~-l-~- 201 (284)
....++++||||||| .|..+..++++... +++|+++|+|+.+++.++++. . .+++++++|+.+...+ + .
T Consensus 38 ~~~~~~~~VLEIG~G-~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~---~---~~v~~i~~D~~~~~~~~~~~~ 110 (279)
T 3uzu_A 38 IRPERGERMVEIGPG-LGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF---G---ELLELHAGDALTFDFGSIARP 110 (279)
T ss_dssp HCCCTTCEEEEECCT-TSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH---G---GGEEEEESCGGGCCGGGGSCS
T ss_pred cCCCCcCEEEEEccc-cHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc---C---CCcEEEECChhcCChhHhccc
Confidence 345778999999999 88888888872211 244999999999999999983 2 5799999999875322 1 1
Q ss_pred ---CccEEEEcCcCCCCHHHHHHHHHHHHhc
Q 039591 202 ---EYDCIFLAALVGMSKEEKMKIIRHIRKY 229 (284)
Q Consensus 202 ---~fD~V~~~~~~~~~~~~k~~~l~~~~~~ 229 (284)
..+.|+.+.+.... ..++.++...
T Consensus 111 ~~~~~~~vv~NlPY~is----s~il~~ll~~ 137 (279)
T 3uzu_A 111 GDEPSLRIIGNLPYNIS----SPLLFHLMSF 137 (279)
T ss_dssp SSSCCEEEEEECCHHHH----HHHHHHHGGG
T ss_pred ccCCceEEEEccCcccc----HHHHHHHHhc
Confidence 23466666554221 3445455443
No 279
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.50 E-value=4.1e-07 Score=88.23 Aligned_cols=114 Identities=14% Similarity=0.088 Sum_probs=82.3
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcC-----------------CCcEEEEEeCCHHHHHHHHHHHhhccCCCC----Ce
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHL-----------------KATHFDNFDIDEAANNVARRIVATDFEFEK----RM 186 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~-----------------~~~~V~~vDis~~~~~~A~~~~~~~~~l~~----~v 186 (284)
+.++.+|+|.||| +|...+.+++... ...+++|+|+++.+++.|+.++...+ ... ++
T Consensus 167 p~~~~~VlDPaCG-SG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~g-i~~~~~~~~ 244 (541)
T 2ar0_A 167 PQPREVVQDPAAG-TAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHD-IEGNLDHGG 244 (541)
T ss_dssp CCTTCCEEETTCT-TTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTT-CCCBGGGTB
T ss_pred cCCCCeEecCCcc-cchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhC-CCccccccC
Confidence 3567899999999 7766666655211 12479999999999999998876544 322 27
Q ss_pred EEEEcchhhhh-ccCCCccEEEEcCcCCCCH-------------HHHHHHHHHHHhccccCcEEEEEeccc
Q 039591 187 KFLTGDILQVK-EKLGEYDCIFLAALVGMSK-------------EEKMKIIRHIRKYMKDGGILLVRSAKG 243 (284)
Q Consensus 187 ~~~~~D~~~~~-~~l~~fD~V~~~~~~~~~~-------------~~k~~~l~~~~~~L~pGG~lv~~~~~g 243 (284)
.+.++|..... ...++||+|+.+.+.+... ..-..++.++.+.|+|||++++...++
T Consensus 245 ~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~ 315 (541)
T 2ar0_A 245 AIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDN 315 (541)
T ss_dssp SEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHH
T ss_pred CeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecCc
Confidence 88999987543 2347899999998764221 112478999999999999988776443
No 280
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=98.41 E-value=1.6e-06 Score=79.43 Aligned_cols=121 Identities=21% Similarity=0.151 Sum_probs=84.8
Q ss_pred ccccccchhhhhhHHHH-----HHHHhhccCCCCeEEEecCCCChHHHHHHHhhcCCCcE-EEEEeCCHHHHHHHHHHHh
Q 039591 104 NLFPYYGNYVKLASFEC-----RILKENGVVQPKKVAFVGSGPMPLTSIVMAKNHLKATH-FDNFDIDEAANNVARRIVA 177 (284)
Q Consensus 104 ~~fp~~~~y~~l~~~E~-----~~l~~~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~-V~~vDis~~~~~~A~~~~~ 177 (284)
...|. ..+...+-++. ..+.....+++++||.+|+|++|+.++.+|+ . .|++ |+++|.+++..+.++++ .
T Consensus 149 ~~iP~-~s~~~aa~~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~aiqlak-~-~Ga~~Vi~~~~~~~~~~~a~~l-~ 224 (363)
T 3m6i_A 149 HKIGN-MSYENGAMLEPLSVALAGLQRAGVRLGDPVLICGAGPIGLITMLCAK-A-AGACPLVITDIDEGRLKFAKEI-C 224 (363)
T ss_dssp EECTT-CCHHHHHHHHHHHHHHHHHHHHTCCTTCCEEEECCSHHHHHHHHHHH-H-TTCCSEEEEESCHHHHHHHHHH-C
T ss_pred EECCC-CCHHHHHhhhHHHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHH-H-cCCCEEEEECCCHHHHHHHHHh-c
Confidence 33455 45555444432 2333344588999999999999999999999 3 5665 99999999999999987 3
Q ss_pred hccCCCCCeEEEE-----cchhhhhcc---CCCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 178 TDFEFEKRMKFLT-----GDILQVKEK---LGEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 178 ~~~~l~~~v~~~~-----~D~~~~~~~---l~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
. ..+.+.. .|..+...+ -..+|+||.+... ...++.+.+.|++||+++..+
T Consensus 225 ~-----~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~-------~~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 225 P-----EVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGV-------ESSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp T-----TCEEEECCSCCHHHHHHHHHHHTSSCCCSEEEECSCC-------HHHHHHHHHHSCTTCEEEECC
T ss_pred h-----hcccccccccchHHHHHHHHHHhCCCCCCEEEECCCC-------hHHHHHHHHHhcCCCEEEEEc
Confidence 2 2334331 233322211 1479999988764 457888999999999999865
No 281
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.40 E-value=9.5e-07 Score=87.12 Aligned_cols=104 Identities=11% Similarity=0.126 Sum_probs=72.9
Q ss_pred CCeEEEecCCCChHHHH---HHHhhcC---------CCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhc
Q 039591 131 PKKVAFVGSGPMPLTSI---VMAKNHL---------KATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKE 198 (284)
Q Consensus 131 ~~~VL~iGsGp~G~~ai---~la~~~~---------~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~ 198 (284)
+..||||||| .|..+. ..++... ...+|++||.|+.+....++... ++++++|+++.+|+.+...
T Consensus 410 ~~VVldVGaG-tGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~--Ng~~d~VtVI~gd~eev~l 486 (745)
T 3ua3_A 410 TVVIYLLGGG-RGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV--RTWKRRVTIIESDMRSLPG 486 (745)
T ss_dssp EEEEEEESCT-TCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH--HTTTTCSEEEESCGGGHHH
T ss_pred CcEEEEECCC-CCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh--cCCCCeEEEEeCchhhccc
Confidence 4579999999 665542 2222011 23489999999988876666554 3477899999999998754
Q ss_pred c-----CCCccEEEEcCcCCC-CHHHHHHHHHHHHhccccCcEEE
Q 039591 199 K-----LGEYDCIFLAALVGM-SKEEKMKIIRHIRKYMKDGGILL 237 (284)
Q Consensus 199 ~-----l~~fD~V~~~~~~~~-~~~~k~~~l~~~~~~L~pGG~lv 237 (284)
. .+++|+|++.-.-.. ..+--.+.+..+.+.|||||+++
T Consensus 487 p~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 487 IAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred ccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 2 478999998643211 11333568888889999999887
No 282
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=98.39 E-value=6e-07 Score=81.55 Aligned_cols=105 Identities=21% Similarity=0.235 Sum_probs=76.4
Q ss_pred HHHhhccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhcc-C
Q 039591 122 ILKENGVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEK-L 200 (284)
Q Consensus 122 ~l~~~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~-l 200 (284)
.+.....+++++||..|+|++|+.++.+|+ . .|++|+++|.+++..+.++++ | .+.-+.....|..+...+ .
T Consensus 158 ~l~~~~~~~g~~VlV~GaG~vG~~a~qla~-~-~Ga~Vi~~~~~~~~~~~~~~l----G-a~~~i~~~~~~~~~~~~~~~ 230 (340)
T 3s2e_A 158 GLKVTDTRPGQWVVISGIGGLGHVAVQYAR-A-MGLRVAAVDIDDAKLNLARRL----G-AEVAVNARDTDPAAWLQKEI 230 (340)
T ss_dssp HHHTTTCCTTSEEEEECCSTTHHHHHHHHH-H-TTCEEEEEESCHHHHHHHHHT----T-CSEEEETTTSCHHHHHHHHH
T ss_pred HHHHcCCCCCCEEEEECCCHHHHHHHHHHH-H-CCCeEEEEeCCHHHHHHHHHc----C-CCEEEeCCCcCHHHHHHHhC
Confidence 444444578999999999999999999999 3 577999999999999998775 3 111122212233222111 1
Q ss_pred CCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 201 GEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 201 ~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+.+|+|+.+... ...++.+.+.|+|||+++..+
T Consensus 231 g~~d~vid~~g~-------~~~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 231 GGAHGVLVTAVS-------PKAFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp SSEEEEEESSCC-------HHHHHHHHHHEEEEEEEEECS
T ss_pred CCCCEEEEeCCC-------HHHHHHHHHHhccCCEEEEeC
Confidence 579999988764 567889999999999999865
No 283
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=98.37 E-value=1.4e-06 Score=79.75 Aligned_cols=122 Identities=17% Similarity=0.177 Sum_probs=81.2
Q ss_pred cccccchhhhhhHHHH-----HHHHhhccCCCCeEEEecCCCChHHHHHHHhhcCCCc-EEEEEeCCHHHHHHHHHHHhh
Q 039591 105 LFPYYGNYVKLASFEC-----RILKENGVVQPKKVAFVGSGPMPLTSIVMAKNHLKAT-HFDNFDIDEAANNVARRIVAT 178 (284)
Q Consensus 105 ~fp~~~~y~~l~~~E~-----~~l~~~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~-~V~~vDis~~~~~~A~~~~~~ 178 (284)
..|....+...+-++. ..+.....+++++||.+|+|++|+.++.+|+ . .|+ +|+++|.+++..+.++++
T Consensus 141 ~iP~~l~~~~aa~~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~aiqlak-~-~Ga~~Vi~~~~~~~~~~~a~~l--- 215 (356)
T 1pl8_A 141 KLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAK-A-MGAAQVVVTDLSATRLSKAKEI--- 215 (356)
T ss_dssp ECCTTSCHHHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHH-H-TTCSEEEEEESCHHHHHHHHHT---
T ss_pred ECcCCCCHHHHHhhchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHH-H-cCCCEEEEECCCHHHHHHHHHh---
Confidence 3354444444443332 2233334578999999999999999999998 3 466 899999999999988765
Q ss_pred ccCCCCCeEEE---EcchhhhhccC--CCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 179 DFEFEKRMKFL---TGDILQVKEKL--GEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 179 ~~~l~~~v~~~---~~D~~~~~~~l--~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
| .+.-+... ..|..+...+. +.+|+||.+... ...++.+.+.|+|||+++..+
T Consensus 216 -G-a~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~-------~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 216 -G-ADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGA-------EASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp -T-CSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECSCC-------HHHHHHHHHHSCTTCEEEECS
T ss_pred -C-CCEEEcCcccccchHHHHHHHHhCCCCCEEEECCCC-------hHHHHHHHHHhcCCCEEEEEe
Confidence 3 11112211 12222211111 579999988764 456788889999999999765
No 284
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=98.35 E-value=3.8e-07 Score=83.36 Aligned_cols=106 Identities=17% Similarity=0.150 Sum_probs=76.2
Q ss_pred HHHhhccCCCCeEEEecCCCChHHHHHHHhhcCCCc-EEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC
Q 039591 122 ILKENGVVQPKKVAFVGSGPMPLTSIVMAKNHLKAT-HFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL 200 (284)
Q Consensus 122 ~l~~~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~-~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l 200 (284)
.+.....+++++||.+|+|++|+.++.+|+ . .|+ +|+++|.+++..+.++++ | ...-+.....|..+...++
T Consensus 158 al~~~~~~~g~~VlV~GaG~vG~~a~qla~-~-~Ga~~Vi~~~~~~~~~~~~~~l----G-a~~vi~~~~~~~~~~v~~~ 230 (352)
T 3fpc_A 158 GAELANIKLGDTVCVIGIGPVGLMSVAGAN-H-LGAGRIFAVGSRKHCCDIALEY----G-ATDIINYKNGDIVEQILKA 230 (352)
T ss_dssp HHHHTTCCTTCCEEEECCSHHHHHHHHHHH-T-TTCSSEEEECCCHHHHHHHHHH----T-CCEEECGGGSCHHHHHHHH
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHH-H-cCCcEEEEECCCHHHHHHHHHh----C-CceEEcCCCcCHHHHHHHH
Confidence 344444588999999999999999999998 3 566 899999999999999876 3 1111222123333322221
Q ss_pred ---CCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEec
Q 039591 201 ---GEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 201 ---~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
..+|+||.+... ...++.+.+.|+|||+++..+.
T Consensus 231 t~g~g~D~v~d~~g~-------~~~~~~~~~~l~~~G~~v~~G~ 267 (352)
T 3fpc_A 231 TDGKGVDKVVIAGGD-------VHTFAQAVKMIKPGSDIGNVNY 267 (352)
T ss_dssp TTTCCEEEEEECSSC-------TTHHHHHHHHEEEEEEEEECCC
T ss_pred cCCCCCCEEEECCCC-------hHHHHHHHHHHhcCCEEEEecc
Confidence 369999987654 3578889999999999998763
No 285
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=98.34 E-value=8.8e-07 Score=81.64 Aligned_cols=104 Identities=17% Similarity=0.276 Sum_probs=77.2
Q ss_pred HHhhccCCCCeEEEecCCCChHHHHHHHhhcCCCc-EEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhcc--
Q 039591 123 LKENGVVQPKKVAFVGSGPMPLTSIVMAKNHLKAT-HFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEK-- 199 (284)
Q Consensus 123 l~~~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~-~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~-- 199 (284)
+.....+++++||.+|+|++|..++.+|+ . .|+ +|+++|.+++..+.++++ | ....+.+...|..+...+
T Consensus 175 l~~~~~~~g~~VlV~GaG~vG~~aiqlak-~-~Ga~~Vi~~~~~~~~~~~a~~l----G-a~~vi~~~~~~~~~~i~~~~ 247 (370)
T 4ej6_A 175 VDLSGIKAGSTVAILGGGVIGLLTVQLAR-L-AGATTVILSTRQATKRRLAEEV----G-ATATVDPSAGDVVEAIAGPV 247 (370)
T ss_dssp HHHHTCCTTCEEEEECCSHHHHHHHHHHH-H-TTCSEEEEECSCHHHHHHHHHH----T-CSEEECTTSSCHHHHHHSTT
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHH-H-cCCCEEEEECCCHHHHHHHHHc----C-CCEEECCCCcCHHHHHHhhh
Confidence 33344588999999999999999999998 3 456 899999999999998876 3 111222223444333222
Q ss_pred -C--CCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 200 -L--GEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 200 -l--~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+ +++|+||.+... ...++.+.+.|++||++++.+
T Consensus 248 ~~~~gg~Dvvid~~G~-------~~~~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 248 GLVPGGVDVVIECAGV-------AETVKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp SSSTTCEEEEEECSCC-------HHHHHHHHHHEEEEEEEEECS
T ss_pred hccCCCCCEEEECCCC-------HHHHHHHHHHhccCCEEEEEe
Confidence 2 479999988764 467888999999999999865
No 286
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=98.34 E-value=2e-06 Score=78.09 Aligned_cols=123 Identities=17% Similarity=0.185 Sum_probs=86.5
Q ss_pred cccccchhhhhhHHHH------HHHHhhccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhh
Q 039591 105 LFPYYGNYVKLASFEC------RILKENGVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVAT 178 (284)
Q Consensus 105 ~fp~~~~y~~l~~~E~------~~l~~~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~ 178 (284)
..|....+....-+.. ..+.....+++++||.+|+|+.|..++.+++ ...+.+|+++|.+++..+.++++-.
T Consensus 132 ~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~~g~~a~~~a~-~~~g~~Vi~~~~~~~r~~~~~~~Ga- 209 (348)
T 4eez_A 132 KVPDGLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAK-NVFGAKVIAVDINQDKLNLAKKIGA- 209 (348)
T ss_dssp BCCTTSCHHHHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHH-HTSCCEEEEEESCHHHHHHHHHTTC-
T ss_pred ecCCCCCHHHHhhcccceeeEEeeecccCCCCCCEEEEEcCCCccHHHHHHHH-HhCCCEEEEEECcHHHhhhhhhcCC-
Confidence 3354444444443332 2333444588999999999999999988887 5678999999999999988887632
Q ss_pred ccCCCCCeEEEEcchhhhhccC---CCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 179 DFEFEKRMKFLTGDILQVKEKL---GEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 179 ~~~l~~~v~~~~~D~~~~~~~l---~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
..-+.....|..+...++ ..+|.++.+... ...+....+.+++||++++..
T Consensus 210 ----~~~i~~~~~~~~~~v~~~t~g~g~d~~~~~~~~-------~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 210 ----DVTINSGDVNPVDEIKKITGGLGVQSAIVCAVA-------RIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp ----SEEEEC-CCCHHHHHHHHTTSSCEEEEEECCSC-------HHHHHHHHHTEEEEEEEEECC
T ss_pred ----eEEEeCCCCCHHHHhhhhcCCCCceEEEEeccC-------cchhheeheeecCCceEEEEe
Confidence 233455555554433222 468888888765 567888899999999998765
No 287
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.33 E-value=6.3e-07 Score=86.93 Aligned_cols=111 Identities=11% Similarity=-0.028 Sum_probs=78.0
Q ss_pred CCeEEEecCCCChHHHHHHHhhcC--------------CCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhh
Q 039591 131 PKKVAFVGSGPMPLTSIVMAKNHL--------------KATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQV 196 (284)
Q Consensus 131 ~~~VL~iGsGp~G~~ai~la~~~~--------------~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~ 196 (284)
+.+|+|.+|| +|...+.+++... ...+++|+|+++.++++|+.++...| +..++.+.++|....
T Consensus 245 ~~~VlDPaCG-SG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~g-i~~~i~i~~gDtL~~ 322 (544)
T 3khk_A 245 KGRVYDPAMG-SGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRG-IDFNFGKKNADSFLD 322 (544)
T ss_dssp SEEEEESSCT-TCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTT-CCCBCCSSSCCTTTS
T ss_pred CCeEeCcccC-cCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhC-CCcccceeccchhcC
Confidence 3499999999 7765555543110 14689999999999999999876544 445555588997653
Q ss_pred hc-cCCCccEEEEcCcCCCC--HH--------------------------HHHHHHHHHHhccccCcEEEEEeccc
Q 039591 197 KE-KLGEYDCIFLAALVGMS--KE--------------------------EKMKIIRHIRKYMKDGGILLVRSAKG 243 (284)
Q Consensus 197 ~~-~l~~fD~V~~~~~~~~~--~~--------------------------~k~~~l~~~~~~L~pGG~lv~~~~~g 243 (284)
.. ...+||+|+.+.+.+.. .. .-..++.++.+.|+|||++++...+|
T Consensus 323 ~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g 398 (544)
T 3khk_A 323 DQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANG 398 (544)
T ss_dssp CSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETH
T ss_pred cccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecch
Confidence 21 12689999999876531 00 01268999999999999987765433
No 288
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=98.32 E-value=2.5e-06 Score=77.45 Aligned_cols=124 Identities=17% Similarity=0.063 Sum_probs=85.2
Q ss_pred ccccccchhhhhhHHHHH-----HHHhhccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhh
Q 039591 104 NLFPYYGNYVKLASFECR-----ILKENGVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVAT 178 (284)
Q Consensus 104 ~~fp~~~~y~~l~~~E~~-----~l~~~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~ 178 (284)
...|..-.+...+-++.- .+......++++||..|+|+.|..++.+|+ ......++++|.+++..+.|+++
T Consensus 129 ~~iP~~l~~~~aa~l~~~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak-~~G~~~vi~~~~~~~k~~~a~~l--- 204 (346)
T 4a2c_A 129 FALPTDMPIEDGAFIEPITVGLHAFHLAQGCENKNVIIIGAGTIGLLAIQCAV-ALGAKSVTAIDISSEKLALAKSF--- 204 (346)
T ss_dssp EECCTTSCGGGGGGHHHHHHHHHHHHHTTCCTTSEEEEECCSHHHHHHHHHHH-HTTCSEEEEEESCHHHHHHHHHT---
T ss_pred EECCCCCCHHHHHhchHHHHHHHHHHHhccCCCCEEEEECCCCcchHHHHHHH-HcCCcEEEEEechHHHHHHHHHc---
Confidence 334544445554444431 222333478999999999999999999998 45556789999999999998876
Q ss_pred ccCCCCCeEEEEcchhhhh---ccCCCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 179 DFEFEKRMKFLTGDILQVK---EKLGEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 179 ~~~l~~~v~~~~~D~~~~~---~~l~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
| ....+.+...|..+.. .+...+|+|+.+... ...++.+.+.+++||++++..
T Consensus 205 -G-a~~~i~~~~~~~~~~~~~~~~~~g~d~v~d~~G~-------~~~~~~~~~~l~~~G~~v~~g 260 (346)
T 4a2c_A 205 -G-AMQTFNSSEMSAPQMQSVLRELRFNQLILETAGV-------PQTVELAVEIAGPHAQLALVG 260 (346)
T ss_dssp -T-CSEEEETTTSCHHHHHHHHGGGCSSEEEEECSCS-------HHHHHHHHHHCCTTCEEEECC
T ss_pred -C-CeEEEeCCCCCHHHHHHhhcccCCcccccccccc-------cchhhhhhheecCCeEEEEEe
Confidence 3 1222333333433322 223679999988765 567888999999999999865
No 289
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.30 E-value=1.5e-06 Score=84.28 Aligned_cols=113 Identities=12% Similarity=0.123 Sum_probs=82.4
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhc--CCCcEEEEEeCCHHHHHHHHHHHhhccCCC-CCeEEEEcchhhh--h-ccCCC
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNH--LKATHFDNFDIDEAANNVARRIVATDFEFE-KRMKFLTGDILQV--K-EKLGE 202 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~--~~~~~V~~vDis~~~~~~A~~~~~~~~~l~-~~v~~~~~D~~~~--~-~~l~~ 202 (284)
.++.+|+|.+|| +|...+.+++.. .+..+++|+|+++.++.+|+.+....| .. .++.+.++|.... + ....+
T Consensus 220 ~~~~~VlDPaCG-SG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~g-i~~~~~~I~~gDtL~~d~p~~~~~~ 297 (542)
T 3lkd_A 220 KQGFTLYDATMG-SGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHG-VPIENQFLHNADTLDEDWPTQEPTN 297 (542)
T ss_dssp CTTCEEEETTCT-TSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTT-CCGGGEEEEESCTTTSCSCCSSCCC
T ss_pred CCCCEEeecccc-hhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcC-CCcCccceEecceeccccccccccc
Confidence 467899999999 776666666522 235789999999999999999876544 33 4689999998764 2 12368
Q ss_pred ccEEEEcCcCCCCH-------HH---------------HHHHHHHHHhccc-cCcEEEEEeccc
Q 039591 203 YDCIFLAALVGMSK-------EE---------------KMKIIRHIRKYMK-DGGILLVRSAKG 243 (284)
Q Consensus 203 fD~V~~~~~~~~~~-------~~---------------k~~~l~~~~~~L~-pGG~lv~~~~~g 243 (284)
||+|+.+.+.+... .+ -..++.++.+.|+ |||++.+...+|
T Consensus 298 fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g 361 (542)
T 3lkd_A 298 FDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHG 361 (542)
T ss_dssp BSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETH
T ss_pred ccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecch
Confidence 99999997653210 00 1248999999999 999997766444
No 290
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=98.28 E-value=1.6e-06 Score=78.84 Aligned_cols=107 Identities=13% Similarity=0.125 Sum_probs=78.3
Q ss_pred HHHHhh--ccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhc
Q 039591 121 RILKEN--GVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKE 198 (284)
Q Consensus 121 ~~l~~~--~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~ 198 (284)
..+.+. ...++++||.+|+|++|+.++.+|+ ...+.+|+++|.+++..+.++++ | ...-+.. ..|..+...
T Consensus 160 ~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~-~~g~~~Vi~~~~~~~~~~~~~~l----G-a~~~i~~-~~~~~~~v~ 232 (345)
T 3jv7_A 160 HAISRVLPLLGPGSTAVVIGVGGLGHVGIQILR-AVSAARVIAVDLDDDRLALAREV----G-ADAAVKS-GAGAADAIR 232 (345)
T ss_dssp HHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHH-HHCCCEEEEEESCHHHHHHHHHT----T-CSEEEEC-STTHHHHHH
T ss_pred HHHHHhccCCCCCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEEcCCHHHHHHHHHc----C-CCEEEcC-CCcHHHHHH
Confidence 344443 3478999999999999999999998 45578999999999999998875 3 1111221 123322222
Q ss_pred cC---CCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEec
Q 039591 199 KL---GEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 199 ~l---~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
++ ..+|+||.+... ...++.+.+.|++||+++..+.
T Consensus 233 ~~t~g~g~d~v~d~~G~-------~~~~~~~~~~l~~~G~iv~~G~ 271 (345)
T 3jv7_A 233 ELTGGQGATAVFDFVGA-------QSTIDTAQQVVAVDGHISVVGI 271 (345)
T ss_dssp HHHGGGCEEEEEESSCC-------HHHHHHHHHHEEEEEEEEECSC
T ss_pred HHhCCCCCeEEEECCCC-------HHHHHHHHHHHhcCCEEEEECC
Confidence 22 379999988765 4688899999999999998763
No 291
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=98.28 E-value=1.3e-06 Score=79.56 Aligned_cols=101 Identities=9% Similarity=0.043 Sum_probs=72.6
Q ss_pred ccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEE-cchhhhhccCCCccE
Q 039591 127 GVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLT-GDILQVKEKLGEYDC 205 (284)
Q Consensus 127 ~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~-~D~~~~~~~l~~fD~ 205 (284)
.. ++++||.+|+|++|+.++.+|+..++|++|+++|.+++..+.++++ | .+.-+.... .|..+....-..+|+
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~l----G-a~~vi~~~~~~~~~~~~~~g~g~D~ 241 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALEL----G-ADYVSEMKDAESLINKLTDGLGASI 241 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHH----T-CSEEECHHHHHHHHHHHHTTCCEEE
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHh----C-CCEEeccccchHHHHHhhcCCCccE
Confidence 45 8899999999999999999998433378999999999999998875 3 111111111 222111111137999
Q ss_pred EEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 206 IFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 206 V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
||.+... ...++.+.+.|+|||+++..+
T Consensus 242 vid~~g~-------~~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 242 AIDLVGT-------EETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp EEESSCC-------HHHHHHHHHHEEEEEEEEECC
T ss_pred EEECCCC-------hHHHHHHHHHhhcCCEEEEeC
Confidence 9988764 457888899999999998765
No 292
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.27 E-value=2.1e-06 Score=85.88 Aligned_cols=112 Identities=8% Similarity=0.055 Sum_probs=77.3
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCC---CcEEEEEeCCHHHHHHH--HHHHhhc---cCCCCCeEEEEcchhhhh-cc
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLK---ATHFDNFDIDEAANNVA--RRIVATD---FEFEKRMKFLTGDILQVK-EK 199 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~---~~~V~~vDis~~~~~~A--~~~~~~~---~~l~~~v~~~~~D~~~~~-~~ 199 (284)
.++.+|+|.||| +|...+.+++ ..+ ..+++|+|+|+.+++.| +.+.... .+. ....+...|..+.. ..
T Consensus 320 ~~g~rVLDPaCG-SG~FLIaaA~-~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi-~~~~I~~dD~L~~~~~~ 396 (878)
T 3s1s_A 320 TEDEVISDPAAG-SGNLLATVSA-GFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSN-NAPTITGEDVCSLNPED 396 (878)
T ss_dssp CTTCEEEETTCT-TSHHHHHHHH-TSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTT-BCCEEECCCGGGCCGGG
T ss_pred CCCCEEEECCCC-ccHHHHHHHH-HhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCC-CcceEEecchhcccccc
Confidence 357899999999 8888888877 333 36799999999999999 5554320 111 22356667766521 12
Q ss_pred CCCccEEEEcCcCCC---CHHH-------------------------HHHHHHHHHhccccCcEEEEEeccc
Q 039591 200 LGEYDCIFLAALVGM---SKEE-------------------------KMKIIRHIRKYMKDGGILLVRSAKG 243 (284)
Q Consensus 200 l~~fD~V~~~~~~~~---~~~~-------------------------k~~~l~~~~~~L~pGG~lv~~~~~g 243 (284)
.++||+|+.+.+.+. .... -..+++++.+.|+|||++++...++
T Consensus 397 ~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s 468 (878)
T 3s1s_A 397 FANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQ 468 (878)
T ss_dssp GTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETH
T ss_pred cCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChH
Confidence 378999999987732 1111 1236788999999999998766433
No 293
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=98.27 E-value=1.1e-06 Score=80.69 Aligned_cols=100 Identities=16% Similarity=0.136 Sum_probs=73.1
Q ss_pred ccCCCCeEEEecCCCChHHHHHHHhhcCCCc-EEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC--CCc
Q 039591 127 GVVQPKKVAFVGSGPMPLTSIVMAKNHLKAT-HFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL--GEY 203 (284)
Q Consensus 127 ~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~-~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l--~~f 203 (284)
..+++++||.+|+|++|+.++.+|+ . .|+ +|+++|.+++..+.++++ | ....+.....|..+...++ +.+
T Consensus 187 ~~~~g~~VlV~GaG~vG~~a~qlak-~-~Ga~~Vi~~~~~~~~~~~a~~l----G-a~~vi~~~~~~~~~~~~~~~~gg~ 259 (371)
T 1f8f_A 187 KVTPASSFVTWGAGAVGLSALLAAK-V-CGASIIIAVDIVESRLELAKQL----G-ATHVINSKTQDPVAAIKEITDGGV 259 (371)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHH-H-HTCSEEEEEESCHHHHHHHHHH----T-CSEEEETTTSCHHHHHHHHTTSCE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHH-H-cCCCeEEEECCCHHHHHHHHHc----C-CCEEecCCccCHHHHHHHhcCCCC
Confidence 3478899999999999999999998 3 456 799999999999999876 3 1111221122332222111 379
Q ss_pred cEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 204 DCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 204 D~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|+||.+... ...++.+.+.|++||+++..+
T Consensus 260 D~vid~~g~-------~~~~~~~~~~l~~~G~iv~~G 289 (371)
T 1f8f_A 260 NFALESTGS-------PEILKQGVDALGILGKIAVVG 289 (371)
T ss_dssp EEEEECSCC-------HHHHHHHHHTEEEEEEEEECC
T ss_pred cEEEECCCC-------HHHHHHHHHHHhcCCEEEEeC
Confidence 999988764 467888999999999999865
No 294
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=98.21 E-value=6.7e-06 Score=74.98 Aligned_cols=101 Identities=17% Similarity=0.084 Sum_probs=72.7
Q ss_pred hccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEE-cchhhhhcc-----
Q 039591 126 NGVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLT-GDILQVKEK----- 199 (284)
Q Consensus 126 ~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~-~D~~~~~~~----- 199 (284)
...+++++||.+|+|++|+.++.+|+ . .|++|+++|.+++..+.++++ | .+..+.... .|..+...+
T Consensus 164 ~~~~~g~~VlV~GaG~vG~~a~qla~-~-~Ga~Vi~~~~~~~~~~~~~~l----G-a~~~~~~~~~~~~~~~i~~~~~~~ 236 (352)
T 1e3j_A 164 AGVQLGTTVLVIGAGPIGLVSVLAAK-A-YGAFVVCTARSPRRLEVAKNC----G-ADVTLVVDPAKEEESSIIERIRSA 236 (352)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHH-H-TTCEEEEEESCHHHHHHHHHT----T-CSEEEECCTTTSCHHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHH-H-cCCEEEEEcCCHHHHHHHHHh----C-CCEEEcCcccccHHHHHHHHhccc
Confidence 34578999999999999999999998 3 577899999999999998764 3 111122111 222221111
Q ss_pred -CCCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 200 -LGEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 200 -l~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
-+.+|+||.+... ...++.+.+.|++||+++..+
T Consensus 237 ~g~g~D~vid~~g~-------~~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 237 IGDLPNVTIDCSGN-------EKCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp SSSCCSEEEECSCC-------HHHHHHHHHHSCTTCEEEECS
T ss_pred cCCCCCEEEECCCC-------HHHHHHHHHHHhcCCEEEEEe
Confidence 1469999988764 456788889999999999865
No 295
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=98.16 E-value=3.3e-06 Score=76.73 Aligned_cols=105 Identities=17% Similarity=0.203 Sum_probs=74.3
Q ss_pred HHHhhccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC-
Q 039591 122 ILKENGVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL- 200 (284)
Q Consensus 122 ~l~~~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l- 200 (284)
.+.+....++++||.+|+|++|..++.+++ . .|++|+++|.+++..+.++++ | ....+.+...|..+...+.
T Consensus 156 ~l~~~~~~~g~~VlV~GaG~vG~~~~~~a~-~-~Ga~Vi~~~~~~~~~~~~~~l----G-a~~~~d~~~~~~~~~~~~~~ 228 (339)
T 1rjw_A 156 ALKVTGAKPGEWVAIYGIGGLGHVAVQYAK-A-MGLNVVAVDIGDEKLELAKEL----G-ADLVVNPLKEDAAKFMKEKV 228 (339)
T ss_dssp HHHHHTCCTTCEEEEECCSTTHHHHHHHHH-H-TTCEEEEECSCHHHHHHHHHT----T-CSEEECTTTSCHHHHHHHHH
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHH-H-cCCEEEEEeCCHHHHHHHHHC----C-CCEEecCCCccHHHHHHHHh
Confidence 334444578899999999999999999998 3 578999999999999988764 3 1111111112222211111
Q ss_pred CCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 201 GEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 201 ~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+.+|+||.+... ...++.+.+.|++||+++..+
T Consensus 229 ~~~d~vid~~g~-------~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 229 GGVHAAVVTAVS-------KPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp SSEEEEEESSCC-------HHHHHHHHHHEEEEEEEEECC
T ss_pred CCCCEEEECCCC-------HHHHHHHHHHhhcCCEEEEec
Confidence 579999988764 457788899999999998765
No 296
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.14 E-value=9.1e-06 Score=72.05 Aligned_cols=77 Identities=16% Similarity=0.066 Sum_probs=62.2
Q ss_pred hccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhc---cC--
Q 039591 126 NGVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKE---KL-- 200 (284)
Q Consensus 126 ~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~---~l-- 200 (284)
+...++..++|.+|| .|-.+..+++ . +++|+|+|.||++++.|++ ++. .+++++++|..++.. ..
T Consensus 18 L~~~~gg~~VD~T~G-~GGHS~~il~-~--~g~VigiD~Dp~Ai~~A~~-L~~-----~rv~lv~~~f~~l~~~L~~~g~ 87 (285)
T 1wg8_A 18 LAVRPGGVYVDATLG-GAGHARGILE-R--GGRVIGLDQDPEAVARAKG-LHL-----PGLTVVQGNFRHLKRHLAALGV 87 (285)
T ss_dssp HTCCTTCEEEETTCT-TSHHHHHHHH-T--TCEEEEEESCHHHHHHHHH-TCC-----TTEEEEESCGGGHHHHHHHTTC
T ss_pred hCCCCCCEEEEeCCC-CcHHHHHHHH-C--CCEEEEEeCCHHHHHHHHh-hcc-----CCEEEEECCcchHHHHHHHcCC
Confidence 345778899999999 7888888888 2 7899999999999999998 543 589999999987632 22
Q ss_pred CCccEEEEcCcC
Q 039591 201 GEYDCIFLAALV 212 (284)
Q Consensus 201 ~~fD~V~~~~~~ 212 (284)
+++|.|+.+.++
T Consensus 88 ~~vDgIL~DLGv 99 (285)
T 1wg8_A 88 ERVDGILADLGV 99 (285)
T ss_dssp SCEEEEEEECSC
T ss_pred CCcCEEEeCCcc
Confidence 579999987554
No 297
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=98.14 E-value=1.8e-06 Score=79.66 Aligned_cols=100 Identities=21% Similarity=0.219 Sum_probs=73.0
Q ss_pred ccCCCCeEEEecCCCChHHHHHHHhhcCCCc-EEEEEeCCHHHHHHHHHHHhhccCCCCCeEEE--EcchhhhhccC--C
Q 039591 127 GVVQPKKVAFVGSGPMPLTSIVMAKNHLKAT-HFDNFDIDEAANNVARRIVATDFEFEKRMKFL--TGDILQVKEKL--G 201 (284)
Q Consensus 127 ~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~-~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~--~~D~~~~~~~l--~ 201 (284)
..+++++||.+|+|++|+.++.+|+ . .|+ +|+++|.+++.++.|+++ | ...-+... ..|+.+...++ +
T Consensus 190 ~~~~g~~VlV~GaG~vG~~a~q~a~-~-~Ga~~Vi~~~~~~~~~~~a~~l----G-a~~vi~~~~~~~~~~~~i~~~~~g 262 (378)
T 3uko_A 190 KVEPGSNVAIFGLGTVGLAVAEGAK-T-AGASRIIGIDIDSKKYETAKKF----G-VNEFVNPKDHDKPIQEVIVDLTDG 262 (378)
T ss_dssp CCCTTCCEEEECCSHHHHHHHHHHH-H-HTCSCEEEECSCTTHHHHHHTT----T-CCEEECGGGCSSCHHHHHHHHTTS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHH-H-cCCCeEEEEcCCHHHHHHHHHc----C-CcEEEccccCchhHHHHHHHhcCC
Confidence 3478999999999999999999998 3 455 899999999999988765 3 11111111 12232222221 4
Q ss_pred CccEEEEcCcCCCCHHHHHHHHHHHHhccccC-cEEEEEe
Q 039591 202 EYDCIFLAALVGMSKEEKMKIIRHIRKYMKDG-GILLVRS 240 (284)
Q Consensus 202 ~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pG-G~lv~~~ 240 (284)
.+|+||.+... ...++.+.+.|++| |+++..+
T Consensus 263 g~D~vid~~g~-------~~~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 263 GVDYSFECIGN-------VSVMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp CBSEEEECSCC-------HHHHHHHHHTBCTTTCEEEECS
T ss_pred CCCEEEECCCC-------HHHHHHHHHHhhccCCEEEEEc
Confidence 79999988765 56788999999997 9998866
No 298
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=98.13 E-value=1.8e-06 Score=79.63 Aligned_cols=102 Identities=19% Similarity=0.224 Sum_probs=73.0
Q ss_pred HHHhhccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC-
Q 039591 122 ILKENGVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL- 200 (284)
Q Consensus 122 ~l~~~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l- 200 (284)
.+.+...+++++||.+|+|++|+.++.+|+ . .|++|+++|.+++..+.++++ | ...-+.....|.. ..+
T Consensus 186 al~~~~~~~g~~VlV~GaG~vG~~aiqlak-~-~Ga~Vi~~~~~~~~~~~a~~l----G-a~~vi~~~~~~~~---~~~~ 255 (369)
T 1uuf_A 186 PLRHWQAGPGKKVGVVGIGGLGHMGIKLAH-A-MGAHVVAFTTSEAKREAAKAL----G-ADEVVNSRNADEM---AAHL 255 (369)
T ss_dssp HHHHTTCCTTCEEEEECCSHHHHHHHHHHH-H-TTCEEEEEESSGGGHHHHHHH----T-CSEEEETTCHHHH---HTTT
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHH-H-CCCEEEEEeCCHHHHHHHHHc----C-CcEEeccccHHHH---HHhh
Confidence 344444578999999999999999999998 3 578899999999999998874 3 1111111111211 122
Q ss_pred CCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 201 GEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 201 ~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+.+|+||.+.... ..++.+.+.|++||+++..+
T Consensus 256 ~g~Dvvid~~g~~-------~~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 256 KSFDFILNTVAAP-------HNLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp TCEEEEEECCSSC-------CCHHHHHTTEEEEEEEEECC
T ss_pred cCCCEEEECCCCH-------HHHHHHHHHhccCCEEEEec
Confidence 6899999886542 34667889999999998765
No 299
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=98.12 E-value=3.4e-06 Score=77.49 Aligned_cols=97 Identities=10% Similarity=0.105 Sum_probs=71.9
Q ss_pred CCCeEEEec-CCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC--CCccEE
Q 039591 130 QPKKVAFVG-SGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL--GEYDCI 206 (284)
Q Consensus 130 ~~~~VL~iG-sGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l--~~fD~V 206 (284)
++++||.+| +|++|..++.+|+ ...+++|+++|.+++..+.++++ | .+.-+.. ..|..+...++ +.+|+|
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak-~~~g~~Vi~~~~~~~~~~~~~~l----G-ad~vi~~-~~~~~~~v~~~~~~g~Dvv 243 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIAR-QRTDLTVIATASRPETQEWVKSL----G-AHHVIDH-SKPLAAEVAALGLGAPAFV 243 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHH-HHCCSEEEEECSSHHHHHHHHHT----T-CSEEECT-TSCHHHHHHTTCSCCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-HhcCCEEEEEeCCHHHHHHHHHc----C-CCEEEeC-CCCHHHHHHHhcCCCceEE
Confidence 678999999 9999999999998 44688999999999999998774 3 1111111 12333222222 579999
Q ss_pred EEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 207 FLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 207 ~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|.+... ...++.+.+.|++||+++...
T Consensus 244 id~~g~-------~~~~~~~~~~l~~~G~iv~~g 270 (363)
T 4dvj_A 244 FSTTHT-------DKHAAEIADLIAPQGRFCLID 270 (363)
T ss_dssp EECSCH-------HHHHHHHHHHSCTTCEEEECS
T ss_pred EECCCc-------hhhHHHHHHHhcCCCEEEEEC
Confidence 987664 467888999999999998763
No 300
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=98.11 E-value=3.5e-06 Score=76.75 Aligned_cols=100 Identities=20% Similarity=0.147 Sum_probs=74.6
Q ss_pred HHHHhhccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC
Q 039591 121 RILKENGVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL 200 (284)
Q Consensus 121 ~~l~~~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l 200 (284)
..+.+...+++++||.+|+|++|+.++.+|+ . .|++|+++|.+++..+.++++ | . +. .+ .|..+. .
T Consensus 167 ~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~-~-~Ga~Vi~~~~~~~~~~~~~~l----G-a-~~-v~--~~~~~~-~-- 232 (348)
T 3two_A 167 SPLKFSKVTKGTKVGVAGFGGLGSMAVKYAV-A-MGAEVSVFARNEHKKQDALSM----G-V-KH-FY--TDPKQC-K-- 232 (348)
T ss_dssp HHHHHTTCCTTCEEEEESCSHHHHHHHHHHH-H-TTCEEEEECSSSTTHHHHHHT----T-C-SE-EE--SSGGGC-C--
T ss_pred HHHHhcCCCCCCEEEEECCcHHHHHHHHHHH-H-CCCeEEEEeCCHHHHHHHHhc----C-C-Ce-ec--CCHHHH-h--
Confidence 3444445588999999999999999999998 3 578999999999999988764 4 1 22 22 333221 1
Q ss_pred CCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEec
Q 039591 201 GEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 201 ~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
+.+|+||.+... ...++.+.+.|+|||+++..+.
T Consensus 233 ~~~D~vid~~g~-------~~~~~~~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 233 EELDFIISTIPT-------HYDLKDYLKLLTYNGDLALVGL 266 (348)
T ss_dssp SCEEEEEECCCS-------CCCHHHHHTTEEEEEEEEECCC
T ss_pred cCCCEEEECCCc-------HHHHHHHHHHHhcCCEEEEECC
Confidence 389999987654 2357788899999999998763
No 301
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=98.10 E-value=2.5e-06 Score=78.84 Aligned_cols=105 Identities=16% Similarity=0.155 Sum_probs=73.8
Q ss_pred HHhhc-cCCCCeEEEecCCCChHHHHHHHhhcCCC-cEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEE---Ecchhhhh
Q 039591 123 LKENG-VVQPKKVAFVGSGPMPLTSIVMAKNHLKA-THFDNFDIDEAANNVARRIVATDFEFEKRMKFL---TGDILQVK 197 (284)
Q Consensus 123 l~~~~-~~~~~~VL~iGsGp~G~~ai~la~~~~~~-~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~---~~D~~~~~ 197 (284)
+.... ..++++||.+|+|++|+.++.+|+ . .| .+|+++|.+++..+.++++ | .+.-+... ..|..+..
T Consensus 187 l~~~~~~~~g~~VlV~GaG~vG~~aiqlak-~-~Ga~~Vi~~~~~~~~~~~~~~l----G-a~~vi~~~~~~~~~~~~~v 259 (380)
T 1vj0_A 187 FDEYPESFAGKTVVIQGAGPLGLFGVVIAR-S-LGAENVIVIAGSPNRLKLAEEI----G-ADLTLNRRETSVEERRKAI 259 (380)
T ss_dssp HHTCSSCCBTCEEEEECCSHHHHHHHHHHH-H-TTBSEEEEEESCHHHHHHHHHT----T-CSEEEETTTSCHHHHHHHH
T ss_pred HHhcCCCCCCCEEEEECcCHHHHHHHHHHH-H-cCCceEEEEcCCHHHHHHHHHc----C-CcEEEeccccCcchHHHHH
Confidence 33344 567899999999999999999998 3 46 5999999999999988764 3 11111111 12222222
Q ss_pred ccC---CCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEec
Q 039591 198 EKL---GEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 198 ~~l---~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
.++ ..+|+||.+... ...++.+.+.|++||+++..+.
T Consensus 260 ~~~~~g~g~Dvvid~~g~-------~~~~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 260 MDITHGRGADFILEATGD-------SRALLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp HHHTTTSCEEEEEECSSC-------TTHHHHHHHHEEEEEEEEECCC
T ss_pred HHHhCCCCCcEEEECCCC-------HHHHHHHHHHHhcCCEEEEEec
Confidence 111 369999988764 3467788899999999998763
No 302
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=98.09 E-value=0.00017 Score=63.24 Aligned_cols=140 Identities=14% Similarity=0.114 Sum_probs=93.0
Q ss_pred ccccccccccccchhhhhhHHHH-HHHHhhccCCCCeEEEecCCCChHHHHHHHhh--c----CCCcEEEEEe-----CC
Q 039591 98 QPLNNLNLFPYYGNYVKLASFEC-RILKENGVVQPKKVAFVGSGPMPLTSIVMAKN--H----LKATHFDNFD-----ID 165 (284)
Q Consensus 98 ~~~~~l~~fp~~~~y~~l~~~E~-~~l~~~~~~~~~~VL~iGsGp~G~~ai~la~~--~----~~~~~V~~vD-----is 165 (284)
.+...+..||.|.+-..+.++-. ..+.+....-+..|+|+|+- -|-+++.++.. . .+..+|+++| ..
T Consensus 36 ~~~e~l~~~~~~~~~~~l~~~l~~~~l~~~i~~vpG~ivE~GV~-rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~ 114 (257)
T 3tos_A 36 PTEELVNNLPLFLRRHQMTDLLSMDALYRQVLDVPGVIMEFGVR-FGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPD 114 (257)
T ss_dssp CGGGGGGCGGGGCCHHHHHHHHHHHHHHHHTTTSCSEEEEECCT-TCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCS
T ss_pred ChHHHHHhHHhhhhHHHHHHHHHHHHHHHHhhCCCCeEEEEecc-cCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCC
Confidence 34556777776665444444321 22233334557799999999 89898887651 1 2457899999 32
Q ss_pred H----------------------HHHHH---HHHHHhhccCCCCCeEEEEcchhhhhccC------CCccEEEEcCcCCC
Q 039591 166 E----------------------AANNV---ARRIVATDFEFEKRMKFLTGDILQVKEKL------GEYDCIFLAALVGM 214 (284)
Q Consensus 166 ~----------------------~~~~~---A~~~~~~~~~l~~~v~~~~~D~~~~~~~l------~~fD~V~~~~~~~~ 214 (284)
+ +.++. .+++.+.++...++++++.|++.+....+ .+||+|++++..
T Consensus 115 ~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~-- 192 (257)
T 3tos_A 115 VNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHECSDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL-- 192 (257)
T ss_dssp CCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHTTSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC--
T ss_pred CccccccccccccCcccccchhHHHHHHHHHHHhhhhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc--
Confidence 1 11221 12233345544589999999998865432 469999999864
Q ss_pred CHHHHHHHHHHHHhccccCcEEEEEec
Q 039591 215 SKEEKMKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 215 ~~~~k~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
+ +.-...++.+...|+|||++++.+.
T Consensus 193 Y-~~t~~~le~~~p~l~~GGvIv~DD~ 218 (257)
T 3tos_A 193 Y-EPTKAVLEAIRPYLTKGSIVAFDEL 218 (257)
T ss_dssp H-HHHHHHHHHHGGGEEEEEEEEESST
T ss_pred c-chHHHHHHHHHHHhCCCcEEEEcCC
Confidence 3 4446789999999999999999873
No 303
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.09 E-value=1.3e-06 Score=69.86 Aligned_cols=86 Identities=16% Similarity=0.169 Sum_probs=61.4
Q ss_pred CCCCeEEEecCCCCh-HHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC-CCccEE
Q 039591 129 VQPKKVAFVGSGPMP-LTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL-GEYDCI 206 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G-~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l-~~fD~V 206 (284)
.++.+||||||| .| -.|..|++ ..|..|+++|++|.+++ |+++|+++...++ +.||+|
T Consensus 34 ~~~~rVlEVG~G-~g~~vA~~La~--~~g~~V~atDInp~Av~-----------------~v~dDiF~P~~~~Y~~~DLI 93 (153)
T 2k4m_A 34 GPGTRVVEVGAG-RFLYVSDYIRK--HSKVDLVLTDIKPSHGG-----------------IVRDDITSPRMEIYRGAALI 93 (153)
T ss_dssp CSSSEEEEETCT-TCCHHHHHHHH--HSCCEEEEECSSCSSTT-----------------EECCCSSSCCHHHHTTEEEE
T ss_pred CCCCcEEEEccC-CChHHHHHHHH--hCCCeEEEEECCccccc-----------------eEEccCCCCcccccCCcCEE
Confidence 456899999999 67 58999986 26789999999987765 7788887643333 689999
Q ss_pred EEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 207 FLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 207 ~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+.-.+- ++-+..+.++++.. |+-++++.
