Query 039601
Match_columns 150
No_of_seqs 124 out of 660
Neff 4.6
Searched_HMMs 13730
Date Mon Mar 25 19:26:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039601.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/039601hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2bkfa1 d.15.2.2 (A:1-85) Next 51.8 9.3 0.00068 25.0 4.2 48 54-103 11-67 (85)
2 d1z3xa2 a.261.1.1 (A:88-235) G 49.9 0.48 3.5E-05 34.5 -3.0 29 44-73 118-146 (148)
3 d1y6ia2 a.261.1.1 (A:83-233) M 48.2 0.72 5.2E-05 33.6 -2.2 30 44-75 118-148 (151)
4 d1unda_ a.14.1.1 (A:) Advillin 48.0 2.3 0.00016 24.0 0.5 19 67-85 1-19 (36)
5 d1fc4a_ c.67.1.4 (A:) 2-amino- 35.0 21 0.0015 27.8 4.6 38 53-90 39-81 (401)
6 d2r85a1 c.30.1.8 (A:1-99) 5-fo 33.3 0.84 6.1E-05 31.3 -3.7 22 44-65 65-88 (99)
7 d1o51a_ d.58.5.4 (A:) Hypothet 29.7 24 0.0017 23.0 3.5 27 51-83 6-32 (102)
8 d2pbza1 c.30.1.8 (A:4-99) 5-fo 25.8 1.4 0.0001 29.9 -3.6 23 43-65 59-83 (96)
9 d1yu5x1 a.14.1.1 (X:10-76) Vil 25.6 8.2 0.00059 24.3 0.4 20 66-85 31-50 (67)
10 d2o35a1 a.293.1.1 (A:2-80) Hyp 25.0 5.6 0.00041 26.0 -0.5 34 97-132 12-46 (79)
11 d2al3a1 d.15.1.2 (A:10-85) Tet 24.0 33 0.0024 21.8 3.2 37 50-88 2-38 (76)
12 d1ujsa_ a.14.1.1 (A:) Actin-bi 20.8 11 0.00082 24.8 0.3 20 66-85 46-65 (88)
No 1
>d2bkfa1 d.15.2.2 (A:1-85) Next to BRCA1 gene 1 protein, NBR1 (KIAA0049) {Human (Homo sapiens) [TaxId: 9606]}
Probab=51.76 E-value=9.3 Score=24.95 Aligned_cols=48 Identities=8% Similarity=0.161 Sum_probs=34.9
Q ss_pred EeccceeEeecccCcCcHHHHHHHHHhHHhcCCC--------C-CCCeEecCcHHHHHH
Q 039601 54 HTTDQIRFVIPLKYLENNIIRELFRIAEDEFGMP--------G-SGPITLPCDAIVMKY 103 (150)
Q Consensus 54 yVGe~~RfvVp~~yLnhP~F~~LL~~aeEEfG~~--------~-~G~L~IPC~~~~Fe~ 103 (150)
|-||-.||.++.. +++.|.+|..+-+.-||.+ . +--++|.|++++=|.
