Query 039595
Match_columns 1078
No_of_seqs 1057 out of 6939
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 19:20:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039595.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039595hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 2.3E-89 7.7E-94 863.0 41.7 640 20-678 5-753 (768)
2 3rgz_A Protein brassinosteroid 100.0 4.3E-70 1.5E-74 687.4 32.6 561 77-643 100-740 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 1.1E-63 3.9E-68 623.4 40.2 546 102-647 25-626 (680)
4 1ziw_A TOLL-like receptor 3; i 100.0 1.9E-62 6.6E-67 612.3 42.4 556 107-665 9-624 (680)
5 3j0a_A TOLL-like receptor 5; m 100.0 7.8E-59 2.7E-63 591.0 42.0 521 100-649 22-566 (844)
6 3t6q_A CD180 antigen; protein- 100.0 6.1E-59 2.1E-63 572.8 36.5 518 102-648 33-565 (606)
7 3t6q_A CD180 antigen; protein- 100.0 5.1E-58 1.8E-62 564.6 39.5 527 67-623 14-564 (606)
8 4eco_A Uncharacterized protein 100.0 1.8E-59 6E-64 577.2 22.5 520 24-596 27-601 (636)
9 3j0a_A TOLL-like receptor 5; m 100.0 4E-57 1.4E-61 575.2 38.9 518 65-623 14-564 (844)
10 3vq2_A TLR4, TOLL-like recepto 100.0 1.5E-57 5.2E-62 560.4 33.4 520 102-648 32-563 (606)
11 3vq2_A TLR4, TOLL-like recepto 100.0 4E-57 1.4E-61 556.6 34.4 534 62-623 4-562 (606)
12 4ecn_A Leucine-rich repeat pro 100.0 2.3E-56 7.9E-61 557.0 32.9 492 23-571 265-864 (876)
13 2z63_A TOLL-like receptor 4, v 100.0 2.4E-51 8.2E-56 501.5 32.9 512 128-651 9-539 (570)
14 2z81_A CD282 antigen, TOLL-lik 100.0 1.6E-51 5.6E-56 500.4 29.0 475 117-648 19-515 (549)
15 2z63_A TOLL-like receptor 4, v 100.0 3.2E-51 1.1E-55 500.4 31.5 492 102-624 28-536 (570)
16 4fih_A Serine/threonine-protei 100.0 7.9E-52 2.7E-56 460.3 19.4 255 751-1025 74-329 (346)
17 4eco_A Uncharacterized protein 100.0 3.5E-52 1.2E-56 512.3 18.3 461 102-622 81-603 (636)
18 4b9d_A Serine/threonine-protei 100.0 6.8E-52 2.3E-56 461.6 18.6 258 751-1025 24-282 (350)
19 4aw0_A HPDK1, 3-phosphoinositi 100.0 3.2E-51 1.1E-55 448.5 17.3 256 750-1024 31-295 (311)
20 3hyh_A Carbon catabolite-derep 100.0 1.3E-50 4.4E-55 438.0 20.5 254 751-1025 13-268 (275)
21 4fie_A Serine/threonine-protei 100.0 1.3E-50 4.4E-55 461.6 20.7 255 751-1025 151-406 (423)
22 3fpq_A Serine/threonine-protei 100.0 3E-50 1E-54 439.2 20.9 252 754-1025 29-288 (290)
23 4ecn_A Leucine-rich repeat pro 100.0 8.5E-50 2.9E-54 497.9 26.3 488 102-643 323-864 (876)
24 3ubd_A Ribosomal protein S6 ki 100.0 1.3E-50 4.4E-55 444.1 14.4 255 751-1025 24-287 (304)
25 3omv_A RAF proto-oncogene seri 100.0 2.8E-49 9.4E-54 434.7 23.2 258 749-1022 34-296 (307)
26 4aoj_A High affinity nerve gro 100.0 2.7E-49 9.1E-54 441.4 23.0 254 751-1022 41-315 (329)
27 4gt4_A Tyrosine-protein kinase 100.0 1.7E-49 5.8E-54 438.8 20.2 255 751-1022 26-302 (308)
28 4asz_A BDNF/NT-3 growth factor 100.0 1.3E-49 4.4E-54 437.8 19.1 251 751-1019 13-282 (299)
29 2z81_A CD282 antigen, TOLL-lik 100.0 7.4E-49 2.5E-53 477.1 27.1 492 64-623 3-514 (549)
30 4g8a_A TOLL-like receptor 4; l 100.0 1.5E-47 5.3E-52 474.2 36.7 513 102-647 52-584 (635)
31 2z7x_B TOLL-like receptor 1, v 100.0 1.1E-48 3.6E-53 472.1 24.2 460 129-647 3-485 (520)
32 4g3f_A NF-kappa-beta-inducing 100.0 7.3E-49 2.5E-53 435.3 19.2 250 750-1023 57-313 (336)
33 2z7x_B TOLL-like receptor 1, v 100.0 2.7E-48 9.1E-53 468.6 23.9 454 105-623 3-485 (520)
34 4g31_A Eukaryotic translation 100.0 5.5E-48 1.9E-52 425.7 20.6 256 751-1025 5-285 (299)
35 4ase_A Vascular endothelial gr 100.0 5.7E-48 1.9E-52 434.0 17.6 265 742-1022 55-343 (353)
36 3hmm_A TGF-beta receptor type- 100.0 1.1E-46 3.8E-51 417.6 20.0 262 751-1022 3-293 (303)
37 4b99_A Mitogen-activated prote 100.0 7.1E-46 2.4E-50 424.5 22.3 264 751-1025 54-350 (398)
38 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 8.6E-46 2.9E-50 450.5 23.4 463 126-648 31-515 (562)
39 4g8a_A TOLL-like receptor 4; l 100.0 9.4E-45 3.2E-49 449.2 33.0 516 117-664 45-581 (635)
40 4f9c_A Cell division cycle 7-r 100.0 1.2E-45 4.2E-50 418.3 20.5 264 746-1024 16-357 (361)
41 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 9.2E-45 3.1E-49 441.5 25.4 457 104-623 33-514 (562)
42 3v5w_A G-protein coupled recep 100.0 7.6E-45 2.6E-49 431.6 21.1 260 750-1026 188-456 (689)
43 3uto_A Twitchin; kinase, muscl 100.0 1.9E-44 6.6E-49 433.5 22.0 258 750-1025 156-416 (573)
44 1ogq_A PGIP-2, polygalacturona 100.0 7.2E-44 2.5E-48 399.1 18.1 298 23-356 2-306 (313)
45 1jl5_A Outer protein YOPM; leu 100.0 1.1E-42 3.8E-47 408.9 25.1 427 100-630 9-440 (454)
46 3v47_A TOLL-like receptor 5B a 100.0 4.3E-42 1.5E-46 407.2 28.0 364 102-479 30-412 (455)
47 1jl5_A Outer protein YOPM; leu 100.0 2.6E-41 9E-46 397.2 30.0 423 77-580 11-438 (454)
48 3fxz_A Serine/threonine-protei 100.0 3.4E-42 1.2E-46 383.0 21.2 257 750-1026 19-276 (297)
49 3v47_A TOLL-like receptor 5B a 100.0 1.1E-41 3.8E-46 403.7 25.4 385 224-650 12-415 (455)
50 3fe3_A MAP/microtubule affinit 100.0 6.7E-42 2.3E-46 385.2 20.9 256 749-1025 13-270 (328)
51 2c30_A Serine/threonine-protei 100.0 2.9E-41 1E-45 379.7 24.5 267 739-1025 23-300 (321)
52 1o6l_A RAC-beta serine/threoni 100.0 1.4E-41 4.6E-46 383.7 21.6 259 750-1027 4-268 (337)
53 3zgw_A Maternal embryonic leuc 100.0 7.7E-42 2.6E-46 386.8 19.1 256 749-1025 8-266 (347)
54 2yab_A Death-associated protei 100.0 2.7E-41 9.3E-46 384.8 23.3 262 749-1025 10-278 (361)
55 3soa_A Calcium/calmodulin-depe 100.0 2.7E-41 9.2E-46 394.9 21.6 262 749-1026 9-274 (444)
56 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.1E-41 3.7E-46 387.1 16.9 259 749-1026 21-287 (353)
57 4dc2_A Protein kinase C IOTA t 100.0 2.3E-41 8E-46 388.6 19.7 265 750-1025 51-324 (396)
58 3niz_A Rhodanese family protei 100.0 8.4E-41 2.9E-45 374.4 23.5 268 749-1025 19-306 (311)
59 1tki_A Titin; serine kinase, m 100.0 3.1E-41 1.1E-45 379.2 19.7 257 750-1025 4-263 (321)
60 2y0a_A Death-associated protei 100.0 7.8E-41 2.7E-45 377.1 22.0 264 750-1028 10-280 (326)
61 2bdw_A Hypothetical protein K1 100.0 7.7E-41 2.6E-45 382.3 22.1 260 749-1025 27-290 (362)
62 3a8x_A Protein kinase C IOTA t 100.0 8.4E-41 2.9E-45 379.0 21.8 265 750-1025 8-281 (345)
63 3c0i_A Peripheral plasma membr 100.0 2.7E-41 9.2E-46 384.9 17.7 265 750-1026 23-293 (351)
64 3a62_A Ribosomal protein S6 ki 100.0 4.9E-41 1.7E-45 378.9 19.5 259 750-1026 16-283 (327)
65 3uim_A Brassinosteroid insensi 100.0 9.1E-41 3.1E-45 377.3 21.6 279 740-1023 19-308 (326)
66 1ob3_A PFPK5, cell division co 100.0 1.1E-40 3.6E-45 369.5 21.0 266 751-1025 2-286 (288)
67 3o0g_A Cell division protein k 100.0 1.3E-40 4.5E-45 369.7 21.5 267 751-1025 2-288 (292)
68 3p86_A Serine/threonine-protei 100.0 4.7E-41 1.6E-45 375.8 18.0 263 744-1022 30-294 (309)
69 1xjd_A Protein kinase C, theta 100.0 3.5E-41 1.2E-45 381.4 17.1 261 747-1026 13-276 (345)
70 3h4j_B AMPK kdaid, SNF1-like p 100.0 3.6E-41 1.2E-45 379.8 16.6 255 750-1025 8-264 (336)
71 1fot_A TPK1 delta, CAMP-depend 100.0 1.4E-40 4.6E-45 372.8 20.6 255 750-1026 5-265 (318)
72 2zv2_A Calcium/calmodulin-depe 100.0 1.3E-40 4.5E-45 370.8 20.3 258 750-1024 12-297 (298)
73 3qd2_B Eukaryotic translation 100.0 1.8E-40 6.1E-45 375.8 21.2 256 750-1024 5-330 (332)
74 3tki_A Serine/threonine-protei 100.0 6.6E-41 2.2E-45 377.1 17.5 258 750-1025 6-267 (323)
75 4aw2_A Serine/threonine-protei 100.0 4.2E-41 1.4E-45 391.6 15.6 269 744-1025 67-344 (437)
76 3kn6_A Ribosomal protein S6 ki 100.0 9.3E-41 3.2E-45 376.2 17.8 256 756-1025 16-276 (325)
77 4fr4_A YANK1, serine/threonine 100.0 2.5E-40 8.6E-45 378.8 21.4 261 750-1027 14-279 (384)
78 2i0e_A Protein kinase C-beta I 100.0 1.3E-40 4.4E-45 378.0 18.2 258 749-1025 18-282 (353)
79 1kob_A Twitchin; kinase, intra 100.0 4.4E-40 1.5E-44 378.2 22.7 258 750-1025 50-310 (387)
80 4euu_A Serine/threonine-protei 100.0 1E-39 3.5E-44 367.3 25.1 269 750-1025 8-308 (319)
81 2qkw_B Protein kinase; three-h 100.0 1.2E-39 4.2E-44 367.0 25.6 270 745-1023 33-312 (321)
82 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.6E-40 8.7E-45 375.6 20.0 257 750-1028 40-302 (350)
83 3s95_A LIMK-1, LIM domain kina 100.0 1.6E-39 5.5E-44 364.2 25.5 254 750-1022 9-278 (310)
84 2w4o_A Calcium/calmodulin-depe 100.0 4.2E-40 1.4E-44 374.5 20.6 257 749-1025 51-311 (349)
85 2pmi_A Negative RE, cyclin-dep 100.0 5.5E-40 1.9E-44 368.9 21.1 267 750-1025 4-299 (317)
86 3hko_A Calcium/calmodulin-depe 100.0 3E-40 1E-44 376.2 19.3 268 746-1024 21-335 (345)
87 3v8s_A RHO-associated protein 100.0 1.2E-40 4E-45 385.0 15.9 265 745-1025 63-335 (410)
88 2r5t_A Serine/threonine-protei 100.0 2.4E-40 8.3E-45 378.4 18.3 258 750-1026 37-300 (373)
89 2x4f_A Myosin light chain kina 100.0 5E-40 1.7E-44 376.9 20.8 261 754-1032 92-355 (373)
90 3uc3_A Serine/threonine-protei 100.0 6.4E-40 2.2E-44 374.7 21.5 258 750-1025 19-280 (361)
91 3dbq_A Dual specificity protei 100.0 4.8E-40 1.7E-44 373.7 20.1 257 750-1025 8-279 (343)
92 2qr7_A Ribosomal protein S6 ki 100.0 1.6E-40 5.6E-45 376.2 15.2 257 749-1025 20-283 (342)
93 2y94_A 5'-AMP-activated protei 100.0 8.4E-40 2.9E-44 384.6 21.7 256 750-1025 15-272 (476)
94 4ejn_A RAC-alpha serine/threon 100.0 2.2E-40 7.6E-45 390.3 16.6 258 750-1026 147-411 (446)
95 2eue_A Carbon catabolite derep 100.0 6.2E-40 2.1E-44 360.8 19.1 254 751-1025 13-268 (275)
96 3fdn_A Serine/threonine-protei 100.0 6.7E-40 2.3E-44 361.4 19.1 256 749-1025 7-263 (279)
97 3kk8_A Calcium/calmodulin depe 100.0 1.2E-39 4.1E-44 360.3 21.0 259 750-1025 5-267 (284)
98 2a2a_A Death-associated protei 100.0 1.2E-39 4.1E-44 367.0 21.2 262 750-1026 11-279 (321)
99 3cok_A Serine/threonine-protei 100.0 7.2E-40 2.5E-44 360.9 18.8 261 749-1027 9-270 (278)
100 2psq_A Fibroblast growth facto 100.0 1.7E-39 5.8E-44 372.5 22.5 256 750-1022 80-360 (370)
101 3gni_B Strad alpha; kinase fol 100.0 9.1E-40 3.1E-44 378.5 20.1 271 750-1026 24-340 (389)
102 2nru_A Interleukin-1 receptor- 100.0 1.3E-38 4.6E-43 356.2 28.3 275 740-1022 14-302 (307)
103 4agu_A Cyclin-dependent kinase 100.0 8.7E-40 3E-44 366.6 18.5 267 750-1026 2-291 (311)
104 3f3z_A Calcium/calmodulin-depe 100.0 1.1E-39 3.7E-44 359.3 18.9 257 749-1025 7-267 (277)
105 3is5_A Calcium-dependent prote 100.0 1.5E-39 5.1E-44 359.7 20.0 259 750-1025 21-284 (285)
106 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.5E-39 5.3E-44 386.3 21.3 265 750-1026 184-455 (543)
107 2acx_A G protein-coupled recep 100.0 1.8E-39 6.1E-44 386.2 21.2 263 750-1026 183-451 (576)
108 2vd5_A DMPK protein; serine/th 100.0 4.9E-40 1.7E-44 380.0 15.9 267 744-1025 54-333 (412)
109 3g33_A Cell division protein k 100.0 2.1E-39 7.2E-44 362.9 20.5 271 749-1027 7-304 (308)
110 2zmd_A Dual specificity protei 100.0 1.9E-39 6.6E-44 374.6 20.8 257 751-1026 56-327 (390)
111 3bz5_A Internalin-J, INLJ; leu 100.0 6.8E-39 2.3E-43 377.0 25.8 222 158-404 26-247 (457)
112 2rku_A Serine/threonine-protei 100.0 2.7E-39 9.3E-44 359.4 21.1 256 750-1024 14-270 (294)
113 3mtl_A Cell division protein k 100.0 6.6E-40 2.2E-44 369.5 16.3 264 751-1025 2-287 (324)
114 3i6u_A CDS1, serine/threonine- 100.0 1.2E-39 4E-44 380.2 18.5 272 748-1034 132-414 (419)
115 4aaa_A Cyclin-dependent kinase 100.0 5.4E-39 1.8E-43 363.4 23.1 274 750-1032 24-319 (331)
116 3bz5_A Internalin-J, INLJ; leu 100.0 5.1E-38 1.8E-42 369.6 32.3 246 127-400 19-264 (457)
117 2owb_A Serine/threonine-protei 100.0 2.9E-39 9.8E-44 366.1 20.8 257 750-1025 40-297 (335)
118 3gbz_A Kinase, CMGC CDK; ssgci 100.0 9.9E-40 3.4E-44 368.9 16.8 269 747-1025 30-324 (329)
119 3ttj_A Mitogen-activated prote 100.0 4.3E-39 1.5E-43 379.5 22.6 262 750-1025 61-361 (464)
120 3p1a_A MYT1 kinase, membrane-a 100.0 2.2E-39 7.4E-44 363.0 19.1 251 751-1024 57-309 (311)
121 4hcu_A Tyrosine-protein kinase 100.0 2.6E-39 8.9E-44 354.6 19.2 254 750-1024 9-264 (269)
122 3bhy_A Death-associated protei 100.0 2.8E-39 9.7E-44 357.2 19.5 261 750-1025 4-271 (283)
123 3dls_A PAS domain-containing s 100.0 1.1E-39 3.8E-44 368.8 16.5 252 749-1025 22-280 (335)
124 2y7j_A Phosphorylase B kinase 100.0 3.1E-39 1E-43 369.9 20.3 266 744-1024 87-364 (365)
125 3lm5_A Serine/threonine-protei 100.0 2.3E-39 8E-44 365.5 18.4 270 741-1025 18-293 (327)
126 3a7i_A MST3 kinase, serine/thr 100.0 1.1E-38 3.9E-43 356.0 23.7 255 750-1025 21-276 (303)
127 1nxk_A MAP kinase-activated pr 100.0 5.2E-39 1.8E-43 372.1 21.5 256 750-1025 60-327 (400)
128 2yex_A Serine/threonine-protei 100.0 4.8E-39 1.6E-43 353.9 20.0 259 749-1025 5-267 (276)
129 2ac3_A MAP kinase-interacting 100.0 2.6E-39 8.7E-44 363.7 18.0 266 750-1025 11-301 (316)
130 3q4u_A Activin receptor type-1 100.0 6.7E-39 2.3E-43 357.6 21.2 255 750-1021 7-297 (301)
131 3lb7_A RAF proto-oncogene seri 100.0 1.4E-38 4.9E-43 355.4 23.9 260 750-1025 35-299 (307)
132 3nyv_A Calmodulin-domain prote 100.0 2.3E-39 7.8E-44 386.2 18.5 259 750-1025 25-287 (484)
133 3sxs_A Cytoplasmic tyrosine-pr 100.0 4.5E-39 1.5E-43 352.5 19.4 255 750-1025 7-263 (268)
134 3llt_A Serine/threonine kinase 100.0 5E-39 1.7E-43 368.3 20.6 262 748-1024 32-360 (360)
135 3gen_A Tyrosine-protein kinase 100.0 5.1E-39 1.8E-43 355.1 19.9 257 749-1026 22-280 (283)
136 3ork_A Serine/threonine protei 100.0 6.6E-40 2.2E-44 367.4 12.8 260 750-1024 11-278 (311)
137 4eqm_A Protein kinase; transfe 100.0 4.5E-39 1.6E-43 357.3 18.9 259 750-1022 10-270 (294)
138 3rp9_A Mitogen-activated prote 100.0 6.5E-39 2.2E-43 379.5 21.5 267 750-1025 52-402 (458)
139 3dtc_A Mitogen-activated prote 100.0 3.9E-39 1.3E-43 353.7 18.1 252 750-1021 6-268 (271)
140 3mwu_A Calmodulin-domain prote 100.0 5.3E-39 1.8E-43 382.9 20.6 259 749-1025 20-282 (486)
141 3kul_A Ephrin type-A receptor 100.0 8.2E-39 2.8E-43 360.4 20.9 254 750-1022 48-309 (325)
142 3soc_A Activin receptor type-2 100.0 5.1E-39 1.7E-43 361.9 18.8 264 750-1023 23-315 (322)
143 3l9p_A Anaplastic lymphoma kin 100.0 3.9E-39 1.3E-43 369.3 18.1 260 750-1026 70-345 (367)
144 3vhe_A Vascular endothelial gr 100.0 2.5E-39 8.5E-44 370.8 16.5 265 743-1023 14-352 (359)
145 1t4h_A Serine/threonine-protei 100.0 1.2E-38 4E-43 353.6 21.2 255 751-1025 26-288 (290)
146 2clq_A Mitogen-activated prote 100.0 1.8E-38 6.1E-43 353.0 22.8 261 751-1027 22-286 (295)
147 3oz6_A Mitogen-activated prote 100.0 4.1E-39 1.4E-43 372.7 18.3 266 748-1025 6-334 (388)
148 1ua2_A CAK, cell division prot 100.0 7.4E-39 2.5E-43 364.5 20.0 271 748-1025 7-297 (346)
149 2vgo_A Serine/threonine-protei 100.0 5.4E-39 1.9E-43 355.1 18.3 254 750-1024 13-267 (284)
150 1u5q_A Serine/threonine protei 100.0 3.6E-39 1.2E-43 366.4 16.8 254 751-1025 54-311 (348)
151 1vzo_A Ribosomal protein S6 ki 100.0 3.1E-39 1.1E-43 368.5 16.3 263 750-1026 53-328 (355)
152 1o6v_A Internalin A; bacterial 100.0 2.1E-37 7.1E-42 367.5 32.6 346 172-596 44-389 (466)
153 3lij_A Calcium/calmodulin depe 100.0 7E-39 2.4E-43 382.5 20.0 258 750-1025 36-297 (494)
154 2h6d_A 5'-AMP-activated protei 100.0 8.2E-39 2.8E-43 352.1 19.0 256 750-1025 10-267 (276)
155 2jam_A Calcium/calmodulin-depe 100.0 7.2E-39 2.5E-43 357.8 18.8 256 750-1025 8-267 (304)
156 3q5i_A Protein kinase; CDPK, m 100.0 7.4E-39 2.5E-43 383.2 20.2 260 749-1024 34-306 (504)
157 2i1m_A Macrophage colony-stimu 100.0 2.2E-39 7.4E-44 367.1 14.7 264 746-1025 41-325 (333)
158 3eqc_A Dual specificity mitoge 100.0 7E-39 2.4E-43 367.1 19.0 265 750-1026 32-331 (360)
159 1o6v_A Internalin A; bacterial 100.0 2.8E-37 9.4E-42 366.4 33.4 359 133-548 31-389 (466)
160 1rjb_A FL cytokine receptor; k 100.0 3.8E-39 1.3E-43 366.9 16.6 264 748-1027 42-335 (344)
161 2w5a_A Serine/threonine-protei 100.0 5.5E-39 1.9E-43 354.0 17.1 261 750-1026 5-274 (279)
162 3n9x_A Phosphotransferase; mal 100.0 1E-38 3.5E-43 374.0 20.3 267 750-1025 25-367 (432)
163 3pfq_A PKC-B, PKC-beta, protei 100.0 7.7E-39 2.6E-43 393.6 20.1 258 749-1025 339-603 (674)
164 3mi9_A Cell division protein k 100.0 1.5E-38 5.1E-43 363.0 21.0 266 750-1025 16-317 (351)
165 2ycf_A Serine/threonine-protei 100.0 8.6E-39 2.9E-43 360.3 18.7 270 749-1033 8-288 (322)
166 3fme_A Dual specificity mitoge 100.0 6.2E-39 2.1E-43 355.8 17.0 262 750-1026 6-273 (290)
167 3cbl_A C-FES, proto-oncogene t 100.0 5.2E-39 1.8E-43 369.8 16.7 255 749-1022 112-370 (377)
168 2qol_A Ephrin receptor; recept 100.0 1.4E-38 4.7E-43 365.2 19.9 254 750-1022 44-305 (373)
169 2r3i_A Cell division protein k 100.0 1.5E-38 5.2E-43 354.3 19.4 266 751-1024 3-288 (299)
170 3tt0_A Basic fibroblast growth 100.0 2.4E-38 8.2E-43 365.2 21.4 257 749-1022 67-348 (382)
171 3ugc_A Tyrosine-protein kinase 100.0 1.2E-38 4.1E-43 354.4 18.2 263 750-1024 9-289 (295)
172 1luf_A Muscle-specific tyrosin 100.0 1.6E-38 5.5E-43 361.6 19.4 261 748-1025 44-334 (343)
173 1x8b_A WEE1HU, WEE1-like prote 100.0 2.1E-38 7E-43 351.1 19.4 253 750-1025 10-285 (289)
174 3com_A Serine/threonine-protei 100.0 2.1E-38 7E-43 355.9 19.6 258 749-1026 27-285 (314)
175 1cm8_A Phosphorylated MAP kina 100.0 2.2E-38 7.6E-43 362.8 19.9 261 750-1025 24-313 (367)
176 3nsz_A CK II alpha, casein kin 100.0 3.8E-38 1.3E-42 356.4 21.5 259 750-1025 35-325 (330)
177 1phk_A Phosphorylase kinase; g 100.0 3.2E-38 1.1E-42 351.6 20.0 265 748-1027 14-291 (298)
178 2ivs_A Proto-oncogene tyrosine 100.0 3.2E-38 1.1E-42 354.3 20.2 257 749-1022 21-307 (314)
179 2wtk_C Serine/threonine-protei 100.0 3.4E-38 1.2E-42 352.5 20.3 260 749-1025 3-269 (305)
180 1t46_A HOMO sapiens V-KIT hard 100.0 2.6E-38 8.8E-43 354.9 19.3 258 749-1022 21-303 (313)
181 3byv_A Rhoptry kinase; malaria 100.0 3.2E-39 1.1E-43 371.9 12.2 251 750-1025 72-365 (377)
182 2j7t_A Serine/threonine-protei 100.0 9E-39 3.1E-43 356.7 15.4 259 749-1025 17-281 (302)
183 2vwi_A Serine/threonine-protei 100.0 6.3E-39 2.2E-43 358.1 14.0 269 748-1027 12-295 (303)
184 2xrw_A Mitogen-activated prote 100.0 2.6E-38 8.9E-43 363.3 19.3 263 750-1025 24-324 (371)
185 3q60_A ROP5B; pseudokinase, tr 100.0 1.2E-38 4E-43 366.5 15.9 263 750-1026 61-359 (371)
186 2x7f_A TRAF2 and NCK-interacti 100.0 1.8E-38 6.2E-43 358.4 17.2 259 748-1025 21-292 (326)
187 2eva_A TAK1 kinase - TAB1 chim 100.0 5.4E-38 1.8E-42 351.0 20.6 251 751-1022 8-259 (307)
188 4f0f_A Serine/threonine-protei 100.0 1.6E-37 5.5E-42 343.8 24.0 254 750-1021 18-284 (287)
189 3kvw_A DYRK2, dual specificity 100.0 2.3E-38 8E-43 370.2 18.1 263 750-1026 96-415 (429)
190 4eut_A Serine/threonine-protei 100.0 4E-38 1.4E-42 365.0 19.9 267 750-1023 8-306 (396)
191 3kmu_A ILK, integrin-linked ki 100.0 3.5E-38 1.2E-42 345.9 18.1 251 750-1022 9-266 (271)
192 1qcf_A Haematopoetic cell kina 100.0 2.8E-38 9.5E-43 372.8 18.0 252 749-1021 186-439 (454)
193 1p4o_A Insulin-like growth fac 100.0 1.4E-38 4.9E-43 358.6 14.8 267 743-1026 17-299 (322)
194 3an0_A Dual specificity mitoge 100.0 2.2E-38 7.6E-43 359.9 16.3 261 749-1025 49-316 (340)
195 2wei_A Calmodulin-domain prote 100.0 5.7E-38 1.9E-42 347.5 19.2 260 748-1025 19-282 (287)
196 3qup_A Tyrosine-protein kinase 100.0 4.7E-38 1.6E-42 354.5 18.4 255 749-1019 21-291 (323)
197 3pg1_A Mitogen-activated prote 100.0 1.3E-37 4.4E-42 356.9 22.1 274 743-1025 14-322 (362)
198 2izr_A Casein kinase I isoform 100.0 5.9E-38 2E-42 354.7 18.9 254 750-1021 8-276 (330)
199 3t9t_A Tyrosine-protein kinase 100.0 5.1E-38 1.7E-42 343.9 17.8 254 750-1024 7-262 (267)
200 2fst_X Mitogen-activated prote 100.0 2.6E-38 8.9E-43 361.8 16.2 261 750-1025 28-317 (367)
201 2pvf_A Fibroblast growth facto 100.0 9.4E-38 3.2E-42 353.7 20.4 257 749-1022 33-314 (334)
202 2wqm_A Serine/threonine-protei 100.0 1.2E-37 4.2E-42 348.9 21.1 264 749-1024 30-295 (310)
203 1mp8_A Focal adhesion kinase 1 100.0 9.2E-38 3.2E-42 344.6 19.8 257 749-1025 13-275 (281)
204 3poz_A Epidermal growth factor 100.0 4.7E-38 1.6E-42 354.8 17.8 255 750-1024 14-276 (327)
205 2pml_X PFPK7, Ser/Thr protein 100.0 5.7E-38 1.9E-42 357.8 18.6 271 750-1028 30-331 (348)
206 3kfa_A Tyrosine-protein kinase 100.0 4.5E-38 1.5E-42 348.5 17.2 260 748-1027 10-272 (288)
207 3kex_A Receptor tyrosine-prote 100.0 5E-38 1.7E-42 354.4 17.8 255 751-1025 13-275 (325)
208 3cek_A Dual specificity protei 100.0 9.1E-38 3.1E-42 350.4 19.8 259 749-1026 26-299 (313)
209 1zy4_A Serine/threonine-protei 100.0 1.5E-37 5E-42 346.9 21.1 262 749-1030 4-294 (303)
210 2xir_A Vascular endothelial gr 100.0 6.7E-38 2.3E-42 352.1 18.3 266 743-1024 19-308 (316)
211 4e7w_A Glycogen synthase kinas 100.0 5.7E-38 1.9E-42 363.1 18.2 263 750-1025 39-327 (394)
212 1k9a_A Carboxyl-terminal SRC k 100.0 1.2E-37 4.3E-42 366.6 21.1 247 750-1021 192-440 (450)
213 3og7_A AKAP9-BRAF fusion prote 100.0 1.4E-37 4.8E-42 344.6 20.2 259 749-1023 22-285 (289)
214 1u59_A Tyrosine-protein kinase 100.0 3.2E-37 1.1E-41 341.4 22.9 255 751-1025 9-271 (287)
215 3rgf_A Cyclin-dependent kinase 100.0 4E-38 1.4E-42 366.4 16.2 265 751-1025 20-339 (405)
216 1opk_A P150, C-ABL, proto-onco 100.0 6.7E-38 2.3E-42 373.1 18.4 253 750-1022 219-474 (495)
217 3eb0_A Putative uncharacterize 100.0 1.5E-37 5.1E-42 358.8 20.6 265 747-1025 3-327 (383)
218 3mdy_A Bone morphogenetic prot 100.0 4.8E-37 1.6E-41 348.5 24.4 262 747-1023 33-328 (337)
219 1wak_A Serine/threonine-protei 100.0 1.4E-37 4.7E-42 361.6 20.3 263 750-1024 36-396 (397)
220 2id5_A Lingo-1, leucine rich r 100.0 5.5E-37 1.9E-41 365.4 25.9 323 105-454 14-336 (477)
221 3qyz_A Mitogen-activated prote 100.0 1.1E-37 3.8E-42 357.4 19.0 264 749-1025 25-319 (364)
222 4fvq_A Tyrosine-protein kinase 100.0 9.4E-38 3.2E-42 346.1 17.7 249 750-1024 7-273 (289)
223 4exu_A Mitogen-activated prote 100.0 1.5E-37 5E-42 357.1 19.5 260 750-1025 41-329 (371)
224 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 8.3E-38 2.9E-42 368.3 17.8 252 749-1021 182-435 (452)
225 3lxp_A Non-receptor tyrosine-p 100.0 2.4E-37 8.3E-42 347.6 20.7 257 753-1022 33-306 (318)
226 3gxj_A TGF-beta receptor type- 100.0 5.1E-39 1.7E-43 358.9 6.9 256 750-1023 2-294 (303)
227 2yfx_A Tyrosine-protein kinase 100.0 1.5E-37 5E-42 351.1 18.7 260 750-1026 29-304 (327)
228 3c1x_A Hepatocyte growth facto 100.0 1E-37 3.6E-42 357.4 17.8 252 752-1022 90-351 (373)
229 2a19_B Interferon-induced, dou 100.0 1.9E-37 6.4E-42 342.7 19.1 249 749-1026 9-274 (284)
230 3lxl_A Tyrosine-protein kinase 100.0 9.8E-38 3.4E-42 352.5 17.1 262 751-1024 23-301 (327)
231 4e5w_A Tyrosine-protein kinase 100.0 2.1E-37 7.2E-42 345.6 19.0 260 751-1021 21-297 (302)
232 1b6c_B TGF-B superfamily recep 100.0 5.1E-37 1.8E-41 349.0 22.5 260 746-1023 37-333 (342)
233 2h34_A Serine/threonine-protei 100.0 1.9E-37 6.4E-42 347.0 18.4 258 749-1022 32-292 (309)
234 1z57_A Dual specificity protei 100.0 3.4E-37 1.2E-41 349.9 20.8 261 750-1025 13-334 (339)
235 2v62_A Serine/threonine-protei 100.0 9.6E-38 3.3E-42 355.1 16.1 265 750-1022 36-324 (345)
236 1csn_A Casein kinase-1; phosph 100.0 2E-37 6.7E-42 345.1 18.3 256 750-1022 9-279 (298)
237 1j1b_A Glycogen synthase kinas 100.0 7.7E-38 2.6E-42 365.0 15.5 261 751-1025 54-342 (420)
238 1qpc_A LCK kinase; alpha beta 100.0 1.1E-37 3.7E-42 343.7 15.9 252 749-1021 11-264 (279)
239 2b9h_A MAP kinase FUS3, mitoge 100.0 3.1E-37 1.1E-41 352.4 20.2 263 750-1025 10-311 (353)
240 1fvr_A Tyrosine-protein kinase 100.0 4E-37 1.4E-41 347.5 20.7 255 751-1023 25-297 (327)
241 3e3p_A Protein kinase, putativ 100.0 1.5E-37 5.1E-42 356.1 17.5 271 743-1025 15-320 (360)
242 3cc6_A Protein tyrosine kinase 100.0 4.5E-37 1.5E-41 339.1 20.5 256 749-1024 10-271 (281)
243 3op5_A Serine/threonine-protei 100.0 1.5E-37 5.2E-42 356.2 17.1 262 749-1021 33-324 (364)
244 3fhr_A MAP kinase-activated pr 100.0 2.1E-37 7.2E-42 350.7 17.9 259 749-1025 26-293 (336)
245 3aln_A Dual specificity mitoge 100.0 2.4E-37 8.2E-42 349.3 18.3 264 750-1026 21-292 (327)
246 1blx_A Cyclin-dependent kinase 100.0 2.1E-37 7.3E-42 349.6 17.8 269 748-1025 8-302 (326)
247 2vx3_A Dual specificity tyrosi 100.0 1.7E-37 6E-42 358.1 16.9 264 749-1025 52-378 (382)
248 2i6l_A Mitogen-activated prote 100.0 2.7E-37 9.4E-42 347.7 17.8 262 750-1025 10-311 (320)
249 2id5_A Lingo-1, leucine rich r 100.0 2.9E-36 9.8E-41 359.3 27.5 302 223-548 33-334 (477)
250 2buj_A Serine/threonine-protei 100.0 2.9E-37 9.8E-42 347.1 17.8 257 750-1022 28-302 (317)
251 3brb_A Proto-oncogene tyrosine 100.0 6.3E-37 2.2E-41 343.6 20.5 261 748-1024 31-306 (313)
252 3f66_A Hepatocyte growth facto 100.0 6.8E-37 2.3E-41 340.8 20.6 253 751-1022 25-287 (298)
253 1mqb_A Ephrin type-A receptor 100.0 5.6E-37 1.9E-41 346.8 20.1 253 751-1022 44-305 (333)
254 3coi_A Mitogen-activated prote 100.0 7.1E-37 2.4E-41 349.3 20.7 257 750-1025 23-311 (353)
255 2rio_A Serine/threonine-protei 100.0 6.8E-37 2.3E-41 358.5 20.7 257 752-1026 16-302 (434)
256 3lzb_A Epidermal growth factor 100.0 3.8E-37 1.3E-41 347.2 17.7 254 750-1023 14-275 (327)
257 3qa8_A MGC80376 protein; kinas 100.0 2E-37 6.7E-42 371.7 16.2 269 750-1025 13-303 (676)
258 3g2f_A Bone morphogenetic prot 100.0 4.9E-37 1.7E-41 348.2 18.6 260 750-1021 12-313 (336)
259 1xbb_A Tyrosine-protein kinase 100.0 6.9E-37 2.4E-41 339.5 19.0 254 749-1022 14-275 (291)
260 3pls_A Macrophage-stimulating 100.0 1.5E-36 5E-41 338.1 21.6 252 752-1022 22-283 (298)
261 3ll6_A Cyclin G-associated kin 100.0 4.5E-37 1.5E-41 348.7 17.6 253 750-1024 27-306 (337)
262 3a99_A Proto-oncogene serine/t 100.0 1.3E-37 4.6E-42 350.0 12.7 254 747-1026 39-300 (320)
263 2dyl_A Dual specificity mitoge 100.0 7.4E-37 2.5E-41 343.9 18.8 260 750-1026 24-290 (318)
264 3e7e_A HBUB1, BUB1A, mitotic c 100.0 4.3E-37 1.5E-41 352.7 17.1 247 749-1021 63-333 (365)
265 3p23_A Serine/threonine-protei 100.0 4.7E-37 1.6E-41 358.7 17.2 255 750-1026 23-290 (432)
266 2h8h_A Proto-oncogene tyrosine 100.0 2.8E-37 9.7E-42 371.0 15.7 252 749-1021 265-518 (535)
267 2jii_A Serine/threonine-protei 100.0 1.7E-37 5.9E-42 354.2 13.1 258 750-1022 41-332 (352)
268 1byg_A CSK, protein (C-termina 100.0 9.5E-37 3.3E-41 335.9 18.2 248 750-1022 20-269 (278)
269 2ozo_A Tyrosine-protein kinase 100.0 1.4E-36 4.7E-41 370.2 21.2 250 752-1021 336-593 (613)
270 1q8y_A SR protein kinase; tran 100.0 7.5E-37 2.6E-41 352.1 17.8 264 750-1025 18-339 (373)
271 2eu9_A Dual specificity protei 100.0 1.3E-36 4.4E-41 347.6 19.5 262 750-1026 18-340 (355)
272 2w1i_A JAK2; chromosomal rearr 100.0 9.5E-37 3.2E-41 344.2 18.0 265 750-1026 40-322 (326)
273 4hgt_A Casein kinase I isoform 100.0 3.7E-36 1.3E-40 334.5 22.4 257 748-1021 6-275 (296)
274 3uzp_A CKI-delta, CKID, casein 100.0 4E-36 1.4E-40 334.2 22.4 254 750-1021 8-275 (296)
275 2iwi_A Serine/threonine-protei 100.0 4.6E-37 1.6E-41 344.6 14.2 256 745-1026 25-290 (312)
276 1u46_A ACK-1, activated CDC42 100.0 1.1E-36 3.8E-41 337.8 16.7 256 750-1022 17-280 (291)
277 4fl3_A Tyrosine-protein kinase 100.0 2E-36 6.7E-41 369.6 20.0 247 757-1023 375-628 (635)
278 3o6n_A APL1; leucine-rich repe 100.0 7.5E-36 2.6E-40 345.8 23.9 312 100-453 43-354 (390)
279 4fcg_A Uncharacterized protein 100.0 2.4E-36 8.2E-41 340.1 14.7 284 22-331 22-314 (328)
280 3oja_B Anopheles plasmodium-re 100.0 2.2E-35 7.5E-40 360.8 24.1 312 100-453 49-360 (597)
281 2y4i_B KSR2, HKSR2, kinase sup 100.0 3.3E-36 1.1E-40 338.8 13.8 259 748-1026 30-302 (319)
282 3o6n_A APL1; leucine-rich repe 100.0 2.4E-35 8.2E-40 341.6 21.2 333 269-667 44-378 (390)
283 3sv0_A Casein kinase I-like; t 100.0 5.2E-35 1.8E-39 344.5 23.8 255 750-1021 6-273 (483)
284 2j0j_A Focal adhesion kinase 1 100.0 2.7E-35 9.3E-40 360.9 21.8 256 749-1024 388-649 (656)
285 3oja_B Anopheles plasmodium-re 100.0 3.7E-35 1.3E-39 358.8 20.8 334 269-668 50-385 (597)
286 3m2w_A MAP kinase-activated pr 100.0 6E-35 2.1E-39 325.1 16.4 237 750-1025 16-262 (299)
287 2vuw_A Serine/threonine-protei 100.0 1.9E-35 6.6E-40 334.9 11.8 252 750-1024 19-336 (336)
288 3dzo_A Rhoptry kinase domain; 100.0 1.3E-34 4.3E-39 337.0 16.0 251 750-1025 77-369 (413)
289 4fmz_A Internalin; leucine ric 100.0 1.7E-33 6E-38 320.5 25.0 307 98-451 40-346 (347)
290 1ogq_A PGIP-2, polygalacturona 100.0 6.7E-35 2.3E-39 326.4 12.9 253 126-381 50-307 (313)
291 2pzi_A Probable serine/threoni 100.0 2.8E-34 9.6E-39 355.8 18.5 241 750-1025 79-326 (681)
292 4fmz_A Internalin; leucine ric 100.0 1E-32 3.5E-37 314.1 28.4 285 148-453 42-326 (347)
293 3uqc_A Probable conserved tran 100.0 7.7E-34 2.6E-38 313.2 15.7 231 751-1023 31-262 (286)
294 2ft3_A Biglycan; proteoglycan, 100.0 1.8E-32 6.2E-37 309.9 25.6 249 128-387 35-285 (332)
295 2ft3_A Biglycan; proteoglycan, 100.0 2.7E-32 9.1E-37 308.5 25.7 289 149-448 32-330 (332)
296 1xku_A Decorin; proteoglycan, 100.0 4.2E-32 1.4E-36 306.7 25.3 199 102-306 52-252 (330)
297 1xku_A Decorin; proteoglycan, 100.0 9.3E-32 3.2E-36 303.8 25.6 250 103-386 32-283 (330)
298 1z7x_W Ribonuclease inhibitor; 100.0 3.9E-35 1.3E-39 348.1 -11.6 355 222-596 3-412 (461)
299 1z7x_W Ribonuclease inhibitor; 100.0 1.3E-34 4.4E-39 343.6 -7.8 377 246-643 3-440 (461)
300 2z80_A TOLL-like receptor 2, v 100.0 2.3E-31 7.9E-36 303.5 11.9 283 62-381 27-316 (353)
301 2z66_A Variable lymphocyte rec 100.0 1.1E-30 3.7E-35 291.8 12.9 286 63-389 5-297 (306)
302 3ogk_B Coronatine-insensitive 100.0 6.8E-33 2.3E-37 339.8 -9.8 448 64-543 41-547 (592)
303 2z80_A TOLL-like receptor 2, v 100.0 8E-30 2.7E-34 290.8 15.2 274 106-406 35-317 (353)
304 2z66_A Variable lymphocyte rec 100.0 1E-29 3.4E-34 283.9 15.1 283 106-414 11-298 (306)
305 3ogk_B Coronatine-insensitive 100.0 5.6E-32 1.9E-36 331.7 -3.9 232 165-398 64-326 (592)
306 4fcg_A Uncharacterized protein 100.0 3.6E-29 1.2E-33 281.5 18.8 235 125-379 80-314 (328)
307 1wwl_A Monocyte differentiatio 100.0 8E-31 2.7E-35 293.3 3.7 251 101-380 42-310 (312)
308 3g06_A SSPH2 (leucine-rich rep 100.0 1.1E-28 3.8E-33 298.3 18.0 265 103-435 41-305 (622)
309 1wwl_A Monocyte differentiatio 100.0 7.3E-30 2.5E-34 285.5 5.5 250 123-405 40-311 (312)
310 1ozn_A Reticulon 4 receptor; N 100.0 3.4E-28 1.2E-32 268.5 18.0 207 101-307 31-238 (285)
311 1ozn_A Reticulon 4 receptor; N 100.0 2.7E-28 9.2E-33 269.3 16.8 225 129-380 14-239 (285)
312 3zyi_A Leucine-rich repeat-con 100.0 1.1E-27 3.8E-32 282.7 22.2 225 151-377 76-301 (452)
313 4azs_A Methyltransferase WBDD; 100.0 2.3E-29 7.9E-34 302.5 6.9 188 759-956 242-437 (569)
314 3zyj_A Leucine-rich repeat-con 100.0 1.8E-27 6E-32 279.9 22.7 224 177-402 67-291 (440)
315 3zyi_A Leucine-rich repeat-con 100.0 1.5E-27 5E-32 281.6 21.7 248 152-427 56-303 (452)
316 3zyj_A Leucine-rich repeat-con 99.9 3.1E-27 1.1E-31 277.8 23.0 249 176-453 45-294 (440)
317 3o53_A Protein LRIM1, AGAP0063 99.9 4.4E-29 1.5E-33 279.8 2.0 257 104-374 12-270 (317)
318 3o53_A Protein LRIM1, AGAP0063 99.9 6.5E-29 2.2E-33 278.5 2.9 258 127-398 11-270 (317)
319 2o6q_A Variable lymphocyte rec 99.9 4.1E-26 1.4E-30 249.5 22.7 216 62-306 2-217 (270)
320 3g06_A SSPH2 (leucine-rich rep 99.9 3E-25 1E-29 268.3 29.2 269 126-462 40-308 (622)
321 3oja_A Leucine-rich immune mol 99.9 1.2E-27 4.2E-32 283.8 6.9 235 126-398 34-270 (487)
322 2p1m_B Transport inhibitor res 99.9 4.4E-30 1.5E-34 314.9 -16.8 453 64-545 34-542 (594)
323 3oja_A Leucine-rich immune mol 99.9 7.1E-27 2.4E-31 277.2 10.7 235 366-638 34-270 (487)
324 2p1m_B Transport inhibitor res 99.9 7.9E-29 2.7E-33 303.8 -10.0 424 193-641 61-542 (594)
325 2z62_A TOLL-like receptor 4, v 99.9 4.3E-25 1.5E-29 242.4 18.7 211 439-650 29-244 (276)
326 3rfs_A Internalin B, repeat mo 99.9 1.5E-25 5E-30 245.3 13.7 225 103-340 20-244 (272)
327 2z62_A TOLL-like receptor 4, v 99.9 1.1E-24 3.6E-29 239.2 19.1 224 131-379 12-237 (276)
328 3rfs_A Internalin B, repeat mo 99.9 3.6E-25 1.2E-29 242.1 14.2 229 125-390 18-246 (272)
329 3m19_A Variable lymphocyte rec 99.9 3.7E-24 1.3E-28 231.2 19.1 192 63-285 3-194 (251)
330 2o6q_A Variable lymphocyte rec 99.9 1.1E-23 3.7E-28 230.2 22.2 179 177-379 40-218 (270)
331 1p9a_G Platelet glycoprotein I 99.9 2E-23 6.8E-28 230.2 19.2 202 146-378 6-207 (290)
332 1p9a_G Platelet glycoprotein I 99.9 2.3E-23 7.8E-28 229.7 19.6 203 121-330 5-207 (290)
333 3en9_A Glycoprotease, O-sialog 99.9 8.5E-25 2.9E-29 261.4 8.3 187 754-957 339-538 (540)
334 4glp_A Monocyte differentiatio 99.9 6.8E-24 2.3E-28 236.9 14.0 224 127-356 65-308 (310)
335 2ast_B S-phase kinase-associat 99.9 6.2E-26 2.1E-30 256.8 -3.7 267 64-364 36-315 (336)
336 3goz_A Leucine-rich repeat-con 99.9 1.9E-25 6.3E-30 255.3 -0.6 257 106-362 2-304 (362)
337 2xwt_C Thyrotropin receptor; s 99.9 6.9E-23 2.4E-27 219.5 15.7 178 103-283 32-218 (239)
338 3goz_A Leucine-rich repeat-con 99.9 1.7E-24 5.8E-29 247.4 3.3 251 371-645 3-299 (362)
339 4glp_A Monocyte differentiatio 99.9 1.4E-23 4.9E-28 234.2 10.7 225 151-380 65-308 (310)
340 2xwt_C Thyrotropin receptor; s 99.9 5.9E-23 2E-27 220.0 14.2 178 175-355 32-218 (239)
341 2ast_B S-phase kinase-associat 99.9 1.7E-24 5.8E-29 245.0 -0.2 233 150-387 70-314 (336)
342 2ca6_A RAN GTPase-activating p 99.9 3.4E-25 1.2E-29 255.7 -6.2 251 117-406 23-319 (386)
343 2o6s_A Variable lymphocyte rec 99.9 4.3E-22 1.5E-26 208.4 16.9 186 63-295 5-190 (208)
344 3m19_A Variable lymphocyte rec 99.9 8.2E-22 2.8E-26 212.7 19.6 178 127-307 15-192 (251)
345 2ca6_A RAN GTPase-activating p 99.9 4.3E-25 1.5E-29 254.9 -7.4 235 193-447 55-339 (386)
346 1h6u_A Internalin H; cell adhe 99.9 2.3E-22 7.8E-27 223.9 14.4 128 147-284 38-165 (308)
347 3cvr_A Invasion plasmid antige 99.9 1.1E-22 3.6E-27 242.9 11.8 188 104-319 61-255 (571)
348 1h6u_A Internalin H; cell adhe 99.9 5.1E-22 1.7E-26 221.1 16.0 192 124-331 39-230 (308)
349 4ay9_X Follicle-stimulating ho 99.9 6.9E-22 2.4E-26 224.5 16.5 180 127-307 31-215 (350)
350 4ay9_X Follicle-stimulating ho 99.9 4E-21 1.4E-25 218.2 19.0 100 320-424 156-256 (350)
351 2o6s_A Variable lymphocyte rec 99.9 8.4E-21 2.9E-25 198.5 17.7 172 151-333 29-200 (208)
352 1zar_A RIO2 kinase; serine kin 99.8 7.5E-22 2.6E-26 216.0 9.7 156 745-931 84-253 (282)
353 3cvr_A Invasion plasmid antige 99.8 3.5E-21 1.2E-25 229.8 16.0 211 48-295 32-255 (571)
354 4b8c_D Glucose-repressible alc 99.8 5.3E-22 1.8E-26 246.0 3.5 268 24-332 129-405 (727)
355 1dce_A Protein (RAB geranylger 99.8 7.6E-23 2.6E-27 245.7 -5.2 224 66-308 286-547 (567)
356 1m9s_A Internalin B; cell inva 99.8 3.2E-20 1.1E-24 224.2 12.4 189 103-307 22-210 (605)
357 3e6j_A Variable lymphocyte rec 99.8 2.5E-19 8.7E-24 190.0 16.8 135 126-261 40-174 (229)
358 1h6t_A Internalin B; cell adhe 99.8 1.1E-19 3.8E-24 200.4 13.3 172 99-284 43-214 (291)
359 1m9s_A Internalin B; cell inva 99.8 1.2E-19 4E-24 219.3 14.3 195 124-334 19-213 (605)
360 2v70_A SLIT-2, SLIT homolog 2 99.8 1.2E-19 4E-24 191.3 12.0 157 489-648 14-171 (220)
361 1h6t_A Internalin B; cell adhe 99.8 9.4E-20 3.2E-24 200.9 11.4 188 128-331 26-213 (291)
362 2v9t_B SLIT homolog 2 protein 99.8 1.3E-19 4.6E-24 190.8 11.7 155 489-646 14-168 (220)
363 2v70_A SLIT-2, SLIT homolog 2 99.8 6.3E-19 2.1E-23 185.7 14.7 153 105-284 14-167 (220)
364 2v9t_B SLIT homolog 2 protein 99.8 8.4E-19 2.9E-23 184.7 15.1 152 105-283 14-165 (220)
365 1dce_A Protein (RAB geranylger 99.8 1.2E-21 4.1E-26 235.3 -8.6 205 146-373 345-567 (567)
366 3e6j_A Variable lymphocyte rec 99.8 7.2E-19 2.5E-23 186.5 13.8 156 488-647 21-176 (229)
367 2xot_A Amphoterin-induced prot 99.8 5E-19 1.7E-23 201.8 12.2 175 105-282 21-201 (361)
368 2xot_A Amphoterin-induced prot 99.8 6.5E-19 2.2E-23 200.8 12.0 154 129-285 21-178 (361)
369 4b8c_D Glucose-repressible alc 99.8 2.6E-19 8.9E-24 221.9 6.5 224 102-356 173-405 (727)
370 1xeu_A Internalin C; cellular 99.8 8.1E-19 2.8E-23 190.2 8.5 146 125-283 18-163 (263)
371 4ezg_A Putative uncharacterize 99.7 2E-18 6.8E-23 178.6 10.5 152 124-283 42-194 (197)
372 1xeu_A Internalin C; cellular 99.7 1.1E-18 3.8E-23 189.2 8.3 170 148-356 17-186 (263)
373 4ezg_A Putative uncharacterize 99.7 3.2E-18 1.1E-22 177.1 9.9 153 147-307 41-194 (197)
374 3sb4_A Hypothetical leucine ri 99.7 1.5E-18 5.2E-23 195.2 6.6 218 413-637 100-328 (329)
375 3sb4_A Hypothetical leucine ri 99.7 2.8E-18 9.6E-23 193.0 6.4 294 141-468 14-327 (329)
376 1w8a_A SLIT protein; signaling 99.7 1E-17 3.6E-22 172.3 9.4 129 489-620 11-140 (192)
377 1zth_A RIO1 serine protein kin 99.7 1.8E-17 6.3E-22 179.0 11.2 142 751-907 47-219 (258)
378 1w8a_A SLIT protein; signaling 99.7 1.6E-16 5.5E-21 163.4 12.7 92 194-285 50-141 (192)
379 2ell_A Acidic leucine-rich nuc 99.7 2E-16 6.9E-21 158.9 10.8 108 126-235 24-133 (168)
380 4fdw_A Leucine rich hypothetic 99.6 1.5E-15 5.2E-20 174.3 18.2 262 342-640 113-380 (401)
381 2ell_A Acidic leucine-rich nuc 99.6 3.7E-16 1.3E-20 157.1 11.1 133 149-283 23-160 (168)
382 2je0_A Acidic leucine-rich nuc 99.6 2.4E-16 8.3E-21 154.9 7.8 128 101-230 16-148 (149)
383 4fdw_A Leucine rich hypothetic 99.6 3.7E-15 1.3E-19 171.0 18.4 272 316-619 111-383 (401)
384 2wfh_A SLIT homolog 2 protein 99.6 1.9E-15 6.5E-20 155.3 13.2 127 129-283 13-139 (193)
385 2je0_A Acidic leucine-rich nuc 99.6 3.3E-16 1.1E-20 153.9 6.9 127 126-278 17-148 (149)
386 2wfh_A SLIT homolog 2 protein 99.6 2.2E-15 7.5E-20 154.8 13.3 127 105-235 13-139 (193)
387 2o6r_A Variable lymphocyte rec 99.6 1.1E-15 3.9E-20 154.9 10.8 132 513-647 10-141 (177)
388 2o6r_A Variable lymphocyte rec 99.6 4.2E-15 1.4E-19 150.7 14.2 112 175-286 29-140 (177)
389 4gyi_A RIO2 kinase; protein ki 99.6 5.3E-16 1.8E-20 173.3 4.9 144 748-907 92-265 (397)
390 4fs7_A Uncharacterized protein 99.6 2.9E-14 1E-18 164.4 18.8 330 214-610 63-392 (394)
391 1ds9_A Outer arm dynein; leuci 99.6 2.1E-17 7.3E-22 171.0 -7.7 153 100-283 16-185 (198)
392 1ds9_A Outer arm dynein; leuci 99.6 9.6E-17 3.3E-21 166.1 -3.7 153 485-644 17-186 (198)
393 4fs7_A Uncharacterized protein 99.5 1.2E-13 4E-18 159.3 21.0 327 193-562 66-392 (394)
394 1a9n_A U2A', U2A'; complex (nu 99.5 7.1E-15 2.4E-19 148.8 7.7 105 535-643 43-153 (176)
395 1a9n_A U2A', U2A'; complex (nu 99.5 1.6E-14 5.5E-19 146.2 7.6 131 147-283 16-153 (176)
396 3g39_A Variable lymphocyte rec 99.5 8E-14 2.7E-18 140.0 9.3 108 537-647 12-119 (170)
397 3g39_A Variable lymphocyte rec 99.4 5.8E-13 2E-17 133.7 12.2 86 198-283 30-115 (170)
398 2r9u_A Variable lymphocyte rec 99.4 9.7E-13 3.3E-17 132.5 12.1 86 198-283 33-118 (174)
399 2r9u_A Variable lymphocyte rec 99.4 1.2E-12 4E-17 131.9 12.4 104 154-260 16-119 (174)
400 4gt6_A Cell surface protein; l 99.3 2.2E-11 7.5E-16 140.2 18.8 330 263-641 56-389 (394)
401 4gt6_A Cell surface protein; l 99.3 5.7E-11 2E-15 136.7 21.4 331 215-594 56-390 (394)
402 3un9_A NLR family member X1; l 99.3 5E-14 1.7E-18 160.0 -5.7 141 486-626 101-259 (372)
403 3un9_A NLR family member X1; l 99.3 1.3E-13 4.4E-18 156.6 -2.4 160 485-644 71-253 (372)
404 2ifg_A High affinity nerve gro 99.2 8.7E-12 3E-16 141.0 7.6 102 491-595 13-116 (347)
405 2ifg_A High affinity nerve gro 99.2 2.5E-11 8.4E-16 137.3 9.9 92 190-283 24-116 (347)
406 3tm0_A Aminoglycoside 3'-phosp 99.2 7.7E-11 2.6E-15 127.5 11.7 148 745-905 8-212 (263)
407 4h09_A Hypothetical leucine ri 99.1 4.8E-09 1.6E-13 119.9 22.1 316 240-605 40-355 (379)
408 4h09_A Hypothetical leucine ri 99.0 2E-08 6.8E-13 114.8 23.5 131 335-469 210-340 (379)
409 3rw6_A Nuclear RNA export fact 99.0 3.8E-12 1.3E-16 135.6 -8.3 123 63-187 76-209 (267)
410 1nd4_A Aminoglycoside 3'-phosp 99.0 5.1E-10 1.8E-14 120.8 6.9 137 751-905 20-213 (264)
411 3dxp_A Putative acyl-COA dehyd 98.8 6.8E-09 2.3E-13 117.7 11.0 144 754-906 41-248 (359)
412 2ra8_A Uncharacterized protein 98.8 1.9E-09 6.7E-14 121.1 5.0 85 532-617 250-341 (362)
413 2ra8_A Uncharacterized protein 98.8 9.7E-10 3.3E-14 123.5 1.7 211 126-377 107-341 (362)
414 3sg8_A APH(2'')-ID; antibiotic 98.7 5.2E-09 1.8E-13 115.6 4.7 182 756-956 25-286 (304)
415 3r70_A Aminoglycoside phosphot 98.5 2.3E-07 7.7E-12 103.2 11.6 138 752-908 38-239 (320)
416 3rw6_A Nuclear RNA export fact 98.5 2.7E-08 9.2E-13 105.9 0.8 80 555-636 167-257 (267)
417 1io0_A Tropomodulin; LRR prote 98.4 2E-08 6.9E-13 101.8 -1.3 17 483-499 33-50 (185)
418 1io0_A Tropomodulin; LRR prote 98.4 5E-08 1.7E-12 98.9 1.2 116 504-619 30-164 (185)
419 4gkh_A Aminoglycoside 3'-phosp 98.2 5.8E-06 2E-10 89.3 11.3 134 758-905 31-222 (272)
420 3tdw_A Gentamicin resistance p 98.1 1.2E-05 4E-10 88.5 12.9 137 756-907 24-225 (306)
421 3d1u_A Putative fructosamine-3 98.1 8.3E-06 2.9E-10 88.6 9.5 78 753-838 17-97 (288)
422 3ovc_A Hygromycin-B 4-O-kinase 98.0 2.9E-05 9.8E-10 87.4 12.4 78 752-839 42-122 (362)
423 3e4g_A ATP synthase subunit S, 97.8 3.3E-06 1.1E-10 83.1 0.7 83 535-617 62-150 (176)
424 3e4g_A ATP synthase subunit S, 97.7 8.4E-06 2.9E-10 80.2 1.8 83 486-568 61-149 (176)
425 3ats_A Putative uncharacterize 97.7 0.00014 4.6E-09 82.0 11.8 83 756-839 25-121 (357)
426 2olc_A MTR kinase, methylthior 97.7 0.00011 3.7E-09 84.1 10.7 79 756-836 35-120 (397)
427 2q83_A YTAA protein; 2635576, 97.6 8.5E-05 2.9E-09 83.0 8.6 140 757-905 38-251 (346)
428 3jr1_A Putative fructosamine-3 97.5 0.00056 1.9E-08 74.7 12.4 77 754-838 39-118 (312)
429 2pyw_A Uncharacterized protein 97.3 0.00085 2.9E-08 77.2 12.4 77 876-954 232-313 (420)
430 1pgv_A TMD-1, tropomodulin TMD 97.3 6.4E-05 2.2E-09 75.4 2.3 63 485-547 40-111 (197)
431 1pgv_A TMD-1, tropomodulin TMD 97.2 4.8E-05 1.6E-09 76.3 -0.1 67 506-572 37-112 (197)
432 3f7w_A Putative fructosamine-3 97.2 0.00065 2.2E-08 73.7 8.6 80 751-838 15-97 (288)
433 3rfe_A Platelet glycoprotein I 97.0 0.00092 3.1E-08 62.7 6.2 60 585-646 11-71 (130)
434 1zyl_A Hypothetical protein YI 96.9 0.0079 2.7E-07 66.4 13.9 158 741-906 11-223 (328)
435 3csv_A Aminoglycoside phosphot 96.8 0.0026 8.8E-08 70.6 9.0 31 876-906 183-217 (333)
436 2ppq_A HSK, HK, homoserine kin 96.6 0.022 7.5E-07 62.5 15.0 158 741-905 7-216 (322)
437 3dxq_A Choline/ethanolamine ki 96.4 0.0055 1.9E-07 66.8 8.5 74 753-838 20-95 (301)
438 3rfe_A Platelet glycoprotein I 96.3 0.0047 1.6E-07 57.8 6.0 55 202-258 12-67 (130)
439 1nw1_A Choline kinase (49.2 KD 96.3 0.0044 1.5E-07 71.1 7.0 73 756-838 78-159 (429)
440 3feg_A Choline/ethanolamine ki 96.1 0.016 5.5E-07 64.9 10.0 141 756-905 55-253 (379)
441 2qg7_A Ethanolamine kinase PV0 95.9 0.02 6.7E-07 66.1 9.8 74 756-838 113-188 (458)
442 3i1a_A Spectinomycin phosphotr 95.8 0.058 2E-06 59.7 12.7 31 876-906 206-236 (339)
443 2yle_A Protein spire homolog 1 95.6 0.05 1.7E-06 54.7 9.9 103 836-956 33-135 (229)
444 3c5i_A Choline kinase; choline 95.6 0.01 3.5E-07 66.8 5.7 74 756-838 38-121 (369)
445 3f2s_A CK, chetk-alpha, cholin 94.8 0.062 2.1E-06 60.4 9.0 145 757-905 58-279 (401)
446 3mes_A Choline kinase; malaria 92.9 0.12 4.2E-06 58.6 6.7 74 756-838 75-157 (424)
447 2ks1_B Epidermal growth factor 89.8 0.076 2.6E-06 38.2 0.5 27 690-716 13-40 (44)
448 2l2t_A Receptor tyrosine-prote 88.1 0.084 2.9E-06 37.8 -0.2 27 690-716 12-39 (44)
449 2jwa_A Receptor tyrosine-prote 85.4 0.16 5.6E-06 36.2 0.0 26 690-715 14-39 (44)
450 3g15_A CK, chetk-alpha, cholin 84.0 1.8 6.1E-05 48.8 7.8 29 877-905 245-279 (401)
451 4ann_A ESSB; membrane protein, 82.8 1.9 6.3E-05 43.3 6.4 117 808-958 42-158 (215)
452 4ano_A ESSB; membrane protein, 82.7 2.5 8.7E-05 42.5 7.4 115 809-958 48-163 (219)
453 2k9y_A Ephrin type-A receptor 74.4 0.99 3.4E-05 32.1 1.0 24 691-714 17-40 (41)
454 3cxl_A N-chimerin; SH2, RHO-GA 66.6 0.68 2.3E-05 53.3 -2.0 62 755-821 146-214 (463)
455 1iij_A ERBB-2 receptor protein 63.5 1.7 5.9E-05 29.3 0.3 25 690-714 10-34 (35)
456 2l8s_A Integrin alpha-1; trans 61.9 1.4 4.6E-05 33.0 -0.4 18 686-703 9-26 (54)
457 2knc_A Integrin alpha-IIB; tra 55.7 1.9 6.5E-05 32.4 -0.6 19 685-703 11-29 (54)
458 2k1a_A Integrin alpha-IIB; sin 52.5 4.4 0.00015 28.7 0.9 18 685-702 9-26 (42)
459 2l9u_A Receptor tyrosine-prote 51.0 1.8 6.2E-05 28.5 -1.2 28 688-715 7-34 (40)
460 2k1k_A Ephrin type-A receptor 43.8 6.9 0.00024 27.1 0.8 6 708-713 32-37 (38)
461 3ls8_A Phosphatidylinositol 3- 34.9 4.6E+02 0.016 30.5 14.7 46 853-905 454-501 (614)
462 2x6h_A GH13170P, VPS34, phosph 34.0 4.4E+02 0.015 31.3 14.5 25 881-905 551-575 (696)
463 2lz0_A Uncharacterized protein 33.7 56 0.0019 28.1 5.2 43 426-469 8-50 (100)
464 2l6w_A Beta-type platelet-deri 39.3 9.1 0.00031 26.3 0.0 17 699-715 20-36 (39)
465 2lz0_A Uncharacterized protein 31.6 64 0.0022 27.7 5.2 44 570-614 8-51 (100)
466 2ks1_B Epidermal growth factor 21.2 35 0.0012 24.5 1.2 30 688-717 15-44 (44)
467 3hhm_A Phosphatidylinositol-4, 21.1 2.9E+02 0.0098 34.7 10.1 60 837-905 899-961 (1091)
468 2l2t_A Receptor tyrosine-prote 21.0 37 0.0013 24.3 1.3 28 690-717 16-43 (44)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.3e-89 Score=863.00 Aligned_cols=640 Identities=30% Similarity=0.474 Sum_probs=571.1
Q ss_pred cccCCCHHHHHHHHHHHHhcCCCCCCccccCCCCCCCCCCCCCCCCcccceEeeCCCCeEEEeccCccccCCc---ccC-
Q 039595 20 NVTSDSSAEACALLNWKTSLQNQNLNSSLLSSWTLYPTNASKISPCSWFGISCNHAGSRVISINLSTLCLNGT---FQD- 95 (1078)
Q Consensus 20 ~~~~~~~~~~~all~~k~~~~~~~~~~~~l~sW~~~~~~~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~---~~~- 95 (1078)
+++.+.++||+|||+||+++.++ . .++||+. ++|||+|.||+|+ ++||+.++|++.++.|. +++
T Consensus 5 ~~~~~~~~~~~all~~k~~~~~~---~-~l~~W~~------~~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~ 72 (768)
T 3rgz_A 5 SPSQSLYREIHQLISFKDVLPDK---N-LLPDWSS------NKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSS 72 (768)
T ss_dssp ---CCHHHHHHHHHHHHTTCSCT---T-SSTTCCT------TSCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHH
T ss_pred ccccCCHHHHHHHHHHHhhCCCc---c-cccCCCC------CCCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChh
Confidence 34445689999999999999732 3 7999972 4789999999998 68999999999999887 442
Q ss_pred ---------------------CccCCCCCCcEEeccCCcccccCCC--CCCCCCCcceeccCCCccCCCCCccc-cCccc
Q 039595 96 ---------------------FSFSSFPHLVNLNLSFNLFFGNIPP--QIGNLSKLQNLDLGNNQLSGVISPEI-GKLNQ 151 (1078)
Q Consensus 96 ---------------------~~~~~l~~L~~L~L~~n~~~~~~p~--~~~~l~~L~~L~Ls~n~l~~~~p~~~-~~l~~ 151 (1078)
..++++++|++|||++|.+.|.+|. .++++++|++|||++|.+++.+|..+ +++++
T Consensus 73 l~~L~~L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~ 152 (768)
T 3rgz_A 73 LLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNS 152 (768)
T ss_dssp TTTCTTCCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTT
T ss_pred HhccCcccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCC
Confidence 4677888889999999988888888 88888999999999988888888776 78888
Q ss_pred eeEEEccCccCCCCCCcc---cccccccceeecccccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeee
Q 039595 152 LRRLYLDMNQLHGTIPPV---IGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLD 228 (1078)
Q Consensus 152 L~~L~L~~n~l~~~~p~~---i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 228 (1078)
|++|+|++|++++..|.. ++.+++|++|++++|.+++.+|. +++++|++|+|++|++++.+|. ++++++|++|+
T Consensus 153 L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~ 229 (768)
T 3rgz_A 153 LEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLD 229 (768)
T ss_dssp CSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEE
T ss_pred CCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEE
Confidence 999999988888877776 78888888888888888877664 7889999999999999888887 89999999999
Q ss_pred cCCcccCCCCCCcccCCCCCcEEeccccccCCCCCcccCCCcccceeecccccccCccccccccc-cCCceeeecccCCC
Q 039595 229 LSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLDLIENQLSGSIPLSFGNL-SSWTLMSLFSNSLS 307 (1078)
Q Consensus 229 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~l~~n~l~ 307 (1078)
|++|++++.+|..|.++++|++|+|++|++++.+|.. .+++|++|+|++|+++|.+|..+... ++|+.|++++|.++
T Consensus 230 Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~ 307 (768)
T 3rgz_A 230 ISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFY 307 (768)
T ss_dssp CCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEE
T ss_pred CcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCC
Confidence 9999999888989999999999999999998877765 78899999999999998899888775 89999999999999
Q ss_pred CCCCccccCCCccCeeeccccccCccCCCC-CCCCCcCcEEEccCccCCCCCCccccccC-CCCeEEcccccCccccCCC
Q 039595 308 GSIPPILGNLKSLSTLGLYLNQLNGVIPPS-IGNLSSLRNLSLFNNGLYGSIPEEIGYLK-SLSELKLCKNNLSGVIPHS 385 (1078)
Q Consensus 308 ~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~-l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~ 385 (1078)
+.+|..|+++++|++|+|++|++++.+|.. +..+++|++|++++|.+.+.+|..+..++ +|++|++++|++++.+|..
T Consensus 308 ~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~ 387 (768)
T 3rgz_A 308 GAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPN 387 (768)
T ss_dssp ECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTT
T ss_pred CccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChh
Confidence 999999999999999999999998877765 88999999999999999988999998887 8999999999999888888
Q ss_pred Ccc--CCCCceeecccCcCCCCCCccccccCCCCeEEccCccccccchhhccCCCCCcEecCCCCccCCccCccccCCCC
Q 039595 386 VGN--LTGLVLLNMCENHLFGPIPKSLKSLTSLKRVRFNQNNLVGKVYEAFGDHPNLTFLDLSQNNFDGKISFNWRNLPK 463 (1078)
Q Consensus 386 ~~~--l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 463 (1078)
+.. +++|++|++++|++++.+|..+..+++|++|++++|.+.+..+..|..+++|+.|++++|.+.+..+..+..+++
T Consensus 388 ~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~ 467 (768)
T 3rgz_A 388 LCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKT 467 (768)
T ss_dssp TTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTT
T ss_pred hhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCC
Confidence 877 888999999999999999999999999999999999999888899999999999999999999988889999999
Q ss_pred CceecccccccCCCCCccccCCCcccEEeccCCccCCCcccccccCccCcEEeccCCccCCCcccccccccccceeeccC
Q 039595 464 LDTFIVSMNNIFGSIPLEIGDSSKLQFLDLSSNHIVGKIPVQLEKLFSLNKLILSLNQLSGSVPLEFGSLTELQYLDLSA 543 (1078)
Q Consensus 464 L~~L~l~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 543 (1078)
|++|++++|++++.+|..++.+++|++|+|++|++++.+|.+++.+++|++|+|++|++++.+|..+..+++|++|+|++
T Consensus 468 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~ 547 (768)
T 3rgz_A 468 LETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNT 547 (768)
T ss_dssp CCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCS
T ss_pred ceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCccc---------------------------------------------------------------------
Q 039595 544 NKLSSSIPKSI--------------------------------------------------------------------- 554 (1078)
Q Consensus 544 N~l~~~~~~~~--------------------------------------------------------------------- 554 (1078)
|++++.+|..+
T Consensus 548 N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~ 627 (768)
T 3rgz_A 548 NLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPT 627 (768)
T ss_dssp SEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCS
T ss_pred CccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchh
Confidence 99987766543
Q ss_pred -ccccccccccccCcccccccchhhhcccccCeeecCCCccCCcCCCCcccccccceeeccCccccCCcccccccCCcCc
Q 039595 555 -GNLLKLYYLNLSNNQFSHTIPIEFEKLIHLSKLDLSHNILQEEIPPQVCNMESLEKLNLSHNNLSGFIPRCFEKMRSLS 633 (1078)
Q Consensus 555 -~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~ 633 (1078)
..+++|++|+|++|++++.+|..|+.+++|+.|+|++|++++.+|..++++++|++|||++|+++|.+|..+..+++|+
T Consensus 628 ~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~ 707 (768)
T 3rgz_A 628 FDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLT 707 (768)
T ss_dssp CSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCS
T ss_pred hhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCC
Confidence 3457899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcccCcCCCCCCCCcc---ccCccccCCCCcCCCcccccccccccC
Q 039595 634 CIDICYNELQGPIPNSTV---FKDGLMEGNKGLCGNFEAFSSCDAFMS 678 (1078)
Q Consensus 634 ~l~l~~N~l~~~~~~~~~---~~~~~~~~n~~lc~~~~~~~~~~~~~~ 678 (1078)
+||+++|+++|.||...+ ++...|.||+++||+|.. +|.+...
T Consensus 708 ~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~--~C~~~~~ 753 (768)
T 3rgz_A 708 EIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP--RCDPSNA 753 (768)
T ss_dssp EEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC--CCCSCC-
T ss_pred EEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCc--CCCCCcc
Confidence 999999999999998765 566789999999999865 7865543
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=4.3e-70 Score=687.44 Aligned_cols=561 Identities=33% Similarity=0.440 Sum_probs=515.6
Q ss_pred CeEEEeccCccccCCcccCC-ccCCCCCCcEEeccCCcccccCCCCC-CCCCCcceeccCCCccCCCCCcc---ccCccc
Q 039595 77 SRVISINLSTLCLNGTFQDF-SFSSFPHLVNLNLSFNLFFGNIPPQI-GNLSKLQNLDLGNNQLSGVISPE---IGKLNQ 151 (1078)
Q Consensus 77 ~~v~~l~l~~~~l~g~~~~~-~~~~l~~L~~L~L~~n~~~~~~p~~~-~~l~~L~~L~Ls~n~l~~~~p~~---~~~l~~ 151 (1078)
.+.+.|+|+++.+.|.++.. .++++++|++|+|++|.+.+.+|..+ +++++|++|||++|++++..|.. ++++++
T Consensus 100 ~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~ 179 (768)
T 3rgz_A 100 ASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGE 179 (768)
T ss_dssp TTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTT
T ss_pred CCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCC
Confidence 36677899999999887653 68999999999999999999998876 89999999999999999988877 899999
Q ss_pred eeEEEccCccCCCCCCcccccccccceeecccccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeeecCC
Q 039595 152 LRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQ 231 (1078)
Q Consensus 152 L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 231 (1078)
|++|++++|.+++.+|. +.+++|++|++++|.+++.+|. ++++++|++|+|++|++++.+|..++++++|++|+|++
T Consensus 180 L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~ 256 (768)
T 3rgz_A 180 LKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISS 256 (768)
T ss_dssp CCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCS
T ss_pred CCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCC
Confidence 99999999999987765 7899999999999999998887 99999999999999999999999999999999999999
Q ss_pred cccCCCCCCcccCCCCCcEEeccccccCCCCCcccCCC-cccceeecccccccCccccccccccCCceeeecccCCCCCC
Q 039595 232 NQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNL-KSLHQLDLIENQLSGSIPLSFGNLSSWTLMSLFSNSLSGSI 310 (1078)
Q Consensus 232 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~ 310 (1078)
|++++.+|.. .+++|++|+|++|++++.+|..+.++ ++|++|+|++|++++.+|..|+.+++|+.|++++|.++|.+
T Consensus 257 n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~i 334 (768)
T 3rgz_A 257 NQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGEL 334 (768)
T ss_dssp SCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEEC
T ss_pred CcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcC
Confidence 9999887765 88999999999999999899888775 99999999999999999999999999999999999999888
Q ss_pred Ccc-ccCCCccCeeeccccccCccCCCCCCCCC-cCcEEEccCccCCCCCCccccc--cCCCCeEEcccccCccccCCCC
Q 039595 311 PPI-LGNLKSLSTLGLYLNQLNGVIPPSIGNLS-SLRNLSLFNNGLYGSIPEEIGY--LKSLSELKLCKNNLSGVIPHSV 386 (1078)
Q Consensus 311 p~~-l~~l~~L~~L~L~~N~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~p~~~~~--l~~L~~L~L~~N~l~~~~p~~~ 386 (1078)
|.. ++++++|++|++++|++++.+|..+..++ +|+.|++++|.+.+.+|..+.. +++|++|++++|++++.+|..+
T Consensus 335 p~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l 414 (768)
T 3rgz_A 335 PMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTL 414 (768)
T ss_dssp CHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGG
T ss_pred CHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHH
Confidence 876 99999999999999999999999999887 9999999999999988888877 8899999999999999999999
Q ss_pred ccCCCCceeecccCcCCCCCCccccccCCCCeEEccCccccccchhhccCCCCCcEecCCCCccCCccCccccCCCCCce
Q 039595 387 GNLTGLVLLNMCENHLFGPIPKSLKSLTSLKRVRFNQNNLVGKVYEAFGDHPNLTFLDLSQNNFDGKISFNWRNLPKLDT 466 (1078)
Q Consensus 387 ~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 466 (1078)
.++++|++|++++|++++.+|..+..+++|++|++++|.+.+..+..+..+++|++|++++|++++..+..+..+++|++
T Consensus 415 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 494 (768)
T 3rgz_A 415 SNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNW 494 (768)
T ss_dssp GGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCE
T ss_pred hcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCE
Confidence 99999999999999999999999999999999999999999988899999999999999999999988889999999999
Q ss_pred ecccccccCCCCCccccCCCcccEEeccCCccCCCcccccccCccCcEEeccCCccCCCcccc-----------------
Q 039595 467 FIVSMNNIFGSIPLEIGDSSKLQFLDLSSNHIVGKIPVQLEKLFSLNKLILSLNQLSGSVPLE----------------- 529 (1078)
Q Consensus 467 L~l~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~----------------- 529 (1078)
|++++|++++.+|.+++.+++|++|+|++|++++.+|..+.++++|+.|++++|++++.+|..
T Consensus 495 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~ 574 (768)
T 3rgz_A 495 ISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKR 574 (768)
T ss_dssp EECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCE
T ss_pred EEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccc
Confidence 999999999999999999999999999999999999999999999999999999988766653
Q ss_pred -----------------------------------------------------cccccccceeeccCccccCCCCccccc
Q 039595 530 -----------------------------------------------------FGSLTELQYLDLSANKLSSSIPKSIGN 556 (1078)
Q Consensus 530 -----------------------------------------------------~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 556 (1078)
|..+++|++|||++|++++.+|..+++
T Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~ 654 (768)
T 3rgz_A 575 YVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGS 654 (768)
T ss_dssp EEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGG
T ss_pred ccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhc
Confidence 334678999999999999999999999
Q ss_pred ccccccccccCcccccccchhhhcccccCeeecCCCccCCcCCCCcccccccceeeccCccccCCcccccccCCcCcEEE
Q 039595 557 LLKLYYLNLSNNQFSHTIPIEFEKLIHLSKLDLSHNILQEEIPPQVCNMESLEKLNLSHNNLSGFIPRCFEKMRSLSCID 636 (1078)
Q Consensus 557 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~l~ 636 (1078)
+++|+.|+|++|++++.+|..|+++++|+.|||++|++++.+|..+..+++|++|||++|+++|.+|.. ..+.++....
T Consensus 655 l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~-~~~~~~~~~~ 733 (768)
T 3rgz_A 655 MPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM-GQFETFPPAK 733 (768)
T ss_dssp CTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSS-SSGGGSCGGG
T ss_pred cccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCc-hhhccCCHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999975 3455566667
Q ss_pred cccCcCC
Q 039595 637 ICYNELQ 643 (1078)
Q Consensus 637 l~~N~l~ 643 (1078)
+.+|+--
T Consensus 734 ~~gN~~L 740 (768)
T 3rgz_A 734 FLNNPGL 740 (768)
T ss_dssp GCSCTEE
T ss_pred hcCCchh
Confidence 8888743
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.1e-63 Score=623.45 Aligned_cols=546 Identities=24% Similarity=0.263 Sum_probs=307.1
Q ss_pred CCCcEEeccCCcccccCCCCCCCCCCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeec
Q 039595 102 PHLVNLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSF 181 (1078)
Q Consensus 102 ~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l 181 (1078)
+++++|+|++|.+.+..+..|+++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|+.+++|++|++
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 45666666666666555555666666666666666666666666666666666666666666333335666666666666
Q ss_pred ccccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCccc--CCCCCcEEeccccccC
Q 039595 182 CHNNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLD--NLSNLDTLFLYKNSLS 259 (1078)
Q Consensus 182 ~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~--~l~~L~~L~L~~N~l~ 259 (1078)
++|.+++..|..|+++++|++|+|++|.+++..|..++++++|++|+|++|++++..+..+. .+++|++|++++|+++
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~ 184 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIK 184 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCC
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCccc
Confidence 66666655555666666666666666666666666666666666666666666655554433 3456666666666666
Q ss_pred CCCCcccCCCcc---------------------------cceeecccccccCccccccccccC--CceeeecccCCCCCC
Q 039595 260 GSIPSIIGNLKS---------------------------LHQLDLIENQLSGSIPLSFGNLSS--WTLMSLFSNSLSGSI 310 (1078)
Q Consensus 260 ~~~p~~~~~l~~---------------------------L~~L~Ls~N~l~~~~p~~~~~l~~--L~~L~l~~n~l~~~~ 310 (1078)
+..|..|..+++ |+.|++++|.+++..|..|..++. |+.|++++|.+++..
T Consensus 185 ~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~ 264 (680)
T 1ziw_A 185 EFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVG 264 (680)
T ss_dssp CBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEEC
T ss_pred ccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccC
Confidence 655655555544 555555555555555555555543 555555555555555
Q ss_pred CccccCCCccCeeeccccccCccCCCCCCCCCcCcEEEccCccCCC-----CCCc----cccccCCCCeEEcccccCccc
Q 039595 311 PPILGNLKSLSTLGLYLNQLNGVIPPSIGNLSSLRNLSLFNNGLYG-----SIPE----EIGYLKSLSELKLCKNNLSGV 381 (1078)
Q Consensus 311 p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-----~~p~----~~~~l~~L~~L~L~~N~l~~~ 381 (1078)
|..|+++++|++|++++|++++..|..|..+++|+.|++++|...+ .+|. .|..+++|++|++++|++++.
T Consensus 265 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~ 344 (680)
T 1ziw_A 265 NDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGI 344 (680)
T ss_dssp TTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCC
T ss_pred cccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCC
Confidence 5555555555555555555555555555555555555555544332 1222 444555555555555555555
Q ss_pred cCCCCccCCCCceeecccCcCCC--CCCcccccc--CCCCeEEccCccccccchhhccCCCCCcEecCCCCccCCc-cCc
Q 039595 382 IPHSVGNLTGLVLLNMCENHLFG--PIPKSLKSL--TSLKRVRFNQNNLVGKVYEAFGDHPNLTFLDLSQNNFDGK-ISF 456 (1078)
Q Consensus 382 ~p~~~~~l~~L~~L~L~~N~l~~--~~~~~l~~l--~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~ 456 (1078)
.+..|.++++|++|++++|.+.. ..+..|..+ ++|+.|++++|.+.++.+..|..+++|+.|++++|.+.+. ...
T Consensus 345 ~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 424 (680)
T 1ziw_A 345 KSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQ 424 (680)
T ss_dssp CTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSG
T ss_pred ChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcc
Confidence 55555555555555555555322 112222222 3455555555555555555555555555555555555432 224
Q ss_pred cccCCCCCceecccccccCCCCCccccCCCcccEEeccCCccC--CCcccccccCccCcEEeccCCccCCCccccccccc
Q 039595 457 NWRNLPKLDTFIVSMNNIFGSIPLEIGDSSKLQFLDLSSNHIV--GKIPVQLEKLFSLNKLILSLNQLSGSVPLEFGSLT 534 (1078)
Q Consensus 457 ~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~--~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 534 (1078)
.|.++++|++|++++|++.+..+..|..+++|+.|++++|.++ +..|..|.++++|+.|+|++|++++..+..|..++
T Consensus 425 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~ 504 (680)
T 1ziw_A 425 EWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLE 504 (680)
T ss_dssp GGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred cccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhcccc
Confidence 5555555555555555555555555555555555555555554 33455555555555555555555555555555555
Q ss_pred ccceeeccCccccCCCC--------cccccccccccccccCcccccccchhhhcccccCeeecCCCccCCcCCCCccccc
Q 039595 535 ELQYLDLSANKLSSSIP--------KSIGNLLKLYYLNLSNNQFSHTIPIEFEKLIHLSKLDLSHNILQEEIPPQVCNME 606 (1078)
Q Consensus 535 ~L~~L~Ls~N~l~~~~~--------~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 606 (1078)
+|++|+|++|++++..+ ..|.++++|++|+|++|+|+.+.+..|.++++|+.|+|++|+|++..+..|..++
T Consensus 505 ~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~ 584 (680)
T 1ziw_A 505 KLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQV 584 (680)
T ss_dssp TCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred ccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCC
Confidence 55555555555553211 1245555555555555555543334455555555555555555544444455555
Q ss_pred ccceeeccCccccCCcccccc-cCCcCcEEEcccCcCCCCCC
Q 039595 607 SLEKLNLSHNNLSGFIPRCFE-KMRSLSCIDICYNELQGPIP 647 (1078)
Q Consensus 607 ~L~~L~L~~N~l~~~~~~~l~-~l~~L~~l~l~~N~l~~~~~ 647 (1078)
+|++|+|++|+|++..+..|. .+++|+.+++++|+|.+.++
T Consensus 585 ~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 585 SLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp TCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred CCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 555555555555555555554 45555555555555555444
No 4
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.9e-62 Score=612.31 Aligned_cols=556 Identities=24% Similarity=0.242 Sum_probs=491.2
Q ss_pred EeccCCcccccCCCCCCCCCCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeecccccc
Q 039595 107 LNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNV 186 (1078)
Q Consensus 107 L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~ 186 (1078)
+|.++++++ .+|..+. ++|++|+|++|++++..+..|+++++|++|+|++|.+++..|..++.+++|++|+|++|.+
T Consensus 9 ~~cs~~~L~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 85 (680)
T 1ziw_A 9 ADCSHLKLT-QVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNEL 85 (680)
T ss_dssp EECCSSCCS-SCCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCC
T ss_pred eECCCCCcc-ccccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCcc
Confidence 444455554 5776665 7999999999999987778899999999999999999999999999999999999999999
Q ss_pred cCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCCCCccc
Q 039595 187 SGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSII 266 (1078)
Q Consensus 187 ~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~ 266 (1078)
++..+..|+++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..++++++|++|++++|++++..+..+
T Consensus 86 ~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 165 (680)
T 1ziw_A 86 SQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEEL 165 (680)
T ss_dssp CCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHH
T ss_pred CccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHh
Confidence 97666689999999999999999998888899999999999999999999999999999999999999999998777665
Q ss_pred C--CCcccceeecccccccCccccccccc---------------------------cCCceeeecccCCCCCCCccccCC
Q 039595 267 G--NLKSLHQLDLIENQLSGSIPLSFGNL---------------------------SSWTLMSLFSNSLSGSIPPILGNL 317 (1078)
Q Consensus 267 ~--~l~~L~~L~Ls~N~l~~~~p~~~~~l---------------------------~~L~~L~l~~n~l~~~~p~~l~~l 317 (1078)
. .+++|+.|++++|++++..|..|..+ ++|+.|++++|.+++..|..|.++
T Consensus 166 ~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l 245 (680)
T 1ziw_A 166 DIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGL 245 (680)
T ss_dssp GGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGG
T ss_pred hccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhcc
Confidence 4 56899999999999999988887765 456788888899998888889888
Q ss_pred Cc--cCeeeccccccCccCCCCCCCCCcCcEEEccCccCCCCCCccccccCCCCeEEcccccCcc-----ccC----CCC
Q 039595 318 KS--LSTLGLYLNQLNGVIPPSIGNLSSLRNLSLFNNGLYGSIPEEIGYLKSLSELKLCKNNLSG-----VIP----HSV 386 (1078)
Q Consensus 318 ~~--L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-----~~p----~~~ 386 (1078)
+. |++|+|++|++++..|..|+.+++|+.|++++|.+.+..|..+..+++|+.|++++|...+ .+| ..|
T Consensus 246 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~ 325 (680)
T 1ziw_A 246 KWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSF 325 (680)
T ss_dssp GGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTT
T ss_pred CcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhc
Confidence 66 9999999999999888999999999999999999998889999999999999999876543 223 378
Q ss_pred ccCCCCceeecccCcCCCCCCccccccCCCCeEEccCccc--cccchhhccCC--CCCcEecCCCCccCCccCccccCCC
Q 039595 387 GNLTGLVLLNMCENHLFGPIPKSLKSLTSLKRVRFNQNNL--VGKVYEAFGDH--PNLTFLDLSQNNFDGKISFNWRNLP 462 (1078)
Q Consensus 387 ~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l--~~~~~~~~~~l--~~L~~L~Ls~N~l~~~~~~~~~~l~ 462 (1078)
..+++|++|++++|++.+..+..|.++++|++|++++|.+ ..+....|..+ ++|+.|++++|+++++.+..|..++
T Consensus 326 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~ 405 (680)
T 1ziw_A 326 QWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLG 405 (680)
T ss_dssp TTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCT
T ss_pred ccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCC
Confidence 8899999999999999999999999999999999999975 34444555443 5899999999999999999999999
Q ss_pred CCceecccccccCCCCC-ccccCCCcccEEeccCCccCCCcccccccCccCcEEeccCCccC--CCccccccccccccee
Q 039595 463 KLDTFIVSMNNIFGSIP-LEIGDSSKLQFLDLSSNHIVGKIPVQLEKLFSLNKLILSLNQLS--GSVPLEFGSLTELQYL 539 (1078)
Q Consensus 463 ~L~~L~l~~N~i~~~~~-~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~--~~~~~~~~~l~~L~~L 539 (1078)
+|+.|++++|.+.+.++ ..+..+++|++|++++|++.+..+..|..+++|+.|++++|.++ +..|..|..+++|++|
T Consensus 406 ~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L 485 (680)
T 1ziw_A 406 HLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTIL 485 (680)
T ss_dssp TCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEE
T ss_pred CCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEE
Confidence 99999999999987665 68899999999999999999888999999999999999999987 5678999999999999
Q ss_pred eccCccccCCCCcccccccccccccccCcccccccc--------hhhhcccccCeeecCCCccCCcCCCCccccccccee
Q 039595 540 DLSANKLSSSIPKSIGNLLKLYYLNLSNNQFSHTIP--------IEFEKLIHLSKLDLSHNILQEEIPPQVCNMESLEKL 611 (1078)
Q Consensus 540 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--------~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 611 (1078)
+|++|.|++..+..|.++++|++|+|++|++++..+ ..|.++++|+.|+|++|+|+...+..|.++++|++|
T Consensus 486 ~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L 565 (680)
T 1ziw_A 486 DLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKII 565 (680)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCccee
Confidence 999999998888889999999999999999986532 237899999999999999996555679999999999
Q ss_pred eccCccccCCcccccccCCcCcEEEcccCcCCCCCCCC-----ccccCccccCCCCcCC
Q 039595 612 NLSHNNLSGFIPRCFEKMRSLSCIDICYNELQGPIPNS-----TVFKDGLMEGNKGLCG 665 (1078)
Q Consensus 612 ~L~~N~l~~~~~~~l~~l~~L~~l~l~~N~l~~~~~~~-----~~~~~~~~~~n~~lc~ 665 (1078)
+|++|++++..+..|..+++|+.|++++|++++..|.. .......+++||+.|.
T Consensus 566 ~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~ 624 (680)
T 1ziw_A 566 DLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCT 624 (680)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBC
T ss_pred ECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccC
Confidence 99999999888888999999999999999999876642 1233456789999984
No 5
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=7.8e-59 Score=590.99 Aligned_cols=521 Identities=24% Similarity=0.242 Sum_probs=412.5
Q ss_pred CCCCCcEEeccCCcccccCCCCCCCCCCcceeccCCCccCCCC-CccccCccceeEEEccCccCCCCCCcccccccccce
Q 039595 100 SFPHLVNLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLSGVI-SPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHE 178 (1078)
Q Consensus 100 ~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~-p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~ 178 (1078)
-.++|++|||++|.+++..|..|+++++|++|||++|.+.+.+ |..|+++++|++|+|++|.+++..|..|+.+++|++
T Consensus 22 lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 101 (844)
T 3j0a_A 22 VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFE 101 (844)
T ss_dssp SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCC
T ss_pred CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCE
Confidence 4578999999999998888889999999999999999766666 677899999999999999998888899999999999
Q ss_pred eecccccccCCccCc--ccCCCCCcEEEccCCCCCCCCC-CcccccCCCCeeecCCcccCCCCCCcccCC--CCCcEEec
Q 039595 179 FSFCHNNVSGRIPSS--LGNLSKLALLYLNNNSLFGYIP-TVMGNLKSLSTLDLSQNQLNGLIPCTLDNL--SNLDTLFL 253 (1078)
Q Consensus 179 L~l~~n~~~~~~p~~--l~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l--~~L~~L~L 253 (1078)
|+|++|.+++.+|.. |+++++|++|+|++|.+++..| ..|+++++|++|+|++|++++..|..+..+ ++|+.|+|
T Consensus 102 L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L 181 (844)
T 3j0a_A 102 LRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSL 181 (844)
T ss_dssp EECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEE
T ss_pred eeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEEC
Confidence 999999998877765 8899999999999999887655 578889999999999999988888888877 88999999
Q ss_pred cccccCCCCCcccCCCcc------cceeecccccccCccccccccc---cCCceeeecccCCCCCCCccccCCCccCeee
Q 039595 254 YKNSLSGSIPSIIGNLKS------LHQLDLIENQLSGSIPLSFGNL---SSWTLMSLFSNSLSGSIPPILGNLKSLSTLG 324 (1078)
Q Consensus 254 ~~N~l~~~~p~~~~~l~~------L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~ 324 (1078)
++|.+.+..|..++.+++ |+.|++++|.+++..|..+... ..++.+.+..+.+.. .
T Consensus 182 ~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~---------------~ 246 (844)
T 3j0a_A 182 AANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGA---------------G 246 (844)
T ss_dssp CCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBC---------------S
T ss_pred CCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccc---------------c
Confidence 999998888877776665 8888888888888777776543 345566655333221 1
Q ss_pred ccccccCccCCCCCCCC--CcCcEEEccCccCCCCCCccccccCCCCeEEcccccCccccCCCCccCCCCceeecccCcC
Q 039595 325 LYLNQLNGVIPPSIGNL--SSLRNLSLFNNGLYGSIPEEIGYLKSLSELKLCKNNLSGVIPHSVGNLTGLVLLNMCENHL 402 (1078)
Q Consensus 325 L~~N~l~~~~p~~l~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 402 (1078)
+..+.+.+..+..|..+ ++|+.|++++|.+.+..|..|..+++|+.|+|++|++++..|..|.++++|++|++++|++
T Consensus 247 ~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l 326 (844)
T 3j0a_A 247 FGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLL 326 (844)
T ss_dssp SSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCC
T ss_pred ccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCC
Confidence 12233333334444443 5677777777777766666777777777777777777777677777777777777777777
Q ss_pred CCCCCccccccCCCCeEEccCccccccchhhccCCCCCcEecCCCCccCCccCccccCCCCCceecccccccCCCCCccc
Q 039595 403 FGPIPKSLKSLTSLKRVRFNQNNLVGKVYEAFGDHPNLTFLDLSQNNFDGKISFNWRNLPKLDTFIVSMNNIFGSIPLEI 482 (1078)
Q Consensus 403 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~ 482 (1078)
.+..|..|..+++|++|++++|.+..+....|..+++|+.|+|++|.++++. .+++|+.|++++|+++. +|..
T Consensus 327 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~-----~~~~L~~L~l~~N~l~~-l~~~- 399 (844)
T 3j0a_A 327 GELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIH-----FIPSIPDIFLSGNKLVT-LPKI- 399 (844)
T ss_dssp SCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCS-----SCCSCSEEEEESCCCCC-CCCC-
T ss_pred CccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCccc-----CCCCcchhccCCCCccc-cccc-
Confidence 7777777777777777777777777777777777777777777777776533 26777788888887763 3332
Q ss_pred cCCCcccEEeccCCccCCCc-ccccccCccCcEEeccCCccCCCccc-ccccccccceeeccCcccc-----CCCCcccc
Q 039595 483 GDSSKLQFLDLSSNHIVGKI-PVQLEKLFSLNKLILSLNQLSGSVPL-EFGSLTELQYLDLSANKLS-----SSIPKSIG 555 (1078)
Q Consensus 483 ~~l~~L~~L~Ls~N~i~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~-----~~~~~~~~ 555 (1078)
..+++.|++++|++++.. +..+.++++|+.|+|++|++++..+. .+..+++|++|+|++|.++ +..+..|.
T Consensus 400 --~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 477 (844)
T 3j0a_A 400 --NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFE 477 (844)
T ss_dssp --CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSS
T ss_pred --ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhc
Confidence 467899999999998653 23456889999999999999865543 4667899999999999997 44556789
Q ss_pred cccccccccccCcccccccchhhhcccccCeeecCCCccCCcCCCCcccccccceeeccCccccCCcccccccCCcCcEE
Q 039595 556 NLLKLYYLNLSNNQFSHTIPIEFEKLIHLSKLDLSHNILQEEIPPQVCNMESLEKLNLSHNNLSGFIPRCFEKMRSLSCI 635 (1078)
Q Consensus 556 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~l 635 (1078)
++++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..+. ++|+.|+|++|+|++..|..| ++|+.+
T Consensus 478 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~---~~L~~l 552 (844)
T 3j0a_A 478 GLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVF---VSLSVL 552 (844)
T ss_dssp CBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCC---SSCCEE
T ss_pred CcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHh---CCcCEE
Confidence 999999999999999999999999999999999999999987776665 899999999999999999776 478999
Q ss_pred EcccCcCCCCCCCC
Q 039595 636 DICYNELQGPIPNS 649 (1078)
Q Consensus 636 ~l~~N~l~~~~~~~ 649 (1078)
++++|++.+.++..
T Consensus 553 ~l~~Np~~C~c~~~ 566 (844)
T 3j0a_A 553 DITHNKFICECELS 566 (844)
T ss_dssp EEEEECCCCSSSCC
T ss_pred EecCCCcccccccH
Confidence 99999999988753
No 6
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=6.1e-59 Score=572.80 Aligned_cols=518 Identities=23% Similarity=0.263 Sum_probs=400.2
Q ss_pred CCCcEEeccCCcccccCCCCCCCCCCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeec
Q 039595 102 PHLVNLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSF 181 (1078)
Q Consensus 102 ~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l 181 (1078)
+.+++|+|++|.+++..|..|+++++|++|+|++|++++..|.+|+++++|++|+|++|++++..|..|+.+++|++|++
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 47899999999999988999999999999999999999888999999999999999999999888999999999999999
Q ss_pred ccccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCc--EEeccccccC
Q 039595 182 CHNNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLD--TLFLYKNSLS 259 (1078)
Q Consensus 182 ~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~--~L~L~~N~l~ 259 (1078)
++|.+++..|..++++++|++|+|++|++++..+..+..+++|++|+|++|++++..|..|+.+++|+ +|++++|+++
T Consensus 113 ~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~ 192 (606)
T 3t6q_A 113 IQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIA 192 (606)
T ss_dssp TTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCC
T ss_pred cccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccC
Confidence 99999987788999999999999999999975544555699999999999999988888899999999 8999999999
Q ss_pred CCCCcccCCCcccceeecccccccCccccccccccCCceeeecccCCCC-----CCCccccCCC--ccCeeeccccccCc
Q 039595 260 GSIPSIIGNLKSLHQLDLIENQLSGSIPLSFGNLSSWTLMSLFSNSLSG-----SIPPILGNLK--SLSTLGLYLNQLNG 332 (1078)
Q Consensus 260 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~-----~~p~~l~~l~--~L~~L~L~~N~l~~ 332 (1078)
+..|..+.. .+|+.|++++|. .++..+..+..+....+.-+.+.+ ..+..+..+. +|+.|++++|++++
T Consensus 193 ~~~~~~~~~-~~L~~L~l~~~~---~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~ 268 (606)
T 3t6q_A 193 GIEPGAFDS-AVFQSLNFGGTQ---NLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFN 268 (606)
T ss_dssp EECTTTTTT-CEEEEEECTTCS---CHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSS
T ss_pred ccChhHhhh-ccccccccCCch---hHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCc
Confidence 877777665 689999999986 345566666665554444333221 1122233332 56666666666666
Q ss_pred cCCCCCCCCCcCcEEEccCccCCCCCCccccccCCCCeEEcccccCccccCCCCccCCCCceeecccCcCCCCCCccccc
Q 039595 333 VIPPSIGNLSSLRNLSLFNNGLYGSIPEEIGYLKSLSELKLCKNNLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLKS 412 (1078)
Q Consensus 333 ~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~ 412 (1078)
..+..|+.+++|+.|++++|.++ .+|..+..+++|++|++++|++++..|..+.++++|+.|++++|.+.+.+|.
T Consensus 269 ~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~---- 343 (606)
T 3t6q_A 269 ISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGT---- 343 (606)
T ss_dssp CCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCS----
T ss_pred cCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccch----
Confidence 65556666666666666666666 5566666666666666666666665555666666666666666665543332
Q ss_pred cCCCCeEEccCccccccchhhccCCCCCcEecCCCCccCCcc--CccccCCCCCceecccccccCCCCCccccCCCcccE
Q 039595 413 LTSLKRVRFNQNNLVGKVYEAFGDHPNLTFLDLSQNNFDGKI--SFNWRNLPKLDTFIVSMNNIFGSIPLEIGDSSKLQF 490 (1078)
Q Consensus 413 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~--~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~ 490 (1078)
..+..+++|++|++++|.+++.. +..+..+++|++|++++|.+.+..|..+..+++|++
T Consensus 344 -------------------~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 404 (606)
T 3t6q_A 344 -------------------GCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLEL 404 (606)
T ss_dssp -------------------STTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSE
T ss_pred -------------------hhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCe
Confidence 23444445555555555554443 344555555555555555555566667777778888
Q ss_pred EeccCCccCCCccc-ccccCccCcEEeccCCccCCCcccccccccccceeeccCccccCC---CCccccccccccccccc
Q 039595 491 LDLSSNHIVGKIPV-QLEKLFSLNKLILSLNQLSGSVPLEFGSLTELQYLDLSANKLSSS---IPKSIGNLLKLYYLNLS 566 (1078)
Q Consensus 491 L~Ls~N~i~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~---~~~~~~~l~~L~~L~Ls 566 (1078)
|++++|++++..+. .+..+++|+.|++++|++++..|..|..+++|++|+|++|++++. .+..+..+++|++|+|+
T Consensus 405 L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls 484 (606)
T 3t6q_A 405 LDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLS 484 (606)
T ss_dssp EECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECT
T ss_pred EECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECC
Confidence 88888888766544 377888888888888888877788888888888888888888762 33568888999999999
Q ss_pred CcccccccchhhhcccccCeeecCCCccCCcCCCCcccccccceeeccCccccCCcccccccCCcCcEEEcccCcCCCCC
Q 039595 567 NNQFSHTIPIEFEKLIHLSKLDLSHNILQEEIPPQVCNMESLEKLNLSHNNLSGFIPRCFEKMRSLSCIDICYNELQGPI 646 (1078)
Q Consensus 567 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~l~l~~N~l~~~~ 646 (1078)
+|++++..|..|..+++|+.|+|++|++++..|..+..+++| +|+|++|++++.+|..|..+++|+.+++++|++++.+
T Consensus 485 ~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 563 (606)
T 3t6q_A 485 FCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTC 563 (606)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSG
T ss_pred CCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccC
Confidence 999988888899999999999999999998888889999999 9999999999988988999999999999999999876
Q ss_pred CC
Q 039595 647 PN 648 (1078)
Q Consensus 647 ~~ 648 (1078)
+.
T Consensus 564 ~~ 565 (606)
T 3t6q_A 564 SN 565 (606)
T ss_dssp GG
T ss_pred Cc
Confidence 63
No 7
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=5.1e-58 Score=564.57 Aligned_cols=527 Identities=20% Similarity=0.208 Sum_probs=429.3
Q ss_pred ccceEeeCC---------CCeEEEeccCccccCCcccCCccCCCCCCcEEeccCCcccccCCCCCCCCCCcceeccCCCc
Q 039595 67 WFGISCNHA---------GSRVISINLSTLCLNGTFQDFSFSSFPHLVNLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQ 137 (1078)
Q Consensus 67 w~gv~C~~~---------~~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~ 137 (1078)
+.-|.|... ...++.++|+++.+.+ +.+..|+++++|++|+|++|.+.+..|..|+++++|++|+|++|+
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~-~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 92 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPT-IQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANP 92 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSE-ECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCc-CChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCc
Confidence 455788653 2468889999998875 445689999999999999999999999999999999999999999
Q ss_pred cCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeecccccccCCccCcccCCCCCcEEEccCCCCCCCCCCc
Q 039595 138 LSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTV 217 (1078)
Q Consensus 138 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~ 217 (1078)
+++..|..|+++++|++|+|++|++++..|..++.+++|++|++++|.+.+..+..+..+++|++|+|++|.+++..|..
T Consensus 93 l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 172 (606)
T 3t6q_A 93 LIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKED 172 (606)
T ss_dssp CSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHH
T ss_pred ccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhh
Confidence 99888999999999999999999999777888999999999999999999855455555999999999999999888889
Q ss_pred ccccCCCC--eeecCCcccCCCCCCcccCCCCCcEEeccccccCCCCCcccCCCcccceeeccccccc-----Ccccccc
Q 039595 218 MGNLKSLS--TLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLDLIENQLS-----GSIPLSF 290 (1078)
Q Consensus 218 ~~~l~~L~--~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-----~~~p~~~ 290 (1078)
|+.+++|+ .|++++|++++..|..+.. .+|++|++++|. .++..+..+.++....+..+.+. ...+..|
T Consensus 173 ~~~l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~---~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~ 248 (606)
T 3t6q_A 173 MSSLQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQ---NLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVF 248 (606)
T ss_dssp HHTTTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCS---CHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGG
T ss_pred hhhhcccceeEEecCCCccCccChhHhhh-ccccccccCCch---hHHHHhhhccccchhheechhhccccccccChhHh
Confidence 99999999 9999999999988877665 789999999997 34555555555554444333222 2234445
Q ss_pred cccc--CCceeeecccCCCCCCCccccCCCccCeeeccccccCccCCCCCCCCCcCcEEEccCccCCCCCCccccccCCC
Q 039595 291 GNLS--SWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLNGVIPPSIGNLSSLRNLSLFNNGLYGSIPEEIGYLKSL 368 (1078)
Q Consensus 291 ~~l~--~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 368 (1078)
..+. +|+.|++++|.+++..+..|+++++|++|++++|+++ .+|..+..+++|++|++++|.+.+..|..+..+++|
T Consensus 249 ~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 327 (606)
T 3t6q_A 249 EGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSL 327 (606)
T ss_dssp GGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTC
T ss_pred chhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcC
Confidence 5554 7899999999999988889999999999999999999 678889999999999999999998888999999999
Q ss_pred CeEEcccccCccccCC-CCccCCCCceeecccCcCCCCC--CccccccCCCCeEEccCccccccchhhccCCCCCcEecC
Q 039595 369 SELKLCKNNLSGVIPH-SVGNLTGLVLLNMCENHLFGPI--PKSLKSLTSLKRVRFNQNNLVGKVYEAFGDHPNLTFLDL 445 (1078)
Q Consensus 369 ~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~--~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 445 (1078)
++|++++|.+.+.+|. .+.++++|++|++++|.+.+.. +..+..+++|++|++++|.+.++.+..|..+++|++|++
T Consensus 328 ~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 407 (606)
T 3t6q_A 328 THLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDL 407 (606)
T ss_dssp SEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEEC
T ss_pred CEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEEC
Confidence 9999999999866654 5899999999999999987655 666777777777777777776666666666666666666
Q ss_pred CCCccCCccCccccCCCCCceecccccccCCCCCccccCCCcccEEeccCCccCCCcccccccCccCcEEeccCCccCCC
Q 039595 446 SQNNFDGKISFNWRNLPKLDTFIVSMNNIFGSIPLEIGDSSKLQFLDLSSNHIVGKIPVQLEKLFSLNKLILSLNQLSGS 525 (1078)
Q Consensus 446 s~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 525 (1078)
++|++.+..+ +..+..+++|++|++++|.+++..|..+.++++|++|++++|++++.
T Consensus 408 ~~n~l~~~~~-----------------------~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 464 (606)
T 3t6q_A 408 AFTRLKVKDA-----------------------QSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKG 464 (606)
T ss_dssp TTCCEECCTT-----------------------CCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGG
T ss_pred CCCcCCCccc-----------------------chhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCcc
Confidence 6666653322 22356667777777777777766777777777777777777777652
Q ss_pred ---cccccccccccceeeccCccccCCCCcccccccccccccccCcccccccchhhhcccccCeeecCCCccCCcCCCCc
Q 039595 526 ---VPLEFGSLTELQYLDLSANKLSSSIPKSIGNLLKLYYLNLSNNQFSHTIPIEFEKLIHLSKLDLSHNILQEEIPPQV 602 (1078)
Q Consensus 526 ---~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 602 (1078)
.+..+..+++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|..+++| .|+|++|++++.+|..+
T Consensus 465 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~ 543 (606)
T 3t6q_A 465 NIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLL 543 (606)
T ss_dssp EECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGH
T ss_pred ccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhc
Confidence 23567778888888888888887778888888888888888888888888888888888 88888888887777777
Q ss_pred ccccccceeeccCccccCCcc
Q 039595 603 CNMESLEKLNLSHNNLSGFIP 623 (1078)
Q Consensus 603 ~~l~~L~~L~L~~N~l~~~~~ 623 (1078)
..+++|++|++++|++++..+
T Consensus 544 ~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 544 PILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp HHHHTSSEEECTTCCEECSGG
T ss_pred ccCCCCCEEeCCCCCccccCC
Confidence 888888888888888886544
No 8
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.8e-59 Score=577.23 Aligned_cols=520 Identities=18% Similarity=0.231 Sum_probs=298.4
Q ss_pred CCHHHHHHHHHHHHhcCCCCCC-----ccccCCCCCCCCCCCCCCCCcc---cceEeeCCCCeEEEeccCccccCCcccC
Q 039595 24 DSSAEACALLNWKTSLQNQNLN-----SSLLSSWTLYPTNASKISPCSW---FGISCNHAGSRVISINLSTLCLNGTFQD 95 (1078)
Q Consensus 24 ~~~~~~~all~~k~~~~~~~~~-----~~~l~sW~~~~~~~~~~~~c~w---~gv~C~~~~~~v~~l~l~~~~l~g~~~~ 95 (1078)
....|+.||.+||.++..+.+. ....++|+ .++|||.| .||+|+.. +||++|+|++.++.|.++
T Consensus 27 ~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~------~~~~~c~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp- 98 (636)
T 4eco_A 27 EYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWN------FNKELDMWGAQPGVSLNSN-GRVTGLSLEGFGASGRVP- 98 (636)
T ss_dssp HHHHHHHHHHHHHHHTTGGGCCCCC------CCCC------CSSCGGGTTCCTTEEECTT-CCEEEEECTTSCCEEEEC-
T ss_pred hHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCC------CCCCcccccCCCCeEEcCC-CCEEEEEecCcccCCcCC-
Confidence 3457999999999999665321 11234675 35789999 99999865 899999998887777776
Q ss_pred CccCCCCCCcEEeccCCcc------cc------cCCCCCCCCCCcceeccCCCccCCCCCccccC-ccceeEEEccCccC
Q 039595 96 FSFSSFPHLVNLNLSFNLF------FG------NIPPQIGNLSKLQNLDLGNNQLSGVISPEIGK-LNQLRRLYLDMNQL 162 (1078)
Q Consensus 96 ~~~~~l~~L~~L~L~~n~~------~~------~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~-l~~L~~L~L~~n~l 162 (1078)
..++++++|++|+|++|.+ .| .+|+.. +..|+ +++++|.+.+.+|..++. +..+..+++....+
T Consensus 99 ~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~ 175 (636)
T 4eco_A 99 DAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSI 175 (636)
T ss_dssp GGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCC
T ss_pred hHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCcccccc
Confidence 3677777777777777765 22 333322 34455 556666555555555442 23333333332222
Q ss_pred CCCCCcccccccccceeecc--cccccCCccCcccCCCCCcEEEccCCCCCCC-CCCcccccCCCCeeecCCcccCCCCC
Q 039595 163 HGTIPPVIGQLSLIHEFSFC--HNNVSGRIPSSLGNLSKLALLYLNNNSLFGY-IPTVMGNLKSLSTLDLSQNQLNGLIP 239 (1078)
Q Consensus 163 ~~~~p~~i~~l~~L~~L~l~--~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p 239 (1078)
.. .....++.+.+. .|+++| +|..|+++++|++|+|++|++++. ++.. ...-+.+...+.+|
T Consensus 176 ~~------~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~--------~~~~~~~~~~~~ip 240 (636)
T 4eco_A 176 KK------SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEA--------WENENSEYAQQYKT 240 (636)
T ss_dssp CC------CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSS--------CSCTTSHHHHHHTT
T ss_pred cc------ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCcccccccccc--------ccccccchhcccCc
Confidence 10 011112222222 345555 555555555555555555555543 0000 00000000000144
Q ss_pred Cccc--CCCCCcEEeccccccCCCCCcccCCCcccceeeccccc-ccC-ccccccccc------cCCceeeecccCCCCC
Q 039595 240 CTLD--NLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLDLIENQ-LSG-SIPLSFGNL------SSWTLMSLFSNSLSGS 309 (1078)
Q Consensus 240 ~~l~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l------~~L~~L~l~~n~l~~~ 309 (1078)
..++ ++++|++|+|++|++.+.+|..|+++++|++|+|++|+ ++| .+|..++.+ ++|+.|++++|+++ .
T Consensus 241 ~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ 319 (636)
T 4eco_A 241 EDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-T 319 (636)
T ss_dssp SCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-S
T ss_pred hhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-c
Confidence 4444 44444444444444444444444444444444444444 444 444444443 45555555555555 4
Q ss_pred CCc--cccCCCccCeeeccccccCccCCCCCCCCCcCcEEEccCccCCCCCCccccccCC-CCeEEcccccCccccCCCC
Q 039595 310 IPP--ILGNLKSLSTLGLYLNQLNGVIPPSIGNLSSLRNLSLFNNGLYGSIPEEIGYLKS-LSELKLCKNNLSGVIPHSV 386 (1078)
Q Consensus 310 ~p~--~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~p~~~ 386 (1078)
+|. .++++++|++|++++|+++|.+| .++.+++|+.|++++|++. .+|..+..+++ |++|++++|+++ .+|..+
T Consensus 320 ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~ 396 (636)
T 4eco_A 320 FPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIF 396 (636)
T ss_dssp CCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCC
T ss_pred cCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhh
Confidence 444 55555555555555555555555 5555555555555555555 45555555555 555555555555 444444
Q ss_pred ccCC--CCceeecccCcCCCCCCcccc-------ccCCCCeEEccCccccccchhhccCCCCCcEecCCCCccCCccCcc
Q 039595 387 GNLT--GLVLLNMCENHLFGPIPKSLK-------SLTSLKRVRFNQNNLVGKVYEAFGDHPNLTFLDLSQNNFDGKISFN 457 (1078)
Q Consensus 387 ~~l~--~L~~L~L~~N~l~~~~~~~l~-------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 457 (1078)
..++ +|++|++++|++.+.+|..+. .+++|++|++++|.+..++...+..+++|++|+|++|+++.++...
T Consensus 397 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~ 476 (636)
T 4eco_A 397 DAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNS 476 (636)
T ss_dssp CTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSS
T ss_pred hhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHH
Confidence 4433 555566666665555555555 5556666666666666666666666667777777777776555555
Q ss_pred ccCCC-------CCceecccccccCCCCCcccc--CCCcccEEeccCCccCCCcccccccCccCcEEeccCCccCCCccc
Q 039595 458 WRNLP-------KLDTFIVSMNNIFGSIPLEIG--DSSKLQFLDLSSNHIVGKIPVQLEKLFSLNKLILSLNQLSGSVPL 528 (1078)
Q Consensus 458 ~~~l~-------~L~~L~l~~N~i~~~~~~~~~--~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 528 (1078)
+.... +|++|++++|+++ .+|..+. .+++|++|+|++|+|++ +|..+.++++|+.|+|++|+
T Consensus 477 ~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~------- 547 (636)
T 4eco_A 477 LKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQR------- 547 (636)
T ss_dssp SEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCB-------
T ss_pred hccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCc-------
Confidence 54433 7777888888777 5667776 88899999999999986 78888888999999997665
Q ss_pred ccccccccceeeccCccccCCCCcccccccccccccccCcccccccchhhhcccccCeeecCCCccCC
Q 039595 529 EFGSLTELQYLDLSANKLSSSIPKSIGNLLKLYYLNLSNNQFSHTIPIEFEKLIHLSKLDLSHNILQE 596 (1078)
Q Consensus 529 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 596 (1078)
++++|++.+.+|..+.++++|++|+|++|+|+ .+|..+. ++|+.|||++|++..
T Consensus 548 -----------~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 548 -----------DAQGNRTLREWPEGITLCPSLTQLQIGSNDIR-KVNEKIT--PNISVLDIKDNPNIS 601 (636)
T ss_dssp -----------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCCC-BCCSCCC--TTCCEEECCSCTTCE
T ss_pred -----------ccccCcccccChHHHhcCCCCCEEECCCCcCC-ccCHhHh--CcCCEEECcCCCCcc
Confidence 44555555555555666666666666666663 4444443 456666666665554
No 9
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=4e-57 Score=575.22 Aligned_cols=518 Identities=22% Similarity=0.195 Sum_probs=384.4
Q ss_pred CcccceEeeCCCCeEEEeccCccccCCcccCCccCCCCCCcEEeccCCcccccC-CCCCCCCCCcceeccCCCccCCCCC
Q 039595 65 CSWFGISCNHAGSRVISINLSTLCLNGTFQDFSFSSFPHLVNLNLSFNLFFGNI-PPQIGNLSKLQNLDLGNNQLSGVIS 143 (1078)
Q Consensus 65 c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~L~~n~~~~~~-p~~~~~l~~L~~L~Ls~n~l~~~~p 143 (1078)
|.|.+|.+ ...+++.|||+.+.+.+. .+..|.++++|++|+|++|.+.+.+ |..|+++++|++|+|++|.+++..|
T Consensus 14 ~~L~~vP~--lp~~l~~LdLs~N~i~~i-~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p 90 (844)
T 3j0a_A 14 CNLTQVPQ--VLNTTERLLLSFNYIRTV-TASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHP 90 (844)
T ss_dssp CCSSCCCS--SCTTCCEEEEESCCCCEE-CSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECT
T ss_pred CCCCCCCC--CCCCcCEEECCCCcCCcc-ChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCH
Confidence 67999988 456889999999888754 4568999999999999999877777 7789999999999999999999889
Q ss_pred ccccCccceeEEEccCccCCCCCCcc--cccccccceeecccccccCCcc-CcccCCCCCcEEEccCCCCCCCCCCcccc
Q 039595 144 PEIGKLNQLRRLYLDMNQLHGTIPPV--IGQLSLIHEFSFCHNNVSGRIP-SSLGNLSKLALLYLNNNSLFGYIPTVMGN 220 (1078)
Q Consensus 144 ~~~~~l~~L~~L~L~~n~l~~~~p~~--i~~l~~L~~L~l~~n~~~~~~p-~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ 220 (1078)
..|+++++|++|+|++|.+++.+|.. ++.+++|++|+|++|.+.+..| ..|+++++|++|+|++|.+++..|..+..
T Consensus 91 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~ 170 (844)
T 3j0a_A 91 DAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEP 170 (844)
T ss_dssp TSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHH
T ss_pred hHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHccc
Confidence 99999999999999999999888876 9999999999999999998765 57999999999999999999999999998
Q ss_pred c--CCCCeeecCCcccCCCCCCcccCCCC------CcEEeccccccCCCCCcccCCC---cccceeeccccc--------
Q 039595 221 L--KSLSTLDLSQNQLNGLIPCTLDNLSN------LDTLFLYKNSLSGSIPSIIGNL---KSLHQLDLIENQ-------- 281 (1078)
Q Consensus 221 l--~~L~~L~L~~N~l~~~~p~~l~~l~~------L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~Ls~N~-------- 281 (1078)
+ ++|+.|+|++|.+++..|..++.+++ |++|++++|++++.+|..+... .+++.|.++.+.
T Consensus 171 l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~ 250 (844)
T 3j0a_A 171 LQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFH 250 (844)
T ss_dssp HHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCS
T ss_pred ccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccccccccccc
Confidence 8 89999999999999998888877776 9999999999998888777643 578888887443
Q ss_pred -ccCccccccccc--cCCceeeecccCCCCCCCccccCCCccCeeeccccccCccCCCCCCCCCcCcEEEccCccCCCCC
Q 039595 282 -LSGSIPLSFGNL--SSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLNGVIPPSIGNLSSLRNLSLFNNGLYGSI 358 (1078)
Q Consensus 282 -l~~~~p~~~~~l--~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 358 (1078)
+.+..+..|..+ ++|+.|++++|.+.+..|..|.++++|++|+|++|++++..|..|..+++|+.|+|++|.+.+..
T Consensus 251 ~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 330 (844)
T 3j0a_A 251 NIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELY 330 (844)
T ss_dssp SSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCC
T ss_pred ccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccC
Confidence 333333333333 34555555555555544555555555555555555555554555555555555555555555444
Q ss_pred CccccccCCCCeEEcccccCccccCCCCccCCCCceeecccCcCCCCCCccccccCCCCeEEccCccccccchhhccCCC
Q 039595 359 PEEIGYLKSLSELKLCKNNLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLKSLTSLKRVRFNQNNLVGKVYEAFGDHP 438 (1078)
Q Consensus 359 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 438 (1078)
|..|..+++|+.|++++|++.+..+..|.++++|++|++++|.++ .+.. ++
T Consensus 331 ~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~------------------------~i~~-----~~ 381 (844)
T 3j0a_A 331 SSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALT------------------------TIHF-----IP 381 (844)
T ss_dssp SCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSC------------------------CCSS-----CC
T ss_pred HHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCC------------------------cccC-----CC
Confidence 555555555555555555555444444555555555555555544 3221 34
Q ss_pred CCcEecCCCCccCCccCccccCCCCCceecccccccCCCC-CccccCCCcccEEeccCCccCCCccc-ccccCccCcEEe
Q 039595 439 NLTFLDLSQNNFDGKISFNWRNLPKLDTFIVSMNNIFGSI-PLEIGDSSKLQFLDLSSNHIVGKIPV-QLEKLFSLNKLI 516 (1078)
Q Consensus 439 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~-~~~~~~l~~L~~L~Ls~N~i~~~~~~-~~~~l~~L~~L~ 516 (1078)
+|+.|++++|+++.+... ..+++.++++.|++.+.. +..+..+++|++|+|++|++++..+. .+..+++|+.|+
T Consensus 382 ~L~~L~l~~N~l~~l~~~----~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~ 457 (844)
T 3j0a_A 382 SIPDIFLSGNKLVTLPKI----NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLF 457 (844)
T ss_dssp SCSEEEEESCCCCCCCCC----CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCE
T ss_pred CcchhccCCCCccccccc----ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCcccccc
Confidence 455555555554433211 234455555555554432 22345677888888888888755433 345678888888
Q ss_pred ccCCccC-----CCcccccccccccceeeccCccccCCCCcccccccccccccccCcccccccchhhhcccccCeeecCC
Q 039595 517 LSLNQLS-----GSVPLEFGSLTELQYLDLSANKLSSSIPKSIGNLLKLYYLNLSNNQFSHTIPIEFEKLIHLSKLDLSH 591 (1078)
Q Consensus 517 Ls~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 591 (1078)
|++|.++ +..+..|..+++|+.|+|++|.|++..|..|..+++|++|+|++|+|++..+..+. ++|+.|||++
T Consensus 458 Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~ 535 (844)
T 3j0a_A 458 LGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISR 535 (844)
T ss_dssp EESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEE
T ss_pred CCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCC
Confidence 8888886 34456788999999999999999998888999999999999999999987777766 8999999999
Q ss_pred CccCCcCCCCcccccccceeeccCccccCCcc
Q 039595 592 NILQEEIPPQVCNMESLEKLNLSHNNLSGFIP 623 (1078)
Q Consensus 592 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 623 (1078)
|+|++..|..+ .+|+.|++++|++.+..+
T Consensus 536 N~l~~~~~~~~---~~L~~l~l~~Np~~C~c~ 564 (844)
T 3j0a_A 536 NQLLAPNPDVF---VSLSVLDITHNKFICECE 564 (844)
T ss_dssp ECCCCCCSCCC---SSCCEEEEEEECCCCSSS
T ss_pred CcCCCCChhHh---CCcCEEEecCCCcccccc
Confidence 99998877665 478999999999987543
No 10
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.5e-57 Score=560.40 Aligned_cols=520 Identities=21% Similarity=0.232 Sum_probs=399.6
Q ss_pred CCCcEEeccCCcccccCCCCCCCCCCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeec
Q 039595 102 PHLVNLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSF 181 (1078)
Q Consensus 102 ~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l 181 (1078)
++|++|+|++|.+.+..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|+.+++|++|++
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 78999999999999888889999999999999999999877888999999999999999999888999999999999999
Q ss_pred ccccccCCccCcccCCCCCcEEEccCCCCCC-CCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCc----EEecccc
Q 039595 182 CHNNVSGRIPSSLGNLSKLALLYLNNNSLFG-YIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLD----TLFLYKN 256 (1078)
Q Consensus 182 ~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~----~L~L~~N 256 (1078)
++|.+.+..|..++++++|++|+|++|.+++ .+|..|+++++|++|+|++|++++..|..|+.+++|+ +|++++|
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n 191 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLN 191 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTC
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCC
Confidence 9999998777889999999999999999986 5688999999999999999999988888888777765 7999999
Q ss_pred ccCCCCCcccCCCcccceeeccccccc-CccccccccccCCceeeecccCCCCCCCccccCCCccCeeeccccccCccCC
Q 039595 257 SLSGSIPSIIGNLKSLHQLDLIENQLS-GSIPLSFGNLSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLNGVIP 335 (1078)
Q Consensus 257 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p 335 (1078)
.+++..+..+... +|+.|++++|.++ +..|..+.++++|+.+++..+.+.+.. .+.. +....+
T Consensus 192 ~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~--------~l~~-------~~~~~~ 255 (606)
T 3vq2_A 192 PIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDER--------NLEI-------FEPSIM 255 (606)
T ss_dssp CCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSC--------CCSC-------CCGGGG
T ss_pred CcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCC--------cccc-------cChHHh
Confidence 9986666666554 8999999999887 456777888888888887666554211 0000 000011
Q ss_pred CCCCCCCcCcEEEc-cCccCCCCCCccccccCCCCeEEcccccCccccCCCCccCCCCceeecccCcCCCCCCccccccC
Q 039595 336 PSIGNLSSLRNLSL-FNNGLYGSIPEEIGYLKSLSELKLCKNNLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLKSLT 414 (1078)
Q Consensus 336 ~~l~~l~~L~~L~L-s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~ 414 (1078)
..+..+ .++.+++ ..|.+.+.+|. +..+++|+.|++++|.+.. +| .+..+++|+.|++++|++ +.+| .+ .++
T Consensus 256 ~~l~~l-~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~-l~-~l~~~~~L~~L~l~~n~l-~~lp-~~-~l~ 328 (606)
T 3vq2_A 256 EGLCDV-TIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKY-LE-DVPKHFKWQSLSIIRCQL-KQFP-TL-DLP 328 (606)
T ss_dssp TTGGGS-EEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCC-CC-CCCTTCCCSEEEEESCCC-SSCC-CC-CCS
T ss_pred hhhhhc-cHhheeccccccccccccc-cccCCCCCEEEecCccchh-hh-hccccccCCEEEcccccC-cccc-cC-CCC
Confidence 111111 2344444 44444444444 5555555555555555542 23 455555555555555555 3444 23 555
Q ss_pred CCCeEEccCccccccchhhccCCCCCcEecCCCCccCCcc--CccccCCCCCceecccccccCCCCCccccCCCcccEEe
Q 039595 415 SLKRVRFNQNNLVGKVYEAFGDHPNLTFLDLSQNNFDGKI--SFNWRNLPKLDTFIVSMNNIFGSIPLEIGDSSKLQFLD 492 (1078)
Q Consensus 415 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~--~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~ 492 (1078)
+|++|++++|...... .+..+++|++|++++|.+++.. +..+..+++|++|++++|.+.+ +|..+..+++|++|+
T Consensus 329 ~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~ 405 (606)
T 3vq2_A 329 FLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLD 405 (606)
T ss_dssp SCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEE
T ss_pred ccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeE
Confidence 5555555555332211 4455666666666666666553 4556666666666666666654 446778888999999
Q ss_pred ccCCccCCCcc-cccccCccCcEEeccCCccCCCcccccccccccceeeccCccccC-CCCcccccccccccccccCccc
Q 039595 493 LSSNHIVGKIP-VQLEKLFSLNKLILSLNQLSGSVPLEFGSLTELQYLDLSANKLSS-SIPKSIGNLLKLYYLNLSNNQF 570 (1078)
Q Consensus 493 Ls~N~i~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l 570 (1078)
+++|++.+..+ ..+.++++|++|++++|++++..|..|..+++|++|+|++|.+++ ..|..|..+++|++|+|++|++
T Consensus 406 l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l 485 (606)
T 3vq2_A 406 FQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQL 485 (606)
T ss_dssp CTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCC
T ss_pred CCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcC
Confidence 99999987777 678889999999999999998888899999999999999999987 4788899999999999999999
Q ss_pred ccccchhhhcccccCeeecCCCccCCcCCCCcccccccceeeccCccccCCcccccccCC-cCcEEEcccCcCCCCCCC
Q 039595 571 SHTIPIEFEKLIHLSKLDLSHNILQEEIPPQVCNMESLEKLNLSHNNLSGFIPRCFEKMR-SLSCIDICYNELQGPIPN 648 (1078)
Q Consensus 571 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~-~L~~l~l~~N~l~~~~~~ 648 (1078)
++..|..|.++++|+.|+|++|++++..|..+..+++|++|+|++|+++ .+|..+..++ +|+.|++++|++.+..+.
T Consensus 486 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 486 EQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred CccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 9888999999999999999999999888889999999999999999998 5677788887 599999999999987764
No 11
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=4e-57 Score=556.62 Aligned_cols=534 Identities=23% Similarity=0.236 Sum_probs=404.4
Q ss_pred CCCCccc----ceEeeCC---------CCeEEEeccCccccCCcccCCccCCCCCCcEEeccCCcccccCCCCCCCCCCc
Q 039595 62 ISPCSWF----GISCNHA---------GSRVISINLSTLCLNGTFQDFSFSSFPHLVNLNLSFNLFFGNIPPQIGNLSKL 128 (1078)
Q Consensus 62 ~~~c~w~----gv~C~~~---------~~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L 128 (1078)
.+||.|. .|.|.+. ..+++.++|+++.+.+. ++..|.++++|++|+|++|.+.+..|..|+++++|
T Consensus 4 ~~~c~~~~~~~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~-~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L 82 (606)
T 3vq2_A 4 LNPCIEVVPNITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKIL-KSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHL 82 (606)
T ss_dssp --CCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEE-CTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTC
T ss_pred CCCceecCCCCceEccCCCcccCCCCCCCCcCEEECCCCCcCEe-ChhhccCCccCcEEeCCCCcccccCHHHhhchhhc
Confidence 4567663 5778642 25788999999888764 44579999999999999999999889999999999
Q ss_pred ceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeecccccccC-CccCcccCCCCCcEEEccC
Q 039595 129 QNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSG-RIPSSLGNLSKLALLYLNN 207 (1078)
Q Consensus 129 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~-~~p~~l~~l~~L~~L~L~~ 207 (1078)
++|+|++|.+++..|..|+++++|++|+|++|.+++..|..++.+++|++|++++|.+.+ .+|..|+++++|++|+|++
T Consensus 83 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~ 162 (606)
T 3vq2_A 83 SNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSY 162 (606)
T ss_dssp CEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCS
T ss_pred CEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccC
Confidence 999999999998889999999999999999999997777899999999999999999986 6799999999999999999
Q ss_pred CCCCCCCCCcccccCCCC----eeecCCcccCCCCCCcccCCCCCcEEeccccccC-CCCCcccCCCcccceeecccccc
Q 039595 208 NSLFGYIPTVMGNLKSLS----TLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLS-GSIPSIIGNLKSLHQLDLIENQL 282 (1078)
Q Consensus 208 n~l~~~~p~~~~~l~~L~----~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l 282 (1078)
|++++..|..|+.+++|+ +|++++|++++..+..+... +|++|++++|.++ +.+|..++++++|+.+++..+.+
T Consensus 163 n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~ 241 (606)
T 3vq2_A 163 NYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEF 241 (606)
T ss_dssp SCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECC
T ss_pred CcceecChhhhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhcccccccccccccccc
Confidence 999998899999888776 79999999998776666655 9999999999997 46678899999999999987766
Q ss_pred cCccccccccccCCceeeecccCCCCCCCccccCCCccCeeec-cccccCccCCCCCCCCCcCcEEEccCccCCCCCCcc
Q 039595 283 SGSIPLSFGNLSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGL-YLNQLNGVIPPSIGNLSSLRNLSLFNNGLYGSIPEE 361 (1078)
Q Consensus 283 ~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L-~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 361 (1078)
.+..... . +.+..+..+..+ +++.+++ ..|.+.+.+|. +..+++|+.|++++|.+. .+| .
T Consensus 242 ~~~~~l~--------~-------~~~~~~~~l~~l-~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~-~l~-~ 302 (606)
T 3vq2_A 242 KDERNLE--------I-------FEPSIMEGLCDV-TIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIK-YLE-D 302 (606)
T ss_dssp TTSCCCS--------C-------CCGGGGTTGGGS-EEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCC-CCC-C
T ss_pred ccCCccc--------c-------cChHHhhhhhhc-cHhheeccccccccccccc-cccCCCCCEEEecCccch-hhh-h
Confidence 5321100 0 000111111111 2333333 34444444443 444555555555555543 233 4
Q ss_pred ccccCCCCeEEcccccCccccCCCCccCCCCceeecccCcCCCCCCccccccCCCCeEEccCccccccc--hhhccCCCC
Q 039595 362 IGYLKSLSELKLCKNNLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLKSLTSLKRVRFNQNNLVGKV--YEAFGDHPN 439 (1078)
Q Consensus 362 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~ 439 (1078)
+..+++|++|++++|++ +.+| .+ .+++|+.|++++|+..+.. .+..+++|++|++++|.+.+.. +..+..+++
T Consensus 303 l~~~~~L~~L~l~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~ 377 (606)
T 3vq2_A 303 VPKHFKWQSLSIIRCQL-KQFP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNS 377 (606)
T ss_dssp CCTTCCCSEEEEESCCC-SSCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSC
T ss_pred ccccccCCEEEcccccC-cccc-cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCc
Confidence 44455555555555555 2334 22 4555555555555332222 3445555555555555555443 455566666
Q ss_pred CcEecCCCCccCCccCccccCCCCCceecccccccCCCCC-ccccCCCcccEEeccCCccCCCcccccccCccCcEEecc
Q 039595 440 LTFLDLSQNNFDGKISFNWRNLPKLDTFIVSMNNIFGSIP-LEIGDSSKLQFLDLSSNHIVGKIPVQLEKLFSLNKLILS 518 (1078)
Q Consensus 440 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~-~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls 518 (1078)
|++|++++|.+.+.. ..+..+++|++|++++|.+.+..+ ..+..+++|++|++++|.+++..|..+.++++|++|+++
T Consensus 378 L~~L~L~~n~l~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 456 (606)
T 3vq2_A 378 LRHLDLSFNGAIIMS-ANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMA 456 (606)
T ss_dssp CCEEECCSCSEEEEC-CCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECT
T ss_pred ccEeECCCCccccch-hhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECC
Confidence 666666666666544 556667777777777777776666 578888899999999999988888889999999999999
Q ss_pred CCccCC-CcccccccccccceeeccCccccCCCCcccccccccccccccCcccccccchhhhcccccCeeecCCCccCCc
Q 039595 519 LNQLSG-SVPLEFGSLTELQYLDLSANKLSSSIPKSIGNLLKLYYLNLSNNQFSHTIPIEFEKLIHLSKLDLSHNILQEE 597 (1078)
Q Consensus 519 ~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 597 (1078)
+|++++ .+|..|..+++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|..+++|+.|+|++|+|+ .
T Consensus 457 ~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~ 535 (606)
T 3vq2_A 457 GNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-T 535 (606)
T ss_dssp TCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-C
T ss_pred CCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-c
Confidence 999987 47888999999999999999999888899999999999999999999888999999999999999999998 4
Q ss_pred CCCCccccc-ccceeeccCccccCCcc
Q 039595 598 IPPQVCNME-SLEKLNLSHNNLSGFIP 623 (1078)
Q Consensus 598 ~~~~~~~l~-~L~~L~L~~N~l~~~~~ 623 (1078)
+|..+..++ +|++|++++|++.+..+
T Consensus 536 ~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 536 SKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp EESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred cCHhHhhhcccCcEEEccCCCcccCCc
Confidence 666688887 59999999999987543
No 12
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.3e-56 Score=556.95 Aligned_cols=492 Identities=18% Similarity=0.232 Sum_probs=286.1
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCCccccCCCCCCCCCCCCCCC--Ccc------------cceEeeCCCCeEEEeccCccc
Q 039595 23 SDSSAEACALLNWKTSLQNQNLNSSLLSSWTLYPTNASKISP--CSW------------FGISCNHAGSRVISINLSTLC 88 (1078)
Q Consensus 23 ~~~~~~~~all~~k~~~~~~~~~~~~l~sW~~~~~~~~~~~~--c~w------------~gv~C~~~~~~v~~l~l~~~~ 88 (1078)
++..+|++||++||+++.++ +|+.+.+| ...+| |.| .||+|+. ++||+.|+|++++
T Consensus 265 ~~~~~d~~ALl~~k~~l~~~--------~W~~~~~~-~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~ 334 (876)
T 4ecn_A 265 AEYIKDYKALKAIWEALDGK--------NWRYYSGT-INNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFG 334 (876)
T ss_dssp CHHHHHHHHHHHHHHHTTGG--------GCCCCCSS-CSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTC
T ss_pred ccchHHHHHHHHHHHHcCCC--------CCCcCCCc-ccccCCccccccccccccccCcCceEecC-CCCEEEEECccCC
Confidence 34568999999999999532 89753222 12455 999 9999986 6899999999999
Q ss_pred cCCcccCCccCCCCCCcEEec-cCCcccccCCCCCC--------------------------------------------
Q 039595 89 LNGTFQDFSFSSFPHLVNLNL-SFNLFFGNIPPQIG-------------------------------------------- 123 (1078)
Q Consensus 89 l~g~~~~~~~~~l~~L~~L~L-~~n~~~~~~p~~~~-------------------------------------------- 123 (1078)
+.|.++ ..++++++|++|+| ++|.+.|..|....
T Consensus 335 L~G~ip-~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~ 413 (876)
T 4ecn_A 335 AKGRVP-DAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPE 413 (876)
T ss_dssp CEEEEC-GGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTT
T ss_pred CCCcCc-hHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcc
Confidence 999997 58999999999999 99999887543211
Q ss_pred -------CCCCcceeccCC--CccCCCCCccccCccceeEEEccCccCCCC-----------------CCcccc--cccc
Q 039595 124 -------NLSKLQNLDLGN--NQLSGVISPEIGKLNQLRRLYLDMNQLHGT-----------------IPPVIG--QLSL 175 (1078)
Q Consensus 124 -------~l~~L~~L~Ls~--n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~-----------------~p~~i~--~l~~ 175 (1078)
+...++.+.++. |+++| +|.+|+++++|++|+|++|+++|. +|+.++ .+++
T Consensus 414 ~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~ 492 (876)
T 4ecn_A 414 MKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKD 492 (876)
T ss_dssp SCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTT
T ss_pred ccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCC
Confidence 112233333433 66665 666677777777777777777662 555554 5555
Q ss_pred cceeecccccccCCccCcccCCCCCcEEEccCCC-CCC-CCCCcccccC-------CCCeeecCCcccCCCCCC--cccC
Q 039595 176 IHEFSFCHNNVSGRIPSSLGNLSKLALLYLNNNS-LFG-YIPTVMGNLK-------SLSTLDLSQNQLNGLIPC--TLDN 244 (1078)
Q Consensus 176 L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~-l~~-~~p~~~~~l~-------~L~~L~L~~N~l~~~~p~--~l~~ 244 (1078)
|++|+|++|++.+.+|..|+++++|++|+|++|+ ++| .+|..+++++ +|++|+|++|+++ .+|. .|++
T Consensus 493 L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~ 571 (876)
T 4ecn_A 493 LTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQK 571 (876)
T ss_dssp CCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTT
T ss_pred CCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhc
Confidence 5555555555555555555555555555555554 544 4454444433 5555555555555 4444 4555
Q ss_pred CCCCcEEeccccccCCCCCcccCCCcccceeecccccccCccccccccccC-CceeeecccCCCCCCCccccCCCc--cC
Q 039595 245 LSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLDLIENQLSGSIPLSFGNLSS-WTLMSLFSNSLSGSIPPILGNLKS--LS 321 (1078)
Q Consensus 245 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~l~~n~l~~~~p~~l~~l~~--L~ 321 (1078)
+++|++|+|++|+++ .+| .|+++++|+.|+|++|+++ .+|..+..+++ |+.|++++|.++ .+|..+..++. |+
T Consensus 572 L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~ 647 (876)
T 4ecn_A 572 MVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMG 647 (876)
T ss_dssp CTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEE
T ss_pred CCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCC
Confidence 555555555555555 444 4555555555555555555 44444555554 555555555554 44444444332 55
Q ss_pred eeeccccccCccCCCC---CC--CCCcCcEEEccCccCCCCCCccc-cccCCCCeEEcccccCccccCCCCccCCCCcee
Q 039595 322 TLGLYLNQLNGVIPPS---IG--NLSSLRNLSLFNNGLYGSIPEEI-GYLKSLSELKLCKNNLSGVIPHSVGNLTGLVLL 395 (1078)
Q Consensus 322 ~L~L~~N~l~~~~p~~---l~--~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 395 (1078)
.|+|++|++++.+|.. +. .+.+|+.|+|++|.+. .+|..+ ..+++|+.|+|++|+++. +|..+....
T Consensus 648 ~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~~-ip~~~~~~~----- 720 (876)
T 4ecn_A 648 SVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMTS-IPENSLKPK----- 720 (876)
T ss_dssp EEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCSC-CCTTSSSCT-----
T ss_pred EEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCCc-cChHHhccc-----
Confidence 5555555554433321 11 1224455555555554 233322 244445555555554442 222111110
Q ss_pred ecccCcCCCCCCccccccCCCCeEEccCccccccchhhc-cCCCCCcEecCCCCccCCccCccccCCCCCceeccccccc
Q 039595 396 NMCENHLFGPIPKSLKSLTSLKRVRFNQNNLVGKVYEAF-GDHPNLTFLDLSQNNFDGKISFNWRNLPKLDTFIVSMNNI 474 (1078)
Q Consensus 396 ~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i 474 (1078)
+..+.++++|++|++++|++..++...+ ..+++|+.|+|++|+++++ +..+..+++|+.|++++|.
T Consensus 721 -----------~~~l~nl~~L~~L~Ls~N~L~~lp~~l~~~~l~~L~~L~Ls~N~L~~l-p~~l~~L~~L~~L~Ls~N~- 787 (876)
T 4ecn_A 721 -----------DGNYKNTYLLTTIDLRFNKLTSLSDDFRATTLPYLSNMDVSYNCFSSF-PTQPLNSSQLKAFGIRHQR- 787 (876)
T ss_dssp -----------TSCCTTGGGCCEEECCSSCCCCCCGGGSTTTCTTCCEEECCSSCCSSC-CCGGGGCTTCCEEECCCCB-
T ss_pred -----------cccccccCCccEEECCCCCCccchHHhhhccCCCcCEEEeCCCCCCcc-chhhhcCCCCCEEECCCCC-
Confidence 0001122356666666666664433322 2566666677766666652 3344455555555555543
Q ss_pred CCCCCccccCCCcccEEeccCCccCCCcccccccCccCcEEeccCCccCCCcccccccccccceeeccCccccCCCCccc
Q 039595 475 FGSIPLEIGDSSKLQFLDLSSNHIVGKIPVQLEKLFSLNKLILSLNQLSGSVPLEFGSLTELQYLDLSANKLSSSIPKSI 554 (1078)
Q Consensus 475 ~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 554 (1078)
++++|++.+.+|..|.++++|+.|+|++|+| +.+|..+. ++|+.|||++|++....+..+
T Consensus 788 -----------------~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~ 847 (876)
T 4ecn_A 788 -----------------DAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSV 847 (876)
T ss_dssp -----------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGG
T ss_pred -----------------CcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHc
Confidence 4455677767777777777777777777777 45666554 577777777777776666666
Q ss_pred ccccccccccccCcccc
Q 039595 555 GNLLKLYYLNLSNNQFS 571 (1078)
Q Consensus 555 ~~l~~L~~L~Ls~N~l~ 571 (1078)
.....+..+.|.+|++.
T Consensus 848 ~~~~~~~~~~L~~n~~~ 864 (876)
T 4ecn_A 848 CPYIEAGMYVLLYDKTQ 864 (876)
T ss_dssp HHHHHTTCCEEECCTTS
T ss_pred cccccchheeecCCCcc
Confidence 66666777777777665
No 13
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.4e-51 Score=501.51 Aligned_cols=512 Identities=20% Similarity=0.189 Sum_probs=437.2
Q ss_pred cceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeecccccccCCccCcccCCCCCcEEEccC
Q 039595 128 LQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLYLNN 207 (1078)
Q Consensus 128 L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~ 207 (1078)
.++++-++.+++ .+|..+. +++++|+|++|++++..|..|+.+++|++|++++|++++..|..|+++++|++|+|++
T Consensus 9 ~~~~~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 85 (570)
T 2z63_A 9 NITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTG 85 (570)
T ss_dssp TTEEECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTT
T ss_pred CcEEEeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcC
Confidence 356777777887 6777664 5799999999999977788999999999999999999988888999999999999999
Q ss_pred CCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCC-CCCcccCCCcccceeecccccccCcc
Q 039595 208 NSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSG-SIPSIIGNLKSLHQLDLIENQLSGSI 286 (1078)
Q Consensus 208 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~ 286 (1078)
|++++..|..|+++++|++|++++|++++..+..++++++|++|+|++|.+++ .+|..|+++++|++|++++|++++..
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~ 165 (570)
T 2z63_A 86 NPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIY 165 (570)
T ss_dssp CCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEEC
T ss_pred CcCCccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceec
Confidence 99998888999999999999999999998777679999999999999999987 46899999999999999999999888
Q ss_pred ccccccccCC----ceeeecccCCCCCCCccccCCCccCeeeccccccCc-cCCCCCCCCCcCcEEEccCccCC------
Q 039595 287 PLSFGNLSSW----TLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLNG-VIPPSIGNLSSLRNLSLFNNGLY------ 355 (1078)
Q Consensus 287 p~~~~~l~~L----~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~Ls~N~l~------ 355 (1078)
|..|+.+.+| ..+++++|.+++..|..+..+ +|+.|++++|.... .++..+..+++++.+.+.-+.+.
T Consensus 166 ~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~ 244 (570)
T 2z63_A 166 CTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLE 244 (570)
T ss_dssp GGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCE
T ss_pred HHHccchhccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhh
Confidence 8899999988 899999999998888888766 89999999885432 23444556666666655433222
Q ss_pred CCCCccccccC--CCCeEEcccc-cCccccCCCCccCCCCceeecccCcCCCCCCccccccCCCCeEEccCccccccchh
Q 039595 356 GSIPEEIGYLK--SLSELKLCKN-NLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLKSLTSLKRVRFNQNNLVGKVYE 432 (1078)
Q Consensus 356 ~~~p~~~~~l~--~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~ 432 (1078)
......+..+. +++.+++++| .+.+..|..+..+++|+.|++++|.+. .+|..+..+ +|++|++++|.+..++.
T Consensus 245 ~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~~l~~- 321 (570)
T 2z63_A 245 KFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFGQFPT- 321 (570)
T ss_dssp ECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCSSCCB-
T ss_pred hcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCcccccCc-
Confidence 11122233332 3567777777 777788888888999999999999887 477778888 89999999998886654
Q ss_pred hccCCCCCcEecCCCCccCCccCccccCCCCCceecccccccCCCC--CccccCCCcccEEeccCCccCCCcccccccCc
Q 039595 433 AFGDHPNLTFLDLSQNNFDGKISFNWRNLPKLDTFIVSMNNIFGSI--PLEIGDSSKLQFLDLSSNHIVGKIPVQLEKLF 510 (1078)
Q Consensus 433 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~--~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~ 510 (1078)
..+++|+.|++++|.+....+. ..+++|++|++++|.+++.. +..+..+++|++|++++|.+++..+. +..++
T Consensus 322 --~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~ 396 (570)
T 2z63_A 322 --LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLE 396 (570)
T ss_dssp --CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCT
T ss_pred --ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccC
Confidence 4668899999999988765544 77899999999999988654 67788999999999999999965554 99999
Q ss_pred cCcEEeccCCccCCCcc-cccccccccceeeccCccccCCCCcccccccccccccccCcccc-cccchhhhcccccCeee
Q 039595 511 SLNKLILSLNQLSGSVP-LEFGSLTELQYLDLSANKLSSSIPKSIGNLLKLYYLNLSNNQFS-HTIPIEFEKLIHLSKLD 588 (1078)
Q Consensus 511 ~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~ 588 (1078)
+|+.|++++|++++..+ ..|..+++|++|+|++|.+.+..|..+.++++|++|+|++|+++ +.+|..|..+++|+.|+
T Consensus 397 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~ 476 (570)
T 2z63_A 397 QLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLD 476 (570)
T ss_dssp TCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEE
T ss_pred CCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEE
Confidence 99999999999997766 57899999999999999999999999999999999999999997 57899999999999999
Q ss_pred cCCCccCCcCCCCcccccccceeeccCccccCCcccccccCCcCcEEEcccCcCCCCCCCCcc
Q 039595 589 LSHNILQEEIPPQVCNMESLEKLNLSHNNLSGFIPRCFEKMRSLSCIDICYNELQGPIPNSTV 651 (1078)
Q Consensus 589 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~l~l~~N~l~~~~~~~~~ 651 (1078)
|++|++++..|..+..+++|++|+|++|++++.+|..|..+++|+.|++++|+++|.+|....
T Consensus 477 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~ 539 (570)
T 2z63_A 477 LSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDY 539 (570)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHH
T ss_pred CCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchHH
Confidence 999999998899999999999999999999999999999999999999999999999987543
No 14
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.6e-51 Score=500.42 Aligned_cols=475 Identities=22% Similarity=0.234 Sum_probs=327.1
Q ss_pred cCCCCCCCCCCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeecccccccCCccCcccC
Q 039595 117 NIPPQIGNLSKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGN 196 (1078)
Q Consensus 117 ~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~ 196 (1078)
.+|..+. ++|++|+|++|++++..|.+|+++++|++|+|++|++++..|..|+.+++|++|++++|.+++..|..|++
T Consensus 19 ~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 96 (549)
T 2z81_A 19 SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGP 96 (549)
T ss_dssp SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTT
T ss_pred cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhcc
Confidence 4566554 78999999999999887888999999999999999998777778888888888888888888777667888
Q ss_pred CCCCcEEEccCCCCCC-CCCCcccccCCCCeeecCCcccCCCC-CCcccCCCCCcEEeccccccCCCCCcccCCCcccce
Q 039595 197 LSKLALLYLNNNSLFG-YIPTVMGNLKSLSTLDLSQNQLNGLI-PCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQ 274 (1078)
Q Consensus 197 l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 274 (1078)
+++|++|+|++|.+++ .+|..++++++|++|++++|++.+.+ +..|.++++|++|++++|++++.+|..++++++|+.
