BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039602
(2132 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|302141758|emb|CBI18961.3| unnamed protein product [Vitis vinifera]
Length = 2149
Score = 1361 bits (3523), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 914/2118 (43%), Positives = 1214/2118 (57%), Gaps = 191/2118 (9%)
Query: 80 HRISINDDRLQQHQQTDRRHHHHRQHPVADFEARQDVWDRHPR----IQPDHRPVVSRLD 135
HR+S N L + R HH P +R +R PR I+ DH +R
Sbjct: 144 HRVS-NRTLLDDDRHRLRVHHFDNSRPEFWDPSRVSTENRPPRLYHVIRSDHETSHNR-- 200
Query: 136 RHHEFDHRPLSPYRSMDKIKHELDTTSYRFRERYSNDVVQFEHT---------GSNNSNQ 186
F+H P+SP+R++ + +H+ + +S RFR+ + FEH G S+
Sbjct: 201 ---SFNHNPVSPFRAIGEFRHDPEGSS-RFRDELNGG---FEHKRVEELVWGRGEGRSHD 253
Query: 187 RVDFVSHRSQ---------------FVSTSDRLNSSNYDNQHGSQFDSNEL-------MS 224
D SH Q FV D + NYD+++GS D + +S
Sbjct: 254 DFDRHSHLVQNANKSLRNIGFGDSHFVVEPDSSSLGNYDSRYGSSRDEEFIRNGRGDGVS 313
Query: 225 NNVRDVGLNRPVFKERESRDSLLGRGSNSENSGDGVRAFSGKREFYASDAGRYGNNRGSR 284
N R +P +R++ + L+G +N + G GV+ FS KR A + G++ NRGSR
Sbjct: 314 ENQRWAHSRQP---QRDAANYLIGLENNEIDDGGGVQVFSFKRGPNALELGKF-TNRGSR 369
Query: 285 EHSYEYNRTPRKQVQKKSALLRIQ--KPYYRNRDDGELHHSNYEIKSGSFRGKDQVVFSD 342
E S+E+ R+PRK++QKKSALLRIQ KP R RDDG+ ++ E S +RGK+ + + D
Sbjct: 370 EGSHEFTRSPRKKIQKKSALLRIQLQKPSPRKRDDGQFYYD--ESTSSQYRGKEPLEYLD 427
Query: 343 RDVGEHEQREGSPVELDVSFKSNSLVAKAIVATSSSAIVSDANL--TPKKGNTRKIVMSN 400
G ++RE SPVELDVSFKSNSLVAKAI+A SS +VSD NL P+ RKI + N
Sbjct: 428 H--GMADKRERSPVELDVSFKSNSLVAKAIMAPSSPTVVSDRNLCLIPRNRELRKITLPN 485
Query: 401 KDHSSLQMNKPLDSSRKLGGSRDAVNNALVSED---KDSKQAEKKVAPSCANKCDT-NSN 456
D+SS Q+NK + K RD + + + KD KQ ++KV S T +S
Sbjct: 486 MDNSSSQLNKLNEEPVK----RDCLPSVVADPSLCHKDPKQLKEKVTASGLETVQTFSSK 541
Query: 457 PCSSGSNTSPAKITVE-KLKSIVPEKC----GTTKTSALKVAKKKKVAKRVVKKAINPTV 511
PCSSG+N S VE L S+V EK G+ S+ KV KKKKV ++K P
Sbjct: 542 PCSSGTNISLENNRVEGSLNSMVSEKVAASIGSGGMSSPKVTKKKKV----IRKVSIPIS 597
Query: 512 HVSGSQPTEKLDELLKADASTLGAPAASVLKMGVKPSKDKISSAAMASGHLDDLQAYTYE 571
S SQ T+K E A S+ P+A+ K+KI+SA + S + + T
Sbjct: 598 RASNSQLTKKPGE---APGSSTLRPSAASSSNNAAHPKEKITSAGLIS--VTGVNEVTAL 652
Query: 572 ANMSPGTEQVGGSPETAMVSKEVSTDGDSCAPCVTKIKRKRSGSISRLACSSHKETKIDE 631
+ + E + + +S++ TD S CV ++ KR+ SS KET E
Sbjct: 653 SKNNKVNESL-----LSNISEKSVTDTVSGQACVAELTEKRNRLSPPSGFSSQKETNFHE 707
Query: 632 GSVNADGCLHVLNTASNFDKDLTKLLNETNFSDIGGLEGADKHFCHNGHSLLHENSETKE 691
G +N +G +H LN SN +K LT+ NET + DI G+ C NG S+ EN K
Sbjct: 708 GPINTEGSIHDLNVISNSEKGLTRSPNETTYIDIDGISDVSMQICQNGPSVSLENDVLKG 767
Query: 692 YSEPLLREGRNINSDLKSLEEIRRHEVHVNTCSSAHGMNTTTSCNIGLLSSQEKMTDSEV 751
SE +L G N+N L SLEE + HE NT +S H +N +S + L+ +QEK++ S++
Sbjct: 768 SSETMLSVGGNVNVCLSSLEETKIHEGLANTNNSVHDLNIGSSSDCDLIKTQEKISTSDI 827
Query: 752 GILNASSKQPCKGQMSSSVNSSTVEGCPSVMLPGRCEISAFSSSEETDFHNASTHVDHSN 811
G + A S+ PC +S +E L G + S +E H +VD S+
Sbjct: 828 GTVGAVSRHPCSNHVSV-----LLENPRPFSLGGNASVPVLCS-KENKTHEGPLNVDGSS 881
Query: 812 GDKGSCSGSDRVIINSE----EINPGTGDYNGRQLATNEVTIAIEGGHAGGLANTMFSVG 867
G+ SD + S+ N G D G+QL+ + V +++E G A M S+G
Sbjct: 882 NRTGTALTSDHGLTKSQVKITASNTGIVDDAGKQLSQDGVIMSVENGAIERPAKDMASMG 941
Query: 868 SREFGMSNNTD-------KCKVMTSVSDFPDAMVSDMDTGPVKAFSSVQSLNTALSVKDS 920
+ + D K K+ TS SD + + + P+ +S ++ LS
Sbjct: 942 G-NLNVDSGKDYTPKGKKKRKIRTSQSDL--SHSAKVHVKPLNVITSRHDVDATLSCSMK 998
Query: 921 FPVEVRVTEG-LDVGLQSSSDGLSVFRGHNSTGGCSEANVS---ESSGLNGSSPENRKRR 976
P G L VG ++ D +SV G++S SEA VS G NG+SP+ +KRR
Sbjct: 999 DPSLANSYVGSLKVGSEACEDRVSVLHGNSSMKDLSEAKVSFRDVDVGQNGTSPKLKKRR 1058
Query: 977 KVSANHPGFTSEIVPQISEGPVTPDLSTSGVELPSNSTEGQMHPEEGVAVSNMDTLCDSS 1036
K PGF+S + P+I + + PD ST G E+PSNS + EE V VS + T+ +
Sbjct: 1059 KGFVPDPGFSSPMGPEIHKESLIPDASTIGPEVPSNSNDCLTQSEEQVPVSGI-TMSATG 1117
Query: 1037 LPPCPDGITVLLDSGSAQISSEVAVSVHTNASGFGDDSLKVEPCIVEPSLAFGESDNANV 1096
L PC +G TVL ++ + + + E SV GDDS + ++PS+ E ++
Sbjct: 1118 LQPCLEGNTVLPENRTTRGNFEAMSSV-------GDDSSANDMKFLQPSVIVEELAIPSL 1170
Query: 1097 RTTCPPGSEGKQIVNEDPVVDGTNYNNEDMCTEKSKMENIEAFVVEEQVKACNVTTEF-V 1155
+++CP G + I E P + ++ NE M E E I +EE T +
Sbjct: 1171 QSSCPSGLRVELI--ETPGMSSVDHQNEIMGLESGIRERISVHGLEEPGMLRRGTADCKS 1228
Query: 1156 TPEHQSSDLNKILPATDVESDCCLLERGDLSRA---YRALVADGDGVSTTNSYDEMMEF- 1211
T ++ DLN+ +T +E D L + D Y ++ ADG+GVS TNS DE+M+
Sbjct: 1229 TAALETLDLNRRQLSTGMECDTHTLMKDDKQPTVSNYLSIAADGNGVSPTNSNDELMQSL 1288
Query: 1212 -DSISELGSPEILSTVPVMNALNHEASASQISNEKVCRIEKIPSEEPVDEGFFNLSAHTS 1270
D++S + SPE L +P ++ L+ E S QIS++K C ++ E+P+ + L AH S
Sbjct: 1289 PDTLSNMASPETLPLIPGLHTLDTELSVEQISDQKGCGDDRKSDEKPMVDCGSVLFAHNS 1348
Query: 1271 PSEHAKINLKLDDMLESAHLVAQRTVSLPAQDVKDTGLTLNPMSGETNGKKHQASHCVSR 1330
S+ ++ N KLDD + S + + +TV +QD K T ++N +SGE NG K+ ++ V R
Sbjct: 1349 CSQSSESNFKLDDAIGSDNSINGKTVQPSSQDTKRTTHSVNLISGELNGSKNHLNNLVPR 1408
Query: 1331 IHPRRSSSVFTASRDLASSTRTTCTTRPRTWHRTESSSASPAPGNKSLLPPQNQLPKKVA 1390
+ P SS S+ ASST +PRTW+RT +SS+S PPQ QL KK+
Sbjct: 1409 VFPAPSSFFLANSKKTASSTHIA---KPRTWYRTGASSSSLKKPLSIAFPPQRQL-KKIG 1464
Query: 1391 KYQSMSYIRKGNSLVRKPAPVAAVSQISHGLTSSVYWLNSSGIGESKKTRGSEGGADVVD 1450
K Q SYIRKGNSLVRKPAPVA + Q SHGL+SSVY LN SG+ E +K GSE DV+D
Sbjct: 1465 KVQGTSYIRKGNSLVRKPAPVAVIPQGSHGLSSSVYRLNPSGVDEMRKRTGSESRTDVID 1524
Query: 1451 PP--SFLRGVNAPLERPRTPPLPVVAKVPNHATSSTGDYTSSPVAEPLPNGCSETKSDTQ 1508
P S +AP ERP+TPPLP K+P T S+ +S A+ +G +E
Sbjct: 1525 PSNRSSTGATDAPSERPQTPPLPYSTKLPKCTTISSVPMSSEDGAKS--SGSTE------ 1576
Query: 1509 KLMEINDELNFSNAALNISKTPVNQTGSVNGLESQGELNDGTLCTSNVKRITYLKRKSNQ 1568
NQTG +N LESQ LNDG +S +KR+TY+KRKSNQ
Sbjct: 1577 -----------------------NQTGLINNLESQSVLNDGNSESSKLKRVTYVKRKSNQ 1613
Query: 1569 LIAASNGCSLSVQNPDKTQSTASDGYYKRRKNQLIRTPLESHINQTVSLADGSFTSEGEK 1628
L+AASN +SVQN DKT + +SD DGS SEG++
Sbjct: 1614 LVAASNPHDMSVQNADKTPALSSDD-------------------------DGS-NSEGQR 1647
Query: 1629 CAKDIFRRSDMSQ-SYKAVKKICKPIRFSLVWTLNSMQSSKSDDHFLYRGKVLPSLFPWK 1687
K + +S + S K + K +P +FSLVWTL QSS+ D + ++ VLPSLFPWK
Sbjct: 1648 PPKLVSSKSSSKRPSDKVLSKTREPSKFSLVWTLRGAQSSEKDGNSVHSQGVLPSLFPWK 1707
Query: 1688 RTLYWRRFVQDPVSISNNSSLSAISRKLLLLRKRDTVYTRSNHGFSLRKYKVLSVGGSSL 1747
R YWR F+ +P SI N++SLS ISRKLLLLRKRDTVYTRS GFSLRK KVL VGGSSL
Sbjct: 1708 RATYWRSFMHNPASIPNSTSLSMISRKLLLLRKRDTVYTRSTGGFSLRKSKVLGVGGSSL 1767
Query: 1748 KWSKSIENRSKKVNEEATLAVAAVE-KKRQENGAESFASETKIRIRSCRERIFRIGSVRY 1806
KWSKSIE +SKK NEEATLAVAAVE KKR++NGA S SET+ R S RERIFR+GSVRY
Sbjct: 1768 KWSKSIERQSKKANEEATLAVAAVERKKREQNGAASVISETESRNHSSRERIFRVGSVRY 1827
Query: 1807 KMDSSRRTLQRISDDSSPCAAGPTLEKNAKKSYIPRRLVIGNDEYVRIGNGNQLIRDPKR 1866
KMDSSRRTLQRISD S C+A EKNAKK YIPRRL+IGNDEYV+IGNGNQLIR+PK+
Sbjct: 1828 KMDSSRRTLQRISDGDSTCSAALQSEKNAKKPYIPRRLLIGNDEYVQIGNGNQLIRNPKK 1887
Query: 1867 RARVLASEKVRWSLHTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFL 1926
R R+LASEKVRWSLHTARLRLA+K KYCQFFTRFGKCNKD+GKCPYIHDPSKIAVCTKFL
Sbjct: 1888 RTRILASEKVRWSLHTARLRLAKKWKYCQFFTRFGKCNKDDGKCPYIHDPSKIAVCTKFL 1947
Query: 1927 KGLCSNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCAD 1986
GLCSN +CKLTHKVIPERMPDCSYFLQGLC N++CPYRHV+VNPNAS CEGFL+GYCAD
Sbjct: 1948 NGLCSNPNCKLTHKVIPERMPDCSYFLQGLCNNESCPYRHVNVNPNASVCEGFLRGYCAD 2007
Query: 1987 GDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSRKPKNTHGRYFGSMLV 2046
G+ECRKKHSYVCP F+ATGSC LG+KC+LHHPK+RS GKK ++SR+ N GRYFG V
Sbjct: 2008 GNECRKKHSYVCPIFEATGSCPLGSKCKLHHPKNRSKGKKKKQSRE-LNAQGRYFGFRHV 2066
Query: 2047 EDSESQTAMSERPTVQNNGNL-FVEGKLVDYIGLDVSDKEAGETNDALHELLDFNDSGAS 2105
+ + + +SE+ T +NN ++ F EG+ DYI LDVSD++ G N + S S
Sbjct: 2067 NNRDPEKVVSEKDTAKNNDDISFQEGRFADYISLDVSDEDIGSINGPRTQQTTLFGSEPS 2126
Query: 2106 ELQLDDLDELIKPIRIMN 2123
L LDDLDELIKP+ IMN
Sbjct: 2127 YLHLDDLDELIKPVLIMN 2144
>gi|224066791|ref|XP_002302217.1| predicted protein [Populus trichocarpa]
gi|222843943|gb|EEE81490.1| predicted protein [Populus trichocarpa]
Length = 2120
Score = 1288 bits (3334), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 942/2149 (43%), Positives = 1189/2149 (55%), Gaps = 196/2149 (9%)
Query: 55 QFSPNFSPNPKPQNQYHHQRSNDFAH-----RIS--INDDRLQQHQQTDRRHHHHRQHPV 107
QFS N SPN PQ +H D H R+S ND+RL + + H H P
Sbjct: 87 QFSYNHSPN-HPQLSHH-----DLPHFTQLPRVSHQFNDERLPPRRLPESDHRVHEPRP- 139
Query: 108 ADFEA-RQDVWDRHP---RIQPDHRPVVSR---LDRHHEFDHRPLSPYRSMDKIKHELDT 160
DF R D RH P+ R + R +DR E H I+ E +
Sbjct: 140 -DFRVLRHDRQTRHELEGNPNPNSRLIQDRNIVIDRESEHYH-----------IRGEFGS 187
Query: 161 TSYR-----FRERYSNDVVQFEHTGSNNSNQRVDFVSHRSQFVSTSDRLNSSNYDNQHGS 215
S R FR SN V FE N N+R RLN +D +
Sbjct: 188 NSDRSSAGDFRT-VSNQVRGFESNSGNYENRR---------------RLNYDYHDKGSAN 231
Query: 216 Q--FDSNELMSNNVRDVGLNRPVFKERESRDSLLGRGSNSENSGDGVRAFSGKREFYASD 273
Q F E++ RE RDS + GSN G+ R +GKRE Y S
Sbjct: 232 QSWFRDREVV----------------REPRDSSIEFGSNEIGDGE-TRIATGKREHYRSR 274
Query: 274 AG-----RYGNNRGSREHSYEYNRTPRKQVQKKSALLRIQKPYYRNRDDGELHHSNY--E 326
G R+G R SRE SYE+NRTPRKQVQKKSALLRIQ+P YRNR+D L +S Y +
Sbjct: 275 EGNLEVERHGGKR-SREGSYEFNRTPRKQVQKKSALLRIQQPSYRNREDERLPYSGYVDD 333
Query: 327 IKSGSFRGKDQ------------VVFSDRDVGEHEQREGSPVELDVSFKSNSLVAKAIVA 374
KS SFRGKDQ V+ +DR +GE E REGSPVELDVSFKSNSLVAKAI+
Sbjct: 334 TKSSSFRGKDQESGFFRGKDKDKVIHTDRGMGEGE-REGSPVELDVSFKSNSLVAKAILT 392
Query: 375 TSSSAI-VSDANLTPKKGNTRKIVMSNKDHSSLQ--MNKPLDSSRKLGGSRDAVNNALVS 431
SS+ + S+ LTP+ RK+++ KD S+ MNKP + ++G + A S
Sbjct: 393 PSSTTVGASETILTPRNSKVRKVLVPAKDKDSINSSMNKPSKVAVEVGKGASVASKASSS 452
Query: 432 EDKDSKQAEKKVAPSCANKCDTNSNPCSSGSNTSPAKITVEKLKSIVPEKCGTT-KTSAL 490
+ K E +A N D++S P + S +K V + GT K S+L
Sbjct: 453 DKDLKKSREGVIASGITNVRDSSSMPLKNRVEMS--------MKRTVAVRIGTPGKISSL 504
Query: 491 KVAKKKKVAKRVVKKAINPTVHVSGSQPTEKLDELLKAD--ASTLGAPAASVLKMGVKPS 548
KKK V + V K + + +S SQPT+ DE +KAD A T P +
Sbjct: 505 GGKKKKVVKRVVKKVVSHNST-LSSSQPTKTRDEPVKADSFAHTPAEPRDT--------- 554
Query: 549 KDKISSAAMASGHLDDLQAYTYEANMSPGTEQVGGSPETAMVSKEVSTDGDSCAPCVTKI 608
DK ++ A + Q EA + P ++V E M S + S
Sbjct: 555 -DKAATVADVNS-----QPCPIEATVIPENDRVE-RFEKFMESGQAGAGAYSGNLFSYNS 607
Query: 609 KRKRSGSISRLACSSHKETKIDEGSVNADGCLHVLNTASNFDKDLTKLLNETNFSDIGGL 668
K+S S S L S+H ETK E VN D C L+ N D LTK L+E SDIGG+
Sbjct: 608 SGKKSCSRSPLGSSNHNETKFGESFVNGD-CAEALHAIPNIDDSLTKSLDEIISSDIGGV 666
Query: 669 EGADKHFCHNGHSLLHENSETKEYSEPLLREGRNINSDLKSLEEIRRHEVHVNTCSSAHG 728
E K C NG S L EN+ + + + N + L SLE+ HE + +C G
Sbjct: 667 EDVSKQPCQNGDSCLLENNAVRGSLKVMDSIEGNTDFGLLSLEKTIIHEDPMYSCIPVMG 726
Query: 729 MNTTTSCNIGLLSSQEKMTDSEVGILNASSKQPCKGQMSSSVNSSTVEGCPSVMLP-GRC 787
++ + ++SQ+++T S+ G + K+PC+ Q S S + P G
Sbjct: 727 LD------VASINSQQRITVSDKGTSDVGCKEPCRNQGSPLAESGITDFLQGASFPVGSN 780
Query: 788 EISAFSSSEETDFHNASTHVDHSNGDKGSCSGSDRVIINSEEINP---GTGDYNGRQLAT 844
EI S SEET NA + N G+ GS N EEI+ GTGD G +L+
Sbjct: 781 EIFTVSISEETGSQNAVIRL---NQGVGTILGSPNCFTNVEEIDISGHGTGDGMGEELSQ 837
Query: 845 NEVTIAIEGGHAGGLANTMFSV--GSREFGMSNNTDKCKVMTSVSDFPDAMVSDMDTGPV 902
+E G +T S G E DK K+ SD V DM P
Sbjct: 838 YGAAKTLESEPIRGSLDTKVSTSGGEEEANDIKENDK-KIEMPQSDLSRTDVPDMHLEPA 896
Query: 903 KAFSSV------QSLNTALSVKDSFPVEVRVTEGLDVGLQSSSDGLSVFRGHNSTGGCSE 956
+S ++L + + +D G QS S+ +SV S S
Sbjct: 897 NMVTSTTAHWVDKTLRLCFEDDGTAQCTFSGAQFVDAGSQSCSNVVSVLH-EGSLTDVSA 955
Query: 957 ANVSESS----GLNGSSPENRKRRKVSANHPGFTSEIVPQISEGPVTPDLSTSGVELPSN 1012
A VS S G G+S N K RK SA S + EGPV STSG+E+PSN
Sbjct: 956 AKVSVRSSADVGQRGASQRNEKNRKSSAPQLELCSPVESDADEGPVFAGNSTSGMEVPSN 1015
Query: 1013 STEGQMHPEEGVAVSNMDTLCDSSLPPCPDGITVLLDSGSAQISSEVAVSVHTNASGFGD 1072
S + P+ V VS+MD+LC S L GIT LL++GSA E SV + F
Sbjct: 1016 SGDSLTLPKGEVVVSDMDSLCTSDLLLAQKGITALLENGSA---GEHLSSVASIKDAFEV 1072
Query: 1073 DSLKVEPCIVEPSLAFGESDNANVRTTCPPGSEGKQIVNEDPVVDGTNYNNEDMCTEKSK 1132
D LK V+ L+ E V + S G+ I+N PV+ G N+ M + +
Sbjct: 1073 DGLK----DVQSHLSVEELAVKKVTSHSLFVSVGEDIINTTPVMVGGRNQNDYMDIDAVE 1128
Query: 1133 MENIEAFVVEEQVKACNVTTEFVTPEH-QSSDLNKILPATDVESDCCLLERGD---LSRA 1188
++ EEQV +VT P Q+ L++ +P+ DV+ + D +S
Sbjct: 1129 GAKVDIDAAEEQVGTESVTDHCQIPSKLQTQYLDENIPSIDVDDGGFHGAKNDSPCMSNN 1188
Query: 1189 YRALVADGDGVSTTNSYDEMMEF--DSISELGSPEILSTVPVMNALNHEASASQISNEKV 1246
+ DG GVS TNS DE++E +++S+ GSPE L V S S+ S EK+
Sbjct: 1189 PSSF-GDGFGVSFTNSGDELVEIVPETLSDRGSPETLPDV-------MGTSLSKNSVEKI 1240
Query: 1247 CR-IEKIPSEEPVDEGFFNLSAHTSPSEHAKINLKLDDMLESAHLVAQRTVSLPAQDVKD 1305
+KIP+E PV + S S S++AK+ L LD +E L+ +T LP+QD K
Sbjct: 1241 HENDDKIPAERPVINVGSDSSMSISSSQNAKVVLNLDHAVERDQLLTGKTGHLPSQDSKI 1300
Query: 1306 TGLTLNPMSGETNGKKHQASHCVSRIHPRRSSSVFTASRDLASSTRTTCTTRPRTWHRTE 1365
T N SG+ GKK+ +SH +S+I+ RSS VF+AS+ ASS+R + T RTWHR +
Sbjct: 1301 TTQMPNAKSGDLYGKKNHSSHPISKIYSGRSSFVFSASKSSASSSRISKT---RTWHRND 1357
Query: 1366 SSSASPAPGNKSL---LPPQNQLPKKVAKYQSMSYIRKGNSLVRKPAPVAAVSQISHGLT 1422
+ S S P NK+ +P Q P+K K Q SYIRKGNSLVRKP VA S H L+
Sbjct: 1358 NCSDSAPPSNKAFSSTVPAQRLFPRKGDKSQRTSYIRKGNSLVRKPTSVAQ-SPGPHALS 1416
Query: 1423 SSVYWLNSSGIGESKKTRGSEGGADVVDPPSFLR--GVNAPLERPRTPPLPVVAKVPNHA 1480
SSVY LNSSG E KK+ GS+ D+ DP + LR G++A E+PRTP L V+K+ N A
Sbjct: 1417 SSVYQLNSSGTDEPKKSAGSDSRIDLADPLNVLRTGGMDASFEKPRTPSLSSVSKISNRA 1476
Query: 1481 TSSTGDYTSSPVAEPLPNGCSETKSDTQKLMEINDELNFSNAALNISKTPVNQTGSVNGL 1540
++S G SSP+AE L + C+ET + KL+E ND S+ L IS +P+ Q ++ L
Sbjct: 1477 SNSLGGRASSPLAEHLHSLCTETVTVPAKLLESNDVPKSSDDVLKISGSPITQNSQISNL 1536
Query: 1541 ESQGELNDG-TLCTSNVKRITYLKRKSNQLIAASNGCSLSVQNPDKTQSTASDGYYKRRK 1599
E + NDG T+ +N K +TY+KRKSNQL+A+SN C+ SVQN +T+SD YYKRRK
Sbjct: 1537 ECHSDTNDGNTVALANGKSLTYVKRKSNQLVASSNPCASSVQN---AHNTSSDSYYKRRK 1593
Query: 1600 NQLIRTPLESHINQTVSLADGSFTSEGEKCAKDIFRRSDMSQSYKAVKKICKPIRFSLVW 1659
NQLIRT LES I QT S+ D S SEG+ R + K V K CKP + SLVW
Sbjct: 1594 NQLIRTSLESQIKQTASIPDESLNSEGQTALNSFSRNFSKRRQRKVVTKTCKPSKLSLVW 1653
Query: 1660 TLNSMQSSKSDDHFLYRGKVLPSLFPWKRTLYWRRFVQDPVSISNNSSLSAISR----KL 1715
TL+ Q SK+D + GKVLP LFPWKR Y R + + SIS++SSLS I KL
Sbjct: 1654 TLHGAQLSKNDGDSSHCGKVLPHLFPWKRATYRRSSLPNSSSISDHSSLSTIGYNNWWKL 1713
Query: 1716 LLLRKRDTVYTRSNHGFSLRKYKVLSVGGSSLKWSKSIENRSKKVNEEATLAVAAVE-KK 1774
LLLRKR+T YTRS HGFSLRK KVLSVGGSSLKWSKSIE SKK NEEATLAVAA E KK
Sbjct: 1714 LLLRKRNTEYTRSKHGFSLRKSKVLSVGGSSLKWSKSIEKHSKKANEEATLAVAAAERKK 1773
Query: 1775 RQENGAESFASETKIRIRSCRERIFRIGSVRYKMDSSRRTLQRISDDSSPCAAGPTLEKN 1834
R++ GA A TK R S RERIFR+GSVRYKMDSSRRTLQRISDD S CA EK+
Sbjct: 1774 REQRGAAHVACPTKSRNIS-RERIFRVGSVRYKMDSSRRTLQRISDDESSCAGALQKEKD 1832
Query: 1835 AKKSYIPRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYC 1894
AKK YIPRRL+IG DEYVRIGNGNQLIRDPK+R R+LASEKVRWSLHTAR RLARKRKYC
Sbjct: 1833 AKKLYIPRRLMIGKDEYVRIGNGNQLIRDPKKRTRILASEKVRWSLHTARSRLARKRKYC 1892
Query: 1895 QFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQ 1954
QFFTRFGKCNKD+GKCP+IHD SKIAVCTKFL GLC N DCKLTHKVIPERMPDCSYFLQ
Sbjct: 1893 QFFTRFGKCNKDDGKCPFIHDSSKIAVCTKFLNGLCFNPDCKLTHKVIPERMPDCSYFLQ 1952
Query: 1955 GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALGAKCR 2014
GLCTNKNCPYRHVHVNPNASTCEGFL+GYCADG+EC KKHSYVCP+F+A GSC G+KC+
Sbjct: 1953 GLCTNKNCPYRHVHVNPNASTCEGFLRGYCADGNECPKKHSYVCPSFEAIGSCPQGSKCK 2012
Query: 2015 LHHPKSRSNGKKSRRSRKPKNTHGRYFGSMLVEDSESQTAMSERPTVQNNGNLFVEGKLV 2074
LHHPK+R+ KKS+RSR+ N GRYFG M + ++++ A+ + VQ+N + +G +
Sbjct: 2013 LHHPKNRTKEKKSKRSRE-NNAQGRYFGLMHINATKTRNAVPGKLYVQDNDTICFKG-IA 2070
Query: 2075 DYIGLDVSDKEAGETNDALHELLDFNDSGASELQLDDLDELIKPIRIMN 2123
DYI LDVSD+E E N+ F DS LQL DLD+LIKP+RIMN
Sbjct: 2071 DYISLDVSDEEVVENNNPGDLHTAFGDSDPLNLQLGDLDKLIKPVRIMN 2119
>gi|255558556|ref|XP_002520303.1| protein with unknown function [Ricinus communis]
gi|223540522|gb|EEF42089.1| protein with unknown function [Ricinus communis]
Length = 2030
Score = 1260 bits (3260), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 867/1950 (44%), Positives = 1104/1950 (56%), Gaps = 184/1950 (9%)
Query: 240 RESRDSLLGRGSNSENSGDGVRAFSGKREFYAS--DAGRYGNNRGSREHSYEYNRT-PRK 296
R R+ + G + + DG R KRE Y S + SRE S+E++RT PRK
Sbjct: 200 RRGREIIRGVHDSVISDSDGNR----KREHYRSSREFNVESGQGSSREGSHEFSRTTPRK 255
Query: 297 QVQKKSALLRIQKPY---YRNRDDGELHH-------SNYEIKSGSFRG---KDQ-VVFSD 342
Q+ KKSALLRIQKP +R RDD HH +NY S SFRG KDQ + D
Sbjct: 256 QLPKKSALLRIQKPTIQKFRIRDDDRGHHYSAYFDHTNY---SSSFRGIKDKDQNLSHLD 312
Query: 343 RDVGEHEQREGSPVELDVSFKSNSLVAKAIVATSSSAIVSDANLTPKKGNTRKIVMSNKD 402
R+ G+ + REGS +ELDVSFKSNSLVAKAIV + SA VS++NL P+ G R NKD
Sbjct: 313 RETGD-QVREGSTMELDVSFKSNSLVAKAIV--TPSADVSNSNLPPRNGKLR-----NKD 364
Query: 403 HSSLQMNKPLDSSRKLGGSRDAVNNALV------SEDKDSKQAEKKVAPSCANKCDTNSN 456
N S K G+ ++N + S DKD KQ++++V S
Sbjct: 365 K-----NSSSSSPSKANGATIKLDNVVSVAKNTSSSDKDLKQSKEEVKVSV--------- 410
Query: 457 PCSSGSNTSPAKITVEKLKSIVPEKCGTTKTSALKVAKKKKVAK---------RVVKKAI 507
SSG+ K+++ K K P K + V K + R VKKAI
Sbjct: 411 --SSGT-----KVSIGKNKGESPTKGTVSNKGGANVVSGKASSLKVLKKKLVKRPVKKAI 463
Query: 508 NPTVHVSGSQPTEKLDELLKADASTLGAPAASVLKMGVKPSKDKISSAAMASGHLDDLQA 567
NP ++ S S+ T+K D + D+ PA +P K+ AA+ S ++ D Q
Sbjct: 464 NPNLYSSSSKLTKKSDGPIIKDSFVHAQPAY------FQPDKE----AAITSVNVVDSQP 513
Query: 568 YTYEANMSPGTEQVGGSPETAMVSKEVSTDGDSCAPCVTKIKRKRSGSISRLACSSHKET 627
T E N+ P +V G E AMVS+ ++ G C+ IKRKRS S S L SS +ET
Sbjct: 514 CTNETNVMPEKCRVEGCAE-AMVSENGASAGFGRL-CLPNIKRKRSHSTSPLGSSSLEET 571
Query: 628 KIDEGSVNADGCLH---VLNTASNFDKDLTKLLNETNFSDIGGLEGADKHFCHNGHSLLH 684
KI+E VN D + +LNT DKD TKLLNET SDIG +E A K C +G SLL
Sbjct: 572 KINENMVNDDSTNYSHAILNT----DKDYTKLLNETTGSDIGAVEDAAKQLCQSGDSLLL 627
Query: 685 ENSETKEYSEPLLREGRNINSDLKSLEEIRRHEVHVNTCSSAHGMNTTTSCNIGLLSSQE 744
EN+ + LL N + + + + HE + G + GL++ E
Sbjct: 628 ENNAANGSPKYLLSAEGNADCGCSNSVKTKIHEGPAGSSDMILGYESDN----GLINLTE 683
Query: 745 KMTDSEVGILNASSKQPCKGQMSSSVNSSTVEGCPSVMLPGRCEISAFSSSEETD----- 799
+ T + GI + KQPC ++S S+ V+ + G +I +S E T+
Sbjct: 684 RTTVFDNGITDGGCKQPCTNEVSPSIEDDIVDQ----FVNGSSQIWQGTSGEMTNGIVAR 739
Query: 800 -----FHNASTHVDHSNGDKGSCSGSDRVIINSEEINPGTGDYNGRQLATNEVTIAIEGG 854
T D +NG+ ++ E G +Q + + V I+ E
Sbjct: 740 SASPSIEGVGTTFDSNNGNH----------VSREISLSSNGASISKQPSPDRVGISFENV 789
Query: 855 HAGGLANTMFSVGSREFGMSNNTDK--CKVMTSVSDFPDAMVSDMDTGPVKAFSSVQSLN 912
G + M S+G RE + N DK KV +S DF + V+D+ PV +S
Sbjct: 790 PVRGSLSRMVSMGGREEDDTLNIDKSDIKVKSSELDFSKSEVNDVYAEPVNMVTSAWVDT 849
Query: 913 TA-LSVKDSFPVEVRVT--EGLDVGLQSSSDGLSVFRGHNSTGGCSEANVSESSGL---- 965
T LS KD P E V+ E DV + +DG +V S+ SEAN+S SS
Sbjct: 850 TLRLSFKDPTPTEFIVSGDEHRDVDQRPHTDGANVLT-QRSSMDVSEANISVSSTTSVCP 908
Query: 966 NGSSPENRKRRKVSANHPGFTSEIVPQISEGPVTPDLSTSGVELPSNSTEGQMHPEEGVA 1025
N +N+K+RK++ + + + EGP+ +S S ELP NS
Sbjct: 909 NAGLIQNQKKRKITGSQLEMYCPMTSDVVEGPIITGISVSTAELPCNSG----------- 957
Query: 1026 VSNMDTLCDSSLPPCPDGITVLLDSGSAQISSEVAVSVHTNASGFGDDSLKVEPCIVEPS 1085
C S LP T L+ + S A F D L+ CI S
Sbjct: 958 -------CSSDLPSVQKETTASLNCSRVRYDSTAAPFRDV----FEKDGLR---CISSCS 1003
Query: 1086 LAFGESDNANVRTTCPPGSEGKQIVNEDPVVDGTNYNNEDMCTEKSKMENIEAFVVEEQV 1145
A E V++ CP G EG++I PV+ G ++ N + E + E ++ VEEQ+
Sbjct: 1004 TA-EELSVPKVKSVCPTGFEGEKIAGTTPVMAGISHQNNSIHAESGEGEKMDVDAVEEQL 1062
Query: 1146 KACNVTTEFVTP-EHQSSDLNKILPATDVESDCCLLERGDLSRAYRALVA--DGDGVSTT 1202
+ T++ P E QS + ++ +P +VE + CL + L A L + D +G STT
Sbjct: 1063 IVDSGTSQCQCPSEVQSLNSDERMPVVNVEDENCLDAKNGLPSASNNLFSLRDCNGTSTT 1122
Query: 1203 NSYDEMMEF--DSISELGSPEILSTVPVMNALNHEASASQISNEKVCRIEKIPSEEPVDE 1260
++ E M D++ + E L P + S +S ++ ++I +
Sbjct: 1123 DTSGEAMVLVPDTLPNMDYQETLPDAPSI-------LQSSLSIKQAGGNDEILLGMSATQ 1175
Query: 1261 GFFNLSAHTSPSEHAKINLKLDDMLESAHLVAQRTVSLPAQDVKDTGLTLNPMSGETNGK 1320
G +SA TS S + D +E+A+ + +LP+QD K + TLN MS E +G+
Sbjct: 1176 GGSGISAVTSGSL-----ITEDHAVENANSFGGK-ATLPSQDTKSSTQTLNAMSKEISGR 1229
Query: 1321 KHQASHCVSRIHPRRSSSVFTASRDLASSTRTTCTTRPRTWHRTESSSASPAPGNK---S 1377
K SH +P RSS VF AS A S + +PRTWHRT+SS A PGNK S
Sbjct: 1230 K---SHHNIAAYPGRSSFVFLASTSTAPSNHIS---KPRTWHRTDSSFAPALPGNKVFSS 1283
Query: 1378 LLPPQNQLPKKVAKYQSMSYIRKGNSLVRKPAPVAAVSQISHGLTSSVYWLNSSGIGESK 1437
+P + QLPKKV K+ + SYIRKGNSLVRKP VAA SHGL+SS YWLNSSG E K
Sbjct: 1284 TVPTKCQLPKKVTKFHNTSYIRKGNSLVRKPTLVAAQPLGSHGLSSSAYWLNSSGKYEVK 1343
Query: 1438 KTRGSEGGADVVDPPSFLR-GVNAPLERPRTPPLPVVAKVPNHATSSTGDYTSSPVAEPL 1496
K + G V DPP+F++ GV A ERPRTPPLP K+ NH T+S GD SSP+ E L
Sbjct: 1344 KNTDTRTG--VADPPNFVKSGVGASFERPRTPPLPSSTKISNHPTNSMGDCLSSPLVERL 1401
Query: 1497 PNGCSETKSDTQKLMEINDELNFSNAALNISKTPVNQTGSVNGLESQGELNDGTLCTSNV 1556
+E SD E ND L S + +S+ + QTG +N L+ + E NDG +SN
Sbjct: 1402 HICAAEAASDPVTSTESNDVLKSSEDTVKVSEKHMFQTGQINNLDCETEQNDGNAVSSNA 1461
Query: 1557 KRITYLKRKSNQLIAASNGCSLSVQNPDKTQSTASDGYYKRRKNQLIRTPLESHINQTVS 1616
K I Y+KRKSNQLIA SN CSLS++N T + SDGYYKRRKNQLIRT +E+H T S
Sbjct: 1462 KSIKYVKRKSNQLIATSNPCSLSMKNSHSTAALPSDGYYKRRKNQLIRTSVENHEKPTAS 1521
Query: 1617 LADGSFTSEGEKCAKDIFRRS-DMSQSYKAVKKICKPIRFSLVWTLNSMQSSKSDDHFLY 1675
+ D S +EG+ RS +S K V K KP +FS VWTL+S QS K D H L+
Sbjct: 1522 MPDESVNTEGQALHNITSGRSLTKRRSRKVVAKTRKPSKFSSVWTLHSAQSLKDDSHSLH 1581