T Consensus 94 YsirPP----~El~~~i~~lA~~v--~adliI~p 121 (153)
T 2k4m_A 94 YSIRPP----AEIHSSLMRVADAV--GARLIIKP 121 (153)
T ss_dssp EEESCC----TTTHHHHHHHHHHH--TCEEEEEC
T ss_pred EEcCCC----HHHHHHHHHHHHHc--CCCEEEEc
Confidence 765543 22244555555543 66677765
No 304
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=98.08 E-value=4.8e-06 Score=77.21 Aligned_cols=110 Identities=17% Similarity=0.162 Sum_probs=74.1
Q ss_pred HHhhccCCCCeEEEecCCCChHHHHHHHhhcCCCc-EEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcc-hhhhhccC
Q 039591 123 LKENGVVQPKKVAFVGSGPMPLTSIVMAKNHLKAT-HFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGD-ILQVKEKL 200 (284)
Q Consensus 123 l~~~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~-~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D-~~~~~~~l 200 (284)
+.....+++++||.+|+|++|+.++.+|+ . .|+ +|+++|.+++.++.++++ | . +.+.+...| +.+...++
T Consensus 178 l~~~~~~~g~~VlV~GaG~vG~~aiqlAk-~-~Ga~~Vi~~~~~~~~~~~a~~l----G-a-~~i~~~~~~~~~~~v~~~ 249 (398)
T 1kol_A 178 AVTAGVGPGSTVYVAGAGPVGLAAAASAR-L-LGAAVVIVGDLNPARLAHAKAQ----G-F-EIADLSLDTPLHEQIAAL 249 (398)
T ss_dssp HHHTTCCTTCEEEEECCSHHHHHHHHHHH-H-TTCSEEEEEESCHHHHHHHHHT----T-C-EEEETTSSSCHHHHHHHH
T ss_pred HHHcCCCCCCEEEEECCcHHHHHHHHHHH-H-CCCCeEEEEcCCHHHHHHHHHc----C-C-cEEccCCcchHHHHHHHH
Confidence 33334478999999999999999999999 4 455 799999999999998765 4 1 212211112 22212111
Q ss_pred ---CCccEEEEcCcCCC--------CHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 201 ---GEYDCIFLAALVGM--------SKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 201 ---~~fD~V~~~~~~~~--------~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
..+|+||.+..... ..+++...++.+.+.|++||++++.+
T Consensus 250 t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 250 LGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp HSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred hCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence 47999998765310 00112347888899999999998765
No 305
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=98.08 E-value=4.5e-06 Score=76.83 Aligned_cols=99 Identities=18% Similarity=0.135 Sum_probs=71.9
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCc-EEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEE--cchhhhhccC--CC
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKAT-HFDNFDIDEAANNVARRIVATDFEFEKRMKFLT--GDILQVKEKL--GE 202 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~-~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~--~D~~~~~~~l--~~ 202 (284)
.+++++||.+|+|++|+.++.+|+ . .|+ +|+++|.+++..+.++++ | .+..+.... .|+.+...++ +.
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak-~-~Ga~~Vi~~~~~~~~~~~a~~l----G-a~~vi~~~~~~~~~~~~v~~~~~~g 265 (376)
T 1e3i_A 193 VTPGSTCAVFGLGCVGLSAIIGCK-I-AGASRIIAIDINGEKFPKAKAL----G-ATDCLNPRELDKPVQDVITELTAGG 265 (376)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHH-H-TTCSEEEEECSCGGGHHHHHHT----T-CSEEECGGGCSSCHHHHHHHHHTSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHH-H-cCCCeEEEEcCCHHHHHHHHHh----C-CcEEEccccccchHHHHHHHHhCCC
Confidence 478899999999999999999998 3 466 899999999999988764 3 111111111 1232222111 47
Q ss_pred ccEEEEcCcCCCCHHHHHHHHHHHHhccccC-cEEEEEe
Q 039591 203 YDCIFLAALVGMSKEEKMKIIRHIRKYMKDG-GILLVRS 240 (284)
Q Consensus 203 fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pG-G~lv~~~ 240 (284)
+|+||.+... ...++.+.+.|++| |+++..+
T Consensus 266 ~Dvvid~~G~-------~~~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 266 VDYSLDCAGT-------AQTLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp BSEEEESSCC-------HHHHHHHHHTBCTTTCEEEECC
T ss_pred ccEEEECCCC-------HHHHHHHHHHhhcCCCEEEEEC
Confidence 9999988764 46788899999999 9998765
No 306
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=98.07 E-value=3.9e-06 Score=77.12 Aligned_cols=99 Identities=16% Similarity=0.099 Sum_probs=71.9
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCc-EEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEE--cchhhhhccC--CC
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKAT-HFDNFDIDEAANNVARRIVATDFEFEKRMKFLT--GDILQVKEKL--GE 202 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~-~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~--~D~~~~~~~l--~~ 202 (284)
.+++++||.+|+|++|+.++.+|+ . .|+ +|+++|.+++..+.++++ | .+.-+.... .|+.+...++ +.
T Consensus 189 ~~~g~~VlV~GaG~vG~~aiqlak-~-~Ga~~Vi~~~~~~~~~~~a~~l----G-a~~vi~~~~~~~~~~~~i~~~t~gg 261 (373)
T 1p0f_A 189 VTPGSTCAVFGLGGVGFSAIVGCK-A-AGASRIIGVGTHKDKFPKAIEL----G-ATECLNPKDYDKPIYEVICEKTNGG 261 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHH-H-HTCSEEEEECSCGGGHHHHHHT----T-CSEEECGGGCSSCHHHHHHHHTTSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHH-H-cCCCeEEEECCCHHHHHHHHHc----C-CcEEEecccccchHHHHHHHHhCCC
Confidence 478899999999999999999998 3 456 899999999999998764 3 111111110 1232222111 47
Q ss_pred ccEEEEcCcCCCCHHHHHHHHHHHHhccccC-cEEEEEe
Q 039591 203 YDCIFLAALVGMSKEEKMKIIRHIRKYMKDG-GILLVRS 240 (284)
Q Consensus 203 fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pG-G~lv~~~ 240 (284)
+|+||.+... ...++.+.+.|++| |+++...
T Consensus 262 ~Dvvid~~g~-------~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 262 VDYAVECAGR-------IETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp BSEEEECSCC-------HHHHHHHHHTBCTTTCEEEECC
T ss_pred CCEEEECCCC-------HHHHHHHHHHHhcCCCEEEEEc
Confidence 9999988764 46788899999999 9998765
No 307
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=98.06 E-value=1.8e-06 Score=80.24 Aligned_cols=110 Identities=15% Similarity=0.131 Sum_probs=73.6
Q ss_pred HHhhccCCCCeEEEecCCCChHHHHHHHhhcCCCc-EEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcch-hhhhccC
Q 039591 123 LKENGVVQPKKVAFVGSGPMPLTSIVMAKNHLKAT-HFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDI-LQVKEKL 200 (284)
Q Consensus 123 l~~~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~-~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~-~~~~~~l 200 (284)
+.....+++++||.+|+|++|+.++.+|+ . .|+ +|+++|.+++.++.++++ | . +.+.+...|. .+...++
T Consensus 178 l~~~~~~~g~~VlV~GaG~vG~~aiqlak-~-~Ga~~Vi~~~~~~~~~~~a~~l----G-a-~~i~~~~~~~~~~~~~~~ 249 (398)
T 2dph_A 178 CVSAGVKPGSHVYIAGAGPVGRCAAAGAR-L-LGAACVIVGDQNPERLKLLSDA----G-F-ETIDLRNSAPLRDQIDQI 249 (398)
T ss_dssp HHHTTCCTTCEEEEECCSHHHHHHHHHHH-H-HTCSEEEEEESCHHHHHHHHTT----T-C-EEEETTSSSCHHHHHHHH
T ss_pred HHHcCCCCCCEEEEECCCHHHHHHHHHHH-H-cCCCEEEEEcCCHHHHHHHHHc----C-C-cEEcCCCcchHHHHHHHH
Confidence 33334478999999999999999999998 3 456 999999999999888754 4 1 2122212232 2211111
Q ss_pred ---CCccEEEEcCcCCCC---H----HHHHHHHHHHHhccccCcEEEEEe
Q 039591 201 ---GEYDCIFLAALVGMS---K----EEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 201 ---~~fD~V~~~~~~~~~---~----~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
..||+||.+...... . .+....++.+.+.|++||++++.+
T Consensus 250 ~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 250 LGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPG 299 (398)
T ss_dssp HSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCS
T ss_pred hCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEec
Confidence 369999988654210 0 001246888899999999998765
No 308
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=98.05 E-value=5.1e-06 Score=75.63 Aligned_cols=98 Identities=14% Similarity=0.162 Sum_probs=71.2
Q ss_pred CCCeEEEecCCCChHHHHHHHhhcCCCc-EEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC---CCccE
Q 039591 130 QPKKVAFVGSGPMPLTSIVMAKNHLKAT-HFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL---GEYDC 205 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~ai~la~~~~~~~-~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l---~~fD~ 205 (284)
++++||.+|+|++|..++.+|+ . .|+ +|+++|.+++..+.++++ | ...-+.....|+.+...++ ..+|+
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~-~-~Ga~~Vi~~~~~~~~~~~~~~~----G-a~~~~~~~~~~~~~~v~~~~~g~g~D~ 239 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAK-A-SGAYPVIVSEPSDFRRELAKKV----G-ADYVINPFEEDVVKEVMDITDGNGVDV 239 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHH-H-TTCCSEEEECSCHHHHHHHHHH----T-CSEEECTTTSCHHHHHHHHTTTSCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHH-H-cCCCEEEEECCCHHHHHHHHHh----C-CCEEECCCCcCHHHHHHHHcCCCCCCE
Confidence 7899999999999999999998 3 467 899999999999988865 3 1111111112332222211 36999
Q ss_pred EEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEec
Q 039591 206 IFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 206 V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
||.+... ...++.+.+.|++||+++..+.
T Consensus 240 vid~~g~-------~~~~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 240 FLEFSGA-------PKALEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp EEECSCC-------HHHHHHHHHHEEEEEEEEECCC
T ss_pred EEECCCC-------HHHHHHHHHHHhcCCEEEEEcc
Confidence 9988764 4678888999999999988663
No 309
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=98.04 E-value=5.3e-06 Score=76.31 Aligned_cols=99 Identities=16% Similarity=0.159 Sum_probs=71.7
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCc-EEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEE--cchhhhhccC--CC
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKAT-HFDNFDIDEAANNVARRIVATDFEFEKRMKFLT--GDILQVKEKL--GE 202 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~-~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~--~D~~~~~~~l--~~ 202 (284)
.+++++||.+|+|++|..++.+|+ . .|+ +|+++|.+++..+.++++ | .+..+.... .|+.+...+. +.
T Consensus 190 ~~~g~~VlV~GaG~vG~~a~qla~-~-~Ga~~Vi~~~~~~~~~~~~~~l----G-a~~vi~~~~~~~~~~~~~~~~~~~g 262 (374)
T 1cdo_A 190 VEPGSTCAVFGLGAVGLAAVMGCH-S-AGAKRIIAVDLNPDKFEKAKVF----G-ATDFVNPNDHSEPISQVLSKMTNGG 262 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHH-H-TTCSEEEEECSCGGGHHHHHHT----T-CCEEECGGGCSSCHHHHHHHHHTSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHH-H-cCCCEEEEEcCCHHHHHHHHHh----C-CceEEeccccchhHHHHHHHHhCCC
Confidence 478899999999999999999998 3 466 899999999999998764 3 111111110 1222221111 47
Q ss_pred ccEEEEcCcCCCCHHHHHHHHHHHHhccccC-cEEEEEe
Q 039591 203 YDCIFLAALVGMSKEEKMKIIRHIRKYMKDG-GILLVRS 240 (284)
Q Consensus 203 fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pG-G~lv~~~ 240 (284)
+|+||.+... ...++.+.+.|++| |+++..+
T Consensus 263 ~D~vid~~g~-------~~~~~~~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 263 VDFSLECVGN-------VGVMRNALESCLKGWGVSVLVG 294 (374)
T ss_dssp BSEEEECSCC-------HHHHHHHHHTBCTTTCEEEECS
T ss_pred CCEEEECCCC-------HHHHHHHHHHhhcCCcEEEEEc
Confidence 9999988764 46788899999999 9998765
No 310
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=98.00 E-value=6.9e-06 Score=76.44 Aligned_cols=101 Identities=13% Similarity=0.161 Sum_probs=69.4
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCc-EEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC---CCc
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKAT-HFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL---GEY 203 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~-~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l---~~f 203 (284)
.+++++||.+|+|++|+.++.+|+ . .|+ +|+++|.+++..+.++++ | ...-+.....|..+...++ ..+
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak-~-~Ga~~Vi~~~~~~~~~~~~~~l----G-a~~vi~~~~~~~~~~i~~~t~g~g~ 283 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILK-H-AGASKVILSEPSEVRRNLAKEL----G-ADHVIDPTKENFVEAVLDYTNGLGA 283 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHH-H-TTCSEEEEECSCHHHHHHHHHH----T-CSEEECTTTSCHHHHHHHHTTTCCC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHH-H-cCCCEEEEECCCHHHHHHHHHc----C-CCEEEcCCCCCHHHHHHHHhCCCCC
Confidence 478899999999999999999998 3 466 999999999999999876 3 1111111123333222222 469
Q ss_pred cEEEEcCcCCCCHHHHHHHHHHHHhcc----ccCcEEEEEec
Q 039591 204 DCIFLAALVGMSKEEKMKIIRHIRKYM----KDGGILLVRSA 241 (284)
Q Consensus 204 D~V~~~~~~~~~~~~k~~~l~~~~~~L----~pGG~lv~~~~ 241 (284)
|+||.+... + ...+..+.+.| ++||+++..+.
T Consensus 284 D~vid~~g~----~--~~~~~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 284 KLFLEATGV----P--QLVWPQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp SEEEECSSC----H--HHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred CEEEECCCC----c--HHHHHHHHHHHHhccCCCcEEEEeCC
Confidence 999988654 1 12444444444 99999998763
No 311
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=97.99 E-value=6.3e-06 Score=75.69 Aligned_cols=99 Identities=19% Similarity=0.185 Sum_probs=71.9
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCc-EEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEE--cchhhhhccC--CC
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKAT-HFDNFDIDEAANNVARRIVATDFEFEKRMKFLT--GDILQVKEKL--GE 202 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~-~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~--~D~~~~~~~l--~~ 202 (284)
.+++++||.+|+|++|+.++.+|+ . .|+ +|+++|.+++..+.++++ | ....+.... .|+.+...++ +.
T Consensus 188 ~~~g~~VlV~GaG~vG~~avqla~-~-~Ga~~Vi~~~~~~~~~~~~~~l----G-a~~vi~~~~~~~~~~~~v~~~~~~g 260 (373)
T 2fzw_A 188 LEPGSVCAVFGLGGVGLAVIMGCK-V-AGASRIIGVDINKDKFARAKEF----G-ATECINPQDFSKPIQEVLIEMTDGG 260 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHH-H-HTCSEEEEECSCGGGHHHHHHH----T-CSEEECGGGCSSCHHHHHHHHTTSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHH-H-cCCCeEEEEcCCHHHHHHHHHc----C-CceEeccccccccHHHHHHHHhCCC
Confidence 478899999999999999999998 3 456 899999999999998865 3 111111110 1222222111 47
Q ss_pred ccEEEEcCcCCCCHHHHHHHHHHHHhccccC-cEEEEEe
Q 039591 203 YDCIFLAALVGMSKEEKMKIIRHIRKYMKDG-GILLVRS 240 (284)
Q Consensus 203 fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pG-G~lv~~~ 240 (284)
+|+||.+... ...++.+.+.|++| |+++..+
T Consensus 261 ~D~vid~~g~-------~~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 261 VDYSFECIGN-------VKVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp BSEEEECSCC-------HHHHHHHHHTBCTTTCEEEECS
T ss_pred CCEEEECCCc-------HHHHHHHHHhhccCCcEEEEEe
Confidence 9999988764 46788899999999 9998765
No 312
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=97.99 E-value=6.9e-06 Score=75.50 Aligned_cols=99 Identities=17% Similarity=0.184 Sum_probs=71.6
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCc-EEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEE--cchhhhhccC--CC
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKAT-HFDNFDIDEAANNVARRIVATDFEFEKRMKFLT--GDILQVKEKL--GE 202 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~-~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~--~D~~~~~~~l--~~ 202 (284)
.+++++||.+|+|++|..++.+|+ . .|+ +|+++|.+++..+.++++ | ....+.... .|+.+...++ +.
T Consensus 189 ~~~g~~VlV~GaG~vG~~a~qla~-~-~Ga~~Vi~~~~~~~~~~~~~~l----G-a~~vi~~~~~~~~~~~~~~~~~~~g 261 (374)
T 2jhf_A 189 VTQGSTCAVFGLGGVGLSVIMGCK-A-AGAARIIGVDINKDKFAKAKEV----G-ATECVNPQDYKKPIQEVLTEMSNGG 261 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHH-H-TTCSEEEEECSCGGGHHHHHHT----T-CSEEECGGGCSSCHHHHHHHHTTSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHH-H-cCCCeEEEEcCCHHHHHHHHHh----C-CceEecccccchhHHHHHHHHhCCC
Confidence 478899999999999999999998 3 466 899999999999988764 3 111111110 1222222111 47
Q ss_pred ccEEEEcCcCCCCHHHHHHHHHHHHhccccC-cEEEEEe
Q 039591 203 YDCIFLAALVGMSKEEKMKIIRHIRKYMKDG-GILLVRS 240 (284)
Q Consensus 203 fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pG-G~lv~~~ 240 (284)
+|+||.+... ...++.+.+.|++| |+++..+
T Consensus 262 ~D~vid~~g~-------~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 262 VDFSFEVIGR-------LDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp BSEEEECSCC-------HHHHHHHHHHBCTTTCEEEECS
T ss_pred CcEEEECCCC-------HHHHHHHHHHhhcCCcEEEEec
Confidence 9999988764 46788889999999 9998765
No 313
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=97.98 E-value=5.5e-06 Score=75.97 Aligned_cols=98 Identities=15% Similarity=0.057 Sum_probs=71.3
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEE-cchhhhhccC---CCc
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLT-GDILQVKEKL---GEY 203 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~-~D~~~~~~~l---~~f 203 (284)
.+++++||.+|+|++|+.++.+|+ ..|++|+++|.+++..+.++++ | ...-+. .. .|..+...++ ..+
T Consensus 187 ~~~g~~VlV~G~G~vG~~a~qla~--~~Ga~Vi~~~~~~~~~~~~~~l----G-a~~vi~-~~~~~~~~~v~~~~~g~g~ 258 (363)
T 3uog_A 187 LRAGDRVVVQGTGGVALFGLQIAK--ATGAEVIVTSSSREKLDRAFAL----G-ADHGIN-RLEEDWVERVYALTGDRGA 258 (363)
T ss_dssp CCTTCEEEEESSBHHHHHHHHHHH--HTTCEEEEEESCHHHHHHHHHH----T-CSEEEE-TTTSCHHHHHHHHHTTCCE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHH--HcCCEEEEEecCchhHHHHHHc----C-CCEEEc-CCcccHHHHHHHHhCCCCc
Confidence 478899999999999999999998 3578999999999999998775 3 111122 11 2322222111 379
Q ss_pred cEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEec
Q 039591 204 DCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 204 D~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
|+||.+... ..+..+.+.|+|||+++..+.
T Consensus 259 D~vid~~g~--------~~~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 259 DHILEIAGG--------AGLGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp EEEEEETTS--------SCHHHHHHHEEEEEEEEEECC
T ss_pred eEEEECCCh--------HHHHHHHHHhhcCCEEEEEec
Confidence 999988652 246678889999999998763
No 314
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=97.95 E-value=8.4e-06 Score=73.51 Aligned_cols=98 Identities=9% Similarity=0.017 Sum_probs=71.0
Q ss_pred cCCCCeEEEec-CCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC---CCc
Q 039591 128 VVQPKKVAFVG-SGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL---GEY 203 (284)
Q Consensus 128 ~~~~~~VL~iG-sGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l---~~f 203 (284)
.+++++||..| +|++|..++.+++ ..|++|+++|.+++..+.++++ | ....+.....|..+...+. ..+
T Consensus 138 ~~~g~~VlV~Ga~g~iG~~~~~~a~--~~Ga~Vi~~~~~~~~~~~~~~~----G-a~~~~~~~~~~~~~~~~~~~~~~g~ 210 (325)
T 3jyn_A 138 VKPGEIILFHAAAGGVGSLACQWAK--ALGAKLIGTVSSPEKAAHAKAL----G-AWETIDYSHEDVAKRVLELTDGKKC 210 (325)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHH--HHTCEEEEEESSHHHHHHHHHH----T-CSEEEETTTSCHHHHHHHHTTTCCE
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHc----C-CCEEEeCCCccHHHHHHHHhCCCCc
Confidence 37889999999 7999999999998 3578999999999999998865 3 1111221122322222111 479
Q ss_pred cEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 204 DCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 204 D~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|+|+.+... ..+..+.+.|++||+++..+
T Consensus 211 Dvvid~~g~--------~~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 211 PVVYDGVGQ--------DTWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp EEEEESSCG--------GGHHHHHTTEEEEEEEEECC
T ss_pred eEEEECCCh--------HHHHHHHHHhcCCCEEEEEe
Confidence 999987653 35678889999999999876
No 315
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=97.93 E-value=6.3e-06 Score=75.35 Aligned_cols=98 Identities=9% Similarity=0.091 Sum_probs=70.6
Q ss_pred cCCC------CeEEEecCCCChHHH-HHHH-hhcCCCcE-EEEEeCCHH---HHHHHHHHHhhccCCCCCeEEEEcchhh
Q 039591 128 VVQP------KKVAFVGSGPMPLTS-IVMA-KNHLKATH-FDNFDIDEA---ANNVARRIVATDFEFEKRMKFLTGDILQ 195 (284)
Q Consensus 128 ~~~~------~~VL~iGsGp~G~~a-i~la-~~~~~~~~-V~~vDis~~---~~~~A~~~~~~~~~l~~~v~~~~~D~~~ 195 (284)
.+++ ++||.+|+|++|+.+ +.+| + . .|++ |+++|.+++ ..+.++++ | . +.+.+...|+.+
T Consensus 164 ~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k-~-~Ga~~Vi~~~~~~~~~~~~~~~~~l----G-a-~~v~~~~~~~~~ 235 (357)
T 2b5w_A 164 ASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVD-D-KGYENLYCLGRRDRPDPTIDIIEEL----D-A-TYVDSRQTPVED 235 (357)
T ss_dssp HTTTTSCCCCCEEEEECCSHHHHHHHHHHHHC-T-TCCCEEEEEECCCSSCHHHHHHHHT----T-C-EEEETTTSCGGG
T ss_pred CCCCcccCCCCEEEEECCCHHHHHHHHHHHHH-H-cCCcEEEEEeCCcccHHHHHHHHHc----C-C-cccCCCccCHHH
Confidence 3677 999999999999999 9999 8 3 5666 999999998 88888764 3 1 111111122222
Q ss_pred hhcc-CCCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEec
Q 039591 196 VKEK-LGEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 196 ~~~~-l~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
..+ .+.+|+||.+... ...++.+.+.|++||+++..+.
T Consensus 236 -i~~~~gg~Dvvid~~g~-------~~~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 236 -VPDVYEQMDFIYEATGF-------PKHAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp -HHHHSCCEEEEEECSCC-------HHHHHHHHHHEEEEEEEEECCC
T ss_pred -HHHhCCCCCEEEECCCC-------hHHHHHHHHHHhcCCEEEEEeC
Confidence 111 1379999988764 4568888999999999988653
No 316
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.93 E-value=5.2e-05 Score=69.70 Aligned_cols=94 Identities=9% Similarity=0.051 Sum_probs=62.2
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.+|.+|+|+||+|.|.|-. +++ .|++|++||+.+- +..+. . ..+|+++++|+......-+.||+|++
T Consensus 210 ~~G~~vlDLGAaPGGWT~~-l~~---rg~~V~aVD~~~l----~~~l~-~----~~~V~~~~~d~~~~~~~~~~~D~vvs 276 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQ-LVK---RNMWVYSVDNGPM----AQSLM-D----TGQVTWLREDGFKFRPTRSNISWMVC 276 (375)
T ss_dssp CTTCEEEEETCTTCHHHHH-HHH---TTCEEEEECSSCC----CHHHH-T----TTCEEEECSCTTTCCCCSSCEEEEEE
T ss_pred CCCCEEEEeCcCCCHHHHH-HHH---CCCEEEEEEhhhc----Chhhc-c----CCCeEEEeCccccccCCCCCcCEEEE
Confidence 7899999999999887654 555 4789999998642 12221 1 25799999999876544468999999
Q ss_pred cCcCCCCHHHHHHHHHHHHhccccCcEEE
Q 039591 209 AALVGMSKEEKMKIIRHIRKYMKDGGILL 237 (284)
Q Consensus 209 ~~~~~~~~~~k~~~l~~~~~~L~pGG~lv 237 (284)
+... .+..-..+...+......++.++
T Consensus 277 Dm~~--~p~~~~~l~~~wl~~~~~~~aI~ 303 (375)
T 4auk_A 277 DMVE--KPAKVAALMAQWLVNGWCRETIF 303 (375)
T ss_dssp CCSS--CHHHHHHHHHHHHHTTSCSEEEE
T ss_pred cCCC--ChHHhHHHHHHHHhccccceEEE
Confidence 8754 22333344444444444444443
No 317
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=97.91 E-value=1.2e-05 Score=72.79 Aligned_cols=100 Identities=12% Similarity=0.114 Sum_probs=70.9
Q ss_pred ccCCCCeEEEecC-CCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHH-HHHHhhccCCCCCeEEEEcchhhhhccC--CC
Q 039591 127 GVVQPKKVAFVGS-GPMPLTSIVMAKNHLKATHFDNFDIDEAANNVA-RRIVATDFEFEKRMKFLTGDILQVKEKL--GE 202 (284)
Q Consensus 127 ~~~~~~~VL~iGs-Gp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A-~~~~~~~~~l~~~v~~~~~D~~~~~~~l--~~ 202 (284)
..+++++||..|+ |++|..++.+++ ..|++|+++|.+++..+.+ +++ | ....+.....|..+...+. +.
T Consensus 146 ~~~~g~~vlI~Ga~g~iG~~~~~~a~--~~Ga~Vi~~~~~~~~~~~~~~~~----g-~~~~~~~~~~~~~~~~~~~~~~~ 218 (336)
T 4b7c_A 146 QPKNGETVVISGAAGAVGSVAGQIAR--LKGCRVVGIAGGAEKCRFLVEEL----G-FDGAIDYKNEDLAAGLKRECPKG 218 (336)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHH--HTTCEEEEEESSHHHHHHHHHTT----C-CSEEEETTTSCHHHHHHHHCTTC
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHHc----C-CCEEEECCCHHHHHHHHHhcCCC
Confidence 3478999999998 889999999998 3678999999999998887 433 3 1111211122322221111 57
Q ss_pred ccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEec
Q 039591 203 YDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 203 fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
+|+|+.+... ..++.+.+.|++||+++..+.
T Consensus 219 ~d~vi~~~g~--------~~~~~~~~~l~~~G~iv~~G~ 249 (336)
T 4b7c_A 219 IDVFFDNVGG--------EILDTVLTRIAFKARIVLCGA 249 (336)
T ss_dssp EEEEEESSCH--------HHHHHHHTTEEEEEEEEECCC
T ss_pred ceEEEECCCc--------chHHHHHHHHhhCCEEEEEee
Confidence 9999987652 468889999999999998763
No 318
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=97.90 E-value=1.2e-05 Score=73.06 Aligned_cols=96 Identities=10% Similarity=0.076 Sum_probs=70.2
Q ss_pred CCCeEEEe-cCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC--CCccEE
Q 039591 130 QPKKVAFV-GSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL--GEYDCI 206 (284)
Q Consensus 130 ~~~~VL~i-GsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l--~~fD~V 206 (284)
++++||.+ |+|++|+.++.+|+ ..|++|+++|.+++..+.++++ | ...-+.. ..|..+...+. +.+|+|
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~--~~Ga~Vi~~~~~~~~~~~~~~l----G-a~~vi~~-~~~~~~~~~~~~~~g~Dvv 221 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAK--AYGLRVITTASRNETIEWTKKM----G-ADIVLNH-KESLLNQFKTQGIELVDYV 221 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHH--HTTCEEEEECCSHHHHHHHHHH----T-CSEEECT-TSCHHHHHHHHTCCCEEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHH--HcCCEEEEEeCCHHHHHHHHhc----C-CcEEEEC-CccHHHHHHHhCCCCccEE
Confidence 78999999 79999999999998 3578999999999999999875 3 1111111 12322222222 579999
Q ss_pred EEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 207 FLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 207 ~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|.+... ...++.+.+.|++||+++...
T Consensus 222 ~d~~g~-------~~~~~~~~~~l~~~G~iv~~~ 248 (346)
T 3fbg_A 222 FCTFNT-------DMYYDDMIQLVKPRGHIATIV 248 (346)
T ss_dssp EESSCH-------HHHHHHHHHHEEEEEEEEESS
T ss_pred EECCCc-------hHHHHHHHHHhccCCEEEEEC
Confidence 987654 466788889999999997654
No 319
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=97.90 E-value=4.9e-06 Score=75.61 Aligned_cols=100 Identities=19% Similarity=0.191 Sum_probs=71.7
Q ss_pred hccCCCCeEEEecCCCChHHHHHHHhhcCCCc-EEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhcc--CCC
Q 039591 126 NGVVQPKKVAFVGSGPMPLTSIVMAKNHLKAT-HFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEK--LGE 202 (284)
Q Consensus 126 ~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~-~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~--l~~ 202 (284)
... ++++||.+|+|++|..++.+|+ . .|+ +|+++|.+++..+.++++ .. .-+.....|+.+...+ -+.
T Consensus 161 ~~~-~g~~VlV~GaG~vG~~~~q~a~-~-~Ga~~Vi~~~~~~~~~~~~~~l-a~-----~v~~~~~~~~~~~~~~~~~~g 231 (343)
T 2dq4_A 161 SGV-SGKSVLITGAGPIGLMAAMVVR-A-SGAGPILVSDPNPYRLAFARPY-AD-----RLVNPLEEDLLEVVRRVTGSG 231 (343)
T ss_dssp TCC-TTSCEEEECCSHHHHHHHHHHH-H-TTCCSEEEECSCHHHHGGGTTT-CS-----EEECTTTSCHHHHHHHHHSSC
T ss_pred CCC-CCCEEEEECCCHHHHHHHHHHH-H-cCCCEEEEECCCHHHHHHHHHh-HH-----hccCcCccCHHHHHHHhcCCC
Confidence 344 8899999999999999999998 3 567 899999999998887765 22 1111111232222111 247
Q ss_pred ccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEec
Q 039591 203 YDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 203 fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
+|+||.+... ...++.+.+.|++||+++..+.
T Consensus 232 ~D~vid~~g~-------~~~~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 232 VEVLLEFSGN-------EAAIHQGLMALIPGGEARILGI 263 (343)
T ss_dssp EEEEEECSCC-------HHHHHHHHHHEEEEEEEEECCC
T ss_pred CCEEEECCCC-------HHHHHHHHHHHhcCCEEEEEec
Confidence 9999988764 4678888999999999988653
No 320
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=97.89 E-value=9.8e-06 Score=74.13 Aligned_cols=103 Identities=15% Similarity=0.122 Sum_probs=70.6
Q ss_pred HHhhccC-CCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCC
Q 039591 123 LKENGVV-QPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLG 201 (284)
Q Consensus 123 l~~~~~~-~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~ 201 (284)
+.+.... ++++||.+|+|++|+.++.+|+ . .|++|+++|.+++..+.+++. +| . +.+ +-..+........+
T Consensus 172 l~~~~~~~~g~~VlV~GaG~vG~~a~qlak-~-~Ga~Vi~~~~~~~~~~~~~~~---lG-a-~~v-i~~~~~~~~~~~~~ 243 (357)
T 2cf5_A 172 LSHFGLKQPGLRGGILGLGGVGHMGVKIAK-A-MGHHVTVISSSNKKREEALQD---LG-A-DDY-VIGSDQAKMSELAD 243 (357)
T ss_dssp HHHTSTTSTTCEEEEECCSHHHHHHHHHHH-H-HTCEEEEEESSTTHHHHHHTT---SC-C-SCE-EETTCHHHHHHSTT
T ss_pred HHhcCCCCCCCEEEEECCCHHHHHHHHHHH-H-CCCeEEEEeCChHHHHHHHHH---cC-C-cee-eccccHHHHHHhcC
Confidence 3333446 8999999999999999999998 3 467999999999988877622 23 1 221 11122111111125
Q ss_pred CccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 202 EYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 202 ~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.+|+||.+.... ..++.+.+.|++||+++..+
T Consensus 244 g~D~vid~~g~~-------~~~~~~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 244 SLDYVIDTVPVH-------HALEPYLSLLKLDGKLILMG 275 (357)
T ss_dssp TEEEEEECCCSC-------CCSHHHHTTEEEEEEEEECS
T ss_pred CCCEEEECCCCh-------HHHHHHHHHhccCCEEEEeC
Confidence 799999886542 23566778999999998865
No 321
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=97.87 E-value=8.5e-06 Score=74.55 Aligned_cols=105 Identities=21% Similarity=0.142 Sum_probs=72.4
Q ss_pred HHHhhccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEc-chhhhhccC
Q 039591 122 ILKENGVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTG-DILQVKEKL 200 (284)
Q Consensus 122 ~l~~~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~-D~~~~~~~l 200 (284)
.+.+...+++++||.+|+|++|+.++.+|+. .|++|+++|.+++..+.++++ | ...-+..... |..+...
T Consensus 171 ~l~~~~~~~g~~VlV~GaG~vG~~~~qlak~--~Ga~Vi~~~~~~~~~~~~~~l----G-a~~v~~~~~~~~~~~~~~-- 241 (360)
T 1piw_A 171 PLVRNGCGPGKKVGIVGLGGIGSMGTLISKA--MGAETYVISRSSRKREDAMKM----G-ADHYIATLEEGDWGEKYF-- 241 (360)
T ss_dssp HHHHTTCSTTCEEEEECCSHHHHHHHHHHHH--HTCEEEEEESSSTTHHHHHHH----T-CSEEEEGGGTSCHHHHSC--
T ss_pred HHHHcCCCCCCEEEEECCCHHHHHHHHHHHH--CCCEEEEEcCCHHHHHHHHHc----C-CCEEEcCcCchHHHHHhh--
Confidence 3444445789999999999999999999983 577899999999999988874 3 1111111111 2222111
Q ss_pred CCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 201 GEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 201 ~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+.+|+||.+.... . ...++.+.+.|++||+++..+
T Consensus 242 ~~~D~vid~~g~~-~----~~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 242 DTFDLIVVCASSL-T----DIDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp SCEEEEEECCSCS-T----TCCTTTGGGGEEEEEEEEECC
T ss_pred cCCCEEEECCCCC-c----HHHHHHHHHHhcCCCEEEEec
Confidence 5899999876540 0 123567788999999998765
No 322
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=97.85 E-value=2.6e-05 Score=71.44 Aligned_cols=99 Identities=12% Similarity=0.124 Sum_probs=70.8
Q ss_pred cCCCCeEEEec-CCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC--CCcc
Q 039591 128 VVQPKKVAFVG-SGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL--GEYD 204 (284)
Q Consensus 128 ~~~~~~VL~iG-sGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l--~~fD 204 (284)
.+++++||.+| +|++|..++.+|+ . .|++|+++|.+++..+.++++ | ....+.....|..+..... +.+|
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~-~-~Ga~Vi~~~~~~~~~~~~~~~----G-a~~~~~~~~~~~~~~~~~~~~~g~D 233 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSK-K-AKCHVIGTCSSDEKSAFLKSL----G-CDRPINYKTEPVGTVLKQEYPEGVD 233 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHH-H-TTCEEEEEESSHHHHHHHHHT----T-CSEEEETTTSCHHHHHHHHCTTCEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHH-h-CCCEEEEEECCHHHHHHHHHc----C-CcEEEecCChhHHHHHHHhcCCCCC
Confidence 47889999999 7999999999998 3 578999999999999888764 3 1111111112222221111 4799
Q ss_pred EEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEec
Q 039591 205 CIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 205 ~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
+||.+... ..++.+.+.|++||+++..+.
T Consensus 234 ~vid~~g~--------~~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 234 VVYESVGG--------AMFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp EEEECSCT--------HHHHHHHHHEEEEEEEEECCC
T ss_pred EEEECCCH--------HHHHHHHHHHhcCCEEEEEeC
Confidence 99988653 467788899999999988663
No 323
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=97.85 E-value=1.1e-05 Score=72.95 Aligned_cols=98 Identities=17% Similarity=0.097 Sum_probs=70.7
Q ss_pred cCCCCeEEEec-CCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhcc---CCCc
Q 039591 128 VVQPKKVAFVG-SGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEK---LGEY 203 (284)
Q Consensus 128 ~~~~~~VL~iG-sGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~---l~~f 203 (284)
.+++++||.+| +|++|..++.+++ ..|++|+++|.+++..+.++++ | ....+.....|..+...+ -..+
T Consensus 146 ~~~g~~vlV~Ga~g~iG~~~~~~a~--~~Ga~Vi~~~~~~~~~~~~~~~----g-a~~~~~~~~~~~~~~~~~~~~~~g~ 218 (334)
T 3qwb_A 146 VKKGDYVLLFAAAGGVGLILNQLLK--MKGAHTIAVASTDEKLKIAKEY----G-AEYLINASKEDILRQVLKFTNGKGV 218 (334)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHH--HTTCEEEEEESSHHHHHHHHHT----T-CSEEEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHc----C-CcEEEeCCCchHHHHHHHHhCCCCc
Confidence 37889999999 7889999999998 3578999999999999988774 3 111111111233222211 1469
Q ss_pred cEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 204 DCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 204 D~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|+||.+... ..++.+.+.|++||+++..+
T Consensus 219 D~vid~~g~--------~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 219 DASFDSVGK--------DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp EEEEECCGG--------GGHHHHHHHEEEEEEEEECC
T ss_pred eEEEECCCh--------HHHHHHHHHhccCCEEEEEc
Confidence 999988753 35778889999999999865
No 324
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.84 E-value=1.4e-05 Score=70.41 Aligned_cols=111 Identities=11% Similarity=0.103 Sum_probs=64.3
Q ss_pred hccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccE
Q 039591 126 NGVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDC 205 (284)
Q Consensus 126 ~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~ 205 (284)
....++.+|||+||||.|.+- ..++ ..+...|+++|+.-+........ .. ...++.+..+++......-+.||+
T Consensus 70 ~~l~~~~~VLDLGaAPGGWSQ-vAa~-~~~~~~v~g~dVGvDl~~~pi~~-~~---~g~~ii~~~~~~dv~~l~~~~~Dl 143 (277)
T 3evf_A 70 GYVKLEGRVIDLGCGRGGWCY-YAAA-QKEVSGVKGFTLGRDGHEKPMNV-QS---LGWNIITFKDKTDIHRLEPVKCDT 143 (277)
T ss_dssp TSSCCCEEEEEETCTTCHHHH-HHHT-STTEEEEEEECCCCTTCCCCCCC-CB---TTGGGEEEECSCCTTTSCCCCCSE
T ss_pred CCCCCCCEEEEecCCCCHHHH-HHHH-hcCCCcceeEEEeccCccccccc-Cc---CCCCeEEEeccceehhcCCCCccE
Confidence 344778899999999877654 4443 23445788888874321000000 00 012344455554221122268999
Q ss_pred EEEcCcC--CCCHHHH---HHHHHHHHhccccC-cEEEEEecc
Q 039591 206 IFLAALV--GMSKEEK---MKIIRHIRKYMKDG-GILLVRSAK 242 (284)
Q Consensus 206 V~~~~~~--~~~~~~k---~~~l~~~~~~L~pG-G~lv~~~~~ 242 (284)
|+++... |...-|. ..+++.+.++|+|| |.+++.-..
T Consensus 144 VlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 144 LLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp EEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred EEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 9998533 2221222 24578888999999 999986644
No 325
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=97.83 E-value=6.5e-05 Score=67.47 Aligned_cols=101 Identities=15% Similarity=0.105 Sum_probs=69.2
Q ss_pred HHHhhccCCCCeEEEec-CCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC
Q 039591 122 ILKENGVVQPKKVAFVG-SGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL 200 (284)
Q Consensus 122 ~l~~~~~~~~~~VL~iG-sGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l 200 (284)
.+.....+++++||.+| +|++|+.++.+|+ . .|++|++++ +++..+.++++ | ...-+.....|. .....
T Consensus 144 al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~-~-~Ga~vi~~~-~~~~~~~~~~l----G-a~~~i~~~~~~~--~~~~~ 213 (321)
T 3tqh_A 144 ALNQAEVKQGDVVLIHAGAGGVGHLAIQLAK-Q-KGTTVITTA-SKRNHAFLKAL----G-AEQCINYHEEDF--LLAIS 213 (321)
T ss_dssp HHHHTTCCTTCEEEESSTTSHHHHHHHHHHH-H-TTCEEEEEE-CHHHHHHHHHH----T-CSEEEETTTSCH--HHHCC
T ss_pred HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHH-H-cCCEEEEEe-ccchHHHHHHc----C-CCEEEeCCCcch--hhhhc
Confidence 33333458899999997 9999999999998 3 578999998 55557776654 4 111122212220 22334
Q ss_pred CCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 201 GEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 201 ~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
..+|+||.+... . .+..+.+.|++||+++...
T Consensus 214 ~g~D~v~d~~g~-------~-~~~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 214 TPVDAVIDLVGG-------D-VGIQSIDCLKETGCIVSVP 245 (321)
T ss_dssp SCEEEEEESSCH-------H-HHHHHGGGEEEEEEEEECC
T ss_pred cCCCEEEECCCc-------H-HHHHHHHhccCCCEEEEeC
Confidence 689999987653 2 3378899999999999765
No 326
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=97.81 E-value=2.6e-05 Score=71.54 Aligned_cols=104 Identities=17% Similarity=0.138 Sum_probs=70.4
Q ss_pred HHHhhccC-CCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC
Q 039591 122 ILKENGVV-QPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL 200 (284)
Q Consensus 122 ~l~~~~~~-~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l 200 (284)
.+.+.... ++++||.+|+|++|..++.+|+ . .|++|+++|.+++..+.+++. +| ....+-..+........
T Consensus 178 al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~-~-~Ga~Vi~~~~~~~~~~~~~~~---lG---a~~v~~~~~~~~~~~~~ 249 (366)
T 1yqd_A 178 PLKYFGLDEPGKHIGIVGLGGLGHVAVKFAK-A-FGSKVTVISTSPSKKEEALKN---FG---ADSFLVSRDQEQMQAAA 249 (366)
T ss_dssp HHHHTTCCCTTCEEEEECCSHHHHHHHHHHH-H-TTCEEEEEESCGGGHHHHHHT---SC---CSEEEETTCHHHHHHTT
T ss_pred HHHhcCcCCCCCEEEEECCCHHHHHHHHHHH-H-CCCEEEEEeCCHHHHHHHHHh---cC---CceEEeccCHHHHHHhh
Confidence 34444445 8999999999999999999998 3 578999999999988877632 23 11111112211111112
Q ss_pred CCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 201 GEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 201 ~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+.+|+||.+.... ..++.+.+.|++||+++..+
T Consensus 250 ~~~D~vid~~g~~-------~~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 250 GTLDGIIDTVSAV-------HPLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp TCEEEEEECCSSC-------CCSHHHHHHEEEEEEEEECC
T ss_pred CCCCEEEECCCcH-------HHHHHHHHHHhcCCEEEEEc
Confidence 5799999886542 12456678899999998765
No 327
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=97.81 E-value=6.9e-05 Score=67.22 Aligned_cols=90 Identities=11% Similarity=0.128 Sum_probs=66.2
Q ss_pred eEEEecC-CCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC--CCccEEEEc
Q 039591 133 KVAFVGS-GPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL--GEYDCIFLA 209 (284)
Q Consensus 133 ~VL~iGs-Gp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l--~~fD~V~~~ 209 (284)
+||..|+ |++|..++.+|+ . .|++|++++.+++..+.++++ | . + ..+-..+... ...+ +.+|+||.+
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~-~-~Ga~Vi~~~~~~~~~~~~~~l----G-a-~-~vi~~~~~~~-~~~~~~~~~d~v~d~ 218 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLH-K-LGYQVAAVSGRESTHGYLKSL----G-A-N-RILSRDEFAE-SRPLEKQLWAGAIDT 218 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHH-H-TTCCEEEEESCGGGHHHHHHH----T-C-S-EEEEGGGSSC-CCSSCCCCEEEEEES
T ss_pred eEEEECCCcHHHHHHHHHHH-H-cCCEEEEEeCCHHHHHHHHhc----C-C-C-EEEecCCHHH-HHhhcCCCccEEEEC
Confidence 4999998 999999999998 3 577999999999999999875 3 1 1 1111122111 1122 579999987
Q ss_pred CcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 210 ALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 210 ~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
... ..++.+.+.|++||+++..+
T Consensus 219 ~g~--------~~~~~~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 219 VGD--------KVLAKVLAQMNYGGCVAACG 241 (324)
T ss_dssp SCH--------HHHHHHHHTEEEEEEEEECC
T ss_pred CCc--------HHHHHHHHHHhcCCEEEEEe
Confidence 542 37889999999999999875
No 328
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=97.80 E-value=1.8e-05 Score=65.94 Aligned_cols=99 Identities=12% Similarity=0.093 Sum_probs=66.8
Q ss_pred cCCCCeEEEec-CCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhcc-C--CCc
Q 039591 128 VVQPKKVAFVG-SGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEK-L--GEY 203 (284)
Q Consensus 128 ~~~~~~VL~iG-sGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~-l--~~f 203 (284)
.+++++||..| +|++|..+..+++ ..|++|+++|.+++..+.+++. | ....+.....+..+...+ . +.+
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~--~~G~~V~~~~~~~~~~~~~~~~----g-~~~~~d~~~~~~~~~~~~~~~~~~~ 108 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAK--MIGARIYTTAGSDAKREMLSRL----G-VEYVGDSRSVDFADEILELTDGYGV 108 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHH--HHTCEEEEEESSHHHHHHHHTT----C-CSEEEETTCSTHHHHHHHHTTTCCE
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHH--HcCCEEEEEeCCHHHHHHHHHc----C-CCEEeeCCcHHHHHHHHHHhCCCCC
Confidence 47789999999 5768888888877 2578999999999988776542 3 111111111222221111 1 469
Q ss_pred cEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEec
Q 039591 204 DCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 204 D~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
|+|+.++. ...++.+.+.|+|||+++..+.
T Consensus 109 D~vi~~~g--------~~~~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 109 DVVLNSLA--------GEAIQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp EEEEECCC--------THHHHHHHHTEEEEEEEEECSC
T ss_pred eEEEECCc--------hHHHHHHHHHhccCCEEEEEcC
Confidence 99998764 2467888899999999998764
No 329
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=97.79 E-value=2.5e-05 Score=71.02 Aligned_cols=105 Identities=20% Similarity=0.210 Sum_probs=72.1
Q ss_pred HHHhhccCCCCeEEEecC-CCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEE-Ecchhhhhcc
Q 039591 122 ILKENGVVQPKKVAFVGS-GPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFL-TGDILQVKEK 199 (284)
Q Consensus 122 ~l~~~~~~~~~~VL~iGs-Gp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~-~~D~~~~~~~ 199 (284)
.+.+....++++||.+|+ |++|..++.+++ ..|++|+++|.+++..+.++++ | ....+.+. ..++.+....