T Consensus 97 l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 176 (549)
T 2z81_A 97 LSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHH 176 (549)
T ss_dssp CTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEE
T ss_pred CCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCce
Confidence 8888888888888775 35667777888888888887743333 356777777777777777777777777777777777
Q ss_pred eecccccccCccccccccccCCceeeecccCCCCCCCccccCCCccCeeeccccccCccCCCCCCCCCcCcEEEccCccC
Q 039595 275 LDLIENQLSGSIPLSFGNLSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLNGVIPPSIGNLSSLRNLSLFNNGL 354 (1078)
Q Consensus 275 L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 354 (1078)
|+++.|.+....+..+..+++|+.|++++|++++.... .......+++|+.|++++|.+
T Consensus 177 L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~---------------------~~~~~~~~~~L~~L~l~~n~l 235 (549)
T 2z81_A 177 LTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFS---------------------PLPVDEVSSPMKKLAFRGSVL 235 (549)
T ss_dssp EEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCC---------------------CCSSCCCCCCCCEEEEESCEE
T ss_pred EecccCcccccchhhHhhcccccEEEccCCcccccccc---------------------ccchhhhhhcccceecccccc
Confidence 77777776533222234455555555555555542100 001122344555555555555
Q ss_pred CCCCC----ccccccCCCCeEEcccccCcccc------CCCCccCCCCceeecccCcCCCC-----CCccccccCCCCeE
Q 039595 355 YGSIP----EEIGYLKSLSELKLCKNNLSGVI------PHSVGNLTGLVLLNMCENHLFGP-----IPKSLKSLTSLKRV 419 (1078)
Q Consensus 355 ~~~~p----~~~~~l~~L~~L~L~~N~l~~~~------p~~~~~l~~L~~L~L~~N~l~~~-----~~~~l~~l~~L~~L 419 (1078)
.+..+ ..+..+++|+.+++++|.+.+.. ...+..+.+|+.|++.++.+... .+..+....+|++|
T Consensus 236 ~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L 315 (549)
T 2z81_A 236 TDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRI 315 (549)
T ss_dssp EHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEE
T ss_pred chhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEE
Confidence 44322 22344555666666666554421 12234455555666655554321 12222333455555
Q ss_pred EccCccccccchhhccCCCCCcEecCCCCccCCccCccccCCCCCceecccccccCCCCC---ccccCCCcccEEeccCC
Q 039595 420 RFNQNNLVGKVYEAFGDHPNLTFLDLSQNNFDGKISFNWRNLPKLDTFIVSMNNIFGSIP---LEIGDSSKLQFLDLSSN 496 (1078)
Q Consensus 420 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~---~~~~~l~~L~~L~Ls~N 496 (1078)
++++|.+..++...+..+++|++|++++|++. +..| ..++.+++|++|+|++|
T Consensus 316 ~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~l~------------------------~~~~~~~~~~~~l~~L~~L~Ls~N 371 (549)
T 2z81_A 316 TVENSKVFLVPCSFSQHLKSLEFLDLSENLMV------------------------EEYLKNSACKGAWPSLQTLVLSQN 371 (549)
T ss_dssp EEESSCCCCCCHHHHHHCTTCCEEECCSSCCC------------------------HHHHHHHTCTTSSTTCCEEECTTS
T ss_pred EeccCccccCCHHHHhcCccccEEEccCCccc------------------------cccccchhhhhccccCcEEEccCC
Confidence 55555555444444444555555555555544 3332 23566778888888888
Q ss_pred ccCCCcc--cccccCccCcEEeccCCccCCCcccccccccccceeeccCccccCCCCcccccccccccccccCccccccc
Q 039595 497 HIVGKIP--VQLEKLFSLNKLILSLNQLSGSVPLEFGSLTELQYLDLSANKLSSSIPKSIGNLLKLYYLNLSNNQFSHTI 574 (1078)
Q Consensus 497 ~i~~~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 574 (1078)
+|++..+ ..+..+++|++|++++|+++ .+|..+..+++|++|+|++|+++. +|..+. ++|++|+|++|+|++.+
T Consensus 372 ~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~~--~~L~~L~Ls~N~l~~~~ 447 (549)
T 2z81_A 372 HLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV-VKTCIP--QTLEVLDVSNNNLDSFS 447 (549)
T ss_dssp CCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC-CCTTSC--TTCSEEECCSSCCSCCC
T ss_pred cccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCccc-ccchhc--CCceEEECCCCChhhhc
Confidence 8876543 45788888889999999888 567788888899999999998874 444332 57999999999998643
Q ss_pred chhhhcccccCeeecCCCccCCcCCCCcccccccceeeccCccccCCcccccccCCcCcEEEcccCcCCCCCCC
Q 039595 575 PIEFEKLIHLSKLDLSHNILQEEIPPQVCNMESLEKLNLSHNNLSGFIPRCFEKMRSLSCIDICYNELQGPIPN 648 (1078)
Q Consensus 575 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~l~l~~N~l~~~~~~ 648 (1078)
..+++|++|+|++|+|+ .+|. ...+++|++|+|++|++++.+|..|..+++|+.|++++|+++|.+|.
T Consensus 448 ----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 515 (549)
T 2z81_A 448 ----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 515 (549)
T ss_dssp ----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHH
T ss_pred ----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCcc
Confidence 57889999999999998 4665 46789999999999999999998999999999999999999998874
No 15
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.2e-51 Score=500.44 Aligned_cols=492 Identities=21% Similarity=0.212 Sum_probs=368.3
Q ss_pred CCCcEEeccCCcccccCCCCCCCCCCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeec
Q 039595 102 PHLVNLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSF 181 (1078)
Q Consensus 102 ~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l 181 (1078)
+++++|+|++|.+.+..+..|+++++|++|||++|++++..|..|+++++|++|+|++|++++..|..|+.+++|++|++
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 57999999999999888888999999999999999999877788999999999999999999777788999999999999
Q ss_pred ccccccCCccCcccCCCCCcEEEccCCCCCC-CCCCcccccCCCCeeecCCcccCCCCCCcccCCCCC----cEEecccc
Q 039595 182 CHNNVSGRIPSSLGNLSKLALLYLNNNSLFG-YIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNL----DTLFLYKN 256 (1078)
Q Consensus 182 ~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L----~~L~L~~N 256 (1078)
++|++++..+..++++++|++|+|++|.+++ .+|..|+++++|++|++++|++++..|..++.+++| +.|++++|
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n 187 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCC
Confidence 9999987666679999999999999999987 468899999999999999999998888888888888 88999999
Q ss_pred ccCCCCCcccCCCcccceeecccccccC-ccccccccccCCceeeecccCCCC------CCCccccCCC--ccCeeeccc
Q 039595 257 SLSGSIPSIIGNLKSLHQLDLIENQLSG-SIPLSFGNLSSWTLMSLFSNSLSG------SIPPILGNLK--SLSTLGLYL 327 (1078)
Q Consensus 257 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~l~~n~l~~------~~p~~l~~l~--~L~~L~L~~ 327 (1078)
.+++..|..+..+ +|+.|++++|.... .+|..+..++.++.+.+..+.+.. .....+..+. .++.+++++
T Consensus 188 ~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 266 (570)
T 2z63_A 188 PMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 266 (570)
T ss_dssp CCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEE
T ss_pred CceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhc
Confidence 9998878777766 79999999886542 345566777777766554433221 1112222222 234455555
Q ss_pred c-ccCccCCCCCCCCCcCcEEEccCccCCCCCCccccccCCCCeEEcccccCccccCCCCccCCCCceeecccCcCCCCC
Q 039595 328 N-QLNGVIPPSIGNLSSLRNLSLFNNGLYGSIPEEIGYLKSLSELKLCKNNLSGVIPHSVGNLTGLVLLNMCENHLFGPI 406 (1078)
Q Consensus 328 N-~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 406 (1078)
| .+.+..|..+..+++|+.|++++|.+. .+|..+..+ +|++|++++|.+. .+|. ..+++|+.|++++|.+.+..
T Consensus 267 ~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~ 341 (570)
T 2z63_A 267 LDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAF 341 (570)
T ss_dssp TTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBC
T ss_pred chhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCc--ccccccCEEeCcCCcccccc
Confidence 5 455555666666666666666666665 455555555 6666666666665 2332 34555666666666554433
Q ss_pred CccccccCCCCeEEccCccccccchhhccCCCCCcEecCCCCccCCccCccccCCCCCceecccccccCCCCCccccCCC
Q 039595 407 PKSLKSLTSLKRVRFNQNNLVGKVYEAFGDHPNLTFLDLSQNNFDGKISFNWRNLPKLDTFIVSMNNIFGSIPLEIGDSS 486 (1078)
Q Consensus 407 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~ 486 (1078)
+. ..+++|++|++++|.+..... .+..+..+++|++|++++|.+.+..+. +..++
T Consensus 342 ~~--~~~~~L~~L~l~~n~l~~~~~----------------------~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~ 396 (570)
T 2z63_A 342 SE--VDLPSLEFLDLSRNGLSFKGC----------------------CSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLE 396 (570)
T ss_dssp CC--CBCTTCCEEECCSSCCBEEEE----------------------EEHHHHTCSCCCEEECCSCSEEEEEEE-EETCT
T ss_pred cc--ccCCCCCEEeCcCCccCcccc----------------------ccccccccCccCEEECCCCcccccccc-ccccC
Confidence 33 344445555554444443320 023344455555555555555443333 77778
Q ss_pred cccEEeccCCccCCCcc-cccccCccCcEEeccCCccCCCcccccccccccceeeccCcccc-CCCCccccccccccccc
Q 039595 487 KLQFLDLSSNHIVGKIP-VQLEKLFSLNKLILSLNQLSGSVPLEFGSLTELQYLDLSANKLS-SSIPKSIGNLLKLYYLN 564 (1078)
Q Consensus 487 ~L~~L~Ls~N~i~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~ 564 (1078)
+|++|++++|.+.+..+ ..+..+++|++|++++|++++..|..|..+++|++|+|++|.++ +.+|..+..+++|++|+
T Consensus 397 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~ 476 (570)
T 2z63_A 397 QLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLD 476 (570)
T ss_dssp TCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEE
T ss_pred CCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEE
Confidence 88888888888876655 56788888999999999888888888888999999999999987 56888899999999999
Q ss_pred ccCcccccccchhhhcccccCeeecCCCccCCcCCCCcccccccceeeccCccccCCccc
Q 039595 565 LSNNQFSHTIPIEFEKLIHLSKLDLSHNILQEEIPPQVCNMESLEKLNLSHNNLSGFIPR 624 (1078)
Q Consensus 565 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 624 (1078)
|++|++++..|..|..+++|+.|+|++|++++..+..+..+++|++|++++|++++..|.
T Consensus 477 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 477 LSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred CCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 999999988888999999999999999999988777888999999999999999987653
No 16
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=7.9e-52 Score=460.32 Aligned_cols=255 Identities=27% Similarity=0.367 Sum_probs=214.8
Q ss_pred cCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEEE
Q 039595 751 DDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFLV 829 (1078)
Q Consensus 751 ~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 829 (1078)
..|+..++||+|+||+||+|..+ +|+.||||++..... ...+.+.+|+.++++++|||||+++++|.+++.+|||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~----~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iv 149 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ----QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV 149 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC----SSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch----hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 56999999999999999999664 799999999975432 2345688999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccccccC
Q 039595 830 CEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVEP 909 (1078)
Q Consensus 830 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~~ 909 (1078)
||||+||+|.+++.+ ..+++.++..++.||+.||+|||++ +|+||||||+|||++.+|.+||+|||+|+.+..
T Consensus 150 mEy~~gg~L~~~l~~----~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 222 (346)
T 4fih_A 150 MEFLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 222 (346)
T ss_dssp ECCCTTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EeCCCCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCC
Confidence 999999999999943 4599999999999999999999999 999999999999999999999999999998876
Q ss_pred CCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCCCcc
Q 039595 910 YSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSPGV 989 (1078)
Q Consensus 910 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 989 (1078)
........+||+.|||||++.+..|+.++||||+||++|||++|++||..... ..... .+.....+.... .
T Consensus 223 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~~~~~---~i~~~~~~~~~~----~ 293 (346)
T 4fih_A 223 EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMK---MIRDNLPPRLKN----L 293 (346)
T ss_dssp SSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHH---HHHHSSCCCCSC----G
T ss_pred CCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHH---HHHcCCCCCCCc----c
Confidence 55566778999999999999999999999999999999999999999753221 11111 112222222211 1
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 990 MDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 990 ~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
.....++.+++.+||..||++|||++|+++|||+..
T Consensus 294 ~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~ 329 (346)
T 4fih_A 294 HKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 329 (346)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGG
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcC
Confidence 122336788999999999999999999999999864
No 17
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=3.5e-52 Score=512.27 Aligned_cols=461 Identities=18% Similarity=0.234 Sum_probs=383.0
Q ss_pred CCCcEEeccCCcccccCCCCCCCCCCcceeccCCCccC------C------CCCccccCccceeEEEccCccCCCCCCcc
Q 039595 102 PHLVNLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLS------G------VISPEIGKLNQLRRLYLDMNQLHGTIPPV 169 (1078)
Q Consensus 102 ~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~------~------~~p~~~~~l~~L~~L~L~~n~l~~~~p~~ 169 (1078)
.+++.|+|++|++.|.+|+++++|++|++|||++|.+. | .+|.+. +..|+ ++++.|.+.+.+|..
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~ 157 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPRED 157 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGG
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhh
Confidence 47889999999999999999999999999999999762 2 233332 44455 555555555555544
Q ss_pred cccccccceeecccccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeeecC--CcccCCCCCCcccCCCC
Q 039595 170 IGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLS--QNQLNGLIPCTLDNLSN 247 (1078)
Q Consensus 170 i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~--~N~l~~~~p~~l~~l~~ 247 (1078)
+..+ +.++..+++....+.. .....++.+.+. .|++++ +|..|+++++
T Consensus 158 ~~~~-----------------------~~~l~~~~l~~~~~~~------~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~ 207 (636)
T 4eco_A 158 FSDL-----------------------IKDCINSDPQQKSIKK------SSRITLKDTQIGQLSNNITF-VSKAVMRLTK 207 (636)
T ss_dssp SCHH-----------------------HHHHHHHCTTSCCCCC------CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTT
T ss_pred HHHH-----------------------HHHHhhcCcccccccc------ccccchhhhhhccccCCCcc-CCHHHhcccC
Confidence 4321 1122222222222111 111223333333 577777 6777888888
Q ss_pred CcEEeccccccCCC-----------------CCcccC--CCcccceeecccccccCccccccccccCCceeeecccC-CC
Q 039595 248 LDTLFLYKNSLSGS-----------------IPSIIG--NLKSLHQLDLIENQLSGSIPLSFGNLSSWTLMSLFSNS-LS 307 (1078)
Q Consensus 248 L~~L~L~~N~l~~~-----------------~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~-l~ 307 (1078)
|++|+|++|++++. +|..++ ++++|++|+|++|.+.|.+|..|+++++|+.|++++|+ ++
T Consensus 208 L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~ 287 (636)
T 4eco_A 208 LRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGIS 287 (636)
T ss_dssp CCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSC
T ss_pred CCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCc
Confidence 88888888888764 899999 99999999999999999999999999999999999999 99
Q ss_pred C-CCCccccCC------CccCeeeccccccCccCCC--CCCCCCcCcEEEccCccCCCCCCccccccCCCCeEEcccccC
Q 039595 308 G-SIPPILGNL------KSLSTLGLYLNQLNGVIPP--SIGNLSSLRNLSLFNNGLYGSIPEEIGYLKSLSELKLCKNNL 378 (1078)
Q Consensus 308 ~-~~p~~l~~l------~~L~~L~L~~N~l~~~~p~--~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 378 (1078)
| .+|..++++ ++|++|++++|+++ .+|. .++++++|+.|++++|++.|.+| .++.+++|++|+|++|++
T Consensus 288 ~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l 365 (636)
T 4eco_A 288 GEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQI 365 (636)
T ss_dssp HHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEE
T ss_pred cccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCcc
Confidence 8 899988887 99999999999999 7888 89999999999999999999999 999999999999999999
Q ss_pred ccccCCCCccCCC-CceeecccCcCCCCCCccccccC--CCCeEEccCccccccchhhcc-------CCCCCcEecCCCC
Q 039595 379 SGVIPHSVGNLTG-LVLLNMCENHLFGPIPKSLKSLT--SLKRVRFNQNNLVGKVYEAFG-------DHPNLTFLDLSQN 448 (1078)
Q Consensus 379 ~~~~p~~~~~l~~-L~~L~L~~N~l~~~~~~~l~~l~--~L~~L~L~~N~l~~~~~~~~~-------~l~~L~~L~Ls~N 448 (1078)
+ .+|..+.++++ |++|++++|+++ .+|..+..++ +|++|++++|.+.+..+..|. .+++|++|+|++|
T Consensus 366 ~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N 443 (636)
T 4eco_A 366 T-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNN 443 (636)
T ss_dssp E-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSS
T ss_pred c-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCC
Confidence 9 78888999999 999999999998 7888887755 899999999999998888888 7889999999999
Q ss_pred ccCCccCccccCCCCCceecccccccCCCCCccccCCC-------cccEEeccCCccCCCcccccc--cCccCcEEeccC
Q 039595 449 NFDGKISFNWRNLPKLDTFIVSMNNIFGSIPLEIGDSS-------KLQFLDLSSNHIVGKIPVQLE--KLFSLNKLILSL 519 (1078)
Q Consensus 449 ~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~-------~L~~L~Ls~N~i~~~~~~~~~--~l~~L~~L~Ls~ 519 (1078)
.++.++...+..+++|++|++++|+++...+..+.... +|++|+|++|+|+ .+|..+. .+++|+.|+|++
T Consensus 444 ~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~ 522 (636)
T 4eco_A 444 QISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSY 522 (636)
T ss_dssp CCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCS
T ss_pred ccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCC
Confidence 99988888888999999999999999944434444333 9999999999999 6777776 899999999999
Q ss_pred CccCCCcccccccccccceeeccCccccCCCCcccccccccccccccCcccccccchhhhcccccCeeecCCCccCCcCC
Q 039595 520 NQLSGSVPLEFGSLTELQYLDLSANKLSSSIPKSIGNLLKLYYLNLSNNQFSHTIPIEFEKLIHLSKLDLSHNILQEEIP 599 (1078)
Q Consensus 520 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 599 (1078)
|++++ +|..+..+++|++|+|++|+ ++++|++.+.+|..|..+++|+.|+|++|+| +.+|
T Consensus 523 N~l~~-ip~~~~~l~~L~~L~Ls~N~------------------~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip 582 (636)
T 4eco_A 523 NSFSK-FPTQPLNSSTLKGFGIRNQR------------------DAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVN 582 (636)
T ss_dssp SCCSS-CCCGGGGCSSCCEEECCSCB------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCC
T ss_pred CCCCC-cChhhhcCCCCCEEECCCCc------------------ccccCcccccChHHHhcCCCCCEEECCCCcC-CccC
Confidence 99997 88899999999999999997 6889999999999999999999999999999 5678
Q ss_pred CCcccccccceeeccCccccCCc
Q 039595 600 PQVCNMESLEKLNLSHNNLSGFI 622 (1078)
Q Consensus 600 ~~~~~l~~L~~L~L~~N~l~~~~ 622 (1078)
..+. ++|++|+|++|++....
T Consensus 583 ~~~~--~~L~~L~Ls~N~l~~~~ 603 (636)
T 4eco_A 583 EKIT--PNISVLDIKDNPNISID 603 (636)
T ss_dssp SCCC--TTCCEEECCSCTTCEEE
T ss_pred HhHh--CcCCEEECcCCCCcccc
Confidence 7765 79999999999887544
No 18
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=6.8e-52 Score=461.61 Aligned_cols=258 Identities=20% Similarity=0.313 Sum_probs=209.4
Q ss_pred cCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEEE
Q 039595 751 DDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFLV 829 (1078)
Q Consensus 751 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 829 (1078)
++|++.+.||+|+||+||+|+. .+|+.||||++..... .....+.+.+|+.++++++|||||++++++++++.+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~--~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiV 101 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM--SSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIV 101 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTS--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHC--CHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence 6899999999999999999965 4799999999976543 344567899999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccccccC
Q 039595 830 CEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVEP 909 (1078)
Q Consensus 830 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~~ 909 (1078)
||||+||+|.+++... ....+++.+++.|+.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+....
T Consensus 102 mEy~~gg~L~~~i~~~-~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 177 (350)
T 4b9d_A 102 MDYCEGGDLFKRINAQ-KGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS 177 (350)
T ss_dssp EECCTTCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCH
T ss_pred EeCCCCCcHHHHHHHc-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecC
Confidence 9999999999999543 334578999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCCCcc
Q 039595 910 YSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSPGV 989 (1078)
Q Consensus 910 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 989 (1078)
........+||+.|||||++.+..|+.++||||+||++|||+||+.||..... ......+ ....+.......
T Consensus 178 ~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~--~~~~~~i------~~~~~~~~~~~~ 249 (350)
T 4b9d_A 178 TVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM--KNLVLKI------ISGSFPPVSLHY 249 (350)
T ss_dssp HHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHH------HHTCCCCCCTTS
T ss_pred CcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHHHH------HcCCCCCCCccC
Confidence 33334567899999999999999999999999999999999999999753321 1111111 111111111222
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 990 MDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 990 ~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
. .++.+++.+||++||++|||++|+++|+|+..
T Consensus 250 s---~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~ 282 (350)
T 4b9d_A 250 S---YDLRSLVSQLFKRNPRDRPSVNSILEKGFIAK 282 (350)
T ss_dssp C---HHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHT
T ss_pred C---HHHHHHHHHHccCChhHCcCHHHHhcCHHhhc
Confidence 2 35778999999999999999999999999864
No 19
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=3.2e-51 Score=448.48 Aligned_cols=256 Identities=20% Similarity=0.282 Sum_probs=212.0
Q ss_pred hcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
.++|++.+.||+|+||+||+|+. .+|+.||||++.+.... .....+.+.+|+.++++++|||||++++++++++.+|+
T Consensus 31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~-~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yi 109 (311)
T 4aw0_A 31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHII-KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYF 109 (311)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 35799999999999999999965 57999999999765322 22345678999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVE 908 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~ 908 (1078)
||||++||+|.+++++ .+.+++.++..++.||+.||+|||++ +|+||||||+|||++.+|.+||+|||+|+.+.
T Consensus 110 vmEy~~gG~L~~~i~~---~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~ 183 (311)
T 4aw0_A 110 GLSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLS 183 (311)
T ss_dssp EECCCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecC
Confidence 9999999999999943 45699999999999999999999999 99999999999999999999999999999875
Q ss_pred CCC--CCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCC
Q 039595 909 PYS--SNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPS 986 (1078)
Q Consensus 909 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 986 (1078)
... ......+||+.|||||++.+..|+.++||||+||++|||+||++||...+ .......+... +..++.
T Consensus 184 ~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--~~~~~~~i~~~----~~~~p~-- 255 (311)
T 4aw0_A 184 PESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN--EGLIFAKIIKL----EYDFPE-- 255 (311)
T ss_dssp TTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHT----CCCCCT--
T ss_pred CCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHcC----CCCCCc--
Confidence 432 23456789999999999999999999999999999999999999975322 22222222221 111211
Q ss_pred CccHHHHHHHHHHHHhcccCCCCCCCChhHH------HHHhhhh
Q 039595 987 PGVMDKLISIMEVAILCLDESPEARPTMEKG------FGHHIGY 1024 (1078)
Q Consensus 987 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~el------l~h~~~~ 1024 (1078)
... .++.+++.+||.+||++|||++|+ ++|||+.
T Consensus 256 -~~s---~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~ 295 (311)
T 4aw0_A 256 -KFF---PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295 (311)
T ss_dssp -TCC---HHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGT
T ss_pred -ccC---HHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcC
Confidence 111 257789999999999999999985 6677754
No 20
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.3e-50 Score=438.01 Aligned_cols=254 Identities=22% Similarity=0.271 Sum_probs=195.6
Q ss_pred cCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEEE
Q 039595 751 DDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFLV 829 (1078)
Q Consensus 751 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 829 (1078)
++|++.+.||+|+||+||+|.. .+|+.||||++.+.... .....+.+.+|+.++++++|||||++++++++++..|+|
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLA-KSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcC-CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 6899999999999999999965 47999999999765433 233466799999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccccccC
Q 039595 830 CEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVEP 909 (1078)
Q Consensus 830 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~~ 909 (1078)
|||+ +|+|.+++.+ .+.+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+....
T Consensus 92 mEy~-~g~L~~~l~~---~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~ 164 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQ---RDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp EECC-CEEHHHHHHH---SCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC-----
T ss_pred EeCC-CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCC
Confidence 9999 6799999843 35699999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCceeeccccccccccccccCCC-CccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCCCc
Q 039595 910 YSSNRTEFVGTFGYAAPEIAYTMRA-TEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSPG 988 (1078)
Q Consensus 910 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1078)
. ......+||+.|||||++.+..| +.++||||+||++|||+||+.||.... .......+... .+.++. .
T Consensus 165 ~-~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~--~~~~~~~i~~~----~~~~p~---~ 234 (275)
T 3hyh_A 165 G-NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES--IPVLFKNISNG----VYTLPK---F 234 (275)
T ss_dssp -----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHT----CCCCCT---T
T ss_pred C-CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC--HHHHHHHHHcC----CCCCCC---C
Confidence 2 23456789999999999998876 589999999999999999999975322 22222221111 111111 1
Q ss_pred cHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 989 VMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 989 ~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
.. .++.+++.+||+.||++|||++|+++|||+..
T Consensus 235 ~s---~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~ 268 (275)
T 3hyh_A 235 LS---PGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV 268 (275)
T ss_dssp SC---HHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHT
T ss_pred CC---HHHHHHHHHHccCChhHCcCHHHHHcCccccc
Confidence 11 25678999999999999999999999999753
No 21
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.3e-50 Score=461.61 Aligned_cols=255 Identities=27% Similarity=0.365 Sum_probs=215.0
Q ss_pred cCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEEE
Q 039595 751 DDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFLV 829 (1078)
Q Consensus 751 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 829 (1078)
+.|+..++||+|+||+||+|.. .+|+.||||++.... ....+.+.+|+.++++++|||||+++++|.+++.+|||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~----~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iV 226 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK----QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV 226 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTT----CSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccc----hhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEE
Confidence 5799999999999999999966 479999999997543 22345688999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccccccC
Q 039595 830 CEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVEP 909 (1078)
Q Consensus 830 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~~ 909 (1078)
||||+||+|.++++. ..+++.++..|+.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+.+..
T Consensus 227 mEy~~gG~L~~~i~~----~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~ 299 (423)
T 4fie_A 227 MEFLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 299 (423)
T ss_dssp EECCTTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCS
T ss_pred EeCCCCCcHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCC
Confidence 999999999999943 4589999999999999999999999 999999999999999999999999999998876
Q ss_pred CCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCCCcc
Q 039595 910 YSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSPGV 989 (1078)
Q Consensus 910 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 989 (1078)
........+||+.|||||++.+..|+.++||||+||++|||++|+.||..... .... ..+.....+.+... ...
T Consensus 300 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~~~~---~~i~~~~~~~~~~~-~~~ 373 (423)
T 4fie_A 300 EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAM---KMIRDNLPPRLKNL-HKV 373 (423)
T ss_dssp SCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHH---HHHHHSCCCCCSCT-TSS
T ss_pred CCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHH---HHHHcCCCCCCccc-ccC
Confidence 65666778999999999999999999999999999999999999999753221 1111 11222222222211 112
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 990 MDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 990 ~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
..++.+++.+||..||++|||++|+++|+|+..
T Consensus 374 ---s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~ 406 (423)
T 4fie_A 374 ---SPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 406 (423)
T ss_dssp ---CHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGG
T ss_pred ---CHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcC
Confidence 235778999999999999999999999999864
No 22
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=3e-50 Score=439.25 Aligned_cols=252 Identities=21% Similarity=0.310 Sum_probs=201.8
Q ss_pred CccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeec----CCeeEE
Q 039595 754 DEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSN----ARHSFL 828 (1078)
Q Consensus 754 ~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~l 828 (1078)
++.++||+|+||+||+|.+ .++..||+|++..... .....+.|.+|+.++++++|||||+++++|++ +..+|+
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~--~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~l 106 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL--TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEE
Confidence 5667899999999999965 4789999999976532 34456789999999999999999999999864 356899
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCC--cEecCCCCCCeeeCC-CCcEEEecccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPS--IIHRDISSKNVLLDL-EFEAHVSDFGIAK 905 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlk~~NIll~~-~~~~kl~DfG~a~ 905 (1078)
|||||+||+|.+++++ .+.+++..+..++.||+.||+|||++ + |+||||||+|||++. +|.+||+|||+|+
T Consensus 107 vmEy~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~ylH~~---~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~ 180 (290)
T 3fpq_A 107 VTELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp EEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCCCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred EEeCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCEEecccChhheeEECCCCCEEEEeCcCCE
Confidence 9999999999999953 45689999999999999999999998 7 999999999999984 7999999999998
Q ss_pred cccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCC
Q 039595 906 FVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTP 985 (1078)
Q Consensus 906 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 985 (1078)
.... ......+||+.|||||++.+ .|+.++|||||||++|||+||+.||...... ...... +.....+..
T Consensus 181 ~~~~--~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~-~~~~~~------i~~~~~~~~ 250 (290)
T 3fpq_A 181 LKRA--SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA-AQIYRR------VTSGVKPAS 250 (290)
T ss_dssp GCCT--TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH-HHHHHH------HTTTCCCGG
T ss_pred eCCC--CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcH-HHHHHH------HHcCCCCCC
Confidence 6432 34556789999999998865 6999999999999999999999997532211 111111 111111111
Q ss_pred CCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 986 SPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 986 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
.+.. ...++.+++.+||++||++|||++|+++|||+..
T Consensus 251 ~~~~--~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~ 288 (290)
T 3fpq_A 251 FDKV--AIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288 (290)
T ss_dssp GGGC--CCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred CCcc--CCHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence 0100 1125778999999999999999999999999754
No 23
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=8.5e-50 Score=497.87 Aligned_cols=488 Identities=17% Similarity=0.206 Sum_probs=344.1
Q ss_pred CCCcEEeccCCcccccCCCCCCCCCCcceecc-CCCccCCCCCccccCc---------cceeEEEcc-------CccCCC
Q 039595 102 PHLVNLNLSFNLFFGNIPPQIGNLSKLQNLDL-GNNQLSGVISPEIGKL---------NQLRRLYLD-------MNQLHG 164 (1078)
Q Consensus 102 ~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L-s~n~l~~~~p~~~~~l---------~~L~~L~L~-------~n~l~~ 164 (1078)
.+++.|+|++|++.|.+|+.|++|++|++||| ++|.++|..|-..... ..++..++. ...+.+
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 57899999999999999999999999999999 8899988754321111 011110000 000110
Q ss_pred -----------CCCcccccccccceeeccc--ccccCCccCcccCCCCCcEEEccCCCCCC-CCCCcccccCCCCeeecC
Q 039595 165 -----------TIPPVIGQLSLIHEFSFCH--NNVSGRIPSSLGNLSKLALLYLNNNSLFG-YIPTVMGNLKSLSTLDLS 230 (1078)
Q Consensus 165 -----------~~p~~i~~l~~L~~L~l~~--n~~~~~~p~~l~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~ 230 (1078)
..+........++.+.+.. |++++ +|..|++|++|++|+|++|++++ .+|..+ +.++
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~--------~~~s 473 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDW--------EDAN 473 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSC--------SCTT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccc--------cccc
Confidence 0111111222334444433 66666 67777777777777777777766 122111 1122
Q ss_pred CcccCCCCCCccc--CCCCCcEEeccccccCCCCCcccCCCcccceeeccccc-ccC-cccccccccc-------CCcee
Q 039595 231 QNQLNGLIPCTLD--NLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLDLIENQ-LSG-SIPLSFGNLS-------SWTLM 299 (1078)
Q Consensus 231 ~N~l~~~~p~~l~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l~-------~L~~L 299 (1078)
.|.+++.+|..++ ++++|++|+|++|++.+.+|..|+++++|+.|+|++|+ ++| .+|..++.++ +|+.|
T Consensus 474 ~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L 553 (876)
T 4ecn_A 474 SDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIF 553 (876)
T ss_dssp SHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEE
T ss_pred cccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEE
Confidence 2444455777776 78888888888888877888888888888888888887 777 7777666665 88888
Q ss_pred eecccCCCCCCCc--cccCCCccCeeeccccccCccCCCCCCCCCcCcEEEccCccCCCCCCccccccCC-CCeEEcccc
Q 039595 300 SLFSNSLSGSIPP--ILGNLKSLSTLGLYLNQLNGVIPPSIGNLSSLRNLSLFNNGLYGSIPEEIGYLKS-LSELKLCKN 376 (1078)
Q Consensus 300 ~l~~n~l~~~~p~--~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~L~~N 376 (1078)
++++|.++ .+|. .++++++|++|+|++|+++ .+| .|+.+++|+.|+|++|++. .+|..+..+++ |+.|+|++|
T Consensus 554 ~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N 629 (876)
T 4ecn_A 554 YMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHN 629 (876)
T ss_dssp ECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSS
T ss_pred EeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCC
Confidence 88888888 7777 7888888888888888888 666 7888888888888888888 78888888888 888888888
Q ss_pred cCccccCCCCccCCC--CceeecccCcCCCCCCccc---c--ccCCCCeEEccCccccccchhhccCCCCCcEecCCCCc
Q 039595 377 NLSGVIPHSVGNLTG--LVLLNMCENHLFGPIPKSL---K--SLTSLKRVRFNQNNLVGKVYEAFGDHPNLTFLDLSQNN 449 (1078)
Q Consensus 377 ~l~~~~p~~~~~l~~--L~~L~L~~N~l~~~~~~~l---~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 449 (1078)
+++ .+|..+..++. |+.|++++|++.+.+|... . .+++|+.|++++|.+..++...+..+++|+.|+|++|+
T Consensus 630 ~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~ 708 (876)
T 4ecn_A 630 KLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNL 708 (876)
T ss_dssp CCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCC
T ss_pred CCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCc
Confidence 887 66777776654 8888888888887665432 2 23467778888888877777777777788888888887
Q ss_pred cCCccCccccCCCCCceecccccccCCCCCccccCCCcccEEeccCCccCCCcccccc--cCccCcEEeccCCccCCCcc
Q 039595 450 FDGKISFNWRNLPKLDTFIVSMNNIFGSIPLEIGDSSKLQFLDLSSNHIVGKIPVQLE--KLFSLNKLILSLNQLSGSVP 527 (1078)
Q Consensus 450 l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~~ 527 (1078)
|+.++...+.... ..+.++++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|+|++ +|
T Consensus 709 L~~ip~~~~~~~~-----------------~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp 769 (876)
T 4ecn_A 709 MTSIPENSLKPKD-----------------GNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FP 769 (876)
T ss_dssp CSCCCTTSSSCTT-----------------SCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CC
T ss_pred CCccChHHhcccc-----------------ccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cc
Confidence 7744433322111 11234458888888888888 5677776 88888888888888886 67
Q ss_pred cccccccccceeeccCccccCCCCcccccccccccccccCcccccccchhhhcccccCeeecCCCccCCcCCCCcccccc
Q 039595 528 LEFGSLTELQYLDLSANKLSSSIPKSIGNLLKLYYLNLSNNQFSHTIPIEFEKLIHLSKLDLSHNILQEEIPPQVCNMES 607 (1078)
Q Consensus 528 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 607 (1078)
..+..+++|+.|+|++|+ ++++|++.+.+|..|..+++|+.|+|++|+| +.+|..+. ++
T Consensus 770 ~~l~~L~~L~~L~Ls~N~------------------~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~ 828 (876)
T 4ecn_A 770 TQPLNSSQLKAFGIRHQR------------------DAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQ 828 (876)
T ss_dssp CGGGGCTTCCEEECCCCB------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SS
T ss_pred hhhhcCCCCCEEECCCCC------------------CcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CC
Confidence 788888888888888876 5677777777777777777777777777777 45666654 57
Q ss_pred cceeeccCccccCCcccccccCCcCcEEEcccCcCC
Q 039595 608 LEKLNLSHNNLSGFIPRCFEKMRSLSCIDICYNELQ 643 (1078)
Q Consensus 608 L~~L~L~~N~l~~~~~~~l~~l~~L~~l~l~~N~l~ 643 (1078)
|+.|+|++|++....+..+.....+..+.|.+|++.
T Consensus 829 L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~ 864 (876)
T 4ecn_A 829 LYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQ 864 (876)
T ss_dssp SCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTTS
T ss_pred CCEEECCCCCCCccChHHccccccchheeecCCCcc
Confidence 778888888777666666666666667777777665
No 24
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.3e-50 Score=444.11 Aligned_cols=255 Identities=25% Similarity=0.296 Sum_probs=204.4
Q ss_pred cCCCccceeccCCceeEEEEEeC----CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCee
Q 039595 751 DDFDEKFCIGKGGQGSVYKAELP----SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHS 826 (1078)
Q Consensus 751 ~~~~~~~~lG~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 826 (1078)
++|++.+.||+|+||+||+|+.. +++.||||++++..... .+...+.+|+.++++++|||||++++++++++.+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~--~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 101 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKV--RDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKL 101 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEE--EECC------CCCCCCCCTTEECEEEEEEETTEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcCh--HHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEE
Confidence 57999999999999999999652 57899999997654322 2234678899999999999999999999999999
Q ss_pred EEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccc
Q 039595 827 FLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKF 906 (1078)
Q Consensus 827 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~ 906 (1078)
|+|||||+||+|.+++.+ .+.+++.++..++.||+.||+|||++ +|+||||||+|||++.+|.+||+|||+|+.
T Consensus 102 ~ivmEy~~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~ 175 (304)
T 3ubd_A 102 YLILDFLRGGDLFTRLSK---EVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKE 175 (304)
T ss_dssp EEEECCCTTCEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC
T ss_pred EEEEEcCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEeccccccee
Confidence 999999999999999953 45699999999999999999999999 999999999999999999999999999987
Q ss_pred ccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCC
Q 039595 907 VEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPS 986 (1078)
Q Consensus 907 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 986 (1078)
...........+||+.|||||++.+..|+.++||||+||++|||+||+.||...+ .......+... .+.++
T Consensus 176 ~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~--~~~~~~~i~~~----~~~~p--- 246 (304)
T 3ubd_A 176 SIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD--RKETMTMILKA----KLGMP--- 246 (304)
T ss_dssp -----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHC----CCCCC---
T ss_pred ccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcC--HHHHHHHHHcC----CCCCC---
Confidence 6554555567789999999999999999999999999999999999999975332 22222222111 11111
Q ss_pred CccHHHHHHHHHHHHhcccCCCCCCCC-----hhHHHHHhhhhh
Q 039595 987 PGVMDKLISIMEVAILCLDESPEARPT-----MEKGFGHHIGYC 1025 (1078)
Q Consensus 987 ~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~ell~h~~~~~ 1025 (1078)
.... .++.+++.+||++||++||| ++|+++|||+..
T Consensus 247 ~~~s---~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~ 287 (304)
T 3ubd_A 247 QFLS---PEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFST 287 (304)
T ss_dssp TTSC---HHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTT
T ss_pred CcCC---HHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccC
Confidence 1112 25778999999999999998 579999999864
No 25
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=2.8e-49 Score=434.75 Aligned_cols=258 Identities=24% Similarity=0.375 Sum_probs=202.3
Q ss_pred hhcCCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
..++|++.++||+|+||+||+|+++ ..||||+++... ......+.|.+|+.++++++|||||+++|++.+ +..||
T Consensus 34 ~~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~--~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~i 108 (307)
T 3omv_A 34 EASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVD--PTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAI 108 (307)
T ss_dssp CTTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSS--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEE
T ss_pred cHHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecC--CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEE
Confidence 3467888999999999999999875 369999987542 234556789999999999999999999999865 56899
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVE 908 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~ 908 (1078)
|||||++|+|.++++.. ...+++.++..|+.|||.||+|||++ +||||||||+|||+++++.+||+|||+|+...
T Consensus 109 VmEy~~gGsL~~~l~~~--~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~ 183 (307)
T 3omv_A 109 VTQWCEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKS 183 (307)
T ss_dssp EEECCSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC--
T ss_pred EEEcCCCCCHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecc
Confidence 99999999999999543 34699999999999999999999999 99999999999999999999999999998765
Q ss_pred CCC--CCceeecccccccccccccc---CCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCC
Q 039595 909 PYS--SNRTEFVGTFGYAAPEIAYT---MRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLS 983 (1078)
Q Consensus 909 ~~~--~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 983 (1078)
... ......+||+.|||||++.+ +.|+.++|||||||++|||+||+.||...... ...... .......|...
T Consensus 184 ~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~-~~~~~~--~~~~~~~p~~~ 260 (307)
T 3omv_A 184 RWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR-DQIIFM--VGRGYASPDLS 260 (307)
T ss_dssp ----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-HHHHHH--HHTTCCCCCST
T ss_pred cCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH-HHHHHH--HhcCCCCCCcc
Confidence 432 22345689999999999864 46899999999999999999999997543221 111111 11122233333
Q ss_pred CCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhh
Q 039595 984 TPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHI 1022 (1078)
Q Consensus 984 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~ 1022 (1078)
....... ..+.+++.+||+.||++|||++|++++..
T Consensus 261 ~~~~~~~---~~l~~li~~cl~~dP~~RPs~~ei~~~Le 296 (307)
T 3omv_A 261 KLYKNCP---KAMKRLVADCVKKVKEERPLFPQILSSIE 296 (307)
T ss_dssp TSCTTSC---HHHHHHHHHHTCSSSTTSCCHHHHHHHHH
T ss_pred cccccch---HHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 2222222 35678899999999999999999998765
No 26
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=2.7e-49 Score=441.42 Aligned_cols=254 Identities=23% Similarity=0.398 Sum_probs=200.6
Q ss_pred cCCCccceeccCCceeEEEEEeC------CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCC
Q 039595 751 DDFDEKFCIGKGGQGSVYKAELP------SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNAR 824 (1078)
Q Consensus 751 ~~~~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 824 (1078)
++|.+.++||+|+||+||+|+++ +++.||||+++.. .....++|.+|+.++++++|||||+++|+|.+++
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~----~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~ 116 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA----SESARQDFQREAELLTMLQHQHIVRFFGVCTEGR 116 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC----SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC----CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC
Confidence 56778889999999999999764 4788999999753 3455678999999999999999999999999999
Q ss_pred eeEEEEeecCCCCHHHHhcCCCC------------CCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCC
Q 039595 825 HSFLVCEYLHRGSLARILGNDAT------------AKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDL 892 (1078)
Q Consensus 825 ~~~lv~E~~~~g~L~~~l~~~~~------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~ 892 (1078)
..|+|||||++|+|.++++.... ..++++.+++.|+.|||.||+|||++ +||||||||+|||++.
T Consensus 117 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~ 193 (329)
T 4aoj_A 117 PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQ 193 (329)
T ss_dssp SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEET
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECC
Confidence 99999999999999999965422 34699999999999999999999999 9999999999999999
Q ss_pred CCcEEEecccccccccCCCC--CceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccchhh
Q 039595 893 EFEAHVSDFGIAKFVEPYSS--NRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSINFSSFSN 969 (1078)
Q Consensus 893 ~~~~kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~~~~~~~ 969 (1078)
++.+||+|||+|+....... ......||+.|||||++.+..|+.++|||||||++|||+| |+.||..... .....
T Consensus 194 ~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~--~~~~~ 271 (329)
T 4aoj_A 194 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN--TEAID 271 (329)
T ss_dssp TTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH--HHHHH
T ss_pred CCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH--HHHHH
Confidence 99999999999987644322 2345679999999999999999999999999999999999 8999754322 11212
Q ss_pred hhhhhhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhh
Q 039595 970 MIIEVNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHI 1022 (1078)
Q Consensus 970 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~ 1022 (1078)
.+.. -..+..+ .... .++.+++.+||+.||++|||++|+++++-
T Consensus 272 ~i~~---g~~~~~p---~~~~---~~~~~li~~cl~~dP~~RPs~~ei~~~L~ 315 (329)
T 4aoj_A 272 CITQ---GRELERP---RACP---PEVYAIMRGCWQREPQQRHSIKDVHARLQ 315 (329)
T ss_dssp HHHH---TCCCCCC---TTCC---HHHHHHHHHHCCSSTTTSCCHHHHHHHHH
T ss_pred HHHc---CCCCCCc---cccc---HHHHHHHHHHcCcChhHCcCHHHHHHHHH
Confidence 1111 1111111 1222 25778899999999999999999987753
No 27
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.7e-49 Score=438.75 Aligned_cols=255 Identities=20% Similarity=0.317 Sum_probs=206.3
Q ss_pred cCCCccceeccCCceeEEEEEeC------CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCC
Q 039595 751 DDFDEKFCIGKGGQGSVYKAELP------SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNAR 824 (1078)
Q Consensus 751 ~~~~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 824 (1078)
.++++.++||+|+||+||+|.+. +++.||||+++... .....++|.+|+.++++++|||||+++|+|.+++
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~---~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~ 102 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA---EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQ 102 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C---CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc---ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECC
Confidence 45667889999999999999763 46789999997542 2344678999999999999999999999999999
Q ss_pred eeEEEEeecCCCCHHHHhcCCCC-------------CCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeC
Q 039595 825 HSFLVCEYLHRGSLARILGNDAT-------------AKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLD 891 (1078)
Q Consensus 825 ~~~lv~E~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~ 891 (1078)
..++|||||++|+|.+++..... ...+++.++++|+.|||.||+|||++ +||||||||+|||++
T Consensus 103 ~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~ 179 (308)
T 4gt4_A 103 PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVY 179 (308)
T ss_dssp SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEC
T ss_pred EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEEC
Confidence 99999999999999999954321 34689999999999999999999999 999999999999999
Q ss_pred CCCcEEEecccccccccCCC--CCceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccchh
Q 039595 892 LEFEAHVSDFGIAKFVEPYS--SNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSINFSSFS 968 (1078)
Q Consensus 892 ~~~~~kl~DfG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~~~~~~ 968 (1078)
+++.+||+|||+|+...... .......||+.|||||++.++.|+.++|||||||++|||+| |+.||..... ....
T Consensus 180 ~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~--~~~~ 257 (308)
T 4gt4_A 180 DKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN--QDVV 257 (308)
T ss_dssp GGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH--HHHH
T ss_pred CCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH--HHHH
Confidence 99999999999998764322 22345689999999999999999999999999999999998 8999754322 1222
Q ss_pred hhhhhhhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhh
Q 039595 969 NMIIEVNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHI 1022 (1078)
Q Consensus 969 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~ 1022 (1078)
..+ ......+.+.... ..+.+++.+||+.||++|||++||++++-
T Consensus 258 ~~i------~~~~~~~~p~~~~---~~~~~li~~C~~~dP~~RPs~~ei~~~L~ 302 (308)
T 4gt4_A 258 EMI------RNRQVLPCPDDCP---AWVYALMIECWNEFPSRRPRFKDIHSRLR 302 (308)
T ss_dssp HHH------HTTCCCCCCTTCC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHH------HcCCCCCCcccch---HHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 211 1111111122222 25778899999999999999999998753
No 28
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.3e-49 Score=437.76 Aligned_cols=251 Identities=23% Similarity=0.400 Sum_probs=203.2
Q ss_pred cCCCccceeccCCceeEEEEEeC------CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCC
Q 039595 751 DDFDEKFCIGKGGQGSVYKAELP------SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNAR 824 (1078)
Q Consensus 751 ~~~~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 824 (1078)
++|.+.+.||+|+||+||+|++. +++.||||+++.. .....++|.+|+.++++++|||||+++|+|.+++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~----~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~ 88 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA----SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD 88 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC----CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC----ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC
Confidence 57888899999999999999763 4778999999753 3445678999999999999999999999999999
Q ss_pred eeEEEEeecCCCCHHHHhcCCC----------CCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCC
Q 039595 825 HSFLVCEYLHRGSLARILGNDA----------TAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEF 894 (1078)
Q Consensus 825 ~~~lv~E~~~~g~L~~~l~~~~----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~ 894 (1078)
..|+|||||++|+|.++++... ....+++.+++.|+.|||.||+|||++ +|+||||||+|||++.++
T Consensus 89 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~ 165 (299)
T 4asz_A 89 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENL 165 (299)
T ss_dssp SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGG
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCC
Confidence 9999999999999999996432 345699999999999999999999999 999999999999999999
Q ss_pred cEEEecccccccccCCCCC--ceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccchhhhh
Q 039595 895 EAHVSDFGIAKFVEPYSSN--RTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSINFSSFSNMI 971 (1078)
Q Consensus 895 ~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~~~~~~~~~ 971 (1078)
.+||+|||+|+........ .....||+.|||||++.+..|+.++|||||||++|||+| |+.||..... .+....+
T Consensus 166 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~--~~~~~~i 243 (299)
T 4asz_A 166 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN--NEVIECI 243 (299)
T ss_dssp CEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH--HHHHHHH
T ss_pred cEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHH
Confidence 9999999999876443222 233569999999999999999999999999999999998 8999754322 1222221
Q ss_pred hhhhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHH
Q 039595 972 IEVNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFG 1019 (1078)
Q Consensus 972 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~ 1019 (1078)
.. ......+.... .++.+++.+||+.||++|||++|+..
T Consensus 244 ~~------~~~~~~p~~~~---~~~~~li~~cl~~dP~~RPs~~~i~~ 282 (299)
T 4asz_A 244 TQ------GRVLQRPRTCP---QEVYELMLGCWQREPHMRKNIKGIHT 282 (299)
T ss_dssp HH------TCCCCCCTTCC---HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred Hc------CCCCCCCccch---HHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 11 11111112222 25778899999999999999999854
No 29
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=7.4e-49 Score=477.06 Aligned_cols=492 Identities=22% Similarity=0.213 Sum_probs=356.4
Q ss_pred CCcccceEeeCCCCeEEEeccCccccCCcccCCccCCCCCCcEEeccCCcccccCCCCCCCCCCcceeccCCCccCCCCC
Q 039595 64 PCSWFGISCNHAGSRVISINLSTLCLNGTFQDFSFSSFPHLVNLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLSGVIS 143 (1078)
Q Consensus 64 ~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p 143 (1078)
.|.|.|| |+....+++. ++. .-.+.|++|+|++|.+++..|..|+++++|++|+|++|++++..|
T Consensus 3 ~C~~~~~-c~~~~~~l~~-----------ip~---~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~ 67 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTS-----------IPS---GLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEG 67 (549)
T ss_dssp EECTTSE-EECTTSCCSS-----------CCS---CCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECT
T ss_pred cCCCCce-EECCCCcccc-----------ccc---cCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccCh
Confidence 5999999 9865433322 222 123789999999999999889999999999999999999998888
Q ss_pred ccccCccceeEEEccCccCCCCCCcccccccccceeecccccccC-CccCcccCCCCCcEEEccCCCCCCCCC-Cccccc
Q 039595 144 PEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSG-RIPSSLGNLSKLALLYLNNNSLFGYIP-TVMGNL 221 (1078)
Q Consensus 144 ~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~-~~p~~l~~l~~L~~L~L~~n~l~~~~p-~~~~~l 221 (1078)
..|+++++|++|+|++|++++..|..++.+++|++|++++|.+++ .+|..++++++|++|++++|.+.+.+| ..|+++
T Consensus 68 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l 147 (549)
T 2z81_A 68 DAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGL 147 (549)
T ss_dssp TTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTC
T ss_pred hhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcc
Confidence 999999999999999999998777789999999999999999997 467899999999999999999555555 689999
Q ss_pred CCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCCCCcc-cCCCcccceeecccccccCcc--cc-ccccccCCc
Q 039595 222 KSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSI-IGNLKSLHQLDLIENQLSGSI--PL-SFGNLSSWT 297 (1078)
Q Consensus 222 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~--p~-~~~~l~~L~ 297 (1078)
++|++|++++|++++..|..++.+++|++|+++.|.+.. +|.. +..+++|++|++++|++++.. |. ....+++|+
T Consensus 148 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~ 226 (549)
T 2z81_A 148 TSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAF-LLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMK 226 (549)
T ss_dssp CEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTT-HHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCC
T ss_pred cccCeeeccCCcccccChhhhhccccCceEecccCcccc-cchhhHhhcccccEEEccCCccccccccccchhhhhhccc
Confidence 999999999999999999999999999999999999874 4544 467899999999999999753 22 234567788
Q ss_pred eeeecccCCCCCCC----ccccCCCccCeeeccccccCccC------CCCCCCCCcCcEEEccCccCCCCCCccccccCC
Q 039595 298 LMSLFSNSLSGSIP----PILGNLKSLSTLGLYLNQLNGVI------PPSIGNLSSLRNLSLFNNGLYGSIPEEIGYLKS 367 (1078)
Q Consensus 298 ~L~l~~n~l~~~~p----~~l~~l~~L~~L~L~~N~l~~~~------p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 367 (1078)
.|++++|.+++..+ ..+..+++|+.|++++|.+.+.. ...+..+.+|+.|++.++.+.... .+.
T Consensus 227 ~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~--~~~---- 300 (549)
T 2z81_A 227 KLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFY--LFY---- 300 (549)
T ss_dssp EEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGG--GSC----
T ss_pred ceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhh--hcc----
Confidence 88888887765433 33455667777777777765431 112333444555555444433110 000
Q ss_pred CCeEEcccccCccccCCCCccCCCCceeecccCcCCCCCCccc-cccCCCCeEEccCccccccch---hhccCCCCCcEe
Q 039595 368 LSELKLCKNNLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSL-KSLTSLKRVRFNQNNLVGKVY---EAFGDHPNLTFL 443 (1078)
Q Consensus 368 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l-~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L 443 (1078)
..+..+....+|+.|++++|++. .+|..+ ..+++|++|++++|.+.+..+ ..+..+++|++|
T Consensus 301 -------------~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L 366 (549)
T 2z81_A 301 -------------DLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTL 366 (549)
T ss_dssp -------------CCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEE
T ss_pred -------------cchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEE
Confidence 01111223456667777777665 344443 467777777777777766442 235667778888
Q ss_pred cCCCCccCCccCccccCCCCCceecccccccCCCCCccccCCCcccEEeccCCccCCCcccccccCccCcEEeccCCccC
Q 039595 444 DLSQNNFDGKISFNWRNLPKLDTFIVSMNNIFGSIPLEIGDSSKLQFLDLSSNHIVGKIPVQLEKLFSLNKLILSLNQLS 523 (1078)
Q Consensus 444 ~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~ 523 (1078)
++++|+++++... +..+..+++|++|++++|+|+ .+|..+..+++|++|++++|+++
T Consensus 367 ~Ls~N~l~~~~~~----------------------~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~ 423 (549)
T 2z81_A 367 VLSQNHLRSMQKT----------------------GEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR 423 (549)
T ss_dssp ECTTSCCCCHHHH----------------------HHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS
T ss_pred EccCCcccccccc----------------------hhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc
Confidence 8888877643210 012344555666666666665 34555566666666666666665
Q ss_pred CCcccccccccccceeeccCccccCCCCcccccccccccccccCcccccccchhhhcccccCeeecCCCccCCcCCCCcc
Q 039595 524 GSVPLEFGSLTELQYLDLSANKLSSSIPKSIGNLLKLYYLNLSNNQFSHTIPIEFEKLIHLSKLDLSHNILQEEIPPQVC 603 (1078)
Q Consensus 524 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 603 (1078)
. +|..+ .++|++|+|++|+|++.. ..+++|++|+|++|+|+ .+|. ...+++|+.|+|++|+|++.+|..+.
T Consensus 424 ~-l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~ 494 (549)
T 2z81_A 424 V-VKTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFD 494 (549)
T ss_dssp C-CCTTS--CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGG
T ss_pred c-ccchh--cCCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHh
Confidence 3 23222 146777777777777532 46678888888888887 4554 45688888899999988887777788
Q ss_pred cccccceeeccCccccCCcc
Q 039595 604 NMESLEKLNLSHNNLSGFIP 623 (1078)
Q Consensus 604 ~l~~L~~L~L~~N~l~~~~~ 623 (1078)
.+++|++|+|++|++++..|
T Consensus 495 ~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 495 RLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp GCTTCCEEECCSSCBCCCHH
T ss_pred cCcccCEEEecCCCccCCCc
Confidence 88899999999999887766
No 30
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.5e-47 Score=474.19 Aligned_cols=513 Identities=22% Similarity=0.228 Sum_probs=360.6
Q ss_pred CCCcEEeccCCcccccCCCCCCCCCCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeec
Q 039595 102 PHLVNLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSF 181 (1078)
Q Consensus 102 ~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l 181 (1078)
+.+++|||++|.|++..|..|+++++|++|||++|+|++..|.+|++|++|++|+|++|++++..|..|+.|++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 47899999999998877788999999999999999999777778999999999999999998655567889999999999
Q ss_pred ccccccCCccCcccCCCCCcEEEccCCCCCCC-CCCcccccCCCCeeecCCcccCCCCCCcccCCCCCc----EEecccc
Q 039595 182 CHNNVSGRIPSSLGNLSKLALLYLNNNSLFGY-IPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLD----TLFLYKN 256 (1078)
Q Consensus 182 ~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~----~L~L~~N 256 (1078)
++|++++..+..|+++++|++|+|++|.+++. +|..++++++|++|+|++|++++..|..|..+++++ .++++.|
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n 211 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 211 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccC
Confidence 99999877777899999999999999998763 577888899999999999999988888877666544 6788888
Q ss_pred ccCCCCCcccCCCcccceeecccccccCc-cccccccccCCceeeecccCCC------CCCCccccCCCccCeeeccccc
Q 039595 257 SLSGSIPSIIGNLKSLHQLDLIENQLSGS-IPLSFGNLSSWTLMSLFSNSLS------GSIPPILGNLKSLSTLGLYLNQ 329 (1078)
Q Consensus 257 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~l~~n~l~------~~~p~~l~~l~~L~~L~L~~N~ 329 (1078)
.++...+..+. ...++.|++++|..... .+..+..+..++...+..+... ......+..+..+..+.+..+.
T Consensus 212 ~l~~i~~~~~~-~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~ 290 (635)
T 4g8a_A 212 PMNFIQPGAFK-EIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 290 (635)
T ss_dssp CCCEECTTTTT-TCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEEC
T ss_pred cccccCccccc-chhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhh
Confidence 88855554444 45677888888866533 3345666666666555433322 2222333444444444444333
Q ss_pred cCc---cCCCCCCCCCcCcEEEccCccCCCCCCccccccCCCCeEEcccccCccccCCCCccCCCCceeecccCcCCCCC
Q 039595 330 LNG---VIPPSIGNLSSLRNLSLFNNGLYGSIPEEIGYLKSLSELKLCKNNLSGVIPHSVGNLTGLVLLNMCENHLFGPI 406 (1078)
Q Consensus 330 l~~---~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 406 (1078)
... ..+..+..+.+++.+++.+|.+... ..+....+|+.|++.+|.+.+..+. .+..|+.+++.+|.+.
T Consensus 291 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~~~~~~~~~~---~l~~L~~l~l~~n~~~--- 362 (635)
T 4g8a_A 291 LDYYLDGIIDLFNCLTNVSSFSLVSVTIERV--KDFSYNFGWQHLELVNCKFGQFPTL---KLKSLKRLTFTSNKGG--- 362 (635)
T ss_dssp CCSCEEECTTTTGGGTTCSEEEEESCEEEEC--GGGGSCCCCSEEEEESCEESSCCCC---BCTTCCEEEEESCCSC---
T ss_pred hcccccchhhhhhhhcccccccccccccccc--cccccchhhhhhhcccccccCcCcc---cchhhhhcccccccCC---
Confidence 221 1223344444555555555554422 1233444555555555555433221 2344444444444443
Q ss_pred CccccccCCCCeEEccCccccccchhhccCCCCCcEecCCCCccCCc--cCccccCCCCCceecccccccCCCCCccccC
Q 039595 407 PKSLKSLTSLKRVRFNQNNLVGKVYEAFGDHPNLTFLDLSQNNFDGK--ISFNWRNLPKLDTFIVSMNNIFGSIPLEIGD 484 (1078)
Q Consensus 407 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~--~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~ 484 (1078)
... .+..+++|+.|++++|.+... .+..+..+.+|+.+++..|.+.. .+..+..
T Consensus 363 ---------------------~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~ 418 (635)
T 4g8a_A 363 ---------------------NAF--SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLG 418 (635)
T ss_dssp ---------------------CBC--CCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTT
T ss_pred ---------------------CCc--ccccccccccchhhccccccccccccchhhhhhhhhhhcccccccc-ccccccc
Confidence 221 122345555555555555322 22333445555555555555543 3345666
Q ss_pred CCcccEEeccCCccCCCc-ccccccCccCcEEeccCCccCCCcccccccccccceeeccCccc-cCCCCccccccccccc
Q 039595 485 SSKLQFLDLSSNHIVGKI-PVQLEKLFSLNKLILSLNQLSGSVPLEFGSLTELQYLDLSANKL-SSSIPKSIGNLLKLYY 562 (1078)
Q Consensus 485 l~~L~~L~Ls~N~i~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l-~~~~~~~~~~l~~L~~ 562 (1078)
+++|+.+++++|.+.... +..|..+.+++.++++.|++.+..+..+..+++|+.|+|++|.+ .+..|..|..+++|++
T Consensus 419 l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~ 498 (635)
T 4g8a_A 419 LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 498 (635)
T ss_dssp CTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCE
T ss_pred cccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCE
Confidence 777888888877665443 34567788888888888888877788888888888888888874 3456778888888888
Q ss_pred ccccCcccccccchhhhcccccCeeecCCCccCCcCCCCcccccccceeeccCccccCCcccccccC-CcCcEEEcccCc
Q 039595 563 LNLSNNQFSHTIPIEFEKLIHLSKLDLSHNILQEEIPPQVCNMESLEKLNLSHNNLSGFIPRCFEKM-RSLSCIDICYNE 641 (1078)
Q Consensus 563 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l-~~L~~l~l~~N~ 641 (1078)
|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|++..|..|..+ ++|+.|++++|+
T Consensus 499 L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np 578 (635)
T 4g8a_A 499 LDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQND 578 (635)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCC
T ss_pred EECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCC
Confidence 8888888888888888888889999999998888777788888889999999999988888888887 579999999999
Q ss_pred CCCCCC
Q 039595 642 LQGPIP 647 (1078)
Q Consensus 642 l~~~~~ 647 (1078)
|++...
T Consensus 579 ~~C~C~ 584 (635)
T 4g8a_A 579 FACTCE 584 (635)
T ss_dssp BCCSGG
T ss_pred CcccCC
Confidence 988664
No 31
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.1e-48 Score=472.15 Aligned_cols=460 Identities=22% Similarity=0.197 Sum_probs=280.9
Q ss_pred ceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeecccccccCCccCcccCCCCCcEEEccCC
Q 039595 129 QNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLYLNNN 208 (1078)
Q Consensus 129 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n 208 (1078)
++||+++|+++ .+|..+. ++|++|+|++|.+++..|..|+.+++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 57888888888 5777666 78888888888888666677888888888888888887777777888888888888888
Q ss_pred CCCCCCCCcccccCCCCeeecCCcccCC-CCCCcccCCCCCcEEeccccccCCCCCcccCCCccc--ceeecccccc--c
Q 039595 209 SLFGYIPTVMGNLKSLSTLDLSQNQLNG-LIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSL--HQLDLIENQL--S 283 (1078)
Q Consensus 209 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L--~~L~Ls~N~l--~ 283 (1078)
+++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|+|++|++++ ..+..+++| +.|++++|.+ .
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 877 45554 67778888888887776 356777777777777777777764 345566666 7777777777 6
Q ss_pred Ccccccccccc-CCceeeecccCCCCCCCc-cccCCCccCeeeccccc-------cCccCCCCCCCCCcCcEEEccCccC
Q 039595 284 GSIPLSFGNLS-SWTLMSLFSNSLSGSIPP-ILGNLKSLSTLGLYLNQ-------LNGVIPPSIGNLSSLRNLSLFNNGL 354 (1078)
Q Consensus 284 ~~~p~~~~~l~-~L~~L~l~~n~l~~~~p~-~l~~l~~L~~L~L~~N~-------l~~~~p~~l~~l~~L~~L~Ls~N~l 354 (1078)
+..|..+..+. ....+++++|.+.+.++. .+.++++|+.|++++|. +.+.+| .++.+++|+.|++++|.+
T Consensus 154 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l 232 (520)
T 2z7x_B 154 KEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIET 232 (520)
T ss_dssp SCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEE
T ss_pred ccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhcccccccc
Confidence 66666665554 233445555555544432 34555555555555554 443333 445555555555555544
Q ss_pred CCCCCcccc---ccCCCCeEEcccccCccccCCCCccCCCCceeecccCcCCCCCCccccccCCCCeEEccCccccccch
Q 039595 355 YGSIPEEIG---YLKSLSELKLCKNNLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLKSLTSLKRVRFNQNNLVGKVY 431 (1078)
Q Consensus 355 ~~~~p~~~~---~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~ 431 (1078)
.+..+..+. ..++|++|++++|++++.+|..+... ....+++|+.+++++|.+ .++.
T Consensus 233 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~-------------------~~~~l~~L~~l~l~~n~~-~~p~ 292 (520)
T 2z7x_B 233 TWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDY-------------------SGTSLKALSIHQVVSDVF-GFPQ 292 (520)
T ss_dssp EHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCC-------------------CSCCCCEEEEEEEEECCC-CSCT
T ss_pred CHHHHHHHHHHhhhCcccEEEeecccccCccccchhhc-------------------ccccCceeEeccccccce-ecch
Confidence 432211111 12345555555555444444444000 004444444444444444 2221
Q ss_pred hhccCC---CCCcEecCCCCccCCccCccccCCCCCceecccccccCCCCCccccCCCcccEEeccCCccCCCccccccc
Q 039595 432 EAFGDH---PNLTFLDLSQNNFDGKISFNWRNLPKLDTFIVSMNNIFGSIPLEIGDSSKLQFLDLSSNHIVGKIPVQLEK 508 (1078)
Q Consensus 432 ~~~~~l---~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~ 508 (1078)
..+..+ .+|+.|++++|.+..... +..+++|++|++++|++++..|..+.+
T Consensus 293 ~~~~~~~~~~~L~~L~l~~n~l~~~~~--------------------------~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 346 (520)
T 2z7x_B 293 SYIYEIFSNMNIKNFTVSGTRMVHMLC--------------------------PSKISPFLHLDFSNNLLTDTVFENCGH 346 (520)
T ss_dssp HHHHHHHHTCCCSEEEEESSCCCCCCC--------------------------CSSCCCCCEEECCSSCCCTTTTTTCCC
T ss_pred hhhhcccccCceeEEEcCCCccccccc--------------------------hhhCCcccEEEeECCccChhhhhhhcc
Confidence 222211 346666666665542210 123455556666666665555555666
Q ss_pred CccCcEEeccCCccCC--CcccccccccccceeeccCccccCCCCc-ccccccccccccccCcccccccchhhhcccccC
Q 039595 509 LFSLNKLILSLNQLSG--SVPLEFGSLTELQYLDLSANKLSSSIPK-SIGNLLKLYYLNLSNNQFSHTIPIEFEKLIHLS 585 (1078)
Q Consensus 509 l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 585 (1078)
+++|++|+|++|++++ .+|..|..+++|++|+|++|.+++.+|. .+..+++|++|+|++|++++..|..+. ++|+
T Consensus 347 l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~ 424 (520)
T 2z7x_B 347 LTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIK 424 (520)
T ss_dssp CSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCC
T ss_pred CCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCC
Confidence 6666666666666654 3345566666666666666666653333 356666677777777777655555443 5777
Q ss_pred eeecCCCccCCcCCCCcccccccceeeccCccccCCcccccccCCcCcEEEcccCcCCCCCC
Q 039595 586 KLDLSHNILQEEIPPQVCNMESLEKLNLSHNNLSGFIPRCFEKMRSLSCIDICYNELQGPIP 647 (1078)
Q Consensus 586 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~l~l~~N~l~~~~~ 647 (1078)
.|+|++|+|+ .+|..+..+++|++|+|++|++++..+..|..+++|++|++++|++++.++
T Consensus 425 ~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 425 VLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp EEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred EEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCC
Confidence 7777777776 466666677777777777777775433447777777777788887777655
No 32
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=7.3e-49 Score=435.29 Aligned_cols=250 Identities=22% Similarity=0.274 Sum_probs=201.6
Q ss_pred hcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
.+.|+..++||+|+||+||+|++ .+|+.||||+++.... ..+|+.++++++|||||++++++.+++.+||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~---------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~i 127 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF---------RVEELVACAGLSSPRIVPLYGAVREGPWVNI 127 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC---------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh---------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 35688889999999999999965 4799999999975432 1368999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCC-cEEEecccccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEF-EAHVSDFGIAKFV 907 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~-~~kl~DfG~a~~~ 907 (1078)
|||||+||+|.+++++ .+.+++.++..++.||+.||+|||++ +||||||||+|||++.+| .+||+|||+|+.+
T Consensus 128 vmEy~~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~ 201 (336)
T 4g3f_A 128 FMELLEGGSLGQLIKQ---MGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCL 201 (336)
T ss_dssp EECCCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC
T ss_pred EEeccCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEc
Confidence 9999999999999953 35699999999999999999999999 999999999999999998 6999999999977
Q ss_pred cCCCCC-----ceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCC
Q 039595 908 EPYSSN-----RTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRL 982 (1078)
Q Consensus 908 ~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 982 (1078)
...... ....+||+.|||||++.+..|+.++||||+||++|||+||++||..... ......+... .+..
T Consensus 202 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~--~~~~~~i~~~----~~~~ 275 (336)
T 4g3f_A 202 QPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFR--GPLCLKIASE----PPPI 275 (336)
T ss_dssp ------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCC--SCCHHHHHHS----CCGG
T ss_pred cCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH--HHHHHHHHcC----CCCc
Confidence 543221 2335799999999999999999999999999999999999999754322 2222222111 1111
Q ss_pred CCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhh
Q 039595 983 STPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIG 1023 (1078)
Q Consensus 983 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~ 1023 (1078)
....+... ..+.+++.+||++||++|||++|+++|+..
T Consensus 276 ~~~~~~~s---~~~~~li~~~L~~dP~~R~sa~el~~~l~~ 313 (336)
T 4g3f_A 276 REIPPSCA---PLTAQAIQEGLRKEPVHRASAMELRRKVGK 313 (336)
T ss_dssp GGSCTTSC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred hhcCccCC---HHHHHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence 11111122 256788999999999999999999988653
No 33
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.7e-48 Score=468.65 Aligned_cols=454 Identities=20% Similarity=0.200 Sum_probs=362.9
Q ss_pred cEEeccCCcccccCCCCCCCCCCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeecccc
Q 039595 105 VNLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHN 184 (1078)
Q Consensus 105 ~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n 184 (1078)
++||+++|+++ .+|..+. ++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|+.+++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 57999999998 5888777 89999999999999888889999999999999999999888999999999999999999
Q ss_pred cccCCccCcccCCCCCcEEEccCCCCCC-CCCCcccccCCCCeeecCCcccCCCCCCcccCCCCC--cEEecccccc--C
Q 039595 185 NVSGRIPSSLGNLSKLALLYLNNNSLFG-YIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNL--DTLFLYKNSL--S 259 (1078)
Q Consensus 185 ~~~~~~p~~l~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L--~~L~L~~N~l--~ 259 (1078)
.++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|+|++|++++ ..+..+++| ++|++++|++ .
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 999 67877 89999999999999997 478999999999999999999986 457788888 9999999999 8
Q ss_pred CCCCcccCCCc-ccceeecccccccCcccc-ccccccCCceeeecccC-------CCCCCCccccCCCccCeeecccccc
Q 039595 260 GSIPSIIGNLK-SLHQLDLIENQLSGSIPL-SFGNLSSWTLMSLFSNS-------LSGSIPPILGNLKSLSTLGLYLNQL 330 (1078)
Q Consensus 260 ~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~l~~n~-------l~~~~p~~l~~l~~L~~L~L~~N~l 330 (1078)
+..|..+..+. +...+++++|.+.+.++. .+..+++|+.+++++|. +.+.+| .++.+++|+.|++++|.+
T Consensus 154 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l 232 (520)
T 2z7x_B 154 KEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIET 232 (520)
T ss_dssp SCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEE
T ss_pred ccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhcccccccc
Confidence 88898888876 455678899998876664 68899999999999998 777666 789999999999999998
Q ss_pred CccCCCCCC---CCCcCcEEEccCccCCCCCCccc-----cccCCCCeEEcccccCccccC-CCCccC---CCCceeecc
Q 039595 331 NGVIPPSIG---NLSSLRNLSLFNNGLYGSIPEEI-----GYLKSLSELKLCKNNLSGVIP-HSVGNL---TGLVLLNMC 398 (1078)
Q Consensus 331 ~~~~p~~l~---~l~~L~~L~Ls~N~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~~~p-~~~~~l---~~L~~L~L~ 398 (1078)
++..+..+. .+++|+.|++++|++.|.+|..+ +.+++|+.+++++|.+ .+| ..+..+ .+|+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~ 310 (520)
T 2z7x_B 233 TWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVS 310 (520)
T ss_dssp EHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEE
T ss_pred CHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcC
Confidence 754322111 13589999999999999999988 7777777777777777 233 333332 345555555
Q ss_pred cCcCCCCCCccccccCCCCeEEccCccccccchhhccCCCCCcEecCCCCccCCccCccccCCCCCceecccccccCCCC
Q 039595 399 ENHLFGPIPKSLKSLTSLKRVRFNQNNLVGKVYEAFGDHPNLTFLDLSQNNFDGKISFNWRNLPKLDTFIVSMNNIFGSI 478 (1078)
Q Consensus 399 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~ 478 (1078)
+|.+ ..... +..+++|++|++++|++++ ..
T Consensus 311 ~n~l------------------------~~~~~--~~~l~~L~~L~Ls~n~l~~------------------------~~ 340 (520)
T 2z7x_B 311 GTRM------------------------VHMLC--PSKISPFLHLDFSNNLLTD------------------------TV 340 (520)
T ss_dssp SSCC------------------------CCCCC--CSSCCCCCEEECCSSCCCT------------------------TT
T ss_pred CCcc------------------------ccccc--hhhCCcccEEEeECCccCh------------------------hh
Confidence 5554 33221 1455677777777776654 23
Q ss_pred CccccCCCcccEEeccCCccCC--CcccccccCccCcEEeccCCccCCCccc-ccccccccceeeccCccccCCCCcccc
Q 039595 479 PLEIGDSSKLQFLDLSSNHIVG--KIPVQLEKLFSLNKLILSLNQLSGSVPL-EFGSLTELQYLDLSANKLSSSIPKSIG 555 (1078)
Q Consensus 479 ~~~~~~l~~L~~L~Ls~N~i~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 555 (1078)
|..++.+++|++|++++|+|++ ..|..+..+++|++|++++|++++.+|. .|..+++|++|+|++|++++..|..+.
T Consensus 341 ~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~ 420 (520)
T 2z7x_B 341 FENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP 420 (520)
T ss_dssp TTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC
T ss_pred hhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc
Confidence 4455566667777777777765 3456677777888888888888764444 477788888888888888776666654
Q ss_pred cccccccccccCcccccccchhhhcccccCeeecCCCccCCcCCCCcccccccceeeccCccccCCcc
Q 039595 556 NLLKLYYLNLSNNQFSHTIPIEFEKLIHLSKLDLSHNILQEEIPPQVCNMESLEKLNLSHNNLSGFIP 623 (1078)
Q Consensus 556 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 623 (1078)
++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|+...+..+..+++|++|+|++|++++..+
T Consensus 421 --~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 421 --PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp --TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred --ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCC
Confidence 68899999999997 677777789999999999999985433348889999999999999987654
No 34
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=5.5e-48 Score=425.65 Aligned_cols=256 Identities=21% Similarity=0.341 Sum_probs=197.4
Q ss_pred cCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCC-----
Q 039595 751 DDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNAR----- 824 (1078)
Q Consensus 751 ~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 824 (1078)
.+|++.+.||+|+||+||+|+.+ +|+.||||+++... .....+.+.+|+.++++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~ 81 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN---RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKL 81 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS---SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-----
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccc
Confidence 46899999999999999999654 79999999996542 3445677999999999999999999999986433
Q ss_pred -------eeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEE
Q 039595 825 -------HSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAH 897 (1078)
Q Consensus 825 -------~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~k 897 (1078)
..|+|||||++|+|.+++.......+.++..++.++.||+.||+|||++ +|+||||||+|||++.+|.+|
T Consensus 82 ~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vK 158 (299)
T 4g31_A 82 QPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVK 158 (299)
T ss_dssp -----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEE
T ss_pred cccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEE
Confidence 4799999999999999997665556677788999999999999999999 999999999999999999999
Q ss_pred EecccccccccCCCC------------CceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccc
Q 039595 898 VSDFGIAKFVEPYSS------------NRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFS 965 (1078)
Q Consensus 898 l~DfG~a~~~~~~~~------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~ 965 (1078)
|+|||+|+....... .....+||+.|||||++.+..|+.++||||+||++|||++ ||.....
T Consensus 159 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~--- 232 (299)
T 4g31_A 159 VGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME--- 232 (299)
T ss_dssp ECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH---
T ss_pred EccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH---
Confidence 999999987654321 1234679999999999999999999999999999999996 6532111
Q ss_pred chhhhhhhhhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 966 SFSNMIIEVNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 966 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
.......+.....+ +..........+++.+||++||++|||++|+++|+|+..
T Consensus 233 ----~~~~~~~~~~~~~p---~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~ 285 (299)
T 4g31_A 233 ----RVRTLTDVRNLKFP---PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFED 285 (299)
T ss_dssp ----HHHHHHHHHTTCCC---HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCC
T ss_pred ----HHHHHHHHhcCCCC---CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCC
Confidence 11111111111111 112222335678999999999999999999999999764
No 35
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=5.7e-48 Score=434.04 Aligned_cols=265 Identities=23% Similarity=0.333 Sum_probs=211.1
Q ss_pred cHHHHHHhhcCCCccceeccCCceeEEEEEeC------CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCC-Ccee
Q 039595 742 MHEEIIKATDDFDEKFCIGKGGQGSVYKAELP------SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRH-RNIV 814 (1078)
Q Consensus 742 ~~~~~~~~~~~~~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv 814 (1078)
...+++...++|++.+.||+|+||+||+|.+. .++.||||++.... ...+.+.|.+|+.++++++| ||||
T Consensus 55 ~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~---~~~~~~~~~~E~~il~~l~hhpnIV 131 (353)
T 4ase_A 55 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHLNVV 131 (353)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred CCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc---ChHHHHHHHHHHHHHHHcCCCCcEE
Confidence 34556666789999999999999999999754 23579999997543 33456779999999999965 8999
Q ss_pred eEEeeeec-CCeeEEEEeecCCCCHHHHhcCCC-------------CCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEe
Q 039595 815 KFHGFCSN-ARHSFLVCEYLHRGSLARILGNDA-------------TAKELSWNRRINVIKGVANALSYLHHDCLPSIIH 880 (1078)
Q Consensus 815 ~l~~~~~~-~~~~~lv~E~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH 880 (1078)
+++|+|.+ +...++|||||++|+|.++++... ....+++.+++.++.|||.||+|||++ +|||
T Consensus 132 ~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiH 208 (353)
T 4ase_A 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIH 208 (353)
T ss_dssp CEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCC
T ss_pred EEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---Ceec
Confidence 99999865 467899999999999999996432 134589999999999999999999999 9999
Q ss_pred cCCCCCCeeeCCCCcEEEecccccccccCCCCC--ceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCC
Q 039595 881 RDISSKNVLLDLEFEAHVSDFGIAKFVEPYSSN--RTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPR 957 (1078)
Q Consensus 881 ~Dlk~~NIll~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~ 957 (1078)
|||||+|||+++++.+||+|||+|+........ .....||+.|||||++.+..|+.++|||||||++|||+| |+.||
T Consensus 209 RDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf 288 (353)
T 4ase_A 209 RDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 288 (353)
T ss_dssp SCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred CccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCC
Confidence 999999999999999999999999976543322 335679999999999999999999999999999999998 99997
Q ss_pred CcccccccchhhhhhhhhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhh
Q 039595 958 DFFSINFSSFSNMIIEVNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHI 1022 (1078)
Q Consensus 958 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~ 1022 (1078)
...... ..+...+ ..-..+..+ .... .++.+++.+||+.||++|||++|+++|.-
T Consensus 289 ~~~~~~-~~~~~~i---~~g~~~~~p---~~~~---~~~~~li~~c~~~dP~~RPt~~eil~~L~ 343 (353)
T 4ase_A 289 PGVKID-EEFCRRL---KEGTRMRAP---DYTT---PEMYQTMLDCWHGEPSQRPTFSELVEHLG 343 (353)
T ss_dssp TTCCCS-HHHHHHH---HHTCCCCCC---TTCC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCHH-HHHHHHH---HcCCCCCCC---ccCC---HHHHHHHHHHcCcChhHCcCHHHHHHHHH
Confidence 643322 1111111 111112221 1122 25778899999999999999999999853
No 36
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.1e-46 Score=417.61 Aligned_cols=262 Identities=23% Similarity=0.296 Sum_probs=196.8
Q ss_pred cCCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCC----ee
Q 039595 751 DDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNAR----HS 826 (1078)
Q Consensus 751 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~ 826 (1078)
++|.+.++||+|+||+||+|++ +|+.||||++.... .....+..|+..+.+++|||||++++++.+++ ..
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~-----~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~ 76 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE-----ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 76 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc-----hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEE
Confidence 4678889999999999999987 48999999986432 12223345676777899999999999997543 57
Q ss_pred EEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcC-----CCCcEecCCCCCCeeeCCCCcEEEecc
Q 039595 827 FLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDC-----LPSIIHRDISSKNVLLDLEFEAHVSDF 901 (1078)
Q Consensus 827 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-----~~~ivH~Dlk~~NIll~~~~~~kl~Df 901 (1078)
|+|||||++|+|.++++. ..++++++.+++.|++.||+|||+++ .++||||||||+|||++.++++||+||
T Consensus 77 ~lV~Ey~~~gsL~~~l~~----~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DF 152 (303)
T 3hmm_A 77 WLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EEEEECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCC
T ss_pred EEEecCCCCCcHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeC
Confidence 999999999999999943 45899999999999999999999752 348999999999999999999999999
Q ss_pred cccccccCCCCC----ceeeccccccccccccccC------CCCccchhHHHHHHHHHHHhCCCCCCcccccccchh---
Q 039595 902 GIAKFVEPYSSN----RTEFVGTFGYAAPEIAYTM------RATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFS--- 968 (1078)
Q Consensus 902 G~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~--- 968 (1078)
|+|+........ ....+||+.|||||++.+. .++.++|||||||++|||+||++||.........+.
T Consensus 153 Gla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~ 232 (303)
T 3hmm_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 232 (303)
T ss_dssp TTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTS
T ss_pred CCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcc
Confidence 999876543321 2346899999999998764 467899999999999999999888643322110000
Q ss_pred ----hhhhhhhhhcCCCCCCCCCc---cHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhh
Q 039595 969 ----NMIIEVNQILDPRLSTPSPG---VMDKLISIMEVAILCLDESPEARPTMEKGFGHHI 1022 (1078)
Q Consensus 969 ----~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~ 1022 (1078)
........+......+..+. ..+....+.+++.+||+.||++|||++|+++..-
T Consensus 233 ~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~ 293 (303)
T 3hmm_A 233 PSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 293 (303)
T ss_dssp CSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHH
T ss_pred cccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHH
Confidence 00011112222333222221 1234557889999999999999999999997643
No 37
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.1e-46 Score=424.51 Aligned_cols=264 Identities=23% Similarity=0.320 Sum_probs=206.0
Q ss_pred cCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeec------C
Q 039595 751 DDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSN------A 823 (1078)
Q Consensus 751 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~ 823 (1078)
++|++.+.||+|+||+||+|.. .+|+.||||+++... ......+.+.+|+.++++++|||||++++++.. .
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~--~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 131 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAF--DVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEF 131 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTT--SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccc--cchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccC
Confidence 6799999999999999999965 579999999997643 234456678899999999999999999998753 4
Q ss_pred CeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccc
Q 039595 824 RHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGI 903 (1078)
Q Consensus 824 ~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~ 903 (1078)
+.+|+|||||+ |+|.+++. ..+.+++.++..++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+
T Consensus 132 ~~~~ivmE~~~-g~L~~~i~---~~~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGl 204 (398)
T 4b99_A 132 KSVYVVLDLME-SDLHQIIH---SSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGM 204 (398)
T ss_dssp CCEEEEEECCS-EEHHHHHT---SSSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred CEEEEEEeCCC-CCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecce
Confidence 67899999996 58999994 346799999999999999999999999 999999999999999999999999999
Q ss_pred cccccCC----CCCceeeccccccccccccccC-CCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhh---
Q 039595 904 AKFVEPY----SSNRTEFVGTFGYAAPEIAYTM-RATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVN--- 975 (1078)
Q Consensus 904 a~~~~~~----~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~--- 975 (1078)
|+.+... .......+||+.|||||++.+. .++.++||||+||++|||++|++||...+. ......+....
T Consensus 205 a~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~--~~~l~~I~~~~g~p 282 (398)
T 4b99_A 205 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNY--VHQLQLIMMVLGTP 282 (398)
T ss_dssp CBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSH--HHHHHHHHHHHCCC
T ss_pred eeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCH--HHHHHHHHHhcCCC
Confidence 9876432 2234567899999999998875 569999999999999999999999753321 11111111100
Q ss_pred -----------------hhcCCCCCCCCCc-cHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 976 -----------------QILDPRLSTPSPG-VMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 976 -----------------~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
..+.+....+... ......++.+++.+||..||++|||++|+++|||+..
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~ 350 (398)
T 4b99_A 283 SPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAK 350 (398)
T ss_dssp CGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTT
T ss_pred ChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCc
Confidence 0011111100000 0001235789999999999999999999999999864
No 38
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=8.6e-46 Score=450.55 Aligned_cols=463 Identities=22% Similarity=0.204 Sum_probs=310.9
Q ss_pred CCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeecccccccCCccCcccCCCCCcEEEc
Q 039595 126 SKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLYL 205 (1078)
Q Consensus 126 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L 205 (1078)
...+++|+++|++++ +|..+. ++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 31 ~~~~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 107 (562)
T 3a79_B 31 ELESMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDV 107 (562)
T ss_dssp --CCEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEEC
Confidence 344899999999984 787665 78999999999999777788899999999999999998888888899999999999
Q ss_pred cCCCCCCCCCCcccccCCCCeeecCCcccCCC-CCCcccCCCCCcEEeccccccCCCCCcccCCCccc--ceeecccccc
Q 039595 206 NNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGL-IPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSL--HQLDLIENQL 282 (1078)
Q Consensus 206 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L--~~L~Ls~N~l 282 (1078)
++|+++ .+|.. .+++|++|+|++|++++. +|..|+++++|++|+|++|++++. .+..+++| +.|++++|++
T Consensus 108 s~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l 181 (562)
T 3a79_B 108 SHNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSY 181 (562)
T ss_dssp TTSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSC
T ss_pred CCCcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccc
Confidence 999987 56655 788899999999988874 467888888899999998888853 34445555 8888888888
Q ss_pred --cCcccccccccc-CCceeeecccCCCCCCCc-cccCCCccCeeeccccc-----cCccCCCCCCCCCcCcEEEccCcc
Q 039595 283 --SGSIPLSFGNLS-SWTLMSLFSNSLSGSIPP-ILGNLKSLSTLGLYLNQ-----LNGVIPPSIGNLSSLRNLSLFNNG 353 (1078)
Q Consensus 283 --~~~~p~~~~~l~-~L~~L~l~~n~l~~~~p~-~l~~l~~L~~L~L~~N~-----l~~~~p~~l~~l~~L~~L~Ls~N~ 353 (1078)
++..|..|..+. ....+++++|.+.+.++. .+.++++|+.|++++|+ +.+. +..+..+++|+.|+++++.
T Consensus 182 ~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~-~~~l~~l~~L~~L~L~~~~ 260 (562)
T 3a79_B 182 HIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTF-LSELTRGPTLLNVTLQHIE 260 (562)
T ss_dssp CCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHH-HHHHHSCSSCEEEEEEEEE
T ss_pred cccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHH-HHHHhccCcceEEEecCCc
Confidence 777777777654 122456677776665543 34556666666666664 1111 1123444555555555554
Q ss_pred CCCCC----CccccccCCCCeEEcccccCccccCCCCccCCCCceeecccCcCCCCCCccccccCCCCeEEccCcccccc
Q 039595 354 LYGSI----PEEIGYLKSLSELKLCKNNLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLKSLTSLKRVRFNQNNLVGK 429 (1078)
Q Consensus 354 l~~~~----p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 429 (1078)
+.+.. +..+ ...+|++|++++|++++.+|..+... ....++.|+.+++..|.+ .+
T Consensus 261 l~~~~~~~~~~~~-~~~~L~~L~l~~n~l~~~ip~~~~~~-------------------~~~~L~~L~~~~~~~~~~-~~ 319 (562)
T 3a79_B 261 TTWKCSVKLFQFF-WPRPVEYLNIYNLTITERIDREEFTY-------------------SETALKSLMIEHVKNQVF-LF 319 (562)
T ss_dssp ECHHHHHHHHHHH-TTSSEEEEEEEEEEECSCCCCCCCCC-------------------CSCSCCEEEEEEEEECCC-SS
T ss_pred CcHHHHHHHHHhh-hcccccEEEEeccEeeccccchhhhc-------------------ccccchheehhhccccee-ec
Confidence 43211 1111 11244555555555544444433000 003333333333333333 12
Q ss_pred chhhcc---CCCCCcEecCCCCccCCccCccccCCCCCceecccccccCCCCCccccCCCcccEEeccCCccCCCccccc
Q 039595 430 VYEAFG---DHPNLTFLDLSQNNFDGKISFNWRNLPKLDTFIVSMNNIFGSIPLEIGDSSKLQFLDLSSNHIVGKIPVQL 506 (1078)
Q Consensus 430 ~~~~~~---~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~ 506 (1078)
+...+. ...+|+.|++++|.+.... ....+++|++|++++|++++..|..+
T Consensus 320 p~~~~~~~~~~~~L~~L~l~~n~~~~~~--------------------------~~~~l~~L~~L~l~~n~l~~~~~~~~ 373 (562)
T 3a79_B 320 SKEALYSVFAEMNIKMLSISDTPFIHMV--------------------------CPPSPSSFTFLNFTQNVFTDSVFQGC 373 (562)
T ss_dssp CHHHHHHHHHTCCCSEEEEESSCCCCCC--------------------------CCSSCCCCCEEECCSSCCCTTTTTTC
T ss_pred ChhhhhhhhccCcceEEEccCCCccccc--------------------------CccCCCCceEEECCCCccccchhhhh
Confidence 111111 1145666666666554211 01355667777777777777677777
Q ss_pred ccCccCcEEeccCCccCCC--cccccccccccceeeccCccccCCCC-cccccccccccccccCcccccccchhhhcccc
Q 039595 507 EKLFSLNKLILSLNQLSGS--VPLEFGSLTELQYLDLSANKLSSSIP-KSIGNLLKLYYLNLSNNQFSHTIPIEFEKLIH 583 (1078)
Q Consensus 507 ~~l~~L~~L~Ls~N~l~~~--~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 583 (1078)
.++++|+.|+|++|++++. +|..|..+++|++|+|++|.+++.+| ..+..+++|++|+|++|++++..|..+. ++
T Consensus 374 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~ 451 (562)
T 3a79_B 374 STLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PK 451 (562)
T ss_dssp CSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TT
T ss_pred cccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--Cc
Confidence 7777777777777777753 34567778888888888888876333 4577778888888888888766655543 68
Q ss_pred cCeeecCCCccCCcCCCCcccccccceeeccCccccCCcccccccCCcCcEEEcccCcCCCCCCC
Q 039595 584 LSKLDLSHNILQEEIPPQVCNMESLEKLNLSHNNLSGFIPRCFEKMRSLSCIDICYNELQGPIPN 648 (1078)
Q Consensus 584 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~l~l~~N~l~~~~~~ 648 (1078)
|+.|+|++|+|+ .+|..+..+++|++|+|++|++++..+..|..+++|+.|++++|+|+|.+|.
T Consensus 452 L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 515 (562)
T 3a79_B 452 VKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG 515 (562)
T ss_dssp CSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHHH
T ss_pred CCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcch
Confidence 888888888887 4666666888888888888888855444488888899999999998887764
No 39
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=9.4e-45 Score=449.18 Aligned_cols=516 Identities=22% Similarity=0.216 Sum_probs=392.6
Q ss_pred cCCCCCCCCCCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeecccccccCCccCcccC
Q 039595 117 NIPPQIGNLSKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGN 196 (1078)
Q Consensus 117 ~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~ 196 (1078)
.+|+.+. +.+++|||++|+|++..|.+|+++++|++|+|++|+|++..|.+|+.|++|++|+|++|++++..|..|++
T Consensus 45 ~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~ 122 (635)
T 4g8a_A 45 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG 122 (635)
T ss_dssp SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTT
T ss_pred ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcC
Confidence 4676553 57999999999999777788999999999999999999666678899999999999999998776778899
Q ss_pred CCCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcccCCC-CCCcccCCCCCcEEeccccccCCCCCcccCCCcccc--
Q 039595 197 LSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGL-IPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLH-- 273 (1078)
Q Consensus 197 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~-- 273 (1078)
+++|++|+|++|++++..+..|+++++|++|+|++|++++. .|..++.+++|++|+|++|++++..|..|..+.+++
T Consensus 123 L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~ 202 (635)
T 4g8a_A 123 LSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLL 202 (635)
T ss_dssp CTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTC
T ss_pred CCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhh
Confidence 99999999999999887777889999999999999998764 577788889999999999999887777777666544
Q ss_pred --eeecccccccCccccccccccCCceeeecccCCCCC-CCccccCCCccCeeeccccccC------ccCCCCCCCCCcC
Q 039595 274 --QLDLIENQLSGSIPLSFGNLSSWTLMSLFSNSLSGS-IPPILGNLKSLSTLGLYLNQLN------GVIPPSIGNLSSL 344 (1078)
Q Consensus 274 --~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~-~p~~l~~l~~L~~L~L~~N~l~------~~~p~~l~~l~~L 344 (1078)
.++++.|.++...+..+.. ..+..+++.+|..... .+..+..+..++...+..+... ......+..+..+
T Consensus 203 ~~~~~ls~n~l~~i~~~~~~~-~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l 281 (635)
T 4g8a_A 203 NLSLDLSLNPMNFIQPGAFKE-IRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNL 281 (635)
T ss_dssp CCEEECTTCCCCEECTTTTTT-CEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGS
T ss_pred hhhhhcccCcccccCcccccc-hhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccch
Confidence 5778888887665555443 3456677777765432 2344666666666665544332 2222333444444
Q ss_pred cEEEccCccCCCCCCccccccCCCCeEEcccccCccccCCCCccCCCCceeecccCcCCCCCCccccccCCCCeEEccCc
Q 039595 345 RNLSLFNNGLYGSIPEEIGYLKSLSELKLCKNNLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLKSLTSLKRVRFNQN 424 (1078)
Q Consensus 345 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N 424 (1078)
..+++..+...... ...+..+..+.+++.+.+.+|.+... ..+.....++.|++.+|
T Consensus 282 ~~~~l~~~~~~~~~---------------------~~~~~~~~~~~~l~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~~ 338 (635)
T 4g8a_A 282 TIEEFRLAYLDYYL---------------------DGIIDLFNCLTNVSSFSLVSVTIERV--KDFSYNFGWQHLELVNC 338 (635)
T ss_dssp EEEEEEEECCCSCE---------------------EECTTTTGGGTTCSEEEEESCEEEEC--GGGGSCCCCSEEEEESC
T ss_pred hhhhhhhhhhcccc---------------------cchhhhhhhhcccccccccccccccc--cccccchhhhhhhcccc
Confidence 44444433322111 11222333444455555555444322 12334455666666666
Q ss_pred cccccchhhccCCCCCcEecCCCCccCCccCccccCCCCCceecccccccCC--CCCccccCCCcccEEeccCCccCCCc
Q 039595 425 NLVGKVYEAFGDHPNLTFLDLSQNNFDGKISFNWRNLPKLDTFIVSMNNIFG--SIPLEIGDSSKLQFLDLSSNHIVGKI 502 (1078)
Q Consensus 425 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~--~~~~~~~~l~~L~~L~Ls~N~i~~~~ 502 (1078)
.+..+... .++.|+.++++.|.+... ..+..+++|+.++++.|.+.. ..+..+..+.+|+.++++.|.+. ..
T Consensus 339 ~~~~~~~~---~l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~-~~ 412 (635)
T 4g8a_A 339 KFGQFPTL---KLKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVI-TM 412 (635)
T ss_dssp EESSCCCC---BCTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEE-EE
T ss_pred cccCcCcc---cchhhhhcccccccCCCC--cccccccccccchhhccccccccccccchhhhhhhhhhhccccccc-cc
Confidence 65554433 346788888888887654 345678999999999999864 35566778899999999999987 45
Q ss_pred ccccccCccCcEEeccCCccCCCc-ccccccccccceeeccCccccCCCCcccccccccccccccCccc-ccccchhhhc
Q 039595 503 PVQLEKLFSLNKLILSLNQLSGSV-PLEFGSLTELQYLDLSANKLSSSIPKSIGNLLKLYYLNLSNNQF-SHTIPIEFEK 580 (1078)
Q Consensus 503 ~~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l-~~~~~~~~~~ 580 (1078)
+..+..+++|+.++++.|+..... +..|..+++++.++++.|.+.+..+..+..+++|++|+|++|++ .+..|..|..
T Consensus 413 ~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~ 492 (635)
T 4g8a_A 413 SSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTE 492 (635)
T ss_dssp CSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTT
T ss_pred cccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhh
Confidence 667889999999999999877554 45788999999999999999999999999999999999999985 4467889999
Q ss_pred ccccCeeecCCCccCCcCCCCcccccccceeeccCccccCCcccccccCCcCcEEEcccCcCCCCCCCCcc-c----cCc
Q 039595 581 LIHLSKLDLSHNILQEEIPPQVCNMESLEKLNLSHNNLSGFIPRCFEKMRSLSCIDICYNELQGPIPNSTV-F----KDG 655 (1078)
Q Consensus 581 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~l~l~~N~l~~~~~~~~~-~----~~~ 655 (1078)
+++|+.|||++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+.||+++|++++.+|..-. + ..-
T Consensus 493 l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L 572 (635)
T 4g8a_A 493 LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFL 572 (635)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEE
T ss_pred ccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEE
Confidence 99999999999999998899999999999999999999999999999999999999999999998876432 2 223
Q ss_pred cccCCCCcC
Q 039595 656 LMEGNKGLC 664 (1078)
Q Consensus 656 ~~~~n~~lc 664 (1078)
..++||+.|
T Consensus 573 ~L~~Np~~C 581 (635)
T 4g8a_A 573 NLTQNDFAC 581 (635)
T ss_dssp ECTTCCBCC
T ss_pred EeeCCCCcc
Confidence 578999988
No 40
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.2e-45 Score=418.28 Aligned_cols=264 Identities=22% Similarity=0.295 Sum_probs=202.2
Q ss_pred HHHhhcCCCccceeccCCceeEEEEEeC----CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcC-CCCceeeEEeee
Q 039595 746 IIKATDDFDEKFCIGKGGQGSVYKAELP----SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEI-RHRNIVKFHGFC 820 (1078)
Q Consensus 746 ~~~~~~~~~~~~~lG~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~ 820 (1078)
+....++|++.+.||+|+||+||+|+.+ +++.||||++.... ...++.+|+.+++.+ +|||||++++++
T Consensus 16 ~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~------~~~~~~~E~~~l~~~~~h~nIv~l~~~~ 89 (361)
T 4f9c_A 16 VPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS------HPIRIAAELQCLTVAGGQDNVMGVKYCF 89 (361)
T ss_dssp SGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS------CHHHHHHHHHHHHHTCSBTTBCCCSEEE
T ss_pred cCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc------CHHHHHHHHHHHHHhcCCCCCceEEEEE
Confidence 3345678999999999999999999643 46789999986532 245678899999988 699999999999
Q ss_pred ecCCeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCC-CcEEEe
Q 039595 821 SNARHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLE-FEAHVS 899 (1078)
Q Consensus 821 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~-~~~kl~ 899 (1078)
.+.+..|+||||+++|+|.++++ .+++.++..++.||+.||+|||++ ||+||||||+|||++.+ +.+||+
T Consensus 90 ~~~~~~~lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~ 160 (361)
T 4f9c_A 90 RKNDHVVIAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALV 160 (361)
T ss_dssp EETTEEEEEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEEC
T ss_pred EECCEEEEEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEEC
Confidence 99999999999999999999982 488999999999999999999999 99999999999999877 899999
Q ss_pred cccccccccCCCC----------------------------CceeeccccccccccccccC-CCCccchhHHHHHHHHHH
Q 039595 900 DFGIAKFVEPYSS----------------------------NRTEFVGTFGYAAPEIAYTM-RATEKYDVYSFGVLVFEV 950 (1078)
Q Consensus 900 DfG~a~~~~~~~~----------------------------~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~el 950 (1078)
|||+|+....... .....+||+.|||||++.+. .|+.++||||+||++|||
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~el 240 (361)
T 4f9c_A 161 DFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSL 240 (361)
T ss_dssp CCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHH
T ss_pred cCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHH
Confidence 9999986543211 12345799999999999875 589999999999999999
Q ss_pred HhCCCCCCcccccccchhhhhhh-------------------------------hhhh--c---CCCCCCC-------CC
Q 039595 951 IKGNHPRDFFSINFSSFSNMIIE-------------------------------VNQI--L---DPRLSTP-------SP 987 (1078)
Q Consensus 951 ltG~~p~~~~~~~~~~~~~~~~~-------------------------------~~~~--~---~~~~~~~-------~~ 987 (1078)
++|+.||.....+.......... .... . .|..... ..
T Consensus 241 l~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 320 (361)
T 4f9c_A 241 LSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLE 320 (361)
T ss_dssp HHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC---------------------
T ss_pred HHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhcccccccccccccccccccccc
Confidence 99999974332221111110000 0000 0 0000000 00
Q ss_pred ccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhh
Q 039595 988 GVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGY 1024 (1078)
Q Consensus 988 ~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~ 1024 (1078)
.......++.+++.+||..||++|||++|+++|||+.
T Consensus 321 ~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~ 357 (361)
T 4f9c_A 321 GWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFK 357 (361)
T ss_dssp -CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGT
T ss_pred ccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccC
Confidence 0011123578999999999999999999999999975
No 41
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=9.2e-45 Score=441.51 Aligned_cols=457 Identities=21% Similarity=0.214 Sum_probs=343.5
Q ss_pred CcEEeccCCcccccCCCCCCCCCCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeeccc
Q 039595 104 LVNLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCH 183 (1078)
Q Consensus 104 L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~ 183 (1078)
.+++|+++|++++ +|..+. ++|++|+|++|++++..|.+|+++++|++|+|++|++++..|..|+.+++|++|+|++
T Consensus 33 ~~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 109 (562)
T 3a79_B 33 ESMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSH 109 (562)
T ss_dssp CCEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTT
T ss_pred CcEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCC
Confidence 3899999999985 787665 8999999999999988888999999999999999999988899999999999999999
Q ss_pred ccccCCccCcccCCCCCcEEEccCCCCCCC-CCCcccccCCCCeeecCCcccCCCCCCcccCCCCC--cEEecccccc--
Q 039595 184 NNVSGRIPSSLGNLSKLALLYLNNNSLFGY-IPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNL--DTLFLYKNSL-- 258 (1078)
Q Consensus 184 n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L--~~L~L~~N~l-- 258 (1078)
|.++ .+|.. .+++|++|+|++|++++. +|..|+++++|++|+|++|++++. .+..+++| ++|+|++|++
T Consensus 110 N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~ 183 (562)
T 3a79_B 110 NRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHI 183 (562)
T ss_dssp SCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCC
T ss_pred CcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccc
Confidence 9998 67877 899999999999999873 568999999999999999999864 45666666 9999999999
Q ss_pred CCCCCcccCCCc-ccceeecccccccCcccc-ccccccCCceeeecccC-----CCCCCCccccCCCccCeeeccccccC
Q 039595 259 SGSIPSIIGNLK-SLHQLDLIENQLSGSIPL-SFGNLSSWTLMSLFSNS-----LSGSIPPILGNLKSLSTLGLYLNQLN 331 (1078)
Q Consensus 259 ~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~l~~n~-----l~~~~p~~l~~l~~L~~L~L~~N~l~ 331 (1078)
++..|..+..+. ..-.+++++|.+.+.++. .+..+++|+.+++++|. +.+ ....+..+++|+.|++.++.+.
T Consensus 184 ~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~-~~~~l~~l~~L~~L~L~~~~l~ 262 (562)
T 3a79_B 184 KGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMT-FLSELTRGPTLLNVTLQHIETT 262 (562)
T ss_dssp CSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHH-HHHHHHSCSSCEEEEEEEEEEC
T ss_pred cccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHH-HHHHHhccCcceEEEecCCcCc
Confidence 888888888765 222668899999886664 57789999999999996 222 2345788899999999988876
Q ss_pred ccC----CCCCCCCCcCcEEEccCccCCCCCCccc-----cccCCCCeEEcccccCccccC-CCCccCCCCceeecccCc
Q 039595 332 GVI----PPSIGNLSSLRNLSLFNNGLYGSIPEEI-----GYLKSLSELKLCKNNLSGVIP-HSVGNLTGLVLLNMCENH 401 (1078)
Q Consensus 332 ~~~----p~~l~~l~~L~~L~Ls~N~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~ 401 (1078)
+.. +..+ ..++|++|++++|.+.|.+|..+ ..+++|+.++++.|.+ .+| ..+..+
T Consensus 263 ~~~~~~~~~~~-~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~------------ 327 (562)
T 3a79_B 263 WKCSVKLFQFF-WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSV------------ 327 (562)
T ss_dssp HHHHHHHHHHH-TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHH------------
T ss_pred HHHHHHHHHhh-hcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhh------------
Confidence 431 1111 23489999999999999999887 5555555555555555 222 111111
Q ss_pred CCCCCCccccccCCCCeEEccCccccccchhhccCCCCCcEecCCCCccCCccCccccCCCCCceecccccccCCCCCcc
Q 039595 402 LFGPIPKSLKSLTSLKRVRFNQNNLVGKVYEAFGDHPNLTFLDLSQNNFDGKISFNWRNLPKLDTFIVSMNNIFGSIPLE 481 (1078)
Q Consensus 402 l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~ 481 (1078)
....+|++|++++|.+..... +..+++|++|++++|++++ ..|..
T Consensus 328 ---------~~~~~L~~L~l~~n~~~~~~~--~~~l~~L~~L~l~~n~l~~------------------------~~~~~ 372 (562)
T 3a79_B 328 ---------FAEMNIKMLSISDTPFIHMVC--PPSPSSFTFLNFTQNVFTD------------------------SVFQG 372 (562)
T ss_dssp ---------HHTCCCSEEEEESSCCCCCCC--CSSCCCCCEEECCSSCCCT------------------------TTTTT
T ss_pred ---------hccCcceEEEccCCCcccccC--ccCCCCceEEECCCCcccc------------------------chhhh
Confidence 011334445555554433221 1455667777777776654 33445
Q ss_pred ccCCCcccEEeccCCccCCC--cccccccCccCcEEeccCCccCCCc-ccccccccccceeeccCccccCCCCccccccc
Q 039595 482 IGDSSKLQFLDLSSNHIVGK--IPVQLEKLFSLNKLILSLNQLSGSV-PLEFGSLTELQYLDLSANKLSSSIPKSIGNLL 558 (1078)
Q Consensus 482 ~~~l~~L~~L~Ls~N~i~~~--~~~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 558 (1078)
++.+++|++|+|++|+|++. .|..+.++++|+.|+|++|++++.+ +..|..+++|++|+|++|++++..|..+. +
T Consensus 373 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~ 450 (562)
T 3a79_B 373 CSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--P 450 (562)
T ss_dssp CCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--T
T ss_pred hcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--C
Confidence 55566666677777766653 2455677777777777777777633 34577778888888888888766665554 5
Q ss_pred ccccccccCcccccccchhhhcccccCeeecCCCccCCcCCCCcccccccceeeccCccccCCcc
Q 039595 559 KLYYLNLSNNQFSHTIPIEFEKLIHLSKLDLSHNILQEEIPPQVCNMESLEKLNLSHNNLSGFIP 623 (1078)
Q Consensus 559 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 623 (1078)
+|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..+..+++|+.|+|++|++++..+
T Consensus 451 ~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 451 KVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp TCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred cCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 7888888888887 566666688888999999998885333348888899999999999887654
No 42
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=7.6e-45 Score=431.57 Aligned_cols=260 Identities=18% Similarity=0.203 Sum_probs=207.4
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCC--hhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCee
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGN--MADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHS 826 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 826 (1078)
.++|++.+.||+|+||+||+|+.+ +|+.||||++.+...... .........++.+++.++|||||+++++|.+.+.+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 478999999999999999999654 799999999976433211 11122233456777888999999999999999999
Q ss_pred EEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccc
Q 039595 827 FLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKF 906 (1078)
Q Consensus 827 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~ 906 (1078)
|+||||++||+|.+++.+ .+.+++.++..++.||+.||+|||++ |||||||||+|||++.+|.+||+|||+|+.
T Consensus 268 ylVmEy~~GGdL~~~l~~---~~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~ 341 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQ---HGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACD 341 (689)
T ss_dssp EEEECCCCSCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeee
Confidence 999999999999999943 45699999999999999999999999 999999999999999999999999999987
Q ss_pred ccCCCCCceeecccccccccccccc-CCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCC
Q 039595 907 VEPYSSNRTEFVGTFGYAAPEIAYT-MRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTP 985 (1078)
Q Consensus 907 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 985 (1078)
+... .....+||+.|||||++.+ ..|+.++||||+||++|||++|++||...... ..... ..........++.
T Consensus 342 ~~~~--~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~--~~~~i-~~~i~~~~~~~p~- 415 (689)
T 3v5w_A 342 FSKK--KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK--DKHEI-DRMTLTMAVELPD- 415 (689)
T ss_dssp CSSC--CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCC--CHHHH-HHHHHHCCCCCCT-
T ss_pred cCCC--CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHH-HHhhcCCCCCCCc-
Confidence 6542 3345789999999999974 57999999999999999999999997543221 11111 1111111122221
Q ss_pred CCccHHHHHHHHHHHHhcccCCCCCCCC-----hhHHHHHhhhhhh
Q 039595 986 SPGVMDKLISIMEVAILCLDESPEARPT-----MEKGFGHHIGYCD 1026 (1078)
Q Consensus 986 ~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~ell~h~~~~~~ 1026 (1078)
... .++.+++.+||.+||.+|++ ++|+++|||+..-
T Consensus 416 --~~S---~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~i 456 (689)
T 3v5w_A 416 --SFS---PELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL 456 (689)
T ss_dssp --TSC---HHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTC
T ss_pred --cCC---HHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCC
Confidence 111 25778999999999999998 7999999998753
No 43
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.9e-44 Score=433.45 Aligned_cols=258 Identities=19% Similarity=0.288 Sum_probs=213.1
Q ss_pred hcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
.++|++.+.||+|+||+||+|.. .+|+.||+|++... ...+.+.+.+|+.+|+.++|||||+++++|.++..+|+
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~----~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~i 231 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP----HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVM 231 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC----SHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEecc----chhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEE
Confidence 46899999999999999999965 47999999998754 34456778999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCC--CcEEEeccccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLE--FEAHVSDFGIAKF 906 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~--~~~kl~DfG~a~~ 906 (1078)
|||||+||+|.+++... ...+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.
T Consensus 232 v~E~~~gg~L~~~i~~~--~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~ 306 (573)
T 3uto_A 232 IYEFMSGGELFEKVADE--HNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAH 306 (573)
T ss_dssp EEECCCCCBHHHHHTCT--TSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEE
T ss_pred EEeecCCCcHHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeE
Confidence 99999999999999432 34689999999999999999999999 99999999999999865 8999999999998
Q ss_pred ccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCC
Q 039595 907 VEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPS 986 (1078)
Q Consensus 907 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 986 (1078)
+... ......+||+.|||||++.+..|+.++||||+||++|||++|+.||..... ......+. ......+.
T Consensus 307 ~~~~-~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~--~~~~~~i~------~~~~~~~~ 377 (573)
T 3uto_A 307 LDPK-QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND--DETLRNVK------SCDWNMDD 377 (573)
T ss_dssp CCTT-SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHHHH------TTCCCCCS
T ss_pred ccCC-CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHHHHH------hCCCCCCc
Confidence 7543 334567899999999999999999999999999999999999999753322 11111111 11111111
Q ss_pred CccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 987 PGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 987 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
........++.+++.+||..||++|||++|+++|+|+..
T Consensus 378 ~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~ 416 (573)
T 3uto_A 378 SAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTP 416 (573)
T ss_dssp GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSC
T ss_pred ccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCcCC
Confidence 111112235778999999999999999999999999763
No 44
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=7.2e-44 Score=399.14 Aligned_cols=298 Identities=33% Similarity=0.534 Sum_probs=188.9
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCCccccCCCCCCCCCCCCCCCCc--ccceEeeCCC--CeEEEeccCccccCCcccCCcc
Q 039595 23 SDSSAEACALLNWKTSLQNQNLNSSLLSSWTLYPTNASKISPCS--WFGISCNHAG--SRVISINLSTLCLNGTFQDFSF 98 (1078)
Q Consensus 23 ~~~~~~~~all~~k~~~~~~~~~~~~l~sW~~~~~~~~~~~~c~--w~gv~C~~~~--~~v~~l~l~~~~l~g~~~~~~~ 98 (1078)
.|.++|++||++||+++.++ ..+++|+. ++|||. |.||+|+..+ ++|+.++|+++.+.|..
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~----~~l~~W~~------~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~----- 66 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNP----TTLSSWLP------TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPY----- 66 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCC----GGGTTCCT------TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCE-----
T ss_pred CCCHHHHHHHHHHHHhcCCc----ccccCCCC------CCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCc-----
Confidence 58899999999999999643 36899972 468998 9999998654 56766655554444410
Q ss_pred CCCCCCcEEeccCCcccccCCCCCCCCCCcceeccCC-CccCCCCCccccCccceeEEEccCccCCCCCCcccccccccc
Q 039595 99 SSFPHLVNLNLSFNLFFGNIPPQIGNLSKLQNLDLGN-NQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIH 177 (1078)
Q Consensus 99 ~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~-n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~ 177 (1078)
.+|..++++++|++|+|++ |.+.+.+|..|+++++|++|+|++|++++.+|..++.+++|+
T Consensus 67 ------------------~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~ 128 (313)
T 1ogq_A 67 ------------------PIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLV 128 (313)
T ss_dssp ------------------ECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCC
T ss_pred ------------------ccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCC
Confidence 4555555555555555553 555555555555555555555555555555555555555555
Q ss_pred eeecccccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccC-CCCeeecCCcccCCCCCCcccCCCCCcEEecccc
Q 039595 178 EFSFCHNNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLK-SLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKN 256 (1078)
Q Consensus 178 ~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 256 (1078)
+|++++|.+++.+|..++++++|++|+|++|++++.+|..+++++ +|++|+|++|++++.+|..+..++ |++|+|++|
T Consensus 129 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N 207 (313)
T 1ogq_A 129 TLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRN 207 (313)
T ss_dssp EEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSS
T ss_pred EEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCC
Confidence 555555555555555555666666666666666555555555555 566666666666655555565554 666666666
Q ss_pred ccCCCCCcccCCCcccceeecccccccCccccccccccCCceeeecccCCCCCCCccccCCCccCeeeccccccCccCCC
Q 039595 257 SLSGSIPSIIGNLKSLHQLDLIENQLSGSIPLSFGNLSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLNGVIPP 336 (1078)
Q Consensus 257 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~ 336 (1078)
++++.+|..|+++++|+.|+|++|++++.+|. +..+++|+.|++++|.+++.+|..+.++++|++|+|++|++++.+|.
T Consensus 208 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~ 286 (313)
T 1ogq_A 208 MLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ 286 (313)
T ss_dssp EEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC
T ss_pred cccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCC
Confidence 66655566666666666666666666655444 55566666666666666666666666666777777777777666665
Q ss_pred CCCCCCcCcEEEccCcc-CCC
Q 039595 337 SIGNLSSLRNLSLFNNG-LYG 356 (1078)
Q Consensus 337 ~l~~l~~L~~L~Ls~N~-l~~ 356 (1078)
. ..+++|+.|++++|. +.|
T Consensus 287 ~-~~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 287 G-GNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp S-TTGGGSCGGGTCSSSEEES
T ss_pred C-ccccccChHHhcCCCCccC
Confidence 4 666677777777766 443
No 45
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.1e-42 Score=408.93 Aligned_cols=427 Identities=26% Similarity=0.288 Sum_probs=230.1
Q ss_pred CCCCCcEEeccCCcccccCCCCCCCCCCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCccccccccccee
Q 039595 100 SFPHLVNLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEF 179 (1078)
Q Consensus 100 ~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L 179 (1078)
..++|++|++++|.+ |.+|..+++|++|++|++++|.++|.+|.+++++++|+.+++..+.. .++++|
T Consensus 9 ~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~~l~~L 76 (454)
T 1jl5_A 9 SNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------RQAHEL 76 (454)
T ss_dssp --------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------HTCSEE
T ss_pred ccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------cCCCEE
Confidence 356788888888888 77888888888888888888888888888888888877777665532 456777
Q ss_pred ecccccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccC
Q 039595 180 SFCHNNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLS 259 (1078)
Q Consensus 180 ~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 259 (1078)
++++|.+++ +|.. .++|++|++++|.+++ +|.. +++|++|++++|++++. |.. .++|++|++++|+++
T Consensus 77 ~l~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~~n~l~ 144 (454)
T 1jl5_A 77 ELNNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKAL-SDL---PPLLEYLGVSNNQLE 144 (454)
T ss_dssp ECTTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCC-CSC---CTTCCEEECCSSCCS
T ss_pred EecCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcc-cCC---CCCCCEEECcCCCCC
Confidence 888877775 4442 3678888888888876 5643 36788888888888763 321 167888888888888
Q ss_pred CCCCcccCCCcccceeecccccccCccccccccccCCceeeecccCCCCCCCccccCCCccCeeeccccccCccCCCCCC
Q 039595 260 GSIPSIIGNLKSLHQLDLIENQLSGSIPLSFGNLSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLNGVIPPSIG 339 (1078)
Q Consensus 260 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~ 339 (1078)
+ +| .|+++++|++|++++|++++ +|..+ .+|+.|++++|.+++ +| .++++++|++|++++|++++ +|...
T Consensus 145 ~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~- 214 (454)
T 1jl5_A 145 K-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP- 214 (454)
T ss_dssp S-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC-
T ss_pred C-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc-
Confidence 5 56 48888888888888888875 44433 467777777777775 44 46777777777777777765 33322
Q ss_pred CCCcCcEEEccCccCCCCCCccccccCCCCeEEcccccCccccCCCCccCCCCceeecccCcCCCCCCccccccCCCCeE
Q 039595 340 NLSSLRNLSLFNNGLYGSIPEEIGYLKSLSELKLCKNNLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLKSLTSLKRV 419 (1078)
Q Consensus 340 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L 419 (1078)
++|+.|++++|.+. .+|. ++.+++|++|++++|++++ +|.. +++|+.|++++|++.+ +|.. .++|++|
T Consensus 215 --~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L 282 (454)
T 1jl5_A 215 --LSLESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFL 282 (454)
T ss_dssp --TTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEE
T ss_pred --CcccEEECcCCcCC-cccc-cCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEE
Confidence 46777777777776 4553 6677777777777777764 3332 3566666666666654 3322 2445555
Q ss_pred EccCccccccchhhccCCCCCcEecCCCCccCCccCccccCCCCCceecccccccCCCCCccccCC-CcccEEeccCCcc
Q 039595 420 RFNQNNLVGKVYEAFGDHPNLTFLDLSQNNFDGKISFNWRNLPKLDTFIVSMNNIFGSIPLEIGDS-SKLQFLDLSSNHI 498 (1078)
Q Consensus 420 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l-~~L~~L~Ls~N~i 498 (1078)
++++|.+.++... .++|++|++++|+ +++. ..+ ++|++|++++|++
T Consensus 283 ~ls~N~l~~l~~~----~~~L~~L~l~~N~------------------------l~~i-----~~~~~~L~~L~Ls~N~l 329 (454)
T 1jl5_A 283 DVSENIFSGLSEL----PPNLYYLNASSNE------------------------IRSL-----CDLPPSLEELNVSNNKL 329 (454)
T ss_dssp ECCSSCCSEESCC----CTTCCEEECCSSC------------------------CSEE-----CCCCTTCCEEECCSSCC
T ss_pred ECcCCccCcccCc----CCcCCEEECcCCc------------------------CCcc-----cCCcCcCCEEECCCCcc
Confidence 5555555442210 1344444444444 4331 112 4678888888888
Q ss_pred CCCcccccccCccCcEEeccCCccCCCcccccccccccceeeccCccccC--CCCcccccccccccccccCcccccccch
Q 039595 499 VGKIPVQLEKLFSLNKLILSLNQLSGSVPLEFGSLTELQYLDLSANKLSS--SIPKSIGNLLKLYYLNLSNNQFSHTIPI 576 (1078)
Q Consensus 499 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 576 (1078)
++ +|.. +++|+.|++++|++++ +|. .+++|++|+|++|++++ .+|..+.+ |+.|.+.+.+|.
T Consensus 330 ~~-lp~~---~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~ 393 (454)
T 1jl5_A 330 IE-LPAL---PPRLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPE 393 (454)
T ss_dssp SC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC-------
T ss_pred cc-cccc---CCcCCEEECCCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHh--------hhhccccccccc
Confidence 75 4433 4678888888888884 444 46788888888888887 55665543 234556566665
Q ss_pred hhhcccccCeeecCCCccCC--cCCCCcccccccceeeccCccccCCcccccccCC
Q 039595 577 EFEKLIHLSKLDLSHNILQE--EIPPQVCNMESLEKLNLSHNNLSGFIPRCFEKMR 630 (1078)
Q Consensus 577 ~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~ 630 (1078)
. +++|+.||+++|++++ .+| .+|+.|.+.+|.+.+..+.....+.
T Consensus 394 ~---~~~L~~L~ls~N~l~~~~~iP------~sl~~L~~~~~~~~~~~~~~~~~~~ 440 (454)
T 1jl5_A 394 L---PQNLKQLHVETNPLREFPDIP------ESVEDLRMNSERVVDPYEFAHETTD 440 (454)
T ss_dssp --------------------------------------------------------
T ss_pred c---cCcCCEEECCCCcCCccccch------hhHhheeCcCcccCCccccCHHHhh
Confidence 3 5788999999999986 333 3467778888888877666555443
No 46
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=4.3e-42 Score=407.16 Aligned_cols=364 Identities=21% Similarity=0.220 Sum_probs=260.9
Q ss_pred CCCcEEeccCCcccccCCCCCCCCCCcceeccCCCccCCCC-CccccCccceeEEEccCccCCCCCCcccccccccceee
Q 039595 102 PHLVNLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLSGVI-SPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFS 180 (1078)
Q Consensus 102 ~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~-p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~ 180 (1078)
++|++|+|++|.+.+..|..|+++++|++|+|++|.+.+.+ |..|+++++|++|+|++|++++..|..++.+++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 78999999999999988999999999999999999998776 45799999999999999999988899999999999999
Q ss_pred cccccccCCccCc--ccCCCCCcEEEccCCCCCCCCCCc-ccccCCCCeeecCCcccCCCCCCcccCC--CCCcEEeccc
Q 039595 181 FCHNNVSGRIPSS--LGNLSKLALLYLNNNSLFGYIPTV-MGNLKSLSTLDLSQNQLNGLIPCTLDNL--SNLDTLFLYK 255 (1078)
Q Consensus 181 l~~n~~~~~~p~~--l~~l~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~p~~l~~l--~~L~~L~L~~ 255 (1078)
+++|.+++.+|.. ++++++|++|+|++|++++..|.. ++++++|++|+|++|++++..|..+..+ .+|+.|++++
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 9999999877665 999999999999999999888876 8999999999999999999999888877 7899999999
Q ss_pred cccCCCCCcc--------cCCCcccceeecccccccCccccccccc---cCCceeeecccCCCCCCCccccCCCccCeee
Q 039595 256 NSLSGSIPSI--------IGNLKSLHQLDLIENQLSGSIPLSFGNL---SSWTLMSLFSNSLSGSIPPILGNLKSLSTLG 324 (1078)
Q Consensus 256 N~l~~~~p~~--------~~~l~~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~ 324 (1078)
|.+.+..+.. +..+++|++|++++|++++..|..+... .+|+.|++++|.+.+...
T Consensus 190 n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~------------- 256 (455)
T 3v47_A 190 ITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSF------------- 256 (455)
T ss_dssp CBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCT-------------
T ss_pred CcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeecccccccccc-------------
Confidence 9999765544 3367899999999999999888887765 788999999887654321
Q ss_pred ccccccCccCCCCCCCC--CcCcEEEccCccCCCCCCccccccCCCCeEEcccccCccccCCCCccCCCCceeecccCcC
Q 039595 325 LYLNQLNGVIPPSIGNL--SSLRNLSLFNNGLYGSIPEEIGYLKSLSELKLCKNNLSGVIPHSVGNLTGLVLLNMCENHL 402 (1078)
Q Consensus 325 L~~N~l~~~~p~~l~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 402 (1078)
..+.+....+..+..+ ++|+.|++++|.+.+.+|..+..+++|++|+|++|++++..|..|.++++|++|++++|++
T Consensus 257 -~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 335 (455)
T 3v47_A 257 -GHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFL 335 (455)
T ss_dssp -TCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred -chhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCcc
Confidence 1111111111122211 3455555555555544444455555555555555555544444555555555555555555
Q ss_pred CCCCCccccccCCCCeEEccCccccccchhhccCCCCCcEecCCCCccCCccCccccCCCCCceecccccccCCCCC
Q 039595 403 FGPIPKSLKSLTSLKRVRFNQNNLVGKVYEAFGDHPNLTFLDLSQNNFDGKISFNWRNLPKLDTFIVSMNNIFGSIP 479 (1078)
Q Consensus 403 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~ 479 (1078)
.+..|..|..+++|++|++++|.+.++.+..|..+++|++|++++|+++++.+..|..+++|++|++++|.+++..|
T Consensus 336 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 336 GSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 44444455555555555555555555545555555555555555555555444445555555555555555554433
No 47
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=2.6e-41 Score=397.25 Aligned_cols=423 Identities=24% Similarity=0.295 Sum_probs=213.6
Q ss_pred CeEEEeccCccccCCcccCCccCCCCCCcEEeccCCcccccCCCCCCCCCCcceeccCCCccCCCCCccccCccceeEEE
Q 039595 77 SRVISINLSTLCLNGTFQDFSFSSFPHLVNLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLSGVISPEIGKLNQLRRLY 156 (1078)
Q Consensus 77 ~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 156 (1078)
.++..++++++.+ |.+++ .++++++|++|+|++|.+.|.+|..++++++|+++++++|.. .+|++|+
T Consensus 11 ~~L~~L~l~~n~l-~~iP~-~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~~l~~L~ 77 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPV-EAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------RQAHELE 77 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------HTCSEEE
T ss_pred ccchhhhcccCch-hhCCh-hHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------cCCCEEE
Confidence 4677899999988 88875 689999999999999999999999999999885555555432 3455555
Q ss_pred ccCccCCCCCCcccccccccceeecccccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcccCC
Q 039595 157 LDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNG 236 (1078)
Q Consensus 157 L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 236 (1078)
+++|.+++ +|.. .++|++|++++|.+++ +|.. +++|++|++++|++++ +|.. .++|++|++++|++++
T Consensus 78 l~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~ 145 (454)
T 1jl5_A 78 LNNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK 145 (454)
T ss_dssp CTTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS
T ss_pred ecCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC
Confidence 55555553 3331 2455555555555554 4432 2555666666666553 2221 1456666666666664
Q ss_pred CCCCcccCCCCCcEEeccccccCCCCCcccCCCcccceeecccccccCccccccccccCCceeeecccCCCCCCCccccC
Q 039595 237 LIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLDLIENQLSGSIPLSFGNLSSWTLMSLFSNSLSGSIPPILGN 316 (1078)
Q Consensus 237 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~ 316 (1078)
+| .|+++++|++|++++|++++ +|..+ .+|++|++++|++++ +| .|+.+++|+.|++++|.+++ +|...
T Consensus 146 -lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~-- 214 (454)
T 1jl5_A 146 -LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP-- 214 (454)
T ss_dssp -CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC--
T ss_pred -Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc--
Confidence 34 35666666666666666653 34332 356666666666655 33 45666666666666666654 33222
Q ss_pred CCccCeeeccccccCccCCCCCCCCCcCcEEEccCccCCCCCCccccccCCCCeEEcccccCccccCCCCccCCCCceee
Q 039595 317 LKSLSTLGLYLNQLNGVIPPSIGNLSSLRNLSLFNNGLYGSIPEEIGYLKSLSELKLCKNNLSGVIPHSVGNLTGLVLLN 396 (1078)
Q Consensus 317 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 396 (1078)
++|++|++++|+++ .+| .++.+++|+.|++++|++++ +|.. +++|++|++++|++++ +|.. .++|+.|+
T Consensus 215 -~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ 283 (454)
T 1jl5_A 215 -LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLD 283 (454)
T ss_dssp -TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEE
T ss_pred -CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEE
Confidence 36666666666666 344 36666667777777776663 3432 3566777777777665 3332 35667777
Q ss_pred cccCcCCCCCCccccccCCCCeEEccCccccccchhhccCC-CCCcEecCCCCccCCccCccccCCCCCceecccccccC
Q 039595 397 MCENHLFGPIPKSLKSLTSLKRVRFNQNNLVGKVYEAFGDH-PNLTFLDLSQNNFDGKISFNWRNLPKLDTFIVSMNNIF 475 (1078)
Q Consensus 397 L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~ 475 (1078)
+++|++++. |.. .++|++|++++|.+.++. .+ ++|++|++++|+++++... +++|++|++++|+++
T Consensus 284 ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~i~-----~~~~~L~~L~Ls~N~l~~lp~~----~~~L~~L~L~~N~l~ 350 (454)
T 1jl5_A 284 VSENIFSGL-SEL---PPNLYYLNASSNEIRSLC-----DLPPSLEELNVSNNKLIELPAL----PPRLERLIASFNHLA 350 (454)
T ss_dssp CCSSCCSEE-SCC---CTTCCEEECCSSCCSEEC-----CCCTTCCEEECCSSCCSCCCCC----CTTCCEEECCSSCCS
T ss_pred CcCCccCcc-cCc---CCcCCEEECcCCcCCccc-----CCcCcCCEEECCCCcccccccc----CCcCCEEECCCCccc
Confidence 777776652 110 146777777777776532 23 4788888888888764432 467777888888777
Q ss_pred CCCCccccCCCcccEEeccCCccCC--CcccccccCccCcEEeccCCccCCCcccccccccccceeeccCccccC--CCC
Q 039595 476 GSIPLEIGDSSKLQFLDLSSNHIVG--KIPVQLEKLFSLNKLILSLNQLSGSVPLEFGSLTELQYLDLSANKLSS--SIP 551 (1078)
Q Consensus 476 ~~~~~~~~~l~~L~~L~Ls~N~i~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~~ 551 (1078)
. +|. .+++|++|++++|++++ .+|..+.. |+.|++.+.+|.. +++|++||+++|.+++ .+|
T Consensus 351 ~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP 415 (454)
T 1jl5_A 351 E-VPE---LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPEL---PQNLKQLHVETNPLREFPDIP 415 (454)
T ss_dssp C-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC--------------------------------
T ss_pred c-ccc---hhhhccEEECCCCCCCcCCCChHHHHh--------hhhcccccccccc---cCcCCEEECCCCcCCccccch
Confidence 4 444 36788888888888887 45555442 2346666666653 4789999999999986 444
Q ss_pred cccccccccccccccCcccccccchhhhc
Q 039595 552 KSIGNLLKLYYLNLSNNQFSHTIPIEFEK 580 (1078)
Q Consensus 552 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 580 (1078)
. +|+.|.+.+|.+.+..+.....
T Consensus 416 ~------sl~~L~~~~~~~~~~~~~~~~~ 438 (454)
T 1jl5_A 416 E------SVEDLRMNSERVVDPYEFAHET 438 (454)
T ss_dssp -----------------------------
T ss_pred h------hHhheeCcCcccCCccccCHHH
Confidence 3 4677788999887766555433
No 48
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=3.4e-42 Score=383.02 Aligned_cols=257 Identities=26% Similarity=0.391 Sum_probs=213.9
Q ss_pred hcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
.++|+..+.||+|+||+||+|.. .+++.||||++.... ....+.+.+|+.++++++||||+++++++..++..++
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 94 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ----QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWV 94 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGG----CSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccc----ccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEE
Confidence 46899999999999999999965 579999999987543 2235678899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVE 908 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~ 908 (1078)
||||+++|+|.+++.. ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 95 v~e~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 167 (297)
T 3fxz_A 95 VMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 167 (297)
T ss_dssp EEECCTTCBHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEECCCCCCHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecC
Confidence 9999999999999943 3589999999999999999999999 99999999999999999999999999998876
Q ss_pred CCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCCCc
Q 039595 909 PYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSPG 988 (1078)
Q Consensus 909 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1078)
..........||+.|+|||++.+..++.++||||+||++|||++|+.||...... .... .......+....+
T Consensus 168 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~~---~~~~~~~~~~~~~--- 239 (297)
T 3fxz_A 168 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL--RALY---LIATNGTPELQNP--- 239 (297)
T ss_dssp STTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHH---HHHHHCSCCCSCG---
T ss_pred CcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHH---HHHhCCCCCCCCc---
Confidence 6555566778999999999999999999999999999999999999997533221 1111 1111111111111
Q ss_pred cHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhhh
Q 039595 989 VMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYCD 1026 (1078)
Q Consensus 989 ~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~~ 1026 (1078)
......+.+++.+||+.||++|||++|+++|+|+...
T Consensus 240 -~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~ 276 (297)
T 3fxz_A 240 -EKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIA 276 (297)
T ss_dssp -GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred -cccCHHHHHHHHHHccCChhHCcCHHHHhhChhhccc
Confidence 1122357789999999999999999999999998753
No 49
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.1e-41 Score=403.65 Aligned_cols=385 Identities=21% Similarity=0.201 Sum_probs=280.8
Q ss_pred CCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCCCCcccCCCcccceeecccccccCcc-ccccccccCCceeeec
Q 039595 224 LSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLDLIENQLSGSI-PLSFGNLSSWTLMSLF 302 (1078)
Q Consensus 224 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~l~ 302 (1078)
-+.++.+++.++. +|. +. ++|++|+|++|++++..|..|+++++|++|+|++|.+.+.+ |..|.++++|++|+++
T Consensus 12 ~~~~~c~~~~l~~-lp~-l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls 87 (455)
T 3v47_A 12 GYNAICINRGLHQ-VPE-LP--AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLD 87 (455)
T ss_dssp TTEEECCSSCCSS-CCC-CC--TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECT
T ss_pred ccccCcCCCCccc-CCC-CC--CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCC
Confidence 3467888888874 454 33 78899999999998877888888999999999998887555 4567888888888888
Q ss_pred ccCCCCCCCccccCCCccCeeeccccccCccCCC--CCCCCCcCcEEEccCccCCCCCCcc-ccccCCCCeEEcccccCc
Q 039595 303 SNSLSGSIPPILGNLKSLSTLGLYLNQLNGVIPP--SIGNLSSLRNLSLFNNGLYGSIPEE-IGYLKSLSELKLCKNNLS 379 (1078)
Q Consensus 303 ~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~--~l~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~ 379 (1078)
+|.+++..|..|+++++|++|+|++|++++..|. .|..+++|++|++++|.+.+..|.. +..+++|++|++++|+++
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~ 167 (455)
T 3v47_A 88 YNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVK 167 (455)
T ss_dssp TCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBS
T ss_pred CCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCccc
Confidence 8888777777788888888888888887764433 3777778888888888877766665 677777888888888777
Q ss_pred cccCCCCccC--CCCceeecccCcCCCCCCcccc--------ccCCCCeEEccCccccccchhhccCC---CCCcEecCC
Q 039595 380 GVIPHSVGNL--TGLVLLNMCENHLFGPIPKSLK--------SLTSLKRVRFNQNNLVGKVYEAFGDH---PNLTFLDLS 446 (1078)
Q Consensus 380 ~~~p~~~~~l--~~L~~L~L~~N~l~~~~~~~l~--------~l~~L~~L~L~~N~l~~~~~~~~~~l---~~L~~L~Ls 446 (1078)
+..|..+.++ .+|+.|++++|.+.+..+..+. .+++|++|++++|.+.+..+..+... .+|+.|+++
T Consensus 168 ~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~ 247 (455)
T 3v47_A 168 SICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILS 247 (455)
T ss_dssp CCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECT
T ss_pred ccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeec
Confidence 7777777665 5677777777777665443322 33455555555555554444333222 444555555
Q ss_pred CCccCCccCccccCCCCCceecccccccCCCCCccccCCCcccEEeccCCccCCCccccccc--CccCcEEeccCCccCC
Q 039595 447 QNNFDGKISFNWRNLPKLDTFIVSMNNIFGSIPLEIGDSSKLQFLDLSSNHIVGKIPVQLEK--LFSLNKLILSLNQLSG 524 (1078)
Q Consensus 447 ~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~--l~~L~~L~Ls~N~l~~ 524 (1078)
+|.+.+.. +..+.+.+..+..+.. .++|+.|++++|++++
T Consensus 248 ~~~~~~~~--------------------------------------~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~ 289 (455)
T 3v47_A 248 NSYNMGSS--------------------------------------FGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFA 289 (455)
T ss_dssp TCTTTSCC--------------------------------------TTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCE
T ss_pred cccccccc--------------------------------------cchhhhccCcccccccccccCceEEEecCccccc
Confidence 44432210 1111222222222332 2577788888888877
Q ss_pred CcccccccccccceeeccCccccCCCCcccccccccccccccCcccccccchhhhcccccCeeecCCCccCCcCCCCccc
Q 039595 525 SVPLEFGSLTELQYLDLSANKLSSSIPKSIGNLLKLYYLNLSNNQFSHTIPIEFEKLIHLSKLDLSHNILQEEIPPQVCN 604 (1078)
Q Consensus 525 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 604 (1078)
..|..|..+++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..+..
T Consensus 290 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 369 (455)
T 3v47_A 290 LLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLG 369 (455)
T ss_dssp ECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTT
T ss_pred cchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccc
Confidence 77778888888888888888888777888888888888888888888777888888999999999999998877888888
Q ss_pred ccccceeeccCccccCCcccccccCCcCcEEEcccCcCCCCCCCCc
Q 039595 605 MESLEKLNLSHNNLSGFIPRCFEKMRSLSCIDICYNELQGPIPNST 650 (1078)
Q Consensus 605 l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~l~l~~N~l~~~~~~~~ 650 (1078)
+++|++|+|++|++++..+..|..+++|+.|++++|++++.+|...
T Consensus 370 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 415 (455)
T 3v47_A 370 LPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 415 (455)
T ss_dssp CTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTH
T ss_pred cccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCcch
Confidence 9999999999999998877788899999999999999999888644
No 50
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=6.7e-42 Score=385.20 Aligned_cols=256 Identities=23% Similarity=0.344 Sum_probs=212.2
Q ss_pred hhcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeE
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSF 827 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 827 (1078)
..++|++.+.||+|+||.||+|.. .+|+.||||++..... .....+.+.+|+.+++.++||||+++++++...+..|
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 90 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL--NPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLY 90 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEE
Confidence 346899999999999999999976 5899999999976532 3445677889999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccccc
Q 039595 828 LVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFV 907 (1078)
Q Consensus 828 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~ 907 (1078)
+||||+++|+|.+++.. .+.+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 91 lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 164 (328)
T 3fe3_A 91 LIMEYASGGEVFDYLVA---HGRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEF 164 (328)
T ss_dssp EEECCCTTCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGG
T ss_pred EEEECCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceec
Confidence 99999999999999843 35689999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCCceeeccccccccccccccCCCC-ccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCC
Q 039595 908 EPYSSNRTEFVGTFGYAAPEIAYTMRAT-EKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPS 986 (1078)
Q Consensus 908 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 986 (1078)
... ......+||+.|+|||++.+..+. .++||||+||++|||++|+.||+.... ......+. ......+.
T Consensus 165 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~~~~i~------~~~~~~p~ 235 (328)
T 3fe3_A 165 TVG-GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL--KELRERVL------RGKYRIPF 235 (328)
T ss_dssp SSS-CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHH------HCCCCCCT
T ss_pred CCC-CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH--HHHHHHHH------hCCCCCCC
Confidence 543 234556899999999999888765 799999999999999999999753321 11111111 11111111
Q ss_pred CccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 987 PGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 987 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
.. ..++.+++.+||..||.+|||++|+++|+|+..
T Consensus 236 -~~---s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~ 270 (328)
T 3fe3_A 236 -YM---STDCENLLKRFLVLNPIKRGTLEQIMKDRWINA 270 (328)
T ss_dssp -TS---CHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTT
T ss_pred -CC---CHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcC
Confidence 11 125778999999999999999999999999764
No 51
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=2.9e-41 Score=379.74 Aligned_cols=267 Identities=26% Similarity=0.375 Sum_probs=218.6
Q ss_pred CCccHHHHHHhhcC----------CCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhc
Q 039595 739 GKIMHEEIIKATDD----------FDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNE 807 (1078)
Q Consensus 739 ~~~~~~~~~~~~~~----------~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~ 807 (1078)
+.++++++..+++. |+..+.||+|+||.||+|..+ +|+.||||++.... ....+.+.+|+.++++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~ 98 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK----QQRRELLFNEVVIMRD 98 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT----CCSHHHHHHHHHHHTT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc----hhHHHHHHHHHHHHHh
Confidence 34667777777653 677789999999999999765 79999999986542 2346678899999999
Q ss_pred CCCCceeeEEeeeecCCeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCC
Q 039595 808 IRHRNIVKFHGFCSNARHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKN 887 (1078)
Q Consensus 808 l~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~N 887 (1078)
++||||+++++++..++..++||||+++|+|.+++.. ..+++.++..++.|++.||+|||+. +|+||||||+|
T Consensus 99 l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~N 171 (321)
T 2c30_A 99 YQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ----VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDS 171 (321)
T ss_dssp CCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred CCCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHH
Confidence 9999999999999999999999999999999999843 3589999999999999999999999 99999999999
Q ss_pred eeeCCCCcEEEecccccccccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccch
Q 039595 888 VLLDLEFEAHVSDFGIAKFVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSF 967 (1078)
Q Consensus 888 Ill~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~ 967 (1078)
|+++.++.+||+|||+++.............||+.|+|||++.+..++.++|||||||++|||++|+.||..... .
T Consensus 172 Ill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~--~-- 247 (321)
T 2c30_A 172 ILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP--V-- 247 (321)
T ss_dssp EEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--H--
T ss_pred EEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--H--
Confidence 999999999999999998776544445667899999999999999999999999999999999999999753321 1
Q ss_pred hhhhhhhhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 968 SNMIIEVNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 968 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
...........+.... .......+.+++.+||+.||++|||++|+++|+|+..
T Consensus 248 -~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~ 300 (321)
T 2c30_A 248 -QAMKRLRDSPPPKLKN----SHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQ 300 (321)
T ss_dssp -HHHHHHHHSSCCCCTT----GGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGG
T ss_pred -HHHHHHhcCCCCCcCc----cccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcc
Confidence 1111111222222211 1111235778899999999999999999999999864
No 52
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.4e-41 Score=383.71 Aligned_cols=259 Identities=21% Similarity=0.274 Sum_probs=213.6
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
.++|++.+.||+|+||+||+|+.+ +|+.||+|++++.... .....+.+.+|+.+++.++||||+++++++.+.+..|+
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 82 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVII-AKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCF 82 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhh-hhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEE
Confidence 368999999999999999999665 7999999999764321 12345678899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVE 908 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~ 908 (1078)
||||+++|+|.+++.+ .+.+++.+++.++.||+.||+|||++ +|+||||||+||+++.+|.+||+|||+++...
T Consensus 83 v~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 156 (337)
T 1o6l_A 83 VMEYANGGELFFHLSR---ERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156 (337)
T ss_dssp EEECCTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcc
Confidence 9999999999999843 35689999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCCCc
Q 039595 909 PYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSPG 988 (1078)
Q Consensus 909 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1078)
.........+||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+.. -...++. .
T Consensus 157 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--~~~~~~~i~~----~~~~~p~---~ 227 (337)
T 1o6l_A 157 SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD--HERLFELILM----EEIRFPR---T 227 (337)
T ss_dssp CTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHH----CCCCCCT---T
T ss_pred cCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC--HHHHHHHHHc----CCCCCCC---C
Confidence 44445566789999999999999999999999999999999999999975322 1111111111 1111111 1
Q ss_pred cHHHHHHHHHHHHhcccCCCCCCC-----ChhHHHHHhhhhhhH
Q 039595 989 VMDKLISIMEVAILCLDESPEARP-----TMEKGFGHHIGYCDE 1027 (1078)
Q Consensus 989 ~~~~~~~l~~li~~cl~~dP~~RP-----t~~ell~h~~~~~~~ 1027 (1078)
. ..++.+++.+||+.||++|| +++|+++|+|+..-+
T Consensus 228 ~---s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~~ 268 (337)
T 1o6l_A 228 L---SPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN 268 (337)
T ss_dssp S---CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCC
T ss_pred C---CHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCCC
Confidence 1 12577899999999999999 999999999987543
No 53
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.7e-42 Score=386.77 Aligned_cols=256 Identities=24% Similarity=0.343 Sum_probs=201.9
Q ss_pred hhcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeE
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSF 827 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 827 (1078)
..++|++.+.||+|+||+||+|.. .+|+.||||++...... ...+.+.+|+.++++++||||+++++++.+.+..+
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~---~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~ 84 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG---SDLPRIKTEIEALKNLRHQHICQLYHVLETANKIF 84 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC------CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc---hHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEE
Confidence 457899999999999999999965 57999999999765432 23456889999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccccc
Q 039595 828 LVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFV 907 (1078)
Q Consensus 828 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~ 907 (1078)
+||||+++|+|.+++.. ...+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++...
T Consensus 85 lv~E~~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~ 158 (347)
T 3zgw_A 85 MVLEYCPGGELFDYIIS---QDRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKP 158 (347)
T ss_dssp EEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC-
T ss_pred EEEeCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccc
Confidence 99999999999999843 34689999999999999999999999 9999999999999999999999999999865
Q ss_pred cCCC-CCceeeccccccccccccccCCC-CccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCC
Q 039595 908 EPYS-SNRTEFVGTFGYAAPEIAYTMRA-TEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTP 985 (1078)
Q Consensus 908 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 985 (1078)
.... ......+||+.|+|||++.+..+ +.++||||+||++|||++|+.||+.... ......+.. .....+
T Consensus 159 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~--~~~~~~i~~------~~~~~p 230 (347)
T 3zgw_A 159 KGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNV--MALYKKIMR------GKYDVP 230 (347)
T ss_dssp -------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHH------TCCCCC
T ss_pred cCCCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHc------CCCCCC
Confidence 4332 22355689999999999988775 8999999999999999999999753221 111111111 111111
Q ss_pred CCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 986 SPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 986 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
.... ..+.+++.+||+.||++|||++|+++|+|+..
T Consensus 231 -~~~s---~~~~~li~~~L~~dP~~Rps~~eil~hp~~~~ 266 (347)
T 3zgw_A 231 -KWLS---PSSILLLQQMLQVDPKKRISMKNLLNHPWIMQ 266 (347)
T ss_dssp -TTCC---HHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHT
T ss_pred -CCCC---HHHHHHHHHHcccCHhHCcCHHHHhcCcchhc
Confidence 1111 25678999999999999999999999999764
No 54
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=2.7e-41 Score=384.75 Aligned_cols=262 Identities=21% Similarity=0.222 Sum_probs=212.8
Q ss_pred hhcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCC--hhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCe
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGN--MADQDEFLNVVLALNEIRHRNIVKFHGFCSNARH 825 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 825 (1078)
..++|++.+.||+|+||+||+|..+ +|+.||+|++........ ....+.+.+|+.++++++||||+++++++.++..
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 3467999999999999999999665 799999999976543221 2245778999999999999999999999999999
Q ss_pred eEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCC----cEEEecc
Q 039595 826 SFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEF----EAHVSDF 901 (1078)
Q Consensus 826 ~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~----~~kl~Df 901 (1078)
.++||||+++|+|.+++.. ...+++.++..++.||+.||+|||++ +|+||||||+||+++.++ .+||+||
T Consensus 90 ~~lv~e~~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DF 163 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQ---KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (361)
T ss_dssp EEEEEECCCSCBHHHHHTT---CSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEec
Confidence 9999999999999999943 45689999999999999999999999 999999999999998877 7999999
Q ss_pred cccccccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCC
Q 039595 902 GIAKFVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPR 981 (1078)
Q Consensus 902 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 981 (1078)
|++...... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||..... ......+ ....
T Consensus 164 G~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~--~~~~~~i------~~~~ 234 (361)
T 2yab_A 164 GLAHEIEDG-VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--QETLANI------TAVS 234 (361)
T ss_dssp SSCEECCTT-CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHHH------HTTC
T ss_pred CCceEcCCC-CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHH------HhcC
Confidence 999876543 233456799999999999999999999999999999999999999753221 1111111 1111
Q ss_pred CCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 982 LSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 982 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
...+..........+.+++.+||..||++|||++|+++|||+..
T Consensus 235 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~ 278 (361)
T 2yab_A 235 YDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278 (361)
T ss_dssp CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSC
T ss_pred CCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCC
Confidence 11110000111235788999999999999999999999999874
No 55
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=2.7e-41 Score=394.93 Aligned_cols=262 Identities=21% Similarity=0.256 Sum_probs=212.6
Q ss_pred hhcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeE
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSF 827 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 827 (1078)
..++|++.+.||+|+||+||+|.. .+|+.||+|++..... ...+.+.+.+|+.++++++||||+++++++.+++..|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 86 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL--SARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHY 86 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSC--HHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEE
Confidence 457899999999999999999965 5789999999976532 2334567899999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeC---CCCcEEEeccccc
Q 039595 828 LVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLD---LEFEAHVSDFGIA 904 (1078)
Q Consensus 828 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~---~~~~~kl~DfG~a 904 (1078)
+||||+++|+|.+++.. ...+++.++..++.||+.||+|||++ +|+||||||+||+++ .++.+||+|||++
T Consensus 87 lv~E~~~gg~L~~~i~~---~~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a 160 (444)
T 3soa_A 87 LIFDLVTGGELFEDIVA---REYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLA 160 (444)
T ss_dssp EEECCCBCCBHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSC
T ss_pred EEEEeCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCcee
Confidence 99999999999998843 35689999999999999999999999 999999999999998 4688999999999
Q ss_pred ccccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCC
Q 039595 905 KFVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLST 984 (1078)
Q Consensus 905 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 984 (1078)
+.............||+.|+|||++.+..++.++||||+||++|+|++|+.||.... .......+.. .....
T Consensus 161 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~--~~~~~~~i~~------~~~~~ 232 (444)
T 3soa_A 161 IEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED--QHRLYQQIKA------GAYDF 232 (444)
T ss_dssp BCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHH------TCCCC
T ss_pred EEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCcc--HHHHHHHHHh------CCCCC
Confidence 877655544556789999999999999999999999999999999999999975322 1112221111 11111
Q ss_pred CCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhhh
Q 039595 985 PSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYCD 1026 (1078)
Q Consensus 985 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~~ 1026 (1078)
+.+.......++.+++.+||+.||++|||++|+++|||....
T Consensus 233 ~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~~ 274 (444)
T 3soa_A 233 PSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHR 274 (444)
T ss_dssp CTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTHHH
T ss_pred CccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCccccCC
Confidence 111111122357789999999999999999999999998643
No 56
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.1e-41 Score=387.13 Aligned_cols=259 Identities=24% Similarity=0.309 Sum_probs=207.0
Q ss_pred hhcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcC-CCCceeeEEeeeecCCee
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEI-RHRNIVKFHGFCSNARHS 826 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 826 (1078)
..++|++.+.||+|+||+||+|+.+ +|+.||||++.+.... .....+.+.+|..+++.+ +||||+++++++.+.+..
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~-~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 99 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVIL-QDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL 99 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH-HHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhc-chhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEE
Confidence 4578999999999999999999764 6899999999764321 223456678899999988 799999999999999999
Q ss_pred EEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccc
Q 039595 827 FLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKF 906 (1078)
Q Consensus 827 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~ 906 (1078)
|+||||+++|+|.+++.+ ...+++.+++.++.||+.||+|||++ +|+||||||+|||++.+|.+||+|||+++.
T Consensus 100 ~lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~ 173 (353)
T 3txo_A 100 FFVMEFVNGGDLMFHIQK---SRRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKE 173 (353)
T ss_dssp EEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceee
Confidence 999999999999999943 35689999999999999999999999 999999999999999999999999999986
Q ss_pred ccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCC
Q 039595 907 VEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPS 986 (1078)
Q Consensus 907 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 986 (1078)
...........+||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.. .....+
T Consensus 174 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--~~~~~~i~~------~~~~~p- 244 (353)
T 3txo_A 174 GICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE--DDLFEAILN------DEVVYP- 244 (353)
T ss_dssp SCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHH------CCCCCC-
T ss_pred cccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH--HHHHHHHHc------CCCCCC-
Confidence 54444455667899999999999999999999999999999999999999753322 112221111 111111
Q ss_pred CccHHHHHHHHHHHHhcccCCCCCCCCh------hHHHHHhhhhhh
Q 039595 987 PGVMDKLISIMEVAILCLDESPEARPTM------EKGFGHHIGYCD 1026 (1078)
Q Consensus 987 ~~~~~~~~~l~~li~~cl~~dP~~RPt~------~ell~h~~~~~~ 1026 (1078)
... ...+.+++.+||+.||++||++ +|+++|+|+..-
T Consensus 245 ~~~---~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~ 287 (353)
T 3txo_A 245 TWL---HEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEI 287 (353)
T ss_dssp TTS---CHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTC
T ss_pred CCC---CHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCC
Confidence 111 1257789999999999999998 899999998753
No 57
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=2.3e-41 Score=388.58 Aligned_cols=265 Identities=25% Similarity=0.328 Sum_probs=210.6
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcC-CCCceeeEEeeeecCCeeE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEI-RHRNIVKFHGFCSNARHSF 827 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 827 (1078)
.++|++.+.||+|+||+||+|+.+ +++.||+|++++.... .....+.+..|..++.++ +||||+++++++.+.+..|
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~-~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 129 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVN-DDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 129 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC-----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhcc-CHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence 468999999999999999999765 6889999999875432 223344577888888876 8999999999999999999
Q ss_pred EEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccccc
Q 039595 828 LVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFV 907 (1078)
Q Consensus 828 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~ 907 (1078)
+||||+++|+|.+++.+ ...+++..++.++.||+.||+|||++ +|+||||||+|||++.+|.+||+|||+++..