Query: 1676 RGKVLPSLFPWKRTLYWRRFVQDPVSISNNSSLSAISRKLLLLRKRDTVYTRSNHGFSLR 1735
KVLP L PWKR WR F+ +IS N S S ISRKLLLLRKRDTVYTRS HG+SLR
Sbjct: 1582 SQKVLPQLLPWKRATSWRSFIPSSAAISINGSSSLISRKLLLLRKRDTVYTRSKHGYSLR 1641
Query: 1736 KYKVLSVGGSSLKWSKSIENRSKKVNEEATLAVAAVEKKRQEN-GAESFASETKIRIRSC 1794
K KVLSVGGSSLKWSKSIE +SKK NEEATLAVA E+K++E GA + TK R S
Sbjct: 1642 KSKVLSVGGSSLKWSKSIERQSKKANEEATLAVAEAERKKRERFGASHVDTGTKNRNSSS 1701
Query: 1795 RERIFRIGSVRYKMDSSRRTLQRISDDSSPCAAGPTLEKNAKKSYIPRRLVIGNDEYVRI 1854
RERIFRIGSVRYKMDSSRRTLQRISDD S A EK+AK+ Y+PRRLVIG DEYVRI
Sbjct: 1702 RERIFRIGSVRYKMDSSRRTLQRISDDESSHLAALQTEKDAKRYYVPRRLVIGKDEYVRI 1761
Query: 1855 GNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIH 1914
GNGNQL+RDPK+R R+LASEKVRWSLHTAR RLARKRKYCQFFTRFGKCNKD+GKCPYIH
Sbjct: 1762 GNGNQLVRDPKKRTRILASEKVRWSLHTARSRLARKRKYCQFFTRFGKCNKDDGKCPYIH 1821
Query: 1915 DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNAS 1974
D SKIAVCTKFL GLC N CKLTHKVIPERMPDCSYFLQGLC+N+NCPYRHVHVNPNAS
Sbjct: 1822 DSSKIAVCTKFLNGLCFNPVCKLTHKVIPERMPDCSYFLQGLCSNENCPYRHVHVNPNAS 1881
Query: 1975 TCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSRKPK 2034
TCEGFL+GYC DG+EC+KKHSYVCPT++ATGSC G+KC+LHHPK R G+KS++ R+ K
Sbjct: 1882 TCEGFLRGYCNDGNECQKKHSYVCPTYEATGSCPEGSKCKLHHPKIRIKGRKSKQLREKK 1941
Query: 2035 NTHGRYFGSMLVEDSESQTAMSERPTVQNNGNLFVEGKLVDYIGLDVSDKEAGETNDALH 2094
N+ GRYFGSM V SE TA+SE+ +VQ N N EG + DYI LDVSD EA E ++
Sbjct: 1942 NSRGRYFGSMHVNISEPGTAVSEKHSVQENDNFCFEGSISDYISLDVSD-EAEENSNPAD 2000
Query: 2095 ELLDFNDSGASELQLDDLDELIKPIRIMNS 2124
+ DS A +L+L DLDELIKPIRIMN+
Sbjct: 2001 KQTSLCDSDALDLELVDLDELIKPIRIMNT 2030
>gi|356551213|ref|XP_003543972.1| PREDICTED: uncharacterized protein LOC100788859 [Glycine max]
Length = 2033
Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 569/1334 (42%), Positives = 755/1334 (56%), Gaps = 139/1334 (10%)
Query: 839 GRQLATNEVTIAIEGGHA-GGLANTMFSVGSREFGMSNNTDKCKVMTSVSDF-------- 889
G+Q++ +V I+ E N+ S GS E G +N K + T ++
Sbjct: 770 GKQVSPGDVVISPENWDTEKAFPNSNISAGSGE-GDTNKIKKRRARTLLNFLSSEMECLS 828
Query: 890 -----PDAMVSDMDTGPVKAFSSVQSLNTALSVKDSFPVEV--RVTEGLDVGLQSSSDGL 942
PD++ +++D G ++L +KD P EV + + LD S +G+
Sbjct: 829 SNHVNPDSLANNVDGG------------SSLLLKDPSPSEVLEQPVQSLDFNSLSGVNGV 876
Query: 943 SVFRGHNSTGGCSEANVS----ESSGLNGSSPENRKRRKVSANHPGFT---SEIVPQISE 995
+ G GG EA ++ N SP + KR+KV+AN P FT SE+ I
Sbjct: 877 TALHGK---GGVLEAQFCVGHIDNDDANEVSPAS-KRKKVTAN-PNFTKCQSELSAVI-- 929
Query: 996 GPVTPDLSTSGVELPSNSTEGQMHPEEGVAVSNMDTLCDSSLPPCP--DGITVL------ 1047
+ ++ E P + ++ Q H +E VA +M + SS P + IT +
Sbjct: 930 ------VPSTTSEAPMSFSDNQEHQKE-VAFESMGMIILSSAQSMPYSEDITKMPENVLA 982
Query: 1048 ------LDSGSAQISSEVAVSVHTNASGFGDDSLKVEPCIVEPSLAFGESDNANVRTTCP 1101
+D+ +SSE H++ F PC LAF NV+ +
Sbjct: 983 GGSFESIDANKETMSSEHLELWHSDIVSFS-------PC---EDLAF-----PNVQFS-- 1025
Query: 1102 PGSEGKQIVNEDPVVDGTNYNNEDMCTEKSKMENIEAFVVEEQVKACNVTTEFVTPEHQS 1161
EG+ N P+V +N + + E + VEE + EH
Sbjct: 1026 -SLEGECKENTTPIVPTSNIQTDILAVGNIAGEKTDLQAVEEN---------YQYREHVQ 1075
Query: 1162 SDLNKILPATDVESDCCLLERGDLSRAYRALVADGDGVSTTNSYDEMME-FDSISELGSP 1220
+ D LL + +L + A GD V+T NS DE++E +S++ S
Sbjct: 1076 RSPRADMEPNDHNMKNDLLAQWNL----MSCPASGDEVTTNNSNDEVIEDAPGLSDMFSQ 1131
Query: 1221 EILSTVPVMNALNHEASASQISNEKVCRIEKIPSEEPVDEGFFNLSAHTSPSEHAKINLK 1280
++S VP L A I++E + +++ P + NL +TS + K N+K
Sbjct: 1132 GMVSEVPDRRVLEFTA----INDENIFGVQENPDNISMVGHDSNL--NTSSIQQTKKNMK 1185
Query: 1281 LDDMLESAHLVAQRTVSLPAQ-DVKDTGLTLNPMSGETNGKKHQASHCVSRIHPRRSSSV 1339
D +E ++L+ ++T+S +Q K T LN +G K+Q+ + + P S
Sbjct: 1186 SDHAIEHSNLITKKTMSEQSQVSSKVTTQALNSYCFGLSGTKNQSGSIIPKTFPGHS--- 1242
Query: 1340 FTASRDLASSTRTTCTTRPRTWHRTESSSASPAPGNKSLL---PPQNQLPKKVAKYQSMS 1396
FT S+ ASS + +PRTWHRT ++ + P K L PP+ + + +Q+ S
Sbjct: 1243 FTFSKTSASSPHVS---KPRTWHRTGNNPPASLPRIKPSLGTVPPKKPILEMKGNFQNTS 1299
Query: 1397 YIRKGNSLVRKPAPVAAVSQISHGLTSSVYWLNSSGIGESKKTRGSEGGADVVDPPSFLR 1456
Y+RKGNSLVRKP PV+ + IS +S+ GI E K+ S G ADV D +LR
Sbjct: 1300 YVRKGNSLVRKPTPVSTLPHISSVNQTSL------GIDEIPKSIKSGGRADVTDKQMYLR 1353
Query: 1457 --GVNAPLERPRTPPLPVVAKVPNHATSSTGDYTSSPVAEPLPNGCSETKSDTQKLMEI- 1513
NAP +R TPPLP+ K + + TSS + EP GC E SD +K +E
Sbjct: 1354 TGATNAPQQR--TPPLPIDTK--------SEENTSSSLVEPPSGGCCENASDLRKFIETD 1403
Query: 1514 NDELNFSNAALNISKTPVNQTGSVNGLESQGELNDGTLCTSNVKRITYLKRKSNQLIAAS 1573
N N S AL +T NQ G + +SQGE DG + N KRI Y+K K+NQL+A S
Sbjct: 1404 NIAPNSSEDALKHYETLENQPGPSDNGDSQGEAIDGNVFPLNTKRIVYIKPKTNQLVATS 1463
Query: 1574 NGCSLSVQNPDKTQSTASDGYYKRRKNQLIRTPLESHINQTVSLADGSFTSEGEKCAKDI 1633
N C +SV D Q+ SDGYYKRRKNQLIRT ESHINQTV++++ + S G+ + +
Sbjct: 1464 NSCDVSVSTDDNLQTAFSDGYYKRRKNQLIRTTFESHINQTVAMSNNTAYSGGQGTSNAL 1523
Query: 1634 F-RRSDMSQSYKAVKKICKPIRFSLVWTLNSMQSSKSDDHFLYRGKVLPSLFPWKR-TLY 1691
RR +++K + CK R SLVWTL S SS++D + + LP LFPWKR T
Sbjct: 1524 CNRRFSKRRTHKVGRSSCKRSRASLVWTLCSKNSSENDRDSQHYQRALPQLFPWKRPTFA 1583
Query: 1692 WRRFVQDPVSISNNSSLSAISRKLLLLRKRDTVYTRSNHGFSLRKYKVLSVGGSSLKWSK 1751
+I SSLS S+KLL LRKRDTVYTRS HGFSL+K +VL VGG SLKWSK
Sbjct: 1584 SSLNNSSLSAIRYLSSLS-FSKKLLQLRKRDTVYTRSIHGFSLQKSRVLGVGGCSLKWSK 1642
Query: 1752 SIENRSKKVNEEATLAVAAVEKKRQEN-GAESFASETKIRIRSCRERIFRIGSVRYKMDS 1810
SIE +SK NEEATLAVAAVE+KR+E A +S++K ERIFRIGSVRY+MD
Sbjct: 1643 SIEKKSKLANEEATLAVAAVERKRREQKNAVCISSQSKT-ADCAGERIFRIGSVRYRMDP 1701
Query: 1811 SRRTLQRISDDSSPCAAGPTLEKNAKKSYIPRRLVIGNDEYVRIGNGNQLIRDPKRRARV 1870
SRRTLQRISDD S +A +K++YIPRRLVIGNDEYV+IGNGNQLIRDPKRR R
Sbjct: 1702 SRRTLQRISDDESLSSASTCSGLASKRAYIPRRLVIGNDEYVQIGNGNQLIRDPKRRTRK 1761
Query: 1871 LASEKVRWSLHTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLC 1930
LA+EKVRWSLHTAR RLARK+KYCQFFTRFGKCNKD GKCPYIHDPSKIAVCTKFL GLC
Sbjct: 1762 LANEKVRWSLHTARQRLARKQKYCQFFTRFGKCNKDGGKCPYIHDPSKIAVCTKFLNGLC 1821
Query: 1931 SNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDEC 1990
S +CKLTHKVIPERMPDCSYFLQGLC+N+NCPYRHV+VNP AS CEGFLKGYCADG+EC
Sbjct: 1822 STPNCKLTHKVIPERMPDCSYFLQGLCSNRNCPYRHVNVNPKASICEGFLKGYCADGNEC 1881
Query: 1991 RKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSRKPKNTHGRYFGSMLVEDSE 2050
RKKHSYVCPTF+ATG+C G C+LHHPK +S GKK +R+ N+ GRYFG + + S+
Sbjct: 1882 RKKHSYVCPTFEATGTCTQGTGCKLHHPKKQSKGKKRKRTADQNNSRGRYFGFIPADVSK 1941
Query: 2051 SQTAMSERPTVQNNGNLFVEGKLVDYIGLDVSDKEAGETNDALHELLDFNDSGASELQLD 2110
S ++ + Q NG L E +L DYI LDV ++E + D E F D+ + +LQLD
Sbjct: 1942 SGMMVAPKRHRQ-NGEL--EEELSDYISLDVVNEEVADVVDQSFEPAAFCDNDSLDLQLD 1998
Query: 2111 DLDELIKPIRIMNS 2124
D D LIKP+ ++ +
Sbjct: 1999 DFDGLIKPVLLLKT 2012
>gi|356554654|ref|XP_003545659.1| PREDICTED: uncharacterized protein LOC100802468 [Glycine max]
Length = 2002
Score = 810 bits (2092), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/1311 (42%), Positives = 737/1311 (56%), Gaps = 103/1311 (7%)
Query: 839 GRQLATNEVTIAIEGGHA-GGLANTMFSVGSREFGMSNNTDKCKVMTSVSDF-------- 889
G+Q++ V I+ E N S GS E G +N K K T +
Sbjct: 749 GKQVSPGHVIISPENCETEKAFPNYNVSAGSGE-GDTNMIKKRKDRTHLKYLSSEMECLS 807
Query: 890 PDAMVSDMDTGPVKAFSSVQSLNTALSVKDSFPVEV--RVTEGLDVGLQSSSDGLSVFRG 947
PD + SD V SS L +KD P EV + + LD S DG++
Sbjct: 808 PDYVNSDRLANNVDGGSS-------LLLKDPSPSEVLAQPVQSLDFNSLSGLDGVTALHV 860
Query: 948 HNSTGGCSEANVSESSGLNGSSPENRKRRKVSANHPGFT---SEIVPQISEGPVTPDLST 1004
N+ + VS +S KR+KV+AN P FT SE I P +
Sbjct: 861 VNNDND-NANEVSPAS----------KRKKVTAN-PYFTKCQSEFCAVIVPSPTS----- 903
Query: 1005 SGVELPSNSTEGQMHPEEGVAVS-NMDTLCDSSLPPCPDGITVLLDSGSAQISSEVAVSV 1063
E P + ++ Q H +E V S M L + + IT + ++ A S E S+
Sbjct: 904 ---EAPVSFSDNQEHQKEVVFASMGMSILSTAQSILYSENITKMSENILAGGSFE---SI 957
Query: 1064 HTNASGFGDDSLKVEPCIVEPSLAFGESDNANVRTTCPPGSEGKQIVNEDPVVDGTNYNN 1123
+ + L+++ + ++F S++ EG+ N P+V +N
Sbjct: 958 DADKETMSSEHLELQHSDI---VSFSPSEDVAFPNVQLSSLEGECKENITPIVPTSNIQT 1014
Query: 1124 EDMCTEKSKMENIEAFVVEEQVKACNVTTEFVTPEHQSSDLNKILPATDVESDCCLLERG 1183
+ + + + VEE + EH + D LL R
Sbjct: 1015 DVLAVGIIAGQKTDLQAVEEN---------YQYREHVQRSPRADMEPNDHNMKNDLLARQ 1065
Query: 1184 DLSRAYRALVADGDGVSTTNSYDEMMEF--DSISELGSPEILSTVPVMNALNHEASASQI 1241
+L + A D V+T+N +E++E D++S++ S + S VP L A I
Sbjct: 1066 NL----MSCPASSDEVTTSNLNNEVIEDVPDALSDMFSQGMASEVPDQRVLEFTA----I 1117
Query: 1242 SNEKVCRIEKIPSEEPVDEGFFNLSAHTSPSEHAKINLKLDDMLESAHLVAQRTVSLPAQ 1301
++E +C +E+ P G + +TS + + N+K +E ++L+ ++T+S P+Q
Sbjct: 1118 NDENICGVEENPDNNISIVGHGS-DLNTSSIQQTRKNMKSGHAIEHSNLITKKTMSEPSQ 1176
Query: 1302 -DVKDTGLTLNPMSGETNGKKHQASHCVSRIHPRRSSSVFTASRDLASSTRTTCTTRPRT 1360
+ T LN +G K+Q+ + + P S FT S+ ASS + +PRT
Sbjct: 1177 VSSRVTTQALNSYRFGLSGTKNQSGSVIPKTFPGHS---FTFSKASASSPHVS---KPRT 1230
Query: 1361 WHRTES---SSASPAPGNKSLLPPQNQLPKKVAKYQSMSYIRKGNSLVRKPAPVAAVSQI 1417
W RT + +S + +PP+ + + +Q+ SY+RKGNSLVRKP PV+ + QI
Sbjct: 1231 WLRTGNIPPTSVLRIKPSVETVPPKRPILETKGNFQNTSYVRKGNSLVRKPTPVSTLPQI 1290
Query: 1418 SHGLTSSVYWLNSSGIGESKKTRGSEGGADVVDPPSFLR--GVNAPLERPRTPPLPVVAK 1475
S SV +S GI E K+ S AD D P +L+ +NAP +R TPPLP+ K
Sbjct: 1291 S-----SVNQTSSLGIDEIPKSIKSGRRADGTDKPMYLKTGAINAPQQR--TPPLPIDTK 1343
Query: 1476 VPNHATSSTGDYTSSPVAEPLPNGCSETKSDTQKLMEI-NDELNFSNAALNISKTPVNQT 1534
+ + +SS + EP GC E SD +K +E N N S AL +TP NQ+
Sbjct: 1344 LEENRSSS--------LVEPPSGGCCENASDVRKFIETDNIAPNSSEDALKHCETPENQS 1395
Query: 1535 GSVNGLESQGELNDGTLCTSNVKRITYLKRKSNQLIAASNGCSLSVQNPDKTQSTASDGY 1594
G + ESQGE NDG + N KRI Y+K K+NQL+A SN +SV D Q+ SDGY
Sbjct: 1396 GPSDNGESQGEANDGNVFPLNTKRIVYIKPKTNQLVATSNSYDVSVSTDDNLQTAFSDGY 1455
Query: 1595 YKRRKNQLIRTPLESHINQTVSLADGSFTSEGEKCAKDIF-RRSDMSQSYKAVKKICKPI 1653
YKRRKNQL+RT +ESHINQTV++ + + S+G+ + + RR +++K + K
Sbjct: 1456 YKRRKNQLVRTTIESHINQTVAMPNNTANSDGQGTSNALCNRRFSKKRTHKVGRSSFKRS 1515
Query: 1654 RFSLVWTLNSMQSSKSDDHFLYRGKVLPSLFPWKRTLYWRRFVQDPVSISNNSSLSAISR 1713
R SLVWTL S SS++D + + LP LFPWKR + S+S S + S+
Sbjct: 1516 RASLVWTLCSKNSSENDRDSRHYQRALPLLFPWKRAAFASSLNN--SSLSAISLCLSFSK 1573
Query: 1714 KLLLLRKRDTVYTRSNHGFSLRKYKVLSVGGSSLKWSKSIENRSKKVNEEATLAVAAVEK 1773
KLL LRKRDTVYTRS HGFSLRK +VL VGG SLKWSKSIE SK NEEATLAVAAVE+
Sbjct: 1574 KLLQLRKRDTVYTRSIHGFSLRKSRVLGVGGCSLKWSKSIEKNSKLANEEATLAVAAVER 1633
Query: 1774 KRQENGAESFASETKIRIRSCRERIFRIGSVRYKMDSSRRTLQRISDDSSPCAAGPTLEK 1833
K++E S + ERIFRIGSVRY+MD SRRTLQRISDD S +A
Sbjct: 1634 KKREQKNAVCISSLSKTVDCAGERIFRIGSVRYRMDPSRRTLQRISDDESLSSASTCSGL 1693
Query: 1834 NAKKSYIPRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKY 1893
+K++YIPRRLVIGNDEYVRIGNGNQLIRDPK+R R LA+EKVRWSLHTAR RLARK+KY
Sbjct: 1694 ASKRAYIPRRLVIGNDEYVRIGNGNQLIRDPKKRTRKLANEKVRWSLHTARQRLARKQKY 1753
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFL 1953
CQFFTRFGKCNKD GKCPYIHDPSKIAVCTKFL GLCS +CKLTHKVIPERMPDCSYFL
Sbjct: 1754 CQFFTRFGKCNKDGGKCPYIHDPSKIAVCTKFLNGLCSTPNCKLTHKVIPERMPDCSYFL 1813
Query: 1954 QGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALGAKC 2013
QGLC+N+NCPYRHV+VNP AS CEGFLKGYCADG+ECRKKHSYVCPTF+ TG+C G KC
Sbjct: 1814 QGLCSNRNCPYRHVNVNPKASICEGFLKGYCADGNECRKKHSYVCPTFEETGTCTQGTKC 1873
Query: 2014 RLHHPKSRSNGKKSRRSRKPKNTHGRYFGSMLVEDSESQTAMSERPTVQNNGNLFVEGKL 2073
+LHHPK +S GKK +R+ N+ GRYFGS+ SES ++ + Q +G L E +L
Sbjct: 1874 KLHHPKKQSKGKKRKRTAYQNNSRGRYFGSIPANVSESGMMLAPKRHRQ-SGEL--EEEL 1930
Query: 2074 VDYIGLDVSDKEAGETNDALHELLDFNDSGASELQLDDLDELIKPIRIMNS 2124
DYI LD ++E +T D E F D+ + +LQLDD DELIKP+ ++ +
Sbjct: 1931 SDYISLDDVNEEVLDTVDQSFEPATFCDNDSLDLQLDDFDELIKPVLLLKT 1981
Score = 94.4 bits (233), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 100/161 (62%), Gaps = 25/161 (15%)
Query: 275 GRYGNNRG-SRE--HSYEYNRTP-RKQVQKKSALLRIQ--KPYYRNRDDGE-----LHHS 323
GRY +RG SRE H++E+ RTP +KQVQKKSALLRIQ KP +R+ L +
Sbjct: 238 GRY--SRGNSRECGHTHEFARTPPKKQVQKKSALLRIQTVKPNNNHRNRDNREVEPLRYP 295
Query: 324 NY--EIKSGSFRGKDQVVFSDRDVGEHEQREGSPVELDVSFKSNSLV--AKAIVATSSSA 379
Y E +G +RGK+Q + E E+REGSPVE+D+SF+SNSLV AKAIVA SS
Sbjct: 296 GYGSECSNGFYRGKEQYLGHGVKGDEREEREGSPVEIDISFESNSLVAKAKAIVAPPSSL 355
Query: 380 I-VSDANLTP-------KKGNTRKIVMSNKDHSSLQMNKPL 412
+ V D N+ P G ++++ ++ D+S LQ+ +P+
Sbjct: 356 VSVPDLNVMPIADSDLVYGGRSKRVSGTDGDYSGLQLQQPV 396
>gi|225459673|ref|XP_002284626.1| PREDICTED: uncharacterized protein LOC100262507 [Vitis vinifera]
Length = 2260
Score = 756 bits (1951), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 600/1623 (36%), Positives = 856/1623 (52%), Gaps = 133/1623 (8%)
Query: 80 HRISINDDRLQQHQQTDRRHHHHRQHPVADFEARQDVWDRHPR----IQPDHRPVVSRLD 135
HR+S N L + R HH P +R +R PR I+ DH +R
Sbjct: 111 HRVS-NRTLLDDDRHRLRVHHFDNSRPEFWDPSRVSTENRPPRLYHVIRSDHETSHNR-- 167
Query: 136 RHHEFDHRPLSPYRSMDKIKHELDTTSYRFRERYSNDVVQFEHT---------GSNNSNQ 186
F+H P+SP+R++ + +H+ + +S RFR+ + FEH G S+
Sbjct: 168 ---SFNHNPVSPFRAIGEFRHDPEGSS-RFRDELNGG---FEHKRVEELVWGRGEGRSHD 220
Query: 187 RVDFVSHRSQ---------------FVSTSDRLNSSNYDNQHGSQFDSNEL-------MS 224
D SH Q FV D + NYD+++GS D + +S
Sbjct: 221 DFDRHSHLVQNANKSLRNIGFGDSHFVVEPDSSSLGNYDSRYGSSRDEEFIRNGRGDGVS 280
Query: 225 NNVRDVGLNRPVFKERESRDSLLGRGSNSENSGDGVRAFSGKREFYASDAGRYGNNRGSR 284
N R +P +R++ + L+G +N + G GV+ FS KR A + G++ NRGSR
Sbjct: 281 ENQRWAHSRQP---QRDAANYLIGLENNEIDDGGGVQVFSFKRGPNALELGKF-TNRGSR 336
Query: 285 EHSYEYNRTPRKQVQKKSALLRIQ--KPYYRNRDDGELHHSNYEIKSGSFRGKDQVVFSD 342
E S+E+ R+PRK++QKKSALLRIQ KP R RDDG+ ++ E S +RGK+ + + D
Sbjct: 337 EGSHEFTRSPRKKIQKKSALLRIQLQKPSPRKRDDGQFYYD--ESTSSQYRGKEPLEYLD 394
Query: 343 RDVGEHEQREGSPVELDVSFKSNSLVAKAIVATSSSAIVSDANL--TPKKGNTRKIVMSN 400
G ++RE SPVELDVSFKSNSLVAKAI+A SS +VSD NL P+ RKI + N
Sbjct: 395 H--GMADKRERSPVELDVSFKSNSLVAKAIMAPSSPTVVSDRNLCLIPRNRELRKITLPN 452
Query: 401 KDHSSLQMNKPLDSSRKLGGSRDAVNNALVSED---KDSKQAEKKVAPSCANKCDT-NSN 456
D+SS Q+NK + K RD + + + KD KQ ++KV S T +S
Sbjct: 453 MDNSSSQLNKLNEEPVK----RDCLPSVVADPSLCHKDPKQLKEKVTASGLETVQTFSSK 508
Query: 457 PCSSGSNTSPAKITVE-KLKSIVPEKC----GTTKTSALKVAKKKKVAKRVVKKAINPTV 511
PCSSG+N S VE L S+V EK G+ S+ KV KKKKV ++K P
Sbjct: 509 PCSSGTNISLENNRVEGSLNSMVSEKVAASIGSGGMSSPKVTKKKKV----IRKVSIPIS 564
Query: 512 HVSGSQPTEKLDELLKADASTLGAPAASVLKMGVKPSKDKISSAAMASGHLDDLQAYTYE 571
S SQ T+K E A S+ P+A+ K+KI+SA + S + + T
Sbjct: 565 RASNSQLTKKPGE---APGSSTLRPSAASSSNNAAHPKEKITSAGLIS--VTGVNEVTAL 619
Query: 572 ANMSPGTEQVGGSPETAMVSKEVSTDGDSCAPCVTKIKRKRSGSISRLACSSHKETKIDE 631
+ + E + + +S++ TD S CV ++ KR+ SS KET E
Sbjct: 620 SKNNKVNESL-----LSNISEKSVTDTVSGQACVAELTEKRNRLSPPSGFSSQKETNFHE 674
Query: 632 GSVNADGCLHVLNTASNFDKDLTKLLNETNFSDIGGLEGADKHFCHNGHSLLHENSETKE 691
G +N +G +H LN SN +K LT+ NET + DI G+ C NG S+ EN K
Sbjct: 675 GPINTEGSIHDLNVISNSEKGLTRSPNETTYIDIDGISDVSMQICQNGPSVSLENDVLKG 734
Query: 692 YSEPLLREGRNINSDLKSLEEIRRHEVHVNTCSSAHGMNTTTSCNIGLLSSQEKMTDSEV 751
SE +L G N+N L SLEE + HE NT +S H +N +S + L+ +QEK++ S++
Sbjct: 735 SSETMLSVGGNVNVCLSSLEETKIHEGLANTNNSVHDLNIGSSSDCDLIKTQEKISTSDI 794
Query: 752 GILNASSKQPCKGQMSSSVNSSTVEGCPSVMLPGRCEISAFSSSEETDFHNASTHVDHSN 811
G + A S+ PC +S +E L G + S +E H +VD S+
Sbjct: 795 GTVGAVSRHPCSNHVSV-----LLENPRPFSLGGNASVPVLCS-KENKTHEGPLNVDGSS 848
Query: 812 GDKGSCSGSDRVIINSE----EINPGTGDYNGRQLATNEVTIAIEGGHAGGLANTMFSVG 867
G+ SD + S+ N G D G+QL+ + V +++E G A M S+G
Sbjct: 849 NRTGTALTSDHGLTKSQVKITASNTGIVDDAGKQLSQDGVIMSVENGAIERPAKDMASMG 908
Query: 868 SREFGMSNNTD-------KCKVMTSVSDFPDAMVSDMDTGPVKAFSSVQSLNTALSVKDS 920
+ + D K K+ TS SD + + + P+ +S ++ LS
Sbjct: 909 G-NLNVDSGKDYTPKGKKKRKIRTSQSDLSHS--AKVHVKPLNVITSRHDVDATLSCSMK 965
Query: 921 FPVEVRVTEG-LDVGLQSSSDGLSVFRGHNSTGGCSEANVS---ESSGLNGSSPENRKRR 976
P G L VG ++ D +SV G++S SEA VS G NG+SP+ +KRR
Sbjct: 966 DPSLANSYVGSLKVGSEACEDRVSVLHGNSSMKDLSEAKVSFRDVDVGQNGTSPKLKKRR 1025
Query: 977 KVSANHPGFTSEIVPQISEGPVTPDLSTSGVELPSNSTEGQMHPEEGVAVSNMDTLCDSS 1036
K PGF+S + P+I + + PD ST G E+PSNS + EE V VS + T+ +
Sbjct: 1026 KGFVPDPGFSSPMGPEIHKESLIPDASTIGPEVPSNSNDCLTQSEEQVPVSGI-TMSATG 1084
Query: 1037 LPPCPDGITVLLDSGSAQISSEVAVSVHTNASGFGDDSLKVEPCIVEPSLAFGESDNANV 1096
L PC +G TVL ++ + + + E SV GDDS + ++PS+ E ++
Sbjct: 1085 LQPCLEGNTVLPENRTTRGNFEAMSSV-------GDDSSANDMKFLQPSVIVEELAIPSL 1137
Query: 1097 RTTCPPGSEGKQIVNEDPVVDGTNYNNEDMCTEKSKMENIEAFVVEEQVKACNVTTEF-V 1155
+++CP G + I E P + ++ NE M E E I +EE T +
Sbjct: 1138 QSSCPSGLRVELI--ETPGMSSVDHQNEIMGLESGIRERISVHGLEEPGMLRRGTADCKS 1195
Query: 1156 TPEHQSSDLNKILPATDVESDCCLLERGDLSRA---YRALVADGDGVSTTNSYDEMMEF- 1211
T ++ DLN+ +T +E D L + D Y ++ ADG+GVS TNS DE+M+
Sbjct: 1196 TAALETLDLNRRQLSTGMECDTHTLMKDDKQPTVSNYLSIAADGNGVSPTNSNDELMQSL 1255
Query: 1212 -DSISELGSPEILSTVPVMNALNHEASASQISNEKVCRIEKIPSEEPVDEGFFNLSAHTS 1270
D++S + SPE L +P ++ L+ E S QIS++K C ++ E+P+ + L AH S
Sbjct: 1256 PDTLSNMASPETLPLIPGLHTLDTELSVEQISDQKGCGDDRKSDEKPMVDCGSVLFAHNS 1315
Query: 1271 PSEHAKINLKLDDMLESAHLVAQRTVSLPAQDVKDTGLTLNPMSGETNGKKHQASHCVSR 1330
S+ ++ N KLDD + S + + +TV +QD K T ++N +SGE NG K+ ++ V R
Sbjct: 1316 CSQSSESNFKLDDAIGSDNSINGKTVQPSSQDTKRTTHSVNLISGELNGSKNHLNNLVPR 1375
Query: 1331 IHPRRSSSVFTASRDLASSTRTTCTTRPRTWHRTESSSASPAPGNKSLLPPQNQLPKKVA 1390
+ P SS S+ ASST +PRTW+RT +SS+S PPQ QL KK+
Sbjct: 1376 VFPAPSSFFLANSKKTASSTHIA---KPRTWYRTGASSSSLKKPLSIAFPPQRQL-KKIG 1431
Query: 1391 KYQSMSYIRKGNSLVRKPAPVAAVSQISHGLTSSVYWLNSSGIGESKKTRGSEGGADVVD 1450
K Q SYIRKGNSLVRKPAPVA + Q SHGL+SSVY LN SG+ E +K GSE DV+D
Sbjct: 1432 KVQGTSYIRKGNSLVRKPAPVAVIPQGSHGLSSSVYRLNPSGVDEMRKRTGSESRTDVID 1491
Query: 1451 PP--SFLRGVNAPLERPRTPPLPVVAKVPNHATSSTGDYTSSPVAEPLPNGCSETKSDTQ 1508
P S +AP ERP+TPPLP K+P T S+GD T+SP+ +PL NGCS D
Sbjct: 1492 PSNRSSTGATDAPSERPQTPPLPYSTKLPKCTTISSGDCTTSPLVDPLLNGCSGNMPDPA 1551
Query: 1509 KLMEINDELNFSNAALNISKTPVNQTGSVNGLESQGELNDGTLCTSNVKRITYLKRKSNQ 1568
+ +++ ++ + A + T NQTG +N LESQ LNDG +S +KR+TY+KRKSNQ
Sbjct: 1552 ENIKV--PMSSEDGAKSSGSTE-NQTGLINNLESQSVLNDGNSESSKLKRVTYVKRKSNQ 1608
Query: 1569 LIAASNGCSLSVQNPDKTQSTASDGYYKRRKNQLIRTPLESHINQTVSLADGSFTSEGEK 1628
L+AASN +SVQN DKT + +SDGYYKRRKNQLIRT LESHI QTV++ D SEG++
Sbjct: 1609 LVAASNPHDMSVQNADKTPALSSDGYYKRRKNQLIRTSLESHIKQTVAIPDDGSNSEGQR 1668
Query: 1629 CAK 1631
K
Sbjct: 1669 PPK 1671
Score = 697 bits (1800), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/480 (70%), Positives = 389/480 (81%), Gaps = 4/480 (0%)
Query: 1646 VKKICKPIRFSLVWTLNSMQSSKSDDHFLYRGKVLPSLFPWKRTLYWRRFVQDPVSISNN 1705
+ K +P +FSLVWTL QSS+ D + ++ VLPSLFPWKR YWR F+ +P SI N+
Sbjct: 1778 LSKTREPSKFSLVWTLRGAQSSEKDGNSVHSQGVLPSLFPWKRATYWRSFMHNPASIPNS 1837
Query: 1706 SSLSAISRKLLLLRKRDTVYTRSNHGFSLRKYKVLSVGGSSLKWSKSIENRSKKVNEEAT 1765
+SLS I RKLLLLRKRDTVYTRS GFSLRK KVL VGGSSLKWSKSIE +SKK NEEAT
Sbjct: 1838 TSLSMI-RKLLLLRKRDTVYTRSTGGFSLRKSKVLGVGGSSLKWSKSIERQSKKANEEAT 1896
Query: 1766 LAVAAVE-KKRQENGAESFASETKIRIRSCRERIFRIGSVRYKMDSSRRTLQRISDDSSP 1824
LAVAAVE KKR++NGA S SET+ R S RERIFR+GSVRYKMDSSRRTLQRISD S
Sbjct: 1897 LAVAAVERKKREQNGAASVISETESRNHSSRERIFRVGSVRYKMDSSRRTLQRISDGDST 1956
Query: 1825 CAAGPTLEKNAKKSYIPRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTAR 1884
C+A EKNAKK YIPRRL+IGNDEYV+IGNGNQLIR+PK+R R+LASEKVRWSLHTAR
Sbjct: 1957 CSAALQSEKNAKKPYIPRRLLIGNDEYVQIGNGNQLIRNPKKRTRILASEKVRWSLHTAR 2016
Query: 1885 LRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPE 1944
LRLA+K KYCQFFTRFGKCNKD+GKCPYIHDPSKIAVCTKFL GLCSN +CKLTHKVIPE
Sbjct: 2017 LRLAKKWKYCQFFTRFGKCNKDDGKCPYIHDPSKIAVCTKFLNGLCSNPNCKLTHKVIPE 2076
Query: 1945 RMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKAT 2004
RMPDCSYFLQGLC N++CPYRHV+VNPNAS CEGFL+GYCADG+ECRKKHSYVCP F+AT
Sbjct: 2077 RMPDCSYFLQGLCNNESCPYRHVNVNPNASVCEGFLRGYCADGNECRKKHSYVCPIFEAT 2136
Query: 2005 GSCALGAKCRLHHPKSRSNGKKSRRSRKPKNTHGRYFGSMLVEDSESQTAMSERPTVQNN 2064
GSC LG+KC+LHHPK+RS GKK ++SR+ N GRYFG V + + + +SE+ T +NN
Sbjct: 2137 GSCPLGSKCKLHHPKNRSKGKKKKQSRE-LNAQGRYFGFRHVNNRDPEKVVSEKDTAKNN 2195
Query: 2065 GNL-FVEGKLVDYIGLDVSDKEAGETNDALHELLDFNDSGASELQLDDLDELIKPIRIMN 2123
++ F EG+ DYI LDVSD++ G N + S S L LDDLDELIKP+ IMN
Sbjct: 2196 DDISFQEGRFADYISLDVSDEDIGSINGPRTQQTTLFGSEPSYLHLDDLDELIKPVLIMN 2255
>gi|449444220|ref|XP_004139873.1| PREDICTED: uncharacterized protein LOC101206853 [Cucumis sativus]
Length = 2118
Score = 691 bits (1784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/1174 (40%), Positives = 650/1174 (55%), Gaps = 98/1174 (8%)
Query: 973 RKRRKVSANHPGFTSEIVPQISEGPVTPDLSTSGVELPSNSTEGQMHPEEGVAVSNMDTL 1032
RK++K+ + P + +I++G +S+ +L SN G++ + VAVS +D
Sbjct: 1014 RKKQKICIDSPVLSCP-SGEINDGAAITFISSLSDQLNSN---GELMEGKKVAVSTVDAF 1069
Query: 1033 CDSSL--PPCPDGITVLLDS-GSAQISSEVAVSVHTNASGFGDDSLKVEPCIVEPSLAFG 1089
+S C G++++LD + + + EV + + + L+ PC ++ S
Sbjct: 1070 FTASTVSTDCLKGMSMVLDDIPTKETAIEVNIERNPLECLLKYEQLEKNPCSIQVS---- 1125
Query: 1090 ESDNANVRTTCPPGSEGKQIVNEDPVVDGTNYNNEDMCTEKSKMENIEAFVVEEQVKACN 1149
+ + P +Q V ++ ++ D+ T++ K NI A E Q CN
Sbjct: 1126 ---TVSKCQSLSPSLGYEQGVTGATLMATNQSDDMDVVTDRRKELNIHA--AEGQSTICN 1180
Query: 1150 VTTEFVTPEHQSSDLNKILPATDVESDCCLLERGDLSRAYRALVADGDGVSTTNSYDEMM 1209
T ++ +P S ++ L + ES G + + + D G NS E+
Sbjct: 1181 KTEQWDSPSEVPS--SQTLDRPNPESVKSSSNVGQDNLHHIEISFDEKGYPAANSDREIK 1238