T Consensus 161 ~l~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~--~~Ga~V~~~~~~~~~~~~~~~~----g-~~~~~d~~~~~~~~~~~~~ 233 (347)
T 2hcy_A 161 ALKSANLMAGHWVAISGAAGGLGSLAVQYAK--AMGYRVLGIDGGEGKEELFRSI----G-GEVFIDFTKEKDIVGAVLK 233 (347)
T ss_dssp HHHTTTCCTTCEEEEETTTSHHHHHHHHHHH--HTTCEEEEEECSTTHHHHHHHT----T-CCEEEETTTCSCHHHHHHH
T ss_pred HHHhcCCCCCCEEEEECCCchHHHHHHHHHH--HCCCcEEEEcCCHHHHHHHHHc----C-CceEEecCccHhHHHHHHH
Confidence 333344478899999998 778988888887 2578999999999988877653 3 11111111 1222222111
Q ss_pred C--CCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 200 L--GEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 200 l--~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
. +.+|+|+.+... ...++.+.+.|++||+++..+
T Consensus 234 ~~~~~~D~vi~~~g~-------~~~~~~~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 234 ATDGGAHGVINVSVS-------EAAIEASTRYVRANGTTVLVG 269 (347)
T ss_dssp HHTSCEEEEEECSSC-------HHHHHHHTTSEEEEEEEEECC
T ss_pred HhCCCCCEEEECCCc-------HHHHHHHHHHHhcCCEEEEEe
Confidence 1 379999988764 467889999999999998765
No 330
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=97.79 E-value=2.2e-05 Score=71.39 Aligned_cols=106 Identities=16% Similarity=0.180 Sum_probs=72.8
Q ss_pred HHHhhccCCCCeEEEecCC-CChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC
Q 039591 122 ILKENGVVQPKKVAFVGSG-PMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL 200 (284)
Q Consensus 122 ~l~~~~~~~~~~VL~iGsG-p~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l 200 (284)
.+.+...+++++||..|+| ++|..++.+++ ...|++|+++|.+++..+.++++ | ....+.....+..+...++
T Consensus 162 ~l~~~~~~~g~~vlV~Gagg~iG~~~~~~a~-~~~Ga~Vi~~~~~~~~~~~~~~~----g-~~~~~~~~~~~~~~~~~~~ 235 (347)
T 1jvb_A 162 AVRKASLDPTKTLLVVGAGGGLGTMAVQIAK-AVSGATIIGVDVREEAVEAAKRA----G-ADYVINASMQDPLAEIRRI 235 (347)
T ss_dssp HHHHTTCCTTCEEEEETTTSHHHHHHHHHHH-HHTCCEEEEEESSHHHHHHHHHH----T-CSEEEETTTSCHHHHHHHH
T ss_pred HHHhcCCCCCCEEEEECCCccHHHHHHHHHH-HcCCCeEEEEcCCHHHHHHHHHh----C-CCEEecCCCccHHHHHHHH
Confidence 3333345788999999998 88888888887 32278999999999999888764 3 1111111111221111111
Q ss_pred ---CCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 201 ---GEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 201 ---~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+.+|+||.++.. ...++.+.+.|++||+++..+
T Consensus 236 ~~~~~~d~vi~~~g~-------~~~~~~~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 236 TESKGVDAVIDLNNS-------EKTLSVYPKALAKQGKYVMVG 271 (347)
T ss_dssp TTTSCEEEEEESCCC-------HHHHTTGGGGEEEEEEEEECC
T ss_pred hcCCCceEEEECCCC-------HHHHHHHHHHHhcCCEEEEEC
Confidence 479999988765 457888999999999998865
No 331
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=97.78 E-value=3.4e-05 Score=70.08 Aligned_cols=95 Identities=11% Similarity=0.044 Sum_probs=69.3
Q ss_pred cCCCCeEEEec-CCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC---CCc
Q 039591 128 VVQPKKVAFVG-SGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL---GEY 203 (284)
Q Consensus 128 ~~~~~~VL~iG-sGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l---~~f 203 (284)
.+++++||.+| +|++|+.++.+++ ..|++|+++ .+++..+.++++ | ... +. ...|..+...+. ..+
T Consensus 148 ~~~g~~VlV~Ga~g~iG~~~~q~a~--~~Ga~Vi~~-~~~~~~~~~~~l----G-a~~-i~-~~~~~~~~~~~~~~~~g~ 217 (343)
T 3gaz_A 148 VQDGQTVLIQGGGGGVGHVAIQIAL--ARGARVFAT-ARGSDLEYVRDL----G-ATP-ID-ASREPEDYAAEHTAGQGF 217 (343)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHH--HTTCEEEEE-ECHHHHHHHHHH----T-SEE-EE-TTSCHHHHHHHHHTTSCE
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHH--HCCCEEEEE-eCHHHHHHHHHc----C-CCE-ec-cCCCHHHHHHHHhcCCCc
Confidence 47889999999 7999999999998 357899999 899998888765 3 112 32 222332222111 479
Q ss_pred cEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 204 DCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 204 D~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|+||.+... ..+..+.+.|++||+++...
T Consensus 218 D~vid~~g~--------~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 218 DLVYDTLGG--------PVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp EEEEESSCT--------HHHHHHHHHEEEEEEEEESC
T ss_pred eEEEECCCc--------HHHHHHHHHHhcCCeEEEEc
Confidence 999987652 46778888999999999765
No 332
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=97.78 E-value=2.7e-05 Score=71.26 Aligned_cols=99 Identities=13% Similarity=0.058 Sum_probs=69.2
Q ss_pred hccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC---CC
Q 039591 126 NGVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL---GE 202 (284)
Q Consensus 126 ~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l---~~ 202 (284)
...+++++||.+|+|++|+.++.+|+ ..+|++|+++|.+++..+.++++ | .+.-+..... ..+...++ ..
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak-~~~Ga~Vi~~~~~~~~~~~~~~l----G-a~~vi~~~~~-~~~~v~~~~~g~g 254 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLK-VMTPATVIALDVKEEKLKLAERL----G-ADHVVDARRD-PVKQVMELTRGRG 254 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHH-HHCCCEEEEEESSHHHHHHHHHT----T-CSEEEETTSC-HHHHHHHHTTTCC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHH-HcCCCeEEEEeCCHHHHHHHHHh----C-CCEEEeccch-HHHHHHHHhCCCC
Confidence 34578899999999999999999998 43378999999999999998764 3 1111221111 11111111 37
Q ss_pred ccEEEEcCcCCCCHHHHHH--HHHHHHhccccCcEEEEEe
Q 039591 203 YDCIFLAALVGMSKEEKMK--IIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 203 fD~V~~~~~~~~~~~~k~~--~l~~~~~~L~pGG~lv~~~ 240 (284)
+|+||.+... .. .++.+.+. +||+++..+
T Consensus 255 ~Dvvid~~G~-------~~~~~~~~~~~~--~~G~~v~~g 285 (359)
T 1h2b_A 255 VNVAMDFVGS-------QATVDYTPYLLG--RMGRLIIVG 285 (359)
T ss_dssp EEEEEESSCC-------HHHHHHGGGGEE--EEEEEEECC
T ss_pred CcEEEECCCC-------chHHHHHHHhhc--CCCEEEEEe
Confidence 9999988764 33 67777766 999998765
No 333
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=97.77 E-value=2.9e-05 Score=71.35 Aligned_cols=97 Identities=10% Similarity=0.053 Sum_probs=69.9
Q ss_pred CCCCeEEEecC-CCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC--CCccE
Q 039591 129 VQPKKVAFVGS-GPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL--GEYDC 205 (284)
Q Consensus 129 ~~~~~VL~iGs-Gp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l--~~fD~ 205 (284)
.++++||.+|+ |++|..++.+|+ ..|++|+++. +++..+.++++ | .+.-+.+...|..+...++ +.+|+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~--~~Ga~Vi~~~-~~~~~~~~~~l----G-a~~vi~~~~~~~~~~v~~~t~g~~d~ 234 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLR--LSGYIPIATC-SPHNFDLAKSR----G-AEEVFDYRAPNLAQTIRTYTKNNLRY 234 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHH--HTTCEEEEEE-CGGGHHHHHHT----T-CSEEEETTSTTHHHHHHHHTTTCCCE
T ss_pred CCCcEEEEECCCcHHHHHHHHHHH--HCCCEEEEEe-CHHHHHHHHHc----C-CcEEEECCCchHHHHHHHHccCCccE
Confidence 67899999999 889999999998 3578999885 88888888765 3 1122332233433322222 46999
Q ss_pred EEEcCcCCCCHHHHHHHHHHHHhcc-ccCcEEEEEe
Q 039591 206 IFLAALVGMSKEEKMKIIRHIRKYM-KDGGILLVRS 240 (284)
Q Consensus 206 V~~~~~~~~~~~~k~~~l~~~~~~L-~pGG~lv~~~ 240 (284)
||.+... ...++.+.+.| ++||+++..+
T Consensus 235 v~d~~g~-------~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 235 ALDCITN-------VESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp EEESSCS-------HHHHHHHHHHSCTTCEEEEESS
T ss_pred EEECCCc-------hHHHHHHHHHhhcCCCEEEEEe
Confidence 9988765 46778888889 6999998765
No 334
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=97.76 E-value=2.1e-05 Score=71.42 Aligned_cols=97 Identities=13% Similarity=0.079 Sum_probs=69.7
Q ss_pred cCCCCeEEEecC-CCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC---CCc
Q 039591 128 VVQPKKVAFVGS-GPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL---GEY 203 (284)
Q Consensus 128 ~~~~~~VL~iGs-Gp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l---~~f 203 (284)
.+++++||..|+ |++|..++.+++ ..|++|++++.+++..+.++++ | ...-+... .|..+...+. ..+
T Consensus 157 ~~~g~~VlV~Gasg~iG~~~~~~a~--~~Ga~Vi~~~~~~~~~~~~~~~----g-a~~v~~~~-~~~~~~v~~~~~~~g~ 228 (342)
T 4eye_A 157 LRAGETVLVLGAAGGIGTAAIQIAK--GMGAKVIAVVNRTAATEFVKSV----G-ADIVLPLE-EGWAKAVREATGGAGV 228 (342)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHH--HTTCEEEEEESSGGGHHHHHHH----T-CSEEEESS-TTHHHHHHHHTTTSCE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHH--HcCCEEEEEeCCHHHHHHHHhc----C-CcEEecCc-hhHHHHHHHHhCCCCc
Confidence 478899999998 889999999998 3578999999999999988875 3 11112221 3333222221 369
Q ss_pred cEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 204 DCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 204 D~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|+||.+... ..++.+.+.|++||+++..+
T Consensus 229 Dvvid~~g~--------~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 229 DMVVDPIGG--------PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp EEEEESCC----------CHHHHHHTEEEEEEEEEC-
T ss_pred eEEEECCch--------hHHHHHHHhhcCCCEEEEEE
Confidence 999988764 25678889999999999865
No 335
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=97.75 E-value=1.7e-05 Score=71.97 Aligned_cols=98 Identities=7% Similarity=-0.030 Sum_probs=68.2
Q ss_pred cCCCCeEEEecCC-CChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC---CCc
Q 039591 128 VVQPKKVAFVGSG-PMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL---GEY 203 (284)
Q Consensus 128 ~~~~~~VL~iGsG-p~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l---~~f 203 (284)
.+++++||.+|+| ++|..++.+++ ..|++|+++|.+++..+.++++ | ....+.....|..+...++ ..+
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~--~~Ga~Vi~~~~~~~~~~~~~~l----g-a~~~~~~~~~~~~~~~~~~~~~~g~ 214 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQ--ILNFRLIAVTRNNKHTEELLRL----G-AAYVIDTSTAPLYETVMELTNGIGA 214 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHH--HHTCEEEEEESSSTTHHHHHHH----T-CSEEEETTTSCHHHHHHHHTTTSCE
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHH--HcCCEEEEEeCCHHHHHHHHhC----C-CcEEEeCCcccHHHHHHHHhCCCCC
Confidence 4788999999987 78999999988 3578999999999999998875 3 1111221122332222111 479
Q ss_pred cEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 204 DCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 204 D~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|+||.+... .. .....+.|++||+++..+
T Consensus 215 Dvvid~~g~-------~~-~~~~~~~l~~~G~iv~~G 243 (340)
T 3gms_A 215 DAAIDSIGG-------PD-GNELAFSLRPNGHFLTIG 243 (340)
T ss_dssp EEEEESSCH-------HH-HHHHHHTEEEEEEEEECC
T ss_pred cEEEECCCC-------hh-HHHHHHHhcCCCEEEEEe
Confidence 999988764 22 234458999999999876
No 336
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=97.75 E-value=2.3e-05 Score=71.48 Aligned_cols=98 Identities=12% Similarity=0.093 Sum_probs=70.4
Q ss_pred cCCCCeEEEe-cCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhcc--CCCcc
Q 039591 128 VVQPKKVAFV-GSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEK--LGEYD 204 (284)
Q Consensus 128 ~~~~~~VL~i-GsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~--l~~fD 204 (284)
.+++++||.+ |+|++|..++.+++ ..|++|+++|.+++..+.++++ | ....+.....|..+...+ -+.+|
T Consensus 165 ~~~g~~VlV~Gg~g~iG~~~~~~a~--~~Ga~Vi~~~~~~~~~~~~~~l----G-a~~~~~~~~~~~~~~~~~~~~~g~D 237 (353)
T 4dup_A 165 LTEGESVLIHGGTSGIGTTAIQLAR--AFGAEVYATAGSTGKCEACERL----G-AKRGINYRSEDFAAVIKAETGQGVD 237 (353)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHH--HTTCEEEEEESSHHHHHHHHHH----T-CSEEEETTTSCHHHHHHHHHSSCEE
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHH--HcCCEEEEEeCCHHHHHHHHhc----C-CCEEEeCCchHHHHHHHHHhCCCce
Confidence 4788999999 67889999999998 3578999999999999998875 3 111121112222221111 25799
Q ss_pred EEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 205 CIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 205 ~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+||.+... ..+..+.+.|++||+++..+
T Consensus 238 vvid~~g~--------~~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 238 IILDMIGA--------AYFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp EEEESCCG--------GGHHHHHHTEEEEEEEEECC
T ss_pred EEEECCCH--------HHHHHHHHHhccCCEEEEEE
Confidence 99988753 25677889999999998865
No 337
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=97.75 E-value=2.8e-05 Score=71.50 Aligned_cols=99 Identities=15% Similarity=0.143 Sum_probs=68.4
Q ss_pred cCCCCeEEEec-CCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEE
Q 039591 128 VVQPKKVAFVG-SGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCI 206 (284)
Q Consensus 128 ~~~~~~VL~iG-sGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V 206 (284)
.+++++||..| +|++|..++.+|+ . .|++|++++ +++..+.++++ | .+.-+.....|..+...+...+|+|
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~-~-~Ga~Vi~~~-~~~~~~~~~~l----G-a~~v~~~~~~~~~~~~~~~~g~D~v 252 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMK-A-WDAHVTAVC-SQDASELVRKL----G-ADDVIDYKSGSVEEQLKSLKPFDFI 252 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHH-H-TTCEEEEEE-CGGGHHHHHHT----T-CSEEEETTSSCHHHHHHTSCCBSEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHH-h-CCCEEEEEe-ChHHHHHHHHc----C-CCEEEECCchHHHHHHhhcCCCCEE
Confidence 46789999999 7999999999998 3 568999999 77777776543 3 1111221122333222233679999
Q ss_pred EEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 207 FLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 207 ~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|.+.... ...+....+.+++||+++..+
T Consensus 253 id~~g~~------~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 253 LDNVGGS------TETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp EESSCTT------HHHHGGGGBCSSSCCEEEESC
T ss_pred EECCCCh------hhhhHHHHHhhcCCcEEEEeC
Confidence 9886541 235677889999999998765
No 338
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=97.74 E-value=2.8e-05 Score=69.64 Aligned_cols=91 Identities=14% Similarity=0.135 Sum_probs=65.3
Q ss_pred ccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEE
Q 039591 127 GVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCI 206 (284)
Q Consensus 127 ~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V 206 (284)
..+++++||.+|+|++|..++.+|+ . .|++|++++ +++..+.++++ | . + .++ .| .+.. -+.+|+|
T Consensus 139 ~~~~g~~VlV~GaG~vG~~a~qlak-~-~Ga~Vi~~~-~~~~~~~~~~l----G-a-~--~v~-~d-~~~v--~~g~Dvv 203 (315)
T 3goh_A 139 PLTKQREVLIVGFGAVNNLLTQMLN-N-AGYVVDLVS-ASLSQALAAKR----G-V-R--HLY-RE-PSQV--TQKYFAI 203 (315)
T ss_dssp CCCSCCEEEEECCSHHHHHHHHHHH-H-HTCEEEEEC-SSCCHHHHHHH----T-E-E--EEE-SS-GGGC--CSCEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHH-H-cCCEEEEEE-ChhhHHHHHHc----C-C-C--EEE-cC-HHHh--CCCccEE
Confidence 3478999999999999999999998 3 577999999 99999998875 3 1 1 112 24 2211 2689999
Q ss_pred EEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 207 FLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 207 ~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|.+... ..+..+.+.|++||+++...
T Consensus 204 ~d~~g~--------~~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 204 FDAVNS--------QNAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp ECC---------------TTGGGEEEEEEEEEEC
T ss_pred EECCCc--------hhHHHHHHHhcCCCEEEEEe
Confidence 977543 12356789999999998864
No 339
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=97.70 E-value=3.6e-05 Score=69.24 Aligned_cols=97 Identities=11% Similarity=0.091 Sum_probs=65.9
Q ss_pred cCCCC-eEEEecC-CCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC--CCc
Q 039591 128 VVQPK-KVAFVGS-GPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL--GEY 203 (284)
Q Consensus 128 ~~~~~-~VL~iGs-Gp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l--~~f 203 (284)
..+++ +||.+|+ |++|..++.+|+ . .|++|++++.+++..+.++++ | ...-+.....+ .+....+ +.+
T Consensus 146 ~~~g~~~VlV~Ga~G~vG~~~~q~a~-~-~Ga~vi~~~~~~~~~~~~~~l----G-a~~~i~~~~~~-~~~~~~~~~~~~ 217 (328)
T 1xa0_A 146 LTPERGPVLVTGATGGVGSLAVSMLA-K-RGYTVEASTGKAAEHDYLRVL----G-AKEVLAREDVM-AERIRPLDKQRW 217 (328)
T ss_dssp CCGGGCCEEESSTTSHHHHHHHHHHH-H-TTCCEEEEESCTTCHHHHHHT----T-CSEEEECC----------CCSCCE
T ss_pred CCCCCceEEEecCCCHHHHHHHHHHH-H-CCCEEEEEECCHHHHHHHHHc----C-CcEEEecCCcH-HHHHHHhcCCcc
Confidence 35564 8999997 989999999998 3 578999999999999888764 3 11112211111 1111112 479
Q ss_pred cEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 204 DCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 204 D~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|+||.+... ..++.+.+.+++||+++..+
T Consensus 218 d~vid~~g~--------~~~~~~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 218 AAAVDPVGG--------RTLATVLSRMRYGGAVAVSG 246 (328)
T ss_dssp EEEEECSTT--------TTHHHHHHTEEEEEEEEECS
T ss_pred cEEEECCcH--------HHHHHHHHhhccCCEEEEEe
Confidence 999987653 24677888999999998865
No 340
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.69 E-value=1.5e-05 Score=70.41 Aligned_cols=110 Identities=10% Similarity=0.110 Sum_probs=65.9
Q ss_pred hhccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCC-eEEEEc-chhhhhccCCC
Q 039591 125 ENGVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKR-MKFLTG-DILQVKEKLGE 202 (284)
Q Consensus 125 ~~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~-v~~~~~-D~~~~~~~l~~ 202 (284)
+....++.+|||+||||.|.+-..+.+ .+...|+++|+...+...+... ... ..+ +.+... |+.++ .-.+
T Consensus 85 K~~Lk~~~~VLDLGaAPGGWsQvAa~~--~gv~sV~GvdvG~d~~~~pi~~-~~~---g~~ii~~~~~~dv~~l--~~~~ 156 (282)
T 3gcz_A 85 RGYVKPTGIVVDLGCGRGGWSYYAASL--KNVKKVMAFTLGVQGHEKPIMR-TTL---GWNLIRFKDKTDVFNM--EVIP 156 (282)
T ss_dssp TTSCCCCEEEEEETCTTCHHHHHHHTS--TTEEEEEEECCCCTTSCCCCCC-CBT---TGGGEEEECSCCGGGS--CCCC
T ss_pred hcCCCCCCEEEEeCCCCCHHHHHHHHh--cCCCeeeeEEeccCcccccccc-ccC---CCceEEeeCCcchhhc--CCCC
Confidence 344578889999999987765544433 3555799999976532222110 111 123 333322 44322 2278
Q ss_pred ccEEEEcCcC--CCCHHHH---HHHHHHHHhccccC--cEEEEEecc
Q 039591 203 YDCIFLAALV--GMSKEEK---MKIIRHIRKYMKDG--GILLVRSAK 242 (284)
Q Consensus 203 fD~V~~~~~~--~~~~~~k---~~~l~~~~~~L~pG--G~lv~~~~~ 242 (284)
+|+|+++... |...-|. ..+++-+.++|+|| |.+++.-..
T Consensus 157 ~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 157 GDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp CSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred cCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 9999998543 2222222 24677778999999 999987644
No 341
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.66 E-value=0.00011 Score=66.58 Aligned_cols=82 Identities=20% Similarity=0.111 Sum_probs=62.4
Q ss_pred HhhccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhc---cC
Q 039591 124 KENGVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKE---KL 200 (284)
Q Consensus 124 ~~~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~---~l 200 (284)
..+...++..++|..+| .|-.+..++++..+.++|+++|+||++++.|+++ . ..+++++.++..++.. +.
T Consensus 51 ~~L~i~pggiyVD~TlG-~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~rL----~--~~Rv~lv~~nF~~l~~~L~~~ 123 (347)
T 3tka_A 51 NGLNIRPDGIYIDGTFG-RGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKTI----D--DPRFSIIHGPFSALGEYVAER 123 (347)
T ss_dssp HHTCCCTTCEEEESCCT-TSHHHHHHHTTCCTTCEEEEEESCHHHHHHHTTC----C--CTTEEEEESCGGGHHHHHHHT
T ss_pred HhhCCCCCCEEEEeCcC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhh----c--CCcEEEEeCCHHHHHHHHHhc
Confidence 33445788999999999 7777777777345788999999999999999532 1 3789999999877532 22
Q ss_pred ---CCccEEEEcCcC
Q 039591 201 ---GEYDCIFLAALV 212 (284)
Q Consensus 201 ---~~fD~V~~~~~~ 212 (284)
+++|.|+.+-++
T Consensus 124 g~~~~vDgILfDLGV 138 (347)
T 3tka_A 124 DLIGKIDGILLDLGV 138 (347)
T ss_dssp TCTTCEEEEEEECSC
T ss_pred CCCCcccEEEECCcc
Confidence 269999976544
No 342
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=97.65 E-value=3.7e-05 Score=72.65 Aligned_cols=98 Identities=12% Similarity=0.038 Sum_probs=70.3
Q ss_pred cCCCCeEEEecC-CCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcch-------------
Q 039591 128 VVQPKKVAFVGS-GPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDI------------- 193 (284)
Q Consensus 128 ~~~~~~VL~iGs-Gp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~------------- 193 (284)
.+++++||.+|+ |++|+.++.+|+ ..|++|++++.+++.++.++++ | ....+.....|.
T Consensus 226 ~~~g~~VlV~GasG~vG~~avqlak--~~Ga~vi~~~~~~~~~~~~~~l----G-a~~vi~~~~~d~~~~~~~~~~~~~~ 298 (456)
T 3krt_A 226 MKQGDNVLIWGASGGLGSYATQFAL--AGGANPICVVSSPQKAEICRAM----G-AEAIIDRNAEGYRFWKDENTQDPKE 298 (456)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHH--HTTCEEEEEESSHHHHHHHHHH----T-CCEEEETTTTTCCSEEETTEECHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHH--HcCCeEEEEECCHHHHHHHHhh----C-CcEEEecCcCcccccccccccchHH
Confidence 478899999998 999999999998 3678999999999999999775 3 111111111111
Q ss_pred ----hhhhccC---CCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 194 ----LQVKEKL---GEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 194 ----~~~~~~l---~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.+...++ ..+|+||.+.. ...+..+.+.|++||+++..+
T Consensus 299 ~~~~~~~i~~~t~g~g~Dvvid~~G--------~~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 299 WKRFGKRIRELTGGEDIDIVFEHPG--------RETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp HHHHHHHHHHHHTSCCEEEEEECSC--------HHHHHHHHHHEEEEEEEEESC
T ss_pred HHHHHHHHHHHhCCCCCcEEEEcCC--------chhHHHHHHHhhCCcEEEEEe
Confidence 0111111 47999998765 246788889999999999865
No 343
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.63 E-value=0.00045 Score=61.95 Aligned_cols=132 Identities=18% Similarity=0.194 Sum_probs=81.4
Q ss_pred CCCCeEEEecCCCChHHHHHHHh---hcCCCcE--EEEEeCCH---------HHHHHHHHHHhhccCC-CC--CeEEEEc
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAK---NHLKATH--FDNFDIDE---------AANNVARRIVATDFEF-EK--RMKFLTG 191 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~---~~~~~~~--V~~vDis~---------~~~~~A~~~~~~~~~l-~~--~v~~~~~ 191 (284)
.+.-+|||+|-| +|+..+...+ +..+..+ ++.+|.++ ...+..+......... .. ..++..|
T Consensus 95 ~~~~~IlE~GFG-TGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~G 173 (308)
T 3vyw_A 95 RKVIRILDVGFG-LGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLG 173 (308)
T ss_dssp CSEEEEEEECCT-TSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEES
T ss_pred CCCcEEEEeCCC-ccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEec
Confidence 344589999999 9998654321 1235544 57777532 1222333333321100 12 3578889
Q ss_pred chhhhhccC--CCccEEEEcCcCCCCHHH--HHHHHHHHHhccccCcEEEEEeccch-hhhcCCCCCCCCCCCcEEEEEE
Q 039591 192 DILQVKEKL--GEYDCIFLAALVGMSKEE--KMKIIRHIRKYMKDGGILLVRSAKGA-RAFLYPVVERHDLLDFEVLSIF 266 (284)
Q Consensus 192 D~~~~~~~l--~~fD~V~~~~~~~~~~~~--k~~~l~~~~~~L~pGG~lv~~~~~g~-~~~lyp~v~~~~l~gf~~~~~~ 266 (284)
|+.+....+ ..||+||.|+....-.++ -.++++.++++++|||+++.-++.|. |.-+ .-.||++-.+-
T Consensus 174 Da~~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laTYtaag~VRR~L-------~~aGF~V~k~~ 246 (308)
T 3vyw_A 174 DARKRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVSYSSSLSVRKSL-------LTLGFKVGSSR 246 (308)
T ss_dssp CHHHHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEESCCCHHHHHHH-------HHTTCEEEEEE
T ss_pred hHHHHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEEEeCcHHHHHHH-------HHCCCEEEecC
Confidence 999877666 369999999864211111 17899999999999999998776553 3332 23688876554
Q ss_pred cC
Q 039591 267 HP 268 (284)
Q Consensus 267 ~p 268 (284)
-+
T Consensus 247 G~ 248 (308)
T 3vyw_A 247 EI 248 (308)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 344
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=97.63 E-value=4.5e-05 Score=68.69 Aligned_cols=96 Identities=13% Similarity=0.104 Sum_probs=67.5
Q ss_pred cCCCC-eEEEecC-CCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcch-hhhhccC--CC
Q 039591 128 VVQPK-KVAFVGS-GPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDI-LQVKEKL--GE 202 (284)
Q Consensus 128 ~~~~~-~VL~iGs-Gp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~-~~~~~~l--~~ 202 (284)
.++++ +||..|+ |++|..++.+|+. .|++|++++.+++..+.++++ | . +. .+-..+. .+....+ +.
T Consensus 147 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~--~Ga~vi~~~~~~~~~~~~~~l----G-a-~~-v~~~~~~~~~~~~~~~~~~ 217 (330)
T 1tt7_A 147 LSPEKGSVLVTGATGGVGGIAVSMLNK--RGYDVVASTGNREAADYLKQL----G-A-SE-VISREDVYDGTLKALSKQQ 217 (330)
T ss_dssp CCGGGCCEEEESTTSHHHHHHHHHHHH--HTCCEEEEESSSSTHHHHHHH----T-C-SE-EEEHHHHCSSCCCSSCCCC
T ss_pred cCCCCceEEEECCCCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHc----C-C-cE-EEECCCchHHHHHHhhcCC
Confidence 35565 8999997 9999999999983 468899999999998888764 3 1 11 1111111 1111112 46
Q ss_pred ccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 203 YDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 203 fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+|+||.+... ..+..+.+.+++||+++..+
T Consensus 218 ~d~vid~~g~--------~~~~~~~~~l~~~G~iv~~G 247 (330)
T 1tt7_A 218 WQGAVDPVGG--------KQLASLLSKIQYGGSVAVSG 247 (330)
T ss_dssp EEEEEESCCT--------HHHHHHHTTEEEEEEEEECC
T ss_pred ccEEEECCcH--------HHHHHHHHhhcCCCEEEEEe
Confidence 9999988653 35788889999999998765
No 345
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=97.62 E-value=7.3e-05 Score=67.37 Aligned_cols=98 Identities=19% Similarity=0.222 Sum_probs=68.1
Q ss_pred cCCCCeEEEecC-CCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEE-cchhhhhccC--CCc
Q 039591 128 VVQPKKVAFVGS-GPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLT-GDILQVKEKL--GEY 203 (284)
Q Consensus 128 ~~~~~~VL~iGs-Gp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~-~D~~~~~~~l--~~f 203 (284)
..++++||..|+ |++|..++.+++ ..|++|+++|.+++..+.++++ | ....+.... .++.+..... +.+
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~~~--~~G~~V~~~~~~~~~~~~~~~~----g-~~~~~d~~~~~~~~~~~~~~~~~~~ 215 (333)
T 1v3u_A 143 VKGGETVLVSAAAGAVGSVVGQIAK--LKGCKVVGAAGSDEKIAYLKQI----G-FDAAFNYKTVNSLEEALKKASPDGY 215 (333)
T ss_dssp CCSSCEEEEESTTBHHHHHHHHHHH--HTTCEEEEEESSHHHHHHHHHT----T-CSEEEETTSCSCHHHHHHHHCTTCE
T ss_pred CCCCCEEEEecCCCcHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHhc----C-CcEEEecCCHHHHHHHHHHHhCCCC
Confidence 478899999997 779988888887 3678999999999998887543 3 111111111 2222211111 579
Q ss_pred cEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 204 DCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 204 D~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|+++.++.. ..++.+.+.|++||+++..+
T Consensus 216 d~vi~~~g~--------~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 216 DCYFDNVGG--------EFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp EEEEESSCH--------HHHHHHHTTEEEEEEEEECC
T ss_pred eEEEECCCh--------HHHHHHHHHHhcCCEEEEEe
Confidence 999988753 34788889999999998765
No 346
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=97.61 E-value=6.5e-05 Score=68.11 Aligned_cols=98 Identities=13% Similarity=0.085 Sum_probs=69.0
Q ss_pred cCCCCeEEEecC-CCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhcc---CCCc
Q 039591 128 VVQPKKVAFVGS-GPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEK---LGEY 203 (284)
Q Consensus 128 ~~~~~~VL~iGs-Gp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~---l~~f 203 (284)
.+++++||.+|+ |++|..++.+++ ..|++|+++|.+++..+.++++ | ....+.....|..+...+ -..+
T Consensus 164 ~~~g~~vlV~Gasg~iG~~~~~~a~--~~G~~Vi~~~~~~~~~~~~~~~----g-a~~~~d~~~~~~~~~~~~~~~~~~~ 236 (343)
T 2eih_A 164 VRPGDDVLVMAAGSGVSVAAIQIAK--LFGARVIATAGSEDKLRRAKAL----G-ADETVNYTHPDWPKEVRRLTGGKGA 236 (343)
T ss_dssp CCTTCEEEECSTTSTTHHHHHHHHH--HTTCEEEEEESSHHHHHHHHHH----T-CSEEEETTSTTHHHHHHHHTTTTCE
T ss_pred CCCCCEEEEECCCchHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHhc----C-CCEEEcCCcccHHHHHHHHhCCCCc
Confidence 467899999998 889999999998 3578999999999999988764 3 111111111222221111 1479
Q ss_pred cEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 204 DCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 204 D~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|+|+.+.. + ..++.+.+.|++||+++..+
T Consensus 237 d~vi~~~g-~-------~~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 237 DKVVDHTG-A-------LYFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp EEEEESSC-S-------SSHHHHHHHEEEEEEEEESS
T ss_pred eEEEECCC-H-------HHHHHHHHhhccCCEEEEEe
Confidence 99998876 3 24677888999999998765
No 347
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=97.60 E-value=9.6e-05 Score=65.73 Aligned_cols=94 Identities=12% Similarity=0.042 Sum_probs=67.8
Q ss_pred cCCCCeEEEecC-CCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcch-hhhhccCCCccE
Q 039591 128 VVQPKKVAFVGS-GPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDI-LQVKEKLGEYDC 205 (284)
Q Consensus 128 ~~~~~~VL~iGs-Gp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~-~~~~~~l~~fD~ 205 (284)
.+++++||.+|+ |++|..++.+++ . .|++|+++|.+++..+.++++ | . +. ++..+- .+....++.+|+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~-~-~Ga~Vi~~~~~~~~~~~~~~~----g-a-~~--~~~~~~~~~~~~~~~~~d~ 192 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVAR-A-MGLRVLAAASRPEKLALPLAL----G-A-EE--AATYAEVPERAKAWGGLDL 192 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHH-H-TTCEEEEEESSGGGSHHHHHT----T-C-SE--EEEGGGHHHHHHHTTSEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHH-H-CCCEEEEEeCCHHHHHHHHhc----C-C-CE--EEECCcchhHHHHhcCceE
Confidence 578899999998 889999999998 3 577999999999998888653 3 1 21 122111 122222368999
Q ss_pred EEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 206 IFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 206 V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|+. ... ..++.+.+.|++||+++..+
T Consensus 193 vid-~g~--------~~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 193 VLE-VRG--------KEVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp EEE-CSC--------TTHHHHHTTEEEEEEEEEC-
T ss_pred EEE-CCH--------HHHHHHHHhhccCCEEEEEe
Confidence 998 543 24678889999999998765
No 348
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=97.57 E-value=9.1e-05 Score=67.54 Aligned_cols=98 Identities=13% Similarity=0.071 Sum_probs=68.2
Q ss_pred cCCCCeEEEecC-CCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhcc---CCCc
Q 039591 128 VVQPKKVAFVGS-GPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEK---LGEY 203 (284)
Q Consensus 128 ~~~~~~VL~iGs-Gp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~---l~~f 203 (284)
.+++++||..|+ |++|..++.+++ ..|++|+++|.+++..+.++++ | ....+.....+..+...+ -..+
T Consensus 168 ~~~g~~vlV~GasggiG~~~~~~a~--~~Ga~Vi~~~~~~~~~~~~~~~----g-a~~~~d~~~~~~~~~~~~~~~~~~~ 240 (351)
T 1yb5_A 168 VKAGESVLVHGASGGVGLAACQIAR--AYGLKILGTAGTEEGQKIVLQN----G-AHEVFNHREVNYIDKIKKYVGEKGI 240 (351)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHH--HTTCEEEEEESSHHHHHHHHHT----T-CSEEEETTSTTHHHHHHHHHCTTCE
T ss_pred CCCcCEEEEECCCChHHHHHHHHHH--HCCCEEEEEeCChhHHHHHHHc----C-CCEEEeCCCchHHHHHHHHcCCCCc
Confidence 478899999997 889999999888 3578999999999999877654 3 111111111222221111 1379
Q ss_pred cEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 204 DCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 204 D~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|+|+.++.. ..+..+.+.|++||+++..+
T Consensus 241 D~vi~~~G~--------~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 241 DIIIEMLAN--------VNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp EEEEESCHH--------HHHHHHHHHEEEEEEEEECC
T ss_pred EEEEECCCh--------HHHHHHHHhccCCCEEEEEe
Confidence 999988653 34677889999999998765
No 349
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=97.55 E-value=7.1e-05 Score=68.26 Aligned_cols=98 Identities=8% Similarity=-0.038 Sum_probs=68.3
Q ss_pred cCCCCeEEEec-CCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhcc---CCCc
Q 039591 128 VVQPKKVAFVG-SGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEK---LGEY 203 (284)
Q Consensus 128 ~~~~~~VL~iG-sGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~---l~~f 203 (284)
.+++++||..| +|++|..++.+++ ..|++|+++|.+++.++.++++ | ....+.....|..+...+ -+.+
T Consensus 160 ~~~g~~vlV~Ga~ggiG~~~~~~a~--~~Ga~Vi~~~~~~~~~~~~~~~----g-~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (354)
T 2j8z_A 160 VQAGDYVLIHAGLSGVGTAAIQLTR--MAGAIPLVTAGSQKKLQMAEKL----G-AAAGFNYKKEDFSEATLKFTKGAGV 232 (354)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHH--HTTCEEEEEESCHHHHHHHHHH----T-CSEEEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCCCEEEEECCccHHHHHHHHHHH--HcCCEEEEEeCCHHHHHHHHHc----C-CcEEEecCChHHHHHHHHHhcCCCc
Confidence 47889999999 6889999999888 3578999999999999888654 3 111111111122221111 1469
Q ss_pred cEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 204 DCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 204 D~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|+||.++.. ..+..+.+.|++||+++..+
T Consensus 233 d~vi~~~G~--------~~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 233 NLILDCIGG--------SYWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp EEEEESSCG--------GGHHHHHHHEEEEEEEEECC
T ss_pred eEEEECCCc--------hHHHHHHHhccCCCEEEEEe
Confidence 999988764 24667788999999999865
No 350
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=97.55 E-value=0.00013 Score=65.85 Aligned_cols=98 Identities=14% Similarity=0.134 Sum_probs=68.5
Q ss_pred cCCCCeEEEecC-CCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhcc---CCCc
Q 039591 128 VVQPKKVAFVGS-GPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEK---LGEY 203 (284)
Q Consensus 128 ~~~~~~VL~iGs-Gp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~---l~~f 203 (284)
.+++++||..|+ |++|..++.+++ . .|++|+++|.+++..+.++++ | ....+.....+..+...+ -..+
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~a~-~-~G~~Vi~~~~~~~~~~~~~~~----g-~~~~~d~~~~~~~~~i~~~~~~~~~ 215 (333)
T 1wly_A 143 VKPGDYVLIHAAAGGMGHIMVPWAR-H-LGATVIGTVSTEEKAETARKL----G-CHHTINYSTQDFAEVVREITGGKGV 215 (333)
T ss_dssp CCTTCEEEETTTTSTTHHHHHHHHH-H-TTCEEEEEESSHHHHHHHHHH----T-CSEEEETTTSCHHHHHHHHHTTCCE
T ss_pred CCCCCEEEEECCccHHHHHHHHHHH-H-CCCEEEEEeCCHHHHHHHHHc----C-CCEEEECCCHHHHHHHHHHhCCCCC
Confidence 478899999994 889999999888 2 578999999999999888764 3 111111111222221111 1469
Q ss_pred cEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 204 DCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 204 D~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|+||.++.. ..++.+.+.|++||+++..+
T Consensus 216 d~vi~~~g~--------~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 216 DVVYDSIGK--------DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp EEEEECSCT--------TTHHHHHHTEEEEEEEEECC
T ss_pred eEEEECCcH--------HHHHHHHHhhccCCEEEEEe
Confidence 999988753 34678889999999998765
No 351
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=97.54 E-value=0.0001 Score=69.23 Aligned_cols=98 Identities=13% Similarity=0.011 Sum_probs=69.9
Q ss_pred cCCCCeEEEecC-CCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcch-------------
Q 039591 128 VVQPKKVAFVGS-GPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDI------------- 193 (284)
Q Consensus 128 ~~~~~~VL~iGs-Gp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~------------- 193 (284)
.+++++||..|+ |++|+.++.+|+ ..|++|++++.+++..+.++++ | ....+.....|.
T Consensus 218 ~~~g~~VlV~GasG~iG~~a~qla~--~~Ga~vi~~~~~~~~~~~~~~l----G-a~~~i~~~~~~~~~~~~~~~~~~~~ 290 (447)
T 4a0s_A 218 MKQGDIVLIWGASGGLGSYAIQFVK--NGGGIPVAVVSSAQKEAAVRAL----G-CDLVINRAELGITDDIADDPRRVVE 290 (447)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHH--HTTCEEEEEESSHHHHHHHHHT----T-CCCEEEHHHHTCCTTGGGCHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHH--HcCCEEEEEeCCHHHHHHHHhc----C-CCEEEecccccccccccccccccch
Confidence 478899999997 999999999998 3678999999999999988764 3 112122111111
Q ss_pred -----hhhhcc--CCCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 194 -----LQVKEK--LGEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 194 -----~~~~~~--l~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.+...+ -..+|+||.+... ..++.+.+.|++||+++..+
T Consensus 291 ~~~~~~~~v~~~~g~g~Dvvid~~G~--------~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 291 TGRKLAKLVVEKAGREPDIVFEHTGR--------VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHHHSSCCSEEEECSCH--------HHHHHHHHHSCTTCEEEESC
T ss_pred hhhHHHHHHHHHhCCCceEEEECCCc--------hHHHHHHHHHhcCCEEEEEe
Confidence 111111 1479999987653 35778889999999999865
No 352
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=97.52 E-value=8.8e-05 Score=67.12 Aligned_cols=99 Identities=12% Similarity=0.070 Sum_probs=68.7
Q ss_pred cCCCCeEEEecC-CCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEE-cchhhhhccC--CCc
Q 039591 128 VVQPKKVAFVGS-GPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLT-GDILQVKEKL--GEY 203 (284)
Q Consensus 128 ~~~~~~VL~iGs-Gp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~-~D~~~~~~~l--~~f 203 (284)
.+++++||..|+ |++|..++.+++ ..|++|+++|.+++..+.+++. +| ....+.... .|+.+..... +.+
T Consensus 153 ~~~g~~vlI~Ga~g~iG~~~~~~a~--~~G~~V~~~~~~~~~~~~~~~~---~g-~~~~~d~~~~~~~~~~~~~~~~~~~ 226 (345)
T 2j3h_A 153 PKEGETVYVSAASGAVGQLVGQLAK--MMGCYVVGSAGSKEKVDLLKTK---FG-FDDAFNYKEESDLTAALKRCFPNGI 226 (345)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHH--HTTCEEEEEESSHHHHHHHHHT---SC-CSEEEETTSCSCSHHHHHHHCTTCE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHH---cC-CceEEecCCHHHHHHHHHHHhCCCC
Confidence 478899999996 889999999988 3578999999999998887632 23 111111111 1222211111 479
Q ss_pred cEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 204 DCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 204 D~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|+|+.+... ..++.+.+.|++||+++..+
T Consensus 227 d~vi~~~g~--------~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 227 DIYFENVGG--------KMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp EEEEESSCH--------HHHHHHHTTEEEEEEEEECC
T ss_pred cEEEECCCH--------HHHHHHHHHHhcCCEEEEEc
Confidence 999988652 36788899999999998865
No 353
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=97.51 E-value=6.8e-05 Score=69.32 Aligned_cols=103 Identities=17% Similarity=0.182 Sum_probs=67.6
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.++++|+.+|+|++|..+...++ ..|++|+++|.+++.++.+++.. + ..+.....+..+....+..+|+|+.
T Consensus 166 l~g~~V~ViG~G~iG~~~a~~a~--~~Ga~V~~~d~~~~~l~~~~~~~---g---~~~~~~~~~~~~l~~~l~~aDvVi~ 237 (377)
T 2vhw_A 166 VEPADVVVIGAGTAGYNAARIAN--GMGATVTVLDINIDKLRQLDAEF---C---GRIHTRYSSAYELEGAVKRADLVIG 237 (377)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHH--HTTCEEEEEESCHHHHHHHHHHT---T---TSSEEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHH--hCCCEEEEEeCCHHHHHHHHHhc---C---CeeEeccCCHHHHHHHHcCCCEEEE
Confidence 46789999999999999888887 25679999999999988877643 2 2222222122221112257999998
Q ss_pred cCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 209 AALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+...... +.+.-+.+...+.|||||+++..+
T Consensus 238 ~~~~p~~-~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 238 AVLVPGA-KAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp CCCCTTS-CCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred CCCcCCC-CCcceecHHHHhcCCCCcEEEEEe
Confidence 7654221 000112456678899999988765
No 354
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=97.50 E-value=6.9e-05 Score=68.62 Aligned_cols=92 Identities=16% Similarity=0.145 Sum_probs=67.0
Q ss_pred CCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCH---HHHHHHHHHHhhccCCCCCeEEEEcchhhhh--ccCCCccE
Q 039591 131 PKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDE---AANNVARRIVATDFEFEKRMKFLTGDILQVK--EKLGEYDC 205 (284)
Q Consensus 131 ~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~---~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~--~~l~~fD~ 205 (284)
+++||.+|+|++|..++.+++ . .|++|+++|.++ +..+.++++ | . +.+. .. |+.+.. .. +.+|+
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~-~-~Ga~Vi~~~~~~~~~~~~~~~~~~----g-a-~~v~-~~-~~~~~~~~~~-~~~d~ 249 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFR-T-YGLEVWMANRREPTEVEQTVIEET----K-T-NYYN-SS-NGYDKLKDSV-GKFDV 249 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHH-H-HTCEEEEEESSCCCHHHHHHHHHH----T-C-EEEE-CT-TCSHHHHHHH-CCEEE
T ss_pred CCEEEEECCCHHHHHHHHHHH-h-CCCEEEEEeCCccchHHHHHHHHh----C-C-ceec-hH-HHHHHHHHhC-CCCCE
Confidence 899999999999999999998 3 467999999998 888887764 3 1 1121 11 221111 11 57999
Q ss_pred EEEcCcCCCCHHHHHHHH-HHHHhccccCcEEEEEe
Q 039591 206 IFLAALVGMSKEEKMKII-RHIRKYMKDGGILLVRS 240 (284)
Q Consensus 206 V~~~~~~~~~~~~k~~~l-~~~~~~L~pGG~lv~~~ 240 (284)
||.+... ...+ +.+.+.|++||+++..+
T Consensus 250 vid~~g~-------~~~~~~~~~~~l~~~G~iv~~g 278 (366)
T 2cdc_A 250 IIDATGA-------DVNILGNVIPLLGRNGVLGLFG 278 (366)
T ss_dssp EEECCCC-------CTHHHHHHGGGEEEEEEEEECS
T ss_pred EEECCCC-------hHHHHHHHHHHHhcCCEEEEEe
Confidence 9988764 2356 88899999999998765
No 355
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=97.48 E-value=7.7e-05 Score=67.07 Aligned_cols=98 Identities=8% Similarity=0.048 Sum_probs=68.3
Q ss_pred cCCCCeEEEec-CCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhcc---CCCc
Q 039591 128 VVQPKKVAFVG-SGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEK---LGEY 203 (284)
Q Consensus 128 ~~~~~~VL~iG-sGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~---l~~f 203 (284)
.+++++||..| +|++|..++.+++. .|++|+++|.+++..+.++++ + ....+.....+..+...+ -..+
T Consensus 138 ~~~g~~vlV~Ga~ggiG~~~~~~a~~--~G~~V~~~~~~~~~~~~~~~~----g-~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (327)
T 1qor_A 138 IKPDEQFLFHAAAGGVGLIACQWAKA--LGAKLIGTVGTAQKAQSALKA----G-AWQVINYREEDLVERLKEITGGKKV 210 (327)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHH--HTCEEEEEESSHHHHHHHHHH----T-CSEEEETTTSCHHHHHHHHTTTCCE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHHc----C-CCEEEECCCccHHHHHHHHhCCCCc
Confidence 47889999999 68799999888872 578999999999999888764 3 111111111222221111 1469
Q ss_pred cEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 204 DCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 204 D~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|+|+.++.. ..++.+.+.|++||+++..+
T Consensus 211 D~vi~~~g~--------~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 211 RVVYDSVGR--------DTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp EEEEECSCG--------GGHHHHHHTEEEEEEEEECC
T ss_pred eEEEECCch--------HHHHHHHHHhcCCCEEEEEe
Confidence 999988752 35678889999999998765
No 356
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=97.48 E-value=6.9e-05 Score=68.11 Aligned_cols=97 Identities=10% Similarity=-0.017 Sum_probs=67.1
Q ss_pred CCC-CeEEEe-cCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC---CCc
Q 039591 129 VQP-KKVAFV-GSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL---GEY 203 (284)
Q Consensus 129 ~~~-~~VL~i-GsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l---~~f 203 (284)
.++ ++|+.. |+|++|+.++.+|+. .|++|+++|.+++..+.++++ | ...-+.....|..+...++ ..+
T Consensus 162 ~~g~~~vli~gg~g~vG~~a~qla~~--~Ga~Vi~~~~~~~~~~~~~~~----G-a~~~~~~~~~~~~~~v~~~~~~~g~ 234 (349)
T 3pi7_A 162 QEGEKAFVMTAGASQLCKLIIGLAKE--EGFRPIVTVRRDEQIALLKDI----G-AAHVLNEKAPDFEATLREVMKAEQP 234 (349)
T ss_dssp HHCCSEEEESSTTSHHHHHHHHHHHH--HTCEEEEEESCGGGHHHHHHH----T-CSEEEETTSTTHHHHHHHHHHHHCC
T ss_pred hCCCCEEEEeCCCcHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHc----C-CCEEEECCcHHHHHHHHHHhcCCCC
Confidence 444 566665 899999999999983 578999999999999998865 3 1111222223333222222 379
Q ss_pred cEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 204 DCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 204 D~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|+||.+... ..+..+.+.|++||+++..+
T Consensus 235 D~vid~~g~--------~~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 235 RIFLDAVTG--------PLASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp CEEEESSCH--------HHHHHHHHHSCTTCEEEECC
T ss_pred cEEEECCCC--------hhHHHHHhhhcCCCEEEEEe
Confidence 999988653 23477889999999999876
No 357
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=97.45 E-value=0.00015 Score=65.94 Aligned_cols=100 Identities=8% Similarity=0.048 Sum_probs=69.0
Q ss_pred ccCCC--CeEEEecC-CCChHHHHHHHhhcCCCc-EEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC--
Q 039591 127 GVVQP--KKVAFVGS-GPMPLTSIVMAKNHLKAT-HFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL-- 200 (284)
Q Consensus 127 ~~~~~--~~VL~iGs-Gp~G~~ai~la~~~~~~~-~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l-- 200 (284)
..+++ ++||..|+ |++|..++.+++ . .|+ +|+++|.+++..+.+++. +| ....+.....+..+...+.
T Consensus 155 ~~~~g~~~~vlI~GasggiG~~~~~~a~-~-~Ga~~Vi~~~~~~~~~~~~~~~---~g-~~~~~d~~~~~~~~~~~~~~~ 228 (357)
T 2zb4_A 155 HITAGSNKTMVVSGAAGACGSVAGQIGH-F-LGCSRVVGICGTHEKCILLTSE---LG-FDAAINYKKDNVAEQLRESCP 228 (357)
T ss_dssp CCCTTSCCEEEESSTTBHHHHHHHHHHH-H-TTCSEEEEEESCHHHHHHHHHT---SC-CSEEEETTTSCHHHHHHHHCT
T ss_pred CCCCCCccEEEEECCCcHHHHHHHHHHH-H-CCCCeEEEEeCCHHHHHHHHHH---cC-CceEEecCchHHHHHHHHhcC
Confidence 34778 99999997 889999999888 3 567 999999999988877652 23 1111111111222211111
Q ss_pred CCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 201 GEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 201 ~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+.+|+|+.++. ...++.+.+.|++||+++..+
T Consensus 229 ~~~d~vi~~~G--------~~~~~~~~~~l~~~G~iv~~G 260 (357)
T 2zb4_A 229 AGVDVYFDNVG--------GNISDTVISQMNENSHIILCG 260 (357)
T ss_dssp TCEEEEEESCC--------HHHHHHHHHTEEEEEEEEECC
T ss_pred CCCCEEEECCC--------HHHHHHHHHHhccCcEEEEEC
Confidence 36999998875 256788899999999998765
No 358
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=97.45 E-value=0.00018 Score=66.07 Aligned_cols=102 Identities=19% Similarity=0.304 Sum_probs=67.7
Q ss_pred CCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEEc
Q 039591 130 QPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFLA 209 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~~ 209 (284)
++++|+.+|+|+.|..++.+++ . .|++|+++|.+++.++.+++.... .+.....+..+....+..+|+|+.+
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~-~-~Ga~V~v~dr~~~r~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~DvVI~~ 237 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAV-G-LGAQVQIFDINVERLSYLETLFGS------RVELLYSNSAEIETAVAEADLLIGA 237 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHH-H-TTCEEEEEESCHHHHHHHHHHHGG------GSEEEECCHHHHHHHHHTCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHH-h-CCCEEEEEeCCHHHHHHHHHhhCc------eeEeeeCCHHHHHHHHcCCCEEEEC
Confidence 4589999999999999888887 2 466999999999999888776432 2222222222222223579999988
Q ss_pred CcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 210 ALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 210 ~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
...+..... .-+.+...+.|+|||+++...