T Consensus 130 lV~E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~ 203 (396)
T 4dc2_A 130 FVIEYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 203 (396)
T ss_dssp EEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEEcCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeec
Confidence 99999999999999943 35699999999999999999999999 9999999999999999999999999999865
Q ss_pred cCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchh-hhhhhhhhhcCCCCCCCC
Q 039595 908 EPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFS-NMIIEVNQILDPRLSTPS 986 (1078)
Q Consensus 908 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 986 (1078)
..........+||+.|+|||++.+..++.++||||+||++|||++|+.||+.......... ........+.......+
T Consensus 204 ~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p- 282 (396)
T 4dc2_A 204 LRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP- 282 (396)
T ss_dssp CCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCC-
T ss_pred ccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCC-
Confidence 4444556677899999999999999999999999999999999999999864322110000 00001111111111111
Q ss_pred CccHHHHHHHHHHHHhcccCCCCCCCCh------hHHHHHhhhhh
Q 039595 987 PGVMDKLISIMEVAILCLDESPEARPTM------EKGFGHHIGYC 1025 (1078)
Q Consensus 987 ~~~~~~~~~l~~li~~cl~~dP~~RPt~------~ell~h~~~~~ 1025 (1078)
... ..++.+++.+||+.||++||++ +|+++|+|+..
T Consensus 283 ~~~---s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~ 324 (396)
T 4dc2_A 283 RSL---SVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 324 (396)
T ss_dssp TTS---CHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTT
T ss_pred CcC---CHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccC
Confidence 111 1257789999999999999995 79999999865
No 58
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=8.4e-41 Score=374.38 Aligned_cols=268 Identities=19% Similarity=0.249 Sum_probs=208.0
Q ss_pred hhcCCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
..++|++.+.||+|+||+||+|...+|+.||+|++..... .....+.+.+|+.++++++||||+++++++.++...++
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 96 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAE--DEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTL 96 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC--------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEE
T ss_pred hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccc--cchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEE
Confidence 3578999999999999999999888899999999975432 22335678899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVE 908 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~ 908 (1078)
||||+++ +|.+++... ...+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 97 v~e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 170 (311)
T 3niz_A 97 VFEFMEK-DLKKVLDEN--KTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFG 170 (311)
T ss_dssp EEECCSE-EHHHHHHTC--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETT
T ss_pred EEcCCCC-CHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecC
Confidence 9999986 888887543 34589999999999999999999999 99999999999999999999999999998876
Q ss_pred CCCCCceeecccccccccccccc-CCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhh------------
Q 039595 909 PYSSNRTEFVGTFGYAAPEIAYT-MRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVN------------ 975 (1078)
Q Consensus 909 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~------------ 975 (1078)
..........||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ..........
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~ 249 (311)
T 3niz_A 171 IPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD-QLPKIFSILGTPNPREWPQVQE 249 (311)
T ss_dssp SCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT-HHHHHHHHHCCCCTTTSGGGTT
T ss_pred CCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHHCCCChHHhhhhhc
Confidence 55555566788999999999876 568999999999999999999999976433221 1111100000
Q ss_pred --hhcCCCCCCCCCccH-----HHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 976 --QILDPRLSTPSPGVM-----DKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 976 --~~~~~~~~~~~~~~~-----~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
............... ....++.+++.+||+.||++|||++|+++|||+..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~ 306 (311)
T 3niz_A 250 LPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306 (311)
T ss_dssp SHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTT
T ss_pred cchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCccccc
Confidence 000000000000000 01136789999999999999999999999999763
No 59
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-41 Score=379.17 Aligned_cols=257 Identities=21% Similarity=0.248 Sum_probs=210.8
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
.++|++.+.||+|+||+||+|..+ +++.||+|++... ....+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 78 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-----GTDQVLVKKEISILNIARHRNILHLHESFESMEELVM 78 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-----THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-----cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEE
Confidence 468999999999999999999664 6889999998643 2345678899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCC--CCcEEEeccccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDL--EFEAHVSDFGIAKF 906 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~--~~~~kl~DfG~a~~ 906 (1078)
||||+++|+|.+++... ...+++.+++.++.||+.||+|||++ +|+||||||+||+++. ++.+||+|||+++.
T Consensus 79 v~e~~~g~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~ 153 (321)
T 1tki_A 79 IFEFISGLDIFERINTS--AFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQ 153 (321)
T ss_dssp EECCCCCCBHHHHHTSS--SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEE
T ss_pred EEEeCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeE
Confidence 99999999999999432 34689999999999999999999999 9999999999999987 78999999999987
Q ss_pred ccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCC
Q 039595 907 VEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPS 986 (1078)
Q Consensus 907 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 986 (1078)
.... .......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ...... +.......+.
T Consensus 154 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~------i~~~~~~~~~ 224 (321)
T 1tki_A 154 LKPG-DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN--QQIIEN------IMNAEYTFDE 224 (321)
T ss_dssp CCTT-CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHH------HHHTCCCCCH
T ss_pred CCCC-CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH--HHHHHH------HHcCCCCCCh
Confidence 7542 334567899999999999998899999999999999999999999753322 111111 1111111111
Q ss_pred CccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 987 PGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 987 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
........++.+++.+||..||++|||++|+++|||+..
T Consensus 225 ~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~ 263 (321)
T 1tki_A 225 EAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQ 263 (321)
T ss_dssp HHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHS
T ss_pred hhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhcc
Confidence 001111236789999999999999999999999999764
No 60
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.8e-41 Score=377.15 Aligned_cols=264 Identities=20% Similarity=0.255 Sum_probs=212.8
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccC--ChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCee
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSG--NMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHS 826 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 826 (1078)
.++|++.+.||+|+||.||+|..+ +|+.||+|++....... .....+.+.+|+.++++++||||+++++++.++...
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 356999999999999999999664 68999999997654321 122467899999999999999999999999999999
Q ss_pred EEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCC----cEEEeccc
Q 039595 827 FLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEF----EAHVSDFG 902 (1078)
Q Consensus 827 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~----~~kl~DfG 902 (1078)
++||||+++|+|.+++.. ...+++.+++.++.||+.||+|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 90 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 163 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163 (326)
T ss_dssp EEEEECCCSCBHHHHHTT---SSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEEcCCCCCHHHHHHh---cCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence 999999999999999943 45689999999999999999999999 999999999999999887 89999999
Q ss_pred ccccccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCC
Q 039595 903 IAKFVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRL 982 (1078)
Q Consensus 903 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 982 (1078)
+++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.. .....
T Consensus 164 ~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~~~~----~~~~~ 236 (326)
T 2y0a_A 164 LAHKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--QETLANVSA----VNYEF 236 (326)
T ss_dssp TCEECCTTS-CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHHHHH----TCCCC
T ss_pred CCeECCCCC-ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH--HHHHHHHHh----cCCCc
Confidence 998765422 23456799999999999999999999999999999999999999753221 111111111 11111
Q ss_pred CCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhhhHH
Q 039595 983 STPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYCDEI 1028 (1078)
Q Consensus 983 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~~~~ 1028 (1078)
.. .........+.+++.+||+.||++|||++|+++|+|+.....
T Consensus 237 ~~--~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~ 280 (326)
T 2y0a_A 237 ED--EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDT 280 (326)
T ss_dssp CH--HHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSCCSH
T ss_pred Cc--cccccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCccCCcc
Confidence 10 000011235778999999999999999999999999876544
No 61
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=7.7e-41 Score=382.27 Aligned_cols=260 Identities=22% Similarity=0.289 Sum_probs=212.2
Q ss_pred hhcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeE
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSF 827 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 827 (1078)
..++|++.+.||+|+||.||+|..+ +|+.||+|++..... .....+.+.+|+.++++++||||+++++++.+++..|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ 104 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL--SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHY 104 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE
Confidence 3568999999999999999999664 689999999976532 2345677899999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCC---CcEEEeccccc
Q 039595 828 LVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLE---FEAHVSDFGIA 904 (1078)
Q Consensus 828 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~---~~~kl~DfG~a 904 (1078)
+||||+++|+|.+++.. ...+++.++..++.||+.||+|||++ +|+||||||+||+++.+ +.+||+|||++
T Consensus 105 lv~e~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a 178 (362)
T 2bdw_A 105 LVFDLVTGGELFEDIVA---REFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA 178 (362)
T ss_dssp EEECCCCSCBHHHHHTT---CSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcc
Confidence 99999999999999843 35689999999999999999999999 99999999999999865 45999999999
Q ss_pred ccccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCC
Q 039595 905 KFVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLST 984 (1078)
Q Consensus 905 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 984 (1078)
...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.. .....
T Consensus 179 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~--~~~~~~i~~------~~~~~ 249 (362)
T 2bdw_A 179 IEVNDS-EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--HRLYAQIKA------GAYDY 249 (362)
T ss_dssp BCCTTC-CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHH------TCCCC
T ss_pred eEecCC-cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHh------CCCCC
Confidence 876542 233456899999999999999999999999999999999999999653221 111111111 11111
Q ss_pred CCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 985 PSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 985 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
+.+.......++.+++.+||+.||++|||++|+++|+|+..
T Consensus 250 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~ 290 (362)
T 2bdw_A 250 PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICN 290 (362)
T ss_dssp CTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHHT
T ss_pred CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcccCC
Confidence 11111222346788999999999999999999999999864
No 62
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=8.4e-41 Score=379.05 Aligned_cols=265 Identities=26% Similarity=0.330 Sum_probs=212.5
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcC-CCCceeeEEeeeecCCeeE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEI-RHRNIVKFHGFCSNARHSF 827 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 827 (1078)
.++|++.+.||+|+||.||+|+.+ +++.||+|++.+.... .....+.+.+|..+++++ +||||+++++++.+....|
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 86 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVN-DDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 86 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSC-SHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhc-chHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEE
Confidence 367999999999999999999765 6889999999865432 344556788999999887 8999999999999999999
Q ss_pred EEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccccc
Q 039595 828 LVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFV 907 (1078)
Q Consensus 828 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~ 907 (1078)
+||||+++|+|.+++.+ ...+++..++.++.||+.||+|||++ +|+||||||+||+++.+|.+||+|||+++..
T Consensus 87 lv~e~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~ 160 (345)
T 3a8x_A 87 FVIEYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 160 (345)
T ss_dssp EEECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCS
T ss_pred EEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccc
Confidence 99999999999999943 34689999999999999999999999 9999999999999999999999999999865
Q ss_pred cCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccch-hhhhhhhhhhcCCCCCCCC
Q 039595 908 EPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSF-SNMIIEVNQILDPRLSTPS 986 (1078)
Q Consensus 908 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 986 (1078)
..........+||+.|+|||++.+..++.++||||+||++|||++|+.||.......... .........+.......+
T Consensus 161 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p- 239 (345)
T 3a8x_A 161 LRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP- 239 (345)
T ss_dssp CCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCC-
T ss_pred cCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCC-
Confidence 444444566789999999999999999999999999999999999999986432111000 000000111111111111
Q ss_pred CccHHHHHHHHHHHHhcccCCCCCCCCh------hHHHHHhhhhh
Q 039595 987 PGVMDKLISIMEVAILCLDESPEARPTM------EKGFGHHIGYC 1025 (1078)
Q Consensus 987 ~~~~~~~~~l~~li~~cl~~dP~~RPt~------~ell~h~~~~~ 1025 (1078)
... ...+.+++.+||+.||++||++ +|+++|+|+..
T Consensus 240 ~~~---s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~ 281 (345)
T 3a8x_A 240 RSL---SVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 281 (345)
T ss_dssp TTS---CHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTT
T ss_pred CCC---CHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCC
Confidence 111 2257789999999999999995 89999999864
No 63
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=2.7e-41 Score=384.93 Aligned_cols=265 Identities=20% Similarity=0.213 Sum_probs=212.2
Q ss_pred hcCCCccceeccCCceeEEEEEe-CCCCEEEEEEecccccc-CChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLS-GNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSF 827 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 827 (1078)
.++|++.+.||+|+||+||+|.. .+|+.||||++...... ......+.+.+|+.+++.++||||+++++++.+++..|
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 46799999999999999999965 47999999998653321 12224677899999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhcCCC-CCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCc---EEEecccc
Q 039595 828 LVCEYLHRGSLARILGNDA-TAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFE---AHVSDFGI 903 (1078)
Q Consensus 828 lv~E~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~---~kl~DfG~ 903 (1078)
+||||+++|+|.+++.... ....+++..+..++.||+.||+|||++ +|+||||||+||+++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 9999999999988874322 234589999999999999999999999 9999999999999987654 99999999
Q ss_pred cccccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCC
Q 039595 904 AKFVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLS 983 (1078)
Q Consensus 904 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 983 (1078)
++............+||+.|+|||++.+..++.++||||+||++|||++|+.||..... ..... +......
T Consensus 180 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---~~~~~------i~~~~~~ 250 (351)
T 3c0i_A 180 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE---RLFEG------IIKGKYK 250 (351)
T ss_dssp CEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH---HHHHH------HHHTCCC
T ss_pred eeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH---HHHHH------HHcCCCC
Confidence 98876544445567899999999999999999999999999999999999999753221 11111 1111111
Q ss_pred CCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhhh
Q 039595 984 TPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYCD 1026 (1078)
Q Consensus 984 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~~ 1026 (1078)
............+.+++.+||+.||++|||++|+++|+|+...
T Consensus 251 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~ 293 (351)
T 3c0i_A 251 MNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKER 293 (351)
T ss_dssp CCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTH
T ss_pred CCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcCC
Confidence 1100001112367889999999999999999999999998753
No 64
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=4.9e-41 Score=378.94 Aligned_cols=259 Identities=22% Similarity=0.297 Sum_probs=200.6
Q ss_pred hcCCCccceeccCCceeEEEEEe----CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCe
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAEL----PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARH 825 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 825 (1078)
.++|++.+.||+|+||.||+|+. .+|+.||+|++++............+.+|+.++++++||||+++++++..++.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46899999999999999999976 47899999999876443334455678899999999999999999999999999
Q ss_pred eEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccc
Q 039595 826 SFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAK 905 (1078)
Q Consensus 826 ~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~ 905 (1078)
.|+||||+++|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~ 169 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLER---EGIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCK 169 (327)
T ss_dssp EEEEEECCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred EEEEEeCCCCCcHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCccc
Confidence 9999999999999999943 34688999999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCC
Q 039595 906 FVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTP 985 (1078)
Q Consensus 906 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 985 (1078)
.............||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+... ...++.
T Consensus 170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~i~~~----~~~~p~- 242 (327)
T 3a62_A 170 ESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR--KKTIDKILKC----KLNLPP- 242 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHT----CCCCCT-
T ss_pred ccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH--HHHHHHHHhC----CCCCCC-
Confidence 654433344556799999999999999999999999999999999999999753322 1111111111 111111
Q ss_pred CCccHHHHHHHHHHHHhcccCCCCCCC-----ChhHHHHHhhhhhh
Q 039595 986 SPGVMDKLISIMEVAILCLDESPEARP-----TMEKGFGHHIGYCD 1026 (1078)
Q Consensus 986 ~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~ell~h~~~~~~ 1026 (1078)
.. ...+.+++.+||+.||++|| +++|+++|+|+..-
T Consensus 243 --~~---~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~ 283 (327)
T 3a62_A 243 --YL---TQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHI 283 (327)
T ss_dssp --TS---CHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSC
T ss_pred --CC---CHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCC
Confidence 11 12577899999999999999 88999999998753
No 65
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=9.1e-41 Score=377.26 Aligned_cols=279 Identities=33% Similarity=0.592 Sum_probs=224.4
Q ss_pred CccHHHHHHhhcCCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEee
Q 039595 740 KIMHEEIIKATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGF 819 (1078)
Q Consensus 740 ~~~~~~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~ 819 (1078)
.++.+++....++|+..+.||+|+||.||+|..++|+.||||++...... .....+.+|+.++++++||||++++++
T Consensus 19 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~ 95 (326)
T 3uim_A 19 RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQ---GGELQFQTEVEMISMAVHRNLLRLRGF 95 (326)
T ss_dssp ECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC--------CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred eecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCc---hHHHHHHHHHHHHHhccCCCccceEEE
Confidence 46678899999999999999999999999998888999999999765322 122358899999999999999999999
Q ss_pred eecCCeeEEEEeecCCCCHHHHhcCCC-CCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEE
Q 039595 820 CSNARHSFLVCEYLHRGSLARILGNDA-TAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHV 898 (1078)
Q Consensus 820 ~~~~~~~~lv~E~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl 898 (1078)
+..+...++||||+++|+|.+++.... ....+++..+..++.|++.||+|||+++.++|+||||||+||+++.++.+||
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl 175 (326)
T 3uim_A 96 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 175 (326)
T ss_dssp ECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEE
T ss_pred EecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEe
Confidence 999999999999999999999996543 3345999999999999999999999986678999999999999999999999
Q ss_pred ecccccccccCCCCC-ceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccc---cchhhhhh--
Q 039595 899 SDFGIAKFVEPYSSN-RTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINF---SSFSNMII-- 972 (1078)
Q Consensus 899 ~DfG~a~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~---~~~~~~~~-- 972 (1078)
+|||+++........ .....||+.|+|||++.+..++.++||||+||++|||++|+.||+...... ........
T Consensus 176 ~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 255 (326)
T 3uim_A 176 GDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255 (326)
T ss_dssp CCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTT
T ss_pred ccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHH
Confidence 999999876543322 344569999999999998899999999999999999999999986322111 00101000
Q ss_pred ----hhhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhh
Q 039595 973 ----EVNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIG 1023 (1078)
Q Consensus 973 ----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~ 1023 (1078)
......+..... .........+.+++.+||+.||++|||++|+++|+..
T Consensus 256 ~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 256 LKEKKLEALVDVDLQG--NYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp TSSCCSTTSSCTTCTT--SCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred hhchhhhhhcChhhcc--ccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 011112222221 2234556789999999999999999999999999864
No 66
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.1e-40 Score=369.54 Aligned_cols=266 Identities=23% Similarity=0.302 Sum_probs=204.6
Q ss_pred cCCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEEEE
Q 039595 751 DDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFLVC 830 (1078)
Q Consensus 751 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 830 (1078)
++|++.+.||+|+||+||+|...+|+.||+|++..... .....+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKE--DEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVF 79 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSG--GGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEecccc--ccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEE
Confidence 57999999999999999999888899999999975432 2223466889999999999999999999999999999999
Q ss_pred eecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccccccCC
Q 039595 831 EYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVEPY 910 (1078)
Q Consensus 831 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~~~ 910 (1078)
||+++ +|.+++... ...+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||.++.....
T Consensus 80 e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 153 (288)
T 1ob3_A 80 EHLDQ-DLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIP 153 (288)
T ss_dssp ECCSE-EHHHHHHTS--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-
T ss_pred EecCC-CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCcc
Confidence 99986 999988543 35689999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCCceeeccccccccccccccC-CCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhh-------------h
Q 039595 911 SSNRTEFVGTFGYAAPEIAYTM-RATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVN-------------Q 976 (1078)
Q Consensus 911 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~-------------~ 976 (1078)
........||+.|+|||++.+. .++.++||||+||++|||++|+.||...... ........... .
T Consensus 154 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T 1ob3_A 154 VRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA-DQLMRIFRILGTPNSKNWPNVTELP 232 (288)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCTTTSTTGGGST
T ss_pred ccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHHCCCChhhchhhhccc
Confidence 4444556789999999998764 5899999999999999999999997643221 00111000000 0
Q ss_pred hcCCCCCCCCCc-----cHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 977 ILDPRLSTPSPG-----VMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 977 ~~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
..++......+. ......++.+++.+||+.||++|||++|+++|+|+..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~ 286 (288)
T 1ob3_A 233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286 (288)
T ss_dssp TCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred ccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhh
Confidence 011111100000 0011235778999999999999999999999999753
No 67
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.3e-40 Score=369.65 Aligned_cols=267 Identities=19% Similarity=0.252 Sum_probs=207.1
Q ss_pred cCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEEE
Q 039595 751 DDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFLV 829 (1078)
Q Consensus 751 ~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 829 (1078)
++|++.+.||+|+||+||+|... +++.||||++..... .....+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 79 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD--DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLV 79 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS--STTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCC--cCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEE
Confidence 57999999999999999999664 689999999976542 233456788999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccccccC
Q 039595 830 CEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVEP 909 (1078)
Q Consensus 830 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~~ 909 (1078)
|||+++ ++.+++.. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.++....
T Consensus 80 ~e~~~~-~l~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 153 (292)
T 3o0g_A 80 FEFCDQ-DLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGI 153 (292)
T ss_dssp EECCSE-EHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCS
T ss_pred EecCCC-CHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCC
Confidence 999987 55555532 235689999999999999999999999 999999999999999999999999999987765
Q ss_pred CCCCceeeccccccccccccccCC-CCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCC--------
Q 039595 910 YSSNRTEFVGTFGYAAPEIAYTMR-ATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDP-------- 980 (1078)
Q Consensus 910 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~-------- 980 (1078)
.........||+.|+|||++.+.. ++.++||||+||++|||++|+.||.......................
T Consensus 154 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 233 (292)
T 3o0g_A 154 PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKL 233 (292)
T ss_dssp CCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGS
T ss_pred ccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccc
Confidence 555556678999999999998765 89999999999999999998888532211111111110000000000
Q ss_pred -CC---------CCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 981 -RL---------STPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 981 -~~---------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
.. .............+.+++.+||+.||++|||++|+++|||+..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~ 288 (292)
T 3o0g_A 234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288 (292)
T ss_dssp TTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred ccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCccccc
Confidence 00 0000000112236778999999999999999999999999753
No 68
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=4.7e-41 Score=375.76 Aligned_cols=263 Identities=30% Similarity=0.442 Sum_probs=202.2
Q ss_pred HHHHHhhcCCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecC
Q 039595 744 EEIIKATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNA 823 (1078)
Q Consensus 744 ~~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 823 (1078)
+++....++|++.+.||+|+||+||+|+. +|+.||||++..... .....+.+.+|+.++++++||||+++++++.+.
T Consensus 30 ~~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 106 (309)
T 3p86_A 30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDF--HAERVNEFLREVAIMKRLRHPNIVLFMGAVTQP 106 (309)
T ss_dssp --CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCC--SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred ccccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC
Confidence 34444567899999999999999999977 588999999876532 344466789999999999999999999999999
Q ss_pred CeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCC--cEecCCCCCCeeeCCCCcEEEecc
Q 039595 824 RHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPS--IIHRDISSKNVLLDLEFEAHVSDF 901 (1078)
Q Consensus 824 ~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlk~~NIll~~~~~~kl~Df 901 (1078)
+..++||||+++|+|.+++........+++..++.++.|++.||+|||++ + |+||||||+||+++.++.+||+||
T Consensus 107 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Df 183 (309)
T 3p86_A 107 PNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDF 183 (309)
T ss_dssp TCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCC
T ss_pred CceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCC
Confidence 99999999999999999996654445699999999999999999999999 8 999999999999999999999999
Q ss_pred cccccccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCC
Q 039595 902 GIAKFVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPR 981 (1078)
Q Consensus 902 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 981 (1078)
|+++.............||+.|+|||++.+..++.++|||||||++|||++|+.||...... .... .. ......
T Consensus 184 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~--~~~~---~~-~~~~~~ 257 (309)
T 3p86_A 184 GLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA--QVVA---AV-GFKCKR 257 (309)
T ss_dssp C-----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH--HHHH---HH-HHSCCC
T ss_pred CCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHH---HH-HhcCCC
Confidence 99986654444445678999999999999999999999999999999999999997643321 1111 11 011111
Q ss_pred CCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhh
Q 039595 982 LSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHI 1022 (1078)
Q Consensus 982 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~ 1022 (1078)
... ..... ..+.+++.+||+.||++|||++|+++..-
T Consensus 258 ~~~-~~~~~---~~l~~li~~~l~~dP~~Rps~~~ll~~L~ 294 (309)
T 3p86_A 258 LEI-PRNLN---PQVAAIIEGCWTNEPWKRPSFATIMDLLR 294 (309)
T ss_dssp CCC-CTTSC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCC-CccCC---HHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 111 11112 25778999999999999999999997643
No 69
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=3.5e-41 Score=381.36 Aligned_cols=261 Identities=23% Similarity=0.290 Sum_probs=211.9
Q ss_pred HHhhcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcC-CCCceeeEEeeeecCC
Q 039595 747 IKATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEI-RHRNIVKFHGFCSNAR 824 (1078)
Q Consensus 747 ~~~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 824 (1078)
....++|++.+.||+|+||+||+|+.+ +|+.||||++++.... .....+.+..|..+++.+ +||||+++++++.+..
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~ 91 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVL-MDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE 91 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhh-hhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCC
Confidence 345678999999999999999999765 6899999999764321 122355677888888876 9999999999999999
Q ss_pred eeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccc
Q 039595 825 HSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIA 904 (1078)
Q Consensus 825 ~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a 904 (1078)
..|+||||+++|+|.+++.. .+.+++.++..++.||+.||+|||++ +|+||||||+||+++.+|.+||+|||++
T Consensus 92 ~~~lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a 165 (345)
T 1xjd_A 92 NLFFVMEYLNGGDLMYHIQS---CHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMC 165 (345)
T ss_dssp EEEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEEEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhh
Confidence 99999999999999999943 35689999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCC
Q 039595 905 KFVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLST 984 (1078)
Q Consensus 905 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 984 (1078)
+............+||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.. ..+.++.
T Consensus 166 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~i~~----~~~~~p~ 239 (345)
T 1xjd_A 166 KENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE--EELFHSIRM----DNPFYPR 239 (345)
T ss_dssp BCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHH----CCCCCCT
T ss_pred hhcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHHh----CCCCCCc
Confidence 8654444445667899999999999999999999999999999999999999753321 112111111 1112211
Q ss_pred CCCccHHHHHHHHHHHHhcccCCCCCCCChh-HHHHHhhhhhh
Q 039595 985 PSPGVMDKLISIMEVAILCLDESPEARPTME-KGFGHHIGYCD 1026 (1078)
Q Consensus 985 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~-ell~h~~~~~~ 1026 (1078)
. . ..++.+++.+||..||++||++. |+++|+|+..-
T Consensus 240 ~---~---s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~~ 276 (345)
T 1xjd_A 240 W---L---EKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI 276 (345)
T ss_dssp T---S---CHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred c---c---CHHHHHHHHHHhcCCHhHcCCChHHHHcCccccCC
Confidence 1 1 12577899999999999999998 99999998653
No 70
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.6e-41 Score=379.84 Aligned_cols=255 Identities=21% Similarity=0.259 Sum_probs=207.0
Q ss_pred hcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
.++|++.+.||+|+||+||+|.. .+++.||||++...... .....+.+.+|+.+++.++||||+++++++..+...++
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 86 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLK-KSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVM 86 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHcc-chhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 36899999999999999999975 57999999998754321 11224568899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVE 908 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~ 908 (1078)
||||+ +|+|.+++.. .+.+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 87 v~E~~-~g~l~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~ 159 (336)
T 3h4j_B 87 VIEYA-GGELFDYIVE---KKRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMT 159 (336)
T ss_dssp EECCC-CEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTT
T ss_pred EEECC-CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceecc
Confidence 99999 6799998843 35689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCceeeccccccccccccccCCC-CccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCCC
Q 039595 909 PYSSNRTEFVGTFGYAAPEIAYTMRA-TEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSP 987 (1078)
Q Consensus 909 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 987 (1078)
.. ......+||+.|+|||++.+..+ +.++||||+||++|+|++|+.||+.... ......+ ...... .+.
T Consensus 160 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~--~~~~~~i------~~~~~~-~p~ 229 (336)
T 3h4j_B 160 DG-NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFI--PNLFKKV------NSCVYV-MPD 229 (336)
T ss_dssp TS-BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSS--TTCBCCC------CSSCCC-CCT
T ss_pred CC-cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccH--HHHHHHH------HcCCCC-Ccc
Confidence 42 23345689999999999988776 7899999999999999999999753221 1111111 011111 111
Q ss_pred ccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 988 GVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 988 ~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
.. ...+.+++.+||+.||.+|||++|+++|||+..
T Consensus 230 ~~---s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~ 264 (336)
T 3h4j_B 230 FL---SPGAQSLIRRMIVADPMQRITIQEIRRDPWFNV 264 (336)
T ss_dssp TS---CHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHT
T ss_pred cC---CHHHHHHHHHHcCCChhHCcCHHHHHhChhhcc
Confidence 11 125778999999999999999999999999764
No 71
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-40 Score=372.84 Aligned_cols=255 Identities=25% Similarity=0.345 Sum_probs=210.6
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
.++|++.+.||+|+||+||+|+.+ +|+.||+|++.+.... .....+.+.+|+.+++.++||||+++++++.+....|+
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 83 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVV-RLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFM 83 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEE
Confidence 367999999999999999999664 7999999999764321 12345678899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVE 908 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~ 908 (1078)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||++ +|+||||||+||+++.+|.+||+|||+++...
T Consensus 84 v~e~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~ 157 (318)
T 1fot_A 84 IMDYIEGGELFSLLRK---SQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVP 157 (318)
T ss_dssp EECCCCSCBHHHHHHH---TSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECS
T ss_pred EEeCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecC
Confidence 9999999999999953 34689999999999999999999999 99999999999999999999999999998754
Q ss_pred CCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCCCc
Q 039595 909 PYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSPG 988 (1078)
Q Consensus 909 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1078)
. .....+||+.|+|||++.+..++.++||||+||++|||++|+.||..... ...... +.......+ ..
T Consensus 158 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~~~~------i~~~~~~~p-~~ 225 (318)
T 1fot_A 158 D---VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT--MKTYEK------ILNAELRFP-PF 225 (318)
T ss_dssp S---CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHH------HHHCCCCCC-TT
T ss_pred C---ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--HHHHHH------HHhCCCCCC-CC
Confidence 3 23456899999999999999999999999999999999999999753221 111111 111111111 11
Q ss_pred cHHHHHHHHHHHHhcccCCCCCCC-----ChhHHHHHhhhhhh
Q 039595 989 VMDKLISIMEVAILCLDESPEARP-----TMEKGFGHHIGYCD 1026 (1078)
Q Consensus 989 ~~~~~~~l~~li~~cl~~dP~~RP-----t~~ell~h~~~~~~ 1026 (1078)
.. .++.+++.+||..||++|| +++|+++|+|+..-
T Consensus 226 ~~---~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~ 265 (318)
T 1fot_A 226 FN---EDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV 265 (318)
T ss_dssp SC---HHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred CC---HHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccCC
Confidence 11 2577899999999999999 99999999998753
No 72
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.3e-40 Score=370.80 Aligned_cols=258 Identities=24% Similarity=0.327 Sum_probs=202.1
Q ss_pred hcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCC----------------------hhhHHHHHHHHHHHh
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGN----------------------MADQDEFLNVVLALN 806 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~----------------------~~~~~~~~~e~~~l~ 806 (1078)
.++|++.+.||+|+||.||+|.. .+++.||||++........ ....+.+.+|+.+++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 46899999999999999999965 4688999999976432111 112356889999999
Q ss_pred cCCCCceeeEEeeeec--CCeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCC
Q 039595 807 EIRHRNIVKFHGFCSN--ARHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDIS 884 (1078)
Q Consensus 807 ~l~h~niv~l~~~~~~--~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 884 (1078)
+++||||+++++++.+ ....++||||+++|+|.+++ ....+++.+++.++.||+.||+|||++ +|+|||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlk 164 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP----TLKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIK 164 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS----CSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCC
Confidence 9999999999999976 67899999999999998765 235699999999999999999999999 99999999
Q ss_pred CCCeeeCCCCcEEEecccccccccCCCCCceeeccccccccccccccCC---CCccchhHHHHHHHHHHHhCCCCCCccc
Q 039595 885 SKNVLLDLEFEAHVSDFGIAKFVEPYSSNRTEFVGTFGYAAPEIAYTMR---ATEKYDVYSFGVLVFEVIKGNHPRDFFS 961 (1078)
Q Consensus 885 ~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDvwSlG~il~elltG~~p~~~~~ 961 (1078)
|+||+++.++.+||+|||+++.............||+.|+|||.+.+.. ++.++|||||||++|||++|+.||....
T Consensus 165 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 244 (298)
T 2zv2_A 165 PSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244 (298)
T ss_dssp GGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence 9999999999999999999987765444445668999999999998765 3788999999999999999999975322
Q ss_pred ccccchhhhhhhhhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhh
Q 039595 962 INFSSFSNMIIEVNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGY 1024 (1078)
Q Consensus 962 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~ 1024 (1078)
. ......+.. . ...... .+... ..+.+++.+||+.||++|||++|+++|||+.
T Consensus 245 ~--~~~~~~~~~--~--~~~~~~-~~~~~---~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~ 297 (298)
T 2zv2_A 245 I--MCLHSKIKS--Q--ALEFPD-QPDIA---EDLKDLITRMLDKNPESRIVVPEIKLHPWVT 297 (298)
T ss_dssp H--HHHHHHHHH--C--CCCCCS-SSCCC---HHHHHHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred H--HHHHHHHhc--c--cCCCCC-ccccC---HHHHHHHHHHhhcChhhCCCHHHHhcCcccc
Confidence 1 111111111 0 011111 11112 2577899999999999999999999999974
No 73
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.8e-40 Score=375.83 Aligned_cols=256 Identities=20% Similarity=0.337 Sum_probs=206.9
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCC----
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNAR---- 824 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~---- 824 (1078)
.++|++.+.||+|+||.||+|..+ +|+.||||++.... .....+.+.+|+.++++++||||+++++++.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 81 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN---RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKW 81 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS---TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC---chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchh
Confidence 467999999999999999999765 79999999997543 3345678999999999999999999999985433
Q ss_pred -----------------------------------------------------eeEEEEeecCCCCHHHHhcCCCCCCcC
Q 039595 825 -----------------------------------------------------HSFLVCEYLHRGSLARILGNDATAKEL 851 (1078)
Q Consensus 825 -----------------------------------------------------~~~lv~E~~~~g~L~~~l~~~~~~~~l 851 (1078)
..++||||+++|+|.+++.+.......
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~ 161 (332)
T 3qd2_B 82 QEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDR 161 (332)
T ss_dssp HHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGS
T ss_pred hhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccch
Confidence 379999999999999999877666677
Q ss_pred CHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccccccCCC------------CCceeecc
Q 039595 852 SWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVEPYS------------SNRTEFVG 919 (1078)
Q Consensus 852 ~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~~~~------------~~~~~~~g 919 (1078)
++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...... .......|
T Consensus 162 ~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~g 238 (332)
T 3qd2_B 162 EHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVG 238 (332)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-
T ss_pred hhHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCC
Confidence 8888999999999999999999 99999999999999999999999999998775432 12234579
Q ss_pred ccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCCCccHHHHHHHHHH
Q 039595 920 TFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSPGVMDKLISIMEV 999 (1078)
Q Consensus 920 t~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 999 (1078)
|+.|+|||++.+..++.++||||+||++|||++|..|+. . ..... ......... .........+.++
T Consensus 239 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~--~-----~~~~~---~~~~~~~~~---~~~~~~~~~~~~l 305 (332)
T 3qd2_B 239 TKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQM--E-----RVRII---TDVRNLKFP---LLFTQKYPQEHMM 305 (332)
T ss_dssp CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHH--H-----HHHHH---HHHHTTCCC---HHHHHHCHHHHHH
T ss_pred CcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChh--H-----HHHHH---HHhhccCCC---cccccCChhHHHH
Confidence 999999999999999999999999999999999987721 1 01111 111111111 1112233466889
Q ss_pred HHhcccCCCCCCCChhHHHHHhhhh
Q 039595 1000 AILCLDESPEARPTMEKGFGHHIGY 1024 (1078)
Q Consensus 1000 i~~cl~~dP~~RPt~~ell~h~~~~ 1024 (1078)
+.+||+.||++|||++|+++|+|+.
T Consensus 306 i~~~l~~~p~~Rps~~~~l~~~~f~ 330 (332)
T 3qd2_B 306 VQDMLSPSPTERPEATDIIENAIFE 330 (332)
T ss_dssp HHHHHCSSGGGSCCHHHHHHSTTCC
T ss_pred HHHHccCCCCcCCCHHHHhhchhhh
Confidence 9999999999999999999999974
No 74
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=6.6e-41 Score=377.07 Aligned_cols=258 Identities=24% Similarity=0.291 Sum_probs=207.0
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
.++|++.+.||+|+||+||+|... +++.||||++..... ....+.+.+|+.+++.++||||+++++++.+++..|+
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 82 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA---VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 82 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC----------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc---cchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 468999999999999999999665 799999999865432 2224568899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVE 908 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~ 908 (1078)
||||+++|+|.+++.. ...+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 83 v~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 156 (323)
T 3tki_A 83 FLEYCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFR 156 (323)
T ss_dssp EEECCTTEEGGGGSBT---TTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred EEEcCCCCcHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceec
Confidence 9999999999999943 34689999999999999999999999 99999999999999999999999999998664
Q ss_pred CCC--CCceeeccccccccccccccCCC-CccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCC
Q 039595 909 PYS--SNRTEFVGTFGYAAPEIAYTMRA-TEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTP 985 (1078)
Q Consensus 909 ~~~--~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 985 (1078)
... .......||+.|+|||++.+..+ +.++||||+||++|||++|+.||+.............. .......
T Consensus 157 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~------~~~~~~~ 230 (323)
T 3tki_A 157 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE------KKTYLNP 230 (323)
T ss_dssp ETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHT------TCTTSTT
T ss_pred cCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhc------ccccCCc
Confidence 322 22345679999999999987765 78999999999999999999998644332111111100 0111111
Q ss_pred CCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 986 SPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 986 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
.......+.+++.+||+.||++|||++|+++|+|+..
T Consensus 231 ---~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~ 267 (323)
T 3tki_A 231 ---WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 267 (323)
T ss_dssp ---GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTC
T ss_pred ---cccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhcc
Confidence 1112235678999999999999999999999999764
No 75
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=4.2e-41 Score=391.65 Aligned_cols=269 Identities=21% Similarity=0.232 Sum_probs=212.7
Q ss_pred HHHHHhhcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeec
Q 039595 744 EEIIKATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSN 822 (1078)
Q Consensus 744 ~~~~~~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 822 (1078)
.++....++|++.++||+|+||+||+|+.+ +++.||+|++.+..... ....+.+.+|+.++..++||||++++++|.+
T Consensus 67 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~-~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 67 KQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLK-RAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHH-TTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhh-HHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 344455789999999999999999999765 57899999997532211 1123347889999999999999999999999
Q ss_pred CCeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccc
Q 039595 823 ARHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFG 902 (1078)
Q Consensus 823 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 902 (1078)
++..|+||||+++|+|.+++.+. ...+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~~--~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFG 220 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSKF--EDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFG 220 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEecCCCCcHHHHHHHc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchh
Confidence 99999999999999999999542 35689999999999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCC-ceeeccccccccccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhh
Q 039595 903 IAKFVEPYSSN-RTEFVGTFGYAAPEIAY-----TMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQ 976 (1078)
Q Consensus 903 ~a~~~~~~~~~-~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~ 976 (1078)
+|+........ ....+||+.|+|||++. ...++.++|||||||++|||++|+.||.... .......+.....
T Consensus 221 la~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~--~~~~~~~i~~~~~ 298 (437)
T 4aw2_A 221 SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAES--LVETYGKIMNHKE 298 (437)
T ss_dssp TCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSS--HHHHHHHHHTHHH
T ss_pred hhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCC--hhHHHHhhhhccc
Confidence 99876543322 23468999999999987 4578999999999999999999999975332 1222222211111
Q ss_pred hcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCC--CCChhHHHHHhhhhh
Q 039595 977 ILDPRLSTPSPGVMDKLISIMEVAILCLDESPEA--RPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 977 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPt~~ell~h~~~~~ 1025 (1078)
. ..++....... .++.+++.+||..+|++ ||+++|+++|||+..
T Consensus 299 ~--~~~p~~~~~~s---~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~ 344 (437)
T 4aw2_A 299 R--FQFPTQVTDVS---ENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSG 344 (437)
T ss_dssp H--CCCCSSCCCSC---HHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTT
T ss_pred c--ccCCcccccCC---HHHHHHHHHHhcccccccCCCCHHHHhCCCccCC
Confidence 1 11111111112 25778899999888888 999999999999864
No 76
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=9.3e-41 Score=376.20 Aligned_cols=256 Identities=23% Similarity=0.290 Sum_probs=186.5
Q ss_pred cceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCC-CCceeeEEeeeecCCeeEEEEeec
Q 039595 756 KFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIR-HRNIVKFHGFCSNARHSFLVCEYL 833 (1078)
Q Consensus 756 ~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E~~ 833 (1078)
.+.||+|+||+||+|..+ +++.||||++... ....+.+|+.+++.+. ||||+++++++.++...|+||||+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~ 88 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-------MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELL 88 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh-------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEcc
Confidence 478999999999999664 7899999998643 2456788999999997 999999999999999999999999
Q ss_pred CCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCC---cEEEecccccccccCC
Q 039595 834 HRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEF---EAHVSDFGIAKFVEPY 910 (1078)
Q Consensus 834 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~---~~kl~DfG~a~~~~~~ 910 (1078)
++|+|.+++.. ...+++.++..++.||+.||+|||++ +|+||||||+||+++.++ .+||+|||+++.....
T Consensus 89 ~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 162 (325)
T 3kn6_A 89 NGGELFERIKK---KKHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD 162 (325)
T ss_dssp CSCBHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-
T ss_pred CCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCC
Confidence 99999999954 35689999999999999999999999 999999999999998766 8999999999876654
Q ss_pred CCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCCCccH
Q 039595 911 SSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSPGVM 990 (1078)
Q Consensus 911 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1078)
........||+.|+|||++.+..++.++||||+||++|||++|+.||......... .........+.............
T Consensus 163 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~ 241 (325)
T 3kn6_A 163 NQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTC-TSAVEIMKKIKKGDFSFEGEAWK 241 (325)
T ss_dssp ---------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------C-CCHHHHHHHHTTTCCCCCSHHHH
T ss_pred CCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCcccccc-ccHHHHHHHHHcCCCCCCccccc
Confidence 44456678899999999999999999999999999999999999998644322110 00111112222222222211111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 991 DKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 991 ~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
....++.+++.+||+.||++|||++|+++|+|+..
T Consensus 242 ~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~ 276 (325)
T 3kn6_A 242 NVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQD 276 (325)
T ss_dssp TSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCT
T ss_pred CCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhcc
Confidence 22346789999999999999999999999999864
No 77
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.5e-40 Score=378.76 Aligned_cols=261 Identities=22% Similarity=0.287 Sum_probs=211.5
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
.++|++.+.||+|+||.||+|..+ +++.||+|++.+.... .....+.+.+|+.+++.++||||+++++++.+....|+
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~-~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 92 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCV-ERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFM 92 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcc-cHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 468999999999999999999654 6899999999754322 22345678899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVE 908 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~ 908 (1078)
||||+.+|+|.+++.. ...+++..+..++.||+.||+|||++ ||+||||||+||+++.+|.+||+|||+++...
T Consensus 93 v~e~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 166 (384)
T 4fr4_A 93 VVDLLLGGDLRYHLQQ---NVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLP 166 (384)
T ss_dssp EECCCTTEEHHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeecc
Confidence 9999999999999954 35689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCceeecccccccccccccc---CCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCC
Q 039595 909 PYSSNRTEFVGTFGYAAPEIAYT---MRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTP 985 (1078)
Q Consensus 909 ~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 985 (1078)
. .......+||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... .......... ....++.
T Consensus 167 ~-~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~--~~~~~~~~~~-~~~~~p~- 241 (384)
T 4fr4_A 167 R-ETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS--SKEIVHTFET-TVVTYPS- 241 (384)
T ss_dssp T-TCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC--HHHHHHHHHH-CCCCCCT-
T ss_pred C-CCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc--HHHHHHHHhh-cccCCCC-
Confidence 3 233456789999999999874 458999999999999999999999976433221 1111111111 1111111
Q ss_pred CCccHHHHHHHHHHHHhcccCCCCCCCC-hhHHHHHhhhhhhH
Q 039595 986 SPGVMDKLISIMEVAILCLDESPEARPT-MEKGFGHHIGYCDE 1027 (1078)
Q Consensus 986 ~~~~~~~~~~l~~li~~cl~~dP~~RPt-~~ell~h~~~~~~~ 1027 (1078)
.. ...+.+++.+||+.||++||+ ++++.+|+|+..-.
T Consensus 242 --~~---s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~~ 279 (384)
T 4fr4_A 242 --AW---SQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDIN 279 (384)
T ss_dssp --TS---CHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTTCC
T ss_pred --cC---CHHHHHHHHHHhcCCHhHhcccHHHHHcChhhhcCC
Confidence 11 135788999999999999998 99999999987543
No 78
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.3e-40 Score=377.95 Aligned_cols=258 Identities=22% Similarity=0.273 Sum_probs=211.4
Q ss_pred hhcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcC-CCCceeeEEeeeecCCee
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEI-RHRNIVKFHGFCSNARHS 826 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 826 (1078)
..++|++.+.||+|+||+||+|+.+ +|+.||||++.+.... .....+.+..|..++..+ +||+|+++++++.+.+..
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~-~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~ 96 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVI-QDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 96 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHH-HTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-cchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEE
Confidence 4578999999999999999999765 5889999999765322 123456678899999888 899999999999999999
Q ss_pred EEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccc
Q 039595 827 FLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKF 906 (1078)
Q Consensus 827 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~ 906 (1078)
|+||||++||+|.+++.. .+.+++.+++.++.||+.||+|||++ +|+||||||+||+++.+|.+||+|||+++.
T Consensus 97 ~lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~ 170 (353)
T 2i0e_A 97 YFVMEYVNGGDLMYHIQQ---VGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE 170 (353)
T ss_dssp EEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccc
Confidence 999999999999999943 34689999999999999999999999 999999999999999999999999999986
Q ss_pred ccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCC
Q 039595 907 VEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPS 986 (1078)
Q Consensus 907 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 986 (1078)
...........+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+... ...++.
T Consensus 171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--~~~~~~i~~~----~~~~p~-- 242 (353)
T 2i0e_A 171 NIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--DELFQSIMEH----NVAYPK-- 242 (353)
T ss_dssp CCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHC----CCCCCT--
T ss_pred cccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH--HHHHHHHHhC----CCCCCC--
Confidence 54444445667899999999999999999999999999999999999999753321 1222211111 111111
Q ss_pred CccHHHHHHHHHHHHhcccCCCCCCCC-----hhHHHHHhhhhh
Q 039595 987 PGVMDKLISIMEVAILCLDESPEARPT-----MEKGFGHHIGYC 1025 (1078)
Q Consensus 987 ~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~ell~h~~~~~ 1025 (1078)
.. ..++.+++.+||..||++||+ ++|+++|+|+..
T Consensus 243 -~~---s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~ 282 (353)
T 2i0e_A 243 -SM---SKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY 282 (353)
T ss_dssp -TS---CHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTT
T ss_pred -CC---CHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccC
Confidence 11 135778999999999999995 699999999864
No 79
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=4.4e-40 Score=378.16 Aligned_cols=258 Identities=21% Similarity=0.260 Sum_probs=210.3
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
.++|++.+.||+|+||+||+|..+ +|+.||+|++.... ..+...+.+|+.++++++||||+++++++.++...++
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~----~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 125 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY----PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVL 125 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc----hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEE
Confidence 468999999999999999999664 78999999986542 3345678999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCC--CCcEEEeccccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDL--EFEAHVSDFGIAKF 906 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~--~~~~kl~DfG~a~~ 906 (1078)
||||+++|+|.+++... ...+++.+++.++.||+.||+|||++ +|+||||||+||+++. ++.+||+|||+++.
T Consensus 126 v~E~~~gg~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~ 200 (387)
T 1kob_A 126 ILEFLSGGELFDRIAAE--DYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATK 200 (387)
T ss_dssp EEECCCCCBHHHHTTCT--TCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEE
T ss_pred EEEcCCCCcHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEeccccee
Confidence 99999999999999432 34689999999999999999999999 9999999999999974 47899999999987
Q ss_pred ccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCC
Q 039595 907 VEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPS 986 (1078)
Q Consensus 907 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 986 (1078)
.... .......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......++..
T Consensus 201 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~--~~~~~~i~~~~~~~~~~~---- 273 (387)
T 1kob_A 201 LNPD-EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD--LETLQNVKRCDWEFDEDA---- 273 (387)
T ss_dssp CCTT-SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHHHHHCCCCCCSST----
T ss_pred cCCC-cceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH--HHHHHHHHhCCCCCCccc----
Confidence 6543 234456899999999999999999999999999999999999999753321 111111111111111111
Q ss_pred CccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 987 PGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 987 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
......++.+++.+||+.||++|||++|+++|+|+..
T Consensus 274 --~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 310 (387)
T 1kob_A 274 --FSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKG 310 (387)
T ss_dssp --TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSS
T ss_pred --cccCCHHHHHHHHHHcCCChhHCcCHHHHhhCccccC
Confidence 1111236788999999999999999999999999863
No 80
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1e-39 Score=367.35 Aligned_cols=269 Identities=21% Similarity=0.283 Sum_probs=212.0
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCC--ee
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNAR--HS 826 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~ 826 (1078)
.++|++.+.||+|+||+||+|... +++.||||++..... ....+.+.+|+.++++++||||+++++++.... ..
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 84 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF---LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHK 84 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG---GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc---cchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceE
Confidence 367999999999999999999765 589999999975432 233567889999999999999999999987654 78
Q ss_pred EEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeee----CCCCcEEEeccc
Q 039595 827 FLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLL----DLEFEAHVSDFG 902 (1078)
Q Consensus 827 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll----~~~~~~kl~DfG 902 (1078)
++||||+++|+|.+++........+++.+++.++.||+.||+|||++ +|+||||||+||++ +.++.+||+|||
T Consensus 85 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg 161 (319)
T 4euu_A 85 VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161 (319)
T ss_dssp EEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCT
T ss_pred EEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCC
Confidence 99999999999999997655555599999999999999999999999 99999999999999 788889999999
Q ss_pred ccccccCCCCCceeeccccccccccccc--------cCCCCccchhHHHHHHHHHHHhCCCCCCcccccc--cchhhhhh
Q 039595 903 IAKFVEPYSSNRTEFVGTFGYAAPEIAY--------TMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINF--SSFSNMII 972 (1078)
Q Consensus 903 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~--~~~~~~~~ 972 (1078)
+++...... ......||+.|+|||++. +..++.++|||||||++|||++|+.||....... ......+.
T Consensus 162 ~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 240 (319)
T 4euu_A 162 AARELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII 240 (319)
T ss_dssp TCEECCTTC-CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHH
T ss_pred CceecCCCC-ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHh
Confidence 998765432 334567999999999986 5678999999999999999999999975332211 11111111
Q ss_pred hhh---------------hhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 973 EVN---------------QILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 973 ~~~---------------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
... ..+.+...............+.+++.+||+.||++|||++|+++|+-...
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp HHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred cCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 000 00011222222223444557889999999999999999999999986443
No 81
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.2e-39 Score=367.04 Aligned_cols=270 Identities=34% Similarity=0.527 Sum_probs=218.4
Q ss_pred HHHHhhcCCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCC
Q 039595 745 EIIKATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNAR 824 (1078)
Q Consensus 745 ~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 824 (1078)
++..+.++|+..+.||+|+||.||+|..++++.||||++... .....+.+.+|+.++++++||||+++++++.+++
T Consensus 33 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPE----SSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp CCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSC----CSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred HHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEeccc----ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 344567899999999999999999999888999999998654 2334677899999999999999999999999999
Q ss_pred eeEEEEeecCCCCHHHHhcCCC-CCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccc
Q 039595 825 HSFLVCEYLHRGSLARILGNDA-TAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGI 903 (1078)
Q Consensus 825 ~~~lv~E~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~ 903 (1078)
..++||||+++|+|.+++.... ....+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 185 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGI 185 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTT
T ss_pred eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeeccc
Confidence 9999999999999999995433 234689999999999999999999999 999999999999999999999999999
Q ss_pred cccccCCC--CCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccc-cchhhhh------hhh
Q 039595 904 AKFVEPYS--SNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINF-SSFSNMI------IEV 974 (1078)
Q Consensus 904 a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~-~~~~~~~------~~~ 974 (1078)
++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....... ...
T Consensus 186 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (321)
T 2qkw_B 186 SKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265 (321)
T ss_dssp CEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCC
T ss_pred ccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccH
Confidence 98654322 22344568999999999999999999999999999999999999975432211 1111100 011
Q ss_pred hhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhh
Q 039595 975 NQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIG 1023 (1078)
Q Consensus 975 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~ 1023 (1078)
....++..... ........+.+++.+||+.||++|||++|+++++..
T Consensus 266 ~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 312 (321)
T 2qkw_B 266 EQIVDPNLADK--IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEY 312 (321)
T ss_dssp CSSSSSSCTTC--SCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHhcChhhccc--cCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 12222322222 234556688999999999999999999999988763
No 82
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=2.6e-40 Score=375.62 Aligned_cols=257 Identities=22% Similarity=0.253 Sum_probs=212.1
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
.++|++.+.||+|+||.||+|+.+ +|+.||||++.+.... .....+.+.+|+.+++.++||||+++++++.+....|+
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 118 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVV-KLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM 118 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhc-cHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEE
Confidence 468999999999999999999765 7999999999764322 12345678899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVE 908 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~ 908 (1078)
||||+++|+|.+++.+ .+.+++.+++.++.||+.||+|||++ +|+||||||+||+++.+|.+||+|||+++...
T Consensus 119 v~e~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~ 192 (350)
T 1rdq_E 119 VMEYVAGGEMFSHLRR---IGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192 (350)
T ss_dssp EEECCTTCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEcCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceecc
Confidence 9999999999999953 34689999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCCCc
Q 039595 909 PYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSPG 988 (1078)
Q Consensus 909 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1078)
. .....+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+... ...++. .
T Consensus 193 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~i~~~----~~~~p~---~ 260 (350)
T 1rdq_E 193 G---RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP--IQIYEKIVSG----KVRFPS---H 260 (350)
T ss_dssp S---CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHC----CCCCCT---T
T ss_pred C---CcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH--HHHHHHHHcC----CCCCCC---C
Confidence 3 23456899999999999999999999999999999999999999753221 1111111111 111111 1
Q ss_pred cHHHHHHHHHHHHhcccCCCCCCCC-----hhHHHHHhhhhhhHH
Q 039595 989 VMDKLISIMEVAILCLDESPEARPT-----MEKGFGHHIGYCDEI 1028 (1078)
Q Consensus 989 ~~~~~~~l~~li~~cl~~dP~~RPt-----~~ell~h~~~~~~~~ 1028 (1078)
. ...+.+++.+||+.||++||+ ++|+++|+|+..-+-
T Consensus 261 ~---~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~~w 302 (350)
T 1rdq_E 261 F---SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW 302 (350)
T ss_dssp C---CHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTCCH
T ss_pred C---CHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCCCCH
Confidence 1 235778999999999999998 999999999875443
No 83
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=364.22 Aligned_cols=254 Identities=26% Similarity=0.426 Sum_probs=206.4
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
.++|+..+.||+|+||+||+|... +++.||+|++... .....+.+.+|+.++++++||||+++++++.+++..++
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~----~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 84 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF----DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNF 84 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC----CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC----CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEE
Confidence 367899999999999999999764 6899999998543 35567789999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVE 908 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~ 908 (1078)
||||+++|+|.++++.. ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.++...
T Consensus 85 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 159 (310)
T 3s95_A 85 ITEYIKGGTLRGIIKSM--DSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMV 159 (310)
T ss_dssp EEECCTTCBHHHHHHHC--CTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC
T ss_pred EEEecCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecc
Confidence 99999999999999542 35689999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCc--------------eeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhh-h
Q 039595 909 PYSSNR--------------TEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMII-E 973 (1078)
Q Consensus 909 ~~~~~~--------------~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~-~ 973 (1078)
...... ....||+.|+|||++.+..++.++||||||+++|||++|..||............... .
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~ 239 (310)
T 3s95_A 160 DEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGF 239 (310)
T ss_dssp --------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHH
T ss_pred cccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcc
Confidence 322211 1457999999999999999999999999999999999999997644332211111111 1
Q ss_pred hhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhh
Q 039595 974 VNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHI 1022 (1078)
Q Consensus 974 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~ 1022 (1078)
.....++..+ ..+.+++.+||+.||++|||++|+++..-
T Consensus 240 ~~~~~~~~~~----------~~l~~li~~~l~~dP~~Rps~~~l~~~L~ 278 (310)
T 3s95_A 240 LDRYCPPNCP----------PSFFPITVRCCDLDPEKRPSFVKLEHWLE 278 (310)
T ss_dssp HHHTCCTTCC----------TTHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ccccCCCCCC----------HHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1111122111 14678899999999999999999988544
No 84
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=4.2e-40 Score=374.55 Aligned_cols=257 Identities=23% Similarity=0.294 Sum_probs=194.1
Q ss_pred hhcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeE
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSF 827 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 827 (1078)
..++|++.+.||+|+||+||+|..+ +++.||||++.... ..+.+.+|+.++++++||||+++++++.++...+
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 124 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV------DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEIS 124 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------------CHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch------hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEE
Confidence 4567999999999999999999765 68899999987542 3456788999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCC---CCcEEEeccccc
Q 039595 828 LVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDL---EFEAHVSDFGIA 904 (1078)
Q Consensus 828 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~kl~DfG~a 904 (1078)
+||||+++|+|.+++.. ...+++.+++.++.||+.||+|||+. +|+||||||+||+++. ++.+||+|||++
T Consensus 125 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a 198 (349)
T 2w4o_A 125 LVLELVTGGELFDRIVE---KGYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLS 198 (349)
T ss_dssp EEECCCCSCBHHHHHTT---CSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC--
T ss_pred EEEEeCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccc
Confidence 99999999999999943 35689999999999999999999999 9999999999999975 889999999999
Q ss_pred ccccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCC
Q 039595 905 KFVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLST 984 (1078)
Q Consensus 905 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 984 (1078)
+..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ .. ..+.......
T Consensus 199 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~------~~i~~~~~~~ 270 (349)
T 2w4o_A 199 KIVEHQ-VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQF-MF------RRILNCEYYF 270 (349)
T ss_dssp ---------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHH-HH------HHHHTTCCCC
T ss_pred cccCcc-cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHH-HH------HHHHhCCCcc
Confidence 866432 223456799999999999999999999999999999999999999753322110 11 1111111111
Q ss_pred CCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 985 PSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 985 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
..+........+.+++.+||+.||++|||++|+++|+|+..
T Consensus 271 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~ 311 (349)
T 2w4o_A 271 ISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTG 311 (349)
T ss_dssp CTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTS
T ss_pred CCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcccCC
Confidence 11111122236788999999999999999999999999863
No 85
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=5.5e-40 Score=368.95 Aligned_cols=267 Identities=20% Similarity=0.293 Sum_probs=196.0
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
.++|++.+.||+|+||+||+|..+ +|+.||+|++.... .....+.+.+|+.++++++||||+++++++.+++..++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 80 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS---EEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTL 80 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCS---TTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccc---ccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEE
Confidence 468999999999999999999664 68999999997543 22234568899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhcCC---CCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccc
Q 039595 829 VCEYLHRGSLARILGND---ATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAK 905 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~---~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~ 905 (1078)
||||++ |+|.+++... .....+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||.++
T Consensus 81 v~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~ 156 (317)
T 2pmi_A 81 VFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLAR 156 (317)
T ss_dssp EEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCE
T ss_pred EEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccce
Confidence 999998 5999988432 1224589999999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCCCceeecccccccccccccc-CCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhh---------
Q 039595 906 FVEPYSSNRTEFVGTFGYAAPEIAYT-MRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVN--------- 975 (1078)
Q Consensus 906 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~--------- 975 (1078)
.............||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .....+....
T Consensus 157 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~ 234 (317)
T 2pmi_A 157 AFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE--EQLKLIFDIMGTPNESLWP 234 (317)
T ss_dssp ETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCSCCTTTCG
T ss_pred ecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHhCCCChhHhh
Confidence 77554444456689999999999876 46899999999999999999999997643321 1111110000
Q ss_pred -----hhcCCCCCCCCC-ccH---------HHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 976 -----QILDPRLSTPSP-GVM---------DKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 976 -----~~~~~~~~~~~~-~~~---------~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
....+......+ ... ....++.+++.+||+.||++|||++|+++|||+..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~ 299 (317)
T 2pmi_A 235 SVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAE 299 (317)
T ss_dssp GGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGG
T ss_pred hhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhc
Confidence 000011110000 000 11236789999999999999999999999999765
No 86
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3e-40 Score=376.20 Aligned_cols=268 Identities=24% Similarity=0.274 Sum_probs=209.3
Q ss_pred HHHhhcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccC-ChhhHHHHHHHHHHHhcCCCCceeeEEeeeecC
Q 039595 746 IIKATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSG-NMADQDEFLNVVLALNEIRHRNIVKFHGFCSNA 823 (1078)
Q Consensus 746 ~~~~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 823 (1078)
+....++|++.+.||+|+||+||+|.. .+++.||+|++....... .....+.+.+|+.++++++||||+++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 456778899999999999999999965 478899999987643221 234567899999999999999999999999999
Q ss_pred CeeEEEEeecCCCCHHHHhcCCC-------------------------------------CCCcCCHHHHHHHHHHHHHH
Q 039595 824 RHSFLVCEYLHRGSLARILGNDA-------------------------------------TAKELSWNRRINVIKGVANA 866 (1078)
Q Consensus 824 ~~~~lv~E~~~~g~L~~~l~~~~-------------------------------------~~~~l~~~~~~~i~~~i~~~ 866 (1078)
+..++||||+++|+|.+++.... ....+++..++.++.||+.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 99999999999999999984210 01234677888999999999
Q ss_pred HHHHHhcCCCCcEecCCCCCCeeeCCCC--cEEEecccccccccCCCC----Cceeecccccccccccccc--CCCCccc
Q 039595 867 LSYLHHDCLPSIIHRDISSKNVLLDLEF--EAHVSDFGIAKFVEPYSS----NRTEFVGTFGYAAPEIAYT--MRATEKY 938 (1078)
Q Consensus 867 L~~LH~~~~~~ivH~Dlk~~NIll~~~~--~~kl~DfG~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~s 938 (1078)
|+|||++ +|+||||||+||+++.++ .+||+|||+++.+..... ......||+.|+|||++.+ ..++.++
T Consensus 181 l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 9999999 999999999999998776 899999999987643222 2345679999999999875 6789999
Q ss_pred hhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHH
Q 039595 939 DVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGF 1018 (1078)
Q Consensus 939 DvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell 1018 (1078)
|||||||++|||++|+.||...... . ....+.........+........+.+++.+||+.||++|||++|++
T Consensus 258 DiwslG~il~el~~g~~pf~~~~~~--~------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l 329 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPGVNDA--D------TISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRAL 329 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHH--H------HHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCChH--H------HHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHh
Confidence 9999999999999999997533221 1 1111122222222222222234678899999999999999999999
Q ss_pred HHhhhh
Q 039595 1019 GHHIGY 1024 (1078)
Q Consensus 1019 ~h~~~~ 1024 (1078)
+|+|+.
T Consensus 330 ~hp~~~ 335 (345)
T 3hko_A 330 QHPWIS 335 (345)
T ss_dssp HSHHHH
T ss_pred cChhhc
Confidence 999965
No 87
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.2e-40 Score=384.97 Aligned_cols=265 Identities=20% Similarity=0.243 Sum_probs=211.0
Q ss_pred HHHHhhcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecC
Q 039595 745 EIIKATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNA 823 (1078)
Q Consensus 745 ~~~~~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 823 (1078)
++....++|++.+.||+|+||+||+|+.+ +++.||+|++.+..... ....+.+.+|+.+++.++||||+++++++.++
T Consensus 63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~-~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIK-RSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH-TCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhh-hHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 44445689999999999999999999765 68999999997532211 11233578899999999999999999999999
Q ss_pred CeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccc
Q 039595 824 RHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGI 903 (1078)
Q Consensus 824 ~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~ 903 (1078)
...|+||||++||+|.++++. ..+++..+..++.||+.||+|||++ +|+||||||+|||++.+|.+||+|||+
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~----~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~ 214 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGT 214 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEeCCCCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccce
Confidence 999999999999999999943 3589999999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCC-CceeeccccccccccccccCC----CCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhc
Q 039595 904 AKFVEPYSS-NRTEFVGTFGYAAPEIAYTMR----ATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQIL 978 (1078)
Q Consensus 904 a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 978 (1078)
|+....... .....+||+.|+|||++.+.. ++.++|||||||++|||++|+.||...+ .......+.......
T Consensus 215 a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~--~~~~~~~i~~~~~~~ 292 (410)
T 3v8s_A 215 CMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS--LVGTYSKIMNHKNSL 292 (410)
T ss_dssp CEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSS--HHHHHHHHHTHHHHC
T ss_pred eEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCC--hhhHHHHHHhccccc
Confidence 987654322 223568999999999998765 7899999999999999999999975322 222222222111111
Q ss_pred CCCCCCCCCccHHHHHHHHHHHHhcccCCCCC--CCChhHHHHHhhhhh
Q 039595 979 DPRLSTPSPGVMDKLISIMEVAILCLDESPEA--RPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 979 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPt~~ell~h~~~~~ 1025 (1078)
.++.. .... .++.+++.+||..+|.+ ||+++|+++|+|+..
T Consensus 293 --~~p~~-~~~s---~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~ 335 (410)
T 3v8s_A 293 --TFPDD-NDIS---KEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKN 335 (410)
T ss_dssp --CCCTT-CCCC---HHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCC
T ss_pred --cCCCc-cccc---HHHHHHHHHHccChhhhCCCCCHHHHhcCccccC
Confidence 11110 1111 25778899999999988 999999999999864
No 88
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=2.4e-40 Score=378.36 Aligned_cols=258 Identities=23% Similarity=0.276 Sum_probs=203.1
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHH-HhcCCCCceeeEEeeeecCCeeE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLA-LNEIRHRNIVKFHGFCSNARHSF 827 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~ 827 (1078)
.++|++.+.||+|+||+||+|+.+ +++.||||++.+..... ......+..|..+ ++.++||||+++++++.+.+..|
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~-~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~ 115 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILK-KKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLY 115 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC--------------CCBCCCCCTTBCCEEEEEECSSEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhh-hHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEE
Confidence 468999999999999999999765 68899999997764332 2234455666665 57789999999999999999999
Q ss_pred EEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccccc
Q 039595 828 LVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFV 907 (1078)
Q Consensus 828 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~ 907 (1078)
+||||++||+|.+++.+ ...+++..++.++.||+.||+|||++ +|+||||||+||+++.+|.+||+|||+++..
T Consensus 116 lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~ 189 (373)
T 2r5t_A 116 FVLDYINGGELFYHLQR---ERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKEN 189 (373)
T ss_dssp EEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGG
T ss_pred EEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCcccccc
Confidence 99999999999999943 34688999999999999999999999 9999999999999999999999999999875
Q ss_pred cCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCCC
Q 039595 908 EPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSP 987 (1078)
Q Consensus 908 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 987 (1078)
..........+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+. ......+ +
T Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--~~~~~~i~------~~~~~~~-~ 260 (373)
T 2r5t_A 190 IEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT--AEMYDNIL------NKPLQLK-P 260 (373)
T ss_dssp BCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH--HHHHHHHH------HSCCCCC-S
T ss_pred ccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH--HHHHHHHH------hcccCCC-C
Confidence 4444455667899999999999999999999999999999999999999753221 11111111 1111111 1
Q ss_pred ccHHHHHHHHHHHHhcccCCCCCCCCh----hHHHHHhhhhhh
Q 039595 988 GVMDKLISIMEVAILCLDESPEARPTM----EKGFGHHIGYCD 1026 (1078)
Q Consensus 988 ~~~~~~~~l~~li~~cl~~dP~~RPt~----~ell~h~~~~~~ 1026 (1078)
... ..+.+++.+||+.||++||++ +|+++|+|+..-
T Consensus 261 ~~~---~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~ 300 (373)
T 2r5t_A 261 NIT---NSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLI 300 (373)
T ss_dssp SSC---HHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTC
T ss_pred CCC---HHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccCC
Confidence 111 257789999999999999997 699999998653
No 89
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=5e-40 Score=376.92 Aligned_cols=261 Identities=21% Similarity=0.253 Sum_probs=205.2
Q ss_pred CccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEEEEee
Q 039595 754 DEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFLVCEY 832 (1078)
Q Consensus 754 ~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~ 832 (1078)
...+.||+|+||.||+|.. .+|+.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~ 167 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG----MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEY 167 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc----cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeC
Confidence 3356899999999999965 479999999987642 34567899999999999999999999999999999999999
Q ss_pred cCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeee--CCCCcEEEecccccccccCC
Q 039595 833 LHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLL--DLEFEAHVSDFGIAKFVEPY 910 (1078)
Q Consensus 833 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll--~~~~~~kl~DfG~a~~~~~~ 910 (1078)
+++|+|.+++... ...+++.+++.++.||+.||+|||+. +|+||||||+||++ +.++.+||+|||+++.....
T Consensus 168 ~~~~~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~ 242 (373)
T 2x4f_A 168 VDGGELFDRIIDE--SYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR 242 (373)
T ss_dssp CTTCEEHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTT
T ss_pred CCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCc
Confidence 9999999988432 34689999999999999999999999 99999999999999 66789999999999876543
Q ss_pred CCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCCCccH
Q 039595 911 SSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSPGVM 990 (1078)
Q Consensus 911 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 990 (1078)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..... .+.............
T Consensus 243 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~--~~~~~------~i~~~~~~~~~~~~~ 313 (373)
T 2x4f_A 243 E-KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND--AETLN------NILACRWDLEDEEFQ 313 (373)
T ss_dssp C-BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHH------HHHHTCCCSCSGGGT
T ss_pred c-ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH--HHHHH------HHHhccCCCChhhhc
Confidence 2 23445799999999999999999999999999999999999999753322 11111 111111111111111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhhhHHHHHH
Q 039595 991 DKLISIMEVAILCLDESPEARPTMEKGFGHHIGYCDEILAVI 1032 (1078)
Q Consensus 991 ~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~~~~~~~~ 1032 (1078)
.....+.+++.+||+.||++|||++|+++|||+...+.....
T Consensus 314 ~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~~~~~~~ 355 (373)
T 2x4f_A 314 DISEEAKEFISKLLIKEKSWRISASEALKHPWLSDHKLHSRL 355 (373)
T ss_dssp TSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCHHHHHHH
T ss_pred cCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCCchhhhh
Confidence 122367899999999999999999999999998876655443
No 90
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=6.4e-40 Score=374.68 Aligned_cols=258 Identities=25% Similarity=0.290 Sum_probs=197.8
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
.++|++.+.||+|+||+||+|... +++.||||++.... ...+.+.+|+.++++++||||+++++++.+++..++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 93 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-----AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAI 93 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-----TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-----cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEE
Confidence 468999999999999999999765 79999999996542 223567899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCc--EEEeccccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFE--AHVSDFGIAKF 906 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~--~kl~DfG~a~~ 906 (1078)
||||+++|+|.+++.. .+.+++.+++.++.|++.||+|||++ +|+||||||+||+++.++. +||+|||+++.
T Consensus 94 v~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~ 167 (361)
T 3uc3_A 94 IMEYASGGELYERICN---AGRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKS 167 (361)
T ss_dssp EEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC--
T ss_pred EEEeCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccc
Confidence 9999999999999843 34689999999999999999999999 9999999999999987765 99999999975
Q ss_pred ccCCCCCceeeccccccccccccccCCCCcc-chhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCC
Q 039595 907 VEPYSSNRTEFVGTFGYAAPEIAYTMRATEK-YDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTP 985 (1078)
Q Consensus 907 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 985 (1078)
... ........||+.|+|||++.+..++.+ +||||+||++|||++|+.||....... ...... ..+.......+
T Consensus 168 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~~~---~~~~~~~~~~~ 242 (361)
T 3uc3_A 168 SVL-HSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR-DYRKTI---QRILSVKYSIP 242 (361)
T ss_dssp --------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC-CHHHHH---HHHHTTCCCCC
T ss_pred ccc-cCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH-HHHHHH---HHHhcCCCCCC
Confidence 432 223345679999999999988887655 899999999999999999976433211 111111 11222221111
Q ss_pred CCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 986 SPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 986 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
... .....+.+++.+||..||++|||++|+++|+|+..
T Consensus 243 ~~~--~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~ 280 (361)
T 3uc3_A 243 DDI--RISPECCHLISRIFVADPATRISIPEIKTHSWFLK 280 (361)
T ss_dssp TTS--CCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHT
T ss_pred CcC--CCCHHHHHHHHHHccCChhHCcCHHHHHhCcchhc
Confidence 110 11135778999999999999999999999999854
No 91
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.8e-40 Score=373.74 Aligned_cols=257 Identities=23% Similarity=0.352 Sum_probs=204.2
Q ss_pred hcCCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCC--CceeeEEeeeecCCeeE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRH--RNIVKFHGFCSNARHSF 827 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~ 827 (1078)
.++|++.+.||+|+||.||+|...+++.||||++.... ......+.+.+|+.++++++| |||+++++++.++...+
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~ 85 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE--ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 85 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTT--CCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccc--cchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEE
Confidence 46799999999999999999988889999999987543 234456778999999999986 99999999999999999
Q ss_pred EEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccccc
Q 039595 828 LVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFV 907 (1078)
Q Consensus 828 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~ 907 (1078)
+|||| .+|+|.+++.. ...+++.++..++.||+.||+|||++ +|+||||||+||+++ ++.+||+|||+++..
T Consensus 86 lv~e~-~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~ 157 (343)
T 3dbq_A 86 MVMEC-GNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQM 157 (343)
T ss_dssp EEECC-CSEEHHHHHHH---SCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC
T ss_pred EEEeC-CCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeeccccccc
Confidence 99995 57799999954 35689999999999999999999999 999999999999996 688999999999876
Q ss_pred cCCCC--Cceeecccccccccccccc-----------CCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhh
Q 039595 908 EPYSS--NRTEFVGTFGYAAPEIAYT-----------MRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEV 974 (1078)
Q Consensus 908 ~~~~~--~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~ 974 (1078)
..... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... .....
T Consensus 158 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-------~~~~~ 230 (343)
T 3dbq_A 158 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-------QISKL 230 (343)
T ss_dssp ------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS-------HHHHH
T ss_pred CcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh-------HHHHH
Confidence 54322 2345679999999999865 6789999999999999999999999753222 11222
Q ss_pred hhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 975 NQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 975 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
....++......+.... ..+.+++.+||+.||++|||++|+++|+|+..
T Consensus 231 ~~~~~~~~~~~~~~~~~--~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~ 279 (343)
T 3dbq_A 231 HAIIDPNHEIEFPDIPE--KDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 279 (343)
T ss_dssp HHHHCTTSCCCCCCCSC--HHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHS
T ss_pred HHHhcCCcccCCcccCC--HHHHHHHHHHcCCChhHCCCHHHHHhCccccc
Confidence 23333332222222211 25778999999999999999999999999874
No 92
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.6e-40 Score=376.22 Aligned_cols=257 Identities=20% Similarity=0.218 Sum_probs=205.4
Q ss_pred hhcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcC-CCCceeeEEeeeecCCee
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEI-RHRNIVKFHGFCSNARHS 826 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 826 (1078)
..++|++.+.||+|+||+||+|..+ +|+.||||++.+... ...+|++++.++ +||||+++++++.++...
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~ 91 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR--------DPTEEIEILLRYGQHPNIITLKDVYDDGKYV 91 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC--------CCHHHHHHHHHHTTSTTBCCEEEEEECSSEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC--------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEE
Confidence 4578999999999999999999665 688999999976431 134577777777 799999999999999999
Q ss_pred EEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCC----CcEEEeccc
Q 039595 827 FLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLE----FEAHVSDFG 902 (1078)
Q Consensus 827 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~----~~~kl~DfG 902 (1078)
|+||||+++|+|.+++.+ .+.+++.++..++.||+.||+|||++ ||+||||||+||++..+ +.+||+|||
T Consensus 92 ~lv~E~~~gg~L~~~i~~---~~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg 165 (342)
T 2qr7_A 92 YVVTELMKGGELLDKILR---QKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFG 165 (342)
T ss_dssp EEEECCCCSCBHHHHHHT---CTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCT
T ss_pred EEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECC
Confidence 999999999999999954 34689999999999999999999999 99999999999998543 359999999
Q ss_pred ccccccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccc-ccchhhhhhhhhhhcCCC
Q 039595 903 IAKFVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSIN-FSSFSNMIIEVNQILDPR 981 (1078)
Q Consensus 903 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~-~~~~~~~~~~~~~~~~~~ 981 (1078)
+++............+||+.|+|||++.+..++.++||||+||++|||++|+.||...... .......+.. ..
T Consensus 166 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~------~~ 239 (342)
T 2qr7_A 166 FAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGS------GK 239 (342)
T ss_dssp TCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHH------CC
T ss_pred CcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHcc------CC
Confidence 9997765544555678999999999999888999999999999999999999997643221 1111111111 11
Q ss_pred CCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 982 LSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 982 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
+.............+.+++.+||+.||++|||++|+++|+|+..
T Consensus 240 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~ 283 (342)
T 2qr7_A 240 FSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVH 283 (342)
T ss_dssp CCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHT
T ss_pred cccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecC
Confidence 11111111111235778999999999999999999999999854
No 93
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=8.4e-40 Score=384.59 Aligned_cols=256 Identities=24% Similarity=0.334 Sum_probs=210.5
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
.++|++.+.||+|+||.||+|... +|+.||||++...... .....+.+.+|+.+++.++||||+++++++...+..|+
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~-~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~l 93 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIR-SLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFM 93 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHH-HTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhcc-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 367999999999999999999765 7999999999754321 12235678999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVE 908 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~ 908 (1078)
||||+++|+|.+++.. .+.+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 94 v~E~~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~ 167 (476)
T 2y94_A 94 VMEYVSGGELFDYICK---NGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 167 (476)
T ss_dssp EEECCSSEEHHHHTTS---SSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred EEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhcc
Confidence 9999999999999943 45699999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCceeeccccccccccccccCCC-CccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCCC
Q 039595 909 PYSSNRTEFVGTFGYAAPEIAYTMRA-TEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSP 987 (1078)
Q Consensus 909 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 987 (1078)
.. ......+||+.|+|||++.+..+ +.++||||+||++|||++|+.||+.... ...... +.+.....+ .
T Consensus 168 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~--~~~~~~------i~~~~~~~p-~ 237 (476)
T 2y94_A 168 DG-EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV--PTLFKK------ICDGIFYTP-Q 237 (476)
T ss_dssp TT-CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS--HHHHHH------HHTTCCCCC-T
T ss_pred cc-ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH--HHHHHH------HhcCCcCCC-c
Confidence 42 23445689999999999988765 7899999999999999999999763321 111111 111111111 1
Q ss_pred ccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 988 GVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 988 ~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
... .++.+++.+||..||++|||++|+++|+|+..
T Consensus 238 ~~s---~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~ 272 (476)
T 2y94_A 238 YLN---PSVISLLKHMLQVDPMKRATIKDIREHEWFKQ 272 (476)
T ss_dssp TCC---HHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHT
T ss_pred cCC---HHHHHHHHHHcCCCchhCcCHHHHHhCHHhhh
Confidence 111 25778999999999999999999999999753
No 94
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=2.2e-40 Score=390.29 Aligned_cols=258 Identities=21% Similarity=0.262 Sum_probs=202.1
Q ss_pred hcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
.++|++.+.||+|+||.||+|.. .+|+.||||++...... .......+.+|+.+++.++||||+++++++.+.+..|+
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 225 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIV-AKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF 225 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC--------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhh-hhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence 46899999999999999999965 47899999999764322 22334567889999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHh-cCCCCcEecCCCCCCeeeCCCCcEEEecccccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHH-DCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFV 907 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~ 907 (1078)
||||+++|+|.+++.. ...+++..+..++.||+.||+|||+ + +|+||||||+|||++.++.+||+|||+++..
T Consensus 226 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 299 (446)
T 4ejn_A 226 VMEYANGGELFFHLSR---ERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEG 299 (446)
T ss_dssp EECCCSSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred EEeeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence 9999999999999943 3568999999999999999999998 7 9999999999999999999999999999865
Q ss_pred cCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCCC
Q 039595 908 EPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSP 987 (1078)
Q Consensus 908 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 987 (1078)
..........+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.. ....++..
T Consensus 300 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~i~~----~~~~~p~~-- 371 (446)
T 4ejn_A 300 IKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--EKLFELILM----EEIRFPRT-- 371 (446)
T ss_dssp CC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHH----CCCCCCTT--
T ss_pred cCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH--HHHHHHHHh----CCCCCCcc--
Confidence 4444445567899999999999999999999999999999999999999753322 111111111 11111111
Q ss_pred ccHHHHHHHHHHHHhcccCCCCCCC-----ChhHHHHHhhhhhh
Q 039595 988 GVMDKLISIMEVAILCLDESPEARP-----TMEKGFGHHIGYCD 1026 (1078)
Q Consensus 988 ~~~~~~~~l~~li~~cl~~dP~~RP-----t~~ell~h~~~~~~ 1026 (1078)
.. ..+.+++.+||+.||++|| +++|+++|+|+..-
T Consensus 372 -~~---~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~ 411 (446)
T 4ejn_A 372 -LG---PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI 411 (446)
T ss_dssp -SC---HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred -CC---HHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCC
Confidence 11 2577899999999999999 99999999998764
No 95
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=6.2e-40 Score=360.83 Aligned_cols=254 Identities=22% Similarity=0.266 Sum_probs=185.2
Q ss_pred cCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEEE
Q 039595 751 DDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFLV 829 (1078)
Q Consensus 751 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 829 (1078)
++|++.+.||+|+||.||+|.. .+|+.||+|++...... .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLA-KSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcc-hHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 6899999999999999999965 47899999999765432 233466788999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccccccC
Q 039595 830 CEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVEP 909 (1078)
Q Consensus 830 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~~ 909 (1078)
|||+ ++++.+++.. ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+.....
T Consensus 92 ~e~~-~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 164 (275)
T 2eue_A 92 IEYA-GNELFDYIVQ---RDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp EECC-CEEHHHHHHT---SSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC-----
T ss_pred ehhc-CCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccC
Confidence 9999 6688888743 34589999999999999999999999 999999999999999999999999999986644
Q ss_pred CCCCceeeccccccccccccccCCC-CccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCCCc
Q 039595 910 YSSNRTEFVGTFGYAAPEIAYTMRA-TEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSPG 988 (1078)
Q Consensus 910 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1078)
. .......||+.|+|||.+.+..+ +.++||||+||++|||++|+.||+.... ......+... ...... .
T Consensus 165 ~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~~~~~----~~~~~~---~ 234 (275)
T 2eue_A 165 G-NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI--PVLFKNISNG----VYTLPK---F 234 (275)
T ss_dssp -----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHT----CCCCCT---T
T ss_pred c-ccccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhC----CCCCCc---c
Confidence 2 22344579999999999988765 7899999999999999999999764322 1111111111 111111 1
Q ss_pred cHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 989 VMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 989 ~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
. ...+.+++.+||+.||++|||++|+++|+|+..
T Consensus 235 ~---~~~~~~li~~~l~~dP~~Rps~~e~l~h~~f~~ 268 (275)
T 2eue_A 235 L---SPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV 268 (275)
T ss_dssp S---CHHHHHHHHHHSCSSGGGSCCHHHHTTCHHHHT
T ss_pred C---CHHHHHHHHHHhhcCHhHCCCHHHHhhCCeecc
Confidence 1 125778999999999999999999999999764
No 96
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=6.7e-40 Score=361.35 Aligned_cols=256 Identities=29% Similarity=0.416 Sum_probs=205.8
Q ss_pred hhcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeE
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSF 827 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 827 (1078)
+.++|++.+.||+|+||+||+|... +++.||+|++...... .......+.+|+.++++++||||+++++++.+.+..+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 85 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVY 85 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-HHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccc-hhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEE
Confidence 4578999999999999999999654 6789999998654321 1223567889999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccccc
Q 039595 828 LVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFV 907 (1078)
Q Consensus 828 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~ 907 (1078)
+||||+++|+|.+++.. ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 86 lv~e~~~~~~l~~~l~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~ 159 (279)
T 3fdn_A 86 LILEYAPLGTVYRELQK---LSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHA 159 (279)
T ss_dssp EEECCCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC
T ss_pred EEEecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccC
Confidence 99999999999999843 34589999999999999999999999 9999999999999999999999999998654
Q ss_pred cCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCCC
Q 039595 908 EPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSP 987 (1078)
Q Consensus 908 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 987 (1078)
.. .......|++.|+|||.+.+..++.++||||+|+++|+|++|+.||..... ......+.. .....+..
T Consensus 160 ~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~----~~~~~~~~-- 229 (279)
T 3fdn_A 160 PS--SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY--QETYKRISR----VEFTFPDF-- 229 (279)
T ss_dssp ----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHHHH----TCCCCCTT--
T ss_pred Cc--ccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcH--HHHHHHHHh----CCCCCCCc--
Confidence 32 223456789999999999999999999999999999999999999753221 111111111 11111111
Q ss_pred ccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 988 GVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 988 ~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
. ...+.+++.+||+.||++|||++|+++|+|+..
T Consensus 230 -~---~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~ 263 (279)
T 3fdn_A 230 -V---TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 263 (279)
T ss_dssp -S---CHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHH
T ss_pred -C---CHHHHHHHHHHhccChhhCCCHHHHhhCccccC
Confidence 1 125678999999999999999999999999654
No 97
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.2e-39 Score=360.35 Aligned_cols=259 Identities=22% Similarity=0.295 Sum_probs=209.8
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
.++|++.+.||+|+||.||+|..+ +++.||+|++..... .....+.+.+|+.++++++||||+++++++.++...++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 82 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL--SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 82 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccC--CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEE
Confidence 478999999999999999999654 689999999976532 34456778899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCc---EEEecccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFE---AHVSDFGIAK 905 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~---~kl~DfG~a~ 905 (1078)
||||+++|+|.+++.. ...+++.++..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||.+.
T Consensus 83 v~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~ 156 (284)
T 3kk8_A 83 VFDLVTGGELFEDIVA---REFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAI 156 (284)
T ss_dssp EECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeE
Confidence 9999999999988843 35689999999999999999999999 9999999999999987655 9999999998
Q ss_pred cccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCC
Q 039595 906 FVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTP 985 (1078)
Q Consensus 906 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 985 (1078)
..... .......||+.|+|||.+.+..++.++||||+|+++|+|++|+.||..... ......... .....+
T Consensus 157 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~--~~~~~~~~~------~~~~~~ 227 (284)
T 3kk8_A 157 EVNDS-EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--HRLYAQIKA------GAYDYP 227 (284)
T ss_dssp ECCSS-CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHH------TCCCCC
T ss_pred EcccC-ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCch--hHHHHHHHh------ccccCC
Confidence 76542 223456799999999999999999999999999999999999999753222 111111111 111111
Q ss_pred CCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 986 SPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 986 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
.+........+.+++.+||+.||++|||++|+++|+|+..
T Consensus 228 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~ 267 (284)
T 3kk8_A 228 SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICN 267 (284)
T ss_dssp TTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHS
T ss_pred chhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCccccC
Confidence 1111111235778999999999999999999999999754
No 98
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.2e-39 Score=367.01 Aligned_cols=262 Identities=21% Similarity=0.224 Sum_probs=211.7
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccC--ChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCee
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSG--NMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHS 826 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 826 (1078)
.++|++.+.||+|+||.||+|..+ +|+.||||++....... .....+.+.+|+.++++++||||+++++++.++...
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 467999999999999999999765 68999999997654322 122467899999999999999999999999999999
Q ss_pred EEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCC----cEEEeccc
Q 039595 827 FLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEF----EAHVSDFG 902 (1078)
Q Consensus 827 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~----~~kl~DfG 902 (1078)
++||||+++++|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++ .+||+|||
T Consensus 91 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg 164 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQ---KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (321)
T ss_dssp EEEECCCCSCBHHHHHHT---CSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCT
T ss_pred EEEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCc
Confidence 999999999999999954 34689999999999999999999999 999999999999999888 79999999
Q ss_pred ccccccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCC
Q 039595 903 IAKFVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRL 982 (1078)
Q Consensus 903 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 982 (1078)
++....... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||..... ...... +.....
T Consensus 165 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~------i~~~~~ 235 (321)
T 2a2a_A 165 LAHEIEDGV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--QETLAN------ITSVSY 235 (321)
T ss_dssp TCEECCTTC-CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHH------HHTTCC
T ss_pred cceecCccc-cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH--HHHHHH------HHhccc
Confidence 998765432 23456799999999999999999999999999999999999999753321 111111 111111
Q ss_pred CCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhhh
Q 039595 983 STPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYCD 1026 (1078)
Q Consensus 983 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~~ 1026 (1078)
..+..........+.+++.+||+.||++|||++|+++|+|+...
T Consensus 236 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~~ 279 (321)
T 2a2a_A 236 DFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPV 279 (321)
T ss_dssp CCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSCS
T ss_pred ccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCccccCC
Confidence 10000000112357889999999999999999999999998753
No 99
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=7.2e-40 Score=360.90 Aligned_cols=261 Identities=24% Similarity=0.387 Sum_probs=189.4
Q ss_pred hhcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeE
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSF 827 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 827 (1078)
..++|++.+.||+|+||.||+|.. .+|+.||||++...... .....+.+.+|+.++++++||||+++++++.+.+..+
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 87 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMY-KAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVY 87 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEE
T ss_pred ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhh-hhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEE
Confidence 346799999999999999999976 57999999998654321 1223567899999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccccc
Q 039595 828 LVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFV 907 (1078)
Q Consensus 828 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~ 907 (1078)
+||||+++++|.+++... ...+++.+++.++.|++.||+|||++ +++||||||+||+++.++.+||+|||.+...
T Consensus 88 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~ 162 (278)
T 3cok_A 88 LVLEMCHNGEMNRYLKNR--VKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQL 162 (278)
T ss_dssp EEEECCTTEEHHHHHHTC--SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEecCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeec
Confidence 999999999999999542 35689999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCCC
Q 039595 908 EPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSP 987 (1078)
Q Consensus 908 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 987 (1078)
...........||+.|+|||.+.+..++.++||||+|+++|||++|+.||...... .... .........+ .
T Consensus 163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~------~~~~~~~~~~-~ 233 (278)
T 3cok_A 163 KMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVK--NTLN------KVVLADYEMP-S 233 (278)
T ss_dssp C----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-------------CCSSCCCCC-T
T ss_pred cCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHH--HHHH------HHhhcccCCc-c
Confidence 54444444567999999999999989999999999999999999999997643321 1100 1111111111 1
Q ss_pred ccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhhhH
Q 039595 988 GVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYCDE 1027 (1078)
Q Consensus 988 ~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~~~ 1027 (1078)
.. ..++.+++.+||+.||++|||++|+++|+|+....
T Consensus 234 ~~---~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 270 (278)
T 3cok_A 234 FL---SIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNS 270 (278)
T ss_dssp TS---CHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC---
T ss_pred cc---CHHHHHHHHHHcccCHhhCCCHHHHhcCccccCCC
Confidence 11 23577899999999999999999999999986543
No 100
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.7e-39 Score=372.49 Aligned_cols=256 Identities=22% Similarity=0.374 Sum_probs=206.6
Q ss_pred hcCCCccceeccCCceeEEEEEeC--------CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcC-CCCceeeEEeee
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP--------SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEI-RHRNIVKFHGFC 820 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~ 820 (1078)
.++|++.+.||+|+||.||+|... ++..||||+++... .....+.+.+|+.+++++ +||||+++++++
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~ 156 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA---TEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 156 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC---BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEE
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc---CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEE
Confidence 468999999999999999999652 35579999997542 344567799999999999 899999999999
Q ss_pred ecCCeeEEEEeecCCCCHHHHhcCCCC-------------CCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCC
Q 039595 821 SNARHSFLVCEYLHRGSLARILGNDAT-------------AKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKN 887 (1078)
Q Consensus 821 ~~~~~~~lv~E~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~N 887 (1078)
.+++..|+||||+++|+|.+++..... ...+++.+++.++.||+.||+|||++ +|+||||||+|
T Consensus 157 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~N 233 (370)
T 2psq_A 157 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARN 233 (370)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGG
T ss_pred ccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ceeccccchhh
Confidence 999999999999999999999965321 24589999999999999999999999 99999999999
Q ss_pred eeeCCCCcEEEecccccccccCCCC--CceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccc
Q 039595 888 VLLDLEFEAHVSDFGIAKFVEPYSS--NRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSINF 964 (1078)
Q Consensus 888 Ill~~~~~~kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~~ 964 (1078)
|+++.++.+||+|||+++....... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.....
T Consensus 234 Ill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~-- 311 (370)
T 2psq_A 234 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-- 311 (370)
T ss_dssp EEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG--
T ss_pred EEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH--
Confidence 9999999999999999987654322 2234467889999999999999999999999999999999 9999754322
Q ss_pred cchhhhhhhhhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhh
Q 039595 965 SSFSNMIIEVNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHI 1022 (1078)
Q Consensus 965 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~ 1022 (1078)
....... .....+... .... ..+.+++.+||+.||++|||++|++++.-
T Consensus 312 ~~~~~~~---~~~~~~~~~---~~~~---~~l~~li~~~l~~dP~~Rpt~~ell~~L~ 360 (370)
T 2psq_A 312 EELFKLL---KEGHRMDKP---ANCT---NELYMMMRDCWHAVPSQRPTFKQLVEDLD 360 (370)
T ss_dssp GGHHHHH---HTTCCCCCC---TTSC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHH---hcCCCCCCC---CCCC---HHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1111111 111111111 1112 25778899999999999999999998754
No 101
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=9.1e-40 Score=378.46 Aligned_cols=271 Identities=19% Similarity=0.242 Sum_probs=209.5
Q ss_pred hcCCCccceeccC--CceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCee
Q 039595 750 TDDFDEKFCIGKG--GQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHS 826 (1078)
Q Consensus 750 ~~~~~~~~~lG~G--~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 826 (1078)
.++|++.+.||+| +||+||+|..+ +|+.||||++..... .....+.+.+|+.++++++||||+++++++.+++..
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 101 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEAC--SNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNEL 101 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGS--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEeccccc--ChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEE
Confidence 4689999999999 99999999765 799999999976532 234567788999999999999999999999999999
Q ss_pred EEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccc
Q 039595 827 FLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKF 906 (1078)
Q Consensus 827 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~ 906 (1078)
|+||||+++|+|.+++... ....+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||.+..
T Consensus 102 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~ 177 (389)
T 3gni_B 102 WVVTSFMAYGSAKDLICTH-FMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLS 177 (389)
T ss_dssp EEEEECCTTCBHHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEEEccCCCCHHHHHhhh-cccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEccccccee
Confidence 9999999999999999543 234589999999999999999999999 999999999999999999999999999875
Q ss_pred ccCCC-------CCceeecccccccccccccc--CCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhh
Q 039595 907 VEPYS-------SNRTEFVGTFGYAAPEIAYT--MRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQI 977 (1078)
Q Consensus 907 ~~~~~-------~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 977 (1078)
..... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....................
T Consensus 178 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 257 (389)
T 3gni_B 178 MISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCL 257 (389)
T ss_dssp CEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC--------
T ss_pred eccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCcc
Confidence 43211 11223478999999999987 5789999999999999999999999864332211000000000000
Q ss_pred cCCCC----------------------------------CCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhh
Q 039595 978 LDPRL----------------------------------STPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIG 1023 (1078)
Q Consensus 978 ~~~~~----------------------------------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~ 1023 (1078)
.+... ....+........+.+++.+||+.||++|||++|+++|+|+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f 337 (389)
T 3gni_B 258 LDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFF 337 (389)
T ss_dssp ------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGG
T ss_pred ccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHH
Confidence 00000 00000001112358889999999999999999999999998
Q ss_pred hhh
Q 039595 1024 YCD 1026 (1078)
Q Consensus 1024 ~~~ 1026 (1078)
...
T Consensus 338 ~~~ 340 (389)
T 3gni_B 338 KQI 340 (389)
T ss_dssp GGC
T ss_pred HHH
Confidence 753
No 102
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1.3e-38 Score=356.22 Aligned_cols=275 Identities=32% Similarity=0.495 Sum_probs=222.7
Q ss_pred CccHHHHHHhhcCCCcc------ceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCce
Q 039595 740 KIMHEEIIKATDDFDEK------FCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNI 813 (1078)
Q Consensus 740 ~~~~~~~~~~~~~~~~~------~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni 813 (1078)
.+..+++.++++.|... +.||+|+||.||+|.. +++.||||++............+.+.+|+.++++++||||
T Consensus 14 ~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 92 (307)
T 2nru_A 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENL 92 (307)
T ss_dssp ECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTB
T ss_pred cccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCe
Confidence 46788999999888877 8999999999999986 5889999999765433344456789999999999999999
Q ss_pred eeEEeeeecCCeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCC
Q 039595 814 VKFHGFCSNARHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLE 893 (1078)
Q Consensus 814 v~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~ 893 (1078)
+++++++.+++..++||||+++|+|.+++........+++..++.++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 93 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~ 169 (307)
T 2nru_A 93 VELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEA 169 (307)
T ss_dssp CCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTT
T ss_pred EEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEcCC
Confidence 999999999999999999999999999996555556799999999999999999999999 99999999999999999
Q ss_pred CcEEEecccccccccCCCCC--ceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccc--cchhh
Q 039595 894 FEAHVSDFGIAKFVEPYSSN--RTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINF--SSFSN 969 (1078)
Q Consensus 894 ~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~--~~~~~ 969 (1078)
+.+||+|||+++........ .....||+.|+|||.+.+ .++.++||||||+++|+|++|+.||+...... .....
T Consensus 170 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 248 (307)
T 2nru_A 170 FTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKE 248 (307)
T ss_dssp CCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHH
T ss_pred CcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHH
Confidence 99999999999876543222 234578999999998875 58899999999999999999999976443221 11111
Q ss_pred hhh----hhhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhh
Q 039595 970 MII----EVNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHI 1022 (1078)
Q Consensus 970 ~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~ 1022 (1078)
... .....+++.... ........+.+++.+||+.||.+|||+++++++.-
T Consensus 249 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~ 302 (307)
T 2nru_A 249 EIEDEEKTIEDYIDKKMND---ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302 (307)
T ss_dssp HHHTTSCCHHHHSCSSCSC---CCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred Hhhhhhhhhhhhccccccc---cchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 111 112233333322 22344567889999999999999999999998754
No 103
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=8.7e-40 Score=366.60 Aligned_cols=267 Identities=22% Similarity=0.270 Sum_probs=204.2
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
.++|++.+.||+|+||+||+|... +|+.||||++.... ......+.+.+|+.++++++||||+++++++.+++..++
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 79 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESE--DDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHL 79 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCC--C-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccc--cchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEE
Confidence 367999999999999999999764 69999999986542 233445678899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVE 908 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~ 908 (1078)
||||+++++|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+....
T Consensus 80 v~e~~~~~~l~~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 153 (311)
T 4agu_A 80 VFEYCDHTVLHELDRY---QRGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLT 153 (311)
T ss_dssp EEECCSEEHHHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEeCCCchHHHHHhh---hcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhcc
Confidence 9999999999998843 34589999999999999999999999 99999999999999999999999999998776
Q ss_pred CCCCCceeecccccccccccccc-CCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhh--------------
Q 039595 909 PYSSNRTEFVGTFGYAAPEIAYT-MRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIE-------------- 973 (1078)
Q Consensus 909 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~-------------- 973 (1078)
..........||+.|+|||++.+ ..++.++||||+|+++|||++|+.||....... ....+..
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 231 (311)
T 4agu_A 154 GPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVD--QLYLIRKTLGDLIPRHQQVFS 231 (311)
T ss_dssp ------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHHHCSCCHHHHHHHH
T ss_pred CcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhcccccccccccc
Confidence 54444556789999999999876 568999999999999999999999976433211 0000000
Q ss_pred hhhhcC-CCCCCCCCc------cHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhhh
Q 039595 974 VNQILD-PRLSTPSPG------VMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYCD 1026 (1078)
Q Consensus 974 ~~~~~~-~~~~~~~~~------~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~~ 1026 (1078)
...... .....+... .......+.+++.+||+.||++|||++|+++|+|+..-
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 291 (311)
T 4agu_A 232 TNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENI 291 (311)
T ss_dssp TCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTC
T ss_pred cccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhc
Confidence 000000 011110000 01112357889999999999999999999999998753
No 104
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.1e-39 Score=359.34 Aligned_cols=257 Identities=21% Similarity=0.264 Sum_probs=208.3
Q ss_pred hhcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeE
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSF 827 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 827 (1078)
..++|++.+.||+|+||.||+|..+ ++..||+|++..... ...+.+.+|+.++++++||||+++++++.++...+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV----EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIY 82 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC----SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc----chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEE
Confidence 3467999999999999999999664 578999999876532 34677899999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeee---CCCCcEEEeccccc
Q 039595 828 LVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLL---DLEFEAHVSDFGIA 904 (1078)
Q Consensus 828 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~kl~DfG~a 904 (1078)
+||||+++++|.+++.. ...+++.+++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||.+
T Consensus 83 lv~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~ 156 (277)
T 3f3z_A 83 LVMELCTGGELFERVVH---KRVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLA 156 (277)
T ss_dssp EEEECCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEeccCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccc
Confidence 99999999999998843 34589999999999999999999999 99999999999999 78899999999999
Q ss_pred ccccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCC
Q 039595 905 KFVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLST 984 (1078)
Q Consensus 905 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 984 (1078)
...... .......||+.|+|||.+.+. ++.++||||+|+++|||++|+.||...... ..... +.......
T Consensus 157 ~~~~~~-~~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~------~~~~~~~~ 226 (277)
T 3f3z_A 157 ARFKPG-KMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDS--EVMLK------IREGTFTF 226 (277)
T ss_dssp EECCTT-SCBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHH------HHHCCCCC
T ss_pred eeccCc-cchhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHH--HHHHH------HHhCCCCC
Confidence 876543 234456799999999998764 899999999999999999999997543221 11111 11111111
Q ss_pred CCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 985 PSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 985 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
+..........+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 227 ~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~ 267 (277)
T 3f3z_A 227 PEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEK 267 (277)
T ss_dssp CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHH
T ss_pred CchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhc
Confidence 11100111236788999999999999999999999999754
No 105
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.5e-39 Score=359.66 Aligned_cols=259 Identities=24% Similarity=0.333 Sum_probs=203.7
Q ss_pred hcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
.++|++.+.||+|+||+||+|.. .+++.||+|++.... .....+.+.+|+.++++++||||+++++++.+....++
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 97 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR---SQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYI 97 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG---CCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccc---cchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEE
Confidence 36799999999999999999965 468999999997653 23346778999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhcCC-CCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeee---CCCCcEEEeccccc
Q 039595 829 VCEYLHRGSLARILGND-ATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLL---DLEFEAHVSDFGIA 904 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~kl~DfG~a 904 (1078)
||||+++|+|.+++... .....+++..++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||++
T Consensus 98 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a 174 (285)
T 3is5_A 98 VMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLA 174 (285)
T ss_dssp EECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCC
T ss_pred EEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecc
Confidence 99999999999988432 1235689999999999999999999999 99999999999999 45688999999999
Q ss_pred ccccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCC
Q 039595 905 KFVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLST 984 (1078)
Q Consensus 905 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 984 (1078)
...... .......||+.|+|||.+. ..++.++||||+|+++|||++|+.||...... .... ......+....
T Consensus 175 ~~~~~~-~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~--~~~~----~~~~~~~~~~~ 246 (285)
T 3is5_A 175 ELFKSD-EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE--EVQQ----KATYKEPNYAV 246 (285)
T ss_dssp CC-----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHH----HHHHCCCCCCC
T ss_pred eecCCc-ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH--HHHh----hhccCCccccc
Confidence 866442 2334567999999999876 46899999999999999999999997543221 1111 11111222221
Q ss_pred CCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 985 PSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 985 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
...... ..+.+++.+||+.||++|||++|+++|+|+..
T Consensus 247 ~~~~~~---~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~ 284 (285)
T 3is5_A 247 ECRPLT---PQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ 284 (285)
T ss_dssp --CCCC---HHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred ccCcCC---HHHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence 111112 25678999999999999999999999999763
No 106
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.5e-39 Score=386.32 Aligned_cols=265 Identities=22% Similarity=0.281 Sum_probs=214.6
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
.++|+..+.||+|+||+||+|+.+ +|+.||+|++.+.... .....+.+.+|+.++++++||||+++++++.+....|+
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~-~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 262 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLK-KRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCL 262 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhh-hhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEE
Confidence 468999999999999999999765 7999999999764322 12335678899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhcCCC-CCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccccc
Q 039595 829 VCEYLHRGSLARILGNDA-TAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFV 907 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~ 907 (1078)
||||++||+|.+++.... ....+++..++.++.||+.||+|||++ +|+||||||+||+++.+|.+||+|||+++..
T Consensus 263 VmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~ 339 (543)
T 3c4z_A 263 VMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVEL 339 (543)
T ss_dssp EECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeec
Confidence 999999999999986533 245699999999999999999999999 9999999999999999999999999999887
Q ss_pred cCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCCC
Q 039595 908 EPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSP 987 (1078)
Q Consensus 908 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 987 (1078)
..........+||+.|+|||++.+..++.++||||+||++|||++|+.||........ ..... ..+.......+ .
T Consensus 340 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~-~~~~~---~~i~~~~~~~p-~ 414 (543)
T 3c4z_A 340 KAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE-NKELK---QRVLEQAVTYP-D 414 (543)
T ss_dssp CTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCC-HHHHH---HHHHHCCCCCC-T
T ss_pred cCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchh-HHHHH---HHHhhcccCCC-c
Confidence 6544444556899999999999999999999999999999999999999764322110 01111 11111111111 1
Q ss_pred ccHHHHHHHHHHHHhcccCCCCCCCC-----hhHHHHHhhhhhh
Q 039595 988 GVMDKLISIMEVAILCLDESPEARPT-----MEKGFGHHIGYCD 1026 (1078)
Q Consensus 988 ~~~~~~~~l~~li~~cl~~dP~~RPt-----~~ell~h~~~~~~ 1026 (1078)
.. ...+.+++.+||+.||++||+ ++++++|+|+..-
T Consensus 415 ~~---s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i 455 (543)
T 3c4z_A 415 KF---SPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI 455 (543)
T ss_dssp TS---CHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTC
T ss_pred cc---CHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCC
Confidence 11 125678899999999999996 4899999998753
No 107
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.8e-39 Score=386.22 Aligned_cols=263 Identities=22% Similarity=0.267 Sum_probs=213.6
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
.++|++.+.||+|+||.||+|..+ +|+.||||++.+.... .......+.+|+.++++++||||+++++++.+.+..|+
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~-~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-KRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhh-hhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 467999999999999999999764 7999999999764322 12235668899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVE 908 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~ 908 (1078)
||||++||+|.+++.... ...+++..++.++.||+.||+|||++ +|+||||||+||+++.+|.+||+|||+++...
T Consensus 262 VmEy~~gg~L~~~l~~~~-~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~ 337 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMG-QAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVP 337 (576)
T ss_dssp EECCCCSCBHHHHHHSSS-SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEcCCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecc
Confidence 999999999999995432 34589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCCCc
Q 039595 909 PYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSPG 988 (1078)
Q Consensus 909 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1078)
.. ......+||+.|+|||++.+..++.++||||+||++|||++|+.||....... ....+..........+...
T Consensus 338 ~~-~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~--~~~~i~~~i~~~~~~~p~~--- 411 (576)
T 2acx_A 338 EG-QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI--KREEVERLVKEVPEEYSER--- 411 (576)
T ss_dssp TT-CCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC--CHHHHHHHHHHCCCCCCTT---
T ss_pred cC-ccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccch--hHHHHHHHhhcccccCCcc---
Confidence 42 23345689999999999999899999999999999999999999976433211 1111111111112222211
Q ss_pred cHHHHHHHHHHHHhcccCCCCCCC-----ChhHHHHHhhhhhh
Q 039595 989 VMDKLISIMEVAILCLDESPEARP-----TMEKGFGHHIGYCD 1026 (1078)
Q Consensus 989 ~~~~~~~l~~li~~cl~~dP~~RP-----t~~ell~h~~~~~~ 1026 (1078)
. ..++.+++.+||+.||++|| +++|+++|+|+..-
T Consensus 412 ~---s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i 451 (576)
T 2acx_A 412 F---SPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKL 451 (576)
T ss_dssp S---CHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTC
T ss_pred C---CHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccC
Confidence 1 13678899999999999999 78999999998753
No 108
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.9e-40 Score=380.01 Aligned_cols=267 Identities=23% Similarity=0.255 Sum_probs=210.8
Q ss_pred HHHHHhhcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeec
Q 039595 744 EEIIKATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSN 822 (1078)
Q Consensus 744 ~~~~~~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 822 (1078)
++.....++|++.+.||+|+||+||+|+.+ +|+.||||++.+.... .....+.+.+|..++..++||||+++++++.+
T Consensus 54 ~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~-~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDML-KRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH-HHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhh-hHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 344455689999999999999999999764 7999999999753211 11223457889999999999999999999999
Q ss_pred CCeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccc
Q 039595 823 ARHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFG 902 (1078)
Q Consensus 823 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 902 (1078)
....|+||||+++|+|.+++.+. ...+++..++.++.||+.||+|||++ +|+||||||+|||++.+|.+||+|||
T Consensus 133 ~~~~~lVmE~~~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFG 207 (412)
T 2vd5_A 133 ENYLYLVMEYYVGGDLLTLLSKF--GERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFG 207 (412)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHH--SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEcCCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeech
Confidence 99999999999999999999532 23689999999999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCC-ceeeccccccccccccc-------cCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhh
Q 039595 903 IAKFVEPYSSN-RTEFVGTFGYAAPEIAY-------TMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEV 974 (1078)
Q Consensus 903 ~a~~~~~~~~~-~~~~~gt~~y~aPE~~~-------~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~ 974 (1078)
+++........ ....+||+.|+|||++. +..++.++|||||||++|||++|+.||.... .......+...
T Consensus 208 la~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~--~~~~~~~i~~~ 285 (412)
T 2vd5_A 208 SCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADS--TAETYGKIVHY 285 (412)
T ss_dssp TCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSS--HHHHHHHHHTH
T ss_pred hheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCC--HHHHHHHHHhc
Confidence 99876543322 23468999999999987 3568999999999999999999999975332 12222222211
Q ss_pred hhhc-CCCCCCCCCccHHHHHHHHHHHHhcccCCCCCC---CChhHHHHHhhhhh
Q 039595 975 NQIL-DPRLSTPSPGVMDKLISIMEVAILCLDESPEAR---PTMEKGFGHHIGYC 1025 (1078)
Q Consensus 975 ~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Pt~~ell~h~~~~~ 1025 (1078)
.... .|... .... .++.+++.+||. +|++| |+++|+++|+|+..
T Consensus 286 ~~~~~~p~~~---~~~s---~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~ 333 (412)
T 2vd5_A 286 KEHLSLPLVD---EGVP---EEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFG 333 (412)
T ss_dssp HHHCCCC-------CCC---HHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTT
T ss_pred ccCcCCCccc---cCCC---HHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCC
Confidence 1111 11111 1111 257789999999 99998 69999999999864
No 109
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=2.1e-39 Score=362.88 Aligned_cols=271 Identities=23% Similarity=0.290 Sum_probs=201.6
Q ss_pred hhcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccC-ChhhHHHHHHHHHHHhcC---CCCceeeEEeeeecC
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSG-NMADQDEFLNVVLALNEI---RHRNIVKFHGFCSNA 823 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~ 823 (1078)
..++|++.+.||+|+||+||+|.. .+++.||||++....... .......+.+|+.+++++ +||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 457899999999999999999975 578999999987543211 111233456677766666 599999999999765
Q ss_pred C-----eeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEE
Q 039595 824 R-----HSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHV 898 (1078)
Q Consensus 824 ~-----~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl 898 (1078)
. ..++||||+. |+|.+++.... ...+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl 161 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAP-PPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKL 161 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCC-TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEE
Confidence 4 5799999997 59999996533 34489999999999999999999999 9999999999999999999999
Q ss_pred ecccccccccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhc
Q 039595 899 SDFGIAKFVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQIL 978 (1078)
Q Consensus 899 ~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 978 (1078)
+|||.++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.......
T Consensus 162 ~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--~~~~~i~~~~~~~ 238 (308)
T 3g33_A 162 ADFGLARIYSYQ-MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA--DQLGKIFDLIGLP 238 (308)
T ss_dssp CSCSCTTTSTTC-CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHH--HHHHHHHHHHCCC
T ss_pred eeCccccccCCC-cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCC
Confidence 999999876532 2334568999999999999999999999999999999999999997543221 1111111100000
Q ss_pred -CCCCC-----------CCCCccH-----HHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhhhH
Q 039595 979 -DPRLS-----------TPSPGVM-----DKLISIMEVAILCLDESPEARPTMEKGFGHHIGYCDE 1027 (1078)
Q Consensus 979 -~~~~~-----------~~~~~~~-----~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~~~ 1027 (1078)
...+. ...+... .....+.+++.+||+.||++|||++|+++|+|+...+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~~ 304 (308)
T 3g33_A 239 PEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDE 304 (308)
T ss_dssp CTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC----
T ss_pred ChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccCCC
Confidence 00000 0000000 1123678899999999999999999999999987644
No 110
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.9e-39 Score=374.65 Aligned_cols=257 Identities=22% Similarity=0.344 Sum_probs=205.0
Q ss_pred cCCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCC--CCceeeEEeeeecCCeeEE
Q 039595 751 DDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIR--HRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 751 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~l 828 (1078)
++|++.+.||+|+||+||+|...+++.||||++..... .....+.+.+|+.++++++ ||||+++++++..++..|+
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~l 133 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 133 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccc--cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEE
Confidence 56999999999999999999888899999999976432 3445678999999999996 5999999999999999999
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVE 908 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~ 908 (1078)
||| +.+++|.+++... ..+++.+++.++.||+.||+|||++ +|+||||||+|||++ ++.+||+|||+++...
T Consensus 134 v~E-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~ 205 (390)
T 2zmd_A 134 VME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 205 (390)
T ss_dssp EEE-CCSEEHHHHHHHC---SSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred EEe-cCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence 999 5678999999543 4688999999999999999999999 999999999999995 6899999999998765
Q ss_pred CCCC--Cceeecccccccccccccc-----------CCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhh
Q 039595 909 PYSS--NRTEFVGTFGYAAPEIAYT-----------MRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVN 975 (1078)
Q Consensus 909 ~~~~--~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~ 975 (1078)
.... .....+||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... .....
T Consensus 206 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~-------~~~~~ 278 (390)
T 2zmd_A 206 PDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-------ISKLH 278 (390)
T ss_dssp --------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-------HHHHH
T ss_pred CCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH-------HHHHH
Confidence 4322 2345679999999999865 46899999999999999999999997532211 11222
Q ss_pred hhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhhh
Q 039595 976 QILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYCD 1026 (1078)
Q Consensus 976 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~~ 1026 (1078)
.+.++......+... ...+.+++.+||+.||++|||++|+++|+|+...
T Consensus 279 ~~~~~~~~~~~~~~~--~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~ 327 (390)
T 2zmd_A 279 AIIDPNHEIEFPDIP--EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ 327 (390)
T ss_dssp HHHCTTSCCCCCCCS--CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred HHhCccccCCCCccc--hHHHHHHHHHHcccChhhCCCHHHHhhCcCcccc
Confidence 333333222222221 1257789999999999999999999999998743
No 111
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=6.8e-39 Score=377.05 Aligned_cols=222 Identities=18% Similarity=0.196 Sum_probs=122.2
Q ss_pred cCccCCCCCCcccccccccceeecccccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcccCCC
Q 039595 158 DMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGL 237 (1078)
Q Consensus 158 ~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 237 (1078)
......+..+..++.+++|++|++++|.+++. | .++.+++|++|+|++|++++. | ++.+++|++|+|++|++++.
T Consensus 26 ~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~ 100 (457)
T 3bz5_A 26 AAFEMQATDTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL 100 (457)
T ss_dssp HHTTCCTTSEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC
T ss_pred HhcCcCcccccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee
Confidence 33444445555666666777777776666653 4 566666666666666666653 3 66666666666666666654
Q ss_pred CCCcccCCCCCcEEeccccccCCCCCcccCCCcccceeecccccccCccccccccccCCceeeecccCCCCCCCccccCC
Q 039595 238 IPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLDLIENQLSGSIPLSFGNLSSWTLMSLFSNSLSGSIPPILGNL 317 (1078)
Q Consensus 238 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l 317 (1078)
| ++++++|++|++++|++++ +| ++++++|++|++++|++++. .++.+++|+.|++++|...+.+ .++.+
T Consensus 101 -~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l 169 (457)
T 3bz5_A 101 -D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQ 169 (457)
T ss_dssp -C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTC
T ss_pred -e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccC
Confidence 2 6666666666666666664 33 56666666666666666653 2455555555555555433333 24445
Q ss_pred CccCeeeccccccCccCCCCCCCCCcCcEEEccCccCCCCCCccccccCCCCeEEcccccCccccCCCCccCCCCceeec
Q 039595 318 KSLSTLGLYLNQLNGVIPPSIGNLSSLRNLSLFNNGLYGSIPEEIGYLKSLSELKLCKNNLSGVIPHSVGNLTGLVLLNM 397 (1078)
Q Consensus 318 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 397 (1078)
++|++|++++|++++. | ++.+++|+.|++++|++++. .++.+++|++|++++|++++ +| +..+++|+.|++
T Consensus 170 ~~L~~L~ls~n~l~~l-~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l 240 (457)
T 3bz5_A 170 TQLTTLDCSFNKITEL-D--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDC 240 (457)
T ss_dssp TTCCEEECCSSCCCCC-C--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEEC
T ss_pred CcCCEEECCCCcccee-c--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEe
Confidence 5555555555555442 2 44444555555555555432 24444444444444444443 22 344444444444
Q ss_pred ccCcCCC
Q 039595 398 CENHLFG 404 (1078)
Q Consensus 398 ~~N~l~~ 404 (1078)
++|++++
T Consensus 241 ~~N~l~~ 247 (457)
T 3bz5_A 241 SVNPLTE 247 (457)
T ss_dssp CSSCCSC
T ss_pred eCCcCCC
Confidence 4444443
No 112
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=2.7e-39 Score=359.44 Aligned_cols=256 Identities=23% Similarity=0.368 Sum_probs=212.7
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
.++|++.+.||+|+||.||+|... +++.||+|++...... .....+.+.+|+.++++++||||+++++++.+++..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 92 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLL-KPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 92 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC-SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhcc-CHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEE
Confidence 467999999999999999999765 6889999998765322 34456778999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVE 908 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~ 908 (1078)
||||+++++|.+++.. ...+++.+++.++.|++.||+|||++ +++||||||+||+++.++.+||+|||.+....
T Consensus 93 v~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 166 (294)
T 2rku_A 93 VLELCRRRSLLELHKR---RKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 166 (294)
T ss_dssp EEECCTTCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecc
Confidence 9999999999998843 34689999999999999999999999 99999999999999999999999999998776
Q ss_pred CCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCCCc
Q 039595 909 PYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSPG 988 (1078)
Q Consensus 909 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1078)
..........||+.|+|||.+.+..++.++||||+|+++|||++|+.||...... .... .+.......+ ..
T Consensus 167 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~------~~~~~~~~~~-~~ 237 (294)
T 2rku_A 167 YDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK--ETYL------RIKKNEYSIP-KH 237 (294)
T ss_dssp STTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHH------HHHTTCCCCC-TT
T ss_pred cCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHH------HHhhccCCCc-cc
Confidence 5444555678999999999999988999999999999999999999997643221 1111 1111111111 11
Q ss_pred cHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhh
Q 039595 989 VMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGY 1024 (1078)
Q Consensus 989 ~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~ 1024 (1078)
.. ..+.+++.+||+.||++|||++|+++|+|+.
T Consensus 238 ~~---~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~ 270 (294)
T 2rku_A 238 IN---PVAASLIQKMLQTDPTARPTINELLNDEFFT 270 (294)
T ss_dssp SC---HHHHHHHHHHTCSSGGGSCCGGGGGGSHHHH
T ss_pred cC---HHHHHHHHHHcccChhhCcCHHHHhhChhee
Confidence 11 2577889999999999999999999999975
No 113
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.6e-40 Score=369.51 Aligned_cols=264 Identities=19% Similarity=0.268 Sum_probs=197.2
Q ss_pred cCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEEE
Q 039595 751 DDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFLV 829 (1078)
Q Consensus 751 ~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 829 (1078)
++|++.+.||+|+||+||+|... +++.||||++...... .....+.+|+.++++++||||+++++++.+++..++|
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 78 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEE---GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLV 78 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC---------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccc---ccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEE
Confidence 57999999999999999999765 7899999998654311 1112345789999999999999999999999999999
Q ss_pred EeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccccccC
Q 039595 830 CEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVEP 909 (1078)
Q Consensus 830 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~~ 909 (1078)
|||+++ +|.+++... ...+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 79 ~e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 152 (324)
T 3mtl_A 79 FEYLDK-DLKQYLDDC--GNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSI 152 (324)
T ss_dssp EECCSE-EHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC--
T ss_pred eccccc-CHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccC
Confidence 999985 899888543 34589999999999999999999999 999999999999999999999999999987655
Q ss_pred CCCCceeecccccccccccccc-CCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhh-cCCCC-----
Q 039595 910 YSSNRTEFVGTFGYAAPEIAYT-MRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQI-LDPRL----- 982 (1078)
Q Consensus 910 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~----- 982 (1078)
.........||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .....+...... .+..+
T Consensus 153 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~ 230 (324)
T 3mtl_A 153 PTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVE--EQLHFIFRILGTPTEETWPGILS 230 (324)
T ss_dssp ----------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCCCCTTTSTTGGG
T ss_pred CccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCChHhchhhhc
Confidence 4444556688999999999876 56899999999999999999999997643221 111111110000 00000
Q ss_pred ---------CCCCCc-----cHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 983 ---------STPSPG-----VMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 983 ---------~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
...... ......++.+++.+||+.||++|||++|+++|||+..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~ 287 (324)
T 3mtl_A 231 NEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLS 287 (324)
T ss_dssp CHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGG
T ss_pred chhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhh
Confidence 000000 0011235789999999999999999999999999764
No 114
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.2e-39 Score=380.23 Aligned_cols=272 Identities=22% Similarity=0.266 Sum_probs=203.3
Q ss_pred HhhcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccC----ChhhHHHHHHHHHHHhcCCCCceeeEEeeeec
Q 039595 748 KATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSG----NMADQDEFLNVVLALNEIRHRNIVKFHGFCSN 822 (1078)
Q Consensus 748 ~~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 822 (1078)
...++|++.+.||+|+||+||+|.. .+++.||||++....... .......+.+|+.++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 3457899999999999999999965 468999999997643221 11122357899999999999999999999865
Q ss_pred CCeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCC---cEEEe
Q 039595 823 ARHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEF---EAHVS 899 (1078)
Q Consensus 823 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~---~~kl~ 899 (1078)
...++||||+++|+|.+++.. ...+++.++..++.|++.||+|||++ +|+||||||+||+++.++ .+||+
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~ 284 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVVG---NKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKIT 284 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTSS---SCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEEC
T ss_pred -CceEEEEEcCCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEe
Confidence 457999999999999998843 45689999999999999999999999 999999999999997544 59999
Q ss_pred cccccccccCCCCCceeecccccccccccccc---CCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhh
Q 039595 900 DFGIAKFVEPYSSNRTEFVGTFGYAAPEIAYT---MRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQ 976 (1078)
Q Consensus 900 DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~ 976 (1078)
|||+++..... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... .....+.
T Consensus 285 DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~-~~~~~i~---- 358 (419)
T 3i6u_A 285 DFGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLKDQIT---- 358 (419)
T ss_dssp CSSTTTSCC------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC-CHHHHHH----
T ss_pred ecccceecCCC-ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH-HHHHHHh----
Confidence 99999876542 23345689999999999863 568889999999999999999999976432211 1111111
Q ss_pred hcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhhhHHHHHHHH
Q 039595 977 ILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYCDEILAVILA 1034 (1078)
Q Consensus 977 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~~~~~~~~~~ 1034 (1078)
.................+.+++.+||+.||++|||++|+++|+|+...+.......
T Consensus 359 --~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~~~~~~~~ 414 (419)
T 3i6u_A 359 --SGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQD 414 (419)
T ss_dssp --TTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCCHHHHHHHHH
T ss_pred --cCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCChhHHHHHHH
Confidence 11111110000111236789999999999999999999999999987766555443
No 115
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=5.4e-39 Score=363.39 Aligned_cols=274 Identities=23% Similarity=0.318 Sum_probs=209.1
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
.++|++.+.||+|+||.||+|... +|+.||||++.... ......+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 101 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESD--DDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYL 101 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCS--SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCC--CchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEE
Confidence 468999999999999999999765 68999999986542 234445668899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVE 908 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~ 908 (1078)
||||+++++|.++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.++...
T Consensus 102 v~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 175 (331)
T 4aaa_A 102 VFEFVDHTILDDLELF---PNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLA 175 (331)
T ss_dssp EEECCSEEHHHHHHHS---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred EEecCCcchHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeec
Confidence 9999999999888743 34589999999999999999999999 99999999999999999999999999998766
Q ss_pred CCCCCceeeccccccccccccccC-CCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhh-------------h
Q 039595 909 PYSSNRTEFVGTFGYAAPEIAYTM-RATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIE-------------V 974 (1078)
Q Consensus 909 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~-------------~ 974 (1078)
..........||+.|+|||.+.+. .++.++||||+||++|||++|+.||....... ........ .
T Consensus 176 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 254 (331)
T 4aaa_A 176 APGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID-QLYHIMMCLGNLIPRHQELFNK 254 (331)
T ss_dssp --------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCHHHHHHHHH
T ss_pred CCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCChhhhhHhhh
Confidence 544445566899999999998875 78999999999999999999999976433211 01000000 0
Q ss_pred hh----hcCCCCCCCCCc---cHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhhhHHHHHH
Q 039595 975 NQ----ILDPRLSTPSPG---VMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYCDEILAVI 1032 (1078)
Q Consensus 975 ~~----~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~~~~~~~~ 1032 (1078)
.. ...+......+. .......+.+++.+||+.||++|||++|+++|+|+.........
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~~~~ 319 (331)
T 4aaa_A 255 NPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDGFAERF 319 (331)
T ss_dssp CGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHGGGHHHHH
T ss_pred ccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhccCChhhhh
Confidence 00 001111110000 00112368899999999999999999999999999876555443
No 116
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=5.1e-38 Score=369.56 Aligned_cols=246 Identities=18% Similarity=0.183 Sum_probs=208.1
Q ss_pred CcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeecccccccCCccCcccCCCCCcEEEcc
Q 039595 127 KLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLYLN 206 (1078)
Q Consensus 127 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~ 206 (1078)
.++......+...+..+.+++++++|++|++++|.+++ +| .++.+++|++|++++|.+++. | ++.+++|++|+|+
T Consensus 19 ~l~~~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls 93 (457)
T 3bz5_A 19 NFASEVAAAFEMQATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACD 93 (457)
T ss_dssp HHHHHHHHHTTCCTTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECC
T ss_pred HHHHHHHHhcCcCcccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECc
Confidence 34444444555666677789999999999999999995 46 689999999999999999974 4 8999999999999
Q ss_pred CCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCCCCcccCCCcccceeecccccccCcc
Q 039595 207 NNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLDLIENQLSGSI 286 (1078)
Q Consensus 207 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 286 (1078)
+|++++. | ++++++|++|+|++|++++. | ++.+++|++|++++|++++. + ++++++|++|++++|+..+.+
T Consensus 94 ~N~l~~~-~--~~~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~ 164 (457)
T 3bz5_A 94 SNKLTNL-D--VTPLTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL 164 (457)
T ss_dssp SSCCSCC-C--CTTCTTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC
T ss_pred CCCCcee-e--cCCCCcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc
Confidence 9999875 4 88999999999999999974 4 88999999999999999974 3 888999999999999766665
Q ss_pred ccccccccCCceeeecccCCCCCCCccccCCCccCeeeccccccCccCCCCCCCCCcCcEEEccCccCCCCCCccccccC
Q 039595 287 PLSFGNLSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLNGVIPPSIGNLSSLRNLSLFNNGLYGSIPEEIGYLK 366 (1078)
Q Consensus 287 p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 366 (1078)
.++.+++|+.|++++|++++ +| ++.+++|+.|++++|++++. .++.+++|+.|++++|++++ +| ++.++
T Consensus 165 --~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~ 233 (457)
T 3bz5_A 165 --DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLT 233 (457)
T ss_dssp --CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCT
T ss_pred --ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccC
Confidence 58889999999999999997 44 88999999999999999975 48889999999999999997 56 88899
Q ss_pred CCCeEEcccccCccccCCCCccCCCCceeecccC
Q 039595 367 SLSELKLCKNNLSGVIPHSVGNLTGLVLLNMCEN 400 (1078)
Q Consensus 367 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 400 (1078)
+|+.|++++|++++.. +..+++|+.|++++|
T Consensus 234 ~L~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n 264 (457)
T 3bz5_A 234 QLTYFDCSVNPLTELD---VSTLSKLTTLHCIQT 264 (457)
T ss_dssp TCSEEECCSSCCSCCC---CTTCTTCCEEECTTC
T ss_pred CCCEEEeeCCcCCCcC---HHHCCCCCEEeccCC
Confidence 9999999999999764 446677777777665
No 117
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=2.9e-39 Score=366.08 Aligned_cols=257 Identities=22% Similarity=0.353 Sum_probs=213.1
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
.++|++.+.||+|+||.||+|... +++.||+|++...... .....+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 118 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLL-KPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 118 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC-SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 468999999999999999999665 6889999998765322 34556778999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVE 908 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~ 908 (1078)
||||+++++|.+++.. ...+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 119 v~e~~~~~~L~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 192 (335)
T 2owb_A 119 VLELCRRRSLLELHKR---RKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 192 (335)
T ss_dssp EECCCTTCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEecCCCCCHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecc
Confidence 9999999999999843 35689999999999999999999999 99999999999999999999999999998776
Q ss_pred CCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCCCc
Q 039595 909 PYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSPG 988 (1078)
Q Consensus 909 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1078)
..........||+.|+|||++.+..++.++||||||+++|||++|+.||...... .....+... ...... .
T Consensus 193 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~----~~~~~~---~ 263 (335)
T 2owb_A 193 YDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK--ETYLRIKKN----EYSIPK---H 263 (335)
T ss_dssp STTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHHT----CCCCCT---T
T ss_pred cCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH--HHHHHHhcC----CCCCCc---c
Confidence 5444555678999999999999989999999999999999999999997533211 111111110 111111 1
Q ss_pred cHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 989 VMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 989 ~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
.. ..+.+++.+||+.||++|||++|+++|+|+..
T Consensus 264 ~~---~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~ 297 (335)
T 2owb_A 264 IN---PVAASLIQKMLQTDPTARPTINELLNDEFFTS 297 (335)
T ss_dssp SC---HHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHT
T ss_pred CC---HHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence 11 25678899999999999999999999999753
No 118
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=9.9e-40 Score=368.89 Aligned_cols=269 Identities=18% Similarity=0.220 Sum_probs=197.8
Q ss_pred HHhhcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCe
Q 039595 747 IKATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARH 825 (1078)
Q Consensus 747 ~~~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 825 (1078)
....++|++.+.||+|+||+||+|.. .+++.||||++..... .....+.+.+|+.++++++||||+++++++.++..
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (329)
T 3gbz_A 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHE--EEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHR 107 (329)
T ss_dssp --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC----------CHHHHHHGGGCCCTTBCCEEEEEEETTE
T ss_pred ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEccccc--ccccchhHHHHHHHHHHcCCCCcceEEEEEecCCE
Confidence 34567899999999999999999965 4789999999975432 22334567889999999999999999999999999
Q ss_pred eEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeee-----CCCCcEEEec
Q 039595 826 SFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLL-----DLEFEAHVSD 900 (1078)
Q Consensus 826 ~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll-----~~~~~~kl~D 900 (1078)
.++||||+++ +|.+++.. ...+++.+++.++.||+.||+|||++ +|+||||||+||++ +.++.+||+|
T Consensus 108 ~~lv~e~~~~-~L~~~~~~---~~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~D 180 (329)
T 3gbz_A 108 LHLIFEYAEN-DLKKYMDK---NPDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGD 180 (329)
T ss_dssp EEEEEECCSE-EHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECC
T ss_pred EEEEEecCCC-CHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECc
Confidence 9999999985 99999943 34589999999999999999999999 99999999999999 4555699999
Q ss_pred ccccccccCCCCCceeeccccccccccccccC-CCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhc-
Q 039595 901 FGIAKFVEPYSSNRTEFVGTFGYAAPEIAYTM-RATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQIL- 978 (1078)
Q Consensus 901 fG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~- 978 (1078)
||+++.............||+.|+|||++.+. .++.++||||+||++|||++|+.||...... ..............
T Consensus 181 fg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~~ 259 (329)
T 3gbz_A 181 FGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI-DQLFKIFEVLGLPDD 259 (329)
T ss_dssp TTHHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCT
T ss_pred CCCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHH-HHHHHHHHHhCCCch
Confidence 99998776544455667889999999999874 4899999999999999999999997543221 11111110000000
Q ss_pred ------------CCCCCCCCCccHH------HHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 979 ------------DPRLSTPSPGVMD------KLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 979 ------------~~~~~~~~~~~~~------~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
............. ...++.+++.+||+.||++|||++|+++|+|+..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~ 324 (329)
T 3gbz_A 260 TTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSH 324 (329)
T ss_dssp TTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSS
T ss_pred hhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCC
Confidence 0000000000111 1236789999999999999999999999999764
No 119
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=4.3e-39 Score=379.54 Aligned_cols=262 Identities=22% Similarity=0.285 Sum_probs=200.2
Q ss_pred hcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecC-----
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNA----- 823 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----- 823 (1078)
.++|++.+.||+|+||+||+|.. .+|+.||||++.... ......+.+.+|+.+++.++||||+++++++...
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~ 138 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 138 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGG--GSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTT
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccc--cChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCcccc
Confidence 57899999999999999999965 478999999997652 2344567788999999999999999999999654
Q ss_pred -CeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccc
Q 039595 824 -RHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFG 902 (1078)
Q Consensus 824 -~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 902 (1078)
...|+||||+++ ++.+.+. ..+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||
T Consensus 139 ~~~~~lv~E~~~~-~l~~~~~-----~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG 209 (464)
T 3ttj_A 139 FQDVYLVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 209 (464)
T ss_dssp CCEEEEEEECCSE-EHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCC
T ss_pred CCeEEEEEeCCCC-CHHHHHh-----hcCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEE
Confidence 467999999987 5766662 2388999999999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhh----------
Q 039595 903 IAKFVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMII---------- 972 (1078)
Q Consensus 903 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~---------- 972 (1078)
+|+.... .......+||+.|+|||++.+..++.++||||+||++|||++|+.||...+.. .....+.
T Consensus 210 ~a~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~--~~~~~i~~~lg~p~~~~ 286 (464)
T 3ttj_A 210 LARTAGT-SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI--DQWNKVIEQLGTPCPEF 286 (464)
T ss_dssp CC------CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHHHCSCCHHH
T ss_pred eeeecCC-CcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHhcCCCCHHH
Confidence 9987654 22345678999999999999999999999999999999999999997543211 1000000
Q ss_pred ------hhhhhcCCC--CCC-------------CCC-ccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 973 ------EVNQILDPR--LST-------------PSP-GVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 973 ------~~~~~~~~~--~~~-------------~~~-~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
......... ... ... .......++.+++.+||..||++|||++|+++|||+..
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~ 361 (464)
T 3ttj_A 287 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 361 (464)
T ss_dssp HTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred HHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhh
Confidence 000011100 000 000 00111346889999999999999999999999999863
No 120
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.2e-39 Score=363.03 Aligned_cols=251 Identities=20% Similarity=0.224 Sum_probs=195.7
Q ss_pred cCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcC-CCCceeeEEeeeecCCeeEE
Q 039595 751 DDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEI-RHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 751 ~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 828 (1078)
++|+..++||+|+||+||+|... +|+.||||++..... .......+..|+..+.++ +||||+++++++.+++..++
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l 134 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFR--GPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL 134 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCC--SHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEeccccc--ChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence 57999999999999999999765 799999999865432 233344455555555444 99999999999999999999
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVE 908 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~ 908 (1078)
||||+ +|+|.+++... ...+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 135 v~e~~-~~~L~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~ 208 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEAW--GASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELG 208 (311)
T ss_dssp EEECC-CCBHHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC
T ss_pred EEecc-CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecc
Confidence 99999 66999888543 34699999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCCCc
Q 039595 909 PYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSPG 988 (1078)
Q Consensus 909 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1078)
.. .......||+.|+|||++.+ .++.++|||||||++|||++|..|+..... . ..+..........
T Consensus 209 ~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~-~----------~~~~~~~~~~~~~- 274 (311)
T 3p1a_A 209 TA-GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG-W----------QQLRQGYLPPEFT- 274 (311)
T ss_dssp -------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH-H----------HHHTTTCCCHHHH-
T ss_pred cC-CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH-H----------HHHhccCCCcccc-
Confidence 42 23345579999999998876 789999999999999999999766421111 0 0111111100000
Q ss_pred cHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhh
Q 039595 989 VMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGY 1024 (1078)
Q Consensus 989 ~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~ 1024 (1078)
......+.+++.+||+.||++|||++|+++|||+.
T Consensus 275 -~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~ 309 (311)
T 3p1a_A 275 -AGLSSELRSVLVMMLEPDPKLRATAEALLALPVLR 309 (311)
T ss_dssp -TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGS
T ss_pred -cCCCHHHHHHHHHHcCCChhhCcCHHHHHhCcccc
Confidence 01123678899999999999999999999999974
No 121
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.6e-39 Score=354.60 Aligned_cols=254 Identities=24% Similarity=0.371 Sum_probs=207.1
Q ss_pred hcCCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFLV 829 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 829 (1078)
.++|++.+.||+|+||+||+|...+++.||+|++.... ...+.+.+|+.++++++||||+++++++.++...++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-----MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 83 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-----BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-----cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEE
Confidence 36799999999999999999988888999999997542 2356789999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccccccC
Q 039595 830 CEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVEP 909 (1078)
Q Consensus 830 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~~ 909 (1078)
|||+++|+|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.++....
T Consensus 84 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 158 (269)
T 4hcu_A 84 FEFMEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 158 (269)
T ss_dssp EECCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred EEeCCCCcHHHHHHhc--CcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccc
Confidence 9999999999999543 34589999999999999999999999 999999999999999999999999999986543
Q ss_pred CC-CCceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccchhhhhhhhhhhcCCCCCCCCC
Q 039595 910 YS-SNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSP 987 (1078)
Q Consensus 910 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 987 (1078)
.. .......+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||..... ..... .......+... .
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~--~~~~~---~~~~~~~~~~~---~ 230 (269)
T 4hcu_A 159 DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN--SEVVE---DISTGFRLYKP---R 230 (269)
T ss_dssp HHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHH---HHHTTCCCCCC---T
T ss_pred cccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCH--HHHHH---HHhcCccCCCC---C
Confidence 21 12233456788999999999999999999999999999999 9999754322 11111 11111111111 1
Q ss_pred ccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhh
Q 039595 988 GVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGY 1024 (1078)
Q Consensus 988 ~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~ 1024 (1078)
.. ...+.+++.+||+.||++|||++|+++|....
T Consensus 231 ~~---~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l 264 (269)
T 4hcu_A 231 LA---STHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 264 (269)
T ss_dssp TS---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cC---CHHHHHHHHHHccCCcccCcCHHHHHHHHHHH
Confidence 11 23577899999999999999999999987644
No 122
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=2.8e-39 Score=357.15 Aligned_cols=261 Identities=23% Similarity=0.284 Sum_probs=207.4
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccC--ChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCee
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSG--NMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHS 826 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 826 (1078)
.++|++.+.||+|+||.||+|... +++.||+|++....... .....+.+.+|+.++++++||||+++++++.++...
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 357999999999999999999765 78999999997654322 122467899999999999999999999999999999
Q ss_pred EEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCC----cEEEeccc
Q 039595 827 FLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEF----EAHVSDFG 902 (1078)
Q Consensus 827 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~----~~kl~DfG 902 (1078)
++||||+++++|.+++.. ...+++.+++.++.||+.||+|||++ +++||||||+||+++.++ .+||+|||
T Consensus 84 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg 157 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAE---KESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFG 157 (283)
T ss_dssp EEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEeecCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecc
Confidence 999999999999999943 35689999999999999999999999 999999999999998887 89999999
Q ss_pred ccccccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCC
Q 039595 903 IAKFVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRL 982 (1078)
Q Consensus 903 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 982 (1078)
.+....... ......|++.|+|||.+.+..++.++||||||+++|+|++|+.||...... ..... +.....
T Consensus 158 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~------~~~~~~ 228 (283)
T 3bhy_A 158 IAHKIEAGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ--ETLTN------ISAVNY 228 (283)
T ss_dssp TCEECC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHH------HHTTCC
T ss_pred cceeccCCC-cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH--HHHHH------hHhccc
Confidence 998765422 234457899999999999999999999999999999999999997543221 11111 111111
Q ss_pred CCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 983 STPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 983 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
.............+.+++.+||+.||++|||++|+++|+|+..
T Consensus 229 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~ 271 (283)
T 3bhy_A 229 DFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKA 271 (283)
T ss_dssp CCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHH
T ss_pred CCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHH
Confidence 1000000011235788999999999999999999999999764
No 123
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=368.83 Aligned_cols=252 Identities=23% Similarity=0.301 Sum_probs=207.7
Q ss_pred hhcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCC----hhhHHHHHHHHHHHhcCCCCceeeEEeeeecC
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGN----MADQDEFLNVVLALNEIRHRNIVKFHGFCSNA 823 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 823 (1078)
..++|++.+.||+|+||+||+|.. .+++.||||++........ ....+.+.+|+.++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 457899999999999999999965 5789999999976543211 11234567899999999999999999999999
Q ss_pred CeeEEEEeecCCC-CHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccc
Q 039595 824 RHSFLVCEYLHRG-SLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFG 902 (1078)
Q Consensus 824 ~~~~lv~E~~~~g-~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 902 (1078)
+..++||||+.+| +|.+++.. ...+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg 175 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDR---HPRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFG 175 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHT---CCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCT
T ss_pred CEEEEEEEeCCCCccHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecc
Confidence 9999999999777 99999954 34589999999999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCCceeeccccccccccccccCCC-CccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCC
Q 039595 903 IAKFVEPYSSNRTEFVGTFGYAAPEIAYTMRA-TEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPR 981 (1078)
Q Consensus 903 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 981 (1078)
+++..... .......||+.|+|||++.+..+ +.++|||||||++|||++|+.||...... ....
T Consensus 176 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------------~~~~ 240 (335)
T 3dls_A 176 SAAYLERG-KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET--------------VEAA 240 (335)
T ss_dssp TCEECCTT-CCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG--------------TTTC
T ss_pred cceECCCC-CceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH--------------Hhhc
Confidence 99876543 33445689999999999988776 88999999999999999999997532111 1111
Q ss_pred CCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 982 LSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 982 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
...+ ... ...+.+++.+||++||++|||++|+++|+|+..
T Consensus 241 ~~~~-~~~---~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~ 280 (335)
T 3dls_A 241 IHPP-YLV---SKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQ 280 (335)
T ss_dssp CCCS-SCC---CHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTC
T ss_pred cCCC-ccc---CHHHHHHHHHHccCChhhCcCHHHHhcCccccC
Confidence 1111 111 125788999999999999999999999999754
No 124
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=3.1e-39 Score=369.86 Aligned_cols=266 Identities=25% Similarity=0.364 Sum_probs=211.2
Q ss_pred HHHHHhhcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCCh----hhHHHHHHHHHHHhcC-CCCceeeEE
Q 039595 744 EEIIKATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNM----ADQDEFLNVVLALNEI-RHRNIVKFH 817 (1078)
Q Consensus 744 ~~~~~~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~----~~~~~~~~e~~~l~~l-~h~niv~l~ 817 (1078)
+......++|++.+.||+|+||.||+|..+ +|+.||||++......... ...+.+.+|+.+++++ +||||++++
T Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 166 (365)
T 2y7j_A 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI 166 (365)
T ss_dssp HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 344455678999999999999999999775 7999999998764322111 1245678899999999 899999999
Q ss_pred eeeecCCeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEE
Q 039595 818 GFCSNARHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAH 897 (1078)
Q Consensus 818 ~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~k 897 (1078)
+++......++||||+++|+|.+++.. ...+++..+..++.||+.||.|||+. ||+||||||+||+++.++.+|
T Consensus 167 ~~~~~~~~~~lv~e~~~g~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ik 240 (365)
T 2y7j_A 167 DSYESSSFMFLVFDLMRKGELFDYLTE---KVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIR 240 (365)
T ss_dssp EEEEBSSEEEEEECCCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEE
T ss_pred EEEeeCCEEEEEEEeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEE
Confidence 999999999999999999999999943 35689999999999999999999999 999999999999999999999
Q ss_pred EecccccccccCCCCCceeecccccccccccccc------CCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhh
Q 039595 898 VSDFGIAKFVEPYSSNRTEFVGTFGYAAPEIAYT------MRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMI 971 (1078)
Q Consensus 898 l~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~ 971 (1078)
|+|||++...... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ......
T Consensus 241 l~DfG~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~--~~~~~~- 316 (365)
T 2y7j_A 241 LSDFGFSCHLEPG-EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ--ILMLRM- 316 (365)
T ss_dssp ECCCTTCEECCTT-CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHH-
T ss_pred EEecCcccccCCC-cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH--HHHHHH-
Confidence 9999999877543 23345689999999999863 3578899999999999999999999753221 111111
Q ss_pred hhhhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhh
Q 039595 972 IEVNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGY 1024 (1078)
Q Consensus 972 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~ 1024 (1078)
+.........+........+.+++.+||+.||++|||++|+++|||+.
T Consensus 317 -----i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~ 364 (365)
T 2y7j_A 317 -----IMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE 364 (365)
T ss_dssp -----HHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGC
T ss_pred -----HHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccC
Confidence 111111111110011123578899999999999999999999999975
No 125
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=2.3e-39 Score=365.50 Aligned_cols=270 Identities=20% Similarity=0.244 Sum_probs=211.5
Q ss_pred ccHHHHHHhhcCCCcc-ceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcC-CCCceeeEE
Q 039595 741 IMHEEIIKATDDFDEK-FCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEI-RHRNIVKFH 817 (1078)
Q Consensus 741 ~~~~~~~~~~~~~~~~-~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~ 817 (1078)
..++......++|.+. +.||+|+||+||+|..+ +++.||+|++..... .......+.+|+.+++.+ .||||++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~iv~~~ 95 (327)
T 3lm5_A 18 LYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRR--GQDCRAEILHEIAVLELAKSCPRVINLH 95 (327)
T ss_dssp CCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEET--TEECHHHHHHHHHHHHHTTTCTTBCCEE
T ss_pred hHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhc--chHHHHHHHHHHHHHHhccCCCCEEEEE
Confidence 3445555667778887 88999999999999665 699999999976542 233467788999999999 569999999
Q ss_pred eeeecCCeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCC---CC
Q 039595 818 GFCSNARHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDL---EF 894 (1078)
Q Consensus 818 ~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~---~~ 894 (1078)
+++.+.+..++||||+++|+|.+++... ....+++.+++.++.|++.||+|||++ +|+||||||+||+++. ++
T Consensus 96 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~ 171 (327)
T 3lm5_A 96 EVYENTSEIILILEYAAGGEIFSLCLPE-LAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLG 171 (327)
T ss_dssp EEEECSSEEEEEEECCTTEEGGGGGSSC-C-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBC
T ss_pred EEEEeCCeEEEEEEecCCCcHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCC
Confidence 9999999999999999999999998442 345689999999999999999999999 9999999999999998 78
Q ss_pred cEEEecccccccccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhh
Q 039595 895 EAHVSDFGIAKFVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEV 974 (1078)
Q Consensus 895 ~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~ 974 (1078)
.+||+|||+++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+
T Consensus 172 ~~kL~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i--- 245 (327)
T 3lm5_A 172 DIKIVDFGMSRKIGHAC-ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQ--ETYLNI--- 245 (327)
T ss_dssp CEEECCGGGCEEC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHH---
T ss_pred cEEEeeCccccccCCcc-ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch--HHHHHH---
Confidence 99999999998765422 234567999999999999999999999999999999999999997543221 111111
Q ss_pred hhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 975 NQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 975 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
............. .....+.+++.+||+.||++|||++|+++|+|+..
T Consensus 246 ~~~~~~~~~~~~~---~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~ 293 (327)
T 3lm5_A 246 SQVNVDYSEETFS---SVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQ 293 (327)
T ss_dssp HHTCCCCCTTTTT---TSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCC
T ss_pred HhcccccCchhhc---ccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhcc
Confidence 1111111111111 11235778899999999999999999999999764
No 126
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.1e-38 Score=356.04 Aligned_cols=255 Identities=25% Similarity=0.380 Sum_probs=212.1
Q ss_pred hcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
.+.|+..+.||+|+||.||+|.. .+++.||||++..... ....+.+.+|+.++++++||||+++++++.++...++
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 97 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA---EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWI 97 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC---STTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccccc---HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEE
Confidence 45799999999999999999965 4789999999976532 2346778999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVE 908 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~ 908 (1078)
||||+++++|.+++.. ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+....
T Consensus 98 v~e~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 170 (303)
T 3a7i_A 98 IMEYLGGGSALDLLEP----GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLT 170 (303)
T ss_dssp EEECCTTEEHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECB
T ss_pred EEEeCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecC
Confidence 9999999999999943 4689999999999999999999999 99999999999999999999999999998776
Q ss_pred CCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCCCc
Q 039595 909 PYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSPG 988 (1078)
Q Consensus 909 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1078)
..........|++.|+|||.+.+..++.++||||||+++|||++|+.||...... ... ........+.... .
T Consensus 171 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~---~~~~~~~~~~~~~---~ 242 (303)
T 3a7i_A 171 DTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM--KVL---FLIPKNNPPTLEG---N 242 (303)
T ss_dssp TTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHH---HHHHHSCCCCCCS---S
T ss_pred ccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH--HHH---HHhhcCCCCCCcc---c
Confidence 5444455668999999999999999999999999999999999999997533221 111 1111111122211 1
Q ss_pred cHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 989 VMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 989 ~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
.. ..+.+++.+||+.||++|||++|+++|+|+..
T Consensus 243 ~~---~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~ 276 (303)
T 3a7i_A 243 YS---KPLKEFVEACLNKEPSFRPTAKELLKHKFILR 276 (303)
T ss_dssp CC---HHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHH
T ss_pred cC---HHHHHHHHHHcCCChhhCcCHHHHhhChhhhc
Confidence 11 25778999999999999999999999999754
No 127
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=5.2e-39 Score=372.06 Aligned_cols=256 Identities=21% Similarity=0.239 Sum_probs=194.4
Q ss_pred hcCCCcc-ceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHH-hcCCCCceeeEEeeeec----
Q 039595 750 TDDFDEK-FCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLAL-NEIRHRNIVKFHGFCSN---- 822 (1078)
Q Consensus 750 ~~~~~~~-~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~---- 822 (1078)
.++|.+. +.||+|+||+||+|..+ +|+.||||++... ..+.+|+.++ +..+||||+++++++..
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~---------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~ 130 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC---------PKARREVELHWRASQCPHIVRIVDVYENLYAG 130 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS---------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc---------hhHHHHHHHHHHhcCCCCcceEeEEEeecccC
Confidence 3567776 68999999999999654 7899999998532 3456777776 45589999999999865
Q ss_pred CCeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCC---CCcEEEe
Q 039595 823 ARHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDL---EFEAHVS 899 (1078)
Q Consensus 823 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~kl~ 899 (1078)
....|+||||+++|+|.+++... ....+++.++..++.||+.||+|||+. +|+||||||+|||++. ++.+||+
T Consensus 131 ~~~~~lv~E~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~ 206 (400)
T 1nxk_A 131 RKCLLIVMECLDGGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLT 206 (400)
T ss_dssp EEEEEEEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEEC
T ss_pred CcEEEEEEEeCCCCcHHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEE
Confidence 56789999999999999999643 234689999999999999999999999 9999999999999998 7899999
Q ss_pred cccccccccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccc--cchhhhhhhhhhh
Q 039595 900 DFGIAKFVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINF--SSFSNMIIEVNQI 977 (1078)
Q Consensus 900 DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~--~~~~~~~~~~~~~ 977 (1078)
|||+++..... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||....... ......+..
T Consensus 207 DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~---- 281 (400)
T 1nxk_A 207 DFGFAKETTSH-NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM---- 281 (400)
T ss_dssp CCTTCEECC------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHH----
T ss_pred ecccccccCCC-CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHc----
Confidence 99999866432 23345688999999999999999999999999999999999999975433211 111111111
Q ss_pred cCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 978 LDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 978 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
..+..+.+.......++.+++.+||+.||++|||++|+++|+|+..
