Query 039593
Match_columns 144
No_of_seqs 22 out of 24
Neff 1.8
Searched_HMMs 13730
Date Mon Mar 25 19:16:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039593.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/039593hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1mbaa_ a.1.1.2 (A:) Myoglobin 50.5 5.1 0.00037 25.3 2.6 41 48-90 3-45 (146)
2 d1itha_ a.1.1.2 (A:) Hemoglobi 45.9 6.9 0.0005 25.7 2.8 44 46-89 1-45 (141)
3 d1lghb_ f.3.1.1 (B:) Light-har 34.0 11 0.00077 22.5 2.0 22 82-103 12-40 (43)
4 d1fsla_ a.1.1.2 (A:) Leghemogl 28.7 16 0.0012 22.6 2.3 44 47-90 3-46 (143)
5 d1azsb_ d.58.29.1 (B:) Adenyly 25.5 11 0.00077 25.6 1.0 32 30-63 138-169 (199)
6 d1jo5a_ f.3.1.1 (A:) Light-har 25.5 19 0.0014 21.7 2.1 23 82-104 17-46 (48)
7 d1wc1a_ d.58.29.1 (A:) Adenyla 25.0 6.7 0.00049 25.5 -0.2 32 29-62 133-164 (197)
8 d3d1ka1 a.1.1.2 (A:1-142) Hemo 24.8 26 0.0019 22.2 2.8 41 48-90 3-45 (142)
9 d1lhta_ a.1.1.2 (A:) Myoglobin 24.4 29 0.0021 22.2 3.0 45 46-90 1-45 (153)
10 d2gdma_ a.1.1.2 (A:) Leghemogl 24.3 23 0.0017 22.1 2.5 42 46-89 2-45 (153)
11 d1it2a_ a.1.1.2 (A:) Hagfish h 22.3 24 0.0017 22.6 2.3 42 46-89 10-53 (146)
12 d1b0ba_ a.1.1.2 (A:) Hemoglobi 21.9 34 0.0024 21.4 2.9 41 48-90 3-45 (142)
13 d1di0a_ c.16.1.1 (A:) Lumazine 21.2 12 0.00087 25.9 0.6 15 44-58 72-86 (148)
14 d1kz1a_ c.16.1.1 (A:) Lumazine 20.8 10 0.00075 26.4 0.1 15 44-58 80-94 (150)
15 d1nqua_ c.16.1.1 (A:) Lumazine 20.6 10 0.00076 26.4 0.1 20 44-65 82-101 (154)
16 d1jl7a_ a.1.1.2 (A:) Glycera g 20.3 34 0.0025 21.1 2.7 45 46-90 1-47 (147)
17 d1c2ya_ c.16.1.1 (A:) Lumazine 20.1 11 0.00081 26.4 0.2 15 44-58 82-96 (155)
No 1
>d1mbaa_ a.1.1.2 (A:) Myoglobin {Slug sea hare (Aplysia limacina) [TaxId: 6502]}
Probab=50.49 E-value=5.1 Score=25.32 Aligned_cols=41 Identities=22% Similarity=0.233 Sum_probs=30.0
Q ss_pred CccchhhhhhccchhhH--HHHHHHHHHHHHHHhcchhhhhhhhh
Q 039593 48 TPHDQLLIQISNSFAGL--LLFVVGFLLFMVAFVKDAEFQSFFAK 90 (144)
Q Consensus 48 TPhDqlLIqtSdSFsGl--LLF~iGfllfMVafVkdrefqsFfak 90 (144)
||+|+-+||.| +.-+ =.-.+|--+|---|-+++|.|.+|.+
T Consensus 3 s~~~~~~v~~s--W~~v~~~~~~~g~~if~~lF~~~P~~~~~F~~ 45 (146)
T d1mbaa_ 3 SAAEADLAGKS--WAPVFANKNANGLDFLVALFEKFPDSANFFAD 45 (146)
T ss_dssp CHHHHHHHHHH--HHHHHHTHHHHHHHHHHHHHHHCGGGGGGCTT
T ss_pred CHHHHHHHHHH--HHHHHccHHHHHHHHHHHHHHHCHHHHHHhhh
Confidence 67888888754 2221 12457888888999999999999964
No 2
>d1itha_ a.1.1.2 (A:) Hemoglobin {Innkeeper worm (Urechis caupo) [TaxId: 6431]}
Probab=45.88 E-value=6.9 Score=25.65 Aligned_cols=44 Identities=18% Similarity=-0.014 Sum_probs=34.4
Q ss_pred CCCccchhhhhhcc-chhhHHHHHHHHHHHHHHHhcchhhhhhhh
Q 039593 46 GSTPHDQLLIQISN-SFAGLLLFVVGFLLFMVAFVKDAEFQSFFA 89 (144)
Q Consensus 46 GSTPhDqlLIqtSd-SFsGlLLF~iGfllfMVafVkdrefqsFfa 89 (144)
|=|+.|.-+||-|= ....-=.-++|--+|+--|-+.+|.|.+|.