T Consensus 238 ~~~~~~~~~-~li~~~~~~~~~~g~~ivdv~ 267 (361)
T 1pjc_A 238 VLVPGRRAP-ILVPASLVEQMRTGSVIVDVA 267 (361)
T ss_dssp CCCTTSSCC-CCBCHHHHTTSCTTCEEEETT
T ss_pred CCcCCCCCC-eecCHHHHhhCCCCCEEEEEe
Confidence 765321000 012345667899999888655
No 359
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=97.44 E-value=9.5e-05 Score=67.47 Aligned_cols=98 Identities=8% Similarity=-0.068 Sum_probs=63.2
Q ss_pred cCCC-CeEEEecC-CCChHHHHHHHhhcCCCcEEEEEeCCHHH----HHHHHHHHhhccCCCCCeEEEE---cchhhhhc
Q 039591 128 VVQP-KKVAFVGS-GPMPLTSIVMAKNHLKATHFDNFDIDEAA----NNVARRIVATDFEFEKRMKFLT---GDILQVKE 198 (284)
Q Consensus 128 ~~~~-~~VL~iGs-Gp~G~~ai~la~~~~~~~~V~~vDis~~~----~~~A~~~~~~~~~l~~~v~~~~---~D~~~~~~ 198 (284)
.+++ ++||..|+ |++|+.++.+|+ . .|++++++..+++. .+.+++ +| .+.-+.... .|+.+...
T Consensus 164 ~~~g~~~VlV~Ga~G~vG~~aiqlak-~-~Ga~vi~~~~~~~~~~~~~~~~~~----lG-a~~vi~~~~~~~~~~~~~i~ 236 (364)
T 1gu7_A 164 LTPGKDWFIQNGGTSAVGKYASQIGK-L-LNFNSISVIRDRPNLDEVVASLKE----LG-ATQVITEDQNNSREFGPTIK 236 (364)
T ss_dssp CCTTTCEEEESCTTSHHHHHHHHHHH-H-HTCEEEEEECCCTTHHHHHHHHHH----HT-CSEEEEHHHHHCGGGHHHHH
T ss_pred cCCCCcEEEECCCCcHHHHHHHHHHH-H-CCCEEEEEecCccccHHHHHHHHh----cC-CeEEEecCccchHHHHHHHH
Confidence 4678 99999997 999999999998 3 57888888765543 344433 34 111122111 23222211
Q ss_pred -----cCCCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 199 -----KLGEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 199 -----~l~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.-+.+|+||.+... .... .+.+.|++||+++..+
T Consensus 237 ~~t~~~~~g~Dvvid~~G~-------~~~~-~~~~~l~~~G~~v~~g 275 (364)
T 1gu7_A 237 EWIKQSGGEAKLALNCVGG-------KSST-GIARKLNNNGLMLTYG 275 (364)
T ss_dssp HHHHHHTCCEEEEEESSCH-------HHHH-HHHHTSCTTCEEEECC
T ss_pred HHhhccCCCceEEEECCCc-------hhHH-HHHHHhccCCEEEEec
Confidence 12479999988653 2333 6678999999998765
No 360
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.41 E-value=0.00051 Score=61.15 Aligned_cols=47 Identities=15% Similarity=0.008 Sum_probs=42.5
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhc
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATD 179 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~ 179 (284)
.+++.|||++|| +|.+++.+++ .|.+++++|+++.+++.|+++++..
T Consensus 234 ~~~~~vlD~f~G-sGt~~~~a~~---~g~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 234 FVGDVVLDPFAG-TGTTLIAAAR---WGRRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp CTTCEEEETTCT-TTHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCC-CCHHHHHHHH---cCCeEEEEeCCHHHHHHHHHHHHHh
Confidence 678999999999 9999998887 5789999999999999999998763
No 361
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.41 E-value=0.00084 Score=52.71 Aligned_cols=95 Identities=9% Similarity=-0.019 Sum_probs=66.7
Q ss_pred CCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhh--hc--cCCCccEE
Q 039591 131 PKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQV--KE--KLGEYDCI 206 (284)
Q Consensus 131 ~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~--~~--~l~~fD~V 206 (284)
.++|+.+|+|..|.......+ ..|..|+++|.+++.++.+++. + +.++.+|..+. .. ....+|+|
T Consensus 7 ~~~viIiG~G~~G~~la~~L~--~~g~~v~vid~~~~~~~~~~~~----g-----~~~i~gd~~~~~~l~~a~i~~ad~v 75 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLL--ASDIPLVVIETSRTRVDELRER----G-----VRAVLGNAANEEIMQLAHLECAKWL 75 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHH--HTTCCEEEEESCHHHHHHHHHT----T-----CEEEESCTTSHHHHHHTTGGGCSEE
T ss_pred CCCEEEECcCHHHHHHHHHHH--HCCCCEEEEECCHHHHHHHHHc----C-----CCEEECCCCCHHHHHhcCcccCCEE
Confidence 468999999988877655443 2578999999999998876642 2 56788887653 11 23679999
Q ss_pred EEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 207 FLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 207 ~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+++... ......+-...+.+.|+..++.+.
T Consensus 76 i~~~~~----~~~n~~~~~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 76 ILTIPN----GYEAGEIVASARAKNPDIEIIARA 105 (140)
T ss_dssp EECCSC----HHHHHHHHHHHHHHCSSSEEEEEE
T ss_pred EEECCC----hHHHHHHHHHHHHHCCCCeEEEEE
Confidence 988654 222333344567788899888876
No 362
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=97.38 E-value=0.00037 Score=64.04 Aligned_cols=103 Identities=18% Similarity=0.245 Sum_probs=66.7
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
-.+++|+.+|+|++|..+...++ ..|++|+++|.+++..+.+++.. + ..+.....+..+....+..+|+|+.
T Consensus 164 l~~~~V~ViGaG~iG~~~a~~l~--~~Ga~V~~~d~~~~~~~~~~~~~---g---~~~~~~~~~~~~l~~~~~~~DvVi~ 235 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNAAKIAL--GMGAQVTILDVNHKRLQYLDDVF---G---GRVITLTATEANIKKSVQHADLLIG 235 (369)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHH--HTTCEEEEEESCHHHHHHHHHHT---T---TSEEEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHH--hCCCEEEEEECCHHHHHHHHHhc---C---ceEEEecCCHHHHHHHHhCCCEEEE
Confidence 35689999999999998888776 35779999999999887766532 2 2232222222222122257999998
Q ss_pred cCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 209 AALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+...... ....-+.+...+.|++||+++..+
T Consensus 236 ~~g~~~~-~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 236 AVLVPGA-KAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp CCC--------CCSCHHHHTTSCTTCEEEECC
T ss_pred CCCCCcc-ccchhHHHHHHHhhcCCCEEEEEe
Confidence 8765210 011113467778999999988765
No 363
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=97.36 E-value=0.00014 Score=66.10 Aligned_cols=96 Identities=8% Similarity=0.036 Sum_probs=61.9
Q ss_pred cCCCCeEEEecC-CCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC--CCcc
Q 039591 128 VVQPKKVAFVGS-GPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL--GEYD 204 (284)
Q Consensus 128 ~~~~~~VL~iGs-Gp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l--~~fD 204 (284)
.+++++||..|+ |++|..++.+|+ ...+.+|++++ +++..+.++ +| ...-+. ...|..+...++ +.+|
T Consensus 140 ~~~g~~VlV~Ga~G~vG~~a~qla~-~~g~~~V~~~~-~~~~~~~~~-----~g-a~~~~~-~~~~~~~~~~~~~~~g~D 210 (349)
T 4a27_A 140 LREGMSVLVHSAGGGVGQAVAQLCS-TVPNVTVFGTA-STFKHEAIK-----DS-VTHLFD-RNADYVQEVKRISAEGVD 210 (349)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHT-TSTTCEEEEEE-CGGGHHHHG-----GG-SSEEEE-TTSCHHHHHHHHCTTCEE
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHH-HcCCcEEEEeC-CHHHHHHHH-----cC-CcEEEc-CCccHHHHHHHhcCCCce
Confidence 478899999998 889999999998 45567999998 565555554 23 112122 222333222221 5799
Q ss_pred EEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 205 CIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 205 ~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+||.+... ..+..+.+.|++||+++..+
T Consensus 211 vv~d~~g~--------~~~~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 211 IVLDCLCG--------DNTGKGLSLLKPLGTYILYG 238 (349)
T ss_dssp EEEEECC---------------CTTEEEEEEEEEEC
T ss_pred EEEECCCc--------hhHHHHHHHhhcCCEEEEEC
Confidence 99987653 12367889999999999866
No 364
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.35 E-value=0.002 Score=55.52 Aligned_cols=109 Identities=13% Similarity=0.202 Sum_probs=69.5
Q ss_pred HhhccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEc-chhhhhccCCC
Q 039591 124 KENGVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTG-DILQVKEKLGE 202 (284)
Q Consensus 124 ~~~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~-D~~~~~~~l~~ 202 (284)
.+....++.+|+|+||+|.|.+-.+..+ ....+|.++|+-+.-.+.= .+++.+| -..++|..+ |+..... ..
T Consensus 72 ek~~l~~g~~VvDLGaapGGWSq~~a~~--~g~~~V~avdvG~~ghe~P-~~~~s~g--wn~v~fk~gvDv~~~~~--~~ 144 (267)
T 3p8z_A 72 ERNMVIPEGRVIDLGCGRGGWSYYCAGL--KKVTEVRGYTKGGPGHEEP-VPMSTYG--WNIVKLMSGKDVFYLPP--EK 144 (267)
T ss_dssp HTTSSCCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCC-CCCCCTT--TTSEEEECSCCGGGCCC--CC
T ss_pred HhcCCCCCCEEEEcCCCCCcHHHHHHHh--cCCCEEEEEecCCCCccCc-chhhhcC--cCceEEEeccceeecCC--cc
Confidence 3344578889999999988876544443 3445799999965433110 1123333 256999999 9865433 67
Q ss_pred ccEEEEcCcC--CCCHHHH---HHHHHHHHhccccCcEEEEEe
Q 039591 203 YDCIFLAALV--GMSKEEK---MKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 203 fD~V~~~~~~--~~~~~~k---~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+|.|++|-.- +...-+. .++++-+.++|++ |-+++.-
T Consensus 145 ~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KV 186 (267)
T 3p8z_A 145 CDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKV 186 (267)
T ss_dssp CSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEE
T ss_pred ccEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEE
Confidence 9999998543 2111233 3467777899999 5666544
No 365
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.30 E-value=0.0012 Score=53.96 Aligned_cols=96 Identities=14% Similarity=0.093 Sum_probs=63.4
Q ss_pred CCCeEEEecCCCChHHHHHHHhhcCC-CcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhh--h-c--cCCCc
Q 039591 130 QPKKVAFVGSGPMPLTSIVMAKNHLK-ATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQV--K-E--KLGEY 203 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~ai~la~~~~~-~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~--~-~--~l~~f 203 (284)
.+++|+.+|+|++|.......+ .. |.+|+++|.+++.++.+++. | +.++.+|..+. . . ....+
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~--~~~g~~V~vid~~~~~~~~~~~~----g-----~~~~~gd~~~~~~l~~~~~~~~a 106 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELR--ARYGKISLGIEIREEAAQQHRSE----G-----RNVISGDATDPDFWERILDTGHV 106 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHH--HHHCSCEEEEESCHHHHHHHHHT----T-----CCEEECCTTCHHHHHTBCSCCCC
T ss_pred CCCcEEEECCCHHHHHHHHHHH--hccCCeEEEEECCHHHHHHHHHC----C-----CCEEEcCCCCHHHHHhccCCCCC
Confidence 3568999999988877655443 24 78999999999988765532 2 34566776432 1 1 24679
Q ss_pred cEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 204 DCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 204 D~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|+|+.+... ...-..+ -...+.+.|++.++.+.
T Consensus 107 d~vi~~~~~---~~~~~~~-~~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 107 KLVLLAMPH---HQGNQTA-LEQLQRRNYKGQIAAIA 139 (183)
T ss_dssp CEEEECCSS---HHHHHHH-HHHHHHTTCCSEEEEEE
T ss_pred CEEEEeCCC---hHHHHHH-HHHHHHHCCCCEEEEEE
Confidence 999987653 1222233 34556778888888765
No 366
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.25 E-value=0.00033 Score=62.06 Aligned_cols=99 Identities=15% Similarity=0.107 Sum_probs=71.5
Q ss_pred CCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC----CCccEE
Q 039591 131 PKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL----GEYDCI 206 (284)
Q Consensus 131 ~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l----~~fD~V 206 (284)
+..+||+=+| +|..++.+.+ ++.+++.+|.+++..+.-+++++. ..+++++++|+......+ .+||+|
T Consensus 92 ~~~~LDlfaG-SGaLgiEaLS---~~d~~vfvE~~~~a~~~L~~Nl~~----~~~~~V~~~D~~~~L~~l~~~~~~fdLV 163 (283)
T 2oo3_A 92 LNSTLSYYPG-SPYFAINQLR---SQDRLYLCELHPTEYNFLLKLPHF----NKKVYVNHTDGVSKLNALLPPPEKRGLI 163 (283)
T ss_dssp SSSSCCEEEC-HHHHHHHHSC---TTSEEEEECCSHHHHHHHTTSCCT----TSCEEEECSCHHHHHHHHCSCTTSCEEE
T ss_pred CCCceeEeCC-cHHHHHHHcC---CCCeEEEEeCCHHHHHHHHHHhCc----CCcEEEEeCcHHHHHHHhcCCCCCccEE
Confidence 4567777666 6666666655 568999999999999999999865 368999999987654322 469999
Q ss_pred EEcCcCCCCHHHHHHHHHHHHh--ccccCcEEEE
Q 039591 207 FLAALVGMSKEEKMKIIRHIRK--YMKDGGILLV 238 (284)
Q Consensus 207 ~~~~~~~~~~~~k~~~l~~~~~--~L~pGG~lv~ 238 (284)
|+|.+.... .+-.++++.+.+ .+.|+|++++
T Consensus 164 fiDPPYe~k-~~~~~vl~~L~~~~~r~~~Gi~v~ 196 (283)
T 2oo3_A 164 FIDPSYERK-EEYKEIPYAIKNAYSKFSTGLYCV 196 (283)
T ss_dssp EECCCCCST-THHHHHHHHHHHHHHHCTTSEEEE
T ss_pred EECCCCCCC-cHHHHHHHHHHHhCccCCCeEEEE
Confidence 999987532 233444444443 5678888876
No 367
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.22 E-value=0.0013 Score=63.40 Aligned_cols=113 Identities=12% Similarity=0.042 Sum_probs=75.1
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhc---C---------CCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhh
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNH---L---------KATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQ 195 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~---~---------~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~ 195 (284)
+.++.+|+|-.|| +|-..+...++. . ....++|+|+++.+..+|+-+.--.| . ..-.+..+|...
T Consensus 215 p~~~~~I~DPacG-sGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg-~-~~~~I~~~dtL~ 291 (530)
T 3ufb_A 215 PQLGESVLDPACG-TGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHG-L-EYPRIDPENSLR 291 (530)
T ss_dssp CCTTCCEEETTCT-TTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHT-C-SCCEEECSCTTC
T ss_pred cCCCCEEEeCCCC-cchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcC-C-cccccccccccc
Confidence 3667899999999 565544433311 1 12469999999999999998765444 2 334677888764
Q ss_pred hhc----cCCCccEEEEcCcCCCC--HH-------------HHHHHHHHHHhccc-------cCcEEEEEeccc
Q 039591 196 VKE----KLGEYDCIFLAALVGMS--KE-------------EKMKIIRHIRKYMK-------DGGILLVRSAKG 243 (284)
Q Consensus 196 ~~~----~l~~fD~V~~~~~~~~~--~~-------------~k~~~l~~~~~~L~-------pGG~lv~~~~~g 243 (284)
... +..+||+|+.+.+.+.. .. .-..++.++.+.|+ |||++.+...+|
T Consensus 292 ~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~g 365 (530)
T 3ufb_A 292 FPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNG 365 (530)
T ss_dssp SCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEHH
T ss_pred CchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEecch
Confidence 321 12579999999887521 10 11356778887876 799988766444
No 368
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=97.21 E-value=0.0033 Score=56.68 Aligned_cols=102 Identities=16% Similarity=0.148 Sum_probs=72.2
Q ss_pred CCCeEEEecCCCChHH-HHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhc-------cCCC---------CCeEEEEcc
Q 039591 130 QPKKVAFVGSGPMPLT-SIVMAKNHLKATHFDNFDIDEAANNVARRIVATD-------FEFE---------KRMKFLTGD 192 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~-ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~-------~~l~---------~~v~~~~~D 192 (284)
...+|..||+|.+|.. +..+|. .|..|+.+|+++++++.+.+.+++. +.+. .++++ +.|
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~---~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~-~~~ 80 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFAS---GGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTN 80 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHH---TTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECC
T ss_pred CCCeEEEECCcHHHHHHHHHHHh---CCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhccc-ccc
Confidence 3568999999988865 334444 6899999999999998887665421 1111 12333 234
Q ss_pred hhhhhccCCCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 193 ILQVKEKLGEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 193 ~~~~~~~l~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
..+ .+...|+|+.+..- ..+-|.++|+++-++++|+.+|.-.+
T Consensus 81 l~~---a~~~ad~ViEav~E--~l~iK~~lf~~l~~~~~~~aIlaSNT 123 (319)
T 3ado_A 81 LAE---AVEGVVHIQECVPE--NLDLKRKIFAQLDSIVDDRVVLSSSS 123 (319)
T ss_dssp HHH---HTTTEEEEEECCCS--CHHHHHHHHHHHHTTCCSSSEEEECC
T ss_pred hHh---HhccCcEEeecccc--HHHHHHHHHHHHHHHhhhcceeehhh
Confidence 332 24679999988653 45789999999999999999888765
No 369
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=97.18 E-value=0.00022 Score=65.95 Aligned_cols=109 Identities=15% Similarity=0.229 Sum_probs=66.5
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCC---CCe-EEEE--------cchhhh
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFE---KRM-KFLT--------GDILQV 196 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~---~~v-~~~~--------~D~~~~ 196 (284)
.++.+|+.+|+|+.|..+..+++ ..|++|+++|.+++.++.+++.-...-.+. ... .+.. .+...+
T Consensus 182 v~~~kV~ViG~G~iG~~aa~~a~--~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l 259 (381)
T 3p2y_A 182 VKPASALVLGVGVAGLQALATAK--RLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQAL 259 (381)
T ss_dssp ECCCEEEEESCSHHHHHHHHHHH--HHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHH
T ss_pred cCCCEEEEECchHHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHH
Confidence 36889999999999999998887 247899999999999888876411100000 000 0000 001111
Q ss_pred hccCCCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 197 KEKLGEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 197 ~~~l~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
...+..+|+|+.......... +.-+-++..+.||||++++-.+
T Consensus 260 ~e~l~~aDIVI~tv~iPg~~a-p~Lvt~emv~~MkpGsVIVDvA 302 (381)
T 3p2y_A 260 EDAITKFDIVITTALVPGRPA-PRLVTAAAATGMQPGSVVVDLA 302 (381)
T ss_dssp HHHHTTCSEEEECCCCTTSCC-CCCBCHHHHHTSCTTCEEEETT
T ss_pred HHHHhcCCEEEECCCCCCccc-ceeecHHHHhcCCCCcEEEEEe
Confidence 122378999998754311000 0113367888999999888655
No 370
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=97.16 E-value=0.00021 Score=66.52 Aligned_cols=110 Identities=20% Similarity=0.266 Sum_probs=67.3
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCC-------CCeE-EEE---cc-----
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFE-------KRMK-FLT---GD----- 192 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~-------~~v~-~~~---~D----- 192 (284)
.++.+|+.+|+|+.|..+..+++ .-|++|+++|+++..++.+++.-...-.+. .... +.. .+
T Consensus 188 v~~~kV~ViG~G~iG~~aa~~a~--~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~ 265 (405)
T 4dio_A 188 VPAAKIFVMGAGVAGLQAIATAR--RLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQ 265 (405)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHH--HTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHH
T ss_pred cCCCEEEEECCcHHHHHHHHHHH--HCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhh
Confidence 36789999999999999999888 357899999999999888876421100000 0000 110 00
Q ss_pred hhhhhccCCCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEec
Q 039591 193 ILQVKEKLGEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 193 ~~~~~~~l~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
...+...+...|+|+...+..-... +.-+-++..+.||||++++-.+.
T Consensus 266 ~~~l~e~l~~aDVVI~tvlipg~~a-p~Lvt~emv~~Mk~GsVIVDvA~ 313 (405)
T 4dio_A 266 AALVAEHIAKQDIVITTALIPGRPA-PRLVTREMLDSMKPGSVVVDLAV 313 (405)
T ss_dssp HHHHHHHHHTCSEEEECCCCSSSCC-CCCBCHHHHTTSCTTCEEEETTG
T ss_pred HhHHHHHhcCCCEEEECCcCCCCCC-CEEecHHHHhcCCCCCEEEEEeC
Confidence 0011112268999998754321000 01133678889999999886653
No 371
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=97.14 E-value=0.0047 Score=55.62 Aligned_cols=99 Identities=15% Similarity=0.138 Sum_probs=69.4
Q ss_pred CeEEEecCCCChHH-HHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhh-------ccCCC---------CCeEEEEcchh
Q 039591 132 KKVAFVGSGPMPLT-SIVMAKNHLKATHFDNFDIDEAANNVARRIVAT-------DFEFE---------KRMKFLTGDIL 194 (284)
Q Consensus 132 ~~VL~iGsGp~G~~-ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~-------~~~l~---------~~v~~~~~D~~ 194 (284)
++|.+||+|.+|.. +..+++ .|.+|+.+|++++.++.+++.+.. .|.+. .++++ +.|..
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~---~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~-~~~~~ 82 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFAS---GGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTNLA 82 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---TTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECCHH
T ss_pred ceEEEEeeCHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEE-eCCHH
Confidence 68999999988865 344555 678999999999999988764321 12111 13454 34443
Q ss_pred hhhccCCCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEE
Q 039591 195 QVKEKLGEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVR 239 (284)
Q Consensus 195 ~~~~~l~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~ 239 (284)
+ .....|+|+.+.+. ...-|..+++++.+.++||.+|+..
T Consensus 83 e---av~~aDlVieavpe--~~~~k~~v~~~l~~~~~~~~Ii~s~ 122 (319)
T 2dpo_A 83 E---AVEGVVHIQECVPE--NLDLKRKIFAQLDSIVDDRVVLSSS 122 (319)
T ss_dssp H---HTTTEEEEEECCCS--CHHHHHHHHHHHHTTCCSSSEEEEC
T ss_pred H---HHhcCCEEEEeccC--CHHHHHHHHHHHHhhCCCCeEEEEe
Confidence 3 23679999999754 2356789999999999999977643
No 372
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=97.14 E-value=0.0018 Score=58.80 Aligned_cols=96 Identities=6% Similarity=-0.031 Sum_probs=59.4
Q ss_pred cCCCCeEEEecC-CCChHHHHHHHhhcCCCcEEE-EEeCCHH---HHHHHHHHHhhccCCCCCeEEEEc-----chhhhh
Q 039591 128 VVQPKKVAFVGS-GPMPLTSIVMAKNHLKATHFD-NFDIDEA---ANNVARRIVATDFEFEKRMKFLTG-----DILQVK 197 (284)
Q Consensus 128 ~~~~~~VL~iGs-Gp~G~~ai~la~~~~~~~~V~-~vDis~~---~~~~A~~~~~~~~~l~~~v~~~~~-----D~~~~~ 197 (284)
.+++++||.+|+ |++|..++.+|+ . .|++++ .++.++. ..+.++++ | . +. .+-.. ++.+..
T Consensus 165 ~~~g~~VlV~Ga~G~vG~~aiqlak-~-~Ga~vi~~~~~~~~~~~~~~~~~~l----G-a-~~-vi~~~~~~~~~~~~~~ 235 (357)
T 1zsy_A 165 LQPGDSVIQNASNSGVGQAVIQIAA-A-LGLRTINVVRDRPDIQKLSDRLKSL----G-A-EH-VITEEELRRPEMKNFF 235 (357)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHH-H-HTCEEEEEECCCSCHHHHHHHHHHT----T-C-SE-EEEHHHHHSGGGGGTT
T ss_pred cCCCCEEEEeCCcCHHHHHHHHHHH-H-cCCEEEEEecCccchHHHHHHHHhc----C-C-cE-EEecCcchHHHHHHHH
Confidence 478899999997 999999999998 3 466654 4455442 44555443 4 1 21 11111 111111
Q ss_pred ccCCCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 198 EKLGEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 198 ~~l~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
...+.+|+||.+... ... ....+.|++||+++..+
T Consensus 236 ~~~~~~Dvvid~~g~-------~~~-~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 236 KDMPQPRLALNCVGG-------KSS-TELLRQLARGGTMVTYG 270 (357)
T ss_dssp SSSCCCSEEEESSCH-------HHH-HHHHTTSCTTCEEEECC
T ss_pred hCCCCceEEEECCCc-------HHH-HHHHHhhCCCCEEEEEe
Confidence 111259999987653 222 45788999999998864
No 373
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.12 E-value=0.00036 Score=69.25 Aligned_cols=111 Identities=17% Similarity=0.225 Sum_probs=73.8
Q ss_pred CCCeEEEecCCCChHHHHHHHhhc---------CC--CcEEEEEeCCH---HHHHHH-----------HHHHhhccC---
Q 039591 130 QPKKVAFVGSGPMPLTSIVMAKNH---------LK--ATHFDNFDIDE---AANNVA-----------RRIVATDFE--- 181 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~ai~la~~~---------~~--~~~V~~vDis~---~~~~~A-----------~~~~~~~~~--- 181 (284)
++-+|+|+|-| +|++.+.+.+.. .+ ..+++.+|..| +-+..| +++.+.+..
T Consensus 58 ~~~~i~e~gfG-~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~ 136 (689)
T 3pvc_A 58 QSCIFAETGFG-TGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLA 136 (689)
T ss_dssp SEEEEEEECCT-TSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCS
T ss_pred CceEEEEecCc-hHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCC
Confidence 45689999999 999998765521 01 15799999944 444332 223332210
Q ss_pred ------CC---CCeEEEEcchhhhhccC-----CCccEEEEcCcCCCCHHH--HHHHHHHHHhccccCcEEEEEec
Q 039591 182 ------FE---KRMKFLTGDILQVKEKL-----GEYDCIFLAALVGMSKEE--KMKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 182 ------l~---~~v~~~~~D~~~~~~~l-----~~fD~V~~~~~~~~~~~~--k~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
+. -.++++.||+.+....+ ..+|.+|+|+......++ ..+++..+.++++|||.+...+.
T Consensus 137 ~~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~~ 212 (689)
T 3pvc_A 137 GCHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTFTA 212 (689)
T ss_dssp EEEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEESCC
T ss_pred CceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEeccC
Confidence 11 25788899999876654 579999999865210000 17899999999999999887653
No 374
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.11 E-value=0.0015 Score=58.01 Aligned_cols=109 Identities=10% Similarity=0.145 Sum_probs=68.2
Q ss_pred hhccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEc-chhhhhccCCCc
Q 039591 125 ENGVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTG-DILQVKEKLGEY 203 (284)
Q Consensus 125 ~~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~-D~~~~~~~l~~f 203 (284)
+....++.+|+|+||+|.|.+-.+..+ .....|.|+|+-..-.+.= .+++.++ ..-|.|..+ |+..... ..+
T Consensus 89 ~~~l~~~~~VlDLGaapGGwsq~~~~~--~gv~~V~avdvG~~~he~P-~~~~ql~--w~lV~~~~~~Dv~~l~~--~~~ 161 (321)
T 3lkz_A 89 RRFLEPVGKVIDLGCGRGGWCYYMATQ--KRVQEVRGYTKGGPGHEEP-QLVQSYG--WNIVTMKSGVDVFYRPS--ECC 161 (321)
T ss_dssp TTSCCCCEEEEEETCTTCHHHHHHTTC--TTEEEEEEECCCSTTSCCC-CCCCBTT--GGGEEEECSCCTTSSCC--CCC
T ss_pred hcCCCCCCEEEEeCCCCCcHHHHHHhh--cCCCEEEEEEcCCCCccCc-chhhhcC--CcceEEEeccCHhhCCC--CCC
Confidence 344578889999999988876544443 3334699999965421100 0112222 134888888 8865433 679
Q ss_pred cEEEEcCcCC--CCHHHH---HHHHHHHHhccccC-cEEEEEe
Q 039591 204 DCIFLAALVG--MSKEEK---MKIIRHIRKYMKDG-GILLVRS 240 (284)
Q Consensus 204 D~V~~~~~~~--~~~~~k---~~~l~~~~~~L~pG-G~lv~~~ 240 (284)
|+|++|..-. ...-+. .++++-+.++|++| |-+++.-
T Consensus 162 D~ivcDigeSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KV 204 (321)
T 3lkz_A 162 DTLLCDIGESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKV 204 (321)
T ss_dssp SEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred CEEEEECccCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEE
Confidence 9999986532 111233 34677778999998 8887755
No 375
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=97.09 E-value=0.00054 Score=65.45 Aligned_cols=90 Identities=22% Similarity=0.145 Sum_probs=65.7
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEE
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIF 207 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~ 207 (284)
...+++|+.+|+|++|......++ . .|.+|+++|.++...+.|++. | +++ .+..+. +..+|+|+
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lk-a-~Ga~Viv~d~~~~~~~~A~~~----G-----a~~--~~l~e~---l~~aDvVi 334 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMK-G-QGARVSVTEIDPINALQAMME----G-----FDV--VTVEEA---IGDADIVV 334 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHH-H-TTCEEEEECSCHHHHHHHHHT----T-----CEE--CCHHHH---GGGCSEEE
T ss_pred CCCcCEEEEEccCHHHHHHHHHHH-H-CCCEEEEEeCCHHHHHHHHHc----C-----CEE--ecHHHH---HhCCCEEE
Confidence 468899999999999999888887 2 568999999999988777643 3 122 233332 35799999
Q ss_pred EcCcCCCCHHHHHHHHH-HHHhccccCcEEEEEe
Q 039591 208 LAALVGMSKEEKMKIIR-HIRKYMKDGGILLVRS 240 (284)
Q Consensus 208 ~~~~~~~~~~~k~~~l~-~~~~~L~pGG~lv~~~ 240 (284)
.+.... .++. ...+.||+||+++..+
T Consensus 335 ~atgt~-------~~i~~~~l~~mk~ggilvnvG 361 (494)
T 3ce6_A 335 TATGNK-------DIIMLEHIKAMKDHAILGNIG 361 (494)
T ss_dssp ECSSSS-------CSBCHHHHHHSCTTCEEEECS
T ss_pred ECCCCH-------HHHHHHHHHhcCCCcEEEEeC
Confidence 986542 1222 5667899999998765
No 376
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.09 E-value=0.00051 Score=61.04 Aligned_cols=109 Identities=11% Similarity=0.092 Sum_probs=62.7
Q ss_pred ccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEc-chhhhhccCCCccE
Q 039591 127 GVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTG-DILQVKEKLGEYDC 205 (284)
Q Consensus 127 ~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~-D~~~~~~~l~~fD~ 205 (284)
...++.+|||+||+|.|.+- .+++ ..+...|+++|+........+. ....+ .+.+.+..+ |+..+ .-+.+|+
T Consensus 78 l~~~g~~vlDLGaaPGgWsq-va~~-~~gv~sV~Gvdlg~~~~~~P~~-~~~~~--~~iv~~~~~~di~~l--~~~~~Dl 150 (300)
T 3eld_A 78 YLRITGRVLDLGCGRGGWSY-YAAA-QKEVMSVKGYTLGIEGHEKPIH-MQTLG--WNIVKFKDKSNVFTM--PTEPSDT 150 (300)
T ss_dssp SCCCCEEEEEETCTTCHHHH-HHHT-STTEEEEEEECCCCTTSCCCCC-CCBTT--GGGEEEECSCCTTTS--CCCCCSE
T ss_pred CCCCCCEEEEcCCCCCHHHH-HHHH-hcCCceeeeEEecccccccccc-ccccC--CceEEeecCceeeec--CCCCcCE
Confidence 34788999999999877655 4444 2344579999996532110000 00101 012333322 33321 1268999
Q ss_pred EEEcCcC--CCCHHHH---HHHHHHHHhccccC-cEEEEEecc
Q 039591 206 IFLAALV--GMSKEEK---MKIIRHIRKYMKDG-GILLVRSAK 242 (284)
Q Consensus 206 V~~~~~~--~~~~~~k---~~~l~~~~~~L~pG-G~lv~~~~~ 242 (284)
|+++... |...-|. ..+++-+.++|+|| |.+++.-..
T Consensus 151 VlsD~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 151 LLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp EEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred EeecCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 9998543 3222222 35577778999999 999987644
No 377
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.07 E-value=0.0032 Score=54.88 Aligned_cols=108 Identities=11% Similarity=0.080 Sum_probs=60.9
Q ss_pred hccCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCC---eEEEEc-chhhhhccCC
Q 039591 126 NGVVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKR---MKFLTG-DILQVKEKLG 201 (284)
Q Consensus 126 ~~~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~---v~~~~~-D~~~~~~~l~ 201 (284)
...+++.+|+|+||+|.|.+ ...++ ...-..|.+.++...- . .......... ++|..+ |+.+.. -.
T Consensus 69 ~likpg~~VVDLGaAPGGWS-QvAa~-~~~vg~V~G~vig~D~-~-----~~P~~~~~~Gv~~i~~~~G~Df~~~~--~~ 138 (269)
T 2px2_A 69 RFVQPIGKVVDLGCGRGGWS-YYAAT-MKNVQEVRGYTKGGPG-H-----EEPMLMQSYGWNIVTMKSGVDVFYKP--SE 138 (269)
T ss_dssp TSCCCCEEEEEETCTTSHHH-HHHTT-STTEEEEEEECCCSTT-S-----CCCCCCCSTTGGGEEEECSCCGGGSC--CC
T ss_pred CCCCCCCEEEEcCCCCCHHH-HHHhh-hcCCCCceeEEEcccc-c-----cCCCcccCCCceEEEeeccCCccCCC--CC
Confidence 34588999999999997754 45554 2111233444332220 0 0000000123 355557 998632 25
Q ss_pred CccEEEEcCcC--CCCHHHHH---HHHHHHHhccccCc-EEEEEeccc
Q 039591 202 EYDCIFLAALV--GMSKEEKM---KIIRHIRKYMKDGG-ILLVRSAKG 243 (284)
Q Consensus 202 ~fD~V~~~~~~--~~~~~~k~---~~l~~~~~~L~pGG-~lv~~~~~g 243 (284)
++|+|++|... +...-|.. .+++-+.++|+||| -+++.-..|
T Consensus 139 ~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFqg 186 (269)
T 2px2_A 139 ISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILCP 186 (269)
T ss_dssp CCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCT
T ss_pred CCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECCC
Confidence 79999998532 33333333 35667779999999 888766433
No 378
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=97.05 E-value=0.0076 Score=46.25 Aligned_cols=95 Identities=16% Similarity=0.078 Sum_probs=59.7
Q ss_pred CCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhh--h--ccCCCccEE
Q 039591 131 PKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQV--K--EKLGEYDCI 206 (284)
Q Consensus 131 ~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~--~--~~l~~fD~V 206 (284)
+.+|+.+|+|.+|........ ..|.+|+.+|.+++.++..++. ..+.++.+|..+. . ..+..+|+|
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~--~~g~~v~~~d~~~~~~~~~~~~--------~~~~~~~~d~~~~~~l~~~~~~~~d~v 73 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLS--EKGHDIVLIDIDKDICKKASAE--------IDALVINGDCTKIKTLEDAGIEDADMY 73 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHH--HTTCEEEEEESCHHHHHHHHHH--------CSSEEEESCTTSHHHHHHTTTTTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHH--hCCCeEEEEECCHHHHHHHHHh--------cCcEEEEcCCCCHHHHHHcCcccCCEE
Confidence 468999999988876544332 1578999999999877654432 1245666775432 1 124679999
Q ss_pred EEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 207 FLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 207 ~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+.+... ......+..+.+.++++. ++.+.
T Consensus 74 i~~~~~----~~~~~~~~~~~~~~~~~~-ii~~~ 102 (140)
T 1lss_A 74 IAVTGK----EEVNLMSSLLAKSYGINK-TIARI 102 (140)
T ss_dssp EECCSC----HHHHHHHHHHHHHTTCCC-EEEEC
T ss_pred EEeeCC----chHHHHHHHHHHHcCCCE-EEEEe
Confidence 998654 222344555666788864 44433
No 379
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=97.03 E-value=0.00014 Score=66.95 Aligned_cols=77 Identities=5% Similarity=-0.091 Sum_probs=55.2
Q ss_pred CCCCeEEEe--cCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC---CCc
Q 039591 129 VQPKKVAFV--GSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL---GEY 203 (284)
Q Consensus 129 ~~~~~VL~i--GsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l---~~f 203 (284)
.++++||.+ |+|++|..++.+|+ . .|++|+++|.+++..+.++++ | .+.-+.....|..+...++ ..+
T Consensus 169 ~~g~~vlV~gag~G~vG~~a~q~a~-~-~Ga~Vi~~~~~~~~~~~~~~l----G-a~~~~~~~~~~~~~~v~~~t~~~g~ 241 (379)
T 3iup_A 169 LEGHSALVHTAAASNLGQMLNQICL-K-DGIKLVNIVRKQEQADLLKAQ----G-AVHVCNAASPTFMQDLTEALVSTGA 241 (379)
T ss_dssp HTTCSCEEESSTTSHHHHHHHHHHH-H-HTCCEEEEESSHHHHHHHHHT----T-CSCEEETTSTTHHHHHHHHHHHHCC
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHH-H-CCCEEEEEECCHHHHHHHHhC----C-CcEEEeCCChHHHHHHHHHhcCCCc
Confidence 678999999 88999999999998 3 577999999999999998874 3 2222333233433322222 379
Q ss_pred cEEEEcCcC
Q 039591 204 DCIFLAALV 212 (284)
Q Consensus 204 D~V~~~~~~ 212 (284)
|+||.+...
T Consensus 242 d~v~d~~g~ 250 (379)
T 3iup_A 242 TIAFDATGG 250 (379)
T ss_dssp CEEEESCEE
T ss_pred eEEEECCCc
Confidence 999988654
No 380
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.00 E-value=0.0013 Score=52.37 Aligned_cols=98 Identities=15% Similarity=0.106 Sum_probs=62.9
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhh--hc--cCCCcc
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQV--KE--KLGEYD 204 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~--~~--~l~~fD 204 (284)
.++++|+.+|+|++|......++ ..|.+|+++|.+++.++.+++ . ....++.+|..+. .. .+..+|
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~--~~g~~V~vid~~~~~~~~~~~---~-----~g~~~~~~d~~~~~~l~~~~~~~ad 86 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLAS--SSGHSVVVVDKNEYAFHRLNS---E-----FSGFTVVGDAAEFETLKECGMEKAD 86 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHH--HTTCEEEEEESCGGGGGGSCT---T-----CCSEEEESCTTSHHHHHTTTGGGCS
T ss_pred cCCCcEEEECCCHHHHHHHHHHH--hCCCeEEEEECCHHHHHHHHh---c-----CCCcEEEecCCCHHHHHHcCcccCC
Confidence 56789999999999987665554 257899999999877643321 1 1245566765431 11 135799
Q ss_pred EEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 205 CIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 205 ~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+|+.+... ......+..+.+.+.+...++.+.
T Consensus 87 ~Vi~~~~~----~~~~~~~~~~~~~~~~~~~iv~~~ 118 (155)
T 2g1u_A 87 MVFAFTND----DSTNFFISMNARYMFNVENVIARV 118 (155)
T ss_dssp EEEECSSC----HHHHHHHHHHHHHTSCCSEEEEEC
T ss_pred EEEEEeCC----cHHHHHHHHHHHHHCCCCeEEEEE
Confidence 99988654 222344444555666667777655
No 381
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=96.98 E-value=0.0031 Score=58.31 Aligned_cols=105 Identities=8% Similarity=-0.052 Sum_probs=67.5
Q ss_pred CCeEEEecCCCChHHHHHHHhh----------------cCCCcEEEEEeCC-----------HHHHHHHHHHHhhccCCC
Q 039591 131 PKKVAFVGSGPMPLTSIVMAKN----------------HLKATHFDNFDID-----------EAANNVARRIVATDFEFE 183 (284)
Q Consensus 131 ~~~VL~iGsGp~G~~ai~la~~----------------~~~~~~V~~vDis-----------~~~~~~A~~~~~~~~~l~ 183 (284)
+-+|+|+||| .|..++.+... ..|..+|+.-|+- |...+..++. .| ..
T Consensus 53 ~~~IaDlGCs-sG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~---~g-~~ 127 (384)
T 2efj_A 53 CFKVGDLGCA-SGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKE---NG-RK 127 (384)
T ss_dssp EEEEEEETCC-SSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHH---TC-CC
T ss_pred ceEEEecCCC-CCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhh---cc-CC
Confidence 5789999999 88888776652 0245678888987 5555443222 12 11
Q ss_pred CCeEEEEcchhhhhccC---CCccEEEEcCcCCCCH------H--------------------------------HHHHH
Q 039591 184 KRMKFLTGDILQVKEKL---GEYDCIFLAALVGMSK------E--------------------------------EKMKI 222 (284)
Q Consensus 184 ~~v~~~~~D~~~~~~~l---~~fD~V~~~~~~~~~~------~--------------------------------~k~~~ 222 (284)
.+-.|+.|....+...+ +.+|+|+++...+|-. . |-..+
T Consensus 128 ~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~F 207 (384)
T 2efj_A 128 IGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTF 207 (384)
T ss_dssp TTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 23577777665543333 7899999987654421 0 11233
Q ss_pred HHHHHhccccCcEEEEEe
Q 039591 223 IRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 223 l~~~~~~L~pGG~lv~~~ 240 (284)
++.-++.|+|||++++..
T Consensus 208 L~~Ra~eL~pGG~mvl~~ 225 (384)
T 2efj_A 208 LRIHSEELISRGRMLLTF 225 (384)
T ss_dssp HHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHhccCCeEEEEE
Confidence 677789999999999876
No 382
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=96.94 E-value=0.0084 Score=53.10 Aligned_cols=98 Identities=16% Similarity=0.162 Sum_probs=66.7
Q ss_pred CeEEEecCCCChHH-HHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhh-------ccCCC-------------CCeEEEE
Q 039591 132 KKVAFVGSGPMPLT-SIVMAKNHLKATHFDNFDIDEAANNVARRIVAT-------DFEFE-------------KRMKFLT 190 (284)
Q Consensus 132 ~~VL~iGsGp~G~~-ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~-------~~~l~-------------~~v~~~~ 190 (284)
++|.+||+|.+|.. +..+++ .|.+|+.+|++++.++.+++.+.. .|.+. .++++ .
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~---~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~-~ 91 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAA---TGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIAT-S 91 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---TTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEE-E
T ss_pred CEEEEECCCHHHHHHHHHHHh---CCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEE-e
Confidence 58999999988863 445665 578999999999999887553221 12111 13444 3
Q ss_pred cchhhhhccCCCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEE
Q 039591 191 GDILQVKEKLGEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLV 238 (284)
Q Consensus 191 ~D~~~~~~~l~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~ 238 (284)
.|..+ .+...|+|+.+... ....|..+++++.+.++|+.+++.
T Consensus 92 ~~~~~---~~~~aD~Vi~avp~--~~~~~~~v~~~l~~~~~~~~iv~s 134 (302)
T 1f0y_A 92 TDAAS---VVHSTDLVVEAIVE--NLKVKNELFKRLDKFAAEHTIFAS 134 (302)
T ss_dssp SCHHH---HTTSCSEEEECCCS--CHHHHHHHHHHHTTTSCTTCEEEE
T ss_pred cCHHH---hhcCCCEEEEcCcC--cHHHHHHHHHHHHhhCCCCeEEEE
Confidence 44432 24679999998653 234578899999999999886653
No 383
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=96.93 E-value=0.0031 Score=55.53 Aligned_cols=99 Identities=16% Similarity=0.203 Sum_probs=68.8
Q ss_pred CeEEEecCCCChHHHHH-HHhhcCCCcEEEEEeCCHHHHHHHHHHHhhc-------c-CCC--------CCeEEEEcchh
Q 039591 132 KKVAFVGSGPMPLTSIV-MAKNHLKATHFDNFDIDEAANNVARRIVATD-------F-EFE--------KRMKFLTGDIL 194 (284)
Q Consensus 132 ~~VL~iGsGp~G~~ai~-la~~~~~~~~V~~vDis~~~~~~A~~~~~~~-------~-~l~--------~~v~~~~~D~~ 194 (284)
++|..||+|.+|..... +++ .|.+|+.+|++++.++.+++.+... + .+. .++++ ..|..
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~---~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~ 80 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAF---HGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLA 80 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---TTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHh---CCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHH
Confidence 58999999988866433 444 5789999999999999888763211 0 000 12333 34443
Q ss_pred hhhccCCCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEE
Q 039591 195 QVKEKLGEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVR 239 (284)
Q Consensus 195 ~~~~~l~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~ 239 (284)
+ .+...|+|+.+... ..+.+..+++++.+.++|+.+++-.
T Consensus 81 ~---~~~~aDlVi~av~~--~~~~~~~v~~~l~~~~~~~~il~s~ 120 (283)
T 4e12_A 81 Q---AVKDADLVIEAVPE--SLDLKRDIYTKLGELAPAKTIFATN 120 (283)
T ss_dssp H---HTTTCSEEEECCCS--CHHHHHHHHHHHHHHSCTTCEEEEC
T ss_pred H---HhccCCEEEEeccC--cHHHHHHHHHHHHhhCCCCcEEEEC
Confidence 2 23679999998654 3457889999999999999887643
No 384
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=96.88 E-value=0.00043 Score=64.46 Aligned_cols=98 Identities=27% Similarity=0.356 Sum_probs=64.2
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcch---------------
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDI--------------- 193 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~--------------- 193 (284)
.++.+|+.+|+|+.|..++.+++ . .|++|+++|.++...+.++++ | . +++..|.
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~-~-~Ga~V~v~D~~~~~~~~~~~l----G---a--~~~~~~~~~~~~~~~g~~~~~~ 238 (401)
T 1x13_A 170 VPPAKVMVIGAGVAGLAAIGAAN-S-LGAIVRAFDTRPEVKEQVQSM----G---A--EFLELDFKEEAGSGDGYAKVMS 238 (401)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHH-H-TTCEEEEECSCGGGHHHHHHT----T---C--EECCC--------CCHHHHHHS
T ss_pred cCCCEEEEECCCHHHHHHHHHHH-H-CCCEEEEEcCCHHHHHHHHHc----C---C--EEEEecccccccccccchhhcc
Confidence 36889999999999999999887 3 467999999999988877543 2 1 1111010
Q ss_pred h--------hhhccCCCccEEEEcCcC-CCCHHHHHHHH-HHHHhccccCcEEEEEe
Q 039591 194 L--------QVKEKLGEYDCIFLAALV-GMSKEEKMKII-RHIRKYMKDGGILLVRS 240 (284)
Q Consensus 194 ~--------~~~~~l~~fD~V~~~~~~-~~~~~~k~~~l-~~~~~~L~pGG~lv~~~ 240 (284)
. .+...+..+|+|+.+.+. +.. ...++ ++..+.|+|||+++..+
T Consensus 239 ~~~~~~~~~~l~e~~~~aDvVI~~~~~pg~~---ap~li~~~~l~~mk~g~vIVdva 292 (401)
T 1x13_A 239 DAFIKAEMELFAAQAKEVDIIVTTALIPGKP---APKLITREMVDSMKAGSVIVDLA 292 (401)
T ss_dssp HHHHHHHHHHHHHHHHHCSEEEECCCCTTSC---CCCCBCHHHHHTSCTTCEEEETT
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCccCCCC---CCeeeCHHHHhcCCCCcEEEEEc
Confidence 0 011112468999988544 211 01222 45677899999988765
No 385
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=96.84 E-value=0.0098 Score=53.35 Aligned_cols=108 Identities=14% Similarity=0.107 Sum_probs=75.9
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccC-CCCCeEEEEcchhhh-hccC--CCcc
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFE-FEKRMKFLTGDILQV-KEKL--GEYD 204 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~-l~~~v~~~~~D~~~~-~~~l--~~fD 204 (284)
.....|+++||| +.-.+..+.. ..+.+++-+| .|..++..++.+...+. ...+..++.+|+.+. ...+ ..||
T Consensus 101 ~g~~QvV~LGaG-lDTra~Rl~~--~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d 176 (310)
T 2uyo_A 101 DGIRQFVILASG-LDSRAYRLDW--PTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFD 176 (310)
T ss_dssp TTCCEEEEETCT-TCCHHHHSCC--CTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCC
T ss_pred hCCCeEEEeCCC-CCchhhhccC--CCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCC
Confidence 345789999999 8876555542 2357899999 69999999999875331 246789999998751 1111 2333
Q ss_pred ----EEEEc-CcC-CCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 205 ----CIFLA-ALV-GMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 205 ----~V~~~-~~~-~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
++|+. +.. .+.+++...+++.+.+...||+.|++..