T Consensus 282 --~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~ 327 (400)
T 1nxk_A 282 --GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 327 (400)
T ss_dssp --TCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHT
T ss_pred --CcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccC
Confidence 1111111111112236788999999999999999999999999864
No 128
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=4.8e-39 Score=353.90 Aligned_cols=259 Identities=24% Similarity=0.293 Sum_probs=209.8
Q ss_pred hhcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeE
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSF 827 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 827 (1078)
..++|++.+.||+|+||.||+|... +++.||||++.... .....+.+.+|+.+++.++||||+++++++.++...+
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR---AVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY 81 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGG---CTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeecc---chhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEE
Confidence 3468999999999999999999765 78999999986543 2234577899999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccccc
Q 039595 828 LVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFV 907 (1078)
Q Consensus 828 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~ 907 (1078)
+||||+++|+|.+++.. ...+++.+++.++.|++.||+|||++ +++||||||+||+++.++.+||+|||.+...
T Consensus 82 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 155 (276)
T 2yex_A 82 LFLEYCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVF 155 (276)
T ss_dssp EEEECCTTEEGGGGSBT---TTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEecCCCcHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCcccc
Confidence 99999999999999843 35689999999999999999999999 9999999999999999999999999999866
Q ss_pred cCCC--CCceeeccccccccccccccCCC-CccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCC
Q 039595 908 EPYS--SNRTEFVGTFGYAAPEIAYTMRA-TEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLST 984 (1078)
Q Consensus 908 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 984 (1078)
.... .......|++.|+|||.+.+..+ +.++||||+|+++|||++|+.||+............. . ......
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~----~--~~~~~~ 229 (276)
T 2yex_A 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK----E--KKTYLN 229 (276)
T ss_dssp EETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHH----T--TCTTST
T ss_pred CCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhh----h--cccccC
Confidence 4322 22345678999999999987665 7899999999999999999999864433211111110 0 011111
Q ss_pred CCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 985 PSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 985 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
.. ......+.+++.+||+.||++|||++|+++|+|+..
T Consensus 230 ~~---~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~ 267 (276)
T 2yex_A 230 PW---KKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 267 (276)
T ss_dssp TG---GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTC
T ss_pred ch---hhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccC
Confidence 11 112235778999999999999999999999999764
No 129
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=2.6e-39 Score=363.68 Aligned_cols=266 Identities=19% Similarity=0.249 Sum_probs=200.9
Q ss_pred hcCCCcc-ceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcC-CCCceeeEEeeeecCCee
Q 039595 750 TDDFDEK-FCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEI-RHRNIVKFHGFCSNARHS 826 (1078)
Q Consensus 750 ~~~~~~~-~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 826 (1078)
.++|++. +.||+|+||+||+|.. .+++.||||++.... ....+.+.+|+.++.++ +||||+++++++.+++..
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~ 86 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP----GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRF 86 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS----SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc----chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEE
Confidence 3578874 7899999999999975 479999999997542 23466788999999885 799999999999999999
Q ss_pred EEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCc---EEEecccc
Q 039595 827 FLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFE---AHVSDFGI 903 (1078)
Q Consensus 827 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~---~kl~DfG~ 903 (1078)
++||||+++|+|.+++.. ...+++.++..++.||+.||+|||++ +|+||||||+||+++.++. +||+|||+
T Consensus 87 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~ 160 (316)
T 2ac3_A 87 YLVFEKMRGGSILSHIHK---RRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDL 160 (316)
T ss_dssp EEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTC
T ss_pred EEEEEcCCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccC
Confidence 999999999999999953 34689999999999999999999999 9999999999999998776 99999999
Q ss_pred cccccCCCC-------Cceeecccccccccccccc-----CCCCccchhHHHHHHHHHHHhCCCCCCcccccccchh---
Q 039595 904 AKFVEPYSS-------NRTEFVGTFGYAAPEIAYT-----MRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFS--- 968 (1078)
Q Consensus 904 a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~--- 968 (1078)
+........ ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~ 240 (316)
T 2ac3_A 161 GSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGE 240 (316)
T ss_dssp CC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----
T ss_pred ccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccc
Confidence 986542211 1224569999999999875 5688999999999999999999999864332110000
Q ss_pred ---h-hhhhhhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 969 ---N-MIIEVNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 969 ---~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
. .......+.......+..........+.+++.+||+.||++|||++|+++|+|+..
T Consensus 241 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~ 301 (316)
T 2ac3_A 241 ACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQG 301 (316)
T ss_dssp CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC-
T ss_pred cchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcC
Confidence 0 00001111111111111000111236789999999999999999999999999764
No 130
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=6.7e-39 Score=357.58 Aligned_cols=255 Identities=27% Similarity=0.392 Sum_probs=195.3
Q ss_pred hcCCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhc--CCCCceeeEEeeeec----C
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNE--IRHRNIVKFHGFCSN----A 823 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~----~ 823 (1078)
.++|++.+.||+|+||+||+|+. +++.||||++... ..+.+..|.+++.. ++||||+++++++.. .
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-------~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~ 78 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR-------DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSS 78 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG-------GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc-------cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCC
Confidence 46899999999999999999987 5899999998543 23445556555555 799999999998643 3
Q ss_pred CeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHH--------hcCCCCcEecCCCCCCeeeCCCCc
Q 039595 824 RHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLH--------HDCLPSIIHRDISSKNVLLDLEFE 895 (1078)
Q Consensus 824 ~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~ivH~Dlk~~NIll~~~~~ 895 (1078)
...++||||+++|+|.++++. ..+++..++.++.|++.||+||| +. +|+||||||+||+++.++.
T Consensus 79 ~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~ 151 (301)
T 3q4u_A 79 TQLWLITHYHEMGSLYDYLQL----TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQ 151 (301)
T ss_dssp EEEEEEECCCTTCBHHHHHTT----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSC
T ss_pred ceeEEehhhccCCCHHHHHhh----cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCC
Confidence 568999999999999999932 46899999999999999999999 77 9999999999999999999
Q ss_pred EEEecccccccccCCCCC----ceeeccccccccccccccC------CCCccchhHHHHHHHHHHHhC----------CC
Q 039595 896 AHVSDFGIAKFVEPYSSN----RTEFVGTFGYAAPEIAYTM------RATEKYDVYSFGVLVFEVIKG----------NH 955 (1078)
Q Consensus 896 ~kl~DfG~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~sDvwSlG~il~elltG----------~~ 955 (1078)
+||+|||+++........ .....||+.|+|||++.+. .++.++|||||||++|||++| +.
T Consensus 152 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~ 231 (301)
T 3q4u_A 152 CCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKP 231 (301)
T ss_dssp EEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccc
Confidence 999999999876543322 2334799999999999876 455799999999999999999 77
Q ss_pred CCCcccccccchhhhhhhhhhhcCCCCCCCCC--ccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHh
Q 039595 956 PRDFFSINFSSFSNMIIEVNQILDPRLSTPSP--GVMDKLISIMEVAILCLDESPEARPTMEKGFGHH 1021 (1078)
Q Consensus 956 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~ 1021 (1078)
||............. .... ........... ........+.+++.+||+.||++|||++|+++..
T Consensus 232 pf~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L 297 (301)
T 3q4u_A 232 PFYDVVPNDPSFEDM-RKVV-CVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTL 297 (301)
T ss_dssp TTTTTSCSSCCHHHH-HHHH-TTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHH
T ss_pred cccccCCCCcchhhh-hHHH-hccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHH
Confidence 754332221111111 1111 11111111111 1123455789999999999999999999998764
No 131
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.4e-38 Score=355.38 Aligned_cols=260 Identities=24% Similarity=0.358 Sum_probs=202.7
Q ss_pred hcCCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFLV 829 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 829 (1078)
.++|++.+.||+|+||+||+|... ..+|+|+++... ......+.+.+|+.++++++||||+++++++.. +..++|
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv 109 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVD--PTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIV 109 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSS--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCC--CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEEE
Confidence 468999999999999999999864 469999887542 234556789999999999999999999998764 558999
Q ss_pred EeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccccccC
Q 039595 830 CEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVEP 909 (1078)
Q Consensus 830 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~~ 909 (1078)
|||+++|+|.+++... ...+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 110 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~ 184 (307)
T 3lb7_A 110 TQWCEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp EECCSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC---
T ss_pred EecCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceeccc
Confidence 9999999999999543 45689999999999999999999999 999999999999999999999999999986543
Q ss_pred C--CCCceeeccccccccccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCC
Q 039595 910 Y--SSNRTEFVGTFGYAAPEIAY---TMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLST 984 (1078)
Q Consensus 910 ~--~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 984 (1078)
. ........||+.|+|||++. +..++.++|||||||++|||++|+.||....... ..... .......+....
T Consensus 185 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~-~~~~~--~~~~~~~~~~~~ 261 (307)
T 3lb7_A 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD-QIIFM--VGRGYASPDLSK 261 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-HHHHH--HHHTCCCCCSTT
T ss_pred ccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHH-HHHHH--HhcCCCCcchhh
Confidence 2 22234567999999999986 5678999999999999999999999976433211 11111 111122232222
Q ss_pred CCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 985 PSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 985 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
...... ..+.+++.+||+.||++||+++|++++++...
T Consensus 262 ~~~~~~---~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~ 299 (307)
T 3lb7_A 262 LYKNCP---KAMKRLVADCVKKVKEERPLFPQILSSIELLQ 299 (307)
T ss_dssp SCSSSC---HHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHH
T ss_pred hhcCCc---HHHHHHHHHHhhCChhhCcCHHHHHHHHHHHH
Confidence 222222 35778899999999999999999999987543
No 132
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=2.3e-39 Score=386.24 Aligned_cols=259 Identities=24% Similarity=0.352 Sum_probs=212.2
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
.++|++.+.||+|+||+||+|..+ +|+.||||++...... .....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVK-QKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-BSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcc-cchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 467999999999999999999765 7999999999765432 23456789999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeee---CCCCcEEEecccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLL---DLEFEAHVSDFGIAK 905 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~kl~DfG~a~ 905 (1078)
||||+.+|+|.+++.. ...+++.+++.++.||+.||+|||++ +|+||||||+||++ +.++.+||+|||+++
T Consensus 104 v~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 177 (484)
T 3nyv_A 104 VGEVYTGGELFDEIIS---RKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLST 177 (484)
T ss_dssp EECCCCSCBHHHHHHT---CSCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred EEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence 9999999999999843 35689999999999999999999999 99999999999999 567899999999998
Q ss_pred cccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCC
Q 039595 906 FVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTP 985 (1078)
Q Consensus 906 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 985 (1078)
..... .......||+.|+|||++.+ .++.++||||+||++|+|++|++||..... ...... +........
T Consensus 178 ~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~------i~~~~~~~~ 247 (484)
T 3nyv_A 178 HFEAS-KKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE--YDILKK------VEKGKYTFE 247 (484)
T ss_dssp HBCCC-CSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHH------HHHCCCCCC
T ss_pred Ecccc-cccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH--HHHHHH------HHcCCCCCC
Confidence 77543 23445679999999999876 699999999999999999999999754322 111111 111122212
Q ss_pred CCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 986 SPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 986 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
.+........+.+++.+||+.||++|||++|+++|||+..
T Consensus 248 ~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~ 287 (484)
T 3nyv_A 248 LPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQT 287 (484)
T ss_dssp SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHH
T ss_pred CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhcc
Confidence 2222223346789999999999999999999999999763
No 133
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=4.5e-39 Score=352.51 Aligned_cols=255 Identities=25% Similarity=0.405 Sum_probs=207.5
Q ss_pred hcCCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFLV 829 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 829 (1078)
.++|++.+.||+|+||.||+|+.+++..||+|++.... ...+++.+|+.++++++||||+++++++.++...++|
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-----MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIV 81 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-----BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-----CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEE
Confidence 46899999999999999999998888899999986542 2356789999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccccccC
Q 039595 830 CEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVEP 909 (1078)
Q Consensus 830 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~~ 909 (1078)
|||+++|+|.+++... ...+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+.....
T Consensus 82 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 156 (268)
T 3sxs_A 82 TEYISNGCLLNYLRSH--GKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD 156 (268)
T ss_dssp EECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCT
T ss_pred EEccCCCcHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecch
Confidence 9999999999999542 34589999999999999999999999 999999999999999999999999999987644
Q ss_pred CCC-CceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccchhhhhhhhhhhcCCCCCCCCC
Q 039595 910 YSS-NRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSP 987 (1078)
Q Consensus 910 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 987 (1078)
... ......+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||+..... .... ..........+ .
T Consensus 157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~---~~~~~~~~~~~---~ 228 (268)
T 3sxs_A 157 DQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS--EVVL---KVSQGHRLYRP---H 228 (268)
T ss_dssp TCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHH---HHHTTCCCCCC---T
T ss_pred hhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH--HHHH---HHHcCCCCCCC---C
Confidence 321 1223456778999999999899999999999999999999 99997643321 1111 11111111111 1
Q ss_pred ccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 988 GVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 988 ~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
... ..+.+++.+||+.||++|||++|++++.....
T Consensus 229 ~~~---~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~ 263 (268)
T 3sxs_A 229 LAS---DTIYQIMYSCWHELPEKRPTFQQLLSSIEPLR 263 (268)
T ss_dssp TSC---HHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGC
T ss_pred cCh---HHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 111 25778999999999999999999999876543
No 134
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=5e-39 Score=368.30 Aligned_cols=262 Identities=22% Similarity=0.239 Sum_probs=206.1
Q ss_pred HhhcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCC-----CCceeeEEeeee
Q 039595 748 KATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIR-----HRNIVKFHGFCS 821 (1078)
Q Consensus 748 ~~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-----h~niv~l~~~~~ 821 (1078)
...++|++.++||+|+||+||+|.. .+++.||||++... ......+..|+.+++.+. ||||+++++++.
T Consensus 32 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~ 106 (360)
T 3llt_A 32 LLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-----KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFM 106 (360)
T ss_dssp EETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-----HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEE
T ss_pred EecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-----hhhhhhhHHHHHHHHHhcccCCCCCCeecccceee
Confidence 4467899999999999999999976 47899999998642 234556778999999886 999999999999
Q ss_pred cCCeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCC---------
Q 039595 822 NARHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDL--------- 892 (1078)
Q Consensus 822 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~--------- 892 (1078)
..+..++||||+ +++|.+++.... ...+++.++..++.||+.||+|||++ +|+||||||+||+++.
T Consensus 107 ~~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~~ 181 (360)
T 3llt_A 107 YYDHMCLIFEPL-GPSLYEIITRNN-YNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLIT 181 (360)
T ss_dssp ETTEEEEEECCC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEEE
T ss_pred ECCeeEEEEcCC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccccccc
Confidence 999999999999 889999995432 34589999999999999999999999 9999999999999975
Q ss_pred ----------------CCcEEEecccccccccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCC
Q 039595 893 ----------------EFEAHVSDFGIAKFVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 956 (1078)
Q Consensus 893 ----------------~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p 956 (1078)
++.+||+|||+++.... ......||+.|+|||++.+..++.++||||+||++|||++|+.|
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~p 258 (360)
T 3llt_A 182 VRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD---YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLL 258 (360)
T ss_dssp EECTTTCCEEEEEEESCCCEEECCCTTCEETTS---CCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCS
T ss_pred hhcccccccccccccCCCCEEEEeccCceecCC---CCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCC
Confidence 78999999999986543 23456789999999999999999999999999999999999999
Q ss_pred CCcccccccchhhhhhhhh-----------------hhcC-C----CCCCCCCccHH--------------HHHHHHHHH
Q 039595 957 RDFFSINFSSFSNMIIEVN-----------------QILD-P----RLSTPSPGVMD--------------KLISIMEVA 1000 (1078)
Q Consensus 957 ~~~~~~~~~~~~~~~~~~~-----------------~~~~-~----~~~~~~~~~~~--------------~~~~l~~li 1000 (1078)
|...... .....+.... .... . .++........ ....+.+++
T Consensus 259 f~~~~~~--~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 336 (360)
T 3llt_A 259 FRTHEHM--EHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFL 336 (360)
T ss_dssp CCCSSHH--HHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHH
T ss_pred CCCCcHH--HHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHH
Confidence 7643221 1111000000 0000 0 00000000000 013567999
Q ss_pred HhcccCCCCCCCChhHHHHHhhhh
Q 039595 1001 ILCLDESPEARPTMEKGFGHHIGY 1024 (1078)
Q Consensus 1001 ~~cl~~dP~~RPt~~ell~h~~~~ 1024 (1078)
.+||+.||++|||++|+++|+|+.
T Consensus 337 ~~~L~~dP~~Rpta~elL~hp~f~ 360 (360)
T 3llt_A 337 YSILQIDPTLRPSPAELLKHKFLE 360 (360)
T ss_dssp HHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred HHHhcCChhhCCCHHHHhcCcccC
Confidence 999999999999999999999973
No 135
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=5.1e-39 Score=355.09 Aligned_cols=257 Identities=23% Similarity=0.391 Sum_probs=206.1
Q ss_pred hhcCCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
..++|++.+.||+|+||+||+|.+.++..||+|++.... ...+++.+|+.++++++||||+++++++.++...++
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 96 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-----MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFI 96 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-----BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-----CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEE
Confidence 356899999999999999999998888899999997542 235678999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVE 908 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~ 908 (1078)
||||+++|+|.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.++...
T Consensus 97 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 171 (283)
T 3gen_A 97 ITEYMANGCLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL 171 (283)
T ss_dssp EECCCTTCBHHHHHHCG--GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBC
T ss_pred EEeccCCCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccc
Confidence 99999999999999542 34689999999999999999999999 99999999999999999999999999998654
Q ss_pred CCC-CCceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccchhhhhhhhhhhcCCCCCCCC
Q 039595 909 PYS-SNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPS 986 (1078)
Q Consensus 909 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 986 (1078)
... .......+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||...... ..... ...........
T Consensus 172 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~--~~~~~---~~~~~~~~~~~-- 244 (283)
T 3gen_A 172 DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--ETAEH---IAQGLRLYRPH-- 244 (283)
T ss_dssp CHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHHH---HHTTCCCCCCT--
T ss_pred ccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh--HHHHH---HhcccCCCCCC--
Confidence 321 11223456788999999999899999999999999999998 99997643321 11111 11111111111
Q ss_pred CccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhhh
Q 039595 987 PGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYCD 1026 (1078)
Q Consensus 987 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~~ 1026 (1078)
... ..+.+++.+||+.||++|||++|+++|......
T Consensus 245 -~~~---~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~ 280 (283)
T 3gen_A 245 -LAS---EKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280 (283)
T ss_dssp -TCC---HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -cCC---HHHHHHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence 111 257789999999999999999999999875443
No 136
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=6.6e-40 Score=367.42 Aligned_cols=260 Identities=24% Similarity=0.315 Sum_probs=200.1
Q ss_pred hcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCe---
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARH--- 825 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~--- 825 (1078)
.++|++.+.||+|+||.||+|.. .+++.||||++..... ........+.+|+.++++++||||+++++++.....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 89 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLA-RDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP 89 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTT-TSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCcccc-CCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCc
Confidence 46899999999999999999975 5789999999976532 234455678999999999999999999999865543
Q ss_pred -eEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccc
Q 039595 826 -SFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIA 904 (1078)
Q Consensus 826 -~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a 904 (1078)
.|+||||+++|+|.+++.. ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 90 ~~~lv~e~~~g~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a 163 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVHT---EGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIA 163 (311)
T ss_dssp EEEEEEECCCEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC
T ss_pred ccEEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCc
Confidence 4999999999999999943 34689999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCC---CceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCC
Q 039595 905 KFVEPYSS---NRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPR 981 (1078)
Q Consensus 905 ~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 981 (1078)
+....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..... .....
T Consensus 164 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~--~~~~~------~~~~~ 235 (311)
T 3ork_A 164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV--SVAYQ------HVRED 235 (311)
T ss_dssp ------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHH------HHHCC
T ss_pred ccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH--HHHHH------HhcCC
Confidence 87654322 223457899999999999999999999999999999999999997543221 11111 00011
Q ss_pred CCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhh
Q 039595 982 LSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGY 1024 (1078)
Q Consensus 982 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~ 1024 (1078)
...+.........++.+++.+||+.||++||++.+++.|+|..
T Consensus 236 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 278 (311)
T 3ork_A 236 PIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR 278 (311)
T ss_dssp CCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred CCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHH
Confidence 1000000001123577899999999999999999999999854
No 137
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=4.5e-39 Score=357.32 Aligned_cols=259 Identities=23% Similarity=0.308 Sum_probs=199.5
Q ss_pred hcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
.++|++.+.||+|+||.||+|.. .+++.||+|++..... ......+.+.+|+.++++++||||+++++++.+++..++
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 88 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPR-EKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYL 88 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSS-CCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCcc-ccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEE
Confidence 46799999999999999999965 4789999999865432 234456788999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVE 908 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~ 908 (1078)
||||+++|+|.+++.. ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 89 v~e~~~g~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 162 (294)
T 4eqm_A 89 VMEYIEGPTLSEYIES---HGPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALS 162 (294)
T ss_dssp EEECCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC-
T ss_pred EEeCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccc
Confidence 9999999999999943 34689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCC-CCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCCC
Q 039595 909 PYS-SNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSP 987 (1078)
Q Consensus 909 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 987 (1078)
... .......||+.|+|||.+.+..++.++||||+|+++|||++|+.||........ ..........+......+
T Consensus 163 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~~ 238 (294)
T 4eqm_A 163 ETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSI----AIKHIQDSVPNVTTDVRK 238 (294)
T ss_dssp ------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHH----HHHHHSSCCCCHHHHSCT
T ss_pred cccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH----HHHHhhccCCCcchhccc
Confidence 433 223446799999999999999999999999999999999999999764332110 000000000000000011
Q ss_pred ccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhh
Q 039595 988 GVMDKLISIMEVAILCLDESPEARPTMEKGFGHHI 1022 (1078)
Q Consensus 988 ~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~ 1022 (1078)
.. ...+.+++.+||++||++||+..+.+.+.|
T Consensus 239 ~~---~~~l~~li~~~l~~dp~~R~~~~~~l~~~l 270 (294)
T 4eqm_A 239 DI---PQSLSNVILRATEKDKANRYKTIQEMKDDL 270 (294)
T ss_dssp TS---CHHHHHHHHHHSCSSGGGSCSSHHHHHHHH
T ss_pred CC---CHHHHHHHHHHhcCCHhHccccHHHHHHHH
Confidence 11 135778999999999999995555454444
No 138
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=6.5e-39 Score=379.48 Aligned_cols=267 Identities=22% Similarity=0.285 Sum_probs=190.2
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeee-----cC
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCS-----NA 823 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-----~~ 823 (1078)
.++|++.+.||+|+||+||+|..+ +++.||||++.... ......+.+.+|+.++++++||||+++++++. ..
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 129 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVF--EDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKF 129 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTT--SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhh--cCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccC
Confidence 468999999999999999999654 78999999996542 24455678999999999999999999999983 33
Q ss_pred CeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccc
Q 039595 824 RHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGI 903 (1078)
Q Consensus 824 ~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~ 903 (1078)
...|+||||+. |+|.+++.. ...+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 130 ~~~~lv~e~~~-~~L~~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGl 202 (458)
T 3rp9_A 130 DELYVVLEIAD-SDFKKLFRT---PVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGL 202 (458)
T ss_dssp CCEEEEECCCS-EEHHHHHHS---SCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEeccc-cchhhhccc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeeccccc
Confidence 57899999985 699999843 35699999999999999999999999 999999999999999999999999999
Q ss_pred cccccCCC---------------------------CCceeecccccccccccc-ccCCCCccchhHHHHHHHHHHHh---
Q 039595 904 AKFVEPYS---------------------------SNRTEFVGTFGYAAPEIA-YTMRATEKYDVYSFGVLVFEVIK--- 952 (1078)
Q Consensus 904 a~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwSlG~il~ellt--- 952 (1078)
|+...... ......+||+.|+|||++ .+..++.++|||||||++|||++
T Consensus 203 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~ 282 (458)
T 3rp9_A 203 ARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIK 282 (458)
T ss_dssp CBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTST
T ss_pred chhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcc
Confidence 98764321 123456789999999976 46679999999999999999999
Q ss_pred --------CCCCCCccccc-----------c--c--chhhhhhhhh-----------------------hhcCCCCCCC-
Q 039595 953 --------GNHPRDFFSIN-----------F--S--SFSNMIIEVN-----------------------QILDPRLSTP- 985 (1078)
Q Consensus 953 --------G~~p~~~~~~~-----------~--~--~~~~~~~~~~-----------------------~~~~~~~~~~- 985 (1078)
|+++|...... + . .......... ..+.......
T Consensus 283 ~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (458)
T 3rp9_A 283 ENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDL 362 (458)
T ss_dssp TTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCG
T ss_pred ccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCH
Confidence 45554221100 0 0 0000000000 0000000000
Q ss_pred CCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 986 SPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 986 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
.........++.+++.+||..||++|||++|+++|||+..
T Consensus 363 ~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~ 402 (458)
T 3rp9_A 363 AERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKE 402 (458)
T ss_dssp GGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTT
T ss_pred HHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhh
Confidence 0001111336789999999999999999999999999864
No 139
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=3.9e-39 Score=353.65 Aligned_cols=252 Identities=25% Similarity=0.378 Sum_probs=191.8
Q ss_pred hcCCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFLV 829 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 829 (1078)
.++|+..+.||+|+||.||+|.+. ++.||||++............+.+.+|+.+++.++||||+++++++.+++..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 367899999999999999999875 8899999987654333344467889999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCC---cEecCCCCCCeeeCC--------CCcEEE
Q 039595 830 CEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPS---IIHRDISSKNVLLDL--------EFEAHV 898 (1078)
Q Consensus 830 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~---ivH~Dlk~~NIll~~--------~~~~kl 898 (1078)
|||+++|+|.+++. ...+++..++.++.|++.||+|||++ + |+||||||+||+++. ++.+||
T Consensus 85 ~e~~~~~~L~~~~~----~~~~~~~~~~~i~~~l~~~l~~lH~~---~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl 157 (271)
T 3dtc_A 85 MEFARGGPLNRVLS----GKRIPPDILVNWAVQIARGMNYLHDE---AIVPIIHRDLKSSNILILQKVENGDLSNKILKI 157 (271)
T ss_dssp EECCTTEEHHHHHT----SSCCCHHHHHHHHHHHHHHHHHHHHS---SSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEE
T ss_pred EEcCCCCCHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhC---CCCceeecCCchHHEEEecccccccccCcceEE
Confidence 99999999999993 34689999999999999999999999 7 999999999999986 678999
Q ss_pred ecccccccccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhc
Q 039595 899 SDFGIAKFVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQIL 978 (1078)
Q Consensus 899 ~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 978 (1078)
+|||.++...... .....||+.|+|||.+.+..++.++||||+|+++|||++|+.||....... .... ......
T Consensus 158 ~Dfg~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~~~--~~~~~~ 231 (271)
T 3dtc_A 158 TDFGLAREWHRTT--KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLA--VAYG--VAMNKL 231 (271)
T ss_dssp CCCCC---------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHH--HHHH--HHTSCC
T ss_pred ccCCccccccccc--ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHh--hhcCCC
Confidence 9999998664322 234579999999999999999999999999999999999999976433211 1010 000111
Q ss_pred CCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHh
Q 039595 979 DPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHH 1021 (1078)
Q Consensus 979 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~ 1021 (1078)
..... ... ...+.+++.+||+.||++|||++|++++.
T Consensus 232 ~~~~~---~~~---~~~~~~li~~~l~~~p~~Rps~~e~l~~L 268 (271)
T 3dtc_A 232 ALPIP---STC---PEPFAKLMEDCWNPDPHSRPSFTNILDQL 268 (271)
T ss_dssp CCCCC---TTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCC---ccc---CHHHHHHHHHHhcCCcccCcCHHHHHHHH
Confidence 11111 111 13577899999999999999999999875
No 140
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=5.3e-39 Score=382.87 Aligned_cols=259 Identities=23% Similarity=0.313 Sum_probs=208.5
Q ss_pred hhcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeE
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSF 827 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 827 (1078)
..++|++.+.||+|+||+||+|... +++.||||++...... ......+.+|+.++++++||||+++++++.+....|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 97 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK--NKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY 97 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHB--CSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEeccccc--chHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEE
Confidence 3467999999999999999999764 7999999999654322 234677899999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeC---CCCcEEEeccccc
Q 039595 828 LVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLD---LEFEAHVSDFGIA 904 (1078)
Q Consensus 828 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~---~~~~~kl~DfG~a 904 (1078)
+||||+.+|+|.+++.. ...+++.+++.++.||+.||+|||++ +|+||||||+||+++ .++.+||+|||++
T Consensus 98 lv~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a 171 (486)
T 3mwu_A 98 IVGELYTGGELFDEIIK---RKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (486)
T ss_dssp EEECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCT
T ss_pred EEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcC
Confidence 99999999999998843 35689999999999999999999999 999999999999995 4568999999999
Q ss_pred ccccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCC
Q 039595 905 KFVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLST 984 (1078)
Q Consensus 905 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 984 (1078)
+..... ......+||+.|+|||++.+ .++.++||||+||++|+|++|+.||..... ......+ .......
T Consensus 172 ~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~i------~~~~~~~ 241 (486)
T 3mwu_A 172 TCFQQN-TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE--YDILKRV------ETGKYAF 241 (486)
T ss_dssp TTBCCC-----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH------HHTCCCS
T ss_pred eECCCC-CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHH------HhCCCCC
Confidence 876543 23445679999999999876 599999999999999999999999753221 1111111 1111211
Q ss_pred CCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 985 PSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 985 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
..+........+.+++.+||+.||++|||++|+++|||+..
T Consensus 242 ~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~ 282 (486)
T 3mwu_A 242 DLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQK 282 (486)
T ss_dssp CSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHH
T ss_pred CCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhcc
Confidence 22222222346789999999999999999999999999763
No 141
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=8.2e-39 Score=360.44 Aligned_cols=254 Identities=23% Similarity=0.394 Sum_probs=202.1
Q ss_pred hcCCCccceeccCCceeEEEEEeC----CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCe
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP----SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARH 825 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 825 (1078)
.++|++.+.||+|+||+||+|... .+..||||++.... .....+.+.+|+.++++++||||+++++++.+++.
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 124 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY---TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRL 124 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGC
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCc
Confidence 457889999999999999999764 34469999997542 34456789999999999999999999999999999
Q ss_pred eEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccc
Q 039595 826 SFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAK 905 (1078)
Q Consensus 826 ~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~ 905 (1078)
.++||||+++|+|.++++.. ...+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 199 (325)
T 3kul_A 125 AMIVTEYMENGSLDTFLRTH--DGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSR 199 (325)
T ss_dssp CEEEEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCE
T ss_pred cEEEeeCCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCccc
Confidence 99999999999999999543 34689999999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCCC---ceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccchhhhhhhhhhhcCCC
Q 039595 906 FVEPYSSN---RTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSINFSSFSNMIIEVNQILDPR 981 (1078)
Q Consensus 906 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 981 (1078)
........ .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .... .........
T Consensus 200 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~---~~~~~~~~~ 274 (325)
T 3kul_A 200 VLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR--DVIS---SVEEGYRLP 274 (325)
T ss_dssp ECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH--HHHH---HHHTTCCCC
T ss_pred ccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH--HHHH---HHHcCCCCC
Confidence 77543222 223346778999999998899999999999999999999 99997533221 1111 111111111
Q ss_pred CCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhh
Q 039595 982 LSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHI 1022 (1078)
Q Consensus 982 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~ 1022 (1078)
.. ... ...+.+++.+||+.||++|||++|+++..-
T Consensus 275 ~~---~~~---~~~l~~li~~~l~~dp~~Rps~~eil~~L~ 309 (325)
T 3kul_A 275 AP---MGC---PHALHQLMLDCWHKDRAQRPRFSQIVSVLD 309 (325)
T ss_dssp CC---TTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CC---CCc---CHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 11 111 235778899999999999999999987654
No 142
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=5.1e-39 Score=361.91 Aligned_cols=264 Identities=27% Similarity=0.347 Sum_probs=203.0
Q ss_pred hcCCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCC----e
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNAR----H 825 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~ 825 (1078)
.++|++.+.||+|+||+||+|+.. ++.||||++... ......+..|+.++++++||||+++++++.... .
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 96 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQ-----DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVD 96 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecC-----chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCce
Confidence 468999999999999999999876 789999998643 223445667899999999999999999997643 4
Q ss_pred eEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcC-------CCCcEecCCCCCCeeeCCCCcEEE
Q 039595 826 SFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDC-------LPSIIHRDISSKNVLLDLEFEAHV 898 (1078)
Q Consensus 826 ~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-------~~~ivH~Dlk~~NIll~~~~~~kl 898 (1078)
.++||||+++|+|.++++. ..+++.+++.++.|++.||+|||+.. .++|+||||||+||+++.++.+||
T Consensus 97 ~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL 172 (322)
T 3soc_A 97 LWLITAFHEKGSLSDFLKA----NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACI 172 (322)
T ss_dssp EEEEEECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEE
T ss_pred EEEEEecCCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEE
Confidence 6999999999999999943 34899999999999999999999751 238999999999999999999999
Q ss_pred ecccccccccCCCCC--ceeecccccccccccccc-----CCCCccchhHHHHHHHHHHHhCCCCCCcccccccc-hh--
Q 039595 899 SDFGIAKFVEPYSSN--RTEFVGTFGYAAPEIAYT-----MRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSS-FS-- 968 (1078)
Q Consensus 899 ~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~-~~-- 968 (1078)
+|||+++........ .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......... +.
T Consensus 173 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 252 (322)
T 3soc_A 173 ADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEE 252 (322)
T ss_dssp CCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHH
T ss_pred ccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhh
Confidence 999999876543322 334679999999999886 35567899999999999999999997643322110 00
Q ss_pred -----hhhhhhhhhcCCCCCCCCCc---cHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhh
Q 039595 969 -----NMIIEVNQILDPRLSTPSPG---VMDKLISIMEVAILCLDESPEARPTMEKGFGHHIG 1023 (1078)
Q Consensus 969 -----~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~ 1023 (1078)
...............+..+. .......+.+++.+||+.||++|||++|+++....
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 315 (322)
T 3soc_A 253 IGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQ 315 (322)
T ss_dssp HCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred hccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 00011111111222211111 12334568899999999999999999999987653
No 143
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.9e-39 Score=369.25 Aligned_cols=260 Identities=24% Similarity=0.334 Sum_probs=207.2
Q ss_pred hcCCCccceeccCCceeEEEEEeC------CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecC
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP------SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNA 823 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 823 (1078)
.++|++.+.||+|+||+||+|.+. +++.||||++.... .......+.+|+.++++++||||+++++++.++
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~ 146 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC---SEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 146 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccccc---ChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence 467999999999999999999743 46689999986432 334456788999999999999999999999999
Q ss_pred CeeEEEEeecCCCCHHHHhcCCC----CCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCC---cE
Q 039595 824 RHSFLVCEYLHRGSLARILGNDA----TAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEF---EA 896 (1078)
Q Consensus 824 ~~~~lv~E~~~~g~L~~~l~~~~----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~---~~ 896 (1078)
...++||||+++|+|.+++.... ....+++.+++.++.||+.||+|||++ +|+||||||+|||++.++ .+
T Consensus 147 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~ 223 (367)
T 3l9p_A 147 LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVA 223 (367)
T ss_dssp SSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCE
T ss_pred CCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceE
Confidence 99999999999999999995432 224589999999999999999999999 999999999999999555 59
Q ss_pred EEecccccccccCC--CCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccchhhhhhh
Q 039595 897 HVSDFGIAKFVEPY--SSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSINFSSFSNMIIE 973 (1078)
Q Consensus 897 kl~DfG~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~~~~~~~~~~~ 973 (1078)
||+|||+++..... ........||+.|+|||++.+..++.++|||||||++|||++ |+.||..... ......+
T Consensus 224 kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~--~~~~~~i-- 299 (367)
T 3l9p_A 224 KIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFV-- 299 (367)
T ss_dssp EECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHHHHH--
T ss_pred EECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHH--
Confidence 99999999865322 222344578999999999999999999999999999999998 9999753322 1111111
Q ss_pred hhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhhh
Q 039595 974 VNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYCD 1026 (1078)
Q Consensus 974 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~~ 1026 (1078)
............. ..+.+++.+||+.||++|||++|++++++....
T Consensus 300 ----~~~~~~~~~~~~~---~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~ 345 (367)
T 3l9p_A 300 ----TSGGRMDPPKNCP---GPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 345 (367)
T ss_dssp ----HTTCCCCCCTTCC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----HcCCCCCCCccCC---HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhh
Confidence 1111111111122 257788999999999999999999999886544
No 144
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=2.5e-39 Score=370.77 Aligned_cols=265 Identities=23% Similarity=0.342 Sum_probs=209.2
Q ss_pred HHHHHHhhcCCCccceeccCCceeEEEEEe------CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcC-CCCceee
Q 039595 743 HEEIIKATDDFDEKFCIGKGGQGSVYKAEL------PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEI-RHRNIVK 815 (1078)
Q Consensus 743 ~~~~~~~~~~~~~~~~lG~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~ 815 (1078)
..++....++|++.+.||+|+||.||+|.+ .+++.||||++.... .....+.+.+|+.+++++ +||||++
T Consensus 14 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hpniv~ 90 (359)
T 3vhe_A 14 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHLNVVN 90 (359)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred cccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC---CHHHHHHHHHHHHHHHhhcCCcceee
Confidence 455556678999999999999999999963 246789999997542 334456789999999999 7999999
Q ss_pred EEeeeecCC-eeEEEEeecCCCCHHHHhcCCCC-----------------------------------------------
Q 039595 816 FHGFCSNAR-HSFLVCEYLHRGSLARILGNDAT----------------------------------------------- 847 (1078)
Q Consensus 816 l~~~~~~~~-~~~lv~E~~~~g~L~~~l~~~~~----------------------------------------------- 847 (1078)
+++++.+.+ ..++||||+++|+|.++++....
T Consensus 91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (359)
T 3vhe_A 91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE 170 (359)
T ss_dssp EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence 999987654 58999999999999999965432
Q ss_pred ----------------CCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccccccCCC
Q 039595 848 ----------------AKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVEPYS 911 (1078)
Q Consensus 848 ----------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~~~~ 911 (1078)
...+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 247 (359)
T 3vhe_A 171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 247 (359)
T ss_dssp -------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT
T ss_pred cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccc
Confidence 12289999999999999999999999 99999999999999999999999999998764432
Q ss_pred C--CceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccchhhhhhhhhhhcCCCCCCCCCc
Q 039595 912 S--NRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSPG 988 (1078)
Q Consensus 912 ~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1078)
. ......||+.|+|||++.+..++.++|||||||++|||++ |+.||....... ..... ......+... ..
T Consensus 248 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~~~~---~~~~~~~~~~---~~ 320 (359)
T 3vhe_A 248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRR---LKEGTRMRAP---DY 320 (359)
T ss_dssp TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-HHHHH---HHHTCCCCCC---TT
T ss_pred cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH-HHHHH---HHcCCCCCCC---CC
Confidence 2 2345678999999999999999999999999999999998 999975433221 11111 1111111111 11
Q ss_pred cHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhh
Q 039595 989 VMDKLISIMEVAILCLDESPEARPTMEKGFGHHIG 1023 (1078)
Q Consensus 989 ~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~ 1023 (1078)
.. ..+.+++.+||+.||++|||++|+++|.-.
T Consensus 321 ~~---~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 352 (359)
T 3vhe_A 321 TT---PEMYQTMLDCWHGEPSQRPTFSELVEHLGN 352 (359)
T ss_dssp CC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CC---HHHHHHHHHHccCChhhCCCHHHHHHHHHH
Confidence 11 257788999999999999999999998653
No 145
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.2e-38 Score=353.58 Aligned_cols=255 Identities=21% Similarity=0.293 Sum_probs=203.1
Q ss_pred cCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeec----CCe
Q 039595 751 DDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSN----ARH 825 (1078)
Q Consensus 751 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~ 825 (1078)
+.|++.+.||+|+||+||+|.. .++..||+|++..... .....+.+.+|+.++++++||||+++++++.. ...
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 103 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL--TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKC 103 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhh--CHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCce
Confidence 3578888999999999999965 4688999999876432 34456788999999999999999999998864 466
Q ss_pred eEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCC--cEecCCCCCCeeeC-CCCcEEEeccc
Q 039595 826 SFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPS--IIHRDISSKNVLLD-LEFEAHVSDFG 902 (1078)
Q Consensus 826 ~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlk~~NIll~-~~~~~kl~DfG 902 (1078)
.++||||+++|+|.+++.. ...+++..++.++.|++.||+|||+. + |+||||||+||+++ .++.+||+|||
T Consensus 104 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg 177 (290)
T 1t4h_A 104 IVLVTELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLG 177 (290)
T ss_dssp EEEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTT
T ss_pred EEEEEEecCCCCHHHHHHH---ccCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCC
Confidence 8999999999999999943 35689999999999999999999998 8 99999999999997 78999999999
Q ss_pred ccccccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCC
Q 039595 903 IAKFVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRL 982 (1078)
Q Consensus 903 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 982 (1078)
++..... .......||+.|+|||.+.+ .++.++||||+||++|+|++|+.||....... ... . .......
T Consensus 178 ~~~~~~~--~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~---~---~~~~~~~ 247 (290)
T 1t4h_A 178 LATLKRA--SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAA-QIY---R---RVTSGVK 247 (290)
T ss_dssp GGGGCCT--TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH-HHH---H---HHTTTCC
T ss_pred Ccccccc--cccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHH-HHH---H---HHhccCC
Confidence 9975443 23455679999999998764 58999999999999999999999975432211 111 1 1111111
Q ss_pred CCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 983 STPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 983 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
....+ ......+.+++.+||+.||++|||++|+++|+|+..
T Consensus 248 ~~~~~--~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~ 288 (290)
T 1t4h_A 248 PASFD--KVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288 (290)
T ss_dssp CGGGG--GCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred ccccC--CCCCHHHHHHHHHHccCChhhCCCHHHHhhCccccc
Confidence 10000 011125788999999999999999999999999754
No 146
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.8e-38 Score=353.00 Aligned_cols=261 Identities=21% Similarity=0.308 Sum_probs=205.3
Q ss_pred cCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEEE
Q 039595 751 DDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFLV 829 (1078)
Q Consensus 751 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 829 (1078)
++|.....||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 97 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD----SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIF 97 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC----C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc----hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEE
Confidence 3455566899999999999965 578899999987542 33456789999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCC-CCcEEEeccccccccc
Q 039595 830 CEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDL-EFEAHVSDFGIAKFVE 908 (1078)
Q Consensus 830 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~-~~~~kl~DfG~a~~~~ 908 (1078)
|||+++++|.+++........+++..+..++.|++.||+|||++ +|+||||||+||+++. ++.+||+|||.+....
T Consensus 98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~ 174 (295)
T 2clq_A 98 MEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA 174 (295)
T ss_dssp EECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESC
T ss_pred EEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccC
Confidence 99999999999996554445678899999999999999999999 9999999999999987 8999999999998765
Q ss_pred CCCCCceeeccccccccccccccCC--CCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCC
Q 039595 909 PYSSNRTEFVGTFGYAAPEIAYTMR--ATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPS 986 (1078)
Q Consensus 909 ~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 986 (1078)
..........|++.|+|||++.+.. ++.++||||||+++|||++|+.||.......... .........+.....
T Consensus 175 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~- 250 (295)
T 2clq_A 175 GINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAM---FKVGMFKVHPEIPES- 250 (295)
T ss_dssp C-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHH---HHHHHHCCCCCCCTT-
T ss_pred CCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHH---Hhhcccccccccccc-
Confidence 4433445567999999999987654 8899999999999999999999975332211100 011111112222211
Q ss_pred CccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhhhH
Q 039595 987 PGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYCDE 1027 (1078)
Q Consensus 987 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~~~ 1027 (1078)
.. ..+.+++.+||+.||++|||++|+++|+|+....
T Consensus 251 --~~---~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~ 286 (295)
T 2clq_A 251 --MS---AEAKAFILKCFEPDPDKRACANDLLVDEFLKVSS 286 (295)
T ss_dssp --SC---HHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC--
T ss_pred --CC---HHHHHHHHHHccCChhhCCCHHHHhcChhhhhcc
Confidence 11 2577889999999999999999999999987543
No 147
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.1e-39 Score=372.67 Aligned_cols=266 Identities=24% Similarity=0.341 Sum_probs=195.4
Q ss_pred HhhcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCC-CCceeeEEeeeecC--
Q 039595 748 KATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIR-HRNIVKFHGFCSNA-- 823 (1078)
Q Consensus 748 ~~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~-- 823 (1078)
...++|++.+.||+|+||.||+|.. .+|+.||||++.... ......+.+.+|+.+++++. ||||+++++++...
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~--~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~ 83 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAF--QNSTDAQRTFREIMILTELSGHENIVNLLNVLRADND 83 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC----CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTS
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccc--cChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCC
Confidence 3457899999999999999999965 579999999986542 23455677889999999997 99999999999644
Q ss_pred CeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccc
Q 039595 824 RHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGI 903 (1078)
Q Consensus 824 ~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~ 903 (1078)
...|+||||++ |+|.++++. ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 84 ~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~ 155 (388)
T 3oz6_A 84 RDVYLVFDYME-TDLHAVIRA----NILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGL 155 (388)
T ss_dssp SCEEEEEECCS-EEHHHHHHH----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred CEEEEEecccC-cCHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcc
Confidence 47899999998 489998843 4688999999999999999999999 999999999999999999999999999
Q ss_pred cccccCC---------------------CCCceeecccccccccccccc-CCCCccchhHHHHHHHHHHHhCCCCCCccc
Q 039595 904 AKFVEPY---------------------SSNRTEFVGTFGYAAPEIAYT-MRATEKYDVYSFGVLVFEVIKGNHPRDFFS 961 (1078)
Q Consensus 904 a~~~~~~---------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltG~~p~~~~~ 961 (1078)
|+.+... .......+||+.|+|||++.+ ..++.++||||+||++|||++|++||...+
T Consensus 156 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~ 235 (388)
T 3oz6_A 156 SRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS 235 (388)
T ss_dssp CEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 9865321 112244689999999999886 678999999999999999999999975332
Q ss_pred ccccchhhhhhhh------------------------hhhc---CCCCCCCCCccH----------HHHHHHHHHHHhcc
Q 039595 962 INFSSFSNMIIEV------------------------NQIL---DPRLSTPSPGVM----------DKLISIMEVAILCL 1004 (1078)
Q Consensus 962 ~~~~~~~~~~~~~------------------------~~~~---~~~~~~~~~~~~----------~~~~~l~~li~~cl 1004 (1078)
.. .....+... .... ........+... ....++.+++.+||
T Consensus 236 ~~--~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L 313 (388)
T 3oz6_A 236 TM--NQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLL 313 (388)
T ss_dssp HH--HHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHC
T ss_pred HH--HHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhh
Confidence 11 111110000 0000 000000000000 01225789999999
Q ss_pred cCCCCCCCChhHHHHHhhhhh
Q 039595 1005 DESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 1005 ~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
..||++|||++|+++|||+..
T Consensus 314 ~~dP~~R~t~~e~l~Hp~~~~ 334 (388)
T 3oz6_A 314 QFNPNKRISANDALKHPFVSI 334 (388)
T ss_dssp CSSGGGSCCHHHHTTSTTTTT
T ss_pred ccCcccCCCHHHHhCCHHHHH
Confidence 999999999999999999753
No 148
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.4e-39 Score=364.46 Aligned_cols=271 Identities=21% Similarity=0.210 Sum_probs=202.7
Q ss_pred HhhcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCC-hhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCe
Q 039595 748 KATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGN-MADQDEFLNVVLALNEIRHRNIVKFHGFCSNARH 825 (1078)
Q Consensus 748 ~~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 825 (1078)
...++|++.+.||+|+||.||+|... +|+.||||++........ ....+.+.+|+.++++++||||+++++++.+.+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 44578999999999999999999765 689999999875432211 1112467889999999999999999999999999
Q ss_pred eEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccc
Q 039595 826 SFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAK 905 (1078)
Q Consensus 826 ~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~ 905 (1078)
.++||||+++ +|.+++... ...+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDN--SLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAK 160 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTC--CSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred eEEEEEcCCC-CHHHHHHhc--CcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccce
Confidence 9999999987 898888442 34688899999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCCCceeeccccccccccccccC-CCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCC
Q 039595 906 FVEPYSSNRTEFVGTFGYAAPEIAYTM-RATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLST 984 (1078)
Q Consensus 906 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 984 (1078)
.............||+.|+|||++.+. .++.++||||+||++|||++|.+||...... .................+..
T Consensus 161 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~ 239 (346)
T 1ua2_A 161 SFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL-DQLTRIFETLGTPTEEQWPD 239 (346)
T ss_dssp TTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCTTTSSS
T ss_pred eccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHcCCCChhhhhh
Confidence 776555455567899999999998764 5899999999999999999999997543221 11111111000000000000
Q ss_pred -----------CCC-cc-----HHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 985 -----------PSP-GV-----MDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 985 -----------~~~-~~-----~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
..+ .. .....++.+++.+||+.||++|||++|+++|+|+..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~ 297 (346)
T 1ua2_A 240 MCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSN 297 (346)
T ss_dssp TTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTS
T ss_pred hccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhc
Confidence 000 00 111246889999999999999999999999999864
No 149
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=5.4e-39 Score=355.07 Aligned_cols=254 Identities=26% Similarity=0.388 Sum_probs=208.2
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
.++|++.+.||+|+||.||+|... +++.||+|++...... .....+.+.+|+.++++++||||+++++++.+++..++
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 91 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLE-KEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYL 91 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccc-hHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEE
Confidence 368999999999999999999665 6789999998654321 12234678899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVE 908 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~ 908 (1078)
||||+++|+|.+++.. ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+....
T Consensus 92 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 165 (284)
T 2vgo_A 92 MLEFAPRGELYKELQK---HGRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAP 165 (284)
T ss_dssp EECCCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECS
T ss_pred EEEeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCc
Confidence 9999999999999943 34689999999999999999999999 99999999999999999999999999997654
Q ss_pred CCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCCCc
Q 039595 909 PYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSPG 988 (1078)
Q Consensus 909 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1078)
.. ......|++.|+|||.+.+..++.++||||+|+++|||++|+.||+..... .... .+.......+ ..
T Consensus 166 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~------~~~~~~~~~~-~~ 234 (284)
T 2vgo_A 166 SL--RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT--ETHR------RIVNVDLKFP-PF 234 (284)
T ss_dssp SS--CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHH------HHHTTCCCCC-TT
T ss_pred cc--ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh--HHHH------HHhccccCCC-Cc
Confidence 32 234567899999999999999999999999999999999999997643221 1111 1111111111 11
Q ss_pred cHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhh
Q 039595 989 VMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGY 1024 (1078)
Q Consensus 989 ~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~ 1024 (1078)
. ...+.+++.+||+.||++|||++|+++|+|+.
T Consensus 235 ~---~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~ 267 (284)
T 2vgo_A 235 L---SDGSKDLISKLLRYHPPQRLPLKGVMEHPWVK 267 (284)
T ss_dssp S---CHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHH
T ss_pred C---CHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHH
Confidence 1 12577899999999999999999999999975
No 150
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=3.6e-39 Score=366.36 Aligned_cols=254 Identities=28% Similarity=0.393 Sum_probs=204.5
Q ss_pred cCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEEE
Q 039595 751 DDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFLV 829 (1078)
Q Consensus 751 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 829 (1078)
+.|+..+.||+|+||+||+|.. .+|+.||||++...... .....+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ-SNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEcccccc-chHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 4588899999999999999965 57899999998754321 233456788999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccccccC
Q 039595 830 CEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVEP 909 (1078)
Q Consensus 830 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~~ 909 (1078)
|||+. |++.+++.. ....+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 133 ~e~~~-g~l~~~l~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 206 (348)
T 1u5q_A 133 MEYCL-GSASDLLEV--HKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206 (348)
T ss_dssp EECCS-EEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred EecCC-CCHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence 99997 588887743 235689999999999999999999999 999999999999999999999999999986543
Q ss_pred CCCCceeeccccccccccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCC
Q 039595 910 YSSNRTEFVGTFGYAAPEIAY---TMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPS 986 (1078)
Q Consensus 910 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 986 (1078)
.....||+.|+|||++. +..++.++|||||||++|||++|+.||...... .. .........+... .
T Consensus 207 ----~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~--~~---~~~~~~~~~~~~~--~ 275 (348)
T 1u5q_A 207 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--SA---LYHIAQNESPALQ--S 275 (348)
T ss_dssp ----BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HH---HHHHHHSCCCCCC--C
T ss_pred ----CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--HH---HHHHHhcCCCCCC--C
Confidence 23457999999999984 567899999999999999999999997533211 11 1111111111111 1
Q ss_pred CccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 987 PGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 987 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
.... ..+.+++.+||+.||++|||++|+++|+|...
T Consensus 276 ~~~~---~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~ 311 (348)
T 1u5q_A 276 GHWS---EYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR 311 (348)
T ss_dssp TTSC---HHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHS
T ss_pred CCCC---HHHHHHHHHHcccChhhCcCHHHHhhChhhhc
Confidence 1122 25678899999999999999999999999864
No 151
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-39 Score=368.53 Aligned_cols=263 Identities=21% Similarity=0.267 Sum_probs=207.3
Q ss_pred hcCCCccceeccCCceeEEEEEe----CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcC-CCCceeeEEeeeecCC
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAEL----PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEI-RHRNIVKFHGFCSNAR 824 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 824 (1078)
.++|++.+.||+|+||+||+|+. .+++.||||+++...........+.+.+|+.+++++ +||||+++++++....
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 46899999999999999999976 378999999997644322223345567789999999 6999999999999999
Q ss_pred eeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccc
Q 039595 825 HSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIA 904 (1078)
Q Consensus 825 ~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a 904 (1078)
..++||||+++|+|.+++.. ...+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a 206 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQ---RERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLS 206 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred eEEEEeecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCC
Confidence 99999999999999999943 34689999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCC-CCceeecccccccccccccc--CCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCC
Q 039595 905 KFVEPYS-SNRTEFVGTFGYAAPEIAYT--MRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPR 981 (1078)
Q Consensus 905 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 981 (1078)
+...... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ . ..+........+.
T Consensus 207 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~-~-~~~~~~~~~~~~~ 284 (355)
T 1vzo_A 207 KEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS-Q-AEISRRILKSEPP 284 (355)
T ss_dssp EECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC-H-HHHHHHHHHCCCC
T ss_pred eecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch-H-HHHHHHHhccCCC
Confidence 8654322 22345679999999999986 3478999999999999999999999764332111 1 1111111111122
Q ss_pred CCCCCCccHHHHHHHHHHHHhcccCCCCCCC-----ChhHHHHHhhhhhh
Q 039595 982 LSTPSPGVMDKLISIMEVAILCLDESPEARP-----TMEKGFGHHIGYCD 1026 (1078)
Q Consensus 982 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~ell~h~~~~~~ 1026 (1078)
... .. ...+.+++.+||..||++|| +++|+++|+|+...
T Consensus 285 ~~~---~~---~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~ 328 (355)
T 1vzo_A 285 YPQ---EM---SALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI 328 (355)
T ss_dssp CCT---TS---CHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred CCc---cc---CHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcC
Confidence 221 11 12567889999999999999 99999999998753
No 152
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2.1e-37 Score=367.46 Aligned_cols=346 Identities=28% Similarity=0.415 Sum_probs=175.4
Q ss_pred cccccceeecccccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEE
Q 039595 172 QLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTL 251 (1078)
Q Consensus 172 ~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 251 (1078)
.+++++.|++.++.+.. +| .+..+++|++|+|++|.+++..| ++++++|++|++++|++++..| +.++++|++|
T Consensus 44 ~l~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L 117 (466)
T 1o6v_A 44 DLDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGL 117 (466)
T ss_dssp HHHTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEE
T ss_pred HhccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEE
Confidence 45667777777776653 44 36667777777777777665433 6667777777777777766543 6667777777
Q ss_pred eccccccCCCCCcccCCCcccceeecccccccCccccccccccCCceeeecccCCCCCCCccccCCCccCeeeccccccC
Q 039595 252 FLYKNSLSGSIPSIIGNLKSLHQLDLIENQLSGSIPLSFGNLSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLN 331 (1078)
Q Consensus 252 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~ 331 (1078)
+|++|++++..+ +.++++|++|++++|.+++. + .++.+++|+.|+++ |.+.+..+ +.++++|++|++++|+++
T Consensus 118 ~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~~~--~~~l~~L~~L~l~~n~l~ 190 (466)
T 1o6v_A 118 TLFNNQITDIDP--LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQVTDLKP--LANLTTLERLDISSNKVS 190 (466)
T ss_dssp ECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred ECCCCCCCCChH--HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-CcccCchh--hccCCCCCEEECcCCcCC
Confidence 777777664422 66667777777777766642 2 25555555555553 33332211 444444444444444444
Q ss_pred ccCCCCCCCCCcCcEEEccCccCCCCCCccccccCCCCeEEcccccCccccCCCCccCCCCceeecccCcCCCCCCcccc
Q 039595 332 GVIPPSIGNLSSLRNLSLFNNGLYGSIPEEIGYLKSLSELKLCKNNLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLK 411 (1078)
Q Consensus 332 ~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~ 411 (1078)
+. ..+..+++|++|++++|.+++..| ++.+++|+.|++++|++.+. ..+.
T Consensus 191 ~~--------------------------~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~ 240 (466)
T 1o6v_A 191 DI--------------------------SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLA 240 (466)
T ss_dssp CC--------------------------GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGG
T ss_pred CC--------------------------hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhh
Confidence 32 123444444444444444443322 33344444444444444321 2233
Q ss_pred ccCCCCeEEccCccccccchhhccCCCCCcEecCCCCccCCccCccccCCCCCceecccccccCCCCCccccCCCcccEE
Q 039595 412 SLTSLKRVRFNQNNLVGKVYEAFGDHPNLTFLDLSQNNFDGKISFNWRNLPKLDTFIVSMNNIFGSIPLEIGDSSKLQFL 491 (1078)
Q Consensus 412 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L 491 (1078)
.+++|++|++++|.+.+..+ +..+++|+.|++++|.+++..+ +..+++|+.|
T Consensus 241 ~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--------------------------~~~l~~L~~L 292 (466)
T 1o6v_A 241 SLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--------------------------LAGLTALTNL 292 (466)
T ss_dssp GCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--------------------------GTTCTTCSEE
T ss_pred cCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--------------------------ccCCCccCeE
Confidence 34444444444444433322 3444444444444444443221 3334444444
Q ss_pred eccCCccCCCcccccccCccCcEEeccCCccCCCcccccccccccceeeccCccccCCCCcccccccccccccccCcccc
Q 039595 492 DLSSNHIVGKIPVQLEKLFSLNKLILSLNQLSGSVPLEFGSLTELQYLDLSANKLSSSIPKSIGNLLKLYYLNLSNNQFS 571 (1078)
Q Consensus 492 ~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 571 (1078)
++++|++++..+ +..+++|+.|+|++|++++..| +..+++|++|++++|++++. ..+.++++|++|++++|+++
T Consensus 293 ~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~ 366 (466)
T 1o6v_A 293 ELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQIS 366 (466)
T ss_dssp ECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCC
T ss_pred EcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccC
Confidence 444444443322 4444455555555555544333 44445555555555555432 23444555555555555554
Q ss_pred cccchhhhcccccCeeecCCCccCC
Q 039595 572 HTIPIEFEKLIHLSKLDLSHNILQE 596 (1078)
Q Consensus 572 ~~~~~~~~~l~~L~~L~Ls~N~l~~ 596 (1078)
+..| +..+++|+.|++++|++++
T Consensus 367 ~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 367 DLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp BCGG--GTTCTTCCEEECCCEEEEC
T ss_pred ccch--hhcCCCCCEEeccCCcccC
Confidence 4443 4455555555555555543
No 153
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=7e-39 Score=382.47 Aligned_cols=258 Identities=23% Similarity=0.318 Sum_probs=203.7
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
.++|++.+.||+|+||+||+|..+ +++.||+|++...... ......+.+|+.+++.++||||+++++++.+....|+
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 113 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVS--TSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYL 113 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-------CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccC--chHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 457999999999999999999765 7899999999765432 2235678899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCC---CcEEEecccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLE---FEAHVSDFGIAK 905 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~---~~~kl~DfG~a~ 905 (1078)
||||+++|+|.+++.. ...+++.+++.++.||+.||+|||++ +|+||||||+||+++.. +.+||+|||+++
T Consensus 114 v~e~~~~g~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~ 187 (494)
T 3lij_A 114 VMECYKGGELFDEIIH---RMKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSA 187 (494)
T ss_dssp EEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCe
Confidence 9999999999998843 35689999999999999999999999 99999999999999764 559999999998
Q ss_pred cccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCC
Q 039595 906 FVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTP 985 (1078)
Q Consensus 906 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 985 (1078)
..... .......||+.|+|||++. ..++.++||||+||++|+|++|+.||..... ......+.. ......
T Consensus 188 ~~~~~-~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~i~~------~~~~~~ 257 (494)
T 3lij_A 188 VFENQ-KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD--QEILRKVEK------GKYTFD 257 (494)
T ss_dssp ECBTT-BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHH------TCCCCC
T ss_pred ECCCC-ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHh------CCCCCC
Confidence 76543 2344567999999999886 4689999999999999999999999753322 111111111 111111
Q ss_pred CCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 986 SPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 986 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
.+........+.+++.+||+.||.+|||++|+++|||+..
T Consensus 258 ~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~ 297 (494)
T 3lij_A 258 SPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKE 297 (494)
T ss_dssp SGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHH
T ss_pred chhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCccccc
Confidence 1111122236788999999999999999999999999764
No 154
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=8.2e-39 Score=352.07 Aligned_cols=256 Identities=23% Similarity=0.311 Sum_probs=200.1
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
.++|++.+.||+|+||.||+|..+ +|+.||||++...... .....+.+.+|+.+++.++||||+++++++.+++..++
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIR-SLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFM 88 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEecccccc-chhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEE
Confidence 468999999999999999999765 7999999998654321 12335678899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVE 908 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~ 908 (1078)
||||+++++|.+++.. ...+++.++..++.|++.||+|||++ +++||||||+||+++.++.+||+|||.+....
T Consensus 89 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~ 162 (276)
T 2h6d_A 89 VMEYVSGGELFDYICK---HGRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 162 (276)
T ss_dssp EEECCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCC
T ss_pred EEeccCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccC
Confidence 9999999999999943 34589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCceeeccccccccccccccCCC-CccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCCC
Q 039595 909 PYSSNRTEFVGTFGYAAPEIAYTMRA-TEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSP 987 (1078)
Q Consensus 909 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 987 (1078)
.. .......|++.|+|||.+.+..+ +.++||||+|+++|+|++|+.||+.... ......+.. .. ...+ .
T Consensus 163 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~~~~~---~~-~~~~---~ 232 (276)
T 2h6d_A 163 DG-EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV--PTLFKKIRG---GV-FYIP---E 232 (276)
T ss_dssp C--------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHH---CC-CCCC---T
T ss_pred CC-cceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH--HHHHHHhhc---Cc-ccCc---h
Confidence 42 22345578999999999988765 6899999999999999999999753321 111111111 00 1111 1
Q ss_pred ccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 988 GVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 988 ~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
.. ...+.+++.+||+.||++|||++|+++|+|+..
T Consensus 233 ~~---~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~ 267 (276)
T 2h6d_A 233 YL---NRSVATLLMHMLQVDPLKRATIKDIREHEWFKQ 267 (276)
T ss_dssp TS---CHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHT
T ss_pred hc---CHHHHHHHHHHccCChhhCCCHHHHHhChhhcc
Confidence 11 125778999999999999999999999999753
No 155
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=7.2e-39 Score=357.81 Aligned_cols=256 Identities=25% Similarity=0.324 Sum_probs=205.7
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
.++|++.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|+.++++++||||+++++++.+....++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP----AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYL 83 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC----------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc----ccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEE
Confidence 467999999999999999999764 79999999997542 2234568899999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeee---CCCCcEEEecccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLL---DLEFEAHVSDFGIAK 905 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~kl~DfG~a~ 905 (1078)
||||+++|+|.+++.. .+.+++.++..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||.+.
T Consensus 84 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~ 157 (304)
T 2jam_A 84 VMQLVSGGELFDRILE---RGVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSK 157 (304)
T ss_dssp EECCCCSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTC
T ss_pred EEEcCCCccHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcce
Confidence 9999999999999843 34689999999999999999999999 99999999999999 788999999999997
Q ss_pred cccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCC
Q 039595 906 FVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTP 985 (1078)
Q Consensus 906 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 985 (1078)
.... .......||+.|+|||.+.+..++.++||||+|+++|||++|+.||..... ......+.. .....+
T Consensus 158 ~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~i~~------~~~~~~ 227 (304)
T 2jam_A 158 MEQN--GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE--SKLFEKIKE------GYYEFE 227 (304)
T ss_dssp CCCC--BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHH------CCCCCC
T ss_pred ecCC--CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHc------CCCCCC
Confidence 5432 223445789999999999999999999999999999999999999753321 111111111 111111
Q ss_pred CCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 986 SPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 986 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
.+........+.+++.+||+.||++|||++|+++|+|+..
T Consensus 228 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~ 267 (304)
T 2jam_A 228 SPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDG 267 (304)
T ss_dssp TTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHS
T ss_pred ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccC
Confidence 1101111236788999999999999999999999999764
No 156
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=7.4e-39 Score=383.24 Aligned_cols=260 Identities=22% Similarity=0.300 Sum_probs=205.9
Q ss_pred hhcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCC---------hhhHHHHHHHHHHHhcCCCCceeeEEe
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGN---------MADQDEFLNVVLALNEIRHRNIVKFHG 818 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~---------~~~~~~~~~e~~~l~~l~h~niv~l~~ 818 (1078)
..++|++.+.||+|+||+||+|..+ +++.||||++........ ....+.+.+|+.++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 4578999999999999999999664 688999999976532211 133567899999999999999999999
Q ss_pred eeecCCeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCC---c
Q 039595 819 FCSNARHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEF---E 895 (1078)
Q Consensus 819 ~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~---~ 895 (1078)
++.++...|+||||+++|+|.+++.. ...+++..++.++.||+.||+|||++ +|+||||||+||+++.++ .
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~ 187 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIIN---RHKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLN 187 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSS
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCcc
Confidence 99999999999999999999998843 35689999999999999999999999 999999999999998876 6
Q ss_pred EEEecccccccccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhh
Q 039595 896 AHVSDFGIAKFVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVN 975 (1078)
Q Consensus 896 ~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~ 975 (1078)
+||+|||+++..... .......||+.|+|||++.+ .++.++||||+||++|+|++|+.||..... ......+..
T Consensus 188 ~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~i~~-- 261 (504)
T 3q5i_A 188 IKIVDFGLSSFFSKD-YKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQND--QDIIKKVEK-- 261 (504)
T ss_dssp EEECCCTTCEECCTT-SCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHH--
T ss_pred EEEEECCCCEEcCCC-CccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHc--
Confidence 999999999876543 23445679999999999874 689999999999999999999999754322 111111111
Q ss_pred hhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhh
Q 039595 976 QILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGY 1024 (1078)
Q Consensus 976 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~ 1024 (1078)
.......+........+.+++.+||..||.+|||++|+++|||+.
T Consensus 262 ----~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~ 306 (504)
T 3q5i_A 262 ----GKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIK 306 (504)
T ss_dssp ----CCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred ----CCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhh
Confidence 111111111111123678899999999999999999999999975
No 157
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=2.2e-39 Score=367.14 Aligned_cols=264 Identities=23% Similarity=0.348 Sum_probs=208.4
Q ss_pred HHHhhcCCCccceeccCCceeEEEEEeC-CC-----CEEEEEEeccccccCChhhHHHHHHHHHHHhcC-CCCceeeEEe
Q 039595 746 IIKATDDFDEKFCIGKGGQGSVYKAELP-SG-----DIVAVKKFNSQLLSGNMADQDEFLNVVLALNEI-RHRNIVKFHG 818 (1078)
Q Consensus 746 ~~~~~~~~~~~~~lG~G~~g~V~~~~~~-~~-----~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~ 818 (1078)
.....++|++.+.||+|+||.||+|... ++ ..||+|++.... .....+.+.+|+.+++++ +||||+++++
T Consensus 41 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~iv~~~~ 117 (333)
T 2i1m_A 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA---HADEKEALMSELKIMSHLGQHENIVNLLG 117 (333)
T ss_dssp GBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred ccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc---ChHHHHHHHHHHHHHHhhcCCCCeeeEEE
Confidence 3445678999999999999999999754 23 479999987542 334567789999999999 8999999999
Q ss_pred eeecCCeeEEEEeecCCCCHHHHhcCCC-----------CCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCC
Q 039595 819 FCSNARHSFLVCEYLHRGSLARILGNDA-----------TAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKN 887 (1078)
Q Consensus 819 ~~~~~~~~~lv~E~~~~g~L~~~l~~~~-----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~N 887 (1078)
++.+++..++||||+++|+|.+++.... ....+++..++.++.||+.||+|||++ +|+||||||+|
T Consensus 118 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~N 194 (333)
T 2i1m_A 118 ACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARN 194 (333)
T ss_dssp EECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred EEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccce
Confidence 9999999999999999999999985421 134579999999999999999999999 99999999999
Q ss_pred eeeCCCCcEEEecccccccccCCCCC--ceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccc
Q 039595 888 VLLDLEFEAHVSDFGIAKFVEPYSSN--RTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSINF 964 (1078)
Q Consensus 888 Ill~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~~ 964 (1078)
|+++.++.+||+|||+++........ .....||+.|+|||.+.+..++.++|||||||++|||++ |..||.......
T Consensus 195 Il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~ 274 (333)
T 2i1m_A 195 VLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS 274 (333)
T ss_dssp CEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH
T ss_pred EEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH
Confidence 99999999999999999876443322 234567889999999999999999999999999999998 999975432211
Q ss_pred cchhhhhhhhhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 965 SSFSNMIIEVNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 965 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
...... .....+..... . ...+.+++.+||+.||.+|||++|++++.....
T Consensus 275 -~~~~~~---~~~~~~~~~~~---~---~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 325 (333)
T 2i1m_A 275 -KFYKLV---KDGYQMAQPAF---A---PKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 325 (333)
T ss_dssp -HHHHHH---HHTCCCCCCTT---C---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -HHHHHH---hcCCCCCCCCC---C---CHHHHHHHHHHhccChhhCcCHHHHHHHHHHHH
Confidence 111111 11111111111 1 125778999999999999999999998765443
No 158
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=7e-39 Score=367.06 Aligned_cols=265 Identities=23% Similarity=0.307 Sum_probs=208.5
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
.++|++.+.||+|+||+||+|... +++.||+|++.... .....+.+.+|+.++++++||||+++++++.+++..++
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 108 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI 108 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC---CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc---CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEE
Confidence 367999999999999999999665 78999999987642 34456778999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVE 908 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~ 908 (1078)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||+++ +|+||||||+||+++.++.+||+|||++....
T Consensus 109 v~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 183 (360)
T 3eqc_A 109 CMEHMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 183 (360)
T ss_dssp EECCCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHH
T ss_pred EEECCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccc
Confidence 9999999999999943 346899999999999999999999832 89999999999999999999999999997653
Q ss_pred CCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhh-------------------
Q 039595 909 PYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSN------------------- 969 (1078)
Q Consensus 909 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~------------------- 969 (1078)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||............
T Consensus 184 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (360)
T 3eqc_A 184 DS--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPG 261 (360)
T ss_dssp HH--C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------
T ss_pred cc--cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCC
Confidence 22 233457899999999999999999999999999999999999997643321100000
Q ss_pred ---------------hhhhhhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhhh
Q 039595 970 ---------------MIIEVNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYCD 1026 (1078)
Q Consensus 970 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~~ 1026 (1078)
................... .....+.+++.+||+.||++|||++|+++|+|+...
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 331 (360)
T 3eqc_A 262 RPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSG--VFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 331 (360)
T ss_dssp ------------CCCHHHHHHHHHHSCCCCCCTT--TSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHH
T ss_pred CcccccccCCCCcccchhhhhHHhccCCCCCCcc--cccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcc
Confidence 0000000000111000000 112257899999999999999999999999998753
No 159
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2.8e-37 Score=366.38 Aligned_cols=359 Identities=31% Similarity=0.455 Sum_probs=267.3
Q ss_pred cCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeecccccccCCccCcccCCCCCcEEEccCCCCCC
Q 039595 133 LGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLYLNNNSLFG 212 (1078)
Q Consensus 133 Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~ 212 (1078)
+..+.+.+.++ ...+++|+.|++++|.+. .+|. +..+++|++|++++|.+.+..| ++++++|++|++++|.+++
T Consensus 31 ~~~~~~~~~i~--~~~l~~l~~L~l~~~~i~-~l~~-~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~ 104 (466)
T 1o6v_A 31 LGKTNVTDTVS--QTDLDQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIAD 104 (466)
T ss_dssp TTCSSTTSEEC--HHHHHTCCEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC
T ss_pred hcccccccccC--hhHhccccEEecCCCCCc-cCcc-hhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCcccc
Confidence 34445554443 245789999999999998 5774 8899999999999999997654 9999999999999999997
Q ss_pred CCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCCCCcccCCCcccceeecccccccCcccccccc
Q 039595 213 YIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLDLIENQLSGSIPLSFGN 292 (1078)
Q Consensus 213 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 292 (1078)
..| ++++++|++|+|++|++++..+ +.++++|++|++++|++++ ++ .++++++|++|+++ |.+.+..+ +.+
T Consensus 105 ~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~~--~~~ 175 (466)
T 1o6v_A 105 ITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLKP--LAN 175 (466)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCGG--GTT
T ss_pred Chh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCchh--hcc
Confidence 655 9999999999999999998644 9999999999999999996 44 48999999999997 56665443 899
Q ss_pred ccCCceeeecccCCCCCCCccccCCCccCeeeccccccCccCCCCCCCCCcCcEEEccCccCCCCCCccccccCCCCeEE
Q 039595 293 LSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLNGVIPPSIGNLSSLRNLSLFNNGLYGSIPEEIGYLKSLSELK 372 (1078)
Q Consensus 293 l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 372 (1078)
+++|+.|++++|.+++. ..+.++++|++|++++|++++..| ++.+++|+.|++++|.+.+. ..+..+++|++|+
T Consensus 176 l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~ 249 (466)
T 1o6v_A 176 LTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLD 249 (466)
T ss_dssp CTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEE
T ss_pred CCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEE
Confidence 99999999999999864 358899999999999999987655 77788999999999988753 3577888888888
Q ss_pred cccccCccccCCCCccCCCCceeecccCcCCCCCCccccccCCCCeEEccCccccccchhhccCCCCCcEecCCCCccCC
Q 039595 373 LCKNNLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLKSLTSLKRVRFNQNNLVGKVYEAFGDHPNLTFLDLSQNNFDG 452 (1078)
Q Consensus 373 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 452 (1078)
+++|++++..+ +..+++|+.|++++|++.+..+ +..+++|++|++++|.+.++.+ +..+++|+.|++++|+++
T Consensus 250 l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~- 322 (466)
T 1o6v_A 250 LANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNIS- 322 (466)
T ss_dssp CCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCS-
T ss_pred CCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCC-
Confidence 88888876554 6677777777777777765433 4555555555555555544332 334444444444444443
Q ss_pred ccCccccCCCCCceecccccccCCCCCccccCCCcccEEeccCCccCCCcccccccCccCcEEeccCCccCCCccccccc
Q 039595 453 KISFNWRNLPKLDTFIVSMNNIFGSIPLEIGDSSKLQFLDLSSNHIVGKIPVQLEKLFSLNKLILSLNQLSGSVPLEFGS 532 (1078)
Q Consensus 453 ~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 532 (1078)
+..| +..+++|++|++++|++++. ..+..+++|+.|++++|++++..| +..
T Consensus 323 -----------------------~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~ 373 (466)
T 1o6v_A 323 -----------------------DISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LAN 373 (466)
T ss_dssp -----------------------CCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTT
T ss_pred -----------------------Cchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhc
Confidence 3322 44556666666666666643 345666666666666666665554 566
Q ss_pred ccccceeeccCccccC
Q 039595 533 LTELQYLDLSANKLSS 548 (1078)
Q Consensus 533 l~~L~~L~Ls~N~l~~ 548 (1078)
+++|+.|++++|++++
T Consensus 374 l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 374 LTRITQLGLNDQAWTN 389 (466)
T ss_dssp CTTCCEEECCCEEEEC
T ss_pred CCCCCEEeccCCcccC
Confidence 6666666666666664
No 160
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.8e-39 Score=366.89 Aligned_cols=264 Identities=21% Similarity=0.329 Sum_probs=207.2
Q ss_pred HhhcCCCccceeccCCceeEEEEEe------CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcC-CCCceeeEEeee
Q 039595 748 KATDDFDEKFCIGKGGQGSVYKAEL------PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEI-RHRNIVKFHGFC 820 (1078)
Q Consensus 748 ~~~~~~~~~~~lG~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~ 820 (1078)
...++|++.+.||+|+||.||+|.. .++..||||++.... .....+.+.+|+.+++++ +||||+++++++
T Consensus 42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 118 (344)
T 1rjb_A 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA---DSSEREALMSELKMMTQLGSHENIVNLLGAC 118 (344)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC---------CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc---CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 3557899999999999999999975 245689999997542 223456789999999999 899999999999
Q ss_pred ecCCeeEEEEeecCCCCHHHHhcCCCCC--------------------CcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEe
Q 039595 821 SNARHSFLVCEYLHRGSLARILGNDATA--------------------KELSWNRRINVIKGVANALSYLHHDCLPSIIH 880 (1078)
Q Consensus 821 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~--------------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH 880 (1078)
..++..++||||+++|+|.+++...... ..+++.+++.++.||+.||+|||++ +|+|
T Consensus 119 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH 195 (344)
T 1rjb_A 119 TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVH 195 (344)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEE
T ss_pred eeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Cccc
Confidence 9999999999999999999999654321 3479999999999999999999999 9999
Q ss_pred cCCCCCCeeeCCCCcEEEecccccccccCCCCC--ceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCC
Q 039595 881 RDISSKNVLLDLEFEAHVSDFGIAKFVEPYSSN--RTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPR 957 (1078)
Q Consensus 881 ~Dlk~~NIll~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~ 957 (1078)
|||||+||+++.++.+||+|||++......... .....||+.|+|||.+.+..++.++|||||||++|||+| |+.||
T Consensus 196 ~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 275 (344)
T 1rjb_A 196 RDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPY 275 (344)
T ss_dssp TTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred CCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCc
Confidence 999999999999999999999999876543322 234567889999999999999999999999999999998 99997
Q ss_pred CcccccccchhhhhhhhhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhhhH
Q 039595 958 DFFSINFSSFSNMIIEVNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYCDE 1027 (1078)
Q Consensus 958 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~~~ 1027 (1078)
....... ..... ......+... ... ...+.+++.+||+.||++|||++|++++......+
T Consensus 276 ~~~~~~~-~~~~~---~~~~~~~~~~---~~~---~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 335 (344)
T 1rjb_A 276 PGIPVDA-NFYKL---IQNGFKMDQP---FYA---TEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD 335 (344)
T ss_dssp TTCCCSH-HHHHH---HHTTCCCCCC---TTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred ccCCcHH-HHHHH---HhcCCCCCCC---CCC---CHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 6433211 11111 1111111111 111 23578899999999999999999999998755443
No 161
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=5.5e-39 Score=354.02 Aligned_cols=261 Identities=25% Similarity=0.367 Sum_probs=208.1
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeee--cCCee
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCS--NARHS 826 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~~ 826 (1078)
.++|++.+.||+|+||.||+|..+ +++.||+|++..... .....+.+.+|+.++++++||||+++++++. .+...
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 82 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM--TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTL 82 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccC--CHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceE
Confidence 468999999999999999999664 789999999976432 3445677899999999999999999999874 46789
Q ss_pred EEEEeecCCCCHHHHhcCCC-CCCcCCHHHHHHHHHHHHHHHHHHHhcCCCC-----cEecCCCCCCeeeCCCCcEEEec
Q 039595 827 FLVCEYLHRGSLARILGNDA-TAKELSWNRRINVIKGVANALSYLHHDCLPS-----IIHRDISSKNVLLDLEFEAHVSD 900 (1078)
Q Consensus 827 ~lv~E~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-----ivH~Dlk~~NIll~~~~~~kl~D 900 (1078)
++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+||+|
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~d 159 (279)
T 2w5a_A 83 YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGD 159 (279)
T ss_dssp EEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECC
T ss_pred EEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEec
Confidence 99999999999999995422 234589999999999999999999999 8 99999999999999999999999
Q ss_pred ccccccccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCC
Q 039595 901 FGIAKFVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDP 980 (1078)
Q Consensus 901 fG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 980 (1078)
||.++.............|++.|+|||.+.+..++.++||||||+++|||++|+.||..... ......+ .....+
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~i---~~~~~~ 234 (279)
T 2w5a_A 160 FGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ--KELAGKI---REGKFR 234 (279)
T ss_dssp CCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH---HHTCCC
T ss_pred CchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH--HHHHHHH---hhcccc
Confidence 99998765433333456789999999999998999999999999999999999999764322 1111111 111111
Q ss_pred CCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhhh
Q 039595 981 RLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYCD 1026 (1078)
Q Consensus 981 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~~ 1026 (1078)
... ... ...+.+++.+||+.||++|||++|+++|+|....
T Consensus 235 ~~~---~~~---~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~ 274 (279)
T 2w5a_A 235 RIP---YRY---SDELNEIITRMLNLKDYHRPSVEEILENPLILEH 274 (279)
T ss_dssp CCC---TTS---CHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGG
T ss_pred cCC---ccc---CHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhh
Confidence 111 111 2357788999999999999999999999997653
No 162
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1e-38 Score=374.01 Aligned_cols=267 Identities=21% Similarity=0.283 Sum_probs=201.2
Q ss_pred hcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecC-----
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNA----- 823 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----- 823 (1078)
.++|++.+.||+|+||+||+|.. .+++.||||++.... ......+.+.+|+.++++++||||+++++++...
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 102 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMF--EDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKF 102 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTT--TSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchh--cChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcC
Confidence 46899999999999999999965 468899999997542 2445567889999999999999999999999765
Q ss_pred CeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccc
Q 039595 824 RHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGI 903 (1078)
Q Consensus 824 ~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~ 903 (1078)
...|+||||+++ +|.++++. ...+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~~lv~e~~~~-~L~~~~~~---~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGl 175 (432)
T 3n9x_A 103 DELYIVLEIADS-DLKKLFKT---PIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGL 175 (432)
T ss_dssp CCEEEEEECCSE-EHHHHHHS---SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred CeEEEEEecCCc-CHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCC
Confidence 578999999874 99999953 35689999999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCC----------------------Cceeecccccccccccc-ccCCCCccchhHHHHHHHHHHHhCCCCCCcc
Q 039595 904 AKFVEPYSS----------------------NRTEFVGTFGYAAPEIA-YTMRATEKYDVYSFGVLVFEVIKGNHPRDFF 960 (1078)
Q Consensus 904 a~~~~~~~~----------------------~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwSlG~il~elltG~~p~~~~ 960 (1078)
|+....... .....+||+.|+|||++ .+..++.++||||+||++|||++|..||...
T Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~ 255 (432)
T 3n9x_A 176 ARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHIND 255 (432)
T ss_dssp CEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSS
T ss_pred cccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccc
Confidence 987644221 13567899999999986 5667999999999999999999876654321
Q ss_pred ccc----ccc-------------------hhhhhhhhh-----------------------hhcCCCCCCCC-CccHHHH
Q 039595 961 SIN----FSS-------------------FSNMIIEVN-----------------------QILDPRLSTPS-PGVMDKL 993 (1078)
Q Consensus 961 ~~~----~~~-------------------~~~~~~~~~-----------------------~~~~~~~~~~~-~~~~~~~ 993 (1078)
... +.. ......... ........... .......
T Consensus 256 ~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 335 (432)
T 3n9x_A 256 PTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSIS 335 (432)
T ss_dssp GGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSC
T ss_pred cccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCC
Confidence 100 000 000000000 00000000000 0000112
Q ss_pred HHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 994 ISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 994 ~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
.++.+++.+||..||++|||++|+++|||+..
T Consensus 336 ~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~ 367 (432)
T 3n9x_A 336 DDGINLLESMLKFNPNKRITIDQALDHPYLKD 367 (432)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTT
T ss_pred HHHHHHHHHHhcCCcccCCCHHHHhcChhhhh
Confidence 36789999999999999999999999999764
No 163
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=7.7e-39 Score=393.58 Aligned_cols=258 Identities=22% Similarity=0.287 Sum_probs=212.5
Q ss_pred hhcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcC-CCCceeeEEeeeecCCee
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEI-RHRNIVKFHGFCSNARHS 826 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 826 (1078)
..++|++.+.||+|+||+||+|..+ +++.||||++++.... .....+.+..|..++..+ +||+|+++++++.+.+..
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~-~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~ 417 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVI-QDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 417 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHH-HTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccc-cHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEE
Confidence 4578999999999999999999654 6889999999764322 122345677888899887 799999999999999999
Q ss_pred EEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccc
Q 039595 827 FLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKF 906 (1078)
Q Consensus 827 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~ 906 (1078)
|+||||+++|+|.+++.. .+.+++.+++.++.||+.||+|||++ +|+||||||+|||++.+|.+||+|||+|+.
T Consensus 418 ~lV~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~ 491 (674)
T 3pfq_A 418 YFVMEYVNGGDLMYHIQQ---VGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE 491 (674)
T ss_dssp EEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEE
T ss_pred EEEEeCcCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeec
Confidence 999999999999999953 35699999999999999999999999 999999999999999999999999999987
Q ss_pred ccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCC
Q 039595 907 VEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPS 986 (1078)
Q Consensus 907 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 986 (1078)
...........+||+.|+|||++.+..++.++|||||||++|||++|+.||...+. ..... .+.......+
T Consensus 492 ~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~--~~~~~------~i~~~~~~~p- 562 (674)
T 3pfq_A 492 NIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--DELFQ------SIMEHNVAYP- 562 (674)
T ss_dssp CCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHH------HHHSSCCCCC-
T ss_pred cccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH--HHHHH------HHHhCCCCCC-
Confidence 54444455677899999999999999999999999999999999999999754322 11222 1222222111
Q ss_pred CccHHHHHHHHHHHHhcccCCCCCCCCh-----hHHHHHhhhhh
Q 039595 987 PGVMDKLISIMEVAILCLDESPEARPTM-----EKGFGHHIGYC 1025 (1078)
Q Consensus 987 ~~~~~~~~~l~~li~~cl~~dP~~RPt~-----~ell~h~~~~~ 1025 (1078)
... ..++.+++.+||+.||++||++ +|+++|+|+..
T Consensus 563 ~~~---s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~ 603 (674)
T 3pfq_A 563 KSM---SKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY 603 (674)
T ss_dssp TTS---CHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSS
T ss_pred ccC---CHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccC
Confidence 111 2357889999999999999998 99999999865
No 164
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.5e-38 Score=362.99 Aligned_cols=266 Identities=21% Similarity=0.294 Sum_probs=204.9
Q ss_pred hcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeec------
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSN------ 822 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------ 822 (1078)
.++|++.+.||+|+||+||+|.. .+|+.||||++...... ......+.+|+.++++++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 93 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK--EGFPITALREIKILQLLKHENVVNLIEICRTKASPYN 93 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCS--SSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-----
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEeccccc--ccchHHHHHHHHHHHhccCCCcccHhheeeccccccc
Confidence 46899999999999999999976 57999999998665322 2234567889999999999999999999876
Q ss_pred --CCeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEec
Q 039595 823 --ARHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSD 900 (1078)
Q Consensus 823 --~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~D 900 (1078)
.+..++||||+++ ++.+.+... ...+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 94 ~~~~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~D 167 (351)
T 3mi9_A 94 RCKGSIYLVFDFCEH-DLAGLLSNV--LVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLAD 167 (351)
T ss_dssp ---CEEEEEEECCSE-EHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECC
T ss_pred cCCceEEEEEeccCC-CHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEcc
Confidence 4568999999986 777777432 34589999999999999999999999 999999999999999999999999
Q ss_pred ccccccccCCC----CCceeecccccccccccccc-CCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhh
Q 039595 901 FGIAKFVEPYS----SNRTEFVGTFGYAAPEIAYT-MRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVN 975 (1078)
Q Consensus 901 fG~a~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~ 975 (1078)
||+++...... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .....+....
T Consensus 168 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~~~i~~~~ 245 (351)
T 3mi9_A 168 FGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ--HQLALISQLC 245 (351)
T ss_dssp CTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHH
T ss_pred chhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHh
Confidence 99998764322 22345678999999999876 45899999999999999999999997643221 1111111111
Q ss_pred hhcCCCCCC----------------CCCccHHH------HHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 976 QILDPRLST----------------PSPGVMDK------LISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 976 ~~~~~~~~~----------------~~~~~~~~------~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
....+.... ........ ...+.+++.+||+.||++|||++|+++|+|+..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~ 317 (351)
T 3mi9_A 246 GSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS 317 (351)
T ss_dssp CCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGS
T ss_pred CCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCC
Confidence 111111100 00111111 124789999999999999999999999999864
No 165
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=8.6e-39 Score=360.29 Aligned_cols=270 Identities=23% Similarity=0.279 Sum_probs=206.0
Q ss_pred hhcCCCccceeccCCceeEEEEEeC-CCCEEEEEEecccccc----CChhhHHHHHHHHHHHhcCCCCceeeEEeeeecC
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLS----GNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNA 823 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~----~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 823 (1078)
..++|++.+.||+|+||.||+|... +++.||||++...... ........+.+|+.++++++||||+++++++..+
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 3468999999999999999999654 6889999998754321 1122234578999999999999999999999766
Q ss_pred CeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCc---EEEec
Q 039595 824 RHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFE---AHVSD 900 (1078)
Q Consensus 824 ~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~---~kl~D 900 (1078)
. .++||||+++|+|.+++.. ...+++.+++.++.||+.||+|||++ +|+||||||+||+++.++. +||+|
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~D 160 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVG---NKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 160 (322)
T ss_dssp S-EEEEEECCTTEETHHHHST---TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECC
T ss_pred c-eEEEEecCCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEcc
Confidence 5 8999999999999999843 45689999999999999999999999 9999999999999987664 99999
Q ss_pred ccccccccCCCCCceeeccccccccccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhh
Q 039595 901 FGIAKFVEPYSSNRTEFVGTFGYAAPEIAY---TMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQI 977 (1078)
Q Consensus 901 fG~a~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 977 (1078)
||.++..... .......||+.|+|||++. ...++.++|||||||++|||++|+.||....... .....+...
T Consensus 161 fg~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~--- 235 (322)
T 2ycf_A 161 FGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLKDQITSG--- 235 (322)
T ss_dssp CTTCEECCCC-HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS-CHHHHHHHT---
T ss_pred Cccceecccc-cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH-HHHHHHHhC---
Confidence 9999876432 1223457899999999874 4678999999999999999999999976433221 111111110
Q ss_pred cCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhhhHHHHHHH
Q 039595 978 LDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYCDEILAVIL 1033 (1078)
Q Consensus 978 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~~~~~~~~~ 1033 (1078)
...............+.+++.+||+.||++|||++|+++|+|+...+......
T Consensus 236 ---~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~~~~~~~~~ 288 (322)
T 2ycf_A 236 ---KYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQ 288 (322)
T ss_dssp ---CCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCCHHHHHHHH
T ss_pred ---ccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCCHHHHHHHH
Confidence 11000000001123678999999999999999999999999998766554443
No 166
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=6.2e-39 Score=355.77 Aligned_cols=262 Identities=22% Similarity=0.358 Sum_probs=193.4
Q ss_pred hcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
.++|++.+.||+|+||+||+|.. .+|+.||||++..... .....+.+.++...++.++||||+++++++.+++..++
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~l 83 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN--SQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 83 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---C--HHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccC--cHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEE
Confidence 46899999999999999999965 5789999999975421 12233445556666888999999999999999999999
Q ss_pred EEeecCCCCHHHHhcCC-CCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccccc
Q 039595 829 VCEYLHRGSLARILGND-ATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFV 907 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~ 907 (1078)
||||+++ +|.+++... .....+++..++.++.|++.||+|||++. +|+||||||+||+++.++.+||+|||+++..
T Consensus 84 v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 84 CMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp EEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred EEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 9999975 887777431 23456899999999999999999999853 8999999999999999999999999999876
Q ss_pred cCCCCCceeecccccccccccc----ccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCC
Q 039595 908 EPYSSNRTEFVGTFGYAAPEIA----YTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLS 983 (1078)
Q Consensus 908 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 983 (1078)
... .......||+.|+|||.+ .+..++.++||||+||++|||++|+.||+............. ......
T Consensus 161 ~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~------~~~~~~ 233 (290)
T 3fme_A 161 VDD-VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVV------EEPSPQ 233 (290)
T ss_dssp ----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHH------HSCCCC
T ss_pred ccc-ccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHh------ccCCCC
Confidence 542 223345799999999996 566789999999999999999999999764332221111111 111111
Q ss_pred CCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhhh
Q 039595 984 TPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYCD 1026 (1078)
Q Consensus 984 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~~ 1026 (1078)
.+..... .++.+++.+||+.||++|||++|+++|||+...
T Consensus 234 ~~~~~~~---~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~ 273 (290)
T 3fme_A 234 LPADKFS---AEFVDFTSQCLKKNSKERPTYPELMQHPFFTLH 273 (290)
T ss_dssp CCTTTSC---HHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred cccccCC---HHHHHHHHHHhhcChhhCcCHHHHHhCcccccC
Confidence 1111122 357789999999999999999999999998653
No 167
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=5.2e-39 Score=369.85 Aligned_cols=255 Identities=23% Similarity=0.357 Sum_probs=203.8
Q ss_pred hhcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeE
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSF 827 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 827 (1078)
..++|++.+.||+|+||.||+|.++ +++.||||+++... .....+.+.+|+.++++++||||+++++++..++..+
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 188 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL---PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIY 188 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS---CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC---CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcE
Confidence 3468899999999999999999775 78999999986532 2334557889999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccccc
Q 039595 828 LVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFV 907 (1078)
Q Consensus 828 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~ 907 (1078)
+||||+++|+|.++++. ....+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 189 lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~ 263 (377)
T 3cbl_A 189 IVMELVQGGDFLTFLRT--EGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREE 263 (377)
T ss_dssp EEEECCTTCBHHHHHHH--HGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEEcCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceec
Confidence 99999999999999953 234589999999999999999999999 9999999999999999999999999999865
Q ss_pred cCCCC--CceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccchhhhhhhhhhhcCCCCCC
Q 039595 908 EPYSS--NRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSINFSSFSNMIIEVNQILDPRLST 984 (1078)
Q Consensus 908 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 984 (1078)
..... ......+++.|+|||.+.+..++.++|||||||++|||++ |+.||...... .....+. ... +...
T Consensus 264 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~--~~~~~~~---~~~--~~~~ 336 (377)
T 3cbl_A 264 ADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ--QTREFVE---KGG--RLPC 336 (377)
T ss_dssp TTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH--HHHHHHH---TTC--CCCC
T ss_pred CCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHH---cCC--CCCC
Confidence 33211 1112345778999999998899999999999999999998 99997543321 1111111 111 1111
Q ss_pred CCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhh
Q 039595 985 PSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHI 1022 (1078)
Q Consensus 985 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~ 1022 (1078)
..... ..+.+++.+||+.||++|||++++++..-
T Consensus 337 -~~~~~---~~l~~li~~cl~~dP~~Rps~~~i~~~L~ 370 (377)
T 3cbl_A 337 -PELCP---DAVFRLMEQCWAYEPGQRPSFSTIYQELQ 370 (377)
T ss_dssp -CTTCC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -CCCCC---HHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 11112 25778899999999999999999987654
No 168
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.4e-38 Score=365.19 Aligned_cols=254 Identities=21% Similarity=0.387 Sum_probs=193.3
Q ss_pred hcCCCccceeccCCceeEEEEEeC----CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCe
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP----SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARH 825 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 825 (1078)
.++|++.+.||+|+||.||+|+.+ ++..||||+++... .....+.+.+|+.++++++||||+++++++.++..
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 120 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY---TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP 120 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCc
Confidence 357999999999999999999764 57789999986542 34456789999999999999999999999999999
Q ss_pred eEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccc
Q 039595 826 SFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAK 905 (1078)
Q Consensus 826 ~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~ 905 (1078)
.++||||+++|+|.++++.. ...+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 121 ~~lv~e~~~~~sL~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 195 (373)
T 2qol_A 121 VMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGR 195 (373)
T ss_dssp CEEEEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC----
T ss_pred eEEEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCcccc
Confidence 99999999999999999543 34689999999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCCC---ceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccchhhhhhhhhhhcCCC
Q 039595 906 FVEPYSSN---RTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSINFSSFSNMIIEVNQILDPR 981 (1078)
Q Consensus 906 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 981 (1078)
........ .....+++.|+|||++.+..++.++|||||||++|||++ |+.||..... ...... ........
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~--~~~~~~---i~~~~~~~ 270 (373)
T 2qol_A 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN--QDVIKA---VDEGYRLP 270 (373)
T ss_dssp ------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH--HHHHHH---HHTTEECC
T ss_pred ccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHH---HHcCCCCC
Confidence 76543221 122345778999999999999999999999999999998 9999753321 111111 11111111
Q ss_pred CCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhh
Q 039595 982 LSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHI 1022 (1078)
Q Consensus 982 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~ 1022 (1078)
. .... ...+.+++.+||+.||++||+++|+++..-
T Consensus 271 ~---~~~~---~~~l~~li~~cl~~dp~~RPs~~~i~~~L~ 305 (373)
T 2qol_A 271 P---PMDC---PAALYQLMLDCWQKDRNNRPKFEQIVSILD 305 (373)
T ss_dssp C---CTTC---BHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred C---Cccc---cHHHHHHHHHHhCcChhhCcCHHHHHHHHH
Confidence 1 1111 235788999999999999999999987643
No 169
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.5e-38 Score=354.32 Aligned_cols=266 Identities=21% Similarity=0.280 Sum_probs=205.2
Q ss_pred cCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEEE
Q 039595 751 DDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFLV 829 (1078)
Q Consensus 751 ~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 829 (1078)
++|+..+.||+|+||.||+|..+ +|+.||||++..... .....+.+.+|+.++++++||||+++++++..++..++|
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE--TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 80 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCcc--chhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEE
Confidence 67999999999999999999765 789999999865432 122346788999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccccccC
Q 039595 830 CEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVEP 909 (1078)
Q Consensus 830 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~~ 909 (1078)
|||++ |+|.+++... ....+++..+..++.|++.||+|||++ |++||||||+||+++.++.+||+|||.+.....
T Consensus 81 ~e~~~-~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 155 (299)
T 2r3i_A 81 FEFLH-QDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 155 (299)
T ss_dssp EECCS-EEHHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCC
T ss_pred EEccc-CCHHHHHHhh-hccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccC
Confidence 99998 5999998543 234588999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCceeeccccccccccccccCC-CCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhh------------
Q 039595 910 YSSNRTEFVGTFGYAAPEIAYTMR-ATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQ------------ 976 (1078)
Q Consensus 910 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~------------ 976 (1078)
.........||+.|+|||.+.+.. ++.++|||||||++|||++|+.||...... ............
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 234 (299)
T 2r3i_A 156 PVRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSM 234 (299)
T ss_dssp CSBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCTTTSTTGGGS
T ss_pred CccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHH-HHHHHHHHHhCCCchhhhhHhhcC
Confidence 433444567899999999988765 799999999999999999999997643321 111111000000
Q ss_pred -hcCCCCCCCCCcc-----HHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhh
Q 039595 977 -ILDPRLSTPSPGV-----MDKLISIMEVAILCLDESPEARPTMEKGFGHHIGY 1024 (1078)
Q Consensus 977 -~~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~ 1024 (1078)
...+.+....... .....++.+++.+||+.||++|||++|+++|+|+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~hp~~~ 288 (299)
T 2r3i_A 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288 (299)
T ss_dssp TTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGT
T ss_pred cccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcChhhh
Confidence 0001111000000 01123678999999999999999999999999975
No 170
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.4e-38 Score=365.16 Aligned_cols=257 Identities=24% Similarity=0.366 Sum_probs=207.2
Q ss_pred hhcCCCccceeccCCceeEEEEEeC--------CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcC-CCCceeeEEee
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAELP--------SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEI-RHRNIVKFHGF 819 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~ 819 (1078)
..++|++.+.||+|+||+||+|... .+..||||++.... .....+.+.+|+.+++++ +||||++++++
T Consensus 67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~ 143 (382)
T 3tt0_A 67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA---TEKDLSDLISEMEMMKMIGKHKNIINLLGA 143 (382)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc---CHHHHHHHHHHHHHHHHhcCCchhhhheee
Confidence 3468999999999999999999642 23579999997542 344567789999999999 99999999999
Q ss_pred eecCCeeEEEEeecCCCCHHHHhcCCCC-------------CCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCC
Q 039595 820 CSNARHSFLVCEYLHRGSLARILGNDAT-------------AKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSK 886 (1078)
Q Consensus 820 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~ 886 (1078)
+..++..++||||+++|+|.+++..... ...+++.+++.++.||+.||+|||++ +|+||||||+
T Consensus 144 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~ 220 (382)
T 3tt0_A 144 CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAAR 220 (382)
T ss_dssp ECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGG
T ss_pred eccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcc
Confidence 9999999999999999999999965331 24589999999999999999999999 9999999999
Q ss_pred CeeeCCCCcEEEecccccccccCCC--CCceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccc
Q 039595 887 NVLLDLEFEAHVSDFGIAKFVEPYS--SNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSIN 963 (1078)
Q Consensus 887 NIll~~~~~~kl~DfG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~ 963 (1078)
||+++.++.+||+|||+++...... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.....
T Consensus 221 NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~- 299 (382)
T 3tt0_A 221 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV- 299 (382)
T ss_dssp GEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-
T ss_pred eEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH-
Confidence 9999999999999999998765432 22334567889999999999999999999999999999999 9999753321
Q ss_pred ccchhhhhhhhhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhh
Q 039595 964 FSSFSNMIIEVNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHI 1022 (1078)
Q Consensus 964 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~ 1022 (1078)
...... ......+... .... .++.+++.+||+.||++|||++|++++..
T Consensus 300 -~~~~~~---~~~~~~~~~~---~~~~---~~l~~li~~~l~~dP~~Rps~~ell~~L~ 348 (382)
T 3tt0_A 300 -EELFKL---LKEGHRMDKP---SNCT---NELYMMMRDCWHAVPSQRPTFKQLVEDLD 348 (382)
T ss_dssp -HHHHHH---HHTTCCCCCC---SSCC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -HHHHHH---HHcCCCCCCC---ccCC---HHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111111 1111111111 1122 25778899999999999999999998764
No 171
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.2e-38 Score=354.43 Aligned_cols=263 Identities=22% Similarity=0.353 Sum_probs=201.2
Q ss_pred hcCCCccceeccCCceeEEEEEe-----CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeec--
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAEL-----PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSN-- 822 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-- 822 (1078)
.++|++.+.||+|+||+||+|++ .+++.||||++... .....+.+.+|+.++++++||||+++++++..
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 84 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG 84 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC----CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHH
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC----CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence 46899999999999999999974 36889999998653 34456788999999999999999999999854
Q ss_pred CCeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccc
Q 039595 823 ARHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFG 902 (1078)
Q Consensus 823 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 902 (1078)
....++||||+++|+|.+++... ...+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 85 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg 159 (295)
T 3ugc_A 85 RRNLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFG 159 (295)
T ss_dssp HTSCEEEEECCTTCBHHHHHHHC--GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCC
T ss_pred CCceEEEEEeCCCCCHHHHHHhc--ccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCc
Confidence 45689999999999999999543 33589999999999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCC---CceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccch-------hhhhh
Q 039595 903 IAKFVEPYSS---NRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSF-------SNMII 972 (1078)
Q Consensus 903 ~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~-------~~~~~ 972 (1078)
+++....... ......++..|+|||.+.+..++.++||||||+++|||++|..||.......... .....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (295)
T 3ugc_A 160 LTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 239 (295)
T ss_dssp SCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHH
T ss_pred ccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHH
Confidence 9987654322 1233457788999999999999999999999999999999999975432211000 00000
Q ss_pred hh-hhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhh
Q 039595 973 EV-NQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGY 1024 (1078)
Q Consensus 973 ~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~ 1024 (1078)
.. ................ ..+.+++.+||+.||++|||++|+++..-..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~---~~l~~li~~~l~~dp~~Rps~~el~~~L~~l 289 (295)
T 3ugc_A 240 HLIELLKNNGRLPRPDGCP---DEIYMIMTECWNNNVNQRPSFRDLALRVDQI 289 (295)
T ss_dssp HHHHHHHTTCCCCCCTTCC---HHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHhccCcCCCCcCcC---HHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 11 1111111111111222 3577889999999999999999999875533
No 172
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-38 Score=361.63 Aligned_cols=261 Identities=22% Similarity=0.392 Sum_probs=208.4
Q ss_pred HhhcCCCccceeccCCceeEEEEEeC------CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeee
Q 039595 748 KATDDFDEKFCIGKGGQGSVYKAELP------SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCS 821 (1078)
Q Consensus 748 ~~~~~~~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 821 (1078)
...++|++.+.||+|+||.||+|... +++.||||+++... .....+.+.+|+.++++++||||+++++++.
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 120 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA---SADMQADFQREAALMAEFDNPNIVKLLGVCA 120 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc---CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence 34578999999999999999999764 34789999987542 3344677999999999999999999999999
Q ss_pred cCCeeEEEEeecCCCCHHHHhcCCCC---------------------CCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEe
Q 039595 822 NARHSFLVCEYLHRGSLARILGNDAT---------------------AKELSWNRRINVIKGVANALSYLHHDCLPSIIH 880 (1078)
Q Consensus 822 ~~~~~~lv~E~~~~g~L~~~l~~~~~---------------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH 880 (1078)
+++..++||||+++|+|.+++..... ...+++.+++.++.||+.||+|||++ +|+|
T Consensus 121 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH 197 (343)
T 1luf_A 121 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVH 197 (343)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCC
T ss_pred cCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---Ceec
Confidence 99999999999999999999965321 25689999999999999999999999 9999
Q ss_pred cCCCCCCeeeCCCCcEEEecccccccccCCC--CCceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCC
Q 039595 881 RDISSKNVLLDLEFEAHVSDFGIAKFVEPYS--SNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPR 957 (1078)
Q Consensus 881 ~Dlk~~NIll~~~~~~kl~DfG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~ 957 (1078)
|||||+||+++.++.+||+|||+++...... .......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||
T Consensus 198 ~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 277 (343)
T 1luf_A 198 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY 277 (343)
T ss_dssp SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred CCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcC
Confidence 9999999999999999999999998664322 22344578899999999999999999999999999999999 99997
Q ss_pred CcccccccchhhhhhhhhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 958 DFFSINFSSFSNMIIEVNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 958 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
..... ...... +............. ..+.+++.+||+.||++|||+++++++.-...
T Consensus 278 ~~~~~--~~~~~~------~~~~~~~~~~~~~~---~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~ 334 (343)
T 1luf_A 278 YGMAH--EEVIYY------VRDGNILACPENCP---LELYNLMRLCWSKLPADRPSFCSIHRILQRMC 334 (343)
T ss_dssp TTSCH--HHHHHH------HHTTCCCCCCTTCC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred CCCCh--HHHHHH------HhCCCcCCCCCCCC---HHHHHHHHHHcccCcccCCCHHHHHHHHHHHH
Confidence 53321 111111 11111111111122 25778899999999999999999998765443
No 173
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=2.1e-38 Score=351.15 Aligned_cols=253 Identities=21% Similarity=0.277 Sum_probs=202.0
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcC-CCCceeeEEeeeecCCeeE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEI-RHRNIVKFHGFCSNARHSF 827 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 827 (1078)
.++|++.+.||+|+||+||+|... +++.||||++..... .......+.+|+..+..+ +||||+++++++.+++..+
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~ 87 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLA--GSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHML 87 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCT--TSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEeccccc--ccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEE
Confidence 467999999999999999999765 799999999976432 233456788899999998 9999999999999999999
Q ss_pred EEEeecCCCCHHHHhcCCCC-CCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCC-------------
Q 039595 828 LVCEYLHRGSLARILGNDAT-AKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLE------------- 893 (1078)
Q Consensus 828 lv~E~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~------------- 893 (1078)
+||||+++|+|.+++..... ...+++.+++.++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~ 164 (289)
T 1x8b_A 88 IQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDED 164 (289)
T ss_dssp EEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC---------------
T ss_pred EEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccccc
Confidence 99999999999999954321 25589999999999999999999999 99999999999999844
Q ss_pred ------CcEEEecccccccccCCCCCceeeccccccccccccccC-CCCccchhHHHHHHHHHHHhCCCCCCcccccccc
Q 039595 894 ------FEAHVSDFGIAKFVEPYSSNRTEFVGTFGYAAPEIAYTM-RATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSS 966 (1078)
Q Consensus 894 ------~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~ 966 (1078)
..+||+|||.+...... ....||+.|+|||.+.+. .++.++|||||||++|||++|.+|+.....
T Consensus 165 ~~~~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~---- 236 (289)
T 1x8b_A 165 DWASNKVMFKIGDLGHVTRISSP----QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ---- 236 (289)
T ss_dssp -----CCCEEECCCTTCEETTCS----CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH----
T ss_pred cccCCceEEEEcccccccccCCc----cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH----
Confidence 47999999999876542 234589999999999876 567899999999999999999987432111
Q ss_pred hhhhhhhhhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 967 FSNMIIEVNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 967 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
. . .+............. ..+.+++.+||+.||++|||++|+++|+|+..
T Consensus 237 -~---~---~~~~~~~~~~~~~~~---~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~ 285 (289)
T 1x8b_A 237 -W---H---EIRQGRLPRIPQVLS---QEFTELLKVMIHPDPERRPSAMALVKHSVLLS 285 (289)
T ss_dssp -H---H---HHHTTCCCCCSSCCC---HHHHHHHHHHTCSSGGGSCCHHHHHTCTTC--
T ss_pred -H---H---HHHcCCCCCCCcccC---HHHHHHHHHHhCCCcccCCCHHHHhhChHhhh
Confidence 0 1 111111111111122 25778899999999999999999999999764
No 174
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=355.94 Aligned_cols=258 Identities=27% Similarity=0.385 Sum_probs=206.7
Q ss_pred hhcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeE
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSF 827 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 827 (1078)
..++|++.+.||+|+||.||+|... +|+.||||++.... ..+.+.+|+.++++++||||+++++++......+
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 100 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES------DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLW 100 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS------CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH------HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEE
Confidence 4568999999999999999999665 68999999986532 2456889999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccccc
Q 039595 828 LVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFV 907 (1078)
Q Consensus 828 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~ 907 (1078)
+||||+++|+|.+++.. ....+++.+++.++.|++.||.|||+. +++||||||+||+++.++.+||+|||.+...
T Consensus 101 lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 175 (314)
T 3com_A 101 IVMEYCGAGSVSDIIRL--RNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQL 175 (314)
T ss_dssp EEEECCTTEEHHHHHHH--HTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEeecCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhh
Confidence 99999999999999842 235689999999999999999999999 9999999999999999999999999999877
Q ss_pred cCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCCC
Q 039595 908 EPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSP 987 (1078)
Q Consensus 908 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 987 (1078)
...........|++.|+|||.+.+..++.++||||||+++|+|++|+.||...... ...........+.... +
T Consensus 176 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~--~ 248 (314)
T 3com_A 176 TDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM-----RAIFMIPTNPPPTFRK--P 248 (314)
T ss_dssp BTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHHHHHHSCCCCCSS--G
T ss_pred hhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHhcCCCcccCC--c
Confidence 65444455667999999999999989999999999999999999999997533221 1111111111111111 1
Q ss_pred ccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhhh
Q 039595 988 GVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYCD 1026 (1078)
Q Consensus 988 ~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~~ 1026 (1078)
......+.+++.+||+.||++|||++|+++|+|+...
T Consensus 249 --~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~ 285 (314)
T 3com_A 249 --ELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSA 285 (314)
T ss_dssp --GGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTC
T ss_pred --ccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhcC
Confidence 1112367889999999999999999999999998753
No 175
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-38 Score=362.79 Aligned_cols=261 Identities=21% Similarity=0.277 Sum_probs=199.7
Q ss_pred hcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecC-----
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNA----- 823 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----- 823 (1078)
.++|+..+.||+|+||.||+|.. .+|+.||||++.... ......+.+.+|+.+++.++||||+++++++...
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~ 101 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF--QSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDD 101 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTT--SSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTT
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccc--cCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCcccc
Confidence 46899999999999999999965 579999999986542 2344567789999999999999999999999765
Q ss_pred -CeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccc
Q 039595 824 -RHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFG 902 (1078)
Q Consensus 824 -~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 902 (1078)
...|+||||+ +++|.++++. ..+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg 173 (367)
T 1cm8_A 102 FTDFYLVMPFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFG 173 (367)
T ss_dssp CCCCEEEEECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred CceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeee
Confidence 3469999999 7899999843 4589999999999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCCceeecccccccccccccc-CCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhh--------
Q 039595 903 IAKFVEPYSSNRTEFVGTFGYAAPEIAYT-MRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIE-------- 973 (1078)
Q Consensus 903 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~-------- 973 (1078)
+++.... .....+||+.|+|||++.+ ..++.++||||+||++|||++|+.||...+.. .....+..
T Consensus 174 ~a~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~l~~i~~~~g~~~~~ 248 (367)
T 1cm8_A 174 LARQADS---EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL--DQLKEIMKVTGTPPAE 248 (367)
T ss_dssp TCEECCS---SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHHHCCCCHH
T ss_pred ccccccc---ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHhcCCCCHH
Confidence 9987643 2345678999999999887 67999999999999999999999997633221 10000000
Q ss_pred ------------hhhhcCCCCCCCCC-ccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 974 ------------VNQILDPRLSTPSP-GVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 974 ------------~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
....+......... ........+.+++.+||..||++|||++|+++|||+..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~ 313 (367)
T 1cm8_A 249 FVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFES 313 (367)
T ss_dssp HHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTT
T ss_pred HHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHh
Confidence 00000000000000 00111236788999999999999999999999999864
No 176
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=3.8e-38 Score=356.43 Aligned_cols=259 Identities=21% Similarity=0.280 Sum_probs=203.6
Q ss_pred hcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCC-CCceeeEEeeeec--CCe
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIR-HRNIVKFHGFCSN--ARH 825 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~--~~~ 825 (1078)
.++|++.+.||+|+||+||+|.. .+++.||||++... ..+.+.+|+.++++++ ||||+++++++.+ ...
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~ 107 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRT 107 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCC
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc-------chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCc
Confidence 36899999999999999999965 57899999998643 2567889999999997 9999999999987 677
Q ss_pred eEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCC-cEEEeccccc
Q 039595 826 SFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEF-EAHVSDFGIA 904 (1078)
Q Consensus 826 ~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~-~~kl~DfG~a 904 (1078)
.++||||+++++|.++++ .+++.++..++.||+.||+|||++ +|+||||||+||+++.++ .+||+|||++
T Consensus 108 ~~lv~e~~~~~~l~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a 178 (330)
T 3nsz_A 108 PALVFEHVNNTDFKQLYQ------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLA 178 (330)
T ss_dssp EEEEEECCCCCCHHHHGG------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred eEEEEeccCchhHHHHHH------hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCc
Confidence 899999999999999883 388899999999999999999999 999999999999999776 8999999999
Q ss_pred ccccCCCCCceeecccccccccccccc-CCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhh-----------
Q 039595 905 KFVEPYSSNRTEFVGTFGYAAPEIAYT-MRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMII----------- 972 (1078)
Q Consensus 905 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~----------- 972 (1078)
+...... ......|+..|+|||.+.+ ..++.++||||+||++|||++|+.||...............
T Consensus 179 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 257 (330)
T 3nsz_A 179 EFYHPGQ-EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI 257 (330)
T ss_dssp EECCTTC-CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHH
T ss_pred eEcCCCC-ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHH
Confidence 8765432 3345678999999999887 67899999999999999999999997433222111111000
Q ss_pred -hhhhhcCC--------CCCCC------CCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 973 -EVNQILDP--------RLSTP------SPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 973 -~~~~~~~~--------~~~~~------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
......++ ..... .........++.+++.+||+.||++|||++|+++|+|+..
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~ 325 (330)
T 3nsz_A 258 DKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYT 325 (330)
T ss_dssp HHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTT
T ss_pred HHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhh
Confidence 00000000 00000 0000111246789999999999999999999999999764
No 177
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=3.2e-38 Score=351.57 Aligned_cols=265 Identities=23% Similarity=0.300 Sum_probs=211.0
Q ss_pred HhhcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccC-----ChhhHHHHHHHHHHHhcCC-CCceeeEEeee
Q 039595 748 KATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSG-----NMADQDEFLNVVLALNEIR-HRNIVKFHGFC 820 (1078)
Q Consensus 748 ~~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~ 820 (1078)
...++|++.+.||+|+||.||+|..+ +|+.||||++....... .....+.+.+|+.+++++. ||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 34578999999999999999999764 68999999997543111 1123456789999999995 99999999999
Q ss_pred ecCCeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEec
Q 039595 821 SNARHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSD 900 (1078)
Q Consensus 821 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~D 900 (1078)
..+...++||||+++|+|.+++.. ...+++.+++.++.||+.||+|||++ +++||||||+||+++.++.+||+|
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~d 167 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTE---KVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTD 167 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECC
T ss_pred ccCCeEEEEEeccCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEec
Confidence 999999999999999999999943 35689999999999999999999999 999999999999999999999999
Q ss_pred ccccccccCCCCCceeeccccccccccccc------cCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhh
Q 039595 901 FGIAKFVEPYSSNRTEFVGTFGYAAPEIAY------TMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEV 974 (1078)
Q Consensus 901 fG~a~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~ 974 (1078)
||.+...... .......|++.|+|||++. ...++.++||||||+++|||++|+.||..... ......
T Consensus 168 fg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~~---- 240 (298)
T 1phk_A 168 FGFSCQLDPG-EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ--MLMLRM---- 240 (298)
T ss_dssp CTTCEECCTT-CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHH----
T ss_pred ccchhhcCCC-cccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH--HHHHHH----
Confidence 9999876542 2334567899999999885 45678999999999999999999999753321 111111
Q ss_pred hhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhhhH
Q 039595 975 NQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYCDE 1027 (1078)
Q Consensus 975 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~~~ 1027 (1078)
+.........+........+.+++.+||+.||++|||++|+++|+|+....
T Consensus 241 --~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~ 291 (298)
T 1phk_A 241 --IMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV 291 (298)
T ss_dssp --HHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC
T ss_pred --HhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhcc
Confidence 111111111111122234678999999999999999999999999987543
No 178
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=3.2e-38 Score=354.34 Aligned_cols=257 Identities=23% Similarity=0.353 Sum_probs=207.0
Q ss_pred hhcCCCccceeccCCceeEEEEEe------CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeec
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAEL------PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSN 822 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 822 (1078)
..++|++.+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|+.++++++||||+++++++.+
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 97 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA---SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ 97 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC---CHHHHHHHHHHHHHHhhCCCCceeeEEEEEec
Confidence 356899999999999999999965 245789999987542 34456778999999999999999999999999
Q ss_pred CCeeEEEEeecCCCCHHHHhcCCCC---------------------CCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEec
Q 039595 823 ARHSFLVCEYLHRGSLARILGNDAT---------------------AKELSWNRRINVIKGVANALSYLHHDCLPSIIHR 881 (1078)
Q Consensus 823 ~~~~~lv~E~~~~g~L~~~l~~~~~---------------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~ 881 (1078)
++..++||||+++|+|.+++..... ...+++.+++.++.||+.||+|||++ +|+||
T Consensus 98 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~ 174 (314)
T 2ivs_A 98 DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHR 174 (314)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECC
T ss_pred CCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCccc
Confidence 9999999999999999999965332 23489999999999999999999999 99999
Q ss_pred CCCCCCeeeCCCCcEEEecccccccccCCCCC--ceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCC
Q 039595 882 DISSKNVLLDLEFEAHVSDFGIAKFVEPYSSN--RTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRD 958 (1078)
Q Consensus 882 Dlk~~NIll~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~ 958 (1078)
||||+||+++.++.+||+|||+++........ .....+|+.|+|||.+.+..++.++||||+||++|||++ |+.||.
T Consensus 175 dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 254 (314)
T 2ivs_A 175 DLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYP 254 (314)
T ss_dssp CCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred ccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999876543221 233457889999999999899999999999999999999 999975
Q ss_pred cccccccchhhhhhhhhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhh
Q 039595 959 FFSINFSSFSNMIIEVNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHI 1022 (1078)
Q Consensus 959 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~ 1022 (1078)
.... ........ ....+... .... ..+.+++.+||+.||++|||++|++++.-
T Consensus 255 ~~~~--~~~~~~~~---~~~~~~~~---~~~~---~~~~~li~~~l~~dp~~Rps~~~l~~~l~ 307 (314)
T 2ivs_A 255 GIPP--ERLFNLLK---TGHRMERP---DNCS---EEMYRLMLQCWKQEPDKRPVFADISKDLE 307 (314)
T ss_dssp TCCG--GGHHHHHH---TTCCCCCC---TTCC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCH--HHHHHHhh---cCCcCCCC---ccCC---HHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 4332 11111111 11111111 1112 35778999999999999999999998854
No 179
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=3.4e-38 Score=352.54 Aligned_cols=260 Identities=20% Similarity=0.267 Sum_probs=204.2
Q ss_pred hhcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeee--ecCCe
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFC--SNARH 825 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~--~~~~~ 825 (1078)
..++|++.+.||+|+||.||+|... +++.||+|++............+.+.+|+.++++++||||+++++++ .+...
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 3478999999999999999999764 68999999997654333334567899999999999999999999998 45568
Q ss_pred eEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccc
Q 039595 826 SFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAK 905 (1078)
Q Consensus 826 ~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~ 905 (1078)
.++||||+++| +.+++... ....+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||.+.
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~ 157 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSV-PEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAE 157 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHS-TTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEehhccCC-HHHHHHhC-cccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecccccc
Confidence 89999999986 77777443 345689999999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCC--CceeeccccccccccccccCC--CCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCC
Q 039595 906 FVEPYSS--NRTEFVGTFGYAAPEIAYTMR--ATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPR 981 (1078)
Q Consensus 906 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 981 (1078)
....... ......||+.|+|||++.+.. ++.++||||+|+++|||++|+.||..... ......+.. ..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~i~~------~~ 229 (305)
T 2wtk_C 158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI--YKLFENIGK------GS 229 (305)
T ss_dssp ECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHH------CC
T ss_pred ccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH--HHHHHHHhc------CC
Confidence 7654222 233557899999999988654 37899999999999999999999763221 111111111 11
Q ss_pred CCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 982 LSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 982 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
...+ .... ..+.+++.+||+.||++|||++|+++|+|+..
T Consensus 230 ~~~~-~~~~---~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~ 269 (305)
T 2wtk_C 230 YAIP-GDCG---PPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRK 269 (305)
T ss_dssp CCCC-SSSC---HHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHS
T ss_pred CCCC-CccC---HHHHHHHHHHccCChhhCCCHHHHhcCccccc
Confidence 1111 1111 25678999999999999999999999999754
No 180
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=2.6e-38 Score=354.94 Aligned_cols=258 Identities=22% Similarity=0.368 Sum_probs=207.8
Q ss_pred hhcCCCccceeccCCceeEEEEEe------CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcC-CCCceeeEEeeee
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAEL------PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEI-RHRNIVKFHGFCS 821 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 821 (1078)
..++|++.+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|+.+++++ +||||+++++++.
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 97 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA---HLTEREALMSELKVLSYLGNHMNIVNLLGACT 97 (313)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch---hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEe
Confidence 456899999999999999999974 356789999997542 334567899999999999 9999999999999
Q ss_pred cCCeeEEEEeecCCCCHHHHhcCCCC---------------CCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCC
Q 039595 822 NARHSFLVCEYLHRGSLARILGNDAT---------------AKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSK 886 (1078)
Q Consensus 822 ~~~~~~lv~E~~~~g~L~~~l~~~~~---------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~ 886 (1078)
+++..++||||+++|+|.+++..... ...+++.+++.++.|++.||+|||++ +|+||||||+
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~ 174 (313)
T 1t46_A 98 IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAAR 174 (313)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGG
T ss_pred cCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccc
Confidence 99999999999999999999964322 22589999999999999999999999 9999999999
Q ss_pred CeeeCCCCcEEEecccccccccCCCCC--ceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccc
Q 039595 887 NVLLDLEFEAHVSDFGIAKFVEPYSSN--RTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSIN 963 (1078)
Q Consensus 887 NIll~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~ 963 (1078)
||+++.++.+||+|||.++........ .....||+.|+|||.+.+..++.++||||||+++|||++ |+.||......
T Consensus 175 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~ 254 (313)
T 1t46_A 175 NILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD 254 (313)
T ss_dssp GEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS
T ss_pred eEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch
Confidence 999999999999999999877543322 234457889999999999999999999999999999999 99997643321
Q ss_pred ccchhhhhhhhhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhh
Q 039595 964 FSSFSNMIIEVNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHI 1022 (1078)
Q Consensus 964 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~ 1022 (1078)
. ..... ......+... ... ...+.+++.+||+.||++|||++|++++.-
T Consensus 255 ~-~~~~~---~~~~~~~~~~---~~~---~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 303 (313)
T 1t46_A 255 S-KFYKM---IKEGFRMLSP---EHA---PAEMYDIMKTCWDADPLKRPTFKQIVQLIE 303 (313)
T ss_dssp H-HHHHH---HHHTCCCCCC---TTS---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred h-HHHHH---hccCCCCCCc---ccC---CHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 1 11111 1111111111 111 235788999999999999999999998754
No 181
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=3.2e-39 Score=371.92 Aligned_cols=251 Identities=15% Similarity=0.135 Sum_probs=195.5
Q ss_pred hcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHH---HHHhcCCCCceeeEE-------e
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVV---LALNEIRHRNIVKFH-------G 818 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~---~~l~~l~h~niv~l~-------~ 818 (1078)
.++|++.+.||+|+||+||+|.. .+|+.||||++...... .....+.+.+|+ ..+++++|||||+++ +
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~ 150 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERP-PSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 150 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-C-CTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeecccc-chHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence 46789999999999999999975 56999999999754322 334567789999 555666899999998 6
Q ss_pred eeecCC-----------------eeEEEEeecCCCCHHHHhcCCC----CCCcCCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 039595 819 FCSNAR-----------------HSFLVCEYLHRGSLARILGNDA----TAKELSWNRRINVIKGVANALSYLHHDCLPS 877 (1078)
Q Consensus 819 ~~~~~~-----------------~~~lv~E~~~~g~L~~~l~~~~----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ 877 (1078)
++++++ ..|+||||+ +|+|.+++.... ....+++..++.++.||+.||+|||++ +
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ 226 (377)
T 3byv_A 151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---G 226 (377)
T ss_dssp EEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred hhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---C
Confidence 665543 278999999 679999995421 112344588889999999999999999 9
Q ss_pred cEecCCCCCCeeeCCCCcEEEecccccccccCCCCCceeeccccccccccccccC-----------CCCccchhHHHHHH
Q 039595 878 IIHRDISSKNVLLDLEFEAHVSDFGIAKFVEPYSSNRTEFVGTFGYAAPEIAYTM-----------RATEKYDVYSFGVL 946 (1078)
Q Consensus 878 ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~sDvwSlG~i 946 (1078)
|+||||||+|||++.++.+||+|||+++... .......| +.|+|||++.+. .++.++|||||||+
T Consensus 227 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~---~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 227 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDG---ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETT---CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred eecCCCCHHHEEEcCCCCEEEEechhheecC---CcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 9999999999999999999999999998543 23445677 999999999987 89999999999999
Q ss_pred HHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 947 VFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 947 l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
+|||++|+.||...... .... .+.. .. .... ..+.+++.+||+.||++|||++|+++|+|+..
T Consensus 303 l~elltg~~Pf~~~~~~--~~~~------~~~~-~~----~~~~---~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~ 365 (377)
T 3byv_A 303 IYWIWCADLPITKDAAL--GGSE------WIFR-SC----KNIP---QPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ 365 (377)
T ss_dssp HHHHHHSSCCC--------CCSG------GGGS-SC----CCCC---HHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHH
T ss_pred HHHHHHCCCCCcccccc--cchh------hhhh-hc----cCCC---HHHHHHHHHHcCCCchhCCCHHHHhhChHHHH
Confidence 99999999997533221 1111 1111 11 1111 25778999999999999999999999999764
No 182
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=9e-39 Score=356.71 Aligned_cols=259 Identities=23% Similarity=0.370 Sum_probs=203.2
Q ss_pred hhcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeE
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSF 827 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 827 (1078)
..++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++..++..+
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 92 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS----EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLW 92 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC--------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC----HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEE
Confidence 3468999999999999999999765 68999999986542 334678899999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccccc
Q 039595 828 LVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFV 907 (1078)
Q Consensus 828 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~ 907 (1078)
+||||+++|+|.+++... ...+++.+++.++.|++.||.|||+. +++||||||+||+++.++.+||+|||++...
T Consensus 93 lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 167 (302)
T 2j7t_A 93 IMIEFCPGGAVDAIMLEL--DRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKN 167 (302)
T ss_dssp EEEECCTTEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHH
T ss_pred EEEEeCCCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccc
Confidence 999999999999988432 34589999999999999999999999 9999999999999999999999999998644
Q ss_pred cCCCCCceeecccccccccccc-----ccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCC
Q 039595 908 EPYSSNRTEFVGTFGYAAPEIA-----YTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRL 982 (1078)
Q Consensus 908 ~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 982 (1078)
...........||+.|+|||++ .+..++.++||||||+++|||++|+.||...... . ..........+..
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~---~~~~~~~~~~~~~ 242 (302)
T 2j7t_A 168 LKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM--R---VLLKIAKSDPPTL 242 (302)
T ss_dssp HHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH--H---HHHHHHHSCCCCC
T ss_pred cccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH--H---HHHHHhccCCccc
Confidence 3222223445789999999998 3667899999999999999999999997643321 1 1111111111111
Q ss_pred CCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 983 STPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 983 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
. ... .....+.+++.+||+.||++|||++|+++|+|+..
T Consensus 243 ~-~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~ 281 (302)
T 2j7t_A 243 L-TPS---KWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSS 281 (302)
T ss_dssp S-SGG---GSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTT
T ss_pred C-Ccc---ccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhh
Confidence 1 111 11235788999999999999999999999999774
No 183
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=6.3e-39 Score=358.11 Aligned_cols=269 Identities=27% Similarity=0.377 Sum_probs=189.9
Q ss_pred HhhcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCee
Q 039595 748 KATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHS 826 (1078)
Q Consensus 748 ~~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 826 (1078)
...++|++.+.||+|+||.||+|... +++.||||++..... ....+.+.+|+.++++++||||+++++++...+..
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 88 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC---QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDEL 88 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC-------------------CCCCCCCTTBCCEEEEEESSSCE
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc---chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCc
Confidence 34578999999999999999999654 689999999865421 23356788999999999999999999999999999
Q ss_pred EEEEeecCCCCHHHHhcC-----CCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecc
Q 039595 827 FLVCEYLHRGSLARILGN-----DATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDF 901 (1078)
Q Consensus 827 ~lv~E~~~~g~L~~~l~~-----~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Df 901 (1078)
++||||+++|+|.+++.. ......+++..++.++.||+.||+|||++ +++||||||+||+++.++.+||+||
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~df 165 (303)
T 2vwi_A 89 WLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADF 165 (303)
T ss_dssp EEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCC
T ss_pred EEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEec
Confidence 999999999999999853 12345689999999999999999999999 9999999999999999999999999
Q ss_pred cccccccCCCC-----Cceeecccccccccccccc-CCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhh
Q 039595 902 GIAKFVEPYSS-----NRTEFVGTFGYAAPEIAYT-MRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVN 975 (1078)
Q Consensus 902 G~a~~~~~~~~-----~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~ 975 (1078)
|.+........ ......||+.|+|||.+.+ ..++.++||||||+++|||++|+.||....... ..... .
T Consensus 166 g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~---~ 240 (303)
T 2vwi_A 166 GVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK--VLMLT---L 240 (303)
T ss_dssp HHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG--HHHHH---H
T ss_pred cchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh--HHHHH---h
Confidence 99986643221 1234578999999999876 568999999999999999999999976433211 10000 0
Q ss_pred hhcCCCCCCC---CCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhhhH
Q 039595 976 QILDPRLSTP---SPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYCDE 1027 (1078)
Q Consensus 976 ~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~~~ 1027 (1078)
....+..... ..........+.+++.+||+.||++|||++|+++|+|+...+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~ 295 (303)
T 2vwi_A 241 QNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK 295 (303)
T ss_dssp TSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC----
T ss_pred ccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhcCC
Confidence 0000111000 000001123577899999999999999999999999986543
No 184
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=2.6e-38 Score=363.34 Aligned_cols=263 Identities=22% Similarity=0.284 Sum_probs=197.2
Q ss_pred hcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCC----
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNAR---- 824 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~---- 824 (1078)
.++|++.+.||+|+||.||+|.. .+++.||||++.... ......+.+.+|+.+++.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 101 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF--QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 101 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTT--SSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTT
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEecccc--CChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccc
Confidence 46899999999999999999965 478899999997542 23445677889999999999999999999997654
Q ss_pred --eeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccc
Q 039595 825 --HSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFG 902 (1078)
Q Consensus 825 --~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 902 (1078)
..|+||||+++ +|.+++. ..+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 172 (371)
T 2xrw_A 102 FQDVYIVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 172 (371)
T ss_dssp CCEEEEEEECCSE-EHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred ccceEEEEEcCCC-CHHHHHh-----hccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEee
Confidence 78999999976 7888883 3488999999999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhh----------
Q 039595 903 IAKFVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMII---------- 972 (1078)
Q Consensus 903 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~---------- 972 (1078)
+++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...+... .......
T Consensus 173 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~ 250 (371)
T 2xrw_A 173 LARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-QWNKVIEQLGTPCPEFM 250 (371)
T ss_dssp C-----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHC-CCCCCHHHH
T ss_pred cccccccc-cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHH
Confidence 99866432 22345689999999999999999999999999999999999999976432210 0000000
Q ss_pred -----hhhhh--cCCCCCC------------CCC--ccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 973 -----EVNQI--LDPRLST------------PSP--GVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 973 -----~~~~~--~~~~~~~------------~~~--~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
..... ..+.... +.. ........+.+++.+||..||++|||++|+++|||+..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 324 (371)
T 2xrw_A 251 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV 324 (371)
T ss_dssp TTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHT
T ss_pred HHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhh
Confidence 00000 0011100 000 01112457889999999999999999999999999764
No 185
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.2e-38 Score=366.49 Aligned_cols=263 Identities=9% Similarity=-0.012 Sum_probs=187.1
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHH---HHHhcCCCCceeeEE-------e
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVV---LALNEIRHRNIVKFH-------G 818 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~---~~l~~l~h~niv~l~-------~ 818 (1078)
..+|+..+.||+|+||+||+|.+. +|+.||||++...... .....+.+.+|+ ..++. +||||++++ +
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d 138 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAEN-SRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSD 138 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTT-HHHHHHHHHHHHHHHHHHHC-----------CBCCCCE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccc-cccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeeh
Confidence 346899999999999999999754 7899999999875322 234456677784 45555 799988755 4
Q ss_pred eeecC-----------------CeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHH------HHHHHHHHHHHHHHHhcCC
Q 039595 819 FCSNA-----------------RHSFLVCEYLHRGSLARILGNDATAKELSWNRR------INVIKGVANALSYLHHDCL 875 (1078)
Q Consensus 819 ~~~~~-----------------~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~------~~i~~~i~~~L~~LH~~~~ 875 (1078)
++... ...|+||||++ |+|.+++... ...+.+..+ ..++.||+.||+|||++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~-- 213 (371)
T 3q60_A 139 AVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL--DFVYVFRGDEGILALHILTAQLIRLAANLQSK-- 213 (371)
T ss_dssp EEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH--HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT--
T ss_pred heecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh--ccccchhhhhhhhhHHHHHHHHHHHHHHHHHC--
Confidence 44322 34799999999 7999999543 123344555 67889999999999999
Q ss_pred CCcEecCCCCCCeeeCCCCcEEEecccccccccCCCCCceeecccccccccccccc--CCCCccchhHHHHHHHHHHHhC
Q 039595 876 PSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVEPYSSNRTEFVGTFGYAAPEIAYT--MRATEKYDVYSFGVLVFEVIKG 953 (1078)
Q Consensus 876 ~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlG~il~elltG 953 (1078)
+|+||||||+|||++.++.+||+|||+++.... ......+|+.|+|||++.+ ..++.++|||||||++|||++|
T Consensus 214 -~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg 289 (371)
T 3q60_A 214 -GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGT---RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCL 289 (371)
T ss_dssp -TEEETTCSGGGEEECTTSCEEECCGGGEEETTC---EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHS
T ss_pred -CCccCcCCHHHEEECCCCCEEEEecceeeecCC---CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhC
Confidence 999999999999999999999999999986542 2224567799999999987 7799999999999999999999
Q ss_pred CCCCCcccccccchhhhhhhhhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhhh
Q 039595 954 NHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYCD 1026 (1078)
Q Consensus 954 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~~ 1026 (1078)
+.||............... ...........+. .......+.+++.+||+.||++|||++|+++|||+...
T Consensus 290 ~~Pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~ 359 (371)
T 3q60_A 290 FLPFGLVTPGIKGSWKRPS-LRVPGTDSLAFGS--CTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQL 359 (371)
T ss_dssp SCSTTBCCTTCTTCCCBCC-TTSCCCCSCCCTT--SSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHH
T ss_pred CCCCCCcCcccccchhhhh-hhhccccccchhh--ccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHH
Confidence 9998654322111100000 0000111111111 01112367889999999999999999999999997643
No 186
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.8e-38 Score=358.42 Aligned_cols=259 Identities=25% Similarity=0.369 Sum_probs=200.3
Q ss_pred HhhcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcC-CCCceeeEEeeeec---
Q 039595 748 KATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEI-RHRNIVKFHGFCSN--- 822 (1078)
Q Consensus 748 ~~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~--- 822 (1078)
...++|++.+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+.+++++ +||||+++++++..
T Consensus 21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~ 95 (326)
T 2x7f_A 21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNP 95 (326)
T ss_dssp CCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-----STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC-
T ss_pred CCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-----ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccC
Confidence 4567899999999999999999976 478999999986532 2346788999999998 89999999999976
Q ss_pred ---CCeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEe
Q 039595 823 ---ARHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVS 899 (1078)
Q Consensus 823 ---~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~ 899 (1078)
....++||||+++|+|.+++... ....+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~ 171 (326)
T 2x7f_A 96 PGMDDQLWLVMEFCGAGSVTDLIKNT-KGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLV 171 (326)
T ss_dssp -CCCCEEEEEEECCTTEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEEC
T ss_pred ccccceEEEEEEcCCCCcHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEe
Confidence 56889999999999999999543 235689999999999999999999999 99999999999999999999999
Q ss_pred cccccccccCCCCCceeeccccccccccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhh
Q 039595 900 DFGIAKFVEPYSSNRTEFVGTFGYAAPEIAY-----TMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEV 974 (1078)
Q Consensus 900 DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~ 974 (1078)
|||++..............|++.|+|||++. +..++.++|||||||++|||++|+.||...... .. ....
T Consensus 172 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~---~~~~ 246 (326)
T 2x7f_A 172 DFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM--RA---LFLI 246 (326)
T ss_dssp CCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH--HH---HHHH
T ss_pred eCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH--HH---HHHh
Confidence 9999987654434445567999999999987 567899999999999999999999997533221 11 1111
Q ss_pred hhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 975 NQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 975 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
.....+... ..... ..+.+++.+||+.||++|||++|+++|+|+..
T Consensus 247 ~~~~~~~~~--~~~~~---~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~ 292 (326)
T 2x7f_A 247 PRNPAPRLK--SKKWS---KKFQSFIESCLVKNHSQRPATEQLMKHPFIRD 292 (326)
T ss_dssp HHSCCCCCS--CSCSC---HHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHC
T ss_pred hcCccccCC--ccccC---HHHHHHHHHHhccChhhCCCHHHHhhChHHhh
Confidence 111111111 11112 25778899999999999999999999999764
No 187
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.4e-38 Score=350.97 Aligned_cols=251 Identities=27% Similarity=0.390 Sum_probs=195.1
Q ss_pred cCCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEEEE
Q 039595 751 DDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFLVC 830 (1078)
Q Consensus 751 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 830 (1078)
++|++.+.||+|+||+||+|+.. ++.||||++... ...+.+.+|+.++++++||||+++++++.+ ..++||
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~------~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~ 78 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE------SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVM 78 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST------THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEE
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh------hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEE
Confidence 57889999999999999999875 788999998532 346678999999999999999999999874 479999
Q ss_pred eecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCc-EEEecccccccccC
Q 039595 831 EYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFE-AHVSDFGIAKFVEP 909 (1078)
Q Consensus 831 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~-~kl~DfG~a~~~~~ 909 (1078)
||+++|+|.+++........+++.+++.++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||++.....
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~ 158 (307)
T 2eva_A 79 EYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT 158 (307)
T ss_dssp ECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------
T ss_pred EcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc
Confidence 99999999999976555556889999999999999999999932229999999999999998886 79999999976543
Q ss_pred CCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCCCcc
Q 039595 910 YSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSPGV 989 (1078)
Q Consensus 910 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 989 (1078)
......||+.|+|||.+.+..++.++||||||+++|||++|+.||+........... .......+... ...
T Consensus 159 ---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~---~~~ 229 (307)
T 2eva_A 159 ---HMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMW---AVHNGTRPPLI---KNL 229 (307)
T ss_dssp ---------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHH---HHHTTCCCCCB---TTC
T ss_pred ---ccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHH---HHhcCCCCCcc---ccc
Confidence 223456899999999999999999999999999999999999997643322111111 11111111111 111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCChhHHHHHhh
Q 039595 990 MDKLISIMEVAILCLDESPEARPTMEKGFGHHI 1022 (1078)
Q Consensus 990 ~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~ 1022 (1078)
. ..+.+++.+||+.||++|||++|++++..
T Consensus 230 ~---~~l~~li~~~l~~dp~~Rps~~ell~~L~ 259 (307)
T 2eva_A 230 P---KPIESLMTRCWSKDPSQRPSMEEIVKIMT 259 (307)
T ss_dssp C---HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred C---HHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 1 25778899999999999999999987654
No 188
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.6e-37 Score=343.83 Aligned_cols=254 Identities=28% Similarity=0.461 Sum_probs=201.1
Q ss_pred hcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhH---HHHHHHHHHHhcCCCCceeeEEeeeecCCe
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQ---DEFLNVVLALNEIRHRNIVKFHGFCSNARH 825 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~---~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 825 (1078)
.++|++.+.||+|+||+||+|.. .+++.||+|++............ +.+.+|+.++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 36899999999999999999966 47899999998765433222211 67899999999999999999999997665
Q ss_pred eEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCC--cEecCCCCCCeeeCCCCc-----EEE
Q 039595 826 SFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPS--IIHRDISSKNVLLDLEFE-----AHV 898 (1078)
Q Consensus 826 ~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlk~~NIll~~~~~-----~kl 898 (1078)
++||||+++|+|.+++... ...+++..++.++.|++.||+|||++ + |+||||||+||+++.++. +||
T Consensus 97 -~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl 170 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDK--AHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKV 170 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEE
T ss_pred -eEEEEecCCCCHHHHHhcc--cCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEe
Confidence 7999999999999988543 34689999999999999999999999 8 999999999999988876 999
Q ss_pred ecccccccccCCCCCceeeccccccccccccc--cCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhh
Q 039595 899 SDFGIAKFVEPYSSNRTEFVGTFGYAAPEIAY--TMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQ 976 (1078)
Q Consensus 899 ~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~ 976 (1078)
+|||+++.... ......||+.|+|||.+. ...++.++||||+||++|||++|+.||+............ ....
T Consensus 171 ~Dfg~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~--~~~~ 245 (287)
T 4f0f_A 171 ADFGLSQQSVH---SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINM--IREE 245 (287)
T ss_dssp CCCTTCBCCSS---CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHH--HHHS
T ss_pred CCCCccccccc---cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHH--Hhcc
Confidence 99999985432 345567999999999984 4567899999999999999999999986443321111111 1111
Q ss_pred hcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHh
Q 039595 977 ILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHH 1021 (1078)
Q Consensus 977 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~ 1021 (1078)
...+..... . ...+.+++.+||+.||++|||++|+++..
T Consensus 246 ~~~~~~~~~---~---~~~l~~li~~~l~~dp~~Rps~~~ll~~L 284 (287)
T 4f0f_A 246 GLRPTIPED---C---PPRLRNVIELCWSGDPKKRPHFSYIVKEL 284 (287)
T ss_dssp CCCCCCCTT---S---CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCCCCcc---c---CHHHHHHHHHHhcCChhhCcCHHHHHHHH
Confidence 122222211 1 13578899999999999999999999764
No 189
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=2.3e-38 Score=370.16 Aligned_cols=263 Identities=19% Similarity=0.219 Sum_probs=202.9
Q ss_pred hcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcC------CCCceeeEEeeeec
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEI------RHRNIVKFHGFCSN 822 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~l~~~~~~ 822 (1078)
..+|++.+.||+|+||+||+|.. .+++.||||++... ......+.+|+.+++.+ .|+||+++++++..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~ 170 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-----KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTF 170 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-----cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeeccc
Confidence 45799999999999999999965 46899999998643 23345677788777776 57799999999999
Q ss_pred CCeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCc--EEEec
Q 039595 823 ARHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFE--AHVSD 900 (1078)
Q Consensus 823 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~--~kl~D 900 (1078)
....++||||+. ++|.+++.... ...+++..++.++.||+.||+|||++ +|+||||||+|||++.++. +||+|
T Consensus 171 ~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~D 245 (429)
T 3kvw_A 171 RNHICMTFELLS-MNLYELIKKNK-FQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVID 245 (429)
T ss_dssp TTEEEEEECCCC-CBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECC
T ss_pred CCeEEEEEeccC-CCHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEee
Confidence 999999999996 59999885432 34589999999999999999999999 9999999999999999987 99999
Q ss_pred ccccccccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhh--------
Q 039595 901 FGIAKFVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMII-------- 972 (1078)
Q Consensus 901 fG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~-------- 972 (1078)
||+++.... .....+||+.|+|||++.+..++.++|||||||++|||++|++||....... .......
T Consensus 246 FG~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~-~l~~i~~~~~~p~~~ 321 (429)
T 3kvw_A 246 FGSSCYEHQ---RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGD-QLACMIELLGMPSQK 321 (429)
T ss_dssp CTTCEETTC---CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHH
T ss_pred cccceecCC---cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHcCCCCHH
Confidence 999976543 2334678999999999999999999999999999999999999976433210 0000000
Q ss_pred ------hhhhhcCCCC-----------------------------CCCCCccHHH-----HHHHHHHHHhcccCCCCCCC
Q 039595 973 ------EVNQILDPRL-----------------------------STPSPGVMDK-----LISIMEVAILCLDESPEARP 1012 (1078)
Q Consensus 973 ------~~~~~~~~~~-----------------------------~~~~~~~~~~-----~~~l~~li~~cl~~dP~~RP 1012 (1078)
.....++... .......... ...+.+++.+||+.||++||
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rp 401 (429)
T 3kvw_A 322 LLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRM 401 (429)
T ss_dssp HHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSC
T ss_pred HHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCC
Confidence 0000110000 0000000000 23578999999999999999
Q ss_pred ChhHHHHHhhhhhh
Q 039595 1013 TMEKGFGHHIGYCD 1026 (1078)
Q Consensus 1013 t~~ell~h~~~~~~ 1026 (1078)
|++|+++|||+...
T Consensus 402 ta~e~L~Hpw~~~~ 415 (429)
T 3kvw_A 402 TPGQALRHPWLRRR 415 (429)
T ss_dssp CHHHHHTSTTTC--
T ss_pred CHHHHhCChhhccC
Confidence 99999999998753
No 190
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=4e-38 Score=364.98 Aligned_cols=267 Identities=21% Similarity=0.287 Sum_probs=208.7
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCC--ee
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNAR--HS 826 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~ 826 (1078)
.++|++.+.||+|+||+||+|... +|+.||||++..... ....+.+.+|+.++++++||||+++++++.+.. ..
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 84 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF---LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHK 84 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG---GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc---cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCee
Confidence 367999999999999999999765 699999999975432 233567789999999999999999999997654 78
Q ss_pred EEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeee----CCCCcEEEeccc
Q 039595 827 FLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLL----DLEFEAHVSDFG 902 (1078)
Q Consensus 827 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll----~~~~~~kl~DfG 902 (1078)
++||||+++|+|.+++........+++.+++.++.||+.||+|||++ +|+||||||+||++ +.++.+||+|||
T Consensus 85 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG 161 (396)
T 4eut_A 85 VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161 (396)
T ss_dssp EEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGG
T ss_pred EEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCC
Confidence 99999999999999996654445599999999999999999999999 99999999999999 778889999999
Q ss_pred ccccccCCCCCceeecccccccccccccc--------CCCCccchhHHHHHHHHHHHhCCCCCCccccccc--chhhhhh
Q 039595 903 IAKFVEPYSSNRTEFVGTFGYAAPEIAYT--------MRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFS--SFSNMII 972 (1078)
Q Consensus 903 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~--~~~~~~~ 972 (1078)
+++...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ .....+.
T Consensus 162 ~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~ 240 (396)
T 4eut_A 162 AARELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII 240 (396)
T ss_dssp GCEECCCGG-GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHH
T ss_pred CceEccCCC-ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHh
Confidence 998765422 2344679999999999875 5678899999999999999999999754322111 1111110
Q ss_pred hhh---------------hhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhh
Q 039595 973 EVN---------------QILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIG 1023 (1078)
Q Consensus 973 ~~~---------------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~ 1023 (1078)
... ..+.+..+............+.+++.+||+.||++||+++|++++...
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~ 306 (396)
T 4eut_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD 306 (396)
T ss_dssp HSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHH
T ss_pred cCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHH
Confidence 000 000111222222224455578899999999999999999999887644
No 191
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=3.5e-38 Score=345.86 Aligned_cols=251 Identities=18% Similarity=0.291 Sum_probs=201.2
Q ss_pred hcCCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecC--CeeE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNA--RHSF 827 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 827 (1078)
.++|++.+.||+|+||+||+|..+ ++.||||++.... ......+.+.+|+.++++++||||+++++++.+. ...+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 85 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRD--WSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPT 85 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTT--CCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccc--cCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeE
Confidence 468999999999999999999875 8899999997643 2344567799999999999999999999999876 7889
Q ss_pred EEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCC--cEecCCCCCCeeeCCCCcEEEecccccc
Q 039595 828 LVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPS--IIHRDISSKNVLLDLEFEAHVSDFGIAK 905 (1078)
Q Consensus 828 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlk~~NIll~~~~~~kl~DfG~a~ 905 (1078)
+||||+++|+|.+++... ....+++.+++.++.|++.||+|||++ + ++||||||+||+++.++.++++|||++.
T Consensus 86 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~ 161 (271)
T 3kmu_A 86 LITHWMPYGSLYNVLHEG-TNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKF 161 (271)
T ss_dssp EEEECCTTCBHHHHHHSC-SSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCC
T ss_pred eeecccCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEecccee
Confidence 999999999999999653 234689999999999999999999998 8 9999999999999999999999998876
Q ss_pred cccCCCCCceeeccccccccccccccCCCCc---cchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCC
Q 039595 906 FVEPYSSNRTEFVGTFGYAAPEIAYTMRATE---KYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRL 982 (1078)
Q Consensus 906 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 982 (1078)
.... ....||+.|+|||.+.+..++. ++|||||||++|||++|+.||...... .... ........+..
T Consensus 162 ~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~~--~~~~~~~~~~~ 232 (271)
T 3kmu_A 162 SFQS-----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNM--EIGM--KVALEGLRPTI 232 (271)
T ss_dssp TTSC-----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHH--HHHH--HHHHSCCCCCC
T ss_pred eecc-----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChH--HHHH--HHHhcCCCCCC
Confidence 4322 2347899999999998765544 899999999999999999997643221 1100 11111111222
Q ss_pred CCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhh
Q 039595 983 STPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHI 1022 (1078)
Q Consensus 983 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~ 1022 (1078)
.. ... ..+.+++.+||+.||++|||++|+++..-
T Consensus 233 ~~---~~~---~~~~~li~~~l~~~p~~Rps~~~il~~L~ 266 (271)
T 3kmu_A 233 PP---GIS---PHVSKLMKICMNEDPAKRPKFDMIVPILE 266 (271)
T ss_dssp CT---TCC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CC---CCC---HHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11 112 25778899999999999999999997654
No 192
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=2.8e-38 Score=372.84 Aligned_cols=252 Identities=23% Similarity=0.385 Sum_probs=203.2
Q ss_pred hhcCCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
..++|++.+.||+|+||+||+|.++++..||||+++... ...+.|.+|+.++++++||||+++++++. ....++
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~l 259 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-----MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYI 259 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-----BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEE
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-----ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEE
Confidence 456788999999999999999998888899999997542 24678999999999999999999999987 567899
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVE 908 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~ 908 (1078)
||||+++|+|.++++.. ....+++.+++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 260 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~ 335 (454)
T 1qcf_A 260 ITEFMAKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIE 335 (454)
T ss_dssp EECCCTTCBHHHHHHSH-HHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBC
T ss_pred EEeecCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcC
Confidence 99999999999999543 223588899999999999999999999 99999999999999999999999999998764
Q ss_pred CCC-CCceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccchhhhhhhhhhhcCCCCCCCC
Q 039595 909 PYS-SNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPS 986 (1078)
Q Consensus 909 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 986 (1078)
... .......+|+.|+|||++....++.++|||||||++|||++ |+.||..... ......+. ....... .