T Consensus 1 GLT~~q~~~i~~sW~~~~~~~~~~~g~~~f~~lF~~~P~~~~~F~ 45 (141)
T d1itha_ 1 GLTAAQIKAIQDHWFLNIKGCLQAAADSIFFKYLTAYPGDLAFFH 45 (141)
T ss_dssp CCCHHHHHHHHHHHHHHTGGGHHHHHHHHHHHHHHHSGGGGGGCT
T ss_pred CcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCHHHHHHhh
Confidence 56788888888773 222333567899999999999999999996
No 3
>d1lghb_ f.3.1.1 (B:) Light-harvesting complex subunits {Rhodospirillum molischianum [TaxId: 1083]}
Probab=34.02 E-value=11 Score=22.48 Aligned_cols=22 Identities=18% Similarity=0.451 Sum_probs=14.8
Q ss_pred hhhhhhhhhh-------hHhHHHHHHHHH
Q 039593 82 AEFQSFFAKG-------CMLVHVSMALWR 103 (144)
Q Consensus 82 refqsFfakg-------c~~lhv~ma~WR 103 (144)
+||++.|-+| +++-|+..-+||
T Consensus 12 ~EfH~~~~~g~~~F~~iAvvAHiLvw~wr 40 (43)
T d1lghb_ 12 IAVHDQFKTTFSAFIILAAVAHVLVWVWK 40 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4566655554 667788888887
No 4
>d1fsla_ a.1.1.2 (A:) Leghemoglobin {Soybean (Glycine max), isoform A [TaxId: 3847]}
Probab=28.66 E-value=16 Score=22.59 Aligned_cols=44 Identities=11% Similarity=0.067 Sum_probs=30.4
Q ss_pred CCccchhhhhhccchhhHHHHHHHHHHHHHHHhcchhhhhhhhh
Q 039593 47 STPHDQLLIQISNSFAGLLLFVVGFLLFMVAFVKDAEFQSFFAK 90 (144)
Q Consensus 47 STPhDqlLIqtSdSFsGlLLF~iGfllfMVafVkdrefqsFfak 90 (144)
=|+.+..|||-|=+---==.=.+|--+|.--|-+++|.|+.|.+
T Consensus 3 lT~~q~~li~~SW~~v~~~~~~~g~~~f~~lF~~~P~~~~~F~~ 46 (143)
T d1fsla_ 3 FTEKQDALVSSSFEAFKANIPQYSVVFYTSILEKAPAAKDLFSF 46 (143)
T ss_dssp CCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTTHHHHCGG
T ss_pred CCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHCHHHHHhccc
Confidence 46677777775422111112368888999999999999999964
No 5
>d1azsb_ d.58.29.1 (B:) Adenylyl cyclase IIC1, domain C2a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=25.51 E-value=11 Score=25.55 Aligned_cols=32 Identities=13% Similarity=0.250 Sum_probs=26.7
Q ss_pred eeeeeecchhhhHhhhCCCccchhhhhhccchhh
Q 039593 30 EMYVIGHGVETAQKLTGSTPHDQLLIQISNSFAG 63 (144)
Q Consensus 30 ei~vfgHG~etA~KL~GSTPhDqlLIqtSdSFsG 63 (144)
+..++|-...+|.+|...+|++|.+ +|++..-
T Consensus 138 ~y~v~Gd~VN~AaRle~~a~~g~I~--vS~~t~~ 169 (199)
T d1azsb_ 138 QYDIWGNTVNVASRMDSTGVLDKIQ--VTEETSL 169 (199)
T ss_dssp EEEEESHHHHHHHHHHHTCCTTEEE--EEHHHHH
T ss_pred cccccchHHHHHHHHHhcCCCCeEE--ECHHHHH
Confidence 5679999999999999999999965 5666544
No 6
>d1jo5a_ f.3.1.1 (A:) Light-harvesting complex subunits {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=25.46 E-value=19 Score=21.73 Aligned_cols=23 Identities=26% Similarity=0.769 Sum_probs=15.9
Q ss_pred hhhhhhhhhh-------hHhHHHHHHHHHH
Q 039593 82 AEFQSFFAKG-------CMLVHVSMALWRV 104 (144)
Q Consensus 82 refqsFfakg-------c~~lhv~ma~WR~ 104 (144)
+||++.|-.| +++-|+..-+||=
T Consensus 17 ~E~H~~~~~g~~~F~~iAvvAH~L~w~wrP 46 (48)