T Consensus 11 f~~dt~RF~ls~~--~~~~~~~L~~~i~~rf~l~~~~lkY~Ddd~e~v~l~~d~dl~E~ 67 (85)
T d2bkfa1 11 FKNEIQSFLVSDP--ENTTWADIEAMVKVSFDLNTIQIKYLDEENEEVSINSQGEYEEA 67 (85)
T ss_dssp ETTEEEEEEESCG--GGCCHHHHHHHHHHHHTCSSEEEEEECTTSCEEEECSHHHHHHH
T ss_pred ECCceEEEEecCC--CCCcHHHHHHHHHHhcCcccceEEEEcCCCCEEEEecHHHHHHH
Confidence 4567899998633 4788999999999988852 2 334788998765443
No 2
>d1z3xa2 a.261.1.1 (A:88-235) GUN4-like protein Ycf53 {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=49.87 E-value=0.48 Score=34.47 Aligned_cols=29 Identities=14% Similarity=0.155 Sum_probs=18.6
Q ss_pred cCCCCCeEEEEeccceeEeecccCcCcHHH
Q 039601 44 STAEKGHFVVHTTDQIRFVIPLKYLENNII 73 (150)
Q Consensus 44 ~~vpkG~~~VyVGe~~RfvVp~~yLnhP~F 73 (150)
..+|+||+|+. +..+-+-|=-..|+||.|
T Consensus 118 l~AP~GHLP~~-~~lrg~~~~~~~l~h~a~ 146 (148)
T d1z3xa2 118 LSAPRGHLPLT-NQLRGVQVLNALLNHPAW 146 (148)
T ss_dssp TTSCTTCCSCC-CCTTCSHHHHHHHTCGGG
T ss_pred CCCCCCCCCcC-CccchHHHHHHHhcCccc
Confidence 35799999974 333333344457788765
No 3
>d1y6ia2 a.261.1.1 (A:83-233) Mg-chelatase cofactor Gun4 {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=48.17 E-value=0.72 Score=33.60 Aligned_cols=30 Identities=13% Similarity=0.257 Sum_probs=19.6
Q ss_pred cCCCCCeEEEEecc-ceeEeecccCcCcHHHHH
Q 039601 44 STAEKGHFVVHTTD-QIRFVIPLKYLENNIIRE 75 (150)
Q Consensus 44 ~~vpkG~~~VyVGe-~~RfvVp~~yLnhP~F~~ 75 (150)
..+|+||+|+...- +-| +--..|+||.|.+
T Consensus 118 l~AP~GHLP~~~~lrG~~--~~~~l~~h~~~~~ 148 (151)
T d1y6ia2 118 LSAPQGHLPLLNQLRGVR--VAESLYRHPVWSQ 148 (151)
T ss_dssp TTSCTTCCSCCCCTTCTH--HHHHHHTSTHHHH
T ss_pred CCCCCCCCCccchhhhHH--HHHHHHcCcchhh
Confidence 35799999986422 112 3334889999864
No 4
>d1unda_ a.14.1.1 (A:) Advillin {Human (Homo sapiens) [TaxId: 9606]}
Probab=48.04 E-value=2.3 Score=23.98 Aligned_cols=19 Identities=26% Similarity=0.546 Sum_probs=17.1
Q ss_pred CcCcHHHHHHHHHhHHhcC
Q 039601 67 YLENNIIRELFRIAEDEFG 85 (150)
Q Consensus 67 yLnhP~F~~LL~~aeEEfG 85 (150)
||+.-.|++++.++.+||-
T Consensus 1 yLsd~dF~~vFgmsr~eF~ 19 (36)
T d1unda_ 1 YLSEQDFVSVFGITRGQFA 19 (36)
T ss_dssp CCCHHHHHHHHSSCHHHHH
T ss_pred CCCHHHHHHHHCcCHHHHH
Confidence 7899999999999999973
No 5
>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {Escherichia coli [TaxId: 562]}
Probab=34.96 E-value=21 Score=27.76 Aligned_cols=38 Identities=13% Similarity=0.180 Sum_probs=28.3
Q ss_pred EEeccceeEe--ecccCcC---cHHHHHHHHHhHHhcCCCCCC