T Consensus 336 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~--~~~~~~i~---~~~~~~~---~ 407 (454)
T 1qcf_A 336 DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN--PEVIRALE---RGYRMPR---P 407 (454)
T ss_dssp CHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHHHHHH---HTCCCCC---C
T ss_pred CCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCH--HHHHHHHH---cCCCCCC---C
Confidence 321 11233456789999999998999999999999999999999 9999753322 11111111 1111111 1
Q ss_pred CccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHh
Q 039595 987 PGVMDKLISIMEVAILCLDESPEARPTMEKGFGHH 1021 (1078)
Q Consensus 987 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~ 1021 (1078)
.... ..+.+++.+||+.||++|||++++++..
T Consensus 408 ~~~~---~~l~~li~~cl~~dp~~RPt~~~i~~~L 439 (454)
T 1qcf_A 408 ENCP---EELYNIMMRCWKNRPEERPTFEYIQSVL 439 (454)
T ss_dssp TTSC---HHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCC---HHHHHHHHHHccCChhHCcCHHHHHHHH
Confidence 1112 2577889999999999999999988654
No 193
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.4e-38 Score=358.60 Aligned_cols=267 Identities=21% Similarity=0.348 Sum_probs=212.2
Q ss_pred HHHHHHhhcCCCccceeccCCceeEEEEEeC------CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeE
Q 039595 743 HEEIIKATDDFDEKFCIGKGGQGSVYKAELP------SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKF 816 (1078)
Q Consensus 743 ~~~~~~~~~~~~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l 816 (1078)
.+++....++|++.+.||+|+||.||+|... +++.||||++.... .......+.+|+.++++++||||+++
T Consensus 17 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~ 93 (322)
T 1p4o_A 17 PDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA---SMRERIEFLNEASVMKEFNCHHVVRL 93 (322)
T ss_dssp CCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS---CHHHHHHHHHHHHHGGGCCCTTBCCE
T ss_pred hhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc---CHHHHHHHHHHHHHHHhcCCCCEeee
Confidence 3445556789999999999999999999653 36789999987542 33456678999999999999999999
Q ss_pred EeeeecCCeeEEEEeecCCCCHHHHhcCCC-------CCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCee
Q 039595 817 HGFCSNARHSFLVCEYLHRGSLARILGNDA-------TAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVL 889 (1078)
Q Consensus 817 ~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~-------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIl 889 (1078)
++++.++...++||||+++|+|.+++.... ....+++.+++.++.||+.||+|||++ +|+||||||+||+
T Consensus 94 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIl 170 (322)
T 1p4o_A 94 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCM 170 (322)
T ss_dssp EEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEE
T ss_pred EEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEE
Confidence 999999999999999999999999985421 124578999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEecccccccccCCCC--CceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccc
Q 039595 890 LDLEFEAHVSDFGIAKFVEPYSS--NRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSINFSS 966 (1078)
Q Consensus 890 l~~~~~~kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~~~~ 966 (1078)
++.++.+||+|||+++....... ......+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||...... .
T Consensus 171 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~ 248 (322)
T 1p4o_A 171 VAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE--Q 248 (322)
T ss_dssp ECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH--H
T ss_pred EcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH--H
Confidence 99999999999999986643221 1233457889999999999999999999999999999999 89997543221 1
Q ss_pred hhhhhhhhhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhhh
Q 039595 967 FSNMIIEVNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYCD 1026 (1078)
Q Consensus 967 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~~ 1026 (1078)
... .+............. ..+.+++.+||+.||++|||++|++++......
T Consensus 249 ~~~------~~~~~~~~~~~~~~~---~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 249 VLR------FVMEGGLLDKPDNCP---DMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp HHH------HHHTTCCCCCCTTCC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred HHH------HHHcCCcCCCCCCCC---HHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 111 111111111112222 257788999999999999999999999765543
No 194
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=2.2e-38 Score=359.90 Aligned_cols=261 Identities=23% Similarity=0.353 Sum_probs=202.8
Q ss_pred hhcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHH-HhcCCCCceeeEEeeeecCCee
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLA-LNEIRHRNIVKFHGFCSNARHS 826 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~ 826 (1078)
..++|++.+.||+|+||+||+|.. .+|+.||||++..... .....++..|..+ ++.++||||+++++++.+++..
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~ 125 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN---SQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDV 125 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCC---CHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccC---cHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcE
Confidence 356899999999999999999975 5789999999976432 2233445555554 7888999999999999999999
Q ss_pred EEEEeecCCCCHHHHhcCC-CCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccc
Q 039595 827 FLVCEYLHRGSLARILGND-ATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAK 905 (1078)
Q Consensus 827 ~lv~E~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~ 905 (1078)
++||||+++ +|.+++... .....+++..++.++.||+.||+|||++. +|+||||||+||+++.++.+||+|||+++
T Consensus 126 ~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~ 202 (340)
T 3an0_A 126 WICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISG 202 (340)
T ss_dssp EEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHH
T ss_pred EEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCce
Confidence 999999986 998888431 13456899999999999999999999742 89999999999999999999999999998
Q ss_pred cccCCCCCceeeccccccccccccc----cCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCC
Q 039595 906 FVEPYSSNRTEFVGTFGYAAPEIAY----TMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPR 981 (1078)
Q Consensus 906 ~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 981 (1078)
..... .......||+.|+|||++. ...++.++|||||||++|||++|+.||+............ .....+.
T Consensus 203 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~----~~~~~~~ 277 (340)
T 3an0_A 203 YLVDS-VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV----VEEPSPQ 277 (340)
T ss_dssp HHSCH-HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHH----HHSCCCC
T ss_pred ecccc-cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHH----hcCCCCC
Confidence 76431 1223357999999999964 3478999999999999999999999976433221111111 1111111
Q ss_pred CCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 982 LSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 982 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
. ... .....+.+++.+||+.||++|||++|+++|+|+..
T Consensus 278 ~--~~~---~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~ 316 (340)
T 3an0_A 278 L--PAD---KFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTL 316 (340)
T ss_dssp C--CGG---GSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred C--Ccc---cCCHHHHHHHHHHccCCcccCcCHHHHhcCcCccc
Confidence 1 111 11236788999999999999999999999999764
No 195
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=5.7e-38 Score=347.45 Aligned_cols=260 Identities=23% Similarity=0.310 Sum_probs=208.4
Q ss_pred HhhcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCee
Q 039595 748 KATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHS 826 (1078)
Q Consensus 748 ~~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 826 (1078)
...++|++.+.||+|+||.||+|..+ +++.||||++...... ....+.+.+|+.++++++||||+++++++.+....
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 96 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK--NKDTSTILREVELLKKLDHPNIMKLFEILEDSSSF 96 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBS--SSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccc--hHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeE
Confidence 34578999999999999999999765 7899999999765322 33467789999999999999999999999999999
Q ss_pred EEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCC---CcEEEecccc
Q 039595 827 FLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLE---FEAHVSDFGI 903 (1078)
Q Consensus 827 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~---~~~kl~DfG~ 903 (1078)
++||||+++++|.+++.. ...+++.+++.++.||+.||+|||++ +++||||||+||+++.+ +.+||+|||.
T Consensus 97 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~ 170 (287)
T 2wei_A 97 YIVGELYTGGELFDEIIK---RKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGL 170 (287)
T ss_dssp EEEECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTG
T ss_pred EEEEEccCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCc
Confidence 999999999999998843 34689999999999999999999999 99999999999999764 4799999999
Q ss_pred cccccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCC
Q 039595 904 AKFVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLS 983 (1078)
Q Consensus 904 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 983 (1078)
+....... ......|++.|+|||.+.+ .++.++||||||+++|+|++|+.||..... ......+. .....
T Consensus 171 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~~~~------~~~~~ 240 (287)
T 2wei_A 171 STCFQQNT-KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE--YDILKRVE------TGKYA 240 (287)
T ss_dssp GGTBCCCS-SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHH------HCCCC
T ss_pred ceeecCCC-ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCH--HHHHHHHH------cCCCC
Confidence 98765432 2334568999999998876 489999999999999999999999753322 11111111 11111
Q ss_pred CCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 984 TPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 984 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
...+........+.+++.+||+.||++|||++|+++|+|+..
T Consensus 241 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~ 282 (287)
T 2wei_A 241 FDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQK 282 (287)
T ss_dssp CCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHH
T ss_pred CCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHhc
Confidence 111111112236788999999999999999999999999753
No 196
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=4.7e-38 Score=354.51 Aligned_cols=255 Identities=22% Similarity=0.370 Sum_probs=184.9
Q ss_pred hhcCCCccceeccCCceeEEEEEeCC-CC---EEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCC
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAELPS-GD---IVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNAR 824 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~~~-~~---~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 824 (1078)
..++|++.+.||+|+||+||+|.... ++ .||||++..... .....+.+.+|+.++++++||||+++++++....
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 98 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADII--ASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR 98 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC--------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEeccccc--CHHHHHHHHHHHHHHHHCCCCceehhhceeeccc
Confidence 35689999999999999999997653 32 799999876432 2344678999999999999999999999998766
Q ss_pred ee------EEEEeecCCCCHHHHhcCCC---CCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCc
Q 039595 825 HS------FLVCEYLHRGSLARILGNDA---TAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFE 895 (1078)
Q Consensus 825 ~~------~lv~E~~~~g~L~~~l~~~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~ 895 (1078)
.. ++||||+++|+|.+++.... ....+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 99 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~ 175 (323)
T 3qup_A 99 AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMT 175 (323)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSC
T ss_pred cccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCC
Confidence 55 99999999999999984322 223589999999999999999999999 9999999999999999999
Q ss_pred EEEecccccccccCCCC--CceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccchhhhhh
Q 039595 896 AHVSDFGIAKFVEPYSS--NRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSINFSSFSNMII 972 (1078)
Q Consensus 896 ~kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~~~~~~~~~~ 972 (1078)
+||+|||+++....... ......+++.|+|||.+.+..++.++|||||||++|||++ |+.||...... .....
T Consensus 176 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~~-- 251 (323)
T 3qup_A 176 VCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA--EIYNY-- 251 (323)
T ss_dssp EEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHH--
T ss_pred EEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH--HHHHH--
Confidence 99999999987644322 2234567889999999999999999999999999999999 99997643321 11111
Q ss_pred hhhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHH
Q 039595 973 EVNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFG 1019 (1078)
Q Consensus 973 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~ 1019 (1078)
+............. ..+.+++.+||+.||++|||+.++++
T Consensus 252 ----~~~~~~~~~~~~~~---~~l~~li~~~l~~dp~~Rps~~~l~~ 291 (323)
T 3qup_A 252 ----LIGGNRLKQPPECM---EEVYDLMYQCWSADPKQRPSFTCLRM 291 (323)
T ss_dssp ----HHTTCCCCCCTTCC---HHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred ----HhcCCCCCCCCccC---HHHHHHHHHHccCChhhCcCHHHHHH
Confidence 11111111111122 35788999999999999999555443
No 197
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.3e-37 Score=356.90 Aligned_cols=274 Identities=20% Similarity=0.250 Sum_probs=204.2
Q ss_pred HHHHHHhhcCCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccC-------ChhhHHHHHHHHHHHhcCCCCceee
Q 039595 743 HEEIIKATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSG-------NMADQDEFLNVVLALNEIRHRNIVK 815 (1078)
Q Consensus 743 ~~~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-------~~~~~~~~~~e~~~l~~l~h~niv~ 815 (1078)
.+++....++|++.+.||+|+||.||+|...+|+.||||++....... +....+.+.+|+.++++++||||++
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 93 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG 93 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence 456777889999999999999999999988889999999986543221 2223477899999999999999999
Q ss_pred EEeeee-----cCCeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeee
Q 039595 816 FHGFCS-----NARHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLL 890 (1078)
Q Consensus 816 l~~~~~-----~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll 890 (1078)
+++++. .....|+||||++ |+|.+++.. ....+++..+..++.||+.||+|||++ +|+||||||+||++
T Consensus 94 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~ 167 (362)
T 3pg1_A 94 LRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHD--QRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILL 167 (362)
T ss_dssp CSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHC--TTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEE
T ss_pred eeeeEEeccCCCcceEEEEEccCC-CCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEE
Confidence 999983 3446899999998 588888853 234689999999999999999999999 99999999999999
Q ss_pred CCCCcEEEecccccccccCCCCCceeecccccccccccccc-CCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhh
Q 039595 891 DLEFEAHVSDFGIAKFVEPYSSNRTEFVGTFGYAAPEIAYT-MRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSN 969 (1078)
Q Consensus 891 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~ 969 (1078)
+.++.+||+|||.++..... .......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||...... ....
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--~~~~ 244 (362)
T 3pg1_A 168 ADNNDITICDFNLAREDTAD-ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY--NQLN 244 (362)
T ss_dssp CTTCCEEECCTTC----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHH
T ss_pred cCCCCEEEEecCcccccccc-cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHH--HHHH
Confidence 99999999999999854432 23345678999999999887 67899999999999999999999997643211 1111
Q ss_pred hhh-----------------hhhhhcCCCCCCCCCccH-----HHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 970 MII-----------------EVNQILDPRLSTPSPGVM-----DKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 970 ~~~-----------------~~~~~~~~~~~~~~~~~~-----~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
.+. .................. .....+.+++.+||+.||++|||++|+++|||+..
T Consensus 245 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~ 322 (362)
T 3pg1_A 245 KIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFES 322 (362)
T ss_dssp HHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTT
T ss_pred HHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhh
Confidence 000 000111111111111111 11235789999999999999999999999999764
No 198
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=5.9e-38 Score=354.66 Aligned_cols=254 Identities=15% Similarity=0.143 Sum_probs=202.6
Q ss_pred hcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcC-CCCceeeEEeeeecCCeeE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEI-RHRNIVKFHGFCSNARHSF 827 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 827 (1078)
.++|++.+.||+|+||+||+|.. .+|+.||||++..... .+.+.+|+.+++++ +||||+++++++..+...+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~ 81 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR------APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNA 81 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS------SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc------hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccE
Confidence 46799999999999999999975 5789999999865421 23478899999999 9999999999999999999
Q ss_pred EEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCc-----EEEeccc
Q 039595 828 LVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFE-----AHVSDFG 902 (1078)
Q Consensus 828 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~-----~kl~DfG 902 (1078)
+||||+ +|+|.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++. +||+|||
T Consensus 82 lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg 155 (330)
T 2izr_A 82 MVLELL-GPSLEDLFDLC--DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFA 155 (330)
T ss_dssp EEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCT
T ss_pred EEEEeC-CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcc
Confidence 999999 89999999543 35699999999999999999999999 9999999999999999887 9999999
Q ss_pred ccccccCCCCC-------ceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccc-cchhhhhhhh
Q 039595 903 IAKFVEPYSSN-------RTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINF-SSFSNMIIEV 974 (1078)
Q Consensus 903 ~a~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~-~~~~~~~~~~ 974 (1078)
+++........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ......+...
T Consensus 156 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~ 235 (330)
T 2izr_A 156 LAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDT 235 (330)
T ss_dssp TCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHH
T ss_pred cceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhh
Confidence 99876443221 245689999999999999999999999999999999999999986543221 1111111111
Q ss_pred hhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHh
Q 039595 975 NQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHH 1021 (1078)
Q Consensus 975 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~ 1021 (1078)
........ ...... ++.+++.+||+.||.+||+++++.+..
T Consensus 236 ~~~~~~~~--~~~~~p----~~~~li~~~l~~~p~~RP~~~~l~~~l 276 (330)
T 2izr_A 236 KRATPIEV--LCENFP----EMATYLRYVRRLDFFEKPDYDYLRKLF 276 (330)
T ss_dssp HHHSCHHH--HTTTCH----HHHHHHHHHHHCCTTCCCCHHHHHHHH
T ss_pred hccCCHHH--HhccCh----HHHHHHHHHHhCCCCCCCCHHHHHHHH
Confidence 11111000 000111 678899999999999999999988743
No 199
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=5.1e-38 Score=343.88 Aligned_cols=254 Identities=24% Similarity=0.364 Sum_probs=205.8
Q ss_pred hcCCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFLV 829 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 829 (1078)
.++|++.+.||+|+||.||+|...+++.||+|++.... ...+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-----MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 81 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT-----BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC-----CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEE
Confidence 36789999999999999999988888899999997643 2346789999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccccccC
Q 039595 830 CEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVEP 909 (1078)
Q Consensus 830 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~~ 909 (1078)
|||+++|+|.+++... ...+++..++.++.|++.||+|||++ +++||||||+||+++.++.+||+|||.+.....
T Consensus 82 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 156 (267)
T 3t9t_A 82 TEFMEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 156 (267)
T ss_dssp ECCCTTCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred EeCCCCCcHHHHHhhC--cccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccc
Confidence 9999999999999543 34588999999999999999999999 999999999999999999999999999986543
Q ss_pred CC-CCceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccchhhhhhhhhhhcCCCCCCCCC
Q 039595 910 YS-SNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSP 987 (1078)
Q Consensus 910 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 987 (1078)
.. .......++..|+|||.+.+..++.++||||+|+++|||++ |+.||..... ...... ......+... .
T Consensus 157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~---i~~~~~~~~~---~ 228 (267)
T 3t9t_A 157 DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN--SEVVED---ISTGFRLYKP---R 228 (267)
T ss_dssp HHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHHH---HHTTCCCCCC---T
T ss_pred ccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH--HHHHHH---HhcCCcCCCC---c
Confidence 11 11223456788999999998899999999999999999999 8999753321 111111 1111111111 1
Q ss_pred ccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhh
Q 039595 988 GVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGY 1024 (1078)
Q Consensus 988 ~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~ 1024 (1078)
.. ...+.+++.+||+.||++|||++|++++....
T Consensus 229 ~~---~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l 262 (267)
T 3t9t_A 229 LA---STHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 262 (267)
T ss_dssp TS---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cC---cHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 11 23577899999999999999999999876543
No 200
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=2.6e-38 Score=361.78 Aligned_cols=261 Identities=21% Similarity=0.310 Sum_probs=187.7
Q ss_pred hcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecC-----
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNA----- 823 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----- 823 (1078)
.++|++.+.||+|+||.||+|.. .+|+.||||++.... ......+.+.+|+.+++.++||||+++++++...
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 105 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 105 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTT--SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGG
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccc--cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCcccc
Confidence 47899999999999999999964 578999999986542 2344567788999999999999999999998654
Q ss_pred -CeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccc
Q 039595 824 -RHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFG 902 (1078)
Q Consensus 824 -~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 902 (1078)
...|+|+||+ +++|.++++. ..+++.++..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||
T Consensus 106 ~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG 177 (367)
T 2fst_X 106 FNDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 177 (367)
T ss_dssp CCCCEEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC--
T ss_pred CCeEEEEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeecc
Confidence 5689999999 6799988843 4689999999999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCCceeecccccccccccccc-CCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhh-------
Q 039595 903 IAKFVEPYSSNRTEFVGTFGYAAPEIAYT-MRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEV------- 974 (1078)
Q Consensus 903 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~------- 974 (1078)
+++.... .....+||+.|+|||++.+ ..++.++||||+||++|||++|+.||...+.. .....+...
T Consensus 178 ~a~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~l~~i~~~~g~p~~~ 252 (367)
T 2fst_X 178 LARHTAD---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI--DQLKLILRLVGTPGAE 252 (367)
T ss_dssp ----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCSCCHH
T ss_pred ccccccc---cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCCHH
Confidence 9986543 2345689999999999887 67899999999999999999999997543221 111100000
Q ss_pred ----------hhhcCCCCCCCCCccH----HHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 975 ----------NQILDPRLSTPSPGVM----DKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 975 ----------~~~~~~~~~~~~~~~~----~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
...+......+..... .....+.+++.+||..||++|||++|+++|+|+..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~ 317 (367)
T 2fst_X 253 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317 (367)
T ss_dssp HHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred HHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhh
Confidence 0000000000000000 11235789999999999999999999999999764
No 201
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=9.4e-38 Score=353.65 Aligned_cols=257 Identities=22% Similarity=0.375 Sum_probs=205.4
Q ss_pred hhcCCCccceeccCCceeEEEEEeC--------CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcC-CCCceeeEEee
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAELP--------SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEI-RHRNIVKFHGF 819 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~ 819 (1078)
..++|++.+.||+|+||.||+|... ++..||||++.... .....+.+.+|+.+++++ +||||++++++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 109 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA---TEKDLSDLVSEMEMMKMIGKHKNIINLLGA 109 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC---cHHHHHHHHHHHHHHHHhhcCCCEeeEEEE
Confidence 3578999999999999999999753 46789999987542 344567789999999999 89999999999
Q ss_pred eecCCeeEEEEeecCCCCHHHHhcCCCC-------------CCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCC
Q 039595 820 CSNARHSFLVCEYLHRGSLARILGNDAT-------------AKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSK 886 (1078)
Q Consensus 820 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~ 886 (1078)
+.+.+..++||||+++|+|.+++..... ...+++.+++.++.||+.||+|||++ +|+||||||+
T Consensus 110 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~ 186 (334)
T 2pvf_A 110 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186 (334)
T ss_dssp ECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGG
T ss_pred EccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccc
Confidence 9999999999999999999999965432 23489999999999999999999999 9999999999
Q ss_pred CeeeCCCCcEEEecccccccccCCCC--CceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCccccc
Q 039595 887 NVLLDLEFEAHVSDFGIAKFVEPYSS--NRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSIN 963 (1078)
Q Consensus 887 NIll~~~~~~kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~ 963 (1078)
||+++.++.+||+|||+++....... ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||.....
T Consensus 187 NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~- 265 (334)
T 2pvf_A 187 NVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV- 265 (334)
T ss_dssp GEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH-
T ss_pred eEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH-
Confidence 99999999999999999987654322 1233456889999999998899999999999999999999 9999753321
Q ss_pred ccchhhhhhhhhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhh
Q 039595 964 FSSFSNMIIEVNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHI 1022 (1078)
Q Consensus 964 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~ 1022 (1078)
....... .....+... ... ...+.+++.+||+.||++|||++|++++.-
T Consensus 266 -~~~~~~~---~~~~~~~~~---~~~---~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 314 (334)
T 2pvf_A 266 -EELFKLL---KEGHRMDKP---ANC---TNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314 (334)
T ss_dssp -HHHHHHH---HHTCCCCCC---TTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -HHHHHHH---hcCCCCCCC---ccC---CHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1111111 111111111 111 135778899999999999999999998754
No 202
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.2e-37 Score=348.90 Aligned_cols=264 Identities=22% Similarity=0.317 Sum_probs=197.3
Q ss_pred hhcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeE
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSF 827 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 827 (1078)
..++|++.+.||+|+||.||+|.. .+|+.||||++..... ......+.+.+|+.++++++||||+++++++..++..+
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 108 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDL-MDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELN 108 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSS-CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhc-cCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEE
Confidence 346799999999999999999965 5799999999975432 23455677899999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhcCCC-CCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccc
Q 039595 828 LVCEYLHRGSLARILGNDA-TAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKF 906 (1078)
Q Consensus 828 lv~E~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~ 906 (1078)
+||||+++|+|.+++.... ....+++..++.++.|++.||+|||++ +++||||||+||+++.++.+||+|||++..
T Consensus 109 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~ 185 (310)
T 2wqm_A 109 IVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRF 185 (310)
T ss_dssp EEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC-----
T ss_pred EEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceee
Confidence 9999999999999985321 235589999999999999999999999 999999999999999999999999999987
Q ss_pred ccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCC
Q 039595 907 VEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPS 986 (1078)
Q Consensus 907 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 986 (1078)
............|++.|+|||.+.+..++.++||||||+++|||++|+.||............ .......+... .
T Consensus 186 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~--~ 260 (310)
T 2wqm_A 186 FSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCK---KIEQCDYPPLP--S 260 (310)
T ss_dssp -------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHH---HHHTTCSCCCC--T
T ss_pred ecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHH---HhhcccCCCCc--c
Confidence 655444445567999999999999999999999999999999999999997533222111111 11111111111 1
Q ss_pred CccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhh
Q 039595 987 PGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGY 1024 (1078)
Q Consensus 987 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~ 1024 (1078)
... ...+.+++.+||+.||++|||+++++++....
T Consensus 261 ~~~---~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l 295 (310)
T 2wqm_A 261 DHY---SEELRQLVNMCINPDPEKRPDVTYVYDVAKRM 295 (310)
T ss_dssp TTS---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ccc---CHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 111 22577889999999999999999999875433
No 203
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=9.2e-38 Score=344.60 Aligned_cols=257 Identities=23% Similarity=0.332 Sum_probs=193.8
Q ss_pred hhcCCCccceeccCCceeEEEEEeCC----CCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCC
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAELPS----GDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNAR 824 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 824 (1078)
..++|++.+.||+|+||.||+|.... +..||+|++.... .....+.+.+|+.++++++||||+++++++. ++
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~ 88 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT---SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-EN 88 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT---SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SS
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cC
Confidence 34689999999999999999997642 4579999986532 3445677899999999999999999999985 45
Q ss_pred eeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccc
Q 039595 825 HSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIA 904 (1078)
Q Consensus 825 ~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a 904 (1078)
..++||||+++|+|.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 163 (281)
T 1mp8_A 89 PVWIIMELCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLS 163 (281)
T ss_dssp SCEEEEECCTTEEHHHHHHHT--TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC----
T ss_pred ccEEEEecCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccc
Confidence 789999999999999999533 34589999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCC-CceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccchhhhhhhhhhhcCCCC
Q 039595 905 KFVEPYSS-NRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSINFSSFSNMIIEVNQILDPRL 982 (1078)
Q Consensus 905 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 982 (1078)
+....... ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...... .....+ .....+..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~--~~~~~i---~~~~~~~~ 238 (281)
T 1mp8_A 164 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRI---ENGERLPM 238 (281)
T ss_dssp ---------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHH---HTTCCCCC
T ss_pred cccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH--HHHHHH---HcCCCCCC
Confidence 87654322 2234456789999999998899999999999999999997 99997643221 111111 11111111
Q ss_pred CCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 983 STPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 983 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
.+... ..+.+++.+||+.||++|||++|++++.....
T Consensus 239 ---~~~~~---~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 275 (281)
T 1mp8_A 239 ---PPNCP---PTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 275 (281)
T ss_dssp ---CTTCC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---CCCCC---HHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 11122 35778899999999999999999998866443
No 204
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=4.7e-38 Score=354.83 Aligned_cols=255 Identities=21% Similarity=0.376 Sum_probs=196.4
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCE----EEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCC
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDI----VAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNAR 824 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 824 (1078)
.++|+..+.||+|+||+||+|.+. +++. ||+|.+.... .....+.+.+|+.++++++||||+++++++.++.
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 90 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNPHVCRLLGICLTST 90 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC----------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc---CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC
Confidence 367999999999999999999754 4554 5777775432 2344678999999999999999999999998765
Q ss_pred eeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccc
Q 039595 825 HSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIA 904 (1078)
Q Consensus 825 ~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a 904 (1078)
.++|+||+.+|+|.+++... ...+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 91 -~~~v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a 164 (327)
T 3poz_A 91 -VQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLA 164 (327)
T ss_dssp -EEEEEECCTTCBHHHHHHHS--TTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHH
T ss_pred -eEEEEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcce
Confidence 78999999999999999543 34689999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCCC--ceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccchhhhhhhhhhhcCCC
Q 039595 905 KFVEPYSSN--RTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSINFSSFSNMIIEVNQILDPR 981 (1078)
Q Consensus 905 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 981 (1078)
+........ .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||+..... ........ .. .
T Consensus 165 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~~~~---~~--~ 237 (327)
T 3poz_A 165 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILEK---GE--R 237 (327)
T ss_dssp HHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHHT---TC--C
T ss_pred eEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH--HHHHHHHc---CC--C
Confidence 876543322 234456889999999999999999999999999999999 99997643321 11111111 11 1
Q ss_pred CCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhh
Q 039595 982 LSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGY 1024 (1078)
Q Consensus 982 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~ 1024 (1078)
.. ..... ...+.+++.+||+.||++|||++|++++.-..
T Consensus 238 ~~-~~~~~---~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~ 276 (327)
T 3poz_A 238 LP-QPPIC---TIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276 (327)
T ss_dssp CC-CCTTB---CHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHH
T ss_pred CC-CCccC---CHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 11 11111 23577899999999999999999999886543
No 205
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=5.7e-38 Score=357.84 Aligned_cols=271 Identities=21% Similarity=0.295 Sum_probs=210.9
Q ss_pred hcCCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCCh-------------hhHHHHHHHHHHHhcCCCCceeeE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNM-------------ADQDEFLNVVLALNEIRHRNIVKF 816 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~-------------~~~~~~~~e~~~l~~l~h~niv~l 816 (1078)
.++|++.+.||+|+||.||+|.. +|+.||||++......... ...+.+.+|+.++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46899999999999999999987 8999999999764332111 112778999999999999999999
Q ss_pred EeeeecCCeeEEEEeecCCCCHHHH------hcCCCCCCcCCHHHHHHHHHHHHHHHHHHHh-cCCCCcEecCCCCCCee
Q 039595 817 HGFCSNARHSFLVCEYLHRGSLARI------LGNDATAKELSWNRRINVIKGVANALSYLHH-DCLPSIIHRDISSKNVL 889 (1078)
Q Consensus 817 ~~~~~~~~~~~lv~E~~~~g~L~~~------l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlk~~NIl 889 (1078)
++++.+.+..++||||+++|+|.++ +.. .....+++..++.++.|++.||+|||+ + +|+||||||+||+
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~-~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil 184 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDK-NYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNIL 184 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCS-SSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhh-ccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEE
Confidence 9999999999999999999999998 532 225679999999999999999999999 8 9999999999999
Q ss_pred eCCCCcEEEecccccccccCCCCCceeeccccccccccccccC-CCCc-cchhHHHHHHHHHHHhCCCCCCcccccccch
Q 039595 890 LDLEFEAHVSDFGIAKFVEPYSSNRTEFVGTFGYAAPEIAYTM-RATE-KYDVYSFGVLVFEVIKGNHPRDFFSINFSSF 967 (1078)
Q Consensus 890 l~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~sDvwSlG~il~elltG~~p~~~~~~~~~~~ 967 (1078)
++.++.+||+|||.+...... ......|++.|+|||.+.+. .++. ++|||||||++|||++|+.||...... ...
T Consensus 185 ~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~ 261 (348)
T 2pml_X 185 MDKNGRVKLSDFGESEYMVDK--KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL-VEL 261 (348)
T ss_dssp ECTTSCEEECCCTTCEECBTT--EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS-HHH
T ss_pred EcCCCcEEEeccccccccccc--cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH-HHH
Confidence 999999999999999876432 33456789999999999887 5666 999999999999999999997643321 111
Q ss_pred hhhhhhhhhhcCCCC---CCCC-C-----ccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhhhHH
Q 039595 968 SNMIIEVNQILDPRL---STPS-P-----GVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYCDEI 1028 (1078)
Q Consensus 968 ~~~~~~~~~~~~~~~---~~~~-~-----~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~~~~ 1028 (1078)
...+.......+... .... . ........+.+++.+||+.||++|||++|+++|+|+.....
T Consensus 262 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~~~ 331 (348)
T 2pml_X 262 FNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTNI 331 (348)
T ss_dssp HHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTCCH
T ss_pred HHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCCCH
Confidence 111111000000000 0000 0 00111236788999999999999999999999999876443
No 206
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=4.5e-38 Score=348.50 Aligned_cols=260 Identities=23% Similarity=0.390 Sum_probs=210.5
Q ss_pred HhhcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCee
Q 039595 748 KATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHS 826 (1078)
Q Consensus 748 ~~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 826 (1078)
...++|++.+.||+|+||+||+|..+ ++..||+|++... ....+.+.+|+.++++++||||+++++++.++...
T Consensus 10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 84 (288)
T 3kfa_A 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 84 (288)
T ss_dssp CCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-----STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSE
T ss_pred ccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-----HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCE
Confidence 35678999999999999999999765 5889999998643 23467789999999999999999999999999999
Q ss_pred EEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccc
Q 039595 827 FLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKF 906 (1078)
Q Consensus 827 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~ 906 (1078)
++||||+++|+|.+++... ....+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+..
T Consensus 85 ~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~ 160 (288)
T 3kfa_A 85 YIITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL 160 (288)
T ss_dssp EEEEECCTTEEHHHHHHHC-CTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGT
T ss_pred EEEEEcCCCCcHHHHHHhc-ccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCcccee
Confidence 9999999999999999543 345689999999999999999999999 999999999999999999999999999987
Q ss_pred ccCCCC-CceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccchhhhhhhhhhhcCCCCCC
Q 039595 907 VEPYSS-NRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSINFSSFSNMIIEVNQILDPRLST 984 (1078)
Q Consensus 907 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 984 (1078)
...... ......+|+.|+|||.+.+..++.++||||+|+++|+|++ |..||...... ..... ..........
T Consensus 161 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~--~~~~~---~~~~~~~~~~- 234 (288)
T 3kfa_A 161 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYEL---LEKDYRMERP- 234 (288)
T ss_dssp SCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHH---HHTTCCCCCC-
T ss_pred ccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHH---HhccCCCCCC-
Confidence 654322 2234567889999999999999999999999999999999 99997543321 11111 1111111111
Q ss_pred CCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhhhH
Q 039595 985 PSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYCDE 1027 (1078)
Q Consensus 985 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~~~ 1027 (1078)
.... ..+.+++.+||+.||++|||++|+++.......+
T Consensus 235 --~~~~---~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 235 --EGCP---EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp --TTCC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --CCCC---HHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 1111 3577899999999999999999999876544433
No 207
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=5e-38 Score=354.41 Aligned_cols=255 Identities=23% Similarity=0.356 Sum_probs=198.2
Q ss_pred cCCCccceeccCCceeEEEEEeC-CCCE----EEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCe
Q 039595 751 DDFDEKFCIGKGGQGSVYKAELP-SGDI----VAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARH 825 (1078)
Q Consensus 751 ~~~~~~~~lG~G~~g~V~~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 825 (1078)
++|++.+.||+|+||+||+|.+. +++. ||+|++.... .......+.+|+.++++++||||+++++++. +..
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~ 88 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS---GRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSS 88 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT---SCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSS
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc---cHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCc
Confidence 57899999999999999999754 4554 7778775432 1222345678999999999999999999987 456
Q ss_pred eEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccc
Q 039595 826 SFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAK 905 (1078)
Q Consensus 826 ~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~ 905 (1078)
.++||||+.+|+|.+++... ...+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 89 ~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 163 (325)
T 3kex_A 89 LQLVTQYLPLGSLLDHVRQH--RGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVAD 163 (325)
T ss_dssp EEEEEECCTTCBSHHHHHSS--GGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGG
T ss_pred cEEEEEeCCCCCHHHHHHHc--cccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCccc
Confidence 88999999999999999543 35688999999999999999999999 99999999999999999999999999999
Q ss_pred cccCCCC--CceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccchhhhhhhhhhhcCCCC
Q 039595 906 FVEPYSS--NRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSINFSSFSNMIIEVNQILDPRL 982 (1078)
Q Consensus 906 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 982 (1078)
....... ......||..|+|||.+.+..++.++|||||||++|||++ |+.||..... ............ ...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~~~~~---~~~ 238 (325)
T 3kex_A 164 LLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL--AEVPDLLEKGER---LAQ 238 (325)
T ss_dssp GSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCT--THHHHHHHTTCB---CCC
T ss_pred ccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCH--HHHHHHHHcCCC---CCC
Confidence 7754332 2345678889999999999999999999999999999999 9999764322 112111111111 111
Q ss_pred CCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 983 STPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 983 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
... .. ..+.+++.+||+.||++|||++|++++.....
T Consensus 239 ~~~---~~---~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~ 275 (325)
T 3kex_A 239 PQI---CT---IDVYMVMVKCWMIDENIRPTFKELANEFTRMA 275 (325)
T ss_dssp CTT---BC---TTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHT
T ss_pred CCc---Cc---HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 111 11 14668889999999999999999999975443
No 208
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=9.1e-38 Score=350.44 Aligned_cols=259 Identities=22% Similarity=0.336 Sum_probs=203.3
Q ss_pred hhcCCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCC--CCceeeEEeeeecCCee
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIR--HRNIVKFHGFCSNARHS 826 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~ 826 (1078)
..++|++.+.||+|+||.||+|..++++.||||++..... .....+.+.+|+.++++++ ||||+++++++..+...
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~ 103 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI 103 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEE
T ss_pred ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccc--cccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEE
Confidence 4568999999999999999999888899999999975432 3445678899999999997 59999999999999999
Q ss_pred EEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccc
Q 039595 827 FLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKF 906 (1078)
Q Consensus 827 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~ 906 (1078)
++||| +.+++|.+++.. ...+++.+++.++.|++.||+|||++ +|+||||||+||+++ ++.+||+|||+++.
T Consensus 104 ~lv~e-~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~ 175 (313)
T 3cek_A 104 YMVME-CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQ 175 (313)
T ss_dssp EEEEC-CCSEEHHHHHHH---CSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCC
T ss_pred EEEEe-cCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEE-CCeEEEeecccccc
Confidence 99999 567899999954 34689999999999999999999999 999999999999996 58999999999987
Q ss_pred ccCCCC--Cceeecccccccccccccc-----------CCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhh
Q 039595 907 VEPYSS--NRTEFVGTFGYAAPEIAYT-----------MRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIE 973 (1078)
Q Consensus 907 ~~~~~~--~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~ 973 (1078)
...... ......|++.|+|||.+.+ ..++.++||||||+++|||++|+.||....... ..
T Consensus 176 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-------~~ 248 (313)
T 3cek_A 176 MQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI-------SK 248 (313)
T ss_dssp --------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH-------HH
T ss_pred ccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHH-------HH
Confidence 644322 2234578999999999875 468889999999999999999999975332211 11
Q ss_pred hhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhhh
Q 039595 974 VNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYCD 1026 (1078)
Q Consensus 974 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~~ 1026 (1078)
.....++......+... ...+.+++.+||+.||++|||++|+++|+|+...
T Consensus 249 ~~~~~~~~~~~~~~~~~--~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~ 299 (313)
T 3cek_A 249 LHAIIDPNHEIEFPDIP--EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ 299 (313)
T ss_dssp HHHHHCTTSCCCCCCCS--CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC
T ss_pred HHHHHhcccccCCcccc--hHHHHHHHHHHccCCcccCcCHHHHhcCccccCC
Confidence 22222322222211111 1257788999999999999999999999998754
No 209
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.5e-37 Score=346.91 Aligned_cols=262 Identities=24% Similarity=0.345 Sum_probs=198.7
Q ss_pred hhcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeec-----
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSN----- 822 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----- 822 (1078)
..++|++.+.||+|+||.||+|.. .+++.||||++... ....+.+.+|+.++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 78 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-----EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFV 78 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCC
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-----HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchh
Confidence 346799999999999999999976 47999999998542 3346778999999999999999999998754
Q ss_pred --------CCeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCC
Q 039595 823 --------ARHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEF 894 (1078)
Q Consensus 823 --------~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~ 894 (1078)
....++||||+++|+|.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 79 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~ 153 (303)
T 1zy4_A 79 KPMTAVKKKSTLFIQMEYCENGTLYDLIHSE--NLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESR 153 (303)
T ss_dssp C------CEEEEEEEEECCCSCBHHHHHHHS--CGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTS
T ss_pred hhhcccccCCceEEEEecCCCCCHHHhhhcc--ccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCC
Confidence 45789999999999999999542 34578899999999999999999999 999999999999999999
Q ss_pred cEEEecccccccccCCC--------------CCceeeccccccccccccccC-CCCccchhHHHHHHHHHHHhCCCCCCc
Q 039595 895 EAHVSDFGIAKFVEPYS--------------SNRTEFVGTFGYAAPEIAYTM-RATEKYDVYSFGVLVFEVIKGNHPRDF 959 (1078)
Q Consensus 895 ~~kl~DfG~a~~~~~~~--------------~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltG~~p~~~ 959 (1078)
.+||+|||.+....... .......||+.|+|||++.+. .++.++||||+||++|||++ ||..
T Consensus 154 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~ 230 (303)
T 1zy4_A 154 NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFST 230 (303)
T ss_dssp CEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSS
T ss_pred CEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCC
Confidence 99999999998664321 122345789999999998864 68999999999999999998 4321
Q ss_pred ccccccchhhhhhhhhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhhhHHHH
Q 039595 960 FSINFSSFSNMIIEVNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYCDEILA 1030 (1078)
Q Consensus 960 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~~~~~~ 1030 (1078)
... .......... ....++.... ......+.+++.+||+.||++|||++|+++|+|+.......
T Consensus 231 ~~~-~~~~~~~~~~----~~~~~~~~~~--~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~~~ 294 (303)
T 1zy4_A 231 GME-RVNILKKLRS----VSIEFPPDFD--DNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQDE 294 (303)
T ss_dssp HHH-HHHHHHHHHS----TTCCCCTTCC--TTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCCCCHHH
T ss_pred chh-HHHHHHhccc----cccccCcccc--ccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCCCChHH
Confidence 111 0111111111 1111111111 11223567899999999999999999999999987654443
No 210
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=6.7e-38 Score=352.09 Aligned_cols=266 Identities=23% Similarity=0.339 Sum_probs=209.4
Q ss_pred HHHHHHhhcCCCccceeccCCceeEEEEEe------CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcC-CCCceee
Q 039595 743 HEEIIKATDDFDEKFCIGKGGQGSVYKAEL------PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEI-RHRNIVK 815 (1078)
Q Consensus 743 ~~~~~~~~~~~~~~~~lG~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~ 815 (1078)
..+.....++|++.+.||+|+||+||+|.. .+++.||||++.... .....+.+.+|+.+++++ +||||++
T Consensus 19 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~ 95 (316)
T 2xir_A 19 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHLNVVN 95 (316)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred ccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC---CcHHHHHHHHHHHHHHhcccCCCeee
Confidence 344555678999999999999999999963 356789999997542 334456789999999999 7999999
Q ss_pred EEeeeecC-CeeEEEEeecCCCCHHHHhcCCCC-------------CCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEec
Q 039595 816 FHGFCSNA-RHSFLVCEYLHRGSLARILGNDAT-------------AKELSWNRRINVIKGVANALSYLHHDCLPSIIHR 881 (1078)
Q Consensus 816 l~~~~~~~-~~~~lv~E~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~ 881 (1078)
+++++... ...++||||+++|+|.+++..... ...+++.+++.++.|++.||+|||++ +|+||
T Consensus 96 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~ 172 (316)
T 2xir_A 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHR 172 (316)
T ss_dssp EEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred EEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Ccccc
Confidence 99998765 458999999999999999965432 12378999999999999999999999 99999
Q ss_pred CCCCCCeeeCCCCcEEEecccccccccCCCCC--ceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCC
Q 039595 882 DISSKNVLLDLEFEAHVSDFGIAKFVEPYSSN--RTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRD 958 (1078)
Q Consensus 882 Dlk~~NIll~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~ 958 (1078)
||||+||+++.++.+||+|||+++........ .....||+.|+|||++.+..++.++|||||||++|||++ |+.||.
T Consensus 173 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~ 252 (316)
T 2xir_A 173 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 252 (316)
T ss_dssp CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred cCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCc
Confidence 99999999999999999999999876543322 234567899999999999999999999999999999998 999975
Q ss_pred cccccccchhhhhhhhhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhh
Q 039595 959 FFSINFSSFSNMIIEVNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGY 1024 (1078)
Q Consensus 959 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~ 1024 (1078)
...... ...... ......... ... ...+.+++.+||+.||++|||++|+++|....
T Consensus 253 ~~~~~~-~~~~~~---~~~~~~~~~---~~~---~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 308 (316)
T 2xir_A 253 GVKIDE-EFCRRL---KEGTRMRAP---DYT---TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308 (316)
T ss_dssp TCCCSH-HHHHHH---HHTCCCCCC---TTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ccchhH-HHHHHh---ccCccCCCC---CCC---CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 433221 111111 111111111 111 12577889999999999999999999986543
No 211
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=5.7e-38 Score=363.05 Aligned_cols=263 Identities=21% Similarity=0.245 Sum_probs=197.8
Q ss_pred hcCCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCC-----
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNAR----- 824 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 824 (1078)
..+|+..+.||+|+||+||+|+...+..||+|++...... ..+|+.+++.++||||+++++++...+
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~--------~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~ 110 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF--------KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDE 110 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS--------CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSC
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch--------HHHHHHHHHhCCCCCcceEEEEEEecCCCCCc
Confidence 3579999999999999999998877777999998653211 236899999999999999999984433
Q ss_pred -eeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeC-CCCcEEEeccc
Q 039595 825 -HSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLD-LEFEAHVSDFG 902 (1078)
Q Consensus 825 -~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~-~~~~~kl~DfG 902 (1078)
..++||||++++.+............+++..++.++.||+.||+|||++ +|+||||||+||+++ .++.+||+|||
T Consensus 111 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG 187 (394)
T 4e7w_A 111 VFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFG 187 (394)
T ss_dssp EEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred eEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCC
Confidence 3789999998854443332222345689999999999999999999999 999999999999999 79999999999
Q ss_pred ccccccCCCCCceeeccccccccccccccC-CCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhh---------
Q 039595 903 IAKFVEPYSSNRTEFVGTFGYAAPEIAYTM-RATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMII--------- 972 (1078)
Q Consensus 903 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~--------- 972 (1078)
+|+..... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||...... ........
T Consensus 188 ~a~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~p~~~~ 265 (394)
T 4e7w_A 188 SAKILIAG-EPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI-DQLVEIIKVLGTPSREQ 265 (394)
T ss_dssp TCEECCTT-CCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHH
T ss_pred CcccccCC-CCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHH
Confidence 99876442 233456789999999998765 5899999999999999999999997643321 00100000
Q ss_pred --h-hhhhcCCCCCCCCCccHH------HHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 973 --E-VNQILDPRLSTPSPGVMD------KLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 973 --~-~~~~~~~~~~~~~~~~~~------~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
. ........+....+.... ...++.+++.+||+.||++|||++|+++|+|+..
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~ 327 (394)
T 4e7w_A 266 IKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDE 327 (394)
T ss_dssp HHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGST
T ss_pred HHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhh
Confidence 0 001111111111110000 1236889999999999999999999999999764
No 212
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.2e-37 Score=366.62 Aligned_cols=247 Identities=25% Similarity=0.387 Sum_probs=198.9
Q ss_pred hcCCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCC-eeEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNAR-HSFL 828 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~l 828 (1078)
.++|++.+.||+|+||.||+|.++ |+.||||+++... ..+.|.+|+.++++++||||+++++++.+.. ..++
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~i 264 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 264 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT------TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch------HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEE
Confidence 467889999999999999999876 7899999987542 3567899999999999999999999986654 7899
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVE 908 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~ 908 (1078)
||||+++|+|.++++.. ....+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 265 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 340 (450)
T 1k9a_A 265 VTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 340 (450)
T ss_dssp EEECCTTCBHHHHHHHH-CTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEecCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccc
Confidence 99999999999999543 223478999999999999999999999 99999999999999999999999999998543
Q ss_pred CCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccchhhhhhhhhhhcCCCCCCCCC
Q 039595 909 PYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSP 987 (1078)
Q Consensus 909 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 987 (1078)
.. .....+++.|+|||++.+..++.++|||||||++|||++ |+.||..... ......+. .......+ .
T Consensus 341 ~~---~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~--~~~~~~i~---~~~~~~~p---~ 409 (450)
T 1k9a_A 341 ST---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KDVVPRVE---KGYKMDAP---D 409 (450)
T ss_dssp ---------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCT--TTHHHHHH---TTCCCCCC---T
T ss_pred cc---ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHH---cCCCCCCC---C
Confidence 22 223367889999999999999999999999999999998 9999764332 11111111 11111111 1
Q ss_pred ccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHh
Q 039595 988 GVMDKLISIMEVAILCLDESPEARPTMEKGFGHH 1021 (1078)
Q Consensus 988 ~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~ 1021 (1078)
... ..+.+++.+||+.||++|||++++++..
T Consensus 410 ~~~---~~l~~li~~cl~~dp~~Rpt~~~l~~~L 440 (450)
T 1k9a_A 410 GCP---PAVYDVMKNCWHLDAATRPTFLQLREQL 440 (450)
T ss_dssp TCC---HHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred cCC---HHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 122 2577889999999999999999998754
No 213
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.4e-37 Score=344.64 Aligned_cols=259 Identities=26% Similarity=0.415 Sum_probs=193.7
Q ss_pred hhcCCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
..++|++.+.||+|+||+||+|... ..||||+++... ......+.+.+|+.++++++||||+++++++. ....++
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~l 96 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTA--PTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAI 96 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSS--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEE
T ss_pred CccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccC--CCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc-CCccEE
Confidence 3568999999999999999999864 469999987543 23455678999999999999999999999764 566899
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVE 908 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~ 908 (1078)
||||+++++|.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 97 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 171 (289)
T 3og7_A 97 VTQWCEGSSLYHHLHAS--ETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKS 171 (289)
T ss_dssp EEECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC------
T ss_pred EEEecCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccc
Confidence 99999999999999533 35689999999999999999999999 99999999999999999999999999998654
Q ss_pred CCC--CCceeeccccccccccccc---cCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCC
Q 039595 909 PYS--SNRTEFVGTFGYAAPEIAY---TMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLS 983 (1078)
Q Consensus 909 ~~~--~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 983 (1078)
... .......||+.|+|||.+. +..++.++||||+|+++|||++|+.||...... ........ .....+...
T Consensus 172 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-~~~~~~~~--~~~~~~~~~ 248 (289)
T 3og7_A 172 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR-DQIIEMVG--RGSLSPDLS 248 (289)
T ss_dssp ------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH-HHHHHHHH--HTSCCCCTT
T ss_pred cccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchH-HHHHHHhc--ccccCcchh
Confidence 322 2234567999999999986 567889999999999999999999997643321 11111111 111222222
Q ss_pred CCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhh
Q 039595 984 TPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIG 1023 (1078)
Q Consensus 984 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~ 1023 (1078)
...... ...+.+++.+||+.||++|||++|+++..-.
T Consensus 249 ~~~~~~---~~~l~~li~~~l~~~p~~Rps~~ell~~L~~ 285 (289)
T 3og7_A 249 KVRSNC---PKRMKRLMAECLKKKRDERPSFPRILAEIEE 285 (289)
T ss_dssp SSCTTS---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred hccccC---CHHHHHHHHHHccCChhhCCCHHHHHHHHHH
Confidence 211222 2367889999999999999999999987543
No 214
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.2e-37 Score=341.42 Aligned_cols=255 Identities=24% Similarity=0.313 Sum_probs=203.8
Q ss_pred cCCCccc-eeccCCceeEEEEEeC---CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCee
Q 039595 751 DDFDEKF-CIGKGGQGSVYKAELP---SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHS 826 (1078)
Q Consensus 751 ~~~~~~~-~lG~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 826 (1078)
++|.+.. .||+|+||.||+|.+. ++..||||+++... .....+.+.+|+.++++++||||+++++++. .+..
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~ 84 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT---EKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEAL 84 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc---chhHHHHHHHHHHHHHhCCCCCEeEEEEEec-CCCc
Confidence 4566665 8999999999999753 57789999997642 3455678999999999999999999999994 5568
Q ss_pred EEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccc
Q 039595 827 FLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKF 906 (1078)
Q Consensus 827 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~ 906 (1078)
++||||+++|+|.+++.. ....+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.++.
T Consensus 85 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~ 159 (287)
T 1u59_A 85 MLVMEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKA 159 (287)
T ss_dssp EEEEECCTTEEHHHHHTT--CTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEEeCCCCCHHHHHHh--CCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceee
Confidence 999999999999999953 235689999999999999999999999 999999999999999999999999999987
Q ss_pred ccCCCCC---ceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccchhhhhhhhhhhcCCCC
Q 039595 907 VEPYSSN---RTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSINFSSFSNMIIEVNQILDPRL 982 (1078)
Q Consensus 907 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 982 (1078)
....... .....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||..... ......+ .....+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~~i---~~~~~~~~ 234 (287)
T 1u59_A 160 LGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--PEVMAFI---EQGKRMEC 234 (287)
T ss_dssp CTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT--HHHHHHH---HTTCCCCC
T ss_pred eccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH--HHHHHHH---hcCCcCCC
Confidence 6543221 223456889999999998889999999999999999998 9999754332 1111111 11111111
Q ss_pred CCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 983 STPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 983 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
. .... ..+.+++.+||+.||++||+++|++++++...
T Consensus 235 ~---~~~~---~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 271 (287)
T 1u59_A 235 P---PECP---PELYALMSDCWIYKWEDRPDFLTVEQRMRACY 271 (287)
T ss_dssp C---TTCC---HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred C---CCcC---HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1 1112 36778899999999999999999999987443
No 215
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=4e-38 Score=366.43 Aligned_cols=265 Identities=18% Similarity=0.267 Sum_probs=186.0
Q ss_pred cCCCc-cceeccCCceeEEEEEeC---CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeee--ecCC
Q 039595 751 DDFDE-KFCIGKGGQGSVYKAELP---SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFC--SNAR 824 (1078)
Q Consensus 751 ~~~~~-~~~lG~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~--~~~~ 824 (1078)
+.|++ .++||+|+||+||+|..+ +++.||||++.... ....+.+|+.++++++||||+++++++ ..+.
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~------~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 93 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG------ISMSACREIALLRELKHPNVISLQKVFLSHADR 93 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS------CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTT
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC------CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCC
Confidence 45665 457999999999999765 57899999986542 134578899999999999999999999 4577
Q ss_pred eeEEEEeecCCCCHHHHhcCC------CCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeee----CCCC
Q 039595 825 HSFLVCEYLHRGSLARILGND------ATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLL----DLEF 894 (1078)
Q Consensus 825 ~~~lv~E~~~~g~L~~~l~~~------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll----~~~~ 894 (1078)
..|+||||+.+ +|.+++... .....+++..++.++.||+.||+|||++ +|+||||||+|||+ +.++
T Consensus 94 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~ 169 (405)
T 3rgf_A 94 KVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERG 169 (405)
T ss_dssp EEEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTT
T ss_pred eEEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCC
Confidence 89999999975 888877421 1223589999999999999999999999 99999999999999 6779
Q ss_pred cEEEecccccccccCCC---CCceeeccccccccccccccC-CCCccchhHHHHHHHHHHHhCCCCCCcccccccc----
Q 039595 895 EAHVSDFGIAKFVEPYS---SNRTEFVGTFGYAAPEIAYTM-RATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSS---- 966 (1078)
Q Consensus 895 ~~kl~DfG~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~---- 966 (1078)
.+||+|||+++...... ......+||+.|+|||++.+. .++.++||||+||++|||++|+.||.....+...
T Consensus 170 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~ 249 (405)
T 3rgf_A 170 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPY 249 (405)
T ss_dssp CEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCC
T ss_pred cEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccc
Confidence 99999999998765422 223456899999999998874 5899999999999999999999998543321100
Q ss_pred hhhhhhhhhhhcCCCCCCCC-----------------------CccHH--------HHHHHHHHHHhcccCCCCCCCChh
Q 039595 967 FSNMIIEVNQILDPRLSTPS-----------------------PGVMD--------KLISIMEVAILCLDESPEARPTME 1015 (1078)
Q Consensus 967 ~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~--------~~~~l~~li~~cl~~dP~~RPt~~ 1015 (1078)
...........+........ ..... ....+.+++.+||..||++|||++
T Consensus 250 ~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~ 329 (405)
T 3rgf_A 250 HHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSE 329 (405)
T ss_dssp CHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHH
T ss_pred hHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHH
Confidence 00000000000000000000 00000 012577899999999999999999
Q ss_pred HHHHHhhhhh
Q 039595 1016 KGFGHHIGYC 1025 (1078)
Q Consensus 1016 ell~h~~~~~ 1025 (1078)
|+++|+|+..
T Consensus 330 e~L~hp~f~~ 339 (405)
T 3rgf_A 330 QAMQDPYFLE 339 (405)
T ss_dssp HHHTSGGGTS
T ss_pred HHhcChhhcc
Confidence 9999999864
No 216
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=6.7e-38 Score=373.08 Aligned_cols=253 Identities=23% Similarity=0.403 Sum_probs=205.1
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
.++|++.+.||+|+||.||+|.++ ++..||||+++... ...+.|.+|+.++++++||||+++++++.+....++
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 293 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 293 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-----SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-----cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEE
Confidence 467889999999999999999776 48899999986542 246789999999999999999999999999999999
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVE 908 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~ 908 (1078)
||||+++|+|.++++.. ....+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 294 v~E~~~~g~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 369 (495)
T 1opk_A 294 ITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMT 369 (495)
T ss_dssp EEECCTTCBHHHHHHHS-CTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCT
T ss_pred EEEccCCCCHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceecc
Confidence 99999999999999543 235689999999999999999999999 99999999999999999999999999998764
Q ss_pred CCC-CCceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccchhhhhhhhhhhcCCCCCCCC
Q 039595 909 PYS-SNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPS 986 (1078)
Q Consensus 909 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 986 (1078)
... .......+++.|+|||++.+..++.++|||||||++|||++ |+.||..... ......+ ........ .
T Consensus 370 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~--~~~~~~~---~~~~~~~~---~ 441 (495)
T 1opk_A 370 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQVYELL---EKDYRMER---P 441 (495)
T ss_dssp TCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GGHHHHH---HTTCCCCC---C
T ss_pred CCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCH--HHHHHHH---HcCCCCCC---C
Confidence 322 11223456789999999999899999999999999999999 9999754332 1111111 11111111 1
Q ss_pred CccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhh
Q 039595 987 PGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHI 1022 (1078)
Q Consensus 987 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~ 1022 (1078)
.... ..+.+++.+||+.||++|||++++++..-
T Consensus 442 ~~~~---~~l~~li~~cl~~dP~~RPs~~el~~~L~ 474 (495)
T 1opk_A 442 EGCP---EKVYELMRACWQWNPSDRPSFAEIHQAFE 474 (495)
T ss_dssp TTCC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCC---HHHHHHHHHHcCcChhHCcCHHHHHHHHH
Confidence 1112 25778899999999999999999988754
No 217
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.5e-37 Score=358.78 Aligned_cols=265 Identities=20% Similarity=0.225 Sum_probs=198.2
Q ss_pred HHhhcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeec---
Q 039595 747 IKATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSN--- 822 (1078)
Q Consensus 747 ~~~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--- 822 (1078)
....++|++.+.||+|+||+||+|.. .+|+.||||++..... ...+|+.+++.++||||+++++++..
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~--------~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 74 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR--------YKNRELDIMKVLDHVNIIKLVDYFYTTGD 74 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT--------SCCHHHHHHTTCCCTTBCCEEEEEEEC--
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc--------hHHHHHHHHHHcCCCCccchhheeeecCc
Confidence 34567899999999999999999965 5799999999865421 12368999999999999999999843
Q ss_pred -----------------------------------CCeeEEEEeecCCCCHHHHhcCC-CCCCcCCHHHHHHHHHHHHHH
Q 039595 823 -----------------------------------ARHSFLVCEYLHRGSLARILGND-ATAKELSWNRRINVIKGVANA 866 (1078)
Q Consensus 823 -----------------------------------~~~~~lv~E~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~ 866 (1078)
....++||||+++ +|.+.+... .....+++..+..++.||+.|
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~a 153 (383)
T 3eb0_A 75 EEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRA 153 (383)
T ss_dssp -----------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 3348899999985 877776421 234568999999999999999
Q ss_pred HHHHHhcCCCCcEecCCCCCCeeeC-CCCcEEEecccccccccCCCCCceeeccccccccccccccC-CCCccchhHHHH
Q 039595 867 LSYLHHDCLPSIIHRDISSKNVLLD-LEFEAHVSDFGIAKFVEPYSSNRTEFVGTFGYAAPEIAYTM-RATEKYDVYSFG 944 (1078)
Q Consensus 867 L~~LH~~~~~~ivH~Dlk~~NIll~-~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG 944 (1078)
|+|||++ ||+||||||+||+++ .++.+||+|||.|+..... .......||+.|+|||.+.+. .++.++||||+|
T Consensus 154 L~~LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG 229 (383)
T 3eb0_A 154 VGFIHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPS-EPSVAYICSRFYRAPELMLGATEYTPSIDLWSIG 229 (383)
T ss_dssp HHHHHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTT-SCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHH
T ss_pred HHHHHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCC-CCCcCcccCCCccCHHHhcCCCCCCcchhhhhHH
Confidence 9999999 999999999999997 6899999999999876443 233456789999999998875 489999999999
Q ss_pred HHHHHHHhCCCCCCcccccccchhhhhhhh-------hhhcCCC-----CCCCCCccH------HHHHHHHHHHHhcccC
Q 039595 945 VLVFEVIKGNHPRDFFSINFSSFSNMIIEV-------NQILDPR-----LSTPSPGVM------DKLISIMEVAILCLDE 1006 (1078)
Q Consensus 945 ~il~elltG~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~-----~~~~~~~~~------~~~~~l~~li~~cl~~ 1006 (1078)
|++|||++|+.||...... ......+... ....++. +........ .....+.+++.+||+.
T Consensus 230 ~il~ell~g~~pf~~~~~~-~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 308 (383)
T 3eb0_A 230 CVFGELILGKPLFSGETSI-DQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRY 308 (383)
T ss_dssp HHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCS
T ss_pred HHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccC
Confidence 9999999999997643221 1111110000 0000111 100000000 0123578999999999
Q ss_pred CCCCCCChhHHHHHhhhhh
Q 039595 1007 SPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 1007 dP~~RPt~~ell~h~~~~~ 1025 (1078)
||++|||++|+++|+|+..
T Consensus 309 dP~~R~t~~e~l~hp~f~~ 327 (383)
T 3eb0_A 309 EPDLRINPYEAMAHPFFDH 327 (383)
T ss_dssp SGGGSCCHHHHHTSGGGHH
T ss_pred ChhhCCCHHHHhcCHHHHH
Confidence 9999999999999999764
No 218
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.8e-37 Score=348.47 Aligned_cols=262 Identities=24% Similarity=0.344 Sum_probs=197.0
Q ss_pred HHhhcCCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhc--CCCCceeeEEeeeecC-
Q 039595 747 IKATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNE--IRHRNIVKFHGFCSNA- 823 (1078)
Q Consensus 747 ~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~- 823 (1078)
....++|++.+.||+|+||.||+|+.. ++.||||++... ....+..|.+++.. ++||||+++++++...
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~ 104 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT-------EEASWFRETEIYQTVLMRHENILGFIAADIKGT 104 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG-------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc-------ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCC
Confidence 344578999999999999999999876 899999998543 13334445555544 4999999999999776
Q ss_pred ---CeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcC-----CCCcEecCCCCCCeeeCCCCc
Q 039595 824 ---RHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDC-----LPSIIHRDISSKNVLLDLEFE 895 (1078)
Q Consensus 824 ---~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-----~~~ivH~Dlk~~NIll~~~~~ 895 (1078)
...++||||+++|+|.++++. ..+++.+++.++.|++.||+|||++. .++|+||||||+||+++.++.
T Consensus 105 ~~~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~ 180 (337)
T 3mdy_A 105 GSWTQLYLITDYHENGSLYDYLKS----TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGT 180 (337)
T ss_dssp GGGCEEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSC
T ss_pred CCCCceEEEEeccCCCcHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCC
Confidence 789999999999999999943 35899999999999999999999752 238999999999999999999
Q ss_pred EEEecccccccccCCCCC----ceeeccccccccccccccCCCCcc------chhHHHHHHHHHHHhC----------CC
Q 039595 896 AHVSDFGIAKFVEPYSSN----RTEFVGTFGYAAPEIAYTMRATEK------YDVYSFGVLVFEVIKG----------NH 955 (1078)
Q Consensus 896 ~kl~DfG~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~------sDvwSlG~il~elltG----------~~ 955 (1078)
+||+|||+++........ .....||+.|+|||++.+..++.+ +|||||||++|||++| +.
T Consensus 181 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~ 260 (337)
T 3mdy_A 181 CCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQL 260 (337)
T ss_dssp EEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccc
Confidence 999999999866443222 124579999999999988776665 9999999999999999 55
Q ss_pred CCCcccccccchhhhhhhhhhhcCCCCCCCCCc---cHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhh
Q 039595 956 PRDFFSINFSSFSNMIIEVNQILDPRLSTPSPG---VMDKLISIMEVAILCLDESPEARPTMEKGFGHHIG 1023 (1078)
Q Consensus 956 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~ 1023 (1078)
||............. .. ...........+. .......+.+++.+||+.||++|||++|++++.-.
T Consensus 261 p~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 328 (337)
T 3mdy_A 261 PYHDLVPSDPSYEDM-RE--IVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAK 328 (337)
T ss_dssp TTTTTSCSSCCHHHH-HH--HHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred cHhhhcCCCCchhhh-HH--HHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHH
Confidence 543322211111111 11 1111111111111 12445578899999999999999999999988653
No 219
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.4e-37 Score=361.56 Aligned_cols=263 Identities=21% Similarity=0.250 Sum_probs=203.4
Q ss_pred hcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCC--------CCceeeEEeee
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIR--------HRNIVKFHGFC 820 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~l~~~~ 820 (1078)
.++|++.+.||+|+||+||+|.. .+++.||||++... ....+.+.+|+.++++++ ||||+++++++
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~ 110 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-----EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDF 110 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-----CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecce
Confidence 36899999999999999999965 46889999998643 334567889999999885 78899999998
Q ss_pred e----cCCeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCC--
Q 039595 821 S----NARHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEF-- 894 (1078)
Q Consensus 821 ~----~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~-- 894 (1078)
. .+...|+||||+ +|++.+++... ....+++.+++.++.||+.||+|||+++ +|+||||||+|||++.++
T Consensus 111 ~~~~~~~~~~~lv~e~~-~~~l~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~ 186 (397)
T 1wak_A 111 KISGVNGTHICMVFEVL-GHHLLKWIIKS-NYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQY 186 (397)
T ss_dssp EEEETTEEEEEEEECCC-CCBHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHH
T ss_pred eecCCCCceEEEEEecc-CccHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchh
Confidence 7 567899999999 55666666332 2356899999999999999999999953 899999999999999775
Q ss_pred -----------------------------------------------cEEEecccccccccCCCCCceeecccccccccc
Q 039595 895 -----------------------------------------------EAHVSDFGIAKFVEPYSSNRTEFVGTFGYAAPE 927 (1078)
Q Consensus 895 -----------------------------------------------~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE 927 (1078)
.+||+|||.++..... .....||+.|+|||
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~---~~~~~gt~~y~aPE 263 (397)
T 1wak_A 187 IRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH---FTEDIQTRQYRSLE 263 (397)
T ss_dssp HHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC---SCSCCSCGGGCCHH
T ss_pred hhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc---CccCCCCCcccCCh
Confidence 7999999999876532 34457899999999
Q ss_pred ccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccc-hhhhhhhhhhhcC------------------C-----CCC
Q 039595 928 IAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSS-FSNMIIEVNQILD------------------P-----RLS 983 (1078)
Q Consensus 928 ~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~-~~~~~~~~~~~~~------------------~-----~~~ 983 (1078)
++.+..++.++|||||||++|||++|+.||......... ............. . ...
T Consensus 264 ~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 343 (397)
T 1wak_A 264 VLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHIT 343 (397)
T ss_dssp HHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCC
T ss_pred hhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccccc
Confidence 999999999999999999999999999998644321100 0000000000000 0 000
Q ss_pred C------------CCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhh
Q 039595 984 T------------PSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGY 1024 (1078)
Q Consensus 984 ~------------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~ 1024 (1078)
. ...........+.+++.+||+.||++|||++|+++|+|+.
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~ 396 (397)
T 1wak_A 344 KLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN 396 (397)
T ss_dssp CCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGG
T ss_pred ccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCcccc
Confidence 0 0011234455788999999999999999999999999974
No 220
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.5e-37 Score=365.44 Aligned_cols=323 Identities=19% Similarity=0.191 Sum_probs=200.0
Q ss_pred cEEeccCCcccccCCCCCCCCCCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeecccc
Q 039595 105 VNLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHN 184 (1078)
Q Consensus 105 ~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n 184 (1078)
+.++.++++++ .+|..+. ++|++|||++|++++..|..|.++++|++|+|++|.+++..|..|+.+++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 45666666665 4555443 46777777777777666666777777777777777666555555555555555555555
Q ss_pred cccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCCCCc
Q 039595 185 NVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPS 264 (1078)
Q Consensus 185 ~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~ 264 (1078)
.+++..+..|+++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|+++
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~----- 165 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLT----- 165 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCS-----
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCc-----
Confidence 555433334455555555555555555444445555555555555555555444444555555555555555544
Q ss_pred ccCCCcccceeecccccccCccccccccccCCceeeecccCCCCCCCccccCCCccCeeeccccccCccCCCCCCCCCcC
Q 039595 265 IIGNLKSLHQLDLIENQLSGSIPLSFGNLSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLNGVIPPSIGNLSSL 344 (1078)
Q Consensus 265 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L 344 (1078)
+..+..|..+++|+.|++++|.+.+..+..|.++++|+.|++++|.+.+.+|..+....+|
T Consensus 166 -------------------~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L 226 (477)
T 2id5_A 166 -------------------SIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNL 226 (477)
T ss_dssp -------------------SCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCC
T ss_pred -------------------ccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccc
Confidence 4444444444444444444454444444455566666666666665555555555555577
Q ss_pred cEEEccCccCCCCCCccccccCCCCeEEcccccCccccCCCCccCCCCceeecccCcCCCCCCccccccCCCCeEEccCc
Q 039595 345 RNLSLFNNGLYGSIPEEIGYLKSLSELKLCKNNLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLKSLTSLKRVRFNQN 424 (1078)
Q Consensus 345 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N 424 (1078)
+.|++++|++++..+..+..+++|+.|+|++|++++..+..|.++++|+.|++++|++.+..|..|..+++|++|++++|
T Consensus 227 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 306 (477)
T 2id5_A 227 TSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGN 306 (477)
T ss_dssp SEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSS
T ss_pred cEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCC
Confidence 77777777777444456677777777777777777766667777777777777777777777777777777777777777
Q ss_pred cccccchhhccCCCCCcEecCCCCccCCcc
Q 039595 425 NLVGKVYEAFGDHPNLTFLDLSQNNFDGKI 454 (1078)
Q Consensus 425 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 454 (1078)
.++.+....|..+++|+.|+|++|++.+..
T Consensus 307 ~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c 336 (477)
T 2id5_A 307 QLTTLEESVFHSVGNLETLILDSNPLACDC 336 (477)
T ss_dssp CCSCCCGGGBSCGGGCCEEECCSSCEECSG
T ss_pred cCceeCHhHcCCCcccCEEEccCCCccCcc
Confidence 777777777777778888888888776543
No 221
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.1e-37 Score=357.37 Aligned_cols=264 Identities=22% Similarity=0.286 Sum_probs=204.3
Q ss_pred hhcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecC----
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNA---- 823 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~---- 823 (1078)
..++|++.+.||+|+||.||+|... +++.||||++.... .....+.+.+|+.++++++||||+++++++...
T Consensus 25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 101 (364)
T 3qyz_A 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE---HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 101 (364)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT---CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTT
T ss_pred ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc---CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccc
Confidence 3468999999999999999999654 78899999986432 334457789999999999999999999998654
Q ss_pred -CeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccc
Q 039595 824 -RHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFG 902 (1078)
Q Consensus 824 -~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 902 (1078)
...++||||+.+ +|.++++. ..+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~~iv~e~~~~-~L~~~l~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg 173 (364)
T 3qyz_A 102 MKDVYIVQDLMET-DLYKLLKT----QHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFG 173 (364)
T ss_dssp CCCEEEEEECCSE-EHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred cceEEEEEcccCc-CHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCc
Confidence 468999999975 99999843 3589999999999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCC---Cceeecccccccccccccc-CCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhh-----
Q 039595 903 IAKFVEPYSS---NRTEFVGTFGYAAPEIAYT-MRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIE----- 973 (1078)
Q Consensus 903 ~a~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~----- 973 (1078)
.++....... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .....+..
T Consensus 174 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~~~i~~~~~~~ 251 (364)
T 3qyz_A 174 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL--DQLNHILGILGSP 251 (364)
T ss_dssp TCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGG--GHHHHHHHHHCSC
T ss_pred ceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChH--HHHHHHHHHhCCC
Confidence 9987653221 1245689999999998664 45899999999999999999999997543221 11111100
Q ss_pred ---------------hhhhcCCCCCCCC-CccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 974 ---------------VNQILDPRLSTPS-PGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 974 ---------------~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
...........+. ........++.+++.+||+.||++|||++|+++|||+..
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~ 319 (364)
T 3qyz_A 252 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319 (364)
T ss_dssp CHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTT
T ss_pred CHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhh
Confidence 0000000000000 000011236789999999999999999999999999764
No 222
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=9.4e-38 Score=346.10 Aligned_cols=249 Identities=21% Similarity=0.341 Sum_probs=198.8
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CC-------CEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeee
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SG-------DIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCS 821 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 821 (1078)
.++|++.+.||+|+||+||+|... ++ ..||+|++.... ....+.+.+|+.++++++||||+++++++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 82 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH----RNYSESFFEAASMMSKLSHKHLVLNYGVCV 82 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG----GGGHHHHHHHHHHHHTSCCTTBCCEEEEEC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc----HHHHHHHHHHHHHHHhCCCCCEeEEEEEEE
Confidence 367899999999999999999654 33 479999986542 344678999999999999999999999999
Q ss_pred cCCeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCc------
Q 039595 822 NARHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFE------ 895 (1078)
Q Consensus 822 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~------ 895 (1078)
+++..++||||+++|+|.+++... ...+++..++.++.||+.||+|||++ +|+||||||+||+++.++.
T Consensus 83 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~ 157 (289)
T 4fvq_A 83 CGDENILVQEFVKFGSLDTYLKKN--KNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNP 157 (289)
T ss_dssp CTTCCEEEEECCTTCBHHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBC
T ss_pred eCCCCEEEEECCCCCCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCccccccc
Confidence 999999999999999999999542 23489999999999999999999999 9999999999999998887
Q ss_pred --EEEecccccccccCCCCCceeecccccccccccccc-CCCCccchhHHHHHHHHHHHhCCCC-CCcccccccchhhhh
Q 039595 896 --AHVSDFGIAKFVEPYSSNRTEFVGTFGYAAPEIAYT-MRATEKYDVYSFGVLVFEVIKGNHP-RDFFSINFSSFSNMI 971 (1078)
Q Consensus 896 --~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltG~~p-~~~~~~~~~~~~~~~ 971 (1078)
+||+|||.+..... .....||+.|+|||.+.+ ..++.++|||||||++|||++|..| |...... .... .
T Consensus 158 ~~~kl~Dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~--~~~~-~ 230 (289)
T 4fvq_A 158 PFIKLSDPGISITVLP----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQ--RKLQ-F 230 (289)
T ss_dssp CEEEECCCCSCTTTSC----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHH-H
T ss_pred ceeeeccCcccccccC----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchH--HHHH-H
Confidence 99999999975432 234568999999999987 6799999999999999999996554 3321111 0000 0
Q ss_pred hhhhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhh
Q 039595 972 IEVNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGY 1024 (1078)
Q Consensus 972 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~ 1024 (1078)
. ...+......+ ..+.+++.+||+.||++|||++|++++.-..
T Consensus 231 ~----~~~~~~~~~~~------~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l 273 (289)
T 4fvq_A 231 Y----EDRHQLPAPKA------AELANLINNCMDYEPDHRPSFRAIIRDLNSL 273 (289)
T ss_dssp H----HTTCCCCCCSS------CTTHHHHHHHSCSSGGGSCCHHHHHHHHHTC
T ss_pred h----hccCCCCCCCC------HHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence 0 01111111111 1467889999999999999999999986544
No 223
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1.5e-37 Score=357.09 Aligned_cols=260 Identities=22% Similarity=0.304 Sum_probs=200.3
Q ss_pred hcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCee--
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHS-- 826 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~-- 826 (1078)
.++|...+.||+|+||.||+|.. .+|+.||||++.... ......+.+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 118 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF--QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRN 118 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTT--SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTT
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccc--cchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccc
Confidence 46899999999999999999965 478999999997643 2334467788999999999999999999999877655
Q ss_pred ----EEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccc
Q 039595 827 ----FLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFG 902 (1078)
Q Consensus 827 ----~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 902 (1078)
++||||+. |+|.+++. ..+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 119 ~~~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg 189 (371)
T 4exu_A 119 FYDFYLVMPFMQ-TDLQKIMG-----MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFG 189 (371)
T ss_dssp CCCCEEEEECCC-EEHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTT
T ss_pred ceeEEEEEcccc-ccHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecC
Confidence 99999997 58988872 3489999999999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCCceeecccccccccccccc-CCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhh--------
Q 039595 903 IAKFVEPYSSNRTEFVGTFGYAAPEIAYT-MRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIE-------- 973 (1078)
Q Consensus 903 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~-------- 973 (1078)
+++.... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .....+..
T Consensus 190 ~a~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~i~~~~~~~~~~ 264 (371)
T 4exu_A 190 LARHADA---EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL--DQLTQILKVTGVPGTE 264 (371)
T ss_dssp CC-----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCCCCHH
T ss_pred ccccccc---CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHhCCCcHH
Confidence 9986543 2345678999999999887 67899999999999999999999997643211 11110000
Q ss_pred ------------hhhhcCCCCCCCCC-ccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 974 ------------VNQILDPRLSTPSP-GVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 974 ------------~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
.............. ........+.+++.+||+.||++|||++|+++|+|+..
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~ 329 (371)
T 4exu_A 265 FVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEP 329 (371)
T ss_dssp HHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTT
T ss_pred HHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCccccc
Confidence 00000000000000 00011236789999999999999999999999999763
No 224
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=8.3e-38 Score=368.33 Aligned_cols=252 Identities=25% Similarity=0.412 Sum_probs=197.6
Q ss_pred hhcCCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
..++|++.+.||+|+||.||+|.++.+..||||+++... ...+.|.+|+.++++++||||+++++++.+ +..++
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~i 255 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYI 255 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-----SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-----CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEE
Confidence 346788999999999999999998877889999987542 235679999999999999999999999876 67899
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVE 908 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~ 908 (1078)
||||+++|+|.++++.. ....+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 256 v~e~~~~gsL~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 331 (452)
T 1fmk_A 256 VTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIE 331 (452)
T ss_dssp EECCCTTCBHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC---
T ss_pred EehhhcCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecC
Confidence 99999999999999432 234589999999999999999999999 99999999999999999999999999998764
Q ss_pred CCC-CCceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccchhhhhhhhhhhcCCCCCCCC
Q 039595 909 PYS-SNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPS 986 (1078)
Q Consensus 909 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 986 (1078)
... .......+++.|+|||.+.+..++.++|||||||++|||++ |+.||..... ......+ ........ .
T Consensus 332 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~--~~~~~~i---~~~~~~~~---~ 403 (452)
T 1fmk_A 332 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQV---ERGYRMPC---P 403 (452)
T ss_dssp -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHHHH---HTTCCCCC---C
T ss_pred CCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH--HHHHHHH---HcCCCCCC---C
Confidence 322 22234457889999999999999999999999999999999 9999753322 1111111 11111111 1
Q ss_pred CccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHh
Q 039595 987 PGVMDKLISIMEVAILCLDESPEARPTMEKGFGHH 1021 (1078)
Q Consensus 987 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~ 1021 (1078)
.... ..+.+++.+||+.||++|||++++++..
T Consensus 404 ~~~~---~~l~~li~~cl~~dP~~Rpt~~~l~~~L 435 (452)
T 1fmk_A 404 PECP---ESLHDLMCQCWRKEPEERPTFEYLQAFL 435 (452)
T ss_dssp TTSC---HHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCC---HHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 1122 2577889999999999999999988653
No 225
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=2.4e-37 Score=347.65 Aligned_cols=257 Identities=23% Similarity=0.348 Sum_probs=201.4
Q ss_pred CCccceeccCCceeEEEEEeC-----CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeec--CCe
Q 039595 753 FDEKFCIGKGGQGSVYKAELP-----SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSN--ARH 825 (1078)
Q Consensus 753 ~~~~~~lG~G~~g~V~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~ 825 (1078)
|++.+.||+|+||+||+|.++ +++.||||++.... .....+.+.+|+.++++++||||+++++++.+ ...
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA---GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAAS 109 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc---ChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCce
Confidence 489999999999999988643 68899999997542 34456779999999999999999999999976 467
Q ss_pred eEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccc
Q 039595 826 SFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAK 905 (1078)
Q Consensus 826 ~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~ 905 (1078)
.++||||+++|+|.+++.. ..+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||.+.
T Consensus 110 ~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 182 (318)
T 3lxp_A 110 LQLVMEYVPLGSLRDYLPR----HSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAK 182 (318)
T ss_dssp EEEEECCCTTCBHHHHGGG----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCE
T ss_pred EEEEEecccCCcHHHHHhh----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccc
Confidence 8999999999999999943 3489999999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCC---CceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccc------hhhhhhhhhh
Q 039595 906 FVEPYSS---NRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSS------FSNMIIEVNQ 976 (1078)
Q Consensus 906 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~------~~~~~~~~~~ 976 (1078)
....... ......||..|+|||.+.+..++.++||||+|+++|||++|+.||......... ..........
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (318)
T 3lxp_A 183 AVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTE 262 (318)
T ss_dssp ECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHH
T ss_pred cccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHH
Confidence 7754332 123456788899999999989999999999999999999999997533221100 0000011111
Q ss_pred hcCCCCCC-CCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhh
Q 039595 977 ILDPRLST-PSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHI 1022 (1078)
Q Consensus 977 ~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~ 1022 (1078)
........ ..... ...+.+++.+||+.||++|||++|+++..-
T Consensus 263 ~~~~~~~~~~~~~~---~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 306 (318)
T 3lxp_A 263 LLERGERLPRPDKC---PAEVYHLMKNCWETEASFRPTFENLIPILK 306 (318)
T ss_dssp HHHTTCCCCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHhcccCCCCCccc---cHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 11111111 11112 236788999999999999999999997643
No 226
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=5.1e-39 Score=358.86 Aligned_cols=256 Identities=24% Similarity=0.350 Sum_probs=184.6
Q ss_pred hcCCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhc--CCCCceeeEEeeeecCC---
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNE--IRHRNIVKFHGFCSNAR--- 824 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~--- 824 (1078)
.++|++.+.||+|+||.||+|+.. ++.||||++... ....+.+|.+++.. ++||||+++++++....
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 73 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR-------EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 73 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T-------THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSS
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc-------chhhHHHHHHHHHHHhccCcceeeeeeecccCCCcc
Confidence 368999999999999999999875 899999998543 24556777788777 79999999999997765
Q ss_pred -eeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHH--------hcCCCCcEecCCCCCCeeeCCCCc
Q 039595 825 -HSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLH--------HDCLPSIIHRDISSKNVLLDLEFE 895 (1078)
Q Consensus 825 -~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~ivH~Dlk~~NIll~~~~~ 895 (1078)
..++||||+++|+|.+++++ ..+++.+++.++.|++.||+||| +. +|+||||||+||+++.++.
T Consensus 74 ~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~ 146 (303)
T 3gxj_A 74 TQLWLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGT 146 (303)
T ss_dssp EEEEEEEECCTTCCHHHHHHH----CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCC
T ss_pred ceeEEEEeccCCCCHHHHHhc----cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCC
Confidence 78999999999999999943 35788889999999999999999 77 9999999999999999999
Q ss_pred EEEecccccccccCCCCC----ceeeccccccccccccccC------CCCccchhHHHHHHHHHHHhC----------CC
Q 039595 896 AHVSDFGIAKFVEPYSSN----RTEFVGTFGYAAPEIAYTM------RATEKYDVYSFGVLVFEVIKG----------NH 955 (1078)
Q Consensus 896 ~kl~DfG~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~------~~~~~sDvwSlG~il~elltG----------~~ 955 (1078)
+||+|||+++........ .....||+.|+|||++.+. .++.++|||||||++|||++| +.
T Consensus 147 ~kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~ 226 (303)
T 3gxj_A 147 CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL 226 (303)
T ss_dssp C-BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCC
T ss_pred EEEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeec
Confidence 999999999866543322 2344799999999998876 344689999999999999999 55
Q ss_pred CCCcccccccchhhhhhhhhhhcCCCCCCCCCc---cHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhh
Q 039595 956 PRDFFSINFSSFSNMIIEVNQILDPRLSTPSPG---VMDKLISIMEVAILCLDESPEARPTMEKGFGHHIG 1023 (1078)
Q Consensus 956 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~ 1023 (1078)
||.............. ............+. .......+.+++.+||+.||++|||++|+++....
T Consensus 227 p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~ 294 (303)
T 3gxj_A 227 PYYDLVPSDPSVEEMR---KVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 294 (303)
T ss_dssp TTTTTCC-CCCCC-CH---HHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC
T ss_pred cccccCCCCccHHHHH---HHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHH
Confidence 6433221111111111 11111222221111 12445578999999999999999999999987543
No 227
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.5e-37 Score=351.07 Aligned_cols=260 Identities=25% Similarity=0.349 Sum_probs=203.4
Q ss_pred hcCCCccceeccCCceeEEEEEe------CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecC
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAEL------PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNA 823 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 823 (1078)
.++|++.+.||+|+||.||+|.+ .+++.||||++.... .......+.+|+.++++++||||+++++++.+.
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 105 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC---SEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 105 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc---chhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCC
Confidence 46899999999999999999974 257789999986432 334566788999999999999999999999999
Q ss_pred CeeEEEEeecCCCCHHHHhcCCCC----CCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCC---CCcE
Q 039595 824 RHSFLVCEYLHRGSLARILGNDAT----AKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDL---EFEA 896 (1078)
Q Consensus 824 ~~~~lv~E~~~~g~L~~~l~~~~~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~ 896 (1078)
...++||||+++|+|.+++..... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++. ++.+
T Consensus 106 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~ 182 (327)
T 2yfx_A 106 LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVA 182 (327)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCE
T ss_pred CCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceE
Confidence 999999999999999999964321 24589999999999999999999999 9999999999999984 4569
Q ss_pred EEecccccccccCCCC--CceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccchhhhhhh
Q 039595 897 HVSDFGIAKFVEPYSS--NRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSINFSSFSNMIIE 973 (1078)
Q Consensus 897 kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~~~~~~~~~~~ 973 (1078)
||+|||.++....... ......||+.|+|||.+.+..++.++||||||+++|||++ |+.||..... ......+
T Consensus 183 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~~~-- 258 (327)
T 2yfx_A 183 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFV-- 258 (327)
T ss_dssp EECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHHHHH--
T ss_pred EECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH--HHHHHHH--
Confidence 9999999986543221 2234567899999999999999999999999999999998 9999753321 1111111
Q ss_pred hhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhhh
Q 039595 974 VNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYCD 1026 (1078)
Q Consensus 974 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~~ 1026 (1078)
............. ..+.+++.+||+.||++|||++|+++++|....
T Consensus 259 ----~~~~~~~~~~~~~---~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~ 304 (327)
T 2yfx_A 259 ----TSGGRMDPPKNCP---GPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 304 (327)
T ss_dssp ----HTTCCCCCCTTCC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----hcCCCCCCCCCCC---HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence 1111111111122 257789999999999999999999999986544
No 228
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-37 Score=357.37 Aligned_cols=252 Identities=25% Similarity=0.390 Sum_probs=189.3
Q ss_pred CCCccceeccCCceeEEEEEeC--CC--CEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeee-cCCee
Q 039595 752 DFDEKFCIGKGGQGSVYKAELP--SG--DIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCS-NARHS 826 (1078)
Q Consensus 752 ~~~~~~~lG~G~~g~V~~~~~~--~~--~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-~~~~~ 826 (1078)
.|++.+.||+|+||+||+|... ++ ..||||.+... ......+.+.+|+.++++++||||+++++++. .++..
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ 166 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI---TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP 166 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC---SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCC
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC---CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCe
Confidence 4677789999999999999653 22 36899988653 23455678999999999999999999999864 45688
Q ss_pred EEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccc
Q 039595 827 FLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKF 906 (1078)
Q Consensus 827 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~ 906 (1078)
++||||+++|+|.++++.. ...+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 167 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~ 241 (373)
T 3c1x_A 167 LVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARD 241 (373)
T ss_dssp EEEEECCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred EEEEECCCCCCHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccc
Confidence 9999999999999999543 34578999999999999999999999 999999999999999999999999999986
Q ss_pred ccCCCC----CceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccchhhhhhhhhhhcCCC
Q 039595 907 VEPYSS----NRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSINFSSFSNMIIEVNQILDPR 981 (1078)
Q Consensus 907 ~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 981 (1078)
...... ......+|+.|+|||.+.+..++.++|||||||++|||++ |.+||..... ........... .+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~--~~~~~~~~~~~---~~~ 316 (373)
T 3c1x_A 242 MYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT--FDITVYLLQGR---RLL 316 (373)
T ss_dssp ----------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCS--SCHHHHHHTTC---CCC
T ss_pred ccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCH--HHHHHHHHcCC---CCC
Confidence 643221 1234567889999999999999999999999999999999 6777653322 11111111111 111
Q ss_pred CCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhh
Q 039595 982 LSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHI 1022 (1078)
Q Consensus 982 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~ 1022 (1078)
...... ..+.+++.+||+.||++|||++|++++.-
T Consensus 317 ---~p~~~~---~~l~~li~~cl~~dp~~RPs~~ell~~L~ 351 (373)
T 3c1x_A 317 ---QPEYCP---DPLYEVMLKCWHPKAEMRPSFSELVSRIS 351 (373)
T ss_dssp ---CCTTCC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---CCCCCC---HHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111112 25778899999999999999999997644
No 229
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.9e-37 Score=342.69 Aligned_cols=249 Identities=22% Similarity=0.353 Sum_probs=203.3
Q ss_pred hhcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeec-----
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSN----- 822 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----- 822 (1078)
...+|+..+.||+|+||.||+|... +++.||+|++.... +.+.+|+.++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 80 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN--------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDP 80 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS--------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc--------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCc
Confidence 3467999999999999999999765 79999999986542 246789999999999999999998854
Q ss_pred -----------CCeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeC
Q 039595 823 -----------ARHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLD 891 (1078)
Q Consensus 823 -----------~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~ 891 (1078)
....++||||+++|+|.+++... ....+++..++.++.|++.||+|||++ +|+||||||+||+++
T Consensus 81 ~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~ 156 (284)
T 2a19_B 81 ETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR-RGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLV 156 (284)
T ss_dssp --------CCEEEEEEEEECCCCSCBHHHHHHHG-GGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEE
T ss_pred ccccccccccCcceEEEEEeccCCCCHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEc
Confidence 45589999999999999999543 235689999999999999999999999 999999999999999
Q ss_pred CCCcEEEecccccccccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhh
Q 039595 892 LEFEAHVSDFGIAKFVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMI 971 (1078)
Q Consensus 892 ~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~ 971 (1078)
.++.+||+|||.+....... ......|++.|+|||.+.+..++.++||||||+++|||++|..|+.... ..
T Consensus 157 ~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-------~~- 227 (284)
T 2a19_B 157 DTKQVKIGDFGLVTSLKNDG-KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS-------KF- 227 (284)
T ss_dssp ETTEEEECCCTTCEESSCCS-CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH-------HH-
T ss_pred CCCCEEECcchhheeccccc-cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH-------HH-
Confidence 99999999999998765432 2344579999999999999999999999999999999999999842111 01
Q ss_pred hhhhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhhh
Q 039595 972 IEVNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYCD 1026 (1078)
Q Consensus 972 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~~ 1026 (1078)
............. . ..+.+++.+||+.||++|||++|++++++....
T Consensus 228 --~~~~~~~~~~~~~---~---~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~ 274 (284)
T 2a19_B 228 --FTDLRDGIISDIF---D---KKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKK 274 (284)
T ss_dssp --HHHHHTTCCCTTS---C---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC
T ss_pred --HHHhhcccccccC---C---HHHHHHHHHHccCChhhCcCHHHHHHHHHHHhh
Confidence 1111111221111 1 256788999999999999999999999886543
No 230
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=9.8e-38 Score=352.46 Aligned_cols=262 Identities=24% Similarity=0.345 Sum_probs=205.3
Q ss_pred cCCCccceeccCCceeEEEEEe-----CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeee--cC
Q 039595 751 DDFDEKFCIGKGGQGSVYKAEL-----PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCS--NA 823 (1078)
Q Consensus 751 ~~~~~~~~lG~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~ 823 (1078)
++|++.+.||+|+||.||+|++ .+++.||||++... .....+.+.+|+.++++++||||+++++++. +.
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 98 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS----GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGR 98 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC----CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSS
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC----CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCC
Confidence 6899999999999999999973 36889999998754 3445677899999999999999999999885 55
Q ss_pred CeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccc
Q 039595 824 RHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGI 903 (1078)
Q Consensus 824 ~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~ 903 (1078)
...++||||+++|+|.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 173 (327)
T 3lxl_A 99 QSLRLVMEYLPSGCLRDFLQRH--RARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGL 173 (327)
T ss_dssp CEEEEEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGG
T ss_pred ceEEEEEeecCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEccccc
Confidence 6789999999999999999532 24589999999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCC---CceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccch------hhhhhhh
Q 039595 904 AKFVEPYSS---NRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSF------SNMIIEV 974 (1078)
Q Consensus 904 a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~------~~~~~~~ 974 (1078)
++....... ......||+.|+|||++.+..++.++||||||+++|+|++|+.||.......... .......
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 253 (327)
T 3lxl_A 174 AKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRL 253 (327)
T ss_dssp CEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHH
T ss_pred ceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHH
Confidence 987654332 1234467888999999999899999999999999999999999964322211000 0000111
Q ss_pred hhhcCCCCC-CCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhh
Q 039595 975 NQILDPRLS-TPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGY 1024 (1078)
Q Consensus 975 ~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~ 1024 (1078)
......... ...... ...+.+++.+||+.||++|||++|++++.-..
T Consensus 254 ~~~~~~~~~~~~~~~~---~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 301 (327)
T 3lxl_A 254 LELLEEGQRLPAPPAC---PAEVHELMKLCWAPSPQDRPSFSALGPQLDML 301 (327)
T ss_dssp HHHHHTTCCCCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC
T ss_pred HHHhhcccCCCCCCcc---cHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 111111111 111112 23577889999999999999999998886543
No 231
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=2.1e-37 Score=345.62 Aligned_cols=260 Identities=21% Similarity=0.326 Sum_probs=200.7
Q ss_pred cCCCccceeccCCceeEEEEEe-----CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecC--
Q 039595 751 DDFDEKFCIGKGGQGSVYKAEL-----PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNA-- 823 (1078)
Q Consensus 751 ~~~~~~~~lG~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-- 823 (1078)
++|+..+.||+|+||.||+|.+ .+++.||||++.... .....+.+.+|+.++++++||||+++++++.+.
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 97 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES---GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGG 97 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC--------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc---cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCC
Confidence 5688999999999999999973 368899999997543 233457789999999999999999999999776
Q ss_pred CeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccc
Q 039595 824 RHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGI 903 (1078)
Q Consensus 824 ~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~ 903 (1078)
...++||||+++|+|.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.
T Consensus 98 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~ 172 (302)
T 4e5w_A 98 NGIKLIMEFLPSGSLKEYLPKN--KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGL 172 (302)
T ss_dssp CCEEEEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTT
T ss_pred ceEEEEEEeCCCCcHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccc
Confidence 6689999999999999999432 34589999999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCC---CceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccc-------ccchhhhhhh
Q 039595 904 AKFVEPYSS---NRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSIN-------FSSFSNMIIE 973 (1078)
Q Consensus 904 a~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~-------~~~~~~~~~~ 973 (1078)
+........ ......||..|+|||.+.+..++.++||||+|+++|||++|+.|+...... ..........
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 252 (302)
T 4e5w_A 173 TKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRL 252 (302)
T ss_dssp CEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHH
T ss_pred cccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHH
Confidence 987754432 223456788899999999999999999999999999999999985322110 0000000001
Q ss_pred hhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHh
Q 039595 974 VNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHH 1021 (1078)
Q Consensus 974 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~ 1021 (1078)
................. ..+.+++.+||+.||++|||++|+++..
T Consensus 253 ~~~~~~~~~~~~~~~~~---~~l~~li~~~l~~dp~~Rps~~~ll~~L 297 (302)
T 4e5w_A 253 VNTLKEGKRLPCPPNCP---DEVYQLMRKCWEFQPSNRTSFQNLIEGF 297 (302)
T ss_dssp HHHHHTTCCCCCCTTCC---HHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred HHHHhccCCCCCCCCCC---HHHHHHHHHHcCCCCCCCCCHHHHHHHH
Confidence 11111111111111122 3577899999999999999999999764
No 232
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=5.1e-37 Score=349.01 Aligned_cols=260 Identities=24% Similarity=0.336 Sum_probs=203.3
Q ss_pred HHHhhcCCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhc--CCCCceeeEEeeeecC
Q 039595 746 IIKATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNE--IRHRNIVKFHGFCSNA 823 (1078)
Q Consensus 746 ~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~ 823 (1078)
-....++|++.+.||+|+||.||+|+. +|+.||||++... ..+.+.+|+++++. ++||||+++++++...
T Consensus 37 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-------~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~ 108 (342)
T 1b6c_B 37 QRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-------EERSWFREAEIYQTVMLRHENILGFIAADNKD 108 (342)
T ss_dssp HHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG-------GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECC
T ss_pred cccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch-------hHHHHHHHHHHHHHhhcCCCcEEEEEeeeccc
Confidence 344567899999999999999999987 4899999998543 24567778888777 7999999999999876
Q ss_pred C----eeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHH--------hcCCCCcEecCCCCCCeeeC
Q 039595 824 R----HSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLH--------HDCLPSIIHRDISSKNVLLD 891 (1078)
Q Consensus 824 ~----~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~ivH~Dlk~~NIll~ 891 (1078)
. ..++||||+++|+|.+++.+ ..+++.+++.++.|++.||+||| +. +|+||||||+||+++
T Consensus 109 ~~~~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~ 181 (342)
T 1b6c_B 109 NGTWTQLWLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVK 181 (342)
T ss_dssp CSSCCCEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEEC
T ss_pred CCccceeEEEEeecCCCcHHHHHhc----cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEEC
Confidence 5 78999999999999999943 35899999999999999999999 77 999999999999999
Q ss_pred CCCcEEEecccccccccCCCCC----ceeeccccccccccccccCC------CCccchhHHHHHHHHHHHhC--------
Q 039595 892 LEFEAHVSDFGIAKFVEPYSSN----RTEFVGTFGYAAPEIAYTMR------ATEKYDVYSFGVLVFEVIKG-------- 953 (1078)
Q Consensus 892 ~~~~~kl~DfG~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~------~~~~sDvwSlG~il~elltG-------- 953 (1078)
.++.+||+|||++......... .....||+.|+|||.+.+.. ++.++|||||||++|||++|
T Consensus 182 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~ 261 (342)
T 1b6c_B 182 KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHE 261 (342)
T ss_dssp TTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCC
T ss_pred CCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccc
Confidence 9999999999999876543321 23457999999999988752 34689999999999999999
Q ss_pred --CCCCCcccccccchhhhhhhhhhhcCCCCCCCCCc---cHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhh
Q 039595 954 --NHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSPG---VMDKLISIMEVAILCLDESPEARPTMEKGFGHHIG 1023 (1078)
Q Consensus 954 --~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~ 1023 (1078)
+.||.............. ..+.........+. .......+.+++.+||+.||++|||++|++++...
T Consensus 262 ~~~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~ 333 (342)
T 1b6c_B 262 DYQLPYYDLVPSDPSVEEMR---KVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 333 (342)
T ss_dssp CCCCTTTTTSCSSCCHHHHH---HHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred ccccCccccCcCcccHHHHH---HHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence 677643322111111111 11112222222111 12445578899999999999999999999988653
No 233
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.9e-37 Score=347.05 Aligned_cols=258 Identities=24% Similarity=0.348 Sum_probs=194.8
Q ss_pred hhcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeE
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSF 827 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 827 (1078)
..++|++.+.||+|+||.||+|... +++.||+|++..... ......+.+.+|+.++++++||||+++++++..++..+
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~ 110 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLS-SDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLY 110 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGG-GSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccc-cCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEE
Confidence 4578999999999999999999764 788999999976532 23444577899999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccccc
Q 039595 828 LVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFV 907 (1078)
Q Consensus 828 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~ 907 (1078)
+||||+++++|.+++.. ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++...
T Consensus 111 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 184 (309)
T 2h34_A 111 VDMRLINGVDLAAMLRR---QGPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASAT 184 (309)
T ss_dssp EEEECCCCEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC----
T ss_pred EEEEecCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCccc
Confidence 99999999999999953 34689999999999999999999999 9999999999999999999999999999866
Q ss_pred cCCC-CCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCC
Q 039595 908 EPYS-SNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPS 986 (1078)
Q Consensus 908 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 986 (1078)
.... .......|++.|+|||.+.+..++.++||||||+++|||++|+.||...... ..... ..... +......
T Consensus 185 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~---~~~~~-~~~~~~~ 258 (309)
T 2h34_A 185 TDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGAH---INQAI-PRPSTVR 258 (309)
T ss_dssp ------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHHH---HHSCC-CCGGGTS
T ss_pred cccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHHH---hccCC-CCccccC
Confidence 5432 2234567899999999999999999999999999999999999997643221 11111 11111 1100011
Q ss_pred CccHHHHHHHHHHHHhcccCCCCCCC-ChhHHHHHhh
Q 039595 987 PGVMDKLISIMEVAILCLDESPEARP-TMEKGFGHHI 1022 (1078)
Q Consensus 987 ~~~~~~~~~l~~li~~cl~~dP~~RP-t~~ell~h~~ 1022 (1078)
+... ..+.+++.+||+.||++|| +++++++...
T Consensus 259 ~~~~---~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~ 292 (309)
T 2h34_A 259 PGIP---VAFDAVIARGMAKNPEDRYVTCGDLSAAAH 292 (309)
T ss_dssp TTCC---THHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred CCCC---HHHHHHHHHhccCCHHHHHHhHHHHHHHHH
Confidence 1111 2577889999999999999 8888776543
No 234
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=3.4e-37 Score=349.89 Aligned_cols=261 Identities=18% Similarity=0.227 Sum_probs=205.5
Q ss_pred hcCCCccceeccCCceeEEEEEe--CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCc------eeeEEeeee
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAEL--PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRN------IVKFHGFCS 821 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~~~~~ 821 (1078)
.++|++.+.||+|+||+||+|.. .+++.||||++... ....+.+.+|+.+++.++|++ ++++++++.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~ 87 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-----DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFE 87 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-----HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-----CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccc
Confidence 46899999999999999999965 36889999998643 234567888999988887654 999999999
Q ss_pred cCCeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCC---------
Q 039595 822 NARHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDL--------- 892 (1078)
Q Consensus 822 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~--------- 892 (1078)
..+..++||||+ +++|.+++... ....+++.++..++.||+.||+|||++ +|+||||||+||+++.
T Consensus 88 ~~~~~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~ 162 (339)
T 1z57_A 88 HHGHICIVFELL-GLSTYDFIKEN-GFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNP 162 (339)
T ss_dssp ETTEEEEEEECC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC-
T ss_pred cCCcEEEEEcCC-CCCHHHHHHhc-CCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCC
Confidence 999999999999 88999998543 234688999999999999999999999 9999999999999987
Q ss_pred ----------CCcEEEecccccccccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccc
Q 039595 893 ----------EFEAHVSDFGIAKFVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSI 962 (1078)
Q Consensus 893 ----------~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~ 962 (1078)
++.+||+|||.++.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 163 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 239 (339)
T 1z57_A 163 KIKRDERTLINPDIKVVDFGSATYDDE---HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDS 239 (339)
T ss_dssp ---CEEEEESCCCEEECCCSSCEETTS---CCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCH
T ss_pred ccccccccccCCCceEeeCcccccCcc---ccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCh
Confidence 67899999999986543 23456789999999999999999999999999999999999999764332
Q ss_pred cccchhhhhhhhhhhc----------------------------------CCCCCCCCCccHHHHHHHHHHHHhcccCCC
Q 039595 963 NFSSFSNMIIEVNQIL----------------------------------DPRLSTPSPGVMDKLISIMEVAILCLDESP 1008 (1078)
Q Consensus 963 ~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP 1008 (1078)
.. ....+....... ................++.+++.+||+.||
T Consensus 240 ~~--~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP 317 (339)
T 1z57_A 240 KE--HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDP 317 (339)
T ss_dssp HH--HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSST
T ss_pred HH--HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCc
Confidence 11 011000000000 000000001112334578899999999999
Q ss_pred CCCCChhHHHHHhhhhh
Q 039595 1009 EARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 1009 ~~RPt~~ell~h~~~~~ 1025 (1078)
++|||++|+++|+|+..
T Consensus 318 ~~Rpt~~ell~hp~f~~ 334 (339)
T 1z57_A 318 AKRITLREALKHPFFDL 334 (339)
T ss_dssp TTSCCHHHHTTSGGGGG
T ss_pred ccccCHHHHhcCHHHHH
Confidence 99999999999999764
No 235
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=9.6e-38 Score=355.09 Aligned_cols=265 Identities=16% Similarity=0.168 Sum_probs=194.9
Q ss_pred hcCCCccceeccCCceeEEEEEeC----CCCEEEEEEeccccccCC-------hhhHHHHHHHHHHHhcCCCCceeeEEe
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP----SGDIVAVKKFNSQLLSGN-------MADQDEFLNVVLALNEIRHRNIVKFHG 818 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~-------~~~~~~~~~e~~~l~~l~h~niv~l~~ 818 (1078)
.++|++.+.||+|+||+||+|... ++..||||++........ ......+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 367999999999999999999765 578899999875421100 001234667888999999999999999
Q ss_pred eeec----CCeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCC
Q 039595 819 FCSN----ARHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEF 894 (1078)
Q Consensus 819 ~~~~----~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~ 894 (1078)
++.. ....|+||||+ +++|.+++.. .+.+++.+++.++.||+.||+|||++ +|+||||||+||+++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~ 188 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQ---NGTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKN 188 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBG---GGBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCC
Confidence 9977 78899999999 9999999943 23799999999999999999999999 999999999999998887
Q ss_pred --cEEEecccccccccCCC-------CCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccc
Q 039595 895 --EAHVSDFGIAKFVEPYS-------SNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFS 965 (1078)
Q Consensus 895 --~~kl~DfG~a~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~ 965 (1078)
.+||+|||+++.+.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 189 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~ 268 (345)
T 2v62_A 189 PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPV 268 (345)
T ss_dssp TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHH
T ss_pred CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccH
Confidence 99999999998764321 112455799999999999999999999999999999999999999753222221
Q ss_pred chhhhhhhhhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhh
Q 039595 966 SFSNMIIEVNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHI 1022 (1078)
Q Consensus 966 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~ 1022 (1078)
............+++......+ .......+.+++.+||+.||++|||++++++...
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 324 (345)
T 2v62_A 269 AVQTAKTNLLDELPQSVLKWAP-SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILN 324 (345)
T ss_dssp HHHHHHHHHHHTTTHHHHHHSC-TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHC
T ss_pred HHHHHHHhhcccccHHHHhhcc-ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHh
Confidence 1111111111111110000000 0011126788899999999999999999987654
No 236
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2e-37 Score=345.13 Aligned_cols=256 Identities=18% Similarity=0.205 Sum_probs=202.4
Q ss_pred hcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcC-CCCceeeEEeeeecCCeeE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEI-RHRNIVKFHGFCSNARHSF 827 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 827 (1078)
.++|++.+.||+|+||+||+|.. .+++.||||++.... ..+.+.+|+.+++.+ +|++++++++++.++...+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~ 82 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS------DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNV 82 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT------TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC------ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeE
Confidence 46799999999999999999975 578999999986532 123477889999999 7999999999999999999
Q ss_pred EEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCc-----EEEeccc
Q 039595 828 LVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFE-----AHVSDFG 902 (1078)
Q Consensus 828 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~-----~kl~DfG 902 (1078)
+||||+ +++|.+++... ...+++.+++.++.||+.||+|||++ +|+||||||+||+++.++. +||+|||
T Consensus 83 lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg 156 (298)
T 1csn_A 83 LVIDLL-GPSLEDLLDLC--GRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFG 156 (298)
T ss_dssp EEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCT
T ss_pred EEEEec-CCCHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECc
Confidence 999999 99999999543 34589999999999999999999999 9999999999999987776 9999999
Q ss_pred ccccccCCCC-------CceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccc-cchhhhhhhh
Q 039595 903 IAKFVEPYSS-------NRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINF-SSFSNMIIEV 974 (1078)
Q Consensus 903 ~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~-~~~~~~~~~~ 974 (1078)
.++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ......+...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 236 (298)
T 1csn_A 157 MVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEK 236 (298)
T ss_dssp TCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHH
T ss_pred cccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhh
Confidence 9987654322 2345679999999999999999999999999999999999999986543211 1111111111
Q ss_pred hhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhh
Q 039595 975 NQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHI 1022 (1078)
Q Consensus 975 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~ 1022 (1078)
... +......... ...+.+++.+||+.||++||+++++++...
T Consensus 237 ~~~--~~~~~~~~~~---~~~l~~li~~~l~~dp~~RP~~~~l~~~l~ 279 (298)
T 1csn_A 237 KQS--TPLRELCAGF---PEEFYKYMHYARNLAFDATPDYDYLQGLFS 279 (298)
T ss_dssp HHH--SCHHHHTTTS---CHHHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred ccC--ccHHHHHhhC---cHHHHHHHHHHhcCCcccCCCHHHHHHHHH
Confidence 100 0000000011 126778999999999999999999887644
No 237
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=7.7e-38 Score=364.97 Aligned_cols=261 Identities=23% Similarity=0.274 Sum_probs=196.1
Q ss_pred cCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeec------C
Q 039595 751 DDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSN------A 823 (1078)
Q Consensus 751 ~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~ 823 (1078)
.+|+..+.||+|+||+||+|... +|+.||||++..... .+.+|+.++++++||||+++++++.. .
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~--------~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~ 125 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR--------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDE 125 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT--------SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch--------hHHHHHHHHHHcCCCCccceeeEEeccCCCCcc
Confidence 46899999999999999999764 699999999865321 12468999999999999999998843 2
Q ss_pred CeeEEEEeecCCCCHHHHhcC-CCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCC-CcEEEecc
Q 039595 824 RHSFLVCEYLHRGSLARILGN-DATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLE-FEAHVSDF 901 (1078)
Q Consensus 824 ~~~~lv~E~~~~g~L~~~l~~-~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~-~~~kl~Df 901 (1078)
...++||||+++ ++.+.+.. ......+++..++.++.||+.||+|||++ +|+||||||+|||++.+ +.+||+||
T Consensus 126 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DF 201 (420)
T 1j1b_A 126 VYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDF 201 (420)
T ss_dssp EEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCC
T ss_pred eeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccc
Confidence 246799999986 66665532 12345689999999999999999999999 99999999999999965 67899999
Q ss_pred cccccccCCCCCceeeccccccccccccccC-CCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhh------
Q 039595 902 GIAKFVEPYSSNRTEFVGTFGYAAPEIAYTM-RATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEV------ 974 (1078)
Q Consensus 902 G~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~------ 974 (1078)
|+++..... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||...... ..+...+...
T Consensus 202 G~a~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~-~~l~~i~~~lg~p~~~ 279 (420)
T 1j1b_A 202 GSAKQLVRG-EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTRE 279 (420)
T ss_dssp TTCEECCTT-CCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCSCCHH
T ss_pred hhhhhcccC-CCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHH
Confidence 999876442 223456789999999998765 7999999999999999999999997643221 1111111000
Q ss_pred -hhhcCCCCC-----CCCCccH------HHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 975 -NQILDPRLS-----TPSPGVM------DKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 975 -~~~~~~~~~-----~~~~~~~------~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
.....+.+. ....... ....++.+++.+||..||++|||++|+++|+|+..
T Consensus 280 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~ 342 (420)
T 1j1b_A 280 QIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE 342 (420)
T ss_dssp HHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGG
T ss_pred HHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcc
Confidence 000111111 0000000 11236789999999999999999999999999853
No 238
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.1e-37 Score=343.67 Aligned_cols=252 Identities=22% Similarity=0.379 Sum_probs=202.3
Q ss_pred hhcCCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
..++|++.+.||+|+||.||+|..++++.||||++.... ...+.+.+|+.++++++||||+++++++.+ +..++
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 84 (279)
T 1qpc_A 11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-----MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYI 84 (279)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-----SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred CHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-----ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEE
Confidence 457899999999999999999998888899999986542 235678999999999999999999999874 56899
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVE 908 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~ 908 (1078)
||||+++|+|.+++... ....+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+....
T Consensus 85 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 160 (279)
T 1qpc_A 85 ITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIE 160 (279)
T ss_dssp EEECCTTCBHHHHTTSH-HHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEecCCCCCHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCccccccc
Confidence 99999999999999432 223689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCC-CceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccchhhhhhhhhhhcCCCCCCCC
Q 039595 909 PYSS-NRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPS 986 (1078)
Q Consensus 909 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 986 (1078)
.... ......++..|+|||.+.+..++.++||||||+++|||++ |+.||..... ..... .......+...
T Consensus 161 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~~~---~~~~~~~~~~~--- 232 (279)
T 1qpc_A 161 DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--PEVIQ---NLERGYRMVRP--- 232 (279)
T ss_dssp SSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHH---HHHTTCCCCCC---
T ss_pred CcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH--HHHHH---HHhcccCCCCc---
Confidence 4321 1223456789999999998889999999999999999999 9999753322 11111 11111111111
Q ss_pred CccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHh
Q 039595 987 PGVMDKLISIMEVAILCLDESPEARPTMEKGFGHH 1021 (1078)
Q Consensus 987 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~ 1021 (1078)
... ...+.+++.+||+.||++|||++++++..
T Consensus 233 ~~~---~~~l~~li~~~l~~~p~~Rps~~~l~~~l 264 (279)
T 1qpc_A 233 DNC---PEELYQLMRLCWKERPEDRPTFDYLRSVL 264 (279)
T ss_dssp TTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred ccc---cHHHHHHHHHHhccChhhCCCHHHHHHHH
Confidence 111 13677899999999999999999988754
No 239
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=3.1e-37 Score=352.43 Aligned_cols=263 Identities=23% Similarity=0.320 Sum_probs=201.9
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecC-----
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNA----- 823 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----- 823 (1078)
.++|++.+.||+|+||.||+|... +|+.||||++... ........+.+|+.++++++||||+++++++..+
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 86 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF---DKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENF 86 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC---SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc---ccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCcc
Confidence 468999999999999999999765 6899999998643 2344456788999999999999999999988654
Q ss_pred CeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccc
Q 039595 824 RHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGI 903 (1078)
Q Consensus 824 ~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~ 903 (1078)
...++||||+. |+|.+++.. ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.
T Consensus 87 ~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 158 (353)
T 2b9h_A 87 NEVYIIQELMQ-TDLHRVIST----QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGL 158 (353)
T ss_dssp CCEEEEECCCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEeccC-ccHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccc
Confidence 67899999997 589998843 4689999999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCCC----------ceeecccccccccccccc-CCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhh
Q 039595 904 AKFVEPYSSN----------RTEFVGTFGYAAPEIAYT-MRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMII 972 (1078)
Q Consensus 904 a~~~~~~~~~----------~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~ 972 (1078)
++........ .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... .....+.
T Consensus 159 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~ 236 (353)
T 2b9h_A 159 ARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR--HQLLLIF 236 (353)
T ss_dssp CEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHH
T ss_pred ccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcH--HHHHHHH
Confidence 9876432211 123578999999998764 67899999999999999999999997643311 0000000
Q ss_pred hh------------------hhhcC--CCCCCCC--CccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 973 EV------------------NQILD--PRLSTPS--PGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 973 ~~------------------~~~~~--~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
.. ..... +...... ........++.+++.+||+.||++|||++|+++|+|+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 311 (353)
T 2b9h_A 237 GIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQT 311 (353)
T ss_dssp HHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred HHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence 00 00000 0000000 000011236788999999999999999999999999764
No 240
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=4e-37 Score=347.46 Aligned_cols=255 Identities=25% Similarity=0.389 Sum_probs=200.0
Q ss_pred cCCCccceeccCCceeEEEEEeC-CCCE--EEEEEeccccccCChhhHHHHHHHHHHHhcC-CCCceeeEEeeeecCCee
Q 039595 751 DDFDEKFCIGKGGQGSVYKAELP-SGDI--VAVKKFNSQLLSGNMADQDEFLNVVLALNEI-RHRNIVKFHGFCSNARHS 826 (1078)
Q Consensus 751 ~~~~~~~~lG~G~~g~V~~~~~~-~~~~--vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 826 (1078)
++|++.+.||+|+||.||+|... ++.. ||+|++.... .....+.+.+|+.+++++ +||||+++++++.+.+..
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 101 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA---SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 101 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC---------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc---chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCce
Confidence 68999999999999999999654 5664 4999886532 223456688999999999 999999999999999999
Q ss_pred EEEEeecCCCCHHHHhcCCC-------------CCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCC
Q 039595 827 FLVCEYLHRGSLARILGNDA-------------TAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLE 893 (1078)
Q Consensus 827 ~lv~E~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~ 893 (1078)
++||||+++|+|.+++.... ....+++.+++.++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~ 178 (327)
T 1fvr_A 102 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGEN 178 (327)
T ss_dssp EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGG
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCC
Confidence 99999999999999996542 234689999999999999999999999 99999999999999999
Q ss_pred CcEEEecccccccccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccchhhhhh
Q 039595 894 FEAHVSDFGIAKFVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSINFSSFSNMII 972 (1078)
Q Consensus 894 ~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~~~~~~~~~~ 972 (1078)
+.+||+|||+++..... .......+++.|+|||.+.+..++.++|||||||++|||++ |+.||..... .....
T Consensus 179 ~~~kL~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~--~~~~~--- 252 (327)
T 1fvr_A 179 YVAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--AELYE--- 252 (327)
T ss_dssp GCEEECCTTCEESSCEE-CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHH---
T ss_pred CeEEEcccCcCcccccc-ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH--HHHHH---
Confidence 99999999999754321 12234467889999999998889999999999999999998 9999753322 11111
Q ss_pred hhhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhh
Q 039595 973 EVNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIG 1023 (1078)
Q Consensus 973 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~ 1023 (1078)
.......+... .... ..+.+++.+||+.||++|||++|++++...
T Consensus 253 ~~~~~~~~~~~---~~~~---~~l~~li~~~l~~dp~~Rps~~ell~~L~~ 297 (327)
T 1fvr_A 253 KLPQGYRLEKP---LNCD---DEVYDLMRQCWREKPYERPSFAQILVSLNR 297 (327)
T ss_dssp HGGGTCCCCCC---TTBC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HhhcCCCCCCC---CCCC---HHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 11111111111 1112 357789999999999999999999988653
No 241
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.5e-37 Score=356.12 Aligned_cols=271 Identities=21% Similarity=0.232 Sum_probs=193.6
Q ss_pred HHHHHHhhcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeee
Q 039595 743 HEEIIKATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCS 821 (1078)
Q Consensus 743 ~~~~~~~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 821 (1078)
.++.....++|++.+.||+|+||+||+|... +|+.||||++.... .....+.+++..++.++||||+++++++.
T Consensus 15 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~~l~~l~h~niv~~~~~~~ 89 (360)
T 3e3p_A 15 DERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-----RFRNRELQIMQDLAVLHHPNIVQLQSYFY 89 (360)
T ss_dssp SHHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-----TCCCHHHHHHHHHHHHCCTTBCCEEEEEE
T ss_pred hhhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-----cccHHHHHHHHHHHhcCCCCcccHHHhhh
Confidence 3556677899999999999999999999764 78999999986532 12234567788888899999999999985
Q ss_pred cCC-------eeEEEEeecCCCCHHHHhc-CCCCCCcCCHHHHHHHHHHHHHHHHHHH--hcCCCCcEecCCCCCCeeeC
Q 039595 822 NAR-------HSFLVCEYLHRGSLARILG-NDATAKELSWNRRINVIKGVANALSYLH--HDCLPSIIHRDISSKNVLLD 891 (1078)
Q Consensus 822 ~~~-------~~~lv~E~~~~g~L~~~l~-~~~~~~~l~~~~~~~i~~~i~~~L~~LH--~~~~~~ivH~Dlk~~NIll~ 891 (1078)
..+ ..++||||+++ ++.+.+. .......+++..+..++.|++.|+.||| +. +|+||||||+||+++
T Consensus 90 ~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~ 165 (360)
T 3e3p_A 90 TLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVN 165 (360)
T ss_dssp EECSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEE
T ss_pred ccccccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEe
Confidence 433 27899999987 4444332 1234556889999999999999999999 88 999999999999999
Q ss_pred C-CCcEEEecccccccccCCCCCceeeccccccccccccccCC-CCccchhHHHHHHHHHHHhCCCCCCcccccccchhh
Q 039595 892 L-EFEAHVSDFGIAKFVEPYSSNRTEFVGTFGYAAPEIAYTMR-ATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSN 969 (1078)
Q Consensus 892 ~-~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~ 969 (1078)
. ++.+||+|||+++...... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||...... ....
T Consensus 166 ~~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~--~~~~ 242 (360)
T 3e3p_A 166 EADGTLKLCDFGSAKKLSPSE-PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA--GQLH 242 (360)
T ss_dssp TTTTEEEECCCTTCBCCCTTS-CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHH
T ss_pred CCCCcEEEeeCCCceecCCCC-CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH--HHHH
Confidence 7 8999999999998765432 334567899999999987654 899999999999999999999997643321 1111
Q ss_pred hhhh--------hhhhcCCCCCC------CC--------CccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 970 MIIE--------VNQILDPRLST------PS--------PGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 970 ~~~~--------~~~~~~~~~~~------~~--------~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
.+.. ......+.... .. .........+.+++.+||+.||++|||++|+++|+|+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~ 320 (360)
T 3e3p_A 243 EIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDE 320 (360)
T ss_dssp HHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGG
T ss_pred HHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccc
Confidence 1100 00000010000 00 000112346889999999999999999999999999765
No 242
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=4.5e-37 Score=339.11 Aligned_cols=256 Identities=20% Similarity=0.308 Sum_probs=200.6
Q ss_pred hhcCCCccceeccCCceeEEEEEeCC----CCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCC
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAELPS----GDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNAR 824 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 824 (1078)
..++|++.+.||+|+||+||+|.... +..||+|++.... .....+.+.+|+.++++++||||+++++++.++
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~- 85 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC---TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE- 85 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS---CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc---CchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-
Confidence 34689999999999999999996532 3369999987542 344567899999999999999999999998754
Q ss_pred eeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccc
Q 039595 825 HSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIA 904 (1078)
Q Consensus 825 ~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a 904 (1078)
..++||||+++|+|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+
T Consensus 86 ~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 160 (281)
T 3cc6_A 86 PTWIIMELYPYGELGHYLERN--KNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLS 160 (281)
T ss_dssp SCEEEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGG
T ss_pred CCEEEEecCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCC
Confidence 568999999999999999542 34589999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCC-CceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccchhhhhhhhhhhcCCCC
Q 039595 905 KFVEPYSS-NRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSINFSSFSNMIIEVNQILDPRL 982 (1078)
Q Consensus 905 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 982 (1078)
........ ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... ........ ......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~--~~~~~~~~---~~~~~~ 235 (281)
T 3cc6_A 161 RYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK--DVIGVLEK---GDRLPK 235 (281)
T ss_dssp GCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG--GHHHHHHH---TCCCCC
T ss_pred cccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH--HHHHHHhc---CCCCCC
Confidence 87654322 2234567889999999998899999999999999999998 99997533221 11111111 111111
Q ss_pred CCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhh
Q 039595 983 STPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGY 1024 (1078)
Q Consensus 983 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~ 1024 (1078)
. .... ..+.+++.+||+.||++|||++|++++....
T Consensus 236 ~---~~~~---~~l~~li~~~l~~~p~~Rps~~ell~~L~~~ 271 (281)
T 3cc6_A 236 P---DLCP---PVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 271 (281)
T ss_dssp C---TTCC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred C---CCCC---HHHHHHHHHHccCCchhCcCHHHHHHHHHHH
Confidence 1 1111 2577899999999999999999999986543
No 243
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.5e-37 Score=356.25 Aligned_cols=262 Identities=17% Similarity=0.210 Sum_probs=196.3
Q ss_pred hhcCCCccceeccCCceeEEEEEeCC------CCEEEEEEeccccccCC-------hhhHHHHHHHHHHHhcCCCCceee
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAELPS------GDIVAVKKFNSQLLSGN-------MADQDEFLNVVLALNEIRHRNIVK 815 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~~-------~~~~~~~~~e~~~l~~l~h~niv~ 815 (1078)
..++|++.+.||+|+||+||+|.++. ++.||||++........ ......+..|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 34589999999999999999997654 47899999865421000 000122345666778889999999
Q ss_pred EEeeeecC----CeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeC
Q 039595 816 FHGFCSNA----RHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLD 891 (1078)
Q Consensus 816 l~~~~~~~----~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~ 891 (1078)
+++++... ...++||||+ +|+|.+++... ...+++.+++.++.||+.||+|||++ +|+||||||+|||++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~ 186 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN--AKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLN 186 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEE
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEe
Confidence 99998654 5589999999 99999999542 35699999999999999999999999 999999999999999
Q ss_pred --CCCcEEEecccccccccCCCC-------CceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccc
Q 039595 892 --LEFEAHVSDFGIAKFVEPYSS-------NRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSI 962 (1078)
Q Consensus 892 --~~~~~kl~DfG~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~ 962 (1078)
.++.+||+|||+++.+..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 187 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~ 266 (364)
T 3op5_A 187 YKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLK 266 (364)
T ss_dssp SSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT
T ss_pred cCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccccc
Confidence 889999999999987643221 12345699999999999999999999999999999999999999864322
Q ss_pred cccchhhhh----hhhhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHh
Q 039595 963 NFSSFSNMI----IEVNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHH 1021 (1078)
Q Consensus 963 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~ 1021 (1078)
+........ .......++.+.. .... .++.+++.+||+.||++||+++++++..
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~li~~cl~~~p~~RP~~~~l~~~l 324 (364)
T 3op5_A 267 DPKYVRDSKIRYRENIASLMDKCFPA--ANAP---GEIAKYMETVKLLDYTEKPLYENLRDIL 324 (364)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHSCT--TCCC---HHHHHHHHHHHTCCTTCCCCHHHHHHHH
T ss_pred CHHHHHHHHHHhhhhHHHHHHHhccc--ccCH---HHHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 211111110 1111122211110 1111 2577888999999999999999988753
No 244
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=2.1e-37 Score=350.65 Aligned_cols=259 Identities=20% Similarity=0.251 Sum_probs=177.6
Q ss_pred hhcCCCccc-eeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeec----
Q 039595 749 ATDDFDEKF-CIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSN---- 822 (1078)
Q Consensus 749 ~~~~~~~~~-~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~---- 822 (1078)
..++|++.+ .||+|+||+||+|..+ +|+.||||++... .....+....++.++||||+++++++..
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~ 97 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS--------PKARQEVDHHWQASGGPHIVCILDVYENMHHG 97 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc--------HHHHHHHHHHHHhcCCCChHHHHHHHhhccCC
Confidence 457888855 6999999999999765 7999999998543 1122223334567799999999999865
Q ss_pred CCeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCC---CCcEEEe
Q 039595 823 ARHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDL---EFEAHVS 899 (1078)
Q Consensus 823 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~kl~ 899 (1078)
+...++||||+++|+|.+++... ....+++.+++.++.|++.||+|||++ +|+||||||+||+++. ++.+||+
T Consensus 98 ~~~~~lv~e~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~ 173 (336)
T 3fhr_A 98 KRCLLIIMECMEGGELFSRIQER-GDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLT 173 (336)
T ss_dssp EEEEEEEEECCTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEEC
T ss_pred CceEEEEEeccCCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEe
Confidence 45689999999999999999653 235699999999999999999999999 9999999999999976 4559999
Q ss_pred cccccccccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcC
Q 039595 900 DFGIAKFVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILD 979 (1078)
Q Consensus 900 DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 979 (1078)
|||+++.... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||........ ..... ..+..
T Consensus 174 Dfg~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~--~~~~~ 247 (336)
T 3fhr_A 174 DFGFAKETTQ--NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAI--SPGMK--RRIRL 247 (336)
T ss_dssp CCTTCEEC------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------------
T ss_pred ccccceeccc--cccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhh--hhhHH--Hhhhc
Confidence 9999986543 223456789999999999888899999999999999999999999754332111 00000 00000
Q ss_pred CCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 980 PRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 980 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
.....+.+........+.+++.+||+.||++|||++|+++|+|+..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 293 (336)
T 3fhr_A 248 GQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQ 293 (336)
T ss_dssp ---CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHT
T ss_pred cccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccc
Confidence 1111111111112236788999999999999999999999999764
No 245
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=2.4e-37 Score=349.33 Aligned_cols=264 Identities=24% Similarity=0.337 Sum_probs=183.5
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHH-HHhcCCCCceeeEEeeeecCCeeE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVL-ALNEIRHRNIVKFHGFCSNARHSF 827 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~ 827 (1078)
.++|+..+.||+|+||.||+|..+ +|+.||||++.... ......++..|+. +++.++||||+++++++.+++..+
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~ 97 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV---DEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCW 97 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCC---CHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeeccc---CchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceE
Confidence 368999999999999999999764 78999999997542 2233445555555 778889999999999999999999
Q ss_pred EEEeecCCCCHHHHhcC--CCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccc
Q 039595 828 LVCEYLHRGSLARILGN--DATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAK 905 (1078)
Q Consensus 828 lv~E~~~~g~L~~~l~~--~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~ 905 (1078)
+||||+++ +|.+++.. ......+++..+..++.|++.||.|||+.. +|+||||||+||+++.++.+||+|||+++
T Consensus 98 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~ 174 (327)
T 3aln_A 98 ICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISG 174 (327)
T ss_dssp EEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSC
T ss_pred EEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCce
Confidence 99999986 88777742 112456899999999999999999999952 89999999999999999999999999998
Q ss_pred cccCCCCCceeecccccccccccc----ccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCC
Q 039595 906 FVEPYSSNRTEFVGTFGYAAPEIA----YTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPR 981 (1078)
Q Consensus 906 ~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 981 (1078)
...... ......||+.|+|||++ .+..++.++|||||||++|||++|+.||.............. ....+.
T Consensus 175 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~----~~~~~~ 249 (327)
T 3aln_A 175 QLVDSI-AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVV----KGDPPQ 249 (327)
T ss_dssp C-------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCC----CSCCCC
T ss_pred eccccc-ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHh----cCCCCC
Confidence 764322 23344799999999998 456789999999999999999999999764332111111100 001111
Q ss_pred CCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhhh
Q 039595 982 LSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYCD 1026 (1078)
Q Consensus 982 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~~ 1026 (1078)
+..... ......+.+++.+||+.||++|||++|+++|+|+...
T Consensus 250 ~~~~~~--~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 292 (327)
T 3aln_A 250 LSNSEE--REFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMY 292 (327)
T ss_dssp CCCCSS--CCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred CCCccc--ccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHh
Confidence 111100 1112367889999999999999999999999998754
No 246
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=2.1e-37 Score=349.64 Aligned_cols=269 Identities=21% Similarity=0.285 Sum_probs=202.9
Q ss_pred HhhcCCCccceeccCCceeEEEEEe--CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcC---CCCceeeEEeeee-
Q 039595 748 KATDDFDEKFCIGKGGQGSVYKAEL--PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEI---RHRNIVKFHGFCS- 821 (1078)
Q Consensus 748 ~~~~~~~~~~~lG~G~~g~V~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~- 821 (1078)
.+.++|++.+.||+|+||.||+|.. .+|+.||+|++....... .....+.+|+.+++.+ +||||+++++++.
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~ 85 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE--GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTV 85 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT--SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccc--cCCchhhHHHHHHHhhhccCCCCeEeeeeeeee
Confidence 3567899999999999999999976 467899999987543221 1122355666666555 8999999999986
Q ss_pred ----cCCeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEE
Q 039595 822 ----NARHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAH 897 (1078)
Q Consensus 822 ----~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~k 897 (1078)
.....++||||++ |+|.+++.... ...+++.+++.++.||+.||+|||++ ||+||||||+||+++.++.+|
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~k 160 (326)
T 1blx_A 86 SRTDRETKLTLVFEHVD-QDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIK 160 (326)
T ss_dssp EECSSEEEEEEEEECCS-CBHHHHHHHSC-TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEE
T ss_pred cccCCCceEEEEEecCC-CCHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEE
Confidence 5678899999998 59999985432 34589999999999999999999999 999999999999999999999
Q ss_pred EecccccccccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhh--
Q 039595 898 VSDFGIAKFVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVN-- 975 (1078)
Q Consensus 898 l~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~-- 975 (1078)
|+|||.++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...........
T Consensus 161 l~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~ 238 (326)
T 1blx_A 161 LADFGLARIYSFQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-DQLGKILDVIGLP 238 (326)
T ss_dssp ECSCCSCCCCCGG-GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCC
T ss_pred EecCcccccccCC-CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH-HHHHHHHHHcCCC
Confidence 9999999865432 2234567899999999999999999999999999999999999997643221 00101000000
Q ss_pred --h-----------hcCCCCCCCCC-ccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 976 --Q-----------ILDPRLSTPSP-GVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 976 --~-----------~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
. .+......... ........+.+++.+||+.||++|||++|+++|+|+..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~ 302 (326)
T 1blx_A 239 GEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD 302 (326)
T ss_dssp CGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTT
T ss_pred CcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccc
Confidence 0 00000000000 00111235778999999999999999999999999753
No 247
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.7e-37 Score=358.09 Aligned_cols=264 Identities=23% Similarity=0.262 Sum_probs=203.0
Q ss_pred hhcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCC-CC-----ceeeEEeeee
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIR-HR-----NIVKFHGFCS 821 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~l~~~~~ 821 (1078)
..++|++.+.||+|+||+||+|... +++.||||++... ......+..|+.+++.++ |+ +|+++++++.
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~ 126 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-----KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM 126 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-----HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-----HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeec
Confidence 4578999999999999999999654 6889999998643 233556777888887774 44 5999999999
Q ss_pred cCCeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeC--CCCcEEEe
Q 039595 822 NARHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLD--LEFEAHVS 899 (1078)
Q Consensus 822 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~--~~~~~kl~ 899 (1078)
..+..++||||+.+ +|.+++.... ...+++..+..++.|++.||.|||++ ..+|+||||||+||+++ .++.+||+
T Consensus 127 ~~~~~~lv~e~~~~-~L~~~l~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~ 203 (382)
T 2vx3_A 127 FRNHLCLVFEMLSY-NLYDLLRNTN-FRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIV 203 (382)
T ss_dssp ETTEEEEEEECCCC-BHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEEC
T ss_pred cCCceEEEEecCCC-CHHHHHhhcC-cCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEE
Confidence 99999999999965 9999985432 34589999999999999999999942 12899999999999995 47889999
Q ss_pred cccccccccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhh-----
Q 039595 900 DFGIAKFVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEV----- 974 (1078)
Q Consensus 900 DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~----- 974 (1078)
|||+++.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+...
T Consensus 204 DFG~a~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~--~~~~~i~~~~~~~~ 278 (382)
T 2vx3_A 204 DFGSSCQLGQ---RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEV--DQMNKIVEVLGIPP 278 (382)
T ss_dssp CCTTCEETTC---CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHHHCSCC
T ss_pred eccCceeccc---ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCC
Confidence 9999987643 234567899999999999999999999999999999999999997643221 111110000
Q ss_pred ----------hhhcCC----------------CCCCC-----------------------CCccHHHHHHHHHHHHhccc
Q 039595 975 ----------NQILDP----------------RLSTP-----------------------SPGVMDKLISIMEVAILCLD 1005 (1078)
Q Consensus 975 ----------~~~~~~----------------~~~~~-----------------------~~~~~~~~~~l~~li~~cl~ 1005 (1078)
...+.. ....+ ......+...+.+++.+||+
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~ 358 (382)
T 2vx3_A 279 AHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLD 358 (382)
T ss_dssp HHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcC
Confidence 000000 00000 00112233478899999999
Q ss_pred CCCCCCCChhHHHHHhhhhh
Q 039595 1006 ESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 1006 ~dP~~RPt~~ell~h~~~~~ 1025 (1078)
.||++|||++|+++|||+..
T Consensus 359 ~dP~~Rpta~e~L~hp~f~~ 378 (382)
T 2vx3_A 359 YDPKTRIQPYYALQHSFFKK 378 (382)
T ss_dssp SCTTTSCCHHHHTTSGGGCC
T ss_pred CChhhCCCHHHHhcCccccc
Confidence 99999999999999999864
No 248
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.7e-37 Score=347.67 Aligned_cols=262 Identities=21% Similarity=0.307 Sum_probs=196.0
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeee-------
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCS------- 821 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~------- 821 (1078)
.++|++.+.||+|+||.||+|... +++.||||++... .....+.+.+|+.++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 85 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT----DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLT 85 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC----SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCC
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC----ChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccc
Confidence 468999999999999999999765 5899999998643 3445678899999999999999999999873
Q ss_pred -------cCCeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeC-CC
Q 039595 822 -------NARHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLD-LE 893 (1078)
Q Consensus 822 -------~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~-~~ 893 (1078)
+....++||||++ |+|.+++.. +.+++..++.++.|++.||+|||++ +|+||||||+||+++ .+
T Consensus 86 ~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~ 157 (320)
T 2i6l_A 86 DDVGSLTELNSVYIVQEYME-TDLANVLEQ----GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTED 157 (320)
T ss_dssp C----CCSCSEEEEEEECCS-EEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTT
T ss_pred cccccccccCceeEEeeccC-CCHHHHhhc----CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCC
Confidence 4467899999998 599999942 4689999999999999999999999 999999999999997 56
Q ss_pred CcEEEecccccccccCCC---CCceeecccccccccccccc-CCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhh
Q 039595 894 FEAHVSDFGIAKFVEPYS---SNRTEFVGTFGYAAPEIAYT-MRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSN 969 (1078)
Q Consensus 894 ~~~kl~DfG~a~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~ 969 (1078)
+.+||+|||.++...... .......++..|+|||.+.+ ..++.++|||||||++|||++|+.||...... ....
T Consensus 158 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--~~~~ 235 (320)
T 2i6l_A 158 LVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHEL--EQMQ 235 (320)
T ss_dssp TEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHH
T ss_pred CeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHH--HHHH
Confidence 799999999998764321 12234567999999998865 67899999999999999999999997643321 1000
Q ss_pred hhhhh---------hhhc-------CCCCCCCCCcc----HHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 970 MIIEV---------NQIL-------DPRLSTPSPGV----MDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 970 ~~~~~---------~~~~-------~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
.+... .... ......+.... .....++.+++.+||+.||++|||++|+++|+|+..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 311 (320)
T 2i6l_A 236 LILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSI 311 (320)
T ss_dssp HHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHT
T ss_pred HHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCccccc
Confidence 00000 0000 00000000000 011236789999999999999999999999999764
No 249
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.9e-36 Score=359.26 Aligned_cols=302 Identities=24% Similarity=0.227 Sum_probs=190.3
Q ss_pred CCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCCCCcccCCCcccceeecccccccCccccccccccCCceeeec
Q 039595 223 SLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLDLIENQLSGSIPLSFGNLSSWTLMSLF 302 (1078)
Q Consensus 223 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 302 (1078)
+|+.|+|++|++++..|..|.++++|++|+|++|.+++..|..|+++++|++|+|++|++++..+..|.++++|+.|+++
T Consensus 33 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 112 (477)
T 2id5_A 33 ETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDIS 112 (477)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECT
T ss_pred CCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECC
Confidence 44444444444444444444444444444444444444444444444444444444444444333344444444444444
Q ss_pred ccCCCCCCCccccCCCccCeeeccccccCccCCCCCCCCCcCcEEEccCccCCCCCCccccccCCCCeEEcccccCcccc
Q 039595 303 SNSLSGSIPPILGNLKSLSTLGLYLNQLNGVIPPSIGNLSSLRNLSLFNNGLYGSIPEEIGYLKSLSELKLCKNNLSGVI 382 (1078)
Q Consensus 303 ~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 382 (1078)
+|.+++..|..|.++++|++|+|++|++++..+..|..+++|+.|++++|++++..+..+..+++|+.|+|++|.+.+..
T Consensus 113 ~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~ 192 (477)
T 2id5_A 113 ENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIR 192 (477)
T ss_dssp TSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEEC
T ss_pred CCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeC
Confidence 44444455556666777777777777777766777777777788888888777666666777888888888888887777
Q ss_pred CCCCccCCCCceeecccCcCCCCCCccccccCCCCeEEccCccccccchhhccCCCCCcEecCCCCccCCccCccccCCC
Q 039595 383 PHSVGNLTGLVLLNMCENHLFGPIPKSLKSLTSLKRVRFNQNNLVGKVYEAFGDHPNLTFLDLSQNNFDGKISFNWRNLP 462 (1078)
Q Consensus 383 p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 462 (1078)
+..|.++++|+.|++++|...+.+|.......+|++|++++|.+..+....|..+++|+.|+|++|.++++....
T Consensus 193 ~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~----- 267 (477)
T 2id5_A 193 DYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSM----- 267 (477)
T ss_dssp TTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTS-----
T ss_pred hhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhh-----
Confidence 777888888888888887776666665555567777777777777777777777777888888777776554444
Q ss_pred CCceecccccccCCCCCccccCCCcccEEeccCCccCCCcccccccCccCcEEeccCCccCCCcccccccccccceeecc
Q 039595 463 KLDTFIVSMNNIFGSIPLEIGDSSKLQFLDLSSNHIVGKIPVQLEKLFSLNKLILSLNQLSGSVPLEFGSLTELQYLDLS 542 (1078)
Q Consensus 463 ~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 542 (1078)
|..+++|++|+|++|++++..|..|.++++|+.|+|++|+|++..+..|..+++|++|+|+
T Consensus 268 -------------------~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 328 (477)
T 2id5_A 268 -------------------LHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILD 328 (477)
T ss_dssp -------------------CTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECC
T ss_pred -------------------ccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEcc
Confidence 4445555555666666655555566666666666666666665555566666666666666
Q ss_pred CccccC
Q 039595 543 ANKLSS 548 (1078)
Q Consensus 543 ~N~l~~ 548 (1078)
+|++..
T Consensus 329 ~N~l~c 334 (477)
T 2id5_A 329 SNPLAC 334 (477)
T ss_dssp SSCEEC
T ss_pred CCCccC
Confidence 666653
No 250
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=2.9e-37 Score=347.12 Aligned_cols=257 Identities=20% Similarity=0.284 Sum_probs=199.9
Q ss_pred hcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeee----cCC
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCS----NAR 824 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~----~~~ 824 (1078)
.++|++.+.||+|+||.||+|.. .+++.||||++... .....+.+.+|+.+++.++||||+++++++. ...
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH----EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKH 103 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES----SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC----CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCc
Confidence 46899999999999999999976 57999999998643 3455678899999999999999999999986 345
Q ss_pred eeEEEEeecCCCCHHHHhcCC-CCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccc
Q 039595 825 HSFLVCEYLHRGSLARILGND-ATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGI 903 (1078)
Q Consensus 825 ~~~lv~E~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~ 903 (1078)
..++||||+++|+|.+++... .....+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.
T Consensus 104 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~ 180 (317)
T 2buj_A 104 EAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGS 180 (317)
T ss_dssp EEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSS
T ss_pred eeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCc
Confidence 789999999999999998542 1245689999999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCCC---------ceeeccccccccccccccCC---CCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhh
Q 039595 904 AKFVEPYSSN---------RTEFVGTFGYAAPEIAYTMR---ATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMI 971 (1078)
Q Consensus 904 a~~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~---~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~ 971 (1078)
+......... .....||+.|+|||.+.+.. ++.++||||||+++|||++|+.||+.............
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~ 260 (317)
T 2buj_A 181 MNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAV 260 (317)
T ss_dssp CEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHH
T ss_pred chhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHh
Confidence 8765321111 12345799999999987554 68999999999999999999999753221111111111
Q ss_pred hhhhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhh
Q 039595 972 IEVNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHI 1022 (1078)
Q Consensus 972 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~ 1022 (1078)
.. .. ... ..... ...+.+++.+||+.||++|||++|++++..
T Consensus 261 ~~---~~--~~~-~~~~~---~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 302 (317)
T 2buj_A 261 QN---QL--SIP-QSPRH---SSALWQLLNSMMTVDPHQRPHIPLLLSQLE 302 (317)
T ss_dssp HC---C----CC-CCTTS---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred hc---cC--CCC-ccccC---CHHHHHHHHHHhhcChhhCCCHHHHHHHhh
Confidence 11 01 111 11111 236788999999999999999999998765
No 251
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=6.3e-37 Score=343.61 Aligned_cols=261 Identities=20% Similarity=0.298 Sum_probs=195.7
Q ss_pred HhhcCCCccceeccCCceeEEEEEeC----CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecC
Q 039595 748 KATDDFDEKFCIGKGGQGSVYKAELP----SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNA 823 (1078)
Q Consensus 748 ~~~~~~~~~~~lG~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 823 (1078)
...++|++.+.||+|+||.||+|... +++.||+|++..... .....+.+.+|+.++++++||||+++++++.+.
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 108 (313)
T 3brb_A 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS--SQREIEEFLSEAACMKDFSHPNVIRLLGVCIEM 108 (313)
T ss_dssp CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CC--CHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-
T ss_pred cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEecccc--chhHHHHHHHHHHHHhcCCCCCeeeeeEEEeec
Confidence 34578999999999999999999653 345899999875432 334467789999999999999999999999765
Q ss_pred C-----eeEEEEeecCCCCHHHHhcCC---CCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCc
Q 039595 824 R-----HSFLVCEYLHRGSLARILGND---ATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFE 895 (1078)
Q Consensus 824 ~-----~~~lv~E~~~~g~L~~~l~~~---~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~ 895 (1078)
. ..++||||+++|+|.+++... .....+++.+++.++.||+.||.|||++ +|+||||||+||+++.++.
T Consensus 109 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~ 185 (313)
T 3brb_A 109 SSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMT 185 (313)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSC
T ss_pred cccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCc
Confidence 4 359999999999999998432 2345699999999999999999999999 9999999999999999999
Q ss_pred EEEecccccccccCCC--CCceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccchhhhhh
Q 039595 896 AHVSDFGIAKFVEPYS--SNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSINFSSFSNMII 972 (1078)
Q Consensus 896 ~kl~DfG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~~~~~~~~~~ 972 (1078)
+||+|||+++...... .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... ......
T Consensus 186 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~- 262 (313)
T 3brb_A 186 VCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH--EMYDYL- 262 (313)
T ss_dssp EEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHH-
T ss_pred EEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH--HHHHHH-
Confidence 9999999998764432 12234567889999999999999999999999999999999 88897543221 111111
Q ss_pred hhhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhh
Q 039595 973 EVNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGY 1024 (1078)
Q Consensus 973 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~ 1024 (1078)
.....+... .... ..+.+++.+||+.||++|||+++++++.-..
T Consensus 263 --~~~~~~~~~---~~~~---~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l 306 (313)
T 3brb_A 263 --LHGHRLKQP---EDCL---DELYEIMYSCWRTDPLDRPTFSVLRLQLEKL 306 (313)
T ss_dssp --HTTCCCCCB---TTCC---HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred --HcCCCCCCC---cccc---HHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 111111111 1111 3578899999999999999999999886543
No 252
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=6.8e-37 Score=340.78 Aligned_cols=253 Identities=25% Similarity=0.378 Sum_probs=197.1
Q ss_pred cCCCccceeccCCceeEEEEEeCC----CCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeee-ecCCe
Q 039595 751 DDFDEKFCIGKGGQGSVYKAELPS----GDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFC-SNARH 825 (1078)
Q Consensus 751 ~~~~~~~~lG~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~ 825 (1078)
.+|++.+.||+|+||+||+|...+ +..||+|++... ......+.+.+|+.++++++||||+++++++ ..++.
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 101 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI---TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGS 101 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTC---CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSC
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccC---CCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCc
Confidence 568889999999999999997542 235899998753 2345567889999999999999999999985 55678
Q ss_pred eEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccc
Q 039595 826 SFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAK 905 (1078)
Q Consensus 826 ~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~ 905 (1078)
.++||||+++|+|.++++.. ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 102 ~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~ 176 (298)
T 3f66_A 102 PLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 176 (298)
T ss_dssp CEEEEECCTTCBHHHHHHCT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGC
T ss_pred eEEEEeCCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccc
Confidence 89999999999999999542 35689999999999999999999999 99999999999999999999999999998
Q ss_pred cccCCC----CCceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccchhhhhhhhhhhcCC
Q 039595 906 FVEPYS----SNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSINFSSFSNMIIEVNQILDP 980 (1078)
Q Consensus 906 ~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 980 (1078)
...... .......||+.|+|||.+.+..++.++||||+|+++|||++ |.+||..... .......... ..+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~--~~~~~~~~~~---~~~ 251 (298)
T 3f66_A 177 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT--FDITVYLLQG---RRL 251 (298)
T ss_dssp CCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCT--TTHHHHHHTT---CCC
T ss_pred cccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCH--HHHHHHHhcC---CCC
Confidence 664322 12344567889999999999999999999999999999999 5555432221 1111111111 111
Q ss_pred CCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhh
Q 039595 981 RLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHI 1022 (1078)
Q Consensus 981 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~ 1022 (1078)
.. ..... ..+.+++.+||+.||++|||++|+++..-
T Consensus 252 ~~---~~~~~---~~l~~li~~~l~~~p~~Rps~~ell~~L~ 287 (298)
T 3f66_A 252 LQ---PEYCP---DPLYEVMLKCWHPKAEMRPSFSELVSRIS 287 (298)
T ss_dssp CC---CTTCC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CC---CccCC---HHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11 11111 25778899999999999999999997643
No 253
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.6e-37 Score=346.83 Aligned_cols=253 Identities=24% Similarity=0.421 Sum_probs=195.9
Q ss_pred cCCCccceeccCCceeEEEEEeCC-----CCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCe
Q 039595 751 DDFDEKFCIGKGGQGSVYKAELPS-----GDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARH 825 (1078)
Q Consensus 751 ~~~~~~~~lG~G~~g~V~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 825 (1078)
.+|+..+.||+|+||+||+|.... +..||||++.... .......+.+|+.++++++||||+++++++.+.+.
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 120 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY---TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKP 120 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCC
Confidence 467788999999999999996542 2359999987542 33456678999999999999999999999999999
Q ss_pred eEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccc
Q 039595 826 SFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAK 905 (1078)
Q Consensus 826 ~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~ 905 (1078)
.++||||+++|+|.+++... ...+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||.++
T Consensus 121 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 195 (333)
T 1mqb_A 121 MMIITEYMENGALDKFLREK--DGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSR 195 (333)
T ss_dssp EEEEEECCTTEEHHHHHHHT--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred cEEEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcch
Confidence 99999999999999999542 34689999999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCCC---ceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccchhhhhhhhhhhcCCC
Q 039595 906 FVEPYSSN---RTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSINFSSFSNMIIEVNQILDPR 981 (1078)
Q Consensus 906 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 981 (1078)
........ .....+|+.|+|||.+.+..++.++|||||||++|||++ |+.||..... ...... ..... .
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~--~~~~~~---~~~~~--~ 268 (333)
T 1mqb_A 196 VLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN--HEVMKA---INDGF--R 268 (333)
T ss_dssp ---------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHHH---HHTTC--C
T ss_pred hhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH--HHHHHH---HHCCC--c
Confidence 76543221 223346789999999999999999999999999999999 9999753321 111111 11111 1
Q ss_pred CCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhh
Q 039595 982 LSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHI 1022 (1078)
Q Consensus 982 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~ 1022 (1078)
.. ..... ...+.+++.+||+.||++||+++|++++..
T Consensus 269 ~~-~~~~~---~~~l~~li~~~l~~~p~~Rps~~~l~~~L~ 305 (333)
T 1mqb_A 269 LP-TPMDC---PSAIYQLMMQCWQQERARRPKFADIVSILD 305 (333)
T ss_dssp CC-CCTTC---BHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred CC-CcccC---CHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11 11112 235778899999999999999999998754
No 254
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=7.1e-37 Score=349.31 Aligned_cols=257 Identities=22% Similarity=0.327 Sum_probs=199.7
Q ss_pred hcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCe---
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARH--- 825 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~--- 825 (1078)
.++|+..+.||+|+||.||+|.. .+|+.||||++.... ......+.+.+|+.+++.++||||+++++++.....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 100 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF--QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRN 100 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTT--SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGG
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccc--cchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccc
Confidence 36799999999999999999965 478999999997643 233446678899999999999999999999977654
Q ss_pred ---eEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccc
Q 039595 826 ---SFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFG 902 (1078)
Q Consensus 826 ---~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 902 (1078)
.++||||+. |+|.+++. ..+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 101 ~~~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg 171 (353)
T 3coi_A 101 FYDFYLVMPFMQ-TDLQKIMG-----LKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFG 171 (353)
T ss_dssp CCCCEEEEECCS-EEGGGTTT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTT
T ss_pred ceeEEEEecccc-CCHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecc
Confidence 499999997 58888772 2489999999999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCCceeecccccccccccccc-CCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhh--------
Q 039595 903 IAKFVEPYSSNRTEFVGTFGYAAPEIAYT-MRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIE-------- 973 (1078)
Q Consensus 903 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~-------- 973 (1078)
.++.... ......||+.|+|||.+.+ ..++.++||||+||++|||++|+.||...... .....+..