Query: 1210 --EFDSISELGSPEILSTVPVMNALNHEASASQISNEKVCRIEKIPSEEPVDEGFFNLSA 1267
FD+ LGS E S VP M+ L+ EAS S ++ C ++ ++ E S
Sbjct: 1239 GSMFDTRGHLGSSEA-SNVPEMHKLSCEASFSHTDSKMDCADDEKVKKKSNVENELKAST 1297
Query: 1268 HTSPSEHAKINLKLDDMLESAHLVAQRTVSLPAQDVKDTGLTLNPMSGETNGKKHQASHC 1327
T S+ ++ KL S ++++ + A + GL + S + K+ + S+
Sbjct: 1298 DTPFSQPLAVHRKLG-CTNSVNILSTGNILPQALEALKNGLQADNNSSNSCKKEQKMSYY 1356
Query: 1328 VSRIHPRRSSSVFTASRDLASSTRTTCTTRPRTWHRTESSSASPAPGNK---SLLPPQNQ 1384
S+ P +S S + AS++L S+ + +PR+WHR +S SPA GNK S +PPQ Q
Sbjct: 1357 KSQAFPAKSFSTYPASKNLTSAAYSK---KPRSWHRN-VNSPSPALGNKPSLSSIPPQGQ 1412
Query: 1385 LPKKVAKYQSMSYIRKGNSLVRKPAPVAA-----VSQISHGLTSSVYWLNSSGIGESKKT 1439
L QS SYIRKGNSLVRKP+PV A S L W G+ + K
Sbjct: 1413 LHGGGGMLQSTSYIRKGNSLVRKPSPVGARVLGSHDLSSSSLDQHDCW---PGVKSNNKV 1469
Query: 1440 RGSEGGADVVDPPSFLRGVNAPLERPRTPPLPVVAKVPNHATSSTGDYTSSPVAEPLPNG 1499
+ S RG +A + + P L ++ PN+ S PV + P+
Sbjct: 1470 EVTNSCFH-----SKARGTDANVYKTYPPRLSSGSESPNY---------SVPVGDCAPSP 1515
Query: 1500 CSETKSDTQKLMEINDELNFSNAALNISKTPVNQTGSVNGLESQGELNDGTLCTSNVKRI 1559
C ET+S+ K ++D +L I P +Q + + E+ E+ + + +K++
Sbjct: 1516 CHETESNLMKSKHVSDLSKSVGDSLKILPAPKSQVVTADKKENLAEMKNTNSVSLVLKKM 1575
Query: 1560 TYLKRKSNQLIAASNGCSLSVQNPDKTQSTASDGYYKRRKNQLIRTPLESHINQTVSLAD 1619
Y+KRKSNQL+A SN C LS +N + T S SDGYYKR+KNQLIR P E QT+ +
Sbjct: 1576 VYVKRKSNQLVATSNPCDLSTKNSETTCSLGSDGYYKRKKNQLIRAPSECQTKQTLLPTE 1635
Query: 1620 -----GSFTSEGEKCAKDIFRRSDMSQSYKAVKKICKPIRFSLVWTLNSMQSSKSDDHFL 1674
G+ +S G+ A++ +R + +KA+ + P + SLVWTL S ++ + L
Sbjct: 1636 DISKPGAQSSYGDGDARNFNKR----RQFKALLETHGPSKSSLVWTLCSSVAAGNGAGNL 1691
Query: 1675 YRGKVLPSLFPWKRTLYWRRFVQDPVSISNNSSLSAISRKLLLLRKRDTVYTRSNHGFSL 1734
K+ P LFPWKRT YW+ F ++ S + S I RKLLLLR R+TVY RS HGFSL
Sbjct: 1692 QNHKMAPRLFPWKRT-YWKMF---KLNASTQRNSSTIVRKLLLLRNRNTVYKRSKHGFSL 1747
Query: 1735 RKYKVLSVGGSSLKWSKSIENRSKKVNEEATLAVA-AVEKKRQENGAESFASETKIRIRS 1793
RK KVLSVG SSLKWSKSIE SKK NEEAT AVA A KKR+ N S +S+T
Sbjct: 1748 RKSKVLSVGRSSLKWSKSIEKHSKKANEEATRAVADADRKKRERNWDPSVSSDT------ 1801
Query: 1794 CRERIFRIGSVRYKMDSSRRTLQRISDDSSPCAAGPTL---EKNAKKSYIPRRLVIGNDE 1850
+G ++ D A+G T +AKK YIP RLVIGNDE
Sbjct: 1802 -------LGGSQFSYDQ---------------ASGSTTFQPRTSAKKFYIPARLVIGNDE 1839
Query: 1851 YVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRFGKCNKDNGKC 1910
YV+IG GNQL+R+PKRRAR+LASEK+RWSLHTAR RLA+KR YCQFFTRFGKCNKD GKC
Sbjct: 1840 YVKIGKGNQLVRNPKRRARILASEKIRWSLHTARQRLAKKRMYCQFFTRFGKCNKDGGKC 1899
Query: 1911 PYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVN 1970
PYIHD SKIAVCTKFL GLCSN+ CKLTHKVIPERMPDCSYFLQGLC++KNC YRHV+VN
Sbjct: 1900 PYIHDTSKIAVCTKFLNGLCSNASCKLTHKVIPERMPDCSYFLQGLCSSKNCAYRHVNVN 1959
Query: 1971 PNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRS 2030
TCE FL+GYCA G+ECRKKHSYVCP +ATG+C + C+LHHPK ++ G+K +R
Sbjct: 1960 SKVPTCEAFLRGYCALGNECRKKHSYVCPLLEATGTCPDRSTCKLHHPKRQTKGRKRKRL 2019
Query: 2031 RKPKNTHGRYFGSMLVEDSESQTAMSERPTVQNNGNLFVEGKLVDYIGLDV-SDKEAGET 2089
N GRYFGS + S S+ +SE+ + + F+E L DYI LDV SD++ E+
Sbjct: 2020 EGRNNDQGRYFGSTNQDVSRSRLVVSEKQLPVKSSDPFLE-DLTDYISLDVGSDEDIEES 2078
Query: 2090 NDALHELLDFNDSGASELQLDDLDELIKPIRIMN 2123
D+ + F+ SEL L+D DELIKPIR+MN
Sbjct: 2079 RDSTSQTTSFSQGYLSELLLEDPDELIKPIRVMN 2112
Score = 112 bits (280), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 115/359 (32%), Positives = 165/359 (45%), Gaps = 46/359 (12%)
Query: 59 NFSPNPKPQNQYHHQRSNDFAHRISINDDRLQQHQQTDRRHHHHRQHPVADFEARQDVWD 118
N P P + QRS + RIS D D H +H ++R DV D
Sbjct: 104 NDDPFRSPPRRREFQRSPPLSGRISF--DGGFHRDFVDLNHPYH--------DSRFDVSD 153
Query: 119 RHPRIQPDHRPVV--SRLDRHH-----EFDHRPLSPYRSMDKIKHELDTTSYR------- 164
R+ D+RP + S +D H E DHR PY D ++ S R
Sbjct: 154 PS-RVTVDNRPPLPHSPIDFEHGMGHREIDHRSGIPYPPPDMFRYNSGNCSRRGADYDDS 212
Query: 165 ---------FRERYSNDVVQFEHTGSNNSNQRVDFVSHRSQFVSTSDRLNSSNYD-NQHG 214
R R + +H +++ ++ + RS + D+ S ++D +++G
Sbjct: 213 YQPNPREEVLRGRGEENYCHHDHHKEDSNISFMECGASRSPL--SRDKFTSGSFDKHRYG 270
Query: 215 SQFDSNELMSN-NVRDVGLNRPVFKERES----RDSLLGRGSNSENSGDGVRAFSGKREF 269
S ++ S N VG N+ +++ +S L ++ R SGK
Sbjct: 271 SNYEKESFRSRRNGNVVGKNQRWVHSKQTFRNMHNSYLDGSNDRHGDRTDFRNISGKHGH 330
Query: 270 YASDAGRYG-NNRGSREHSYEYNRTPRKQVQKKSALLRIQ--KPYYRNRDDGELHHSNY- 325
++ G+Y +N+G E EY TPRKQVQKKSA LRIQ P + NR+ +L S Y
Sbjct: 331 SNAELGKYYYDNKGGMEGYNEYTSTPRKQVQKKSAFLRIQMANPCHSNRESEQLRDSEYF 390
Query: 326 EIKSGSFRGKDQVVFSDRDVGEHEQREGSPVELDVSFKSNSLVAKAIVATSSSAIVSDA 384
+ KS RGK QV + ++REGSP+ELDVSFKSNSLVAKAIVA + S +SD
Sbjct: 391 DEKSSFLRGKSQVRSLCYRMDSGKKREGSPMELDVSFKSNSLVAKAIVAPTQSTPISDV 449
>gi|449492653|ref|XP_004159062.1| PREDICTED: uncharacterized protein LOC101224393 [Cucumis sativus]
Length = 1341
Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/1182 (39%), Positives = 652/1182 (55%), Gaps = 106/1182 (8%)
Query: 969 SPENRKRRKVSANHPGFTSEIVP----QISEGPVTPDLSTSGVELPSNSTEGQMHPEEGV 1024
S + RK++K+ + P ++P +I++G +S+ +L SN G++ + V
Sbjct: 233 SLKTRKKQKICIDSP-----VLPCHSGEINDGAAITFISSLSDQLNSN---GELMEGKKV 284
Query: 1025 AVSNMDTLCDSSL--PPCPDGITVLLDS-GSAQISSEVAVSVHTNASGFGDDSLKVEPCI 1081
AVS +D +S C G++++LD + + + EV + + + L+ C
Sbjct: 285 AVSTVDAFFTASTVSTDCLKGMSMVLDDIPTKETAIEVNIERNPLECLLKYEQLEKNSCS 344
Query: 1082 VEPSLAFGESDNANVRTTCPPGSEGKQIVNEDPVVDGTNYNNEDMCTEKSKMENIEAFVV 1141
++ S + + P +Q V ++ ++ D+ T++ K NI A
Sbjct: 345 IQVS-------TVSKCQSLSPSLGYEQGVTGATLMATNQSDDMDVVTDRRKELNIHA--A 395
Query: 1142 EEQVKACNVTTEFVTPEHQSSDLNKILPATDVESDCCLLERGDLSRAYRALVADGDGVST 1201
E Q CN T ++ +P S ++ L + ES G + + + D G
Sbjct: 396 EGQSTICNKTEQWDSPSEVPS--SQTLDRPNPESVKSSSNVGQDNLHHIEISFDEKGYPA 453
Query: 1202 TNSYDEMM--EFDSISELGSPEILSTVPVMNALNHEASASQISNEKVCRIEKIPSEEPVD 1259
NS E+ FD+ LGS E S VP M+ L+ EAS S ++ C ++ ++
Sbjct: 454 ANSDREIKGSMFDTRGHLGSSEA-SNVPEMHKLSCEASFSHTDSKMDCADDEKVKKKSNV 512
Query: 1260 EGFFNLSAHTSPSEHAKINLKLDDMLESAHLVAQRTVSLPAQDVKDTGLTLNPMSGETNG 1319
E S T S+ ++ KL S ++++ + A + GL + S +
Sbjct: 513 ENELKASTDTPFSQPLAVHRKLG-CTNSVNILSTGNILPQALEALKNGLQADNNSSNSCK 571
Query: 1320 KKHQASHCVSRIHPRRSSSVFTASRDLASSTRTTCTTRPRTWHRTESSSASPAPGNK--- 1376
K+ + S+ S+ P +S S + AS++L S+ + +PR+WHR +S SPA GNK
Sbjct: 572 KEQKMSYYKSQAFPAKSFSTYPASKNLTSAAYSK---KPRSWHRN-VNSPSPALGNKPSL 627
Query: 1377 SLLPPQNQLPKKVAKYQSMSYIRKGNSLVRKPAPVAA-----VSQISHGLTSSVYWLNSS 1431
S +PPQ QL QS SYIRKGNSLVRKP+PV A S L W
Sbjct: 628 SSIPPQGQLHGGGGMLQSTSYIRKGNSLVRKPSPVGARVLGSHDLSSSSLDQHDCW---P 684
Query: 1432 GIGESKKTRGSEGGADVVDPPSFLRGVNAPLERPRTPPLPVVAKVPNHATSSTGDYTSSP 1491
G+ + K + S RG +A + + P L ++ PN+ S P
Sbjct: 685 GVKSNNKVEVTNSCFH-----SKARGTDANVCKTYPPRLSSGSESPNY---------SVP 730
Query: 1492 VAEPLPNGCSETKSDTQKLMEINDELNFSNAALNISKTPVNQTGSVNGLESQGELNDGTL 1551
V + P+ C ET+S+ K ++D +L I P +Q + + E+ E+ +
Sbjct: 731 VGDCAPSPCHETESNLMKSKHVSDLSKSVGDSLKILPAPKSQVVTADKKENLAEMKNTNS 790
Query: 1552 CTSNVKRITYLKRKSNQLIAASNGCSLSVQNPDKTQSTASDGYYKRRKNQLIRTPLESHI 1611
+ +K++ Y+KRKSNQL+A SN C LS +N + T S SDGYYKR+KNQLIR P E
Sbjct: 791 VSLVLKKMVYVKRKSNQLVATSNPCDLSTKNSETTCSLGSDGYYKRKKNQLIRAPSECQT 850
Query: 1612 NQTVSLAD-----GSFTSEGEKCAKDIFRRSDMSQSYKAVKKICKPIRFSLVWTLNSMQS 1666
QT+ + G+ +S G+ A++ +R + +KA+ + P + SLVWTL S +
Sbjct: 851 KQTLLPTEDISKPGAQSSYGDGDARNFNKR----RQFKALLETHGPSKSSLVWTLCSSVA 906
Query: 1667 SKSDDHFLYRGKVLPSLFPWKRTLYWRRFVQDPVSISNNSSLSAISRKLLLLRKRDTVYT 1726
+ + L K+ P LFPWKRT YW+ F ++ S + S I RKLLLLR R+TVY
Sbjct: 907 AGNGAGNLQNHKMAPRLFPWKRT-YWKMF---KLNASTQRNSSTIVRKLLLLRNRNTVYK 962
Query: 1727 RSNHGFSLRKYKVLSVGGSSLKWSKSIENRSKKVNEEATLAVA-AVEKKRQENGAESFAS 1785
RS HGFSLRK KVLSVG SSLKWSKSIE SKK NEEAT AVA A KKR+ N S +S
Sbjct: 963 RSKHGFSLRKSKVLSVGRSSLKWSKSIEKHSKKANEEATRAVADADRKKRERNWDPSVSS 1022
Query: 1786 ETKIRIRSCRERIFRIGSVRYKMDSSRRTLQRISDDSSPCAAGPTL---EKNAKKSYIPR 1842
+T +G ++ D A+G T +AKK YIP
Sbjct: 1023 DT-------------LGGSQFSYDQ---------------ASGSTTFQSRTSAKKFYIPA 1054
Query: 1843 RLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRFGK 1902
RLVIGNDEYV+IG GNQL+R+PKRRAR+LASEK+RWSLHTAR RLA+KR YCQFFTRFGK
Sbjct: 1055 RLVIGNDEYVKIGKGNQLVRNPKRRARILASEKIRWSLHTARQRLAKKRMYCQFFTRFGK 1114
Query: 1903 CNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLCTNKNC 1962
CNKD GKCPYIHD SKIAVCTKFL GLCSN+ CKLTHKVIPERMPDCSYFLQGLC++KNC
Sbjct: 1115 CNKDGGKCPYIHDTSKIAVCTKFLNGLCSNASCKLTHKVIPERMPDCSYFLQGLCSSKNC 1174
Query: 1963 PYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRS 2022
YRHV+VN TCE FL+GYCA G+ECRKKHSYVCP +ATG+C + C+LHHPK ++
Sbjct: 1175 AYRHVNVNSKVPTCEAFLRGYCALGNECRKKHSYVCPLLEATGTCPDRSTCKLHHPKRQT 1234
Query: 2023 NGKKSRRSRKPKNTHGRYFGSMLVEDSESQTAMSERPTVQNNGNLFVEGKLVDYIGLDV- 2081
G+K +R N GRYFG + S S+ +SE+ + + F+E L DYI LDV
Sbjct: 1235 KGRKRKRLEGRNNDQGRYFGFTNQDVSRSRLVVSEKQLPVKSSDPFLE-DLTDYISLDVG 1293
Query: 2082 SDKEAGETNDALHELLDFNDSGASELQLDDLDELIKPIRIMN 2123
SD++ E+ D+ + F+ SEL L+D DELIKPIR+MN
Sbjct: 1294 SDEDIEESRDSTSQTTSFSQGYLSELLLEDPDELIKPIRVMN 1335
>gi|334182742|ref|NP_173577.2| zinc finger CCCH domain-containing protein [Arabidopsis thaliana]
gi|332191999|gb|AEE30120.1| zinc finger CCCH domain-containing protein [Arabidopsis thaliana]
Length = 2166
Score = 676 bits (1743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/781 (49%), Positives = 500/781 (64%), Gaps = 46/781 (5%)
Query: 1356 TRPRTWHRTESSSASPAPGNKSL---LPPQNQLPKKVAKYQSMSYIRKGNSLVRKPA--- 1409
T+ TWHR +S S K L L Q + PK A+ + SY+RKGNSL+RKP+
Sbjct: 1417 TKRHTWHRKSDASPSSFVAAKPLSSTLSTQQKFPKVTAQSNN-SYVRKGNSLLRKPSHGS 1475
Query: 1410 PVAAVSQISHGLTSSVYWLNSSGIGESKKTRGSEGGADVVDPPSFLR-GVNAPLERPRTP 1468
P AA+ G+ S LN + + K+ GS DV + S ++ G A LER P
Sbjct: 1476 PGAAL-----GIPPSAIQLNHFTVED--KSTGSSNMVDVDNASSLVKTGEIATLERQSKP 1528
Query: 1469 PL-PVVAKVPNHATSSTGDYTSSPVAEPLPNGCSETKSDTQKLMEINDELNFSNAALNIS 1527
P +K+ N +S+G S + L G E+ D+ + E NF ++ +
Sbjct: 1529 PSDSSTSKLSNAIATSSGKCALSYSTDHLTTGLPESIMDSA----TSGEANFPHSGGDTL 1584
Query: 1528 KT--PVNQTGSVNGLESQGELNDGTLCTSNVKRITYLKRKSNQLIAASNGCSLSVQNPDK 1585
KT + QTG + + Q + N L +SN+KR+ Y+KRK+NQL+AAS+ + + +
Sbjct: 1585 KTSDTLIQTGYAS--DCQQKRNPSDLDSSNLKRMVYVKRKANQLVAASD-----IHDVSQ 1637
Query: 1586 TQSTASDGYYKRRKNQLIRTPLESHINQTVSLADGSFTSEGEKCAKDIF--RRSDMSQSY 1643
Q +SDGY+KR KNQL+R ES NQ++SL D + + + A ++ R S + S
Sbjct: 1638 NQIPSSDGYFKRSKNQLVRNS-ESRCNQSISLPDDALDT---RSAANMVSERPSSSAFSD 1693
Query: 1644 KAVKKICKPIRFSLVWTLNSMQSSKSDDHFLYRGKVLPSLFPWKRTLYWRRFVQDPVSIS 1703
AV + K +FSLVWT N Q H + ++P L PWKR YWRR + +
Sbjct: 1694 SAVMRPFKQSKFSLVWTQNDPQPRMPIAH-MRNQNIVPQLVPWKRVTYWRRLMNSVSAFR 1752
Query: 1704 NNSSLSAISRKLLLLRKRDTVYTRSNHGFSLRKYKVLSVGGSSLKWSKSIENRSKKVNEE 1763
N SSL+ ISRKL ++RKR T+YTRS +G+SLRK KVLSVGGS LKWSKSIE S+K NEE
Sbjct: 1753 NGSSLN-ISRKLSMMRKRHTIYTRSTNGYSLRKSKVLSVGGSHLKWSKSIERDSRKANEE 1811
Query: 1764 ATLAVAAVEKKRQENGAESFASETKIRIRSCRERIFRIGSVRYKMDSSRRTLQRISDDSS 1823
ATLAVAA KK E + + T R RER+FR GS+RYKMDSSRRTLQRISD S
Sbjct: 1812 ATLAVAAYSKKESEKQSGQNNTSTASRNHLARERVFRFGSLRYKMDSSRRTLQRISDVDS 1871
Query: 1824 PCAAGPTLEKNAKKSYIPRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTA 1883
PC+ K K+ +IP+RLVIGN+EYVR GNGNQL+RDPK+R RVLA+EKVRWSLH A
Sbjct: 1872 PCSGPSENGKGVKRPFIPKRLVIGNEEYVRFGNGNQLVRDPKKRTRVLANEKVRWSLHNA 1931
Query: 1884 RLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIP 1943
RLRLA+K+KYCQFFTRFGKCNKD+GKCPY+HDPSKIAVCTKFL GLC+N++CKLTHKVIP
Sbjct: 1932 RLRLAKKKKYCQFFTRFGKCNKDDGKCPYVHDPSKIAVCTKFLNGLCANANCKLTHKVIP 1991
Query: 1944 ERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKA 2003
ERMPDCSY+LQGLC N+ CPYRHVHVNP A C+GFLKGYC++GDECRKKHSY CP F+A
Sbjct: 1992 ERMPDCSYYLQGLCNNEACPYRHVHVNPIAPICDGFLKGYCSEGDECRKKHSYNCPVFEA 2051
Query: 2004 TGSCALGAKCRLHHPKSRSNGKKSRRSRKP--KNTHGRYFGSMLVEDSESQTAMSERPTV 2061
TGSC+ G KC+LHHPK++S G+K +R+ +P KN RYF S+ SES+ + R +
Sbjct: 2052 TGSCSQGLKCKLHHPKNQSKGRKRKRTNEPSQKNARRRYFSSLHNILSESEPMVFNRRST 2111
Query: 2062 QNNGNLFVEGKLVDYIGLDVSDKEAGETNDALHELLDFNDSGASELQLDDLDELIKPIRI 2121
+ +F L D+I L ++ EAG+ ND +DS + L + LI P+ +
Sbjct: 2112 --DSEVFGMESL-DFITLGTAEYEAGDDNDPATVQSISSDSES----LISIYNLITPVAL 2164
Query: 2122 M 2122
M
Sbjct: 2165 M 2165
Score = 107 bits (266), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 95/145 (65%), Gaps = 10/145 (6%)
Query: 266 KREFYASDAGRYGNNRGSREHSYEYNRTPRKQVQKKSALLRIQKPY-YRNRDDGEL---- 320
K ++Y S+ +Y + RG RE S E NRTPRKQVQKKSALLR++ P Y+N + E
Sbjct: 284 KDDYYHSEIEQYFD-RGRREASNELNRTPRKQVQKKSALLRLETPRSYKNSRENEWSRQH 342
Query: 321 -HHSN--YEIKSGSFRGKDQVVFSDRDVGEHEQREGSPVELDVSFKSNSLVAKAIVATSS 377
HH+ S S+RGK+ + SDR + E +QR SPV+LD+SFKSN LVAK + + +S
Sbjct: 343 NHHNGNGKRFNSNSYRGKEHLGHSDRGLVE-KQRGRSPVDLDISFKSNVLVAKPVASPTS 401
Query: 378 SAIVSDANLTPKKGNTRKIVMSNKD 402
+ I S A++TP+ R+ ++S+K+
Sbjct: 402 AGIRSGASVTPRSIKARRALLSDKN 426
>gi|224082348|ref|XP_002306656.1| predicted protein [Populus trichocarpa]
gi|222856105|gb|EEE93652.1| predicted protein [Populus trichocarpa]
Length = 495
Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/492 (67%), Positives = 380/492 (77%), Gaps = 3/492 (0%)
Query: 1633 IFRRSDMSQSYKAVKKICKPIRFSLVWTLNSMQSSKSDDHFLYRGKVLPSLFPWKRTLYW 1692
I + +++ + + K KP +FSLVWTL+ Q SK+D L+ GKVL LFPWKR YW
Sbjct: 5 IIKETEVGYPFAVLTKTRKPSKFSLVWTLHGAQLSKNDGDSLHYGKVLSHLFPWKRATYW 64
Query: 1693 RRFVQDPVSISNNSSLSAISRKLLLLRKRDTVYTRSNHGFSLRKYKVLSVGGSSLKWSKS 1752
R F+ P SISN+SSLS+I RKLLLLRKR+TVYTRS HGFSLRK KVLS GGSSLKWSKS
Sbjct: 65 RSFLPKPSSISNHSSLSSIGRKLLLLRKRNTVYTRSKHGFSLRKSKVLSFGGSSLKWSKS 124
Query: 1753 IENRSKKVNEEATLAVAAVEKK-RQENGAESFASETKIRIRSCRERIFRIGSVRYKMDSS 1811
IE SKK NEEATLAVAAVE+K R+ GA AS TK R S RERIFR+G VRYKMDSS
Sbjct: 125 IERYSKKANEEATLAVAAVERKNRERRGAAHVASPTKSRNSSSRERIFRVGLVRYKMDSS 184
Query: 1812 RRTLQRISDDSSPCAAGPTLEKNAKKSYIPRRLVIGNDEYVRIGNGNQLIRDPKRRARVL 1871
+RTLQRIS D S C+ EK+AKKSY+PRRL+IG DEYVRIGNGNQLIRDPK+R R+L
Sbjct: 185 KRTLQRISGDESSCSGALQKEKDAKKSYVPRRLMIGKDEYVRIGNGNQLIRDPKKRTRIL 244
Query: 1872 ASEKVRWSLHTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCS 1931
ASEKVRWSLHTAR RLARKRKYCQFF+RFGKCNKD+GKCP+IHD SKIAVCTKFL GLC
Sbjct: 245 ASEKVRWSLHTARSRLARKRKYCQFFSRFGKCNKDDGKCPFIHDSSKIAVCTKFLNGLCF 304
Query: 1932 NSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECR 1991
N +CKLTHKVIPERMPDCSYFLQGLCTNK+CPYRHV VNPNAS CEGFL+GYCAD +EC
Sbjct: 305 NPECKLTHKVIPERMPDCSYFLQGLCTNKDCPYRHVRVNPNASICEGFLRGYCADVNECL 364
Query: 1992 KKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSRKPKNTHGRYFGSMLVEDSES 2051
KKHSYVCPT++ATGSC G+KC+LHHPK+RS KKS+RSR N GRYFG M +E
Sbjct: 365 KKHSYVCPTYEATGSCPQGSKCKLHHPKNRSKEKKSKRSRD-NNAQGRYFGLMHASTTEL 423
Query: 2052 QTAMSERPTVQNNGNLFVEGKLVDYIGLDVSDKEAGETNDALHELLDFNDSGASELQLDD 2111
+ + + V +N + +G + DYI LDV D E E E DS ELQL D
Sbjct: 424 RNPVPGKLNVLDNDAISFKGSIADYISLDVID-EVVENTIPADEHTALGDSDPLELQLGD 482
Query: 2112 LDELIKPIRIMN 2123
LDELIKP+RIMN
Sbjct: 483 LDELIKPVRIMN 494
>gi|122215547|sp|Q3ED78.1|C3H7_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 7;
Short=AtC3H7; AltName: Full=AtSmicl
gi|134031900|gb|ABO45687.1| At1g21570 [Arabidopsis thaliana]
Length = 470
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 281/471 (59%), Positives = 342/471 (72%), Gaps = 11/471 (2%)
Query: 1654 RFSLVWTLNSMQSSKSDDHFLYRGKVLPSLFPWKRTLYWRRFVQDPVSISNNSSLSAISR 1713
+FSLVWT N Q H + ++P L PWKR YWRR + + N SSL+ ISR
Sbjct: 8 KFSLVWTQNDPQPRMPIAH-MRNQNIVPQLVPWKRVTYWRRLMNSVSAFRNGSSLN-ISR 65
Query: 1714 KLLLLRKRDTVYTRSNHGFSLRKYKVLSVGGSSLKWSKSIENRSKKVNEEATLAVAAVEK 1773
KL ++RKR T+YTRS +G+SLRK KVLSVGGS LKWSKSIE S+K NEEATLAVAA K
Sbjct: 66 KLSMMRKRHTIYTRSTNGYSLRKSKVLSVGGSHLKWSKSIERDSRKANEEATLAVAAYSK 125
Query: 1774 KRQENGAESFASETKIRIRSCRERIFRIGSVRYKMDSSRRTLQRISDDSSPCAAGPTLEK 1833
K E + + T R RER+FR GS+RYKMDSSRRTLQRISD SPC+ K
Sbjct: 126 KESEKQSGQNNTSTASRNHLARERVFRFGSLRYKMDSSRRTLQRISDVDSPCSGPSENGK 185
Query: 1834 NAKKSYIPRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKY 1893
K+ +IP+RLVIGN+EYVR GNGNQL+RDPK+R RVLA+EKVRWSLH ARLRLA+K+KY
Sbjct: 186 GVKRPFIPKRLVIGNEEYVRFGNGNQLVRDPKKRTRVLANEKVRWSLHNARLRLAKKKKY 245
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFL 1953
CQFFTRFGKCNKD+GKCPY+HDPSKIAVCTKFL GLC+N++CKLTHKVIPERMPDCSY+L
Sbjct: 246 CQFFTRFGKCNKDDGKCPYVHDPSKIAVCTKFLNGLCANANCKLTHKVIPERMPDCSYYL 305
Query: 1954 QGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALGAKC 2013
QGLC N+ CPYRHVHVNP A C+GFLKGYC++GDECRKKHSY CP F+ATGSC+ G KC
Sbjct: 306 QGLCNNEACPYRHVHVNPIAPICDGFLKGYCSEGDECRKKHSYNCPVFEATGSCSQGLKC 365
Query: 2014 RLHHPKSRSNGKKSRRSRKP--KNTHGRYFGSMLVEDSESQTAMSERPTVQNNGNLFVEG 2071
+LHHPK++S G+K +R+ +P KN RYF S+ SES+ + R + + +F
Sbjct: 366 KLHHPKNQSKGRKRKRTNEPSQKNARRRYFSSLHNILSESEPMVFNRRST--DSEVFGME 423
Query: 2072 KLVDYIGLDVSDKEAGETNDALHELLDFNDSGASELQLDDLDELIKPIRIM 2122
L D+I L ++ EAG+ ND +DS + L + LI P+ +M
Sbjct: 424 SL-DFITLGTAEYEAGDDNDPATVQSISSDSES----LISIYNLITPVALM 469
>gi|9454580|gb|AAF87903.1|AC015447_13 Hypothetical protein [Arabidopsis thaliana]
Length = 2123
Score = 523 bits (1348), Expect = e-145, Method: Compositional matrix adjust.
Identities = 327/782 (41%), Positives = 446/782 (57%), Gaps = 91/782 (11%)
Query: 1356 TRPRTWHRTESSSASPAPGNKSL---LPPQNQLPKKVAKYQSMSYIRKGNSLVRKPA--- 1409
T+ TWHR +S S K L L Q + PK A+ + SY+RKGNSL+RKP+
Sbjct: 1417 TKRHTWHRKSDASPSSFVAAKPLSSTLSTQQKFPKVTAQSNN-SYVRKGNSLLRKPSHGS 1475
Query: 1410 PVAAVSQISHGLTSSVYWLNSSGIGESKKTRGSEGGADVVDPPSFLR-GVNAPLERPRTP 1468
P AA+ G+ S LN + + K+ GS DV + S ++ G A LER P
Sbjct: 1476 PGAAL-----GIPPSAIQLNHFTVED--KSTGSSNMVDVDNASSLVKTGEIATLERQSKP 1528
Query: 1469 PL-PVVAKVPNHATSSTGDYTSSPVAEPLPNGCSETKSDTQKLMEINDELNFSNAALNIS 1527
P +K+ N +S+G S + L G E+ D+ + E NF ++ +
Sbjct: 1529 PSDSSTSKLSNAIATSSGKCALSYSTDHLTTGLPESIMDSA----TSGEANFPHSGGDTL 1584
Query: 1528 KT--PVNQTGSVNGLESQGELNDGTLCTSNVKRITYLKRKSNQLIAASNGCSLSVQNPDK 1585
KT + QTG + + Q + N L +SN+KR+ Y+KRK+NQL+AAS+ + + +
Sbjct: 1585 KTSDTLIQTGYAS--DCQQKRNPSDLDSSNLKRMVYVKRKANQLVAASD-----IHDVSQ 1637
Query: 1586 TQSTASDGYYKRRKNQLIRTPLESHINQTVSLADGSFTSEGEKCAKDIF--RRSDMSQSY 1643
Q +SDGY+KR KNQL+R ES NQ++SL D + + + A ++ R S + S
Sbjct: 1638 NQIPSSDGYFKRSKNQLVRNS-ESRCNQSISLPDDALDT---RSAANMVSERPSSSAFSD 1693
Query: 1644 KAVKKICKPIRFSLVWTLNSMQSSKSDDHFLYRGKVLPSLFPWKRTLYWRRFVQDPVSIS 1703
AV + K +FSLVWT N Q H + ++P L PWKR YWRR + +
Sbjct: 1694 SAVMRPFKQSKFSLVWTQNDPQPRMPIAH-MRNQNIVPQLVPWKRVTYWRRLMNSVSAFR 1752
Query: 1704 NNSSLSAISRKLLLLRKRDTVYTRSNHGFSLRKYKVLSVGGSSLKWSKSIENRSKKVNEE 1763
N SSL+ I R L +SN K++ V + W S
Sbjct: 1753 NGSSLN-IRRPHWLWLHTQRKKVKSNLD------KIILVRRAETIWHGS----------- 1794
Query: 1764 ATLAVAAVEKKRQENGAESFASETKIRIR-SCRERIFRIGSVRYKMDSSRRTLQRISDDS 1822
+F+ I+ + ++ +FR +++K + D
Sbjct: 1795 ------------------AFSGLVPFVIKWTLQDELFREYLLKHKF---------LLDVD 1827
Query: 1823 SPCAAGPTLEKNAKKSYIPRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHT 1882
SPC+ K K+ +IP+RLVIGN+EYVR GNGNQL+RDPK+R RVLA+EKVRWSLH
Sbjct: 1828 SPCSGPSENGKGVKRPFIPKRLVIGNEEYVRFGNGNQLVRDPKKRTRVLANEKVRWSLHN 1887
Query: 1883 ARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVI 1942
ARLRLA+K+KYCQFFTRFGKCNKD+GKCPY+HDPSKIAVCTKFL GLC+N++CKLTHKVI
Sbjct: 1888 ARLRLAKKKKYCQFFTRFGKCNKDDGKCPYVHDPSKIAVCTKFLNGLCANANCKLTHKVI 1947
Query: 1943 PERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFK 2002
PERMPDCSY+LQGLC N+ CPYRHVHVNP A C+GFLKGYC++GDECRKKHSY CP F+
Sbjct: 1948 PERMPDCSYYLQGLCNNEACPYRHVHVNPIAPICDGFLKGYCSEGDECRKKHSYNCPVFE 2007
Query: 2003 ATGSCALGAKCRLHHPKSRSNGKKSRRSRKP--KNTHGRYFGSMLVEDSESQTAMSERPT 2060
ATGSC+ G KC+LHHPK++S G+K +R+ +P KN RYF S+ SES+ + R +
Sbjct: 2008 ATGSCSQGLKCKLHHPKNQSKGRKRKRTNEPSQKNARRRYFSSLHNILSESEPMVFNRRS 2067
Query: 2061 VQNNGNLFVEGKLVDYIGLDVSDKEAGETNDALHELLDFNDSGASELQLDDLDELIKPIR 2120
+ +F L D+I L ++ EAG+ ND +DS + L + LI P+
Sbjct: 2068 T--DSEVFGMESL-DFITLGTAEYEAGDDNDPATVQSISSDSES----LISIYNLITPVA 2120
Query: 2121 IM 2122
+M
Sbjct: 2121 LM 2122
Score = 107 bits (266), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 95/145 (65%), Gaps = 10/145 (6%)
Query: 266 KREFYASDAGRYGNNRGSREHSYEYNRTPRKQVQKKSALLRIQKPY-YRNRDDGEL---- 320
K ++Y S+ +Y + RG RE S E NRTPRKQVQKKSALLR++ P Y+N + E
Sbjct: 284 KDDYYHSEIEQYFD-RGRREASNELNRTPRKQVQKKSALLRLETPRSYKNSRENEWSRQH 342
Query: 321 -HHSN--YEIKSGSFRGKDQVVFSDRDVGEHEQREGSPVELDVSFKSNSLVAKAIVATSS 377
HH+ S S+RGK+ + SDR + E +QR SPV+LD+SFKSN LVAK + + +S
Sbjct: 343 NHHNGNGKRFNSNSYRGKEHLGHSDRGLVE-KQRGRSPVDLDISFKSNVLVAKPVASPTS 401
Query: 378 SAIVSDANLTPKKGNTRKIVMSNKD 402
+ I S A++TP+ R+ ++S+K+
Sbjct: 402 AGIRSGASVTPRSIKARRALLSDKN 426
>gi|297850590|ref|XP_002893176.1| hypothetical protein ARALYDRAFT_313049 [Arabidopsis lyrata subsp.
lyrata]
gi|297339018|gb|EFH69435.1| hypothetical protein ARALYDRAFT_313049 [Arabidopsis lyrata subsp.
lyrata]
Length = 2132
Score = 518 bits (1333), Expect = e-143, Method: Compositional matrix adjust.
