BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>039593
MGSYIFCVICILYSLISITCGSSIMFYLKEMYVIGHGVETAQKLTGSTPHDQLLIQISNS
FAGLLLFVVGFLLFMVAFVKDAEFQSFFAKGCMLVHVSMALWRVVFERRLADLAWDWPRQ
VVGDLALALSWVFFLVYSWREKYD

High Scoring Gene Products

Symbol, full name Information P value
AT1G53035 protein from Arabidopsis thaliana 5.5e-38
AT3G15358 protein from Arabidopsis thaliana 1.1e-37

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  039593
        (144 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006180 - symbol:AT1G53035 "AT1G53035" speci...   407  5.5e-38   1
TAIR|locus:1006230226 - symbol:AT3G15358 "AT3G15358" spec...   404  1.1e-37   1


>TAIR|locus:505006180 [details] [associations]
            symbol:AT1G53035 "AT1G53035" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0007623 "circadian rhythm" evidence=RCA]
            EMBL:CP002684 EMBL:AF380658 EMBL:AY054158 EMBL:AK119066
            IPI:IPI00546618 RefSeq:NP_564621.1 UniGene:At.19104
            UniGene:At.74117 STRING:Q93VW7 EnsemblPlants:AT1G53035.1
            GeneID:841737 KEGG:ath:AT1G53035 TAIR:At1g53035
            HOGENOM:HOG000005986 InParanoid:Q93VW7 OMA:EDLAYEW PhylomeDB:Q93VW7
            ProtClustDB:CLSN2688742 Genevestigator:Q93VW7 Uniprot:Q93VW7
        Length = 150

 Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
 Identities = 76/144 (52%), Positives = 101/144 (70%)

Query:     1 MGSYIFCVICILYSLISITCGSSIMFYLKEMYVIGHGVETAQKLTGSTPHDQLLIQISNS 60
             M   +F VICIL+S+I++T G+ +MFY ++  + G G E A KL GSTPHD+LLIQIS S
Sbjct:     7 MNPSLFRVICILHSIIALTSGTLMMFYTEKASIFGPGSEIASKLKGSTPHDELLIQISQS 66

Query:    61 XXXXXXXXXXXXXXXXXXXKDAEFQSFFAKGCMLVHVSMALWRVVFERRLADLAWDWPRQ 120
                                KD EF SFFA G ++++V MA+WRV+FE ++ DLA++WP+Q
Sbjct:    67 FSGLLLFAIGLVLFMVSFVKDKEFHSFFAGGSVILYVLMAMWRVLFEWKIEDLAYEWPKQ 126

Query:   121 VVGDLALALSWVFFLVYSWREKYD 144
              +GD+ALA+SWVFFLVYSWREKYD
Sbjct:   127 ALGDIALAISWVFFLVYSWREKYD 150


>TAIR|locus:1006230226 [details] [associations]
            symbol:AT3G15358 "AT3G15358" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AP000413
            HOGENOM:HOG000005986 ProtClustDB:CLSN2688742 EMBL:BT006142
            EMBL:BT008544 EMBL:AK229695 IPI:IPI00532788 RefSeq:NP_974320.1
            UniGene:At.46974 EnsemblPlants:AT3G15358.1 GeneID:2745884
            KEGG:ath:AT3G15358 TAIR:At3g15358 eggNOG:NOG279483
            InParanoid:Q9LJR0 OMA:EDLAFEC PhylomeDB:Q9LJR0
            Genevestigator:Q9LJR0 Uniprot:Q9LJR0
        Length = 144

 Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
 Identities = 75/144 (52%), Positives = 102/144 (70%)

Query:     1 MGSYIFCVICILYSLISITCGSSIMFYLKEMYVIGHGVETAQKLTGSTPHDQLLIQISNS 60
             M SY+F VICIL+S+I++T G+ +MFY ++  + GHG + A KL GSTPHD+ LIQIS S
Sbjct:     1 MNSYLFRVICILHSIIALTSGTLMMFYTEKASIFGHGSDIANKLKGSTPHDEQLIQISQS 60

Query:    61 XXXXXXXXXXXXXXXXXXXKDAEFQSFFAKGCMLVHVSMALWRVVFERRLADLAWDWPRQ 120
                                KD EF SFFA G +++++ MALWRV+FE ++ DLA++ P+Q
Sbjct:    61 FSGLLLFAIGLVLFMVSFVKDREFHSFFAAGSVILYMVMALWRVMFEWKIEDLAFECPKQ 120

Query:   121 VVGDLALALSWVFFLVYSWREKYD 144
              +GD+ALA+SWVFFLVY+WREKYD
Sbjct:   121 ALGDIALAVSWVFFLVYTWREKYD 144


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.329   0.140   0.459    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      144       125   0.00091  102 3  11 22  0.41    30
                                                     29  0.39    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  589 (63 KB)
  Total size of DFA:  147 KB (2089 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.90u 0.23s 10.13t   Elapsed:  00:00:00
  Total cpu time:  9.90u 0.23s 10.13t   Elapsed:  00:00:01
  Start:  Sat May 11 08:07:58 2013   End:  Sat May 11 08:07:59 2013

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