T Consensus 172 ~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--~~~~~i~~~~~~~~~~ 246 (353)
T 3coi_A 172 LARHADA---EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL--DQLTQILKVTGVPGTE 246 (353)
T ss_dssp CTTC-----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHH--HHHHHHHHHHCBCCHH
T ss_pred cccCCCC---CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCCHH
Confidence 9986543 2345678999999999887 67899999999999999999999997543211 11110000
Q ss_pred ------------hhhhc----CCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 974 ------------VNQIL----DPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 974 ------------~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
....+ .+.+....+ .....+.+++.+||+.||++|||++|+++|+|+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~ 311 (353)
T 3coi_A 247 FVQKLNDKAAKSYIQSLPQTPRKDFTQLFP---RASPQAADLLEKMLELDVDKRLTAAQALTHPFFEP 311 (353)
T ss_dssp HHTTCSCHHHHHHHHTSCBCSSCCTTTTCT---TSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTT
T ss_pred HHHHHhhHHHHHHHHhCcCCCCccHHHhcC---CcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhh
Confidence 00000 011111111 12336788999999999999999999999999763
No 255
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=6.8e-37 Score=358.55 Aligned_cols=257 Identities=23% Similarity=0.305 Sum_probs=191.3
Q ss_pred CCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcC-CCCceeeEEeeeecCCeeEEEE
Q 039595 752 DFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEI-RHRNIVKFHGFCSNARHSFLVC 830 (1078)
Q Consensus 752 ~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 830 (1078)
.|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+.+++++ +||||+++++++.+++..|+||
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~-------~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~ 88 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID-------FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIAL 88 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG-------GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH-------HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEE
Confidence 45556889999999998776678999999998643 244678899999876 8999999999999999999999
Q ss_pred eecCCCCHHHHhcCCCCCCc----CCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCC-------------
Q 039595 831 EYLHRGSLARILGNDATAKE----LSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLE------------- 893 (1078)
Q Consensus 831 E~~~~g~L~~~l~~~~~~~~----l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~------------- 893 (1078)
||+. |+|.+++........ .++..++.++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 89 E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~ 164 (434)
T 2rio_A 89 ELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAEN 164 (434)
T ss_dssp CCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCS
T ss_pred ecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCc
Confidence 9996 599999965432111 13445678999999999999999 99999999999999754
Q ss_pred CcEEEecccccccccCCCCC----ceeecccccccccccccc-------CCCCccchhHHHHHHHHHHHh-CCCCCCccc
Q 039595 894 FEAHVSDFGIAKFVEPYSSN----RTEFVGTFGYAAPEIAYT-------MRATEKYDVYSFGVLVFEVIK-GNHPRDFFS 961 (1078)
Q Consensus 894 ~~~kl~DfG~a~~~~~~~~~----~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwSlG~il~ellt-G~~p~~~~~ 961 (1078)
+.+||+|||+++........ .....||+.|+|||++.+ ..++.++|||||||++|||++ |+.||....
T Consensus 165 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~ 244 (434)
T 2rio_A 165 LRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 244 (434)
T ss_dssp CEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTT
T ss_pred eEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCch
Confidence 48999999999877543221 234579999999999875 678999999999999999999 999975322
Q ss_pred ccccchhhhhhhhhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhhh
Q 039595 962 INFSSFSNMIIEVNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYCD 1026 (1078)
Q Consensus 962 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~~ 1026 (1078)
... .. ........... ..........++.+++.+||+.||++|||++|+++|||+...
T Consensus 245 ~~~---~~---i~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~~ 302 (434)
T 2rio_A 245 SRE---SN---IIRGIFSLDEM-KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPK 302 (434)
T ss_dssp THH---HH---HHHTCCCCCCC-TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSCH
T ss_pred hhH---HH---HhcCCCCcccc-cccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccCCc
Confidence 110 11 11111111100 111122344578899999999999999999999999998643
No 256
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.8e-37 Score=347.15 Aligned_cols=254 Identities=20% Similarity=0.362 Sum_probs=194.5
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCE----EEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCC
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDI----VAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNAR 824 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 824 (1078)
.++|++.+.||+|+||+||+|.+. +++. ||+|.+.... .....+.+.+|+.++++++||||+++++++..+.
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 90 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---SPKANKEILDEAYVMASVDNPHVCRLLGICLTST 90 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS---SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc---CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC
Confidence 367999999999999999999754 4554 5667665432 3345678999999999999999999999998765
Q ss_pred eeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccc
Q 039595 825 HSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIA 904 (1078)
Q Consensus 825 ~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a 904 (1078)
.++|+||+.+|+|.+++... ...+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 91 -~~~v~~~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a 164 (327)
T 3lzb_A 91 -VQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLA 164 (327)
T ss_dssp -EEEEECCCSSCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC-
T ss_pred -ceEEEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcce
Confidence 78999999999999999543 34589999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCC--CceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccchhhhhhhhhhhcCCC
Q 039595 905 KFVEPYSS--NRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSINFSSFSNMIIEVNQILDPR 981 (1078)
Q Consensus 905 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 981 (1078)
+....... ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||+..... ........ ..
T Consensus 165 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~~~~~------~~ 236 (327)
T 3lzb_A 165 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILEK------GE 236 (327)
T ss_dssp ---------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHHT------TC
T ss_pred eEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHHHHHc------CC
Confidence 87644322 2234456889999999999999999999999999999999 99997643321 11111111 11
Q ss_pred CCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhh
Q 039595 982 LSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIG 1023 (1078)
Q Consensus 982 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~ 1023 (1078)
......... .++.+++.+||+.||++|||++|+++..-.
T Consensus 237 ~~~~~~~~~---~~l~~li~~~l~~dp~~Rps~~ell~~L~~ 275 (327)
T 3lzb_A 237 RLPQPPICT---IDVYMIMRKCWMIDADSRPKFRELIIEFSK 275 (327)
T ss_dssp CCCCCTTBC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCCCccCC---HHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 111111112 257789999999999999999999987543
No 257
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=2e-37 Score=371.69 Aligned_cols=269 Identities=24% Similarity=0.264 Sum_probs=207.5
Q ss_pred hcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeec------
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSN------ 822 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------ 822 (1078)
.++|++.+.||+|+||.||+|.. .+|+.||||++.... .....+.+.+|+.++++++||||+++++++..
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~---~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~ 89 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL---SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAP 89 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC---CHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCT
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC---CHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccC
Confidence 47899999999999999999965 468999999986542 34556779999999999999999999999765
Q ss_pred CCeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCc---EEEe
Q 039595 823 ARHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFE---AHVS 899 (1078)
Q Consensus 823 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~---~kl~ 899 (1078)
++..++||||+++|+|.+++........+++..++.++.|++.||+|||+. ||+||||||+||+++.++. +||+
T Consensus 90 ~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~ 166 (676)
T 3qa8_A 90 NDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKII 166 (676)
T ss_dssp TSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEEC
T ss_pred CCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEc
Confidence 678899999999999999997655555789999999999999999999999 9999999999999997765 9999
Q ss_pred cccccccccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccc---hhh-------
Q 039595 900 DFGIAKFVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSS---FSN------- 969 (1078)
Q Consensus 900 DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~---~~~------- 969 (1078)
|||.+....... ......||+.|+|||.+.+..++.++||||+||++|||++|+.||......... ...
T Consensus 167 DFG~a~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~ 245 (676)
T 3qa8_A 167 DLGYAKELDQGE-LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIV 245 (676)
T ss_dssp SCCCCCBTTSCC-CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CC
T ss_pred cccccccccccc-ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhh
Confidence 999998765432 334568999999999999999999999999999999999999997532111000 000
Q ss_pred --hhhhhhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 970 --MIIEVNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 970 --~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
........+......+..........+.+++.+||..||++|||++|+++|+|+..
T Consensus 246 ~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~ 303 (676)
T 3qa8_A 246 VYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQA 303 (676)
T ss_dssp SCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHH
T ss_pred hhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHH
Confidence 00000000111111111122233457889999999999999999999999999664
No 258
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=4.9e-37 Score=348.24 Aligned_cols=260 Identities=26% Similarity=0.340 Sum_probs=193.1
Q ss_pred hcCCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHH--HHHHhcCCCCceeeEEeeee-----c
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNV--VLALNEIRHRNIVKFHGFCS-----N 822 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e--~~~l~~l~h~niv~l~~~~~-----~ 822 (1078)
.++|++.+.||+|+||+||+|+. +++.||||++.... ...+..| +..+..++||||+++++++. .
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~-------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 83 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN-------RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADG 83 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG-------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTS
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc-------hhhHHHHHHHHHHHhccCcchhhheecccccccCC
Confidence 46899999999999999999976 58999999986432 3334444 44455689999999998542 3
Q ss_pred CCeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcC------CCCcEecCCCCCCeeeCCCCcE
Q 039595 823 ARHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDC------LPSIIHRDISSKNVLLDLEFEA 896 (1078)
Q Consensus 823 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~------~~~ivH~Dlk~~NIll~~~~~~ 896 (1078)
...+++||||+++|+|.+++.. ...++..++.++.||+.||+|||+.+ .++|+||||||+||+++.++.+
T Consensus 84 ~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 159 (336)
T 3g2f_A 84 RMEYLLVMEYYPNGSLXKYLSL----HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTC 159 (336)
T ss_dssp CEEEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCE
T ss_pred CceEEEEEecCCCCcHHHHHhh----cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcE
Confidence 3467899999999999999943 33588999999999999999999863 2389999999999999999999
Q ss_pred EEecccccccccCCC--------CCceeecccccccccccccc-------CCCCccchhHHHHHHHHHHHhCCCCCCccc
Q 039595 897 HVSDFGIAKFVEPYS--------SNRTEFVGTFGYAAPEIAYT-------MRATEKYDVYSFGVLVFEVIKGNHPRDFFS 961 (1078)
Q Consensus 897 kl~DfG~a~~~~~~~--------~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwSlG~il~elltG~~p~~~~~ 961 (1078)
||+|||+++...... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 160 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~ 239 (336)
T 3g2f_A 160 VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGE 239 (336)
T ss_dssp EECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTS
T ss_pred EEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCcc
Confidence 999999998764321 11234579999999999886 456789999999999999999977753221
Q ss_pred ccc--cchhh----------hh--hhhhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHh
Q 039595 962 INF--SSFSN----------MI--IEVNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHH 1021 (1078)
Q Consensus 962 ~~~--~~~~~----------~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~ 1021 (1078)
... ..... .. ........+.+.............+.+++.+||+.||++|||++|+++..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L 313 (336)
T 3g2f_A 240 SVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERM 313 (336)
T ss_dssp CCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred chhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHH
Confidence 110 00000 00 00111122333333333344555789999999999999999999998753
No 259
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=6.9e-37 Score=339.45 Aligned_cols=254 Identities=25% Similarity=0.344 Sum_probs=199.0
Q ss_pred hhcCCCccc-eeccCCceeEEEEEe---CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCC
Q 039595 749 ATDDFDEKF-CIGKGGQGSVYKAEL---PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNAR 824 (1078)
Q Consensus 749 ~~~~~~~~~-~lG~G~~g~V~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 824 (1078)
..++|++.+ .||+|+||+||+|.+ .+++.||||++.... ......+.+.+|+.+++.++||||+++++++ ..+
T Consensus 14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~ 90 (291)
T 1xbb_A 14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA--NDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAE 90 (291)
T ss_dssp CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-------CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESS
T ss_pred cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccc--cCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCC
Confidence 346788887 999999999999954 246789999997653 2234467899999999999999999999999 456
Q ss_pred eeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccc
Q 039595 825 HSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIA 904 (1078)
Q Consensus 825 ~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a 904 (1078)
..++||||+++|+|.+++.. ...+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 91 ~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 164 (291)
T 1xbb_A 91 SWMLVMEMAELGPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS 164 (291)
T ss_dssp SEEEEEECCTTEEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred CcEEEEEeCCCCCHHHHHHh---CcCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcc
Confidence 78999999999999999954 34589999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCCC---ceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccchhhhhhhhhhhcCC
Q 039595 905 KFVEPYSSN---RTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSINFSSFSNMIIEVNQILDP 980 (1078)
Q Consensus 905 ~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 980 (1078)
......... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... ...... .....+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~---~~~~~~ 239 (291)
T 1xbb_A 165 KALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTAML---EKGERM 239 (291)
T ss_dssp EECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHH---HTTCCC
T ss_pred eeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHH---HcCCCC
Confidence 876543322 122346788999999998889999999999999999999 99997643321 111111 111111
Q ss_pred CCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhh
Q 039595 981 RLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHI 1022 (1078)
Q Consensus 981 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~ 1022 (1078)
... ... ...+.+++.+||+.||++||+++|+++..-
T Consensus 240 ~~~---~~~---~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 275 (291)
T 1xbb_A 240 GCP---AGC---PREMYDLMNLCWTYDVENRPGFAAVELRLR 275 (291)
T ss_dssp CCC---TTC---CHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred CCC---CCC---CHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111 111 235778999999999999999999987654
No 260
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-36 Score=338.08 Aligned_cols=252 Identities=24% Similarity=0.351 Sum_probs=197.0
Q ss_pred CCCccceeccCCceeEEEEEeC-CC---CEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCee-
Q 039595 752 DFDEKFCIGKGGQGSVYKAELP-SG---DIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHS- 826 (1078)
Q Consensus 752 ~~~~~~~lG~G~~g~V~~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~- 826 (1078)
.|+..+.||+|+||+||+|.+. ++ ..||+|++.... .....+.+.+|+.++++++||||+++++++.+.+..
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT---EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLP 98 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC---SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCC
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccc---cHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCc
Confidence 4666789999999999999643 23 379999986532 344567889999999999999999999999766554
Q ss_pred EEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccc
Q 039595 827 FLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKF 906 (1078)
Q Consensus 827 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~ 906 (1078)
++||||+.+|+|.+++.. ....+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.++.
T Consensus 99 ~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 173 (298)
T 3pls_A 99 HVLLPYMCHGDLLQFIRS--PQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARD 173 (298)
T ss_dssp EEEECCCTTCBHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCT
T ss_pred EEEEecccCCCHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCccc
Confidence 999999999999999954 235688999999999999999999999 999999999999999999999999999986
Q ss_pred ccCC----CCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCC-CCcccccccchhhhhhhhhhhcCCC
Q 039595 907 VEPY----SSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP-RDFFSINFSSFSNMIIEVNQILDPR 981 (1078)
Q Consensus 907 ~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p-~~~~~~~~~~~~~~~~~~~~~~~~~ 981 (1078)
.... ........+|+.|+|||.+.+..++.++||||||+++|||++|..| |..... ......... .....
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~--~~~~~~~~~---~~~~~ 248 (298)
T 3pls_A 174 ILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP--FDLTHFLAQ---GRRLP 248 (298)
T ss_dssp TTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG--GGHHHHHHT---TCCCC
T ss_pred ccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH--HHHHHHhhc---CCCCC
Confidence 5332 1223345678999999999999999999999999999999996555 332211 111111111 11111
Q ss_pred CCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhh
Q 039595 982 LSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHI 1022 (1078)
Q Consensus 982 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~ 1022 (1078)
. ..... ..+.+++.+||+.||.+|||++++++..-
T Consensus 249 ~---~~~~~---~~l~~li~~~l~~~p~~Rps~~~ll~~l~ 283 (298)
T 3pls_A 249 Q---PEYCP---DSLYQVMQQCWEADPAVRPTFRVLVGEVE 283 (298)
T ss_dssp C---CTTCC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred C---Cccch---HHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1 11111 25778999999999999999999987643
No 261
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.5e-37 Score=348.68 Aligned_cols=253 Identities=22% Similarity=0.286 Sum_probs=185.7
Q ss_pred hcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCC-CCceeeEEeee-------
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIR-HRNIVKFHGFC------- 820 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~------- 820 (1078)
..+|++.+.||+|+||.||+|.. .+++.||||++... .....+.+.+|+.+++++. ||||+++++++
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~ 102 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN----EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEES 102 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES----SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC----chHHHHHHHHHHHHHHHhccCCChhhcccccccccccc
Confidence 45899999999999999999975 47899999998543 3445667889999999996 99999999998
Q ss_pred -ecCCeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCC--cEecCCCCCCeeeCCCCcEE
Q 039595 821 -SNARHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPS--IIHRDISSKNVLLDLEFEAH 897 (1078)
Q Consensus 821 -~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlk~~NIll~~~~~~k 897 (1078)
......++||||+. |+|.+++........+++.+++.++.||+.||+|||++ + |+||||||+||+++.++.+|
T Consensus 103 ~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~k 178 (337)
T 3ll6_A 103 DTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIK 178 (337)
T ss_dssp TTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEE
T ss_pred ccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEE
Confidence 34456899999996 69999886544456799999999999999999999998 8 99999999999999999999
Q ss_pred EecccccccccCCCCC------------ceeecccccccccccc---ccCCCCccchhHHHHHHHHHHHhCCCCCCcccc
Q 039595 898 VSDFGIAKFVEPYSSN------------RTEFVGTFGYAAPEIA---YTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSI 962 (1078)
Q Consensus 898 l~DfG~a~~~~~~~~~------------~~~~~gt~~y~aPE~~---~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~ 962 (1078)
|+|||+++........ .....||+.|+|||++ .+..++.++|||||||++|||++|+.||.....
T Consensus 179 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~ 258 (337)
T 3ll6_A 179 LCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK 258 (337)
T ss_dssp BCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----
T ss_pred EecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhH
Confidence 9999999876543221 1245689999999998 566789999999999999999999999753221
Q ss_pred cccchhhhhhhhhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhh
Q 039595 963 NFSSFSNMIIEVNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGY 1024 (1078)
Q Consensus 963 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~ 1024 (1078)
. .. .......... .... ..+.+++.+||+.||++|||++|++++.+..
T Consensus 259 ~--~~------~~~~~~~~~~---~~~~---~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~ 306 (337)
T 3ll6_A 259 L--RI------VNGKYSIPPH---DTQY---TVFHSLIRAMLQVNPEERLSIAEVVHQLQEI 306 (337)
T ss_dssp ---------------CCCCTT---CCSS---GGGHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred H--Hh------hcCcccCCcc---cccc---hHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 1 00 0000110111 1111 1366889999999999999999999987643
No 262
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1.3e-37 Score=349.97 Aligned_cols=254 Identities=22% Similarity=0.290 Sum_probs=204.5
Q ss_pred HHhhcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCC--hhhHHHHHHHHHHHhcCC--CCceeeEEeeee
Q 039595 747 IKATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGN--MADQDEFLNVVLALNEIR--HRNIVKFHGFCS 821 (1078)
Q Consensus 747 ~~~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~--~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~ 821 (1078)
....++|++.+.||+|+||.||+|.. .+++.||||++........ ....+.+.+|+.++++++ ||||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 34567899999999999999999965 5789999999976543211 012234667889999986 599999999999
Q ss_pred cCCeeEEEEeecCC-CCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeC-CCCcEEEe
Q 039595 822 NARHSFLVCEYLHR-GSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLD-LEFEAHVS 899 (1078)
Q Consensus 822 ~~~~~~lv~E~~~~-g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~-~~~~~kl~ 899 (1078)
.++..++|+||+.+ ++|.+++.. ...+++..++.++.||+.||+|||++ +|+||||||+||+++ .++.+||+
T Consensus 119 ~~~~~~lv~e~~~~~~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~ 192 (320)
T 3a99_A 119 RPDSFVLILERPEPVQDLFDFITE---RGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLI 192 (320)
T ss_dssp CSSEEEEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEEC
T ss_pred cCCcEEEEEEcCCCCccHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEe
Confidence 99999999999986 899999843 35689999999999999999999999 999999999999999 78999999
Q ss_pred cccccccccCCCCCceeeccccccccccccccCCC-CccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhc
Q 039595 900 DFGIAKFVEPYSSNRTEFVGTFGYAAPEIAYTMRA-TEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQIL 978 (1078)
Q Consensus 900 DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 978 (1078)
|||+++..... ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||..... .......
T Consensus 193 Dfg~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--------~~~~~~~- 261 (320)
T 3a99_A 193 DFGSGALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--------IIRGQVF- 261 (320)
T ss_dssp CCTTCEECCSS--CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--------HHHCCCC-
T ss_pred eCccccccccc--cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh--------hhccccc-
Confidence 99999876532 2345679999999999887665 7889999999999999999999753211 0110001
Q ss_pred CCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhhh
Q 039595 979 DPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYCD 1026 (1078)
Q Consensus 979 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~~ 1026 (1078)
.. .... .++.+++.+||+.||++|||++|+++|+|+...
T Consensus 262 ---~~---~~~~---~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~ 300 (320)
T 3a99_A 262 ---FR---QRVS---SECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 300 (320)
T ss_dssp ---CS---SCCC---HHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSC
T ss_pred ---cc---ccCC---HHHHHHHHHHccCChhhCcCHHHHhcCHhhcCc
Confidence 11 1111 257789999999999999999999999997653
No 263
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=7.4e-37 Score=343.90 Aligned_cols=260 Identities=22% Similarity=0.305 Sum_probs=186.3
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
.++|+..+.||+|+||.||+|... +|+.||||++..... .....+.+.++..+++.++||||+++++++.+++..++
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~l 101 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGN--KEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFI 101 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSC--HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEeccccc--chHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEE
Confidence 468999999999999999999764 799999999976431 12223445556667888899999999999999999999
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHh-cCCCCcEecCCCCCCeeeCCCCcEEEecccccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHH-DCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFV 907 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~ 907 (1078)
||||+ ++.+..+... ....+++..++.++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||.+...
T Consensus 102 v~e~~-~~~~~~l~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 175 (318)
T 2dyl_A 102 AMELM-GTCAEKLKKR--MQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRL 175 (318)
T ss_dssp EECCC-SEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC---
T ss_pred EEecc-CCcHHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhc
Confidence 99999 5566655532 23568999999999999999999998 5 8999999999999999999999999999766
Q ss_pred cCCCCCceeeccccccccccccc-----cCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCC
Q 039595 908 EPYSSNRTEFVGTFGYAAPEIAY-----TMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRL 982 (1078)
Q Consensus 908 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 982 (1078)
... .......|++.|+|||++. ...++.++|||||||++|||++|+.||............ ......+..
T Consensus 176 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~----~~~~~~~~~ 250 (318)
T 2dyl_A 176 VDD-KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTK----VLQEEPPLL 250 (318)
T ss_dssp ------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHH----HHHSCCCCC
T ss_pred cCC-ccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHH----HhccCCCCC
Confidence 442 2234457999999999984 456889999999999999999999997643322111111 111111111
Q ss_pred CCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhhh
Q 039595 983 STPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYCD 1026 (1078)
Q Consensus 983 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~~ 1026 (1078)
.. .... ...+.+++.+||+.||.+|||++|+++|+|+...
T Consensus 251 ~~-~~~~---~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (318)
T 2dyl_A 251 PG-HMGF---SGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRY 290 (318)
T ss_dssp CS-SSCC---CHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHH
T ss_pred Cc-cCCC---CHHHHHHHHHHccCChhHCcCHHHHhhCHHHHhc
Confidence 11 1111 2257788999999999999999999999997643
No 264
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=4.3e-37 Score=352.71 Aligned_cols=247 Identities=15% Similarity=0.108 Sum_probs=195.6
Q ss_pred hhcCCCccceeccCCceeEEEEE------eCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCC---CCceeeEEee
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAE------LPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIR---HRNIVKFHGF 819 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~------~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~ 819 (1078)
..++|++.+.||+|+||+||+|. ..+++.||||++... ...++..|+.++++++ |+||++++++
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-------~~~~~~~e~~~~~~l~~~~~~~iv~~~~~ 135 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-------NPWEFYIGTQLMERLKPSMQHMFMKFYSA 135 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC-------CHHHHHHHHHHHHHSCGGGGGGBCCEEEE
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-------ChhHHHHHHHHHHHhhhhhhhhhhhhhee
Confidence 34679999999999999999993 446889999998653 2456777788877776 9999999999
Q ss_pred eecCCeeEEEEeecCCCCHHHHhcCC--CCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCC-----
Q 039595 820 CSNARHSFLVCEYLHRGSLARILGND--ATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDL----- 892 (1078)
Q Consensus 820 ~~~~~~~~lv~E~~~~g~L~~~l~~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~----- 892 (1078)
+..++..|+||||+++|+|.+++... .....+++.+++.++.||+.||+|||++ +|+||||||+|||++.
T Consensus 136 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~ 212 (365)
T 3e7e_A 136 HLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQ 212 (365)
T ss_dssp EECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC
T ss_pred eecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCc
Confidence 99999999999999999999999532 1345699999999999999999999999 9999999999999998
Q ss_pred ------CCcEEEecccccccccCC--CCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccc
Q 039595 893 ------EFEAHVSDFGIAKFVEPY--SSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINF 964 (1078)
Q Consensus 893 ------~~~~kl~DfG~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~ 964 (1078)
++.+||+|||+|+..... .......+||+.|||||++.+..++.++|||||||++|||+||+.||.......
T Consensus 213 ~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~ 292 (365)
T 3e7e_A 213 DDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE 292 (365)
T ss_dssp ------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE
T ss_pred cccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc
Confidence 899999999999765432 223345679999999999999999999999999999999999999964222110
Q ss_pred cchhhhhhhhhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHh
Q 039595 965 SSFSNMIIEVNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHH 1021 (1078)
Q Consensus 965 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~ 1021 (1078)
. .....+... ...+ .+.+++.+|++.+|.+|++..+.+.+.
T Consensus 293 ~-----------~~~~~~~~~--~~~~---~~~~~~~~~l~~~p~~r~~~~~~l~~~ 333 (365)
T 3e7e_A 293 C-----------KPEGLFRRL--PHLD---MWNEFFHVMLNIPDCHHLPSLDLLRQK 333 (365)
T ss_dssp E-----------EECSCCTTC--SSHH---HHHHHHHHHHCCCCTTCCCCHHHHHHH
T ss_pred e-----------eechhcccc--CcHH---HHHHHHHHHcCCCCCCcchHHHHHHHH
Confidence 0 011111111 1122 455777889999999997655444443
No 265
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.7e-37 Score=358.68 Aligned_cols=255 Identities=22% Similarity=0.284 Sum_probs=191.5
Q ss_pred hcCCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcC-CCCceeeEEeeeecCCeeEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEI-RHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 828 (1078)
..+|+..+.||+|+||+||.....+++.||||++..... ..+.+|+.+++++ +|||||++++++.+....|+
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~-------~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~l 95 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF-------SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYI 95 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE-------EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEE
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH-------HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEE
Confidence 356889999999999997766556799999999865422 1245789999999 89999999999999999999
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCC-----CCcEEEecccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDL-----EFEAHVSDFGI 903 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~-----~~~~kl~DfG~ 903 (1078)
||||+. |+|.+++.... ....+.+++.++.||+.||+|||++ +|+||||||+||+++. ...+||+|||+
T Consensus 96 v~E~~~-g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~ 169 (432)
T 3p23_A 96 AIELCA-ATLQEYVEQKD--FAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGL 169 (432)
T ss_dssp EEECCS-EEHHHHHHSSS--CCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTE
T ss_pred EEECCC-CCHHHHHHhcC--CCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccc
Confidence 999996 59999996432 2344556788999999999999999 9999999999999953 23688999999
Q ss_pred cccccCCC---CCceeeccccccccccccc---cCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccchhhhhhhhhh
Q 039595 904 AKFVEPYS---SNRTEFVGTFGYAAPEIAY---TMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSINFSSFSNMIIEVNQ 976 (1078)
Q Consensus 904 a~~~~~~~---~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 976 (1078)
++...... .......||+.|+|||++. ...++.++||||+||++|||++ |+.||...... ... .
T Consensus 170 a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~------~~~---~ 240 (432)
T 3p23_A 170 CKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR------QAN---I 240 (432)
T ss_dssp EECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH------HHH---H
T ss_pred eeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH------HHH---H
Confidence 98765432 2234567999999999987 4567889999999999999999 89996422111 000 1
Q ss_pred hcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhhh
Q 039595 977 ILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYCD 1026 (1078)
Q Consensus 977 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~~ 1026 (1078)
...................+.+++.+||+.||++|||++|+++|||+...
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~~ 290 (432)
T 3p23_A 241 LLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSL 290 (432)
T ss_dssp HTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCCH
T ss_pred HhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccCh
Confidence 11111111111112233457789999999999999999999999998653
No 266
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=2.8e-37 Score=371.05 Aligned_cols=252 Identities=25% Similarity=0.412 Sum_probs=202.2
Q ss_pred hhcCCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEE
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 828 (1078)
..++|++.+.||+|+||.||+|.++.+..||||+++... ...+.|.+|+.++++++||||+++++++.+ ...++
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~l 338 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-----MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYI 338 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-----SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-----CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceE
Confidence 456788999999999999999998878889999997542 235679999999999999999999999976 67899
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVE 908 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~ 908 (1078)
||||+++|+|.++++.. ....+++.+++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 339 v~e~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 414 (535)
T 2h8h_A 339 VTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIE 414 (535)
T ss_dssp EECCCTTEEHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCC
T ss_pred eeehhcCCcHHHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecC
Confidence 99999999999999432 234589999999999999999999999 99999999999999999999999999998664
Q ss_pred CCC-CCceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccchhhhhhhhhhhcCCCCCCCC
Q 039595 909 PYS-SNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPS 986 (1078)
Q Consensus 909 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 986 (1078)
... .......++..|+|||++.+..++.++|||||||++|||++ |+.||..... ......+ ........ .
T Consensus 415 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~--~~~~~~i---~~~~~~~~---~ 486 (535)
T 2h8h_A 415 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQV---ERGYRMPC---P 486 (535)
T ss_dssp CHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH--HHHHHHH---HTTCCCCC---C
T ss_pred CCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHH---HcCCCCCC---C
Confidence 311 11223456789999999999999999999999999999999 9999753321 1111111 11111111 1
Q ss_pred CccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHh
Q 039595 987 PGVMDKLISIMEVAILCLDESPEARPTMEKGFGHH 1021 (1078)
Q Consensus 987 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~ 1021 (1078)
.... ..+.+++.+||+.||++|||++++++..
T Consensus 487 ~~~~---~~l~~li~~cl~~dP~~RPt~~~l~~~L 518 (535)
T 2h8h_A 487 PECP---ESLHDLMCQCWRKEPEERPTFEYLQAFL 518 (535)
T ss_dssp TTCC---HHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCC---HHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 1122 2577889999999999999999988754
No 267
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.7e-37 Score=354.16 Aligned_cols=258 Identities=17% Similarity=0.192 Sum_probs=199.5
Q ss_pred hcCCCccceeccCCceeEEEEEeCC---------CCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceee-----
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELPS---------GDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVK----- 815 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~----- 815 (1078)
.++|++.+.||+|+||.||+|.... ++.||||++... +.+.+|+.++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~---------~~~~~E~~~l~~l~h~niv~~~~~~ 111 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD---------GRLFNEQNFFQRAAKPLQVNKWKKL 111 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT---------STHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc---------chHHHHHHHHHHhcccchhhhhhhh
Confidence 3689999999999999999997653 789999998643 24778999999999999988
Q ss_pred ----------EEeeeec-CCeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCC
Q 039595 816 ----------FHGFCSN-ARHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDIS 884 (1078)
Q Consensus 816 ----------l~~~~~~-~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 884 (1078)
+++++.. +...++||||+ +|+|.+++... ....+++.+++.++.||+.||+|||++ +|+|||||
T Consensus 112 ~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dik 186 (352)
T 2jii_A 112 YSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS-PKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVT 186 (352)
T ss_dssp TTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCC
T ss_pred ccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhC-CcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCC
Confidence 5667655 78899999999 99999999543 235799999999999999999999999 99999999
Q ss_pred CCCeeeCCCC--cEEEecccccccccCCCC-------CceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCC
Q 039595 885 SKNVLLDLEF--EAHVSDFGIAKFVEPYSS-------NRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNH 955 (1078)
Q Consensus 885 ~~NIll~~~~--~~kl~DfG~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~ 955 (1078)
|+||+++.++ .+||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 187 p~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~ 266 (352)
T 2jii_A 187 AENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFL 266 (352)
T ss_dssp GGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCC
Confidence 9999999998 999999999987643221 1234579999999999999999999999999999999999999
Q ss_pred CCCcccccccchhhhhhhhhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhh
Q 039595 956 PRDFFSINFSSFSNMIIEVNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHI 1022 (1078)
Q Consensus 956 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~ 1022 (1078)
||.................... .+.+.............+.+++.+||+.||++|||++++++...
T Consensus 267 pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 332 (352)
T 2jii_A 267 PWTNCLPNTEDIMKQKQKFVDK-PGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLE 332 (352)
T ss_dssp TTGGGTTCHHHHHHHHHHHHHS-CCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred CcccCCcCHHHHHHHHHhccCC-hhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHH
Confidence 9765432222222221111111 11111111111111236788899999999999999999987643
No 268
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=9.5e-37 Score=335.93 Aligned_cols=248 Identities=26% Similarity=0.388 Sum_probs=192.2
Q ss_pred hcCCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeec-CCeeEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSN-ARHSFL 828 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~l 828 (1078)
.++|++.+.||+|+||.||+|+.+ |+.||||++... ...+.+.+|+.++++++||||+++++++.+ .+..++
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~l 92 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND------ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 92 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC------C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEE
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecch------hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEE
Confidence 468999999999999999999875 889999998643 235678999999999999999999998754 457899
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccccccc
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVE 908 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~ 908 (1078)
||||+++|+|.+++... ....+++..++.++.|++.||+|||++ +++||||||+||+++.++.+||+|||++....
T Consensus 93 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 168 (278)
T 1byg_A 93 VTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 168 (278)
T ss_dssp EECCCTTEEHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-----
T ss_pred EEecCCCCCHHHHHHhc-ccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccccc
Confidence 99999999999999432 223378999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccchhhhhhhhhhhcCCCCCCCCC
Q 039595 909 PYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSP 987 (1078)
Q Consensus 909 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 987 (1078)
.. .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... ..... .......+... .
T Consensus 169 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~--~~~~~---~~~~~~~~~~~---~ 237 (278)
T 1byg_A 169 ST---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KDVVP---RVEKGYKMDAP---D 237 (278)
T ss_dssp ----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG--GGHHH---HHTTTCCCCCC---T
T ss_pred cc---ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH--HHHHH---HHhcCCCCCCc---c
Confidence 32 233467889999999999999999999999999999998 9999754322 11111 11111111111 1
Q ss_pred ccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhh
Q 039595 988 GVMDKLISIMEVAILCLDESPEARPTMEKGFGHHI 1022 (1078)
Q Consensus 988 ~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~ 1022 (1078)
.. ...+.+++.+||+.||++|||++|+++...
T Consensus 238 ~~---~~~l~~li~~~l~~~p~~Rps~~~l~~~L~ 269 (278)
T 1byg_A 238 GC---PPAVYEVMKNCWHLDAAMRPSFLQLREQLE 269 (278)
T ss_dssp TC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cC---CHHHHHHHHHHhcCChhhCCCHHHHHHHHH
Confidence 11 235778899999999999999999987654
No 269
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.4e-36 Score=370.23 Aligned_cols=250 Identities=22% Similarity=0.304 Sum_probs=194.4
Q ss_pred CCCccc-eeccCCceeEEEEEeC---CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeE
Q 039595 752 DFDEKF-CIGKGGQGSVYKAELP---SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSF 827 (1078)
Q Consensus 752 ~~~~~~-~lG~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 827 (1078)
++.+.. .||+|+||.||+|.++ ++..||||+++... .....+.+.+|+.++++++|||||++++++.. +..+
T Consensus 336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~ 411 (613)
T 2ozo_A 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT---EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALM 411 (613)
T ss_dssp SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC---SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEE
T ss_pred ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC---ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeE
Confidence 344444 7999999999999653 45679999997642 23456789999999999999999999999976 5689
Q ss_pred EEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccccc
Q 039595 828 LVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFV 907 (1078)
Q Consensus 828 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~ 907 (1078)
+||||+++|+|.+++... ...+++.+++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 412 lv~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~ 486 (613)
T 2ozo_A 412 LVMEMAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKAL 486 (613)
T ss_dssp EEEECCTTCBHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTC
T ss_pred EEEEeCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccc
Confidence 999999999999999542 45689999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCC---ceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccchhhhhhhhhhhcCCCCC
Q 039595 908 EPYSSN---RTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSINFSSFSNMIIEVNQILDPRLS 983 (1078)
Q Consensus 908 ~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 983 (1078)
...... .....+++.|+|||++.+..++.++|||||||++|||++ |+.||..... ......+.. ......
T Consensus 487 ~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~--~~~~~~i~~---~~~~~~- 560 (613)
T 2ozo_A 487 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--PEVMAFIEQ---GKRMEC- 560 (613)
T ss_dssp C--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS--HHHHHHHHT---TCCCCC-
T ss_pred cCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH--HHHHHHHHc---CCCCCC-
Confidence 432221 223345789999999999999999999999999999998 9999764332 111111111 111111
Q ss_pred CCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHh
Q 039595 984 TPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHH 1021 (1078)
Q Consensus 984 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~ 1021 (1078)
..... ..+.+++.+||+.||++||+++++++..
T Consensus 561 --p~~~~---~~l~~li~~cl~~dP~~RPs~~~l~~~L 593 (613)
T 2ozo_A 561 --PPECP---PELYALMSDCWIYKWEDRPDFLTVEQRM 593 (613)
T ss_dssp --CTTCC---HHHHHHHHHTTCSSTTTSCCHHHHHHHH
T ss_pred --CCcCC---HHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 11122 3577889999999999999999987653
No 270
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=7.5e-37 Score=352.15 Aligned_cols=264 Identities=20% Similarity=0.225 Sum_probs=201.9
Q ss_pred hcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCC-----------CCceeeEE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIR-----------HRNIVKFH 817 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~l~ 817 (1078)
.++|++.+.||+|+||+||+|.. .+++.||||++... ....+.+.+|+.++++++ ||||++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~ 92 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-----KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLL 92 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCC
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-----ccchhhhhHHHHHHHHhhcccccchhccccchHHHHH
Confidence 36899999999999999999975 57899999998643 334567888999888876 89999999
Q ss_pred eeeecCC----eeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeC--
Q 039595 818 GFCSNAR----HSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLD-- 891 (1078)
Q Consensus 818 ~~~~~~~----~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~-- 891 (1078)
+++...+ ..++||||+ +++|.+++.... ...+++..++.++.||+.||+|||+++ +|+||||||+||+++
T Consensus 93 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~ 168 (373)
T 1q8y_A 93 DHFNHKGPNGVHVVMVFEVL-GENLLALIKKYE-HRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIV 168 (373)
T ss_dssp EEEEEEETTEEEEEEEECCC-CEEHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEE
T ss_pred HHhhccCCCCceEEEEEecC-CCCHHHHHHHhh-ccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEecc
Confidence 9987544 789999999 889999995432 345899999999999999999999953 899999999999994
Q ss_pred ----CCCcEEEecccccccccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccc-cc
Q 039595 892 ----LEFEAHVSDFGIAKFVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINF-SS 966 (1078)
Q Consensus 892 ----~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~-~~ 966 (1078)
..+.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..
T Consensus 169 ~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~ 245 (373)
T 1q8y_A 169 DSPENLIQIKIADLGNACWYDEH---YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTK 245 (373)
T ss_dssp ETTTTEEEEEECCCTTCEETTBC---CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------C
T ss_pred CCCcCcceEEEcccccccccCCC---CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCC
Confidence 4458999999999876542 334578999999999999999999999999999999999999986433210 00
Q ss_pred hhhhhhhhhhhcC------------------C-----CCCC------------CCCccHHHHHHHHHHHHhcccCCCCCC
Q 039595 967 FSNMIIEVNQILD------------------P-----RLST------------PSPGVMDKLISIMEVAILCLDESPEAR 1011 (1078)
Q Consensus 967 ~~~~~~~~~~~~~------------------~-----~~~~------------~~~~~~~~~~~l~~li~~cl~~dP~~R 1011 (1078)
............. . .... ...........+.+++.+||+.||++|
T Consensus 246 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 325 (373)
T 1q8y_A 246 DDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKR 325 (373)
T ss_dssp HHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTC
T ss_pred hHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCcccc
Confidence 0000000000000 0 0000 001113445578899999999999999
Q ss_pred CChhHHHHHhhhhh
Q 039595 1012 PTMEKGFGHHIGYC 1025 (1078)
Q Consensus 1012 Pt~~ell~h~~~~~ 1025 (1078)
||++|+++|+|+..
T Consensus 326 pt~~ell~hp~f~~ 339 (373)
T 1q8y_A 326 ADAGGLVNHPWLKD 339 (373)
T ss_dssp BCHHHHHTCGGGTT
T ss_pred CCHHHHhhChhhhc
Confidence 99999999999764
No 271
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.3e-36 Score=347.58 Aligned_cols=262 Identities=19% Similarity=0.237 Sum_probs=203.6
Q ss_pred hcCCCccceeccCCceeEEEEEeC-CC-CEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCc------eeeEEeeee
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP-SG-DIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRN------IVKFHGFCS 821 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~~~~~ 821 (1078)
.++|++.+.||+|+||+||+|... ++ +.||+|+++.. ....+.+.+|+.++++++|++ ++.+++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~ 92 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-----GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFN 92 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-----ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeee
Confidence 468999999999999999999764 44 68999998643 234567888999999987766 999999999
Q ss_pred cCCeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeee-----------
Q 039595 822 NARHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLL----------- 890 (1078)
Q Consensus 822 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll----------- 890 (1078)
..+..++||||+ ++++.+++... ....+++.+++.++.||+.||+|||++ +|+||||||+||++
T Consensus 93 ~~~~~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~ 167 (355)
T 2eu9_A 93 FHGHMCIAFELL-GKNTFEFLKEN-NFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNE 167 (355)
T ss_dssp ETTEEEEEEECC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECC
T ss_pred eCCeEEEEEecc-CCChHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccc
Confidence 999999999999 56777776432 234689999999999999999999999 99999999999999
Q ss_pred --------CCCCcEEEecccccccccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccc
Q 039595 891 --------DLEFEAHVSDFGIAKFVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSI 962 (1078)
Q Consensus 891 --------~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~ 962 (1078)
+.++.+||+|||.++.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 168 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 244 (355)
T 2eu9_A 168 HKSCEEKSVKNTSIRVADFGSATFDHE---HHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHEN 244 (355)
T ss_dssp C-CCCEEEESCCCEEECCCTTCEETTS---CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred cccccccccCCCcEEEeecCccccccc---cccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCH
Confidence 5678999999999986543 23456799999999999999999999999999999999999999764332
Q ss_pred cccchhhhhhhhhh---------------hcC-------------------CCCCCCCCccHHHHHHHHHHHHhcccCCC
Q 039595 963 NFSSFSNMIIEVNQ---------------ILD-------------------PRLSTPSPGVMDKLISIMEVAILCLDESP 1008 (1078)
Q Consensus 963 ~~~~~~~~~~~~~~---------------~~~-------------------~~~~~~~~~~~~~~~~l~~li~~cl~~dP 1008 (1078)
.. ....+..... ... +...............+.+++.+||+.||
T Consensus 245 ~~--~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP 322 (355)
T 2eu9_A 245 RE--HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDP 322 (355)
T ss_dssp HH--HHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSST
T ss_pred HH--HHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCCh
Confidence 10 0000000000 000 00000001112234478899999999999
Q ss_pred CCCCChhHHHHHhhhhhh
Q 039595 1009 EARPTMEKGFGHHIGYCD 1026 (1078)
Q Consensus 1009 ~~RPt~~ell~h~~~~~~ 1026 (1078)
++|||++|+++|+|+..-
T Consensus 323 ~~Rpt~~e~l~hp~f~~~ 340 (355)
T 2eu9_A 323 AQRITLAEALLHPFFAGL 340 (355)
T ss_dssp TTSCCHHHHTTSGGGGGC
T ss_pred hhCcCHHHHhcChhhcCC
Confidence 999999999999998753
No 272
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=9.5e-37 Score=344.17 Aligned_cols=265 Identities=23% Similarity=0.355 Sum_probs=204.3
Q ss_pred hcCCCccceeccCCceeEEEEEe-----CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCC
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAEL-----PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNAR 824 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 824 (1078)
.++|++.+.||+|+||.||+|.+ .+++.||||++... .....+.+.+|+.++++++||||+++++++...+
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 115 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG 115 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC----CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC--
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC----CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecC
Confidence 45789999999999999999973 36889999998753 3345678999999999999999999999986543
Q ss_pred --eeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccc
Q 039595 825 --HSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFG 902 (1078)
Q Consensus 825 --~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 902 (1078)
..++||||+++|+|.+++... ...+++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 116 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg 190 (326)
T 2w1i_A 116 RRNLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFG 190 (326)
T ss_dssp --CCEEEECCCTTCBHHHHHHHS--TTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCT
T ss_pred CCceEEEEECCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCc
Confidence 789999999999999999543 24589999999999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCC---ceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccch-------hhhhh
Q 039595 903 IAKFVEPYSSN---RTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSF-------SNMII 972 (1078)
Q Consensus 903 ~a~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~-------~~~~~ 972 (1078)
+++........ .....++..|+|||.+.+..++.++||||||+++|||++|+.||......+... .....
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (326)
T 2w1i_A 191 LTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 270 (326)
T ss_dssp TCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHH
T ss_pred chhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHH
Confidence 99877543321 223456778999999998889999999999999999999999964321111000 00000
Q ss_pred hhhhhcCCCC-CCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhhh
Q 039595 973 EVNQILDPRL-STPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYCD 1026 (1078)
Q Consensus 973 ~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~~ 1026 (1078)
.....+.... ....... ...+.+++.+||+.||++|||++|+++..-....
T Consensus 271 ~~~~~~~~~~~~~~~~~~---~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 271 HLIELLKNNGRLPRPDGC---PDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp HHHHHHHTTCCCCCCTTC---CHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHhhcCCCCCCCCcc---cHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1111111111 1111112 2357789999999999999999999987554433
No 273
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=3.7e-36 Score=334.47 Aligned_cols=257 Identities=17% Similarity=0.224 Sum_probs=195.4
Q ss_pred HhhcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeee-ecCCe
Q 039595 748 KATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFC-SNARH 825 (1078)
Q Consensus 748 ~~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~ 825 (1078)
...++|++.+.||+|+||+||+|.. .+++.||||++..... .+.+.+|+.+++.++|++++..++++ ..+..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~ 79 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK------HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDY 79 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTE
T ss_pred ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc------chHHHHHHHHHHHhcCCCCCCeeeeecCCCCc
Confidence 3457899999999999999999975 5789999998755421 23477899999999888777666655 67788
Q ss_pred eEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeee---CCCCcEEEeccc
Q 039595 826 SFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLL---DLEFEAHVSDFG 902 (1078)
Q Consensus 826 ~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~kl~DfG 902 (1078)
.++||||+ +|+|.+++... ...+++.+++.++.||+.||+|||++ +|+||||||+||++ +.++.+||+|||
T Consensus 80 ~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg 153 (296)
T 4hgt_A 80 NVMVMELL-GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFG 153 (296)
T ss_dssp EEEEEECC-CCBHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCT
T ss_pred eEEEEEcc-CCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCc
Confidence 89999999 89999998532 34589999999999999999999999 99999999999999 788999999999
Q ss_pred ccccccCCCC-------CceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccc-chhhhhhhh
Q 039595 903 IAKFVEPYSS-------NRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFS-SFSNMIIEV 974 (1078)
Q Consensus 903 ~a~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~-~~~~~~~~~ 974 (1078)
.++....... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||........ .........
T Consensus 154 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 233 (296)
T 4hgt_A 154 LAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEK 233 (296)
T ss_dssp TCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHH
T ss_pred cceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcc
Confidence 9987654322 22356799999999999999999999999999999999999999865432211 111111111
Q ss_pred hhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHh
Q 039595 975 NQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHH 1021 (1078)
Q Consensus 975 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~ 1021 (1078)
.... + ........ ...+.+++.+||+.||++|||++++++..
T Consensus 234 ~~~~-~-~~~~~~~~---~~~l~~li~~~l~~~p~~Rpt~~~l~~~l 275 (296)
T 4hgt_A 234 KMST-P-IEVLCKGY---PSEFATYLNFCRSLRFDDKPDYSYLRQLF 275 (296)
T ss_dssp HHHS-C-HHHHTTTS---CHHHHHHHHHHHTSCTTCCCCHHHHHHHH
T ss_pred cccc-h-hhhhhccC---CHHHHHHHHHHHhcCCCCCCCHHHHHHHH
Confidence 1111 1 00000001 12678899999999999999999998753
No 274
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=4e-36 Score=334.21 Aligned_cols=254 Identities=17% Similarity=0.213 Sum_probs=198.6
Q ss_pred hcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeee-ecCCeeE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFC-SNARHSF 827 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~ 827 (1078)
.++|++.+.||+|+||.||+|.. .+|+.||||++..... .+.+.+|+.+++.++|++++..++++ ..+...+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK------HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 81 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS------CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc------hhHHHHHHHHHHHhhcCCCCCccccccCCCCceE
Confidence 46899999999999999999975 5799999999865421 23578899999999988866665555 6778889
Q ss_pred EEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeC---CCCcEEEeccccc
Q 039595 828 LVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLD---LEFEAHVSDFGIA 904 (1078)
Q Consensus 828 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~---~~~~~kl~DfG~a 904 (1078)
+||||+ +++|.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++ .++.+||+|||.+
T Consensus 82 lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~ 155 (296)
T 3uzp_A 82 MVMELL-GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155 (296)
T ss_dssp EEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTC
T ss_pred EEEEec-CCCHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCc
Confidence 999999 88999999532 34689999999999999999999999 999999999999994 7899999999999
Q ss_pred ccccCCCC-------CceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccc-cchhhhhhhhhh
Q 039595 905 KFVEPYSS-------NRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINF-SSFSNMIIEVNQ 976 (1078)
Q Consensus 905 ~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~-~~~~~~~~~~~~ 976 (1078)
+....... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||....... ......+.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 235 (296)
T 3uzp_A 156 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM 235 (296)
T ss_dssp EECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhccccc
Confidence 87654332 1245679999999999999999999999999999999999999986543221 111111111111
Q ss_pred hcC-CCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHh
Q 039595 977 ILD-PRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHH 1021 (1078)
Q Consensus 977 ~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~ 1021 (1078)
... +.... .. ...+.+++.+||+.||++|||++++++..
T Consensus 236 ~~~~~~~~~---~~---~~~l~~li~~~l~~dp~~Rps~~~l~~~l 275 (296)
T 3uzp_A 236 STPIEVLCK---GY---PSEFATYLNFCRSLRFDDKPDYSYLRQLF 275 (296)
T ss_dssp HSCHHHHTT---TS---CHHHHHHHHHHHTSCTTCCCCHHHHHHHH
T ss_pred CCchHHHHh---hC---CHHHHHHHHHHHhcCcCcCCCHHHHHHHH
Confidence 110 00000 11 12578899999999999999999988754
No 275
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.6e-37 Score=344.56 Aligned_cols=256 Identities=22% Similarity=0.283 Sum_probs=195.0
Q ss_pred HHHHhhcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCCh--hhHHHHHHHHHHHhcC----CCCceeeEE
Q 039595 745 EIIKATDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNM--ADQDEFLNVVLALNEI----RHRNIVKFH 817 (1078)
Q Consensus 745 ~~~~~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~--~~~~~~~~e~~~l~~l----~h~niv~l~ 817 (1078)
+.....++|++.+.||+|+||.||+|.. .+++.||||++......... .....+.+|+.+++++ +||||++++
T Consensus 25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~ 104 (312)
T 2iwi_A 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL 104 (312)
T ss_dssp --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence 3445567899999999999999999965 47889999999764322111 1223456788888888 899999999
Q ss_pred eeeecCCeeEEEEee-cCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeC-CCCc
Q 039595 818 GFCSNARHSFLVCEY-LHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLD-LEFE 895 (1078)
Q Consensus 818 ~~~~~~~~~~lv~E~-~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~-~~~~ 895 (1078)
+++...+..++|+|| +.+++|.+++.. ...+++..++.++.||+.||+|||++ +|+||||||+||+++ .++.
T Consensus 105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 178 (312)
T 2iwi_A 105 DWFETQEGFMLVLERPLPAQDLFDYITE---KGPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGC 178 (312)
T ss_dssp EEC-----CEEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTE
T ss_pred EEEecCCeEEEEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCe
Confidence 999999999999999 789999999953 34589999999999999999999999 999999999999999 8899
Q ss_pred EEEecccccccccCCCCCceeeccccccccccccccCCC-CccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhh
Q 039595 896 AHVSDFGIAKFVEPYSSNRTEFVGTFGYAAPEIAYTMRA-TEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEV 974 (1078)
Q Consensus 896 ~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~ 974 (1078)
+||+|||.++..... ......|+..|+|||++.+..+ +.++||||+|+++|||++|+.||..... ....
T Consensus 179 ~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------~~~~ 248 (312)
T 2iwi_A 179 AKLIDFGSGALLHDE--PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE--------ILEA 248 (312)
T ss_dssp EEECCCSSCEECCSS--CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--------HHHT
T ss_pred EEEEEcchhhhcccC--cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH--------Hhhh
Confidence 999999999876542 2345678999999999887665 4589999999999999999999753211 0110
Q ss_pred hhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhhh
Q 039595 975 NQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYCD 1026 (1078)
Q Consensus 975 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~~ 1026 (1078)
...+.. .. ...+.+++.+||+.||++|||++|+++|+|+...
T Consensus 249 ----~~~~~~---~~---~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~ 290 (312)
T 2iwi_A 249 ----ELHFPA---HV---SPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTP 290 (312)
T ss_dssp ----CCCCCT---TS---CHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC-
T ss_pred ----ccCCcc---cC---CHHHHHHHHHHccCChhhCcCHHHHhcChhhcCc
Confidence 011111 11 1257789999999999999999999999997753
No 276
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.1e-36 Score=337.80 Aligned_cols=256 Identities=25% Similarity=0.363 Sum_probs=192.5
Q ss_pred hcCCCccceeccCCceeEEEEEeC--CCC--EEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCe
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP--SGD--IVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARH 825 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~--~~~--~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 825 (1078)
.++|++.+.||+|+||+||+|.+. +++ .||||+++..... .....+.+.+|+.++++++||||+++++++..+.
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~- 94 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLS-QPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP- 94 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC---------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccC-CHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-
Confidence 367999999999999999999753 333 6899998765322 3345678899999999999999999999998765
Q ss_pred eEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccc
Q 039595 826 SFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAK 905 (1078)
Q Consensus 826 ~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~ 905 (1078)
.++|+||+++|+|.+++... ...+++.++..++.|++.||+|||++ +++||||||+||+++.++.+||+|||++.
T Consensus 95 ~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~ 169 (291)
T 1u46_A 95 MKMVTELAPLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMR 169 (291)
T ss_dssp CEEEEECCTTCBHHHHHHHH--GGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred ceeeEecccCCCHHHHHHhc--cCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccccccc
Confidence 88999999999999999532 34689999999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCCC---ceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccchhhhhhhhhhhcCCC
Q 039595 906 FVEPYSSN---RTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSINFSSFSNMIIEVNQILDPR 981 (1078)
Q Consensus 906 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 981 (1078)
........ .....+|..|+|||.+.+..++.++||||||+++|||++ |+.||...... .....+.. ....
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~----~~~~ 243 (291)
T 1u46_A 170 ALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS--QILHKIDK----EGER 243 (291)
T ss_dssp ECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHT----SCCC
T ss_pred cccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH--HHHHHHHc----cCCC
Confidence 76543322 233467889999999998889999999999999999999 99997543221 11111100 0111
Q ss_pred CCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhh
Q 039595 982 LSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHI 1022 (1078)
Q Consensus 982 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~ 1022 (1078)
.. ..... ...+.+++.+||+.||++|||+++++++..
T Consensus 244 ~~-~~~~~---~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 280 (291)
T 1u46_A 244 LP-RPEDC---PQDIYNVMVQCWAHKPEDRPTFVALRDFLL 280 (291)
T ss_dssp CC-CCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CC-CCcCc---CHHHHHHHHHHccCCcccCcCHHHHHHHHH
Confidence 11 11111 235788999999999999999999998654
No 277
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2e-36 Score=369.60 Aligned_cols=247 Identities=26% Similarity=0.350 Sum_probs=193.9
Q ss_pred ceeccCCceeEEEEEeC---CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEEEEeec
Q 039595 757 FCIGKGGQGSVYKAELP---SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFLVCEYL 833 (1078)
Q Consensus 757 ~~lG~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~E~~ 833 (1078)
+.||+|+||+||+|.+. +++.||||+++.... .....+++.+|+.++++++|||||++++++.. +..++||||+
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~ 451 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN--DPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMA 451 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGG--CGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECC
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEcc
Confidence 47999999999999542 467899999976432 33456789999999999999999999999975 4578999999
Q ss_pred CCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccccccCCCC-
Q 039595 834 HRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVEPYSS- 912 (1078)
Q Consensus 834 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~~~~~- 912 (1078)
++|+|.+++.. ...+++.+++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.+.....
T Consensus 452 ~~g~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 525 (635)
T 4fl3_A 452 ELGPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 525 (635)
T ss_dssp TTEEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----
T ss_pred CCCCHHHHHhh---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc
Confidence 99999999943 35689999999999999999999999 999999999999999999999999999987654322
Q ss_pred --CceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccchhhhhhhhhhhcCCCCCCCCCcc
Q 039595 913 --NRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSPGV 989 (1078)
Q Consensus 913 --~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 989 (1078)
......+|+.|+|||++.+..++.++|||||||++|||++ |+.||..... ......+. ........ ...
T Consensus 526 ~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~--~~~~~~i~---~~~~~~~p---~~~ 597 (635)
T 4fl3_A 526 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--SEVTAMLE---KGERMGCP---AGC 597 (635)
T ss_dssp ---------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHHHHH---TTCCCCCC---TTC
T ss_pred cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHH---cCCCCCCC---CCC
Confidence 2234457889999999999999999999999999999998 9999754332 11111111 11111111 112
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhh
Q 039595 990 MDKLISIMEVAILCLDESPEARPTMEKGFGHHIG 1023 (1078)
Q Consensus 990 ~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~ 1023 (1078)
. .++.+++.+||+.||++||+++++++..-.
T Consensus 598 ~---~~l~~li~~cl~~dP~~RPs~~~l~~~L~~ 628 (635)
T 4fl3_A 598 P---REMYDLMNLCWTYDVENRPGFAAVELRLRN 628 (635)
T ss_dssp C---HHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred C---HHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 2 357788999999999999999999876543
No 278
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=7.5e-36 Score=345.76 Aligned_cols=312 Identities=20% Similarity=0.240 Sum_probs=206.5
Q ss_pred CCCCCcEEeccCCcccccCCCCCCCCCCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCccccccccccee
Q 039595 100 SFPHLVNLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEF 179 (1078)
Q Consensus 100 ~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L 179 (1078)
.++++++|++++|.+....+..+..+++|++|+|++|.+++..+..|+.+++|++|+|++|.+++..|..++.+++|++|
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 46778888888888765444446778888888888888876666678888888888888888876666777777777777
Q ss_pred ecccccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccC
Q 039595 180 SFCHNNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLS 259 (1078)
Q Consensus 180 ~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 259 (1078)
++++|.++...+..|+++++|++|+|++|.+++..|..|+++++|++|++++|++++. .+..+++|+.|++++|.++
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~ 199 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLS 199 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCS
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccc
Confidence 7777777743333457777777777777777766666677777777777777777654 2455667777777777666
Q ss_pred CCCCcccCCCcccceeecccccccCccccccccccCCceeeecccCCCCCCCccccCCCccCeeeccccccCccCCCCCC
Q 039595 260 GSIPSIIGNLKSLHQLDLIENQLSGSIPLSFGNLSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLNGVIPPSIG 339 (1078)
Q Consensus 260 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~ 339 (1078)
+ +...++|+.|++++|.+++. |.. ..++|++|++++|++++. ..+.
T Consensus 200 ~-----~~~~~~L~~L~l~~n~l~~~-~~~--------------------------~~~~L~~L~l~~n~l~~~--~~l~ 245 (390)
T 3o6n_A 200 T-----LAIPIAVEELDASHNSINVV-RGP--------------------------VNVELTILKLQHNNLTDT--AWLL 245 (390)
T ss_dssp E-----EECCSSCSEEECCSSCCCEE-ECC--------------------------CCSSCCEEECCSSCCCCC--GGGG
T ss_pred c-----cCCCCcceEEECCCCeeeec-ccc--------------------------ccccccEEECCCCCCccc--HHHc
Confidence 3 12234566666666666533 211 124455555555555532 3455
Q ss_pred CCCcCcEEEccCccCCCCCCccccccCCCCeEEcccccCccccCCCCccCCCCceeecccCcCCCCCCccccccCCCCeE
Q 039595 340 NLSSLRNLSLFNNGLYGSIPEEIGYLKSLSELKLCKNNLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLKSLTSLKRV 419 (1078)
Q Consensus 340 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L 419 (1078)
.+++|+.|++++|.+.+..|..+..+++|++|+|++|++++ +|..+..+++|++|++++|++. .+|..+..+++|++|
T Consensus 246 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L 323 (390)
T 3o6n_A 246 NYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENL 323 (390)
T ss_dssp GCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEE
T ss_pred CCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEE
Confidence 55666666666666665556666666666666666666654 3444455666666666666665 345556666777777
Q ss_pred EccCccccccchhhccCCCCCcEecCCCCccCCc
Q 039595 420 RFNQNNLVGKVYEAFGDHPNLTFLDLSQNNFDGK 453 (1078)
Q Consensus 420 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 453 (1078)
++++|.+..+. +..+++|+.|++++|++++.
T Consensus 324 ~L~~N~i~~~~---~~~~~~L~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 324 YLDHNSIVTLK---LSTHHTLKNLTLSHNDWDCN 354 (390)
T ss_dssp ECCSSCCCCCC---CCTTCCCSEEECCSSCEEHH
T ss_pred ECCCCccceeC---chhhccCCEEEcCCCCccch
Confidence 77777776653 55667788888888887754
No 279
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=2.4e-36 Score=340.11 Aligned_cols=284 Identities=19% Similarity=0.258 Sum_probs=208.2
Q ss_pred cCCCHHHHHHHHHHHHhcCCCCCCccccCCCCCCCCCCCCCCCCcccceEeeCCCCeEEEeccCccccCCcccCCccCCC
Q 039595 22 TSDSSAEACALLNWKTSLQNQNLNSSLLSSWTLYPTNASKISPCSWFGISCNHAGSRVISINLSTLCLNGTFQDFSFSSF 101 (1078)
Q Consensus 22 ~~~~~~~~~all~~k~~~~~~~~~~~~l~sW~~~~~~~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l 101 (1078)
.++..+|++||++||+++..++ .+.+++|... .....++|.|.||+|+.....+ .....
T Consensus 22 ~~~~~~~~~aLl~~k~~~~~~~--~~~~~~w~~~--~~~~~~~~~~~g~~~~~~~~~l-----------------~~~~~ 80 (328)
T 4fcg_A 22 STALRPYHDVLSQWQRHYNADR--NRWHSAWRQA--NSNNPQIETRTGRALKATADLL-----------------EDATQ 80 (328)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCC--TTHHHHHHHH--TTTCTTSCCSHHHHHHHHHHHH-----------------HHHTS
T ss_pred cccCchHHHHHHHHHHhccCCc--hhhhhhhccc--ccccccccccCCcchhhhHHHH-----------------hcccc
Confidence 3456789999999999996653 4667899421 1135789999999996321100 11234
Q ss_pred CCCcEEeccCCcccccCCCCCCCCCCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeec
Q 039595 102 PHLVNLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSF 181 (1078)
Q Consensus 102 ~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l 181 (1078)
++++.|+|++|.+. .+|..++++++|++|+|++|.++ .+|..++++++|++|+|++|+++ .+|..++.+++|++|++
T Consensus 81 ~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L 157 (328)
T 4fcg_A 81 PGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSI 157 (328)
T ss_dssp TTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEE
T ss_pred cceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEEC
Confidence 67888999999887 78888888999999999999998 78888999999999999999998 88888999999999999
Q ss_pred ccccccCCccCcccC---------CCCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEe
Q 039595 182 CHNNVSGRIPSSLGN---------LSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLF 252 (1078)
Q Consensus 182 ~~n~~~~~~p~~l~~---------l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 252 (1078)
++|++.+.+|..++. +++|++|+|++|+++ .+|..++++++|++|+|++|++++ +|..+..+++|++|+
T Consensus 158 ~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~ 235 (328)
T 4fcg_A 158 RACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELD 235 (328)
T ss_dssp EEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEE
T ss_pred CCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEE
Confidence 998888888887765 777777777777776 566667777777777777777765 344566677777777
Q ss_pred ccccccCCCCCcccCCCcccceeecccccccCccccccccccCCceeeecccCCCCCCCccccCCCccCeeeccccccC
Q 039595 253 LYKNSLSGSIPSIIGNLKSLHQLDLIENQLSGSIPLSFGNLSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLN 331 (1078)
Q Consensus 253 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~ 331 (1078)
|++|.+.+.+|..++++++|++|+|++|.+.+.+|..++.+++|+.|++++|++.+.+|..++++++|+.+++..|.+.
T Consensus 236 Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 236 LRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp CTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred CcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 7777766666666777777777777776666666666666666666666666666666666666666666666655443
No 280
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=2.2e-35 Score=360.82 Aligned_cols=312 Identities=20% Similarity=0.240 Sum_probs=211.7
Q ss_pred CCCCCcEEeccCCcccccCCCCCCCCCCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCccccccccccee
Q 039595 100 SFPHLVNLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEF 179 (1078)
Q Consensus 100 ~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L 179 (1078)
.+++++.|++++|.+.+..+..++++++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+.+++|++|
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 35677888888887765555556778888888888888877666778888888888888888776666667777777777
Q ss_pred ecccccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccC
Q 039595 180 SFCHNNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLS 259 (1078)
Q Consensus 180 ~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 259 (1078)
+|++|.+++..+..|+++++|++|+|++|.+++..|..|+++++|++|+|++|++++. .++.+++|+.|++++|.++
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~l~~L~~L~l~~n~l~ 205 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLS 205 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC---CGGGCTTCSEEECCSSCCS
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc---ChhhhhhhhhhhcccCccc
Confidence 7777777754444557777777777777777766666677777777777777777654 2455566677777776665
Q ss_pred CCCCcccCCCcccceeecccccccCccccccccccCCceeeecccCCCCCCCccccCCCccCeeeccccccCccCCCCCC
Q 039595 260 GSIPSIIGNLKSLHQLDLIENQLSGSIPLSFGNLSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLNGVIPPSIG 339 (1078)
Q Consensus 260 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~ 339 (1078)
+ +...++|+.|++++|.++...+.. .++|+.|+|++|.+++ +..+.
T Consensus 206 ~-----l~~~~~L~~L~ls~n~l~~~~~~~---------------------------~~~L~~L~L~~n~l~~--~~~l~ 251 (597)
T 3oja_B 206 T-----LAIPIAVEELDASHNSINVVRGPV---------------------------NVELTILKLQHNNLTD--TAWLL 251 (597)
T ss_dssp E-----EECCTTCSEEECCSSCCCEEECSC---------------------------CSCCCEEECCSSCCCC--CGGGG
T ss_pred c-----ccCCchhheeeccCCccccccccc---------------------------CCCCCEEECCCCCCCC--Chhhc
Confidence 3 223345666666666665322211 1356666666666654 24566
Q ss_pred CCCcCcEEEccCccCCCCCCccccccCCCCeEEcccccCccccCCCCccCCCCceeecccCcCCCCCCccccccCCCCeE
Q 039595 340 NLSSLRNLSLFNNGLYGSIPEEIGYLKSLSELKLCKNNLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLKSLTSLKRV 419 (1078)
Q Consensus 340 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L 419 (1078)
.+++|+.|+|++|.+.+.+|..|+.+++|+.|+|++|++++ +|..+..+++|+.|+|++|.+. .+|..+..+++|++|
T Consensus 252 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L 329 (597)
T 3oja_B 252 NYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENL 329 (597)
T ss_dssp GCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEE
T ss_pred cCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEE
Confidence 66666666666666666666666666677777777776665 3445566677777777777776 456666777777777
Q ss_pred EccCccccccchhhccCCCCCcEecCCCCccCCc
Q 039595 420 RFNQNNLVGKVYEAFGDHPNLTFLDLSQNNFDGK 453 (1078)
Q Consensus 420 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 453 (1078)
++++|.+.++. +..+++|+.|++++|++.+.
T Consensus 330 ~L~~N~l~~~~---~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 330 YLDHNSIVTLK---LSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp ECCSSCCCCCC---CCTTCCCSEEECCSSCEEHH
T ss_pred ECCCCCCCCcC---hhhcCCCCEEEeeCCCCCCh
Confidence 77777777664 55677899999999988764
No 281
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=3.3e-36 Score=338.80 Aligned_cols=259 Identities=23% Similarity=0.350 Sum_probs=197.7
Q ss_pred HhhcCCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeE
Q 039595 748 KATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSF 827 (1078)
Q Consensus 748 ~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 827 (1078)
...++|++.+.||+|+||.||+|..+. .||+|++..... .....+.+.+|+.++++++||||+++++++.+....+
T Consensus 30 i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 105 (319)
T 2y4i_B 30 IPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERD--NEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLA 105 (319)
T ss_dssp SCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSC--CCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEE
T ss_pred CCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCC--CHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceE
Confidence 345789999999999999999998753 499999875432 2223345778999999999999999999999999999
Q ss_pred EEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccccc
Q 039595 828 LVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFV 907 (1078)
Q Consensus 828 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~ 907 (1078)
+||||+++++|.+++... ...+++.+++.++.||+.||+|||++ +|+||||||+||+++ ++.+||+|||+++..
T Consensus 106 iv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~ 179 (319)
T 2y4i_B 106 IITSLCKGRTLYSVVRDA--KIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSIS 179 (319)
T ss_dssp EECBCCCSEEHHHHTTSS--CCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC--
T ss_pred EEeecccCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcccc
Confidence 999999999999999542 34688999999999999999999999 999999999999998 789999999998765
Q ss_pred cCC-----CCCceeecccccccccccccc---------CCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhh
Q 039595 908 EPY-----SSNRTEFVGTFGYAAPEIAYT---------MRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIE 973 (1078)
Q Consensus 908 ~~~-----~~~~~~~~gt~~y~aPE~~~~---------~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~ 973 (1078)
... ........|++.|+|||.+.+ ..++.++|||||||++|||++|+.||...... .... .
T Consensus 180 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~~---~ 254 (319)
T 2y4i_B 180 GVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE--AIIW---Q 254 (319)
T ss_dssp --------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH--HHHH---H
T ss_pred ccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHH---H
Confidence 321 122334568999999999874 45788999999999999999999997543221 1111 1
Q ss_pred hhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhhh
Q 039595 974 VNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYCD 1026 (1078)
Q Consensus 974 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~~ 1026 (1078)
......+.... .... ..+.+++.+||+.||++|||++++++..-....
T Consensus 255 ~~~~~~~~~~~--~~~~---~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~ 302 (319)
T 2y4i_B 255 MGTGMKPNLSQ--IGMG---KEISDILLFCWAFEQEERPTFTKLMDMLEKLPK 302 (319)
T ss_dssp HHTTCCCCCCC--SSCC---TTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC--
T ss_pred hccCCCCCCCc--CCCC---HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 11111222111 0111 246788999999999999999999987654443
No 282
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.4e-35 Score=341.55 Aligned_cols=333 Identities=19% Similarity=0.165 Sum_probs=166.6
Q ss_pred CcccceeecccccccCccccccccccCCceeeecccCCCCCCCccccCCCccCeeeccccccCccCCCCCCCCCcCcEEE
Q 039595 269 LKSLHQLDLIENQLSGSIPLSFGNLSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLNGVIPPSIGNLSSLRNLS 348 (1078)
Q Consensus 269 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 348 (1078)
+++++.|++++|.++...+..|..+++|+.|++++|.+++..+..|.++++|++|+|++|++++..|..|+++++|++|+
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 45667777777766654444455566666666666665555555555555555555555555555555555555555555
Q ss_pred ccCccCCCCCCccccccCCCCeEEcccccCccccCCCCccCCCCceeecccCcCCCCCCccccccCCCCeEEccCccccc
Q 039595 349 LFNNGLYGSIPEEIGYLKSLSELKLCKNNLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLKSLTSLKRVRFNQNNLVG 428 (1078)
Q Consensus 349 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 428 (1078)
+++|++....+..|..+++|++|++++|++++..|..+.++++|++|++++|++++
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~------------------------ 179 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH------------------------ 179 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSB------------------------
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCc------------------------
Confidence 55555553333334555555555555555555555555555555555555555443
Q ss_pred cchhhccCCCCCcEecCCCCccCCccCccccCCCCCceecccccccCCCCCccccCCCcccEEeccCCccCCCccccccc
Q 039595 429 KVYEAFGDHPNLTFLDLSQNNFDGKISFNWRNLPKLDTFIVSMNNIFGSIPLEIGDSSKLQFLDLSSNHIVGKIPVQLEK 508 (1078)
Q Consensus 429 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~ 508 (1078)
+. +..+++|+.|++++|.++... ...+|++|++++|.+... |.. .
T Consensus 180 ~~---~~~l~~L~~L~l~~n~l~~~~-----------------------------~~~~L~~L~l~~n~l~~~-~~~--~ 224 (390)
T 3o6n_A 180 VD---LSLIPSLFHANVSYNLLSTLA-----------------------------IPIAVEELDASHNSINVV-RGP--V 224 (390)
T ss_dssp CC---GGGCTTCSEEECCSSCCSEEE-----------------------------CCSSCSEEECCSSCCCEE-ECC--C
T ss_pred cc---cccccccceeecccccccccC-----------------------------CCCcceEEECCCCeeeec-ccc--c
Confidence 21 222344555555555444211 112344444444444322 111 1
Q ss_pred CccCcEEeccCCccCCCcccccccccccceeeccCccccCCCCcccccccccccccccCcccccccchhhhcccccCeee
Q 039595 509 LFSLNKLILSLNQLSGSVPLEFGSLTELQYLDLSANKLSSSIPKSIGNLLKLYYLNLSNNQFSHTIPIEFEKLIHLSKLD 588 (1078)
Q Consensus 509 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 588 (1078)
.++|+.|++++|++++. ..+..+++|++|+|++|.+++..|..|..+++|++|+|++|++++ +|..+..+++|+.|+
T Consensus 225 ~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~ 301 (390)
T 3o6n_A 225 NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLD 301 (390)
T ss_dssp CSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEE
T ss_pred cccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEE
Confidence 23444444444444432 234444555555555555554444455555555555555555542 333444455555555
Q ss_pred cCCCccCCcCCCCcccccccceeeccCccccCCcccccccCCcCcEEEcccCcCCCCCCC--CccccCccccCCCCcCCC
Q 039595 589 LSHNILQEEIPPQVCNMESLEKLNLSHNNLSGFIPRCFEKMRSLSCIDICYNELQGPIPN--STVFKDGLMEGNKGLCGN 666 (1078)
Q Consensus 589 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~l~l~~N~l~~~~~~--~~~~~~~~~~~n~~lc~~ 666 (1078)
|++|++++ +|..+..+++|++|+|++|++++.. +..+++|+.|++++|++++.... ...+....+.+++..|..
T Consensus 302 L~~n~l~~-~~~~~~~l~~L~~L~L~~N~i~~~~---~~~~~~L~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~c~~ 377 (390)
T 3o6n_A 302 LSHNHLLH-VERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHCKI 377 (390)
T ss_dssp CCSSCCCC-CGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEECCSSCEEHHHHHHHTTTCCTTTBCCCCSCCCT
T ss_pred CCCCccee-cCccccccCcCCEEECCCCccceeC---chhhccCCEEEcCCCCccchhHHHHHHHHHhhcccccCceecc
Confidence 55555542 3344445555555555555555331 44455555555555555542211 011233445566666765
Q ss_pred c
Q 039595 667 F 667 (1078)
Q Consensus 667 ~ 667 (1078)
+
T Consensus 378 ~ 378 (390)
T 3o6n_A 378 D 378 (390)
T ss_dssp T
T ss_pred c
Confidence 3
No 283
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=5.2e-35 Score=344.45 Aligned_cols=255 Identities=19% Similarity=0.252 Sum_probs=198.5
Q ss_pred hcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCC-CceeeEEeeeecCCeeE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRH-RNIVKFHGFCSNARHSF 827 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~ 827 (1078)
.++|++.++||+|+||.||+|.. .+++.||||++..... ...+..|+.+++.++| ++|..+..++.+....+
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~------~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~ 79 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK------HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNV 79 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS------SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc------cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEE
Confidence 46899999999999999999975 5799999998765432 2246789999999976 56666777778888999
Q ss_pred EEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeee---CCCCcEEEeccccc
Q 039595 828 LVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLL---DLEFEAHVSDFGIA 904 (1078)
Q Consensus 828 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~kl~DfG~a 904 (1078)
+||||+ +++|.+++... ...+++.+++.++.||+.||+|||++ +|+||||||+|||+ +.++.+||+|||++
T Consensus 80 lvme~~-g~sL~~ll~~~--~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla 153 (483)
T 3sv0_A 80 LVMDLL-GPSLEDLFNFC--SRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 153 (483)
T ss_dssp EEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTC
T ss_pred EEEECC-CCCHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcc
Confidence 999999 88999999532 34699999999999999999999999 99999999999999 58899999999999
Q ss_pred ccccCCCCC-------ceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCccccccc-chhhhhhhhhh
Q 039595 905 KFVEPYSSN-------RTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFS-SFSNMIIEVNQ 976 (1078)
Q Consensus 905 ~~~~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~-~~~~~~~~~~~ 976 (1078)
+.+...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||........ .....+...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~-- 231 (483)
T 3sv0_A 154 KKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEK-- 231 (483)
T ss_dssp EECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHH--
T ss_pred eeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhc--
Confidence 877543321 2356799999999999999999999999999999999999999865433211 111111100
Q ss_pred hcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHh
Q 039595 977 ILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHH 1021 (1078)
Q Consensus 977 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~ 1021 (1078)
............. ..++.+++.+||+.||++||+++++++..
T Consensus 232 ~~~~~~~~l~~~~---p~~l~~li~~cl~~dP~~RPs~~el~~~L 273 (483)
T 3sv0_A 232 KVATSIEALCRGY---PTEFASYFHYCRSLRFDDKPDYSYLKRLF 273 (483)
T ss_dssp HHHSCHHHHHTTS---CHHHHHHHHHHHTCCTTCCCCHHHHHHHH
T ss_pred cccccHHHHhcCC---cHHHHHHHHHHhcCChhhCcCHHHHHHHH
Confidence 0000000000001 12678899999999999999999988754
No 284
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=2.7e-35 Score=360.89 Aligned_cols=256 Identities=22% Similarity=0.332 Sum_probs=200.0
Q ss_pred hhcCCCccceeccCCceeEEEEEeC----CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCC
Q 039595 749 ATDDFDEKFCIGKGGQGSVYKAELP----SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNAR 824 (1078)
Q Consensus 749 ~~~~~~~~~~lG~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 824 (1078)
..++|++.+.||+|+||+||+|.+. .+..||||++.... .....+.+.+|+.++++++||||+++++++.+ +
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~ 463 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT---SDSVREKFLQEALTMRQFDHPHIVKLIGVITE-N 463 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-S
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-C
Confidence 4567899999999999999999764 24579999986532 33445779999999999999999999999854 5
Q ss_pred eeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccccc
Q 039595 825 HSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIA 904 (1078)
Q Consensus 825 ~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a 904 (1078)
..++||||+++|+|.++++.. ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 464 ~~~lv~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a 538 (656)
T 2j0j_A 464 PVWIIMELCTLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLS 538 (656)
T ss_dssp SCEEEEECCTTCBHHHHHHHT--TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCC
T ss_pred ceEEEEEcCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCC
Confidence 689999999999999999542 34589999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCC-CceeeccccccccccccccCCCCccchhHHHHHHHHHHHh-CCCCCCcccccccchhhhhhhhhhhcCCCC
Q 039595 905 KFVEPYSS-NRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIK-GNHPRDFFSINFSSFSNMIIEVNQILDPRL 982 (1078)
Q Consensus 905 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 982 (1078)
+....... ......+|+.|+|||.+.+..++.++|||||||++|||++ |..||...... ..... ......+..
T Consensus 539 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~--~~~~~---i~~~~~~~~ 613 (656)
T 2j0j_A 539 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGR---IENGERLPM 613 (656)
T ss_dssp CSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHH---HHHTCCCCC
T ss_pred eecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH--HHHHH---HHcCCCCCC
Confidence 87654322 2234457789999999999999999999999999999997 99997533221 11111 111111111
Q ss_pred CCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhh
Q 039595 983 STPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGY 1024 (1078)
Q Consensus 983 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~ 1024 (1078)
. +... ..+.+++.+||+.||++|||++|++++.-..
T Consensus 614 ~---~~~~---~~l~~li~~~l~~dP~~RPs~~el~~~L~~i 649 (656)
T 2j0j_A 614 P---PNCP---PTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649 (656)
T ss_dssp C---TTCC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred C---cccc---HHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 1 1112 2577899999999999999999999876543
No 285
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=3.7e-35 Score=358.75 Aligned_cols=334 Identities=19% Similarity=0.171 Sum_probs=184.3
Q ss_pred CcccceeecccccccCccccccccccCCceeeecccCCCCCCCccccCCCccCeeeccccccCccCCCCCCCCCcCcEEE
Q 039595 269 LKSLHQLDLIENQLSGSIPLSFGNLSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLNGVIPPSIGNLSSLRNLS 348 (1078)
Q Consensus 269 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 348 (1078)
+.+++.|++++|.+++..+..|..+++|+.|++++|.+++..|..|+++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 45677777777777765555566666666666666666665555666666666666666666665555666666666666
Q ss_pred ccCccCCCCCCccccccCCCCeEEcccccCccccCCCCccCCCCceeecccCcCCCCCCccccccCCCCeEEccCccccc
Q 039595 349 LFNNGLYGSIPEEIGYLKSLSELKLCKNNLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLKSLTSLKRVRFNQNNLVG 428 (1078)
Q Consensus 349 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 428 (1078)
|++|.+++..+..|+.+++|++|+|++|.+++..|..|.++++|++|++++|.+++.. +..
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~---------------- 190 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSL---------------- 190 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGG----------------
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhh----------------
Confidence 6666666444444556666666666666666555555666666666666655554431 222
Q ss_pred cchhhccCCCCCcEecCCCCccCCccCccccCCCCCceecccccccCCCCCccccCCCcccEEeccCCccCCCccccccc
Q 039595 429 KVYEAFGDHPNLTFLDLSQNNFDGKISFNWRNLPKLDTFIVSMNNIFGSIPLEIGDSSKLQFLDLSSNHIVGKIPVQLEK 508 (1078)
Q Consensus 429 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~ 508 (1078)
+++|+.|++++|.+++. ....+|+.|++++|.+....+ .+
T Consensus 191 --------l~~L~~L~l~~n~l~~l-----------------------------~~~~~L~~L~ls~n~l~~~~~-~~-- 230 (597)
T 3oja_B 191 --------IPSLFHANVSYNLLSTL-----------------------------AIPIAVEELDASHNSINVVRG-PV-- 230 (597)
T ss_dssp --------CTTCSEEECCSSCCSEE-----------------------------ECCTTCSEEECCSSCCCEEEC-SC--
T ss_pred --------hhhhhhhhcccCccccc-----------------------------cCCchhheeeccCCccccccc-cc--
Confidence 34455555555544321 111234444444444432211 11
Q ss_pred CccCcEEeccCCccCCCcccccccccccceeeccCccccCCCCcccccccccccccccCcccccccchhhhcccccCeee
Q 039595 509 LFSLNKLILSLNQLSGSVPLEFGSLTELQYLDLSANKLSSSIPKSIGNLLKLYYLNLSNNQFSHTIPIEFEKLIHLSKLD 588 (1078)
Q Consensus 509 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 588 (1078)
.++|+.|+|++|++++ +..+..+++|++|+|++|.+++..|..|..+++|++|+|++|++++ +|..+..+++|+.|+
T Consensus 231 ~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~ 307 (597)
T 3oja_B 231 NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLD 307 (597)
T ss_dssp CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEE
T ss_pred CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEE
Confidence 1345555555555543 2344555555555555555555555555555555555555555543 344445555566666
Q ss_pred cCCCccCCcCCCCcccccccceeeccCccccCCcccccccCCcCcEEEcccCcCCCCCCCC--ccccCccccCCCCcCCC
Q 039595 589 LSHNILQEEIPPQVCNMESLEKLNLSHNNLSGFIPRCFEKMRSLSCIDICYNELQGPIPNS--TVFKDGLMEGNKGLCGN 666 (1078)
Q Consensus 589 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~l~l~~N~l~~~~~~~--~~~~~~~~~~n~~lc~~ 666 (1078)
|++|.++ .+|..+..+++|++|+|++|++++.. +..+++|+.|++++|+|+|..... ..+....+.+++..|+.
T Consensus 308 Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~L~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 383 (597)
T 3oja_B 308 LSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHCKI 383 (597)
T ss_dssp CCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEECCSSCEEHHHHHHHTTTCCTTTBCCCCCCCCT
T ss_pred CCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC---hhhcCCCCEEEeeCCCCCChhHHHHHHHHhhhccccccccCCc
Confidence 6666555 34444555566666666666665432 445566666666666666543211 12334456788888886
Q ss_pred cc
Q 039595 667 FE 668 (1078)
Q Consensus 667 ~~ 668 (1078)
+.
T Consensus 384 ~~ 385 (597)
T 3oja_B 384 DY 385 (597)
T ss_dssp TC
T ss_pred ch
Confidence 43
No 286
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=6e-35 Score=325.08 Aligned_cols=237 Identities=20% Similarity=0.246 Sum_probs=181.8
Q ss_pred hcCCCcc-ceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHH-hcCCCCceeeEEeeeec----
Q 039595 750 TDDFDEK-FCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLAL-NEIRHRNIVKFHGFCSN---- 822 (1078)
Q Consensus 750 ~~~~~~~-~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~---- 822 (1078)
.++|.+. +.||+|+||.||+|.. .+++.||+|++... ..+.+|+.++ +..+||||+++++++..
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~ 86 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC---------PKARREVELHWRASQCPHIVRIVDVYENLYAG 86 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS---------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc---------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCC
Confidence 4567776 7799999999999965 57899999998532 3456777777 66699999999999876
Q ss_pred CCeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCC---CCcEEEe
Q 039595 823 ARHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDL---EFEAHVS 899 (1078)
Q Consensus 823 ~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~kl~ 899 (1078)
....++||||+++|+|.+++... ....+++.+++.++.|++.||+|||++ +|+||||||+||+++. ++.+||+
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~ 162 (299)
T 3m2w_A 87 RKCLLIVMECLDGGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLT 162 (299)
T ss_dssp EEEEEEEECCCCSCBHHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEEC
T ss_pred CceEEEEEeecCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEe
Confidence 67889999999999999999543 234689999999999999999999999 9999999999999998 7899999
Q ss_pred cccccccccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcC
Q 039595 900 DFGIAKFVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILD 979 (1078)
Q Consensus 900 DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 979 (1078)
|||++.... +..++.++||||+||++|||++|+.||....... ..... ......
T Consensus 163 Dfg~a~~~~----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~--~~~~~--~~~~~~ 216 (299)
T 3m2w_A 163 DFGFAKETT----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA--ISPGM--KTRIRM 216 (299)
T ss_dssp CCTTCEECT----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC---------CCS--CCSSCT
T ss_pred ccccccccc----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchh--hhHHH--HHHHhh
Confidence 999986432 2357789999999999999999999975332210 00000 000001
Q ss_pred CCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 980 PRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 980 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
.....+.+........+.+++.+||+.||++|||++|+++|+|+..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~ 262 (299)
T 3m2w_A 217 GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 262 (299)
T ss_dssp TCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHT
T ss_pred ccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcc
Confidence 1111110000111236788999999999999999999999999764
No 287
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=1.9e-35 Score=334.94 Aligned_cols=252 Identities=15% Similarity=0.147 Sum_probs=189.9
Q ss_pred hcCCCccceeccCCceeEEEEEeCCCCEEEEEEecccccc----CChhhHHHHHHHHHHHhcCC---------CCceeeE
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLS----GNMADQDEFLNVVLALNEIR---------HRNIVKF 816 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~~e~~~l~~l~---------h~niv~l 816 (1078)
.++|++.+.||+|+||+||+|+. +|+.||||++...... ......+.+.+|+.++++++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 46789999999999999999987 6899999999765321 12334577888999988886 6666665
Q ss_pred Eee-----------------eec-------------CCeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHH
Q 039595 817 HGF-----------------CSN-------------ARHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANA 866 (1078)
Q Consensus 817 ~~~-----------------~~~-------------~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~ 866 (1078)
.++ +.+ .+..|+||||+++|++.+.+.+ ..+++.+++.++.||+.|
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~a 173 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTAS 173 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHH
Confidence 554 333 6889999999999977666622 458999999999999999
Q ss_pred HHHHH-hcCCCCcEecCCCCCCeeeCCCC--------------------cEEEecccccccccCCCCCceeecccccccc
Q 039595 867 LSYLH-HDCLPSIIHRDISSKNVLLDLEF--------------------EAHVSDFGIAKFVEPYSSNRTEFVGTFGYAA 925 (1078)
Q Consensus 867 L~~LH-~~~~~~ivH~Dlk~~NIll~~~~--------------------~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~a 925 (1078)
|+||| ++ +|+||||||+|||++.++ .+||+|||+|+.... ...+||+.|||
T Consensus 174 L~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-----~~~~gt~~y~a 245 (336)
T 2vuw_A 174 LAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-----GIVVFCDVSMD 245 (336)
T ss_dssp HHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-----TEEECCCCTTC
T ss_pred HHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-----CcEEEeecccC
Confidence 99999 88 999999999999999887 899999999987653 24589999999
Q ss_pred ccccccCCCCccchhHHHHHH-HHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCCCccHHHHHHHHHHHHhcc
Q 039595 926 PEIAYTMRATEKYDVYSFGVL-VFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSPGVMDKLISIMEVAILCL 1004 (1078)
Q Consensus 926 PE~~~~~~~~~~sDvwSlG~i-l~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 1004 (1078)
||++.+.. +.++||||+|++ .+++++|..||... .+ ............................++.+++.+||
T Consensus 246 PE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L 320 (336)
T 2vuw_A 246 EDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV--LW--LHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTML 320 (336)
T ss_dssp SGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH--HH--HHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGG
T ss_pred hhhhcCCC-ccceehhhhhCCCCcccccccCCCcch--hh--hhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHh
Confidence 99998766 899999998777 78889999995311 00 00011111111111111111112334567899999999
Q ss_pred cCCCCCCCChhHHH-HHhhhh
Q 039595 1005 DESPEARPTMEKGF-GHHIGY 1024 (1078)
Q Consensus 1005 ~~dP~~RPt~~ell-~h~~~~ 1024 (1078)
+.| |++|++ +|||+.
T Consensus 321 ~~d-----sa~e~l~~Hp~f~ 336 (336)
T 2vuw_A 321 NFS-----SATDLLCQHSLFK 336 (336)
T ss_dssp GSS-----SHHHHHHHCGGGC
T ss_pred ccC-----CHHHHHhcCCCcC
Confidence 976 999999 999963
No 288
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.3e-34 Score=336.99 Aligned_cols=251 Identities=15% Similarity=0.126 Sum_probs=186.3
Q ss_pred hcCCCccceeccCCceeEEEEEe-CCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCC-Cceee------------
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAEL-PSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRH-RNIVK------------ 815 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~------------ 815 (1078)
...|...+.||+|+||+||+|.+ .+|+.||||++...... .....+.+.+|+.+++.++| ++...
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~-~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~ 155 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERP-PSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 155 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC-----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCc-cHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence 34577888999999999999974 57999999998744322 23345678999999999987 22111
Q ss_pred ---------EEeeeec-----CCeeEEEEeecCCCCHHHHhcC----CCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 039595 816 ---------FHGFCSN-----ARHSFLVCEYLHRGSLARILGN----DATAKELSWNRRINVIKGVANALSYLHHDCLPS 877 (1078)
Q Consensus 816 ---------l~~~~~~-----~~~~~lv~E~~~~g~L~~~l~~----~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ 877 (1078)
+..++.. ....+++|+++ +++|.++++. ......+++..++.++.||+.||+|||++ +
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ 231 (413)
T 3dzo_A 156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---G 231 (413)
T ss_dssp EEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred hcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---C
Confidence 1111111 22456777765 5799998841 12345688889999999999999999999 9
Q ss_pred cEecCCCCCCeeeCCCCcEEEecccccccccCCCCCceeecccccccccccc----------ccCCCCccchhHHHHHHH
Q 039595 878 IIHRDISSKNVLLDLEFEAHVSDFGIAKFVEPYSSNRTEFVGTFGYAAPEIA----------YTMRATEKYDVYSFGVLV 947 (1078)
Q Consensus 878 ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~sDvwSlG~il 947 (1078)
|+||||||+|||++.++.+||+|||+++..... ....+| +.|+|||++ .+..++.++|||||||++
T Consensus 232 iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~---~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil 307 (413)
T 3dzo_A 232 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS---AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI 307 (413)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETTEE---ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred cccCCcccceEEEecCCeEEEEeccceeecCCc---cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence 999999999999999999999999999865432 344567 999999998 555688999999999999
Q ss_pred HHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 948 FEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 948 ~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
|||++|+.||...... ... ...+.... ... ..+.+++.+||+.||++|||+.|+++|+|+..
T Consensus 308 ~elltg~~Pf~~~~~~--~~~------~~~~~~~~-----~~~---~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~ 369 (413)
T 3dzo_A 308 YWIWCADLPNTDDAAL--GGS------EWIFRSCK-----NIP---QPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ 369 (413)
T ss_dssp HHHHHSSCCCCTTGGG--SCS------GGGGSSCC-----CCC---HHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred HHHHHCCCCCCCcchh--hhH------HHHHhhcc-----cCC---HHHHHHHHHHccCChhhCcCHHHHHhCHHHHH
Confidence 9999999997643221 111 11111111 111 35788999999999999999999999999754
No 289
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.7e-33 Score=320.53 Aligned_cols=307 Identities=23% Similarity=0.365 Sum_probs=180.7
Q ss_pred cCCCCCCcEEeccCCcccccCCCCCCCCCCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccc
Q 039595 98 FSSFPHLVNLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIH 177 (1078)
Q Consensus 98 ~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~ 177 (1078)
+..+++|++|++++|.+.. +| .++.+++|++|+|++|++++. |. +..+++|++|+|++|.+++ +| .++.+++|+
T Consensus 40 ~~~l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~ 113 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLR 113 (347)
T ss_dssp HHHHTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCS
T ss_pred chhcccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccC-ch-HHcCCCcCC
Confidence 3456777888888887753 33 377778888888888877743 33 7778888888888877763 33 466677777
Q ss_pred eeecccccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccc
Q 039595 178 EFSFCHNNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNS 257 (1078)
Q Consensus 178 ~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 257 (1078)
+|++++|.+.+. |. +..+++|++|++++|...+.++ .+..+++|++|++++|.+++..+ +..+++|++|++++|+
T Consensus 114 ~L~l~~n~i~~~-~~-~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~ 188 (347)
T 4fmz_A 114 ELYLNEDNISDI-SP-LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQ 188 (347)
T ss_dssp EEECTTSCCCCC-GG-GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSC
T ss_pred EEECcCCcccCc-hh-hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCc
Confidence 777777766643 22 6666677777777665443333 36666666666666666665433 5666666666666666
Q ss_pred cCCCCCcccCCCcccceeecccccccCccccccccccCCceeeecccCCCCCCCccccCCCccCeeeccccccCccCCCC
Q 039595 258 LSGSIPSIIGNLKSLHQLDLIENQLSGSIPLSFGNLSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLNGVIPPS 337 (1078)
Q Consensus 258 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~ 337 (1078)
+.+..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|.++ +..+
T Consensus 189 l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~------------------------~~~~-- 238 (347)
T 4fmz_A 189 IEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKIT------------------------DLSP-- 238 (347)
T ss_dssp CCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCC------------------------CCGG--
T ss_pred cccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccC------------------------CCcc--
Confidence 664322 5566666666666666654433 444455555555555544 3322
Q ss_pred CCCCCcCcEEEccCccCCCCCCccccccCCCCeEEcccccCccccCCCCccCCCCceeecccCcCCCCCCccccccCCCC
Q 039595 338 IGNLSSLRNLSLFNNGLYGSIPEEIGYLKSLSELKLCKNNLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLKSLTSLK 417 (1078)
Q Consensus 338 l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~ 417 (1078)
+..+++|+.|++++|.+.+. ..+..+++|++|++++|++++. ..+..+++|+.|++++|++.+..+..+..+++|+
T Consensus 239 ~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~ 314 (347)
T 4fmz_A 239 LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLT 314 (347)
T ss_dssp GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCS
T ss_pred hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCC
Confidence 44444555555555544432 2344455555555555555433 2345555555555555555555555555555566
Q ss_pred eEEccCccccccchhhccCCCCCcEecCCCCccC
Q 039595 418 RVRFNQNNLVGKVYEAFGDHPNLTFLDLSQNNFD 451 (1078)
Q Consensus 418 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 451 (1078)
+|++++|.++++.+ +..+++|++|++++|.|+
T Consensus 315 ~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 315 TLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp EEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred EEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 66666666555544 555666777777777654
No 290
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=6.7e-35 Score=326.35 Aligned_cols=253 Identities=32% Similarity=0.504 Sum_probs=241.6
Q ss_pred CCcceeccCCCccCC--CCCccccCccceeEEEccC-ccCCCCCCcccccccccceeecccccccCCccCcccCCCCCcE
Q 039595 126 SKLQNLDLGNNQLSG--VISPEIGKLNQLRRLYLDM-NQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLAL 202 (1078)
Q Consensus 126 ~~L~~L~Ls~n~l~~--~~p~~~~~l~~L~~L~L~~-n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~ 202 (1078)
.++++|+|++|+++| .+|..|+++++|++|+|++ |.+++.+|..|+.+++|++|++++|.+++.+|..|+++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 478899999999999 8999999999999999995 9999999999999999999999999999999999999999999
Q ss_pred EEccCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCC-CCcEEeccccccCCCCCcccCCCcccceeeccccc
Q 039595 203 LYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLS-NLDTLFLYKNSLSGSIPSIIGNLKSLHQLDLIENQ 281 (1078)
Q Consensus 203 L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 281 (1078)
|+|++|.+++.+|..++++++|++|+|++|++++.+|..+..++ +|++|+|++|++++.+|..++.++ |++|+|++|+
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 99999999999999999999999999999999999999999998 999999999999999999999997 9999999999
Q ss_pred ccCccccccccccCCceeeecccCCCCCCCccccCCCccCeeeccccccCccCCCCCCCCCcCcEEEccCccCCCCCCcc
Q 039595 282 LSGSIPLSFGNLSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLNGVIPPSIGNLSSLRNLSLFNNGLYGSIPEE 361 (1078)
Q Consensus 282 l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 361 (1078)
+++..|..|..+++|+.|++++|.+++.+|. +..+++|++|+|++|++++.+|..+..+++|+.|++++|++++.+|..
T Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS
T ss_pred ccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC
Confidence 9999999999999999999999999987776 889999999999999999999999999999999999999999999986
Q ss_pred ccccCCCCeEEccccc-Cccc
Q 039595 362 IGYLKSLSELKLCKNN-LSGV 381 (1078)
Q Consensus 362 ~~~l~~L~~L~L~~N~-l~~~ 381 (1078)
..+++|+.|++++|+ +.|.
T Consensus 288 -~~l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 288 -GNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp -TTGGGSCGGGTCSSSEEEST
T ss_pred -ccccccChHHhcCCCCccCC
Confidence 889999999999998 6553
No 291
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.8e-34 Score=355.81 Aligned_cols=241 Identities=25% Similarity=0.360 Sum_probs=196.1
Q ss_pred hcCCCccceeccCCceeEEEEEeC--CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCe--
Q 039595 750 TDDFDEKFCIGKGGQGSVYKAELP--SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARH-- 825 (1078)
Q Consensus 750 ~~~~~~~~~lG~G~~g~V~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-- 825 (1078)
.++|++.+.||+|+||+||+|.+. +|+.||||++... ......+.+.+|+.++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~---~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 155 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS---GDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHG 155 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSS---CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTS
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCcc---CCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCC
Confidence 368999999999999999999764 6899999998643 234456678999999999999999999999976554
Q ss_pred ---eEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeccc
Q 039595 826 ---SFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFG 902 (1078)
Q Consensus 826 ---~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 902 (1078)
.|+||||+++++|.+++.. .+++.+++.++.||+.||.|||++ +|+||||||+||+++.+ .+||+|||
T Consensus 156 ~~~~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG 226 (681)
T 2pzi_A 156 DPVGYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLG 226 (681)
T ss_dssp CEEEEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCT
T ss_pred CceeEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecc
Confidence 6999999999999887732 689999999999999999999999 99999999999999875 99999999
Q ss_pred ccccccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCC
Q 039595 903 IAKFVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRL 982 (1078)
Q Consensus 903 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 982 (1078)
+++..... ....||+.|+|||++.+.. +.++|||||||++|||++|..||...... ..
T Consensus 227 ~a~~~~~~----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~-----------------~~ 284 (681)
T 2pzi_A 227 AVSRINSF----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVD-----------------GL 284 (681)
T ss_dssp TCEETTCC----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECS-----------------SC
T ss_pred cchhcccC----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccc-----------------cc
Confidence 99876542 4457999999999987654 89999999999999999998885421110 00
Q ss_pred CCCCCccHHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhhhh
Q 039595 983 STPSPGVMDKLISIMEVAILCLDESPEARPTMEKGFGHHIGYC 1025 (1078)
Q Consensus 983 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~~~ 1025 (1078)
.. ..........+.+++.+||++||++||+..+.+.|.|...
T Consensus 285 ~~-~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 285 PE-DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp CT-TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred cc-cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence 00 0111122346789999999999999999999998888654
No 292
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1e-32 Score=314.13 Aligned_cols=285 Identities=28% Similarity=0.420 Sum_probs=177.4
Q ss_pred CccceeEEEccCccCCCCCCcccccccccceeecccccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCee
Q 039595 148 KLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTL 227 (1078)
Q Consensus 148 ~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 227 (1078)
.+++|++|++++|.++ .+|. ++.+++|++|++++|.+++. |. +.++++|++|+|++|.+++. +.+.++++|++|
T Consensus 42 ~l~~L~~L~l~~~~i~-~~~~-~~~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~~L 115 (347)
T 4fmz_A 42 ELESITKLVVAGEKVA-SIQG-IEYLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITDI--SALQNLTNLREL 115 (347)
T ss_dssp HHTTCSEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCSEE
T ss_pred hcccccEEEEeCCccc-cchh-hhhcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccCc--hHHcCCCcCCEE
Confidence 3444444444444443 2222 34444444444444444422 22 55566666666666665532 245666666666
Q ss_pred ecCCcccCCCCCCcccCCCCCcEEeccccccCCCCCcccCCCcccceeecccccccCccccccccccCCceeeecccCCC
Q 039595 228 DLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLDLIENQLSGSIPLSFGNLSSWTLMSLFSNSLS 307 (1078)
Q Consensus 228 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~ 307 (1078)
+|++|++++..+ +..+++|++|++++|.....++ .+..+++|++|++++|.+.+..+ +..+++|+.|++++|.++
T Consensus 116 ~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~ 190 (347)
T 4fmz_A 116 YLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIE 190 (347)
T ss_dssp ECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCC
T ss_pred ECcCCcccCchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccc
Confidence 666666665422 5666666666666664443333 36666666666666666664433 556666666666666665
Q ss_pred CCCCccccCCCccCeeeccccccCccCCCCCCCCCcCcEEEccCccCCCCCCccccccCCCCeEEcccccCccccCCCCc
Q 039595 308 GSIPPILGNLKSLSTLGLYLNQLNGVIPPSIGNLSSLRNLSLFNNGLYGSIPEEIGYLKSLSELKLCKNNLSGVIPHSVG 387 (1078)
Q Consensus 308 ~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 387 (1078)
+..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|.+++..+ +..+++|++|++++|.+++. ..+.
T Consensus 191 ~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~ 262 (347)
T 4fmz_A 191 DISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVK 262 (347)
T ss_dssp CCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGT
T ss_pred cccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHh
Confidence 4332 6677778888888888776544 7777888888888888875433 77788888888888888754 3577
Q ss_pred cCCCCceeecccCcCCCCCCccccccCCCCeEEccCccccccchhhccCCCCCcEecCCCCccCCc
Q 039595 388 NLTGLVLLNMCENHLFGPIPKSLKSLTSLKRVRFNQNNLVGKVYEAFGDHPNLTFLDLSQNNFDGK 453 (1078)
Q Consensus 388 ~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 453 (1078)
.+++|++|++++|++.+. ..+..+++|++|++++|.+....+..|..+++|++|++++|++++.
T Consensus 263 ~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~ 326 (347)
T 4fmz_A 263 DLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDI 326 (347)
T ss_dssp TCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCC
T ss_pred cCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccc
Confidence 777888888888877654 3466677777777777777766666677777777777777766643
No 293
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=7.7e-34 Score=313.22 Aligned_cols=231 Identities=13% Similarity=0.081 Sum_probs=179.8
Q ss_pred cCCCccceeccCCceeEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEEE
Q 039595 751 DDFDEKFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFLV 829 (1078)
Q Consensus 751 ~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 829 (1078)
++|++.+.||+|+||.||+|... +++.||||++...... .....+.+.+|+..+++++||||+++++++.+++..|+|
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVL-PDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCS-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECccccc-CHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 57999999999999999999765 5899999999765322 344457889999999999999999999999999999999
Q ss_pred EeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccccccC
Q 039595 830 CEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVEP 909 (1078)
Q Consensus 830 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~~ 909 (1078)
|||++|++|.++++.. ....++.+++.|++.||+|||++ ||+||||||+||+++.+|.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~~-----~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~------- 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS-----PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA------- 174 (286)
T ss_dssp EECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC-------
T ss_pred EEecCCCCHHHHHhcC-----CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc-------
Confidence 9999999999999431 35567899999999999999999 99999999999999999999998543
Q ss_pred CCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCCcccccccchhhhhhhhhhhcCCCCCCCCCcc
Q 039595 910 YSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRDFFSINFSSFSNMIIEVNQILDPRLSTPSPGV 989 (1078)
Q Consensus 910 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 989 (1078)
|++ .++.++|||||||++|||+||+.||....... ....... .............
T Consensus 175 -------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~-~~~~~~~----~~~~~~~~~~~~~ 229 (286)
T 3uqc_A 175 -------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRS-GLAPAER----DTAGQPIEPADID 229 (286)
T ss_dssp -------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCC-CSEECCB----CTTSCBCCHHHHC
T ss_pred -------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcch-hhHHHHH----HhccCCCChhhcc
Confidence 333 37889999999999999999999976443211 0000000 0000000000000
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCChhHHHHHhhh
Q 039595 990 MDKLISIMEVAILCLDESPEARPTMEKGFGHHIG 1023 (1078)
Q Consensus 990 ~~~~~~l~~li~~cl~~dP~~RPt~~ell~h~~~ 1023 (1078)
......+.+++.+||+.||++| |++|+++....
T Consensus 230 ~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~ 262 (286)
T 3uqc_A 230 RDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQ 262 (286)
T ss_dssp TTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHH
Confidence 0111257889999999999999 99999987543
No 294
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=1.8e-32 Score=309.89 Aligned_cols=249 Identities=25% Similarity=0.300 Sum_probs=121.2
Q ss_pred cceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeecccccccCCccCcccCCCCCcEEEccC
Q 039595 128 LQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLYLNN 207 (1078)
Q Consensus 128 L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~ 207 (1078)
|+++++++++++ .+|..+. ++|++|+|++|.+++..|..++.+++|++|++++|.+++..|..|+++++|++|+|++
T Consensus 35 l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 111 (332)
T 2ft3_A 35 LRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISK 111 (332)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCS
T ss_pred CCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCC
Confidence 444444444443 3333332 3444444444444433333444444444444444444444444455555555555555
Q ss_pred CCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccC--CCCCcccCCCcccceeecccccccCc
Q 039595 208 NSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLS--GSIPSIIGNLKSLHQLDLIENQLSGS 285 (1078)
Q Consensus 208 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~ 285 (1078)
|+++ .+|..+. ++|++|++++|++++..+..|.++++|++|++++|.++ +..|..+..+ +|++|++++|++++
T Consensus 112 n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~- 186 (332)
T 2ft3_A 112 NHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG- 186 (332)
T ss_dssp SCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-
T ss_pred CcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-
Confidence 5554 2333332 45555555555555444444555555555555555553 2344445544 55555555555553
Q ss_pred cccccccccCCceeeecccCCCCCCCccccCCCccCeeeccccccCccCCCCCCCCCcCcEEEccCccCCCCCCcccccc
Q 039595 286 IPLSFGNLSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLNGVIPPSIGNLSSLRNLSLFNNGLYGSIPEEIGYL 365 (1078)
Q Consensus 286 ~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l 365 (1078)
+|..+. ++|+.|++++|.+++..+..+.++++|++|+|++|++++..+..+..+++|+.|++++|+++ .+|..+..+
T Consensus 187 l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l 263 (332)
T 2ft3_A 187 IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDL 263 (332)
T ss_dssp CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGC
T ss_pred cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcC
Confidence 232221 34444444444444444445555555555555555555544445555555555555555555 455555555
Q ss_pred CCCCeEEcccccCccccCCCCc
Q 039595 366 KSLSELKLCKNNLSGVIPHSVG 387 (1078)
Q Consensus 366 ~~L~~L~L~~N~l~~~~p~~~~ 387 (1078)
++|++|++++|++++..+..|.
T Consensus 264 ~~L~~L~l~~N~l~~~~~~~~~ 285 (332)
T 2ft3_A 264 KLLQVVYLHTNNITKVGVNDFC 285 (332)
T ss_dssp TTCCEEECCSSCCCBCCTTSSS
T ss_pred ccCCEEECCCCCCCccChhHcc
Confidence 5555555555555554444443
No 295
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2.7e-32 Score=308.52 Aligned_cols=289 Identities=21% Similarity=0.250 Sum_probs=223.2
Q ss_pred ccceeEEEccCccCCCCCCcccccccccceeecccccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeee
Q 039595 149 LNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLD 228 (1078)
Q Consensus 149 l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 228 (1078)
..+|+.++++++.++ .+|..+. ++|++|++++|.+.+..|..|+++++|++|+|++|++++..|..|+++++|++|+
T Consensus 32 ~c~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 108 (332)
T 2ft3_A 32 HCHLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLY 108 (332)
T ss_dssp EEETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEE
T ss_pred cccCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEE
Confidence 357899999999998 8888774 6899999999999987788899999999999999999988888999999999999
Q ss_pred cCCcccCCCCCCcccCCCCCcEEeccccccCCCCCcccCCCcccceeeccccccc--CccccccccccCCceeeecccCC
Q 039595 229 LSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLDLIENQLS--GSIPLSFGNLSSWTLMSLFSNSL 306 (1078)
Q Consensus 229 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~l~~n~l 306 (1078)
|++|+++. +|..+. ++|++|++++|++++..+..|.++++|+.|++++|.++ +..|..|..+ +|+.|++++|.+
T Consensus 109 L~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l 184 (332)
T 2ft3_A 109 ISKNHLVE-IPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKL 184 (332)
T ss_dssp CCSSCCCS-CCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBC
T ss_pred CCCCcCCc-cCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCC
Confidence 99999985 455554 78999999999999777777899999999999999986 4677777777 888888888888
Q ss_pred CCCCCccccCCCccCeeeccccccCccCCCCCCCCCcCcEEEccCccCCCCCCccccccCCCCeEEcccccCccccCCCC
Q 039595 307 SGSIPPILGNLKSLSTLGLYLNQLNGVIPPSIGNLSSLRNLSLFNNGLYGSIPEEIGYLKSLSELKLCKNNLSGVIPHSV 386 (1078)
Q Consensus 307 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 386 (1078)
++ +|..+. ++|++|++++|++++..+..+..+++|+.|++++|++.+..+..+..+++|++|+|++|+++ .+|..+
T Consensus 185 ~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l 260 (332)
T 2ft3_A 185 TG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGL 260 (332)
T ss_dssp SS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTG
T ss_pred Cc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhh
Confidence 75 454443 67888888888888777778888888888888888888777777888888888888888887 566667
Q ss_pred ccCCCCceeecccCcCCCCCCcccccc------CCCCeEEccCcccc--ccchhhccCCCCCcEecCCCC
Q 039595 387 GNLTGLVLLNMCENHLFGPIPKSLKSL------TSLKRVRFNQNNLV--GKVYEAFGDHPNLTFLDLSQN 448 (1078)
Q Consensus 387 ~~l~~L~~L~L~~N~l~~~~~~~l~~l------~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~Ls~N 448 (1078)
..+++|+.|++++|++++..+..|... ..|+.|++++|.+. .+.+..|..+++|+.|++++|
T Consensus 261 ~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n 330 (332)
T 2ft3_A 261 PDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNY 330 (332)
T ss_dssp GGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC---
T ss_pred hcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhcccc
Confidence 777888888888887777666665543 33455555555544 344444555555555555444
No 296
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=4.2e-32 Score=306.68 Aligned_cols=199 Identities=25% Similarity=0.309 Sum_probs=106.7
Q ss_pred CCCcEEeccCCcccccCCCCCCCCCCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeec
Q 039595 102 PHLVNLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSF 181 (1078)
Q Consensus 102 ~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l 181 (1078)
+.|++|+|++|.+.+..+..|+++++|++|+|++|++++..|..|+++++|++|+|++|+++ .+|..+. ++|++|++
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l 128 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRV 128 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEEC
Confidence 56677777777776655556777777777777777776666666777777777777777666 5555443 45555555
Q ss_pred ccccccCCccCcccCCCCCcEEEccCCCCCC--CCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccC
Q 039595 182 CHNNVSGRIPSSLGNLSKLALLYLNNNSLFG--YIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLS 259 (1078)
Q Consensus 182 ~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 259 (1078)
++|.+.+..+..++++++|++|++++|.+.. ..+..+.++++|++|++++|+++. +|..+. ++|++|++++|+++
T Consensus 129 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~ 205 (330)
T 1xku_A 129 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKIT 205 (330)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCC
T ss_pred CCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCC
Confidence 5555554444445555555555555555532 344445555555555555555543 232222 44444444444444
Q ss_pred CCCCcccCCCcccceeecccccccCccccccccccCCceeeecccCC
Q 039595 260 GSIPSIIGNLKSLHQLDLIENQLSGSIPLSFGNLSSWTLMSLFSNSL 306 (1078)
Q Consensus 260 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l 306 (1078)
+..|..|.++++|++|+|++|++++..+..|..+++|+.|++++|.+
T Consensus 206 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l 252 (330)
T 1xku_A 206 KVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKL 252 (330)
T ss_dssp EECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCC
T ss_pred ccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcC
Confidence 44444444444444444444444443333333333333333333333
No 297
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=9.3e-32 Score=303.83 Aligned_cols=250 Identities=23% Similarity=0.328 Sum_probs=144.7
Q ss_pred CCcEEeccCCcccccCCCCCCCCCCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeecc
Q 039595 103 HLVNLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFC 182 (1078)
Q Consensus 103 ~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~ 182 (1078)
+++.++++++.+. .+|..+. +.|++|+|++|++++..+..|+++++|++|+|++|++++..|..++.+++|++|+++
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 5677787777775 4565443 567777777777776655567777777777777777776556666666666666666
Q ss_pred cccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcccCC--CCCCcccCCCCCcEEeccccccCC
Q 039595 183 HNNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNG--LIPCTLDNLSNLDTLFLYKNSLSG 260 (1078)
Q Consensus 183 ~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~l~~l~~L~~L~L~~N~l~~ 260 (1078)
+|.++ .+|..+. ++|++|++++|++++..+..|.++++|++|++++|+++. ..+..|.++++|++|++++|+++.
T Consensus 109 ~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 185 (330)
T 1xku_A 109 KNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT 185 (330)
T ss_dssp SSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS
T ss_pred CCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc
Confidence 66665 4555443 566666666666665555556666666666666666542 445555555666666666665553
Q ss_pred CCCcccCCCcccceeecccccccCccccccccccCCceeeecccCCCCCCCccccCCCccCeeeccccccCccCCCCCCC
Q 039595 261 SIPSIIGNLKSLHQLDLIENQLSGSIPLSFGNLSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLNGVIPPSIGN 340 (1078)
Q Consensus 261 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~ 340 (1078)
+|..+. ++|++|++++|++++..|. .+.++++|++|+|++|++++..+..+..
T Consensus 186 -l~~~~~--~~L~~L~l~~n~l~~~~~~------------------------~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 238 (330)
T 1xku_A 186 -IPQGLP--PSLTELHLDGNKITKVDAA------------------------SLKGLNNLAKLGLSFNSISAVDNGSLAN 238 (330)
T ss_dssp -CCSSCC--TTCSEEECTTSCCCEECTG------------------------GGTTCTTCCEEECCSSCCCEECTTTGGG
T ss_pred -CCcccc--ccCCEEECCCCcCCccCHH------------------------HhcCCCCCCEEECCCCcCceeChhhccC
Confidence 333322 4555555555555444444 4444444444444444444444444445
Q ss_pred CCcCcEEEccCccCCCCCCccccccCCCCeEEcccccCccccCCCC
Q 039595 341 LSSLRNLSLFNNGLYGSIPEEIGYLKSLSELKLCKNNLSGVIPHSV 386 (1078)
Q Consensus 341 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 386 (1078)
+++|+.|++++|+++ .+|..+..+++|++|++++|++++..+..|
T Consensus 239 l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f 283 (330)
T 1xku_A 239 TPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDF 283 (330)
T ss_dssp STTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSS
T ss_pred CCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhc
Confidence 555555555555554 444445555555555555555554444433
No 298
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=3.9e-35 Score=348.07 Aligned_cols=355 Identities=19% Similarity=0.140 Sum_probs=185.8
Q ss_pred CCCCeeecCCcccCCCCCCc-ccCCCCCcEEeccccccCC----CCCcccCCCcccceeecccccccCccccccc-ccc-
Q 039595 222 KSLSTLDLSQNQLNGLIPCT-LDNLSNLDTLFLYKNSLSG----SIPSIIGNLKSLHQLDLIENQLSGSIPLSFG-NLS- 294 (1078)
Q Consensus 222 ~~L~~L~L~~N~l~~~~p~~-l~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~- 294 (1078)
++|++|+|++|+++...... +..+++|++|+|++|+++. .++..+..+++|++|+|++|.+++..+..+. .+.
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 56788888888877543332 6677888888888888773 3455667778888888888887654443332 233
Q ss_pred ---CCceeeecccCCCC----CCCccccCCCccCeeeccccccCccCCCCC-----CCCCcCcEEEccCccCCCCC----
Q 039595 295 ---SWTLMSLFSNSLSG----SIPPILGNLKSLSTLGLYLNQLNGVIPPSI-----GNLSSLRNLSLFNNGLYGSI---- 358 (1078)
Q Consensus 295 ---~L~~L~l~~n~l~~----~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l-----~~l~~L~~L~Ls~N~l~~~~---- 358 (1078)
+|+.|++++|.++. .++..+.++++|++|+|++|++++..+..+ ...++|+.|++++|++++..
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 46666666666663 345556666666666666666653322211 12345666666666655422
Q ss_pred CccccccCCCCeEEcccccCccccCCCCc-----cCCCCceeecccCcCCCC----CCccccccCCCCeEEccCcccccc
Q 039595 359 PEEIGYLKSLSELKLCKNNLSGVIPHSVG-----NLTGLVLLNMCENHLFGP----IPKSLKSLTSLKRVRFNQNNLVGK 429 (1078)
Q Consensus 359 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~L~~N~l~~~----~~~~l~~l~~L~~L~L~~N~l~~~ 429 (1078)
+..+..+++|++|++++|.++...+..+. ..++|+.|++++|.+++. ++..+..+++|++|++++|.+...
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~ 242 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDV 242 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHH
T ss_pred HHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChH
Confidence 33444455666666666655543332222 133555555555555442 233344444444444444444332
Q ss_pred ch-----hhccCCCCCcEecCCCCccCCccCccccCCCCCceecccccccCCCCCccccCCCcccEEeccCCccCCCccc
Q 039595 430 VY-----EAFGDHPNLTFLDLSQNNFDGKISFNWRNLPKLDTFIVSMNNIFGSIPLEIGDSSKLQFLDLSSNHIVGKIPV 504 (1078)
Q Consensus 430 ~~-----~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~ 504 (1078)
.. ..+..+++|++|++++|.++..... .++..+..+++|++|++++|.|++..+.
T Consensus 243 ~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~--------------------~l~~~l~~~~~L~~L~Ls~n~i~~~~~~ 302 (461)
T 1z7x_W 243 GMAELCPGLLHPSSRLRTLWIWECGITAKGCG--------------------DLCRVLRAKESLKELSLAGNELGDEGAR 302 (461)
T ss_dssp HHHHHHHHHTSTTCCCCEEECTTSCCCHHHHH--------------------HHHHHHHHCTTCCEEECTTCCCHHHHHH
T ss_pred HHHHHHHHHhcCCCCceEEECcCCCCCHHHHH--------------------HHHHHHhhCCCcceEECCCCCCchHHHH
Confidence 21 1111233444444444433321000 0233344455556666666655433333
Q ss_pred ccccC-----ccCcEEeccCCccCCC----cccccccccccceeeccCccccCCCCccccc-----ccccccccccCccc
Q 039595 505 QLEKL-----FSLNKLILSLNQLSGS----VPLEFGSLTELQYLDLSANKLSSSIPKSIGN-----LLKLYYLNLSNNQF 570 (1078)
Q Consensus 505 ~~~~l-----~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-----l~~L~~L~Ls~N~l 570 (1078)
.+... ++|++|+|++|.+++. ++..+..+++|++|+|++|.+++..+..+.. .++|++|+|++|++
T Consensus 303 ~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i 382 (461)
T 1z7x_W 303 LLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDV 382 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred HHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCC
Confidence 33221 4566666666655533 2344445556666666666555443333332 34566666666666
Q ss_pred cc----ccchhhhcccccCeeecCCCccCC
Q 039595 571 SH----TIPIEFEKLIHLSKLDLSHNILQE 596 (1078)
Q Consensus 571 ~~----~~~~~~~~l~~L~~L~Ls~N~l~~ 596 (1078)
++ .+|..+..+++|++|+|++|++++
T Consensus 383 ~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 383 SDSSCSSLAATLLANHSLRELDLSNNCLGD 412 (461)
T ss_dssp CHHHHHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred ChhhHHHHHHHHHhCCCccEEECCCCCCCH
Confidence 54 445555556666666666666554
No 299
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=1.3e-34 Score=343.56 Aligned_cols=377 Identities=19% Similarity=0.114 Sum_probs=219.7
Q ss_pred CCCcEEeccccccCCCCCc-ccCCCcccceeecccccccCc----cccccccccCCceeeecccCCCCCCCcc-ccCCCc
Q 039595 246 SNLDTLFLYKNSLSGSIPS-IIGNLKSLHQLDLIENQLSGS----IPLSFGNLSSWTLMSLFSNSLSGSIPPI-LGNLKS 319 (1078)
Q Consensus 246 ~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~n~l~~~~p~~-l~~l~~ 319 (1078)
++|++|+|++|+++..... .+..+++|++|+|++|.+++. ++..+..+++|+.|++++|.+++..+.. +..++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~- 81 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQ- 81 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTC-
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHh-
Confidence 4566666666666532222 255566666666666666532 3344444455555555555554322211 11222
Q ss_pred cCeeeccccccCccCCCCCCCCC-cCcEEEccCccCCC----CCCccccccCCCCeEEcccccCccccCCCCc-----cC
Q 039595 320 LSTLGLYLNQLNGVIPPSIGNLS-SLRNLSLFNNGLYG----SIPEEIGYLKSLSELKLCKNNLSGVIPHSVG-----NL 389 (1078)
Q Consensus 320 L~~L~L~~N~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-----~l 389 (1078)
... +|++|++++|.+++ .++..+..+++|++|+|++|.+++..+..+. ..
T Consensus 82 --------------------~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~ 141 (461)
T 1z7x_W 82 --------------------TPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQ 141 (461)
T ss_dssp --------------------STTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTT
T ss_pred --------------------hCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCC
Confidence 000 34455555554442 2344444455555555555554432222111 13
Q ss_pred CCCceeecccCcCCCCC----CccccccCCCCeEEccCccccccchhhcc-----CCCCCcEecCCCCccCCcc----Cc
Q 039595 390 TGLVLLNMCENHLFGPI----PKSLKSLTSLKRVRFNQNNLVGKVYEAFG-----DHPNLTFLDLSQNNFDGKI----SF 456 (1078)
Q Consensus 390 ~~L~~L~L~~N~l~~~~----~~~l~~l~~L~~L~L~~N~l~~~~~~~~~-----~l~~L~~L~Ls~N~l~~~~----~~ 456 (1078)
++|++|++++|++++.. +..+..+++|++|++++|.+.......+. ..++|++|++++|.++... +.
T Consensus 142 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~ 221 (461)
T 1z7x_W 142 CRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCG 221 (461)
T ss_dssp CCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHH
T ss_pred CcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHH
Confidence 34555555555554422 33444455566666666655444333332 2446666666666665432 33
Q ss_pred cccCCCCCceecccccccCCCC-----CccccCCCcccEEeccCCccCCC----cccccccCccCcEEeccCCccCCCcc
Q 039595 457 NWRNLPKLDTFIVSMNNIFGSI-----PLEIGDSSKLQFLDLSSNHIVGK----IPVQLEKLFSLNKLILSLNQLSGSVP 527 (1078)
Q Consensus 457 ~~~~l~~L~~L~l~~N~i~~~~-----~~~~~~l~~L~~L~Ls~N~i~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~ 527 (1078)
.+..+++|++|++++|.+.+.. +..+..+++|++|++++|+|++. ++..+..+++|++|+|++|++++..+
T Consensus 222 ~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~ 301 (461)
T 1z7x_W 222 IVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGA 301 (461)
T ss_dssp HHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHH
T ss_pred HHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHH
Confidence 3445566666666666554432 22233577888888888888754 56667778889999999988875544
Q ss_pred cccccc-----cccceeeccCccccCC----CCcccccccccccccccCcccccccchhhhc-----ccccCeeecCCCc
Q 039595 528 LEFGSL-----TELQYLDLSANKLSSS----IPKSIGNLLKLYYLNLSNNQFSHTIPIEFEK-----LIHLSKLDLSHNI 593 (1078)
Q Consensus 528 ~~~~~l-----~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-----l~~L~~L~Ls~N~ 593 (1078)
..+... ++|++|+|++|.+++. ++..+..+++|++|+|++|++++..+..+.. .++|+.|+|++|+
T Consensus 302 ~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~ 381 (461)
T 1z7x_W 302 RLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCD 381 (461)
T ss_dssp HHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSC
T ss_pred HHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCC
Confidence 444332 6888889988888765 3455666788888888888887766665543 5688888888888
Q ss_pred cCC----cCCCCcccccccceeeccCccccCCcccccc-----cCCcCcEEEcccCcCC
Q 039595 594 LQE----EIPPQVCNMESLEKLNLSHNNLSGFIPRCFE-----KMRSLSCIDICYNELQ 643 (1078)
Q Consensus 594 l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~-----~l~~L~~l~l~~N~l~ 643 (1078)
+++ .++..+..+++|++|+|++|++++.....+. ...+|+.|++.+|.+.
T Consensus 382 i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~~ 440 (461)
T 1z7x_W 382 VSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWS 440 (461)
T ss_dssp CCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCC
T ss_pred CChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeecccccC
Confidence 875 5666777788888888888888755333332 2345777777776655
No 300
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=2.3e-31 Score=303.54 Aligned_cols=283 Identities=19% Similarity=0.199 Sum_probs=176.7
Q ss_pred CCCCcccceEeeCCCCeEEEeccCccccCCcccCCccCCCCCCcEEeccCCcccccCCCCCCCCCCcceeccCCCccCCC
Q 039595 62 ISPCSWFGISCNHAGSRVISINLSTLCLNGTFQDFSFSSFPHLVNLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLSGV 141 (1078)
Q Consensus 62 ~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~ 141 (1078)
..+|.|.|+ |+-...+++. ++. .-.++|++|+|++|.+.+..+..++++++|++|+|++|++++.
T Consensus 27 ~~~C~~~~~-c~~~~~~l~~-----------iP~---~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~ 91 (353)
T 2z80_A 27 SLSCDRNGI-CKGSSGSLNS-----------IPS---GLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTI 91 (353)
T ss_dssp CCEECTTSE-EECCSTTCSS-----------CCT---TCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEE
T ss_pred CCCCCCCeE-eeCCCCCccc-----------ccc---cccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCcc
Confidence 567999998 8754332221 111 2235788888888888766666788888888888888888876
Q ss_pred CCccccCccceeEEEccCccCCCCCCcccccccccceeecccccccCCcc-CcccCCCCCcEEEccCC-CCCCCCCCccc
Q 039595 142 ISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIP-SSLGNLSKLALLYLNNN-SLFGYIPTVMG 219 (1078)
Q Consensus 142 ~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p-~~l~~l~~L~~L~L~~n-~l~~~~p~~~~ 219 (1078)
.|..|+++++|++|+|++|++++..+..++.+++|++|++++|.+++..+ ..++++++|++|++++| .+.+..|..|+
T Consensus 92 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~ 171 (353)
T 2z80_A 92 EEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFA 171 (353)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTT
T ss_pred CHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHcc
Confidence 67778888888888888888874333346777777777777777764322 36677777777777777 35544556677
Q ss_pred ccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCCCCcccCCCcccceeecccccccCccccccccccCCcee
Q 039595 220 NLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLDLIENQLSGSIPLSFGNLSSWTLM 299 (1078)
Q Consensus 220 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 299 (1078)
++++|++|++++|++++..|..|.++++|++|++++|+++...+..+..+++|+.|++++|++++..+..+..
T Consensus 172 ~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~------- 244 (353)
T 2z80_A 172 GLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELST------- 244 (353)
T ss_dssp TCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC-----------
T ss_pred CCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccccccccccc-------
Confidence 7777777777777777666667777777777777777765333333445666777777777766554433221
Q ss_pred eecccCCCCCCCccccCCCccCeeeccccccCc----cCCCCCCCCCcCcEEEccCccCCCCCCcc-ccccCCCCeEEcc
Q 039595 300 SLFSNSLSGSIPPILGNLKSLSTLGLYLNQLNG----VIPPSIGNLSSLRNLSLFNNGLYGSIPEE-IGYLKSLSELKLC 374 (1078)
Q Consensus 300 ~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~L~ 374 (1078)
......++.++|+++.+++ .+|..+..+++|+.|++++|+++ .+|.. |..+++|++|+|+
T Consensus 245 --------------~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~ 309 (353)
T 2z80_A 245 --------------GETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLH 309 (353)
T ss_dssp ----------------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECC
T ss_pred --------------ccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEee
Confidence 1123334444444444443 23445555666666666666666 33333 4566666666666
Q ss_pred cccCccc
Q 039595 375 KNNLSGV 381 (1078)
Q Consensus 375 ~N~l~~~ 381 (1078)
+|++.+.
T Consensus 310 ~N~~~~~ 316 (353)
T 2z80_A 310 TNPWDCS 316 (353)
T ss_dssp SSCBCCC
T ss_pred CCCccCc
Confidence 6666543
No 301
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=1.1e-30 Score=291.78 Aligned_cols=286 Identities=22% Similarity=0.239 Sum_probs=166.9
Q ss_pred CCCcccceEeeCCCCeEEEeccCccccCCcccCCccCCCCCCcEEeccCCcccccCCCCCCCCCCcceeccCCCccCC--
Q 039595 63 SPCSWFGISCNHAGSRVISINLSTLCLNGTFQDFSFSSFPHLVNLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLSG-- 140 (1078)
Q Consensus 63 ~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~-- 140 (1078)
..|.|.+|.|+..+ ++. ++ ..-.++|++|+|++|.+....+..|+++++|++|+|++|+++.
T Consensus 5 C~C~~~~l~c~~~~--l~~-----------ip---~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~ 68 (306)
T 2z66_A 5 CSCSGTEIRCNSKG--LTS-----------VP---TGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKG 68 (306)
T ss_dssp CEEETTEEECCSSC--CSS-----------CC---SCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEE
T ss_pred CeeCCCEEEcCCCC--ccc-----------CC---CCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCccc
Confidence 34899999997532 111 11 1123567777777777764333346777777777777777762
Q ss_pred CCCccccCccceeEEEccCccCCCCCCcccccccccceeecccccccCCcc-CcccCCCCCcEEEccCCCCCCCCCCccc
Q 039595 141 VISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIP-SSLGNLSKLALLYLNNNSLFGYIPTVMG 219 (1078)
Q Consensus 141 ~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p-~~l~~l~~L~~L~L~~n~l~~~~p~~~~ 219 (1078)
.+|..+..+++|++|+|++|.++ .+|..+..+++|++|++++|.+.+..+ ..+..+++|++|++++|.+++..|..+.
T Consensus 69 ~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 147 (306)
T 2z66_A 69 CCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFN 147 (306)
T ss_dssp EEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTT
T ss_pred CcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcc
Confidence 23555666777777777777666 455556566666666666666554433 3455555555555555555555555555
Q ss_pred ccCCCCeeecCCcccCC-CCCCcccCCCCCcEEeccccccCCCCCcccCCCcccceeecccccccCccccccccccCCce
Q 039595 220 NLKSLSTLDLSQNQLNG-LIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLDLIENQLSGSIPLSFGNLSSWTL 298 (1078)
Q Consensus 220 ~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 298 (1078)
++++|++|+|++|++++ .+|..+..+++|++|+|++|++++..|..|.++++|++|+|++|++
T Consensus 148 ~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l---------------- 211 (306)
T 2z66_A 148 GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNF---------------- 211 (306)
T ss_dssp TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCC----------------
T ss_pred cCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCcc----------------
Confidence 55555555555555554 3444555555555555555555544444455555555555555544
Q ss_pred eeecccCCCCCCCccccCCCccCeeeccccccCccCCCCCCCC-CcCcEEEccCccCCCCCC--ccccccCCCCeEEccc
Q 039595 299 MSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLNGVIPPSIGNL-SSLRNLSLFNNGLYGSIP--EEIGYLKSLSELKLCK 375 (1078)
Q Consensus 299 L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l-~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~L~~ 375 (1078)
++..+..+..+++|++|+|++|++++..|..+..+ ++|+.|++++|.+.+..+ .....+.+.+.+.+..
T Consensus 212 --------~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~ 283 (306)
T 2z66_A 212 --------FSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEV 283 (306)
T ss_dssp --------SBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCG
T ss_pred --------CccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccc
Confidence 44444456666677777777777776667677766 377777777777765322 1122344455556666
Q ss_pred ccCccccCCCCccC
Q 039595 376 NNLSGVIPHSVGNL 389 (1078)
Q Consensus 376 N~l~~~~p~~~~~l 389 (1078)
+.+....|..+.+.
T Consensus 284 ~~~~C~~p~~~~g~ 297 (306)
T 2z66_A 284 ERMECATPSDKQGM 297 (306)
T ss_dssp GGCBEEESGGGTTC
T ss_pred cccccCCchhhCCc
Confidence 77777667665543
No 302
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=6.8e-33 Score=339.78 Aligned_cols=448 Identities=16% Similarity=0.153 Sum_probs=266.4
Q ss_pred CCcccceEeeCCCCeEEEeccCccccCCcccCCccCCCCCCcEEeccCCcc---cccCCCCCC------------CCCCc
Q 039595 64 PCSWFGISCNHAGSRVISINLSTLCLNGTFQDFSFSSFPHLVNLNLSFNLF---FGNIPPQIG------------NLSKL 128 (1078)
Q Consensus 64 ~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~L~~n~~---~~~~p~~~~------------~l~~L 128 (1078)
|++|.+|.+... .++. + . .+.. ..++..+.++++|++|+|+++.. .+.+|..++ ++++|
T Consensus 41 ck~W~~~~~~~~-~~l~-~--~-~~~~-~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L 114 (592)
T 3ogk_B 41 CRRWFKIDSETR-EHVT-M--A-LCYT-ATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQL 114 (592)
T ss_dssp CHHHHHHHHHHC-CEEE-E--S-CGGG-SCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTC
T ss_pred hHHHHHhhhccc-cEEE-E--e-eccc-cChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCC
Confidence 558999965422 2332 2 1 1111 12233456788999999988643 245665555 67888
Q ss_pred ceeccCCCccCCCCCccccCc--cceeEEEccCcc-CCC-CCCcccccccccceeecccccccCC----ccCcccCCCCC
Q 039595 129 QNLDLGNNQLSGVISPEIGKL--NQLRRLYLDMNQ-LHG-TIPPVIGQLSLIHEFSFCHNNVSGR----IPSSLGNLSKL 200 (1078)
Q Consensus 129 ~~L~Ls~n~l~~~~p~~~~~l--~~L~~L~L~~n~-l~~-~~p~~i~~l~~L~~L~l~~n~~~~~----~p~~l~~l~~L 200 (1078)
++|+|++|.+++..+..++.+ .+|++|+|++|. ++. .++..+..+++|++|+|++|.+++. ++..+.++++|
T Consensus 115 ~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L 194 (592)
T 3ogk_B 115 KSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSL 194 (592)
T ss_dssp CEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCC
T ss_pred CeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCc
Confidence 888888888776666666664 448888888776 221 1233334678888888888877655 44455677888
Q ss_pred cEEEccCCCCCCC----CCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccC---CCCCcccCCCcccc
Q 039595 201 ALLYLNNNSLFGY----IPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLS---GSIPSIIGNLKSLH 273 (1078)
Q Consensus 201 ~~L~L~~n~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~---~~~p~~~~~l~~L~ 273 (1078)
++|+|++|.+++. ++..+.++++|++|+|++|.+.+ +|..+.++++|++|+++++... +..+..+..+++|+
T Consensus 195 ~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~ 273 (592)
T 3ogk_B 195 EVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLC 273 (592)
T ss_dssp CEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCC
T ss_pred cEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhcccccc
Confidence 8888888887632 33345567888888888888776 4667777888888888754332 23345567777788
Q ss_pred eeecccccccCccccccccccCCceeeecccCCCCCCC-ccccCCCccCeeeccccccC-ccCCCCCCCCCcCcEEEccC
Q 039595 274 QLDLIENQLSGSIPLSFGNLSSWTLMSLFSNSLSGSIP-PILGNLKSLSTLGLYLNQLN-GVIPPSIGNLSSLRNLSLFN 351 (1078)
Q Consensus 274 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p-~~l~~l~~L~~L~L~~N~l~-~~~p~~l~~l~~L~~L~Ls~ 351 (1078)
.|+++++. .+.+|..+..+++|+.|++++|.+++... ..+.++++|++|+++ +.+. +.++..+..+++|+.|++++
T Consensus 274 ~L~l~~~~-~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~ 351 (592)
T 3ogk_B 274 RLGLSYMG-PNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIER 351 (592)
T ss_dssp EEEETTCC-TTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEEC
T ss_pred ccCccccc-hhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeec
Confidence 88777753 33566667777777777777777654332 335677777777777 3332 22233334566677777772
Q ss_pred -----------ccCCCCC-CccccccCCCCeEEcccccCccccCCCCcc-CCCCceeecc----cCcCCCC-----CCcc
Q 039595 352 -----------NGLYGSI-PEEIGYLKSLSELKLCKNNLSGVIPHSVGN-LTGLVLLNMC----ENHLFGP-----IPKS 409 (1078)
Q Consensus 352 -----------N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~L~----~N~l~~~-----~~~~ 409 (1078)
|.+++.. +.....+++|++|+++.|++++..+..+.. +++|+.|+++ .|.+++. ++..
T Consensus 352 g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~ 431 (592)
T 3ogk_B 352 GADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSL 431 (592)
T ss_dssp CCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHH
T ss_pred CccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHH
Confidence 4444321 222334667777777666666555544443 6666676664 4555543 2223
Q ss_pred ccccCCCCeEEccCcc--ccccchhhcc-CCCCCcEecCCCCccCCccCccccCCCCCceecccccccCCCCCccccCCC
Q 039595 410 LKSLTSLKRVRFNQNN--LVGKVYEAFG-DHPNLTFLDLSQNNFDGKISFNWRNLPKLDTFIVSMNNIFGSIPLEIGDSS 486 (1078)
Q Consensus 410 l~~l~~L~~L~L~~N~--l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~ 486 (1078)
+.++++|++|+++.|. ++......+. .+++|++|++++|++++. .++..+..++
T Consensus 432 ~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~-----------------------~~~~~~~~~~ 488 (592)
T 3ogk_B 432 LIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDE-----------------------GLMEFSRGCP 488 (592)
T ss_dssp HHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHH-----------------------HHHHHHTCCT
T ss_pred HHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHH-----------------------HHHHHHhcCc
Confidence 4455556666654322 3333322222 244555555555544321 2233345567
Q ss_pred cccEEeccCCccCCC-cccccccCccCcEEeccCCccCCCccccc-ccccccceeeccC
Q 039595 487 KLQFLDLSSNHIVGK-IPVQLEKLFSLNKLILSLNQLSGSVPLEF-GSLTELQYLDLSA 543 (1078)
Q Consensus 487 ~L~~L~Ls~N~i~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~Ls~ 543 (1078)
+|++|+|++|.|++. ++..+..+++|++|+|++|++++.....+ ..++.+....+..
T Consensus 489 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~ 547 (592)
T 3ogk_B 489 NLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPS 547 (592)
T ss_dssp TCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECC
T ss_pred ccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecC
Confidence 777777777776543 23334567777777777777775433323 2445555544443
No 303
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=8e-30 Score=290.81 Aligned_cols=274 Identities=19% Similarity=0.191 Sum_probs=153.8
Q ss_pred EEeccCCcccccCCCCCCCCCCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeeccccc
Q 039595 106 NLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNN 185 (1078)
Q Consensus 106 ~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~ 185 (1078)
..++++|.++ .+|..+. ++|++|+|++|++++..+..|+++++|++|+|++|++++
T Consensus 35 ~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~--------------------- 90 (353)
T 2z80_A 35 ICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINT--------------------- 90 (353)
T ss_dssp EEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCE---------------------
T ss_pred EeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCc---------------------
Confidence 3555555554 3444333 355555555555554333345555555555555555554
Q ss_pred ccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcccCCCCC-CcccCCCCCcEEecccc-ccCCCCC
Q 039595 186 VSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIP-CTLDNLSNLDTLFLYKN-SLSGSIP 263 (1078)
Q Consensus 186 ~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N-~l~~~~p 263 (1078)
..|..|+++++|++|+|++|++++..+..|+++++|++|+|++|++++..+ ..|.++++|++|++++| .+.+..|
T Consensus 91 ---~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~ 167 (353)
T 2z80_A 91 ---IEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQR 167 (353)
T ss_dssp ---ECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECT
T ss_pred ---cCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCH
Confidence 334444555555555555555543333334555555555555555553322 24555555555555555 2443334
Q ss_pred cccCCCcccceeecccccccCccccccccccCCceeeecccCCCCCCCccccCCCccCeeeccccccCccCCCCCC---C
Q 039595 264 SIIGNLKSLHQLDLIENQLSGSIPLSFGNLSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLNGVIPPSIG---N 340 (1078)
Q Consensus 264 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~---~ 340 (1078)
..|+++++|++|++++|++++..|..|..+++|+.|++++|.++...+..+..+++|++|++++|++++..+..+. .
T Consensus 168 ~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~ 247 (353)
T 2z80_A 168 KDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGET 247 (353)
T ss_dssp TTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------C
T ss_pred HHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccc
Confidence 4555555555555555555555555555555555555555555432223344466666666666666654443332 3
Q ss_pred CCcCcEEEccCccCCC----CCCccccccCCCCeEEcccccCccccCCCCccCCCCceeecccCcCCCCC
Q 039595 341 LSSLRNLSLFNNGLYG----SIPEEIGYLKSLSELKLCKNNLSGVIPHSVGNLTGLVLLNMCENHLFGPI 406 (1078)
Q Consensus 341 l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 406 (1078)
...++.++++++.+.+ .+|..+..+++|++|++++|+++...+..|.++++|++|++++|++.+..
T Consensus 248 ~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~ 317 (353)
T 2z80_A 248 NSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 317 (353)
T ss_dssp CCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred cchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcC
Confidence 5567788888887765 36777888888888888888888554444678888888888888877644
No 304
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=1e-29 Score=283.90 Aligned_cols=283 Identities=22% Similarity=0.228 Sum_probs=191.0
Q ss_pred EEeccCCcccccCCCCCCCCCCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeeccccc
Q 039595 106 NLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNN 185 (1078)
Q Consensus 106 ~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~ 185 (1078)
.++.+++.++ .+|..+. ++|++|+|++|+++...+..|+++++|++|+|++|.++..
T Consensus 11 ~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-------------------- 67 (306)
T 2z66_A 11 EIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFK-------------------- 67 (306)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEE--------------------
T ss_pred EEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcc--------------------
Confidence 3555556664 4555443 5777777777777743333467777777777777776621
Q ss_pred ccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcccCCCCC-CcccCCCCCcEEeccccccCCCCCc
Q 039595 186 VSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIP-CTLDNLSNLDTLFLYKNSLSGSIPS 264 (1078)
Q Consensus 186 ~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~p~ 264 (1078)
+.+|..+..+++|++|+|++|.++ .+|..+.++++|++|++++|++++..+ ..+..+++|++|++++|++++..|.
T Consensus 68 --~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 144 (306)
T 2z66_A 68 --GCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNG 144 (306)
T ss_dssp --EEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTT
T ss_pred --cCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchh
Confidence 111333344455555555555554 234445555555555555555554433 3555666666666666666655566
Q ss_pred ccCCCcccceeecccccccC-ccccccccccCCceeeecccCCCCCCCccccCCCccCeeeccccccCccCCCCCCCCCc
Q 039595 265 IIGNLKSLHQLDLIENQLSG-SIPLSFGNLSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLNGVIPPSIGNLSS 343 (1078)
Q Consensus 265 ~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 343 (1078)
.+.++++|++|+|++|.+++ ..|..|..+++|+.|++++|.+++..|..+.++++|++|+|++|++++..+..+..+++
T Consensus 145 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 224 (306)
T 2z66_A 145 IFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNS 224 (306)
T ss_dssp TTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTT
T ss_pred hcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCccc
Confidence 66666666666666666665 45666667777777777777777667788899999999999999999887778999999
Q ss_pred CcEEEccCccCCCCCCccccccC-CCCeEEcccccCccccC--CCCccCCCCceeecccCcCCCCCCccccccC
Q 039595 344 LRNLSLFNNGLYGSIPEEIGYLK-SLSELKLCKNNLSGVIP--HSVGNLTGLVLLNMCENHLFGPIPKSLKSLT 414 (1078)
Q Consensus 344 L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~ 414 (1078)
|+.|++++|++.+..|..+..++ +|++|+|++|.+++..+ ....-+...+.+....+.+....|..+.+.+
T Consensus 225 L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~~~g~~ 298 (306)
T 2z66_A 225 LQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDKQGMP 298 (306)
T ss_dssp CCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESGGGTTCB
T ss_pred CCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCchhhCCce
Confidence 99999999999999999999984 99999999999986432 1122334455566667777777777766543
No 305
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=5.6e-32 Score=331.67 Aligned_cols=232 Identities=13% Similarity=0.086 Sum_probs=122.4
Q ss_pred CCCcccccccccceeecccccc---cCCccCccc------------CCCCCcEEEccCCCCCCCCCCccccc--CCCCee
Q 039595 165 TIPPVIGQLSLIHEFSFCHNNV---SGRIPSSLG------------NLSKLALLYLNNNSLFGYIPTVMGNL--KSLSTL 227 (1078)
Q Consensus 165 ~~p~~i~~l~~L~~L~l~~n~~---~~~~p~~l~------------~l~~L~~L~L~~n~l~~~~p~~~~~l--~~L~~L 227 (1078)
.++..+..+++|++|+++++.. .+.+|..++ ++++|++|+|++|.+++..+..++.. ++|++|
T Consensus 64 ~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L 143 (592)
T 3ogk_B 64 TPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETL 143 (592)
T ss_dssp CHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEE
T ss_pred ChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEE
Confidence 3344556777788888876432 234444333 56777777777776665544555543 347777
Q ss_pred ecCCcc-cCC-CCCCcccCCCCCcEEeccccccCCC----CCcccCCCcccceeecccccccC----ccccccccccCCc
Q 039595 228 DLSQNQ-LNG-LIPCTLDNLSNLDTLFLYKNSLSGS----IPSIIGNLKSLHQLDLIENQLSG----SIPLSFGNLSSWT 297 (1078)
Q Consensus 228 ~L~~N~-l~~-~~p~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~ 297 (1078)
+|++|. ++. .++....++++|++|+|++|.+++. ++..+.++++|+.|++++|.+++ .++..+.++++|+
T Consensus 144 ~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~ 223 (592)
T 3ogk_B 144 KLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLV 223 (592)
T ss_dssp EEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCC
T ss_pred ECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCc
Confidence 777665 211 1112223566777777777766544 22334456667777777666652 2333445556666
Q ss_pred eeeecccCCCCCCCccccCCCccCeeeccccccC---ccCCCCCCCCCcCcEEEccCccCCCCCCccccccCCCCeEEcc
Q 039595 298 LMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLN---GVIPPSIGNLSSLRNLSLFNNGLYGSIPEEIGYLKSLSELKLC 374 (1078)
Q Consensus 298 ~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~---~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 374 (1078)
.|++++|.+.+ +|..+.++++|+.|+++.+... +..+..+..+++|+.|+++++... .+|..+..+++|++|+|+
T Consensus 224 ~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls 301 (592)
T 3ogk_B 224 SVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLL 301 (592)
T ss_dssp EEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEET
T ss_pred EEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcEEecC
Confidence 66666666554 4455566666666666542221 122334445555555555554322 344445555555555555
Q ss_pred cccCccccC-CCCccCCCCceeecc
Q 039595 375 KNNLSGVIP-HSVGNLTGLVLLNMC 398 (1078)
Q Consensus 375 ~N~l~~~~p-~~~~~l~~L~~L~L~ 398 (1078)
+|.+++... ..+.++++|+.|+++
T Consensus 302 ~~~l~~~~~~~~~~~~~~L~~L~L~ 326 (592)
T 3ogk_B 302 YALLETEDHCTLIQKCPNLEVLETR 326 (592)
T ss_dssp TCCCCHHHHHHHHTTCTTCCEEEEE
T ss_pred CCcCCHHHHHHHHHhCcCCCEEecc
Confidence 555433221 112344444444444
No 306
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=3.6e-29 Score=281.53 Aligned_cols=235 Identities=20% Similarity=0.262 Sum_probs=178.1
Q ss_pred CCCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeecccccccCCccCcccCCCCCcEEE
Q 039595 125 LSKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLY 204 (1078)
Q Consensus 125 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~ 204 (1078)
.+++++|+|++|+++ .+|..++++++|++|+|++|.++ .+|..++.+++|++|+|++|.++ .+|..++++++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 578999999999998 78888999999999999999998 88988888999999999998888 7788888888888888
Q ss_pred ccCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCCCCcccCCCcccceeecccccccC
Q 039595 205 LNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLDLIENQLSG 284 (1078)
Q Consensus 205 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 284 (1078)
|++|++.+.+|..++.. ..+..|.++++|++|+|++|+++ .+|..++++++|++|+|++|++++
T Consensus 157 L~~n~~~~~~p~~~~~~---------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~ 220 (328)
T 4fcg_A 157 IRACPELTELPEPLAST---------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA 220 (328)
T ss_dssp EEEETTCCCCCSCSEEE---------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC
T ss_pred CCCCCCccccChhHhhc---------------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc
Confidence 88888888888766541 01223445666666666666666 555566666666666666666664
Q ss_pred ccccccccccCCceeeecccCCCCCCCccccCCCccCeeeccccccCccCCCCCCCCCcCcEEEccCccCCCCCCccccc
Q 039595 285 SIPLSFGNLSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLNGVIPPSIGNLSSLRNLSLFNNGLYGSIPEEIGY 364 (1078)
Q Consensus 285 ~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~ 364 (1078)
+|..++.+++|+.|++++|.+.+.+|..++++++|++|+|++|++.+.+|..+.++++|+.|+|++|.+.+.+|..++.
T Consensus 221 -l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~ 299 (328)
T 4fcg_A 221 -LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQ 299 (328)
T ss_dssp -CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGG
T ss_pred -CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhh
Confidence 3445666666666666666666667777777777777777777777777777777888888888888877788888888
Q ss_pred cCCCCeEEcccccCc
Q 039595 365 LKSLSELKLCKNNLS 379 (1078)
Q Consensus 365 l~~L~~L~L~~N~l~ 379 (1078)
+++|+.+++..|.+.