T Consensus 177 ~~~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~ 218 (310)
T 2uyo_A 177 PSARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVET 218 (310)
T ss_dssp TTSCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEC
T ss_pred CCCCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEe
Confidence 34433 322 4556777899999999999999999876
No 386
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=96.84 E-value=0.0025 Score=58.76 Aligned_cols=109 Identities=12% Similarity=0.035 Sum_probs=63.9
Q ss_pred CCeEEEecCCCChHHHHHHHhh-------c-------CCCcEEEEEeCCHHHHHHHHHHHhhcc----------CCCCCe
Q 039591 131 PKKVAFVGSGPMPLTSIVMAKN-------H-------LKATHFDNFDIDEAANNVARRIVATDF----------EFEKRM 186 (284)
Q Consensus 131 ~~~VL~iGsGp~G~~ai~la~~-------~-------~~~~~V~~vDis~~~~~~A~~~~~~~~----------~l~~~v 186 (284)
+.+|+|+||| .|-.++.+... . .|..+|..-|+-..--..-=+.+.... +...+-
T Consensus 53 ~~~IaDlGCs-sG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~ 131 (374)
T 3b5i_A 53 PFTAVDLGCS-SGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRS 131 (374)
T ss_dssp CEEEEEETCC-SSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBC
T ss_pred ceEEEecCCC-CChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCc
Confidence 5789999999 78777766211 1 155678888865443322222222110 000122
Q ss_pred EEEEcchhhhh---ccCCCccEEEEcCcCCCCH-------------------------------------HHHHHHHHHH
Q 039591 187 KFLTGDILQVK---EKLGEYDCIFLAALVGMSK-------------------------------------EEKMKIIRHI 226 (284)
Q Consensus 187 ~~~~~D~~~~~---~~l~~fD~V~~~~~~~~~~-------------------------------------~~k~~~l~~~ 226 (284)
.|+.|....+. .+-+.||+|+++...+|-. .|-..+++..
T Consensus 132 ~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~r 211 (374)
T 3b5i_A 132 YFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRAR 211 (374)
T ss_dssp SEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444433322 2237899999987654421 1445678888
Q ss_pred HhccccCcEEEEEe
Q 039591 227 RKYMKDGGILLVRS 240 (284)
Q Consensus 227 ~~~L~pGG~lv~~~ 240 (284)
++.|+|||++++..
T Consensus 212 a~eL~pGG~mvl~~ 225 (374)
T 3b5i_A 212 AAEVKRGGAMFLVC 225 (374)
T ss_dssp HHHEEEEEEEEEEE
T ss_pred HHHhCCCCEEEEEE
Confidence 99999999999765
No 387
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=96.84 E-value=0.00074 Score=62.41 Aligned_cols=101 Identities=21% Similarity=0.227 Sum_probs=64.6
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCe--EEE---------------Ec
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRM--KFL---------------TG 191 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v--~~~---------------~~ 191 (284)
.++.+|+.+|+|+.|..++.+++ . .|++|+.+|.++...+.++++ |. ..+ ..- ..
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~-~-~Ga~V~~~d~~~~~~~~~~~~----Ga--~~~~i~~~~~~~~~~~~~~~~~~s~ 241 (384)
T 1l7d_A 170 VPPARVLVFGVGVAGLQAIATAK-R-LGAVVMATDVRAATKEQVESL----GG--KFITVDDEAMKTAETAGGYAKEMGE 241 (384)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHH-H-TTCEEEEECSCSTTHHHHHHT----TC--EECCC--------------------
T ss_pred CCCCEEEEECCCHHHHHHHHHHH-H-CCCEEEEEeCCHHHHHHHHHc----CC--eEEeecccccccccccccchhhcCH
Confidence 36899999999999999999888 3 467899999999888877653 20 000 010 00
Q ss_pred c-----hhhhhccCCCccEEEEcCcC-CCCHHHHHHH-HHHHHhccccCcEEEEEe
Q 039591 192 D-----ILQVKEKLGEYDCIFLAALV-GMSKEEKMKI-IRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 192 D-----~~~~~~~l~~fD~V~~~~~~-~~~~~~k~~~-l~~~~~~L~pGG~lv~~~ 240 (284)
| .......+..+|+|+.+.+. +.. . ..+ .++..+.|||||+++-.+
T Consensus 242 ~~~~~~~~~l~~~~~~aDvVi~~~~~pg~~--~-~~li~~~~l~~mk~g~vivdva 294 (384)
T 1l7d_A 242 EFRKKQAEAVLKELVKTDIAITTALIPGKP--A-PVLITEEMVTKMKPGSVIIDLA 294 (384)
T ss_dssp ---CCHHHHHHHHHTTCSEEEECCCCTTSC--C-CCCSCHHHHTTSCTTCEEEETT
T ss_pred HHHhhhHHHHHHHhCCCCEEEECCccCCCC--C-CeeeCHHHHhcCCCCCEEEEEe
Confidence 0 00011122679999987744 211 0 112 256678899999988655
No 388
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.81 E-value=0.0084 Score=46.59 Aligned_cols=94 Identities=10% Similarity=0.023 Sum_probs=61.9
Q ss_pred CCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhh--c--cCCCccEE
Q 039591 131 PKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVK--E--KLGEYDCI 206 (284)
Q Consensus 131 ~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~--~--~l~~fD~V 206 (284)
.++|+.+|+|..|........ ..|.+|+++|.+++.++.+++. .+.++.+|..+.. . ....+|+|
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~--~~g~~V~~id~~~~~~~~~~~~---------~~~~~~gd~~~~~~l~~~~~~~~d~v 74 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELT--AAGKKVLAVDKSKEKIELLEDE---------GFDAVIADPTDESFYRSLDLEGVSAV 74 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHH--HTTCCEEEEESCHHHHHHHHHT---------TCEEEECCTTCHHHHHHSCCTTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHH--HCCCeEEEEECCHHHHHHHHHC---------CCcEEECCCCCHHHHHhCCcccCCEE
Confidence 458999999988876544333 2578999999999988766542 2567788886531 1 23679999
Q ss_pred EEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 207 FLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 207 ~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+.+... .+. ........+.+. ...++.+.
T Consensus 75 i~~~~~---~~~-n~~~~~~a~~~~-~~~iia~~ 103 (141)
T 3llv_A 75 LITGSD---DEF-NLKILKALRSVS-DVYAIVRV 103 (141)
T ss_dssp EECCSC---HHH-HHHHHHHHHHHC-CCCEEEEE
T ss_pred EEecCC---HHH-HHHHHHHHHHhC-CceEEEEE
Confidence 987653 222 333444455566 66666665
No 389
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.81 E-value=0.0095 Score=47.12 Aligned_cols=98 Identities=8% Similarity=0.080 Sum_probs=66.2
Q ss_pred CCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCC-HHHHHHHHHHHhhccCCCCCeEEEEcchhhhh--c--cCCCccE
Q 039591 131 PKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDID-EAANNVARRIVATDFEFEKRMKFLTGDILQVK--E--KLGEYDC 205 (284)
Q Consensus 131 ~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis-~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~--~--~l~~fD~ 205 (284)
..+|+.+|+|..|........ ..|..|+.+|.+ ++..+..++... ..+.++.+|..+.. . .++.+|+
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~--~~g~~V~vid~~~~~~~~~~~~~~~------~~~~~i~gd~~~~~~l~~a~i~~ad~ 74 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLN--QRGQNVTVISNLPEDDIKQLEQRLG------DNADVIPGDSNDSSVLKKAGIDRCRA 74 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHH--HTTCCEEEEECCCHHHHHHHHHHHC------TTCEEEESCTTSHHHHHHHTTTTCSE
T ss_pred CCcEEEECCCHHHHHHHHHHH--HCCCCEEEEECCChHHHHHHHHhhc------CCCeEEEcCCCCHHHHHHcChhhCCE
Confidence 468999999988866554333 257899999998 565544443321 34788899986531 1 2578999
Q ss_pred EEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 206 IFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 206 V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|+.+... ......+....+.+.|...++.+.
T Consensus 75 vi~~~~~----d~~n~~~~~~a~~~~~~~~ii~~~ 105 (153)
T 1id1_A 75 ILALSDN----DADNAFVVLSAKDMSSDVKTVLAV 105 (153)
T ss_dssp EEECSSC----HHHHHHHHHHHHHHTSSSCEEEEC
T ss_pred EEEecCC----hHHHHHHHHHHHHHCCCCEEEEEE
Confidence 9988654 334455566677787888888765
No 390
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=96.75 E-value=0.0096 Score=52.90 Aligned_cols=99 Identities=20% Similarity=0.248 Sum_probs=64.9
Q ss_pred CCCCeEEEecC----CCChHHHHHHHhhcCCC-cEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCc
Q 039591 129 VQPKKVAFVGS----GPMPLTSIVMAKNHLKA-THFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEY 203 (284)
Q Consensus 129 ~~~~~VL~iGs----Gp~G~~ai~la~~~~~~-~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~f 203 (284)
+.+.+|||+|+ |-.|-+ ..+.+ ..+. +.|+++|+.|-. .. .. .+++||..+... .++|
T Consensus 108 p~gmrVLDLGA~s~kg~APGS-~VLr~-~~p~g~~VVavDL~~~~---------sd----a~-~~IqGD~~~~~~-~~k~ 170 (344)
T 3r24_A 108 PYNMRVIHFGAGSDKGVAPGT-AVLRQ-WLPTGTLLVDSDLNDFV---------SD----AD-STLIGDCATVHT-ANKW 170 (344)
T ss_dssp CTTCEEEEESCCCTTSBCHHH-HHHHH-HSCTTCEEEEEESSCCB---------CS----SS-EEEESCGGGEEE-SSCE
T ss_pred cCCCEEEeCCCCCCCCCCCcH-HHHHH-hCCCCcEEEEeeCcccc---------cC----CC-eEEEcccccccc-CCCC
Confidence 77899999997 212323 34555 4564 699999997632 11 22 558999765322 3789
Q ss_pred cEEEEcCcC---CCC-------HHHHHHHHHHHHhccccCcEEEEEeccch
Q 039591 204 DCIFLAALV---GMS-------KEEKMKIIRHIRKYMKDGGILLVRSAKGA 244 (284)
Q Consensus 204 D~V~~~~~~---~~~-------~~~k~~~l~~~~~~L~pGG~lv~~~~~g~ 244 (284)
|+|+++... |.. ..--+.+++-+.++|+|||-+++.-..|.
T Consensus 171 DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGs 221 (344)
T 3r24_A 171 DLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHS 221 (344)
T ss_dssp EEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSS
T ss_pred CEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCC
Confidence 999997432 221 11235667777889999999999775443
No 391
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=96.74 E-value=0.0057 Score=54.86 Aligned_cols=92 Identities=16% Similarity=0.151 Sum_probs=63.2
Q ss_pred CCeEEEecCCCChHHHH-HHHhhcCCCc--EEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEE
Q 039591 131 PKKVAFVGSGPMPLTSI-VMAKNHLKAT--HFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIF 207 (284)
Q Consensus 131 ~~~VL~iGsGp~G~~ai-~la~~~~~~~--~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~ 207 (284)
..+|.+||+|-+|.+-. .+++ .|. +|+++|.+++.++.+++. | ..+ . ...|..+. .....|+|+
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~---~G~~~~V~~~dr~~~~~~~a~~~----G-~~~--~-~~~~~~~~--~~~~aDvVi 99 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRR---SGFKGKIYGYDINPESISKAVDL----G-IID--E-GTTSIAKV--EDFSPDFVM 99 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHH---TTCCSEEEEECSCHHHHHHHHHT----T-SCS--E-EESCTTGG--GGGCCSEEE
T ss_pred CCEEEEEeeCHHHHHHHHHHHh---CCCCCEEEEEECCHHHHHHHHHC----C-Ccc--h-hcCCHHHH--hhccCCEEE
Confidence 36899999998886533 3444 455 899999999988877643 3 111 1 23444320 135799999
Q ss_pred EcCcCCCCHHHHHHHHHHHHhccccCcEEEEE
Q 039591 208 LAALVGMSKEEKMKIIRHIRKYMKDGGILLVR 239 (284)
Q Consensus 208 ~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~ 239 (284)
++... ....++++++.+.++||.+++-.
T Consensus 100 lavp~----~~~~~vl~~l~~~l~~~~iv~d~ 127 (314)
T 3ggo_A 100 LSSPV----RTFREIAKKLSYILSEDATVTDQ 127 (314)
T ss_dssp ECSCG----GGHHHHHHHHHHHSCTTCEEEEC
T ss_pred EeCCH----HHHHHHHHHHhhccCCCcEEEEC
Confidence 99765 23467889999999999877643
No 392
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.63 E-value=0.0042 Score=56.77 Aligned_cols=60 Identities=10% Similarity=0.092 Sum_probs=46.3
Q ss_pred CCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhh
Q 039591 130 QPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQV 196 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~ 196 (284)
+++.|+|||.|+ |..+..|+. ...+.+|+++|+|+..+...++.. . ..+++++.+|+.++
T Consensus 58 ~~~~VlEIGPG~-G~LT~~Ll~-~~~~~~vvavE~D~~l~~~L~~~~-~----~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 58 EELKVLDLYPGV-GIQSAIFYN-KYCPRQYSLLEKRSSLYKFLNAKF-E----GSPLQILKRDPYDW 117 (353)
T ss_dssp TTCEEEEESCTT-CHHHHHHHH-HHCCSEEEEECCCHHHHHHHHHHT-T----TSSCEEECSCTTCH
T ss_pred CCCEEEEECCCC-CHHHHHHHh-hCCCCEEEEEecCHHHHHHHHHhc-c----CCCEEEEECCccch
Confidence 468999999995 555555554 124578999999999999888875 2 25899999999765
No 393
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=96.60 E-value=0.02 Score=54.10 Aligned_cols=98 Identities=17% Similarity=0.246 Sum_probs=67.4
Q ss_pred CCeEEEecCCCChHHHH-HHHhhcCCCcEEEEEeCCHHHHHHHHHHHhh-------ccCC------CCCeEEEEcchhhh
Q 039591 131 PKKVAFVGSGPMPLTSI-VMAKNHLKATHFDNFDIDEAANNVARRIVAT-------DFEF------EKRMKFLTGDILQV 196 (284)
Q Consensus 131 ~~~VL~iGsGp~G~~ai-~la~~~~~~~~V~~vDis~~~~~~A~~~~~~-------~~~l------~~~v~~~~~D~~~~ 196 (284)
-++|..||+|.+|.... .+++ .|..|+.+|++++.++.+++.+.. .+.+ .....+ ..|..
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~---~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~-- 110 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFAR---VGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTK-- 110 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT---TTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGG--
T ss_pred CCEEEEECcCHHHHHHHHHHHh---CCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHH--
Confidence 35899999998886533 3444 678999999999999888763321 0100 011233 44542
Q ss_pred hccCCCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEE
Q 039591 197 KEKLGEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLV 238 (284)
Q Consensus 197 ~~~l~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~ 238 (284)
.+...|+||.+... ...-|..+++++.+.++||.+|+.
T Consensus 111 --~~~~aDlVIeaVpe--~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 111 --ELSTVDLVVEAVFE--DMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp --GGTTCSEEEECCCS--CHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred --HHCCCCEEEEcCCC--CHHHHHHHHHHHHhhCCCCeEEEe
Confidence 34679999999754 335678899999999999988775
No 394
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=96.60 E-value=0.00076 Score=68.15 Aligned_cols=95 Identities=12% Similarity=0.024 Sum_probs=62.7
Q ss_pred CCCCeEEEecC-CCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC---CCcc
Q 039591 129 VQPKKVAFVGS-GPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL---GEYD 204 (284)
Q Consensus 129 ~~~~~VL~iGs-Gp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l---~~fD 204 (284)
+++++||..|+ |+.|+.++.+|+ ..|++|++++.++ ..+..+ +| .+.-+.....|..+...+. .++|
T Consensus 344 ~~G~~VLI~gaaGgvG~~aiqlAk--~~Ga~V~~t~~~~-k~~~l~-----lg-a~~v~~~~~~~~~~~i~~~t~g~GvD 414 (795)
T 3slk_A 344 RPGESLLVHSAAGGVGMAAIQLAR--HLGAEVYATASED-KWQAVE-----LS-REHLASSRTCDFEQQFLGATGGRGVD 414 (795)
T ss_dssp CTTCCEEEESTTBHHHHHHHHHHH--HTTCCEEEECCGG-GGGGSC-----SC-GGGEECSSSSTHHHHHHHHSCSSCCS
T ss_pred CCCCEEEEecCCCHHHHHHHHHHH--HcCCEEEEEeChH-Hhhhhh-----cC-hhheeecCChhHHHHHHHHcCCCCeE
Confidence 78999999994 889999999999 3678999998665 222111 23 1111222223333222111 4799
Q ss_pred EEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 205 CIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 205 ~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+|+.+... +.++...+.|+|||+++..+
T Consensus 415 vVld~~gg--------~~~~~~l~~l~~~Gr~v~iG 442 (795)
T 3slk_A 415 VVLNSLAG--------EFADASLRMLPRGGRFLELG 442 (795)
T ss_dssp EEEECCCT--------TTTHHHHTSCTTCEEEEECC
T ss_pred EEEECCCc--------HHHHHHHHHhcCCCEEEEec
Confidence 99986532 34678889999999999865
No 395
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=96.60 E-value=0.007 Score=56.46 Aligned_cols=96 Identities=15% Similarity=0.095 Sum_probs=70.2
Q ss_pred CCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhh--c--cCCCccE
Q 039591 130 QPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVK--E--KLGEYDC 205 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~--~--~l~~fD~ 205 (284)
...+|+.+|+|..|.......+ ..|..|+++|.|++.++.+++. | +.++.||+.+.. . .++..|+
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~--~~g~~vvvId~d~~~v~~~~~~----g-----~~vi~GDat~~~~L~~agi~~A~~ 71 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLL--SSGVKMVVLDHDPDHIETLRKF----G-----MKVFYGDATRMDLLESAGAAKAEV 71 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHH--HTTCCEEEEECCHHHHHHHHHT----T-----CCCEESCTTCHHHHHHTTTTTCSE
T ss_pred CCCeEEEECCCHHHHHHHHHHH--HCCCCEEEEECCHHHHHHHHhC----C-----CeEEEcCCCCHHHHHhcCCCccCE
Confidence 3468999999988887665544 2678999999999999887642 3 456789987631 1 2478999
Q ss_pred EEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 206 IFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 206 V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|+++... ......+-...+.+.|...++.+.
T Consensus 72 viv~~~~----~~~n~~i~~~ar~~~p~~~Iiara 102 (413)
T 3l9w_A 72 LINAIDD----PQTNLQLTEMVKEHFPHLQIIARA 102 (413)
T ss_dssp EEECCSS----HHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred EEECCCC----hHHHHHHHHHHHHhCCCCeEEEEE
Confidence 9987653 344555566677889998998876
No 396
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=96.60 E-value=0.031 Score=50.00 Aligned_cols=106 Identities=16% Similarity=0.136 Sum_probs=66.2
Q ss_pred CCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHH-HHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 130 QPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNV-ARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~-A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
...+|..||+|.+|.+............+|+.+|++++..+- +..+......+...+++..++. .++...|+|++
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~----~al~~aDvVii 80 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY----DDCRDADLVVI 80 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG----GGTTTCSEEEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcH----HHhCCCCEEEE
Confidence 457999999998888755443312234589999999985553 3444433221222566654432 24578999999
Q ss_pred cCcCCCCH------------HHHHHHHHHHHhccccCcEEEEEe
Q 039591 209 AALVGMSK------------EEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~~~~~------------~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
++.+...+ .-+.++.+.+.++ .|++.+++.+
T Consensus 81 a~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~~iv~t 123 (316)
T 1ldn_A 81 CAGANQKPGETRLDLVDKNIAIFRSIVESVMAS-GFQGLFLVAT 123 (316)
T ss_dssp CCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHH-TCCSEEEECS
T ss_pred cCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHH-CCCCEEEEeC
Confidence 97664321 2346667777666 4888877644
No 397
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.58 E-value=0.0052 Score=53.47 Aligned_cols=47 Identities=21% Similarity=0.103 Sum_probs=41.9
Q ss_pred cCCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhh
Q 039591 128 VVQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVAT 178 (284)
Q Consensus 128 ~~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~ 178 (284)
..+++.|||..|| +|.+++...+ .|.+++++|+++.+++.|+++++.
T Consensus 210 ~~~~~~vlD~f~G-sGtt~~~a~~---~gr~~ig~e~~~~~~~~~~~r~~~ 256 (260)
T 1g60_A 210 SNPNDLVLDCFMG-SGTTAIVAKK---LGRNFIGCDMNAEYVNQANFVLNQ 256 (260)
T ss_dssp CCTTCEEEESSCT-TCHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHC
T ss_pred CCCCCEEEECCCC-CCHHHHHHHH---cCCeEEEEeCCHHHHHHHHHHHHh
Confidence 3688999999999 9999888776 578999999999999999999875
No 398
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=96.54 E-value=0.0024 Score=58.48 Aligned_cols=108 Identities=11% Similarity=0.035 Sum_probs=71.9
Q ss_pred CCeEEEecCCCChHHHHHHHhh---------------cCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhh
Q 039591 131 PKKVAFVGSGPMPLTSIVMAKN---------------HLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQ 195 (284)
Q Consensus 131 ~~~VL~iGsGp~G~~ai~la~~---------------~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~ 195 (284)
+-+|+|+||+ .|..++.+... ..|..+|+.-|+-.......-+.+..+. ...+-.|+.|....
T Consensus 52 ~~~IaDlGCs-~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~-~~~~~~f~~gvpgS 129 (359)
T 1m6e_X 52 RLAIADLGCS-SGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEN-DVDGVCFINGVPGS 129 (359)
T ss_dssp EECCEEESCC-SSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSC-SCTTCEEEEEEESC
T ss_pred ceEEEecCCC-CCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhc-ccCCCEEEEecchh
Confidence 4578999999 88777765542 1345688999987777766655543211 01134677776554
Q ss_pred hhc---cCCCccEEEEcCcCCCC--------------------------------HHHHHHHHHHHHhccccCcEEEEEe
Q 039591 196 VKE---KLGEYDCIFLAALVGMS--------------------------------KEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 196 ~~~---~l~~fD~V~~~~~~~~~--------------------------------~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+.. +-+.+|+|+++...+|- ..|-..+++.-++.|+|||++++..
T Consensus 130 Fy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~ 209 (359)
T 1m6e_X 130 FYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTI 209 (359)
T ss_dssp SSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEE
T ss_pred hhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 332 23789999987654431 1234567888899999999999865
No 399
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=96.54 E-value=0.0037 Score=70.36 Aligned_cols=102 Identities=9% Similarity=-0.065 Sum_probs=72.0
Q ss_pred cCCCCeEEEec-CCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccC---CCc
Q 039591 128 VVQPKKVAFVG-SGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKL---GEY 203 (284)
Q Consensus 128 ~~~~~~VL~iG-sGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l---~~f 203 (284)
.+++++||..| +|++|..++.+|+ ..|++|++++.+++..+.+++....++ ...-+.....|..+...+. .++
T Consensus 1665 l~~Ge~VLI~gaaGgVG~aAiqlAk--~~Ga~Viat~~s~~k~~~l~~~~~~lg-a~~v~~~~~~~~~~~i~~~t~g~Gv 1741 (2512)
T 2vz8_A 1665 MQPGESVLIHSGSGGVGQAAIAIAL--SRGCRVFTTVGSAEKRAYLQARFPQLD-ETCFANSRDTSFEQHVLRHTAGKGV 1741 (2512)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHH--HTTCEEEEEESCHHHHHHHHHHCTTCC-STTEEESSSSHHHHHHHHTTTSCCE
T ss_pred CCCCCEEEEEeCChHHHHHHHHHHH--HcCCEEEEEeCChhhhHHHHhhcCCCC-ceEEecCCCHHHHHHHHHhcCCCCc
Confidence 37899999997 4889999999998 367899999999999998887543223 1111222223333222222 469
Q ss_pred cEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 204 DCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 204 D~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|+|+.+.. .+.+....+.|++||+++..+
T Consensus 1742 DvVld~~g--------~~~l~~~l~~L~~~Gr~V~iG 1770 (2512)
T 2vz8_A 1742 DLVLNSLA--------EEKLQASVRCLAQHGRFLEIG 1770 (2512)
T ss_dssp EEEEECCC--------HHHHHHHHTTEEEEEEEEECC
T ss_pred eEEEECCC--------chHHHHHHHhcCCCcEEEEee
Confidence 99997642 356888999999999998754
No 400
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=96.50 E-value=0.016 Score=54.70 Aligned_cols=102 Identities=22% Similarity=0.217 Sum_probs=68.1
Q ss_pred CeEEEecCCCChHHHH-HHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhc--cCC---------CCCeEEEEcchhhhhcc
Q 039591 132 KKVAFVGSGPMPLTSI-VMAKNHLKATHFDNFDIDEAANNVARRIVATD--FEF---------EKRMKFLTGDILQVKEK 199 (284)
Q Consensus 132 ~~VL~iGsGp~G~~ai-~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~--~~l---------~~~v~~~~~D~~~~~~~ 199 (284)
.+|..||+|-+|.... .|++ .|.+|+++|++++.++..++..... .++ ..++++ +.|..+.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~---~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~-t~d~~ea--- 75 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAE---LGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRF-GTEIEQA--- 75 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---TTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEE-ESCHHHH---
T ss_pred CEEEEECcCHHHHHHHHHHHh---cCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEE-ECCHHHH---
Confidence 5899999998887643 4555 5789999999999988776521100 000 134554 3454432
Q ss_pred CCCccEEEEcCcCCC------CHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 200 LGEYDCIFLAALVGM------SKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 200 l~~fD~V~~~~~~~~------~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+...|+||++.+... +......+++.+.+.+++|.+++..+
T Consensus 76 ~~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~S 122 (450)
T 3gg2_A 76 VPEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKS 122 (450)
T ss_dssp GGGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred HhcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEee
Confidence 256899999865421 01255788899999999998888766
No 401
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.49 E-value=0.015 Score=48.81 Aligned_cols=95 Identities=9% Similarity=0.010 Sum_probs=64.7
Q ss_pred CeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhh----ccCCCccEEE
Q 039591 132 KKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVK----EKLGEYDCIF 207 (284)
Q Consensus 132 ~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~----~~l~~fD~V~ 207 (284)
++|+.+|+|..|........ ..|..|+.+|.+++.++...+. ..+.++.+|..+.. ..+..+|+|+
T Consensus 1 M~iiIiG~G~~G~~la~~L~--~~g~~v~vid~~~~~~~~l~~~--------~~~~~i~gd~~~~~~l~~a~i~~ad~vi 70 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSML--SRKYGVVIINKDRELCEEFAKK--------LKATIIHGDGSHKEILRDAEVSKNDVVV 70 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHH--HTTCCEEEEESCHHHHHHHHHH--------SSSEEEESCTTSHHHHHHHTCCTTCEEE
T ss_pred CEEEEECCCHHHHHHHHHHH--hCCCeEEEEECCHHHHHHHHHH--------cCCeEEEcCCCCHHHHHhcCcccCCEEE
Confidence 36899999987766544332 2578999999999988764432 13567889987531 1247899999
Q ss_pred EcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 208 LAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 208 ~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.+... ......+...++.+.|...++.+.
T Consensus 71 ~~~~~----d~~n~~~~~~a~~~~~~~~iia~~ 99 (218)
T 3l4b_C 71 ILTPR----DEVNLFIAQLVMKDFGVKRVVSLV 99 (218)
T ss_dssp ECCSC----HHHHHHHHHHHHHTSCCCEEEECC
T ss_pred EecCC----cHHHHHHHHHHHHHcCCCeEEEEE
Confidence 87654 333455666666777778887754
No 402
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=96.39 E-value=0.027 Score=48.57 Aligned_cols=105 Identities=12% Similarity=0.214 Sum_probs=72.3
Q ss_pred CCCeEEEecC----CCChHH-HHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhh-------
Q 039591 130 QPKKVAFVGS----GPMPLT-SIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVK------- 197 (284)
Q Consensus 130 ~~~~VL~iGs----Gp~G~~-ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~------- 197 (284)
.+++++.-|+ | +|.. +..|++ .|++|+..|.+++..+.+.+.++..+ ..++.++..|+.+..
T Consensus 5 ~gK~alVTGaa~~~G-IG~aiA~~la~---~Ga~Vvi~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~ 78 (256)
T 4fs3_A 5 ENKTYVIMGIANKRS-IAFGVAKVLDQ---LGAKLVFTYRKERSRKELEKLLEQLN--QPEAHLYQIDVQSDEEVINGFE 78 (256)
T ss_dssp TTCEEEEECCCSTTC-HHHHHHHHHHH---TTCEEEEEESSGGGHHHHHHHHGGGT--CSSCEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCCCch-HHHHHHHHHHH---CCCEEEEEECCHHHHHHHHHHHHhcC--CCcEEEEEccCCCHHHHHHHHH
Confidence 5788999993 5 6653 455776 78999999999999888888877655 257888899987521
Q ss_pred ---ccCCCccEEEEcCcCCC-----------CHHHH-----------HHHHHHHHhccccCcEEEEEe
Q 039591 198 ---EKLGEYDCIFLAALVGM-----------SKEEK-----------MKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 198 ---~~l~~fD~V~~~~~~~~-----------~~~~k-----------~~~l~~~~~~L~pGG~lv~~~ 240 (284)
...++.|+++.++.... ..++- ....+...+.++.||.++..+
T Consensus 79 ~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnis 146 (256)
T 4fs3_A 79 QIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATT 146 (256)
T ss_dssp HHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEE
T ss_pred HHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEe
Confidence 12378999998765321 11111 122344567888999988766
No 403
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=96.38 E-value=0.017 Score=57.03 Aligned_cols=110 Identities=19% Similarity=0.262 Sum_probs=73.6
Q ss_pred CCeEEEecCCCChHHHHHHHhhc---------CC--CcEEEEEeC---CHHHHHHHH-----------HHHhhccC----
Q 039591 131 PKKVAFVGSGPMPLTSIVMAKNH---------LK--ATHFDNFDI---DEAANNVAR-----------RIVATDFE---- 181 (284)
Q Consensus 131 ~~~VL~iGsGp~G~~ai~la~~~---------~~--~~~V~~vDi---s~~~~~~A~-----------~~~~~~~~---- 181 (284)
.-+|+|+|-| +|+..+...+.. .+ ..+++++|. +++-+..+- ++.+.+..
T Consensus 67 ~~~i~e~gfG-~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 67 LFVVAESGFG-TGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp EEEEEEECCT-TSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred ceEEEEeCCc-hHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 3489999999 999988765421 01 246899999 777766433 33322211
Q ss_pred -----C---CCCeEEEEcchhhhhccC-----CCccEEEEcCcCCCCHHH--HHHHHHHHHhccccCcEEEEEec
Q 039591 182 -----F---EKRMKFLTGDILQVKEKL-----GEYDCIFLAALVGMSKEE--KMKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 182 -----l---~~~v~~~~~D~~~~~~~l-----~~fD~V~~~~~~~~~~~~--k~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
+ .-.++...+|+.+....+ ..||++|++++...-.++ ..+++..+++.++|||.+...+.
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~~ 220 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTS 220 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEESCC
T ss_pred ceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEeccC
Confidence 0 124567889998876554 579999999864100011 27899999999999999987653
No 404
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=96.36 E-value=0.02 Score=54.51 Aligned_cols=99 Identities=23% Similarity=0.208 Sum_probs=69.1
Q ss_pred CeEEEecCCCChHH-HHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhh-------ccCCC--------CCeEEEEcchhh
Q 039591 132 KKVAFVGSGPMPLT-SIVMAKNHLKATHFDNFDIDEAANNVARRIVAT-------DFEFE--------KRMKFLTGDILQ 195 (284)
Q Consensus 132 ~~VL~iGsGp~G~~-ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~-------~~~l~--------~~v~~~~~D~~~ 195 (284)
++|.+||+|-+|.. +..+++ .|..|+.+|++++.++.+++.+.+ .|.+. .++++ ..|..
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~---aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~-~~~~~- 80 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAAS---HGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIP-VTDIH- 80 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHH---TTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEE-ECCGG-
T ss_pred CEEEEECcCHHHHHHHHHHHH---CCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeE-eCCHH-
Confidence 58999999987865 344555 678999999999999998764321 01010 13444 23432
Q ss_pred hhccCCCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 196 VKEKLGEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 196 ~~~~l~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.+...|+||.+... ...-|..+++++.+.++|+.+|+..+
T Consensus 81 ---~~~~aDlVIeAVpe--~~~vk~~v~~~l~~~~~~~~Ilasnt 120 (483)
T 3mog_A 81 ---ALAAADLVIEAASE--RLEVKKALFAQLAEVCPPQTLLTTNT 120 (483)
T ss_dssp ---GGGGCSEEEECCCC--CHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred ---HhcCCCEEEEcCCC--cHHHHHHHHHHHHHhhccCcEEEecC
Confidence 23679999998654 34567899999999999999886543
No 405
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=96.35 E-value=0.034 Score=48.79 Aligned_cols=100 Identities=12% Similarity=0.087 Sum_probs=61.0
Q ss_pred CeEEEecCCCChHHHH-HHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCC----CeEEEEcchhhhhccCCCccEE
Q 039591 132 KKVAFVGSGPMPLTSI-VMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEK----RMKFLTGDILQVKEKLGEYDCI 206 (284)
Q Consensus 132 ~~VL~iGsGp~G~~ai-~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~----~v~~~~~D~~~~~~~l~~fD~V 206 (284)
.+|+.||+|.+|..-. .|++ .|.+|+.+|.+++.++..++.-........ ++.+. +..+....+..+|+|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~---~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~v 78 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQ---GGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIF--SPEEIDHQNEQVDLI 78 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---TTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEE--CGGGCCTTSCCCSEE
T ss_pred CeEEEECcCHHHHHHHHHHHh---CCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceee--cchhhcccCCCCCEE
Confidence 4899999998776533 3444 567999999999887766543100000000 01110 111111112379999
Q ss_pred EEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 207 FLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 207 ~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+++... ..-.++++.+.+.++|+..++...
T Consensus 79 i~~v~~----~~~~~v~~~l~~~l~~~~~iv~~~ 108 (316)
T 2ew2_A 79 IALTKA----QQLDAMFKAIQPMITEKTYVLCLL 108 (316)
T ss_dssp EECSCH----HHHHHHHHHHGGGCCTTCEEEECC
T ss_pred EEEecc----ccHHHHHHHHHHhcCCCCEEEEec
Confidence 998753 345778889999999988766543
No 406
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=96.33 E-value=0.017 Score=50.34 Aligned_cols=90 Identities=16% Similarity=0.161 Sum_probs=60.6
Q ss_pred CeEEEecCCCChHHHHH-HHhhcCCCc--EEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCC-CccEEE
Q 039591 132 KKVAFVGSGPMPLTSIV-MAKNHLKAT--HFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLG-EYDCIF 207 (284)
Q Consensus 132 ~~VL~iGsGp~G~~ai~-la~~~~~~~--~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~-~fD~V~ 207 (284)
++|..||+|.+|..... +++ .|. +|+++|.+++.++.+++. | ... . ...|..+ .+. ..|+|+
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~---~g~~~~V~~~d~~~~~~~~~~~~----g-~~~--~-~~~~~~~---~~~~~aDvVi 67 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRR---SGFKGKIYGYDINPESISKAVDL----G-IID--E-GTTSIAK---VEDFSPDFVM 67 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHH---TTCCSEEEEECSCHHHHHHHHHT----T-SCS--E-EESCGGG---GGGTCCSEEE
T ss_pred cEEEEEecCHHHHHHHHHHHh---cCCCcEEEEEeCCHHHHHHHHHC----C-Ccc--c-ccCCHHH---HhcCCCCEEE
Confidence 47999999988876443 333 344 899999999988776532 3 111 1 1234332 235 799999
Q ss_pred EcCcCCCCHHHHHHHHHHHHhccccCcEEEEE
Q 039591 208 LAALVGMSKEEKMKIIRHIRKYMKDGGILLVR 239 (284)
Q Consensus 208 ~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~ 239 (284)
++... .....+++.+.+.+++|.+++..
T Consensus 68 lavp~----~~~~~v~~~l~~~l~~~~iv~~~ 95 (281)
T 2g5c_A 68 LSSPV----RTFREIAKKLSYILSEDATVTDQ 95 (281)
T ss_dssp ECSCH----HHHHHHHHHHHHHSCTTCEEEEC
T ss_pred EcCCH----HHHHHHHHHHHhhCCCCcEEEEC
Confidence 98754 34457888888889999876653
No 407
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=96.32 E-value=0.042 Score=51.90 Aligned_cols=100 Identities=18% Similarity=0.180 Sum_probs=66.4
Q ss_pred CCeEEEecCCCChHH-HHHHHhhcCCCcEEEEEeCCHHHH-HHHHHHHh---hccCC--------CCCeEEEEcchhhhh
Q 039591 131 PKKVAFVGSGPMPLT-SIVMAKNHLKATHFDNFDIDEAAN-NVARRIVA---TDFEF--------EKRMKFLTGDILQVK 197 (284)
Q Consensus 131 ~~~VL~iGsGp~G~~-ai~la~~~~~~~~V~~vDis~~~~-~~A~~~~~---~~~~l--------~~~v~~~~~D~~~~~ 197 (284)
-++|.+||+|.+|.. +..+++ .|..|+.+|++++.. +..+++.+ +.|.+ -.++++ ..|..
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~---aG~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~-t~dl~--- 126 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGL---AGIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKI-TSDFH--- 126 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH---TTCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEE-ESCGG---
T ss_pred CCEEEEECCCHHHHHHHHHHHH---CCCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEE-eCCHH---
Confidence 368999999987865 344555 688999999999832 11111211 11211 134554 34432
Q ss_pred ccCCCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 198 EKLGEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 198 ~~l~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.+...|+||.+... ...-|..+++++.+.++|+.+|+..+
T Consensus 127 -al~~aDlVIeAVpe--~~~vk~~v~~~l~~~~~~~aIlasnT 166 (460)
T 3k6j_A 127 -KLSNCDLIVESVIE--DMKLKKELFANLENICKSTCIFGTNT 166 (460)
T ss_dssp -GCTTCSEEEECCCS--CHHHHHHHHHHHHTTSCTTCEEEECC
T ss_pred -HHccCCEEEEcCCC--CHHHHHHHHHHHHhhCCCCCEEEecC
Confidence 34789999999764 34568899999999999999887544
No 408
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=96.29 E-value=0.0078 Score=56.31 Aligned_cols=89 Identities=15% Similarity=0.064 Sum_probs=61.7
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
..+++|+.+|+|++|......++ ..|++|+++|++|.....|... | .+ ..++.+ .+...|+|+.
T Consensus 218 L~GktV~ViG~G~IGk~vA~~Lr--a~Ga~Viv~D~dp~ra~~A~~~----G-----~~--v~~Lee---al~~ADIVi~ 281 (435)
T 3gvp_A 218 FGGKQVVVCGYGEVGKGCCAALK--AMGSIVYVTEIDPICALQACMD----G-----FR--LVKLNE---VIRQVDIVIT 281 (435)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHH--HTTCEEEEECSCHHHHHHHHHT----T-----CE--ECCHHH---HTTTCSEEEE
T ss_pred ecCCEEEEEeeCHHHHHHHHHHH--HCCCEEEEEeCChhhhHHHHHc----C-----CE--eccHHH---HHhcCCEEEE
Confidence 57899999999999998888887 3578999999999766554321 2 12 234433 2367999999
Q ss_pred cCcCCCCHHHHHHHH-HHHHhccccCcEEEEEe
Q 039591 209 AALVGMSKEEKMKII-RHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~~~~~~~k~~~l-~~~~~~L~pGG~lv~~~ 240 (284)
+... ..++ .+..+.||+|++|+-.+
T Consensus 282 atgt-------~~lI~~e~l~~MK~gailINvg 307 (435)
T 3gvp_A 282 CTGN-------KNVVTREHLDRMKNSCIVCNMG 307 (435)
T ss_dssp CSSC-------SCSBCHHHHHHSCTTEEEEECS
T ss_pred CCCC-------cccCCHHHHHhcCCCcEEEEec
Confidence 6432 1222 25667899998776543
No 409
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=96.27 E-value=0.044 Score=47.08 Aligned_cols=106 Identities=11% Similarity=0.168 Sum_probs=71.6
Q ss_pred CCCeEEEecCC-C--ChHH-HHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhh--------
Q 039591 130 QPKKVAFVGSG-P--MPLT-SIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVK-------- 197 (284)
Q Consensus 130 ~~~~VL~iGsG-p--~G~~-ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~-------- 197 (284)
.++++|..|++ . +|.. +..|++ .|++|+.++.++...+.+.+..+..+ ..++.++..|+.+..
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~---~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~ 80 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHE---AGARLIFTYAGERLEKSVHELAGTLD--RNDSIILPCDVTNDAEIETCFAS 80 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHH---TTCEEEEEESSGGGHHHHHHHHHTSS--SCCCEEEECCCSSSHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHH---CCCEEEEecCchHHHHHHHHHHHhcC--CCCceEEeCCCCCHHHHHHHHHH
Confidence 46789999954 1 4543 334555 68999999999877777777766544 247899999987632
Q ss_pred --ccCCCccEEEEcCcCCC-----------CHHHH-----------HHHHHHHHhccccCcEEEEEe
Q 039591 198 --EKLGEYDCIFLAALVGM-----------SKEEK-----------MKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 198 --~~l~~fD~V~~~~~~~~-----------~~~~k-----------~~~l~~~~~~L~pGG~lv~~~ 240 (284)
...+..|+++.++.... ..++. ..+.+.+.+.|+++|.++..+
T Consensus 81 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 147 (266)
T 3oig_A 81 IKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLT 147 (266)
T ss_dssp HHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred HHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEe
Confidence 11257899998875421 11221 235677788899899888766
No 410
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=96.25 E-value=0.017 Score=51.02 Aligned_cols=91 Identities=10% Similarity=0.009 Sum_probs=61.1
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEE-cchhhhhccCCCccEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLT-GDILQVKEKLGEYDCIF 207 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~-~D~~~~~~~l~~fD~V~ 207 (284)
..+++|+.||+|.+|......++ ..|.+|+++|.+++..+.+++ +| +++.. .+..+ .+...|+|+
T Consensus 153 l~g~~v~IiG~G~iG~~~a~~l~--~~G~~V~~~dr~~~~~~~~~~----~g-----~~~~~~~~l~~---~l~~aDvVi 218 (293)
T 3d4o_A 153 IHGANVAVLGLGRVGMSVARKFA--ALGAKVKVGARESDLLARIAE----MG-----MEPFHISKAAQ---ELRDVDVCI 218 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHH--HTTCEEEEEESSHHHHHHHHH----TT-----SEEEEGGGHHH---HTTTCSEEE
T ss_pred CCCCEEEEEeeCHHHHHHHHHHH--hCCCEEEEEECCHHHHHHHHH----CC-----CeecChhhHHH---HhcCCCEEE
Confidence 57889999999999988777665 246799999999987654432 23 22222 22222 247899999
Q ss_pred EcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 208 LAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 208 ~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.+.+.++..+ ...+.|+||++++-..
T Consensus 219 ~~~p~~~i~~-------~~l~~mk~~~~lin~a 244 (293)
T 3d4o_A 219 NTIPALVVTA-------NVLAEMPSHTFVIDLA 244 (293)
T ss_dssp ECCSSCCBCH-------HHHHHSCTTCEEEECS
T ss_pred ECCChHHhCH-------HHHHhcCCCCEEEEec
Confidence 9876654311 2345789999877544
No 411
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=96.20 E-value=0.019 Score=54.47 Aligned_cols=105 Identities=19% Similarity=0.250 Sum_probs=69.7
Q ss_pred CCCCeEEEecCCCChHH-HHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhc--cCC---------CCCeEEEEcchhhh
Q 039591 129 VQPKKVAFVGSGPMPLT-SIVMAKNHLKATHFDNFDIDEAANNVARRIVATD--FEF---------EKRMKFLTGDILQV 196 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~-ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~--~~l---------~~~v~~~~~D~~~~ 196 (284)
....+|..||+|-+|+. +..|++ .|.+|+++|++++.++..++..... .++ ..++++ +.|..+.
T Consensus 6 ~~~~~I~VIG~G~vG~~lA~~la~---~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~-ttd~~~a 81 (478)
T 2y0c_A 6 HGSMNLTIIGSGSVGLVTGACLAD---IGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRF-STDIEAA 81 (478)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHH---TTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ECCHHHH
T ss_pred CCCceEEEECcCHHHHHHHHHHHh---CCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEE-ECCHHHH
Confidence 34579999999988875 445666 6789999999999988876531100 000 123444 3444322
Q ss_pred hccCCCccEEEEcCcCCC------CHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 197 KEKLGEYDCIFLAALVGM------SKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 197 ~~~l~~fD~V~~~~~~~~------~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+...|+||++..... +......+++.+.+.++||.+++..+
T Consensus 82 ---~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~S 128 (478)
T 2y0c_A 82 ---VAHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKS 128 (478)
T ss_dssp ---HHHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred ---hhcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 246899999864311 11456788899999999998887655
No 412
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=96.20 E-value=0.071 Score=47.70 Aligned_cols=106 Identities=15% Similarity=0.176 Sum_probs=63.7
Q ss_pred CCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHH-HHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 130 QPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNV-ARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~-A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.+.+|..||+|..|.+.............+..+|++++.++- +..+......+...+++..++. .++...|+|++
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~----~a~~~aDvVvi 80 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEY----SDCHDADLVVI 80 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCG----GGGTTCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCH----HHhCCCCEEEE
Confidence 457999999998888755433312223589999999976653 3433222221224556654332 24578999999
Q ss_pred cCcCCC----CHHH--------HHHHHHHHHhccccCcEEEEEe
Q 039591 209 AALVGM----SKEE--------KMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~~~----~~~~--------k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.+.... ...+ -.++.+.+.++ .|++++++.+
T Consensus 81 ~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~t 123 (317)
T 3d0o_A 81 CAGAAQKPGETRLDLVSKNLKIFKSIVGEVMAS-KFDGIFLVAT 123 (317)
T ss_dssp CCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEECS
T ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEec
Confidence 876532 2111 13444555555 8999998854
No 413
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=96.17 E-value=0.026 Score=48.99 Aligned_cols=88 Identities=11% Similarity=0.124 Sum_probs=60.5
Q ss_pred eEEEecCCCChHHHHH-HHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEEcCc
Q 039591 133 KVAFVGSGPMPLTSIV-MAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFLAAL 211 (284)
Q Consensus 133 ~VL~iGsGp~G~~ai~-la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~~~~ 211 (284)
+|..||+|.+|..-.. +++ .|.+|+++|.+++.++.+++. + ... . ...|..+. ...|+|+++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~---~g~~V~~~~~~~~~~~~~~~~----g-~~~--~-~~~~~~~~----~~~D~vi~av~ 66 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRR---RGHYLIGVSRQQSTCEKAVER----Q-LVD--E-AGQDLSLL----QTAKIIFLCTP 66 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHH---TTCEEEEECSCHHHHHHHHHT----T-SCS--E-EESCGGGG----TTCSEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHH---CCCEEEEEECCHHHHHHHHhC----C-CCc--c-ccCCHHHh----CCCCEEEEECC
Confidence 7999999977765433 333 467999999999988766432 3 111 2 23444332 57999999876
Q ss_pred CCCCHHHHHHHHHHHHhccccCcEEEEE
Q 039591 212 VGMSKEEKMKIIRHIRKYMKDGGILLVR 239 (284)
Q Consensus 212 ~~~~~~~k~~~l~~~~~~L~pGG~lv~~ 239 (284)
. .....+++.+.+.+++|.+++-.
T Consensus 67 ~----~~~~~~~~~l~~~~~~~~~vv~~ 90 (279)
T 2f1k_A 67 I----QLILPTLEKLIPHLSPTAIVTDV 90 (279)
T ss_dssp H----HHHHHHHHHHGGGSCTTCEEEEC
T ss_pred H----HHHHHHHHHHHhhCCCCCEEEEC
Confidence 4 45578888898899998877643
No 414
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=96.15 E-value=0.028 Score=49.94 Aligned_cols=98 Identities=19% Similarity=0.276 Sum_probs=65.8
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
...++|.+||+|.+|.. +...- . .|..|+.+|.+++.++.+.+.+.. . .-.++++ ..|..+ ....|+|+.
T Consensus 10 ~~~~~V~vIG~G~MG~~-iA~~l-a-aG~~V~v~d~~~~~~~~~~~~l~~-~-~~~~i~~-~~~~~~----~~~aDlVie 79 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRG-IAIAI-A-SKHEVVLQDVSEKALEAAREQIPE-E-LLSKIEF-TTTLEK----VKDCDIVME 79 (293)
T ss_dssp --CCEEEEECCSHHHHH-HHHHH-H-TTSEEEEECSCHHHHHHHHHHSCG-G-GGGGEEE-ESSCTT----GGGCSEEEE
T ss_pred cCCCeEEEEeeCHHHHH-HHHHH-H-cCCEEEEEECCHHHHHHHHHHHHH-H-HhCCeEE-eCCHHH----HcCCCEEEE
Confidence 34679999999977753 33222 3 578999999999999988876211 1 0124554 344432 357999999
Q ss_pred cCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 209 AALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+.+. ..+-|..++.++... ||.+++..+
T Consensus 80 avpe--~~~vk~~l~~~l~~~--~~~Ilasnt 107 (293)
T 1zej_A 80 AVFE--DLNTKVEVLREVERL--TNAPLCSNT 107 (293)
T ss_dssp CCCS--CHHHHHHHHHHHHTT--CCSCEEECC
T ss_pred cCcC--CHHHHHHHHHHHhcC--CCCEEEEEC
Confidence 8765 345578888887765 888887544
No 415
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=96.11 E-value=0.023 Score=50.28 Aligned_cols=91 Identities=10% Similarity=0.020 Sum_probs=61.5
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEE-cchhhhhccCCCccEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLT-GDILQVKEKLGEYDCIF 207 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~-~D~~~~~~~l~~fD~V~ 207 (284)
..+++|+.||+|.+|......++ ..|.+|+++|.+++..+.+.+ .+ ++... .+..+ .+...|+|+
T Consensus 155 l~g~~v~IiG~G~iG~~~a~~l~--~~G~~V~~~d~~~~~~~~~~~----~g-----~~~~~~~~l~~---~l~~aDvVi 220 (300)
T 2rir_A 155 IHGSQVAVLGLGRTGMTIARTFA--ALGANVKVGARSSAHLARITE----MG-----LVPFHTDELKE---HVKDIDICI 220 (300)
T ss_dssp STTSEEEEECCSHHHHHHHHHHH--HTTCEEEEEESSHHHHHHHHH----TT-----CEEEEGGGHHH---HSTTCSEEE
T ss_pred CCCCEEEEEcccHHHHHHHHHHH--HCCCEEEEEECCHHHHHHHHH----CC-----CeEEchhhHHH---HhhCCCEEE
Confidence 56889999999998988777665 256799999999976654432 23 22222 23322 246899999
Q ss_pred EcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 208 LAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 208 ~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.+.+.++.. +...+.|+||++++-..