Identities = 334/826 (40%), Positives = 461/826 (55%), Gaps = 87/826 (10%)
Query: 1282 DDMLESAHLVAQRTVSLPAQDVKDTGLTLNPMSGETNGKKHQASHCVSRIHPRRSSSVFT 1341
D S H V ++ VS+P +D++ + ++N E +K + ++ + +P SS+
Sbjct: 1350 DVKFASTH-VKEQVVSVPHRDLQ-SKTSMNSKY-EIEKRKKKPNYSTQKNYP---SSLLF 1403
Query: 1342 ASRDLASSTRTTCTTRPRTWHRTESSSASPAPGNKSL---LPPQNQLPKKVAKYQSMSYI 1398
S + T+ TWHR +S S K L L Q + PK A+ S SY+
Sbjct: 1404 VSDTKKDANPPIHITKRHTWHRKSDTSPSSFVAAKPLSSTLSTQQKFPKVTAQ-SSNSYV 1462
Query: 1399 RKGNSLVRKPA--PVAAVSQISHGLTSSVYWLNSSGIGESKKTRGSEGGADVVDPPSFLR 1456
RKGNSL+RKP+ P A+ G+ S LN + + K+ G DV + S ++
Sbjct: 1463 RKGNSLLRKPSQSPGTAL-----GMPPSAIQLNHFTVED--KSTGPSNMVDVDNASSLVK 1515
Query: 1457 GVNAP-LERPRTPPL-PVVAKVPNHATSSTGDYTSSPVAEPLPNGCSETKSDTQKLMEIN 1514
P LER PP +KV N +S+G S + L G E+ D+ +
Sbjct: 1516 TGEIPTLERQSKPPSDSSTSKVSNAIATSSGKCVLSYSTDHLTTGLPESIMDSA----TS 1571
Query: 1515 DELNFSNAALNISKT--PVNQTGSVNGLESQGELNDGTLCTSNVKRITYLKRKSNQLIAA 1572
E NF ++ + KT + Q G + + Q + N L ++N+KR+ Y+KRK+NQL+AA
Sbjct: 1572 GEANFPHSGGDTLKTFDTLIQMGYAS--DCQQKRNPSDLDSANLKRMVYVKRKANQLVAA 1629
Query: 1573 SNGCSLSVQNPDKTQSTASDGYYKRRKNQLIRTPLESHINQTVSLADGSFTSEGEKCAKD 1632
S+ + + Q +SDGY+KR KNQL+R ES NQ++SL D + + + A +
Sbjct: 1630 SD-----IHGVSQNQIPSSDGYFKRSKNQLVRNS-ESRCNQSISLPDDALDT---RSAAN 1680
Query: 1633 IFRRSDMSQSYKA--VKKICKPIRFSLVWTLNSMQSSKSDDHFLYRGKVLPSLFPWKRTL 1690
I S ++ V + K +FSLVWT N Q H Y+ +LP L PWKR
Sbjct: 1681 IVSERSSSSAFSDSAVMRPFKQSKFSLVWTQNDPQPRMPIAHMRYQN-ILPQLVPWKRVT 1739
Query: 1691 YWRRFVQDPVSISNNSSLSAISRK--LLLLRKRDTVYTRSNHGFSLRKYKVLSVGGSSLK 1748
YWRR + + VS N S I R L L +R V + + K++ V +
Sbjct: 1740 YWRRLM-NSVSAFRNGSFPNIRRPHWLWLHSQRKKVKSILD--------KIIIVWRAETI 1790
Query: 1749 WSKSIENRSKKVNEEATLAVAAVEKKRQENGAESFASETKIRIRSCRERIFRIGSVRYKM 1808
W S + LA ++ Q+ + S + + S
Sbjct: 1791 WHGSAF---------SGLAPFVIKWTLQDELFREYLSYPYVYLVSL-------------- 1827
Query: 1809 DSSRRTLQRISDDSSPCAAGPTLEKNAKKSYIPRRLVIGNDEYVRIGNGNQLIRDPKRRA 1868
+ + D SPC+ K K IP+RLVIGN+EYVR GNGNQL+RDPK+R
Sbjct: 1828 -----NINVLLDVDSPCSGPSENGKGVKIPIIPKRLVIGNEEYVRFGNGNQLVRDPKKRT 1882
Query: 1869 RVLASEKVRWSLHTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKG 1928
RVLA+EKVRWSLH RLRLA+K+KYCQFFTRFGKCNKD+GKCPY+HDPSKIAVCTKFL G
Sbjct: 1883 RVLANEKVRWSLHNVRLRLAKKKKYCQFFTRFGKCNKDDGKCPYVHDPSKIAVCTKFLNG 1942
Query: 1929 LCSNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGD 1988
LC+N++CKLTHKVIPERMPDCSY+LQGLC N+ CPYRHVHVNP+A C+GFLKGYC+DGD
Sbjct: 1943 LCANANCKLTHKVIPERMPDCSYYLQGLCNNEACPYRHVHVNPSAPICDGFLKGYCSDGD 2002
Query: 1989 ECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSRKP--KNTHGRYFGSMLV 2046
ECRKKHSY CP F+ATGSC+ G+KC+LHHPK++S G+K +R +P KN GRYF S+
Sbjct: 2003 ECRKKHSYNCPVFEATGSCSQGSKCKLHHPKNQSKGRKRKRPSEPSQKNARGRYFSSLHN 2062
Query: 2047 EDSESQTAMSERPTVQNNGNLF-VEGKLVDYIGLDVSDKEAGETND 2091
SES+ + R + + +F +EG +D+I L ++ EA + ND
Sbjct: 2063 ILSESEPMVFNRRST--DSEVFGMEG--LDFITLGTTEYEASDDND 2104
Score = 112 bits (279), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/143 (44%), Positives = 97/143 (67%), Gaps = 8/143 (5%)
Query: 266 KREFYASDAGRYGNNRGSREHSYEYNRTPRKQVQKKSALLRIQKPY-YRNRDDGEL---- 320
K ++Y S+ +Y + RG RE S E NRTPRKQ+QKKSALLR++ P Y+N + +
Sbjct: 295 KDDYYHSEIEQYFD-RGRREESSELNRTPRKQIQKKSALLRLETPRSYQNSRENDWSRQH 353
Query: 321 -HHSNYEIKSGSFRGKDQVVFSDRDVGEHEQREGSPVELDVSFKSNSLVAKAIVATSSSA 379
HH+ + S S+RGK+ + SDR + E +QR SPV+LD+SFKSN+LVAK + + +S+
Sbjct: 354 NHHNGKRLYSNSYRGKEHMGHSDRGLVE-KQRGRSPVDLDISFKSNALVAKPVASPTSAG 412
Query: 380 IVSDANLTPKKGNTRKIVMSNKD 402
I S A++TP+ R+ ++S+K+
Sbjct: 413 IRSGASVTPRSIKARRALLSDKN 435
>gi|326500250|dbj|BAK06214.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1031
Score = 500 bits (1288), Expect = e-138, Method: Compositional matrix adjust.
Identities = 340/873 (38%), Positives = 459/873 (52%), Gaps = 130/873 (14%)
Query: 1296 VSLPAQDVKDTGLTLNPMSGETNGKKHQASHCVSRIHPR---RSSSVFTASRDLASSTRT 1352
V P +D + GL G GK Q +C S + P+ + +++ ++SR+ R
Sbjct: 238 VLAPKEDSRRAGLD---SVGNPVGKSPQM-NCTSSMPPKVAPKQANLPSSSRE---PPRI 290
Query: 1353 TCTTRPRTWHRTESSSASPAPGNK-SLLPPQNQLPKKVAKYQSMSYIRKGNSLVRKPAPV 1411
+ R +TWHR + +S++ P ++ S LPP+ Q P++ K Q+ SYIRKGN+L+R PA
Sbjct: 291 SSNARHKTWHRGDMASSTSLPSSQPSGLPPK-QPPRRNDKTQN-SYIRKGNALIRNPA-- 346
Query: 1412 AAVSQISHGLTSSVYWLNSSGIGESKKTRGSEGGADVVDPPSFLRGVNAPLERPRTPPLP 1471
++SH + L++ + R S VDP N +ERP+TPPLP
Sbjct: 347 --TGKLSHSSS-----LDTQSMLNKPVMRRSMNFVRKVDPNDSAARSNFTVERPKTPPLP 399
Query: 1472 VVAKVPNHATSSTGDYTSSPVAEPLPNGCSETKSDTQKLMEINDELNFSNAALNISKTPV 1531
+ AK N T+ LP S+T Q + E E S LN
Sbjct: 400 LHAKSINSTTN-------------LPEQLSKTLP-KQHVPETEKE--GSAKQLNA----- 438
Query: 1532 NQTGSVNGLESQGELNDGTLCTSNVKRITYLKRKSNQLIAASNGC--SLSVQNPDKTQS- 1588
G+++ + T S+ ++ Y++ +SNQL+AA C L+ + DK S
Sbjct: 439 -------GVDTPSIRSAQTPEPSDASKVVYVRPRSNQLVAAQRPCPDDLTKSSMDKVLSL 491
Query: 1589 ---TASDGYYKRRKNQLIRTPLESHINQTVSLADGSFTSEGEKCAKDIFRRSDMSQSYKA 1645
TASD Y+K+RKNQ+I + S T + + GE I ++ K
Sbjct: 492 QPPTASDLYFKKRKNQIILSSSSSDGQNTKEIIPAESLNSGENKGVQIASSNNSISGLK- 550
Query: 1646 VKKICKPIRF------SLVWTLNSMQSSKSDDHFLYRGKVLPSLFPWKRTLYWRRFVQDP 1699
++ K ++ S VWTL+ Q + K P + PWKR +Y++ F
Sbjct: 551 -ERPHKALQTNNMGTSSHVWTLSGQQPQRKGSVGTSYVKTFPRILPWKRKIYYKNFRS-- 607
Query: 1700 VSISNNSSLSAISRKLLLLRKRDTVYTRSNHGFSLRKYKVLSVGGSSLKWSKSIENRSKK 1759
S S N S I RKLL +KRD +YT S +GFS+RK VLSVGGSSLKWS+S+E RS+K
Sbjct: 608 -SHSQNVSSLRIVRKLLQTKKRDMIYTVSTNGFSIRKSGVLSVGGSSLKWSRSLEKRSQK 666
Query: 1760 VNEEATLAVAAVEKKRQENGAESFASETKIRIRSCRERIFRIGSVRYKMDSSRRTLQRIS 1819
VNEEATLAVA VEKKR E + T R +
Sbjct: 667 VNEEATLAVADVEKKRGEKRKRQYLHHT-----------------------------RRN 697
Query: 1820 DDSSPCAAGPTLEKNAKKSYIPRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWS 1879
D S A L N + S RR N YVR+ GNQL+R+PK+ R+LA+EKVRWS
Sbjct: 698 DQYSLSVADNQLRNNNQASSDLRRSSSCNG-YVRVSKGNQLVRNPKKVIRMLANEKVRWS 756
Query: 1880 LHTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTH 1939
LHT R RLA+K++YCQFFTRFG+C K G+C YIHD +K+ +CTKFLKGLCS++ CKLTH
Sbjct: 757 LHTVRSRLAKKQQYCQFFTRFGECKKPEGECRYIHDRAKVTICTKFLKGLCSDTSCKLTH 816
Query: 1940 KVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCP 1999
KV+PERM DCSYFL+GLCTN CPYRHV VN NA CE FLKGYCADGDECRKKHSY CP
Sbjct: 817 KVLPERMQDCSYFLKGLCTNTACPYRHVKVNSNAPACEDFLKGYCADGDECRKKHSYACP 876
Query: 2000 TFKATGSCALGAKCRLHHPKSRSNGKKSRRSRKPKN-THGRYFGSMLVEDSESQTAMSER 2058
F+ATG C + C+LHHP + K R P+N + GRYF + + DSE+ S +
Sbjct: 877 VFEATGECPQQSTCKLHHPTKKPIKSKRSRPDTPQNSSWGRYFDTSIRHDSETSKVSSGQ 936
Query: 2059 PTVQNNG-NLFVEGKLVDYIGLDVSDKE---------------------------AGETN 2090
Q ++F G D+I LD+ +E +G+
Sbjct: 937 DDRQKQQHDVFSGGDFTDFITLDIDGEEGVDEPDNIQSVGVPDSIQSVDVPDSIQSGDAP 996
Query: 2091 DALHEL-LDFNDSGASELQLDDLDELIKPIRIM 2122
D++ + LD D GA + DDLD LIKP+RIM
Sbjct: 997 DSIQLMELDSGDLGA---EADDLDALIKPLRIM 1026
>gi|357117146|ref|XP_003560335.1| PREDICTED: uncharacterized protein LOC100829964 [Brachypodium
distachyon]
Length = 1823
Score = 475 bits (1223), Expect = e-130, Method: Compositional matrix adjust.
Identities = 317/803 (39%), Positives = 428/803 (53%), Gaps = 126/803 (15%)
Query: 1351 RTTCTTRPRTWHRTESSSASPAPGNK-SLLPPQNQLPKKVAKYQSMSYIRKGNSLVRKPA 1409
R++ R +TWHR + +S++ + G++ S LPP+ Q P++ K Q+ SYIRKGN+L+R PA
Sbjct: 1111 RSSQNARHKTWHRGDMASSASSHGSQPSGLPPK-QPPRRNGKIQN-SYIRKGNALIRNPA 1168
Query: 1410 PVAAVSQISHGLTSSVYWLNSSGIGESKKTRGSEGGADVVDPPSFLRGVNAPLERPRTPP 1469
+ + S+ T + LN + R S VD + N +ERP+TPP
Sbjct: 1169 TGSVPASSSNPDTQNK--LNKPVM------RRSMNFVRKVDSNDSMARSNFSVERPKTPP 1220
Query: 1470 LPVVAKVPNHATSSTGDYTSSPVAEPLPNGCSETKSDTQKLMEINDELNFSNAALNISKT 1529
LP+ AK N + LP +T L+ +
Sbjct: 1221 LPLHAKFINPTMN-------------LPEQSPQT--------------------LHKQHS 1247
Query: 1530 PVNQTGSVNGLESQGELNDGTLCTS----------NVKRITYLKRKSNQLIAASNGCSLS 1579
P + ES G+L G S + ++ Y++ KSNQL+AA +
Sbjct: 1248 PETEKE-----ESVGKLYSGVDFPSIKSAQKSEPSDTSKVVYVRPKSNQLVAAQRQDADD 1302
Query: 1580 VQNP--DKTQS----TASDGYYKRRKNQLI--RTPLESHINQTVSLADGSFTSEGE---- 1627
N DK S T+SD Y K RKNQ+I + L+ + ++ A S + E +
Sbjct: 1303 SINSAMDKVLSLQPHTSSDFYLKNRKNQIILSSSSLDGQSTKEITTAKNSNSGENKGVHI 1362
Query: 1628 -------KCAKDIFRRSDMSQSYKAVKKICKPIRFSLVWTLNSMQSSKSDDHFLYRGKVL 1680
KDI R KA++ FS VWTLN Q + K
Sbjct: 1363 ASSNNSITVFKDIPR--------KALQTTNNMGSFSHVWTLNGQQPQRKVSVATGYMKAS 1414
Query: 1681 PSLFPWKRTLYWRRFVQDPVSISNNSSLSAISRKLLLLRKRDTVYTRSNHGFSLRKYKVL 1740
+ PWKR +Y++ F S N S + R+LL +KRD VYT S GF++RK VL
Sbjct: 1415 RRILPWKRKIYYKNFRS---SHPQNVSSLRLVRRLLQAKKRDMVYTVSTDGFTIRKSPVL 1471
Query: 1741 SVGGSSLKWSKSIENRSKKVNEEATLAVAAVEKKRQENGAESFASETKIRIRSCRERIFR 1800
SVGGSSLKWS+S+E RS+KVNEEAT AV+ V++ R+E
Sbjct: 1472 SVGGSSLKWSRSLEKRSQKVNEEATRAVSDVQRMRRE----------------------- 1508
Query: 1801 IGSVRYKMDSSRRTLQRISDDSSPCAAGPTLEKNAKKSYIPRRLVIGNDEYVRIGNGNQL 1860
++K + R SD S G L N + S RR N EYVR+ GNQL
Sbjct: 1509 ----KWKQLTER------SDQYSVSVDGNKLMNNNQASSDLRRSSTCN-EYVRVSKGNQL 1557
Query: 1861 IRDPKRRARVLASEKVRWSLHTAR-LRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKI 1919
+R+PK+ R+LA+EKVRWSLHT R RL +K +YCQFFTRFG+C K G+C YIHD +K+
Sbjct: 1558 VRNPKKVIRMLANEKVRWSLHTVRSRRLPKKPQYCQFFTRFGECKKPEGQCRYIHDRAKV 1617
Query: 1920 AVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGF 1979
+CTKFLKGLCS++ CKLTH+V+PERM DCSYFL+GLCTN CPYRHV VN NA CE F
Sbjct: 1618 TICTKFLKGLCSDTSCKLTHQVLPERMQDCSYFLRGLCTNTACPYRHVKVNSNAPACEDF 1677
Query: 1980 LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSRKPKNTHGR 2039
LKGYCADGDECR+KH+YVCP F+ATG CA + C+LHHPK K+SR ++ GR
Sbjct: 1678 LKGYCADGDECRRKHTYVCPVFEATGECAQQSSCKLHHPKKLIKSKRSRPDTPQNSSWGR 1737
Query: 2040 YFGSMLVEDSESQTAMSERPTVQNNGNLFVEGKLVDYIGLDVSDKEAGETNDALHELLDF 2099
YF + + D E++ A S++ VQ ++F G VD+I LD SD A + +L++
Sbjct: 1738 YFDTNIGHDRETRKASSDQDHVQKLQHVFSGGDFVDFIRLD-SDGVAEDGASDGVQLMEL 1796
Query: 2100 NDSGASELQLDDLDELIKPIRIM 2122
DS Q D +D LIKP+RIM
Sbjct: 1797 -DSEDLNAQADSIDALIKPLRIM 1818
>gi|222635942|gb|EEE66074.1| hypothetical protein OsJ_22091 [Oryza sativa Japonica Group]
Length = 1972
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 320/833 (38%), Positives = 433/833 (51%), Gaps = 133/833 (15%)
Query: 1324 ASHCVSRIHPRRSSSVFTASRDLASSTRTTCTTRPRTWHRTESSSASPAPGNKSLLPPQN 1383
AS + ++ P++ + + ++SR+ TR R RTWHR +S+S + L
Sbjct: 1234 ASSTLQKVAPKQVT-LPSSSRE---PTRANQNARHRTWHRGNIASSSSSLHASQPLGLPP 1289
Query: 1384 QLPKKVAKYQSMSYIRKGNSLVRKPAPVAAVSQISHGLTSSVY----WLNSSGIGESKKT 1439
+LP K SYIRKGN+L+R P S +H +S+ + LN + +++
Sbjct: 1290 KLPPKKNDKAQNSYIRKGNALIRNP------SNGNHPHSSTGHDTQNKLNKPVV---RRS 1340
Query: 1440 RGSEGGADVVDPPSFLRGVNAPLERPRTPPLPVVAKVPNHATSSTGDYTSSPVAEPLPNG 1499
AD D L N +ERP+TPPLP+ H SS + + EPL
Sbjct: 1341 MNFVRKADTKD----LANSNISVERPKTPPLPL------HTKSSC----PTTLLEPL--- 1383
Query: 1500 CSETKSDTQKLMEINDELNFSNAALNISKTPVNQTGSVNGLESQGELNDGTLCTSNVKRI 1559
+Q L + + K+ V+ + + +S+ S+ ++
Sbjct: 1384 -------SQTLQKQHGHEAEKEDLTGQPKSGVDNSSIKSAQKSE---------PSDPSKV 1427
Query: 1560 TYLKRKSNQLIAASNGCSLSVQN--PDKTQS----TASDGYYKRRKNQLIRTPLESHINQ 1613
Y++ KSNQL+AA + + N DK S A D Y K+RKNQ++ +
Sbjct: 1428 VYVRPKSNQLVAAQRQHPIDLVNSPTDKILSLQAPIAYDLYLKKRKNQIVLS-------- 1479
Query: 1614 TVSLADGSFTSE-------GEKCAKDIFRRSDMS-------QSYKAVKKICKPIRFSLVW 1659
+ S +DG T E + KD+ +S + KA++ RFS VW
Sbjct: 1480 SCSPSDGLSTKETLPAENSNSEEKKDLMIACSISGIPGVKDRPQKALQTTNNVGRFSHVW 1539
Query: 1660 TLNSMQSSKSDDHFLYRGKVLPSLFPWKRTLYWRRFVQDPVSISNNSSLSAISRKLLLLR 1719
TLN Q + P + PWKR ++ + F +SN SS+ I RKLL R
Sbjct: 1540 TLNGQQPQRKGFMGSSHMNAFPRILPWKRKIFCKNFRSS--HMSNVSSIR-IVRKLLQTR 1596
Query: 1720 KRDTVYTRSNHGFSLRKYKVLSVGGSSLKWSKSIENRSKKVNEEATLAVAAVE------- 1772
KRD +YT S GFSLRK VLSVGGSSLKWS+S+E RS+KVN+EATLA+A VE
Sbjct: 1597 KRDMIYTVSTDGFSLRKSGVLSVGGSSLKWSRSLEKRSQKVNKEATLALAEVERRKREKR 1656
Query: 1773 --KKRQENGAESFASETKIRIRSCRERIFRIGSVRYKMDSSRRTLQRISDDSSPCAAGPT 1830
+ + G F S T ++R+ R Q SD P
Sbjct: 1657 KRQSLHDKGDHQFESVTGNQLRNSR--------------------QSSSDLRKPSTC--- 1693
Query: 1831 LEKNAKKSYIPRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARK 1890
+EYVR+ GNQL+R+PK R+LAS+KVRWSLHT R RLA+K
Sbjct: 1694 ------------------NEYVRVSKGNQLVRNPKNVIRMLASDKVRWSLHTVRSRLAKK 1735
Query: 1891 RKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCS 1950
++YCQFFTRFG+C K GKCPYIHD +K+ +CTKFLKGLCSN+ CKLTHKV+PERMPDCS
Sbjct: 1736 QQYCQFFTRFGECKKPRGKCPYIHDRAKVTICTKFLKGLCSNTSCKLTHKVLPERMPDCS 1795
Query: 1951 YFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALG 2010
YFL+GLCTN CPYRHV VN NA CE FLKGYCA GDEC KKHSYVCP F+ATG C G
Sbjct: 1796 YFLRGLCTNIACPYRHVKVNLNAPVCEDFLKGYCAYGDECHKKHSYVCPVFEATGECPQG 1855
Query: 2011 AKCRLHHPKSRSNGKKSRRSRKPKNTHGRYFGSMLVEDSESQTAMSERPTVQNNGNLFVE 2070
++C+LHHPKS+ K R ++ GRYF + + E++ + + +F +
Sbjct: 1856 SRCKLHHPKSKVKSKSRRPDFLQNSSWGRYFDASIDHQDETRKVSLDEDEREKPQRVFTD 1915
Query: 2071 GKLVDYIGLDVSDKEAGETNDALHEL-LDFNDSGASELQLDDLDELIKPIRIM 2122
G L +I LD E DA ++ L DSG +Q D+LD LIKP+RIM
Sbjct: 1916 GDL-GFISLDDDADEDVTALDASDDIPLMELDSGDLSVQTDNLDALIKPLRIM 1967
>gi|51535575|dbj|BAD37519.1| zinc finger (CCCH-type) protein-like [Oryza sativa Japonica Group]
Length = 2068
Score = 456 bits (1174), Expect = e-125, Method: Compositional matrix adjust.
Identities = 320/833 (38%), Positives = 433/833 (51%), Gaps = 133/833 (15%)
Query: 1324 ASHCVSRIHPRRSSSVFTASRDLASSTRTTCTTRPRTWHRTESSSASPAPGNKSLLPPQN 1383
AS + ++ P++ + + ++SR+ TR R RTWHR +S+S + L
Sbjct: 1330 ASSTLQKVAPKQVT-LPSSSRE---PTRANQNARHRTWHRGNIASSSSSLHASQPLGLPP 1385
Query: 1384 QLPKKVAKYQSMSYIRKGNSLVRKPAPVAAVSQISHGLTSSVY----WLNSSGIGESKKT 1439
+LP K SYIRKGN+L+R P S +H +S+ + LN + +++
Sbjct: 1386 KLPPKKNDKAQNSYIRKGNALIRNP------SNGNHPHSSTGHDTQNKLNKPVV---RRS 1436
Query: 1440 RGSEGGADVVDPPSFLRGVNAPLERPRTPPLPVVAKVPNHATSSTGDYTSSPVAEPLPNG 1499
AD D L N +ERP+TPPLP+ H SS + + EPL
Sbjct: 1437 MNFVRKADTKD----LANSNISVERPKTPPLPL------HTKSSC----PTTLLEPL--- 1479
Query: 1500 CSETKSDTQKLMEINDELNFSNAALNISKTPVNQTGSVNGLESQGELNDGTLCTSNVKRI 1559
+Q L + + K+ V+ + + +S+ S+ ++
Sbjct: 1480 -------SQTLQKQHGHEAEKEDLTGQPKSGVDNSSIKSAQKSE---------PSDPSKV 1523
Query: 1560 TYLKRKSNQLIAASNGCSLSVQN--PDKTQS----TASDGYYKRRKNQLIRTPLESHINQ 1613
Y++ KSNQL+AA + + N DK S A D Y K+RKNQ++ +
Sbjct: 1524 VYVRPKSNQLVAAQRQHPIDLVNSPTDKILSLQAPIAYDLYLKKRKNQIVLS-------- 1575
Query: 1614 TVSLADGSFTSE-------GEKCAKDIFRRSDMS-------QSYKAVKKICKPIRFSLVW 1659
+ S +DG T E + KD+ +S + KA++ RFS VW
Sbjct: 1576 SCSPSDGLSTKETLPAENSNSEEKKDLMIACSISGIPGVKDRPQKALQTTNNVGRFSHVW 1635
Query: 1660 TLNSMQSSKSDDHFLYRGKVLPSLFPWKRTLYWRRFVQDPVSISNNSSLSAISRKLLLLR 1719
TLN Q + P + PWKR ++ + F +SN SS+ I RKLL R
Sbjct: 1636 TLNGQQPQRKGFMGSSHMNAFPRILPWKRKIFCKNFRSS--HMSNVSSIR-IVRKLLQTR 1692
Query: 1720 KRDTVYTRSNHGFSLRKYKVLSVGGSSLKWSKSIENRSKKVNEEATLAVAAVE------- 1772
KRD +YT S GFSLRK VLSVGGSSLKWS+S+E RS+KVN+EATLA+A VE
Sbjct: 1693 KRDMIYTVSTDGFSLRKSGVLSVGGSSLKWSRSLEKRSQKVNKEATLALAEVERRKREKR 1752
Query: 1773 --KKRQENGAESFASETKIRIRSCRERIFRIGSVRYKMDSSRRTLQRISDDSSPCAAGPT 1830
+ + G F S T ++R+ R Q SD P
Sbjct: 1753 KRQSLHDKGDHQFESVTGNQLRNSR--------------------QSSSDLRKPSTC--- 1789
Query: 1831 LEKNAKKSYIPRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARK 1890
+EYVR+ GNQL+R+PK R+LAS+KVRWSLHT R RLA+K
Sbjct: 1790 ------------------NEYVRVSKGNQLVRNPKNVIRMLASDKVRWSLHTVRSRLAKK 1831
Query: 1891 RKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCS 1950
++YCQFFTRFG+C K GKCPYIHD +K+ +CTKFLKGLCSN+ CKLTHKV+PERMPDCS
Sbjct: 1832 QQYCQFFTRFGECKKPRGKCPYIHDRAKVTICTKFLKGLCSNTSCKLTHKVLPERMPDCS 1891
Query: 1951 YFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALG 2010
YFL+GLCTN CPYRHV VN NA CE FLKGYCA GDEC KKHSYVCP F+ATG C G
Sbjct: 1892 YFLRGLCTNIACPYRHVKVNLNAPVCEDFLKGYCAYGDECHKKHSYVCPVFEATGECPQG 1951
Query: 2011 AKCRLHHPKSRSNGKKSRRSRKPKNTHGRYFGSMLVEDSESQTAMSERPTVQNNGNLFVE 2070
++C+LHHPKS+ K R ++ GRYF + + E++ + + +F +
Sbjct: 1952 SRCKLHHPKSKVKSKSRRPDFLQNSSWGRYFDASIDHQDETRKVSLDEDEREKPQRVFTD 2011
Query: 2071 GKLVDYIGLDVSDKEAGETNDALHEL-LDFNDSGASELQLDDLDELIKPIRIM 2122
G L +I LD E DA ++ L DSG +Q D+LD LIKP+RIM
Sbjct: 2012 GDL-GFISLDDDADEDVTALDASDDIPLMELDSGDLSVQTDNLDALIKPLRIM 2063
>gi|413954696|gb|AFW87345.1| hypothetical protein ZEAMMB73_473743 [Zea mays]
Length = 1192
Score = 455 bits (1171), Expect = e-124, Method: Compositional matrix adjust.
Identities = 314/803 (39%), Positives = 427/803 (53%), Gaps = 112/803 (13%)
Query: 1346 LASSTRTTCTTRPRTWHRTESSSASPA--PGNKSLLPPQNQLPKKVAKYQSMSYIRKGNS 1403
L R R RTW R +SS++ + S LPP+ LP K SYIRKGN+
Sbjct: 471 LLEPPRLNQNARNRTWRRDNASSSNSSLHVSQTSGLPPK--LPLKKNSKSQNSYIRKGNA 528
Query: 1404 LVRKPAPVAAVSQISHGLTSSVYWLNSSGIGESKKTRGSEGGADVVDPPSFLRGVNAP-- 1461
L+R PA +G N S ++ + +F+R V++
Sbjct: 529 LIRNPA---------NG--------NHLHSSSSLDSQNKLSKPVMRRSMNFVRNVDSKDA 571
Query: 1462 ------LERPRTPPLPVVAKVPNHATSSTGDYTSSPVAEPLPNGCSETKSDTQKLMEIND 1515
+ERP+TPPLP+ K + A + V EPL + +T+K + +
Sbjct: 572 AHSHISVERPKTPPLPLHTKSISCAVN---------VLEPLSQNLQQQVLETEK-EDSSG 621
Query: 1516 ELNFSNAALNISKTPVNQTGSVNGLESQGELNDGTLCTSNVKRITYLKRKSNQLIA---- 1571
++N + A N+S ++++ +++ + Y++ K NQL+A
Sbjct: 622 QVN--SGADNLSIISLHKSEALDA-----------------GKAIYVRPKLNQLVAQGRH 662
Query: 1572 ASNGCSLSVQNPDKTQSTA-SDGYYKRRKNQLIRTPLESHINQTVSLADGSFTSEGEKCA 1630
++S+ Q +A SD Y+K+RKNQ+I P S + +F +E K
Sbjct: 663 LGESSNISLDKVTLLQPSATSDLYFKKRKNQIILGPSTSDAPSS----KDTFQAENIKSG 718
Query: 1631 KDIFRRSDMSQS---------YKAVKKICKPIRFSLVWTLNSMQSSKSDDHFLYRGKVLP 1681
+ S S + +KA++ FS VWTLN K KVLP
Sbjct: 719 ESKVLMSSSSNNNITVAKDRLHKALQTTNTVRSFSHVWTLNGQNPRKKSYVGASHMKVLP 778
Query: 1682 SLFPWKRTLYWRRFVQDPVSISNNSSLSAISRKLLLLRKRDTVYTRSNHGFSLRKYKVLS 1741
+ PWKR ++ + F S+ N SS+ I RKLL RKR T+YT S GFSLRK VLS
Sbjct: 779 RILPWKRKIFCQNFRGSYSSLLNTSSI-GIMRKLLQTRKRSTIYTVSTDGFSLRKSGVLS 837
Query: 1742 VGGSSLKWSKSIENRSKKVNEEATLAVAAVEKKRQENGAESFASETKIRIRSCRERIFRI 1801
+GGSSLKWS+S+E S+KVNEEAT AVA VE+K +R + +R
Sbjct: 838 IGGSSLKWSRSLEKHSRKVNEEATQAVAEVERK-----KREKRKRQSLRSKGRNDRYS-- 890
Query: 1802 GSVRYKMDSSRRTLQRISDDSSPCAAGPTLEKNAKKSYIPRRLVIGNDEYVRIGNGNQLI 1861
SV ++R S SS C +EYVR+ GNQL+
Sbjct: 891 ASVAANQLTNRSRASSDSRVSSTC-----------------------NEYVRVNKGNQLV 927
Query: 1862 RDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAV 1921
R+PK+ R+LASEKVRWSLHT R RLA+KR+YCQFFTRFG+C K GKCPYIHD +K+ +
Sbjct: 928 RNPKKVIRMLASEKVRWSLHTVRTRLAKKRQYCQFFTRFGECKKSGGKCPYIHDRAKVVI 987
Query: 1922 CTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLK 1981
CTKFLKGLCS++ CKLTHKV+PERMPDCSYFLQGLCTN CPYRHV VN NA CE FLK
Sbjct: 988 CTKFLKGLCSSTSCKLTHKVLPERMPDCSYFLQGLCTNTACPYRHVKVNSNAPVCEDFLK 1047
Query: 1982 GYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSRKPKNTHGRYF 2041
GYCADGDECRKKHSYVC F+ATG C G++C+LHHPK +S K+S+ N+ GRYF
Sbjct: 1048 GYCADGDECRKKHSYVCLVFEATGECPQGSRCKLHHPKKKSKSKRSKVDTVQNNSWGRYF 1107
Query: 2042 GSMLVEDSESQTAMSERPTVQNNGNLFVEGKLVDYI--GLDVSDKEAGETNDALHELLDF 2099
+ + S ++ E Q + E + D+I G + E +T+D + +L++
Sbjct: 1108 ETNVGHGSGARIVYLEEDERQKPEQVSGE-EFADFIELGAGIEVPEDADTSDDI-QLMEL 1165
Query: 2100 NDSGASELQLDDLDELIKPIRIM 2122
D G E+Q D+ D +IKP+RIM
Sbjct: 1166 -DLGNLEVQADNNDAIIKPLRIM 1187
>gi|218198613|gb|EEC81040.1| hypothetical protein OsI_23831 [Oryza sativa Indica Group]
Length = 632
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 283/700 (40%), Positives = 375/700 (53%), Gaps = 112/700 (16%)
Query: 1455 LRGVNAPLERPRTPPLPVVAKVPNHATSSTGDYTSSPVAEPLPNGCSETKSDTQKLMEIN 1514
L N +ERP+TPPLP+ H SS P+++ L + D +K
Sbjct: 12 LANSNISVERPKTPPLPL------HTKSSCPTTLLEPLSQTLQK---QHGHDAEK----- 57
Query: 1515 DELNFSNAALNISKTPVNQTGSVNGLESQGELNDGTLCTSNVKRITYLKRKSNQLIAASN 1574
++L K+ V+ + + +S+ S+ ++ Y++ KSNQL+AA
Sbjct: 58 EDLT------GQPKSGVDNSSIKSAQKSE---------PSDPSKVVYVRPKSNQLVAAQR 102
Query: 1575 GCSLSVQN--PDKTQS----TASDGYYKRRKNQLIRTPLESHINQTVSLADGSFTSE--- 1625
+ + N DK S ASD Y K+RKNQ++ + + S +DG T E
Sbjct: 103 QHPIDLVNSPTDKILSLQAPIASDLYLKKRKNQIVLS--------SCSPSDGLSTKETLP 154
Query: 1626 ----GEKCAKDIFRRSDMS-------QSYKAVKKICKPIRFSLVWTLNSMQSSKSDDHFL 1674
+ KD+ +S + KA++ RFS VWTLN Q +
Sbjct: 155 AENSNSEEKKDLMIACSISGIPGVKDRPQKALQTTNNVGRFSHVWTLNGQQPQRKGFMGS 214
Query: 1675 YRGKVLPSLFPWKRTLYWRRFVQDPVSISNNSSLSAISRKLLLLRKRDTVYTRSNHGFSL 1734
P + PWKR ++ + F +SN SS+ I RKLL RKRD +YT S GFSL
Sbjct: 215 SHMNAFPRILPWKRKIFCKNFRSS--HMSNVSSIR-IVRKLLQTRKRDMIYTVSTDGFSL 271
Query: 1735 RKYKVLSVGGSSLKWSKSIENRSKKVNEEATLAVAAVE---------KKRQENGAESFAS 1785
RK VLSVGGSSLKWS+S+E RS+KVN+EATLA+A VE + + G F S
Sbjct: 272 RKSGVLSVGGSSLKWSRSLEKRSQKVNKEATLALAEVERRKREKRKRQSLHDKGDHQFES 331
Query: 1786 ETKIRIRSCRERIFRIGSVRYKMDSSRRTLQRISDDSSPCAAGPTLEKNAKKSYIPRRLV 1845
T ++R+ + Q SD P
Sbjct: 332 VTGNQLRN--------------------SCQSSSDLRKPSTC------------------ 353
Query: 1846 IGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRFGKCNK 1905
+EYVR+ GNQL+R+PK R+LAS+KVRWSLHT R RLA+K++YCQFFTRFG+C K
Sbjct: 354 ---NEYVRVSKGNQLVRNPKNVIRMLASDKVRWSLHTVRSRLAKKQQYCQFFTRFGECKK 410
Query: 1906 DNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYR 1965
GKCPYIHD +K+ +CTKFLKGLCSN+ CKLTHKV+PERMPDCSYFL+GLCTN CPYR
Sbjct: 411 PRGKCPYIHDRAKVTICTKFLKGLCSNTSCKLTHKVLPERMPDCSYFLRGLCTNIACPYR 470
Query: 1966 HVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGK 2025
HV VN NA CE FLKGYCA GDEC KKHSYVCP F+ATG C G++C+LHHPKS+ K
Sbjct: 471 HVKVNLNAPVCEDFLKGYCAYGDECHKKHSYVCPVFEATGECPQGSRCKLHHPKSKVKSK 530
Query: 2026 KSRRSRKPKNTHGRYFGSMLVEDSESQTAMSERPTVQNNGNLFVEGKLVDYIGLDVSDKE 2085
R ++ GRYF + + E++ + + +F +G L +I LD E
Sbjct: 531 SRRPDFLQNSSWGRYFDASIDHQDETRKVSLDEDEREKPQRVFSDGDL-GFISLDDDADE 589
Query: 2086 AGETNDALHEL-LDFNDSGASELQLDDLDELIKPIRIMNS 2124
DA ++ L DSG Q D+LD LIKP+RIM +
Sbjct: 590 DVTALDASDDIPLMELDSGDLSAQTDNLDALIKPLRIMRT 629
>gi|242093676|ref|XP_002437328.1| hypothetical protein SORBIDRAFT_10g024960 [Sorghum bicolor]
gi|241915551|gb|EER88695.1| hypothetical protein SORBIDRAFT_10g024960 [Sorghum bicolor]
Length = 1659
Score = 381 bits (979), Expect = e-102, Method: Compositional matrix adjust.