T Consensus 300 L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 300 LPANCIILVPPHLQA 314 (328)
T ss_dssp SCTTCEEECCGGGSC
T ss_pred ccCceEEeCCHHHHH
Confidence 888888887776665
No 307
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=8e-31 Score=293.34 Aligned_cols=251 Identities=20% Similarity=0.180 Sum_probs=131.0
Q ss_pred CCCCcEEeccCCcccccCCCCCCCCCCcceeccCCCcc-CCCCCcccc-------CccceeEEEccCccCCCCCCccc--
Q 039595 101 FPHLVNLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQL-SGVISPEIG-------KLNQLRRLYLDMNQLHGTIPPVI-- 170 (1078)
Q Consensus 101 l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l-~~~~p~~~~-------~l~~L~~L~L~~n~l~~~~p~~i-- 170 (1078)
.+.|++|++++|.+ .+|..+... |++|+|++|.+ .+.+|..+. ++++|++|+|++|++++.+|..+
T Consensus 42 ~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 117 (312)
T 1wwl_A 42 GRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLE 117 (312)
T ss_dssp EEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSS
T ss_pred CCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHH
Confidence 34455555555555 445444433 55555555555 233444443 45555555555555555555443
Q ss_pred ccccccceeecccccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcE
Q 039595 171 GQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDT 250 (1078)
Q Consensus 171 ~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 250 (1078)
+.+++|++|++++|.+++. |..++.+.. ..+++|++|+|++|++++..|..|+++++|++
T Consensus 118 ~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~-------------------~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 177 (312)
T 1wwl_A 118 ATGPDLNILNLRNVSWATR-DAWLAELQQ-------------------WLKPGLKVLSIAQAHSLNFSCEQVRVFPALST 177 (312)
T ss_dssp CCSCCCSEEEEESCBCSSS-SSHHHHHHT-------------------TCCTTCCEEEEESCSCCCCCTTTCCCCSSCCE
T ss_pred hcCCCccEEEccCCCCcch-hHHHHHHHH-------------------hhcCCCcEEEeeCCCCccchHHHhccCCCCCE
Confidence 4444455555554444443 444444400 00044555555555555444444555555555
Q ss_pred EeccccccCCC--CCccc--CCCcccceeecccccccCc--cc-cccccccCCceeeecccCCCCCCC-ccccCCCccCe
Q 039595 251 LFLYKNSLSGS--IPSII--GNLKSLHQLDLIENQLSGS--IP-LSFGNLSSWTLMSLFSNSLSGSIP-PILGNLKSLST 322 (1078)
Q Consensus 251 L~L~~N~l~~~--~p~~~--~~l~~L~~L~Ls~N~l~~~--~p-~~~~~l~~L~~L~l~~n~l~~~~p-~~l~~l~~L~~ 322 (1078)
|+|++|++.+. .|..+ +++++|++|+|++|++++. ++ ..+..+++|+.|++++|.+++.+| ..+..+++|++
T Consensus 178 L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~ 257 (312)
T 1wwl_A 178 LDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNS 257 (312)
T ss_dssp EECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCE
T ss_pred EECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCE
Confidence 55555544432 12222 4555555555555555421 11 223445555555555555555443 34555667777
Q ss_pred eeccccccCccCCCCCCCCCcCcEEEccCccCCCCCCccccccCCCCeEEcccccCcc
Q 039595 323 LGLYLNQLNGVIPPSIGNLSSLRNLSLFNNGLYGSIPEEIGYLKSLSELKLCKNNLSG 380 (1078)
Q Consensus 323 L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 380 (1078)
|+|++|+++ .+|..+. ++|+.|++++|++++. |. +..+++|++|+|++|++++
T Consensus 258 L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 258 LNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp EECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred EECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 777777776 4555555 6777777777777754 44 6677777777777777764
No 308
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=1.1e-28 Score=298.27 Aligned_cols=265 Identities=28% Similarity=0.391 Sum_probs=162.1
Q ss_pred CCcEEeccCCcccccCCCCCCCCCCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeecc
Q 039595 103 HLVNLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFC 182 (1078)
Q Consensus 103 ~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~ 182 (1078)
.++.|++++|+++ .+|..+. ++|++|+|++|+++ .+|. .+++|++|+|++|+++ .+|. .+++|++|+++
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls 109 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIF 109 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEEC
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECc
Confidence 4677888888887 6777665 78888888888888 4665 5788888888888887 5666 56777888888
Q ss_pred cccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCCC
Q 039595 183 HNNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSI 262 (1078)
Q Consensus 183 ~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 262 (1078)
+|.+++ +|. .+++|+.|+|++|++++ +|.. +++|++|+|++|++++. |. .+++|+.|++++|++++ +
T Consensus 110 ~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~l-~~---~~~~L~~L~L~~N~l~~-l 176 (622)
T 3g06_A 110 SNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLASL-PA---LPSELCKLWAYNNQLTS-L 176 (622)
T ss_dssp SCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSC-C
T ss_pred CCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCCc-CC---ccCCCCEEECCCCCCCC-C
Confidence 887774 444 56777888888888774 4443 37777888888877753 43 23567777777777774 4
Q ss_pred CcccCCCcccceeecccccccCccccccccccCCceeeecccCCCCCCCccccCCCccCeeeccccccCccCCCCCCCCC
Q 039595 263 PSIIGNLKSLHQLDLIENQLSGSIPLSFGNLSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLNGVIPPSIGNLS 342 (1078)
Q Consensus 263 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 342 (1078)
| ..+++|+.|+|++|++++ +|.. +++|+.|++++|.++. +|.. +++|++|+|++|++++
T Consensus 177 ~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~-l~~~---~~~L~~L~Ls~N~L~~---------- 235 (622)
T 3g06_A 177 P---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS---------- 235 (622)
T ss_dssp C---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC----------
T ss_pred c---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcccc-cCCC---CCCCCEEEccCCccCc----------
Confidence 4 345677777777777764 2321 2445555555555542 2221 2344444444444443
Q ss_pred cCcEEEccCccCCCCCCccccccCCCCeEEcccccCccccCCCCccCCCCceeecccCcCCCCCCccccccCCCCeEEcc
Q 039595 343 SLRNLSLFNNGLYGSIPEEIGYLKSLSELKLCKNNLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLKSLTSLKRVRFN 422 (1078)
Q Consensus 343 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~ 422 (1078)
+| ..+++|+.|+|++|+|++ +|. .+++|+.|++++|+|+ .+|..+.++++|+.|+++
T Consensus 236 ---------------lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~ 292 (622)
T 3g06_A 236 ---------------LP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLE 292 (622)
T ss_dssp ---------------CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECC
T ss_pred ---------------CC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEec
Confidence 23 223445555555555442 222 3344555555555554 334455555555555555
Q ss_pred Cccccccchhhcc
Q 039595 423 QNNLVGKVYEAFG 435 (1078)
Q Consensus 423 ~N~l~~~~~~~~~ 435 (1078)
+|.+.+..+..+.
T Consensus 293 ~N~l~~~~~~~l~ 305 (622)
T 3g06_A 293 GNPLSERTLQALR 305 (622)
T ss_dssp SCCCCHHHHHHHH
T ss_pred CCCCCCcCHHHHH
Confidence 5555555444443
No 309
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=7.3e-30 Score=285.54 Aligned_cols=250 Identities=22% Similarity=0.236 Sum_probs=198.8
Q ss_pred CCCCCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeecccccccCCccCccc-------
Q 039595 123 GNLSKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLG------- 195 (1078)
Q Consensus 123 ~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~------- 195 (1078)
+..++|++|++++|.+ .+|..+... |++|+|++|+++ .+.+|..+.
T Consensus 40 ~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~-----------------------~~~~~~~~~~~~~~~~ 92 (312)
T 1wwl_A 40 GGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVR-----------------------AARIPSRILFGALRVL 92 (312)
T ss_dssp EEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEE-----------------------EEECBHHHHHHHHHHH
T ss_pred ccCCCceeEeeccccc--ccHHHHHHH--Hhhccccccccc-----------------------CCCcCHHHHHHHHHhc
Confidence 3445555555555555 445444433 555555555542 233444444
Q ss_pred CCCCCcEEEccCCCCCCCCCCcc--cccCCCCeeecCCcccCCCCCCcccCC-----CCCcEEeccccccCCCCCcccCC
Q 039595 196 NLSKLALLYLNNNSLFGYIPTVM--GNLKSLSTLDLSQNQLNGLIPCTLDNL-----SNLDTLFLYKNSLSGSIPSIIGN 268 (1078)
Q Consensus 196 ~l~~L~~L~L~~n~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~p~~l~~l-----~~L~~L~L~~N~l~~~~p~~~~~ 268 (1078)
++++|++|+|++|++++.+|..+ +.+++|++|+|++|++++. |..++.+ ++|++|+|++|++++..|..|++
T Consensus 93 ~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~ 171 (312)
T 1wwl_A 93 GISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRV 171 (312)
T ss_dssp TTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCC
T ss_pred CcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhcc
Confidence 67788888888888887777765 7888888888888888876 7777777 99999999999999988899999
Q ss_pred CcccceeecccccccCc--ccccc--ccccCCceeeecccCCCC--CC-CccccCCCccCeeeccccccCccCC-CCCCC
Q 039595 269 LKSLHQLDLIENQLSGS--IPLSF--GNLSSWTLMSLFSNSLSG--SI-PPILGNLKSLSTLGLYLNQLNGVIP-PSIGN 340 (1078)
Q Consensus 269 l~~L~~L~Ls~N~l~~~--~p~~~--~~l~~L~~L~l~~n~l~~--~~-p~~l~~l~~L~~L~L~~N~l~~~~p-~~l~~ 340 (1078)
+++|++|+|++|++.+. .|..+ +.+++|+.|++++|++++ .+ ...+.++++|++|+|++|++++.+| ..+..
T Consensus 172 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 251 (312)
T 1wwl_A 172 FPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDW 251 (312)
T ss_dssp CSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCC
T ss_pred CCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhh
Confidence 99999999999998876 34444 899999999999999984 22 2445788999999999999998775 56777
Q ss_pred CCcCcEEEccCccCCCCCCccccccCCCCeEEcccccCccccCCCCccCCCCceeecccCcCCCC
Q 039595 341 LSSLRNLSLFNNGLYGSIPEEIGYLKSLSELKLCKNNLSGVIPHSVGNLTGLVLLNMCENHLFGP 405 (1078)
Q Consensus 341 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 405 (1078)
+++|+.|+|++|+++ .+|..+. ++|++|+|++|++++. |. +..+++|++|++++|++++.
T Consensus 252 l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 252 PSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp CTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTCC
T ss_pred cCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCCC
Confidence 899999999999999 7888777 8999999999999977 65 99999999999999999763
No 310
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=3.4e-28 Score=268.46 Aligned_cols=207 Identities=22% Similarity=0.232 Sum_probs=137.8
Q ss_pred CCCCcEEeccCCcccccCCCCCCCCCCcceeccCCCccCCCCCccccCccceeEEEccCcc-CCCCCCccccccccccee
Q 039595 101 FPHLVNLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQ-LHGTIPPVIGQLSLIHEF 179 (1078)
Q Consensus 101 l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~-l~~~~p~~i~~l~~L~~L 179 (1078)
.+.|++|+|++|.+.+..+..|+++++|++|+|++|.+++..|..|+++++|++|+|++|. +++..|..++.+++|++|
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 4577777777777776666667777777777777777776667777777777777777776 554446666666666666
Q ss_pred ecccccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccC
Q 039595 180 SFCHNNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLS 259 (1078)
Q Consensus 180 ~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 259 (1078)
++++|.+++..|..++++++|++|+|++|++++..+..|+++++|++|+|++|++++..+..|..+++|++|+|++|+++
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 190 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVA 190 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCccc
Confidence 66666666666666666666666666666666555555666666666666666666555555666666666666666666
Q ss_pred CCCCcccCCCcccceeecccccccCccccccccccCCceeeecccCCC
Q 039595 260 GSIPSIIGNLKSLHQLDLIENQLSGSIPLSFGNLSSWTLMSLFSNSLS 307 (1078)
Q Consensus 260 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~ 307 (1078)
+..|..|.++++|+.|+|++|++++..+..|..+++|+.|++++|.+.
T Consensus 191 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 238 (285)
T 1ozn_A 191 HVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWV 238 (285)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEE
T ss_pred ccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCcc
Confidence 655666666666666666666666555555555555555555555554
No 311
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=2.7e-28 Score=269.31 Aligned_cols=225 Identities=24% Similarity=0.263 Sum_probs=130.3
Q ss_pred ceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeecccccccCCccCcccCCCCCcEEEccCC
Q 039595 129 QNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLYLNNN 208 (1078)
Q Consensus 129 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n 208 (1078)
++++.++++++ .+|..+ .++|++|+|++|.+++..|..++.+++|++|++++|.+++..|..|+++++|++|+|++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 56677777776 455443 356777777777766544455566666666666666665555555555666666666665
Q ss_pred C-CCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCCCCcccCCCcccceeecccccccCccc
Q 039595 209 S-LFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLDLIENQLSGSIP 287 (1078)
Q Consensus 209 ~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 287 (1078)
. +.+..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|+++++|++|+|++|++++.
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-- 168 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSV-- 168 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEE--
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCccccc--
Confidence 4 4444455555555555555555555555555555555555555555555544444455555555555555555433
Q ss_pred cccccccCCceeeecccCCCCCCCccccCCCccCeeeccccccCccCCCCCCCCCcCcEEEccCccCCCCCCccccccCC
Q 039595 288 LSFGNLSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLNGVIPPSIGNLSSLRNLSLFNNGLYGSIPEEIGYLKS 367 (1078)
Q Consensus 288 ~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 367 (1078)
.+..+.++++|++|++++|++++..|..|..+++|+.|++++|.+++..+..+..+++
T Consensus 169 ----------------------~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 226 (285)
T 1ozn_A 169 ----------------------PERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRA 226 (285)
T ss_dssp ----------------------CTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTT
T ss_pred ----------------------CHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcc
Confidence 3334555555566666666665555566666666666666666666544455666666
Q ss_pred CCeEEcccccCcc
Q 039595 368 LSELKLCKNNLSG 380 (1078)
Q Consensus 368 L~~L~L~~N~l~~ 380 (1078)
|++|++++|.+..
T Consensus 227 L~~L~l~~N~~~c 239 (285)
T 1ozn_A 227 LQYLRLNDNPWVC 239 (285)
T ss_dssp CCEEECCSSCEEC
T ss_pred cCEEeccCCCccC
Confidence 6666666666553
No 312
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=1.1e-27 Score=282.66 Aligned_cols=225 Identities=21% Similarity=0.183 Sum_probs=98.3
Q ss_pred ceeEEEccCccCCCCCCcccccccccceeecccccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeeecC
Q 039595 151 QLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLS 230 (1078)
Q Consensus 151 ~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 230 (1078)
+|++|+|++|++++..|..|+.+++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|.++++|++|+|+
T Consensus 76 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 155 (452)
T 3zyi_A 76 NTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLR 155 (452)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECC
T ss_pred CccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECC
Confidence 44444444444443334444444444444444444444444444555555555555555554444445555555555555
Q ss_pred CcccCCCCCCcccCCCCCcEEecccc-ccCCCCCcccCCCcccceeecccccccCccccccccccCCceeeecccCCCCC
Q 039595 231 QNQLNGLIPCTLDNLSNLDTLFLYKN-SLSGSIPSIIGNLKSLHQLDLIENQLSGSIPLSFGNLSSWTLMSLFSNSLSGS 309 (1078)
Q Consensus 231 ~N~l~~~~p~~l~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~ 309 (1078)
+|++++..+..|.++++|++|+|++| .+....+..|.++++|++|+|++|++++. | .+..+++|+.|++++|.+++.
T Consensus 156 ~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~ 233 (452)
T 3zyi_A 156 NNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPEI 233 (452)
T ss_dssp SCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSEE
T ss_pred CCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCccc
Confidence 55555444444555555555555542 22222223344555555555555554432 1 233333333333333333333
Q ss_pred CCccccCCCccCeeeccccccCccCCCCCCCCCcCcEEEccCccCCCCCCccccccCCCCeEEccccc
Q 039595 310 IPPILGNLKSLSTLGLYLNQLNGVIPPSIGNLSSLRNLSLFNNGLYGSIPEEIGYLKSLSELKLCKNN 377 (1078)
Q Consensus 310 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 377 (1078)
.|..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|.
T Consensus 234 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np 301 (452)
T 3zyi_A 234 RPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNP 301 (452)
T ss_dssp CGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSC
T ss_pred CcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCC
Confidence 33334444444444444444444434444444444444444444443333333334444444444443
No 313
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=2.3e-29 Score=302.48 Aligned_cols=188 Identities=19% Similarity=0.152 Sum_probs=134.5
Q ss_pred eccCCceeEEEE-EeCCCCEEEEEEeccccccC------ChhhHHHHHHHHHHHhcC-CCCceeeEEeeeecCCeeEEEE
Q 039595 759 IGKGGQGSVYKA-ELPSGDIVAVKKFNSQLLSG------NMADQDEFLNVVLALNEI-RHRNIVKFHGFCSNARHSFLVC 830 (1078)
Q Consensus 759 lG~G~~g~V~~~-~~~~~~~vavK~~~~~~~~~------~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 830 (1078)
.+.|++|.+..+ +...|+.||||++.+..... .....++|.+|+++|+++ .|+||+++++++++++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 567777777666 34468999999997653221 123345799999999999 7999999999999999999999
Q ss_pred eecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccccccCC
Q 039595 831 EYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVEPY 910 (1078)
Q Consensus 831 E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~~~ 910 (1078)
||++||+|.+++.+. ++++.. +|+.||+.||+|+|++ |||||||||+|||++.+|.+||+|||+|+.....
T Consensus 322 Eyv~G~~L~d~i~~~---~~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~ 392 (569)
T 4azs_A 322 EKLPGRLLSDMLAAG---EEIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD 392 (569)
T ss_dssp ECCCSEEHHHHHHTT---CCCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC--
T ss_pred ecCCCCcHHHHHHhC---CCCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCCC
Confidence 999999999999543 445554 4889999999999999 9999999999999999999999999999987665
Q ss_pred CCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCC
Q 039595 911 SSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 956 (1078)
Q Consensus 911 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p 956 (1078)
.......+||+.|||||++.+ .+..++|+||+|+++|++.++..+
T Consensus 393 ~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 393 CSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp -CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 555667889999999999876 467789999999999888776544
No 314
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=1.8e-27 Score=279.87 Aligned_cols=224 Identities=26% Similarity=0.280 Sum_probs=99.2
Q ss_pred ceeecccccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEecccc
Q 039595 177 HEFSFCHNNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKN 256 (1078)
Q Consensus 177 ~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 256 (1078)
+.|+|++|++.+..+..|+++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 67 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 146 (440)
T 3zyj_A 67 RLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNN 146 (440)
T ss_dssp SEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSC
T ss_pred cEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCC
Confidence 33333333333333344444444444444444444333344444444444444444444433334444444444444444
Q ss_pred ccCCCCCcccCCCcccceeeccccc-ccCccccccccccCCceeeecccCCCCCCCccccCCCccCeeeccccccCccCC
Q 039595 257 SLSGSIPSIIGNLKSLHQLDLIENQ-LSGSIPLSFGNLSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLNGVIP 335 (1078)
Q Consensus 257 ~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p 335 (1078)
+++...+..|.++++|++|+|++|. +....+..|.++++|+.|++++|+++ .+| .+..+++|++|+|++|++++..|
T Consensus 147 ~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~ 224 (440)
T 3zyj_A 147 PIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRP 224 (440)
T ss_dssp CCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECT
T ss_pred cccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccCh
Confidence 4443333344444444444444422 22122223333333333333333333 122 23444555555555555554445
Q ss_pred CCCCCCCcCcEEEccCccCCCCCCccccccCCCCeEEcccccCccccCCCCccCCCCceeecccCcC
Q 039595 336 PSIGNLSSLRNLSLFNNGLYGSIPEEIGYLKSLSELKLCKNNLSGVIPHSVGNLTGLVLLNMCENHL 402 (1078)
Q Consensus 336 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 402 (1078)
..|..+++|+.|+|++|++.+..+..|..+++|++|+|++|++++..+..|..+++|+.|++++|++
T Consensus 225 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~ 291 (440)
T 3zyj_A 225 GSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPW 291 (440)
T ss_dssp TTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCE
T ss_pred hhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCc
Confidence 5555555555555555555544444455555555555555555544444444444555555544443
No 315
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=1.5e-27 Score=281.56 Aligned_cols=248 Identities=23% Similarity=0.262 Sum_probs=156.9
Q ss_pred eeEEEccCccCCCCCCcccccccccceeecccccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeeecCC
Q 039595 152 LRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQ 231 (1078)
Q Consensus 152 L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 231 (1078)
.+.++.+++.++ .+|..+. +++++|+|++|++++..|..|+++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 56 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 132 (452)
T 3zyi_A 56 FSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFD 132 (452)
T ss_dssp SCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCC
Confidence 456677777776 5665543 4667777777777766666677777777777777777666666666677777777777
Q ss_pred cccCCCCCCcccCCCCCcEEeccccccCCCCCcccCCCcccceeecccccccCccccccccccCCceeeecccCCCCCCC
Q 039595 232 NQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLDLIENQLSGSIPLSFGNLSSWTLMSLFSNSLSGSIP 311 (1078)
Q Consensus 232 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p 311 (1078)
|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|...+.++ +
T Consensus 133 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~-----------------------~ 189 (452)
T 3zyi_A 133 NWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYIS-----------------------E 189 (452)
T ss_dssp SCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEEC-----------------------T
T ss_pred CcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccC-----------------------h
Confidence 77666555556666666666666666665555566666666666666632222222 2
Q ss_pred ccccCCCccCeeeccccccCccCCCCCCCCCcCcEEEccCccCCCCCCccccccCCCCeEEcccccCccccCCCCccCCC
Q 039595 312 PILGNLKSLSTLGLYLNQLNGVIPPSIGNLSSLRNLSLFNNGLYGSIPEEIGYLKSLSELKLCKNNLSGVIPHSVGNLTG 391 (1078)
Q Consensus 312 ~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 391 (1078)
..|.++++|++|+|++|++++. | .+..+++|+.|+|++|.+.+..|..|..+++|+.|+|++|++++..|..|.++++
T Consensus 190 ~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 267 (452)
T 3zyi_A 190 GAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLAS 267 (452)
T ss_dssp TTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred hhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCC
Confidence 2345555555555555555533 2 3555666666666666666655666666666666666666666666666666666
Q ss_pred CceeecccCcCCCCCCccccccCCCCeEEccCcccc
Q 039595 392 LVLLNMCENHLFGPIPKSLKSLTSLKRVRFNQNNLV 427 (1078)
Q Consensus 392 L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 427 (1078)
|+.|+|++|++++..+..|..+++|++|++++|.+.
T Consensus 268 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 268 LVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp CCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred CCEEECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 666666666666666666666666667777666653
No 316
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=3.1e-27 Score=277.79 Aligned_cols=249 Identities=25% Similarity=0.305 Sum_probs=150.6
Q ss_pred cceeecccccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccc
Q 039595 176 IHEFSFCHNNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYK 255 (1078)
Q Consensus 176 L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~ 255 (1078)
...++..++++. .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++
T Consensus 45 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 121 (440)
T 3zyj_A 45 FSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 121 (440)
T ss_dssp SCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCS
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCC
Confidence 344555555554 4555444 4555555555555555555555555555555555555555555555555555555555
Q ss_pred cccCCCCCcccCCCcccceeecccccccCccccccccccCCceeeecccCCCCCCCccccCCCccCeeeccc-cccCccC
Q 039595 256 NSLSGSIPSIIGNLKSLHQLDLIENQLSGSIPLSFGNLSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYL-NQLNGVI 334 (1078)
Q Consensus 256 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~ 334 (1078)
|++++..+..|.++++|++|+|++|++++..+ ..|.++++|++|+|++ |.+....
T Consensus 122 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~------------------------~~~~~l~~L~~L~l~~~~~l~~i~ 177 (440)
T 3zyj_A 122 NRLTTIPNGAFVYLSKLKELWLRNNPIESIPS------------------------YAFNRIPSLRRLDLGELKRLSYIS 177 (440)
T ss_dssp SCCSSCCTTTSCSCSSCCEEECCSCCCCEECT------------------------TTTTTCTTCCEEECCCCTTCCEEC
T ss_pred CcCCeeCHhHhhccccCceeeCCCCcccccCH------------------------HHhhhCcccCEeCCCCCCCcceeC
Confidence 55554444455555555555555555554433 4455555555555555 2333333
Q ss_pred CCCCCCCCcCcEEEccCccCCCCCCccccccCCCCeEEcccccCccccCCCCccCCCCceeecccCcCCCCCCccccccC
Q 039595 335 PPSIGNLSSLRNLSLFNNGLYGSIPEEIGYLKSLSELKLCKNNLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLKSLT 414 (1078)
Q Consensus 335 p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~ 414 (1078)
+..|.++++|+.|+|++|+++ .+| .+..+++|++|+|++|++++..|..|.++++|+.|++++|++.+..+..|..++
T Consensus 178 ~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 255 (440)
T 3zyj_A 178 EGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQ 255 (440)
T ss_dssp TTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCT
T ss_pred cchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCC
Confidence 445666666666666666665 333 356666666677777766666666666667777777777776666666666777
Q ss_pred CCCeEEccCccccccchhhccCCCCCcEecCCCCccCCc
Q 039595 415 SLKRVRFNQNNLVGKVYEAFGDHPNLTFLDLSQNNFDGK 453 (1078)
Q Consensus 415 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 453 (1078)
+|++|++++|+++.+....|..+++|+.|+|++|++.+.
T Consensus 256 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~Cd 294 (440)
T 3zyj_A 256 SLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCN 294 (440)
T ss_dssp TCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECS
T ss_pred CCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCC
Confidence 777777777777777777777778888888888887653
No 317
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=4.4e-29 Score=279.83 Aligned_cols=257 Identities=17% Similarity=0.138 Sum_probs=130.9
Q ss_pred CcEEeccCCcccccCCCCCCCCCCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeeccc
Q 039595 104 LVNLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCH 183 (1078)
Q Consensus 104 L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~ 183 (1078)
++.++++++.+...++..+..+++|++|+|++|++++..|..|+++++|++|+|++|++++..| ++.+++|++|++++
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~ 89 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNN 89 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCS
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcC
Confidence 3445555555544444444555666666666666666555666666666666666666664333 55566666666666
Q ss_pred ccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCCCC
Q 039595 184 NNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIP 263 (1078)
Q Consensus 184 n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p 263 (1078)
|.+++.. ..++|++|++++|++++..+.. +++|++|+|++|++++..|..+..+++|++|+|++|++++..|
T Consensus 90 n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 161 (317)
T 3o53_A 90 NYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNF 161 (317)
T ss_dssp SEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEG
T ss_pred Ccccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccH
Confidence 6555321 2355666666666655443322 3455555666655555555555555555555555555554444
Q ss_pred ccc-CCCcccceeecccccccCccccccccccCCceeeecccCCCCCCCccccCCCccCeeeccccccCccCCCCCCCCC
Q 039595 264 SII-GNLKSLHQLDLIENQLSGSIPLSFGNLSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLNGVIPPSIGNLS 342 (1078)
Q Consensus 264 ~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 342 (1078)
..+ ..+++|++|+|++|++++..+ ...+++|+.|++++|++++. |..+..+++|++|+|++|++++ +|..+..++
T Consensus 162 ~~~~~~l~~L~~L~L~~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~l~ 237 (317)
T 3o53_A 162 AELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFSQ 237 (317)
T ss_dssp GGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCCT
T ss_pred HHHhhccCcCCEEECCCCcCccccc--ccccccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCcccc-hhhHhhcCC
Confidence 443 245555555555555553311 11244444444444444422 2224444444444444444442 233344444
Q ss_pred cCcEEEccCccCC-CCCCccccccCCCCeEEcc
Q 039595 343 SLRNLSLFNNGLY-GSIPEEIGYLKSLSELKLC 374 (1078)
Q Consensus 343 ~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~ 374 (1078)
+|+.|++++|.+. +.+|..+..+++|+.|+++
T Consensus 238 ~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~ 270 (317)
T 3o53_A 238 NLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (317)
T ss_dssp TCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHH
T ss_pred CCCEEEccCCCccCcCHHHHHhccccceEEECC
Confidence 4444444444444 3334444444444444444
No 318
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=6.5e-29 Score=278.48 Aligned_cols=258 Identities=17% Similarity=0.159 Sum_probs=158.6
Q ss_pred CcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeecccccccCCccCcccCCCCCcEEEcc
Q 039595 127 KLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLYLN 206 (1078)
Q Consensus 127 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~ 206 (1078)
+++.++++++.+...++..+..+++|++|+|++|.+++..|..++.+++|++|++++|.+++..| ++.+++|++|+|+
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 45566777777764444455667788888888888887666778888888888888888776554 7777778888888
Q ss_pred CCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCCCCcccCCCcccceeecccccccCcc
Q 039595 207 NNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLDLIENQLSGSI 286 (1078)
Q Consensus 207 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 286 (1078)
+|++++.. ..++|++|++++|++++..+.. +++|++|++++|++++..|..++.+++|++|+|++|++++..
T Consensus 89 ~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 160 (317)
T 3o53_A 89 NNYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN 160 (317)
T ss_dssp SSEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEE
T ss_pred CCcccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCccc
Confidence 87776432 3367777777777777654433 456777777777777666666777777777777777777655
Q ss_pred ccccc-cccCCceeeecccCCCCCCCccccCCCccCeeeccccccCccCCCCCCCCCcCcEEEccCccCCCCCCcccccc
Q 039595 287 PLSFG-NLSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLNGVIPPSIGNLSSLRNLSLFNNGLYGSIPEEIGYL 365 (1078)
Q Consensus 287 p~~~~-~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l 365 (1078)
|..+. .+++|+.|++++|.+++. + ....+++|++|+|++|++++. |..+..+++|+.|++++|+++ .+|..+..+
T Consensus 161 ~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l 236 (317)
T 3o53_A 161 FAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLV-LIEKALRFS 236 (317)
T ss_dssp GGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCC-EECTTCCCC
T ss_pred HHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCccc-chhhHhhcC
Confidence 55542 455555555555555533 1 112345555555555555533 222444555555555555554 344444445
Q ss_pred CCCCeEEcccccCc-cccCCCCccCCCCceeecc
Q 039595 366 KSLSELKLCKNNLS-GVIPHSVGNLTGLVLLNMC 398 (1078)
Q Consensus 366 ~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~ 398 (1078)
++|+.|++++|.+. +.+|..+..+++|+.|+++
T Consensus 237 ~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~ 270 (317)
T 3o53_A 237 QNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (317)
T ss_dssp TTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHH
T ss_pred CCCCEEEccCCCccCcCHHHHHhccccceEEECC
Confidence 55555555555554 3344444444444444444
No 319
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=4.1e-26 Score=249.47 Aligned_cols=216 Identities=27% Similarity=0.354 Sum_probs=121.4
Q ss_pred CCCCcccceEeeCCCCeEEEeccCccccCCcccCCccCCCCCCcEEeccCCcccccCCCCCCCCCCcceeccCCCccCCC
Q 039595 62 ISPCSWFGISCNHAGSRVISINLSTLCLNGTFQDFSFSSFPHLVNLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLSGV 141 (1078)
Q Consensus 62 ~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~ 141 (1078)
.++|.|.|+.|.-.. ..+.++++++.++ .+|..+. +.|++|+|++|++++.
T Consensus 2 ~~~C~~~~~~C~c~~--------------------------~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~ 52 (270)
T 2o6q_A 2 EALCKKDGGVCSCNN--------------------------NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSL 52 (270)
T ss_dssp CCCBGGGTCSBEEET--------------------------TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCC
T ss_pred CccCCCCCCCCEeCC--------------------------CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCee
Confidence 479999999996321 2234555556655 3454443 4566667766666655
Q ss_pred CCccccCccceeEEEccCccCCCCCCcccccccccceeecccccccCCccCcccCCCCCcEEEccCCCCCCCCCCccccc
Q 039595 142 ISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNL 221 (1078)
Q Consensus 142 ~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l 221 (1078)
.+..|+++++|++|+|++|++++..+..++.+++|++|++++|.+.+..+..+.++++|++|+|++|++++..|..|+++
T Consensus 53 ~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 132 (270)
T 2o6q_A 53 PSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSL 132 (270)
T ss_dssp CTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTC
T ss_pred CHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcC
Confidence 55566666666666666666663322333555555555555555554444455555556666666665555555555555
Q ss_pred CCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCCCCcccCCCcccceeecccccccCccccccccccCCceeee
Q 039595 222 KSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLDLIENQLSGSIPLSFGNLSSWTLMSL 301 (1078)
Q Consensus 222 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 301 (1078)
++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|+.|++
T Consensus 133 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 212 (270)
T 2o6q_A 133 TKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQL 212 (270)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEe
Confidence 55556666555555544444555555555555555555544445555555555555555555444334444444444444
Q ss_pred cccCC
Q 039595 302 FSNSL 306 (1078)
Q Consensus 302 ~~n~l 306 (1078)
++|.+
T Consensus 213 ~~N~~ 217 (270)
T 2o6q_A 213 QENPW 217 (270)
T ss_dssp CSSCB
T ss_pred cCCCe
Confidence 44443
No 320
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=3e-25 Score=268.34 Aligned_cols=269 Identities=24% Similarity=0.296 Sum_probs=188.3
Q ss_pred CCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeecccccccCCccCcccCCCCCcEEEc
Q 039595 126 SKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLYL 205 (1078)
Q Consensus 126 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L 205 (1078)
.++++|++++|+++ .+|..+. ++|++|+|++|.++ .+|. .+++|++|+|++|.++ .+|. .+++|++|+|
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~L 108 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSI 108 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEE
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEEC
Confidence 35889999999998 7788776 78999999999888 5665 4566666666666665 3444 4566666666
Q ss_pred cCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCCCCcccCCCcccceeecccccccCc
Q 039595 206 NNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLDLIENQLSGS 285 (1078)
Q Consensus 206 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 285 (1078)
++|++++ +|. .+++|+.|+|++|++++ +|.. +++|++|+|++|++++ +|.. +++|+.|++++|++
T Consensus 109 s~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l--- 173 (622)
T 3g06_A 109 FSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQL--- 173 (622)
T ss_dssp CSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCC---
T ss_pred cCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCCc---cCCCCEEECCCCCC---
Confidence 6666654 232 34556666666666654 2322 2555555555555553 2321 23444555555544
Q ss_pred cccccccccCCceeeecccCCCCCCCccccCCCccCeeeccccccCccCCCCCCCCCcCcEEEccCccCCCCCCcccccc
Q 039595 286 IPLSFGNLSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLNGVIPPSIGNLSSLRNLSLFNNGLYGSIPEEIGYL 365 (1078)
Q Consensus 286 ~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l 365 (1078)
++ +| ..+++|+.|++++|++++ +|.. +++|+.|++++|.++ .+|.. +
T Consensus 174 ---------------------~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~-~l~~~---~ 220 (622)
T 3g06_A 174 ---------------------TS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT-SLPAL---P 220 (622)
T ss_dssp ---------------------SC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-SCCCC---C
T ss_pred ---------------------CC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCccc-ccCCC---C
Confidence 43 33 345678888888888875 3432 368889999999998 45543 4
Q ss_pred CCCCeEEcccccCccccCCCCccCCCCceeecccCcCCCCCCccccccCCCCeEEccCccccccchhhccCCCCCcEecC
Q 039595 366 KSLSELKLCKNNLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLKSLTSLKRVRFNQNNLVGKVYEAFGDHPNLTFLDL 445 (1078)
Q Consensus 366 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 445 (1078)
++|+.|+|++|+|++ +| ..+++|+.|++++|+|+. +|. .+++|+.|++++|.|..+ +..|..+++|+.|+|
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~~l-p~~l~~l~~L~~L~L 291 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLTRL-PESLIHLSSETTVNL 291 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCCSC-CGGGGGSCTTCEEEC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCCcC-CHHHhhccccCEEEe
Confidence 789999999999996 44 456899999999999985 444 678999999999999976 456899999999999
Q ss_pred CCCccCCccCccccCCC
Q 039595 446 SQNNFDGKISFNWRNLP 462 (1078)
Q Consensus 446 s~N~l~~~~~~~~~~l~ 462 (1078)
++|++++..+..+..++
T Consensus 292 ~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 292 EGNPLSERTLQALREIT 308 (622)
T ss_dssp CSCCCCHHHHHHHHHHH
T ss_pred cCCCCCCcCHHHHHhcc
Confidence 99999987766555443
No 321
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=1.2e-27 Score=283.79 Aligned_cols=235 Identities=20% Similarity=0.190 Sum_probs=117.6
Q ss_pred CCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeecccccccCCccCcccCCCCCcEEEc
Q 039595 126 SKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLYL 205 (1078)
Q Consensus 126 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L 205 (1078)
++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..| ++.+++|++|+|++|.+++.. ..++|++|+|
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~L~L 106 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLHA 106 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTCCEEEC
T ss_pred CCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCcCEEEC
Confidence 355555555555555555555555555555555555554333 444445555555555444221 1245555555
Q ss_pred cCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCCCCcccC-CCcccceeecccccccC
Q 039595 206 NNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSIIG-NLKSLHQLDLIENQLSG 284 (1078)
Q Consensus 206 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~ 284 (1078)
++|.+++..+. .+++|+.|+|++|++++..|..|+++++|++|+|++|.+++.+|..+. ++++|+.|+|++|.+++
T Consensus 107 ~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~ 183 (487)
T 3oja_A 107 ANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD 183 (487)
T ss_dssp CSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE
T ss_pred cCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccc
Confidence 55555443332 234455555555555544444444445555555555555444444443 34445555555544443
Q ss_pred ccccccccccCCceeeecccCCCCCCCccccCCCccCeeeccccccCccCCCCCCCCCcCcEEEccCccCCCCCCccccc
Q 039595 285 SIPLSFGNLSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLNGVIPPSIGNLSSLRNLSLFNNGLYGSIPEEIGY 364 (1078)
Q Consensus 285 ~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~ 364 (1078)
..+ +..+++|++|+|++|++++.+| .+..+++|+.|+|++|.+++ +|..+..
T Consensus 184 ~~~--------------------------~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~ 235 (487)
T 3oja_A 184 VKG--------------------------QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRF 235 (487)
T ss_dssp EEC--------------------------CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCC
T ss_pred ccc--------------------------cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhcc
Confidence 311 2234555555555555554322 25555555555555555553 4445555
Q ss_pred cCCCCeEEcccccCc-cccCCCCccCCCCceeecc
Q 039595 365 LKSLSELKLCKNNLS-GVIPHSVGNLTGLVLLNMC 398 (1078)
Q Consensus 365 l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~ 398 (1078)
+++|+.|++++|.+. +.+|..+..++.|+.++++
T Consensus 236 l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 236 SQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp CTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 555566666665555 4444555555555555554
No 322
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.93 E-value=4.4e-30 Score=314.94 Aligned_cols=453 Identities=13% Similarity=0.127 Sum_probs=225.7
Q ss_pred CCcccceEeeCCCCeEEEeccCccccCCcccCCccCCCCCCcEEeccCCcccc---cCCCC------------CCCCCCc
Q 039595 64 PCSWFGISCNHAGSRVISINLSTLCLNGTFQDFSFSSFPHLVNLNLSFNLFFG---NIPPQ------------IGNLSKL 128 (1078)
Q Consensus 64 ~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~L~~n~~~~---~~p~~------------~~~l~~L 128 (1078)
|++|.++... .+..+++... .+..+...+.++++|+.|+|+++.... ..|.. ...+++|
T Consensus 34 ck~W~~~~~~----~~~~l~~~~~--~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L 107 (594)
T 2p1m_B 34 CKSWYEIERW----CRRKVFIGNC--YAVSPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWL 107 (594)
T ss_dssp CHHHHHHHHH----HCCEEEESST--TSSCHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTC
T ss_pred HHHHHHhhhh----hceEEeeccc--cccCHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCC
Confidence 5579998322 2223334321 122233345678889999999875432 12221 2345667
Q ss_pred ceeccCCCccCCCCCcccc-CccceeEEEccCc-cCCCC-CCcccccccccceeecccccccCCccCccc----CCCCCc
Q 039595 129 QNLDLGNNQLSGVISPEIG-KLNQLRRLYLDMN-QLHGT-IPPVIGQLSLIHEFSFCHNNVSGRIPSSLG----NLSKLA 201 (1078)
Q Consensus 129 ~~L~Ls~n~l~~~~p~~~~-~l~~L~~L~L~~n-~l~~~-~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~----~l~~L~ 201 (1078)
++|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+..+++|++|++++|.+++..+..+. .+++|+
T Consensus 108 ~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~ 187 (594)
T 2p1m_B 108 EEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLV 187 (594)
T ss_dssp CEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCC
T ss_pred CeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCc
Confidence 7777777666655555554 4666777777666 33321 333344566666666666665544333332 445666
Q ss_pred EEEccCCCCCCCCCCc----ccccCCCCeeecCCc-ccCCCCCCcccCCCCCcEEeccccccCCCCCcccCCCcccceee
Q 039595 202 LLYLNNNSLFGYIPTV----MGNLKSLSTLDLSQN-QLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLD 276 (1078)
Q Consensus 202 ~L~L~~n~l~~~~p~~----~~~l~~L~~L~L~~N-~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 276 (1078)
.|+|++|. ....... +.++++|++|+|++| .+++ +|..+..+++|++|+++.+...
T Consensus 188 ~L~l~~~~-~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~----------------- 248 (594)
T 2p1m_B 188 SLNISCLA-SEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAE----------------- 248 (594)
T ss_dssp EEECTTCC-SCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCC-----------------
T ss_pred EEEecccC-CcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCc-----------------
Confidence 66666665 1111111 223456666666665 3333 4455555566666654332210
Q ss_pred cccccccCccccccccccCCcee-eecccCCCCCCCccccCCCccCeeeccccccCccCC-CCCCCCCcCcEEEccCccC
Q 039595 277 LIENQLSGSIPLSFGNLSSWTLM-SLFSNSLSGSIPPILGNLKSLSTLGLYLNQLNGVIP-PSIGNLSSLRNLSLFNNGL 354 (1078)
Q Consensus 277 Ls~N~l~~~~p~~~~~l~~L~~L-~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l 354 (1078)
++.|.+.+ ++..+.++++|+.+ .+.+.. .+.++..+..+++|++|+|++|.+++... ..+..+++|+.|++++| +
T Consensus 249 ~~~~~~~~-l~~~l~~~~~L~~Ls~~~~~~-~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~ 325 (594)
T 2p1m_B 249 VRPDVYSG-LSVALSGCKELRCLSGFWDAV-PAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-I 325 (594)
T ss_dssp CCHHHHHH-HHHHHHTCTTCCEEECCBTCC-GGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-G
T ss_pred cchhhHHH-HHHHHhcCCCcccccCCcccc-hhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-c
Confidence 22222222 12233444444444 121111 11233333344455555555554432211 11234455555555554 2
Q ss_pred CCC-CCccccccCCCCeEEcc---------cccCccccCCCCc-cCCCCceeecccCcCCCCCCcccc-ccCCCCeEEcc
Q 039595 355 YGS-IPEEIGYLKSLSELKLC---------KNNLSGVIPHSVG-NLTGLVLLNMCENHLFGPIPKSLK-SLTSLKRVRFN 422 (1078)
Q Consensus 355 ~~~-~p~~~~~l~~L~~L~L~---------~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~~~~l~-~l~~L~~L~L~ 422 (1078)
.+. ++.....+++|++|+++ .+.+++.....+. ++++|+.|.+..|.+++..+..+. .+++|++|+++
T Consensus 326 ~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~ 405 (594)
T 2p1m_B 326 EDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLC 405 (594)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEE
T ss_pred CHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEee
Confidence 211 11112234555555552 2233322211121 245555555555555443333333 35556666665
Q ss_pred --C----ccccccc-----hhhccCCCCCcEecCCCCccCCccCccccC-CCCCceecccccccCCCCCccc-cCCCccc
Q 039595 423 --Q----NNLVGKV-----YEAFGDHPNLTFLDLSQNNFDGKISFNWRN-LPKLDTFIVSMNNIFGSIPLEI-GDSSKLQ 489 (1078)
Q Consensus 423 --~----N~l~~~~-----~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~l~~N~i~~~~~~~~-~~l~~L~ 489 (1078)
+ |.++... ...+..+++|+.|++++ .++......+.. +++|+.|++++|.+++.....+ ..+++|+
T Consensus 406 ~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~ 484 (594)
T 2p1m_B 406 IIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLR 484 (594)
T ss_dssp ESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCC
T ss_pred cccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcC
Confidence 2 3343211 11244556777777765 444433333333 6667777777777655444444 5578888
Q ss_pred EEeccCCccCCCccc-ccccCccCcEEeccCCccCCCccccc-ccccccceeeccCcc
Q 039595 490 FLDLSSNHIVGKIPV-QLEKLFSLNKLILSLNQLSGSVPLEF-GSLTELQYLDLSANK 545 (1078)
Q Consensus 490 ~L~Ls~N~i~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~Ls~N~ 545 (1078)
+|+|++|.+++.... ....+++|+.|++++|+++......+ ..+++|+...+..+.
T Consensus 485 ~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~ 542 (594)
T 2p1m_B 485 KLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERG 542 (594)
T ss_dssp EEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSS
T ss_pred EEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCC
Confidence 999999888644443 34457889999999998853333333 456777666666554
No 323
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=7.1e-27 Score=277.21 Aligned_cols=235 Identities=24% Similarity=0.267 Sum_probs=170.6
Q ss_pred CCCCeEEcccccCccccCCCCccCCCCceeecccCcCCCCCCccccccCCCCeEEccCccccccchhhccCCCCCcEecC
Q 039595 366 KSLSELKLCKNNLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLKSLTSLKRVRFNQNNLVGKVYEAFGDHPNLTFLDL 445 (1078)
Q Consensus 366 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 445 (1078)
++|++|+|++|.+++..|..|.++++|++|+|++|.+++..| +..+++|++|++++|.+.++... ++|++|++
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~-----~~L~~L~L 106 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVG-----PSIETLHA 106 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEEC-----TTCCEEEC
T ss_pred CCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCC-----CCcCEEEC
Confidence 367777777777776666666666666666666666655443 55555555555555555443321 44555555
Q ss_pred CCCccCCccCccccCCCCCceecccccccCCCCCccccCCCcccEEeccCCccCCCcccccccCccCcEEeccCCccCCC
Q 039595 446 SQNNFDGKISFNWRNLPKLDTFIVSMNNIFGSIPLEIGDSSKLQFLDLSSNHIVGKIPVQLEKLFSLNKLILSLNQLSGS 525 (1078)
Q Consensus 446 s~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 525 (1078)
++|.++ +..+. .+++|+.|+|++|.|++..|..+..+++|+.|+|++|++++.
T Consensus 107 ~~N~l~------------------------~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 159 (487)
T 3oja_A 107 ANNNIS------------------------RVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTV 159 (487)
T ss_dssp CSSCCC------------------------CEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEE
T ss_pred cCCcCC------------------------CCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCc
Confidence 555444 33322 346788888888888877788888888888888888888877
Q ss_pred cccccc-cccccceeeccCccccCCCCcccccccccccccccCcccccccchhhhcccccCeeecCCCccCCcCCCCccc
Q 039595 526 VPLEFG-SLTELQYLDLSANKLSSSIPKSIGNLLKLYYLNLSNNQFSHTIPIEFEKLIHLSKLDLSHNILQEEIPPQVCN 604 (1078)
Q Consensus 526 ~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 604 (1078)
.|..|. .+++|++|+|++|.|++..+ +..+++|++|+|++|+|++.+| .|..+++|+.|+|++|.|++ +|..+..
T Consensus 160 ~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~ 235 (487)
T 3oja_A 160 NFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRF 235 (487)
T ss_dssp EGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCC
T ss_pred ChHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhcc
Confidence 777775 68888888888888886532 3357889999999999986444 58889999999999999985 6777888
Q ss_pred ccccceeeccCcccc-CCcccccccCCcCcEEEcc
Q 039595 605 MESLEKLNLSHNNLS-GFIPRCFEKMRSLSCIDIC 638 (1078)
Q Consensus 605 l~~L~~L~L~~N~l~-~~~~~~l~~l~~L~~l~l~ 638 (1078)
+++|+.|++++|++. +.+|..+..++.|+.++++
T Consensus 236 l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 236 SQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp CTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 899999999999998 6678888888888888886
No 324
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.93 E-value=7.9e-29 Score=303.81 Aligned_cols=424 Identities=15% Similarity=0.121 Sum_probs=224.9
Q ss_pred cccCCCCCcEEEccCCCCC---CCCCCc------------ccccCCCCeeecCCcccCCCCCCccc-CCCCCcEEecccc
Q 039595 193 SLGNLSKLALLYLNNNSLF---GYIPTV------------MGNLKSLSTLDLSQNQLNGLIPCTLD-NLSNLDTLFLYKN 256 (1078)
Q Consensus 193 ~l~~l~~L~~L~L~~n~l~---~~~p~~------------~~~l~~L~~L~L~~N~l~~~~p~~l~-~l~~L~~L~L~~N 256 (1078)
.+..+++|+.|+|++|... +..|.. ...+++|++|+|++|.+++..+..+. .+++|++|+|++|
T Consensus 61 ~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~ 140 (594)
T 2p1m_B 61 VIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSC 140 (594)
T ss_dssp HHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCc
Confidence 3556778888888877532 122221 12455666666666666554444443 4566666666666
Q ss_pred -ccCCC-CCcccCCCcccceeecccccccCccccccccccCCceeeecccCCCCCCCccccCCCccCeeeccccc--cCc
Q 039595 257 -SLSGS-IPSIIGNLKSLHQLDLIENQLSGSIPLSFGNLSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQ--LNG 332 (1078)
Q Consensus 257 -~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~--l~~ 332 (1078)
.++.. ++..+.++++|++|+|++|.+++..+..+.. ....+++|++|++++|. ++.
T Consensus 141 ~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~--------------------~~~~~~~L~~L~l~~~~~~~~~ 200 (594)
T 2p1m_B 141 EGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSH--------------------FPDTYTSLVSLNISCLASEVSF 200 (594)
T ss_dssp EEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGG--------------------SCTTCCCCCEEECTTCCSCCCH
T ss_pred CCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHH--------------------HhhcCCcCcEEEecccCCcCCH
Confidence 33321 2333345566666666666655443333221 11234455555555544 110
Q ss_pred c-CCCCCCCCCcCcEEEccCc-cCCCCCCccccccCCCCeEEccc-------ccCccccCCCCccCCCCcee-ecccCcC
Q 039595 333 V-IPPSIGNLSSLRNLSLFNN-GLYGSIPEEIGYLKSLSELKLCK-------NNLSGVIPHSVGNLTGLVLL-NMCENHL 402 (1078)
Q Consensus 333 ~-~p~~l~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~-------N~l~~~~p~~~~~l~~L~~L-~L~~N~l 402 (1078)
. ++..+..+++|+.|++++| .+. .+|..+..+++|++|+++. |.+.+. +..+.++++|+.| .+.+...
T Consensus 201 ~~l~~l~~~~~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l-~~~l~~~~~L~~Ls~~~~~~~ 278 (594)
T 2p1m_B 201 SALERLVTRCPNLKSLKLNRAVPLE-KLATLLQRAPQLEELGTGGYTAEVRPDVYSGL-SVALSGCKELRCLSGFWDAVP 278 (594)
T ss_dssp HHHHHHHHHCTTCCEEECCTTSCHH-HHHHHHHHCTTCSEEECSBCCCCCCHHHHHHH-HHHHHTCTTCCEEECCBTCCG
T ss_pred HHHHHHHHhCCCCcEEecCCCCcHH-HHHHHHhcCCcceEcccccccCccchhhHHHH-HHHHhcCCCcccccCCcccch
Confidence 0 0011122355555555555 222 2444555555555555332 223322 2244555556555 2222211
Q ss_pred CCCCCccccccCCCCeEEccCccccccchh-hccCCCCCcEecCCCCccCCccC-ccccCCCCCceeccc---------c
Q 039595 403 FGPIPKSLKSLTSLKRVRFNQNNLVGKVYE-AFGDHPNLTFLDLSQNNFDGKIS-FNWRNLPKLDTFIVS---------M 471 (1078)
Q Consensus 403 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~l~---------~ 471 (1078)
+.++..+..+++|++|++++|.+...... .+..+++|+.|++++| +..... .....+++|++|+++ .
T Consensus 279 -~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~ 356 (594)
T 2p1m_B 279 -AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPN 356 (594)
T ss_dssp -GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCS
T ss_pred -hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccC
Confidence 22333344556666666666664433222 2345566666666665 321111 112235556666552 2
Q ss_pred cccCCCCCcccc-CCCcccEEeccCCccCCCcccccc-cCccCcEEecc--C----CccCCCc-----ccccccccccce
Q 039595 472 NNIFGSIPLEIG-DSSKLQFLDLSSNHIVGKIPVQLE-KLFSLNKLILS--L----NQLSGSV-----PLEFGSLTELQY 538 (1078)
Q Consensus 472 N~i~~~~~~~~~-~l~~L~~L~Ls~N~i~~~~~~~~~-~l~~L~~L~Ls--~----N~l~~~~-----~~~~~~l~~L~~ 538 (1078)
+.+++.....+. .+++|+.|+++.|.+++.....+. .+++|+.|+++ + |++++.. +..+..+++|+.
T Consensus 357 ~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~ 436 (594)
T 2p1m_B 357 VALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRR 436 (594)
T ss_dssp SCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCE
T ss_pred CCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccE
Confidence 333332222222 367777777777777755555554 46778888887 3 5555221 122556677888
Q ss_pred eeccCccccCCCCccccc-ccccccccccCcccccccchhh-hcccccCeeecCCCccCCcCCC-CcccccccceeeccC
Q 039595 539 LDLSANKLSSSIPKSIGN-LLKLYYLNLSNNQFSHTIPIEF-EKLIHLSKLDLSHNILQEEIPP-QVCNMESLEKLNLSH 615 (1078)
Q Consensus 539 L~Ls~N~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~L~~ 615 (1078)
|+|++ .+++..+..+.. +++|++|+|++|.+++..+..+ .++++|+.|+|++|.+++.... ....+++|++|++++
T Consensus 437 L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~ 515 (594)
T 2p1m_B 437 LSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSS 515 (594)
T ss_dssp EECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEES
T ss_pred EeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeC
Confidence 88866 555544445554 6778888888888766555555 5678888888888887543333 334577888888888
Q ss_pred ccccCCccccc-ccCCcCcEEEcccCc
Q 039595 616 NNLSGFIPRCF-EKMRSLSCIDICYNE 641 (1078)
Q Consensus 616 N~l~~~~~~~l-~~l~~L~~l~l~~N~ 641 (1078)
|+++......+ ..+|+|+...+..+.
T Consensus 516 ~~~~~~~~~~l~~~lp~l~i~~~~~~~ 542 (594)
T 2p1m_B 516 CSVSFGACKLLGQKMPKLNVEVIDERG 542 (594)
T ss_dssp SCCBHHHHHHHHHHCTTEEEEEECSSS
T ss_pred CCCCHHHHHHHHHhCCCCEEEEecCCC
Confidence 87754444444 456777665555443
No 325
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=4.3e-25 Score=242.36 Aligned_cols=211 Identities=26% Similarity=0.256 Sum_probs=169.1
Q ss_pred CCcEecCCCCccCCccCccccCCCCCceecccccccCCCCCccccCCCcccEEeccCCccCCCcccccccCccCcEEecc
Q 039595 439 NLTFLDLSQNNFDGKISFNWRNLPKLDTFIVSMNNIFGSIPLEIGDSSKLQFLDLSSNHIVGKIPVQLEKLFSLNKLILS 518 (1078)
Q Consensus 439 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls 518 (1078)
+|++|++++|.++++.+..|..+++|++|++++|.+++..+..|..+++|++|+|++|++++..+..|.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 45566666666655555555566666666666666665566677778888888888888887777788888888888888
Q ss_pred CCccCCCcccccccccccceeeccCccccCC-CCcccccccccccccccCcccccccchhhhcccccC----eeecCCCc
Q 039595 519 LNQLSGSVPLEFGSLTELQYLDLSANKLSSS-IPKSIGNLLKLYYLNLSNNQFSHTIPIEFEKLIHLS----KLDLSHNI 593 (1078)
Q Consensus 519 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~----~L~Ls~N~ 593 (1078)
+|++++..+..+..+++|++|+|++|.+++. +|..|.++++|++|+|++|++++..+..|..+++|+ .|++++|+
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~ 188 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCc
Confidence 8888877777788888999999999988864 588888999999999999999887788888888887 89999999
Q ss_pred cCCcCCCCcccccccceeeccCccccCCcccccccCCcCcEEEcccCcCCCCCCCCc
Q 039595 594 LQEEIPPQVCNMESLEKLNLSHNNLSGFIPRCFEKMRSLSCIDICYNELQGPIPNST 650 (1078)
Q Consensus 594 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~l~l~~N~l~~~~~~~~ 650 (1078)
+++..+..+. ..+|++|+|++|++++..+..|..+++|+.|++++|++++..|...
T Consensus 189 l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~l~ 244 (276)
T 2z62_A 189 MNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 244 (276)
T ss_dssp CCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTTTH
T ss_pred ccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCchH
Confidence 9876555554 4589999999999998888888999999999999999999887543
No 326
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=1.5e-25 Score=245.26 Aligned_cols=225 Identities=25% Similarity=0.326 Sum_probs=110.4
Q ss_pred CCcEEeccCCcccccCCCCCCCCCCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeecc
Q 039595 103 HLVNLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFC 182 (1078)
Q Consensus 103 ~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~ 182 (1078)
.+..+++..+.+...+ .+..+++|+.|++++|.++. + +.++.+++|++|+|++|.+++ + +.++.+++|++|+++
T Consensus 20 ~l~~l~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~ 93 (272)
T 3rfs_A 20 ETIKANLKKKSVTDAV--TQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILT 93 (272)
T ss_dssp HHHHHHHTCSCTTSEE--CHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECT
T ss_pred HHHHHHhcCccccccc--ccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECC
Confidence 3444455555444332 23455556666666665552 2 235555666666666665553 2 244455555555555
Q ss_pred cccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCCC
Q 039595 183 HNNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSI 262 (1078)
Q Consensus 183 ~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 262 (1078)
+|.+++..|..++++++|++|+|++|++++..|..|+++++|++|+|++|++++..+..|..+++|++|+|++|++++..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 173 (272)
T 3rfs_A 94 GNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLP 173 (272)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccC
Confidence 55555444444555555555555555555444444555555555555555555444444455555555555555555444
Q ss_pred CcccCCCcccceeecccccccCccccccccccCCceeeecccCCCCCCCccccCCCccCeeeccccccCccCCCCCCC
Q 039595 263 PSIIGNLKSLHQLDLIENQLSGSIPLSFGNLSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLNGVIPPSIGN 340 (1078)
Q Consensus 263 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~ 340 (1078)
+..|+++++|++|+|++|++++..|..|..+++|+.|++++|.+.+. +++|+.|+++.|+++|.+|.+++.
T Consensus 174 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~ 244 (272)
T 3rfs_A 174 EGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGS 244 (272)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSC
T ss_pred HHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcccc
Confidence 44445555555555555555544444444444444444444443321 223444444444444444444433
No 327
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=1.1e-24 Score=239.22 Aligned_cols=224 Identities=21% Similarity=0.225 Sum_probs=112.5
Q ss_pred eccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeecccccccCCccCcccCCCCCcEEEccCCCC
Q 039595 131 LDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLYLNNNSL 210 (1078)
Q Consensus 131 L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~l 210 (1078)
.+.++.++. .+|..+. ++|++|+|++|++++..+..++.+++|++|++++|.+.+..+..|+++++|++|+|++|.+
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 88 (276)
T 2z62_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88 (276)
T ss_dssp EECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCcc
Confidence 344444444 4454443 3566666666666544444555555555555555555544444555555555555555555
Q ss_pred CCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCC-CCcccCCCcccceeecccccccCccccc
Q 039595 211 FGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGS-IPSIIGNLKSLHQLDLIENQLSGSIPLS 289 (1078)
Q Consensus 211 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 289 (1078)
++..|..|.++++|++|++++|++++..+..+.++++|++|++++|++++. +|..|+++++|++|+|++|++++..+..
T Consensus 89 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 168 (276)
T 2z62_A 89 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD 168 (276)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGG
T ss_pred CccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHH
Confidence 544445555555555555555555544444455555555555555555432 3444555555555555555554443333
Q ss_pred cccccCCceeeecccCCCCCCCccccCCCccC-eeeccccccCccCCCCCCCCCcCcEEEccCccCCCCCCccccccCCC
Q 039595 290 FGNLSSWTLMSLFSNSLSGSIPPILGNLKSLS-TLGLYLNQLNGVIPPSIGNLSSLRNLSLFNNGLYGSIPEEIGYLKSL 368 (1078)
Q Consensus 290 ~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~-~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 368 (1078)
|..+.+|+ .|. .|++++|++++..+..+.. .+|+.|++++|++++..+..+..+++|
T Consensus 169 ~~~l~~L~---------------------~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L 226 (276)
T 2z62_A 169 LRVLHQMP---------------------LLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSL 226 (276)
T ss_dssp GHHHHTCT---------------------TCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSC
T ss_pred hhhhhhcc---------------------ccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccc
Confidence 33333322 111 4555555555443333332 255555555555554444444555555
Q ss_pred CeEEcccccCc
Q 039595 369 SELKLCKNNLS 379 (1078)
Q Consensus 369 ~~L~L~~N~l~ 379 (1078)
+.|++++|++.
T Consensus 227 ~~L~l~~N~~~ 237 (276)
T 2z62_A 227 QKIWLHTNPWD 237 (276)
T ss_dssp CEEECCSSCBC
T ss_pred cEEEccCCccc
Confidence 55555555554
No 328
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=3.6e-25 Score=242.15 Aligned_cols=229 Identities=26% Similarity=0.327 Sum_probs=136.3
Q ss_pred CCCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeecccccccCCccCcccCCCCCcEEE
Q 039595 125 LSKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLY 204 (1078)
Q Consensus 125 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~ 204 (1078)
+..+..+++..+.+... ..+..+++|+.|++++|.++ .+ +.++.+++|++|++++|.+.+. ..++++++|++|+
T Consensus 18 ~~~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~-~~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~ 91 (272)
T 3rfs_A 18 FAETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIK-SV-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLI 91 (272)
T ss_dssp HHHHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCC-CC-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEE
T ss_pred HHHHHHHHhcCcccccc--cccccccceeeeeeCCCCcc-cc-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEE
Confidence 45566777777776643 34567777888888887776 33 2466666666666666666642 3566666666666
Q ss_pred ccCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCCCCcccCCCcccceeecccccccC
Q 039595 205 LNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLDLIENQLSG 284 (1078)
Q Consensus 205 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 284 (1078)
|++|.+++..+..|+++++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|+++++|++|++++|++++
T Consensus 92 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 171 (272)
T 3rfs_A 92 LTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQS 171 (272)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCc
Confidence 66666665555556666666666666666665555556666666666666666665555555566666666666666555
Q ss_pred ccccccccccCCceeeecccCCCCCCCccccCCCccCeeeccccccCccCCCCCCCCCcCcEEEccCccCCCCCCccccc
Q 039595 285 SIPLSFGNLSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLNGVIPPSIGNLSSLRNLSLFNNGLYGSIPEEIGY 364 (1078)
Q Consensus 285 ~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~ 364 (1078)
..+.. ++++++|++|++++|++++..|..+..+++|+.|++++|.+.+.
T Consensus 172 ~~~~~------------------------~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~------- 220 (272)
T 3rfs_A 172 LPEGV------------------------FDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT------- 220 (272)
T ss_dssp CCTTT------------------------TTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------
T ss_pred cCHHH------------------------hcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------
Confidence 44444 44555555555555555555454555555555555555555432
Q ss_pred cCCCCeEEcccccCccccCCCCccCC
Q 039595 365 LKSLSELKLCKNNLSGVIPHSVGNLT 390 (1078)
Q Consensus 365 l~~L~~L~L~~N~l~~~~p~~~~~l~ 390 (1078)
+++|+.|+++.|+++|.+|..++.+.
T Consensus 221 ~~~l~~l~~~~n~~~g~ip~~~~~~~ 246 (272)
T 3rfs_A 221 CPGIRYLSEWINKHSGVVRNSAGSVA 246 (272)
T ss_dssp TTTTHHHHHHHHHTGGGBBCTTSCBC
T ss_pred CcHHHHHHHHHHhCCCcccCcccccC
Confidence 23455555666666666665555444
No 329
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=3.7e-24 Score=231.22 Aligned_cols=192 Identities=26% Similarity=0.349 Sum_probs=133.0
Q ss_pred CCCcccceEeeCCCCeEEEeccCccccCCcccCCccCCCCCCcEEeccCCcccccCCCCCCCCCCcceeccCCCccCCCC
Q 039595 63 SPCSWFGISCNHAGSRVISINLSTLCLNGTFQDFSFSSFPHLVNLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLSGVI 142 (1078)
Q Consensus 63 ~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~ 142 (1078)
+||.|.|.+|.... ++++++++.+. .+|..+. +.|++|+|++|++++..
T Consensus 3 ~Cp~~~gC~C~~~~----------------------------~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~ 51 (251)
T 3m19_A 3 TCETVTGCTCNEGK----------------------------KEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLS 51 (251)
T ss_dssp -CHHHHSSEEEGGG----------------------------TEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCC
T ss_pred cCCCCCceEcCCCC----------------------------eEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccC
Confidence 58899999996322 23444555554 4555444 56777777777777666
Q ss_pred CccccCccceeEEEccCccCCCCCCcccccccccceeecccccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccC
Q 039595 143 SPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLK 222 (1078)
Q Consensus 143 p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 222 (1078)
|..|+++++|++|+|++|++++..|..+..+++|++|++++|.+++..+..|+.+++|++|+|++|++++..+..|.+++
T Consensus 52 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 131 (251)
T 3m19_A 52 DATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLT 131 (251)
T ss_dssp TTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred HhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCC
Confidence 66677777777777777777766666666667777777777776666566667777777777777777766666667777
Q ss_pred CCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCCCCcccCCCcccceeecccccccCc
Q 039595 223 SLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLDLIENQLSGS 285 (1078)
Q Consensus 223 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 285 (1078)
+|++|+|++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|++++.
T Consensus 132 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 132 KLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred cccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 777777777777766666677777777777777777766666677777777777777777643
No 330
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.91 E-value=1.1e-23 Score=230.23 Aligned_cols=179 Identities=32% Similarity=0.370 Sum_probs=81.1
Q ss_pred ceeecccccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEecccc
Q 039595 177 HEFSFCHNNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKN 256 (1078)
Q Consensus 177 ~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 256 (1078)
++|++++|++++..+..|+++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|
T Consensus 40 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 119 (270)
T 2o6q_A 40 KKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRN 119 (270)
T ss_dssp SEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSS
T ss_pred CEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCC
Confidence 33333333333333334444444444555444444333333444455555555555554444444444445555555555
Q ss_pred ccCCCCCcccCCCcccceeecccccccCccccccccccCCceeeecccCCCCCCCccccCCCccCeeeccccccCccCCC
Q 039595 257 SLSGSIPSIIGNLKSLHQLDLIENQLSGSIPLSFGNLSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLNGVIPP 336 (1078)
Q Consensus 257 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~ 336 (1078)
++++..+..|+++++|++|+|++|++++..+.. |.++++|++|+|++|++++..+.
T Consensus 120 ~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~------------------------~~~l~~L~~L~L~~n~l~~~~~~ 175 (270)
T 2o6q_A 120 QLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGV------------------------FDKLTSLKELRLYNNQLKRVPEG 175 (270)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT------------------------TTTCTTCCEEECCSSCCSCCCTT
T ss_pred ccCeeCHHHhCcCcCCCEEECCCCcCCccCHhH------------------------ccCCcccceeEecCCcCcEeChh
Confidence 544444444444444555555444444333333 33444444444444444443333
Q ss_pred CCCCCCcCcEEEccCccCCCCCCccccccCCCCeEEcccccCc
Q 039595 337 SIGNLSSLRNLSLFNNGLYGSIPEEIGYLKSLSELKLCKNNLS 379 (1078)
Q Consensus 337 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 379 (1078)
.|..+++|+.|++++|++++..+..+..+++|+.|+|++|.+.
T Consensus 176 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 176 AFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred HhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 4444444444444444444333333444445555555555443
No 331
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=2e-23 Score=230.16 Aligned_cols=202 Identities=26% Similarity=0.264 Sum_probs=94.6
Q ss_pred ccCccceeEEEccCccCCCCCCcccccccccceeecccccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCC
Q 039595 146 IGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLS 225 (1078)
Q Consensus 146 ~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 225 (1078)
++++++|+++++++|.++ .+|..+. +++++|+|++|.+++..|..|.++++|++|+|++|.+++..+. +.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 555666666666666665 4554442 3445555555555444444445555555555555544432221 3444444
Q ss_pred eeecCCcccCCCCCCcccCCCCCcEEeccccccCCCCCcccCCCcccceeecccccccCccccccccccCCceeeecccC
Q 039595 226 TLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLDLIENQLSGSIPLSFGNLSSWTLMSLFSNS 305 (1078)
Q Consensus 226 ~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~ 305 (1078)
+|+|++|+++ .+|..+..+++|++|+|++|++++..|..|.++++|++|+|++|++++
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~--------------------- 138 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKT--------------------- 138 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCC---------------------
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCc---------------------
Confidence 4444444444 233344444444444444444443333344444444444444444433
Q ss_pred CCCCCCccccCCCccCeeeccccccCccCCCCCCCCCcCcEEEccCccCCCCCCccccccCCCCeEEcccccC
Q 039595 306 LSGSIPPILGNLKSLSTLGLYLNQLNGVIPPSIGNLSSLRNLSLFNNGLYGSIPEEIGYLKSLSELKLCKNNL 378 (1078)
Q Consensus 306 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 378 (1078)
..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|+++ .+|..+..+.+|+.|+|++|.+
T Consensus 139 ---~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~ 207 (290)
T 1p9a_G 139 ---LPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPW 207 (290)
T ss_dssp ---CCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCB
T ss_pred ---cChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCc
Confidence 33333444444444444444444443344444455555555555554 3444444444445555554444
No 332
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=2.3e-23 Score=229.66 Aligned_cols=203 Identities=22% Similarity=0.259 Sum_probs=167.5
Q ss_pred CCCCCCCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeecccccccCCccCcccCCCCC
Q 039595 121 QIGNLSKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKL 200 (1078)
Q Consensus 121 ~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L 200 (1078)
.++++++|+++++++|+++ .+|..+. ++|++|+|++|.+++..|..+..+++|++|+|++|.+++. |.. +.+++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~-~~l~~L 79 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QVD-GTLPVL 79 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-ECC-SCCTTC
T ss_pred cccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-cCC-CCCCcC
Confidence 3678999999999999998 6787765 7899999999999988889999999999999999999964 433 899999
Q ss_pred cEEEccCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCCCCcccCCCcccceeecccc
Q 039595 201 ALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLDLIEN 280 (1078)
Q Consensus 201 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 280 (1078)
++|+|++|+++ .+|..+.++++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|..+++|+.|+|++|
T Consensus 80 ~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 158 (290)
T 1p9a_G 80 GTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158 (290)
T ss_dssp CEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred CEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCC
Confidence 99999999998 67888999999999999999999988899999999999999999999888888999999999999999
Q ss_pred cccCccccccccccCCceeeecccCCCCCCCccccCCCccCeeecccccc
Q 039595 281 QLSGSIPLSFGNLSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQL 330 (1078)
Q Consensus 281 ~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l 330 (1078)
++++..+..|..+++|+.|++++|+++ .+|..+..+.+|+.|+|++|.+
T Consensus 159 ~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~ 207 (290)
T 1p9a_G 159 NLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPW 207 (290)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCB
T ss_pred cCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCc
Confidence 998665555555555555555555555 3344444444444444444443
No 333
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.90 E-value=8.5e-25 Score=261.37 Aligned_cols=187 Identities=14% Similarity=0.189 Sum_probs=146.6
Q ss_pred CccceeccCCceeEEEEEeCCCCEEEEEEeccccccCC----hhhHHHHHHHHHHHhcCCCCceeeEEeeeecCCeeEEE
Q 039595 754 DEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGN----MADQDEFLNVVLALNEIRHRNIVKFHGFCSNARHSFLV 829 (1078)
Q Consensus 754 ~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 829 (1078)
...+.||+|+||+||+|.. .++.+|+|+......... ....+.+.+|+.++++++||||+++..++...+..|+|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3456899999999999954 478899998755332211 11235589999999999999999666666677778999
Q ss_pred EeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccccccC
Q 039595 830 CEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVEP 909 (1078)
Q Consensus 830 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~~ 909 (1078)
|||+++|+|.++++. +..++.|++.||+|||++ +|+||||||+|||++. .+||+|||+++....
T Consensus 418 mE~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 418 MSYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp EECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred EECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 999999999999943 568999999999999999 9999999999999998 999999999997754
Q ss_pred CCCC-------ceeecccccccccccccc--CCCCccchhHHHHHHHHHHHhCCCCC
Q 039595 910 YSSN-------RTEFVGTFGYAAPEIAYT--MRATEKYDVYSFGVLVFEVIKGNHPR 957 (1078)
Q Consensus 910 ~~~~-------~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlG~il~elltG~~p~ 957 (1078)
.... .....||+.|||||++.. ..|+..+|+||..+-..+-..++.+|
T Consensus 482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 482 DEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred ccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 2211 135689999999999987 56888899999999888888877774
No 334
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=6.8e-24 Score=236.89 Aligned_cols=224 Identities=20% Similarity=0.238 Sum_probs=163.3
Q ss_pred CcceeccCCCccCCCCCc---cccCccceeEEEccCccCCCCCCccc--ccccccceeecccccccCCcc----CcccCC
Q 039595 127 KLQNLDLGNNQLSGVISP---EIGKLNQLRRLYLDMNQLHGTIPPVI--GQLSLIHEFSFCHNNVSGRIP----SSLGNL 197 (1078)
Q Consensus 127 ~L~~L~Ls~n~l~~~~p~---~~~~l~~L~~L~L~~n~l~~~~p~~i--~~l~~L~~L~l~~n~~~~~~p----~~l~~l 197 (1078)
.++.|.+.++.++...-. .+..+++|++|+|++|.+++.+|..+ +.+++|++|++++|.+++..| ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 456666666655421100 12234567777777777777777776 777777777777777776554 344568
Q ss_pred CCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcccCCC---C-CCcccCCCCCcEEeccccccCCCCCc----ccCCC
Q 039595 198 SKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGL---I-PCTLDNLSNLDTLFLYKNSLSGSIPS----IIGNL 269 (1078)
Q Consensus 198 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~---~-p~~l~~l~~L~~L~L~~N~l~~~~p~----~~~~l 269 (1078)
++|++|+|++|++++..|..|+++++|++|+|++|++.+. . +..+..+++|++|+|++|+++ .++. .++++
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAG 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcC
Confidence 8888888888888877778888888888888888887642 1 223467888888888888887 3333 25677
Q ss_pred cccceeecccccccCccccccccc---cCCceeeecccCCCCCCCccccCCCccCeeeccccccCccCCCCCCCCCcCcE
Q 039595 270 KSLHQLDLIENQLSGSIPLSFGNL---SSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLNGVIPPSIGNLSSLRN 346 (1078)
Q Consensus 270 ~~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 346 (1078)
++|++|+|++|++++..|..+..+ ++|+.|++++|+++ .+|..+. ++|++|+|++|++++. |. +..+++|+.
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~ 298 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDN 298 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSC
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccE
Confidence 888888888888888777777766 58888888888888 5666664 7899999999999865 33 678899999
Q ss_pred EEccCccCCC
Q 039595 347 LSLFNNGLYG 356 (1078)
Q Consensus 347 L~Ls~N~l~~ 356 (1078)
|++++|.+++
T Consensus 299 L~L~~N~l~~ 308 (310)
T 4glp_A 299 LTLDGNPFLV 308 (310)
T ss_dssp EECSSTTTSC
T ss_pred EECcCCCCCC
Confidence 9999998874
No 335
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.90 E-value=6.2e-26 Score=256.82 Aligned_cols=267 Identities=16% Similarity=0.180 Sum_probs=151.2
Q ss_pred CCcccceEeeCCCCeEEEeccCccccCCcccCCccCCC--CCCcEEeccCCcccccCCCCCCCCCCcceeccCCCccCCC
Q 039595 64 PCSWFGISCNHAGSRVISINLSTLCLNGTFQDFSFSSF--PHLVNLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLSGV 141 (1078)
Q Consensus 64 ~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l--~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~ 141 (1078)
|.+|.++.|+.. .+..+++++..+.. ..+..+ +.++.|++++|.+.+..+. +..+++|++|+|++|.+++.
T Consensus 36 c~~W~~~~~~~~--~~~~l~l~~~~~~~----~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~ 108 (336)
T 2ast_B 36 CKRWYRLASDES--LWQTLDLTGKNLHP----DVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVS 108 (336)
T ss_dssp CHHHHHHHTCST--TSSEEECTTCBCCH----HHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHH
T ss_pred HHHHHHHhcCch--hheeeccccccCCH----HHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHH
Confidence 558999988632 45566666654432 234444 6677777777777655444 45667777777777766654
Q ss_pred -CCccccCccceeEEEccCccCCCCCCcccccccccceeecccc-cccCC-ccCcccCCCCCcEEEccCC-CCCCC-CCC
Q 039595 142 -ISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHN-NVSGR-IPSSLGNLSKLALLYLNNN-SLFGY-IPT 216 (1078)
Q Consensus 142 -~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n-~~~~~-~p~~l~~l~~L~~L~L~~n-~l~~~-~p~ 216 (1078)
+|..+..+++|++|+|++|.+++..|..++.+++|++|++++| .+++. +|..+.++++|++|+|++| .+++. ++.
T Consensus 109 ~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~ 188 (336)
T 2ast_B 109 TLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQV 188 (336)
T ss_dssp HHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHH
T ss_pred HHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHH
Confidence 5566666777777777777666666666666666666666666 45442 4555566666666666666 55532 344
Q ss_pred cccccC-CCCeeecCCc--ccC-CCCCCcccCCCCCcEEeccccc-cCCCCCcccCCCcccceeecccccccCccccccc
Q 039595 217 VMGNLK-SLSTLDLSQN--QLN-GLIPCTLDNLSNLDTLFLYKNS-LSGSIPSIIGNLKSLHQLDLIENQLSGSIPLSFG 291 (1078)
Q Consensus 217 ~~~~l~-~L~~L~L~~N--~l~-~~~p~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 291 (1078)
.+..++ +|++|+|++| .++ +.+|..+..+++|++|++++|. +++..+..+.++++|++|++++|. +..+.
T Consensus 189 ~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~--~~~~~--- 263 (336)
T 2ast_B 189 AVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY--DIIPE--- 263 (336)
T ss_dssp HHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT--TCCGG---
T ss_pred HHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC--CCCHH---
Confidence 455566 6666666666 333 2334445555566666666555 444444455555555555555553 11121
Q ss_pred cccCCceeeecccCCCCCCCccccCCCccCeeeccccccCccCCCCCCCC-CcCcEEEccCccCCCCCCccccc
Q 039595 292 NLSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLNGVIPPSIGNL-SSLRNLSLFNNGLYGSIPEEIGY 364 (1078)
Q Consensus 292 ~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l-~~L~~L~Ls~N~l~~~~p~~~~~ 364 (1078)
....++++++|++|++++| ++ ...+..+ .+|+.|++++|++++..|..++.
T Consensus 264 ------------------~~~~l~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 264 ------------------TLLELGEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp ------------------GGGGGGGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred ------------------HHHHHhcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEecccCccccCCcccc
Confidence 1113445555666666555 22 1223333 23555556666666666555543
No 336
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=1.9e-25 Score=255.35 Aligned_cols=257 Identities=19% Similarity=0.172 Sum_probs=196.4
Q ss_pred EEeccCCcccccCCCCCCCCCCcceeccCCCccCCCCC----ccccCcc-ceeEEEccCccCCCCCCcccccc-----cc
Q 039595 106 NLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLSGVIS----PEIGKLN-QLRRLYLDMNQLHGTIPPVIGQL-----SL 175 (1078)
Q Consensus 106 ~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p----~~~~~l~-~L~~L~L~~n~l~~~~p~~i~~l-----~~ 175 (1078)
+++|++|.++|.+|..+...++|++|||++|.+++..+ ..+.+++ +|++|+|++|.+++..+..++.+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46788888988888877777789999999999887666 6677888 89999999999988778888776 88
Q ss_pred cceeecccccccCCccCcccCC-----CCCcEEEccCCCCCCCCCCcccc-----cCCCCeeecCCcccCCCC----CCc
Q 039595 176 IHEFSFCHNNVSGRIPSSLGNL-----SKLALLYLNNNSLFGYIPTVMGN-----LKSLSTLDLSQNQLNGLI----PCT 241 (1078)
Q Consensus 176 L~~L~l~~n~~~~~~p~~l~~l-----~~L~~L~L~~n~l~~~~p~~~~~-----l~~L~~L~L~~N~l~~~~----p~~ 241 (1078)
|++|+|++|.+++..+..++.. ++|++|+|++|++++..+..++. .++|++|+|++|++++.. +..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 9999999999887777655443 88999999999988766555433 268999999999988543 333
Q ss_pred ccCCC-CCcEEeccccccCCCCCcccC----CC-cccceeecccccccCc----ccccccc-ccCCceeeecccCCCCCC
Q 039595 242 LDNLS-NLDTLFLYKNSLSGSIPSIIG----NL-KSLHQLDLIENQLSGS----IPLSFGN-LSSWTLMSLFSNSLSGSI 310 (1078)
Q Consensus 242 l~~l~-~L~~L~L~~N~l~~~~p~~~~----~l-~~L~~L~Ls~N~l~~~----~p~~~~~-l~~L~~L~l~~n~l~~~~ 310 (1078)
+..++ +|++|+|++|++++..+..+. .+ ++|++|+|++|.+++. ++..+.. .++|+.|+|++|.+++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 45555 899999999999876665443 34 5899999999998863 4555555 358889999999888654
Q ss_pred C----ccccCCCccCeeeccccccCcc-------CCCCCCCCCcCcEEEccCccCCCCCCccc
Q 039595 311 P----PILGNLKSLSTLGLYLNQLNGV-------IPPSIGNLSSLRNLSLFNNGLYGSIPEEI 362 (1078)
Q Consensus 311 p----~~l~~l~~L~~L~L~~N~l~~~-------~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~ 362 (1078)
+ ..+..+++|++|+|++|.+.+. ++..+..+++|+.|++++|.+.+..+..+
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~~~ 304 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSIPI 304 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCHHH
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchHHH
Confidence 4 3457778899999999985433 23467788888899999988876644433
No 337
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=6.9e-23 Score=219.51 Aligned_cols=178 Identities=16% Similarity=0.220 Sum_probs=98.2
Q ss_pred CCcEEeccCCcccccCCCCCCCCCCcceeccCCCc-cCCCCCccccCccceeEEEccC-ccCCCCCCcccccccccceee
Q 039595 103 HLVNLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQ-LSGVISPEIGKLNQLRRLYLDM-NQLHGTIPPVIGQLSLIHEFS 180 (1078)
Q Consensus 103 ~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~-l~~~~p~~~~~l~~L~~L~L~~-n~l~~~~p~~i~~l~~L~~L~ 180 (1078)
.|++|+|++|.+++..+..|+++++|++|+|++|+ +++..+..|+++++|++|+|++ |++++..|..++.+++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 67777777777766555567777777777777775 6644444666677777777766 666643344555555555555
Q ss_pred cccccccCCccCcccCCCCCc---EEEccCC-CCCCCCCCcccccCCCC-eeecCCcccCCCCCCcccCCCCCcEEeccc
Q 039595 181 FCHNNVSGRIPSSLGNLSKLA---LLYLNNN-SLFGYIPTVMGNLKSLS-TLDLSQNQLNGLIPCTLDNLSNLDTLFLYK 255 (1078)
Q Consensus 181 l~~n~~~~~~p~~l~~l~~L~---~L~L~~n-~l~~~~p~~~~~l~~L~-~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~ 255 (1078)
+++|.+++ +|. ++.+++|+ +|++++| ++++..+..|.++++|+ +|++++|+++...+..|.. ++|++|+|++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~ 188 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNK 188 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTT
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCC
Confidence 55555554 443 55555554 5555555 55444444455555555 5555555555322222222 4455555555
Q ss_pred cc-cCCCCCcccCCC-cccceeeccccccc
Q 039595 256 NS-LSGSIPSIIGNL-KSLHQLDLIENQLS 283 (1078)
Q Consensus 256 N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~ 283 (1078)
|+ +++..+..|.++ ++|+.|++++|+++
T Consensus 189 n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~ 218 (239)
T 2xwt_C 189 NKYLTVIDKDAFGGVYSGPSLLDVSQTSVT 218 (239)
T ss_dssp CTTCCEECTTTTTTCSBCCSEEECTTCCCC
T ss_pred CCCcccCCHHHhhccccCCcEEECCCCccc
Confidence 52 443334444444 44555555554444
No 338
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=1.7e-24 Score=247.36 Aligned_cols=251 Identities=19% Similarity=0.203 Sum_probs=157.1
Q ss_pred EEcccccCccccCCCCccCCCCceeecccCcCCCCCC----ccccccC-CCCeEEccCccccccchhhccCC-----CCC
Q 039595 371 LKLCKNNLSGVIPHSVGNLTGLVLLNMCENHLFGPIP----KSLKSLT-SLKRVRFNQNNLVGKVYEAFGDH-----PNL 440 (1078)
Q Consensus 371 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~----~~l~~l~-~L~~L~L~~N~l~~~~~~~~~~l-----~~L 440 (1078)
++++.|.+++.+|..+...++|++|++++|.+.+..+ ..|..++ +|++|++++|.+.......+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4566677766666655555556666666666665555 4555555 56666666666555544444433 555
Q ss_pred cEecCCCCccCCccCccccCCCCCceecccccccCCCCCccc----cCC-CcccEEeccCCccCCCccccccc-----Cc
Q 039595 441 TFLDLSQNNFDGKISFNWRNLPKLDTFIVSMNNIFGSIPLEI----GDS-SKLQFLDLSSNHIVGKIPVQLEK-----LF 510 (1078)
Q Consensus 441 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~----~~l-~~L~~L~Ls~N~i~~~~~~~~~~-----l~ 510 (1078)
++|+|++|.++ +..+..+ ..+ ++|++|+|++|+|++..+..+.. .+
T Consensus 83 ~~L~Ls~n~l~------------------------~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~ 138 (362)
T 3goz_A 83 TSLNLSGNFLS------------------------YKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPA 138 (362)
T ss_dssp CEEECCSSCGG------------------------GSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCT
T ss_pred cEEECcCCcCC------------------------hHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCC
Confidence 55555555554 3333322 223 56777777777777655544432 24
Q ss_pred cCcEEeccCCccCCCccc----cccccc-ccceeeccCccccCCCCcccccc-----cccccccccCcccccc----cch
Q 039595 511 SLNKLILSLNQLSGSVPL----EFGSLT-ELQYLDLSANKLSSSIPKSIGNL-----LKLYYLNLSNNQFSHT----IPI 576 (1078)
Q Consensus 511 ~L~~L~Ls~N~l~~~~~~----~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l-----~~L~~L~Ls~N~l~~~----~~~ 576 (1078)
+|++|+|++|++++..+. .+..++ +|++|+|++|.|++..+..+... ++|++|+|++|+|++. ++.
T Consensus 139 ~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~ 218 (362)
T 3goz_A 139 SITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAY 218 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHH
T ss_pred ceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHH
Confidence 777777777777743333 334444 78888888888876666544433 5788888888888753 344
Q ss_pred hhhc-ccccCeeecCCCccCCcCC----CCcccccccceeeccCccccCCc-------ccccccCCcCcEEEcccCcCCC
Q 039595 577 EFEK-LIHLSKLDLSHNILQEEIP----PQVCNMESLEKLNLSHNNLSGFI-------PRCFEKMRSLSCIDICYNELQG 644 (1078)
Q Consensus 577 ~~~~-l~~L~~L~Ls~N~l~~~~~----~~~~~l~~L~~L~L~~N~l~~~~-------~~~l~~l~~L~~l~l~~N~l~~ 644 (1078)
.+.. .++|+.|||++|+|++..+ ..+..+++|++|+|++|++.+.. +..+..+++|+.||+++|++..
T Consensus 219 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~ 298 (362)
T 3goz_A 219 IFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHP 298 (362)
T ss_dssp HHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCG
T ss_pred HHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCC
Confidence 4555 3478888888888876443 23456678888888888855443 3356677888888888888775
Q ss_pred C
Q 039595 645 P 645 (1078)
Q Consensus 645 ~ 645 (1078)
.
T Consensus 299 ~ 299 (362)
T 3goz_A 299 S 299 (362)
T ss_dssp G
T ss_pred c
Confidence 4
No 339
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=1.4e-23 Score=234.24 Aligned_cols=225 Identities=20% Similarity=0.185 Sum_probs=167.8
Q ss_pred ceeEEEccCccCCCC-CCc--ccccccccceeecccccccCCccCcc--cCCCCCcEEEccCCCCCCCCC----Cccccc
Q 039595 151 QLRRLYLDMNQLHGT-IPP--VIGQLSLIHEFSFCHNNVSGRIPSSL--GNLSKLALLYLNNNSLFGYIP----TVMGNL 221 (1078)
Q Consensus 151 ~L~~L~L~~n~l~~~-~p~--~i~~l~~L~~L~l~~n~~~~~~p~~l--~~l~~L~~L~L~~n~l~~~~p----~~~~~l 221 (1078)
.++.|.+..+.++.. +.. ....+++|++|++++|.+.+.+|..+ +.+++|++|+|++|++++..| ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 467777777766521 111 12234668888888888888888887 888888888888888887655 344568
Q ss_pred CCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCC--C--CcccCCCcccceeecccccccCccc--c-cccccc
Q 039595 222 KSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGS--I--PSIIGNLKSLHQLDLIENQLSGSIP--L-SFGNLS 294 (1078)
Q Consensus 222 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~--~--p~~~~~l~~L~~L~Ls~N~l~~~~p--~-~~~~l~ 294 (1078)
++|++|+|++|++++..|..|..+++|++|+|++|++.+. + +..++++++|++|+|++|++++..+ . .++.++
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~ 224 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGV 224 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTC
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCC
Confidence 8888888888888888778888888888888888887642 1 2334678888888888888863222 1 356778
Q ss_pred CCceeeecccCCCCCCCccccCC---CccCeeeccccccCccCCCCCCCCCcCcEEEccCccCCCCCCccccccCCCCeE
Q 039595 295 SWTLMSLFSNSLSGSIPPILGNL---KSLSTLGLYLNQLNGVIPPSIGNLSSLRNLSLFNNGLYGSIPEEIGYLKSLSEL 371 (1078)
Q Consensus 295 ~L~~L~l~~n~l~~~~p~~l~~l---~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 371 (1078)
+|+.|+|++|.+++..|..+..+ ++|++|+|++|+++ .+|..+. ++|+.|+|++|++++. |. +..+++|+.|
T Consensus 225 ~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L 299 (310)
T 4glp_A 225 QPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNL 299 (310)
T ss_dssp CCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCE
T ss_pred CCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEE
Confidence 88888888888888777777766 58888888888888 4566664 7888888888888853 33 6777888888
Q ss_pred EcccccCcc
Q 039595 372 KLCKNNLSG 380 (1078)
Q Consensus 372 ~L~~N~l~~ 380 (1078)
+|++|+++.
T Consensus 300 ~L~~N~l~~ 308 (310)
T 4glp_A 300 TLDGNPFLV 308 (310)
T ss_dssp ECSSTTTSC
T ss_pred ECcCCCCCC
Confidence 888888863
No 340
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=5.9e-23 Score=220.05 Aligned_cols=178 Identities=16% Similarity=0.243 Sum_probs=78.1
Q ss_pred ccceeecccccccCCccCcccCCCCCcEEEccCCC-CCCCCCCcccccCCCCeeecCC-cccCCCCCCcccCCCCCcEEe
Q 039595 175 LIHEFSFCHNNVSGRIPSSLGNLSKLALLYLNNNS-LFGYIPTVMGNLKSLSTLDLSQ-NQLNGLIPCTLDNLSNLDTLF 252 (1078)
Q Consensus 175 ~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~l~~l~~L~~L~ 252 (1078)
+|++|++++|++++..+..|+++++|++|+|++|+ +++..+..|.++++|++|+|++ |++++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 34444444444443333344444555555555553 4433333444455555555554 445444444444455555555
Q ss_pred ccccccCCCCCcccCCCcccc---eeecccc-cccCccccccccccCCc-eeeecccCCCCCCCccccCCCccCeeeccc
Q 039595 253 LYKNSLSGSIPSIIGNLKSLH---QLDLIEN-QLSGSIPLSFGNLSSWT-LMSLFSNSLSGSIPPILGNLKSLSTLGLYL 327 (1078)
Q Consensus 253 L~~N~l~~~~p~~~~~l~~L~---~L~Ls~N-~l~~~~p~~~~~l~~L~-~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~ 327 (1078)
+++|++++ +|. |+.+++|+ +|++++| ++++..+..|..+++|+ .|++++|.++...+..+.. ++|+.|++++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~ 188 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNK 188 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTT
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCC
Confidence 55555543 333 44444444 5555554 44443333344444444 4444444443111112222 4444444444
Q ss_pred cc-cCccCCCCCCCC-CcCcEEEccCccCC
Q 039595 328 NQ-LNGVIPPSIGNL-SSLRNLSLFNNGLY 355 (1078)
Q Consensus 328 N~-l~~~~p~~l~~l-~~L~~L~Ls~N~l~ 355 (1078)
|+ +++..+..|..+ ++|+.|++++|+++
T Consensus 189 n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~ 218 (239)
T 2xwt_C 189 NKYLTVIDKDAFGGVYSGPSLLDVSQTSVT 218 (239)
T ss_dssp CTTCCEECTTTTTTCSBCCSEEECTTCCCC
T ss_pred CCCcccCCHHHhhccccCCcEEECCCCccc
Confidence 42 444334444444 44444444444444
No 341
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=1.7e-24 Score=245.00 Aligned_cols=233 Identities=15% Similarity=0.183 Sum_probs=112.3
Q ss_pred cceeEEEccCccCCCCCCcccccccccceeecccccccCC-ccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeee
Q 039595 150 NQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGR-IPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLD 228 (1078)
Q Consensus 150 ~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~-~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 228 (1078)
++++.|++++|.+++..|. +..+++|++|++++|.+++. +|..+..+++|++|+|++|.+++..|..++.+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 3344444444444332222 22344444444444444333 444444445555555555554444444444455555555
Q ss_pred cCCc-ccCCC-CCCcccCCCCCcEEecccc-ccCCC-CCcccCCCc-ccceeecccc--ccc-CccccccccccCCceee
Q 039595 229 LSQN-QLNGL-IPCTLDNLSNLDTLFLYKN-SLSGS-IPSIIGNLK-SLHQLDLIEN--QLS-GSIPLSFGNLSSWTLMS 300 (1078)
Q Consensus 229 L~~N-~l~~~-~p~~l~~l~~L~~L~L~~N-~l~~~-~p~~~~~l~-~L~~L~Ls~N--~l~-~~~p~~~~~l~~L~~L~ 300 (1078)
|++| .+++. ++..+.++++|++|++++| .+++. ++..+..++ +|++|+|++| .++ +.+|..+..+++|+.|+
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~ 228 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLD 228 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEE
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEe
Confidence 5555 34431 3333445555555555555 55432 344455555 5666666555 333 23444445555555555
Q ss_pred ecccC-CCCCCCccccCCCccCeeeccccc-cCccCCCCCCCCCcCcEEEccCccCCCCCCcccccc-CCCCeEEccccc
Q 039595 301 LFSNS-LSGSIPPILGNLKSLSTLGLYLNQ-LNGVIPPSIGNLSSLRNLSLFNNGLYGSIPEEIGYL-KSLSELKLCKNN 377 (1078)
Q Consensus 301 l~~n~-l~~~~p~~l~~l~~L~~L~L~~N~-l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~L~~N~ 377 (1078)
+++|. +++..+..+.++++|++|++++|. +.......++++++|+.|++++| +.. ..+..+ .+++.|++++|+
T Consensus 229 l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~~---~~~~~l~~~l~~L~l~~n~ 304 (336)
T 2ast_B 229 LSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPD---GTLQLLKEALPHLQINCSH 304 (336)
T ss_dssp CTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCT---TCHHHHHHHSTTSEESCCC
T ss_pred CCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cCH---HHHHHHHhhCcceEEeccc
Confidence 55555 444445555666666666666664 22111124555666666666666 322 122332 235555566666
Q ss_pred CccccCCCCc
Q 039595 378 LSGVIPHSVG 387 (1078)
Q Consensus 378 l~~~~p~~~~ 387 (1078)
+++..|..++
T Consensus 305 l~~~~~~~~~ 314 (336)
T 2ast_B 305 FTTIARPTIG 314 (336)
T ss_dssp SCCTTCSSCS
T ss_pred CccccCCccc
Confidence 6666555544
No 342
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=3.4e-25 Score=255.74 Aligned_cols=251 Identities=18% Similarity=0.225 Sum_probs=122.3
Q ss_pred cCCCCCCCCCCcceeccCCCccCCCCC----ccccCccceeEEEccCc---cCCCCCCcccccccccceeecccccccCC
Q 039595 117 NIPPQIGNLSKLQNLDLGNNQLSGVIS----PEIGKLNQLRRLYLDMN---QLHGTIPPVIGQLSLIHEFSFCHNNVSGR 189 (1078)
Q Consensus 117 ~~p~~~~~l~~L~~L~Ls~n~l~~~~p----~~~~~l~~L~~L~L~~n---~l~~~~p~~i~~l~~L~~L~l~~n~~~~~ 189 (1078)
.++..+..+++|++|+|++|++++..+ ..+..+++|++|+|++| ++++.+|..+..+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l---------------- 86 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLL---------------- 86 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHH----------------
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHH----------------
Confidence 355566666777777777777765432 33556777777777664 3334444443111
Q ss_pred ccCcccCCCCCcEEEccCCCCCC----CCCCcccccCCCCeeecCCcccCCCCCCccc----CC---------CCCcEEe
Q 039595 190 IPSSLGNLSKLALLYLNNNSLFG----YIPTVMGNLKSLSTLDLSQNQLNGLIPCTLD----NL---------SNLDTLF 252 (1078)
Q Consensus 190 ~p~~l~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~----~l---------~~L~~L~ 252 (1078)
...+.++++|++|+|++|.+++ .+|..+.++++|++|+|++|.+++..+..+. .+ ++|++|+
T Consensus 87 -~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~ 165 (386)
T 2ca6_A 87 -LQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSII 165 (386)
T ss_dssp -HHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEE
T ss_pred -HHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEE
Confidence 1222455555555555555554 2444455555555555555555432222222 12 4455555
Q ss_pred ccccccC-CCCC---cccCCCcccceeecccccccCccccccccccCCceeeecccCCCC---CCCccccCCCccCeeec
Q 039595 253 LYKNSLS-GSIP---SIIGNLKSLHQLDLIENQLSGSIPLSFGNLSSWTLMSLFSNSLSG---SIPPILGNLKSLSTLGL 325 (1078)
Q Consensus 253 L~~N~l~-~~~p---~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~---~~p~~l~~l~~L~~L~L 325 (1078)
|++|+++ +.+| ..+..+++|++|+|++|+++.. | ..|..+.++++|++|+|
T Consensus 166 L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~----------------------g~~~l~~~~l~~~~~L~~L~L 223 (386)
T 2ca6_A 166 CGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPE----------------------GIEHLLLEGLAYCQELKVLDL 223 (386)
T ss_dssp CCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHH----------------------HHHHHHHTTGGGCTTCCEEEC
T ss_pred CCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHh----------------------HHHHHHHHHhhcCCCccEEEC
Confidence 5555444 1222 2333444444444444444310 0 11223344444444444
Q ss_pred cccccC----ccCCCCCCCCCcCcEEEccCccCCCC----CCcccc--ccCCCCeEEcccccCcc----ccCCCC-ccCC
Q 039595 326 YLNQLN----GVIPPSIGNLSSLRNLSLFNNGLYGS----IPEEIG--YLKSLSELKLCKNNLSG----VIPHSV-GNLT 390 (1078)
Q Consensus 326 ~~N~l~----~~~p~~l~~l~~L~~L~Ls~N~l~~~----~p~~~~--~l~~L~~L~L~~N~l~~----~~p~~~-~~l~ 390 (1078)
++|.++ +.+|..+..+++|+.|+|++|.+++. ++..+. .+++|++|+|++|.+++ .+|..+ .+++
T Consensus 224 s~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~ 303 (386)
T 2ca6_A 224 QDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMP 303 (386)
T ss_dssp CSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCT
T ss_pred cCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCC
Confidence 444443 23344444455555555555555433 333342 25556666666665554 244444 4456
Q ss_pred CCceeecccCcCCCCC
Q 039595 391 GLVLLNMCENHLFGPI 406 (1078)
Q Consensus 391 ~L~~L~L~~N~l~~~~ 406 (1078)
+|++|++++|++++..
T Consensus 304 ~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 304 DLLFLELNGNRFSEED 319 (386)
T ss_dssp TCCEEECTTSBSCTTS
T ss_pred CceEEEccCCcCCcch
Confidence 6666666666665544
No 343
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.88 E-value=4.3e-22 Score=208.39 Aligned_cols=186 Identities=26% Similarity=0.308 Sum_probs=108.5
Q ss_pred CCCcccceEeeCCCCeEEEeccCccccCCcccCCccCCCCCCcEEeccCCcccccCCCCCCCCCCcceeccCCCccCCCC
Q 039595 63 SPCSWFGISCNHAGSRVISINLSTLCLNGTFQDFSFSSFPHLVNLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLSGVI 142 (1078)
Q Consensus 63 ~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~ 142 (1078)
..|.|.+|.|+..+- + ..+.+-.++|++|+|++|.+.+..+..++++++|++|+|++|++++..
T Consensus 5 C~C~~~~v~c~~~~l--~--------------~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 68 (208)
T 2o6s_A 5 CSCSGTTVECYSQGR--T--------------SVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLP 68 (208)
T ss_dssp CEEETTEEECCSSCC--S--------------SCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCC
T ss_pred CEECCCEEEecCCCc--c--------------CCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccC
Confidence 348999999975321 0 011122345666666666665444444555666666666666655443
Q ss_pred CccccCccceeEEEccCccCCCCCCcccccccccceeecccccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccC
Q 039595 143 SPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLK 222 (1078)
Q Consensus 143 p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 222 (1078)
+..|+.+++|++|+|++|+++ +..+..++++++|++|+|++|++++..+..|.+++
T Consensus 69 ~~~~~~l~~L~~L~Ls~n~l~------------------------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 124 (208)
T 2o6s_A 69 NGVFNKLTSLTYLNLSTNQLQ------------------------SLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLT 124 (208)
T ss_dssp TTTTTTCTTCCEEECCSSCCC------------------------CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred hhhcCCCCCcCEEECCCCcCC------------------------ccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCC
Confidence 344455555555555555555 33334455566666666666666655555566666
Q ss_pred CCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCCCCcccCCCcccceeecccccccCccccccccccC
Q 039595 223 SLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLDLIENQLSGSIPLSFGNLSS 295 (1078)
Q Consensus 223 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 295 (1078)
+|++|+|++|++++..+..|..+++|++|+|++|.+.+ .+++|++|+++.|+++|.+|..++.++.
T Consensus 125 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 125 QLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred cCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 66666666666665555556666666666666665553 2345666777777777777766665544
No 344
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=8.2e-22 Score=212.73 Aligned_cols=178 Identities=24% Similarity=0.286 Sum_probs=100.9
Q ss_pred CcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeecccccccCCccCcccCCCCCcEEEcc
Q 039595 127 KLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLYLN 206 (1078)
Q Consensus 127 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~ 206 (1078)
..++++++++.++ .+|..+. ++|++|+|++|.+++..|..++.+++|++|+|++|.+++..|..|.++++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 4556667766666 4555554 466666666666665555556666666666666666665555555556666666666
Q ss_pred CCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCCCCcccCCCcccceeecccccccCcc
Q 039595 207 NNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLDLIENQLSGSI 286 (1078)
Q Consensus 207 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 286 (1078)
+|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|+++++|++|+|++|++++..
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 171 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVP 171 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccC
Confidence 66655555555555555666666665555554444555555555555555555444445555555555555555555444
Q ss_pred ccccccccCCceeeecccCCC
Q 039595 287 PLSFGNLSSWTLMSLFSNSLS 307 (1078)
Q Consensus 287 p~~~~~l~~L~~L~l~~n~l~ 307 (1078)
+..|..+++|+.|++++|.+.
T Consensus 172 ~~~~~~l~~L~~L~l~~N~~~ 192 (251)
T 3m19_A 172 HGAFDRLGKLQTITLFGNQFD 192 (251)
T ss_dssp TTTTTTCTTCCEEECCSCCBC
T ss_pred HHHHhCCCCCCEEEeeCCcee
Confidence 444444444444444444443
No 345
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.87 E-value=4.3e-25 Score=254.90 Aligned_cols=235 Identities=18% Similarity=0.192 Sum_probs=159.1
Q ss_pred cccCCCCCcEEEccCCC---CCCCCCCcc-------cccCCCCeeecCCcccCC----CCCCcccCCCCCcEEecccccc
Q 039595 193 SLGNLSKLALLYLNNNS---LFGYIPTVM-------GNLKSLSTLDLSQNQLNG----LIPCTLDNLSNLDTLFLYKNSL 258 (1078)
Q Consensus 193 ~l~~l~~L~~L~L~~n~---l~~~~p~~~-------~~l~~L~~L~L~~N~l~~----~~p~~l~~l~~L~~L~L~~N~l 258 (1078)
.+..+++|++|+|++|. +++.+|..+ ..+++|++|+|++|++++ .+|..+..+++|++|+|++|.+
T Consensus 55 ~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l 134 (386)
T 2ca6_A 55 NIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGL 134 (386)
T ss_dssp TTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCC
T ss_pred HHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCC
Confidence 35556666666666643 333344333 455666666666666654 2444455555555555555555
Q ss_pred CCCCCcccCCCcccceeecccccccCccccccccc---------cCCceeeecccCCC-CCCC---ccccCCCccCeeec
Q 039595 259 SGSIPSIIGNLKSLHQLDLIENQLSGSIPLSFGNL---------SSWTLMSLFSNSLS-GSIP---PILGNLKSLSTLGL 325 (1078)
Q Consensus 259 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l---------~~L~~L~l~~n~l~-~~~p---~~l~~l~~L~~L~L 325 (1078)
++..+..+.. .+..+ ++|+.|++++|.++ +.++ ..+..+++|++|+|
T Consensus 135 ~~~~~~~l~~--------------------~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L 194 (386)
T 2ca6_A 135 GPQAGAKIAR--------------------ALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKM 194 (386)
T ss_dssp HHHHHHHHHH--------------------HHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEEC
T ss_pred CHHHHHHHHH--------------------HHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEEC
Confidence 4222222211 11112 56666666666665 3334 46778889999999
Q ss_pred cccccC--c---cCCCCCCCCCcCcEEEccCccCC----CCCCccccccCCCCeEEcccccCccc----cCCCC--ccCC
Q 039595 326 YLNQLN--G---VIPPSIGNLSSLRNLSLFNNGLY----GSIPEEIGYLKSLSELKLCKNNLSGV----IPHSV--GNLT 390 (1078)
Q Consensus 326 ~~N~l~--~---~~p~~l~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~--~~l~ 390 (1078)
++|+++ + ..|..+..+++|+.|+|++|.++ +.+|..+..+++|++|+|++|++++. ++..+ +.++
T Consensus 195 ~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~ 274 (386)
T 2ca6_A 195 VQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENI 274 (386)
T ss_dssp CSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSC
T ss_pred cCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCC
Confidence 999998 3 45558899999999999999996 57888899999999999999999876 45556 3489
Q ss_pred CCceeecccCcCCC----CCCccc-cccCCCCeEEccCccccccch--h-hccCCCCCcEecCCC
Q 039595 391 GLVLLNMCENHLFG----PIPKSL-KSLTSLKRVRFNQNNLVGKVY--E-AFGDHPNLTFLDLSQ 447 (1078)
Q Consensus 391 ~L~~L~L~~N~l~~----~~~~~l-~~l~~L~~L~L~~N~l~~~~~--~-~~~~l~~L~~L~Ls~ 447 (1078)
+|+.|++++|.+++ .+|..+ .++++|++|++++|.+++... . ....+++++.+++..
T Consensus 275 ~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~~~~~l~~~l~~~~~~~l~~ 339 (386)
T 2ca6_A 275 GLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDVVDEIREVFSTRGRGELDE 339 (386)
T ss_dssp CCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSHHHHHHHHHHHHHTCCEECC
T ss_pred CeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchhHHHHHHHHhhhcCcchhhh
Confidence 99999999999988 477777 668999999999999987762 2 223344555455543
No 346
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=2.3e-22 Score=223.95 Aligned_cols=128 Identities=28% Similarity=0.400 Sum_probs=62.2
Q ss_pred cCccceeEEEccCccCCCCCCcccccccccceeecccccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCe
Q 039595 147 GKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLST 226 (1078)
Q Consensus 147 ~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 226 (1078)
..+++|++|++++|.++ .+| .+..+++|++|++++|.+.+..+ ++++++|++|+|++|.+++. ..+..+++|++
T Consensus 38 ~~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~ 111 (308)
T 1h6u_A 38 ADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKT 111 (308)
T ss_dssp HHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCE
T ss_pred HHcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCE
Confidence 34555555555555554 233 34444444444444444443222 55555555555555555432 23455555555
Q ss_pred eecCCcccCCCCCCcccCCCCCcEEeccccccCCCCCcccCCCcccceeecccccccC
Q 039595 227 LDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLDLIENQLSG 284 (1078)
Q Consensus 227 L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 284 (1078)
|+|++|++++. | .+..+++|++|++++|++++..+ ++.+++|++|+|++|++++
T Consensus 112 L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~ 165 (308)
T 1h6u_A 112 LDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSD 165 (308)
T ss_dssp EECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred EECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCC
Confidence 55555555543 2 14555555555555555553322 4445555555555555543
No 347
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.87 E-value=1.1e-22 Score=242.91 Aligned_cols=188 Identities=23% Similarity=0.277 Sum_probs=107.0
Q ss_pred CcEEeccCCcccccCCCCCCCCCCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeeccc
Q 039595 104 LVNLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCH 183 (1078)
Q Consensus 104 L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~ 183 (1078)
|+.|+|++|++.+ +|..+. ++|++|+|++|+|+ .+| +.+++|++|+|++|++++ +|. ++. +|++|+|++
T Consensus 61 L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~ 129 (571)
T 3cvr_A 61 FSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDN 129 (571)
T ss_dssp CSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCS
T ss_pred ccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCC
Confidence 4445555555544 444442 55666666666555 344 335556666666666654 555 443 566666666
Q ss_pred ccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCCCC
Q 039595 184 NNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIP 263 (1078)
Q Consensus 184 n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p 263 (1078)
|.+++ +|. .+++|+.|+|++|++++ +|. .+++|++|+|++|+|++ +|. |. ++|+.|+|++|+|+ .+|
T Consensus 130 N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp 196 (571)
T 3cvr_A 130 NQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLP 196 (571)
T ss_dssp SCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCC
T ss_pred CcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chh
Confidence 66654 444 45666666666666654 443 35566666666666665 344 44 66666666666666 444
Q ss_pred cccCCCccc-------ceeecccccccCccccccccccCCceeeecccCCCCCCCccccCCCc
Q 039595 264 SIIGNLKSL-------HQLDLIENQLSGSIPLSFGNLSSWTLMSLFSNSLSGSIPPILGNLKS 319 (1078)
Q Consensus 264 ~~~~~l~~L-------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~ 319 (1078)
. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|.+++.+|..++.++.
T Consensus 197 ~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 197 A-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp C-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred h-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 4 443 55 66666666666 35555556666666666666666666666655443
No 348
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=5.1e-22 Score=221.14 Aligned_cols=192 Identities=26% Similarity=0.363 Sum_probs=109.2
Q ss_pred CCCCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeecccccccCCccCcccCCCCCcEE
Q 039595 124 NLSKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALL 203 (1078)
Q Consensus 124 ~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L 203 (1078)
++++|++|++++|.++. +| .+..+++|++|+|++|.+++ +|. ++.+++|++|++++|.+.+. ..++++++|++|
T Consensus 39 ~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L 112 (308)
T 1h6u_A 39 DLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELSGNPLKNV--SAIAGLQSIKTL 112 (308)
T ss_dssp HHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEE
T ss_pred HcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCC-Chh-HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEE
Confidence 44555555555555542 33 35555555555555555553 233 55555555555555555532 246666677777
Q ss_pred EccCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCCCCcccCCCcccceeeccccccc
Q 039595 204 YLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLDLIENQLS 283 (1078)
Q Consensus 204 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 283 (1078)
+|++|++++. | .+..+++|++|+|++|++++..+ +..+++|++|+|++|++++..+ +.++++|+.|+|++|+++
T Consensus 113 ~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~ 186 (308)
T 1h6u_A 113 DLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKIS 186 (308)
T ss_dssp ECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred ECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccC
Confidence 7777776653 2 26667777777777777765533 6667777777777777764332 667777777777777776
Q ss_pred CccccccccccCCceeeecccCCCCCCCccccCCCccCeeeccccccC
Q 039595 284 GSIPLSFGNLSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLN 331 (1078)
Q Consensus 284 ~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~ 331 (1078)
+..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|+++
T Consensus 187 ~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 187 DISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp CCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEE
T ss_pred cChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeee
Confidence 4433 4444444444444444443321 444455555555555544
No 349
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=6.9e-22 Score=224.50 Aligned_cols=180 Identities=19% Similarity=0.180 Sum_probs=84.0
Q ss_pred CcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCc-ccccccccce-eecccccccCCccCcccCCCCCcEEE
Q 039595 127 KLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPP-VIGQLSLIHE-FSFCHNNVSGRIPSSLGNLSKLALLY 204 (1078)
Q Consensus 127 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~-~i~~l~~L~~-L~l~~n~~~~~~p~~l~~l~~L~~L~ 204 (1078)
++++|+|++|+|+...+.+|.++++|++|+|++|++.+.+|. .|..++++++ +.+..|++.+..|..|.++++|++|+
T Consensus 31 ~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~ 110 (350)
T 4ay9_X 31 NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLL 110 (350)
T ss_dssp TCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEE
T ss_pred CCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhcccccccc
Confidence 445555555555432223445555555555555554444432 2344444333 23333444444445555555555555
Q ss_pred ccCCCCCCCCCCcccccCCCCeeecCC-cccCCCCCCcccCCC-CCcEEeccccccCCCCCcccCCCcccceeeccc-cc
Q 039595 205 LNNNSLFGYIPTVMGNLKSLSTLDLSQ-NQLNGLIPCTLDNLS-NLDTLFLYKNSLSGSIPSIIGNLKSLHQLDLIE-NQ 281 (1078)
Q Consensus 205 L~~n~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~-N~ 281 (1078)
+++|++++..+..+....++..|++.+ |+++...+..|..+. .++.|+|++|+|+. +|.......+|+.|++++ |.
T Consensus 111 l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~-i~~~~f~~~~L~~l~l~~~n~ 189 (350)
T 4ay9_X 111 ISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE-IHNSAFNGTQLDELNLSDNNN 189 (350)
T ss_dssp EEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE-ECTTSSTTEEEEEEECTTCTT
T ss_pred ccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC-CChhhccccchhHHhhccCCc
Confidence 555555544444444455555555543 344444444444443 35555555555553 333333344555555543 33
Q ss_pred ccCccccccccccCCceeeecccCCC
Q 039595 282 LSGSIPLSFGNLSSWTLMSLFSNSLS 307 (1078)
Q Consensus 282 l~~~~p~~~~~l~~L~~L~l~~n~l~ 307 (1078)
++...+..|..+++|+.|++++|+|+
T Consensus 190 l~~i~~~~f~~l~~L~~LdLs~N~l~ 215 (350)
T 4ay9_X 190 LEELPNDVFHGASGPVILDISRTRIH 215 (350)
T ss_dssp CCCCCTTTTTTEECCSEEECTTSCCC
T ss_pred ccCCCHHHhccCcccchhhcCCCCcC
Confidence 43322233444444444444444444
No 350
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=4e-21 Score=218.21 Aligned_cols=100 Identities=17% Similarity=0.160 Sum_probs=40.7
Q ss_pred cCeeeccccccCccCCCCCCCCCcCcEEEccC-ccCCCCCCccccccCCCCeEEcccccCccccCCCCccCCCCceeecc
Q 039595 320 LSTLGLYLNQLNGVIPPSIGNLSSLRNLSLFN-NGLYGSIPEEIGYLKSLSELKLCKNNLSGVIPHSVGNLTGLVLLNMC 398 (1078)
Q Consensus 320 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 398 (1078)
++.|+|++|+|+.+.+..| ...+|+.|++++ |.++...++.|..+++|++|+|++|+|+.+.+..+.++++|+.++
T Consensus 156 l~~L~L~~N~i~~i~~~~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~-- 232 (350)
T 4ay9_X 156 SVILWLNKNGIQEIHNSAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARS-- 232 (350)
T ss_dssp CEEEECCSSCCCEECTTSS-TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTT--
T ss_pred hhhhccccccccCCChhhc-cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhcc--
Confidence 4444444444443222222 233444555442 333322223344455555555555555443333333333222222
Q ss_pred cCcCCCCCCccccccCCCCeEEccCc
Q 039595 399 ENHLFGPIPKSLKSLTSLKRVRFNQN 424 (1078)
Q Consensus 399 ~N~l~~~~~~~l~~l~~L~~L~L~~N 424 (1078)
+.--..+| .+..+++|+.+++.++
T Consensus 233 -~~~l~~lP-~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 233 -TYNLKKLP-TLEKLVALMEASLTYP 256 (350)
T ss_dssp -CTTCCCCC-CTTTCCSCCEEECSCH
T ss_pred -CCCcCcCC-CchhCcChhhCcCCCC
Confidence 22112233 2445555555555443
No 351
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=8.4e-21 Score=198.53 Aligned_cols=172 Identities=24% Similarity=0.284 Sum_probs=134.9
Q ss_pred ceeEEEccCccCCCCCCcccccccccceeecccccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeeecC
Q 039595 151 QLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLS 230 (1078)
Q Consensus 151 ~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 230 (1078)
+|++|+|++|++++..+..++.+++|++|++++|++++..+..|+++++|++|+|++|++++..+..|.++++|++|+|+
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 108 (208)
T 2o6s_A 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALN 108 (208)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcC
Confidence 44444444444443333334455555555555555554445567889999999999999998877889999999999999
Q ss_pred CcccCCCCCCcccCCCCCcEEeccccccCCCCCcccCCCcccceeecccccccCccccccccccCCceeeecccCCCCCC
Q 039595 231 QNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLDLIENQLSGSIPLSFGNLSSWTLMSLFSNSLSGSI 310 (1078)
Q Consensus 231 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~ 310 (1078)
+|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|.+.+ .+++|+.|+++.|+++|.+
T Consensus 109 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~i 181 (208)
T 2o6s_A 109 TNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVV 181 (208)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTB
T ss_pred CCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCcee
Confidence 999999888889999999999999999998777789999999999999998875 4568999999999999999
Q ss_pred CccccCCCccCeeeccccccCcc
Q 039595 311 PPILGNLKSLSTLGLYLNQLNGV 333 (1078)
Q Consensus 311 p~~l~~l~~L~~L~L~~N~l~~~ 333 (1078)
|..++.++. ++..+...+.
T Consensus 182 p~~~~~l~~----~~~~C~~~~~ 200 (208)
T 2o6s_A 182 RNSAGSVAP----DSAKCSGSGK 200 (208)
T ss_dssp BCTTSSBCT----TCSBBTTTCC
T ss_pred eccCccccC----CccccccCCC
Confidence 999998776 3444444433
No 352
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.85 E-value=7.5e-22 Score=216.04 Aligned_cols=156 Identities=17% Similarity=0.114 Sum_probs=122.6
Q ss_pred HHHHhhcCCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCC-----h---------hhHHHHHHHHHHHhcCCC
Q 039595 745 EIIKATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGN-----M---------ADQDEFLNVVLALNEIRH 810 (1078)
Q Consensus 745 ~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~-----~---------~~~~~~~~e~~~l~~l~h 810 (1078)
........|++.+.||+|+||.||+|...+|+.||||+++....... . .....+.+|+.++++++
T Consensus 84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~- 162 (282)
T 1zar_A 84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ- 162 (282)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-
Confidence 34445567778899999999999999877899999999864321110 0 13567889999999999
Q ss_pred CceeeEEeeeecCCeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeee
Q 039595 811 RNIVKFHGFCSNARHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLL 890 (1078)
Q Consensus 811 ~niv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll 890 (1078)
| +++.+++.. +..|+||||++||+|.+ +.. .+...++.|++.||+|||+. ||+||||||+||++
T Consensus 163 -~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl 226 (282)
T 1zar_A 163 -G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLV 226 (282)
T ss_dssp -T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEE
T ss_pred -C-CCcCeEEec-cceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEE
Confidence 4 566665543 55699999999999988 521 23457999999999999999 99999999999999
Q ss_pred CCCCcEEEecccccccccCCCCCceeecccccccccccccc
Q 039595 891 DLEFEAHVSDFGIAKFVEPYSSNRTEFVGTFGYAAPEIAYT 931 (1078)
Q Consensus 891 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~ 931 (1078)
+ ++.+||+|||+|+. +..|+|||++..
T Consensus 227 ~-~~~vkl~DFG~a~~-------------~~~~~a~e~l~r 253 (282)
T 1zar_A 227 S-EEGIWIIDFPQSVE-------------VGEEGWREILER 253 (282)
T ss_dssp E-TTEEEECCCTTCEE-------------TTSTTHHHHHHH
T ss_pred E-CCcEEEEECCCCeE-------------CCCCCHHHHHHH
Confidence 9 99999999999973 335789998753
No 353
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.85 E-value=3.5e-21 Score=229.81 Aligned_cols=211 Identities=25% Similarity=0.337 Sum_probs=177.7
Q ss_pred ccCCCCCCCCCCCCCCCC-----cccce-EeeCCCCeEEEeccCccccCCcccCCccCCCCCCcEEeccCCcccccCCCC
Q 039595 48 LLSSWTLYPTNASKISPC-----SWFGI-SCNHAGSRVISINLSTLCLNGTFQDFSFSSFPHLVNLNLSFNLFFGNIPPQ 121 (1078)
Q Consensus 48 ~l~sW~~~~~~~~~~~~c-----~w~gv-~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~ 121 (1078)
.+.+|.. ..++| .|.|+ .|.. .+++.|+|+++.+.+ ++... +++|++|+|++|.++ .+|
T Consensus 32 ~l~~W~~------~~~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~~l---~~~L~~L~Ls~N~l~-~ip-- 96 (571)
T 3cvr_A 32 AWDKWEK------QALPGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPDNL---PPQITVLEITQNALI-SLP-- 96 (571)
T ss_dssp HHHHHHT------TCCTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCSCC---CTTCSEEECCSSCCS-CCC--
T ss_pred HHHHHhc------cCCccccccchhhhcccccc--CCccEEEeCCCCCCc-cCHhH---cCCCCEEECcCCCCc-ccc--
Confidence 4567852 35678 79999 7864 378889999998887 65432 388999999999998 677
Q ss_pred CCCCCCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeecccccccCCccCcccCCCCCc
Q 039595 122 IGNLSKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLA 201 (1078)
Q Consensus 122 ~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~ 201 (1078)
+.+++|++|+|++|+|++ +|. +.+ +|++|+|++|++++ +|. .+++|++|++++|.+++ +|. .+++|+
T Consensus 97 -~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~ 163 (571)
T 3cvr_A 97 -ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLE 163 (571)
T ss_dssp -CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCC
T ss_pred -cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcC
Confidence 568999999999999997 777 766 99999999999996 887 68999999999999996 776 678999
Q ss_pred EEEccCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCC-------cEEeccccccCCCCCcccCCCcccce
Q 039595 202 LLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNL-------DTLFLYKNSLSGSIPSIIGNLKSLHQ 274 (1078)
Q Consensus 202 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L-------~~L~L~~N~l~~~~p~~~~~l~~L~~ 274 (1078)
+|+|++|++++ +|. |. ++|+.|+|++|+|+ .+|. |.. +| +.|+|++|+|+ .+|..+.++++|+.
T Consensus 164 ~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~ 234 (571)
T 3cvr_A 164 VLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCT 234 (571)
T ss_dssp EEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEE
T ss_pred EEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCE
Confidence 99999999987 676 76 99999999999999 4566 664 77 99999999999 57888888999999
Q ss_pred eecccccccCccccccccccC
Q 039595 275 LDLIENQLSGSIPLSFGNLSS 295 (1078)
Q Consensus 275 L~Ls~N~l~~~~p~~~~~l~~ 295 (1078)
|+|++|++++.+|..+..+..
T Consensus 235 L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 235 IILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp EECCSSSCCHHHHHHHHHHHH
T ss_pred EEeeCCcCCCcCHHHHHHhhc
Confidence 999999999999998887654
No 354
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.83 E-value=5.3e-22 Score=246.01 Aligned_cols=268 Identities=18% Similarity=0.140 Sum_probs=96.4
Q ss_pred CCHHHHHHHHHHHHhcCCCCCCccccCCCCCCCCCCCCCCCCcccceEeeCCCCeEEEeccCccccCCcccCCccCCCCC
Q 039595 24 DSSAEACALLNWKTSLQNQNLNSSLLSSWTLYPTNASKISPCSWFGISCNHAGSRVISINLSTLCLNGTFQDFSFSSFPH 103 (1078)
Q Consensus 24 ~~~~~~~all~~k~~~~~~~~~~~~l~sW~~~~~~~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~ 103 (1078)
....+++||+++..+..... ...-++|.. ..+.++.|.|++++. .+|++++|..+.+... ....
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~-----~~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~~-------~~~~ 192 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSK--TAKKQQPTG-----DSTPSGTATNSAVST--PLTPKIELFANGKDEA-------NQAL 192 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHH--TTC-------------------------------------------------------
T ss_pred ccccchhhhhhhhhhccccc--CcccCCCcC-----CCCccccCCCceecC--CccceEEeeCCCCCcc-------hhhH
Confidence 44678899999998874321 112234531 234567899999864 5788888876655442 1234
Q ss_pred CcEEeccCCcccccCCCCCCCCCCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeeccc
Q 039595 104 LVNLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCH 183 (1078)
Q Consensus 104 L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~ 183 (1078)
|+.++|+.|.+.+ ++++.|.+. ..|..+..++.|+.|+|++|.+. .+|..++.+++|++|+|++
T Consensus 193 l~~l~Ls~~~i~~--------------~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~ 256 (727)
T 4b8c_D 193 LQHKKLSQYSIDE--------------DDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNG 256 (727)
T ss_dssp --------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTT
T ss_pred hhcCccCcccccC--------------cccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeC
Confidence 5556666665543 233344443 34455555566666666666655 5555555566666666666
Q ss_pred ccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCCCC
Q 039595 184 NNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIP 263 (1078)
Q Consensus 184 n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p 263 (1078)
|.++ .+|..|++|++|++|+|++|+|+ .+|..|++|++|++|+|++|.|+ .+|..|++|++|++|+|++|.|++.+|
T Consensus 257 N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p 333 (727)
T 4b8c_D 257 NSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFL 333 (727)
T ss_dssp SCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHH
T ss_pred CcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCCh
Confidence 6655 55556666666666666666665 45555666666666666666665 345556666666666666666665555
Q ss_pred cccCCCcc-cceeecccccccCccccccccccCCceeeeccc--------CCCCCCCccccCCCccCeeeccccccCc
Q 039595 264 SIIGNLKS-LHQLDLIENQLSGSIPLSFGNLSSWTLMSLFSN--------SLSGSIPPILGNLKSLSTLGLYLNQLNG 332 (1078)
Q Consensus 264 ~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n--------~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 332 (1078)
..+..+.. +..|+|++|.++|.+|..+ ..|+++.| .+.+..+..+.++..+....+++|-+.+
T Consensus 334 ~~~~~~~~~~~~l~l~~N~l~~~~p~~l------~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~~ 405 (727)
T 4b8c_D 334 KILTEKSVTGLIFYLRDNRPEIPLPHER------RFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLCQ 405 (727)
T ss_dssp HHHHHHHHHHHHHHHHHCCCCCCCCCC-----------------------------------------------CCCG
T ss_pred HHHhhcchhhhHHhhccCcccCcCcccc------ceeEeecccccccccCCccccccchhhcccccceeeeecccccc
Confidence 55544321 2235566666666555433 33334433 3444445556677777778888887754
No 355
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.83 E-value=7.6e-23 Score=245.72 Aligned_cols=224 Identities=20% Similarity=0.193 Sum_probs=109.1
Q ss_pred cccceEeeCCCCeEEEeccCccccCCcccCCccCCCCCCcEEeccCCc-------ccccCCC---CCCCCCCcceeccCC
Q 039595 66 SWFGISCNHAGSRVISINLSTLCLNGTFQDFSFSSFPHLVNLNLSFNL-------FFGNIPP---QIGNLSKLQNLDLGN 135 (1078)
Q Consensus 66 ~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~l~~L~~L~L~~n~-------~~~~~p~---~~~~l~~L~~L~Ls~ 135 (1078)
.|.++.|+....+|..+++....+.-... .+-..+.+.+.. ..+..+. .+..++.|+.|+|++
T Consensus 286 ~W~~~~~~~~~~~vw~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~L~~L~Ls~ 358 (567)
T 1dce_A 286 EWRTPDGRNRPSHVWLCDLPAASLNDQLP-------QHTFRVIWTGSDSQKECVLLKDRPECWCRDSATDEQLFRCELSV 358 (567)
T ss_dssp CCBCTTSSCCSEEEEEEECCGGGTSTTSS-------EEEEEEEETTTTEEEEEEEETTCSEEEEECCSTTTTSSSCCCCH
T ss_pred eeccCCcccccceeEEeecCccccccccc-------cceEEEeeccCCCCccccccCCCchhhhcccccCccceeccCCh
Confidence 58888888777888888887544321100 000000000000 0000000 123445555555555
Q ss_pred CccCCCCCccccCccceeEEEccCcc-------------CCCCCCcccccccccceee-cccc-------------cccC
Q 039595 136 NQLSGVISPEIGKLNQLRRLYLDMNQ-------------LHGTIPPVIGQLSLIHEFS-FCHN-------------NVSG 188 (1078)
Q Consensus 136 n~l~~~~p~~~~~l~~L~~L~L~~n~-------------l~~~~p~~i~~l~~L~~L~-l~~n-------------~~~~ 188 (1078)
|+++ .+|.+|++|++|+.|++++|. +.+.+|..++.+++|+.|+ ++.| .+.+
T Consensus 359 n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~L~~l~l~~n~i~~ 437 (567)
T 1dce_A 359 EKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRSKFLLENSVLK 437 (567)
T ss_dssp HHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred hhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccchhhhhhhhcccccc
Confidence 5554 455555555555555554443 3445555555555555555 3333 3332
Q ss_pred CccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCCCCcccCC
Q 039595 189 RIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGN 268 (1078)
Q Consensus 189 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~ 268 (1078)
..+ ..|+.|+|++|++++ +|. |+++++|+.|+|++|+|+ .+|..|+++++|+.|+|++|+|++ +| .+++
T Consensus 438 l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~ 506 (567)
T 1dce_A 438 MEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVAN 506 (567)
T ss_dssp HHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTT
T ss_pred cCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCC
Confidence 111 135555555555554 343 555555555555555555 345555555555555555555554 34 4555
Q ss_pred CcccceeecccccccCcc-ccccccccCCceeeecccCCCC
Q 039595 269 LKSLHQLDLIENQLSGSI-PLSFGNLSSWTLMSLFSNSLSG 308 (1078)
Q Consensus 269 l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~l~~n~l~~ 308 (1078)
+++|+.|+|++|+|++.. |..|+.+++|+.|+|++|.+++
T Consensus 507 l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~ 547 (567)
T 1dce_A 507 LPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ 547 (567)
T ss_dssp CSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGG
T ss_pred CCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCC
Confidence 555555555555555443 4444444444444444444443
No 356
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.81 E-value=3.2e-20 Score=224.19 Aligned_cols=189 Identities=25% Similarity=0.375 Sum_probs=99.6
Q ss_pred CCcEEeccCCcccccCCCCCCCCCCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeecc
Q 039595 103 HLVNLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFC 182 (1078)
Q Consensus 103 ~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~ 182 (1078)
.+..++|+.+.+.+.++ +..|++|+.|+|++|.++. +| .++.+++|++|+|++|++++..| ++.+++|++|+|+
T Consensus 22 ~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls 95 (605)
T 1m9s_A 22 ETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLD 95 (605)
T ss_dssp HHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECC
T ss_pred HHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECc
Confidence 34445555555554333 4556666666666666653 33 46666666666666666664332 5555555555555
Q ss_pred cccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCCC
Q 039595 183 HNNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSI 262 (1078)
Q Consensus 183 ~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 262 (1078)
+|.+.+ + ..++.+++|+.|+|++|.+++. ..+..+++|+.|+|++|++++. ..+..+++|+.|+|++|++++..
T Consensus 96 ~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~ 169 (605)
T 1m9s_A 96 ENKIKD-L-SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIV 169 (605)
T ss_dssp SSCCCC-C-TTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCG
T ss_pred CCCCCC-C-hhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCch
Confidence 555553 2 2455555555555555555542 2355555555555555555543 34555555555555555555443
Q ss_pred CcccCCCcccceeecccccccCccccccccccCCceeeecccCCC
Q 039595 263 PSIIGNLKSLHQLDLIENQLSGSIPLSFGNLSSWTLMSLFSNSLS 307 (1078)
Q Consensus 263 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~ 307 (1078)
| +..+++|+.|+|++|+|++. ..+..+++|+.|+|++|.+.
T Consensus 170 ~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 170 P--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECL 210 (605)
T ss_dssp G--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEE
T ss_pred h--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCc
Confidence 3 55555555555555555432 12333333444444333333
No 357
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.81 E-value=2.5e-19 Score=190.05 Aligned_cols=135 Identities=27% Similarity=0.346 Sum_probs=76.4
Q ss_pred CCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeecccccccCCccCcccCCCCCcEEEc
Q 039595 126 SKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLYL 205 (1078)
Q Consensus 126 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L 205 (1078)
++|++|+|++|++++..|..|+.+++|++|+|++|++++..+..++.+++|++|+|++|.+++..+..|..+++|++|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 34444444444444444444444444444444444443222233344455555555555555444445566666666666
Q ss_pred cCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCC
Q 039595 206 NNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGS 261 (1078)
Q Consensus 206 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 261 (1078)
++|+++ .+|..+.++++|++|+|++|++++..+..|..+++|+.|+|++|.+...
T Consensus 120 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 120 CCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp CSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred cCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCC
Confidence 666666 5566666677777777777777766556666777777777777776643
No 358
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=1.1e-19 Score=200.36 Aligned_cols=172 Identities=28% Similarity=0.452 Sum_probs=105.4
Q ss_pred CCCCCCcEEeccCCcccccCCCCCCCCCCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccce
Q 039595 99 SSFPHLVNLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHE 178 (1078)
Q Consensus 99 ~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~ 178 (1078)
..+++|++|++++|.+.+. | .++.+++|++|+|++|++++..+ ++++++|++|+|++|++++ +| .++.+++|++
T Consensus 43 ~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~ 116 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKS 116 (291)
T ss_dssp HHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCE
T ss_pred hhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCE
Confidence 4456667777777766543 3 36666777777777777765333 6667777777777776663 33 3666666666
Q ss_pred eecccccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEecccccc
Q 039595 179 FSFCHNNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSL 258 (1078)
Q Consensus 179 L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l 258 (1078)
|++++|.+++. ..++.+++|+.|+|++|++++. ..++.+++|++|+|++|++++..| +..+++|++|+|++|++
T Consensus 117 L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i 190 (291)
T 1h6t_A 117 LSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHI 190 (291)
T ss_dssp EECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcC
Confidence 66666666642 3466666666666666666543 455666666666666666665433 66666666666666666
Q ss_pred CCCCCcccCCCcccceeecccccccC
Q 039595 259 SGSIPSIIGNLKSLHQLDLIENQLSG 284 (1078)
Q Consensus 259 ~~~~p~~~~~l~~L~~L~Ls~N~l~~ 284 (1078)
++ +| .+..+++|+.|++++|+++.
T Consensus 191 ~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 191 SD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred CC-Ch-hhccCCCCCEEECcCCcccC
Confidence 63 23 25666666666666666653
No 359
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=1.2e-19 Score=219.28 Aligned_cols=195 Identities=23% Similarity=0.390 Sum_probs=149.0
Q ss_pred CCCCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeecccccccCCccCcccCCCCCcEE
Q 039595 124 NLSKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALL 203 (1078)
Q Consensus 124 ~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L 203 (1078)
.+..+..++|+.+.+...+ .+..|++|+.|+|++|.+. .+| .++.+++|++|+|++|.+++..| ++++++|+.|
T Consensus 19 ~l~~l~~l~l~~~~i~~~~--~~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L 92 (605)
T 1m9s_A 19 AFAETIKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWL 92 (605)
T ss_dssp HHHHHHHHHTTCSCTTSEE--CHHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEE
T ss_pred HHHHHHHHhccCCCccccc--chhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEE
Confidence 3556777888888887543 3678888999999999887 444 57888888888888888886554 8888888888
Q ss_pred EccCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCCCCcccCCCcccceeeccccccc
Q 039595 204 YLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLDLIENQLS 283 (1078)
Q Consensus 204 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 283 (1078)
+|++|.+++ +| .+..+++|+.|+|++|++++. ..+..+++|+.|+|++|++++. ..++.+++|+.|+|++|+++
T Consensus 93 ~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~ 166 (605)
T 1m9s_A 93 FLDENKIKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQIS 166 (605)
T ss_dssp ECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCC
T ss_pred ECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCC
Confidence 888888875 33 678888888888888888864 3577888888888888888854 56778888888888888888
Q ss_pred CccccccccccCCceeeecccCCCCCCCccccCCCccCeeeccccccCccC
Q 039595 284 GSIPLSFGNLSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLNGVI 334 (1078)
Q Consensus 284 ~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 334 (1078)
+..| +..+++|+.|+|++|.+++. ..+..+++|+.|+|++|++.+..
T Consensus 167 ~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p 213 (605)
T 1m9s_A 167 DIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKP 213 (605)
T ss_dssp CCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCC
T ss_pred Cchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCc
Confidence 7666 77777777777777777753 34677777777777777776543
No 360
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.80 E-value=1.2e-19 Score=191.32 Aligned_cols=157 Identities=20% Similarity=0.222 Sum_probs=134.0
Q ss_pred cEEeccCCccCCCcccccccCccCcEEeccCCccCCCcc-cccccccccceeeccCccccCCCCcccccccccccccccC
Q 039595 489 QFLDLSSNHIVGKIPVQLEKLFSLNKLILSLNQLSGSVP-LEFGSLTELQYLDLSANKLSSSIPKSIGNLLKLYYLNLSN 567 (1078)
Q Consensus 489 ~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 567 (1078)
+.+++++|.++. +|..+. ..++.|+|++|+|++..+ ..|..+++|++|+|++|.|++..+..|.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 478888888874 455443 356788999998886644 4588899999999999999888778899999999999999
Q ss_pred cccccccchhhhcccccCeeecCCCccCCcCCCCcccccccceeeccCccccCCcccccccCCcCcEEEcccCcCCCCCC
Q 039595 568 NQFSHTIPIEFEKLIHLSKLDLSHNILQEEIPPQVCNMESLEKLNLSHNNLSGFIPRCFEKMRSLSCIDICYNELQGPIP 647 (1078)
Q Consensus 568 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~l~l~~N~l~~~~~ 647 (1078)
|+|++..+..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|++..|..|..+++|+.|++++|+|++..+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 99988888889999999999999999998888889999999999999999998889999999999999999999998766
Q ss_pred C
Q 039595 648 N 648 (1078)
Q Consensus 648 ~ 648 (1078)
.
T Consensus 171 l 171 (220)
T 2v70_A 171 L 171 (220)
T ss_dssp G
T ss_pred h
Confidence 3
No 361
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=9.4e-20 Score=200.93 Aligned_cols=188 Identities=23% Similarity=0.397 Sum_probs=84.5
Q ss_pred cceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeecccccccCCccCcccCCCCCcEEEccC
Q 039595 128 LQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLYLNN 207 (1078)
Q Consensus 128 L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~ 207 (1078)
+..+.+..+.+++. ..+..+++|++|++++|.++ .+| .++.+++|++|++++|.+++..| ++++++|++|+|++
T Consensus 26 ~~~~~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~-~~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~ 99 (291)
T 1h6t_A 26 TIKDNLKKKSVTDA--VTQNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDE 99 (291)
T ss_dssp HHHHHTTCSCTTSE--ECHHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred HHHHHhcCCCcccc--cchhhcCcccEEEccCCCcc-cCh-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCC
Confidence 33444444444432 12334555555555555554 222 24444444444444444443322 45555555555555
Q ss_pred CCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCCCCcccCCCcccceeecccccccCccc
Q 039595 208 NSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLDLIENQLSGSIP 287 (1078)
Q Consensus 208 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 287 (1078)
|.+++ +| .+..+++|++|+|++|++++. ..+..+++|++|++++|++++. ..++.+++|++|+|++|++++..|
T Consensus 100 n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~ 173 (291)
T 1h6t_A 100 NKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 173 (291)
T ss_dssp SCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG
T ss_pred CcCCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh
Confidence 55543 22 245555555555555555542 2344455555555555555432 334445555555555555543322
Q ss_pred cccccccCCceeeecccCCCCCCCccccCCCccCeeeccccccC
Q 039595 288 LSFGNLSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLN 331 (1078)
Q Consensus 288 ~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~ 331 (1078)
+..+++|+.|++++|.+++. + .+..+++|+.|++++|+++
T Consensus 174 --l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 174 --LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp --GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEE
T ss_pred --hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCccc
Confidence 33333444444444433321 1 1344444444444444443
No 362
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=1.3e-19 Score=190.82 Aligned_cols=155 Identities=23% Similarity=0.303 Sum_probs=117.2
Q ss_pred cEEeccCCccCCCcccccccCccCcEEeccCCccCCCcccccccccccceeeccCccccCCCCcccccccccccccccCc
Q 039595 489 QFLDLSSNHIVGKIPVQLEKLFSLNKLILSLNQLSGSVPLEFGSLTELQYLDLSANKLSSSIPKSIGNLLKLYYLNLSNN 568 (1078)
Q Consensus 489 ~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 568 (1078)
+.+++++|.++ .+|..+. ++|+.|+|++|+|++..+..|..+++|++|+|++|.|++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 46677777776 3444443 56777777777777666667777778888888888887777777888888888888888
Q ss_pred ccccccchhhhcccccCeeecCCCccCCcCCCCcccccccceeeccCccccCCcccccccCCcCcEEEcccCcCCCCC
Q 039595 569 QFSHTIPIEFEKLIHLSKLDLSHNILQEEIPPQVCNMESLEKLNLSHNNLSGFIPRCFEKMRSLSCIDICYNELQGPI 646 (1078)
Q Consensus 569 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~l~l~~N~l~~~~ 646 (1078)
+|+...+..|.++++|+.|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|++++|+|.+..
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 168 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDC 168 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCC
Confidence 887666666777888888888888887777777778888888888888888777777888888888888888887644
No 363
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=6.3e-19 Score=185.69 Aligned_cols=153 Identities=25% Similarity=0.317 Sum_probs=85.6
Q ss_pred cEEeccCCcccccCCCCCCCCCCcceeccCCCccCCCCC-ccccCccceeEEEccCccCCCCCCcccccccccceeeccc
Q 039595 105 VNLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLSGVIS-PEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCH 183 (1078)
Q Consensus 105 ~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p-~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~ 183 (1078)
+.+++++|.++ .+|..+. ..+++|+|++|++++..| ..|+.+++|++|+|++|+++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~-------------------- 70 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKIT-------------------- 70 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCC--------------------
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCC--------------------
Confidence 35666666664 3454443 234566666666554433 22455555555555555554
Q ss_pred ccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCCCC
Q 039595 184 NNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIP 263 (1078)
Q Consensus 184 n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p 263 (1078)
+..|..|+++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|
T Consensus 71 ----~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 146 (220)
T 2v70_A 71 ----DIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAP 146 (220)
T ss_dssp ----EECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCT
T ss_pred ----EECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECH
Confidence 3334455555555555555555555555555556666666666666665555556666666666666666665555
Q ss_pred cccCCCcccceeecccccccC
Q 039595 264 SIIGNLKSLHQLDLIENQLSG 284 (1078)
Q Consensus 264 ~~~~~l~~L~~L~Ls~N~l~~ 284 (1078)
..|..+++|+.|+|++|.+.+
T Consensus 147 ~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 147 GAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp TTTTTCTTCCEEECCSCCEEC
T ss_pred HHhcCCCCCCEEEecCcCCcC
Confidence 566666666666666666554
No 364
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.78 E-value=8.4e-19 Score=184.69 Aligned_cols=152 Identities=23% Similarity=0.316 Sum_probs=84.1
Q ss_pred cEEeccCCcccccCCCCCCCCCCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeecccc
Q 039595 105 VNLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHN 184 (1078)
Q Consensus 105 ~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n 184 (1078)
+.+++++++++ .+|..+. ++|++|+|++|++++..+..|..+++|++|+|++|+++
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~--------------------- 69 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQIS--------------------- 69 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCC---------------------
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCC---------------------
Confidence 34666666654 3454433 45555666665555444445555555555555555554
Q ss_pred cccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCCCCc
Q 039595 185 NVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPS 264 (1078)
Q Consensus 185 ~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~ 264 (1078)
+..|..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..+.
T Consensus 70 ---~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 146 (220)
T 2v9t_B 70 ---ELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKG 146 (220)
T ss_dssp ---EECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred ---CcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHH
Confidence 33444555555555555555555544444455555566666666655555555555556666666666666555555
Q ss_pred ccCCCcccceeeccccccc
Q 039595 265 IIGNLKSLHQLDLIENQLS 283 (1078)
Q Consensus 265 ~~~~l~~L~~L~Ls~N~l~ 283 (1078)
.|..+++|+.|+|++|.+.
T Consensus 147 ~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 147 TFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp TTTTCTTCCEEECCSSCEE
T ss_pred HHhCCCCCCEEEeCCCCcC
Confidence 5555666666666666554
No 365
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.78 E-value=1.2e-21 Score=235.33 Aligned_cols=205 Identities=20% Similarity=0.172 Sum_probs=160.1
Q ss_pred ccCccceeEEEccCccCCCCCCcccccccccceeeccccc-------------ccCCccCcccCCCCCcEEE-ccCCCCC
Q 039595 146 IGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNN-------------VSGRIPSSLGNLSKLALLY-LNNNSLF 211 (1078)
Q Consensus 146 ~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~-------------~~~~~p~~l~~l~~L~~L~-L~~n~l~ 211 (1078)
+..+++|+.|+|++|+++ .+|++|+.|++|++|++++|. +.+.+|..++++++|+.|+ ++.|.+
T Consensus 345 ~~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~- 422 (567)
T 1dce_A 345 SATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL- 422 (567)
T ss_dssp CSTTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH-
T ss_pred cccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc-
Confidence 367899999999999998 899999999999999997775 5667777777777777777 555543
Q ss_pred CCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCCCCcccCCCcccceeecccccccCccccccc
Q 039595 212 GYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLDLIENQLSGSIPLSFG 291 (1078)
Q Consensus 212 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 291 (1078)
.+|+.+.+++|.++...+ ..|+.|+|++|+|++ +|. |+++++|+.|+|++|+|+ .+|..|+
T Consensus 423 ----------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~ 483 (567)
T 1dce_A 423 ----------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALA 483 (567)
T ss_dssp ----------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGG
T ss_pred ----------chhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhh
Confidence 345556666666664322 247888888888885 565 888888888888888888 6777888
Q ss_pred cccCCceeeecccCCCCCCCccccCCCccCeeeccccccCccC-CCCCCCCCcCcEEEccCccCCCCCCcc---ccccCC
Q 039595 292 NLSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLNGVI-PPSIGNLSSLRNLSLFNNGLYGSIPEE---IGYLKS 367 (1078)
Q Consensus 292 ~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~-p~~l~~l~~L~~L~Ls~N~l~~~~p~~---~~~l~~ 367 (1078)
.+++|+.|+|++|.+++ +| .++++++|++|+|++|+|++.. |..++.+++|+.|+|++|.+++.+|.. +..+++
T Consensus 484 ~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~ 561 (567)
T 1dce_A 484 ALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPS 561 (567)
T ss_dssp GCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTT
T ss_pred cCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcc
Confidence 88888888888888886 55 7888888888888888888776 888888888888888888888655432 334788
Q ss_pred CCeEEc
Q 039595 368 LSELKL 373 (1078)
Q Consensus 368 L~~L~L 373 (1078)
|+.|++
T Consensus 562 L~~L~l 567 (567)
T 1dce_A 562 VSSILT 567 (567)
T ss_dssp CSEEEC
T ss_pred cCccCC
Confidence 888864
No 366
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.78 E-value=7.2e-19 Score=186.54 Aligned_cols=156 Identities=26% Similarity=0.323 Sum_probs=124.4
Q ss_pred ccEEeccCCccCCCcccccccCccCcEEeccCCccCCCcccccccccccceeeccCccccCCCCcccccccccccccccC
Q 039595 488 LQFLDLSSNHIVGKIPVQLEKLFSLNKLILSLNQLSGSVPLEFGSLTELQYLDLSANKLSSSIPKSIGNLLKLYYLNLSN 567 (1078)
Q Consensus 488 L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 567 (1078)
.+.++.+++.++ .+|..+. ++|+.|+|++|+|++..|..|..+++|++|+|++|.|+...+..|..+++|++|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 456777787777 4444333 6788888888888877788888888888888888888766667778888888888888
Q ss_pred cccccccchhhhcccccCeeecCCCccCCcCCCCcccccccceeeccCccccCCcccccccCCcCcEEEcccCcCCCCCC
Q 039595 568 NQFSHTIPIEFEKLIHLSKLDLSHNILQEEIPPQVCNMESLEKLNLSHNNLSGFIPRCFEKMRSLSCIDICYNELQGPIP 647 (1078)
Q Consensus 568 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~l~l~~N~l~~~~~ 647 (1078)
|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..|..+++|+.|++++|++++..+
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 8888777777888888888888888887 567777888888888888888887777778888888888888888887665
No 367
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.77 E-value=5e-19 Score=201.76 Aligned_cols=175 Identities=24% Similarity=0.217 Sum_probs=97.1
Q ss_pred cEEeccCCcccccCCCCCCCCCCcceeccCCCccCCCCCcccc-CccceeEEEccCccCCCCCCcccccccccceeeccc
Q 039595 105 VNLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLSGVISPEIG-KLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCH 183 (1078)
Q Consensus 105 ~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~-~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~ 183 (1078)
+.+++++|++. .+|..+. +.+++|+|++|+|++..+..+. ++++|++|+|++|++++..|..|+.+++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 46778888776 3565554 3577777777777765555565 777777777777777644445555555555555555
Q ss_pred ccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcc---cCCCCCcEEeccccccCC
Q 039595 184 NNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTL---DNLSNLDTLFLYKNSLSG 260 (1078)
Q Consensus 184 n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~l~~L~~L~L~~N~l~~ 260 (1078)
|++++..+..|.++++|++|+|++|++++..|..|.++++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 55554444455555555555555555555445555555555555555555554333333 334455555555555543
Q ss_pred CCCcccCCCcc--cceeecccccc
Q 039595 261 SIPSIIGNLKS--LHQLDLIENQL 282 (1078)
Q Consensus 261 ~~p~~~~~l~~--L~~L~Ls~N~l 282 (1078)
..+..+..+++ |+.|+|++|.+
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~ 201 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPL 201 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCE
T ss_pred cCHHHhhhccHhhcceEEecCCCc
Confidence 33334444443 24444444444
No 368
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.77 E-value=6.5e-19 Score=200.80 Aligned_cols=154 Identities=22% Similarity=0.262 Sum_probs=81.0
Q ss_pred ceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccc-cccccceeecccccccCCccCcccCCCCCcEEEccC
Q 039595 129 QNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIG-QLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLYLNN 207 (1078)
Q Consensus 129 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~-~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~ 207 (1078)
+++++++++++ .+|..+. ..+++|+|++|++++..+..+. .+++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 46667777666 3555443 2356666666666644444444 555555555555555544444555555555555555
Q ss_pred CCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCCCCccc---CCCcccceeecccccccC
Q 039595 208 NSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSII---GNLKSLHQLDLIENQLSG 284 (1078)
Q Consensus 208 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l~~ 284 (1078)
|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|+|++..+..| ..+++|+.|+|++|+|++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 55554444445555555555555555555445555555555555555555553333333 334455555555555443
Q ss_pred c
Q 039595 285 S 285 (1078)
Q Consensus 285 ~ 285 (1078)
.
T Consensus 178 l 178 (361)
T 2xot_A 178 L 178 (361)
T ss_dssp C
T ss_pred c
Confidence 3
No 369
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.76 E-value=2.6e-19 Score=221.88 Aligned_cols=224 Identities=22% Similarity=0.203 Sum_probs=130.3
Q ss_pred CCCcEEeccCCcccccCCCCCCCCCCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeec
Q 039595 102 PHLVNLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSF 181 (1078)
Q Consensus 102 ~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l 181 (1078)
+.++.|+|.+|.+... | ...|+.++|+.|.|.+ ++++.|.+. ..|..+..++.|++|+|
T Consensus 173 ~~~~~l~L~~n~~~~~-~-----~~~l~~l~Ls~~~i~~--------------~~~~~n~~~-~~~~~~~~l~~L~~L~L 231 (727)
T 4b8c_D 173 PLTPKIELFANGKDEA-N-----QALLQHKKLSQYSIDE--------------DDDIENRMV-MPKDSKYDDQLWHALDL 231 (727)
T ss_dssp ----------------------------------------------------------------------CCCCCCEEEC
T ss_pred CccceEEeeCCCCCcc-h-----hhHhhcCccCcccccC--------------cccccccee-cChhhhccCCCCcEEEC
Confidence 4577788877777642 2 2346667777776653 345567766 67888999999999999
Q ss_pred ccccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCC
Q 039595 182 CHNNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGS 261 (1078)
Q Consensus 182 ~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 261 (1078)
++|.+. .+|..+.++++|++|+|++|.|+ .+|..|++|++|++|+|++|+|+ .+|..|++|++|++|+|++|.|+ .