T Consensus 221 ~~~p~~~i~-------~~~~~~mk~g~~lin~a 246 (300)
T 2rir_A 221 NTIPSMILN-------QTVLSSMTPKTLILDLA 246 (300)
T ss_dssp ECCSSCCBC-------HHHHTTSCTTCEEEECS
T ss_pred ECCChhhhC-------HHHHHhCCCCCEEEEEe
Confidence 987765431 12446899999877544
No 416
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=96.04 E-value=0.0052 Score=48.21 Aligned_cols=90 Identities=13% Similarity=0.103 Sum_probs=55.0
Q ss_pred CCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEEc
Q 039591 130 QPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFLA 209 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~~ 209 (284)
.+++|+.||+|++|........ ..|.+|+.+|.+++..+... +.++ ..+ ....+..+. +..+|+|+.+
T Consensus 20 ~~~~v~iiG~G~iG~~~a~~l~--~~g~~v~v~~r~~~~~~~~a---~~~~---~~~-~~~~~~~~~---~~~~Divi~a 87 (144)
T 3oj0_A 20 GGNKILLVGNGMLASEIAPYFS--YPQYKVTVAGRNIDHVRAFA---EKYE---YEY-VLINDIDSL---IKNNDVIITA 87 (144)
T ss_dssp CCCEEEEECCSHHHHHHGGGCC--TTTCEEEEEESCHHHHHHHH---HHHT---CEE-EECSCHHHH---HHTCSEEEEC
T ss_pred cCCEEEEECCCHHHHHHHHHHH--hCCCEEEEEcCCHHHHHHHH---HHhC---Cce-EeecCHHHH---hcCCCEEEEe
Confidence 4889999999977765443333 25677999999998765422 2222 111 122343332 2579999998
Q ss_pred CcCCCCHHHHHHHHHHHHhccccCcEEEEE
Q 039591 210 ALVGMSKEEKMKIIRHIRKYMKDGGILLVR 239 (284)
Q Consensus 210 ~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~ 239 (284)
...... ++. .+.+++|+.++-.
T Consensus 88 t~~~~~------~~~--~~~l~~g~~vid~ 109 (144)
T 3oj0_A 88 TSSKTP------IVE--ERSLMPGKLFIDL 109 (144)
T ss_dssp SCCSSC------SBC--GGGCCTTCEEEEC
T ss_pred CCCCCc------Eee--HHHcCCCCEEEEc
Confidence 765422 111 2678888877643
No 417
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=95.99 E-value=0.12 Score=44.81 Aligned_cols=104 Identities=15% Similarity=0.162 Sum_probs=71.2
Q ss_pred CCCeEEEecCCCChHHH---HHHHhhcCCCcEEEEEeCC------------HHHHHHHHHHHhhccCCCCCeEEEEcchh
Q 039591 130 QPKKVAFVGSGPMPLTS---IVMAKNHLKATHFDNFDID------------EAANNVARRIVATDFEFEKRMKFLTGDIL 194 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~a---i~la~~~~~~~~V~~vDis------------~~~~~~A~~~~~~~~~l~~~v~~~~~D~~ 194 (284)
.+++||..|++ .|+-. ..|++ .|++|+.+|.+ .+.++.+...+...+ .++.++..|+.
T Consensus 9 ~gk~vlVTGas-~gIG~~ia~~l~~---~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~ 81 (287)
T 3pxx_A 9 QDKVVLVTGGA-RGQGRSHAVKLAE---EGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG---RKAYTAEVDVR 81 (287)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH---TTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT---SCEEEEECCTT
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHH---CCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC---CceEEEEccCC
Confidence 56789999997 66543 23444 68999999988 777766666555533 67899999987
Q ss_pred hhh----------ccCCCccEEEEcCcCCC-----CHHHH-----------HHHHHHHHhccccCcEEEEEe
Q 039591 195 QVK----------EKLGEYDCIFLAALVGM-----SKEEK-----------MKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 195 ~~~----------~~l~~fD~V~~~~~~~~-----~~~~k-----------~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+.. ...++.|+++.++.... ..++. ..+.+.+.+.|+++|.++..+
T Consensus 82 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 153 (287)
T 3pxx_A 82 DRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTG 153 (287)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEec
Confidence 632 11258999998876521 12221 345567788888889888766
No 418
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=95.99 E-value=0.055 Score=48.09 Aligned_cols=101 Identities=21% Similarity=0.255 Sum_probs=59.9
Q ss_pred CeEEEecCCCChHHHHHHHhhcCCCc--EEEEEeCCHHHHHH-HHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 132 KKVAFVGSGPMPLTSIVMAKNHLKAT--HFDNFDIDEAANNV-ARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 132 ~~VL~iGsGp~G~~ai~la~~~~~~~--~V~~vDis~~~~~~-A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.+|..||+|..|.+...... ..+. +|+.+|+++++++. +........ ....+++...|. ..+...|+|++
T Consensus 1 mkI~VIGaG~vG~~la~~la--~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~-~~~~~~i~~~~~----~a~~~aDvVIi 73 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALV--LRGSCSELVLVDRDEDRAQAEAEDIAHAAP-VSHGTRVWHGGH----SELADAQVVIL 73 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHH--HTTCCSEEEEECSSHHHHHHHHHHHTTSCC-TTSCCEEEEECG----GGGTTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHH--hCCCCCEEEEEeCCHHHHHHHHHhhhhhhh-hcCCeEEEECCH----HHhCCCCEEEE
Confidence 37999999988876554333 1344 89999999987653 333222111 112344443342 24578999999
Q ss_pred cCcCCCC------------HHHHHHHHHHHHhccccCcEEEEEe
Q 039591 209 AALVGMS------------KEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~~~~------------~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+...... .+-+.++++.+.++ .|++.+++.+
T Consensus 74 ~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~~t 116 (304)
T 2v6b_A 74 TAGANQKPGESRLDLLEKNADIFRELVPQITRA-APDAVLLVTS 116 (304)
T ss_dssp CC------------CHHHHHHHHHHHHHHHHHH-CSSSEEEECS
T ss_pred cCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHh-CCCeEEEEec
Confidence 8754211 11236677777776 6999887633
No 419
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.95 E-value=0.029 Score=41.48 Aligned_cols=72 Identities=21% Similarity=0.168 Sum_probs=49.9
Q ss_pred CCCeEEEecCCCChHHHHHHHhhcCCC-cEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhh---hccCCCccE
Q 039591 130 QPKKVAFVGSGPMPLTSIVMAKNHLKA-THFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQV---KEKLGEYDC 205 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~ai~la~~~~~~-~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~---~~~l~~fD~ 205 (284)
..++|+.+|+|.+|........ ..| .+|+++|.+++..+..+ . ..+.++..|..+. ...+..+|+
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~--~~g~~~v~~~~r~~~~~~~~~----~-----~~~~~~~~d~~~~~~~~~~~~~~d~ 72 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLK--TSSNYSVTVADHDLAALAVLN----R-----MGVATKQVDAKDEAGLAKALGGFDA 72 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHH--HCSSEEEEEEESCHHHHHHHH----T-----TTCEEEECCTTCHHHHHHHTTTCSE
T ss_pred CcCeEEEECCCHHHHHHHHHHH--hCCCceEEEEeCCHHHHHHHH----h-----CCCcEEEecCCCHHHHHHHHcCCCE
Confidence 3468999999988876554433 145 78999999998876654 1 2356677776542 122368999
Q ss_pred EEEcCcC
Q 039591 206 IFLAALV 212 (284)
Q Consensus 206 V~~~~~~ 212 (284)
|+.+.+.
T Consensus 73 vi~~~~~ 79 (118)
T 3ic5_A 73 VISAAPF 79 (118)
T ss_dssp EEECSCG
T ss_pred EEECCCc
Confidence 9998754
No 420
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=95.94 E-value=0.032 Score=53.01 Aligned_cols=105 Identities=19% Similarity=0.279 Sum_probs=68.5
Q ss_pred CCCCeEEEecCCCChHHH-HHHHhhcCCCc-EEEEEeCCHH----HHHHHHHHHhhc----cCC---------CCCeEEE
Q 039591 129 VQPKKVAFVGSGPMPLTS-IVMAKNHLKAT-HFDNFDIDEA----ANNVARRIVATD----FEF---------EKRMKFL 189 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~a-i~la~~~~~~~-~V~~vDis~~----~~~~A~~~~~~~----~~l---------~~~v~~~ 189 (284)
.+-.+|..||+|-+|... ..|++ .+|. +|+++|++++ .++..++..... .++ ..++.+
T Consensus 16 ~~~mkIaVIGlG~mG~~lA~~la~--~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~- 92 (478)
T 3g79_A 16 GPIKKIGVLGMGYVGIPAAVLFAD--APCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFEC- 92 (478)
T ss_dssp CSCCEEEEECCSTTHHHHHHHHHH--STTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEE-
T ss_pred CCCCEEEEECcCHHHHHHHHHHHH--hCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEE-
Confidence 345799999999999764 45665 2378 9999999999 776654411000 000 234554
Q ss_pred EcchhhhhccCCCccEEEEcCcCCC--------CHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 190 TGDILQVKEKLGEYDCIFLAALVGM--------SKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 190 ~~D~~~~~~~l~~fD~V~~~~~~~~--------~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+.| .+ .+...|+||++.+... +...-....+.+.+.|++|.+++..+
T Consensus 93 ttd-~e---a~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~S 147 (478)
T 3g79_A 93 TPD-FS---RISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLES 147 (478)
T ss_dssp ESC-GG---GGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECS
T ss_pred eCc-HH---HHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence 344 22 2356899999865432 11334667788999999999888765
No 421
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=95.92 E-value=0.12 Score=46.08 Aligned_cols=103 Identities=20% Similarity=0.202 Sum_probs=64.6
Q ss_pred CeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHH-HHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEEcC
Q 039591 132 KKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNV-ARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFLAA 210 (284)
Q Consensus 132 ~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~-A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~~~ 210 (284)
.+|..+|+|..|.+...+........++..+|+++++++- +..+..... +...+++..+|. .++...|+|++.+
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~-~~~~~~v~~~~~----~a~~~aD~Vii~a 75 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATP-FAHPVWVWAGSY----GDLEGARAVVLAA 75 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGG-GSCCCEEEECCG----GGGTTEEEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHh-hcCCeEEEECCH----HHhCCCCEEEECC
Confidence 4799999998888766544322234689999999987763 555543322 124566665442 3457899999987
Q ss_pred cCC----CCHHH--------HHHHHHHHHhccccCcEEEEEe
Q 039591 211 LVG----MSKEE--------KMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 211 ~~~----~~~~~--------k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
... +...+ -.++.+.+.++ .|.|.+++.+
T Consensus 76 g~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~t 116 (310)
T 2xxj_A 76 GVAQRPGETRLQLLDRNAQVFAQVVPRVLEA-APEAVLLVAT 116 (310)
T ss_dssp CCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECS
T ss_pred CCCCCCCcCHHHHHHhhHHHHHHHHHHHHHH-CCCcEEEEec
Confidence 653 22222 13344444444 7999988854
No 422
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=95.92 E-value=0.11 Score=46.57 Aligned_cols=105 Identities=18% Similarity=0.207 Sum_probs=63.8
Q ss_pred CCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHH-HHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 130 QPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNV-ARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~-A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
+..+|..+|+|..|.+...+........++..+|++++.++- +..+..... +...+++..++. .++...|+|++
T Consensus 4 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~-~~~~~~v~~~~~----~a~~~aDvVii 78 (318)
T 1ez4_A 4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQA-FTAPKKIYSGEY----SDCKDADLVVI 78 (318)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGG-GSCCCEEEECCG----GGGTTCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHH-hcCCeEEEECCH----HHhCCCCEEEE
Confidence 346999999998888765544312223489999999987773 555543322 224566654432 34578999999
Q ss_pred cCcCCCCH------------HHHHHHHHHHHhccccCcEEEEEe
Q 039591 209 AALVGMSK------------EEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~~~~~------------~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.+.....+ +--.++.+.+.++ .|+|.+++.+
T Consensus 79 ~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~t 121 (318)
T 1ez4_A 79 TAGAPQKPGESRLDLVNKNLNILSSIVKPVVDS-GFDGIFLVAA 121 (318)
T ss_dssp CCCC----------CHHHHHHHHHHHHHHHHHT-TCCSEEEECS
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEeC
Confidence 87653211 0112333444444 7999988854
No 423
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=95.92 E-value=0.019 Score=53.90 Aligned_cols=89 Identities=15% Similarity=0.020 Sum_probs=61.7
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
..+++|+.+|.|++|......++ ..|.+|+++|++|.....|.. .| +++ .++.+. +...|+|+.
T Consensus 245 L~GKTVgVIG~G~IGr~vA~~lr--afGa~Viv~d~dp~~a~~A~~----~G-----~~v--v~LeEl---L~~ADIVv~ 308 (464)
T 3n58_A 245 MAGKVAVVCGYGDVGKGSAQSLA--GAGARVKVTEVDPICALQAAM----DG-----FEV--VTLDDA---ASTADIVVT 308 (464)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHH--HTTCEEEEECSSHHHHHHHHH----TT-----CEE--CCHHHH---GGGCSEEEE
T ss_pred ccCCEEEEECcCHHHHHHHHHHH--HCCCEEEEEeCCcchhhHHHh----cC-----cee--ccHHHH---HhhCCEEEE
Confidence 67899999999999998888877 357899999999976544432 12 232 244332 257899998
Q ss_pred cCcCCCCHHHHHHHH-HHHHhccccCcEEEEEe
Q 039591 209 AALVGMSKEEKMKII-RHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~~~~~~~k~~~l-~~~~~~L~pGG~lv~~~ 240 (284)
+... ..++ ++..+.||||++|+-.+
T Consensus 309 atgt-------~~lI~~e~l~~MK~GAILINvG 334 (464)
T 3n58_A 309 TTGN-------KDVITIDHMRKMKDMCIVGNIG 334 (464)
T ss_dssp CCSS-------SSSBCHHHHHHSCTTEEEEECS
T ss_pred CCCC-------ccccCHHHHhcCCCCeEEEEcC
Confidence 6532 1122 45667899999887543
No 424
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=95.90 E-value=0.033 Score=52.20 Aligned_cols=100 Identities=16% Similarity=0.263 Sum_probs=67.0
Q ss_pred CCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHH------------hhccCCCCCeEEEEcchhhhh
Q 039591 130 QPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIV------------ATDFEFEKRMKFLTGDILQVK 197 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~------------~~~~~l~~~v~~~~~D~~~~~ 197 (284)
.-.+|..||+|-+|........ .|.+|+++|++++.++..++.. .. + ..++++ +.|..+.
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La---~G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~-~--~~~l~~-ttd~~ea- 106 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIA---QNHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAE-K--PLNFRA-TTDKHDA- 106 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHH---TTSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHH-S--CCCEEE-ESCHHHH-
T ss_pred CCCEEEEECcCHHHHHHHHHHH---cCCeEEEEecCHHHhhHHhccCCccccccHHHHHhh-c--cCCeEE-EcCHHHH-
Confidence 3468999999988876544433 2789999999999998776521 11 0 124544 3454332
Q ss_pred ccCCCccEEEEcCcCCCCH-------HHHHHHHHHHHhccccCcEEEEEe
Q 039591 198 EKLGEYDCIFLAALVGMSK-------EEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 198 ~~l~~fD~V~~~~~~~~~~-------~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+...|+||++.+..... ..-..+++.+.+ |+||.+++..+
T Consensus 107 --~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~S 153 (432)
T 3pid_A 107 --YRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKS 153 (432)
T ss_dssp --HTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECS
T ss_pred --HhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeC
Confidence 25789999986542110 234677788888 99999988766
No 425
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=95.89 E-value=0.06 Score=49.04 Aligned_cols=97 Identities=12% Similarity=0.142 Sum_probs=65.8
Q ss_pred CCeEEEecCCCChHHH-HHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhh---ccC--CCCCeEEEEcchhhhhccCCCcc
Q 039591 131 PKKVAFVGSGPMPLTS-IVMAKNHLKATHFDNFDIDEAANNVARRIVAT---DFE--FEKRMKFLTGDILQVKEKLGEYD 204 (284)
Q Consensus 131 ~~~VL~iGsGp~G~~a-i~la~~~~~~~~V~~vDis~~~~~~A~~~~~~---~~~--l~~~v~~~~~D~~~~~~~l~~fD 204 (284)
..+|..||+|..|... ..|++ .|..|+.+|.+++.++..++.-.. +++ +..++.+ ..|..+. +...|
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~---~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~-t~d~~ea---~~~aD 101 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLAR---KGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKA-YCDLKAS---LEGVT 101 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHT---TTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEE-ESCHHHH---HTTCC
T ss_pred CCeEEEECccHHHHHHHHHHHH---CCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEE-ECCHHHH---HhcCC
Confidence 4689999999777643 33444 577899999999988776654211 111 1223444 3454432 25799
Q ss_pred EEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEE
Q 039591 205 CIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLV 238 (284)
Q Consensus 205 ~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~ 238 (284)
+|+++... ....++++++...++|+..++.
T Consensus 102 vVilaVp~----~~~~~vl~~i~~~l~~~~ivvs 131 (356)
T 3k96_A 102 DILIVVPS----FAFHEVITRMKPLIDAKTRIAW 131 (356)
T ss_dssp EEEECCCH----HHHHHHHHHHGGGCCTTCEEEE
T ss_pred EEEECCCH----HHHHHHHHHHHHhcCCCCEEEE
Confidence 99998653 4568889999999999887654
No 426
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=95.85 E-value=0.13 Score=46.30 Aligned_cols=106 Identities=16% Similarity=0.143 Sum_probs=63.7
Q ss_pred CCCCeEEEecCCCChHHHHH-HHhhcCCCcEEEEEeCCHHHHHH-HHHHHhhccCCCCCeEEEEcchhhhhccCCCccEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIV-MAKNHLKATHFDNFDIDEAANNV-ARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCI 206 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~-la~~~~~~~~V~~vDis~~~~~~-A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V 206 (284)
+.+.+|..||+|..|.+... ++. .....+++.+|++++.++- +..+....+.+...+++..+|.. .+...|+|
T Consensus 3 ~~~~kI~ViGaG~vG~~~a~~l~~-~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~----a~~~aDvV 77 (326)
T 3pqe_A 3 KHVNKVALIGAGFVGSSYAFALIN-QGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYE----DCKDADIV 77 (326)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHH-HTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGG----GGTTCSEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh-CCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHH----HhCCCCEE
Confidence 35679999999988887654 343 1122489999999987654 33333222212235666655542 34689999
Q ss_pred EEcCcC----CCCHHHH--------HHHHHHHHhccccCcEEEEEe
Q 039591 207 FLAALV----GMSKEEK--------MKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 207 ~~~~~~----~~~~~~k--------~~~l~~~~~~L~pGG~lv~~~ 240 (284)
++.+.. ++...+. ..+.+.+.+ ..|++++++.+
T Consensus 78 vi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~-~~p~a~vlvvt 122 (326)
T 3pqe_A 78 CICAGANQKPGETRLELVEKNLKIFKGIVSEVMA-SGFDGIFLVAT 122 (326)
T ss_dssp EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHH-TTCCSEEEECS
T ss_pred EEecccCCCCCccHHHHHHHHHHHHHHHHHHHHH-hcCCeEEEEcC
Confidence 998754 3332221 233344444 36888887755
No 427
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=95.83 E-value=0.025 Score=51.63 Aligned_cols=93 Identities=13% Similarity=0.151 Sum_probs=64.3
Q ss_pred CCeEEEecCCCChHHH-HHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEEc
Q 039591 131 PKKVAFVGSGPMPLTS-IVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFLA 209 (284)
Q Consensus 131 ~~~VL~iGsGp~G~~a-i~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~~ 209 (284)
..+|.+||+|-+|..- ..|++ .|.+|+++|.+++.++.+.+. + +. ...+..+........|+||++
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~---~G~~V~v~dr~~~~~~~l~~~----g-----~~-~~~s~~e~~~~a~~~DvVi~~ 88 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRK---GGHECVVYDLNVNAVQALERE----G-----IA-GARSIEEFCAKLVKPRVVWLM 88 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH---TTCEEEEECSCHHHHHHHHTT----T-----CB-CCSSHHHHHHHSCSSCEEEEC
T ss_pred CCEEEEECchHHHHHHHHHHHh---CCCEEEEEeCCHHHHHHHHHC----C-----CE-EeCCHHHHHhcCCCCCEEEEe
Confidence 4699999999888653 33444 578999999999887765432 2 11 134555444333567999998
Q ss_pred CcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 210 ALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 210 ~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.... ....+++.+...+++|.+++-.+
T Consensus 89 vp~~----~v~~vl~~l~~~l~~g~iiId~s 115 (358)
T 4e21_A 89 VPAA----VVDSMLQRMTPLLAANDIVIDGG 115 (358)
T ss_dssp SCGG----GHHHHHHHHGGGCCTTCEEEECS
T ss_pred CCHH----HHHHHHHHHHhhCCCCCEEEeCC
Confidence 7653 34678889999999988777544
No 428
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=95.82 E-value=0.081 Score=52.92 Aligned_cols=100 Identities=16% Similarity=0.232 Sum_probs=71.4
Q ss_pred CeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhc-------c---C---CCCCeEEEEcchhhhhc
Q 039591 132 KKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATD-------F---E---FEKRMKFLTGDILQVKE 198 (284)
Q Consensus 132 ~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~-------~---~---l~~~v~~~~~D~~~~~~ 198 (284)
++|..||+|.+|-.-...+. ..|..|+.+|++++.++.+++.+... + . ...++++ ..|. .
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a--~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~----~ 389 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFA--RVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSST----K 389 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHH--TTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEE-ESCG----G
T ss_pred cEEEEEcccHHHHHHHHHHH--hCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcc-cCcH----H
Confidence 59999999977754333332 47899999999999999888765421 0 0 1122332 2332 2
Q ss_pred cCCCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 199 KLGEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 199 ~l~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
++...|+|+.+..- ..+-|.++|+++-++++|+.+|.-.+
T Consensus 390 ~l~~aDlVIEAV~E--~l~iK~~vf~~le~~~~~~aIlASNT 429 (742)
T 3zwc_A 390 ELSTVDLVVEAVFE--DMNLKKKVFAELSALCKPGAFLCTNT 429 (742)
T ss_dssp GGGSCSEEEECCCS--CHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred HHhhCCEEEEeccc--cHHHHHHHHHHHhhcCCCCceEEecC
Confidence 34679999998653 46789999999999999999988765
No 429
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=95.81 E-value=0.046 Score=48.79 Aligned_cols=97 Identities=10% Similarity=0.061 Sum_probs=61.4
Q ss_pred CCCeEEEecCCCChHH-HHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCC----CCeEEEEcchhhhhccCCCcc
Q 039591 130 QPKKVAFVGSGPMPLT-SIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFE----KRMKFLTGDILQVKEKLGEYD 204 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~-ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~----~~v~~~~~D~~~~~~~l~~fD 204 (284)
...+|+.||+|.+|.. +..|++ .|..|+.+ .+++.++..++.-....... .++.+ ..|.. ..+.+|
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~---~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~-~~~~~----~~~~~D 88 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLAR---AGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSA-SSDPS----AVQGAD 88 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHH---TTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEE-ESCGG----GGTTCS
T ss_pred cCCcEEEECcCHHHHHHHHHHHH---CCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeee-eCCHH----HcCCCC
Confidence 4579999999988854 334554 57799999 99988877765411110000 11111 12222 236899
Q ss_pred EEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEE
Q 039591 205 CIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVR 239 (284)
Q Consensus 205 ~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~ 239 (284)
+|+++.... +-.++++.+...++|+..++.-
T Consensus 89 ~vilavk~~----~~~~~l~~l~~~l~~~~~iv~~ 119 (318)
T 3hwr_A 89 LVLFCVKST----DTQSAALAMKPALAKSALVLSL 119 (318)
T ss_dssp EEEECCCGG----GHHHHHHHHTTTSCTTCEEEEE
T ss_pred EEEEEcccc----cHHHHHHHHHHhcCCCCEEEEe
Confidence 999987542 3478889999999999876643
No 430
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=95.81 E-value=0.041 Score=52.36 Aligned_cols=98 Identities=14% Similarity=0.126 Sum_probs=67.3
Q ss_pred CeEEEecCCCChHHH-HHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEEcC
Q 039591 132 KKVAFVGSGPMPLTS-IVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFLAA 210 (284)
Q Consensus 132 ~~VL~iGsGp~G~~a-i~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~~~ 210 (284)
.+|.+||.|-+|..- ..|++ .|.+|+++|.+++.++...+.... + .++.. ..+..+....+...|+|+++.
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~---~G~~V~v~dr~~~~~~~l~~~g~~-g---~~i~~-~~s~~e~v~~l~~aDvVil~V 76 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMND---HGFVVCAFNRTVSKVDDFLANEAK-G---TKVVG-AQSLKEMVSKLKKPRRIILLV 76 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHH---TTCCEEEECSSTHHHHHHHHTTTT-T---SSCEE-CSSHHHHHHTBCSSCEEEECS
T ss_pred CEEEEEChhHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHhcccC-C---Cceec-cCCHHHHHhhccCCCEEEEec
Confidence 579999999888653 33554 578999999999988776553111 1 23332 355555554456799999987
Q ss_pred cCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 211 LVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 211 ~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
..+ ..-..+++.+...|+||.+++-.+
T Consensus 77 p~~---~~v~~vl~~l~~~L~~g~iIId~s 103 (484)
T 4gwg_A 77 KAG---QAVDDFIEKLVPLLDTGDIIIDGG 103 (484)
T ss_dssp CSS---HHHHHHHHHHGGGCCTTCEEEECS
T ss_pred CCh---HHHHHHHHHHHHhcCCCCEEEEcC
Confidence 653 334568899999999988776543
No 431
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=95.80 E-value=0.11 Score=46.65 Aligned_cols=107 Identities=19% Similarity=0.180 Sum_probs=64.3
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHH-HHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNV-ARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIF 207 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~-A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~ 207 (284)
++..+|..+|+|..|.+...+........++..+|++++.++- +..+..... +...+++..++. .++...|+|+
T Consensus 7 ~~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~-~~~~~~i~~~~~----~a~~~aDvVi 81 (326)
T 2zqz_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALP-FTSPKKIYSAEY----SDAKDADLVV 81 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGG-GSCCCEEEECCG----GGGGGCSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHH-hcCCeEEEECCH----HHhCCCCEEE
Confidence 5567999999998888765543312223489999999987754 444433322 224566665432 2356899999
Q ss_pred EcCcCCCC----HHHH----HHHHHHHHhcc---ccCcEEEEEe
Q 039591 208 LAALVGMS----KEEK----MKIIRHIRKYM---KDGGILLVRS 240 (284)
Q Consensus 208 ~~~~~~~~----~~~k----~~~l~~~~~~L---~pGG~lv~~~ 240 (284)
+.+..... ..+. ..+++.+.+.+ .|.|++++.+
T Consensus 82 i~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t 125 (326)
T 2zqz_A 82 ITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA 125 (326)
T ss_dssp ECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence 98765321 1111 13344443322 7999988854
No 432
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=95.80 E-value=0.028 Score=49.75 Aligned_cols=92 Identities=15% Similarity=0.140 Sum_probs=61.1
Q ss_pred CCeEEEecCCCChHHHH-HHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEEc
Q 039591 131 PKKVAFVGSGPMPLTSI-VMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFLA 209 (284)
Q Consensus 131 ~~~VL~iGsGp~G~~ai-~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~~ 209 (284)
..+|.+||+|-+|..-. .|++ .|.+|+++|.+++.++...+. | .. ....+..+. ....|+|+++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~---~G~~V~~~dr~~~~~~~~~~~----g---~~--~~~~~~~e~---~~~aDvvi~~ 71 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLR---AGLSTWGADLNPQACANLLAE----G---AC--GAAASAREF---AGVVDALVIL 71 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH---TTCEEEEECSCHHHHHHHHHT----T---CS--EEESSSTTT---TTTCSEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHH---CCCeEEEEECCHHHHHHHHHc----C---Cc--cccCCHHHH---HhcCCEEEEE
Confidence 46899999998886533 3444 578999999999988776543 3 11 123443332 2578999998
Q ss_pred CcCCCCHHHHHHHH---HHHHhccccCcEEEEEe
Q 039591 210 ALVGMSKEEKMKII---RHIRKYMKDGGILLVRS 240 (284)
Q Consensus 210 ~~~~~~~~~k~~~l---~~~~~~L~pGG~lv~~~ 240 (284)
... ...-..++ +.+.+.++||.+++..+
T Consensus 72 vp~---~~~~~~v~~~~~~l~~~l~~g~ivv~~s 102 (303)
T 3g0o_A 72 VVN---AAQVRQVLFGEDGVAHLMKPGSAVMVSS 102 (303)
T ss_dssp CSS---HHHHHHHHC--CCCGGGSCTTCEEEECS
T ss_pred CCC---HHHHHHHHhChhhHHhhCCCCCEEEecC
Confidence 764 12334454 66678899988887554
No 433
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=95.80 E-value=0.05 Score=50.84 Aligned_cols=102 Identities=13% Similarity=0.126 Sum_probs=64.4
Q ss_pred CeEEEecCCCChHHH-HHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhc--cCC---------CCCeEEEEcchhhhhcc
Q 039591 132 KKVAFVGSGPMPLTS-IVMAKNHLKATHFDNFDIDEAANNVARRIVATD--FEF---------EKRMKFLTGDILQVKEK 199 (284)
Q Consensus 132 ~~VL~iGsGp~G~~a-i~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~--~~l---------~~~v~~~~~D~~~~~~~ 199 (284)
.+|..||+|-+|... ..|++ .|.+|+++|++++.++..++..... .++ ..++.+ ..|..+.
T Consensus 1 mkI~VIG~G~vG~~~A~~la~---~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~-t~~~~~~--- 73 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSA---RGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSG-TTDFKKA--- 73 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHH---TTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE-ESCHHHH---
T ss_pred CEEEEECCCHHHHHHHHHHHH---CCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEE-eCCHHHH---
Confidence 379999999999864 34565 5789999999999988765420000 000 123444 3444332
Q ss_pred CCCccEEEEcCcCCCC------HHHHHHHHHHHHhcccc---CcEEEEEe
Q 039591 200 LGEYDCIFLAALVGMS------KEEKMKIIRHIRKYMKD---GGILLVRS 240 (284)
Q Consensus 200 l~~fD~V~~~~~~~~~------~~~k~~~l~~~~~~L~p---GG~lv~~~ 240 (284)
+...|+||++...... ...-..+++.+.+.+++ |.+++..+
T Consensus 74 ~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~S 123 (436)
T 1mv8_A 74 VLDSDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRS 123 (436)
T ss_dssp HHTCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECS
T ss_pred hccCCEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeC
Confidence 2468999998654211 01135678888899999 77776554
No 434
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=95.79 E-value=0.093 Score=44.69 Aligned_cols=107 Identities=11% Similarity=0.097 Sum_probs=69.9
Q ss_pred CCCeEEEecCCCChHHHHHHHhhc-C-CCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhc---------
Q 039591 130 QPKKVAFVGSGPMPLTSIVMAKNH-L-KATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKE--------- 198 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~ai~la~~~-~-~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~--------- 198 (284)
.+++||..|++ .|+- ..+++.. . .|.+|+.++.+++..+...+.+...+ .++.++.+|+.+...
T Consensus 3 ~~k~vlITGas-ggIG-~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~ 77 (276)
T 1wma_A 3 GIHVALVTGGN-KGIG-LAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG---LSPRFHQLDIDDLQSIRALRDFLR 77 (276)
T ss_dssp CCCEEEESSCS-SHHH-HHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT---CCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHH-HHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC---CeeEEEECCCCCHHHHHHHHHHHH
Confidence 45789999877 5553 3444422 2 57899999999887776665554423 578899999876321
Q ss_pred -cCCCccEEEEcCcCCCC-------HHHH-----------HHHHHHHHhccccCcEEEEEec
Q 039591 199 -KLGEYDCIFLAALVGMS-------KEEK-----------MKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 199 -~l~~fD~V~~~~~~~~~-------~~~k-----------~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
..+++|+||.++..... .++. ..+++.+.+.|+++|+++..+.
T Consensus 78 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS 139 (276)
T 1wma_A 78 KEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSS 139 (276)
T ss_dssp HHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred HhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECC
Confidence 11479999988754211 1221 3456667778888888887763
No 435
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=95.79 E-value=0.027 Score=53.03 Aligned_cols=104 Identities=16% Similarity=0.239 Sum_probs=69.1
Q ss_pred CCCeEEEecCCCChHH-HHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhh--ccC---------CCCCeEEEEcchhhhh
Q 039591 130 QPKKVAFVGSGPMPLT-SIVMAKNHLKATHFDNFDIDEAANNVARRIVAT--DFE---------FEKRMKFLTGDILQVK 197 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~-ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~--~~~---------l~~~v~~~~~D~~~~~ 197 (284)
..-+|.+||+|-.|+. +..|++ .|.+|+++|++++.++..++.... ..+ ...++++ +.|..+.
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~---~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~-ttd~~ea- 81 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSD---FGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSF-TTDLAEG- 81 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH---TTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEE-ESCHHHH-
T ss_pred CceEEEEEcCCHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEE-ECCHHHH-
Confidence 3458999999988876 445666 688999999999988776542100 000 0134554 4555432
Q ss_pred ccCCCccEEEEcCcCCCC-------HHHHHHHHHHHHhccccCcEEEEEe
Q 039591 198 EKLGEYDCIFLAALVGMS-------KEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 198 ~~l~~fD~V~~~~~~~~~-------~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
....|+||++-+.... ......+++.+.+.|++|.+++..+
T Consensus 82 --~~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~S 129 (446)
T 4a7p_A 82 --VKDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKS 129 (446)
T ss_dssp --HTTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECS
T ss_pred --HhcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 2578999998543211 0135778889999999999988876
No 436
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=95.79 E-value=0.055 Score=50.66 Aligned_cols=101 Identities=19% Similarity=0.221 Sum_probs=66.4
Q ss_pred CCCCeEEEecCCCChHHH-HHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhc--cC---------CCCCeEEEEcchhhh
Q 039591 129 VQPKKVAFVGSGPMPLTS-IVMAKNHLKATHFDNFDIDEAANNVARRIVATD--FE---------FEKRMKFLTGDILQV 196 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~a-i~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~--~~---------l~~~v~~~~~D~~~~ 196 (284)
..+.+.-.||.|-.|+.. ..|++ .|.+|+++|+|++.++..++..... .+ ...++.+. .|
T Consensus 9 ~~~~~~~ViGlGyvGlp~A~~La~---~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~t-td---- 80 (431)
T 3ojo_A 9 HHGSKLTVVGLGYIGLPTSIMFAK---HGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVS-TT---- 80 (431)
T ss_dssp ---CEEEEECCSTTHHHHHHHHHH---TTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEE-SS----
T ss_pred ccCCccEEEeeCHHHHHHHHHHHH---CCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEe-Cc----
Confidence 467899999999999874 45666 6889999999999998876521000 00 01234442 23
Q ss_pred hccCCCccEEEEcCcCCCC--------HHHHHHHHHHHHhccccCcEEEEEe
Q 039591 197 KEKLGEYDCIFLAALVGMS--------KEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 197 ~~~l~~fD~V~~~~~~~~~--------~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
....|+||++-+.... ...-....+.+.+.|++|.+++..+
T Consensus 81 ---~~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~S 129 (431)
T 3ojo_A 81 ---PEASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVES 129 (431)
T ss_dssp ---CCCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECS
T ss_pred ---hhhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEec
Confidence 2468999998554221 1234566788999999999888766
No 437
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=95.78 E-value=0.047 Score=47.70 Aligned_cols=91 Identities=14% Similarity=0.197 Sum_probs=60.5
Q ss_pred CeEEEecCCCChHHHHH-HHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEEcC
Q 039591 132 KKVAFVGSGPMPLTSIV-MAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFLAA 210 (284)
Q Consensus 132 ~~VL~iGsGp~G~~ai~-la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~~~ 210 (284)
.+|.+||+|-+|..-.. +++ ...+.+|+++|.+++.++.+++. | ... ....|..+. ....|+|+++.
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~-~g~~~~V~~~d~~~~~~~~~~~~----g-~~~---~~~~~~~~~---~~~aDvVilav 74 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKR-DHPHYKIVGYNRSDRSRDIALER----G-IVD---EATADFKVF---AALADVIILAV 74 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-HCTTSEEEEECSSHHHHHHHHHT----T-SCS---EEESCTTTT---GGGCSEEEECS
T ss_pred ceEEEEeeCHHHHHHHHHHHh-CCCCcEEEEEcCCHHHHHHHHHc----C-Ccc---cccCCHHHh---hcCCCEEEEcC
Confidence 58999999977765433 443 22367899999999988766542 3 111 123343321 25689999987
Q ss_pred cCCCCHHHHHHHHHHHHhc-cccCcEEEE
Q 039591 211 LVGMSKEEKMKIIRHIRKY-MKDGGILLV 238 (284)
Q Consensus 211 ~~~~~~~~k~~~l~~~~~~-L~pGG~lv~ 238 (284)
.. ..-..+++.+.+. +++|.+++.
T Consensus 75 p~----~~~~~v~~~l~~~~l~~~~ivi~ 99 (290)
T 3b1f_A 75 PI----KKTIDFIKILADLDLKEDVIITD 99 (290)
T ss_dssp CH----HHHHHHHHHHHTSCCCTTCEEEC
T ss_pred CH----HHHHHHHHHHHhcCCCCCCEEEE
Confidence 64 3336788888888 998887764
No 438
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=95.77 E-value=0.036 Score=49.68 Aligned_cols=105 Identities=22% Similarity=0.264 Sum_probs=60.7
Q ss_pred CCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHH-HHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 130 QPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNV-ARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~-A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
.+.+|..||+|..|.+............+++.+|++++.++- +..+..... +...+++..+| ..++...|+|++
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~-~~~~~~i~~~~----~~a~~~aDvVii 80 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLP-FMGQMSLYAGD----YSDVKDCDVIVV 80 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCC-CTTCEEEC--C----GGGGTTCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHH-hcCCeEEEECC----HHHhCCCCEEEE
Confidence 457999999998888765544312222389999999877653 444432211 12355655433 224578999999
Q ss_pred cCcCCC----CHHH--------HHHHHHHHHhccccCcEEEEEe
Q 039591 209 AALVGM----SKEE--------KMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~~~----~~~~--------k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.+.... ...+ -.++.+.+.++ .|++.+++.+
T Consensus 81 ~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~t 123 (318)
T 1y6j_A 81 TAGANRKPGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVILVVS 123 (318)
T ss_dssp CCCC------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEECS
T ss_pred cCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEEec
Confidence 876532 1111 14555666655 6999988854
No 439
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.73 E-value=0.021 Score=48.69 Aligned_cols=105 Identities=12% Similarity=0.101 Sum_probs=61.1
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
..+++||.||+|..|...+.... ..|+.|+.++.+.. +..+++.+. .+++++..+..+ .++..+|+||.
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll--~~GA~VtVvap~~~--~~l~~l~~~-----~~i~~i~~~~~~--~dL~~adLVIa 97 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFL--QEGAAITVVAPTVS--AEINEWEAK-----GQLRVKRKKVGE--EDLLNVFFIVV 97 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHG--GGCCCEEEECSSCC--HHHHHHHHT-----TSCEEECSCCCG--GGSSSCSEEEE
T ss_pred cCCCEEEEECCCHHHHHHHHHHH--HCCCEEEEECCCCC--HHHHHHHHc-----CCcEEEECCCCH--hHhCCCCEEEE
Confidence 46789999999988877665443 25788888875422 112233222 357777666542 45678999998
Q ss_pred cCcCCCCHHHHHHHHHHHHhccccCcEEEEEe-ccchhhhcCCCC
Q 039591 209 AALVGMSKEEKMKIIRHIRKYMKDGGILLVRS-AKGARAFLYPVV 252 (284)
Q Consensus 209 ~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~-~~g~~~~lyp~v 252 (284)
+... ..+-..+....+ -|+++.+. ......|.+|.+
T Consensus 98 AT~d-------~~~N~~I~~~ak-~gi~VNvvD~p~~~~f~~Pai 134 (223)
T 3dfz_A 98 ATND-------QAVNKFVKQHIK-NDQLVNMASSFSDGNIQIPAQ 134 (223)
T ss_dssp CCCC-------THHHHHHHHHSC-TTCEEEC-----CCSEECCEE
T ss_pred CCCC-------HHHHHHHHHHHh-CCCEEEEeCCcccCeEEEeeE
Confidence 8654 122233343445 56665443 233455666644
No 440
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=95.73 E-value=0.12 Score=45.82 Aligned_cols=101 Identities=18% Similarity=0.174 Sum_probs=58.8
Q ss_pred CCCeEEEecCCCChHHHHH-HHhhcCCCc--EEEEEeCCHHHHH-HHHHHHhhccCCCCCeEEEEc-chhhhhccCCCcc
Q 039591 130 QPKKVAFVGSGPMPLTSIV-MAKNHLKAT--HFDNFDIDEAANN-VARRIVATDFEFEKRMKFLTG-DILQVKEKLGEYD 204 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~ai~-la~~~~~~~--~V~~vDis~~~~~-~A~~~~~~~~~l~~~v~~~~~-D~~~~~~~l~~fD 204 (284)
...+|..||+|.+|..... |++ .|. +|+.+|++++.++ .+.+...... +....++... |. ..+..+|
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~---~g~~~~V~l~d~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~----~~~~~aD 77 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQ---RGIAREIVLEDIAKERVEAEVLDMQHGSS-FYPTVSIDGSDDP----EICRDAD 77 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH---TTCCSEEEEECSSHHHHHHHHHHHHHTGG-GSTTCEEEEESCG----GGGTTCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHh---CCCCCEEEEEeCChhHHHHHHHHHHhhhh-hcCCeEEEeCCCH----HHhCCCC
Confidence 4579999999988876443 443 455 8999999997765 2222211111 1113343333 32 2346799
Q ss_pred EEEEcCcCCC----CH--------HHHHHHHHHHHhccccCcEEEEE
Q 039591 205 CIFLAALVGM----SK--------EEKMKIIRHIRKYMKDGGILLVR 239 (284)
Q Consensus 205 ~V~~~~~~~~----~~--------~~k~~~l~~~~~~L~pGG~lv~~ 239 (284)
+|+++..... .. .-..++++.+.++ .|++.++..
T Consensus 78 ~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~~ 123 (319)
T 1lld_A 78 MVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYMLI 123 (319)
T ss_dssp EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEEC
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEe
Confidence 9999874322 11 1123667777664 788887653
No 441
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.68 E-value=0.052 Score=50.90 Aligned_cols=74 Identities=14% Similarity=0.067 Sum_probs=48.6
Q ss_pred CCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHH-HHHHHHHhhccCCCCCeEEEEcchhhhhccCCC-ccEEE
Q 039591 130 QPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAAN-NVARRIVATDFEFEKRMKFLTGDILQVKEKLGE-YDCIF 207 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~-~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~-fD~V~ 207 (284)
.+++|++||.|+.|+++..+.. ..|.+|++.|..+... ...++ +++. .+.+..+...+. .+.. +|+|+
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~--~~G~~V~~~D~~~~~~~~~~~~-L~~~-----gi~~~~g~~~~~--~~~~~~d~vv 77 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLA--KLGAIVTVNDGKPFDENPTAQS-LLEE-----GIKVVCGSHPLE--LLDEDFCYMI 77 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHH--HTTCEEEEEESSCGGGCHHHHH-HHHT-----TCEEEESCCCGG--GGGSCEEEEE
T ss_pred CCCEEEEEeeCHHHHHHHHHHH--hCCCEEEEEeCCcccCChHHHH-HHhC-----CCEEEECCChHH--hhcCCCCEEE
Confidence 5789999999999998766554 3789999999965311 12222 2332 366666654321 1234 99999
Q ss_pred EcCcCC
Q 039591 208 LAALVG 213 (284)
Q Consensus 208 ~~~~~~ 213 (284)
.++.+.
T Consensus 78 ~spgi~ 83 (451)
T 3lk7_A 78 KNPGIP 83 (451)
T ss_dssp ECTTSC
T ss_pred ECCcCC
Confidence 987664
No 442
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=95.61 E-value=0.18 Score=44.07 Aligned_cols=104 Identities=17% Similarity=0.294 Sum_probs=69.2
Q ss_pred CCCeEEEecCCCChHHH---HHHHhhcCCCcEEEEEeCCHH-HHHHHHHHHhhccCCCCCeEEEEcchhhhh--------
Q 039591 130 QPKKVAFVGSGPMPLTS---IVMAKNHLKATHFDNFDIDEA-ANNVARRIVATDFEFEKRMKFLTGDILQVK-------- 197 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~a---i~la~~~~~~~~V~~vDis~~-~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~-------- 197 (284)
.++++|..|++ .|+-. ..|++ .|++|+.++.+++ ..+...+..+..+ .++.++.+|+.+..
T Consensus 46 ~gk~vlVTGas-~GIG~aia~~la~---~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~ 118 (291)
T 3ijr_A 46 KGKNVLITGGD-SGIGRAVSIAFAK---EGANIAIAYLDEEGDANETKQYVEKEG---VKCVLLPGDLSDEQHCKDIVQE 118 (291)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH---TTCEEEEEESSCHHHHHHHHHHHHTTT---CCEEEEESCTTSHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHH---CCCEEEEEeCCchHHHHHHHHHHHhcC---CcEEEEECCCCCHHHHHHHHHH
Confidence 56799999988 67643 23444 6889999999876 3444444444433 67899999987632
Q ss_pred --ccCCCccEEEEcCcCCC--------CHHHH-----------HHHHHHHHhccccCcEEEEEe
Q 039591 198 --EKLGEYDCIFLAALVGM--------SKEEK-----------MKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 198 --~~l~~fD~V~~~~~~~~--------~~~~k-----------~~~l~~~~~~L~pGG~lv~~~ 240 (284)
...++.|+++.++.... ..++. ..+.+.+.+.|+++|.++..+
T Consensus 119 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 119 TVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp HHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred HHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 11257999998865421 22221 346677788899999888766
No 443
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=95.59 E-value=0.051 Score=45.94 Aligned_cols=94 Identities=11% Similarity=0.133 Sum_probs=62.4
Q ss_pred CCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhh----ccCCCccE
Q 039591 130 QPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVK----EKLGEYDC 205 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~----~~l~~fD~ 205 (284)
...+|+.+|+|..|........ ..|. |+++|.+++.++.++ . .+.++.+|+.+.. ..+..+|.
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~--~~g~-v~vid~~~~~~~~~~----~------~~~~i~gd~~~~~~l~~a~i~~ad~ 74 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELR--GSEV-FVLAEDENVRKKVLR----S------GANFVHGDPTRVSDLEKANVRGARA 74 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHST--TSEE-EEEESCGGGHHHHHH----T------TCEEEESCTTCHHHHHHTTCTTCSE
T ss_pred CCCEEEEECCChHHHHHHHHHH--hCCe-EEEEECCHHHHHHHh----c------CCeEEEcCCCCHHHHHhcCcchhcE
Confidence 4568999999977754433332 2456 999999999876554 1 2678889987531 12478999
Q ss_pred EEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 206 IFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 206 V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|+.+... ......+...++.+.|+..++.+.
T Consensus 75 vi~~~~~----d~~n~~~~~~a~~~~~~~~iia~~ 105 (234)
T 2aef_A 75 VIVDLES----DSETIHCILGIRKIDESVRIIAEA 105 (234)
T ss_dssp EEECCSC----HHHHHHHHHHHHHHCSSSEEEEEC
T ss_pred EEEcCCC----cHHHHHHHHHHHHHCCCCeEEEEE
Confidence 9987653 233444555667788887888764
No 444
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=95.56 E-value=0.3 Score=42.73 Aligned_cols=105 Identities=16% Similarity=0.161 Sum_probs=70.6
Q ss_pred CCCCeEEEecCCC---ChHH-HHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhh-------
Q 039591 129 VQPKKVAFVGSGP---MPLT-SIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVK------- 197 (284)
Q Consensus 129 ~~~~~VL~iGsGp---~G~~-ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~------- 197 (284)
-.++++|..|++. +|.. +..|++ .|++|+.++.++...+.+++..+.. .++.++..|+.+..
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~---~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~ 101 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAARE---AGAELAFTYQGDALKKRVEPLAEEL----GAFVAGHCDVADAASIDAVFE 101 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHH---TTCEEEEEECSHHHHHHHHHHHHHH----TCEEEEECCTTCHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHH---CCCEEEEEcCCHHHHHHHHHHHHhc----CCceEEECCCCCHHHHHHHHH
Confidence 3567899999641 4433 334555 6899999999987777777766553 35788999987632
Q ss_pred ---ccCCCccEEEEcCcCCC-----------CHHHH-----------HHHHHHHHhccccCcEEEEEe
Q 039591 198 ---EKLGEYDCIFLAALVGM-----------SKEEK-----------MKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 198 ---~~l~~fD~V~~~~~~~~-----------~~~~k-----------~~~l~~~~~~L~pGG~lv~~~ 240 (284)
...++.|+++.++.... ..++. ..+.+.+.+.|+++|.++..+
T Consensus 102 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~is 169 (293)
T 3grk_A 102 TLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLT 169 (293)
T ss_dssp HHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred HHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEe
Confidence 12268999998876531 11211 345667778888899888766
No 445
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=95.55 E-value=0.18 Score=44.27 Aligned_cols=105 Identities=15% Similarity=0.142 Sum_probs=70.4
Q ss_pred CCCeEEEecCC---CChHH-HHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhh--------
Q 039591 130 QPKKVAFVGSG---PMPLT-SIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVK-------- 197 (284)
Q Consensus 130 ~~~~VL~iGsG---p~G~~-ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~-------- 197 (284)
.++++|..|++ -+|.. +..|++ .|++|+.+|.++...+..++..+..+ ++.++..|+.+..