T d1jo5a_ 17 QELHSVYMSGLWLFSAVAIVAHLAVYIWRP 46 (48)
T ss_dssp HHHHHHHHHTTTHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4566655444 6778888888874
No 7
>d1wc1a_ d.58.29.1 (A:) Adenylate cyclase CyaC {Spirulina platensis [TaxId: 118562]}
Probab=25.03 E-value=6.7 Score=25.51 Aligned_cols=32 Identities=25% Similarity=0.430 Sum_probs=26.0
Q ss_pred eeeeeeecchhhhHhhhCCCccchhhhhhccchh
Q 039593 29 KEMYVIGHGVETAQKLTGSTPHDQLLIQISNSFA 62 (144)
Q Consensus 29 kei~vfgHG~etA~KL~GSTPhDqlLIqtSdSFs 62 (144)
.|..++|....+|.+|+..++-+|++| |++..
T Consensus 133 ~~y~~~G~~Vn~AaRle~~a~~~~Ili--se~~~ 164 (197)
T d1wc1a_ 133 SDFTAIGPSVNIAARLQEATAPNSIMV--SAMVA 164 (197)
T ss_dssp EEEEEESHHHHHHHHHHHHSCTTCEEE--EHHHH
T ss_pred ccccccccHHHHHHHHHhcCCCCEEEE--eHHHH
Confidence 467899999999999999998888655 55543
No 8
>d3d1ka1 a.1.1.2 (A:1-142) Hemoglobin, alpha-chain {Antarctic fish (Trematomus newnesi) [TaxId: 35730]}
Probab=24.76 E-value=26 Score=22.24 Aligned_cols=41 Identities=10% Similarity=0.142 Sum_probs=29.6
Q ss_pred CccchhhhhhccchhhH--HHHHHHHHHHHHHHhcchhhhhhhhh
Q 039593 48 TPHDQLLIQISNSFAGL--LLFVVGFLLFMVAFVKDAEFQSFFAK 90 (144)
Q Consensus 48 TPhDqlLIqtSdSFsGl--LLF~iGfllfMVafVkdrefqsFfak 90 (144)
|+.|.-+||.| ++-+ =...+|--+|.--|.+++|.|.+|.+
T Consensus 3 s~~e~~~I~~s--W~~v~~~~~~~g~~~~~rlF~~~P~~~~~F~~ 45 (142)
T d3d1ka1 3 SDKDKAAVRAL--WSKIGKSSDAIGNDALSRMIVVYPQTKIYFSH 45 (142)
T ss_dssp CHHHHHHHHHH--HHHHGGGHHHHHHHHHHHHHHHSGGGGGGGTT
T ss_pred CHHHHHHHHHH--HHHHHcCHHHHHHHHHHHHHHHChhHHHhhhh
Confidence 44555566543 3322 45568999999999999999999965
No 9
>d1lhta_ a.1.1.2 (A:) Myoglobin {Loggerhead sea turtle (Caretta caretta) [TaxId: 8467]}
Probab=24.36 E-value=29 Score=22.18 Aligned_cols=45 Identities=20% Similarity=0.029 Sum_probs=31.3
Q ss_pred CCCccchhhhhhccchhhHHHHHHHHHHHHHHHhcchhhhhhhhh
Q 039593 46 GSTPHDQLLIQISNSFAGLLLFVVGFLLFMVAFVKDAEFQSFFAK 90 (144)
Q Consensus 46 GSTPhDqlLIqtSdSFsGlLLF~iGfllfMVafVkdrefqsFfak 90 (144)
|=|+.|.-+||-|=.--.-=.-.+|--+|.--|.+++|.|++|.+
T Consensus 1 gLs~~e~~~I~~sW~~v~~~~~~~g~~~f~rlF~~~P~~~~~F~~ 45 (153)
T d1lhta_ 1 GLSDDEWNHVLGIWAKVEPDLSAHGQEVIIRLFQLHPETQERFAK 45 (153)
T ss_dssp CCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHCGGGGGGCGG
T ss_pred CcCHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHChHHHHHhhh
Confidence 445666666664422211124578999999999999999999964
No 10
>d2gdma_ a.1.1.2 (A:) Leghemoglobin {Yellow lupin (Lupinus luteus) [TaxId: 3873]}
Probab=24.33 E-value=23 Score=22.08 Aligned_cols=42 Identities=12% Similarity=0.189 Sum_probs=30.2
Q ss_pred CCCccchhhhhhccchhhH--HHHHHHHHHHHHHHhcchhhhhhhh
Q 039593 46 GSTPHDQLLIQISNSFAGL--LLFVVGFLLFMVAFVKDAEFQSFFA 89 (144)
Q Consensus 46 GSTPhDqlLIqtSdSFsGl--LLF~iGfllfMVafVkdrefqsFfa 89 (144)
|=|+.+..+||-| +.=+ =.=.+|--+|.--|-+++++|++|.