T Consensus 232 s~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~ 307 (727)
T 4b8c_D 232 SNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-T 307 (727)
T ss_dssp TTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-C
T ss_pred CCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-c
Confidence 999998 78988999999999999999998 88999999999999999999999 67999999999999999999998 7
Q ss_pred CCcccCCCcccceeecccccccCccccccccccC-CceeeecccCCCCCCCccccCCCccCeeecccc--------ccCc
Q 039595 262 IPSIIGNLKSLHQLDLIENQLSGSIPLSFGNLSS-WTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLN--------QLNG 332 (1078)
Q Consensus 262 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N--------~l~~ 332 (1078)
+|..|+++++|++|+|++|.|++.+|..+..+.. +..++|++|.+++.+|.. |..|+++.| .+.+
T Consensus 308 lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~~~l~~ 381 (727)
T 4b8c_D 308 LPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEPQREYDSLQQ 381 (727)
T ss_dssp CCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------------------------
T ss_pred cChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecccccccccCCccc
Confidence 7888999999999999999999999998877643 335889999999998865 455666666 4555
Q ss_pred cCCCCCCCCCcCcEEEccCccCCC
Q 039595 333 VIPPSIGNLSSLRNLSLFNNGLYG 356 (1078)
Q Consensus 333 ~~p~~l~~l~~L~~L~Ls~N~l~~ 356 (1078)
..+..+..+..++...+++|-+.+
T Consensus 382 ~~~~~~~~l~~~~~~~ls~Nil~~ 405 (727)
T 4b8c_D 382 STEHLATDLAKRTFTVLSYNTLCQ 405 (727)
T ss_dssp --------------------CCCG
T ss_pred cccchhhcccccceeeeecccccc
Confidence 555666777778888888888764
No 370
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.75 E-value=8.1e-19 Score=190.24 Aligned_cols=146 Identities=26% Similarity=0.388 Sum_probs=59.3
Q ss_pred CCCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeecccccccCCccCcccCCCCCcEEE
Q 039595 125 LSKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLY 204 (1078)
Q Consensus 125 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~ 204 (1078)
+.++..+++++|.+++ ++ .+..+++|++|++++|.++ .+| .++.+++|++|++++|.+++..| ++++++|++|+
T Consensus 18 l~~l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 3344444444444442 22 3444444444444444444 233 33344444444444444443222 44444444444
Q ss_pred ccCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCCCCcccCCCcccceeeccccccc
Q 039595 205 LNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLDLIENQLS 283 (1078)
Q Consensus 205 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 283 (1078)
|++|++++. |. +.. ++|++|+|++|++++. + .+..+++|++|+|++|++++. + .++.+++|++|+|++|+++
T Consensus 92 L~~N~l~~l-~~-~~~-~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 92 VNRNRLKNL-NG-IPS-ACLSRLFLDNNELRDT-D-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp CCSSCCSCC-TT-CCC-SSCCEEECCSSCCSBS-G-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCC
T ss_pred CCCCccCCc-Cc-ccc-CcccEEEccCCccCCC-h-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCc
Confidence 444444432 21 111 4444444444444432 1 244444444444444444422 1 2344444444444444443
No 371
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.75 E-value=2e-18 Score=178.63 Aligned_cols=152 Identities=20% Similarity=0.267 Sum_probs=76.5
Q ss_pred CCCCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeecccccccCCccCcccCCCCCcEE
Q 039595 124 NLSKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALL 203 (1078)
Q Consensus 124 ~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L 203 (1078)
.+++|++|++++|+++ .+| .+..+++|++|++++|.++ .++.+..+++|++|++++|.+++..|..++.+++|++|
T Consensus 42 ~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L 117 (197)
T 4ezg_A 42 QMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLL 117 (197)
T ss_dssp HHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEE
T ss_pred hcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEE
Confidence 3444444444444444 233 3444444455555444332 22344445555555555555554445555555555555
Q ss_pred EccCCCCCCCCCCcccccCCCCeeecCCcc-cCCCCCCcccCCCCCcEEeccccccCCCCCcccCCCcccceeecccccc
Q 039595 204 YLNNNSLFGYIPTVMGNLKSLSTLDLSQNQ-LNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLDLIENQL 282 (1078)
Q Consensus 204 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 282 (1078)
+|++|++++..|..++.+++|++|+|++|+ ++. +| .+..+++|++|++++|++++ ++ .+..+++|++|++++|++
T Consensus 118 ~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~-~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 118 DISHSAHDDSILTKINTLPKVNSIDLSYNGAITD-IM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp ECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCC-CG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC--
T ss_pred EecCCccCcHhHHHHhhCCCCCEEEccCCCCccc-cH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCccc
Confidence 555555555445555555555555555555 332 23 45555566666666666553 22 455566666666666655
Q ss_pred c
Q 039595 283 S 283 (1078)
Q Consensus 283 ~ 283 (1078)
.
T Consensus 194 ~ 194 (197)
T 4ezg_A 194 G 194 (197)
T ss_dssp -
T ss_pred C
Confidence 4
No 372
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.74 E-value=1.1e-18 Score=189.18 Aligned_cols=170 Identities=22% Similarity=0.317 Sum_probs=91.6
Q ss_pred CccceeEEEccCccCCCCCCcccccccccceeecccccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCee
Q 039595 148 KLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTL 227 (1078)
Q Consensus 148 ~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 227 (1078)
.+.+++.++++.|.++ .++ .+..+++|++|++++|.++ .+| .++.+++|++|+|++|++++..| ++++++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~-~~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVT-DLV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTT-SEE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCcc-ccc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 4555666666666665 333 4555666666666666555 233 45556666666666666554333 5555666666
Q ss_pred ecCCcccCCCCCCcccCCCCCcEEeccccccCCCCCcccCCCcccceeecccccccCccccccccccCCceeeecccCCC
Q 039595 228 DLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLDLIENQLSGSIPLSFGNLSSWTLMSLFSNSLS 307 (1078)
Q Consensus 228 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~ 307 (1078)
+|++|++++. |. +.. ++|++|+|++|++++. + .++.+++|+.|+|++|++++. +
T Consensus 91 ~L~~N~l~~l-~~-~~~-~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~~-~-------------------- 144 (263)
T 1xeu_A 91 SVNRNRLKNL-NG-IPS-ACLSRLFLDNNELRDT-D-SLIHLKNLEILSIRNNKLKSI-V-------------------- 144 (263)
T ss_dssp ECCSSCCSCC-TT-CCC-SSCCEEECCSSCCSBS-G-GGTTCTTCCEEECTTSCCCBC-G--------------------
T ss_pred ECCCCccCCc-Cc-ccc-CcccEEEccCCccCCC-h-hhcCcccccEEECCCCcCCCC-h--------------------
Confidence 6666665543 22 222 5555555555555532 2 355555555555555555543 1
Q ss_pred CCCCccccCCCccCeeeccccccCccCCCCCCCCCcCcEEEccCccCCC
Q 039595 308 GSIPPILGNLKSLSTLGLYLNQLNGVIPPSIGNLSSLRNLSLFNNGLYG 356 (1078)
Q Consensus 308 ~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 356 (1078)
.++.+++|++|+|++|++++. ..+..+++|+.|++++|.+.+
T Consensus 145 -----~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 145 -----MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp -----GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEEC
T ss_pred -----HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccC
Confidence 344555555555555555543 445555555555555555553
No 373
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=3.2e-18 Score=177.12 Aligned_cols=153 Identities=16% Similarity=0.234 Sum_probs=82.5
Q ss_pred cCccceeEEEccCccCCCCCCcccccccccceeecccccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCe
Q 039595 147 GKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLST 226 (1078)
Q Consensus 147 ~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 226 (1078)
+.+++|++|++++|.++ .+| .+..+++|++|++++|.++ .+..++.+++|++|++++|++++..|..++.+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 45555555555555555 444 4555555555555555443 2235555555555555555555545555555555555
Q ss_pred eecCCcccCCCCCCcccCCCCCcEEeccccc-cCCCCCcccCCCcccceeecccccccCccccccccccCCceeeecccC
Q 039595 227 LDLSQNQLNGLIPCTLDNLSNLDTLFLYKNS-LSGSIPSIIGNLKSLHQLDLIENQLSGSIPLSFGNLSSWTLMSLFSNS 305 (1078)
Q Consensus 227 L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~ 305 (1078)
|+|++|++++..|..+..+++|++|+|++|+ ++ .+| .+..+++|++|++++|++++. + .+..+++|+.|++++|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC-
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCcc
Confidence 5555555555445555555555555555555 33 333 355555555555555555542 2 45555555555555555
Q ss_pred CC
Q 039595 306 LS 307 (1078)
Q Consensus 306 l~ 307 (1078)
+.
T Consensus 193 i~ 194 (197)
T 4ezg_A 193 IG 194 (197)
T ss_dssp --
T ss_pred cC
Confidence 43
No 374
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.73 E-value=1.5e-18 Score=195.16 Aligned_cols=218 Identities=11% Similarity=0.043 Sum_probs=139.3
Q ss_pred cCCCCeEEccCccccccchhhccCCCCCcEecCCCCccCCccCccccCCCCCceecccccc----cCCCCCccccCCCcc
Q 039595 413 LTSLKRVRFNQNNLVGKVYEAFGDHPNLTFLDLSQNNFDGKISFNWRNLPKLDTFIVSMNN----IFGSIPLEIGDSSKL 488 (1078)
Q Consensus 413 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~----i~~~~~~~~~~l~~L 488 (1078)
+++|+.|.+.+ .+..+...+|.++++|+.|++++|.+..+...+|.+..++..+....+. ........|.++..|
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 56666666655 5555666666666666666666666655555566555555544443321 122233344455555
Q ss_pred c-EEeccCCccCCCccccc----ccCccCcEEeccCCccCCCccccc-ccccccceeeccCccccCCCCccccccccccc
Q 039595 489 Q-FLDLSSNHIVGKIPVQL----EKLFSLNKLILSLNQLSGSVPLEF-GSLTELQYLDLSANKLSSSIPKSIGNLLKLYY 562 (1078)
Q Consensus 489 ~-~L~Ls~N~i~~~~~~~~----~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 562 (1078)
+ .+.+.... .++..+ ....++..+.+.++-.. .....+ ..+++|+.|+|++|.++.+.+.+|.++++|++
T Consensus 179 ~~~i~~~~~~---~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~ 254 (329)
T 3sb4_A 179 ETTIQVGAMG---KLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLK 254 (329)
T ss_dssp EEEEEECTTC---CHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCE
T ss_pred ceeEEecCCC---cHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCE
Confidence 5 44443321 122211 12345566666554221 111112 23678888888888888777778888888888
Q ss_pred ccccCcccccccchhhhcccccC-eeecCCCccCCcCCCCcccccccceeeccCccccCCcccccccCCcCcEEEc
Q 039595 563 LNLSNNQFSHTIPIEFEKLIHLS-KLDLSHNILQEEIPPQVCNMESLEKLNLSHNNLSGFIPRCFEKMRSLSCIDI 637 (1078)
Q Consensus 563 L~Ls~N~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~l~l 637 (1078)
|+|.+| ++.+.+.+|.++.+|+ .++|.+ .++...+..|.++++|+.|++++|+++.+.+..|.++++|+.++.
T Consensus 255 l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 255 IKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 888887 7777778888888888 888888 677666778888888888888888888888888888888888763
No 375
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.72 E-value=2.8e-18 Score=192.97 Aligned_cols=294 Identities=12% Similarity=0.084 Sum_probs=155.0
Q ss_pred CCCccccC--ccceeEEEccCccCCCCCCccccc-ccccceeeccccccc--CCccCcccCCCCCcEEEccCCCCCCCCC
Q 039595 141 VISPEIGK--LNQLRRLYLDMNQLHGTIPPVIGQ-LSLIHEFSFCHNNVS--GRIPSSLGNLSKLALLYLNNNSLFGYIP 215 (1078)
Q Consensus 141 ~~p~~~~~--l~~L~~L~L~~n~l~~~~p~~i~~-l~~L~~L~l~~n~~~--~~~p~~l~~l~~L~~L~L~~n~l~~~~p 215 (1078)
.++..++. +.+++.|.++++ +.+.--..+.. +++|++|+|++|++. ...+.. ++.++.+.+..|.+ .+
T Consensus 14 ~l~~~l~~~~~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~---~~~~~~~~~~~~~I---~~ 86 (329)
T 3sb4_A 14 TLISMMTEEEANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGT---YPNGKFYIYMANFV---PA 86 (329)
T ss_dssp CGGGGSCHHHHHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSS---SGGGCCEEECTTEE---CT
T ss_pred cHHhhccchhhCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCcccc---cccccccccccccc---CH
Confidence 33444433 667777777753 11111122333 556777777777665 211111 22234444444432 22
Q ss_pred Ccccc--------cCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCCCCcccCCCcccceeecccccc----c
Q 039595 216 TVMGN--------LKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLDLIENQL----S 283 (1078)
Q Consensus 216 ~~~~~--------l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l----~ 283 (1078)
.+|.+ +++|+.|+|.+ +++.+.+.+|.++++|++|++.+|.+..+.+.+|.++.++..+.++.+.. .
T Consensus 87 ~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~ 165 (329)
T 3sb4_A 87 YAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKN 165 (329)
T ss_dssp TTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTST
T ss_pred HHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccc
Confidence 44555 66666666666 66655555666666666666666666655555666665565555544221 1
Q ss_pred CccccccccccCCceeeecccCCCCCCCccccCCCccCeeeccccc-cCccCCCCCCCCCcCcEEEccCccCCCCCCccc
Q 039595 284 GSIPLSFGNLSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQ-LNGVIPPSIGNLSSLRNLSLFNNGLYGSIPEEI 362 (1078)
Q Consensus 284 ~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~-l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~ 362 (1078)
...+..|.++..|+. .+.+.... +.......--...+++.+.+.++-.. .....+
T Consensus 166 ~i~~~~f~~~~~L~~-----------------------~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l 221 (329)
T 3sb4_A 166 RWEHFAFIEGEPLET-----------------------TIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLI 221 (329)
T ss_dssp TTTTSCEEESCCCEE-----------------------EEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHH
T ss_pred cccccccccccccce-----------------------eEEecCCCcHHHHHhhcccCccccceEEEeeeecH-HHHHHH
Confidence 112223333333331 22221110 00000000112344555555544221 111111
Q ss_pred c-ccCCCCeEEcccccCccccCCCCccCCCCceeecccCcCCCCCCccccccCCCC-eEEccCccccccchhhccCCCCC
Q 039595 363 G-YLKSLSELKLCKNNLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLKSLTSLK-RVRFNQNNLVGKVYEAFGDHPNL 440 (1078)
Q Consensus 363 ~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L 440 (1078)
. .+++|+.|+|++|+++.+.+.+|.++++|+.+++.+| +....+.+|.++++|+ .+.+.+ .+..+...+|.++++|
T Consensus 222 ~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L 299 (329)
T 3sb4_A 222 RDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNL 299 (329)
T ss_dssp HHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTE
T ss_pred HHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccC
Confidence 1 2567777777777777666667777777777777766 5555666677777776 777766 6666666777777777
Q ss_pred cEecCCCCccCCccCccccCCCCCceec
Q 039595 441 TFLDLSQNNFDGKISFNWRNLPKLDTFI 468 (1078)
Q Consensus 441 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 468 (1078)
+.|++++|.++.+...+|.++++|+.++
T Consensus 300 ~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 300 RYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred CEEEeCCCccCccchhhhcCCcchhhhc
Confidence 7777777777666666666666666554
No 376
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.71 E-value=1e-17 Score=172.28 Aligned_cols=129 Identities=25% Similarity=0.330 Sum_probs=60.4
Q ss_pred cEEeccCCccCCCcccccccCccCcEEeccCCccCCCccc-ccccccccceeeccCccccCCCCcccccccccccccccC
Q 039595 489 QFLDLSSNHIVGKIPVQLEKLFSLNKLILSLNQLSGSVPL-EFGSLTELQYLDLSANKLSSSIPKSIGNLLKLYYLNLSN 567 (1078)
Q Consensus 489 ~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 567 (1078)
+.+++++|.++ .+|..+.. +|++|+|++|+|++..+. .|..+++|++|+|++|.|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 45556666554 33333322 455555555555433332 244445555555555555444444444444444444444
Q ss_pred cccccccchhhhcccccCeeecCCCccCCcCCCCcccccccceeeccCccccC
Q 039595 568 NQFSHTIPIEFEKLIHLSKLDLSHNILQEEIPPQVCNMESLEKLNLSHNNLSG 620 (1078)
Q Consensus 568 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 620 (1078)
|+|++..+..|.++++|+.|+|++|+|++..|..+..+++|++|+|++|++++
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 140 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNC 140 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCC
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccC
Confidence 44444444444444444444444444444444444444444444444444443
No 377
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.71 E-value=1.8e-17 Score=178.98 Aligned_cols=142 Identities=15% Similarity=0.113 Sum_probs=108.6
Q ss_pred cCCCccceeccCCceeEEEEEe-CCCCE--EEEEEeccccccCC--------------------hhhHHHHHHHHHHHhc
Q 039595 751 DDFDEKFCIGKGGQGSVYKAEL-PSGDI--VAVKKFNSQLLSGN--------------------MADQDEFLNVVLALNE 807 (1078)
Q Consensus 751 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~--vavK~~~~~~~~~~--------------------~~~~~~~~~e~~~l~~ 807 (1078)
.-|++.+.||+|+||.||+|.. .+|+. ||||+++....... ......+.+|+..+++
T Consensus 47 ~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 126 (258)
T 1zth_A 47 YITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLER 126 (258)
T ss_dssp SEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHH
T ss_pred CchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHH
Confidence 3467889999999999999977 67888 99999754321100 0112367889999999
Q ss_pred CCCCce--eeEEeeeecCCeeEEEEeecCC-C----CHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHH-hcCCCCcE
Q 039595 808 IRHRNI--VKFHGFCSNARHSFLVCEYLHR-G----SLARILGNDATAKELSWNRRINVIKGVANALSYLH-HDCLPSII 879 (1078)
Q Consensus 808 l~h~ni--v~l~~~~~~~~~~~lv~E~~~~-g----~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH-~~~~~~iv 879 (1078)
+.|+++ +..+++ ...++||||+.+ | +|.++... .++.++..++.|++.|+.||| +. ||+
T Consensus 127 l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~---giv 193 (258)
T 1zth_A 127 AKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQEA---ELV 193 (258)
T ss_dssp HHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHTS---CEE
T ss_pred HHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHHC---CEE
Confidence 988754 344443 357899999942 3 67766521 234567889999999999999 88 999
Q ss_pred ecCCCCCCeeeCCCCcEEEecccccccc
Q 039595 880 HRDISSKNVLLDLEFEAHVSDFGIAKFV 907 (1078)
Q Consensus 880 H~Dlk~~NIll~~~~~~kl~DfG~a~~~ 907 (1078)
||||||+|||++. .++|+|||+|...
T Consensus 194 HrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 194 HADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred eCCCCHHHEEEcC--cEEEEECcccccC
Confidence 9999999999988 9999999999754
No 378
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.67 E-value=1.6e-16 Score=163.35 Aligned_cols=92 Identities=29% Similarity=0.447 Sum_probs=48.3
Q ss_pred ccCCCCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCCCCcccCCCcccc
Q 039595 194 LGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLH 273 (1078)
Q Consensus 194 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 273 (1078)
|+++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++.+|..|..+++|+
T Consensus 50 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 129 (192)
T 1w8a_A 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLT 129 (192)
T ss_dssp GGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCC
T ss_pred cccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCC
Confidence 44455555555555555544455555555555555555555554444455555555555555555554455555555555
Q ss_pred eeecccccccCc
Q 039595 274 QLDLIENQLSGS 285 (1078)
Q Consensus 274 ~L~Ls~N~l~~~ 285 (1078)
+|+|++|.+++.
T Consensus 130 ~L~L~~N~l~c~ 141 (192)
T 1w8a_A 130 SLNLASNPFNCN 141 (192)
T ss_dssp EEECTTCCBCCS
T ss_pred EEEeCCCCccCc
Confidence 555555555443
No 379
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.66 E-value=2e-16 Score=158.94 Aligned_cols=108 Identities=21% Similarity=0.253 Sum_probs=43.2
Q ss_pred CCcceeccCCCccC-CCCCccccCccceeEEEccCccCCCCCCcccccccccceeecccccccCCccCcccCCCCCcEEE
Q 039595 126 SKLQNLDLGNNQLS-GVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLY 204 (1078)
Q Consensus 126 ~~L~~L~Ls~n~l~-~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~ 204 (1078)
++|++|+|++|+++ +.+|..+..+++|++|+|++|.+++. ..++.+++|++|++++|.+++.+|..+.++++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 34444444444444 34444444444444444444444422 3333333333333333333333333333344444444
Q ss_pred ccCCCCCCCCC-CcccccCCCCeeecCCcccC
Q 039595 205 LNNNSLFGYIP-TVMGNLKSLSTLDLSQNQLN 235 (1078)
Q Consensus 205 L~~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~ 235 (1078)
|++|.+++..+ ..+..+++|++|++++|+++
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~ 133 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVT 133 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGG
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCc
Confidence 44444432211 33333444444444444444
No 380
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.65 E-value=1.5e-15 Score=174.28 Aligned_cols=262 Identities=10% Similarity=0.062 Sum_probs=139.5
Q ss_pred CcCcEEEccCccCCCCCCccccccCCCCeEEcccccCccccCCCCccCCCCceeecccCcCCCCCCccccccCCCCeEEc
Q 039595 342 SSLRNLSLFNNGLYGSIPEEIGYLKSLSELKLCKNNLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLKSLTSLKRVRF 421 (1078)
Q Consensus 342 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L 421 (1078)
..++.+.+.+ .++......|.+. +|+.+.+..| ++.+...+|.+. +|+.+.+.+ .+....+.+|.++++|+.+++
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 4455555543 2333334445443 4666665544 444444555552 455555543 344344445555555555555
Q ss_pred cCccccccchhhccCCCCCcEecCCCCccCCccCccccCCCCCceecccccccCCCCCccccCCCcccEEeccCCccCCC
Q 039595 422 NQNNLVGKVYEAFGDHPNLTFLDLSQNNFDGKISFNWRNLPKLDTFIVSMNNIFGSIPLEIGDSSKLQFLDLSSNHIVGK 501 (1078)
Q Consensus 422 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~ 501 (1078)
.+|.+..+...+|. ..+|+.+.+..+ ++.+... .|.++++|+.+++..| ++.+
T Consensus 188 ~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~------------------------aF~~~~~L~~l~l~~~-l~~I 240 (401)
T 4fdw_A 188 SKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQ------------------------AFLKTSQLKTIEIPEN-VSTI 240 (401)
T ss_dssp TTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTT------------------------TTTTCTTCCCEECCTT-CCEE
T ss_pred CCCcceEechhhEe-ecccCEEEeCCc-hheehhh------------------------HhhCCCCCCEEecCCC-ccCc
Confidence 55555555555544 244555555422 4444444 4444455555555443 3334
Q ss_pred cccccccCccCcEEeccCCccCCCcccccccccccceeeccCcccc-----CCCCcccccccccccccccCcccccccch
Q 039595 502 IPVQLEKLFSLNKLILSLNQLSGSVPLEFGSLTELQYLDLSANKLS-----SSIPKSIGNLLKLYYLNLSNNQFSHTIPI 576 (1078)
Q Consensus 502 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 576 (1078)
...+|.+ .+|+.+.+ .|.++.+...+|.++++|+.+++.+|.+. .+.+.+|.++++|+.++|. |.++.+...
T Consensus 241 ~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~ 317 (401)
T 4fdw_A 241 GQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQG 317 (401)
T ss_dssp CTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTT
T ss_pred ccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhh
Confidence 4444444 45555555 33344444555555666666666555443 3445566666666666666 335555666
Q ss_pred hhhcccccCeeecCCCccCCcCCCCcccccccceeeccCccccCCcccccccCC-cCcEEEcccC
Q 039595 577 EFEKLIHLSKLDLSHNILQEEIPPQVCNMESLEKLNLSHNNLSGFIPRCFEKMR-SLSCIDICYN 640 (1078)
Q Consensus 577 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~-~L~~l~l~~N 640 (1078)
+|.++++|+.++|..| ++.....+|.++ +|+.+++++|.+....+..|..++ +++.|.+..|
T Consensus 318 aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~ 380 (401)
T 4fdw_A 318 LLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAE 380 (401)
T ss_dssp TTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGG
T ss_pred hhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHH
Confidence 6767777777777544 555555566666 677777777766666666666663 4566665544
No 381
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.65 E-value=3.7e-16 Score=157.06 Aligned_cols=133 Identities=26% Similarity=0.313 Sum_probs=106.2
Q ss_pred ccceeEEEccCccCC-CCCCcccccccccceeecccccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCee
Q 039595 149 LNQLRRLYLDMNQLH-GTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTL 227 (1078)
Q Consensus 149 l~~L~~L~L~~n~l~-~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 227 (1078)
.++|++|+|++|.++ +.+|..++.+++|++|++++|.+++. ..++.+++|++|+|++|++++.+|..+.++++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 367889999999887 78888888888888888888888765 778888888888888888887777777778888888
Q ss_pred ecCCcccCCCC-CCcccCCCCCcEEeccccccCCCCC---cccCCCcccceeeccccccc
Q 039595 228 DLSQNQLNGLI-PCTLDNLSNLDTLFLYKNSLSGSIP---SIIGNLKSLHQLDLIENQLS 283 (1078)
Q Consensus 228 ~L~~N~l~~~~-p~~l~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~ 283 (1078)
+|++|++++.. +..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 88888888642 2677788888888888888885544 36777888888888888776
No 382
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.63 E-value=2.4e-16 Score=154.88 Aligned_cols=128 Identities=21% Similarity=0.222 Sum_probs=83.3
Q ss_pred CCCCcEEeccCCccc-ccCCCCCCCCCCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCccccccccccee
Q 039595 101 FPHLVNLNLSFNLFF-GNIPPQIGNLSKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEF 179 (1078)
Q Consensus 101 l~~L~~L~L~~n~~~-~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L 179 (1078)
.++|++|++++|.+. +.+|..++.+++|++|+|++|.+++. ..++.+++|++|+|++|.+++.+|..++.+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 466777888888777 67777777777888888887777754 667777777777777777776566666666666666
Q ss_pred ecccccccCC-ccCcccCCCCCcEEEccCCCCCCCCC---CcccccCCCCeeecC
Q 039595 180 SFCHNNVSGR-IPSSLGNLSKLALLYLNNNSLFGYIP---TVMGNLKSLSTLDLS 230 (1078)
Q Consensus 180 ~l~~n~~~~~-~p~~l~~l~~L~~L~L~~n~l~~~~p---~~~~~l~~L~~L~L~ 230 (1078)
++++|.+++. .|..++++++|++|++++|.+++..+ ..++.+++|++|+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 6666666542 23555555555555555555554433 345555555555554
No 383
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.63 E-value=3.7e-15 Score=171.00 Aligned_cols=272 Identities=10% Similarity=0.060 Sum_probs=198.6
Q ss_pred CCCccCeeeccccccCccCCCCCCCCCcCcEEEccCccCCCCCCccccccCCCCeEEcccccCccccCCCCccCCCCcee
Q 039595 316 NLKSLSTLGLYLNQLNGVIPPSIGNLSSLRNLSLFNNGLYGSIPEEIGYLKSLSELKLCKNNLSGVIPHSVGNLTGLVLL 395 (1078)
Q Consensus 316 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 395 (1078)
.+..++.+.+.. .++.+...+|.++ +|+.+.+.+| ++......|.+. +|+.+.+.. .+..+.+.+|.++++|+.+
T Consensus 111 ~~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l 185 (401)
T 4fdw_A 111 ILKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKA 185 (401)
T ss_dssp ECSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEE
T ss_pred ecCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCee
Confidence 346777887764 5676777889886 7999999877 765666677774 799999996 7887888999999999999
Q ss_pred ecccCcCCCCCCccccccCCCCeEEccCccccccchhhccCCCCCcEecCCCCccCCccCccccCCCCCceecccccccC
Q 039595 396 NMCENHLFGPIPKSLKSLTSLKRVRFNQNNLVGKVYEAFGDHPNLTFLDLSQNNFDGKISFNWRNLPKLDTFIVSMNNIF 475 (1078)
Q Consensus 396 ~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~ 475 (1078)
++.+|.+......+|. ..+|+.+.+.. .+..+...+|..+++|+.+++..| ++.+...+|.+ .+|+.+.+ .+.++
T Consensus 186 ~l~~n~l~~I~~~aF~-~~~L~~l~lp~-~l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~ 260 (401)
T 4fdw_A 186 DLSKTKITKLPASTFV-YAGIEEVLLPV-TLKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVT 260 (401)
T ss_dssp ECTTSCCSEECTTTTT-TCCCSEEECCT-TCCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCC
T ss_pred ecCCCcceEechhhEe-ecccCEEEeCC-chheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCcc
Confidence 9999999887778887 58999999984 599999999999999999999875 66666666665 55555555 23344
Q ss_pred CCCCccccCCCcccEEeccCCccCCCcccccccCccCcEEeccCCccCCCcccccccccccceeeccCccccCCCCcccc
Q 039595 476 GSIPLEIGDSSKLQFLDLSSNHIVGKIPVQLEKLFSLNKLILSLNQLSGSVPLEFGSLTELQYLDLSANKLSSSIPKSIG 555 (1078)
Q Consensus 476 ~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 555 (1078)
......|.++++|+.+++.+|.+. .+.+..+.+..|.++++|+.++|. |.++.+...+|.
T Consensus 261 ~I~~~aF~~c~~L~~l~l~~~~~~-------------------~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~ 320 (401)
T 4fdw_A 261 NIASRAFYYCPELAEVTTYGSTFN-------------------DDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLG 320 (401)
T ss_dssp EECTTTTTTCTTCCEEEEESSCCC-------------------CCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTT
T ss_pred EEChhHhhCCCCCCEEEeCCcccc-------------------CCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhc
Confidence 444444445555555554444432 001113445667777777777777 346666667777
Q ss_pred cccccccccccCcccccccchhhhcccccCeeecCCCccCCcCCCCccccc-ccceeeccCcccc
Q 039595 556 NLLKLYYLNLSNNQFSHTIPIEFEKLIHLSKLDLSHNILQEEIPPQVCNME-SLEKLNLSHNNLS 619 (1078)
Q Consensus 556 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~ 619 (1078)
++++|+.++|..| ++.+...+|.++ +|+.+++++|.+.......|..++ +++.|++..|.+.
T Consensus 321 ~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 321 GNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp TCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred CCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 7788888888554 666677778888 888888888887766666777774 6788888777654
No 384
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.62 E-value=1.9e-15 Score=155.32 Aligned_cols=127 Identities=31% Similarity=0.394 Sum_probs=67.0
Q ss_pred ceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeecccccccCCccCcccCCCCCcEEEccCC
Q 039595 129 QNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLYLNNN 208 (1078)
Q Consensus 129 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n 208 (1078)
+++++++|+++ .+|..+. ++|++|+|++|+++ .+ |..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~i------------------------p~~~~~l~~L~~L~Ls~N 64 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LV------------------------PKELSNYKHLTLIDLSNN 64 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SC------------------------CGGGGGCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hh------------------------HHHhhcccCCCEEECCCC
Confidence 35566666655 4454432 34555555555554 33 444445555555555555
Q ss_pred CCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCCCCcccCCCcccceeeccccccc
Q 039595 209 SLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLDLIENQLS 283 (1078)
Q Consensus 209 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 283 (1078)
++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|.+.
T Consensus 65 ~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 65 RISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred cCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 555444445555555555555555555554555555555555555555555444444555555555555555554
No 385
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.62 E-value=3.3e-16 Score=153.94 Aligned_cols=127 Identities=25% Similarity=0.290 Sum_probs=59.9
Q ss_pred CCcceeccCCCccC-CCCCccccCccceeEEEccCccCCCCCCcccccccccceeecccccccCCccCcccCCCCCcEEE
Q 039595 126 SKLQNLDLGNNQLS-GVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLY 204 (1078)
Q Consensus 126 ~~L~~L~Ls~n~l~-~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~ 204 (1078)
++|++|++++|.++ +.+|..++.+++|++|++++|.++ +. ..++++++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~------------------------~~--~~~~~l~~L~~L~ 70 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLT------------------------SI--ANLPKLNKLKKLE 70 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCC------------------------CC--TTCCCCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCC------------------------Cc--hhhhcCCCCCEEE
Confidence 44455555555544 444444444444444444444444 22 3344444555555
Q ss_pred ccCCCCCCCCCCcccccCCCCeeecCCcccCCC-CCCcccCCCCCcEEeccccccCCCCC---cccCCCcccceeecc
Q 039595 205 LNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGL-IPCTLDNLSNLDTLFLYKNSLSGSIP---SIIGNLKSLHQLDLI 278 (1078)
Q Consensus 205 L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~l~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~Ls 278 (1078)
|++|.+++.+|..++++++|++|++++|++++. .|..+..+++|++|++++|.+++..+ ..+..+++|++|+++
T Consensus 71 Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 71 LSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 555555444444444455555555555555442 12444445555555555555543333 244445555555543
No 386
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.61 E-value=2.2e-15 Score=154.83 Aligned_cols=127 Identities=20% Similarity=0.262 Sum_probs=87.4
Q ss_pred cEEeccCCcccccCCCCCCCCCCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccccccceeecccc
Q 039595 105 VNLNLSFNLFFGNIPPQIGNLSKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHN 184 (1078)
Q Consensus 105 ~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n 184 (1078)
+.+++++|.+. .+|..+. ++|++|+|++|+++ .+|..|.++++|++|+|++|++++..|..|..+++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 57999999987 6777664 68999999999998 78899999999999999999998655555666655555555555
Q ss_pred cccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcccC
Q 039595 185 NVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLN 235 (1078)
Q Consensus 185 ~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 235 (1078)
.+++..|..|.++++|++|+|++|.+++..+..|..+++|+.|+|++|.+.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 555554445555555555555555555444444444555555555555444
No 387
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.61 E-value=1.1e-15 Score=154.89 Aligned_cols=132 Identities=27% Similarity=0.285 Sum_probs=79.8
Q ss_pred cEEeccCCccCCCcccccccccccceeeccCccccCCCCcccccccccccccccCcccccccchhhhcccccCeeecCCC
Q 039595 513 NKLILSLNQLSGSVPLEFGSLTELQYLDLSANKLSSSIPKSIGNLLKLYYLNLSNNQFSHTIPIEFEKLIHLSKLDLSHN 592 (1078)
Q Consensus 513 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 592 (1078)
+.+++++|+++. +|..+ .++|+.|+|++|.+++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 10 ~~l~~~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 345555555542 22222 145566666666665555555566666666666666666555555666666666666666
Q ss_pred ccCCcCCCCcccccccceeeccCccccCCcccccccCCcCcEEEcccCcCCCCCC
Q 039595 593 ILQEEIPPQVCNMESLEKLNLSHNNLSGFIPRCFEKMRSLSCIDICYNELQGPIP 647 (1078)
Q Consensus 593 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~l~l~~N~l~~~~~ 647 (1078)
+|++..+..+..+++|++|+|++|++++..+..|..+++|+.|++++|++++.+|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 6665555556666677777777777766555556667777777777777776554
No 388
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.61 E-value=4.2e-15 Score=150.68 Aligned_cols=112 Identities=25% Similarity=0.286 Sum_probs=60.9
Q ss_pred ccceeecccccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEecc
Q 039595 175 LIHEFSFCHNNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLY 254 (1078)
Q Consensus 175 ~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 254 (1078)
+|++|++++|.+.+..+..++++++|++|+|++|++++..+..|+++++|++|+|++|++++..+..|..+++|++|+|+
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 108 (177)
T 2o6r_A 29 SATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALD 108 (177)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECc
Confidence 34444444444443333444555555555555555555444455555666666666666655555455555666666666
Q ss_pred ccccCCCCCcccCCCcccceeecccccccCcc
Q 039595 255 KNSLSGSIPSIIGNLKSLHQLDLIENQLSGSI 286 (1078)
Q Consensus 255 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 286 (1078)
+|++++..+..+..+++|++|+|++|.+.+..
T Consensus 109 ~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 109 TNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp SSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred CCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 66665444444555666666666666555433
No 389
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.58 E-value=5.3e-16 Score=173.27 Aligned_cols=144 Identities=11% Similarity=0.087 Sum_probs=102.3
Q ss_pred HhhcCCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCC----------hhhHH--------HHHHHHHHHhcCC
Q 039595 748 KATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGN----------MADQD--------EFLNVVLALNEIR 809 (1078)
Q Consensus 748 ~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~----------~~~~~--------~~~~e~~~l~~l~ 809 (1078)
....-|++.++||+|+||.||+|...+|+.||||+++....... ..... ...+|...+.++.
T Consensus 92 ~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~ 171 (397)
T 4gyi_A 92 ARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALY 171 (397)
T ss_dssp HTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHH
Confidence 33445999999999999999999888999999999764321100 00011 1234555566654
Q ss_pred CCcee--eEEeeeecCCeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCC
Q 039595 810 HRNIV--KFHGFCSNARHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKN 887 (1078)
Q Consensus 810 h~niv--~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~N 887 (1078)
+.++. ..+++ ...++||||++|++|.++.. ......++.|++.++.|||++ |||||||||.|
T Consensus 172 ~~gv~vp~p~~~----~~~~LVME~i~G~~L~~l~~---------~~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~N 235 (397)
T 4gyi_A 172 EEGFPVPEPIAQ----SRHTIVMSLVDALPMRQVSS---------VPDPASLYADLIALILRLAKH---GLIHGDFNEFN 235 (397)
T ss_dssp HTTCSCCCEEEE----ETTEEEEECCSCEEGGGCCC---------CSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTS
T ss_pred hcCCCCCeeeec----cCceEEEEecCCccHhhhcc---------cHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHH
Confidence 44332 22221 23479999999988866541 123456889999999999999 99999999999
Q ss_pred eeeCCCC----------cEEEecccccccc
Q 039595 888 VLLDLEF----------EAHVSDFGIAKFV 907 (1078)
Q Consensus 888 Ill~~~~----------~~kl~DfG~a~~~ 907 (1078)
||++++| .+.|+||+-+...
T Consensus 236 ILl~~dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 236 ILIREEKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp EEEEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred EEEeCCCCcccccccccceEEEEeCCcccC
Confidence 9998876 3899999987643
No 390
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.57 E-value=2.9e-14 Score=164.37 Aligned_cols=330 Identities=13% Similarity=0.046 Sum_probs=159.6
Q ss_pred CCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCCCCcccCCCcccceeecccccccCccccccccc
Q 039595 214 IPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLDLIENQLSGSIPLSFGNL 293 (1078)
Q Consensus 214 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 293 (1078)
-..+|.++++|+.+.|.. .++.+...+|.++++|+.+++.++ ++.+-..+|.++.+|+.+.+..+ +......+|.++
T Consensus 63 g~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~ 139 (394)
T 4fs7_A 63 GYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGC 139 (394)
T ss_dssp CTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTC
T ss_pred HHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeecc
Confidence 335666777777777753 355555566777777777777544 44333455666666666655433 222223333333
Q ss_pred cCCceeeecccCCCCCCCccccCCCccCeeeccccccCccCCCCCCCCCcCcEEEccCccCCCCCCccccccCCCCeEEc
Q 039595 294 SSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLNGVIPPSIGNLSSLRNLSLFNNGLYGSIPEEIGYLKSLSELKL 373 (1078)
Q Consensus 294 ~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 373 (1078)
.. +...... .+......+|.++++|+.+.+.++... .....|..+.+|+.+.+
T Consensus 140 ~~------------------------~~~~~~~--~~~~i~~~aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l 192 (394)
T 4fs7_A 140 DF------------------------KEITIPE--GVTVIGDEAFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKL 192 (394)
T ss_dssp CC------------------------SEEECCT--TCCEECTTTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCC
T ss_pred cc------------------------cccccCc--cccccchhhhcccCCCcEEecCCccce-eccccccCCCCceEEEc
Confidence 22 2111111 111122345555666666666544322 33344555666666666
Q ss_pred ccccCccccCCCCccCCCCceeecccCcCCCCCCccccccCCCCeEEccCccccccchhhccCCCCCcEecCCCCccCCc
Q 039595 374 CKNNLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLKSLTSLKRVRFNQNNLVGKVYEAFGDHPNLTFLDLSQNNFDGK 453 (1078)
Q Consensus 374 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 453 (1078)
..| ++.+...+|.++..|+.+.+..+... +...+.....|+.+.+.. .+..+...+|.....++.+.+..+.. .+
T Consensus 193 ~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~-~~~~i~~~~f~~~~~l~~~~~~~~~~-~i 267 (394)
T 4fs7_A 193 PRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPD-SFTELGKSVFYGCTDLESISIQNNKL-RI 267 (394)
T ss_dssp CTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECT-TCCEECSSTTTTCSSCCEEEECCTTC-EE
T ss_pred CCC-ceEeCchhhccccccceeecCCCceE--eehhhcccCCCceEEECC-CceecccccccccccceeEEcCCCcc-ee
Confidence 554 44444555666666666655544321 122223334555555532 33444555555555666665554422 23
Q ss_pred cCccccCCCCCceecccccccCCCCCccccCCCcccEEeccCCccCCCcccccccCccCcEEeccCCccCCCcccccccc
Q 039595 454 ISFNWRNLPKLDTFIVSMNNIFGSIPLEIGDSSKLQFLDLSSNHIVGKIPVQLEKLFSLNKLILSLNQLSGSVPLEFGSL 533 (1078)
Q Consensus 454 ~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 533 (1078)
....|.....++.+ .+..+.+. ...|..+.+|+.+.+..+ ++.+...+|.++
T Consensus 268 ~~~~F~~~~~l~~~------------------------~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c 319 (394)
T 4fs7_A 268 GGSLFYNCSGLKKV------------------------IYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESC 319 (394)
T ss_dssp CSCTTTTCTTCCEE------------------------EECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTC
T ss_pred ecccccccccccee------------------------ccCceeec---cccccccccccccccccc-cceechhhhcCC
Confidence 33444444444444 33333221 223444444444444432 333334445555
Q ss_pred cccceeeccCccccCCCCcccccccccccccccCcccccccchhhhcccccCeeecCCCccCCcCCCCcccccccce
Q 039595 534 TELQYLDLSANKLSSSIPKSIGNLLKLYYLNLSNNQFSHTIPIEFEKLIHLSKLDLSHNILQEEIPPQVCNMESLEK 610 (1078)
Q Consensus 534 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 610 (1078)
.+|+.++|..+ ++.+...+|.++.+|+.+++..| ++.+...+|.++.+|+.+++..+ ++ .+...|.++++|+.
T Consensus 320 ~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~ 392 (394)
T 4fs7_A 320 TSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKW 392 (394)
T ss_dssp TTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEE
T ss_pred CCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcE
Confidence 55555555433 44344455555555555555544 44444555555556666655543 22 12234555555554
No 391
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.56 E-value=2.1e-17 Score=171.02 Aligned_cols=153 Identities=23% Similarity=0.341 Sum_probs=78.1
Q ss_pred CCCCCcEEeccCCcccccCCC------CCCCCCCcceeccCCCccCCCCCccccCccceeEEEccCccCCCCCCcccccc
Q 039595 100 SFPHLVNLNLSFNLFFGNIPP------QIGNLSKLQNLDLGNNQLSGVISPEIGKLNQLRRLYLDMNQLHGTIPPVIGQL 173 (1078)
Q Consensus 100 ~l~~L~~L~L~~n~~~~~~p~------~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l 173 (1078)
....++.++|+.+.+.|.+|. .++.+++|++|+|++|++++ +| .++++++|++|+|++|.++ .+|..++.+
T Consensus 16 ~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~ 92 (198)
T 1ds9_A 16 ERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVA 92 (198)
T ss_dssp HTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHH
T ss_pred hcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcC
Confidence 344555555666666655554 45555555555555555553 44 5555555555555555555 444444444
Q ss_pred cccceeecccccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcccCCCCC-CcccCCCCCcEEe
Q 039595 174 SLIHEFSFCHNNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIP-CTLDNLSNLDTLF 252 (1078)
Q Consensus 174 ~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~ 252 (1078)
++|++| +|++|++++ +| .++++++|++|+|++|++++..+ ..+..+++|++|+
T Consensus 93 ~~L~~L------------------------~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~ 146 (198)
T 1ds9_A 93 DTLEEL------------------------WISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLL 146 (198)
T ss_dssp HHCSEE------------------------EEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEE
T ss_pred CcCCEE------------------------ECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEE
Confidence 444444 444444443 22 34445555555555555553221 2445555555555
Q ss_pred ccccccCCCCCc----------ccCCCcccceeeccccccc
Q 039595 253 LYKNSLSGSIPS----------IIGNLKSLHQLDLIENQLS 283 (1078)
Q Consensus 253 L~~N~l~~~~p~----------~~~~l~~L~~L~Ls~N~l~ 283 (1078)
+++|.+++.+|. .+..+++|+.|| +|.++
T Consensus 147 l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 147 LAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp ECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred ecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 555555444333 255566666665 44444
No 392
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.56 E-value=9.6e-17 Score=166.07 Aligned_cols=153 Identities=22% Similarity=0.253 Sum_probs=119.1
Q ss_pred CCcccEEeccCCccCCCccc------ccccCccCcEEeccCCccCCCcccccccccccceeeccCccccCCCCccccccc
Q 039595 485 SSKLQFLDLSSNHIVGKIPV------QLEKLFSLNKLILSLNQLSGSVPLEFGSLTELQYLDLSANKLSSSIPKSIGNLL 558 (1078)
Q Consensus 485 l~~L~~L~Ls~N~i~~~~~~------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 558 (1078)
...++.++++.|.+.+..|. .+..+++|++|+|++|++++ +| .+..+++|++|+|++|.++ .+|..+..++
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~ 93 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVAD 93 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHH
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCC
Confidence 34455555555555555444 78888888888888888886 55 7888888999999999888 5677777788
Q ss_pred ccccccccCcccccccchhhhcccccCeeecCCCccCCcCC-CCcccccccceeeccCccccCCcccc----------cc
Q 039595 559 KLYYLNLSNNQFSHTIPIEFEKLIHLSKLDLSHNILQEEIP-PQVCNMESLEKLNLSHNNLSGFIPRC----------FE 627 (1078)
Q Consensus 559 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~----------l~ 627 (1078)
+|++|+|++|+|++ +| .+..+++|+.|+|++|++++..+ ..+..+++|++|++++|++++.+|.. +.
T Consensus 94 ~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~ 171 (198)
T 1ds9_A 94 TLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVK 171 (198)
T ss_dssp HCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHH
T ss_pred cCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHH
Confidence 89999999999875 44 68888999999999999875332 46778899999999999998776653 78
Q ss_pred cCCcCcEEEcccCcCCC
Q 039595 628 KMRSLSCIDICYNELQG 644 (1078)
Q Consensus 628 ~l~~L~~l~l~~N~l~~ 644 (1078)
.+++|+.|| +|+++.
T Consensus 172 ~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 172 RLPNLKKLD--GMPVDV 186 (198)
T ss_dssp HCSSCSEEC--CGGGTT
T ss_pred hCCCcEEEC--CcccCH
Confidence 899999887 777764
No 393
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.55 E-value=1.2e-13 Score=159.31 Aligned_cols=327 Identities=13% Similarity=0.063 Sum_probs=142.1
Q ss_pred cccCCCCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCCCCcccCCCccc
Q 039595 193 SLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSL 272 (1078)
Q Consensus 193 ~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 272 (1078)
.|.++++|+.+.|.. .++.+-..+|.++++|+.++|..+ ++.+....|.++++|+.+.+..+ +...-..+|.+...+
T Consensus 66 AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~~ 142 (394)
T 4fs7_A 66 AFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDFK 142 (394)
T ss_dssp TTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCCS
T ss_pred HhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeeccccc
Confidence 344444555555432 233233344555555555555433 33333344555555555444432 222223344444332
Q ss_pred ceeecccccccCccccccccccCCceeeecccCCCCCCCccccCCCccCeeeccccccCccCCCCCCCCCcCcEEEccCc
Q 039595 273 HQLDLIENQLSGSIPLSFGNLSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLNGVIPPSIGNLSSLRNLSLFNN 352 (1078)
Q Consensus 273 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N 352 (1078)
+....... ......+|.++.+|+.+.+.++. .......|.++.+|+.+.+..| ++.+....|.++..|+.+.+.++
T Consensus 143 ~~~~~~~~--~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~ 218 (394)
T 4fs7_A 143 EITIPEGV--TVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNS 218 (394)
T ss_dssp EEECCTTC--CEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTT
T ss_pred ccccCccc--cccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCC
Confidence 22222211 11223345555555555544332 2122344555555655555544 33344455555666665555544
Q ss_pred cCCCCCCccccccCCCCeEEcccccCccccCCCCccCCCCceeecccCcCCCCCCccccccCCCCeEEccCccccccchh
Q 039595 353 GLYGSIPEEIGYLKSLSELKLCKNNLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLKSLTSLKRVRFNQNNLVGKVYE 432 (1078)
Q Consensus 353 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~ 432 (1078)
... +.+......+|+.+.+..+ ++.+....|.++..|+.+.+..+.. ......|..+..++.+.+..+. +...
T Consensus 219 ~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~-~i~~~~F~~~~~l~~~~~~~~~---i~~~ 291 (394)
T 4fs7_A 219 LYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKL-RIGGSLFYNCSGLKKVIYGSVI---VPEK 291 (394)
T ss_dssp CCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTC-EECSCTTTTCTTCCEEEECSSE---ECTT
T ss_pred ceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcc-eeeccccccccccceeccCcee---eccc
Confidence 332 2222333345555555432 2223334455555555555544422 1233344444444444443322 2223
Q ss_pred hccCCCCCcEecCCCCccCCccCccccCCCCCceecccccccCCCCCccccCCCcccEEeccCCccCCCcccccccCccC
Q 039595 433 AFGDHPNLTFLDLSQNNFDGKISFNWRNLPKLDTFIVSMNNIFGSIPLEIGDSSKLQFLDLSSNHIVGKIPVQLEKLFSL 512 (1078)
Q Consensus 433 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L 512 (1078)
+|....+|+.+.+..+ ++.+.. ..|.++.+|+.++|.++ ++.+...+|.++.+|
T Consensus 292 ~F~~~~~L~~i~l~~~-i~~I~~------------------------~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L 345 (394)
T 4fs7_A 292 TFYGCSSLTEVKLLDS-VKFIGE------------------------EAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSL 345 (394)
T ss_dssp TTTTCTTCCEEEECTT-CCEECT------------------------TTTTTCTTCCEECCCTT-CCEECTTTTTTCTTC
T ss_pred cccccccccccccccc-cceech------------------------hhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCC
Confidence 3444444444444322 333333 33444444444444322 333344455555555
Q ss_pred cEEeccCCccCCCcccccccccccceeeccCccccCCCCccccccccccc
Q 039595 513 NKLILSLNQLSGSVPLEFGSLTELQYLDLSANKLSSSIPKSIGNLLKLYY 562 (1078)
Q Consensus 513 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 562 (1078)
+.+.+..| ++.+...+|.++.+|+.+++..+ ++ .+..+|.++++|+.
T Consensus 346 ~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~ 392 (394)
T 4fs7_A 346 SNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKW 392 (394)
T ss_dssp CEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEE
T ss_pred CEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcE
Confidence 55555444 44344455555555555555543 22 22334555555543
No 394
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.53 E-value=7.1e-15 Score=148.81 Aligned_cols=105 Identities=21% Similarity=0.236 Sum_probs=50.6
Q ss_pred ccceeeccCccccCCCCcccccccccccccccCcccccccchhhhcccccCeeecCCCccCCcCCC--Ccccccccceee
Q 039595 535 ELQYLDLSANKLSSSIPKSIGNLLKLYYLNLSNNQFSHTIPIEFEKLIHLSKLDLSHNILQEEIPP--QVCNMESLEKLN 612 (1078)
Q Consensus 535 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~--~~~~l~~L~~L~ 612 (1078)
+|++|+|++|.|++. ..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|+. +|. .+..+++|+.|+
T Consensus 43 ~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~ 119 (176)
T 1a9n_A 43 QFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVE-LGDLDPLASLKSLTYLC 119 (176)
T ss_dssp CCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCCC-GGGGGGGGGCTTCCEEE
T ss_pred CCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCCc-chhhHhhhcCCCCCEEE
Confidence 444444444444432 344444455555555555544333334455555555555555532 222 444555555555
Q ss_pred ccCccccCCccc----ccccCCcCcEEEcccCcCC
Q 039595 613 LSHNNLSGFIPR----CFEKMRSLSCIDICYNELQ 643 (1078)
Q Consensus 613 L~~N~l~~~~~~----~l~~l~~L~~l~l~~N~l~ 643 (1078)
+++|+++.. |. .+..+++|+.||+++|...
T Consensus 120 l~~N~i~~~-~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 120 ILRNPVTNK-KHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCSSGGGGS-TTHHHHHHHHCTTCSEETTEECCHH
T ss_pred ecCCCCCCc-HhHHHHHHHHCCccceeCCCcCCHH
Confidence 555555532 33 2555555555555555443
No 395
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.50 E-value=1.6e-14 Score=146.17 Aligned_cols=131 Identities=21% Similarity=0.256 Sum_probs=75.8
Q ss_pred cCccceeEEEccCccCCCCCCccccccc-ccceeecccccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCC
Q 039595 147 GKLNQLRRLYLDMNQLHGTIPPVIGQLS-LIHEFSFCHNNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLS 225 (1078)
Q Consensus 147 ~~l~~L~~L~L~~n~l~~~~p~~i~~l~-~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 225 (1078)
.++.+|++|++++|+++ .+|. +..+. +|++|++++|.+++. ..++.+++|++|+|++|++++..|..++.+++|+
T Consensus 16 ~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 91 (176)
T 1a9n_A 16 TNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 91 (176)
T ss_dssp ECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred CCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCC
Confidence 33444444444444444 2222 22222 444444444444432 4566667777777777777654444456677777
Q ss_pred eeecCCcccCCCCCC--cccCCCCCcEEeccccccCCCCCcc----cCCCcccceeeccccccc
Q 039595 226 TLDLSQNQLNGLIPC--TLDNLSNLDTLFLYKNSLSGSIPSI----IGNLKSLHQLDLIENQLS 283 (1078)
Q Consensus 226 ~L~L~~N~l~~~~p~--~l~~l~~L~~L~L~~N~l~~~~p~~----~~~l~~L~~L~Ls~N~l~ 283 (1078)
+|+|++|+++. +|. .+..+++|++|++++|.++ .+|.. +..+++|++||++.|.+.
T Consensus 92 ~L~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 92 ELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp EEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred EEECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 77777777754 343 5666777777777777776 34443 667777777777777664
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.46 E-value=8e-14 Score=139.98 Aligned_cols=108 Identities=27% Similarity=0.359 Sum_probs=58.7
Q ss_pred ceeeccCccccCCCCcccccccccccccccCcccccccchhhhcccccCeeecCCCccCCcCCCCcccccccceeeccCc
Q 039595 537 QYLDLSANKLSSSIPKSIGNLLKLYYLNLSNNQFSHTIPIEFEKLIHLSKLDLSHNILQEEIPPQVCNMESLEKLNLSHN 616 (1078)
Q Consensus 537 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 616 (1078)
+.+++++|.++. +|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|++|+|++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 444555555542 333332 44555555555555555555555555555555555555544444555556666666666
Q ss_pred cccCCcccccccCCcCcEEEcccCcCCCCCC
Q 039595 617 NLSGFIPRCFEKMRSLSCIDICYNELQGPIP 647 (1078)
Q Consensus 617 ~l~~~~~~~l~~l~~L~~l~l~~N~l~~~~~ 647 (1078)
+|++..+..|..+++|+.|+|++|+|++..+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 6655555555566666666666666655443
No 397
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.42 E-value=5.8e-13 Score=133.65 Aligned_cols=86 Identities=34% Similarity=0.446 Sum_probs=38.7
Q ss_pred CCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCCCCcccCCCcccceeec
Q 039595 198 SKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLDL 277 (1078)
Q Consensus 198 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 277 (1078)
++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 30 ~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 109 (170)
T 3g39_A 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWL 109 (170)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEe
Confidence 33444444444444444444444444444444444444443334444444444444444444433334444444444444
Q ss_pred cccccc
Q 039595 278 IENQLS 283 (1078)
Q Consensus 278 s~N~l~ 283 (1078)
++|+++
T Consensus 110 ~~N~~~ 115 (170)
T 3g39_A 110 LNNPWD 115 (170)
T ss_dssp CSSCBC
T ss_pred CCCCCC
Confidence 444444
No 398
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.40 E-value=9.7e-13 Score=132.48 Aligned_cols=86 Identities=30% Similarity=0.391 Sum_probs=42.1
Q ss_pred CCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCCCCcccCCCcccceeec
Q 039595 198 SKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLDL 277 (1078)
Q Consensus 198 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 277 (1078)
++|++|+|++|++++..|..|+++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L 112 (174)
T 2r9u_A 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYL 112 (174)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEe
Confidence 44444555555554444444445555555555555555443334444555555555555555433334555555555555
Q ss_pred cccccc
Q 039595 278 IENQLS 283 (1078)
Q Consensus 278 s~N~l~ 283 (1078)
++|.+.
T Consensus 113 ~~N~~~ 118 (174)
T 2r9u_A 113 YNNPWD 118 (174)
T ss_dssp CSSCBC
T ss_pred CCCCcc
Confidence 555544
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.40 E-value=1.2e-12 Score=131.90 Aligned_cols=104 Identities=26% Similarity=0.404 Sum_probs=68.1
Q ss_pred EEEccCccCCCCCCcccccccccceeecccccccCCccCcccCCCCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcc
Q 039595 154 RLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNLSKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQ 233 (1078)
Q Consensus 154 ~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~ 233 (1078)
.+++++|+++ .+|..+. ++|++|+|++|.+++..|..|+++++|++|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 16 ~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 16 LVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 4444444443 4444443 455555555555555556667777777777777777776555566777777777777777
Q ss_pred cCCCCCCcccCCCCCcEEeccccccCC
Q 039595 234 LNGLIPCTLDNLSNLDTLFLYKNSLSG 260 (1078)
Q Consensus 234 l~~~~p~~l~~l~~L~~L~L~~N~l~~ 260 (1078)
|++..+..|..+++|++|+|++|.+..
T Consensus 93 l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 93 LKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred cceeCHHHhccccCCCEEEeCCCCccc
Confidence 776655567777777777777777774
No 400
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.32 E-value=2.2e-11 Score=140.20 Aligned_cols=330 Identities=10% Similarity=0.115 Sum_probs=148.1
Q ss_pred CcccCCCc-ccceeecccccccCccccccccccCCceeeecccC---CCCCCCccccCCCccCeeeccccccCccCCCCC
Q 039595 263 PSIIGNLK-SLHQLDLIENQLSGSIPLSFGNLSSWTLMSLFSNS---LSGSIPPILGNLKSLSTLGLYLNQLNGVIPPSI 338 (1078)
Q Consensus 263 p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~---l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l 338 (1078)
..+|.+.. .|+.+.+..+ ++.+-..+|.++.+|+.+.+..|. ++..-...|.++.+|+.+.+..+ ++.+....|
T Consensus 56 ~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF 133 (394)
T 4gt6_A 56 DRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAF 133 (394)
T ss_dssp TTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTT
T ss_pred HhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhh
Confidence 45566653 4777777643 554555666666666666666553 33233345555555655555433 333444455
Q ss_pred CCCCcCcEEEccCccCCCCCCccccccCCCCeEEcccccCccccCCCCccCCCCceeecccCcCCCCCCccccccCCCCe
Q 039595 339 GNLSSLRNLSLFNNGLYGSIPEEIGYLKSLSELKLCKNNLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLKSLTSLKR 418 (1078)
Q Consensus 339 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~ 418 (1078)
..+.+|+.+.+..+ +.......|..+.+|+.+.+..+ ++.+...+|.+ .+|+.+.+..+
T Consensus 134 ~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~------------------ 192 (394)
T 4gt6_A 134 HHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAK------------------ 192 (394)
T ss_dssp TTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTT------------------
T ss_pred hhhcccccccccce-eeeecccceecccccccccccce-eeEeccccccc-cceeEEEECCc------------------
Confidence 55555555555433 22233334445555555555433 22233333322 33444443322
Q ss_pred EEccCccccccchhhccCCCCCcEecCCCCccCCccCccccCCCCCceecccccccCCCCCccccCCCcccEEeccCCcc
Q 039595 419 VRFNQNNLVGKVYEAFGDHPNLTFLDLSQNNFDGKISFNWRNLPKLDTFIVSMNNIFGSIPLEIGDSSKLQFLDLSSNHI 498 (1078)
Q Consensus 419 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i 498 (1078)
+..+...+|....+++......+.........+......... ...+.....+..+.+. +.+
T Consensus 193 -------~~~i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~ip-~~v 253 (394)
T 4gt6_A 193 -------VTRIGTNAFSECFALSTITSDSESYPAIDNVLYEKSANGDYA-----------LIRYPSQREDPAFKIP-NGV 253 (394)
T ss_dssp -------CCEECTTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSCEE-----------EEECCTTCCCSEEECC-TTE
T ss_pred -------ccccccchhhhccccceecccccccccccceeeccccccccc-----------ccccccccccceEEcC-Ccc
Confidence 222333444444444444433332221111111100000000 0001111122222222 122
Q ss_pred CCCcccccccCccCcEEeccCCccCCCcccccccccccceeeccCccccCCCCcccccccccccccccCcccccccchhh
Q 039595 499 VGKIPVQLEKLFSLNKLILSLNQLSGSVPLEFGSLTELQYLDLSANKLSSSIPKSIGNLLKLYYLNLSNNQFSHTIPIEF 578 (1078)
Q Consensus 499 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 578 (1078)
+.....+|.++..|+.+.+..+..+ +....|.++++|+.+.+. +.++.+...+|.++.+|+.++|..+ ++.+...+|
T Consensus 254 ~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF 330 (394)
T 4gt6_A 254 ARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAF 330 (394)
T ss_dssp EEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTT
T ss_pred eEcccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHh
Confidence 2233445555555555555444332 344455555666666554 3344444555666666666666543 444455566
Q ss_pred hcccccCeeecCCCccCCcCCCCcccccccceeeccCccccCCcccccccCCcCcEEEcccCc
Q 039595 579 EKLIHLSKLDLSHNILQEEIPPQVCNMESLEKLNLSHNNLSGFIPRCFEKMRSLSCIDICYNE 641 (1078)
Q Consensus 579 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~l~l~~N~ 641 (1078)
.++.+|+.+.|..+ ++.....+|.++.+|+.+++.+|... -..+....+|+.+.+..|.
T Consensus 331 ~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~---~~~~~~~~~L~~i~i~~~~ 389 (394)
T 4gt6_A 331 AGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQ---WNAISTDSGLQNLPVAPGS 389 (394)
T ss_dssp TTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHH---HHTCBCCCCC---------
T ss_pred hCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceee---hhhhhccCCCCEEEeCCCC
Confidence 66666666666543 44444455666666666666665443 1344555566666655443
No 401
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.31 E-value=5.7e-11 Score=136.70 Aligned_cols=331 Identities=9% Similarity=0.065 Sum_probs=154.4
Q ss_pred CCcccccC-CCCeeecCCcccCCCCCCcccCCCCCcEEeccccc---cCCCCCcccCCCcccceeecccccccCcccccc
Q 039595 215 PTVMGNLK-SLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNS---LSGSIPSIIGNLKSLHQLDLIENQLSGSIPLSF 290 (1078)
Q Consensus 215 p~~~~~l~-~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~---l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 290 (1078)
..+|.+.+ .|+.+.+-.+ ++.+-..+|.++++|+.+.+..|. ++.+-..+|.++.+|+.+.+..+ ++......|
T Consensus 56 ~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF 133 (394)
T 4gt6_A 56 DRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAF 133 (394)
T ss_dssp TTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTT
T ss_pred HhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhh
Confidence 34566663 5777777643 555556677777777777777664 44333456666666666665443 333333444
Q ss_pred ccccCCceeeecccCCCCCCCccccCCCccCeeeccccccCccCCCCCCCCCcCcEEEccCccCCCCCCccccccCCCCe
Q 039595 291 GNLSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLNGVIPPSIGNLSSLRNLSLFNNGLYGSIPEEIGYLKSLSE 370 (1078)
Q Consensus 291 ~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 370 (1078)
..+.+|+.+.+ ..+ ++.+....|..+.+|+.+.+.++ +.......|.. .+|+.
T Consensus 134 ~~c~~L~~i~l------------------------p~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~ 186 (394)
T 4gt6_A 134 HHCEELDTVTI------------------------PEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQ 186 (394)
T ss_dssp TTCTTCCEEEC------------------------CTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSE
T ss_pred hhhcccccccc------------------------cce-eeeecccceecccccccccccce-eeEeccccccc-cceeE
Confidence 45555554444 322 22233344455555555555433 22122222322 34555
Q ss_pred EEcccccCccccCCCCccCCCCceeecccCcCCCCCCccccccCCCCeEEccCccccccchhhccCCCCCcEecCCCCcc
Q 039595 371 LKLCKNNLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLKSLTSLKRVRFNQNNLVGKVYEAFGDHPNLTFLDLSQNNF 450 (1078)
Q Consensus 371 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 450 (1078)
+.+..+-. .....+|.++..+.......+.........+....... .....+.....+..+.+. +.+
T Consensus 187 i~ip~~~~-~i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~ip-~~v 253 (394)
T 4gt6_A 187 IHIPAKVT-RIGTNAFSECFALSTITSDSESYPAIDNVLYEKSANGD-----------YALIRYPSQREDPAFKIP-NGV 253 (394)
T ss_dssp EEECTTCC-EECTTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSC-----------EEEEECCTTCCCSEEECC-TTE
T ss_pred EEECCccc-ccccchhhhccccceecccccccccccceeeccccccc-----------ccccccccccccceEEcC-Ccc
Confidence 55543322 23344455555555544433332211100010000000 000001111112222221 122
Q ss_pred CCccCccccCCCCCceecccccccCCCCCccccCCCcccEEeccCCccCCCcccccccCccCcEEeccCCccCCCccccc
Q 039595 451 DGKISFNWRNLPKLDTFIVSMNNIFGSIPLEIGDSSKLQFLDLSSNHIVGKIPVQLEKLFSLNKLILSLNQLSGSVPLEF 530 (1078)
Q Consensus 451 ~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 530 (1078)
+.+...+|.+..+|+.+.+..+. .......|.++..|+.+.+. +.++.+...+|.++.+|+.+.+..+ ++.+...+|
T Consensus 254 ~~i~~~aF~~c~~L~~i~lp~~~-~~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF 330 (394)
T 4gt6_A 254 ARIETHAFDSCAYLASVKMPDSV-VSIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAF 330 (394)
T ss_dssp EEECTTTTTTCSSCCEEECCTTC-CEECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTT
T ss_pred eEcccceeeecccccEEeccccc-ceecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHh
Confidence 22333344444444444443221 12333445555666666664 3344455556666666666666543 444445667
Q ss_pred ccccccceeeccCccccCCCCcccccccccccccccCcccccccchhhhcccccCeeecCCCcc
Q 039595 531 GSLTELQYLDLSANKLSSSIPKSIGNLLKLYYLNLSNNQFSHTIPIEFEKLIHLSKLDLSHNIL 594 (1078)
Q Consensus 531 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 594 (1078)
.++.+|+.+.|..+ ++.+...+|.++++|+.+++.+|... ...|.....|+.+.+..|.+
T Consensus 331 ~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~---~~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 331 AGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQ---WNAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp TTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHH---HHTCBCCCCC----------
T ss_pred hCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceee---hhhhhccCCCCEEEeCCCCE
Confidence 77777777777544 55555667777777777777776543 13556666777777766654
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.29 E-value=5e-14 Score=160.02 Aligned_cols=141 Identities=20% Similarity=0.190 Sum_probs=71.3
Q ss_pred CcccEEeccCCccCCCccccc-ccCccCcEEeccCCccCCCccccc-----ccccccceeeccCccccCC----CCcccc
Q 039595 486 SKLQFLDLSSNHIVGKIPVQL-EKLFSLNKLILSLNQLSGSVPLEF-----GSLTELQYLDLSANKLSSS----IPKSIG 555 (1078)
Q Consensus 486 ~~L~~L~Ls~N~i~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~~~-----~~l~~L~~L~Ls~N~l~~~----~~~~~~ 555 (1078)
.+|++|+|++|.|+......+ ..+++|+.|+|++|+|+......+ ...++|++|+|++|.|+.. ++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 456666666666653332222 234456666666666653333332 2235566666666666532 222234
Q ss_pred cccccccccccCccccccc----chhhhcccccCeeecCCCccCCcCC----CCcccccccceeeccCccccCCccccc
Q 039595 556 NLLKLYYLNLSNNQFSHTI----PIEFEKLIHLSKLDLSHNILQEEIP----PQVCNMESLEKLNLSHNNLSGFIPRCF 626 (1078)
Q Consensus 556 ~l~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~~~----~~~~~l~~L~~L~L~~N~l~~~~~~~l 626 (1078)
.+++|++|+|++|+|++.. +..+...++|++|+|++|.|++... ..+...++|++|+|++|+|+......+
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L 259 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVL 259 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHH
Confidence 4556666666666665422 3334455566666666666654221 122234556666666666554443333
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.29 E-value=1.3e-13 Score=156.63 Aligned_cols=160 Identities=21% Similarity=0.241 Sum_probs=124.8
Q ss_pred CCcccEEeccCCccCCCcccccccC-----ccCcEEeccCCccCCCccccc-ccccccceeeccCccccCCCCcccc---
Q 039595 485 SSKLQFLDLSSNHIVGKIPVQLEKL-----FSLNKLILSLNQLSGSVPLEF-GSLTELQYLDLSANKLSSSIPKSIG--- 555 (1078)
Q Consensus 485 l~~L~~L~Ls~N~i~~~~~~~~~~l-----~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~--- 555 (1078)
++.|+.|+|++|.|+......+... .+|+.|+|++|.|+......+ ..+++|+.|+|++|.|++.....+.
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 3579999999999986554444433 699999999999975443333 4568899999999999865555553
Q ss_pred --cccccccccccCcccccc----cchhhhcccccCeeecCCCccCCcC----CCCcccccccceeeccCccccCC----
Q 039595 556 --NLLKLYYLNLSNNQFSHT----IPIEFEKLIHLSKLDLSHNILQEEI----PPQVCNMESLEKLNLSHNNLSGF---- 621 (1078)
Q Consensus 556 --~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~L~~N~l~~~---- 621 (1078)
..++|++|+|++|+|+.. ++..+..+++|++|||++|.|++.. ...+...++|++|+|++|.|+..
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHH
Confidence 357899999999999753 3444577899999999999997632 34566778999999999999864
Q ss_pred cccccccCCcCcEEEcccCcCCC
Q 039595 622 IPRCFEKMRSLSCIDICYNELQG 644 (1078)
Q Consensus 622 ~~~~l~~l~~L~~l~l~~N~l~~ 644 (1078)
+...+...++|++|||++|+++.
T Consensus 231 l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 231 LARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp HHHHHHHCSSCCEEECTTSSCCH
T ss_pred HHHHHHhCCCCCEEeccCCCCCH
Confidence 34455667999999999999874
No 404
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.22 E-value=8.7e-12 Score=141.02 Aligned_cols=102 Identities=24% Similarity=0.196 Sum_probs=53.0
Q ss_pred EeccCC-ccCCCcccccccCccCcEEeccC-CccCCCcccccccccccceeeccCccccCCCCcccccccccccccccCc
Q 039595 491 LDLSSN-HIVGKIPVQLEKLFSLNKLILSL-NQLSGSVPLEFGSLTELQYLDLSANKLSSSIPKSIGNLLKLYYLNLSNN 568 (1078)
Q Consensus 491 L~Ls~N-~i~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 568 (1078)
++++++ +|++ +|. +..+++|+.|+|++ |+|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 13 v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 455555 5553 344 55555555555553 5555444455555555555555555555555555555555555555555
Q ss_pred ccccccchhhhcccccCeeecCCCccC
Q 039595 569 QFSHTIPIEFEKLIHLSKLDLSHNILQ 595 (1078)
Q Consensus 569 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 595 (1078)
+|++..+..|..+. |+.|+|++|.+.
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 55544444444333 555555555554
No 405
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.20 E-value=2.5e-11 Score=137.31 Aligned_cols=92 Identities=24% Similarity=0.240 Sum_probs=46.5
Q ss_pred ccCcccCCCCCcEEEccC-CCCCCCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEeccccccCCCCCcccCC
Q 039595 190 IPSSLGNLSKLALLYLNN-NSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSLSGSIPSIIGN 268 (1078)
Q Consensus 190 ~p~~l~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~ 268 (1078)
+|. |+.+++|+.|+|++ |+|++..|..|++|++|++|+|++|+|++..|..|.+|++|++|+|++|+|++.++..|..
T Consensus 24 ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 102 (347)
T 2ifg_A 24 LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQG 102 (347)
T ss_dssp TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCS
T ss_pred cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHccc
Confidence 444 44445555555553 5554444444555555555555555555554545555555555555555555444444444
Q ss_pred Ccccceeeccccccc
Q 039595 269 LKSLHQLDLIENQLS 283 (1078)
Q Consensus 269 l~~L~~L~Ls~N~l~ 283 (1078)
++ |+.|+|++|.+.
T Consensus 103 ~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 103 LS-LQELVLSGNPLH 116 (347)
T ss_dssp CC-CCEEECCSSCCC
T ss_pred CC-ceEEEeeCCCcc
Confidence 33 555555555554
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.17 E-value=7.7e-11 Score=127.50 Aligned_cols=148 Identities=13% Similarity=0.025 Sum_probs=114.9
Q ss_pred HHHHhhcCCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCC-CCceeeEEeeeecC
Q 039595 745 EIIKATDDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIR-HRNIVKFHGFCSNA 823 (1078)
Q Consensus 745 ~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~ 823 (1078)
.+....+.|+.....+.|+++.||++... ++.+++|+....... ....+.+|+.+++.+. +..+.++++++.+.
T Consensus 8 ~l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~----~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~ 82 (263)
T 3tm0_A 8 ELKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKG----TTYDVEREKDMMLWLEGKLPVPKVLHFERHD 82 (263)
T ss_dssp HHHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTT----STTCHHHHHHHHHHHTTTSCCCCEEEEEEET
T ss_pred HHHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCC----CHHHHHHHHHHHHHHhcCCCCCeEEEEEecC
Confidence 34445567888888999999999999754 789999998653211 1234778888888884 67788999999888
Q ss_pred CeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------
Q 039595 824 RHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDC----------------------------- 874 (1078)
Q Consensus 824 ~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~----------------------------- 874 (1078)
+..|+||||++|.++.+... +..+...++.+++++++.||+..
T Consensus 83 ~~~~lv~e~i~G~~l~~~~~--------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (263)
T 3tm0_A 83 GWSNLLMSEADGVLCSEEYE--------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVD 154 (263)
T ss_dssp TEEEEEEECCSSEEHHHHCC--------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCS
T ss_pred CceEEEEEecCCeehhhccC--------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccc
Confidence 99999999999999987641 11233468899999999999810
Q ss_pred ---------------------------CCCcEecCCCCCCeeeCCCCcEEEecccccc
Q 039595 875 ---------------------------LPSIIHRDISSKNVLLDLEFEAHVSDFGIAK 905 (1078)
Q Consensus 875 ---------------------------~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~ 905 (1078)
.+.++|||++|.||+++.++.+.|+||+.+.
T Consensus 155 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 155 CENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp GGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1358999999999999876667899998875
No 407
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.08 E-value=4.8e-09 Score=119.94 Aligned_cols=316 Identities=9% Similarity=0.027 Sum_probs=138.2
Q ss_pred CcccCCCCCcEEeccccccCCCCCcccCCCcccceeecccccccCccccccccccCCceeeecccCCCCCCCccccCCCc
Q 039595 240 CTLDNLSNLDTLFLYKNSLSGSIPSIIGNLKSLHQLDLIENQLSGSIPLSFGNLSSWTLMSLFSNSLSGSIPPILGNLKS 319 (1078)
Q Consensus 240 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~ 319 (1078)
+++....+|+.+.+.. .++.+-..+|.++.+|+.++|..+ ++.+-..+|.++ +|+.+.+..+ ++......|.+ .+
T Consensus 40 ~~~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~ 114 (379)
T 4h09_A 40 PWYKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TD 114 (379)
T ss_dssp TTGGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CC
T ss_pred cccccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CC
Confidence 3566667788887764 355444567888888888888654 554555566665 4555544322 32222223333 24
Q ss_pred cCeeeccccccCccCCCCCCCCCcCcEEEccCccCCCCCCccccccCCCCeEEcccccCccccCCCCccCCCCceeeccc
Q 039595 320 LSTLGLYLNQLNGVIPPSIGNLSSLRNLSLFNNGLYGSIPEEIGYLKSLSELKLCKNNLSGVIPHSVGNLTGLVLLNMCE 399 (1078)
Q Consensus 320 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 399 (1078)
|+.+.+..+ ++......|.+. +|+.+.+..+ ++......|....+++.+.+..+.........+. .
T Consensus 115 L~~i~lp~~-~~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~-~---------- 180 (379)
T 4h09_A 115 LDDFEFPGA-TTEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVL-Y---------- 180 (379)
T ss_dssp CSEEECCTT-CCEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEE-E----------
T ss_pred cccccCCCc-cccccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeeccccee-c----------
Confidence 555555433 222222333332 3333333322 2212233344444444444433322111000000 0
Q ss_pred CcCCCCCCccccccCCCCeEEccCccccccchhhccCCCCCcEecCCCCccCCccCccccCCCCCceecccccccCCCCC
Q 039595 400 NHLFGPIPKSLKSLTSLKRVRFNQNNLVGKVYEAFGDHPNLTFLDLSQNNFDGKISFNWRNLPKLDTFIVSMNNIFGSIP 479 (1078)
Q Consensus 400 N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~ 479 (1078)
+. .......+.....+..+.+.. ....+....|....+|+.+.+..+ +..+...+|
T Consensus 181 ~~-~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f--------------------- 236 (379)
T 4h09_A 181 NK-NKTILESYPAAKTGTEFTIPS-TVKTVTAYGFSYGKNLKKITITSG-VTTLGDGAF--------------------- 236 (379)
T ss_dssp ET-TSSEEEECCTTCCCSEEECCT-TCCEECTTTTTTCSSCSEEECCTT-CCEECTTTT---------------------
T ss_pred cc-ccceecccccccccccccccc-ceeEEeecccccccccceeeeccc-eeEEccccc---------------------
Confidence 00 001111222222333332221 122233334444444554444332 233333334
Q ss_pred ccccCCCcccEEeccCCccCCCcccccccCccCcEEeccCCccCCCcccccccccccceeeccCccccCCCCcccccccc
Q 039595 480 LEIGDSSKLQFLDLSSNHIVGKIPVQLEKLFSLNKLILSLNQLSGSVPLEFGSLTELQYLDLSANKLSSSIPKSIGNLLK 559 (1078)
Q Consensus 480 ~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 559 (1078)
.++..|+.+.+..+ ++.+...+|.++.+|+.+.+..+ ++.+....|.++.+|+.+++.++.++.+...+|.++.+
T Consensus 237 ---~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~ 311 (379)
T 4h09_A 237 ---YGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVK 311 (379)
T ss_dssp ---TTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTT
T ss_pred ---cCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCC
Confidence 44444444444433 33333444444555555554332 33233344555555555555555554444455555555
Q ss_pred cccccccCcccccccchhhhcccccCeeecCCCccCCcCCCCcccc
Q 039595 560 LYYLNLSNNQFSHTIPIEFEKLIHLSKLDLSHNILQEEIPPQVCNM 605 (1078)
Q Consensus 560 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 605 (1078)
|+.++|..+ ++.+...+|.++.+|+.+.+..+ ++.....+|.++
T Consensus 312 L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c 355 (379)
T 4h09_A 312 LSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGS 355 (379)
T ss_dssp CCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTS
T ss_pred CCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCC
Confidence 555555433 44344455555555555555443 443334445444
No 408
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.01 E-value=2e-08 Score=114.77 Aligned_cols=131 Identities=15% Similarity=0.139 Sum_probs=62.0
Q ss_pred CCCCCCCCcCcEEEccCccCCCCCCccccccCCCCeEEcccccCccccCCCCccCCCCceeecccCcCCCCCCccccccC
Q 039595 335 PPSIGNLSSLRNLSLFNNGLYGSIPEEIGYLKSLSELKLCKNNLSGVIPHSVGNLTGLVLLNMCENHLFGPIPKSLKSLT 414 (1078)
Q Consensus 335 p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~ 414 (1078)
...+..+.+|+.+.+..+ +.......+..+.+|+.+.+..+ ++.+...+|.++.+|+.+.+..+ +......+|.+++
T Consensus 210 ~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~ 286 (379)
T 4h09_A 210 AYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCS 286 (379)
T ss_dssp TTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCT
T ss_pred ecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccc
Confidence 344455555555555433 22233344555555555555443 44344445555555555555332 3333334455555
Q ss_pred CCCeEEccCccccccchhhccCCCCCcEecCCCCccCCccCccccCCCCCceecc
Q 039595 415 SLKRVRFNQNNLVGKVYEAFGDHPNLTFLDLSQNNFDGKISFNWRNLPKLDTFIV 469 (1078)
Q Consensus 415 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l 469 (1078)
+|+.+.+.++.+..+...+|.++.+|+.++|..+ ++.+...+|.++.+|+++.+
T Consensus 287 ~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~i 340 (379)
T 4h09_A 287 NLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISY 340 (379)
T ss_dssp TCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCC
T ss_pred ccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEE
Confidence 5555555555555555555555555555555432 44444444444444444433
No 409
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.99 E-value=3.8e-12 Score=135.57 Aligned_cols=123 Identities=11% Similarity=0.057 Sum_probs=57.9
Q ss_pred CCCcccceEeeCCCCeEEEeccCc---cccCCcccCCccCCCCCCcEEeccCCcccccCCC-CCCCCCCcce--eccCCC
Q 039595 63 SPCSWFGISCNHAGSRVISINLST---LCLNGTFQDFSFSSFPHLVNLNLSFNLFFGNIPP-QIGNLSKLQN--LDLGNN 136 (1078)
Q Consensus 63 ~~c~w~gv~C~~~~~~v~~l~l~~---~~l~g~~~~~~~~~l~~L~~L~L~~n~~~~~~p~-~~~~l~~L~~--L~Ls~n 136 (1078)
..|.|.|+.|+..+.+|+.+...+ ..+.|.+.+..+..++. .|...+|...+.++- .+...+.|+. ++++.|
T Consensus 76 ~l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N 153 (267)
T 3rw6_A 76 ALKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLN 153 (267)
T ss_dssp HHHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTT
T ss_pred HHHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCC
Confidence 358999999997766776555443 23334443222222221 122233333332221 1334444554 555555
Q ss_pred ccC---CCCCccccCccceeEEEccCccCCC--CCCcccccccccceeeccccccc
Q 039595 137 QLS---GVISPEIGKLNQLRRLYLDMNQLHG--TIPPVIGQLSLIHEFSFCHNNVS 187 (1078)
Q Consensus 137 ~l~---~~~p~~~~~l~~L~~L~L~~n~l~~--~~p~~i~~l~~L~~L~l~~n~~~ 187 (1078)
... +.++....++++|+.|+|++|+|++ .+|..++.+++|+.|+|++|.++
T Consensus 154 ~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~ 209 (267)
T 3rw6_A 154 RRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELK 209 (267)
T ss_dssp SHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCC
T ss_pred HHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccC
Confidence 322 1111112345666666666666664 33344444444444444444444
No 410
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.96 E-value=5.1e-10 Score=120.79 Aligned_cols=137 Identities=15% Similarity=0.090 Sum_probs=99.8
Q ss_pred cCCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCc--eeeEEeeeecCCeeEE
Q 039595 751 DDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRN--IVKFHGFCSNARHSFL 828 (1078)
Q Consensus 751 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~~~~~l 828 (1078)
..|......+.|..+.||++...+|+.+++|+.... ....+..|+.+++.+.+.+ +.+++++...++..++
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~-------~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~ 92 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG-------ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWL 92 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC-------TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEE
T ss_pred CCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc-------cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEE
Confidence 345443333466679999998777888999997543 1234667888888875434 5668888888888999
Q ss_pred EEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcC----------------------------------
Q 039595 829 VCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDC---------------------------------- 874 (1078)
Q Consensus 829 v~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~---------------------------------- 874 (1078)
||||++|.++. ... .+ ...++.++++.+..||+..
T Consensus 93 v~e~i~G~~l~--~~~------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (264)
T 1nd4_A 93 LLGEVPGQDLL--SSH------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEE 161 (264)
T ss_dssp EEECCSSEETT--TSC------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGG
T ss_pred EEEecCCcccC--cCc------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhh
Confidence 99999998873 211 11 2357778888888888742
Q ss_pred ---------------------CCCcEecCCCCCCeeeCCCCcEEEecccccc
Q 039595 875 ---------------------LPSIIHRDISSKNVLLDLEFEAHVSDFGIAK 905 (1078)
Q Consensus 875 ---------------------~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~ 905 (1078)
...++|||++|.||+++.++.+.|+|||.+.
T Consensus 162 ~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 162 HQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp GTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred ccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1129999999999999877667899999876
No 411
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.84 E-value=6.8e-09 Score=117.68 Aligned_cols=144 Identities=15% Similarity=0.226 Sum_probs=107.1
Q ss_pred CccceeccCCceeEEEEEeCCCCEEEEEEec--cccccCChhhHHHHHHHHHHHhcCC--CCceeeEEeeeecC---Cee
Q 039595 754 DEKFCIGKGGQGSVYKAELPSGDIVAVKKFN--SQLLSGNMADQDEFLNVVLALNEIR--HRNIVKFHGFCSNA---RHS 826 (1078)
Q Consensus 754 ~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~--~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~---~~~ 826 (1078)
...+.++.|.++.||++... +..+++|+.. .... ......+.+|+.+++.+. +..+++++.++.+. +..
T Consensus 41 ~~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~---~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~ 116 (359)
T 3dxp_A 41 LSVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKL---LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRA 116 (359)
T ss_dssp CEEEECCC-CCSCEEEEECS-SCEEEEECCCC-------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSC
T ss_pred ceEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCC---CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCe
Confidence 34667999999999999875 4678888865 3211 112345778888888886 45688899988766 458
Q ss_pred EEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcC--------------------------------
Q 039595 827 FLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDC-------------------------------- 874 (1078)
Q Consensus 827 ~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-------------------------------- 874 (1078)
|+||||++|..+.+.. ...++..+...++.+++++|+.||+..
T Consensus 117 ~~vme~v~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (359)
T 3dxp_A 117 FYIMEFVSGRVLWDQS-----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSET 191 (359)
T ss_dssp EEEEECCCCBCCCCTT-----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCC
T ss_pred EEEEEecCCeecCCCc-----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCC
Confidence 9999999997774321 234678888999999999999999831
Q ss_pred -----------------------CCCcEecCCCCCCeeeCCCCc--EEEeccccccc
Q 039595 875 -----------------------LPSIIHRDISSKNVLLDLEFE--AHVSDFGIAKF 906 (1078)
Q Consensus 875 -----------------------~~~ivH~Dlk~~NIll~~~~~--~kl~DfG~a~~ 906 (1078)
.+.++|||+++.||+++.++. +.|.||+.+..
T Consensus 192 ~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 192 ESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp SCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred cCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 246899999999999997753 68999998864
No 412
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.81 E-value=1.9e-09 Score=121.07 Aligned_cols=85 Identities=15% Similarity=0.228 Sum_probs=48.2
Q ss_pred cccccceeeccCccccCCCCcccc---cccccccccccCccccccc----chhhhcccccCeeecCCCccCCcCCCCccc
Q 039595 532 SLTELQYLDLSANKLSSSIPKSIG---NLLKLYYLNLSNNQFSHTI----PIEFEKLIHLSKLDLSHNILQEEIPPQVCN 604 (1078)
Q Consensus 532 ~l~~L~~L~Ls~N~l~~~~~~~~~---~l~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 604 (1078)
.+++|++|+|++|.+.+..+..+. .+++|++|+|+.|.|++.. +..+..+++|+.|+|++|.|+......+..
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~ 329 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQK 329 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHH
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHH
Confidence 356677777777666543322222 3567777777777776532 223345677777777777776433222222
Q ss_pred ccccceeeccCcc
Q 039595 605 MESLEKLNLSHNN 617 (1078)
Q Consensus 605 l~~L~~L~L~~N~ 617 (1078)
.- ...+++++|+
T Consensus 330 al-g~~~~~~~~~ 341 (362)
T 2ra8_A 330 SL-PMKIDVSDSQ 341 (362)
T ss_dssp HC-CSEEECCSBC
T ss_pred Hc-CCEEEecCCc
Confidence 00 2457777776
No 413
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.79 E-value=9.7e-10 Score=123.54 Aligned_cols=211 Identities=14% Similarity=0.209 Sum_probs=102.6
Q ss_pred CCcceeccCCCccCC-CC-------CccccCccceeEEEccCccCCCCCCcccccccccceeecccccccCCccCcccCC
Q 039595 126 SKLQNLDLGNNQLSG-VI-------SPEIGKLNQLRRLYLDMNQLHGTIPPVIGQLSLIHEFSFCHNNVSGRIPSSLGNL 197 (1078)
Q Consensus 126 ~~L~~L~Ls~n~l~~-~~-------p~~~~~l~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~l~~n~~~~~~p~~l~~l 197 (1078)
++++.|.+......| .. ..++.++++|+.|.+..+..... .++... .+.++..+..+
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~--------------~is~~~-~~~L~~ll~~~ 171 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQ--------------EISWIE-QVDLSPVLDAM 171 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTC--------------CGGGCB-CCBCHHHHHTC
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhc--------------cccccc-ccCHHHHHhcC
Confidence 456677776655442 11 23455667777777765432100 000000 01233344556
Q ss_pred CCCcEEEccCCCCCCCCCCcccccCCCCeeecCCcccCCCCCCccc--CCCCCcEEeccc--cccCCC-----CCccc--
Q 039595 198 SKLALLYLNNNSLFGYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLD--NLSNLDTLFLYK--NSLSGS-----IPSII-- 266 (1078)
Q Consensus 198 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~--~l~~L~~L~L~~--N~l~~~-----~p~~~-- 266 (1078)
++|+.|+|++|.-. .++. + .+++|+.|+|..|.++......+. .+++|+.|+|+. |...+. +...+
T Consensus 172 P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~ 248 (362)
T 2ra8_A 172 PLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSK 248 (362)
T ss_dssp TTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCT
T ss_pred CCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhc
Confidence 66777777665311 1222 2 256666666666665532222222 456666666642 211111 00111
Q ss_pred CCCcccceeecccccccCccccccccccCCceeeecccCCCCCCCccccCCCccCeeeccccccCcc----CCCCCCCCC
Q 039595 267 GNLKSLHQLDLIENQLSGSIPLSFGNLSSWTLMSLFSNSLSGSIPPILGNLKSLSTLGLYLNQLNGV----IPPSIGNLS 342 (1078)
Q Consensus 267 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~----~p~~l~~l~ 342 (1078)
..+++|++|+|++|.+.+..+..+.. ...+++|++|+|+.|.+++. ++..+..++
T Consensus 249 ~~~p~Lr~L~L~~~~i~~~~~~~la~---------------------a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~ 307 (362)
T 2ra8_A 249 DRFPNLKWLGIVDAEEQNVVVEMFLE---------------------SDILPQLETMDISAGVLTDEGARLLLDHVDKIK 307 (362)
T ss_dssp TTCTTCCEEEEESCTTHHHHHHHHHH---------------------CSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHT
T ss_pred CCCCCcCEEeCCCCCCchHHHHHHHh---------------------CccCCCCCEEECCCCCCChHHHHHHHhhcccCC
Confidence 13455555655555554322211110 02356677777777776642 233445567
Q ss_pred cCcEEEccCccCCCCCCccccc-cCCCCeEEccccc
Q 039595 343 SLRNLSLFNNGLYGSIPEEIGY-LKSLSELKLCKNN 377 (1078)
Q Consensus 343 ~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~L~~N~ 377 (1078)
+|+.|+|++|.+++..-..+.. + ...++++.++
T Consensus 308 ~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 308 HLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp TCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred cceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 7788888877776443333332 2 3557777776
No 414
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.72 E-value=5.2e-09 Score=115.64 Aligned_cols=182 Identities=21% Similarity=0.220 Sum_probs=122.7
Q ss_pred cceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcC-CCCc--eeeEEeeeecCC---eeEEE
Q 039595 756 KFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEI-RHRN--IVKFHGFCSNAR---HSFLV 829 (1078)
Q Consensus 756 ~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~n--iv~l~~~~~~~~---~~~lv 829 (1078)
.+.++.|.+..||++. +.+++|+.... .....+.+|..+++.+ .+.. +.+++.....+. ..|+|
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~------~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~v 94 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS------RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAG 94 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH------HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc------chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEE
Confidence 4568999999999863 45889985432 2356788899998877 3322 445555544333 45899
Q ss_pred EeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------
Q 039595 830 CEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDC----------------------------------- 874 (1078)
Q Consensus 830 ~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~----------------------------------- 874 (1078)
||+++|.++.+... ..++.+++..++.++++.++.||+..
T Consensus 95 m~~i~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (304)
T 3sg8_A 95 FTKIKGVPLTPLLL-----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQ 169 (304)
T ss_dssp EECCCCEECCHHHH-----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHH
T ss_pred EcccCCeECCcccc-----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCccc
Confidence 99999988765331 34677888889999999999999611
Q ss_pred --------------------CCCcEecCCCCCCeeeCC--CCcEEEecccccccccCCCCCceeecccccc---cccccc
Q 039595 875 --------------------LPSIIHRDISSKNVLLDL--EFEAHVSDFGIAKFVEPYSSNRTEFVGTFGY---AAPEIA 929 (1078)
Q Consensus 875 --------------------~~~ivH~Dlk~~NIll~~--~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y---~aPE~~ 929 (1078)
.+.++|+|++|.||+++. ++.+.++||+.+...+... .......+ ..|+..
T Consensus 170 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~----Dl~~~~~~~~~~~~~~~ 245 (304)
T 3sg8_A 170 MKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDN----DFISLMEDDEEYGMEFV 245 (304)
T ss_dssp HHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTH----HHHTTCCTTTSCCHHHH
T ss_pred HHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHH----HHHHHHhhccccCHHHH
Confidence 135799999999999998 4568899999987543211 00111111 222211
Q ss_pred cc-----C---------CCCccchhHHHHHHHHHHHhCCCC
Q 039595 930 YT-----M---------RATEKYDVYSFGVLVFEVIKGNHP 956 (1078)
Q Consensus 930 ~~-----~---------~~~~~sDvwSlG~il~elltG~~p 956 (1078)
.. + ......+.|++|.++|.+.+|+.+
T Consensus 246 ~~~l~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~ 286 (304)
T 3sg8_A 246 SKILNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMD 286 (304)
T ss_dssp HHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHH
Confidence 10 0 012236899999999999999988
No 415
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.55 E-value=2.3e-07 Score=103.17 Aligned_cols=138 Identities=16% Similarity=0.152 Sum_probs=103.3
Q ss_pred CCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCC----CceeeEEeeeecCCeeE
Q 039595 752 DFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRH----RNIVKFHGFCSNARHSF 827 (1078)
Q Consensus 752 ~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~l~~~~~~~~~~~ 827 (1078)
.+...+.++.|....||++ |+.+++|+.... .....+..|..+++.+.+ ..+.+++++ +..+
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~------~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~ 103 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD------SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRF 103 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH------HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSC
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH------HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcE
Confidence 6667788999999999998 667889976332 223457889988888865 234555555 4678
Q ss_pred EEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCC--------------------------------
Q 039595 828 LVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCL-------------------------------- 875 (1078)
Q Consensus 828 lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~-------------------------------- 875 (1078)
+||||++|.++.+.. ...++.++...++.++++.++.||+...
T Consensus 104 lvme~i~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (320)
T 3r70_A 104 NIMKYIKGERITYEQ-----YHKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKE 178 (320)
T ss_dssp EEEECCCCBCCCHHH-----HTTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHT
T ss_pred EEEeecCCccccccc-----cccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhc
Confidence 999999998886332 1235667778888888888888885422
Q ss_pred ----------------------------CCcEecCCCCCCeeeCCCCcEEEeccccccccc
Q 039595 876 ----------------------------PSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVE 908 (1078)
Q Consensus 876 ----------------------------~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~ 908 (1078)
+.++|+|++|.||+++.++.+.|+||+.+...+
T Consensus 179 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~ 239 (320)
T 3r70_A 179 QLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGD 239 (320)
T ss_dssp TCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEEC
T ss_pred ccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCC
Confidence 234999999999999987668999999987543
No 416
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.45 E-value=2.7e-08 Score=105.87 Aligned_cols=80 Identities=31% Similarity=0.365 Sum_probs=50.9
Q ss_pred ccccccccccccCccccc--ccchhhhcccccCeeecCCCccCCcCCCCccccc--ccceeeccCccccCCcc-------
Q 039595 555 GNLLKLYYLNLSNNQFSH--TIPIEFEKLIHLSKLDLSHNILQEEIPPQVCNME--SLEKLNLSHNNLSGFIP------- 623 (1078)
Q Consensus 555 ~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~--~L~~L~L~~N~l~~~~~------- 623 (1078)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|++.+..|
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 345667777777777765 2345566777777777777777653 2333344 77777777777775444
Q ss_pred cccccCCcCcEEE
Q 039595 624 RCFEKMRSLSCID 636 (1078)
Q Consensus 624 ~~l~~l~~L~~l~ 636 (1078)
..+..+|+|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 2356777777665
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.41 E-value=2e-08 Score=101.78 Aligned_cols=17 Identities=18% Similarity=0.319 Sum_probs=8.4
Q ss_pred cCCCcccEEeccCC-ccC
Q 039595 483 GDSSKLQFLDLSSN-HIV 499 (1078)
Q Consensus 483 ~~l~~L~~L~Ls~N-~i~ 499 (1078)
...++|++|+|++| .|.
T Consensus 33 ~~~~~L~~L~L~~n~~i~ 50 (185)
T 1io0_A 33 NNDPDLEEVNLNNIMNIP 50 (185)
T ss_dssp TTCTTCCEEECTTCTTCC
T ss_pred hcCCCCCEEEecCCCCCC
Confidence 33445555555555 444
No 418
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.40 E-value=5e-08 Score=98.85 Aligned_cols=116 Identities=11% Similarity=0.085 Sum_probs=66.6
Q ss_pred cccccCccCcEEeccCC-ccCCC----cccccccccccceeeccCccccCCC----CcccccccccccccccCcccccc-
Q 039595 504 VQLEKLFSLNKLILSLN-QLSGS----VPLEFGSLTELQYLDLSANKLSSSI----PKSIGNLLKLYYLNLSNNQFSHT- 573 (1078)
Q Consensus 504 ~~~~~l~~L~~L~Ls~N-~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~- 573 (1078)
..+...+.|++|+|++| .|... +...+...++|++|+|++|.|.... ...+...++|++|+|++|+|++.
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g 109 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSG 109 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHH
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHH
Confidence 34455566777777776 66532 2334445566777777777665432 22333445677777777776543
Q ss_pred ---cchhhhcccccCeeec--CCCccCCcCC----CCcccccccceeeccCcccc
Q 039595 574 ---IPIEFEKLIHLSKLDL--SHNILQEEIP----PQVCNMESLEKLNLSHNNLS 619 (1078)
Q Consensus 574 ---~~~~~~~l~~L~~L~L--s~N~l~~~~~----~~~~~l~~L~~L~L~~N~l~ 619 (1078)
+...+...+.|++|+| ++|.|+.... ..+...++|++|+|++|.+.
T Consensus 110 ~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 110 ILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 2334555566777777 6677654322 22333466777777777764
No 419
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.18 E-value=5.8e-06 Score=89.31 Aligned_cols=134 Identities=16% Similarity=0.164 Sum_probs=97.8
Q ss_pred eeccCCce-eEEEEEeC-CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCC-CCceeeEEeeeecCCeeEEEEeecC
Q 039595 758 CIGKGGQG-SVYKAELP-SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIR-HRNIVKFHGFCSNARHSFLVCEYLH 834 (1078)
Q Consensus 758 ~lG~G~~g-~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~E~~~ 834 (1078)
.+..|..| .||+.... ++..+++|+-... ....+..|...++.+. +--|.++++++.+++..++|||+++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~-------~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~ 103 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS-------VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIP 103 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH-------HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCC
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC-------CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeC
Confidence 45556665 68988654 4667999986432 2456778888888773 3347788999998999999999999
Q ss_pred CCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcC----------------------------------------
Q 039595 835 RGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDC---------------------------------------- 874 (1078)
Q Consensus 835 ~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~---------------------------------------- 874 (1078)
|.++.+.... ...+...++.+++..+..||...
T Consensus 104 G~~~~~~~~~-------~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (272)
T 4gkh_A 104 GKTAFQVLEE-------YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPV 176 (272)
T ss_dssp SEEHHHHHHH-------CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCH
T ss_pred CccccccccC-------CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHH
Confidence 9888776521 11334456777777777777531
Q ss_pred ---------------CCCcEecCCCCCCeeeCCCCcEEEecccccc
Q 039595 875 ---------------LPSIIHRDISSKNVLLDLEFEAHVSDFGIAK 905 (1078)
Q Consensus 875 ---------------~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~ 905 (1078)
.+.++|+|+.+.||+++.++.+-|+||+.+.
T Consensus 177 ~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 177 EQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 1136899999999999988777899999876
No 420
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.14 E-value=1.2e-05 Score=88.52 Aligned_cols=137 Identities=18% Similarity=0.134 Sum_probs=97.0
Q ss_pred cceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCC---ceeeEEeeee-cCCeeEEEEe
Q 039595 756 KFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHR---NIVKFHGFCS-NARHSFLVCE 831 (1078)
Q Consensus 756 ~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~E 831 (1078)
.+.++.|....||+. |+.+++|+... ......+..|..+++.+.+. .|.+.+.++. ..+..++|||
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~------~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e 93 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS------QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYR 93 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS------HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEE
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC------chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEe
Confidence 456889999999998 56788888422 22356788999999998642 3667777764 4566789999
Q ss_pred ecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhc--------------------------------------
Q 039595 832 YLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHD-------------------------------------- 873 (1078)
Q Consensus 832 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-------------------------------------- 873 (1078)
|++|..+.+... ..++..+...++.++++.|+.||+.
T Consensus 94 ~i~G~~l~~~~~-----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~ 168 (306)
T 3tdw_A 94 KVQGQILGEDGM-----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESL 168 (306)
T ss_dssp CCCSEECHHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHH
T ss_pred ccCCeECchhhh-----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhh
Confidence 999988866321 1234555666666666666666643
Q ss_pred -------------------CCCCcEecCCCCCCeeeCC---CCc-EEEecccccccc
Q 039595 874 -------------------CLPSIIHRDISSKNVLLDL---EFE-AHVSDFGIAKFV 907 (1078)
Q Consensus 874 -------------------~~~~ivH~Dlk~~NIll~~---~~~-~kl~DfG~a~~~ 907 (1078)
..+.++|+|+++.||+++. ++. +.|+||+.+..-
T Consensus 169 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 169 RDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 1235699999999999987 455 589999988643
No 421
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.05 E-value=8.3e-06 Score=88.58 Aligned_cols=78 Identities=18% Similarity=0.207 Sum_probs=60.5
Q ss_pred CCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCC---ceeeEEeeeecCCeeEEE
Q 039595 753 FDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHR---NIVKFHGFCSNARHSFLV 829 (1078)
Q Consensus 753 ~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~~~~~~~lv 829 (1078)
....+.||.|.++.||++...+|+.++||+..... ......|..|++.++.+.+. .+++++++. ..++|
T Consensus 17 ~~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~----~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lv 88 (288)
T 3d1u_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDA----PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLA 88 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTC----CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEE
T ss_pred ccceeeeCCcchhheEEEEeCCCCeEEEEecCCCC----cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEE
Confidence 34467899999999999988889999999964321 11235688999999999765 577888763 36899
Q ss_pred EeecCCCCH
Q 039595 830 CEYLHRGSL 838 (1078)
Q Consensus 830 ~E~~~~g~L 838 (1078)
|||++++.+
T Consensus 89 me~l~g~~~ 97 (288)
T 3d1u_A 89 MEWVDERPP 97 (288)
T ss_dssp EECCCCCCC
T ss_pred EEecccCCC
Confidence 999999874
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.98 E-value=2.9e-05 Score=87.44 Aligned_cols=78 Identities=8% Similarity=0.147 Sum_probs=56.9
Q ss_pred CCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCc--eeeEEeeeecC-CeeEE
Q 039595 752 DFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRN--IVKFHGFCSNA-RHSFL 828 (1078)
Q Consensus 752 ~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~-~~~~l 828 (1078)
.....+.++.|....+|+... +|+.+++|+.... ..+..|..+++.+.... +.+++.++... +..|+
T Consensus 42 ~~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~---------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~l 111 (362)
T 3ovc_A 42 SVSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA---------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYC 111 (362)
T ss_dssp CCEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC---------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEE
T ss_pred CCceEEECCCCCcceEEEEEE-CCcEEEEEeCCch---------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEE
Confidence 344567789999999999975 4788999986432 24777888888775433 56777776654 67899
Q ss_pred EEeecCCCCHH
Q 039595 829 VCEYLHRGSLA 839 (1078)
Q Consensus 829 v~E~~~~g~L~ 839 (1078)
||||++|..+.
T Consensus 112 v~e~l~G~~l~ 122 (362)
T 3ovc_A 112 ISRRAQGVTLQ 122 (362)
T ss_dssp EEECCCSEETT
T ss_pred EEEecCCCCcc
Confidence 99999986553
No 423
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.81 E-value=3.3e-06 Score=83.10 Aligned_cols=83 Identities=12% Similarity=0.089 Sum_probs=46.8
Q ss_pred ccceeeccCccccCCCCcccccccccccccccCcc-cccccchhhhcc----cccCeeecCCC-ccCCcCCCCccccccc
Q 039595 535 ELQYLDLSANKLSSSIPKSIGNLLKLYYLNLSNNQ-FSHTIPIEFEKL----IHLSKLDLSHN-ILQEEIPPQVCNMESL 608 (1078)
Q Consensus 535 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l----~~L~~L~Ls~N-~l~~~~~~~~~~l~~L 608 (1078)
+|+.|||+++.|+...-..+..+++|++|+|++|. |++..-..+..+ ++|+.|+|+++ +|++.--..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45666666666555444555556666666666663 554444444443 35666666665 3555433445556666
Q ss_pred ceeeccCcc
Q 039595 609 EKLNLSHNN 617 (1078)
Q Consensus 609 ~~L~L~~N~ 617 (1078)
++|+|++++
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 666666664
No 424
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.71 E-value=8.4e-06 Score=80.24 Aligned_cols=83 Identities=17% Similarity=0.173 Sum_probs=43.8
Q ss_pred CcccEEeccCCccCCCcccccccCccCcEEeccCCc-cCCCcccccccc----cccceeeccCcc-ccCCCCcccccccc
Q 039595 486 SKLQFLDLSSNHIVGKIPVQLEKLFSLNKLILSLNQ-LSGSVPLEFGSL----TELQYLDLSANK-LSSSIPKSIGNLLK 559 (1078)
Q Consensus 486 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l----~~L~~L~Ls~N~-l~~~~~~~~~~l~~ 559 (1078)
..|+.||++++.|+...-..+.++++|+.|+|+++. |++..-..+..+ ++|++|+|++|. |++..-..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 457777777777765555555666666666666663 543322333332 245555555543 44333333444445
Q ss_pred cccccccCc
Q 039595 560 LYYLNLSNN 568 (1078)
Q Consensus 560 L~~L~Ls~N 568 (1078)
|++|+|+++
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 555555544
No 425
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.70 E-value=0.00014 Score=81.96 Aligned_cols=83 Identities=4% Similarity=-0.040 Sum_probs=53.9
Q ss_pred ccee-ccCCceeEEEEEeC-------CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCC-C--CceeeEEeeeecC-
Q 039595 756 KFCI-GKGGQGSVYKAELP-------SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIR-H--RNIVKFHGFCSNA- 823 (1078)
Q Consensus 756 ~~~l-G~G~~g~V~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h--~niv~l~~~~~~~- 823 (1078)
.+.| +.|....+|+.... +++.+++|+........ ......+..|+.+++.+. + -.+.+++.++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~-~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~ 103 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVP-VFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGD 103 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCC-SSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSST
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccc-cCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCC
Confidence 4567 88999999998654 26688999865432000 000123566777777663 2 3577788877655
Q ss_pred --CeeEEEEeecCCCCHH
Q 039595 824 --RHSFLVCEYLHRGSLA 839 (1078)
Q Consensus 824 --~~~~lv~E~~~~g~L~ 839 (1078)
+..++||||++|..+.
T Consensus 104 ~~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 104 VLGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TTSSCEEEEECCCCBCCC
T ss_pred ccCCceEEEEecCCCChh
Confidence 4578999999987654
No 426
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.68 E-value=0.00011 Score=84.12 Aligned_cols=79 Identities=14% Similarity=-0.064 Sum_probs=49.1
Q ss_pred cceeccCCceeEEEEEeC-CCCEEEEEEeccccc-c--CChhhHHHHHHHHHHHhcCCC--C-ceeeEEeeeecCCeeEE
Q 039595 756 KFCIGKGGQGSVYKAELP-SGDIVAVKKFNSQLL-S--GNMADQDEFLNVVLALNEIRH--R-NIVKFHGFCSNARHSFL 828 (1078)
Q Consensus 756 ~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~--~~~~~~~~~~~e~~~l~~l~h--~-niv~l~~~~~~~~~~~l 828 (1078)
.+.+|.|.++.||++... +++.|+||....... . ......+.+..|.++++.+.. | .+.+++.+. ....++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CCccEE
Confidence 467999999999999654 468899998654221 0 001123445667777776632 3 445666543 345689
Q ss_pred EEeecCCC
Q 039595 829 VCEYLHRG 836 (1078)
Q Consensus 829 v~E~~~~g 836 (1078)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999774
No 427
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.62 E-value=8.5e-05 Score=83.04 Aligned_cols=140 Identities=18% Similarity=0.242 Sum_probs=77.6
Q ss_pred ceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcC-----CCCceeeEE-e--eeecCCeeEE
Q 039595 757 FCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEI-----RHRNIVKFH-G--FCSNARHSFL 828 (1078)
Q Consensus 757 ~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~l~-~--~~~~~~~~~l 828 (1078)
+.|+.|..+.||++...+| .+++|+.... ...+..|..+++.+ ..|.++... | +...++..++
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~--------~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~ 108 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP--------EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFV 108 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC--------HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC--------HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEE
Confidence 4566678899999977654 5899988642 12223344444333 234433311 1 1234667899
Q ss_pred EEeecCCCCHH-----------HH---hcC---CC--CC------CcCCHHH----------------------------
Q 039595 829 VCEYLHRGSLA-----------RI---LGN---DA--TA------KELSWNR---------------------------- 855 (1078)
Q Consensus 829 v~E~~~~g~L~-----------~~---l~~---~~--~~------~~l~~~~---------------------------- 855 (1078)
||||++|..+. +. ++. .. .. ....|..
T Consensus 109 l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 188 (346)
T 2q83_A 109 VYDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLY 188 (346)
T ss_dssp EEECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHH
T ss_pred EEEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHH
Confidence 99999986542 11 111 00 00 0012211
Q ss_pred ---HHHHHHHHHHHHHHHHh----------cCCCCcEecCCCCCCeeeCCCCcEEEecccccc
Q 039595 856 ---RINVIKGVANALSYLHH----------DCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAK 905 (1078)
Q Consensus 856 ---~~~i~~~i~~~L~~LH~----------~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~ 905 (1078)
...+..++..+++++++ ...+.++|||+++.||+++.++.+.|+||+.+.
T Consensus 189 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 189 LQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 01112234445666653 123489999999999999888899999999775
No 428
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.48 E-value=0.00056 Score=74.73 Aligned_cols=77 Identities=19% Similarity=0.145 Sum_probs=60.6
Q ss_pred CccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCC---CCceeeEEeeeecCCeeEEEE
Q 039595 754 DEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIR---HRNIVKFHGFCSNARHSFLVC 830 (1078)
Q Consensus 754 ~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv~ 830 (1078)
...+.|+.|....+|+... ++..+++|+.... ....+..|.+.++.+. ...+++++.+....+..++||
T Consensus 39 ~~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~-------~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvm 110 (312)
T 3jr1_A 39 KHKEKLYSGEMNEIWLIND-EVQTVFVKINERS-------YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLL 110 (312)
T ss_dssp CEEEEECCSSSSEEEEEES-SSCEEEEEEEEGG-------GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEE
T ss_pred eeeEEeCCccceeeeEEEE-CCCeEEEEeCCcc-------cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEE
Confidence 3456799999999999976 4678899986532 2556788888888773 356888999888888999999
Q ss_pred eecCCCCH
Q 039595 831 EYLHRGSL 838 (1078)
Q Consensus 831 E~~~~g~L 838 (1078)
||+++..+
T Consensus 111 e~l~G~~~ 118 (312)
T 3jr1_A 111 EALNKSKN 118 (312)
T ss_dssp ECCCCCCC
T ss_pred EeccCCCC
Confidence 99998764
No 429
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.34 E-value=0.00085 Score=77.20 Aligned_cols=77 Identities=14% Similarity=0.147 Sum_probs=47.5
Q ss_pred CCcEecCCCCCCeeeCCCCcEEEecccccccccCCCCCceeecc--ccccccccccccC---CCCccchhHHHHHHHHHH
Q 039595 876 PSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVEPYSSNRTEFVG--TFGYAAPEIAYTM---RATEKYDVYSFGVLVFEV 950 (1078)
Q Consensus 876 ~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~g--t~~y~aPE~~~~~---~~~~~sDvwSlG~il~el 950 (1078)
+.++|||+++.||+++.++ ++++||+.+..-...... ....+ ...|++|+..... ......++......+|+.
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dl-a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDI-GAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHH-HHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHH-HHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 4899999999999998877 999999998753321100 00011 1346666654321 112234555777777877
Q ss_pred HhCC
Q 039595 951 IKGN 954 (1078)
Q Consensus 951 ltG~ 954 (1078)
++++
T Consensus 310 y~~~ 313 (420)
T 2pyw_A 310 FNKR 313 (420)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7653
No 430
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.33 E-value=6.4e-05 Score=75.40 Aligned_cols=63 Identities=14% Similarity=0.173 Sum_probs=29.6
Q ss_pred CCcccEEeccCC-ccCCC----cccccccCccCcEEeccCCccCCC----cccccccccccceeeccCcccc
Q 039595 485 SSKLQFLDLSSN-HIVGK----IPVQLEKLFSLNKLILSLNQLSGS----VPLEFGSLTELQYLDLSANKLS 547 (1078)
Q Consensus 485 l~~L~~L~Ls~N-~i~~~----~~~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~ 547 (1078)
-+.|++|+|++| +|... +...+..-+.|+.|+|++|+|.+. +...+..-+.|+.|+|++|.|.
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 345666666653 55422 223333344555555555555422 2223333445555555555554
No 431
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.21 E-value=4.8e-05 Score=76.31 Aligned_cols=67 Identities=16% Similarity=0.145 Sum_probs=38.8
Q ss_pred cccCccCcEEeccCC-ccCCC----cccccccccccceeeccCccccCCCCcc----cccccccccccccCccccc
Q 039595 506 LEKLFSLNKLILSLN-QLSGS----VPLEFGSLTELQYLDLSANKLSSSIPKS----IGNLLKLYYLNLSNNQFSH 572 (1078)
Q Consensus 506 ~~~l~~L~~L~Ls~N-~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~----~~~l~~L~~L~Ls~N~l~~ 572 (1078)
+.+-+.|++|+|++| +|... +...+..-+.|+.|+|++|.|.+..... +..-+.|++|+|++|+|+.
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~ 112 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTP 112 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCH
Confidence 344457777787774 66532 2334555566777777777776433322 3344566666666666654
No 432
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.18 E-value=0.00065 Score=73.72 Aligned_cols=80 Identities=18% Similarity=0.208 Sum_probs=56.6
Q ss_pred cCCCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCC-C--CceeeEEeeeecCCeeE
Q 039595 751 DDFDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIR-H--RNIVKFHGFCSNARHSF 827 (1078)
Q Consensus 751 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h--~niv~l~~~~~~~~~~~ 827 (1078)
.+..-++.+|.|..+.||+.+..+|+.|++|+-.... ......|..|...++.+. . --+.+++++. ..+
T Consensus 15 ~~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~----~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~ 86 (288)
T 3f7w_A 15 REVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDA----PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRT 86 (288)
T ss_dssp CCEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTC----CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTE
T ss_pred CCeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCC----cchhhHHHHHHHHHHHHHhhCCCCcceEEecc----Cce
Confidence 3455677899999999999999999999999865432 222345778888888773 2 2345555542 347
Q ss_pred EEEeecCCCCH
Q 039595 828 LVCEYLHRGSL 838 (1078)
Q Consensus 828 lv~E~~~~g~L 838 (1078)
+||||++++..
T Consensus 87 lv~e~l~~~~~ 97 (288)
T 3f7w_A 87 LAMEWVDERPP 97 (288)
T ss_dssp EEEECCCCCCC
T ss_pred EEEEeecccCC
Confidence 89999987653
No 433
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.98 E-value=0.00092 Score=62.65 Aligned_cols=60 Identities=18% Similarity=0.251 Sum_probs=42.6
Q ss_pred CeeecCCCccC-CcCCCCcccccccceeeccCccccCCcccccccCCcCcEEEcccCcCCCCC
Q 039595 585 SKLDLSHNILQ-EEIPPQVCNMESLEKLNLSHNNLSGFIPRCFEKMRSLSCIDICYNELQGPI 646 (1078)
Q Consensus 585 ~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~l~l~~N~l~~~~ 646 (1078)
..++.+++.|+ ..+|..+ .++|++|+|++|+|+.+.+..|..+++|+.|+|++|+|.+..
T Consensus 11 ~~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC 71 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDC 71 (130)
T ss_dssp TEEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSG
T ss_pred CEEEeCCCCCccccCCCCC--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccC
Confidence 36777777775 2345433 236788888888888777777888888888888888887643
No 434
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.87 E-value=0.0079 Score=66.36 Aligned_cols=158 Identities=13% Similarity=0.125 Sum_probs=88.0
Q ss_pred ccHHHHHHhhcCCCc-----cceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCC--ce
Q 039595 741 IMHEEIIKATDDFDE-----KFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHR--NI 813 (1078)
Q Consensus 741 ~~~~~~~~~~~~~~~-----~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~--ni 813 (1078)
.+.+++......|.. ...++ |....||++...+|+.+++|+..... ...+.+..|..+++.+... .+
T Consensus 11 l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-----~~~~~~~~E~~~~~~L~~~g~~v 84 (328)
T 1zyl_A 11 LHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER-----WTADQILEEHQFALQLVNDEVPV 84 (328)
T ss_dssp CCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT-----SCHHHHHHHHHHHHHHHHTTCSB
T ss_pred CCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCC-----CCHHHHHHHHHHHHHHHHcCCee
Confidence 455666655554432 34566 88889999877777789999986321 1234555677766665321 23
Q ss_pred eeEEee-----eecCCeeEEEEeecCCCCHH-----------HHh---c----CCC--CCCcCCHHHH----HHH-----
Q 039595 814 VKFHGF-----CSNARHSFLVCEYLHRGSLA-----------RIL---G----NDA--TAKELSWNRR----INV----- 859 (1078)
Q Consensus 814 v~l~~~-----~~~~~~~~lv~E~~~~g~L~-----------~~l---~----~~~--~~~~l~~~~~----~~i----- 859 (1078)
++++.. ...++..++||||++|..+. +.+ + ... .....++... ..+
T Consensus 85 p~~~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 164 (328)
T 1zyl_A 85 AAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDAT 164 (328)
T ss_dssp CCCCCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCS
T ss_pred cceeecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcC
Confidence 444432 12345668899999875431 111 1 000 0111222211 001
Q ss_pred ----------HHHHHHHHHHHHhc----CCCCcEecCCCCCCeeeCCCCcEEEeccccccc
Q 039595 860 ----------IKGVANALSYLHHD----CLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKF 906 (1078)
Q Consensus 860 ----------~~~i~~~L~~LH~~----~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~ 906 (1078)
...+...++.+... ....++|||+++.||+++ + .+.++||+.+..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 165 LIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp SSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 11111223333221 223688999999999999 4 899999988753
No 435
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.78 E-value=0.0026 Score=70.57 Aligned_cols=31 Identities=35% Similarity=0.416 Sum_probs=27.3
Q ss_pred CCcEecCCCCCCeeeCCC----CcEEEeccccccc
Q 039595 876 PSIIHRDISSKNVLLDLE----FEAHVSDFGIAKF 906 (1078)
Q Consensus 876 ~~ivH~Dlk~~NIll~~~----~~~kl~DfG~a~~ 906 (1078)
+.++|||+.+.||+++.+ +.+.|+||+.+..
T Consensus 183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 479999999999999875 6899999998864
No 436
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.61 E-value=0.022 Score=62.55 Aligned_cols=158 Identities=13% Similarity=0.161 Sum_probs=85.8
Q ss_pred ccHHHHHHhhcCCCc-----cceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCc--e
Q 039595 741 IMHEEIIKATDDFDE-----KFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRN--I 813 (1078)
Q Consensus 741 ~~~~~~~~~~~~~~~-----~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--i 813 (1078)
++.+++.....+|.. .+.|+.|....+|+....+| .+++|+..... ..+.+..|..+++.+.... +
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~------~~~~l~~e~~~l~~L~~~g~~v 79 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV------EKNDLPFFLGLMQHLAAKGLSC 79 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC---------CCHHHHHHHHHHHHHHTTCCC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC------CHHHHHHHHHHHHHHHHCCCCC
Confidence 455666666666654 34577788899999977655 68899876521 1123344555555542111 2
Q ss_pred eeEEee------eecCCeeEEEEeecCCCCHHH-----------H---hcC---CCCCC---cC---CHHHHHH------
Q 039595 814 VKFHGF------CSNARHSFLVCEYLHRGSLAR-----------I---LGN---DATAK---EL---SWNRRIN------ 858 (1078)
Q Consensus 814 v~l~~~------~~~~~~~~lv~E~~~~g~L~~-----------~---l~~---~~~~~---~l---~~~~~~~------ 858 (1078)
.+++.. ....+..+++++|++|..+.. . ++. ..... .. .|.....
T Consensus 80 P~~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 159 (322)
T 2ppq_A 80 PLPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERA 159 (322)
T ss_dssp CCBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGG
T ss_pred CcccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHH
Confidence 333321 123456789999999865311 0 111 00000 01 1211100
Q ss_pred ------HHHHHHHHHHHHHhc----CCCCcEecCCCCCCeeeCCCCcEEEecccccc
Q 039595 859 ------VIKGVANALSYLHHD----CLPSIIHRDISSKNVLLDLEFEAHVSDFGIAK 905 (1078)
Q Consensus 859 ------i~~~i~~~L~~LH~~----~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~ 905 (1078)
+...+...++++++. ...+++|+|+.+.||+++.++.+.++||+.+.
T Consensus 160 ~~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 160 DEVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp GGTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred HhhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 011234455555532 12478999999999999887667899998775
No 437
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.44 E-value=0.0055 Score=66.80 Aligned_cols=74 Identities=11% Similarity=0.112 Sum_probs=43.1
Q ss_pred CCccceeccCCceeEEEEEeCCCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCce-eeEEeeeecCCeeEEEEe
Q 039595 753 FDEKFCIGKGGQGSVYKAELPSGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRNI-VKFHGFCSNARHSFLVCE 831 (1078)
Q Consensus 753 ~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~E 831 (1078)
+.-.+.|+.|....+|++ +.+++|+..... . ...+ ..+|..+++.+...++ .++++++. +.-++|+|
T Consensus 20 ~~~i~~l~gG~tN~~~~~-----~~~vlR~~~~~~-~-~~~~---r~~E~~~l~~l~~~g~~P~~~~~~~--~~~~~v~e 87 (301)
T 3dxq_A 20 YTGPLERLGGLTNLVFRA-----GDLCLRIPGKGT-E-EYIN---RANEAVAAREAAKAGVSPEVLHVDP--ATGVMVTR 87 (301)
T ss_dssp CCSCEEEESCSSEEEEEE-----TTEEEEEECC------CCC---HHHHHHHHHHHHHTTSSCCEEEECT--TTCCEEEE
T ss_pred ccceeEcCCcccccccee-----eeEEEECCCCCc-c-ceeC---HHHHHHHHHHHHHcCCCCceEEEEC--CCCEEEEe
Confidence 333678999999999998 558888875421 1 0111 2345555555532222 45665543 33478999
Q ss_pred ec-CCCCH
Q 039595 832 YL-HRGSL 838 (1078)
Q Consensus 832 ~~-~~g~L 838 (1078)
|+ +|.++
T Consensus 88 ~i~~g~~l 95 (301)
T 3dxq_A 88 YIAGAQTM 95 (301)
T ss_dssp CCTTCEEC
T ss_pred ecCCCccC
Confidence 99 55443
No 438
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.31 E-value=0.0047 Score=57.78 Aligned_cols=55 Identities=31% Similarity=0.344 Sum_probs=24.5
Q ss_pred EEEccCCCCC-CCCCCcccccCCCCeeecCCcccCCCCCCcccCCCCCcEEecccccc
Q 039595 202 LLYLNNNSLF-GYIPTVMGNLKSLSTLDLSQNQLNGLIPCTLDNLSNLDTLFLYKNSL 258 (1078)
Q Consensus 202 ~L~L~~n~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l 258 (1078)
.++.+++.++ ..+|..+. ++|++|+|++|+|+.+.+..|..+++|++|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 4555555553 23343221 2344555555555444444444444444444444433
No 439
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.30 E-value=0.0044 Score=71.14 Aligned_cols=73 Identities=15% Similarity=0.172 Sum_probs=48.4
Q ss_pred cceeccCCceeEEEEEeCC--------CCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCc-eeeEEeeeecCCee
Q 039595 756 KFCIGKGGQGSVYKAELPS--------GDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRN-IVKFHGFCSNARHS 826 (1078)
Q Consensus 756 ~~~lG~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~ 826 (1078)
.+.|+.|....||++...+ ++.|++|+..... ..+.+..|..+++.+...+ ..++++.+.+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~------~~~~li~E~~~l~~L~~~g~~P~l~~~~~~---- 147 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE------TESHLVAESVIFTLLSERHLGPKLYGIFSG---- 147 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC------CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC------cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----
Confidence 4568889999999997653 5789999874311 1134456887777774223 3667776653
Q ss_pred EEEEeecCCCCH
Q 039595 827 FLVCEYLHRGSL 838 (1078)
Q Consensus 827 ~lv~E~~~~g~L 838 (1078)
.+|+||++|.++
T Consensus 148 g~v~e~l~G~~l 159 (429)
T 1nw1_A 148 GRLEEYIPSRPL 159 (429)
T ss_dssp EEEECCCCEEEC
T ss_pred CEEEEEeCCccc
Confidence 389999986443
No 440
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.08 E-value=0.016 Score=64.91 Aligned_cols=141 Identities=15% Similarity=0.197 Sum_probs=82.4
Q ss_pred cceeccCCceeEEEEEeC--------CCCEEEEEEeccccccCChhhHHHHHHHHHHHhcCC-CCceeeEEeeeecCCee
Q 039595 756 KFCIGKGGQGSVYKAELP--------SGDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIR-HRNIVKFHGFCSNARHS 826 (1078)
Q Consensus 756 ~~~lG~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~ 826 (1078)
.+.+..|....+|++... +++.|++|+.... ........+|..+++.+. +.-..++++++.+
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-----~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~---- 125 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-----LQGVDSLVLESVMFAILAERSLGPQLYGVFPE---- 125 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC--------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-----cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----
Confidence 356777889999999764 2478999985321 122445567888887773 3334667777654
Q ss_pred EEEEeecCCCCHHH--------------H---hcCCC--CCCcCC--HHHHHHHHHHHHH-------------------H
Q 039595 827 FLVCEYLHRGSLAR--------------I---LGNDA--TAKELS--WNRRINVIKGVAN-------------------A 866 (1078)
Q Consensus 827 ~lv~E~~~~g~L~~--------------~---l~~~~--~~~~l~--~~~~~~i~~~i~~-------------------~ 866 (1078)
.+||||++|..+.. . ++... -.+... +.++.++..++.. .
T Consensus 126 g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~ 205 (379)
T 3feg_A 126 GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDE 205 (379)
T ss_dssp EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHH
T ss_pred ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHH
Confidence 28999999865431 0 11111 111222 3455555544422 2
Q ss_pred HHHHHh----c-CCCCcEecCCCCCCeeeCCC----CcEEEecccccc
Q 039595 867 LSYLHH----D-CLPSIIHRDISSKNVLLDLE----FEAHVSDFGIAK 905 (1078)
Q Consensus 867 L~~LH~----~-~~~~ivH~Dlk~~NIll~~~----~~~kl~DfG~a~ 905 (1078)
+..|.+ . ....++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 206 ~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 206 MGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 333322 1 12368999999999999876 789999998875
No 441
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=95.89 E-value=0.02 Score=66.07 Aligned_cols=74 Identities=14% Similarity=0.048 Sum_probs=45.9
Q ss_pred cceeccCCceeEEEEEeCC-CCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCc-eeeEEeeeecCCeeEEEEeec
Q 039595 756 KFCIGKGGQGSVYKAELPS-GDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRN-IVKFHGFCSNARHSFLVCEYL 833 (1078)
Q Consensus 756 ~~~lG~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~E~~ 833 (1078)
.+.|+.|-...+|++...+ +..|++|+..... . ...+ -..|..+++.+...+ ..++++++.. .+|+||+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~-~-~~id---R~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~e~I 183 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKT-D-EIIN---REREKKISCILYNKNIAKKIYVFFTN----GRIEEFM 183 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-C-C-SCSC---HHHHHHHHHHHTTSSSBCCEEEEETT----EEEEECC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCCh-h-hhcC---HHHHHHHHHHHHhcCCCCCEEEEeCC----eEEEEee
Confidence 4568889999999998764 4788899874321 1 1111 145777777775333 3577777642 2599999
Q ss_pred CCCCH
Q 039595 834 HRGSL 838 (1078)
Q Consensus 834 ~~g~L 838 (1078)
+|.++
T Consensus 184 ~G~~l 188 (458)
T 2qg7_A 184 DGYAL 188 (458)
T ss_dssp CSEEC
T ss_pred CCccC
Confidence 87544
No 442
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.77 E-value=0.058 Score=59.66 Aligned_cols=31 Identities=26% Similarity=0.290 Sum_probs=27.7
Q ss_pred CCcEecCCCCCCeeeCCCCcEEEeccccccc
Q 039595 876 PSIIHRDISSKNVLLDLEFEAHVSDFGIAKF 906 (1078)
Q Consensus 876 ~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~ 906 (1078)
..++|+|+.+.||+++.++.+.++||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 3689999999999999888999999988764
No 443
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=95.59 E-value=0.05 Score=54.70 Aligned_cols=103 Identities=15% Similarity=0.116 Sum_probs=66.8
Q ss_pred CCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccccccCCCCCce
Q 039595 836 GSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAKFVEPYSSNRT 915 (1078)
Q Consensus 836 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 915 (1078)
-+|.++|+. ...+++++++|.++.|.+.+|.-.-.+. .-..+=+.|..|++..+|.|...+ +.+.
T Consensus 33 vSL~eIL~~--~~~PlsEEqaWALc~Qc~~~L~~~~~~~--~~~~~i~~~~~i~l~~dG~V~f~~-~~s~---------- 97 (229)
T 2yle_A 33 LSLEEILRL--YNQPINEEQAWAVCYQCCGSLRAAARRR--QPRHRVRSAAQIRVWRDGAVTLAP-AADD---------- 97 (229)
T ss_dssp EEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCSGGGEEEETTSCEEECC-C-------------
T ss_pred ccHHHHHHH--cCCCcCHHHHHHHHHHHHHHHHhhhhcc--cCCceecCCcceEEecCCceeccc-cccc----------
Confidence 378888853 3568999999999999999987762211 111223457899999999998764 1111
Q ss_pred eeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCC
Q 039595 916 EFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHP 956 (1078)
Q Consensus 916 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p 956 (1078)
.....+.|||... ...+.+.=|||+|+++|.-+--..|
T Consensus 98 --~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 --AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp -----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred --ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1122466888753 3557788999999999999864444
No 444
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=95.58 E-value=0.01 Score=66.77 Aligned_cols=74 Identities=9% Similarity=0.058 Sum_probs=41.7
Q ss_pred cceeccCCceeEEEEEeCC---------CCEEEEEEeccccccCChhhHHHHHHHHHHHhcCCCCc-eeeEEeeeecCCe
Q 039595 756 KFCIGKGGQGSVYKAELPS---------GDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIRHRN-IVKFHGFCSNARH 825 (1078)
Q Consensus 756 ~~~lG~G~~g~V~~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~ 825 (1078)
.+.++.|....+|++...+ ++.+++|+...... .......|..+++.+...+ +.++++.+.
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-----~~~~~~~E~~~l~~L~~~g~~P~~~~~~~---- 108 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-----ELYNTISEFEVYKTMSKYKIAPQLLNTFN---- 108 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-----GTSCHHHHHHHHHHHHHTTSSCCEEEEET----
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-----ceecHHHHHHHHHHHHhcCCCCceEEecC----
Confidence 3467888889999997653 26888888654211 1111245666666653222 446665542
Q ss_pred eEEEEeecCCCCH
Q 039595 826 SFLVCEYLHRGSL 838 (1078)
Q Consensus 826 ~~lv~E~~~~g~L 838 (1078)
-++||||++|..+
T Consensus 109 ~~~v~e~i~G~~l 121 (369)
T 3c5i_A 109 GGRIEEWLYGDPL 121 (369)
T ss_dssp TEEEEECCCSEEC
T ss_pred CcEEEEEecCCcC
Confidence 2689999987543
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=94.84 E-value=0.062 Score=60.44 Aligned_cols=145 Identities=16% Similarity=0.181 Sum_probs=82.1
Q ss_pred ceeccCCceeEEEEEeCC--------CCEEEEEEecccccc-------CChhhH-------HHHHHHHHHHhcCC-CCce
Q 039595 757 FCIGKGGQGSVYKAELPS--------GDIVAVKKFNSQLLS-------GNMADQ-------DEFLNVVLALNEIR-HRNI 813 (1078)
Q Consensus 757 ~~lG~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~-------~~~~~~-------~~~~~e~~~l~~l~-h~ni 813 (1078)
+.|..|-...+|++..++ ++.|.+++.-..... ....++ +....|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456678889999997653 367888886432100 000111 12234777777763 4446
Q ss_pred eeEEeeeecCCeeEEEEeecCCCCHHH--H---------------hcCC--CCCCcCC--HHHHHHHHHHHH--------
Q 039595 814 VKFHGFCSNARHSFLVCEYLHRGSLAR--I---------------LGND--ATAKELS--WNRRINVIKGVA-------- 864 (1078)
Q Consensus 814 v~l~~~~~~~~~~~lv~E~~~~g~L~~--~---------------l~~~--~~~~~l~--~~~~~~i~~~i~-------- 864 (1078)
.++++++..+ +|+||++|-+|.. + ++.. .-.+... +..+.++..++.
T Consensus 138 Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 6778777542 8999999755421 1 0111 1111222 234444443321
Q ss_pred --------------HHHHH----HHhc-CCCCcEecCCCCCCeeeCCC------CcEEEecccccc
Q 039595 865 --------------NALSY----LHHD-CLPSIIHRDISSKNVLLDLE------FEAHVSDFGIAK 905 (1078)
Q Consensus 865 --------------~~L~~----LH~~-~~~~ivH~Dlk~~NIll~~~------~~~kl~DfG~a~ 905 (1078)
..+.. +... ....++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 11222 2221 22368899999999999877 789999998775
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=92.86 E-value=0.12 Score=58.56 Aligned_cols=74 Identities=7% Similarity=0.003 Sum_probs=45.9
Q ss_pred cceeccCCceeEEEEEeCC--------CCEEEEEEeccccccCChhhHHHHHHHHHHHhcCC-CCceeeEEeeeecCCee
Q 039595 756 KFCIGKGGQGSVYKAELPS--------GDIVAVKKFNSQLLSGNMADQDEFLNVVLALNEIR-HRNIVKFHGFCSNARHS 826 (1078)
Q Consensus 756 ~~~lG~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~ 826 (1078)
++.+..|....+|+....+ ++.|++|+..... . ...+ ..+|..+++.+. +.-..++++.+. -
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~-~~id---R~~E~~~l~~L~~~gi~P~l~~~~~----~ 145 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-G-KFYD---SKVELDVFRYLSNINIAPNIIADFP----E 145 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC---CCCC---HHHHHHHHHHHHHTTSSCCEEEEET----T
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-c-hhcC---HHHHHHHHHHHHhcCCCCCEEEEcC----C
Confidence 4567788899999997653 5789999864321 1 1111 234666666553 222456665443 2
Q ss_pred EEEEeecCCCCH
Q 039595 827 FLVCEYLHRGSL 838 (1078)
Q Consensus 827 ~lv~E~~~~g~L 838 (1078)
++|+||++|..+
T Consensus 146 ~~I~efI~G~~l 157 (424)
T 3mes_A 146 GRIEEFIDGEPL 157 (424)
T ss_dssp EEEEECCCSEEC
T ss_pred CEEEEEeCCccC
Confidence 789999998654
No 447
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=89.77 E-value=0.076 Score=38.15 Aligned_cols=27 Identities=33% Similarity=0.666 Sum_probs=12.6
Q ss_pred eehhHHH-HHHHHHHHhhhcceeeeccc
Q 039595 690 IVFPILG-MVLLLISLIGFFFFFRQRKK 716 (1078)
Q Consensus 690 ii~~~~~-~~~lll~~i~~~~~~r~rk~ 716 (1078)
|+..+++ +++++++++++++++|+|++
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhhHh
Confidence 4444544 44444444444555555443
No 448
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=88.12 E-value=0.084 Score=37.78 Aligned_cols=27 Identities=22% Similarity=0.512 Sum_probs=12.2
Q ss_pred eehhHHH-HHHHHHHHhhhcceeeeccc
Q 039595 690 IVFPILG-MVLLLISLIGFFFFFRQRKK 716 (1078)
Q Consensus 690 ii~~~~~-~~~lll~~i~~~~~~r~rk~ 716 (1078)
|+..++| ++++++++.++++++|+|++
T Consensus 12 IA~gVVgGv~~v~ii~~~~~~~~RRRr~ 39 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGLTFAVYVRRKSI 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEEeehHHHHHHHHHHHHHHHHhhhhhh
Confidence 3444444 44444444444455554443
No 449
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=85.39 E-value=0.16 Score=36.24 Aligned_cols=26 Identities=19% Similarity=0.521 Sum_probs=12.2
Q ss_pred eehhHHHHHHHHHHHhhhcceeeecc
Q 039595 690 IVFPILGMVLLLISLIGFFFFFRQRK 715 (1078)
Q Consensus 690 ii~~~~~~~~lll~~i~~~~~~r~rk 715 (1078)
|++.++|+++++++.+++++|.|||+
T Consensus 14 Ia~~vVGvll~vi~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 14 IISAVVGILLVVVLGVVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHHHHHhheehhh
Confidence 45555554444444444444444444
No 450
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=83.97 E-value=1.8 Score=48.80 Aligned_cols=29 Identities=24% Similarity=0.339 Sum_probs=24.7
Q ss_pred CcEecCCCCCCeee------CCCCcEEEecccccc
Q 039595 877 SIIHRDISSKNVLL------DLEFEAHVSDFGIAK 905 (1078)
Q Consensus 877 ~ivH~Dlk~~NIll------~~~~~~kl~DfG~a~ 905 (1078)
.++|+|+.+.||++ ++++.+.++||-+|.
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 35799999999999 456789999998876
No 451
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=82.83 E-value=1.9 Score=43.35 Aligned_cols=117 Identities=9% Similarity=0.062 Sum_probs=79.8
Q ss_pred CCCCceeeEEeeeecCCeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCC
Q 039595 808 IRHRNIVKFHGFCSNARHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALSYLHHDCLPSIIHRDISSKN 887 (1078)
Q Consensus 808 l~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~N 887 (1078)
..||+.++. .+-++.+.+.+.++.-+.+ ..+- .-+..+..++++++.+|+....++++. +|--++|+|
T Consensus 42 ~~~~~Fl~~-~I~e~eD~v~~~y~~~~~~--~~f~----~ik~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~N 109 (215)
T 4ann_A 42 QHSPYFIDA-ELTELRDSFQIHYDINDNH--TPFD----NIKSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDE 109 (215)
T ss_dssp SCCTTBCCE-EEEECSSEEEEEECCCTTS--EEGG----GGGGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGG
T ss_pred ccCCcccce-EEEEcccEEEEEEEcCccc--CCHH----HHHhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecce
Confidence 368888876 5666667666666654432 2221 234578899999999999988666644 788999999
Q ss_pred eeeCCCCcEEEecccccccccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCC
Q 039595 888 VLLDLEFEAHVSDFGIAKFVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRD 958 (1078)
Q Consensus 888 Ill~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~ 958 (1078)
++++.++.+++.-.|+-..+. |. ..+...=.-.+=|++..+++++..|+
T Consensus 110 L~f~~~~~p~i~~RGik~~l~-----------------P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 110 LFFTRDGLPIAKTRGLQNVVD-----------------PL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EEECTTSCEEESCCEETTTBS-----------------CC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEEcCCCCEEEEEccCccCCC-----------------CC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999999887654332 22 11111223345678888999988854
No 452
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=82.68 E-value=2.5 Score=42.52 Aligned_cols=115 Identities=10% Similarity=0.069 Sum_probs=77.3
Q ss_pred CCCceeeEEeeeecCCeeEEEEeecCCCCHHHHhcCCCCCCcCCHHHHHHHHHHHHHHHH-HHHhcCCCCcEecCCCCCC
Q 039595 809 RHRNIVKFHGFCSNARHSFLVCEYLHRGSLARILGNDATAKELSWNRRINVIKGVANALS-YLHHDCLPSIIHRDISSKN 887 (1078)
Q Consensus 809 ~h~niv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~-~LH~~~~~~ivH~Dlk~~N 887 (1078)
.||++ -..+-.+++.+.+.++.-+++.=+..+ ...+..++++++.+|+.... +++. -+|--++|+|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i------~~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~N 114 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI------RKTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPEN 114 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH------HTSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH------HhcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCce
Confidence 68888 444446777777777766454323333 34778999999999888776 5554 4788899999
Q ss_pred eeeCCCCcEEEecccccccccCCCCCceeeccccccccccccccCCCCccchhHHHHHHHHHHHhCCCCCC
Q 039595 888 VLLDLEFEAHVSDFGIAKFVEPYSSNRTEFVGTFGYAAPEIAYTMRATEKYDVYSFGVLVFEVIKGNHPRD 958 (1078)
Q Consensus 888 Ill~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG~il~elltG~~p~~ 958 (1078)
++++.++.+++.-.|+-..+ +|..+ +..-=.-.+=|++..++.++..|+
T Consensus 115 L~f~~~~~p~i~hRGi~~~l-----------------pP~e~-----~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 115 LMFNRALEPFFLHVGVKESL-----------------PPDEW-----DDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp EEECTTCCEEESCCEETTTB-----------------SSCSC-----CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred EEEeCCCcEEEEEcCCcccC-----------------CCCCC-----CHHHHHHHHHHHHHHHHcCCCCHH
Confidence 99999999999988765432 23221 111112245577788888887743
No 453
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=74.39 E-value=0.99 Score=32.07 Aligned_cols=24 Identities=38% Similarity=0.375 Sum_probs=9.8
Q ss_pred ehhHHHHHHHHHHHhhhcceeeec
Q 039595 691 VFPILGMVLLLISLIGFFFFFRQR 714 (1078)
Q Consensus 691 i~~~~~~~~lll~~i~~~~~~r~r 714 (1078)
+.++.|+++++++++++++++|||
T Consensus 17 ~~vv~Gv~ll~~iv~~~~~~~rRr 40 (41)
T 2k9y_A 17 GGVAVGVVLLLVLAGVGFFIHRRR 40 (41)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSSSC
T ss_pred eehhHHHHHHHHHHHHheeEeeec
Confidence 333344444332444444444443
No 454
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=66.64 E-value=0.68 Score=53.26 Aligned_cols=62 Identities=10% Similarity=-0.036 Sum_probs=17.3
Q ss_pred ccceeccCCceeEEEEEeCC-CCEEEE------EEeccccccCChhhHHHHHHHHHHHhcCCCCceeeEEeeee
Q 039595 755 EKFCIGKGGQGSVYKAELPS-GDIVAV------KKFNSQLLSGNMADQDEFLNVVLALNEIRHRNIVKFHGFCS 821 (1078)
Q Consensus 755 ~~~~lG~G~~g~V~~~~~~~-~~~vav------K~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 821 (1078)
+.+.+| ||.||+|.+.. ..+||| |..+..... .+....+.+|..+++..+|||+++.+++..
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~--~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVS--EKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-------------------------------------CBCCCEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCcccccccccc--ccccccccccccccccccccccCCCcceEE
Confidence 345566 99999997753 357888 665443221 223446788888899999999999988753
No 455
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=63.48 E-value=1.7 Score=29.31 Aligned_cols=25 Identities=24% Similarity=0.548 Sum_probs=11.4
Q ss_pred eehhHHHHHHHHHHHhhhcceeeec
Q 039595 690 IVFPILGMVLLLISLIGFFFFFRQR 714 (1078)
Q Consensus 690 ii~~~~~~~~lll~~i~~~~~~r~r 714 (1078)
|++.++|+++++++...+.++.|||
T Consensus 10 IaagVvglll~vii~l~~~~~iRRr 34 (35)
T 1iij_A 10 IIATVVGVLLFLILVVVVGILIKRR 34 (35)
T ss_dssp HHHHHHHHHHHHHHTTTTTHHHHHC
T ss_pred eHHHHHHHHHHHHHHHHhheEEeec
Confidence 4555555333333334444444444
No 456
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=61.94 E-value=1.4 Score=33.02 Aligned_cols=18 Identities=22% Similarity=0.794 Sum_probs=8.9
Q ss_pred eeEEeehhHHHHHHHHHH
Q 039595 686 KWIVIVFPILGMVLLLIS 703 (1078)
Q Consensus 686 ~~~~ii~~~~~~~~lll~ 703 (1078)
.|++++++++|.+++.++
T Consensus 9 ~WiIi~svl~GLLLL~Li 26 (54)
T 2l8s_A 9 LWVILLSAFAGLLLLMLL 26 (54)
T ss_dssp THHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 455555555555444333
No 457
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=55.69 E-value=1.9 Score=32.40 Aligned_cols=19 Identities=37% Similarity=0.536 Sum_probs=9.2
Q ss_pred ceeEEeehhHHHHHHHHHH
Q 039595 685 KKWIVIVFPILGMVLLLIS 703 (1078)
Q Consensus 685 ~~~~~ii~~~~~~~~lll~ 703 (1078)
+.|++++++++|++++.++
T Consensus 11 p~wiIi~svl~GLllL~li 29 (54)
T 2knc_A 11 PIWWVLVGVLGGLLLLTIL 29 (54)
T ss_dssp CHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHH
Confidence 3455555555555444333
No 458
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=52.52 E-value=4.4 Score=28.73 Aligned_cols=18 Identities=39% Similarity=0.604 Sum_probs=8.8
Q ss_pred ceeEEeehhHHHHHHHHH
Q 039595 685 KKWIVIVFPILGMVLLLI 702 (1078)
Q Consensus 685 ~~~~~ii~~~~~~~~lll 702 (1078)
+.|++++++++|.+++.+
T Consensus 9 p~wiIi~s~l~GLllL~l 26 (42)
T 2k1a_A 9 PIWWVLVGVLGGLLLLTI 26 (42)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHH
Confidence 345555555555544433
No 459
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=51.04 E-value=1.8 Score=28.46 Aligned_cols=28 Identities=29% Similarity=0.643 Sum_probs=17.5
Q ss_pred EEeehhHHHHHHHHHHHhhhcceeeecc
Q 039595 688 IVIVFPILGMVLLLISLIGFFFFFRQRK 715 (1078)
Q Consensus 688 ~~ii~~~~~~~~lll~~i~~~~~~r~rk 715 (1078)
.+.+.+++|.+++.+.+..-|.+||-|+
T Consensus 7 ~malt~i~gl~vif~~lg~tflywrgrr 34 (40)
T 2l9u_A 7 TMALTVIAGLVVIFMMLGGTFLYWRGRR 34 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCceeEEEcccc
Confidence 3445566666666666666677777664
No 460
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=43.79 E-value=6.9 Score=27.14 Aligned_cols=6 Identities=33% Similarity=0.407 Sum_probs=2.4
Q ss_pred cceeee
Q 039595 708 FFFFRQ 713 (1078)
Q Consensus 708 ~~~~r~ 713 (1078)
||++||
T Consensus 32 ~~~~rr 37 (38)
T 2k1k_A 32 VFRSRR 37 (38)
T ss_dssp HHHHCC
T ss_pred HHHeec
Confidence 344443
No 461
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=34.95 E-value=4.6e+02 Score=30.53 Aligned_cols=46 Identities=22% Similarity=0.182 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHH--HHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccc
Q 039595 853 WNRRINVIKGVAN--ALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAK 905 (1078)
Q Consensus 853 ~~~~~~i~~~i~~--~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~ 905 (1078)
++.+..++.++|- .+.|+=. =||=.++|||++.+|++.=+|||.+.
T Consensus 454 ~~a~~nF~~S~A~ySvv~YILG-------igDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 454 AEVMDTYVKSCAGYCVITYILG-------VGDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-------CCCCCTTSEEECTTSCEEECCCSSCT
T ss_pred HHHHHHHHHHHHHHhHhheeee-------ccCCCCcceeEcCCCCEeeeehHHhh
Confidence 4455556665543 3445443 25778999999999999999999985
No 462
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=33.97 E-value=4.4e+02 Score=31.31 Aligned_cols=25 Identities=28% Similarity=0.246 Sum_probs=23.2
Q ss_pred cCCCCCCeeeCCCCcEEEecccccc
Q 039595 881 RDISSKNVLLDLEFEAHVSDFGIAK 905 (1078)
Q Consensus 881 ~Dlk~~NIll~~~~~~kl~DfG~a~ 905 (1078)
||=.++|||++.+|.+.=+|||.+.
T Consensus 551 GDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 551 GDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred CCCCCcceEEeCCCCEEEEeehhhh
Confidence 6888999999999999999999875
No 463
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=33.72 E-value=56 Score=28.13 Aligned_cols=43 Identities=14% Similarity=0.171 Sum_probs=17.5
Q ss_pred ccccchhhccCCCCCcEecCCCCccCCccCccccCCCCCceecc
Q 039595 426 LVGKVYEAFGDHPNLTFLDLSQNNFDGKISFNWRNLPKLDTFIV 469 (1078)
Q Consensus 426 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l 469 (1078)
++.+...+|.++.+|+.+.+-.+ ++.+...+|.+..+|+.+.+
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~ 50 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLIL 50 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEE
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEE
Confidence 33344444444444444444332 33333344444444444433
No 464
>2l6w_A Beta-type platelet-derived growth factor receptor; transmembrane helix, receptor tyrosine kinase, heptad repeat membrane protein; NMR {Homo sapiens}
Probab=39.27 E-value=9.1 Score=26.28 Aligned_cols=17 Identities=29% Similarity=0.598 Sum_probs=7.9
Q ss_pred HHHHHHhhhcceeeecc
Q 039595 699 LLLISLIGFFFFFRQRK 715 (1078)
Q Consensus 699 ~lll~~i~~~~~~r~rk 715 (1078)
++++.+++.++.|+|+.
T Consensus 20 i~iisLIiLi~~w~qKP 36 (39)
T 2l6w_A 20 LTIISLIILIMLWQKKP 36 (39)
Confidence 33444444455555543
No 465
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=31.59 E-value=64 Score=27.75 Aligned_cols=44 Identities=16% Similarity=0.079 Sum_probs=20.4
Q ss_pred cccccchhhhcccccCeeecCCCccCCcCCCCcccccccceeecc
Q 039595 570 FSHTIPIEFEKLIHLSKLDLSHNILQEEIPPQVCNMESLEKLNLS 614 (1078)
Q Consensus 570 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 614 (1078)
++.+...+|.++.+|+.+.|-.+ ++......|.++.+|+.+.+.
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEEC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEc
Confidence 33344444555555555555443 333333445555555554443
No 466
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=21.22 E-value=35 Score=24.48 Aligned_cols=30 Identities=13% Similarity=0.057 Sum_probs=20.5
Q ss_pred EEeehhHHHHHHHHHHHhhhcceeeecccc
Q 039595 688 IVIVFPILGMVLLLISLIGFFFFFRQRKKD 717 (1078)
Q Consensus 688 ~~ii~~~~~~~~lll~~i~~~~~~r~rk~~ 717 (1078)
..++..+++++++++++..++..+++++|+
T Consensus 15 ~gVVgGv~~~~ii~~~~~~~~RRr~~~~kR 44 (44)
T 2ks1_B 15 TGMVGALLLLLVVALGIGLFMRRRHIVRKR 44 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCCSCC
T ss_pred eehhHHHHHHHHHHHHHHHHhhhhHhhccC
Confidence 334555777777777777777777776663
No 467
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=21.05 E-value=2.9e+02 Score=34.65 Aligned_cols=60 Identities=15% Similarity=0.168 Sum_probs=37.5
Q ss_pred CHHHHhcCCCCCCcCCHHHH-HHHHHHHHH--HHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEecccccc
Q 039595 837 SLARILGNDATAKELSWNRR-INVIKGVAN--ALSYLHHDCLPSIIHRDISSKNVLLDLEFEAHVSDFGIAK 905 (1078)
Q Consensus 837 ~L~~~l~~~~~~~~l~~~~~-~~i~~~i~~--~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG~a~ 905 (1078)
.|.+|++... ....+.++ ..+++++|- .+.|+=. =||=.++|||++.+|.+.=+|||.+.
T Consensus 899 ~L~~~f~~~~--~~~~~~~ar~nF~~S~A~ysvv~YiLg-------igDRH~~NILid~tG~v~HIDFG~~f 961 (1091)
T 3hhm_A 899 TLHQWLKDKN--KGEIYDAAIDLFTRSCAGYCVATFILG-------IGDRHNSNIMVKDDGQLFHIDFGHFL 961 (1091)
T ss_dssp HHHHHHHTTS--CTTSHHHHHHHHHHHHHHHHHHHHHHT-------CCCCCTTTEEEETTSCEEECCCCCCS
T ss_pred HHHHHHHhcC--ChHHHHHHHHHHHHHhhhhhheEEEEe-------ecCCCCcceEEeCCCCEEEEeehhhh
Confidence 3455553322 22344443 345555442 3444432 26778999999999999999999985
No 468
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=20.99 E-value=37 Score=24.29 Aligned_cols=28 Identities=11% Similarity=0.127 Sum_probs=19.1
Q ss_pred eehhHHHHHHHHHHHhhhcceeeecccc
Q 039595 690 IVFPILGMVLLLISLIGFFFFFRQRKKD 717 (1078)
Q Consensus 690 ii~~~~~~~~lll~~i~~~~~~r~rk~~ 717 (1078)
++..+++++++++++..++..+++++|+
T Consensus 16 VVgGv~~v~ii~~~~~~~~RRRr~~~kr 43 (44)
T 2l2t_A 16 VIGGLFILVIVGLTFAVYVRRKSIKKKR 43 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCSSCCC
T ss_pred ehHHHHHHHHHHHHHHHHhhhhhhhhcc
Confidence 4455777777777777777777766664
Done!