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~---~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~ 101 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCA---QGAEVALTYLSETFKKRVDPLAESLG----VKLTVPCDVSDAESVDNMFKV 101 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHH---TTCEEEEEESSGGGHHHHHHHHHHHT----CCEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHH---CCCEEEEEeCChHHHHHHHHHHHhcC----CeEEEEcCCCCHHHHHHHHHH
Confidence 46789999974 15543 444555 68999999999877777666665533 3678889987632
Q ss_pred --ccCCCccEEEEcCcCCC-----------CHHHH-----------HHHHHHHHhccccCcEEEEEec
Q 039591 198 --EKLGEYDCIFLAALVGM-----------SKEEK-----------MKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 198 --~~l~~fD~V~~~~~~~~-----------~~~~k-----------~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
...++.|+++.++.... ..++. ..+.+.+.+.|+++|.++..+.
T Consensus 102 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS 169 (296)
T 3k31_A 102 LAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSY 169 (296)
T ss_dssp HHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred HHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEe
Confidence 11268899998876531 11221 3456677788888998887663
No 446
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=95.53 E-value=0.047 Score=48.97 Aligned_cols=98 Identities=20% Similarity=0.236 Sum_probs=62.5
Q ss_pred CeEEEecCCCChHHHH-HHHhhcCCCcEEEEEeCCHHHHHHHHHHHh-hccC--CC--CCeEEEEcchhhhhccCCCccE
Q 039591 132 KKVAFVGSGPMPLTSI-VMAKNHLKATHFDNFDIDEAANNVARRIVA-TDFE--FE--KRMKFLTGDILQVKEKLGEYDC 205 (284)
Q Consensus 132 ~~VL~iGsGp~G~~ai-~la~~~~~~~~V~~vDis~~~~~~A~~~~~-~~~~--l~--~~v~~~~~D~~~~~~~l~~fD~ 205 (284)
.+|+.||+|.+|.... .|++ .|.+|+.+|.+++.++..++... ...+ .. .++.....|..+. +..+|+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~D~ 78 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLAL---KGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLA---VKDADV 78 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---TTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHH---HTTCSE
T ss_pred CeEEEECCCHHHHHHHHHHHh---CCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHH---HhcCCE
Confidence 5899999997775433 3444 56889999999998877665411 0000 00 0010122343321 257999
Q ss_pred EEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEE
Q 039591 206 IFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVR 239 (284)
Q Consensus 206 V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~ 239 (284)
|+++.... ...++++.+.+.+++|..++..
T Consensus 79 vi~~v~~~----~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 79 ILIVVPAI----HHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp EEECSCGG----GHHHHHHHHGGGCCTTCEEEES
T ss_pred EEEeCCch----HHHHHHHHHHHhCCCCCEEEEc
Confidence 99987652 2367888999999999877655
No 447
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.52 E-value=0.027 Score=43.22 Aligned_cols=95 Identities=12% Similarity=0.106 Sum_probs=58.5
Q ss_pred CCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhh--hcc--CCCccEE
Q 039591 131 PKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQV--KEK--LGEYDCI 206 (284)
Q Consensus 131 ~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~--~~~--l~~fD~V 206 (284)
.++|+.+|+|.+|........ ..|.+|+.+|.+++..+.++ . ....++.+|..+. ... .+.+|+|
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~--~~g~~v~~~d~~~~~~~~~~----~-----~~~~~~~~d~~~~~~l~~~~~~~~d~v 74 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELH--RMGHEVLAVDINEEKVNAYA----S-----YATHAVIANATEENELLSLGIRNFEYV 74 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHH--HTTCCCEEEESCHHHHHTTT----T-----TCSEEEECCTTCHHHHHTTTGGGCSEE
T ss_pred CCcEEEECCCHHHHHHHHHHH--HCCCEEEEEeCCHHHHHHHH----H-----hCCEEEEeCCCCHHHHHhcCCCCCCEE
Confidence 468999999988877655443 25678999999987654332 1 1235566776532 111 3679999
Q ss_pred EEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 207 FLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 207 ~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+.+.... .+....+....+.+.++ .++.+.
T Consensus 75 i~~~~~~---~~~~~~~~~~~~~~~~~-~ii~~~ 104 (144)
T 2hmt_A 75 IVAIGAN---IQASTLTTLLLKELDIP-NIWVKA 104 (144)
T ss_dssp EECCCSC---HHHHHHHHHHHHHTTCS-EEEEEC
T ss_pred EECCCCc---hHHHHHHHHHHHHcCCC-eEEEEe
Confidence 9886541 12223344455567776 666554
No 448
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=95.51 E-value=0.068 Score=46.41 Aligned_cols=89 Identities=17% Similarity=0.148 Sum_probs=59.2
Q ss_pred CeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEEcCc
Q 039591 132 KKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFLAAL 211 (284)
Q Consensus 132 ~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~~~~ 211 (284)
.+|..||+|.+|..-..... . |.+|+.+|.+++..+..++. | . . .. +..+ .+...|+|+++..
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~--~-g~~V~~~~~~~~~~~~~~~~----g-~--~--~~--~~~~---~~~~~D~vi~~v~ 64 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLA--R-RFPTLVWNRTFEKALRHQEE----F-G--S--EA--VPLE---RVAEARVIFTCLP 64 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHH--T-TSCEEEECSSTHHHHHHHHH----H-C--C--EE--CCGG---GGGGCSEEEECCS
T ss_pred CeEEEEcccHHHHHHHHHHh--C-CCeEEEEeCCHHHHHHHHHC----C-C--c--cc--CHHH---HHhCCCEEEEeCC
Confidence 37999999999976444333 3 77899999999887765543 3 1 1 11 1111 1256899999876
Q ss_pred CCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 212 VGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 212 ~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
. ......+++.+.+.+++|..++..+
T Consensus 65 ~---~~~~~~v~~~l~~~l~~~~~vv~~s 90 (289)
T 2cvz_A 65 T---TREVYEVAEALYPYLREGTYWVDAT 90 (289)
T ss_dssp S---HHHHHHHHHHHTTTCCTTEEEEECS
T ss_pred C---hHHHHHHHHHHHhhCCCCCEEEECC
Confidence 4 1224557788888899888777543
No 449
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=95.50 E-value=0.03 Score=52.02 Aligned_cols=62 Identities=8% Similarity=0.015 Sum_probs=47.0
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCC-CcEEEEEeCCHHHHHHHHHHHhhc--cCCCCCeEEEEc
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLK-ATHFDNFDIDEAANNVARRIVATD--FEFEKRMKFLTG 191 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~-~~~V~~vDis~~~~~~A~~~~~~~--~~l~~~v~~~~~ 191 (284)
.+++.|+|||++ .|..++.++++..+ .++|+++|.+|...+..+++++.+ ++.+.+++++..
T Consensus 225 ~~~~~viDvGAn-~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~ 289 (409)
T 2py6_A 225 SDSEKMVDCGAS-IGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGC 289 (409)
T ss_dssp CSSCEEEEETCT-TSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECS
T ss_pred CCCCEEEECCCC-cCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEe
Confidence 678899999999 99999988831344 379999999999999999998752 111145555543
No 450
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=95.50 E-value=0.17 Score=42.83 Aligned_cols=76 Identities=17% Similarity=0.187 Sum_probs=55.1
Q ss_pred CCCeEEEecCCCChHHH---HHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhh---------
Q 039591 130 QPKKVAFVGSGPMPLTS---IVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVK--------- 197 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~a---i~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~--------- 197 (284)
.+++||..|++ .|+-. ..|++ .|++|+.+|.+++..+...+.+...+ .++.++..|+.+..
T Consensus 8 ~~k~vlITGas-~giG~~~a~~l~~---~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~ 80 (253)
T 3qiv_A 8 ENKVGIVTGSG-GGIGQAYAEALAR---EGAAVVVADINAEAAEAVAKQIVADG---GTAISVAVDVSDPESAKAMADRT 80 (253)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHHTT---CEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHH---CCCEEEEEcCCHHHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHHH
Confidence 56789999987 66532 23444 68899999999998887776665533 57899999987632
Q ss_pred -ccCCCccEEEEcCcC
Q 039591 198 -EKLGEYDCIFLAALV 212 (284)
Q Consensus 198 -~~l~~fD~V~~~~~~ 212 (284)
...++.|+++.++..
T Consensus 81 ~~~~g~id~li~~Ag~ 96 (253)
T 3qiv_A 81 LAEFGGIDYLVNNAAI 96 (253)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCc
Confidence 112589999988754
No 451
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=95.49 E-value=0.024 Score=50.48 Aligned_cols=94 Identities=13% Similarity=0.153 Sum_probs=55.6
Q ss_pred CeEEEecCCCChHHHH-HHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEE----EEcchhhhhccCCCccEE
Q 039591 132 KKVAFVGSGPMPLTSI-VMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKF----LTGDILQVKEKLGEYDCI 206 (284)
Q Consensus 132 ~~VL~iGsGp~G~~ai-~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~----~~~D~~~~~~~l~~fD~V 206 (284)
.+|+.||+|.+|..-. .|++ .|..|+.++.++ . +..++.--.........++ ...|.. ..+.+|+|
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~---~g~~V~~~~r~~-~-~~i~~~g~~~~~~~g~~~~~~~~~~~~~~----~~~~~D~v 73 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQR---SGEDVHFLLRRD-Y-EAIAGNGLKVFSINGDFTLPHVKGYRAPE----EIGPMDLV 73 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHH---TSCCEEEECSTT-H-HHHHHTCEEEEETTCCEEESCCCEESCHH----HHCCCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHH---CCCeEEEEEcCc-H-HHHHhCCCEEEcCCCeEEEeeceeecCHH----HcCCCCEE
Confidence 4799999998886533 3554 567899999987 2 3332210000000011221 112221 23679999
Q ss_pred EEcCcCCCCHHHHHHHHHHHHhccccCcEEEE
Q 039591 207 FLAALVGMSKEEKMKIIRHIRKYMKDGGILLV 238 (284)
Q Consensus 207 ~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~ 238 (284)
+++..... -.++++.+...++|+..++.
T Consensus 74 ilavk~~~----~~~~l~~l~~~l~~~~~iv~ 101 (312)
T 3hn2_A 74 LVGLKTFA----NSRYEELIRPLVEEGTQILT 101 (312)
T ss_dssp EECCCGGG----GGGHHHHHGGGCCTTCEEEE
T ss_pred EEecCCCC----cHHHHHHHHhhcCCCCEEEE
Confidence 99865422 25788899999999987654
No 452
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=95.47 E-value=0.026 Score=50.90 Aligned_cols=103 Identities=19% Similarity=0.176 Sum_probs=65.0
Q ss_pred CCCCeEEEecCCCChHHHHH-HHhhcCCCc-EEEEEeCCHHHHHHHH-HHHh---hccCCCCCeEEEEcchhhhhccCCC
Q 039591 129 VQPKKVAFVGSGPMPLTSIV-MAKNHLKAT-HFDNFDIDEAANNVAR-RIVA---TDFEFEKRMKFLTGDILQVKEKLGE 202 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~-la~~~~~~~-~V~~vDis~~~~~~A~-~~~~---~~~~l~~~v~~~~~D~~~~~~~l~~ 202 (284)
+...+|..||+|..|..... ++. .+. .|+.+|++++.++... .... .++ ...++++ +.|..+ .+..
T Consensus 7 ~~~~kI~VIGaG~vG~~lA~~la~---~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~-~~~~i~~-t~d~~e---a~~~ 78 (331)
T 1pzg_A 7 QRRKKVAMIGSGMIGGTMGYLCAL---RELADVVLYDVVKGMPEGKALDLSHVTSVVD-TNVSVRA-EYSYEA---ALTG 78 (331)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHH---HTCCEEEEECSSSSHHHHHHHHHHHHHHHTT-CCCCEEE-ECSHHH---HHTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh---CCCCeEEEEECChhHHHHHHHHHHhhhhccC-CCCEEEE-eCCHHH---HhCC
Confidence 34569999999988876443 443 344 7999999998777632 2211 112 2234554 356542 2367
Q ss_pred ccEEEEcCcCC----C-----CH--------HHHHHHHHHHHhccccCcEEEEEe
Q 039591 203 YDCIFLAALVG----M-----SK--------EEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 203 fD~V~~~~~~~----~-----~~--------~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.|+|+++.... + .. +-+.++++.+.++. |.+.+++.+
T Consensus 79 aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~t 132 (331)
T 1pzg_A 79 ADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIVVT 132 (331)
T ss_dssp CSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECC
T ss_pred CCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEc
Confidence 99999987432 2 11 22678888888775 899887644
No 453
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=95.47 E-value=0.085 Score=46.34 Aligned_cols=90 Identities=16% Similarity=0.141 Sum_probs=61.5
Q ss_pred CeEEEecCCCChHHHH-HHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEEcC
Q 039591 132 KKVAFVGSGPMPLTSI-VMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFLAA 210 (284)
Q Consensus 132 ~~VL~iGsGp~G~~ai-~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~~~ 210 (284)
.+|.+||+|.+|..-. .|++ .|.+|+++|.+++.++..++. + +.+ ..|..+. ....|+|+++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~---~G~~V~~~d~~~~~~~~~~~~----g-----~~~-~~~~~~~---~~~aDvvi~~v 67 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLK---AGYLLNVFDLVQSAVDGLVAA----G-----ASA-ARSARDA---VQGADVVISML 67 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHH---TTCEEEEECSSHHHHHHHHHT----T-----CEE-CSSHHHH---HTTCSEEEECC
T ss_pred CEEEEEeecHHHHHHHHHHHh---CCCeEEEEcCCHHHHHHHHHC----C-----CeE-cCCHHHH---HhCCCeEEEEC
Confidence 5899999999997643 3444 578999999999987765542 2 222 2344332 25689999987
Q ss_pred cCCCCHHHHHHHHH---HHHhccccCcEEEEEe
Q 039591 211 LVGMSKEEKMKIIR---HIRKYMKDGGILLVRS 240 (284)
Q Consensus 211 ~~~~~~~~k~~~l~---~~~~~L~pGG~lv~~~ 240 (284)
+. +..-..++. .+.+.+++|.+++..+
T Consensus 68 p~---~~~~~~v~~~~~~~~~~l~~~~~vi~~s 97 (302)
T 2h78_A 68 PA---SQHVEGLYLDDDGLLAHIAPGTLVLECS 97 (302)
T ss_dssp SC---HHHHHHHHHSSSCGGGSSCSSCEEEECS
T ss_pred CC---HHHHHHHHcCchhHHhcCCCCcEEEECC
Confidence 54 233456666 7778899988777543
No 454
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=95.47 E-value=0.11 Score=46.52 Aligned_cols=99 Identities=22% Similarity=0.307 Sum_probs=59.9
Q ss_pred CeEEEecCCCChHHHHH-HHhhcCCCc--EEEEEeCCHHHHHHHHHHHhh-ccCCCCCeEEEEcchhhhhccCCCccEEE
Q 039591 132 KKVAFVGSGPMPLTSIV-MAKNHLKAT--HFDNFDIDEAANNVARRIVAT-DFEFEKRMKFLTGDILQVKEKLGEYDCIF 207 (284)
Q Consensus 132 ~~VL~iGsGp~G~~ai~-la~~~~~~~--~V~~vDis~~~~~~A~~~~~~-~~~l~~~v~~~~~D~~~~~~~l~~fD~V~ 207 (284)
.+|..||+|.+|..... +++ .+. .|+.+|++++.++........ .. .....++...|. ..+...|+|+
T Consensus 1 mkI~VIGaG~~G~~la~~l~~---~g~~~~V~l~D~~~~~~~~~~~~l~~~~~-~~~~~~i~~~d~----~~~~~aDvVi 72 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLM---KGFAREMVLIDVDKKRAEGDALDLIHGTP-FTRRANIYAGDY----ADLKGSDVVI 72 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---HTCCSEEEEECSSHHHHHHHHHHHHHHGG-GSCCCEEEECCG----GGGTTCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHh---CCCCCeEEEEeCChHHHHHHHHHHHhhhh-hcCCcEEEeCCH----HHhCCCCEEE
Confidence 37999999988876443 333 344 899999999877764432221 11 111233333342 2346899999
Q ss_pred EcCcCCCC----HHH--------HHHHHHHHHhccccCcEEEEE
Q 039591 208 LAALVGMS----KEE--------KMKIIRHIRKYMKDGGILLVR 239 (284)
Q Consensus 208 ~~~~~~~~----~~~--------k~~~l~~~~~~L~pGG~lv~~ 239 (284)
++...+.. ..+ ..++++.+.++ .|++.+++.
T Consensus 73 iav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~~~~~ii~~ 115 (319)
T 1a5z_A 73 VAAGVPQKPGETRLQLLGRNARVMKEIARNVSKY-APDSIVIVV 115 (319)
T ss_dssp ECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEC
T ss_pred EccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEe
Confidence 98765321 222 35667777666 588887664
No 455
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=95.36 E-value=0.22 Score=44.16 Aligned_cols=103 Identities=23% Similarity=0.263 Sum_probs=60.1
Q ss_pred CeEEEecCCCChHHHHH-HHhhcCCCcEEEEEeCCHHHHH-HHHHHHhhccCCCCCeEEE-EcchhhhhccCCCccEEEE
Q 039591 132 KKVAFVGSGPMPLTSIV-MAKNHLKATHFDNFDIDEAANN-VARRIVATDFEFEKRMKFL-TGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 132 ~~VL~iGsGp~G~~ai~-la~~~~~~~~V~~vDis~~~~~-~A~~~~~~~~~l~~~v~~~-~~D~~~~~~~l~~fD~V~~ 208 (284)
.+|..+|+|..|.+... ++. .....+++.+|++++.++ .+.++......+....++. ..| . ..+...|+|++
T Consensus 1 MkI~ViGaG~vG~~la~~l~~-~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~---~a~~~aDiVVi 75 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLL-NLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-Y---SLLKGSEIIVV 75 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-HSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-G---GGGTTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHh-CCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-H---HHhCCCCEEEE
Confidence 37999999988876554 343 222238999999998865 2222211110011233443 345 2 24478999999
Q ss_pred cCcC----CCCHHH--------HHHHHHHHHhccccCcEEEEEe
Q 039591 209 AALV----GMSKEE--------KMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~----~~~~~~--------k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.+.. ++...+ -..+.+.+.++ .|++++++.+
T Consensus 76 aag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~iivvs 118 (294)
T 1oju_A 76 TAGLARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILVVT 118 (294)
T ss_dssp CCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEECS
T ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEeC
Confidence 8755 333222 13444555555 7899988866
No 456
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=95.33 E-value=0.058 Score=47.15 Aligned_cols=90 Identities=21% Similarity=0.218 Sum_probs=60.6
Q ss_pred CeEEEecC-CCChHHHH-HHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEEc
Q 039591 132 KKVAFVGS-GPMPLTSI-VMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFLA 209 (284)
Q Consensus 132 ~~VL~iGs-Gp~G~~ai-~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~~ 209 (284)
.+|.+||+ |-+|..-. .|++ .|.+|+++|.+++.++.+++ .| . ++ .+..+ .....|+|+++
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~---~g~~V~~~~r~~~~~~~~~~----~g-~----~~--~~~~~---~~~~aDvVi~a 74 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHD---SAHHLAAIEIAPEGRDRLQG----MG-I----PL--TDGDG---WIDEADVVVLA 74 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH---SSSEEEEECCSHHHHHHHHH----TT-C----CC--CCSSG---GGGTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHh---CCCEEEEEECCHHHHHHHHh----cC-C----Cc--CCHHH---HhcCCCEEEEc
Confidence 48999999 97775533 3443 56799999999988876654 23 1 11 13222 23579999998
Q ss_pred CcCCCCHHHHHHHHHHHHhccccCcEEEEEeccc
Q 039591 210 ALVGMSKEEKMKIIRHIRKYMKDGGILLVRSAKG 243 (284)
Q Consensus 210 ~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~~g 243 (284)
... ....++++.+.+.++||.+++- ...+
T Consensus 75 v~~----~~~~~v~~~l~~~l~~~~ivv~-~s~~ 103 (286)
T 3c24_A 75 LPD----NIIEKVAEDIVPRVRPGTIVLI-LDAA 103 (286)
T ss_dssp SCH----HHHHHHHHHHGGGSCTTCEEEE-SCSH
T ss_pred CCc----hHHHHHHHHHHHhCCCCCEEEE-CCCC
Confidence 754 3357788888888988886664 4344
No 457
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=95.33 E-value=0.12 Score=44.11 Aligned_cols=105 Identities=10% Similarity=0.080 Sum_probs=69.6
Q ss_pred CCCCeEEEecCC---CChHHH-HHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhh-------
Q 039591 129 VQPKKVAFVGSG---PMPLTS-IVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVK------- 197 (284)
Q Consensus 129 ~~~~~VL~iGsG---p~G~~a-i~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~------- 197 (284)
..+++||..|++ -+|... ..|++ .|++|+.++.++...+..++..+..+ ++.++..|+.+..
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~---~G~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~Dv~~~~~v~~~~~ 84 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKR---EGAELAFTYVGDRFKDRITEFAAEFG----SELVFPCDVADDAQIDALFA 84 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHH---TTCEEEEEESSGGGHHHHHHHHHHTT----CCCEEECCTTCHHHHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHH---cCCCEEEEecchhhHHHHHHHHHHcC----CcEEEECCCCCHHHHHHHHH
Confidence 467899999942 266543 34554 68899999999776666666655532 4788899987632
Q ss_pred ---ccCCCccEEEEcCcCC------------CCHHHH-----------HHHHHHHHhccccCcEEEEEe
Q 039591 198 ---EKLGEYDCIFLAALVG------------MSKEEK-----------MKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 198 ---~~l~~fD~V~~~~~~~------------~~~~~k-----------~~~l~~~~~~L~pGG~lv~~~ 240 (284)
...++.|+++.++... ...++. ..+.+.+.+.|+++|.++..+
T Consensus 85 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 153 (271)
T 3ek2_A 85 SLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLS 153 (271)
T ss_dssp HHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred HHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEe
Confidence 1225789999887542 222221 345566778888888887766
No 458
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=95.29 E-value=0.04 Score=49.95 Aligned_cols=72 Identities=18% Similarity=0.234 Sum_probs=52.6
Q ss_pred CCeEEEecCCCChHHHHHHHhhcCC-CcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhc-cCC--CccEE
Q 039591 131 PKKVAFVGSGPMPLTSIVMAKNHLK-ATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKE-KLG--EYDCI 206 (284)
Q Consensus 131 ~~~VL~iGsGp~G~~ai~la~~~~~-~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~-~l~--~fD~V 206 (284)
+.+|+|+-|| .|..++-+.+ ... -..|.++|+|+.+++..+.|+.. ..++++|+.+... .+. .+|+|
T Consensus 2 ~~~v~dLFaG-~Gg~~~g~~~-~G~~~~~v~~~E~d~~a~~~~~~N~~~-------~~~~~~Di~~~~~~~~~~~~~D~l 72 (343)
T 1g55_A 2 PLRVLELYSG-VGGMHHALRE-SCIPAQVVAAIDVNTVANEVYKYNFPH-------TQLLAKTIEGITLEEFDRLSFDMI 72 (343)
T ss_dssp CEEEEEETCT-TCHHHHHHHH-HTCSEEEEEEECCCHHHHHHHHHHCTT-------SCEECSCGGGCCHHHHHHHCCSEE
T ss_pred CCeEEEeCcC-ccHHHHHHHH-CCCCceEEEEEeCCHHHHHHHHHhccc-------cccccCCHHHccHhHcCcCCcCEE
Confidence 3589999999 7777777776 111 13699999999999999998642 3467899887532 222 69999
Q ss_pred EEcCc
Q 039591 207 FLAAL 211 (284)
Q Consensus 207 ~~~~~ 211 (284)
+...+
T Consensus 73 ~~gpP 77 (343)
T 1g55_A 73 LMSPP 77 (343)
T ss_dssp EECCC
T ss_pred EEcCC
Confidence 98765
No 459
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=95.28 E-value=0.18 Score=43.19 Aligned_cols=101 Identities=19% Similarity=0.235 Sum_probs=69.1
Q ss_pred CCCeEEEecCCCChHHH---HHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhh---------
Q 039591 130 QPKKVAFVGSGPMPLTS---IVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVK--------- 197 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~a---i~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~--------- 197 (284)
.++++|..|++ .|+-. ..|++ .|++|+.+|.+++.++...+.. + .++.++..|+.+..
T Consensus 7 ~gk~~lVTGas-~gIG~a~a~~l~~---~G~~V~~~~r~~~~~~~~~~~~---~---~~~~~~~~Dv~~~~~v~~~~~~~ 76 (255)
T 4eso_A 7 QGKKAIVIGGT-HGMGLATVRRLVE---GGAEVLLTGRNESNIARIREEF---G---PRVHALRSDIADLNEIAVLGAAA 76 (255)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHH---TTCEEEEEESCHHHHHHHHHHH---G---GGEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHHHh---C---CcceEEEccCCCHHHHHHHHHHH
Confidence 56889999987 67643 23444 6889999999998876655433 3 46889999987632
Q ss_pred -ccCCCccEEEEcCcCCC-------CHHHH-----------HHHHHHHHhccccCcEEEEEe
Q 039591 198 -EKLGEYDCIFLAALVGM-------SKEEK-----------MKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 198 -~~l~~fD~V~~~~~~~~-------~~~~k-----------~~~l~~~~~~L~pGG~lv~~~ 240 (284)
...++.|+++.++.... ..++. ..+.+.+.+.|+++|.++..+
T Consensus 77 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 138 (255)
T 4eso_A 77 GQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTS 138 (255)
T ss_dssp HHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEEC
Confidence 11268999998876532 22221 335567778888889888766
No 460
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=95.27 E-value=0.22 Score=42.61 Aligned_cols=78 Identities=19% Similarity=0.117 Sum_probs=55.8
Q ss_pred CCCeEEEecC-CC-ChHHH-HHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhh---------
Q 039591 130 QPKKVAFVGS-GP-MPLTS-IVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVK--------- 197 (284)
Q Consensus 130 ~~~~VL~iGs-Gp-~G~~a-i~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~--------- 197 (284)
.+++||..|+ |. +|... ..|++ .|++|+.++.+++.++...+.++..+ ..++.++..|+.+..
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~---~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~ 95 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALL---EGADVVISDYHERRLGETRDQLADLG--LGRVEAVVCDVTSTEAVDALITQT 95 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHTTC--SSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHH---CCCEEEEecCCHHHHHHHHHHHHhcC--CCceEEEEeCCCCHHHHHHHHHHH
Confidence 5678999997 61 55433 33555 68999999999998887777665433 367999999987632
Q ss_pred -ccCCCccEEEEcCcC
Q 039591 198 -EKLGEYDCIFLAALV 212 (284)
Q Consensus 198 -~~l~~fD~V~~~~~~ 212 (284)
...++.|+++.++..
T Consensus 96 ~~~~g~id~li~~Ag~ 111 (266)
T 3o38_A 96 VEKAGRLDVLVNNAGL 111 (266)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHhCCCcEEEECCCc
Confidence 112578999988765
No 461
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=95.26 E-value=0.094 Score=52.32 Aligned_cols=99 Identities=20% Similarity=0.139 Sum_probs=67.0
Q ss_pred CeEEEecCCCChHHH-HHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhh----c---cC--------CCCCeEEEEcchhh
Q 039591 132 KKVAFVGSGPMPLTS-IVMAKNHLKATHFDNFDIDEAANNVARRIVAT----D---FE--------FEKRMKFLTGDILQ 195 (284)
Q Consensus 132 ~~VL~iGsGp~G~~a-i~la~~~~~~~~V~~vDis~~~~~~A~~~~~~----~---~~--------l~~~v~~~~~D~~~ 195 (284)
++|..||+|.+|..- ..+++ .|..|+.+|++++.++.+++.+.. + |. ...++++. .|.
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~---aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~-~d~-- 386 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALIL---SNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGS-LDY-- 386 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHT---TTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEE-SSS--
T ss_pred cEEEEEcCCHhhHHHHHHHHh---CCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEe-CCH--
Confidence 479999999888653 33444 678999999999999887553221 0 10 11234432 343
Q ss_pred hhccCCCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 196 VKEKLGEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 196 ~~~~l~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
..+...|+||.+... ...-|..++.++.+.++|+.+++..+
T Consensus 387 --~~~~~aDlVIeaVpe--~~~vk~~v~~~l~~~~~~~~Ilasnt 427 (725)
T 2wtb_A 387 --ESFRDVDMVIEAVIE--NISLKQQIFADLEKYCPQHCILASNT 427 (725)
T ss_dssp --GGGTTCSEEEECCCS--CHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred --HHHCCCCEEEEcCcC--CHHHHHHHHHHHHhhCCCCcEEEeCC
Confidence 134679999998654 33557889999999999998775543
No 462
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=95.25 E-value=0.096 Score=49.53 Aligned_cols=95 Identities=14% Similarity=0.142 Sum_probs=64.2
Q ss_pred CeEEEecCCCChHHH-HHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEEcC
Q 039591 132 KKVAFVGSGPMPLTS-IVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFLAA 210 (284)
Q Consensus 132 ~~VL~iGsGp~G~~a-i~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~~~ 210 (284)
.+|..||+|-+|..- ..|++ .|.+|+.+|.+++.++...+... + ..+. ...|..+....++..|+|+++.
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~---~G~~V~v~dr~~~~~~~l~~~~~--~---~gi~-~~~s~~e~v~~l~~aDvVilav 76 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVES---RGYTVAIYNRTTSKTEEVFKEHQ--D---KNLV-FTKTLEEFVGSLEKPRRIMLMV 76 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHH---TTCCEEEECSSHHHHHHHHHHTT--T---SCEE-ECSSHHHHHHTBCSSCEEEECC
T ss_pred CcEEEEeeHHHHHHHHHHHHh---CCCEEEEEcCCHHHHHHHHHhCc--C---CCeE-EeCCHHHHHhhccCCCEEEEEc
Confidence 479999999877653 33444 56789999999998876655321 1 2343 2355555444445699999987
Q ss_pred cCCCCHHHHHHHHHHHHhccccCcEEEE
Q 039591 211 LVGMSKEEKMKIIRHIRKYMKDGGILLV 238 (284)
Q Consensus 211 ~~~~~~~~k~~~l~~~~~~L~pGG~lv~ 238 (284)
..+ ..-..+++.+...++||.+++-
T Consensus 77 p~~---~~v~~vl~~l~~~l~~g~iiId 101 (474)
T 2iz1_A 77 QAG---AATDATIKSLLPLLDIGDILID 101 (474)
T ss_dssp CTT---HHHHHHHHHHGGGCCTTCEEEE
T ss_pred cCc---hHHHHHHHHHHhhCCCCCEEEE
Confidence 642 2335677888899999886653
No 463
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=95.23 E-value=0.066 Score=47.17 Aligned_cols=90 Identities=17% Similarity=0.223 Sum_probs=62.8
Q ss_pred CCeEEEecCCCChHHHH-HHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEEc
Q 039591 131 PKKVAFVGSGPMPLTSI-VMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFLA 209 (284)
Q Consensus 131 ~~~VL~iGsGp~G~~ai-~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~~ 209 (284)
..+|.+||+|-+|..-. .|++ .|.+|+++|++++.++.+++. + +++ ..|..+. .. .|+|+++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~---~G~~V~~~dr~~~~~~~~~~~----g-----~~~-~~~~~~~---~~-aDvvi~~ 77 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTE---WPGGVTVYDIRIEAMTPLAEA----G-----ATL-ADSVADV---AA-ADLIHIT 77 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTT---STTCEEEECSSTTTSHHHHHT----T-----CEE-CSSHHHH---TT-SSEEEEC
T ss_pred CCeEEEECcCHHHHHHHHHHHH---CCCeEEEEeCCHHHHHHHHHC----C-----CEE-cCCHHHH---Hh-CCEEEEE
Confidence 35899999999997533 3443 578999999999887765542 2 222 3444432 25 8999998
Q ss_pred CcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 210 ALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 210 ~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
... ...-..+++.+.+.++||.+++..+
T Consensus 78 vp~---~~~~~~v~~~l~~~l~~g~ivv~~s 105 (296)
T 3qha_A 78 VLD---DAQVREVVGELAGHAKPGTVIAIHS 105 (296)
T ss_dssp CSS---HHHHHHHHHHHHTTCCTTCEEEECS
T ss_pred CCC---hHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 754 2344567789999999998887655
No 464
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=95.23 E-value=0.13 Score=46.41 Aligned_cols=105 Identities=14% Similarity=0.187 Sum_probs=72.2
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccC-------------------CCCCeEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFE-------------------FEKRMKFL 189 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~-------------------l~~~v~~~ 189 (284)
.+...|+.+||| +.-.+..+.. ..++.+++-+|. |+.++.-++.+...+. .+++.+++
T Consensus 96 ~~~~qVV~LGaG-lDTr~~RL~~-~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v 172 (334)
T 1rjd_A 96 NEKVQVVNLGCG-SDLRMLPLLQ-MFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLA 172 (334)
T ss_dssp CSSEEEEEETCT-TCCTHHHHHH-HCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEE
T ss_pred CCCcEEEEeCCC-CccHHHHhcC-cCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEE
Confidence 356789999999 8888887775 235677777777 8888888887765310 13689999
Q ss_pred Ecchhhhh------ccC---CCccEEEEcCc-CCCCHHHHHHHHHHHHhccccCcEEE
Q 039591 190 TGDILQVK------EKL---GEYDCIFLAAL-VGMSKEEKMKIIRHIRKYMKDGGILL 237 (284)
Q Consensus 190 ~~D~~~~~------~~l---~~fD~V~~~~~-~~~~~~~k~~~l~~~~~~L~pGG~lv 237 (284)
.+|+.+.. ... ....+++..+. ..+.++.-.++++.+.+.. |||.++
T Consensus 173 ~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v 229 (334)
T 1rjd_A 173 ACDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWI 229 (334)
T ss_dssp ECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEE
T ss_pred ecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEE
Confidence 99988631 112 23445554443 3566777889999999877 566654
No 465
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=95.22 E-value=0.21 Score=43.66 Aligned_cols=104 Identities=17% Similarity=0.235 Sum_probs=69.5
Q ss_pred CCCeEEEecCCCChHHH---HHHHhhcCCCcEEEEEeCC--HHHHHHHHHHHhhccCCCCCeEEEEcchhhhh-------
Q 039591 130 QPKKVAFVGSGPMPLTS---IVMAKNHLKATHFDNFDID--EAANNVARRIVATDFEFEKRMKFLTGDILQVK------- 197 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~a---i~la~~~~~~~~V~~vDis--~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~------- 197 (284)
.++++|..|++ .|+-. ..|++ .|++|+.++.+ +...+...+..+..+ .++.++.+|+.+..
T Consensus 48 ~~k~vlVTGas-~GIG~aia~~la~---~G~~V~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~ 120 (294)
T 3r3s_A 48 KDRKALVTGGD-SGIGRAAAIAYAR---EGADVAINYLPAEEEDAQQVKALIEECG---RKAVLLPGDLSDESFARSLVH 120 (294)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH---TTCEEEEECCGGGHHHHHHHHHHHHHTT---CCEEECCCCTTSHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHH---CCCEEEEEeCCcchhHHHHHHHHHHHcC---CcEEEEEecCCCHHHHHHHHH
Confidence 56789999988 67643 23444 68899999987 345555555555433 67899999987631
Q ss_pred ---ccCCCccEEEEcCcCCC--------CHHHH-----------HHHHHHHHhccccCcEEEEEe
Q 039591 198 ---EKLGEYDCIFLAALVGM--------SKEEK-----------MKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 198 ---~~l~~fD~V~~~~~~~~--------~~~~k-----------~~~l~~~~~~L~pGG~lv~~~ 240 (284)
...++.|+++.++.... ..++. ..+.+.+.+.|+++|.++..+
T Consensus 121 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~is 185 (294)
T 3r3s_A 121 KAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTS 185 (294)
T ss_dssp HHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEEC
Confidence 11268999998876521 11221 345677788899999988766
No 466
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=95.19 E-value=0.037 Score=52.54 Aligned_cols=89 Identities=17% Similarity=0.060 Sum_probs=59.5
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
..+++|+.+|+|++|......++ ..|++|+.+|+++.....+... + .. ..+..+ ....+|+|+.
T Consensus 263 L~GKtVvVtGaGgIG~aiA~~La--a~GA~Viv~D~~~~~a~~Aa~~----g-----~d--v~~lee---~~~~aDvVi~ 326 (488)
T 3ond_A 263 IAGKVAVVAGYGDVGKGCAAALK--QAGARVIVTEIDPICALQATME----G-----LQ--VLTLED---VVSEADIFVT 326 (488)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHH--HTTCEEEEECSCHHHHHHHHHT----T-----CE--ECCGGG---TTTTCSEEEE
T ss_pred ccCCEEEEECCCHHHHHHHHHHH--HCCCEEEEEcCCHHHHHHHHHh----C-----Cc--cCCHHH---HHHhcCEEEe
Confidence 57899999999988887666555 2578999999999887665542 2 11 123322 2357999987
Q ss_pred cCcCCCCHHHHHHHH-HHHHhccccCcEEEEEe
Q 039591 209 AALVGMSKEEKMKII-RHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~~~~~~~k~~~l-~~~~~~L~pGG~lv~~~ 240 (284)
..... .++ ....+.|++|++++..+
T Consensus 327 atG~~-------~vl~~e~l~~mk~gaiVvNaG 352 (488)
T 3ond_A 327 TTGNK-------DIIMLDHMKKMKNNAIVCNIG 352 (488)
T ss_dssp CSSCS-------CSBCHHHHTTSCTTEEEEESS
T ss_pred CCCCh-------hhhhHHHHHhcCCCeEEEEcC
Confidence 65431 112 23567899999776543
No 467
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=95.19 E-value=0.22 Score=43.72 Aligned_cols=77 Identities=17% Similarity=0.162 Sum_probs=56.1
Q ss_pred CCCCeEEEecCCCChHHH---HHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhc-------
Q 039591 129 VQPKKVAFVGSGPMPLTS---IVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKE------- 198 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~a---i~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~------- 198 (284)
-.+++||..|++ .|+-. ..|++ .|.+|+.++.+++.++.+.+.+...+ .++.++..|+.+...
T Consensus 29 l~gk~vlVTGas-~gIG~~la~~l~~---~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~d~~~v~~~~~~ 101 (301)
T 3tjr_A 29 FDGRAAVVTGGA-SGIGLATATEFAR---RGARLVLSDVDQPALEQAVNGLRGQG---FDAHGVVCDVRHLDEMVRLADE 101 (301)
T ss_dssp STTCEEEEETTT-SHHHHHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHH
T ss_pred cCCCEEEEeCCC-CHHHHHHHHHHHH---CCCEEEEEECCHHHHHHHHHHHHhcC---CceEEEEccCCCHHHHHHHHHH
Confidence 356789999988 66543 23443 68899999999999888776665533 578999999876321
Q ss_pred ---cCCCccEEEEcCcC
Q 039591 199 ---KLGEYDCIFLAALV 212 (284)
Q Consensus 199 ---~l~~fD~V~~~~~~ 212 (284)
..++.|+++.++..
T Consensus 102 ~~~~~g~id~lvnnAg~ 118 (301)
T 3tjr_A 102 AFRLLGGVDVVFSNAGI 118 (301)
T ss_dssp HHHHHSSCSEEEECCCC
T ss_pred HHHhCCCCCEEEECCCc
Confidence 12579999988765
No 468
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=95.16 E-value=0.31 Score=42.13 Aligned_cols=107 Identities=14% Similarity=0.090 Sum_probs=69.4
Q ss_pred CCCeEEEecCCCChHHH---HHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhh---------
Q 039591 130 QPKKVAFVGSGPMPLTS---IVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVK--------- 197 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~a---i~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~--------- 197 (284)
.+++||..|++ .|+-. ..|++ .|++|+.+|.+++..+.+.+.++..+....++.++.+|+.+..
T Consensus 10 ~~k~vlVTGas-~gIG~aia~~l~~---~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 85 (281)
T 3svt_A 10 QDRTYLVTGGG-SGIGKGVAAGLVA---AGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAV 85 (281)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence 56789999987 66543 23444 6889999999999888777666654422237899999987632
Q ss_pred -ccCCCccEEEEcCcC-C-------CCHHHH-----------HHHHHHHHhccc--cCcEEEEEe
Q 039591 198 -EKLGEYDCIFLAALV-G-------MSKEEK-----------MKIIRHIRKYMK--DGGILLVRS 240 (284)
Q Consensus 198 -~~l~~fD~V~~~~~~-~-------~~~~~k-----------~~~l~~~~~~L~--pGG~lv~~~ 240 (284)
...++.|+++.++.. . ...++. ..+.+.+.+.|+ .+|.++..+
T Consensus 86 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~is 150 (281)
T 3svt_A 86 TAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGIS 150 (281)
T ss_dssp HHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEe
Confidence 112578999988764 1 111211 234455666663 467777665
No 469
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=95.15 E-value=0.078 Score=47.71 Aligned_cols=101 Identities=18% Similarity=0.178 Sum_probs=63.4
Q ss_pred CCCeEEEecCCCChHHHHH-HHhhcCCCc-EEEEEeCCHHHHHHHHHHHh----hccCCCCCeEEEEcchhhhhccCCCc
Q 039591 130 QPKKVAFVGSGPMPLTSIV-MAKNHLKAT-HFDNFDIDEAANNVARRIVA----TDFEFEKRMKFLTGDILQVKEKLGEY 203 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~ai~-la~~~~~~~-~V~~vDis~~~~~~A~~~~~----~~~~l~~~v~~~~~D~~~~~~~l~~f 203 (284)
...+|..||+|..|..... ++. .|. .|+.+|++++.++....... ... ...++++. .|. ..+...
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~---~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~-~~~~i~~t-~d~----~al~~a 83 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQ---KDLGDVYMFDIIEGVPQGKALDLNHCMALIG-SPAKIFGE-NNY----EYLQNS 83 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH---TTCCEEEEECSSTTHHHHHHHHHHHHHHHHT-CCCCEEEE-SCG----GGGTTC
T ss_pred CCCEEEEECCCHHHHHHHHHHHh---CCCCeEEEEECCHHHHHHHHHHHHhHhhccC-CCCEEEEC-CCH----HHHCCC
Confidence 3469999999988876444 343 444 79999999988875322111 111 12345542 454 234689
Q ss_pred cEEEEcCcCC----CC--------HHHHHHHHHHHHhccccCcEEEEEe
Q 039591 204 DCIFLAALVG----MS--------KEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 204 D~V~~~~~~~----~~--------~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
|+|+.+.... +. .+-+.++++.+.++. |++.+++.+
T Consensus 84 D~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~t 131 (328)
T 2hjr_A 84 DVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYC-PNAFVICIT 131 (328)
T ss_dssp SEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECC
T ss_pred CEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHC-CCeEEEEec
Confidence 9999987432 11 133677788888775 889876543
No 470
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=95.14 E-value=0.25 Score=44.39 Aligned_cols=106 Identities=18% Similarity=0.137 Sum_probs=62.8
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHH-HHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANN-VARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIF 207 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~-~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~ 207 (284)
+.+.+|..+|+|..|.+............+++.+|++++.++ .+..+..... +...+++..+|.. ++...|+|+
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~-~~~~~~i~~~~~~----a~~~aDiVv 81 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALP-FTSPKKIYSAEYS----DAKDADLVV 81 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGG-GSCCCEEEECCGG----GGTTCSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhh-hcCCcEEEECcHH----HhcCCCEEE
Confidence 567899999999888876543321222248999999988655 3333332212 1135666655533 347899999
Q ss_pred EcCcCC----CCHHH--------HHHHHHHHHhccccCcEEEEEe
Q 039591 208 LAALVG----MSKEE--------KMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 208 ~~~~~~----~~~~~--------k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+.+... +...+ -..+.+.+.+ ..|++++++.+
T Consensus 82 i~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~-~~p~a~ilvvt 125 (326)
T 3vku_A 82 ITAGAPQKPGETRLDLVNKNLKILKSIVDPIVD-SGFNGIFLVAA 125 (326)
T ss_dssp ECCCCC----------------CHHHHHHHHHT-TTCCSEEEECS
T ss_pred ECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHh-cCCceEEEEcc
Confidence 987652 22111 1344445554 36889888755
No 471
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=95.13 E-value=0.12 Score=46.14 Aligned_cols=92 Identities=13% Similarity=0.164 Sum_probs=62.0
Q ss_pred CCCeEEEecCCCChHHHH-HHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 130 QPKKVAFVGSGPMPLTSI-VMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~ai-~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
...+|.+||+|.+|.... .|++ .|.+|+++|.+++.++...+. | +.+ ..+..+.. ...|+|++
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~---~G~~V~~~dr~~~~~~~l~~~----g-----~~~-~~~~~e~~---~~aDvVi~ 93 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCE---AGYALQVWNRTPARAASLAAL----G-----ATI-HEQARAAA---RDADIVVS 93 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHH---TTCEEEEECSCHHHHHHHHTT----T-----CEE-ESSHHHHH---TTCSEEEE
T ss_pred CCCEEEEECccHHHHHHHHHHHh---CCCeEEEEcCCHHHHHHHHHC----C-----CEe-eCCHHHHH---hcCCEEEE
Confidence 456999999999997543 3554 578999999999977654332 2 332 34544332 56899999
Q ss_pred cCcCCCCHHHHHHHHH--HHHhccccCcEEEEEe
Q 039591 209 AALVGMSKEEKMKIIR--HIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~~~~~~~k~~~l~--~~~~~L~pGG~lv~~~ 240 (284)
+... ...-..++. .+.+.+++|.+++..+
T Consensus 94 ~vp~---~~~~~~v~~~~~~~~~l~~~~~vi~~s 124 (320)
T 4dll_A 94 MLEN---GAVVQDVLFAQGVAAAMKPGSLFLDMA 124 (320)
T ss_dssp CCSS---HHHHHHHHTTTCHHHHCCTTCEEEECS
T ss_pred ECCC---HHHHHHHHcchhHHhhCCCCCEEEecC
Confidence 8754 233345555 6677889988877655
No 472
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=95.13 E-value=0.05 Score=48.48 Aligned_cols=99 Identities=13% Similarity=0.145 Sum_probs=58.8
Q ss_pred CeEEEecCCCChHHHH-HHHhhcCCCcEEEEEeCCHHHHHHHHHH-HhhccCCCCCeEEE----EcchhhhhccC-CCcc
Q 039591 132 KKVAFVGSGPMPLTSI-VMAKNHLKATHFDNFDIDEAANNVARRI-VATDFEFEKRMKFL----TGDILQVKEKL-GEYD 204 (284)
Q Consensus 132 ~~VL~iGsGp~G~~ai-~la~~~~~~~~V~~vDis~~~~~~A~~~-~~~~~~l~~~v~~~----~~D~~~~~~~l-~~fD 204 (284)
.+|+.||+|.+|..-. .|++ .|..|+.++.++. +..++. +...+......++. ..|.. +. +.+|
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~---~g~~V~~~~r~~~--~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~----~~~~~~D 73 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAK---TGHCVSVVSRSDY--ETVKAKGIRIRSATLGDYTFRPAAVVRSAA----ELETKPD 73 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHH---TTCEEEEECSTTH--HHHHHHCEEEEETTTCCEEECCSCEESCGG----GCSSCCS
T ss_pred CEEEEECcCHHHHHHHHHHHh---CCCeEEEEeCChH--HHHHhCCcEEeecCCCcEEEeeeeeECCHH----HcCCCCC
Confidence 5899999998876533 3454 5789999999872 333332 00000001122321 12222 23 4799
Q ss_pred EEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEeccch
Q 039591 205 CIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRSAKGA 244 (284)
Q Consensus 205 ~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~~~g~ 244 (284)
+|+++...... ..+++.+...++++..++.-. +|+
T Consensus 74 lVilavK~~~~----~~~l~~l~~~l~~~t~Iv~~~-nGi 108 (320)
T 3i83_A 74 CTLLCIKVVEG----ADRVGLLRDAVAPDTGIVLIS-NGI 108 (320)
T ss_dssp EEEECCCCCTT----CCHHHHHTTSCCTTCEEEEEC-SSS
T ss_pred EEEEecCCCCh----HHHHHHHHhhcCCCCEEEEeC-CCC
Confidence 99998755333 467888999999998766433 443
No 473
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=95.12 E-value=0.1 Score=44.89 Aligned_cols=107 Identities=15% Similarity=0.190 Sum_probs=66.8
Q ss_pred CCCCeEEEecCCCChHHHHHHHhh-cCCCcEEEEEeCCH---HHHHHHHHHHhhccCCCCCeEEEEcchhhhh-------
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKN-HLKATHFDNFDIDE---AANNVARRIVATDFEFEKRMKFLTGDILQVK------- 197 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~-~~~~~~V~~vDis~---~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~------- 197 (284)
-.++++|..|++ .|+-. .++++ ...|++|+.++.+. +.++...+.+... +.++.++..|+.+..