Identities = 261/675 (38%), Positives = 345/675 (51%), Gaps = 132/675 (19%)
Query: 1346 LASSTRTTCTTRPRTWHRTESSSASPA--PGNKSLLPPQNQLPKKVAKYQSMSYIRKGNS 1403
L + R R RTW R +SS++ S LPP+ LP K SYIRKGN+
Sbjct: 1077 LRAPPRLNQNARNRTWRRDNASSSNSLLHVSQTSGLPPK--LPVKKNSKSQNSYIRKGNA 1134
Query: 1404 LVRKPAPVAAVSQISHGLTSSVYWLNSSGIGESKKTRGSEGGADVVDPPSFLRGVNAP-- 1461
L+R PA L+SS + K++ + +F+R V++
Sbjct: 1135 LIRNPA---------------TGNLHSSSLDSQNKSKPV-----MRRSMNFVRKVDSKDV 1174
Query: 1462 ------LERPRTPPLPVVAKVPNHATSSTGDYTSSPVAEPLPNGCSETKSDTQKLMEIND 1515
+ERP+TPPLP+ H S + D + EPL +++ Q+++E
Sbjct: 1175 GHSHISVERPKTPPLPL------HTKSISCDVN---ILEPL------SQNLQQQVIETEK 1219
Query: 1516 ELNFSNAALNISKTPVNQTGSVNGLESQGELNDGTLCTSNVK----------RITYLKRK 1565
E +S G++N G S + + Y++ K
Sbjct: 1220 E------------------------DSSGQVNSGADIPSIISSHKSEALDAGKAIYVRPK 1255
Query: 1566 SNQLIAASNG--CSLSVQNPDKTQ----STASDGYYKRRKNQLIRTPLESHINQTVSLAD 1619
NQ++ A C S DK ST SD Y+K+RKNQ+I P S + +
Sbjct: 1256 LNQVVVAQGQHLCESSNLPLDKVTLLQPSTTSDLYFKKRKNQIILGPSTSDAPSSKDTSQ 1315
Query: 1620 GSFTSEGE-KCAKDIFRRSDMS----QSYKAVKKICKPIRFSLVWTLNSMQSSKSDDHFL 1674
GE K ++++ + +KA++ S VWTL+ K
Sbjct: 1316 AENIKSGESKVLMSASSNNNITVAKDRPHKALQTTNTVRSSSHVWTLSGQNPRKKSFVGA 1375
Query: 1675 YRGKVLPSLFPWKRTLYWRRFVQDPVSISNNSSLSAISRKLLLLRKRDTVYTRSNHGFSL 1734
KV P + PWKR ++ + F S+ N SS+ I RKLL RKR T+YT S GFSL
Sbjct: 1376 IHMKVFPRILPWKRKIFCQNFRGSYSSLLNTSSI-GIMRKLLQTRKRSTIYTVSTDGFSL 1434
Query: 1735 RKYKVLSVGGSSLKWSKSIENRSKKVNEEATLAVAAVEKKRQENGAESFASETKIRIRSC 1794
RK VLS+GGSSLKWS+S+E S+KVNEEAT AVA VE+K++E
Sbjct: 1435 RKSGVLSIGGSSLKWSRSLEKHSQKVNEEATQAVAEVERKKREKRKRQ------------ 1482
Query: 1795 RERIFRIGSVRYKMDSSRRTLQRISDDSSPCAAGPTLEKNAKKSYIPRRLVIGNDEYVRI 1854
S+R K + R S A L +++ S EYVR+
Sbjct: 1483 --------SLRNKGRNDRY---------SASVAANQLTNSSRAS----------SEYVRV 1515
Query: 1855 GNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIH 1914
GNQL+R+PK+ R+LASEKVRWSLHT R RLA+K++YCQFFTRFG+C K GKCPYIH
Sbjct: 1516 NKGNQLVRNPKKVIRMLASEKVRWSLHTVRRRLAKKQQYCQFFTRFGECKKSGGKCPYIH 1575
Query: 1915 DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNAS 1974
D +K+A+CTKFL GLCS++ CKLTHKV+PERMPDCSYFLQGLCTN CPYRHV VN NA
Sbjct: 1576 DRAKVAICTKFLNGLCSSTSCKLTHKVLPERMPDCSYFLQGLCTNTACPYRHVKVNSNAP 1635
Query: 1975 TCEGFLKGYCADGDE 1989
CE FLKGYCADGDE
Sbjct: 1636 VCEDFLKGYCADGDE 1650
>gi|302767244|ref|XP_002967042.1| hypothetical protein SELMODRAFT_64170 [Selaginella moellendorffii]
gi|300165033|gb|EFJ31641.1| hypothetical protein SELMODRAFT_64170 [Selaginella moellendorffii]
Length = 329
Score = 377 bits (969), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/314 (58%), Positives = 225/314 (71%), Gaps = 12/314 (3%)
Query: 1712 SRKLLLLRKRDTVYTRSNHGFSLRKYKVLSVGGSSLKWSKSIENRSKKVNEEATLAVAAV 1771
S KL +LR +YTRS +GFSL + V SV G+SLKW+KS+E RS++ N++AT AVAA+
Sbjct: 3 SEKLRVLRTSQPLYTRSANGFSLHRSGVRSVDGASLKWTKSLEKRSRQANQDATKAVAAL 62
Query: 1772 EK---KRQENGAESFASETKIRIRSCRERIFRIGSVRYKMDSSRRTLQRISDDSSPCAAG 1828
EK K+ + G ++ + RERI +G VRYKMD S+RTLQRI S +
Sbjct: 63 EKHCRKKTDKGG--------VKAGTSRERIVLVGLVRYKMDPSKRTLQRIQGAFSSENSN 114
Query: 1829 PTLEKNAKKSYI-PRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRL 1887
+ + PRR IG YVR+GNGNQL+RDPK +R LASEKVRWSLH R R+
Sbjct: 115 VSSSSTGAWGLLTPRRASIGGAVYVRMGNGNQLVRDPKASSRALASEKVRWSLHNIRSRV 174
Query: 1888 ARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMP 1947
+K++YCQFFTRFGKC K +GKCPYIHD K+AVCTKFLKG CSN C LTHKV+PERMP
Sbjct: 175 IKKQQYCQFFTRFGKCKKGDGKCPYIHDAGKVAVCTKFLKGSCSNVSCLLTHKVLPERMP 234
Query: 1948 DCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSC 2007
DCS+FLQGLC N+ CPYRHV+VNP+A CEGFLKGYCA GD+C KKH+YVCP + ATG C
Sbjct: 235 DCSFFLQGLCINEECPYRHVNVNPDAPVCEGFLKGYCASGDQCNKKHTYVCPAYAATGEC 294
Query: 2008 ALGAKCRLHHPKSR 2021
A C+LHHPK +
Sbjct: 295 PERAACKLHHPKKK 308
>gi|302755082|ref|XP_002960965.1| hypothetical protein SELMODRAFT_70673 [Selaginella moellendorffii]
gi|300171904|gb|EFJ38504.1| hypothetical protein SELMODRAFT_70673 [Selaginella moellendorffii]
Length = 329
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/333 (56%), Positives = 231/333 (69%), Gaps = 23/333 (6%)
Query: 1712 SRKLLLLRKRDTVYTRSNHGFSLRKYKVLSVGGSSLKWSKSIENRSKKVNEEATLAVAAV 1771
S KL +LR +YTRS +GFSL + V SV G+SLKW+KS+E RS++ N++AT AVAA+
Sbjct: 3 SEKLRVLRTSQPLYTRSANGFSLHRSGVRSVDGASLKWTKSLEKRSRQANQDATKAVAAL 62
Query: 1772 EK---KRQENGAESFASETKIRIRSCRERIFRIGSVRYKMDSSRRTLQRISDDSSPCAAG 1828
EK K+ + G ++ + RERI +G VRYKMD S+RTLQRI S +
Sbjct: 63 EKHCRKKTDKGG--------VKAGTSRERIVLVGLVRYKMDPSKRTLQRIQGAFSSENSN 114
Query: 1829 PTLEKNAKKSYI-PRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRL 1887
+ + PRR IG YVR+GNGNQL+RDPK +R LASEKVRWSLH R R+
Sbjct: 115 VSSSSTGAWGLLTPRRASIGGAVYVRMGNGNQLVRDPKASSRALASEKVRWSLHNIRSRV 174
Query: 1888 ARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMP 1947
+K++YCQFFTRFGKC K +GKCPYIHD K+AVCTKFLKG CSN C LTHKV+PERMP
Sbjct: 175 IKKQQYCQFFTRFGKCKKGDGKCPYIHDAGKVAVCTKFLKGSCSNVSCLLTHKVLPERMP 234
Query: 1948 DCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSC 2007
DCS+FLQGLC N+ CPYRHV+VNP+A CEGFLKGYCA GD+C KKH+YVCP + ATG C
Sbjct: 235 DCSFFLQGLCINEECPYRHVNVNPDAPVCEGFLKGYCASGDQCNKKHTYVCPAYAATGEC 294
Query: 2008 ALGAKCRLHHP-----------KSRSNGKKSRR 2029
A C+LHHP K+ + G+K RR
Sbjct: 295 PERAACKLHHPNKKERTREVSTKASTKGEKKRR 327
>gi|297842503|ref|XP_002889133.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297334974|gb|EFH65392.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1370
Score = 376 bits (965), Expect = e-100, Method: Compositional matrix adjust.
Identities = 254/662 (38%), Positives = 354/662 (53%), Gaps = 88/662 (13%)
Query: 1471 PVVAKVPNHATSSTGDYT---SSPVAEPLPNGCSETKSDTQKLMEINDELNFSNAALNIS 1527
P+VA P + Y +S + +P P +T+ M +D + AL+
Sbjct: 785 PLVAVKPKVTVQCSSTYVRKGNSLLRKPSPGSLGDTQPLLSHSMPPSDSTSSGKCALSPG 844
Query: 1528 KTPVNQTGSVNGLESQGELNDGTLCTSNVKRITYLKRKSNQLIAASNGCSLSVQNPDKTQ 1587
P S NGL G N L +SN +I Y+KRK+NQ + AS+ + ++
Sbjct: 845 MDP-----SANGLP--GSSNLPKLESSNPSKILYVKRKANQFVTASD-----MHGASNSR 892
Query: 1588 STASDGYYKRRKNQLIRTPLESHINQTVSLADGSFTSEGEKCAKDIFRRSD-MSQSYKAV 1646
Y++R K+QL+R ES NQ L+D + S + AK + +RS ++ S A+
Sbjct: 893 IPPCVSYFRRSKSQLVRDS-ESLANQEKFLSDEA--SNSQTAAKMVSKRSSSLALSEFAI 949
Query: 1647 KKICKPIRFSLVWTLNSMQSSKSDDHFLYRGKVLPSLFPWKRTLYWRRFVQDPVSISNNS 1706
+ FSLVWTL S K++ + K++P WKR+ YWRR + +P S+ N
Sbjct: 950 VRPFNHFNFSLVWTLKEPISRKANRVHISLQKMVPQPVSWKRSTYWRRLM-NPASVLLNG 1008
Query: 1707 SLSAISRKLLLLRKRDTVYTRSNHGFSLRKYKVLSVGGSSLKWSKSIENRSKKVNEEATL 1766
S S S + H S RK +++ + T+
Sbjct: 1009 SFSIAS-------------LMTEHSISSRKLRMM--------------------RKRHTI 1035
Query: 1767 AVAAVEKKRQENGAESFASETKIRIRSCRERIFRIGSVRYKMDSS----RRTLQRISDDS 1822
R NG S TK ++ IG +K S + + +SD
Sbjct: 1036 YT------RSTNGC----SLTK-------SKVLSIGGSHFKWSKSIERGSKKPEFLSDIE 1078
Query: 1823 SPCAAGPTLEKNAKKSYIPRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHT 1882
S + K+ K S P+RLVI ND+ V I N +QL RDPK+R VL +EKVRWSL
Sbjct: 1079 SSRSCPSESMKDTKISSNPKRLVIKNDKSVWIRNCDQLARDPKKRTCVLTNEKVRWSLIN 1138
Query: 1883 ARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVI 1942
RLR+A+K KYCQFFTRFGKCNKD+GKCPY+H+PSKIAVCTKFL GLC+N +CKLTHKV
Sbjct: 1139 VRLRVAKKMKYCQFFTRFGKCNKDDGKCPYVHNPSKIAVCTKFLSGLCANPECKLTHKV- 1197
Query: 1943 PERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFK 2002
+++ C +GLC N+ CPYRHVHV+ NA+ CEGFL+GYC+D +ECRKKH+Y CP F+
Sbjct: 1198 -QQLNHCP---RGLCNNEPCPYRHVHVHQNAAICEGFLRGYCSDENECRKKHTYTCPVFE 1253
Query: 2003 ATGSCALGAKCRLHHPKSRSNGKKSRRSRKP--KNTHGRYFGSMLVEDSESQTAMSERPT 2060
ATGSC G++C+LHHPK+ S GKKS+R+ + KN GRYFGS ES+
Sbjct: 1254 ATGSCPQGSECKLHHPKNLSKGKKSKRASESWHKNVSGRYFGSPHKHLPESEPMFVNE-- 1311
Query: 2061 VQNNGNLFVEGKLVDYIGLDVSDKEAGETNDALHELLDFNDSGASELQLDDLDELIKPIR 2120
V +G +F L D+I LD+++ A E+ D+ E +DS A D +DELI+P+
Sbjct: 1312 VAADGVVFGREAL-DFIRLDINEHNASESMDSSTEESVSDDSNAH----DSIDELIRPVG 1366
Query: 2121 IM 2122
+M
Sbjct: 1367 LM 1368
Score = 43.1 bits (100), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 19/120 (15%)
Query: 1291 VAQRTVSLPAQDVKDTGLTLNPMSGETNGKKHQASHCVSRIHPRRSSSVFTASRDLASST 1350
V V+LP D + + TL+ +S +T + ++ H + +P + D ++
Sbjct: 714 VNDYVVALPPPDSQ-SETTLSSISEKTQKRANKFIHVAQKSYP-----LHDIKED---AS 764
Query: 1351 RTTCTTRPRTWHRTESSSASPAPGNKSLLPPQNQLPKKVAKYQSMSYIRKGNSLVRKPAP 1410
T TWHR ++SASP K KV S +Y+RKGNSL+RKP+P
Sbjct: 765 PPISVTNHHTWHRKSTTSASPLVAVK----------PKVTVQCSSTYVRKGNSLLRKPSP 814
>gi|168010660|ref|XP_001758022.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690899|gb|EDQ77264.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 2054
Score = 327 bits (837), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 221/601 (36%), Positives = 303/601 (50%), Gaps = 67/601 (11%)
Query: 1539 GLESQGELNDGTLCTSNVKRITYLKRKSNQ-LIAASNGCSLSVQNPDKTQSTASDGYYKR 1597
++ G +D T + +++RK N+ + S + P + GY KR
Sbjct: 1495 AIKPSGRASDETFGYVVSGKKLFMQRKLNRSAVGPSTASASPSSRPGMEKCDVPLGYVKR 1554
Query: 1598 RKNQLIRTPLESHINQTVSLADGSFTSEGEKCAKDIFRRSDMSQSYKAVKKICKPIRFSL 1657
+ NQL+R H +++ S D F G++ K R+ S K K+ R S
Sbjct: 1555 KTNQLVRC---GHRHES-SANDALFQEVGDQ-MKSTSRQRKYSAQTKTKTKLG---RVSN 1606
Query: 1658 VWTLNSMQSSKSDDHFLYRGKVLPS----LFPWKRTLYWR---RFVQDPVSISNNSSLSA 1710
V+T S D KV+ LFPWKR R + P +
Sbjct: 1607 VYT--------SGDLICILLKVVADGRYPLFPWKRAKIVAPRLRRGRPPHEGKMGALFFH 1658
Query: 1711 ISRKLLLLRKRDTVYTRSNHGFSLRKYKVLSVGGSSLKWSKSIENRSKKVNEEATLAVAA 1770
I +L R VYTRS GFSL + V+S G++LKW+KS+ +S +E AT VA
Sbjct: 1659 IRNQLQKYRSGHPVYTRSADGFSLHRSGVVSRSGANLKWTKSLMTQSILASEAATKVVAE 1718
Query: 1771 VEKKRQENGAESFASETKIRIRSCRERIFRIGSVRYKMDSSRRTLQRISDDSSPCAAGPT 1830
EK++ R+ + + +++ RR+LQ DS A +
Sbjct: 1719 AEKEK---------------------RVKKEAVAKARVE--RRSLQ----DSDNQAKLYS 1751
Query: 1831 LEKNAKKSYIPRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARK 1890
IG YVR G GNQL+RD + ARV ASEKVRWSLH ARLR A+K
Sbjct: 1752 GSVEPSSVSSVESGGIGGAVYVRKGFGNQLVRDSRTTARVFASEKVRWSLHNARLRRAKK 1811
Query: 1891 RKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCS 1950
+ +C ++TRFG C + +GKC YIHDP K+AVCTKFL+G CS+ C+LTHKVIPERM DCS
Sbjct: 1812 QAFCVYYTRFGVCKRGDGKCLYIHDPEKVAVCTKFLRGSCSDPACRLTHKVIPERMSDCS 1871
Query: 1951 YFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALG 2010
YFL+GLCTN+NCPYRHV+VNP A CEGFL+GYC+DGD C KKH+YVCP + TG C+
Sbjct: 1872 YFLEGLCTNENCPYRHVNVNPKAPICEGFLQGYCSDGDMCNKKHTYVCPQYAVTGKCS-S 1930
Query: 2011 AKCRLHHPKSRSNGKKSRRSRKPKNTHGRYFGSMLVEDSESQTAMSERPTVQNNGNLFVE 2070
+ C+L HPK + + + GRYF + E Q V + G+ E
Sbjct: 1931 STCKLRHPKKKKQPTSTSKDNIGSKREGRYFAPTASAEGEYQ--RQHLCAVNDVGDKVTE 1988
Query: 2071 G--KLVDYIGLDVSD----KEAGETNDALHELLDFNDS----GASELQLDDLDE---LIK 2117
+ D+I +D D KE+ +T+ L+ F S G S L+DL + L+K
Sbjct: 1989 SGDERADFISIDELDSESPKESQDTDKLLYHRNVFLSSRLPKGGSTNALEDLLKPRFLLK 2048
Query: 2118 P 2118
P
Sbjct: 2049 P 2049
>gi|295913517|gb|ADG58007.1| transcription factor [Lycoris longituba]
Length = 198
Score = 230 bits (586), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 106/194 (54%), Positives = 147/194 (75%), Gaps = 11/194 (5%)
Query: 1918 KIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCE 1977
K+A+CTKFL+G+C+++ CKLTHK+IPERMPDCSYFLQGLCTN +CPYRHVHVNP AS C+
Sbjct: 4 KVAICTKFLRGVCTDATCKLTHKIIPERMPDCSYFLQGLCTNISCPYRHVHVNPKASVCD 63
Query: 1978 GFLKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSRKPKNTH 2037
GFL+GYCADGDEC KKHSYVCP F+ATG C G+KC+LHHPK R+N KK + + N
Sbjct: 64 GFLRGYCADGDECCKKHSYVCPLFEATGVCLQGSKCKLHHPKIRTNSKKRKHGKIQSNKK 123
Query: 2038 GRYFGSMLVEDSE-SQTAMSERPTV-QNNGNLF-VEGKLVDYIGLDV-SDKEAGETN--- 2090
GRYFGS +++ E +Q S+R + +N+ + F ++G+ ++I +D+ +D + G+TN
Sbjct: 124 GRYFGSSVIKGGEKTQVVASDRHAIAENDADPFCLDGQYAEFISIDIGNDSDDGKTNVSE 183
Query: 2091 ----DALHELLDFN 2100
++ ++LLD +
Sbjct: 184 DCTQESDYDLLDMH 197
>gi|405971141|gb|EKC35995.1| Zinc finger CCCH domain-containing protein 3 [Crassostrea gigas]
Length = 728
Score = 197 bits (502), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 87/166 (52%), Positives = 116/166 (69%), Gaps = 3/166 (1%)
Query: 1864 PKRRARVLASEKVRWSLHTARLRLARKR--KYCQFFTRFGKCNKDNGKCPYIHDPSKIAV 1921
P AR+LAS ++ S+HT + +KR +YC F+ RFGKCN+ + KC Y HDP K+AV
Sbjct: 102 PVANARILASRVLQRSIHTVATKSKKKRAEQYCMFYNRFGKCNRGD-KCKYRHDPEKVAV 160
Query: 1922 CTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLK 1981
CT+FL+G CS DC +HKV E+MP CSYFL+G+C+ +NCPY HV VN NA C+ FL+
Sbjct: 161 CTRFLRGTCSIVDCPFSHKVDKEKMPVCSYFLRGVCSRENCPYLHVKVNKNAEVCQDFLQ 220
Query: 1982 GYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKS 2027
G+C+ G +C K H+ VC F ATGSC GAKC+L H K ++ +KS
Sbjct: 221 GFCSKGAKCTKSHTLVCQMFAATGSCPDGAKCKLQHRKQKTRKRKS 266
>gi|189520842|ref|XP_689680.3| PREDICTED: zinc finger CCCH domain-containing protein 3 [Danio rerio]
Length = 929
Score = 186 bits (473), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 74/131 (56%), Positives = 97/131 (74%), Gaps = 3/131 (2%)
Query: 1893 YCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSD--CKLTHKVIPERMPDCS 1950
YC ++ RFGKCN N CPYIHDP K+AVCT+FL+G C +D C +HKV E+MP CS
Sbjct: 698 YCMYYNRFGKCNHGN-TCPYIHDPDKVAVCTRFLRGTCKKTDGTCPFSHKVAKEKMPVCS 756
Query: 1951 YFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALG 2010
YFL+G+C N +CPY HV+V+ A CE F++GYC GD+C+KKH+ VCP F +TG C G
Sbjct: 757 YFLKGICNNSSCPYSHVYVSRKAEVCEDFVRGYCPQGDKCKKKHTLVCPDFSSTGVCPRG 816
Query: 2011 AKCRLHHPKSR 2021
+KC+LHH +S+
Sbjct: 817 SKCKLHHRQSK 827
>gi|344255600|gb|EGW11704.1| Zinc finger CCCH domain-containing protein 3 [Cricetulus griseus]
Length = 964
Score = 185 bits (470), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/181 (46%), Positives = 117/181 (64%), Gaps = 9/181 (4%)
Query: 1863 DPKRRARVLASEKVRWSL---HTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKI 1919
DP +R LAS V+ SL A+ + +KR+YC ++ RFG+CN+ +CPYIHDP K+
Sbjct: 646 DPATSSRSLASRAVQRSLAIIRQAKQKKEKKREYCMYYNRFGRCNRGE-RCPYIHDPEKV 704
Query: 1920 AVCTKFLKGLCSNSD--CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCE 1977
AVCT+F++G C +D C +H V E+MP CSYFL+G+C+N NCPY HV+V+ A C
Sbjct: 705 AVCTRFVRGTCKKTDGSCPFSHHVSKEKMPVCSYFLKGICSNSNCPYSHVYVSRKAEVCS 764
Query: 1978 GFLKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSRKPKNTH 2037
FLKGYC G +C+KKH+ +CP F G C GA+C+L H R+ + RR+ P T
Sbjct: 765 DFLKGYCPLGAKCKKKHTLLCPDFARRGICPRGAQCQLLH---RNQKRHGRRTAAPTATP 821
Query: 2038 G 2038
G
Sbjct: 822 G 822
>gi|354496742|ref|XP_003510484.1| PREDICTED: zinc finger CCCH domain-containing protein 3 [Cricetulus
griseus]
Length = 950
Score = 185 bits (470), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/181 (46%), Positives = 117/181 (64%), Gaps = 9/181 (4%)
Query: 1863 DPKRRARVLASEKVRWSL---HTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKI 1919
DP +R LAS V+ SL A+ + +KR+YC ++ RFG+CN+ +CPYIHDP K+
Sbjct: 632 DPATSSRSLASRAVQRSLAIIRQAKQKKEKKREYCMYYNRFGRCNRGE-RCPYIHDPEKV 690
Query: 1920 AVCTKFLKGLCSNSD--CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCE 1977
AVCT+F++G C +D C +H V E+MP CSYFL+G+C+N NCPY HV+V+ A C
Sbjct: 691 AVCTRFVRGTCKKTDGSCPFSHHVSKEKMPVCSYFLKGICSNSNCPYSHVYVSRKAEVCS 750
Query: 1978 GFLKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSRKPKNTH 2037
FLKGYC G +C+KKH+ +CP F G C GA+C+L H R+ + RR+ P T
Sbjct: 751 DFLKGYCPLGAKCKKKHTLLCPDFARRGICPRGAQCQLLH---RNQKRHGRRTAAPTATP 807
Query: 2038 G 2038
G
Sbjct: 808 G 808
>gi|345316516|ref|XP_001518934.2| PREDICTED: zinc finger CCCH domain-containing protein 3-like
[Ornithorhynchus anatinus]
Length = 1116
Score = 184 bits (467), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 88/188 (46%), Positives = 122/188 (64%), Gaps = 12/188 (6%)
Query: 1837 KSY-IPRRLVIGNDEYV-RIGNGNQLIRDPKRRARVLASEKVRWSL---HTARLRLARKR 1891
K+Y IP + G+ Y+ R G+ + L +R +AS V+ SL AR R +K+
Sbjct: 900 KTYSIPLKASDGSTRYLSRTGHLDPLTAT----SRSIASRAVQRSLAIIRQARQRKEKKK 955
Query: 1892 KYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSD--CKLTHKVIPERMPDC 1949
YC ++ RFG+CN+ CPYIHDP K+AVCT+FL+G C +D C +HKV ++MP C
Sbjct: 956 DYCMYYNRFGRCNRGL-SCPYIHDPDKVAVCTRFLRGTCKKTDGSCPFSHKVSKDKMPVC 1014
Query: 1950 SYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCAL 2009
SYFL+G+C+N NCPY HV+V+ A C+ FLKGYC G++C+KKH+ +CP F GSC
Sbjct: 1015 SYFLKGICSNSNCPYSHVYVSRKAEVCQDFLKGYCPMGEKCKKKHTLLCPDFAKKGSCPR 1074
Query: 2010 GAKCRLHH 2017
G KC+L H
Sbjct: 1075 GGKCKLLH 1082
>gi|348533173|ref|XP_003454080.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
[Oreochromis niloticus]
Length = 425
Score = 184 bits (466), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 110/286 (38%), Positives = 158/286 (55%), Gaps = 38/286 (13%)
Query: 1869 RVLASEKVRWSLHTAR--LRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFL 1926
R LAS V+ SL R + R+++YC ++ RFGKCN+ CP+IHDP K+AVCT+FL
Sbjct: 106 RHLASRAVQRSLAIIRHARQKQRQKQYCMYYNRFGKCNRGTS-CPFIHDPDKVAVCTRFL 164
Query: 1927 KGLCSNSD--CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYC 1984
+G C +D C +HKV E+MP CSYFL+G+C N +CPY HV+V+ A C+ F+KGYC
Sbjct: 165 RGTCKQADGTCPFSHKVAKEKMPVCSYFLKGICNNSDCPYSHVYVSRKAEVCQDFVKGYC 224
Query: 1985 ADGDECRKKHSYVCPTFKATGSCALGAKCRLHH---PKSRSN------GKKSRRSRKPKN 2035
+G++C+KKH+ VCP F TGSC G++C+L H K R++ KK+R K
Sbjct: 225 PEGEKCKKKHTLVCPDFSKTGSCPHGSRCKLQHRQRVKRRASNTVTPPAKKARSKEPLKR 284
Query: 2036 THGRYFGSMLVEDSESQTAMSERPTVQNNGNLFVEGKLVDYIGLDVSDKEAGETN----D 2091
H ++ +DS++ M + G+L L +I L S +EA + D
Sbjct: 285 PH---LSVVMPQDSQASLGMP------STGSLV----LPSFISLSSSPEEADAPDMLPTD 331
Query: 2092 AL-----HELLDFNDSGASELQLDD--LDELIKPIRIMNSHPSSYS 2130
A+ H L S E+ L D E K +R ++ SYS
Sbjct: 332 AVQIKDRHFLPHMYHSSVGEMVLRDAATAEEAKRVRCSDAQFKSYS 377
>gi|332831304|ref|XP_519998.3| PREDICTED: zinc finger CCCH domain-containing protein 3 [Pan
troglodytes]
Length = 952
Score = 182 bits (462), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 124/201 (61%), Gaps = 6/201 (2%)
Query: 1868 ARVLASEKVRWSL---HTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTK 1924
+R LAS V+ SL AR R ++++YC ++ RFG+CN+ +CPYIHDP K+AVCT+
Sbjct: 644 SRSLASRAVQRSLAIIRQARQRREKRKEYCMYYNRFGRCNRGE-RCPYIHDPEKVAVCTR 702
Query: 1925 FLKGLCSNSD--CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKG 1982
F++G C +D C +H V E+MP CSYFL+G+C+N NCPY HV+V+ A C FLKG
Sbjct: 703 FVRGTCKKTDGTCPFSHHVSKEKMPVCSYFLKGICSNSNCPYSHVYVSRKAEVCSDFLKG 762
Query: 1983 YCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSRKPKNTHGRYFG 2042
YC G +C+KKH+ +CP F G+C GA+C+L H + + +++ S P +
Sbjct: 763 YCPLGAKCKKKHTLLCPDFARRGACPRGAQCQLLHRTQKRHSRRAATSPAPGPSDATARS 822
Query: 2043 SMLVEDSESQTAMSERPTVQN 2063
+ + + S+RPT Q
Sbjct: 823 RVSASHGPRKPSASQRPTRQT 843
>gi|119602655|gb|EAW82249.1| zinc finger CCCH-type containing 3 [Homo sapiens]
Length = 962
Score = 182 bits (462), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 124/201 (61%), Gaps = 6/201 (2%)
Query: 1868 ARVLASEKVRWSL---HTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTK 1924
+R LAS V+ SL AR R ++++YC ++ RFG+CN+ +CPYIHDP K+AVCT+
Sbjct: 658 SRSLASRAVQRSLAIIRQARQRREKRKEYCMYYNRFGRCNRGE-RCPYIHDPEKVAVCTR 716
Query: 1925 FLKGLCSNSD--CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKG 1982
F++G C +D C +H V E+MP CSYFL+G+C+N NCPY HV+V+ A C FLKG
Sbjct: 717 FVRGTCKKTDGTCPFSHHVSKEKMPVCSYFLKGICSNSNCPYSHVYVSRKAEVCSDFLKG 776
Query: 1983 YCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSRKPKNTHGRYFG 2042
YC G +C+KKH+ +CP F G+C GA+C+L H + + +++ S P +
Sbjct: 777 YCPLGAKCKKKHTLLCPDFARRGACPRGAQCQLLHRTQKRHSRRAATSPAPGPSDATARS 836
Query: 2043 SMLVEDSESQTAMSERPTVQN 2063
+ + + S+RPT Q
Sbjct: 837 RVSASHGPRKPSASQRPTRQT 857
>gi|155722994|ref|NP_055932.2| zinc finger CCCH domain-containing protein 3 [Homo sapiens]
gi|308153538|sp|Q8IXZ2.3|ZC3H3_HUMAN RecName: Full=Zinc finger CCCH domain-containing protein 3
Length = 948
Score = 182 bits (462), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 124/201 (61%), Gaps = 6/201 (2%)
Query: 1868 ARVLASEKVRWSL---HTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTK 1924
+R LAS V+ SL AR R ++++YC ++ RFG+CN+ +CPYIHDP K+AVCT+
Sbjct: 644 SRSLASRAVQRSLAIIRQARQRREKRKEYCMYYNRFGRCNRGE-RCPYIHDPEKVAVCTR 702
Query: 1925 FLKGLCSNSD--CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKG 1982
F++G C +D C +H V E+MP CSYFL+G+C+N NCPY HV+V+ A C FLKG
Sbjct: 703 FVRGTCKKTDGTCPFSHHVSKEKMPVCSYFLKGICSNSNCPYSHVYVSRKAEVCSDFLKG 762
Query: 1983 YCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSRKPKNTHGRYFG 2042
YC G +C+KKH+ +CP F G+C GA+C+L H + + +++ S P +
Sbjct: 763 YCPLGAKCKKKHTLLCPDFARRGACPRGAQCQLLHRTQKRHSRRAATSPAPGPSDATARS 822
Query: 2043 SMLVEDSESQTAMSERPTVQN 2063
+ + + S+RPT Q
Sbjct: 823 RVSASHGPRKPSASQRPTRQT 843
>gi|168274410|dbj|BAG09625.1| zinc finger CCCH-type containing protein 3 [synthetic construct]
Length = 948
Score = 182 bits (462), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 124/201 (61%), Gaps = 6/201 (2%)
Query: 1868 ARVLASEKVRWSL---HTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTK 1924
+R LAS V+ SL AR R ++++YC ++ RFG+CN+ +CPYIHDP K+AVCT+
Sbjct: 644 SRSLASRAVQRSLAIIRQARQRREKRKEYCMYYNRFGRCNRGE-RCPYIHDPEKVAVCTR 702
Query: 1925 FLKGLCSNSD--CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKG 1982
F++G C +D C +H V E+MP CSYFL+G+C+N NCPY HV+V+ A C FLKG
Sbjct: 703 FVRGTCKKTDGTCPFSHHVSKEKMPVCSYFLKGICSNSNCPYSHVYVSRKAEVCSDFLKG 762
Query: 1983 YCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSRKPKNTHGRYFG 2042
YC G +C+KKH+ +CP F G+C GA+C+L H + + +++ S P +
Sbjct: 763 YCPLGAKCKKKHTLLCPDFARRGACPRGAQCQLLHRTQKRHSRRAATSPAPGPSDATARS 822
Query: 2043 SMLVEDSESQTAMSERPTVQN 2063
+ + + S+RPT Q
Sbjct: 823 RVSASHGPRKPSASQRPTRQT 843
>gi|410295430|gb|JAA26315.1| zinc finger CCCH-type containing 3 [Pan troglodytes]
Length = 952
Score = 182 bits (462), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 124/201 (61%), Gaps = 6/201 (2%)