T Consensus 2 ~Lt~~q~~li~~S--W~~v~~~~~~~g~~~f~~lF~~~P~~k~~F~ 45 (153)
T d2gdma_ 2 ALTESQAALVKSS--WEEFNANIPKHTHRFFILVLEIAPAAKDLFS 45 (153)
T ss_dssp CCCHHHHHHHHHH--HHHHHTTHHHHHHHHHHHHHHHCGGGGGGCT
T ss_pred CCCHHHHHHHHHH--HHHHHhhHHHHHHHHHHHHHHHCHHHHHHhh
Confidence 3466677777643 3222 1347888899999999999999995
No 11
>d1it2a_ a.1.1.2 (A:) Hagfish hemoglobin {Inshore hagfish (Eptatretus burgeri) [TaxId: 7764]}
Probab=22.34 E-value=24 Score=22.57 Aligned_cols=42 Identities=12% Similarity=0.010 Sum_probs=32.8
Q ss_pred CCCccchhhhhhccchhhH--HHHHHHHHHHHHHHhcchhhhhhhh
Q 039593 46 GSTPHDQLLIQISNSFAGL--LLFVVGFLLFMVAFVKDAEFQSFFA 89 (144)
Q Consensus 46 GSTPhDqlLIqtSdSFsGl--LLF~iGfllfMVafVkdrefqsFfa 89 (144)
+=|+.|.-+||.| ..-+ =.-.+|--+|.--|-+++|.|.+|.
T Consensus 10 ~LT~~e~~lI~~s--W~~v~~~~~~~G~~~f~~lF~~~P~~~~~F~ 53 (146)
T d1it2a_ 10 TLTDGDKKAINKI--WPKIYKEYEQYSLNILLRFLKCFPQAQASFP 53 (146)
T ss_dssp CCCHHHHHHHHHH--HHHHHTTHHHHHHHHHHHHHHHCGGGGGGCT
T ss_pred CCCHHHHHHHHHH--HHHHHcCHHHHHHHHHHHHHHHCccHHHHHH
Confidence 4577888888765 3332 3557899999999999999999995
No 12
>d1b0ba_ a.1.1.2 (A:) Hemoglobin I {Clam (Lucina pectinata) [TaxId: 29163]}
Probab=21.94 E-value=34 Score=21.41 Aligned_cols=41 Identities=17% Similarity=0.157 Sum_probs=29.3
Q ss_pred CccchhhhhhccchhhH--HHHHHHHHHHHHHHhcchhhhhhhhh
Q 039593 48 TPHDQLLIQISNSFAGL--LLFVVGFLLFMVAFVKDAEFQSFFAK 90 (144)
Q Consensus 48 TPhDqlLIqtSdSFsGl--LLF~iGfllfMVafVkdrefqsFfak 90 (144)
|+++.-+||-| +.-+ =.=.+|.-+|.--|-+.++.|+.|.+
T Consensus 3 t~~q~~~i~~s--W~~v~~~~~~~g~~if~~lF~~~P~~k~~F~~ 45 (142)
T d1b0ba_ 3 SAAQKDNVKSS--WAKASAAWGTAGPEFFMALFDAHDDVFAKFSG 45 (142)
T ss_dssp CHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHCHHHHHTTTT
T ss_pred CHHHHHHHHHH--HHHHHccHHHHHHHHHHHHHHHhHHHHHHhhh
Confidence 56666666643 3222 23468999999999999999998854
No 13
>d1di0a_ c.16.1.1 (A:) Lumazine synthase {Brucella abortus [TaxId: 235]}
Probab=21.24 E-value=12 Score=25.87 Aligned_cols=15 Identities=7% Similarity=0.202 Sum_probs=12.1
Q ss_pred hhCCCccchhhhhhc
Q 039593 44 LTGSTPHDQLLIQIS 58 (144)
Q Consensus 44 L~GSTPhDqlLIqtS 58 (144)
.+|.|||++.+-+.+
T Consensus 72 IkGeT~H~e~I~~~v 86 (148)
T d1di0a_ 72 IDGGIYDHDFVATAV 86 (148)
T ss_dssp CCCSSBCCHHHHHHH
T ss_pred ecCCchHHHHHHHHH
Confidence 579999999886653
No 14