Q 039601 53 VHTTDQIRFV--IPLKYLE---NNIIRELFRIAEDEFGMPGSG 90 (150)
Q Consensus 53 VyVGe~~Rfv--Vp~~yLn---hP~F~~LL~~aeEEfG~~~~G 90 (150)
|.+.|+++|+ ..-+||+ ||.+++....+-+.||....+
T Consensus 39 v~~~dG~~~l~f~s~dYLGl~~hp~v~~a~~~a~~~~g~~~~~ 81 (401)
T d1fc4a_ 39 ITVADGSHVINFCANNYLGLANHPDLIAAAKAGMDSHGFGMAS 81 (401)
T ss_dssp EEBTTSCEEEECCCSCTTSCTTCHHHHHHHHHHHHHHCSCCCS
T ss_pred EEecCCCEEEEEEccccccccCCHHHHHHHHHHHHHhCCCccc
Confidence 3556777876 3446763 999999999999999976433
No 6
>d2r85a1 c.30.1.8 (A:1-99) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Pyrococcus furiosus [TaxId: 2261]}
Probab=33.32 E-value=0.84 Score=31.30 Aligned_cols=22 Identities=23% Similarity=0.433 Sum_probs=16.9
Q ss_pred cCCCCCeEEEEec-cc-eeEeecc
Q 039601 44 STAEKGHFVVHTT-DQ-IRFVIPL 65 (150)
Q Consensus 44 ~~vpkG~~~VyVG-e~-~RfvVp~ 65 (150)
.-||.|-|++|+| |+ +.|.||+
T Consensus 65 I~IPhgSfv~Y~G~d~ie~~~VP~ 88 (99)
T d2r85a1 65 VVVPTGSFVAHLGIELVENMKVPY 88 (99)
T ss_dssp EECCCTTHHHHHCHHHHHTCCSCB
T ss_pred EEecCCCEEEEEcHHHHhcCCCCc
Confidence 4689999999999 32 4488874
No 7
>d1o51a_ d.58.5.4 (A:) Hypothetical protein TM0021 {Thermotoga maritima [TaxId: 2336]}
Probab=29.74 E-value=24 Score=22.97 Aligned_cols=27 Identities=7% Similarity=0.055 Sum_probs=23.1
Q ss_pred EEEEeccceeEeecccCcCcHHHHHHHHHhHHh
Q 039601 51 FVVHTTDQIRFVIPLKYLENNIIRELFRIAEDE 83 (150)
Q Consensus 51 ~~VyVGe~~RfvVp~~yLnhP~F~~LL~~aeEE 83 (150)
+-+|+++..|+ =+.|+...|++.+.|.
T Consensus 6 LrIy~~e~~~~------~g~pl~~~iv~~ar~~ 32 (102)
T d1o51a_ 6 LKIYLGEKDKH------SGKPLFEYLVKRAYEL 32 (102)
T ss_dssp EEEEEETTCEE------TTEEHHHHHHHHHHHT
T ss_pred EEEEEcchhcC------CceEHHHHHHHHHHHC
Confidence 56899988875 4899999999999975
No 8
>d2pbza1 c.30.1.8 (A:4-99) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Thermococcus kodakaraensis [TaxId: 311400]}
Probab=25.81 E-value=1.4 Score=29.94 Aligned_cols=23 Identities=13% Similarity=0.146 Sum_probs=17.2
Q ss_pred CcCCCCCeEEEEec-cc-eeEeecc
Q 039601 43 SSTAEKGHFVVHTT-DQ-IRFVIPL 65 (150)
Q Consensus 43 ~~~vpkG~~~VyVG-e~-~RfvVp~ 65 (150)
..-+|.|-|++|+| |+ +.+.||+
T Consensus 59 aI~IPhgSfv~Y~G~~~ie~~~VP~ 83 (96)
T d2pbza1 59 GIVVPHGSFVAYLGIEAIEKAKARF 83 (96)
T ss_dssp SBCCCBTTHHHHSCHHHHHTCCSCC
T ss_pred eEEEcCCCEEEEecHHHHhhCCCCc
Confidence 35789999999999 32 4566664
No 9