Query: 1868 ARVLASEKVRWSL---HTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTK 1924
+R LAS V+ SL AR R ++++YC ++ RFG+CN+ +CPYIHDP K+AVCT+
Sbjct: 644 SRSLASRAVQRSLAIIRQARQRREKRKEYCMYYNRFGRCNRGE-RCPYIHDPEKVAVCTR 702
Query: 1925 FLKGLCSNSD--CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKG 1982
F++G C +D C +H V E+MP CSYFL+G+C+N NCPY HV+V+ A C FLKG
Sbjct: 703 FVRGTCKKTDGTCPFSHHVSKEKMPVCSYFLKGICSNSNCPYSHVYVSRKAEVCSDFLKG 762
Query: 1983 YCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSRKPKNTHGRYFG 2042
YC G +C+KKH+ +CP F G+C GA+C+L H + + +++ S P +
Sbjct: 763 YCPLGAKCKKKHTLLCPDFARRGACPRGAQCQLLHRTQKRHSRRAATSPAPGPSDATARS 822
Query: 2043 SMLVEDSESQTAMSERPTVQN 2063
+ + + S+RPT Q
Sbjct: 823 RVSASHGPRKPSASQRPTRQT 843
>gi|410212978|gb|JAA03708.1| zinc finger CCCH-type containing 3 [Pan troglodytes]
gi|410265676|gb|JAA20804.1| zinc finger CCCH-type containing 3 [Pan troglodytes]
gi|410339641|gb|JAA38767.1| zinc finger CCCH-type containing 3 [Pan troglodytes]
Length = 952
Score = 182 bits (462), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 124/201 (61%), Gaps = 6/201 (2%)
Query: 1868 ARVLASEKVRWSL---HTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTK 1924
+R LAS V+ SL AR R ++++YC ++ RFG+CN+ +CPYIHDP K+AVCT+
Sbjct: 644 SRSLASRAVQRSLAIIRQARQRREKRKEYCMYYNRFGRCNRGE-RCPYIHDPEKVAVCTR 702
Query: 1925 FLKGLCSNSD--CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKG 1982
F++G C +D C +H V E+MP CSYFL+G+C+N NCPY HV+V+ A C FLKG
Sbjct: 703 FVRGTCKKTDGTCPFSHHVSKEKMPVCSYFLKGICSNSNCPYSHVYVSRKAEVCSDFLKG 762
Query: 1983 YCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSRKPKNTHGRYFG 2042
YC G +C+KKH+ +CP F G+C GA+C+L H + + +++ S P +
Sbjct: 763 YCPLGAKCKKKHTLLCPDFARRGACPRGAQCQLLHRTQKRHSRRAATSPAPGPSDATARS 822
Query: 2043 SMLVEDSESQTAMSERPTVQN 2063
+ + + S+RPT Q
Sbjct: 823 RVSASHGPRKPSASQRPTRQT 843
>gi|1469882|dbj|BAA09771.1| KIAA0150 [Homo sapiens]
Length = 944
Score = 182 bits (462), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 124/201 (61%), Gaps = 6/201 (2%)
Query: 1868 ARVLASEKVRWSL---HTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTK 1924
+R LAS V+ SL AR R ++++YC ++ RFG+CN+ +CPYIHDP K+AVCT+
Sbjct: 640 SRSLASRAVQRSLAIIRQARQRREKRKEYCMYYNRFGRCNRGE-RCPYIHDPEKVAVCTR 698
Query: 1925 FLKGLCSNSD--CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKG 1982
F++G C +D C +H V E+MP CSYFL+G+C+N NCPY HV+V+ A C FLKG
Sbjct: 699 FVRGTCKKTDGTCPFSHHVSKEKMPVCSYFLKGICSNSNCPYSHVYVSRKAEVCSDFLKG 758
Query: 1983 YCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSRKPKNTHGRYFG 2042
YC G +C+KKH+ +CP F G+C GA+C+L H + + +++ S P +
Sbjct: 759 YCPLGAKCKKKHTLLCPDFARRGACPRGAQCQLLHRTQKRHSRRAATSPAPGPSDATARS 818
Query: 2043 SMLVEDSESQTAMSERPTVQN 2063
+ + + S+RPT Q
Sbjct: 819 RVSASHGPRKPSASQRPTRQT 839
>gi|355698264|gb|EHH28812.1| Zinc finger CCCH domain-containing protein 3 [Macaca mulatta]
gi|383416845|gb|AFH31636.1| zinc finger CCCH domain-containing protein 3 [Macaca mulatta]
Length = 950
Score = 182 bits (462), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 114/168 (67%), Gaps = 9/168 (5%)
Query: 1868 ARVLASEKVRWSL---HTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTK 1924
+R LAS V+ SL AR R ++++YC ++ RFG+CN+ +CPYIHDP K+AVCT+
Sbjct: 644 SRSLASRAVQRSLAIIRQARQRREKRKEYCMYYNRFGRCNRGE-RCPYIHDPEKVAVCTR 702
Query: 1925 FLKGLCSNSD--CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKG 1982
F++G C +D C +H V E+MP CSYFL+G+C+N NCPY HV+V+ A C FLKG
Sbjct: 703 FVRGTCKKTDGTCPFSHHVSKEKMPVCSYFLKGICSNSNCPYSHVYVSRKAEVCSDFLKG 762
Query: 1983 YCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRS 2030
YC G +C+KKH+ +CP F G+C GA+C+L H R+ + SRR+
Sbjct: 763 YCPLGAKCKKKHTLLCPDFARRGACPRGAQCQLLH---RTQKRHSRRA 807
>gi|402879317|ref|XP_003903291.1| PREDICTED: zinc finger CCCH domain-containing protein 3 [Papio
anubis]
Length = 950
Score = 182 bits (461), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 114/168 (67%), Gaps = 9/168 (5%)
Query: 1868 ARVLASEKVRWSL---HTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTK 1924
+R LAS V+ SL AR R ++++YC ++ RFG+CN+ +CPYIHDP K+AVCT+
Sbjct: 644 SRSLASRAVQRSLAIIRQARQRREKRKEYCMYYNRFGRCNRGE-RCPYIHDPEKVAVCTR 702
Query: 1925 FLKGLCSNSD--CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKG 1982
F++G C +D C +H V E+MP CSYFL+G+C+N NCPY HV+V+ A C FLKG
Sbjct: 703 FVRGTCKKTDGTCPFSHHVSKEKMPVCSYFLKGICSNSNCPYSHVYVSRKAEVCSDFLKG 762
Query: 1983 YCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRS 2030
YC G +C+KKH+ +CP F G+C GA+C+L H R+ + SRR+
Sbjct: 763 YCPLGAKCKKKHTLLCPDFARRGACPRGAQCQLLH---RTQKRHSRRA 807
>gi|297300217|ref|XP_001097060.2| PREDICTED: zinc finger CCCH domain-containing protein 3 [Macaca
mulatta]
Length = 940
Score = 182 bits (461), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 114/168 (67%), Gaps = 9/168 (5%)
Query: 1868 ARVLASEKVRWSL---HTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTK 1924
+R LAS V+ SL AR R ++++YC ++ RFG+CN+ +CPYIHDP K+AVCT+
Sbjct: 644 SRSLASRAVQRSLAIIRQARQRREKRKEYCMYYNRFGRCNRGE-RCPYIHDPEKVAVCTR 702
Query: 1925 FLKGLCSNSD--CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKG 1982
F++G C +D C +H V E+MP CSYFL+G+C+N NCPY HV+V+ A C FLKG
Sbjct: 703 FVRGTCKKTDGTCPFSHHVSKEKMPVCSYFLKGICSNSNCPYSHVYVSRKAEVCSDFLKG 762
Query: 1983 YCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRS 2030
YC G +C+KKH+ +CP F G+C GA+C+L H R+ + SRR+
Sbjct: 763 YCPLGAKCKKKHTLLCPDFARRGACPRGAQCQLLH---RTQKRHSRRA 807
>gi|403302962|ref|XP_003942117.1| PREDICTED: zinc finger CCCH domain-containing protein 3 [Saimiri
boliviensis boliviensis]
Length = 954
Score = 182 bits (461), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 90/214 (42%), Positives = 128/214 (59%), Gaps = 16/214 (7%)
Query: 1868 ARVLASEKVRWSL---HTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTK 1924
+R LAS V+ SL AR R +K+++C ++ RFG+CN+ +CPYIHDP K+AVCT+
Sbjct: 644 SRSLASRAVQRSLAIIRQARQRREKKKEFCMYYNRFGRCNRGE-RCPYIHDPEKVAVCTR 702
Query: 1925 FLKGLCSNSD--CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKG 1982
F++G C +D C +H V E+MP CSYFL+G+C+N NCPY HV+V+ A C FLKG
Sbjct: 703 FVRGTCKKTDGTCPFSHHVSKEKMPVCSYFLKGICSNSNCPYSHVYVSRKAEVCSDFLKG 762
Query: 1983 YCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSRK-----PKNTH 2037
YC G +C+KKH+ +CP F GSC G +C+L H R+ + SRR+ P +T
Sbjct: 763 YCPLGAKCKKKHTLLCPDFARRGSCPRGTQCQLLH---RTQKRHSRRAATSPAPGPSDTA 819
Query: 2038 GRYFGSMLVEDSESQTAMSERPTVQNNGNLFVEG 2071
R S + ++RPT Q + + G
Sbjct: 820 ARSRAS--ASHGPRKPLAAQRPTRQTPSSPALTG 851
>gi|355779993|gb|EHH64469.1| Zinc finger CCCH domain-containing protein 3, partial [Macaca
fascicularis]
Length = 938
Score = 182 bits (461), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 114/168 (67%), Gaps = 9/168 (5%)
Query: 1868 ARVLASEKVRWSL---HTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTK 1924
+R LAS V+ SL AR R ++++YC ++ RFG+CN+ +CPYIHDP K+AVCT+
Sbjct: 632 SRSLASRAVQRSLAIIRQARQRREKRKEYCMYYNRFGRCNRGE-RCPYIHDPEKVAVCTR 690
Query: 1925 FLKGLCSNSD--CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKG 1982
F++G C +D C +H V E+MP CSYFL+G+C+N NCPY HV+V+ A C FLKG
Sbjct: 691 FVRGTCKKTDGTCPFSHHVSKEKMPVCSYFLKGICSNSNCPYSHVYVSRKAEVCSDFLKG 750
Query: 1983 YCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRS 2030
YC G +C+KKH+ +CP F G+C GA+C+L H R+ + SRR+
Sbjct: 751 YCPLGAKCKKKHTLLCPDFARRGACPRGAQCQLLH---RTQKRHSRRA 795
>gi|449495327|ref|XP_002187164.2| PREDICTED: zinc finger CCCH domain-containing protein 3 [Taeniopygia
guttata]
Length = 1136
Score = 181 bits (460), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 79/157 (50%), Positives = 109/157 (69%), Gaps = 5/157 (3%)
Query: 1869 RVLASEKVRWSLHTAR--LRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFL 1926
R +AS V+ SL R + +K++YC ++ RFGKCN+ CPYIHDP K+AVCT+FL
Sbjct: 756 RYIASRAVQRSLAIIRQAKQKKKKKEYCMYYNRFGKCNRGES-CPYIHDPEKVAVCTRFL 814
Query: 1927 KGLCSNSD--CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYC 1984
+G C +D C +HKV ++MP CSY+L+G+C+N NCPY HV+V+ A C+ FLKGYC
Sbjct: 815 RGTCKKTDGTCPFSHKVSKDKMPVCSYYLKGICSNSNCPYSHVYVSRKAEVCQDFLKGYC 874
Query: 1985 ADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSR 2021
G++C+KKH+ VCP F G C GA+C+L HP+ R
Sbjct: 875 PMGEKCKKKHTLVCPDFAKKGVCPKGAQCKLLHPQKR 911
>gi|397497396|ref|XP_003819497.1| PREDICTED: zinc finger CCCH domain-containing protein 3 [Pan
paniscus]
Length = 952
Score = 180 bits (456), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/201 (41%), Positives = 123/201 (61%), Gaps = 6/201 (2%)
Query: 1868 ARVLASEKVRWSL---HTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTK 1924
+R LAS V+ SL AR R ++++YC ++ RFG+C + +CPYIHDP K+AVCT+
Sbjct: 644 SRSLASRAVQRSLAIIRQARQRREKRKEYCMYYNRFGRCKRGE-RCPYIHDPEKVAVCTR 702
Query: 1925 FLKGLCSNSD--CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKG 1982
F++G C +D C +H V E+MP CSYFL+G+C+N NCPY HV+V+ A C FLKG
Sbjct: 703 FVRGTCKKTDGTCPFSHHVSKEKMPVCSYFLKGICSNSNCPYSHVYVSRKAEVCSDFLKG 762
Query: 1983 YCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSRKPKNTHGRYFG 2042
YC G +C+KKH+ +CP F G+C GA+C+L H + + +++ S P +
Sbjct: 763 YCPLGAKCKKKHTLLCPDFARRGACPRGAQCQLLHRTQKRHSRRAATSPAPGPSDATTRS 822
Query: 2043 SMLVEDSESQTAMSERPTVQN 2063
+ + + S+RPT Q
Sbjct: 823 RVSASHGPRKPSASQRPTRQT 843
>gi|326918190|ref|XP_003205374.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
[Meleagris gallopavo]
Length = 953
Score = 179 bits (454), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 80/159 (50%), Positives = 108/159 (67%), Gaps = 6/159 (3%)
Query: 1868 ARVLASEKVRWSLHTAR---LRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTK 1924
+R +AS V+ SL R + +K++YC ++ RFGKCN+ CPYIHDP K+AVCT+
Sbjct: 665 SRYIASRAVQRSLAIIRQAKQKKEKKKEYCMYYNRFGKCNRGEN-CPYIHDPEKVAVCTR 723
Query: 1925 FLKGLCSNSD--CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKG 1982
FL+G C +D C +HKV ++MP CSYFL+G+C N NCPY HV+V+ A C+ FLKG
Sbjct: 724 FLRGTCKKTDGKCPFSHKVSKDKMPVCSYFLKGICNNSNCPYSHVYVSRKAEVCQDFLKG 783
Query: 1983 YCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSR 2021
YC G++C+KKH+ VCP F G C GA C+L HPK +
Sbjct: 784 YCPMGEKCKKKHTLVCPDFAKKGICPRGACCKLLHPKKK 822
>gi|291238825|ref|XP_002739326.1| PREDICTED: Smad-interacting and CPSF-like protein-like [Saccoglossus
kowalevskii]
Length = 858
Score = 179 bits (454), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/219 (39%), Positives = 133/219 (60%), Gaps = 14/219 (6%)
Query: 1805 RYKMDSSRRTLQRISDD--SSPCAAGPTLEKNAKKSYIPRRLVIGNDEYVRIGNGNQLIR 1862
R+ MD S RTL+R + S P+ +K R+ IG +V+ G L+R
Sbjct: 542 RFIMDPSGRTLKRDQGEERSKQLVTVPSGDKGLS------RVDIGGITFVQTTPGT-LVR 594
Query: 1863 DPKRRARVLASEKVRWSLHTA---RLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKI 1919
+ +A ++ S+ T+ + + ++ +++C F+ RFGKCN+ N KCPYIHDP K+
Sbjct: 595 KDNEHTKAIAHRVLQRSIQTSNAMKWKKSKPKQFCMFYNRFGKCNRGN-KCPYIHDPDKV 653
Query: 1920 AVCTKFLKGLCSN-SDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEG 1978
AVCT+FL+G C + + C+ +HKV ++MP CS+FL+G+C +CPY HV+V+ A+ C+
Sbjct: 654 AVCTRFLRGTCKDGASCQFSHKVSKDKMPVCSFFLRGVCNRDDCPYLHVNVSRKAAVCQD 713
Query: 1979 FLKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
FLKGYC G +C+++H CP F TG C G KC++ H
Sbjct: 714 FLKGYCPQGQKCKERHILECPEFSRTGRCPDGDKCKMAH 752
>gi|71896131|ref|NP_001026756.1| zinc finger CCCH domain-containing protein 3 [Gallus gallus]
gi|60098725|emb|CAH65193.1| hypothetical protein RCJMB04_7c5 [Gallus gallus]
Length = 956
Score = 179 bits (453), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 80/159 (50%), Positives = 108/159 (67%), Gaps = 6/159 (3%)
Query: 1868 ARVLASEKVRWSLHTAR---LRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTK 1924
+R +AS V+ SL R + +K++YC ++ RFGKCN+ CPYIHDP K+AVCT+
Sbjct: 665 SRYIASRAVQRSLAIIRQAKQKKEKKKEYCMYYNRFGKCNRGEN-CPYIHDPEKVAVCTR 723
Query: 1925 FLKGLCSNSD--CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKG 1982
FL+G C +D C +HKV ++MP CSYFL+G+C N NCPY HV+V+ A C+ FLKG
Sbjct: 724 FLRGTCKKTDGKCPFSHKVSKDKMPVCSYFLKGICNNSNCPYSHVYVSRKAEVCQDFLKG 783
Query: 1983 YCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSR 2021
YC G++C+KKH+ VCP F G C GA C+L HPK +
Sbjct: 784 YCPMGEKCKKKHTLVCPDFAKKGICPRGACCKLLHPKKK 822
>gi|24217449|gb|AAH38670.1| Zinc finger CCCH-type containing 3 [Homo sapiens]
Length = 948
Score = 178 bits (451), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 83/201 (41%), Positives = 123/201 (61%), Gaps = 6/201 (2%)
Query: 1868 ARVLASEKVRWSL---HTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTK 1924
+R LAS V+ SL AR R ++++YC ++ RFG+CN+ +CPYIHDP K+AVCT+
Sbjct: 644 SRSLASRAVQRSLAIIRQARQRREKRKEYCMYYNRFGRCNRGE-RCPYIHDPEKVAVCTR 702
Query: 1925 FLKGLCSNSD--CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKG 1982
F++G C +D C +H V E+M CSYFL+G+C+N NCPY HV+V+ A C FLKG
Sbjct: 703 FVRGTCKKTDGTCPFSHHVSKEKMRVCSYFLKGICSNSNCPYSHVYVSRKAEVCSDFLKG 762
Query: 1983 YCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSRKPKNTHGRYFG 2042
YC G +C+KKH+ +CP F G+C GA+C+L H + + +++ S P +
Sbjct: 763 YCPLGAKCKKKHTLLCPDFARRGACPRGAQCQLLHRTQKRHSRRAATSPAPGPSDATARS 822
Query: 2043 SMLVEDSESQTAMSERPTVQN 2063
+ + + S+RPT Q
Sbjct: 823 RVSASHGPRKPSASQRPTRQT 843
>gi|348555814|ref|XP_003463718.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like [Cavia
porcellus]
Length = 957
Score = 177 bits (450), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 88/193 (45%), Positives = 122/193 (63%), Gaps = 16/193 (8%)
Query: 1853 RIGNGNQ--LIR----DPKRR-ARVLASEKVRWSL---HTARLRLARKRKYCQFFTRFGK 1902
R+G+G L+R DP +R LAS V+ SL AR + ++++YC ++ RFG+
Sbjct: 625 RLGDGGNRTLLRSGRLDPASNCSRSLASRAVQRSLAIIRQARQKKEKRKEYCMYYNRFGR 684
Query: 1903 CNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSD--CKLTHKVIPERMPDCSYFLQGLCTNK 1960
CN+ CPYIHDP K+AVCT+FL+G C +D C +H V ++MP CSYFL+G+C N
Sbjct: 685 CNRGE-LCPYIHDPEKVAVCTRFLRGTCKKTDGTCPFSHHVSKDKMPVCSYFLKGICNNS 743
Query: 1961 NCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKS 2020
NCPY HV+V+ A C FLKGYC G +C+KKH+ +CP F G C GA+C+L H
Sbjct: 744 NCPYSHVYVSRKAEVCSDFLKGYCPLGAKCKKKHTLLCPDFARRGMCPRGAQCQLLH--- 800
Query: 2021 RSNGKKSRRSRKP 2033
R+ + SRR+ P
Sbjct: 801 RNQKQHSRRAAMP 813
>gi|194215161|ref|XP_001917098.1| PREDICTED: zinc finger CCCH domain-containing protein 3 [Equus
caballus]
Length = 972
Score = 177 bits (449), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 103/156 (66%), Gaps = 7/156 (4%)
Query: 1868 ARVLASEKVRWSLHTARLRLARKRK----YCQFFTRFGKCNKDNGKCPYIHDPSKIAVCT 1923
+R LAS V+ SL R +KR+ YC ++ RFG+C + G CPYIHDP K+AVCT
Sbjct: 645 SRSLASRAVQRSLAIVRQARQKKRRKKEEYCMYYNRFGRCKRGEG-CPYIHDPEKVAVCT 703
Query: 1924 KFLKGLCSNSD--CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLK 1981
+F++G C +D C +H V E+MP CSYFL+G+C+N NCPY HV+V+ A C FLK
Sbjct: 704 RFVRGTCKKTDGTCPFSHHVSKEKMPVCSYFLKGICSNSNCPYSHVYVSRKAEVCADFLK 763
Query: 1982 GYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
GYC G +C++KH+ +CP F G C GA+C+L H
Sbjct: 764 GYCPLGAKCKRKHTLLCPDFSRRGVCPRGAQCQLLH 799
>gi|351698445|gb|EHB01364.1| Zinc finger CCCH domain-containing protein 3 [Heterocephalus glaber]
Length = 934
Score = 177 bits (448), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 88/193 (45%), Positives = 123/193 (63%), Gaps = 16/193 (8%)
Query: 1853 RIGNGNQ--LIR----DPKRR-ARVLASEKVRWSL---HTARLRLARKRKYCQFFTRFGK 1902
R+G+G L+R DP +R LAS V+ SL AR + +K++YC ++ RFG+
Sbjct: 609 RLGDGGSRALLRSGRLDPASNCSRSLASRAVQRSLAIIRQARQKKEKKKEYCMYYNRFGR 668
Query: 1903 CNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSD--CKLTHKVIPERMPDCSYFLQGLCTNK 1960
CN+ CPYIHDP K+AVCT+F++G C +D C +H V ++MP CSYFL+G+C N
Sbjct: 669 CNRGE-HCPYIHDPEKVAVCTRFVRGTCKKTDGTCPFSHHVSKDKMPVCSYFLKGICNNS 727
Query: 1961 NCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKS 2020
NCPY HV+V+ A C FLKGYC G +C+KKH+ +CP F G+C GA+C+L H
Sbjct: 728 NCPYSHVYVSRKAEVCSDFLKGYCPLGAKCKKKHTLLCPDFARRGTCPRGAQCQLPH--- 784
Query: 2021 RSNGKKSRRSRKP 2033
R+ +SRR+ P
Sbjct: 785 RNQKHQSRRAAMP 797
>gi|26006471|ref|NP_742119.1| zinc finger CCCH domain-containing protein 3 [Mus musculus]
gi|47117561|sp|Q8CHP0.1|ZC3H3_MOUSE RecName: Full=Zinc finger CCCH domain-containing protein 3
gi|25137105|emb|CAD56773.1| hypothetical KIAA0150 protein [Mus musculus]
gi|38511401|gb|AAH60682.1| Zinc finger CCCH type containing 3 [Mus musculus]
gi|74209796|dbj|BAE23611.1| unnamed protein product [Mus musculus]
Length = 950
Score = 177 bits (448), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 111/165 (67%), Gaps = 6/165 (3%)
Query: 1868 ARVLASEKVRWSL---HTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTK 1924
+R LAS ++ SL A+ + +KR+YC ++ RFG+CN+ CPYIHDP K+AVCT+
Sbjct: 639 SRSLASRAIQRSLAIIRQAKQKKEKKREYCMYYNRFGRCNRGEC-CPYIHDPEKVAVCTR 697
Query: 1925 FLKGLCSNSD--CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKG 1982
F++G C +D C +H V E+MP CSYFL+G+C+N NCPY HV+V+ A C FLKG
Sbjct: 698 FVRGTCKKTDGSCPFSHHVSKEKMPVCSYFLKGICSNSNCPYSHVYVSRKAEVCSDFLKG 757
Query: 1983 YCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKS 2027
YC G +C+KKH+ +CP F G C G++C+L H + +G+++
Sbjct: 758 YCPLGAKCKKKHTLLCPDFARRGICPRGSQCQLLHRNQKRHGRRT 802
>gi|148699221|gb|EDL31168.1| mCG22112 [Mus musculus]
Length = 966
Score = 176 bits (447), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 111/165 (67%), Gaps = 6/165 (3%)
Query: 1868 ARVLASEKVRWSL---HTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTK 1924
+R LAS ++ SL A+ + +KR+YC ++ RFG+CN+ CPYIHDP K+AVCT+
Sbjct: 655 SRSLASRAIQRSLAIIRQAKQKKEKKREYCMYYNRFGRCNRGEC-CPYIHDPEKVAVCTR 713
Query: 1925 FLKGLCSNSD--CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKG 1982
F++G C +D C +H V E+MP CSYFL+G+C+N NCPY HV+V+ A C FLKG
Sbjct: 714 FVRGTCKKTDGSCPFSHHVSKEKMPVCSYFLKGICSNSNCPYSHVYVSRKAEVCSDFLKG 773
Query: 1983 YCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKS 2027
YC G +C+KKH+ +CP F G C G++C+L H + +G+++
Sbjct: 774 YCPLGAKCKKKHTLLCPDFARRGICPRGSQCQLLHRNQKRHGRRT 818
>gi|198442899|ref|NP_001128337.1| zinc finger CCCH domain-containing protein 3 [Rattus norvegicus]
Length = 952
Score = 176 bits (447), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 110/165 (66%), Gaps = 6/165 (3%)
Query: 1868 ARVLASEKVRWSL---HTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTK 1924
+R LAS ++ SL A+ + +KR+YC ++ RFG+CN+ CPYIHDP K+AVCT+
Sbjct: 640 SRSLASRAIQRSLAIIRQAKQKKEKKREYCMYYNRFGRCNRGEC-CPYIHDPEKVAVCTR 698
Query: 1925 FLKGLCSNSD--CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKG 1982
F++G C +D C +H V E+MP CSYFL+G+C+N NCPY HV+V+ A C FLKG
Sbjct: 699 FVRGTCKKTDGSCPFSHHVSKEKMPVCSYFLKGICSNSNCPYSHVYVSRKAEVCGDFLKG 758
Query: 1983 YCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKS 2027
YC G +C+KKH+ +CP F G C G +C+L H + +G+++
Sbjct: 759 YCPLGAKCKKKHTLLCPDFARRGVCPRGTQCQLLHRNQKRHGRRT 803
>gi|395512797|ref|XP_003760620.1| PREDICTED: zinc finger CCCH domain-containing protein 3 [Sarcophilus
harrisii]
Length = 385
Score = 176 bits (446), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/173 (49%), Positives = 112/173 (64%), Gaps = 11/173 (6%)
Query: 1868 ARVLASEKVRWSL---HTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTK 1924
+R +AS ++ SL AR + +KR YC ++ RFGKCN+ CPYIHDP K+AVCT+
Sbjct: 104 SRSIASRAIQRSLAIIRQARQKKEKKRDYCMYYNRFGKCNRGQ-HCPYIHDPEKVAVCTR 162
Query: 1925 FLKGLCSNSD--CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKG 1982
FL+G C +D C +H V E+MP CSYFL+G+C N NCPY HV+V+ A C FLKG
Sbjct: 163 FLRGTCKKTDGTCPFSHHVSKEKMPVCSYFLKGICNNSNCPYSHVYVSKKAEVCVDFLKG 222
Query: 1983 YCADGDECRKKHSYVCPTFKATGSCALGAKCR-LHHPKSRSNGKKSRRSRKPK 2034
YC G++C+KKH +CP F GSC G +C+ LH P+ R N RRS P+
Sbjct: 223 YCPMGEKCKKKHMLLCPDFSRKGSCPRGLQCQLLHRPRKRHN----RRSAPPQ 271
>gi|21707915|gb|AAH34435.1| ZC3H3 protein [Homo sapiens]
Length = 335
Score = 176 bits (446), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 124/201 (61%), Gaps = 6/201 (2%)
Query: 1868 ARVLASEKVRWSL---HTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTK 1924
+R LAS V+ SL AR R ++++YC ++ RFG+CN+ +CPYIHDP K+AVCT+
Sbjct: 31 SRSLASRAVQRSLAIIRQARQRREKRKEYCMYYNRFGRCNRGE-RCPYIHDPEKVAVCTR 89
Query: 1925 FLKGLCSNSD--CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKG 1982
F++G C +D C +H V E+MP CSYFL+G+C+N NCPY HV+V+ A C FLKG
Sbjct: 90 FVRGTCKKTDGTCPFSHHVSKEKMPVCSYFLKGICSNSNCPYSHVYVSRKAEVCSDFLKG 149
Query: 1983 YCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSRKPKNTHGRYFG 2042
YC G +C+KKH+ +CP F G+C GA+C+L H + + +++ S P +
Sbjct: 150 YCPLGAKCKKKHTLLCPDFARRGACPRGAQCQLLHRTQKRHSRRAATSPAPGPSDATARS 209
Query: 2043 SMLVEDSESQTAMSERPTVQN 2063
+ + + S+RPT Q
Sbjct: 210 RVSASHGPRKPSASQRPTRQT 230
>gi|417413187|gb|JAA52939.1| Putative zinc finger ccch domain-containing protein 3, partial
[Desmodus rotundus]
Length = 940
Score = 175 bits (443), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 71/145 (48%), Positives = 101/145 (69%), Gaps = 3/145 (2%)
Query: 1891 RKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSD--CKLTHKVIPERMPD 1948
++YC ++ RFG+CN+ CPYIHDP K+AVCT+F++G C +D C +H+V E+MP
Sbjct: 649 QEYCMYYNRFGRCNRGE-HCPYIHDPEKVAVCTRFVRGTCKKTDGTCPFSHQVSKEKMPV 707
Query: 1949 CSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCA 2008
CSYFL+G+C+N NCPY HV+V+ A C GFLKGYC G +C+KKH+ +CP F G+C
Sbjct: 708 CSYFLKGICSNSNCPYSHVYVSRKAEVCTGFLKGYCPLGAKCKKKHTLLCPDFSRGGTCP 767
Query: 2009 LGAKCRLHHPKSRSNGKKSRRSRKP 2033
GA+C+L H + G+++ S P
Sbjct: 768 RGAQCQLLHRTQKRLGRRAAASPAP 792
>gi|432855626|ref|XP_004068278.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like [Oryzias
latipes]
Length = 862
Score = 174 bits (442), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 79/155 (50%), Positives = 108/155 (69%), Gaps = 9/155 (5%)
Query: 1869 RVLASEKVRWSLHTARLRLARKRK----YCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTK 1924