>d1kz1a_ c.16.1.1 (A:) Lumazine synthase {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=20.84 E-value=10 Score=26.36 Aligned_cols=15 Identities=27% Similarity=0.355 Sum_probs=12.5
Q ss_pred hhCCCccchhhhhhc
Q 039593 44 LTGSTPHDQLLIQIS 58 (144)
Q Consensus 44 L~GSTPhDqlLIqtS 58 (144)
.+|.|||.+.+-+.+
T Consensus 80 IkGeT~H~e~I~~~v 94 (150)
T d1kz1a_ 80 IKGSTMHFEYISEAV 94 (150)
T ss_dssp ECCSSSHHHHHHHHH
T ss_pred ecCcchHHHHHHHHH
Confidence 579999999987754
No 15
>d1nqua_ c.16.1.1 (A:) Lumazine synthase {Aquifex aeolicus [TaxId: 63363]}
Probab=20.59 E-value=10 Score=26.43 Aligned_cols=20 Identities=30% Similarity=0.459 Sum_probs=14.3
Q ss_pred hhCCCccchhhhhhccchhhHH
Q 039593 44 LTGSTPHDQLLIQISNSFAGLL 65 (144)
Q Consensus 44 L~GSTPhDqlLIqtSdSFsGlL 65 (144)
.+|.|||++..-|. ..+||.
T Consensus 82 IkGeT~H~e~I~~~--v~~gl~ 101 (154)
T d1nqua_ 82 IRGATPHFDYIASE--VSKGLA 101 (154)
T ss_dssp ECCSSTHHHHHHHH--HHHHHH
T ss_pred EeCCchHHHHHHHH--HHHHHH
Confidence 57999999998764 344544
No 16
>d1jl7a_ a.1.1.2 (A:) Glycera globin {Marine bloodworm (Glycera dibranchiata) [TaxId: 6350]}
Probab=20.34 E-value=34 Score=21.12 Aligned_cols=45 Identities=11% Similarity=-0.034 Sum_probs=30.6
Q ss_pred CCCccchhhhhhccchh--hHHHHHHHHHHHHHHHhcchhhhhhhhh
Q 039593 46 GSTPHDQLLIQISNSFA--GLLLFVVGFLLFMVAFVKDAEFQSFFAK 90 (144)
Q Consensus 46 GSTPhDqlLIqtSdSFs--GlLLF~iGfllfMVafVkdrefqsFfak 90 (144)
|=|+.+.-+||.|=+-- +--.-.+|--+|.--|-+++|.|++|.+
T Consensus 1 gLs~~q~~~i~~sW~~v~~~~~~~~~g~~~f~rlF~~~P~~~~~F~~ 47 (147)
T d1jl7a_ 1 GLSAAQRQVVASTWKDIAGADNGAGVGKECLSKFISAHPEMAAVFGF 47 (147)
T ss_dssp CCCHHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHHHCGGGHHHHTC
T ss_pred CcCHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHCHHHHHhCcc
Confidence 45677777776543220 0012467888898999999999999963
No 17
>d1c2ya_ c.16.1.1 (A:) Lumazine synthase {Spinach (Spinacia oleracea) [TaxId: 3562]}
Probab=20.05 E-value=11 Score=26.35 Aligned_cols=15 Identities=20% Similarity=0.439 Sum_probs=12.3
Q ss_pred hhCCCccchhhhhhc
Q 039593 44 LTGSTPHDQLLIQIS 58 (144)
Q Consensus 44 L~GSTPhDqlLIqtS 58 (144)
.+|.|||++..-|.+
T Consensus 82 IkGeT~H~e~I~~~v 96 (155)
T d1c2ya_ 82 VKGDTSHYDAVVNSA 96 (155)
T ss_dssp CCCSSTHHHHHHHHH
T ss_pred EcCCchHHHHHHHHH
Confidence 579999999987653
Done!