>d1yu5x1 a.14.1.1 (X:10-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=25.63 E-value=8.2 Score=24.26 Aligned_cols=20 Identities=15% Similarity=0.419 Sum_probs=18.3
Q ss_pred cCcCcHHHHHHHHHhHHhcC
Q 039601 66 KYLENNIIRELFRIAEDEFG 85 (150)
Q Consensus 66 ~yLnhP~F~~LL~~aeEEfG 85 (150)
.||+.-.|++++.++.+||-
T Consensus 31 ~yLsd~dF~~vFgms~~eF~ 50 (67)
T d1yu5x1 31 NHLSDEDFKAVFGMTRSAFA 50 (67)
T ss_dssp GGSCHHHHHHHHSSCHHHHH
T ss_pred hhCCHHHHHHHHCcCHHHHH
Confidence 59999999999999999974
No 10
>d2o35a1 a.293.1.1 (A:2-80) Hypothetical protein SMc04008 {Rhizobium meliloti [TaxId: 382]}
Probab=25.02 E-value=5.6 Score=25.97 Aligned_cols=34 Identities=24% Similarity=0.490 Sum_probs=28.8
Q ss_pred cHHHHHHHHHHHhccchHHHHHHHHHhhhccC-CCCC
Q 039601 97 DAIVMKYVVSLIQKHVAKDVEKAILLSLSVIG-HCLP 132 (150)
Q Consensus 97 ~~~~Fe~vl~~i~~~~~~d~~~a~l~~~~~~~-~~~~ 132 (150)
++..|+.++..|+.+ .||+--=||-+|.=| +|.+
T Consensus 12 eAaaFrrL~~HL~~r--~dVQNIDLMnLaGFCRNCLs 46 (79)
T d2o35a1 12 EAAVFRRLLEHLRER--SDVQNIDLMNLAGFCRNCLS 46 (79)
T ss_dssp HHHHHHHHHHHHHHT--TTSCHHHHHHHHSCCHHHHH
T ss_pred HHHHHHHHHHHHHhC--ccchhhHHHHHHHHHHHHHH
Confidence 478999999999986 778888899999988 5754
No 11
>d2al3a1 d.15.1.2 (A:10-85) Tether containing UBX domain for GLUT4 (Tug) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.98 E-value=33 Score=21.76 Aligned_cols=37 Identities=5% Similarity=0.086 Sum_probs=28.8
Q ss_pred eEEEEeccceeEeecccCcCcHHHHHHHHHhHHhcCCCC
Q 039601 50 HFVVHTTDQIRFVIPLKYLENNIIRELFRIAEDEFGMPG 88 (150)
Q Consensus 50 ~~~VyVGe~~RfvVp~~yLnhP~F~~LL~~aeEEfG~~~ 88 (150)
++.|..-..+|..|++. -+-...+.|++|=+.|||+.
T Consensus 2 ~V~Vl~~~~rR~~VKvt--P~t~l~~VL~eaC~k~~~~~ 38 (76)
T d2al3a1 2 AVSVLAPNGRRHTVKVT--PSTVLLQVLEDTCRRQDFNP 38 (76)
T ss_dssp CEEEECTTSCEEEECCC--TTSBHHHHHHHHHHHTTCCG
T ss_pred cEEEECCCCcEEEEEeC--CCcCHHHHHHHHHHHhCCCh
Confidence 45666667899999875 34467889999999999974
No 12
>d1ujsa_ a.14.1.1 (A:) Actin-binding LIM protein homologue KIAA0843 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.84 E-value=11 Score=24.83 Aligned_cols=20 Identities=20% Similarity=0.399 Sum_probs=18.6
Q ss_pred cCcCcHHHHHHHHHhHHhcC
Q 039601 66 KYLENNIIRELFRIAEDEFG 85 (150)
Q Consensus 66 ~yLnhP~F~~LL~~aeEEfG 85 (150)
.||++--|++++.++.+||-
T Consensus 46 ~YLSdedF~~vFgMsr~eF~ 65 (88)
T d1ujsa_ 46 RHLSQEEFYQVFGMTISEFD 65 (88)
T ss_dssp GGSCTTHHHHHHSSCHHHHT
T ss_pred hcCCHHHHHHHHCcCHHHHH
Confidence 59999999999999999985
Done!