R LAS V+ S+ A +R AR++K YC ++ RFGKCN+ C +IHDP K+AVCT+
Sbjct: 617 RHLASRAVQRSI--AIIRQARQKKQQKQYCMYYNRFGKCNRGTS-CTFIHDPDKVAVCTR 673
Query: 1925 FLKGLCSNSD--CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKG 1982
FL+G C D C +HKV E+MP CSYFL+G+C N +CPY HV+V+ A CE F+KG
Sbjct: 674 FLRGTCKREDGTCPFSHKVSKEKMPVCSYFLKGICNNSDCPYSHVYVSSKAEVCEDFVKG 733
Query: 1983 YCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
YC +G++C+KKH+ VC F TGSC+ G++C+L H
Sbjct: 734 YCPEGEKCKKKHTLVCSDFFKTGSCSRGSRCKLQH 768
>gi|112419061|gb|AAI21895.1| zinc finger CCCH-type containing 3 [Xenopus (Silurana) tropicalis]
Length = 827
Score = 174 bits (442), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/250 (38%), Positives = 145/250 (58%), Gaps = 20/250 (8%)
Query: 1868 ARVLASEKVRWSLHTARLRLAR----KRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCT 1923
+R +AS V+ SL A +R A+ K++YC ++ RFGKCN+ CP+IHDP K+AVCT
Sbjct: 586 SRYIASRAVQRSL--AIIRQAKHKKEKKEYCMYYNRFGKCNRGQN-CPFIHDPEKVAVCT 642
Query: 1924 KFLKGLCSNSD--CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLK 1981
+FL+G C +D C +HKV ++MP CSYFL+G+C N +CPY HV+V+ A C+ FLK
Sbjct: 643 RFLRGTCKKTDGTCPFSHKVSKDKMPVCSYFLKGICHNNDCPYSHVYVSRKAEICKDFLK 702
Query: 1982 GYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSR--KPKNTHGR 2039
GYC G +C+KKH+ CP + G C GAKC+L H + + + +S +P G+
Sbjct: 703 GYCPLGAKCKKKHTLQCPDYARDGKCPNGAKCKLQHRQRKKRPENVAQSEWPRPGGRQGQ 762
Query: 2040 YFGSMLVEDSESQTAMSERPTVQNNGNLFVEGKLVDYIGLDVSDKEAGETNDALHELLDF 2099
G+ + ++ TA E + G ++ L +I L+ S G+T+ +
Sbjct: 763 SAGASAIGSTD--TASDE-----DLGRSRMQ-TLPAFISLNCSLTPTGDTSQGPAKGTTT 814
Query: 2100 NDSGASELQL 2109
+DSG LQ+
Sbjct: 815 DDSG-KRLQI 823
>gi|350276194|ref|NP_001037949.3| zinc finger CCCH domain-containing protein 3 [Xenopus (Silurana)
tropicalis]
gi|62467681|gb|AAX84027.1| Smad-interacting and CPSF-like protein [Xenopus (Silurana)
tropicalis]
Length = 827
Score = 174 bits (442), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/250 (38%), Positives = 145/250 (58%), Gaps = 20/250 (8%)
Query: 1868 ARVLASEKVRWSLHTARLRLAR----KRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCT 1923
+R +AS V+ SL A +R A+ K++YC ++ RFGKCN+ CP+IHDP K+AVCT
Sbjct: 586 SRYIASRAVQRSL--AIIRQAKHKKEKKEYCMYYNRFGKCNRGQN-CPFIHDPEKVAVCT 642
Query: 1924 KFLKGLCSNSD--CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLK 1981
+FL+G C +D C +HKV ++MP CSYFL+G+C N +CPY HV+V+ A C+ FLK
Sbjct: 643 RFLRGTCKKTDGTCPFSHKVSKDKMPVCSYFLKGICHNNDCPYSHVYVSRKAEICKDFLK 702
Query: 1982 GYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSR--KPKNTHGR 2039
GYC G +C+KKH+ CP + G C GAKC+L H + + + +S +P G+
Sbjct: 703 GYCPLGAKCKKKHTLQCPDYARDGKCPNGAKCKLQHRQRKKRPENVAQSEWPRPGGRQGQ 762
Query: 2040 YFGSMLVEDSESQTAMSERPTVQNNGNLFVEGKLVDYIGLDVSDKEAGETNDALHELLDF 2099
G+ + ++ TA E + G ++ L +I L+ S G+T+ +
Sbjct: 763 SAGASAIGSTD--TASDE-----DLGRSRMQ-TLPAFISLNCSLTPTGDTSQGPAKGATT 814
Query: 2100 NDSGASELQL 2109
+DSG LQ+
Sbjct: 815 DDSG-KRLQI 823
>gi|148697541|gb|EDL29488.1| mCG141533 [Mus musculus]
Length = 662
Score = 174 bits (442), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 111/165 (67%), Gaps = 6/165 (3%)
Query: 1868 ARVLASEKVRWSL---HTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTK 1924
+R LAS ++ SL A+ + +KR+YC ++ RFG+CN+ CPYIHDP K+AVCT+
Sbjct: 351 SRSLASRAIQRSLAIIRQAKQKKEKKREYCMYYNRFGRCNRGEC-CPYIHDPEKVAVCTR 409
Query: 1925 FLKGLCSNSD--CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKG 1982
F++G C +D C +H V E+MP CSYFL+G+C+N NCPY HV+V+ A C FLKG
Sbjct: 410 FVRGTCKKTDGSCPFSHHVSKEKMPVCSYFLKGICSNSNCPYSHVYVSRKAEVCSDFLKG 469
Query: 1983 YCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKS 2027
YC G +C+KKH+ +CP F G C G++C+L H + +G+++
Sbjct: 470 YCPLGAKCKKKHTLLCPDFARRGICPRGSQCQLLHRNQKRHGRRT 514
>gi|29612684|gb|AAH49953.1| Zc3h3 protein, partial [Mus musculus]
Length = 573
Score = 173 bits (439), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 111/165 (67%), Gaps = 6/165 (3%)
Query: 1868 ARVLASEKVRWSL---HTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTK 1924
+R LAS ++ SL A+ + +KR+YC ++ RFG+CN+ CPYIHDP K+AVCT+
Sbjct: 262 SRSLASRAIQRSLAIIRQAKQKKEKKREYCMYYNRFGRCNRGEC-CPYIHDPEKVAVCTR 320
Query: 1925 FLKGLCSNSD--CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKG 1982
F++G C +D C +H V E+MP CSYFL+G+C+N NCPY HV+V+ A C FLKG
Sbjct: 321 FVRGTCKKTDGSCPFSHHVSKEKMPVCSYFLKGICSNSNCPYSHVYVSRKAEVCSDFLKG 380
Query: 1983 YCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKS 2027
YC G +C+KKH+ +CP F G C G++C+L H + +G+++
Sbjct: 381 YCPLGAKCKKKHTLLCPDFARRGICPRGSQCQLLHRNQKRHGRRT 425
>gi|395860130|ref|XP_003802368.1| PREDICTED: zinc finger CCCH domain-containing protein 3 [Otolemur
garnettii]
Length = 963
Score = 172 bits (435), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 72/143 (50%), Positives = 98/143 (68%), Gaps = 6/143 (4%)
Query: 1893 YCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSD--CKLTHKVIPERMPDCS 1950
YC ++ RFG+CN+ CPYIHDP K+AVCT+F++G C +D C +H V E+MP CS
Sbjct: 684 YCMYYNRFGRCNRGE-LCPYIHDPEKVAVCTRFVRGTCKKTDGTCPFSHHVSKEKMPVCS 742
Query: 1951 YFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALG 2010
YFL+G+C+N NCPY HV+V+ A C FLKGYC G +C+KKH+ +CP F G+C G
Sbjct: 743 YFLKGICSNSNCPYSHVYVSRKAEVCSDFLKGYCPLGMKCKKKHTLLCPDFARRGTCPRG 802
Query: 2011 AKCRLHHPKSRSNGKKSRRSRKP 2033
A+C+L H R+ + SRR+ P
Sbjct: 803 AQCQLLH---RNQKRNSRRAAVP 822
>gi|149066179|gb|EDM16052.1| zinc finger CCCH type domain containing 3 (predicted), isoform CRA_b
[Rattus norvegicus]
Length = 449
Score = 172 bits (435), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 110/165 (66%), Gaps = 6/165 (3%)
Query: 1868 ARVLASEKVRWSL---HTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTK 1924
+R LAS ++ SL A+ + +KR+YC ++ RFG+CN+ CPYIHDP K+AVCT+
Sbjct: 137 SRSLASRAIQRSLAIIRQAKQKKEKKREYCMYYNRFGRCNRGEC-CPYIHDPEKVAVCTR 195
Query: 1925 FLKGLCSNSD--CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKG 1982
F++G C +D C +H V E+MP CSYFL+G+C+N NCPY HV+V+ A C FLKG
Sbjct: 196 FVRGTCKKTDGSCPFSHHVSKEKMPVCSYFLKGICSNSNCPYSHVYVSRKAEVCGDFLKG 255
Query: 1983 YCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKS 2027
YC G +C+KKH+ +CP F G C G +C+L H + +G+++
Sbjct: 256 YCPLGAKCKKKHTLLCPDFARRGVCPRGTQCQLLHRNQKRHGRRT 300
>gi|431908098|gb|ELK11701.1| Zinc finger CCCH domain-containing protein 3 [Pteropus alecto]
Length = 966
Score = 171 bits (434), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 107/172 (62%), Gaps = 3/172 (1%)
Query: 1893 YCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSD--CKLTHKVIPERMPDCS 1950
YC ++ RFG+CN+ +CPYIHDP K+AVCT+F++G C +D C +H V E+MP CS
Sbjct: 684 YCMYYNRFGRCNRGE-RCPYIHDPEKVAVCTRFVRGTCKKTDGTCPFSHHVSKEKMPVCS 742
Query: 1951 YFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALG 2010
YFL+G+C+N NCPY HV+V+ A C FLKGYC G +C+KKH+ +CP F G C G
Sbjct: 743 YFLKGICSNSNCPYSHVYVSRKAEVCTDFLKGYCPLGAKCKKKHTLLCPDFSRRGVCPRG 802
Query: 2011 AKCRLHHPKSRSNGKKSRRSRKPKNTHGRYFGSMLVEDSESQTAMSERPTVQ 2062
A+C+L H + G+++ P+ + R +++ ++RP Q
Sbjct: 803 AQCQLLHRSQKRLGRRAAAPPTPEPSDARPRSKASAGHGPRKSSAAQRPPRQ 854
>gi|449281115|gb|EMC88278.1| Zinc finger CCCH domain-containing protein 3, partial [Columba livia]
Length = 348
Score = 171 bits (434), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 72/132 (54%), Positives = 96/132 (72%), Gaps = 3/132 (2%)
Query: 1892 KYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSD--CKLTHKVIPERMPDC 1949
+YC ++ RFGKCN+ CPYIHDP K+AVCT+FL+G C +D C +HKV ++MP C
Sbjct: 121 EYCMYYNRFGKCNRGES-CPYIHDPEKVAVCTRFLRGTCKKTDGTCSFSHKVSKDKMPVC 179
Query: 1950 SYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCAL 2009
SYFL+G+C N NCPY HV+V+ A C+ FLKGYC G++C+KKH+ VCP F GSC
Sbjct: 180 SYFLKGICNNSNCPYSHVYVSRKAEICQDFLKGYCPMGEKCKKKHTLVCPDFAKKGSCPR 239
Query: 2010 GAKCRLHHPKSR 2021
GA+C+L HP+ +
Sbjct: 240 GAQCKLLHPQKK 251
>gi|355729867|gb|AES10010.1| zinc finger CCCH-type containing 3 [Mustela putorius furo]
Length = 858
Score = 171 bits (433), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 134/245 (54%), Gaps = 43/245 (17%)
Query: 1795 RERIFR-IGSVRYKMDSSR--RTLQRISDDSSPCAAGPTLEKNAKKSYIPRRLVIGNDEY 1851
R R FR IG V YK+ +++ +T R DS GN
Sbjct: 567 RSRGFRCIGGVLYKVSANKLSKTCGRPGGDS------------------------GNRPL 602
Query: 1852 VRIGNGNQLIRDPKRR-ARVLASEKVRWSLHTARLRLARKR----KYCQFFTRFGKCNKD 1906
+R G G DP +R LAS V+ SL R R+R +YC ++ RFG+C+
Sbjct: 603 LRTGRG-----DPAGSCSRSLASRAVQRSLAIGRQARQRRRKQQPEYCMYYNRFGRCHHG 657
Query: 1907 NGKCPYIHDPSKIAVCTKFLKGLCSNSD--CKLTHKVIPERMPDCSYFLQGLCTNKNCPY 1964
+CPYIHDP K+AVCT+FL+G C +D C +H V E+MP CSYFL+G+C+N NCPY
Sbjct: 658 Q-RCPYIHDPDKVAVCTRFLRGTCKKTDGTCPFSHHVSKEKMPVCSYFLKGICSNSNCPY 716
Query: 1965 RHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNG 2024
HV+V+ A C FLKGYC G +C+KKH+ +CP F G C GA+C+L H RS
Sbjct: 717 SHVYVSRKAEVCTDFLKGYCPLGAKCKKKHTLLCPDFSRRGLCPRGAQCQLLH---RSQK 773
Query: 2025 KKSRR 2029
+ RR
Sbjct: 774 RLGRR 778
>gi|359072164|ref|XP_002692636.2| PREDICTED: zinc finger CCCH domain-containing protein 3 [Bos taurus]
Length = 947
Score = 170 bits (431), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 116/187 (62%), Gaps = 15/187 (8%)
Query: 1855 GNGNQLIR----DPKRR-ARVLASEKVRWSL-------HTARLRLARKRKYCQFFTRFGK 1902
G G L+R DP +R LAS V+ SL + R RK +YC ++ RFG+
Sbjct: 645 GGGRPLLRTGRLDPASSCSRSLASRAVQRSLAIVRQARQARQRRRRRKEEYCMYYNRFGR 704
Query: 1903 CNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSD--CKLTHKVIPERMPDCSYFLQGLCTNK 1960
CN+ +CPY+HDP K+AVCT+F++G C +D C +H V E+MP CSYFL+G+C+N
Sbjct: 705 CNRGE-RCPYVHDPEKVAVCTRFVRGTCKKTDGTCPFSHHVSKEKMPVCSYFLKGICSNS 763
Query: 1961 NCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKS 2020
+CPY HV+V+ A C FLKGYC G +C+KKH+ +CP F G C GA+C+L H
Sbjct: 764 SCPYSHVYVSRKAEVCTDFLKGYCPLGAKCKKKHTLLCPDFSRRGVCPRGAQCQLLHRNP 823
Query: 2021 RSNGKKS 2027
+ G+++
Sbjct: 824 KRLGRRA 830
>gi|358415261|ref|XP_593664.4| PREDICTED: zinc finger CCCH domain-containing protein 3, partial [Bos
taurus]
Length = 885
Score = 170 bits (431), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 111/177 (62%), Gaps = 15/177 (8%)
Query: 1855 GNGNQLIR----DPKRR-ARVLASEKVRWSL-------HTARLRLARKRKYCQFFTRFGK 1902
G G L+R DP +R LAS V+ SL + R RK +YC ++ RFG+
Sbjct: 645 GGGRPLLRTGRLDPASSCSRSLASRAVQRSLAIVRQARQARQRRRRRKEEYCMYYNRFGR 704
Query: 1903 CNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSD--CKLTHKVIPERMPDCSYFLQGLCTNK 1960
CN+ +CPY+HDP K+AVCT+F++G C +D C +H V E+MP CSYFL+G+C+N
Sbjct: 705 CNRGE-RCPYVHDPEKVAVCTRFVRGTCKKTDGTCPFSHHVSKEKMPVCSYFLKGICSNS 763
Query: 1961 NCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
+CPY HV+V+ A C FLKGYC G +C+KKH+ +CP F G C GA+C+L H
Sbjct: 764 SCPYSHVYVSRKAEVCTDFLKGYCPLGAKCKKKHTLLCPDFSRRGVCPRGAQCQLLH 820
>gi|296480814|tpg|DAA22929.1| TPA: hypothetical protein BOS_13733 [Bos taurus]
Length = 933
Score = 170 bits (431), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 116/187 (62%), Gaps = 15/187 (8%)
Query: 1855 GNGNQLIR----DPKRR-ARVLASEKVRWSL-------HTARLRLARKRKYCQFFTRFGK 1902
G G L+R DP +R LAS V+ SL + R RK +YC ++ RFG+
Sbjct: 631 GGGRPLLRTGRLDPASSCSRSLASRAVQRSLAIVRQARQARQRRRRRKEEYCMYYNRFGR 690
Query: 1903 CNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSD--CKLTHKVIPERMPDCSYFLQGLCTNK 1960
CN+ +CPY+HDP K+AVCT+F++G C +D C +H V E+MP CSYFL+G+C+N
Sbjct: 691 CNRGE-RCPYVHDPEKVAVCTRFVRGTCKKTDGTCPFSHHVSKEKMPVCSYFLKGICSNS 749
Query: 1961 NCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKS 2020
+CPY HV+V+ A C FLKGYC G +C+KKH+ +CP F G C GA+C+L H
Sbjct: 750 SCPYSHVYVSRKAEVCTDFLKGYCPLGAKCKKKHTLLCPDFSRRGVCPRGAQCQLLHRNP 809
Query: 2021 RSNGKKS 2027
+ G+++
Sbjct: 810 KRLGRRA 816
>gi|345779548|ref|XP_539198.3| PREDICTED: zinc finger CCCH domain-containing protein 3 [Canis lupus
familiaris]
Length = 1024
Score = 170 bits (430), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 69/138 (50%), Positives = 95/138 (68%), Gaps = 3/138 (2%)
Query: 1892 KYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSD--CKLTHKVIPERMPDC 1949
+YC ++ RFG+CN CPYIHDP K+AVCT+FL+G C +D C +H V E+MP C
Sbjct: 735 EYCMYYNRFGRCNHGE-HCPYIHDPDKVAVCTRFLRGTCKKTDGTCPFSHHVSKEKMPVC 793
Query: 1950 SYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCAL 2009
SYFL+G+C+N NCPY HV+V+ A C FLKGYC G +C+KKH+ +CP F G+C
Sbjct: 794 SYFLKGICSNSNCPYSHVYVSRKAEVCTDFLKGYCPLGAKCKKKHTLLCPDFSRRGTCPR 853
Query: 2010 GAKCRLHHPKSRSNGKKS 2027
GA+C+L H + G+++
Sbjct: 854 GAQCQLLHRNQKRLGRRA 871
>gi|444722737|gb|ELW63414.1| Zinc finger CCCH domain-containing protein 3 [Tupaia chinensis]
Length = 438
Score = 169 bits (427), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/257 (36%), Positives = 144/257 (56%), Gaps = 39/257 (15%)
Query: 1780 AESFASETKIRIRS-CRERIFR-IGSVRYKMDSSR--RTLQRISDDSSPCAAGPTLEKNA 1835
A +A+ T +R C + +R IG V YK+ +++ RT R SD SS
Sbjct: 65 ANPWAAATTGTVRGLCLSKSYRCIGGVLYKVSANKLSRTCSRPSDGSS------------ 112
Query: 1836 KKSYIPRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHT---ARLRLARKRK 1892
R + +G+ + R LAS V+ SL T A+ R RK++
Sbjct: 113 -------RPLFRTGRPDPVGSCS----------RFLASRAVQRSLATIRQAKQRRERKKE 155
Query: 1893 YCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSD--CKLTHKVIPERMPDCS 1950
YC ++ RFG+C++ +CPYIHDP K+AVCT+F++G C +D C +H+V E+MP CS
Sbjct: 156 YCTYYNRFGRCHRGQ-RCPYIHDPDKVAVCTRFVRGTCKKTDGTCPFSHQVSKEKMPVCS 214
Query: 1951 YFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALG 2010
YFL+G+C++ +CPY HV+V+ A C FL+GYC G +C+KKH+ +CP F G C G
Sbjct: 215 YFLKGVCSSSDCPYSHVYVSRKAEVCHDFLRGYCPLGAKCKKKHTLLCPDFARRGMCPRG 274
Query: 2011 AKCRLHHPKSRSNGKKS 2027
+C+L H + G+++
Sbjct: 275 TQCQLLHRNPKRQGRRA 291
>gi|456753122|gb|JAA74103.1| zinc finger CCCH-type containing 3, partial [Sus scrofa]
Length = 843
Score = 167 bits (422), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 76/181 (41%), Positives = 108/181 (59%), Gaps = 8/181 (4%)
Query: 1892 KYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSD--CKLTHKVIPERMPDC 1949
+YC ++ RFG+CN+ CPYIHDP K+AVCT+F++G C +D C +H V E+MP C
Sbjct: 662 EYCMYYNRFGRCNRGQ-HCPYIHDPEKVAVCTRFVRGTCKKTDGTCPFSHHVSKEKMPVC 720
Query: 1950 SYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCAL 2009
SYFL+G+C+N NCPY HV+V+ A C FLKGYC G +C+KKH+ +CP F G C
Sbjct: 721 SYFLKGICSNSNCPYSHVYVSRRAEVCTDFLKGYCPLGAKCKKKHTLLCPDFSRRGVCPR 780
Query: 2010 GAKCRLHHPKSRSNGKKSRRSRKPKNTHGRYFGSMLVEDSESQTAMSERPTVQNNGNLFV 2069
G +C+L H R+ + RR+ P R S +++ ++RP Q +
Sbjct: 781 GTQCQLLH---RNRKRLGRRAATPTAPEPRSRAS--TSHGPRKSSGAQRPARQTTSSPTA 835
Query: 2070 E 2070
E
Sbjct: 836 E 836
>gi|301773468|ref|XP_002922153.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
[Ailuropoda melanoleuca]
Length = 895
Score = 166 bits (421), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 71/140 (50%), Positives = 94/140 (67%), Gaps = 6/140 (4%)
Query: 1893 YCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSD--CKLTHKVIPERMPDCS 1950
YC ++ RFG+CN CPYIHDP K+AVCT+FL+G C +D C +H V E+MP CS
Sbjct: 669 YCMYYNRFGRCNHGQ-HCPYIHDPDKVAVCTRFLRGTCKKTDGTCPFSHHVSKEKMPVCS 727
Query: 1951 YFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALG 2010
YFL+G+C+N +CPY HV+V+ A C FLKGYC G +C+KKH+ +CP F G C G
Sbjct: 728 YFLKGICSNSSCPYSHVYVSRKAEVCTDFLKGYCPLGAKCKKKHTLLCPDFSRRGLCPRG 787
Query: 2011 AKCRLHHPKSRSNGKKSRRS 2030
A+C+L H RS + RR+
Sbjct: 788 AQCQLLH---RSQKRLGRRA 804
>gi|281341450|gb|EFB17034.1| hypothetical protein PANDA_011111 [Ailuropoda melanoleuca]
Length = 809
Score = 165 bits (418), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 71/140 (50%), Positives = 94/140 (67%), Gaps = 6/140 (4%)
Query: 1893 YCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSD--CKLTHKVIPERMPDCS 1950
YC ++ RFG+CN CPYIHDP K+AVCT+FL+G C +D C +H V E+MP CS
Sbjct: 654 YCMYYNRFGRCNHGQ-HCPYIHDPDKVAVCTRFLRGTCKKTDGTCPFSHHVSKEKMPVCS 712
Query: 1951 YFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALG 2010
YFL+G+C+N +CPY HV+V+ A C FLKGYC G +C+KKH+ +CP F G C G
Sbjct: 713 YFLKGICSNSSCPYSHVYVSRKAEVCTDFLKGYCPLGAKCKKKHTLLCPDFSRRGLCPRG 772
Query: 2011 AKCRLHHPKSRSNGKKSRRS 2030
A+C+L H RS + RR+
Sbjct: 773 AQCQLLH---RSQKRLGRRA 789
>gi|47208344|emb|CAF92904.1| unnamed protein product [Tetraodon nigroviridis]
Length = 198
Score = 164 bits (415), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 102/157 (64%), Gaps = 23/157 (14%)
Query: 1883 ARLRLARKRK----YCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSD--CK 1936
A +R AR++K YC ++ RFGKCN+ N CPYIHDP K+AVCT+FL+G C + C
Sbjct: 9 AIIRHARQKKQQKQYCMYYNRFGKCNRGN-TCPYIHDPDKVAVCTRFLRGTCKKAKGICP 67
Query: 1937 LTHKVI----------------PERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFL 1980
+HKV P +MP CSYFL+G+C N +CPY HV+V+ A CE F+
Sbjct: 68 FSHKVAKEKLRVKGERGNGVLSPLQMPVCSYFLKGICNNNDCPYSHVYVSHKAEVCEDFV 127
Query: 1981 KGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
KGYC +G++C+KKH+ VCP F GSC GA+C+LHH
Sbjct: 128 KGYCPEGEKCKKKHTLVCPDFSKMGSCPQGARCKLHH 164
>gi|426235999|ref|XP_004011962.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 3 [Ovis aries]
Length = 924
Score = 164 bits (415), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 64/130 (49%), Positives = 91/130 (70%), Gaps = 3/130 (2%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSD--CKLTHKVIPERMP 1947
K +YC ++ RFG+CN+ +CPY+HDP K+AVCT+F++G C +D C +H V E+MP
Sbjct: 688 KEEYCMYYNRFGRCNRGE-RCPYVHDPEKVAVCTRFVRGTCKKTDGTCPFSHHVSKEKMP 746
Query: 1948 DCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSC 2007
CSYFL+G+C+N +CPY HV+V+ A C L+GYC G +C+KKH+ +CP F G C
Sbjct: 747 VCSYFLKGICSNSSCPYSHVYVSRKAEVCTDCLRGYCPLGAKCKKKHTLLCPDFSRRGVC 806
Query: 2008 ALGAKCRLHH 2017
GA+C+L H
Sbjct: 807 PRGAQCQLLH 816
>gi|332263529|ref|XP_003280804.1| PREDICTED: zinc finger CCCH domain-containing protein 3 [Nomascus
leucogenys]
Length = 961
Score = 164 bits (414), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 80/204 (39%), Positives = 117/204 (57%), Gaps = 9/204 (4%)
Query: 1868 ARVLASEKVRWSL---HTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTK 1924
+R LAS V+ SL AR R ++++YC ++ RFG+CN+ +CPYIHDP K+AVCT+
Sbjct: 658 SRSLASRAVQRSLAIIRQARQRREKRKEYCMYYNRFGRCNRGE-RCPYIHDPEKVAVCTR 716
Query: 1925 ---FLKGLCSNSD--CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGF 1979
F++G C +D C +H V +RMP CSYFL+G+C+N NCPY HV+V+ A C F
Sbjct: 717 CLPFVRGTCKKTDETCPFSHHVSADRMPVCSYFLKGICSNSNCPYSHVYVSRKAEVCSDF 776
Query: 1980 LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSRKPKNTHGR 2039
LKGYC G +C + +CP A GSC G C+L H + + +++ S P +
Sbjct: 777 LKGYCPLGAKCEQGPDILCPMICARGSCPRGPPCQLLHRTQKCHSRRAATSPAPGPSDAA 836
Query: 2040 YFGSMLVEDSESQTAMSERPTVQN 2063
+ + ++RPT Q
Sbjct: 837 ARSRASASHGPRKPSAAQRPTRQT 860
>gi|241701703|ref|XP_002413185.1| ZC3H3 protein, putative [Ixodes scapularis]
gi|215506999|gb|EEC16493.1| ZC3H3 protein, putative [Ixodes scapularis]
Length = 291
Score = 164 bits (414), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 98/257 (38%), Positives = 130/257 (50%), Gaps = 27/257 (10%)
Query: 1796 ERIFRIGSVRYKMDSSRRTLQRISDDSSPCAAGPTLEKNAKKSYIPRRLVIGNDEYVRIG 1855
+RI I Y MD S + L+R S + G +L R+ IG +V
Sbjct: 43 QRILVIRGTTYHMDVSGKVLRRAPASSQ--SPGASLS----------RIDIGGKTFVERL 90
Query: 1856 NGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKR-----KYCQFFTRFGKCNKDNGKC 1910
G L + P R S + S+H R RK +YC FF RFG+CNK C
Sbjct: 91 PG-VLSQTPSSETRTYLSRTINRSIHRMRTVNTRKLERRSDRYCMFFNRFGRCNK-GASC 148
Query: 1911 PYIHDPSKIAVCTK-------FLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCP 1963
YIHDP KIAVCT+ FL+G C SDC +HKV PE+MP CS+FL+G CT+ CP
Sbjct: 149 TYIHDPEKIAVCTRQVIFFLEFLRGTCKLSDCPFSHKVAPEKMPVCSFFLKGRCTSNPCP 208
Query: 1964 YRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRS 2022
YRHV VN A C F ++G+C +G +C+++H VCP + A C G +C L H +
Sbjct: 209 YRHVKVNAKAEVCRDFAVRGFCTEGIKCKRQHVLVCPEYAANKKCPRGNRCFLAHRDQAA 268
Query: 2023 NGKKSRRSRKPKNTHGR 2039
K +S P + R
Sbjct: 269 KRKHCEKSASPVDLEQR 285
>gi|115689577|ref|XP_785788.2| PREDICTED: uncharacterized protein LOC580648 [Strongylocentrotus
purpuratus]
Length = 1142
Score = 162 bits (411), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 68/143 (47%), Positives = 94/143 (65%), Gaps = 5/143 (3%)
Query: 1893 YCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSD--CKLTHKVIPERMPDCS 1950
YC+F+ R+G+C++ + KCPYIHDP K+AVCT+FL+G C +D C +HK ++MP C
Sbjct: 862 YCKFYNRYGRCHRGD-KCPYIHDPEKVAVCTQFLRGTCKKTDGSCPFSHKASKDKMPVCV 920
Query: 1951 YFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALG 2010
YFL+G+C +CPY HV V+ A C+ FL GYC G +C+ KH+ C F TG C LG
Sbjct: 921 YFLKGVCNRDDCPYSHVKVSKKAEVCQEFLHGYCPRGAKCKNKHTLDCAEFNETGQCKLG 980
Query: 2011 AKCRLHH--PKSRSNGKKSRRSR 2031
KC L H K++S G+K + R
Sbjct: 981 NKCPLWHRKRKTKSEGRKGVKRR 1003
>gi|340372239|ref|XP_003384652.1| PREDICTED: hypothetical protein LOC100641586 [Amphimedon
queenslandica]
Length = 619
Score = 159 bits (403), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 90/129 (69%), Gaps = 4/129 (3%)
Query: 1892 KYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSD--CKLTHKVIPERMPDC 1949
+YC ++ RFG+CN+ + +C YIHDP +IA+C+KFL+G C N D C +H + E+MP C
Sbjct: 402 QYCLYYNRFGRCNRGD-QCQYIHDPKRIAICSKFLRGKCENIDGSCPFSHNISKEKMPVC 460
Query: 1950 SYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCAL 2009
S+FL+G+CT NCPY HV V PNA C F+KGYC G++C+K+H+ CP + TG+C
Sbjct: 461 SFFLRGVCTRDNCPYLHVSVGPNAELCMDFIKGYCPLGEDCKKQHTLTCPDYSRTGTCPR 520
Query: 2010 GAK-CRLHH 2017
G + C L H
Sbjct: 521 GKRHCPLKH 529
>gi|156363383|ref|XP_001626024.1| predicted protein [Nematostella vectensis]
gi|156212884|gb|EDO33924.1| predicted protein [Nematostella vectensis]
Length = 152
Score = 159 bits (401), Expect = 2e-35, Method: Composition-based stats.