T Consensus 9 l~~k~vlVTGas-~GIG~-aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~ 83 (262)
T 3ksu_A 9 LKNKVIVIAGGI-KNLGA-LTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ---GAKVALYQSDLSNEEEVAKLFD 83 (262)
T ss_dssp CTTCEEEEETCS-SHHHH-HHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTT---TCEEEEEECCCCSHHHHHHHHH
T ss_pred CCCCEEEEECCC-chHHH-HHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhc---CCcEEEEECCCCCHHHHHHHHH
Confidence 356789999988 77643 23321 23688999987654 4444444333332 367899999987632
Q ss_pred ---ccCCCccEEEEcCcCCC-------CHHHH-----------HHHHHHHHhccccCcEEEEEe
Q 039591 198 ---EKLGEYDCIFLAALVGM-------SKEEK-----------MKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 198 ---~~l~~fD~V~~~~~~~~-------~~~~k-----------~~~l~~~~~~L~pGG~lv~~~ 240 (284)
...++.|+++.++.... ..++. ..+.+.+.+.|+++|.++..+
T Consensus 84 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~is 147 (262)
T 3ksu_A 84 FAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIA 147 (262)
T ss_dssp HHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEC
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEe
Confidence 11268999998876421 22221 345566777888888888765
No 474
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=95.10 E-value=0.033 Score=49.85 Aligned_cols=92 Identities=10% Similarity=0.113 Sum_probs=57.4
Q ss_pred CCeEEEecCCCChHHHH-HHHhhcCCC-cEEEEEeCCHHHHHHHHH---HHhhccCCCCCeEEEEc-chhhhhccCCCcc
Q 039591 131 PKKVAFVGSGPMPLTSI-VMAKNHLKA-THFDNFDIDEAANNVARR---IVATDFEFEKRMKFLTG-DILQVKEKLGEYD 204 (284)
Q Consensus 131 ~~~VL~iGsGp~G~~ai-~la~~~~~~-~~V~~vDis~~~~~~A~~---~~~~~~~l~~~v~~~~~-D~~~~~~~l~~fD 204 (284)
..+|.+||+|-+|.... .|++ .| .+|+++|++++..+.+++ .+...| + .. +..+. ....|
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~---~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g-----~---~~~s~~e~---~~~aD 89 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGG---RNAARLAAYDLRFNDPAASGALRARAAELG-----V---EPLDDVAG---IACAD 89 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT---TTCSEEEEECGGGGCTTTHHHHHHHHHHTT-----C---EEESSGGG---GGGCS
T ss_pred CCeEEEECccHHHHHHHHHHHH---cCCCeEEEEeCCCccccchHHHHHHHHHCC-----C---CCCCHHHH---HhcCC
Confidence 36899999998886533 3443 56 799999999832211111 112212 2 23 43332 24689
Q ss_pred EEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 205 CIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 205 ~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+||++.... ...+.++.+.+.++||.+++-.+
T Consensus 90 vVi~avp~~----~~~~~~~~i~~~l~~~~ivv~~s 121 (317)
T 4ezb_A 90 VVLSLVVGA----ATKAVAASAAPHLSDEAVFIDLN 121 (317)
T ss_dssp EEEECCCGG----GHHHHHHHHGGGCCTTCEEEECC
T ss_pred EEEEecCCH----HHHHHHHHHHhhcCCCCEEEECC
Confidence 999987542 22445688889999998877554
No 475
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=95.10 E-value=0.32 Score=41.87 Aligned_cols=106 Identities=16% Similarity=0.163 Sum_probs=69.8
Q ss_pred CCCCeEEEecCCCChHHH---HHHHhhcCCCcEEEEEeC-CHHHHHHHHHHHhhccCCCCCeEEEEcchhhhh-------
Q 039591 129 VQPKKVAFVGSGPMPLTS---IVMAKNHLKATHFDNFDI-DEAANNVARRIVATDFEFEKRMKFLTGDILQVK------- 197 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~a---i~la~~~~~~~~V~~vDi-s~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~------- 197 (284)
-.++++|..|++ .|+-. ..|++ .|++|+.++. +++..+...+.++..+ .++.++..|+.+..
T Consensus 16 l~~k~~lVTGas-~gIG~aia~~l~~---~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~ 88 (270)
T 3is3_A 16 LDGKVALVTGSG-RGIGAAVAVHLGR---LGAKVVVNYANSTKDAEKVVSEIKALG---SDAIAIKADIRQVPEIVKLFD 88 (270)
T ss_dssp CTTCEEEESCTT-SHHHHHHHHHHHH---TTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTTSHHHHHHHHH
T ss_pred cCCCEEEEECCC-chHHHHHHHHHHH---CCCEEEEEcCCCHHHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHH
Confidence 356789999988 77643 23444 6889988775 4555655555555433 67899999987632
Q ss_pred ---ccCCCccEEEEcCcCCC-------CHHHH-----------HHHHHHHHhccccCcEEEEEec
Q 039591 198 ---EKLGEYDCIFLAALVGM-------SKEEK-----------MKIIRHIRKYMKDGGILLVRSA 241 (284)
Q Consensus 198 ---~~l~~fD~V~~~~~~~~-------~~~~k-----------~~~l~~~~~~L~pGG~lv~~~~ 241 (284)
...++.|+++.++.... ..++. ..+.+.+.+.|+++|.++..+.
T Consensus 89 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 89 QAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp HHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 11257899998876521 22221 3455677888988999887763
No 476
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=95.08 E-value=0.039 Score=51.65 Aligned_cols=89 Identities=11% Similarity=-0.017 Sum_probs=61.1
Q ss_pred CCCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 129 VQPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
..+++|..+|.|++|......++ ..|.+|+++|+++.....|... | +++ .++.+. +...|+|+.
T Consensus 209 L~GktVgIiG~G~IG~~vA~~Lk--a~Ga~Viv~D~~p~~a~~A~~~----G-----~~~--~sL~ea---l~~ADVVil 272 (436)
T 3h9u_A 209 IAGKTACVCGYGDVGKGCAAALR--GFGARVVVTEVDPINALQAAME----G-----YQV--LLVEDV---VEEAHIFVT 272 (436)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHH--HTTCEEEEECSCHHHHHHHHHT----T-----CEE--CCHHHH---TTTCSEEEE
T ss_pred ccCCEEEEEeeCHHHHHHHHHHH--HCCCEEEEECCChhhhHHHHHh----C-----Cee--cCHHHH---HhhCCEEEE
Confidence 56899999999999988877776 2578999999999776655432 2 222 244432 367999998
Q ss_pred cCcC-CCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 209 AALV-GMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~-~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
.... +.. =++..+.||||++|+-.+
T Consensus 273 t~gt~~iI-------~~e~l~~MK~gAIVINvg 298 (436)
T 3h9u_A 273 TTGNDDII-------TSEHFPRMRDDAIVCNIG 298 (436)
T ss_dssp CSSCSCSB-------CTTTGGGCCTTEEEEECS
T ss_pred CCCCcCcc-------CHHHHhhcCCCcEEEEeC
Confidence 6543 111 124567899998777543
No 477
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=95.07 E-value=0.16 Score=43.83 Aligned_cols=105 Identities=14% Similarity=0.162 Sum_probs=67.9
Q ss_pred CCCCeEEEecCCCChHHH---HHHHhhcCCCcEEEEEeCC------------HHHHHHHHHHHhhccCCCCCeEEEEcch
Q 039591 129 VQPKKVAFVGSGPMPLTS---IVMAKNHLKATHFDNFDID------------EAANNVARRIVATDFEFEKRMKFLTGDI 193 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~a---i~la~~~~~~~~V~~vDis------------~~~~~~A~~~~~~~~~l~~~v~~~~~D~ 193 (284)
-.++++|..|++ .|+-. ..|++ .|++|+.+|.+ ++.++...+.....+ .++.++.+|+
T Consensus 11 l~gk~vlVTGas-~gIG~~ia~~l~~---~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~ 83 (278)
T 3sx2_A 11 LTGKVAFITGAA-RGQGRAHAVRLAA---DGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG---SRIVARQADV 83 (278)
T ss_dssp TTTCEEEEESTT-SHHHHHHHHHHHH---TTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT---CCEEEEECCT
T ss_pred CCCCEEEEECCC-ChHHHHHHHHHHH---CCCeEEEEecccccccccccccchHHHHHHHHHHHhcC---CeEEEEeCCC
Confidence 356789999987 66543 23444 68999999987 677766666555533 6799999998
Q ss_pred hhhh----------ccCCCccEEEEcCcCCC---CHHHH-----------HHHHHHHHhcccc---CcEEEEEe
Q 039591 194 LQVK----------EKLGEYDCIFLAALVGM---SKEEK-----------MKIIRHIRKYMKD---GGILLVRS 240 (284)
Q Consensus 194 ~~~~----------~~l~~fD~V~~~~~~~~---~~~~k-----------~~~l~~~~~~L~p---GG~lv~~~ 240 (284)
.+.. ...++.|+++.++.... ..++. ..+.+.+.+.|+. +|.++..+
T Consensus 84 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~is 157 (278)
T 3sx2_A 84 RDRESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLIS 157 (278)
T ss_dssp TCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEc
Confidence 7632 11258999999876532 11221 2344555565643 67777665
No 478
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=95.06 E-value=0.064 Score=53.47 Aligned_cols=101 Identities=19% Similarity=0.189 Sum_probs=67.4
Q ss_pred CCCeEEEecCCCChHH-HHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhh-------ccCCC--------CCeEEEEcch
Q 039591 130 QPKKVAFVGSGPMPLT-SIVMAKNHLKATHFDNFDIDEAANNVARRIVAT-------DFEFE--------KRMKFLTGDI 193 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~-ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~-------~~~l~--------~~v~~~~~D~ 193 (284)
+-++|.+||+|.+|.. +..+++ .|..|+.+|++++.++.++..+.. .|.+. .++++ ..|.
T Consensus 313 ~i~kV~VIGaG~MG~~iA~~la~---aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~-~~d~ 388 (715)
T 1wdk_A 313 DVKQAAVLGAGIMGGGIAYQSAS---KGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRP-TLSY 388 (715)
T ss_dssp CCSSEEEECCHHHHHHHHHHHHH---TTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEE-ESSS
T ss_pred cCCEEEEECCChhhHHHHHHHHh---CCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEE-ECCH
Confidence 3467999999987865 334555 578999999999998876543221 01110 12443 2333
Q ss_pred hhhhccCCCccEEEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 194 LQVKEKLGEYDCIFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 194 ~~~~~~l~~fD~V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+ .+...|+||.+... ...-|..++.++.+.++|+.+++..+
T Consensus 389 -~---~~~~aDlVIeaV~e--~~~vk~~v~~~l~~~~~~~~Ilasnt 429 (715)
T 1wdk_A 389 -G---DFGNVDLVVEAVVE--NPKVKQAVLAEVENHVREDAILASNT 429 (715)
T ss_dssp -T---TGGGCSEEEECCCS--CHHHHHHHHHHHHTTSCTTCEEEECC
T ss_pred -H---HHCCCCEEEEcCCC--CHHHHHHHHHHHHhhCCCCeEEEeCC
Confidence 2 23578999998654 34557889999999999998776433
No 479
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=95.05 E-value=0.27 Score=42.06 Aligned_cols=77 Identities=10% Similarity=0.038 Sum_probs=55.3
Q ss_pred CCCCeEEEecCCCChHHHH---HHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhc-------
Q 039591 129 VQPKKVAFVGSGPMPLTSI---VMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKE------- 198 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~ai---~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~------- 198 (284)
..+++||..|++ .|+-.. .|++ .|++|+.++.+++.++...+.+...+ .++.++..|+.+...
T Consensus 27 l~~k~vlITGas-~gIG~~la~~l~~---~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~ 99 (262)
T 3rkr_A 27 LSGQVAVVTGAS-RGIGAAIARKLGS---LGARVVLTARDVEKLRAVEREIVAAG---GEAESHACDLSHSDAIAAFATG 99 (262)
T ss_dssp TTTCEEEESSTT-SHHHHHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHHTT---CEEEEEECCTTCHHHHHHHHHH
T ss_pred cCCCEEEEECCC-ChHHHHHHHHHHH---CCCEEEEEECCHHHHHHHHHHHHHhC---CceeEEEecCCCHHHHHHHHHH
Confidence 356789999987 665422 2443 68899999999998887776665533 578999999876321
Q ss_pred ---cCCCccEEEEcCcC
Q 039591 199 ---KLGEYDCIFLAALV 212 (284)
Q Consensus 199 ---~l~~fD~V~~~~~~ 212 (284)
..++.|+++.++..
T Consensus 100 ~~~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 100 VLAAHGRCDVLVNNAGV 116 (262)
T ss_dssp HHHHHSCCSEEEECCCC
T ss_pred HHHhcCCCCEEEECCCc
Confidence 12579999988765
No 480
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=95.04 E-value=0.25 Score=42.65 Aligned_cols=76 Identities=11% Similarity=-0.023 Sum_probs=54.7
Q ss_pred CCCeEEEecCCCChHHH---HHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhh---------
Q 039591 130 QPKKVAFVGSGPMPLTS---IVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVK--------- 197 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~a---i~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~--------- 197 (284)
.++++|..|++ .|+-. ..|++ .|++|+.++.+++.++...+.+...+ .++.++..|+.+..
T Consensus 3 ~~k~~lVTGas-~GIG~aia~~la~---~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~d~~~v~~~~~~~ 75 (264)
T 3tfo_A 3 MDKVILITGAS-GGIGEGIARELGV---AGAKILLGARRQARIEAIATEIRDAG---GTALAQVLDVTDRHSVAAFAQAA 75 (264)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHH---TTCEEEEEESSHHHHHHHHHHHHHTT---CEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCc-cHHHHHHHHHHHH---CCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEcCCCCHHHHHHHHHHH
Confidence 35789999987 66543 23444 68999999999998887776665533 57888899987632
Q ss_pred -ccCCCccEEEEcCcC
Q 039591 198 -EKLGEYDCIFLAALV 212 (284)
Q Consensus 198 -~~l~~fD~V~~~~~~ 212 (284)
...++.|+++.++..
T Consensus 76 ~~~~g~iD~lVnnAG~ 91 (264)
T 3tfo_A 76 VDTWGRIDVLVNNAGV 91 (264)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 112689999988765
No 481
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=94.99 E-value=0.097 Score=49.86 Aligned_cols=97 Identities=13% Similarity=0.108 Sum_probs=65.9
Q ss_pred CCeEEEecCCCChHHH-HHHHhhcCCCcEEEEEeCCHHHHHHHHH-HHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 131 PKKVAFVGSGPMPLTS-IVMAKNHLKATHFDNFDIDEAANNVARR-IVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 131 ~~~VL~iGsGp~G~~a-i~la~~~~~~~~V~~vDis~~~~~~A~~-~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
..+|.+||+|.+|..- ..|++ .|.+|+++|.+++.++...+ ... + ..+.. ..|..+....++..|+|++
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~---~G~~V~v~dr~~~~~~~l~~~~~~--~---~gi~~-~~s~~e~v~~l~~aDvVil 80 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAAD---HGFTVCAYNRTQSKVDHFLANEAK--G---KSIIG-ATSIEDFISKLKRPRKVML 80 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH---TTCCEEEECSSSHHHHHHHHTTTT--T---SSEEC-CSSHHHHHHTSCSSCEEEE
T ss_pred CCCEEEEeeHHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHccccc--C---CCeEE-eCCHHHHHhcCCCCCEEEE
Confidence 4689999999888653 34555 57899999999998876655 211 0 22332 3455554444456999999
Q ss_pred cCcCCCCHHHHHHHHHHHHhccccCcEEEEE
Q 039591 209 AALVGMSKEEKMKIIRHIRKYMKDGGILLVR 239 (284)
Q Consensus 209 ~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~ 239 (284)
+...+ ..-..+++.+...|+||.+|+-.
T Consensus 81 ~Vp~~---~~v~~vl~~l~~~l~~g~iIId~ 108 (497)
T 2p4q_A 81 LVKAG---APVDALINQIVPLLEKGDIIIDG 108 (497)
T ss_dssp CCCSS---HHHHHHHHHHGGGCCTTCEEEEC
T ss_pred EcCCh---HHHHHHHHHHHHhCCCCCEEEEC
Confidence 87542 23467788899999998876643
No 482
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=94.97 E-value=0.11 Score=49.17 Aligned_cols=96 Identities=15% Similarity=0.177 Sum_probs=64.8
Q ss_pred CCeEEEecCCCChHHH-HHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEEc
Q 039591 131 PKKVAFVGSGPMPLTS-IVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFLA 209 (284)
Q Consensus 131 ~~~VL~iGsGp~G~~a-i~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~~ 209 (284)
.++|.+||+|.+|..- ..|++ .|.+|+++|.+++.++...+... + ..+.. ..|..+....++..|+|+++
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~---~G~~V~v~~r~~~~~~~l~~~~~--~---~gi~~-~~s~~e~v~~l~~aDvVil~ 85 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIES---RGYTVSIFNRSREKTEEVIAENP--G---KKLVP-YYTVKEFVESLETPRRILLM 85 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHT---TTCCEEEECSSHHHHHHHHHHST--T---SCEEE-CSSHHHHHHTBCSSCEEEEC
T ss_pred CCeEEEEccHHHHHHHHHHHHh---CCCeEEEEeCCHHHHHHHHhhCC--C---CCeEE-eCCHHHHHhCCCCCCEEEEE
Confidence 3579999999888653 23444 57789999999998876654321 1 23432 34555544444569999998
Q ss_pred CcCCCCHHHHHHHHHHHHhccccCcEEEE
Q 039591 210 ALVGMSKEEKMKIIRHIRKYMKDGGILLV 238 (284)
Q Consensus 210 ~~~~~~~~~k~~~l~~~~~~L~pGG~lv~ 238 (284)
...+ ..-..+++.+...|+||.+++-
T Consensus 86 Vp~~---~~v~~vl~~l~~~l~~g~iIId 111 (480)
T 2zyd_A 86 VKAG---AGTDAAIDSLKPYLDKGDIIID 111 (480)
T ss_dssp SCSS---SHHHHHHHHHGGGCCTTCEEEE
T ss_pred CCCH---HHHHHHHHHHHhhcCCCCEEEE
Confidence 7552 2336788889999998886663
No 483
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=94.95 E-value=0.15 Score=44.16 Aligned_cols=76 Identities=17% Similarity=0.101 Sum_probs=58.1
Q ss_pred CCCeEEEecCCCChHH---HHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhh---------
Q 039591 130 QPKKVAFVGSGPMPLT---SIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVK--------- 197 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~---ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~--------- 197 (284)
.++.+|.-|++ .|+- +..|++ .|++|+.+|++++.++...+.++..+ .++.++.+|+.+..
T Consensus 6 ~gKvalVTGas-~GIG~aiA~~la~---~Ga~Vv~~~~~~~~~~~~~~~i~~~g---~~~~~~~~Dvt~~~~v~~~~~~~ 78 (254)
T 4fn4_A 6 KNKVVIVTGAG-SGIGRAIAKKFAL---NDSIVVAVELLEDRLNQIVQELRGMG---KEVLGVKADVSKKKDVEEFVRRT 78 (254)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHH---cCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEccCCCHHHHHHHHHHH
Confidence 57888999988 7874 334555 78999999999999988877776644 67899999987632
Q ss_pred -ccCCCccEEEEcCcC
Q 039591 198 -EKLGEYDCIFLAALV 212 (284)
Q Consensus 198 -~~l~~fD~V~~~~~~ 212 (284)
..+++.|+++.++..
T Consensus 79 ~~~~G~iDiLVNNAGi 94 (254)
T 4fn4_A 79 FETYSRIDVLCNNAGI 94 (254)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCcc
Confidence 123789999988754
No 484
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=94.93 E-value=0.11 Score=48.98 Aligned_cols=97 Identities=10% Similarity=0.047 Sum_probs=65.1
Q ss_pred CCCeEEEecCCCChHHHHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhh----ccCCCccE
Q 039591 130 QPKKVAFVGSGPMPLTSIVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVK----EKLGEYDC 205 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~----~~l~~fD~ 205 (284)
..++|+.+|+|..|.+...... ..|..|+.+|.|+++++.+++.+ .+..++||+.+.. ...+..|+
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~--~~~~~v~vId~d~~~~~~~~~~~--------~~~~i~Gd~~~~~~L~~Agi~~ad~ 71 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLV--GENNDITIVDKDGDRLRELQDKY--------DLRVVNGHASHPDVLHEAGAQDADM 71 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTC--STTEEEEEEESCHHHHHHHHHHS--------SCEEEESCTTCHHHHHHHTTTTCSE
T ss_pred CcCEEEEECCCHHHHHHHHHHH--HCCCCEEEEECCHHHHHHHHHhc--------CcEEEEEcCCCHHHHHhcCCCcCCE
Confidence 4578999999987765433322 25788999999999998765432 3567899987632 12378999
Q ss_pred EEEcCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 206 IFLAALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 206 V~~~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
++..... ++..-+...+++.+.+.-.++.|-
T Consensus 72 ~ia~t~~----De~Nl~~~~~Ak~~~~~~~~iar~ 102 (461)
T 4g65_A 72 LVAVTNT----DETNMAACQVAFTLFNTPNRIARI 102 (461)
T ss_dssp EEECCSC----HHHHHHHHHHHHHHHCCSSEEEEC
T ss_pred EEEEcCC----hHHHHHHHHHHHHhcCCccceeEe
Confidence 8865443 333445556667776666666654
No 485
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=94.93 E-value=0.22 Score=42.52 Aligned_cols=105 Identities=12% Similarity=0.129 Sum_probs=69.3
Q ss_pred CCCCeEEEecCCCChHHH---HHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhh--------
Q 039591 129 VQPKKVAFVGSGPMPLTS---IVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVK-------- 197 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~a---i~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~-------- 197 (284)
-.++++|..|++ .|+-. ..|++ .|++|+.+|.+++..+...+.+...+ .++.++..|+.+..
T Consensus 10 l~~k~vlVTGas-~gIG~~ia~~l~~---~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~ 82 (256)
T 3gaf_A 10 LNDAVAIVTGAA-AGIGRAIAGTFAK---AGASVVVTDLKSEGAEAVAAAIRQAG---GKAIGLECNVTDEQHREAVIKA 82 (256)
T ss_dssp CTTCEEEECSCS-SHHHHHHHHHHHH---HTCEEEEEESSHHHHHHHHHHHHHTT---CCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCC-CHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEECCCCCHHHHHHHHHH
Confidence 356789999988 67643 23444 58899999999998887776665533 67899999987632
Q ss_pred --ccCCCccEEEEcCcCCC------CHHHH-----------HHHHHHHHhcccc--CcEEEEEe
Q 039591 198 --EKLGEYDCIFLAALVGM------SKEEK-----------MKIIRHIRKYMKD--GGILLVRS 240 (284)
Q Consensus 198 --~~l~~fD~V~~~~~~~~------~~~~k-----------~~~l~~~~~~L~p--GG~lv~~~ 240 (284)
...++.|+++.++.... ..++. ..+.+.+.+.|+. +|.++..+
T Consensus 83 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~is 146 (256)
T 3gaf_A 83 ALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNIS 146 (256)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEc
Confidence 11258999998876521 22222 2344555555543 57777665
No 486
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=94.90 E-value=0.05 Score=46.96 Aligned_cols=91 Identities=12% Similarity=0.069 Sum_probs=54.3
Q ss_pred CCeEEEecCCCChHHHHH-HHhhcCCC-cEEEEEeCCH-------------------HHHHHHHHHHhhccCCCCCeEEE
Q 039591 131 PKKVAFVGSGPMPLTSIV-MAKNHLKA-THFDNFDIDE-------------------AANNVARRIVATDFEFEKRMKFL 189 (284)
Q Consensus 131 ~~~VL~iGsGp~G~~ai~-la~~~~~~-~~V~~vDis~-------------------~~~~~A~~~~~~~~~l~~~v~~~ 189 (284)
+.+|+.+|+|.+|..... |++ .| .+++.+|.|. ..++.+.+.+...+ ..-+++.+
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~---~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~n-p~~~v~~~ 106 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLAS---AGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRIN-PHIAITPV 106 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHH---HTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHC-TTSEEEEE
T ss_pred CCeEEEEeeCHHHHHHHHHHHH---cCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHC-CCcEEEEE
Confidence 469999999977765443 554 34 5899999997 56666665555543 12345555
Q ss_pred Ecchhh--hhccCCCccEEEEcCcCCCCHHHHHHHHHHHHh
Q 039591 190 TGDILQ--VKEKLGEYDCIFLAALVGMSKEEKMKIIRHIRK 228 (284)
Q Consensus 190 ~~D~~~--~~~~l~~fD~V~~~~~~~~~~~~k~~~l~~~~~ 228 (284)
..++.+ ....+..||+|+.+... .+.+..+.+.+.+
T Consensus 107 ~~~~~~~~~~~~~~~~DvVi~~~d~---~~~~~~l~~~~~~ 144 (249)
T 1jw9_B 107 NALLDDAELAALIAEHDLVLDCTDN---VAVRNQLNAGCFA 144 (249)
T ss_dssp CSCCCHHHHHHHHHTSSEEEECCSS---HHHHHHHHHHHHH
T ss_pred eccCCHhHHHHHHhCCCEEEEeCCC---HHHHHHHHHHHHH
Confidence 544432 11123689999987643 2444444444443
No 487
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=94.90 E-value=0.086 Score=45.38 Aligned_cols=91 Identities=9% Similarity=0.146 Sum_probs=60.1
Q ss_pred CCeEEEecCCCChHHHH-HHHhhcCCCcE-EEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEE
Q 039591 131 PKKVAFVGSGPMPLTSI-VMAKNHLKATH-FDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFL 208 (284)
Q Consensus 131 ~~~VL~iGsGp~G~~ai-~la~~~~~~~~-V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~ 208 (284)
+.+|..||+|-+|..-. .+++ .|.+ |+.+|.+++.++...+.. + +.+ ..|..+ .+...|+|++
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~---~g~~~v~~~~~~~~~~~~~~~~~---g-----~~~-~~~~~~---~~~~~Dvvi~ 74 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYR---KGFRIVQVYSRTEESARELAQKV---E-----AEY-TTDLAE---VNPYAKLYIV 74 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHH---HTCCEEEEECSSHHHHHHHHHHT---T-----CEE-ESCGGG---SCSCCSEEEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHH---CCCeEEEEEeCCHHHHHHHHHHc---C-----Cce-eCCHHH---HhcCCCEEEE
Confidence 36899999997776533 2443 3566 899999998877654431 2 222 334433 2357999999
Q ss_pred cCcCCCCHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 209 AALVGMSKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 209 ~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+... ....++++.+.+.+++|.+++-.+
T Consensus 75 av~~----~~~~~v~~~l~~~~~~~~ivv~~s 102 (266)
T 3d1l_A 75 SLKD----SAFAELLQGIVEGKREEALMVHTA 102 (266)
T ss_dssp CCCH----HHHHHHHHHHHTTCCTTCEEEECC
T ss_pred ecCH----HHHHHHHHHHHhhcCCCcEEEECC
Confidence 8754 334678888888888887666443
No 488
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=94.87 E-value=0.095 Score=47.02 Aligned_cols=102 Identities=19% Similarity=0.204 Sum_probs=63.5
Q ss_pred CCCeEEEecCCCChHHHHHHHhhcCCCc-EEEEEeCCHHHHHHHHHHHhh----ccCCCCCeEEEEcchhhhhccCCCcc
Q 039591 130 QPKKVAFVGSGPMPLTSIVMAKNHLKAT-HFDNFDIDEAANNVARRIVAT----DFEFEKRMKFLTGDILQVKEKLGEYD 204 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~ai~la~~~~~~~-~V~~vDis~~~~~~A~~~~~~----~~~l~~~v~~~~~D~~~~~~~l~~fD 204 (284)
+..+|..||+|..|.+...+.. ..+. .|+.+|+++++++.....+.. .+ ...+++. +.|. ..+...|
T Consensus 3 ~~~kI~VIGaG~vG~~ia~~la--~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~-~~~~i~~-t~d~----~al~~aD 74 (322)
T 1t2d_A 3 PKAKIVLVGSGMIGGVMATLIV--QKNLGDVVLFDIVKNMPHGKALDTSHTNVMAY-SNCKVSG-SNTY----DDLAGAD 74 (322)
T ss_dssp CCCEEEEECCSHHHHHHHHHHH--HTTCCEEEEECSSSSHHHHHHHHHHTHHHHHT-CCCCEEE-ECCG----GGGTTCS
T ss_pred CCCEEEEECCCHHHHHHHHHHH--hCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcC-CCcEEEE-CCCH----HHhCCCC
Confidence 3468999999988887544333 1344 699999999887643332222 11 1233443 2454 2347899
Q ss_pred EEEEcCcC----CCC-------------HHHHHHHHHHHHhccccCcEEEEEe
Q 039591 205 CIFLAALV----GMS-------------KEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 205 ~V~~~~~~----~~~-------------~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+|+.+... ++. .+-+.++++.+.++. |++.+++.+
T Consensus 75 ~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~t 126 (322)
T 1t2d_A 75 VVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIVVT 126 (322)
T ss_dssp EEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECS
T ss_pred EEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEec
Confidence 99998743 211 124677888888775 899887644
No 489
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=94.87 E-value=0.068 Score=46.87 Aligned_cols=87 Identities=11% Similarity=0.082 Sum_probs=58.9
Q ss_pred CeEEEecCCCChHHHH-HHHhhcCCCc---EEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEE
Q 039591 132 KKVAFVGSGPMPLTSI-VMAKNHLKAT---HFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIF 207 (284)
Q Consensus 132 ~~VL~iGsGp~G~~ai-~la~~~~~~~---~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~ 207 (284)
.+|.+||+|-+|..-. .+++ .|. +|+.+|.+++.++..++. ++ +.+ ..|..+. ....|+|+
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~---~g~~~~~V~v~dr~~~~~~~l~~~---~g-----i~~-~~~~~~~---~~~aDvVi 68 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIA---NGYDPNRICVTNRSLDKLDFFKEK---CG-----VHT-TQDNRQG---ALNADVVV 68 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHH---TTCCGGGEEEECSSSHHHHHHHHT---TC-----CEE-ESCHHHH---HSSCSEEE
T ss_pred CEEEEEcccHHHHHHHHHHHH---CCCCCCeEEEEeCCHHHHHHHHHH---cC-----CEE-eCChHHH---HhcCCeEE
Confidence 6899999997776433 3444 334 899999999987665543 12 333 3344332 25789999
Q ss_pred EcCcCCCCHHHHHHHHHHHHhc-cccCcEEE
Q 039591 208 LAALVGMSKEEKMKIIRHIRKY-MKDGGILL 237 (284)
Q Consensus 208 ~~~~~~~~~~~k~~~l~~~~~~-L~pGG~lv 237 (284)
++... ....++++++... ++++.+++
T Consensus 69 lav~p----~~~~~vl~~l~~~~l~~~~iii 95 (280)
T 3tri_A 69 LAVKP----HQIKMVCEELKDILSETKILVI 95 (280)
T ss_dssp ECSCG----GGHHHHHHHHHHHHHTTTCEEE
T ss_pred EEeCH----HHHHHHHHHHHhhccCCCeEEE
Confidence 98743 4567889999888 87776555
No 490
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=94.83 E-value=0.23 Score=42.33 Aligned_cols=76 Identities=11% Similarity=-0.020 Sum_probs=55.4
Q ss_pred CCCeEEEecCCCChHHH---HHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhc------cC
Q 039591 130 QPKKVAFVGSGPMPLTS---IVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKE------KL 200 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~a---i~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~------~l 200 (284)
.++++|..|++ .|+-. ..|++ .|++|+.+|.+++.++...+.++..+ .++.++..|+.+... ..
T Consensus 6 ~~k~vlVTGas-~GIG~aia~~l~~---~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~ 78 (252)
T 3h7a_A 6 RNATVAVIGAG-DYIGAEIAKKFAA---EGFTVFAGRRNGEKLAPLVAEIEAAG---GRIVARSLDARNEDEVTAFLNAA 78 (252)
T ss_dssp CSCEEEEECCS-SHHHHHHHHHHHH---TTCEEEEEESSGGGGHHHHHHHHHTT---CEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEECcCCCHHHHHHHHHHH
Confidence 56789999988 77643 23444 68899999999998887777666533 578999999876321 11
Q ss_pred ---CCccEEEEcCcC
Q 039591 201 ---GEYDCIFLAALV 212 (284)
Q Consensus 201 ---~~fD~V~~~~~~ 212 (284)
++.|+++.++..
T Consensus 79 ~~~g~id~lv~nAg~ 93 (252)
T 3h7a_A 79 DAHAPLEVTIFNVGA 93 (252)
T ss_dssp HHHSCEEEEEECCCC
T ss_pred HhhCCceEEEECCCc
Confidence 578999988765
No 491
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=94.83 E-value=0.21 Score=42.82 Aligned_cols=104 Identities=14% Similarity=0.130 Sum_probs=69.4
Q ss_pred CCCeEEEecCCCChHHH---HHHHhhcCCCcEEEEE-eCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhh--------
Q 039591 130 QPKKVAFVGSGPMPLTS---IVMAKNHLKATHFDNF-DIDEAANNVARRIVATDFEFEKRMKFLTGDILQVK-------- 197 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~a---i~la~~~~~~~~V~~v-Dis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~-------- 197 (284)
.++++|..|++ .|+-. ..|++ .|++|+.+ +.+++..+.+.+.++..+ .++.++.+|+.+..
T Consensus 7 ~~k~vlVTGas-~GIG~aia~~la~---~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~ 79 (259)
T 3edm_A 7 TNRTIVVAGAG-RDIGRACAIRFAQ---EGANVVLTYNGAAEGAATAVAEIEKLG---RSALAIKADLTNAAEVEAAISA 79 (259)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH---TTCEEEEEECSSCHHHHHHHHHHHTTT---SCCEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHH---CCCEEEEEcCCCHHHHHHHHHHHHhcC---CceEEEEcCCCCHHHHHHHHHH
Confidence 56789999988 67642 23444 68888888 777777776666555533 57889999987632
Q ss_pred --ccCCCccEEEEcCcCC--------CCHHH-----------HHHHHHHHHhccccCcEEEEEe
Q 039591 198 --EKLGEYDCIFLAALVG--------MSKEE-----------KMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 198 --~~l~~fD~V~~~~~~~--------~~~~~-----------k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
...++.|+++.++... ...++ ...+.+.+.+.|+++|.++..+
T Consensus 80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 143 (259)
T 3edm_A 80 AADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFS 143 (259)
T ss_dssp HHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred HHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEc
Confidence 1125899999877432 11122 1345667778888888888766
No 492
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=94.83 E-value=0.1 Score=49.19 Aligned_cols=102 Identities=20% Similarity=0.216 Sum_probs=64.1
Q ss_pred CeEEEecCCCChHHH-HHHHhhcCCCcEEEEEeCCHHHHHHHHH------------HHhhccCCCCCeEEEEcchhhhhc
Q 039591 132 KKVAFVGSGPMPLTS-IVMAKNHLKATHFDNFDIDEAANNVARR------------IVATDFEFEKRMKFLTGDILQVKE 198 (284)
Q Consensus 132 ~~VL~iGsGp~G~~a-i~la~~~~~~~~V~~vDis~~~~~~A~~------------~~~~~~~l~~~v~~~~~D~~~~~~ 198 (284)
.+|..||+|-+|... ..|++ ..+|.+|+++|++++.++..++ .+.. + ...++++ ..|..+.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~-~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~-~-~~~~~~~-t~~~~e~-- 79 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAH-MCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVES-C-RGKNLFF-STNIDDA-- 79 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHH-HCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHH-H-BTTTEEE-ESCHHHH--
T ss_pred cEEEEECCCHHHHHHHHHHHh-cCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHH-h-hcCCEEE-ECCHHHH--
Confidence 589999999999864 44665 2337899999999998876532 1111 0 0123444 3444332
Q ss_pred cCCCccEEEEcCcCCCC-----------HHHHHHHHHHHHhccccCcEEEEEe
Q 039591 199 KLGEYDCIFLAALVGMS-----------KEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 199 ~l~~fD~V~~~~~~~~~-----------~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
+...|+||++...... ...-..+.+.+.+.+++|.+++..+
T Consensus 80 -~~~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~S 131 (467)
T 2q3e_A 80 -IKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKS 131 (467)
T ss_dssp -HHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECS
T ss_pred -HhcCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECC
Confidence 2468999998543111 0113567788888999988776654
No 493
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.81 E-value=0.12 Score=48.60 Aligned_cols=100 Identities=13% Similarity=0.166 Sum_probs=63.8
Q ss_pred CeEEEecCCCChHH-HHHHHhhcCCCcEEEEEeCCHHHHHHHHHH------------Hhh-ccCCCCCeEEEEcchhhhh
Q 039591 132 KKVAFVGSGPMPLT-SIVMAKNHLKATHFDNFDIDEAANNVARRI------------VAT-DFEFEKRMKFLTGDILQVK 197 (284)
Q Consensus 132 ~~VL~iGsGp~G~~-ai~la~~~~~~~~V~~vDis~~~~~~A~~~------------~~~-~~~l~~~v~~~~~D~~~~~ 197 (284)
.+|..||.|=.|+. +..+|+ .|.+|+|+|+|++.++.-++- +++ .. +.+++| +.|..+.
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~---~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~--~g~l~~-tt~~~~a- 94 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFAL---LGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALS--SGRLSF-AESAEEA- 94 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---HTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHH--TTCEEE-CSSHHHH-
T ss_pred CEEEEEccCHHHHHHHHHHHh---CCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHH--cCCeeE-EcCHHHH-
Confidence 58999999988875 556776 578999999999998875431 111 01 134555 3443322
Q ss_pred ccCCCccEEEEcCcCCC------CHHHHHHHHHHHHhcccc---CcEEEEEe
Q 039591 198 EKLGEYDCIFLAALVGM------SKEEKMKIIRHIRKYMKD---GGILLVRS 240 (284)
Q Consensus 198 ~~l~~fD~V~~~~~~~~------~~~~k~~~l~~~~~~L~p---GG~lv~~~ 240 (284)
+...|++|++-+... +...-....+.+.++|++ |.++++.+
T Consensus 95 --i~~ad~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eS 144 (444)
T 3vtf_A 95 --VAATDATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKS 144 (444)
T ss_dssp --HHTSSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECS
T ss_pred --HhcCCceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeC
Confidence 246799888753211 112346777888888885 44667666
No 494
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=94.80 E-value=0.37 Score=41.64 Aligned_cols=77 Identities=17% Similarity=0.178 Sum_probs=55.1
Q ss_pred CCCCeEEEecCCCChHHH---HHHHhhcCCCcEEEEEeC-------------CHHHHHHHHHHHhhccCCCCCeEEEEcc
Q 039591 129 VQPKKVAFVGSGPMPLTS---IVMAKNHLKATHFDNFDI-------------DEAANNVARRIVATDFEFEKRMKFLTGD 192 (284)
Q Consensus 129 ~~~~~VL~iGsGp~G~~a---i~la~~~~~~~~V~~vDi-------------s~~~~~~A~~~~~~~~~l~~~v~~~~~D 192 (284)
-.++++|..|++ .|+-. ..|++ .|++|+.+|. +++.++...+.....+ .++.++..|
T Consensus 13 l~gk~~lVTGas-~gIG~a~a~~la~---~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D 85 (280)
T 3pgx_A 13 LQGRVAFITGAA-RGQGRSHAVRLAA---EGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQG---RKALTRVLD 85 (280)
T ss_dssp TTTCEEEEESTT-SHHHHHHHHHHHH---TTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTT---CCEEEEECC
T ss_pred cCCCEEEEECCC-cHHHHHHHHHHHH---CCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC---CeEEEEEcC
Confidence 457889999988 67643 23444 6899999998 6777777766665533 678999999
Q ss_pred hhhhh----------ccCCCccEEEEcCcC
Q 039591 193 ILQVK----------EKLGEYDCIFLAALV 212 (284)
Q Consensus 193 ~~~~~----------~~l~~fD~V~~~~~~ 212 (284)
+.+.. ...++.|+++.++..
T Consensus 86 v~~~~~v~~~~~~~~~~~g~id~lvnnAg~ 115 (280)
T 3pgx_A 86 VRDDAALRELVADGMEQFGRLDVVVANAGV 115 (280)
T ss_dssp TTCHHHHHHHHHHHHHHHCCCCEEEECCCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 87632 112589999988765
No 495
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=94.78 E-value=0.055 Score=49.06 Aligned_cols=90 Identities=11% Similarity=0.112 Sum_probs=60.0
Q ss_pred CCeEEEecCCCChHHHH-HHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhcc-CCCccEEEE
Q 039591 131 PKKVAFVGSGPMPLTSI-VMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEK-LGEYDCIFL 208 (284)
Q Consensus 131 ~~~VL~iGsGp~G~~ai-~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~-l~~fD~V~~ 208 (284)
.++|.+||+|-+|.+-. .|.+ .|.+|+++|.+++.++.+++. | . . ...|..+.... ....|+|++
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~---~G~~V~~~dr~~~~~~~a~~~----G-~----~-~~~~~~e~~~~a~~~aDlVil 74 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHA---ANHSVFGYNRSRSGAKSAVDE----G-F----D-VSADLEATLQRAAAEDALIVL 74 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHH---TTCCEEEECSCHHHHHHHHHT----T-C----C-EESCHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEEeecHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHHc----C-C----e-eeCCHHHHHHhcccCCCEEEE
Confidence 46899999997776533 3443 568999999999988877543 3 1 1 13454433221 135799999
Q ss_pred cCcCCCCHHHHHHHHHHHHhccccCcEEEE
Q 039591 209 AALVGMSKEEKMKIIRHIRKYMKDGGILLV 238 (284)
Q Consensus 209 ~~~~~~~~~~k~~~l~~~~~~L~pGG~lv~ 238 (284)
+.+. .....+++++... +||.+++-
T Consensus 75 avP~----~~~~~vl~~l~~~-~~~~iv~D 99 (341)
T 3ktd_A 75 AVPM----TAIDSLLDAVHTH-APNNGFTD 99 (341)
T ss_dssp CSCH----HHHHHHHHHHHHH-CTTCCEEE
T ss_pred eCCH----HHHHHHHHHHHcc-CCCCEEEE
Confidence 9764 4556788888775 88866543
No 496
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=94.76 E-value=0.22 Score=42.89 Aligned_cols=79 Identities=14% Similarity=0.122 Sum_probs=51.3
Q ss_pred CCCeEEEecCCCChHHHH---HHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhh---------
Q 039591 130 QPKKVAFVGSGPMPLTSI---VMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVK--------- 197 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~ai---~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~--------- 197 (284)
.++++|..|++ .|+-.. .|++ .|++|+.++.+++.++...+.+........++.++.+|+.+..
T Consensus 5 ~~k~vlVTGas-~gIG~~ia~~l~~---~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (278)
T 1spx_A 5 AEKVAIITGSS-NGIGRATAVLFAR---EGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTT 80 (278)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHH
Confidence 45788999987 665432 2443 6889999999998877655544110111246888999987531
Q ss_pred -ccCCCccEEEEcCcC
Q 039591 198 -EKLGEYDCIFLAALV 212 (284)
Q Consensus 198 -~~l~~fD~V~~~~~~ 212 (284)
...++.|+++.++..
T Consensus 81 ~~~~g~id~lv~~Ag~ 96 (278)
T 1spx_A 81 LGKFGKLDILVNNAGA 96 (278)
T ss_dssp HHHHSCCCEEEECCC-
T ss_pred HHHcCCCCEEEECCCC
Confidence 112489999988764
No 497
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=94.74 E-value=0.39 Score=41.05 Aligned_cols=76 Identities=18% Similarity=0.185 Sum_probs=53.0
Q ss_pred CCCeEEEecCCCChHHHH---HHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhh---------
Q 039591 130 QPKKVAFVGSGPMPLTSI---VMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVK--------- 197 (284)
Q Consensus 130 ~~~~VL~iGsGp~G~~ai---~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~--------- 197 (284)
.++++|..|++ .|+-.. .|++ .|++|+.++.+++.++...+.+...+ .++.++..|+.+..
T Consensus 6 ~~k~vlVTGas-~gIG~~ia~~l~~---~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~ 78 (262)
T 1zem_A 6 NGKVCLVTGAG-GNIGLATALRLAE---EGTAIALLDMNREALEKAEASVREKG---VEARSYVCDVTSEEAVIGTVDSV 78 (262)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHHTTT---SCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEecCCCHHHHHHHHHHH
Confidence 46789999987 665432 2333 68899999999988776655554423 57888999987532
Q ss_pred -ccCCCccEEEEcCcC
Q 039591 198 -EKLGEYDCIFLAALV 212 (284)
Q Consensus 198 -~~l~~fD~V~~~~~~ 212 (284)
..+++.|+++.++..
T Consensus 79 ~~~~g~id~lv~nAg~ 94 (262)
T 1zem_A 79 VRDFGKIDFLFNNAGY 94 (262)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHhCCCCEEEECCCC
Confidence 112579999988754
No 498
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=94.73 E-value=0.12 Score=45.21 Aligned_cols=89 Identities=17% Similarity=0.079 Sum_probs=58.8
Q ss_pred CeEEEecCCCChHHHHH-HHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEEcC
Q 039591 132 KKVAFVGSGPMPLTSIV-MAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFLAA 210 (284)
Q Consensus 132 ~~VL~iGsGp~G~~ai~-la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~~~ 210 (284)
.+|..||+|.+|..... +++ .|.+|+.+|.+++..+..++. | +.+ ..|..+.. ...|+|+++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~---~g~~V~~~~~~~~~~~~~~~~----g-----~~~-~~~~~~~~---~~~D~vi~~v 69 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLK---AGYSLVVSDRNPEAIADVIAA----G-----AET-ASTAKAIA---EQCDVIITML 69 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHH---TTCEEEEECSCHHHHHHHHHT----T-----CEE-CSSHHHHH---HHCSEEEECC
T ss_pred ceEEEECchHHHHHHHHHHHh---CCCEEEEEeCCHHHHHHHHHC----C-----Cee-cCCHHHHH---hCCCEEEEEC
Confidence 48999999999976443 444 467899999999887765442 2 222 23443322 4589999987
Q ss_pred cCCCCHHHHHHHH---HHHHhccccCcEEEEE
Q 039591 211 LVGMSKEEKMKII---RHIRKYMKDGGILLVR 239 (284)
Q Consensus 211 ~~~~~~~~k~~~l---~~~~~~L~pGG~lv~~ 239 (284)
.. +.....++ +.+.+.++||.+++..
T Consensus 70 ~~---~~~~~~~~~~~~~l~~~l~~~~~vv~~ 98 (299)
T 1vpd_A 70 PN---SPHVKEVALGENGIIEGAKPGTVLIDM 98 (299)
T ss_dssp SS---HHHHHHHHHSTTCHHHHCCTTCEEEEC
T ss_pred CC---HHHHHHHHhCcchHhhcCCCCCEEEEC
Confidence 64 12334455 5667789999877643
No 499
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=94.73 E-value=0.2 Score=47.43 Aligned_cols=104 Identities=19% Similarity=0.199 Sum_probs=66.3
Q ss_pred CeEEEecCCCChHH-HHHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhc--cCC--------CCCeEEEEcchhhhhccC
Q 039591 132 KKVAFVGSGPMPLT-SIVMAKNHLKATHFDNFDIDEAANNVARRIVATD--FEF--------EKRMKFLTGDILQVKEKL 200 (284)
Q Consensus 132 ~~VL~iGsGp~G~~-ai~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~--~~l--------~~~v~~~~~D~~~~~~~l 200 (284)
.+|..||+|-+|.. +..|++ ..+|.+|+++|++++.++..++..... .++ ..++++ +.|..+. +
T Consensus 10 mkI~VIG~G~vG~~~A~~La~-~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~-t~~~~~~---~ 84 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAH-KCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFF-SSDIPKA---I 84 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHH-HCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE-ESCHHHH---H
T ss_pred CEEEEECCCHHHHHHHHHHHh-cCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEE-ECCHHHH---h
Confidence 58999999999986 445666 334789999999999988765311000 000 113443 3443322 2
Q ss_pred CCccEEEEcCcCCC-----------CHHHHHHHHHHHHhccccCcEEEEEe
Q 039591 201 GEYDCIFLAALVGM-----------SKEEKMKIIRHIRKYMKDGGILLVRS 240 (284)
Q Consensus 201 ~~fD~V~~~~~~~~-----------~~~~k~~~l~~~~~~L~pGG~lv~~~ 240 (284)
...|+||++..... .......+++.+.+.+++|.+++..+
T Consensus 85 ~~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~S 135 (481)
T 2o3j_A 85 AEADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKS 135 (481)
T ss_dssp HHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred hcCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECC
Confidence 46899999854321 11235778889999999998887654
No 500
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=94.72 E-value=0.13 Score=48.73 Aligned_cols=99 Identities=18% Similarity=0.211 Sum_probs=63.6
Q ss_pred CeEEEecCCCChHHH-HHHHhhcCCCcEEEEEeCCHHHHHHHHHHHhhccCCCCCeEEEEcchhhhhccCCCccEEEEcC
Q 039591 132 KKVAFVGSGPMPLTS-IVMAKNHLKATHFDNFDIDEAANNVARRIVATDFEFEKRMKFLTGDILQVKEKLGEYDCIFLAA 210 (284)
Q Consensus 132 ~~VL~iGsGp~G~~a-i~la~~~~~~~~V~~vDis~~~~~~A~~~~~~~~~l~~~v~~~~~D~~~~~~~l~~fD~V~~~~ 210 (284)
.+|..||+|-+|..- ..|++ .|.+|+.+|.+++.++...+...... ...++. ...|..+....++..|+|+++.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~---~G~~V~v~dr~~~~~~~l~~~~g~~~-~~~~i~-~~~~~~e~v~~l~~aDvVilaV 76 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAE---KGFKVAVFNRTYSKSEEFMKANASAP-FAGNLK-AFETMEAFAASLKKPRKALILV 76 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHH---TTCCEEEECSSHHHHHHHHHHTTTST-TGGGEE-ECSCHHHHHHHBCSSCEEEECC
T ss_pred CEEEEEChHHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHHhcCCCC-CCCCeE-EECCHHHHHhcccCCCEEEEec
Confidence 479999999777653 33444 56789999999998876655321000 012233 2345555444445699999987
Q ss_pred cCCCCHHHHHHHHHHHHhccccCcEEEE
Q 039591 211 LVGMSKEEKMKIIRHIRKYMKDGGILLV 238 (284)
Q Consensus 211 ~~~~~~~~k~~~l~~~~~~L~pGG~lv~ 238 (284)
..+ ..-..+++.+...++||.+++-
T Consensus 77 p~~---~~v~~vl~~l~~~l~~g~iIId 101 (478)
T 1pgj_A 77 QAG---AATDSTIEQLKKVFEKGDILVD 101 (478)
T ss_dssp CCS---HHHHHHHHHHHHHCCTTCEEEE
T ss_pred CCh---HHHHHHHHHHHhhCCCCCEEEE
Confidence 542 2335677888889999886653
Done!