Identities = 74/149 (49%), Positives = 95/149 (63%), Gaps = 20/149 (13%)
Query: 1888 ARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSD--CKLTHKV---- 1941
AR +YC +++RFGKCNK + KC YIHDPSK+AVCTKFLKG C N+D C +H++
Sbjct: 5 ARAEQYCMYYSRFGKCNKGD-KCKYIHDPSKVAVCTKFLKGKCKNTDGTCTFSHRIDKEK 63
Query: 1942 -------------IPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGD 1988
IPE MP C +FL+G C N +CPY HV+V+ A+ CE F+KGYC G
Sbjct: 64 VYNYIPGKNKKGSIPENMPVCQFFLKGTCFNDDCPYSHVNVSNKAAICEDFVKGYCPLGQ 123
Query: 1989 ECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
+C+KKHS C F TG C+ G KC+ H
Sbjct: 124 QCKKKHSLECEEFTFTGKCSKGHKCKQMH 152
>gi|195996743|ref|XP_002108240.1| hypothetical protein TRIADDRAFT_52522 [Trichoplax adhaerens]
gi|190589016|gb|EDV29038.1| hypothetical protein TRIADDRAFT_52522 [Trichoplax adhaerens]
Length = 602
Score = 156 bits (395), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 87/128 (67%), Gaps = 1/128 (0%)
Query: 1899 RFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLCT 1958
R GKCN+ N +CPY+HDPSK+AVCT+FL+G+C DC +H++ ++MP CS+FL+G CT
Sbjct: 382 RKGKCNRGN-ECPYVHDPSKVAVCTRFLRGMCHAEDCPFSHQISTDKMPVCSFFLRGNCT 440
Query: 1959 NKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHP 2018
NCP+ HV V NA C+ FL GYC DG +C+ +H +CP + G C+ G CRL H
Sbjct: 441 KDNCPFSHVRVAKNADLCKSFLLGYCPDGVKCKMRHVIICPEYSRNGQCSKGQNCRLLHR 500
Query: 2019 KSRSNGKK 2026
+ R KK
Sbjct: 501 RIRFLRKK 508
>gi|449680209|ref|XP_002153918.2| PREDICTED: uncharacterized protein LOC100206476 [Hydra
magnipapillata]
Length = 492
Score = 156 bits (395), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 97/147 (65%), Gaps = 1/147 (0%)
Query: 1871 LASEKVRWSLHTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLC 1930
LAS ++ +++ + + +R YC F++RFGKC + C YIHDP K+AVCT+FL+G C
Sbjct: 130 LASCVLKKTINRVQCQKKGQRNYCLFYSRFGKCKRGEN-CHYIHDPEKVAVCTRFLRGTC 188
Query: 1931 SNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDEC 1990
+ +C +HK P +MP CSYFL G CT CPYRHV+V+ +A CE F+KG+C +G++C
Sbjct: 189 KDKNCIFSHKFDPNKMPVCSYFLLGQCTRDKCPYRHVNVSSSAPICEAFVKGFCPNGEKC 248
Query: 1991 RKKHSYVCPTFKATGSCALGAKCRLHH 2017
KKH+ C F +G C+ CRL H
Sbjct: 249 TKKHTLECEEFLRSGICSKRKSCRLVH 275
>gi|198425225|ref|XP_002128560.1| PREDICTED: similar to zinc finger CCCH-type containing 3 [Ciona
intestinalis]
Length = 565
Score = 152 bits (384), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/150 (47%), Positives = 95/150 (63%), Gaps = 4/150 (2%)
Query: 1871 LASEKVRWSLHTARLRLARK--RKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKG 1928
LAS+ + S+ TAR R K RK+C ++ RFG+CN+ KCPY HDP ++A+CTKFL+G
Sbjct: 348 LASQALHRSIQTARCRGRNKVLRKFCIYYNRFGRCNRGT-KCPYTHDPDRVALCTKFLRG 406
Query: 1929 LCSNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLK-GYCADG 1987
C +C +HK+ E+MP CS+FL+G C K+CPY HV V A+ C+ F GYCA
Sbjct: 407 TCRIENCPFSHKLSKEKMPVCSFFLRGKCATKDCPYLHVFVGHTAALCKSFATDGYCAKA 466
Query: 1988 DECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
D C++KH C F TG C KC+L H
Sbjct: 467 DSCKEKHIRACYEFYETGICKNQDKCKLPH 496
>gi|328777722|ref|XP_001122982.2| PREDICTED: hypothetical protein LOC727272 [Apis mellifera]
Length = 580
Score = 150 bits (379), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 121/219 (55%), Gaps = 12/219 (5%)
Query: 1841 PRRLVIGNDEYVRIG------NGNQLIRDPKRRARVLASEKVRW-SLHTARLRLARKRKY 1893
P+++V E + IG + N L+R+ V ++ KV+ S+ R ++ + +
Sbjct: 279 PKKIVNNKMELITIGGIVYKSSKNHLVRN---SYGVKSNNKVKQKSIQILRNKMQKNNQP 335
Query: 1894 CQFFTRFGKC-NKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYF 1952
C F +FG C N + G C HD +I +C KFL+G C C L+H + PE+MP C YF
Sbjct: 336 CLIFQKFGYCSNHEKGICVKRHDKKQIFLCKKFLQGNCLLDKCPLSHDIGPEKMPTCKYF 395
Query: 1953 LQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALGAK 2012
L+G CT CPYRH+ V+ + C FL+GYC G EC+++H +CP F+ T C+ G
Sbjct: 396 LEGCCTRDACPYRHIKVSSSTPICIDFLQGYCVKGSECKQRHENLCPEFEKTKKCSKGKH 455
Query: 2013 CRLHHPKSRSNGKKSRRSRKPKNTHGRYFGSMLVEDSES 2051
C H KS+S+ KK + ++ N H + +++D+ S
Sbjct: 456 CPYPH-KSQSSSKKQNQLKRKYNIHNNQATAPIIKDTSS 493
>gi|332025118|gb|EGI65298.1| Zinc finger CCCH domain-containing protein 3 [Acromyrmex echinatior]
Length = 651
Score = 150 bits (378), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 104/180 (57%), Gaps = 2/180 (1%)
Query: 1879 SLHTARLRLARKRKYCQFFTRFGKC-NKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKL 1937
S+ R ++ + + C + RFG C N +NG CP HD +++++C FL+G C + C L
Sbjct: 400 SIRILRNKMHKNNQPCLIYQRFGSCPNYENGTCPKRHDKNQVSLCKNFLQGKCFLNKCSL 459
Query: 1938 THKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYV 1997
+H V PE+MP C YFL G CT CPY HV V+ N S C FL+GYCA G++C+++H Y+
Sbjct: 460 SHDVGPEKMPTCKYFLDGCCTRDACPYLHVKVSSNTSICIDFLQGYCAKGNKCQRRHEYL 519
Query: 1998 CPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSRKPKNTHGRYFGSMLVEDSESQTAMSE 2057
CP F +G+C+ G C H N +K+ + + +Y + L D S+ + SE
Sbjct: 520 CPEFNKSGNCSKGECCPYPHKSHSFNSEKNTKYLNKTHDTQKYHAT-LATDGNSENSNSE 578
>gi|260784907|ref|XP_002587505.1| hypothetical protein BRAFLDRAFT_237032 [Branchiostoma floridae]
gi|229272653|gb|EEN43516.1| hypothetical protein BRAFLDRAFT_237032 [Branchiostoma floridae]
Length = 183
Score = 149 bits (377), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/171 (43%), Positives = 100/171 (58%), Gaps = 23/171 (13%)
Query: 1860 LIRDPKRRAR--VLASEKVRWSLHTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPS 1917
L+ P R + +L S+ R+ R A R+YC F+ RFG+CN+ N CPYIHDP
Sbjct: 5 LVCPPSRAVQRSILTSQTARYRKTN---RQAAARQYCMFYNRFGRCNRGN-DCPYIHDPD 60
Query: 1918 KIAVCTKFLKGLCSNSDCKLTHKVIPER-----------------MPDCSYFLQGLCTNK 1960
K+AVCT+FL+G C +DC +HKV P++ MP CSYFL+G+C
Sbjct: 61 KVAVCTRFLRGTCPVNDCPFSHKVSPDKVRIASHNAGGYVLCRVMMPVCSYFLRGVCNRD 120
Query: 1961 NCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALGA 2011
+CPY HV+V+ NA C+ F+ GYC G +C KKH+ CP F TGSC G
Sbjct: 121 DCPYSHVYVSRNAQVCQDFVHGYCPRGKQCTKKHTLDCPDFSRTGSCPRGG 171
>gi|157133950|ref|XP_001663088.1| hypothetical protein AaeL_AAEL003065 [Aedes aegypti]
gi|108881457|gb|EAT45682.1| AAEL003065-PA [Aedes aegypti]
Length = 617
Score = 147 bits (372), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 119/233 (51%), Gaps = 16/233 (6%)
Query: 1795 RERIFRIGSVRYKMDSSRRTLQRISDDSSPCAAGPTLEKNAKKSYIPRRLVIGNDEYVRI 1854
R+R I R+ +D S L++I P+ E + + + RR+ IG Y++
Sbjct: 275 RQRFLSIRGTRFMLDQSGTKLRKI----------PSAEFDQPHAKL-RRIDIGGLTYMQ- 322
Query: 1855 GNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRFGKCNK-DNGKCPYI 1913
+ +R R R S + S+ + + C + R GKC GKCP +
Sbjct: 323 KTDDTFVRTETHRTRSYLSSTKQKSIQMLTSNMRKCNVPCPIYRRLGKCTAFARGKCPKL 382
Query: 1914 HDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNA 1973
HD ++I +C+KFLKG CSNSDC L+H V E+MP C +FL+G CT +CPY H V+
Sbjct: 383 HDKNQIMICSKFLKGECSNSDCLLSHNVSLEKMPVCHFFLEGRCTKNDCPYLHKKVSERE 442
Query: 1974 STCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKK 2026
CE FLKGYC D+C K+H ++CP G+C + +P SR KK
Sbjct: 443 RICEDFLKGYCPLADKCIKRHEFICPEMVRLGAC---DRTNCPYPHSRRKDKK 492
>gi|297606235|ref|NP_001058149.2| Os06g0638000 [Oryza sativa Japonica Group]
gi|255677257|dbj|BAF20063.2| Os06g0638000, partial [Oryza sativa Japonica Group]
Length = 202
Score = 147 bits (371), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 82/176 (46%), Positives = 102/176 (57%), Gaps = 11/176 (6%)
Query: 1955 GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDE-CRKKHSYVCPTFKATGSCALGAKC 2013
GLCTN CPYRHV VN NA CE FLKGYCA GDE C KKHSYVCP F+ATG C G++C
Sbjct: 29 GLCTNIACPYRHVKVNLNAPVCEDFLKGYCAYGDEQCHKKHSYVCPVFEATGECPQGSRC 88
Query: 2014 RLHHPKSRSNGKKSRRSRKPKNTHGRYFGSMLVEDSESQTAMSERPTVQNNGNLFVEGKL 2073
+LHHPKS+ K R ++ GRYF + + E++ + + +F +G L
Sbjct: 89 KLHHPKSKVKSKSRRPDFLQNSSWGRYFDASIDHQDETRKVSLDEDEREKPQRVFTDGDL 148
Query: 2074 VDYIGLDVSDKEAGETNDA-----LHELLDFNDSGASELQLDDLDELIKPIRIMNS 2124
+I LD E DA L EL DSG +Q D+LD LIKP+RIM +
Sbjct: 149 -GFISLDDDADEDVTALDASDDIPLMEL----DSGDLSVQTDNLDALIKPLRIMRT 199
>gi|345495262|ref|XP_003427471.1| PREDICTED: hypothetical protein LOC100678538 [Nasonia vitripennis]
Length = 736
Score = 147 bits (370), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 92/161 (57%), Gaps = 2/161 (1%)
Query: 1872 ASEKVRW-SLHTARLRLARKRKYCQFFTRFGKCNKD-NGKCPYIHDPSKIAVCTKFLKGL 1929
AS KV+ SL R ++ + + C F ++G CN G CP +HD ++AVC FL+G
Sbjct: 463 ASNKVKQRSLQILRNKMRKNNQPCLLFQKYGYCNSQLKGTCPKVHDKKQVAVCKNFLQGK 522
Query: 1930 CSNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDE 1989
C ++C L+H V PE+MP C +FLQG CT + CPY HV V C FL+GYC G+E
Sbjct: 523 CLLNNCLLSHDVGPEKMPTCKFFLQGCCTREGCPYLHVKVPSKNPICVEFLRGYCPQGNE 582
Query: 1990 CRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRS 2030
C +H CP F TG+C+ G C H + KK R+S
Sbjct: 583 CMNRHINACPEFDKTGACSKGKSCPYPHEPHLTKTKKRRKS 623
>gi|242023010|ref|XP_002431929.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212517280|gb|EEB19191.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 727
Score = 146 bits (368), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 106/184 (57%), Gaps = 4/184 (2%)
Query: 1836 KKSYIPRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKY-C 1894
KKS +R+ IG Y++ + N LI+ RAR + + S+ T +L +K C
Sbjct: 450 KKSINFKRVDIGGVTYLQ-KSKNVLIKTNIHRARHIVNYAKNKSIATL-CQLKKKSALPC 507
Query: 1895 QFFTRFGKCNKDNGK-CPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFL 1953
+ +FGKCN+ N K C Y HDP IA+C KFLKG C+N +C L+H+V+ E+M C +FL
Sbjct: 508 AIYCKFGKCNRHNQKLCIYKHDPKNIAICRKFLKGNCTNKNCLLSHEVVQEKMATCLFFL 567
Query: 1954 QGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALGAKC 2013
G C CP+ HV +N NA C+ FL G+C G C K+H ++CP + G C G+KC
Sbjct: 568 NGNCNRDKCPFLHVKLNSNADICDKFLHGFCDLGQSCTKRHLFLCPKYDKYGKCDSGSKC 627
Query: 2014 RLHH 2017
H
Sbjct: 628 PYPH 631
>gi|307174929|gb|EFN65169.1| Zinc finger CCCH domain-containing protein 3 [Camponotus floridanus]
Length = 666
Score = 145 bits (366), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 90/150 (60%), Gaps = 1/150 (0%)
Query: 1879 SLHTARLRLARKRKYCQFFTRFGKC-NKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKL 1937
S+ R ++ + + C F RFG C N +NGKC HD ++++C FL+G C C L
Sbjct: 419 SIRILRNKMHKNNQPCLIFQRFGSCPNHENGKCLKRHDKKQVSLCKNFLQGKCFLDKCSL 478
Query: 1938 THKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYV 1997
+H V PE+MP C YFL G CT +CPY HV V+ N S C FL+GYC G +C+++H Y+
Sbjct: 479 SHDVGPEKMPTCKYFLDGCCTRDDCPYLHVKVSSNTSICIDFLQGYCVKGTKCQRRHEYL 538
Query: 1998 CPTFKATGSCALGAKCRLHHPKSRSNGKKS 2027
CP F +G+C+ G C H S+ +KS
Sbjct: 539 CPEFNKSGNCSKGECCPYPHKSHFSDSEKS 568
>gi|430811361|emb|CCJ31194.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 412
Score = 145 bits (365), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/246 (37%), Positives = 126/246 (51%), Gaps = 41/246 (16%)
Query: 1842 RRLVIGNDEYVRIGNGNQLIR----DP--KRRARVLASEKVRW----------SLHTARL 1885
+ LVI ++ NGN+LIR DP K + S V W SL +++
Sbjct: 146 KELVINGVKFYMKKNGNKLIRAKDNDPSLKTLKKAFVSGSVFWRSKNGNLWSASLVKSKI 205
Query: 1886 R-----LARKRKYCQFFTRFGKCNKDNGK-CPYIHDPSKIAVCTKFLKGLCSNSD-CKLT 1938
R + + K+CQ++TR GKC + GK CPY HDP+ +A+C F+KG C N + C L+
Sbjct: 206 RKNKLPVKKIEKHCQYYTRLGKCVQ--GKSCPYKHDPNHVAICPLFMKGKCQNKNSCDLS 263
Query: 1939 HKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYV 1997
H+ P R+ C +FL+G C+N NC Y HV VNP+A C F + GYC G ECR+KH
Sbjct: 264 HEPTPHRVSACLHFLRGRCSNTNCLYAHVRVNPSAPVCRAFAIDGYCEKGIECREKHLRE 323
Query: 1998 CPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSRKPKNTHGRYFGSMLVEDSESQTAMSE 2057
CP F G+C L CRL H + R +RK K S++V D ES
Sbjct: 324 CPDFSEKGTC-LIKNCRLPHIE--------RAARKRKEC------SLVVSDDESPICFES 368
Query: 2058 RPTVQN 2063
+ N
Sbjct: 369 HGLISN 374
>gi|383852894|ref|XP_003701960.1| PREDICTED: uncharacterized protein LOC100882111 isoform 1 [Megachile
rotundata]
Length = 588
Score = 144 bits (363), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 109/199 (54%), Gaps = 14/199 (7%)
Query: 1830 TLEKNAKKSY--IPRRLVIGND-EYVRIG------NGNQLIRDPKRRARVLASEKVRW-S 1879
T+ K K Y I R+ + N + V IG + NQL+R+ V ++ KV+ S
Sbjct: 271 TIPKANNKEYVGINRKKAVNNKMQLVTIGGIVYKSSKNQLVRN---SYGVKSNNKVKQKS 327
Query: 1880 LHTARLRLARKRKYCQFFTRFGKC-NKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLT 1938
+ R ++ + + C F RFG C N G C HD +I++C KFL+G C C L+
Sbjct: 328 IQILRNKMQKNNQPCLIFQRFGYCSNHTKGTCIKRHDKKQISLCKKFLQGNCLLDKCPLS 387
Query: 1939 HKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVC 1998
H V PE+MP C YFL+G CT CPYRHV V+ N C FL+GYCA G +C+++H +C
Sbjct: 388 HDVGPEKMPTCKYFLEGCCTRDACPYRHVKVSSNTPICIEFLQGYCAKGSDCKQRHENLC 447
Query: 1999 PTFKATGSCALGAKCRLHH 2017
P F+ T C+ G C H
Sbjct: 448 PEFEKTNKCSKGKHCPYPH 466
>gi|426360955|ref|XP_004047693.1| PREDICTED: zinc finger CCCH domain-containing protein 3 [Gorilla
gorilla gorilla]
Length = 939
Score = 144 bits (363), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 63/125 (50%), Positives = 86/125 (68%), Gaps = 6/125 (4%)
Query: 1868 ARVLASEKVRWSL---HTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTK 1924
+R LAS V+ SL AR R ++++YC ++ RFG+CN+ +CPYIHDP K+AVCT+
Sbjct: 766 SRSLASRAVQRSLAIIRQARQRREKRKEYCMYYNRFGRCNRGE-RCPYIHDPEKVAVCTR 824
Query: 1925 FLKGLCSNSD--CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKG 1982
F++G C +D C +H V E+MP CSYFL+G+C+N NCPY HV+V+ A C FLKG
Sbjct: 825 FVRGTCKKTDGTCPFSHHVSKEKMPVCSYFLKGICSNSNCPYSHVYVSRKAEVCSDFLKG 884
Query: 1983 YCADG 1987
YC G
Sbjct: 885 YCPLG 889
>gi|383852896|ref|XP_003701961.1| PREDICTED: uncharacterized protein LOC100882111 isoform 2 [Megachile
rotundata]
Length = 600
Score = 144 bits (362), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 109/199 (54%), Gaps = 14/199 (7%)
Query: 1830 TLEKNAKKSY--IPRRLVIGND-EYVRIG------NGNQLIRDPKRRARVLASEKVRW-S 1879
T+ K K Y I R+ + N + V IG + NQL+R+ V ++ KV+ S
Sbjct: 283 TIPKANNKEYVGINRKKAVNNKMQLVTIGGIVYKSSKNQLVRNS---YGVKSNNKVKQKS 339
Query: 1880 LHTARLRLARKRKYCQFFTRFGKC-NKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLT 1938
+ R ++ + + C F RFG C N G C HD +I++C KFL+G C C L+
Sbjct: 340 IQILRNKMQKNNQPCLIFQRFGYCSNHTKGTCIKRHDKKQISLCKKFLQGNCLLDKCPLS 399
Query: 1939 HKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVC 1998
H V PE+MP C YFL+G CT CPYRHV V+ N C FL+GYCA G +C+++H +C
Sbjct: 400 HDVGPEKMPTCKYFLEGCCTRDACPYRHVKVSSNTPICIEFLQGYCAKGSDCKQRHENLC 459
Query: 1999 PTFKATGSCALGAKCRLHH 2017
P F+ T C+ G C H
Sbjct: 460 PEFEKTNKCSKGKHCPYPH 478
>gi|357142405|ref|XP_003572561.1| PREDICTED: zinc finger CCCH domain-containing protein 7-like, partial
[Brachypodium distachyon]
Length = 131
Score = 141 bits (356), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/100 (65%), Positives = 75/100 (75%), Gaps = 1/100 (1%)
Query: 1930 CSNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDE 1989
CS++ CKLTHKV+ E M DCSYFL+GLCTN CPYRHV N +A CE FLKGYCA GDE
Sbjct: 1 CSDASCKLTHKVLLESMQDCSYFLRGLCTNMACPYRHVKTNSSAPVCEDFLKGYCAVGDE 60
Query: 1990 -CRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSR 2028
C KKHSYVCP+F+ATG C + C+LHHPK + K SR
Sbjct: 61 ICHKKHSYVCPSFEATGECPQKSICKLHHPKKKVASKTSR 100
>gi|340724262|ref|XP_003400502.1| PREDICTED: hypothetical protein LOC100642703 [Bombus terrestris]
Length = 586
Score = 140 bits (353), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 109/196 (55%), Gaps = 6/196 (3%)
Query: 1858 NQLIRDPKRRARVLASEKVRW-SLHTARLRLARKRKYCQFFTRFGKC-NKDNGKCPYIHD 1915
N L+R + + ++ KV+ S+ R ++ + + C F +FG C N + G C HD
Sbjct: 308 NHLVR---KSYGIKSNNKVKQKSIQILRNKMQKNNQPCLIFQKFGYCSNHEKGICVKRHD 364
Query: 1916 PSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNAST 1975
+I++C KFL+G C C L+H V PE+MP C YFL+G CT CPYRH+ V+ +
Sbjct: 365 KKQISLCKKFLQGNCLLDKCPLSHDVGPEKMPTCKYFLEGCCTRDACPYRHIKVSSSTPI 424
Query: 1976 CEGFLKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSRKPKN 2035
C FL+GYCA G EC+++H +CP F+ T C+ G C H K++S K ++ N
Sbjct: 425 CIDFLQGYCAKGSECKQRHENLCPEFEKTEKCSKGEYCPYPH-KTQSPSKNQNHLKRKYN 483
Query: 2036 THGRYFGSMLVEDSES 2051
H + + +D+ S
Sbjct: 484 MHCNQTVTTVTKDTLS 499
>gi|350420761|ref|XP_003492616.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like [Bombus
impatiens]
Length = 580
Score = 139 bits (351), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 109/196 (55%), Gaps = 6/196 (3%)
Query: 1858 NQLIRDPKRRARVLASEKVRW-SLHTARLRLARKRKYCQFFTRFGKC-NKDNGKCPYIHD 1915
N L+R + + ++ KV+ S+ R ++ + + C F +FG C N + G C HD
Sbjct: 302 NHLVR---KSYGIKSNNKVKQKSIQILRNKMQKNNQPCLIFQKFGYCSNHEKGICVKRHD 358
Query: 1916 PSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNAST 1975
+I++C KFL+G C C L+H V PE+MP C YFL+G CT CPYRH+ V+ +
Sbjct: 359 KKQISLCKKFLQGNCLLDKCPLSHDVGPEKMPTCKYFLEGCCTRDACPYRHIKVSSSTPI 418
Query: 1976 CEGFLKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSRKPKN 2035
C FL+GYCA G EC+++H +CP F+ T C+ G C H K +S+ K ++ N
Sbjct: 419 CIDFLQGYCAKGSECKQRHENLCPEFEKTEKCSKGEYCPYPH-KIQSSSKNQNHLKRKYN 477
Query: 2036 THGRYFGSMLVEDSES 2051
H + + +D+ S
Sbjct: 478 MHCSQTVTTVTKDTLS 493
>gi|195127421|ref|XP_002008167.1| GI13344 [Drosophila mojavensis]
gi|193919776|gb|EDW18643.1| GI13344 [Drosophila mojavensis]
Length = 615
Score = 137 bits (346), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 140/302 (46%), Gaps = 32/302 (10%)
Query: 1710 AISRKLLLLRKRDTVYTRSNHGFSLRKYKVLSVGGSSLKWSKSIENRSKKVNEEATLAVA 1769
AI+ K L L+K + + N S+ +S+ G + + K+ +N+ K++ + +
Sbjct: 232 AIAGKKLSLKKSNILKPSVNKSLSM-----VSIHG--VMYKKTAKNKLTKLDPNVSAKKS 284
Query: 1770 AVEKKRQENGAESFASETKIRIRSCRERIFRIGSVRYKMDSSRRTLQRISDDSSPCAAGP 1829
A ++R+ NG+ R + ++ +D S L R+ SSP
Sbjct: 285 APAQQRKANGSIG--------------RTLFVRGTKFVLDPSGCRLTRVPAHSSPLIVNK 330
Query: 1830 TLEKNAKKSYIPRRLVIGNDEYVRIGNG-NQLIRDPKRRARVLASEKVRWSLHTARLRLA 1888
+L RR+ IG YV N IR +R + SL L
Sbjct: 331 SLR---------RRIDIGGLTYVSSPKAQNVFIRTTNHVSRAHLMTAKQRSLQVLNRSLV 381
Query: 1889 RKRKYCQFFTRFGKCNKDN-GKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMP 1947
+ C + R GKC + GKC +HD ++A+C FL+G C+ DC L+H V E+MP
Sbjct: 382 KTNVPCAIYQRLGKCAAHSRGKCRRLHDKRQVAICPSFLRGECTKKDCLLSHNVTLEKMP 441
Query: 1948 DCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSC 2007
C YFL+G+C ++CPY H ++ A C FL+GYCA +C +H +VCP + G C
Sbjct: 442 VCRYFLRGVCVREDCPYLHKKLSRKAEICIDFLRGYCARAADCNMRHEFVCPEYARRGKC 501
Query: 2008 AL 2009
L
Sbjct: 502 EL 503
>gi|303274986|ref|XP_003056803.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461155|gb|EEH58448.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 237
Score = 136 bits (342), Expect = 1e-28, Method: Composition-based stats.
Identities = 68/152 (44%), Positives = 89/152 (58%), Gaps = 15/152 (9%)
Query: 1883 ARLRLARKRK-------YCQFFTRFGKCNK----DNGKCPYIHDPSKIAVCTKFLKGLCS 1931
AR+ A+ +K C F R GKC++ +C HDP K+AVCTK+L G C
Sbjct: 77 ARIATAKAKKPAPVGGLLCGRFLRTGKCSRRFATGASRCQRAHDPDKVAVCTKWLAGKCD 136
Query: 1932 NS-DCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDEC 1990
+ +C L H+ +PERMP CSYFL G C+ + CPY HV+V+P A C+ FL GYC G +C
Sbjct: 137 DDGECTLQHRAVPERMPTCSYFLAGACSARECPYLHVNVDPAAPVCQAFLDGYCPRGLQC 196
Query: 1991 RKKHSYVCPTFKATGSCALGAKCRLHHPKSRS 2022
R KH+ VCP A C CR HHP+ R+
Sbjct: 197 RNKHTMVCPNGTA---CPNRKACRFHHPRQRA 225
>gi|170027604|ref|XP_001841687.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167862257|gb|EDS25640.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 600
Score = 135 bits (341), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 117/242 (48%), Gaps = 22/242 (9%)
Query: 1778 NGAESFASETKIRIRS----------CRERIFRIGSVRYKMDSSRRTLQRISDDSSPCAA 1827
NG +S K++++S CRER I R+ +DSS L+++ +
Sbjct: 240 NGVLYRSSTNKLQVQSANPAPSRSGDCRERSLTIRGTRFLLDSSGTKLRKVPSMTEDATM 299
Query: 1828 GPTLEKNAKKSYIPRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRL 1887
G A+ R+ IG Y + G +R R R S S+ +L
Sbjct: 300 G-----EARLG----RIDIGGLTY-KPGKDGTFVRTDVHRTRTHLSLAKHKSIQVLTNKL 349
Query: 1888 ARKRKYCQFFTRFGKCNKD-NGKCPYIHDPSKIAVCTKFLKGLCS-NSDCKLTHKVIPER 1945
+ CQ + R GKC+ GKCP +HDP + +C +FLKG C+ + C L+H V E+
Sbjct: 350 RKCNIPCQIYRRLGKCSAQLKGKCPRLHDPKHVIICPRFLKGECTLAAGCLLSHDVSLEK 409
Query: 1946 MPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATG 2005
MP C +FL+G C +CPY H V+ CE FL+GYC +C+++H +VCP + G
Sbjct: 410 MPVCRFFLEGRCVKNDCPYLHKKVSETERICEDFLRGYCPLAAKCKRRHEFVCPEYDRLG 469
Query: 2006 SC 2007
C
Sbjct: 470 VC 471
>gi|189235966|ref|XP_969617.2| PREDICTED: similar to CG6694 CG6694-PA [Tribolium castaneum]
Length = 472
Score = 134 bits (337), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 75/116 (64%), Gaps = 1/116 (0%)
Query: 1894 CQFFTRFGKC-NKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYF 1952
C F ++GKC K G C +H+P +I +CT+FL+G C N C L+HKV E+MP C YF
Sbjct: 277 CPIFRKYGKCPGKAAGTCFKLHNPDQIVLCTRFLQGACRNERCLLSHKVSHEKMPTCKYF 336
Query: 1953 LQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCA 2008
L GLC+ NCPY HV ++P A C FL+G+C G EC K+H ++CP F+ C+
Sbjct: 337 LDGLCSKDNCPYLHVKISPKADICRDFLEGFCKKGAECDKRHQFLCPEFEKNKKCS 392
>gi|158294672|ref|XP_001688720.1| AGAP005735-PA [Anopheles gambiae str. PEST]
gi|157015674|gb|EDO63726.1| AGAP005735-PA [Anopheles gambiae str. PEST]
Length = 707
Score = 134 bits (336), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 130/278 (46%), Gaps = 27/278 (9%)
Query: 1792 RSCRERIFRIGSVRYKMDSSRRTLQRISDDSSPCAAGPTLEKNAKKSYI-PR--RLVIGN 1848
R +E I VR+ +D + L+ + + P A + Y PR R+ IG
Sbjct: 321 RKTKEHFLIIRGVRFALDRTGMKLRSVGGTTPPTAI------TGSRGYAEPRLNRIDIGG 374
Query: 1849 DEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRFGKC-NKDN 1907
Y +G IR R R S + S+ +L + + C + R GKC
Sbjct: 375 LTYKARKDGT-FIRTDSHRTRNHLSVAKQRSIQVLASKLKKCNEPCHIYRRLGKCLAHQR 433
Query: 1908 GKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIP-ERMPDCSYFLQGLCTNKNCPYRH 1966
GKCP +HDP +++C +FL+G C C L+H + E+MP C +FL+G C CPY H
Sbjct: 434 GKCPKVHDPKHVSICQRFLRGECLLDGCLLSHDITSLEKMPVCRFFLEGRCVRDPCPYLH 493
Query: 1967 VHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKK 2026
V+ + C+ FL G+C+ D+C +H + CPTF+ G C A+C H K S K+
Sbjct: 494 KKVSESVRICDAFLNGFCSLADKCPNRHVFQCPTFEQEGKCD-RARCPYPHGKKESRRKQ 552
Query: 2027 SRRSR-------KPKN----THGRYF---GSMLVEDSE 2050
+ S +PK H RY+ G +L ++E
Sbjct: 553 DKPSTSMVAHKSEPKEPATVPHVRYYKDEGQLLTIETE 590
>gi|299469737|emb|CBN76591.1| expressed unknown protein [Ectocarpus siliculosus]
Length = 1052
Score = 132 bits (332), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 69/103 (66%), Gaps = 2/103 (1%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFL-KGLCSNSD-CKLTHKVIPERMPDCSY 1951
C FF RFGKC+K + +C Y+HD +K+AVC FL KG C + C LTH V E+MP C Y
Sbjct: 771 CLFFCRFGKCSKSDEECRYVHDRAKVAVCRAFLRKGGCDKGNKCLLTHAVQAEKMPVCIY 830
Query: 1952 FLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
F +G+C NCPY HV V+ NA+ C FLKGYC DG CR KH
Sbjct: 831 FEKGMCFTPNCPYLHVKVSQNAAVCPRFLKGYCPDGTACRLKH 873
>gi|391332409|ref|XP_003740627.1| PREDICTED: uncharacterized protein LOC100904311 [Metaseiulus
occidentalis]
Length = 623
Score = 130 bits (326), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 86/144 (59%), Gaps = 9/144 (6%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDC 1949
+RK C FF RFGKC+K + C + HD K+++CTKFL+G C C +H+V ++MP C
Sbjct: 452 QRKDCIFFIRFGKCHKGDN-CKFQHDLKKVSICTKFLRGTCKAEKCPFSHEVEKDKMPLC 510
Query: 1950 SYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCAL 2009
SYF +GLC +CPYRH + + CE FL+G+C G +C K+H VC + C+
Sbjct: 511 SYFQRGLCKASDCPYRHSYFRKDIPHCENFLRGFCELGQQCPKQHVLVCTSV----GCSK 566
Query: 2010 GAK-CRLHHPKSR---SNGKKSRR 2029
+ C LHH K ++ KK RR
Sbjct: 567 DPRVCPLHHKKKTKEIASKKKKRR 590
>gi|125979563|ref|XP_001353814.1| GA19787 [Drosophila pseudoobscura pseudoobscura]
gi|54640798|gb|EAL29549.1| GA19787 [Drosophila pseudoobscura pseudoobscura]
Length = 600
Score = 129 bits (325), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 92/176 (52%), Gaps = 3/176 (1%)
Query: 1842 RRLVIGNDEYVRIG-NGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRF 1900
RR+ IG YV N IR +R + SL L + C + +
Sbjct: 322 RRIDIGGLTYVASSKTKNVFIRTTNHVSRAHLITARQRSLTLLNKSLVKTNVPCAIYQKL 381
Query: 1901 GKC-NKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLCTN 1959
GKC GKC +HD ++ +C FL+G C+ SDC L+H V E+MP C Y+L+G+C
Sbjct: 382 GKCVAHSRGKCRKLHDKRQVTICPSFLRGECTKSDCLLSHNVTLEKMPVCRYYLRGVCVR 441
Query: 1960 KNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRL 2015
++CPY H ++ N C F++GYC+ EC K+H + CP + G+C L AKCR
Sbjct: 442 EDCPYLHKKLSRNTEICIDFVRGYCSLAAECNKRHEFACPELQRKGTCEL-AKCRF 496
>gi|212571154|gb|ACJ35277.1| GA19787 [Drosophila pseudoobscura bogotana]
Length = 600
Score = 129 bits (325), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 92/176 (52%), Gaps = 3/176 (1%)
Query: 1842 RRLVIGNDEYVRIG-NGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRF 1900
RR+ IG YV N IR +R + SL L + C + +
Sbjct: 322 RRIDIGGLTYVASSKTKNVFIRTTNHVSRAHLITARQRSLTLLNKSLVKTNVPCAIYQKL 381
Query: 1901 GKC-NKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLCTN 1959
GKC GKC +HD ++ +C FL+G C+ SDC L+H V E+MP C Y+L+G+C
Sbjct: 382 GKCVAHSRGKCRKLHDKRQVTICPSFLRGECTKSDCLLSHNVTLEKMPVCRYYLRGVCVR 441
Query: 1960 KNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRL 2015
++CPY H ++ N C F++GYC+ EC K+H + CP + G+C L AKCR
Sbjct: 442 EDCPYLHKKLSRNTEICIDFVRGYCSLAAECNKRHEFACPELQRKGTCEL-AKCRF 496
>gi|328874246|gb|EGG22612.1| hypothetical protein DFA_04742 [Dictyostelium fasciculatum]
Length = 542
Score = 129 bits (325), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 71/108 (65%), Gaps = 5/108 (4%)
Query: 1893 YCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVI----PERMPD 1948
+C FF RFGKCN + KC + HDP ++ +C KF+ G C + C L HK + PE+MP
Sbjct: 362 HCLFFNRFGKCN-NGDKCRFEHDPKRVRICFKFISGKCDDETCTLQHKEVSELDPEQMPV 420
Query: 1949 CSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSY 1996
C FL+G+C N NCPY HVHV+ +A C FLKG+C+ G C+ KH+Y
Sbjct: 421 CYQFLRGMCMNDNCPYLHVHVSRDAQVCPDFLKGFCSKGSSCQMKHTY 468
>gi|390369232|ref|XP_001187951.2| PREDICTED: uncharacterized protein LOC755007, partial
[Strongylocentrotus purpuratus]
Length = 962
Score = 129 bits (325), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 68/97 (70%), Gaps = 3/97 (3%)
Query: 1893 YCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSD--CKLTHKVIPERMPDCS 1950
YC+F+ R+G+C++ + KCPYIHDP K+AVCT+FL+G C +D C +HK ++MP C
Sbjct: 865 YCKFYNRYGRCHRGD-KCPYIHDPEKVAVCTQFLRGTCKKTDGSCPFSHKASKDKMPVCV 923
Query: 1951 YFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADG 1987
YFL+G+C +CPY HV V+ A C+ FL GYC G
Sbjct: 924 YFLKGVCNRDDCPYSHVKVSKKAEVCQEFLHGYCPRG 960
>gi|443684202|gb|ELT88206.1| hypothetical protein CAPTEDRAFT_70214, partial [Capitella teleta]
gi|443706759|gb|ELU02673.1| hypothetical protein CAPTEDRAFT_77329, partial [Capitella teleta]
Length = 109
Score = 128 bits (322), Expect = 3e-26, Method: Composition-based stats.
Identities = 51/103 (49%), Positives = 70/103 (67%), Gaps = 1/103 (0%)
Query: 1892 KYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSY 1951
KYC ++ RFG+C + N KCP HDP ++AVCT+FL+G C +DC +H V E+MP C +
Sbjct: 6 KYCIYYNRFGRCYRGN-KCPNTHDPKRVAVCTRFLRGTCKITDCAFSHVVAAEKMPTCEH 64
Query: 1952 FLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
FL+G C+ +CPY HV V+ NA C F G+C D+C+KKH
Sbjct: 65 FLRGACSRDHCPYLHVKVSENAEVCPAFAIGFCPLADKCKKKH 107
>gi|195441547|ref|XP_002068569.1| GK20542 [Drosophila willistoni]
gi|194164654|gb|EDW79555.1| GK20542 [Drosophila willistoni]
Length = 629
Score = 128 bits (322), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 92/177 (51%), Gaps = 3/177 (1%)
Query: 1838 SYIPRRLV-IGNDEYVRIGNG-NQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQ 1895
S +PRR + +G Y+ N IR +R + SLH L + C
Sbjct: 349 SKMPRRRIDLGGLTYIASAKAQNVFIRTTNHLSRAHLMSARQRSLHMLNGSLVKTNVPCA 408
Query: 1896 FFTRFGKCNKDN-GKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQ 1954
F R GKC + GKC +HD ++A+C +FL G C+ DC L+H V E+MP C ++L+
Sbjct: 409 IFQRLGKCAAHSRGKCRKLHDKRQVAICPRFLHGDCTKKDCLLSHNVSLEKMPVCRFYLR 468
Query: 1955 GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALGA 2011
G+C ++CPY H + A C FL+GYC EC K+H ++CP + G C + +
Sbjct: 469 GVCVREDCPYLHKKLGRKAEICIEFLRGYCPLAAECNKRHEFICPEVERNGKCEVAS 525
>gi|195376361|ref|XP_002046965.1| GJ13173 [Drosophila virilis]
gi|194154123|gb|EDW69307.1| GJ13173 [Drosophila virilis]
Length = 581
Score = 128 bits (321), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 105/215 (48%), Gaps = 11/215 (5%)
Query: 1797 RIFRIGSVRYKMDSSRRTLQRISDDSSPCAAGPTLEKNAKKSYIPRRLVIGNDEYVRIGN 1856
R + ++ +D S L R++ S P L N + R+ IG YV N
Sbjct: 271 RTLFVRGTKFVLDPSGCRLTRVAPHS------PQLSINKS---LRLRIDIGGLTYVSSPN 321
Query: 1857 G-NQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRFGKCNKDN-GKCPYIH 1914
N IR +R + SL L + C + R GKC + GKC +H
Sbjct: 322 TQNVFIRTTNHVSRAHLMTAKQRSLQLLNRSLVKTNVPCAIYQRLGKCAAHSRGKCRRLH 381
Query: 1915 DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNAS 1974
D ++A+C FL+G C+ +DC L+H V E+MP C Y+L+G+C ++CPY H ++ A
Sbjct: 382 DKRQVAICPSFLRGECAKTDCLLSHNVTLEKMPVCRYYLRGVCVREDCPYLHKKLSRKAE 441
Query: 1975 TCEGFLKGYCADGDECRKKHSYVCPTFKATGSCAL 2009
C FL+GYCA +C +H +VCP + G C L
Sbjct: 442 ICIDFLRGYCARAADCNMRHEFVCPEYARRGKCEL 476
>gi|312378313|gb|EFR24927.1| hypothetical protein AND_10177 [Anopheles darlingi]
Length = 494
Score = 127 bits (320), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 115/251 (45%), Gaps = 23/251 (9%)
Query: 1795 RERIFRIGSVRYKMDSSRRTLQRISDDSSPCAAGPTLEK-----NAKKSYIPRRLVIGND 1849
+E++ I R+ +D + L+ I+ A G K A + + R+ IG
Sbjct: 140 KEQVLVIRGTRFALDRTGMRLRTIA------ATGDVERKVGGSLRAPEPHRMHRIDIGGL 193
Query: 1850 EYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRFGKC-NKDNG 1908
Y +G +R R R S + SL RL + + C + R GKC G
Sbjct: 194 TYKARKDGT-FVRTDVHRTRNHLSVAKQRSLQVLTSRLRKCNEPCHIYRRLGKCLAHSRG 252
Query: 1909 KCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVH 1968
KCP +HDP I++C KFL G C+ C L+H V E+MP C +FL+G C +CPY H
Sbjct: 253 KCPKLHDPKHISICRKFLSGECTVKGCLLSHNVTLEKMPVCRFFLEGRCVRDDCPYLHKK 312
Query: 1969 VNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSR 2028
V+ C+ FL G+C D+C +H + CP F+ G C KC H R
Sbjct: 313 VSEKERICDAFLNGFCPLADKCPNRHVFQCPEFERNGRCE-RLKCPYPH---------GR 362
Query: 2029 RSRKPKNTHGR 2039
+ KPK T R
Sbjct: 363 KEIKPKPTPPR 373
>gi|194748977|ref|XP_001956917.1| GF10163 [Drosophila ananassae]
gi|190624199|gb|EDV39723.1| GF10163 [Drosophila ananassae]
Length = 623
Score = 127 bits (320), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 113/242 (46%), Gaps = 15/242 (6%)
Query: 1792 RSCRERIFRIGSVRYKMDSSRRTLQRISDDSSP--CAAGPTLEKNAKKSYIPRRLVIGND 1849
R+ R + ++ +D S L R+S S A+ P L N RR+ IG
Sbjct: 292 RTLSGRTLFVSGNKFVLDPSGCRLTRVSPKSPTEVTASAPKLSINRTTL---RRIDIGGL 348
Query: 1850 EYVR-IGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRFGKCNK-DN 1907
YV N IR +R SL LA+ C F + GKC
Sbjct: 349 TYVASPKTQNVFIRTTNHLSRAHLITARHRSLTLLNKPLAKTNVPCAIFQKLGKCAAHSR 408
Query: 1908 GKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHV 1967
GKC +HD ++A+C +FL+G C+ +DC L+H V E+MP C YFL+G+C ++CPY H
Sbjct: 409 GKCRKLHDKRQVAICPRFLRGECTKTDCLLSHNVTLEKMPVCRYFLRGVCVREDCPYLHK 468
Query: 1968 HVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALG--------AKCRLHHPK 2019
++ C F++GYC EC K+H + CP + G C L K RL P+
Sbjct: 469 KLSRKTEICIDFVRGYCPRAAECNKRHEFACPELERNGKCELSDCVFCQKKPKQRLIRPR 528
Query: 2020 SR 2021
S+
Sbjct: 529 SK 530
>gi|154308824|ref|XP_001553747.1| hypothetical protein BC1G_07940 [Botryotinia fuckeliana B05.10]
gi|347838641|emb|CCD53213.1| hypothetical protein [Botryotinia fuckeliana]
Length = 487
Score = 127 bits (320), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 96/180 (53%), Gaps = 19/180 (10%)
Query: 1841 PRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRF 1900
P+ +IG ++ R NGN R + A+ K + + + C+ FT
Sbjct: 255 PKTTLIGGVKFYRSKNGNMY-----REGIIKATRK---------HGVVKINEPCKSFTNT 300
Query: 1901 GKCNKDNGKCPYIHDPSKIAVCTKFL-KGLCSNSD-CKLTHKVIPERMPDCSYFLQGLCT 1958
G CNK KC YIHDPSK+ VC FL KG C N D C L+H + PER P+C +F +G C+
Sbjct: 301 GTCNK-GPKCRYIHDPSKVGVCKAFLLKGECPNGDSCDLSHDLTPERTPNCLHFAKGNCS 359
Query: 1959 NKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
N +C Y HV V+P A C F + GYC G C ++H + CP F TG+C C+L H
Sbjct: 360 NSDCRYTHVRVSPTAMVCRSFGIYGYCDKGTTCTERHVHECPDFSNTGTCTTKG-CKLPH 418
>gi|195014242|ref|XP_001983987.1| GH16195 [Drosophila grimshawi]
gi|193897469|gb|EDV96335.1| GH16195 [Drosophila grimshawi]
Length = 581
Score = 127 bits (319), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 92/171 (53%), Gaps = 4/171 (2%)
Query: 1842 RRLVIGNDEYVRIGNGNQL-IRDPKRRARV-LASEKVRWSLHTARLRLARKRKYCQFFTR 1899
RR+ IG YV + IR +R L + K R S+ L + C F R
Sbjct: 307 RRIDIGGLTYVSSAKAQHVFIRTTNHVSRAHLITAKQR-SMQLLNRSLVKTNVPCAIFQR 365
Query: 1900 FGKCNK-DNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLCT 1958
GKC GKC +HD ++A+C FL+G C+ +DC L+H V E+MP C Y+L+G+C
Sbjct: 366 LGKCAAYSRGKCRRLHDKRQVAICPSFLRGECTKADCLLSHNVTLEKMPVCRYYLRGVCV 425
Query: 1959 NKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCAL 2009
++CPY H ++ A C FL+GYCA +C +H ++CP F +G C L
Sbjct: 426 REDCPYLHKKLSRKAEICIDFLRGYCARAADCNMRHEFLCPQFARSGKCDL 476
>gi|296415930|ref|XP_002837636.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633514|emb|CAZ81827.1| unnamed protein product [Tuber melanosporum]
Length = 488
Score = 126 bits (317), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 109/216 (50%), Gaps = 33/216 (15%)
Query: 1805 RYKMDSSRRTLQRISDDSSPCAAGPTLEKNAKKSYIPRRLVIGNDEYVRIGNGNQLIRDP 1864
RYK+ + L +ISD GP +NAK + P++ V+G +VR NGN
Sbjct: 217 RYKVAAGGSKLIKISD-------GP---QNAKST--PKKAVVGGVNFVRSKNGNLW---- 260
Query: 1865 KRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTK 1924
R V AS K R +K C++++ GKC K+ C Y HDP+K+A+C +
Sbjct: 261 -RVGLVKASHKPR-----------HIKKPCKYYSNTGKC-KNGMSCLYTHDPNKVAICPR 307
Query: 1925 FLKG-LCSNSD-CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLK- 1981
F++ C D C L+H P MP C +FL+G C+N CP+ HV VNP A C F
Sbjct: 308 FIQANSCPEGDSCDLSHTPSPHCMPSCVHFLRGNCSNDKCPFTHVKVNPAAPICRPFATL 367
Query: 1982 GYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
GYC G EC ++H CP F G C C+L H
Sbjct: 368 GYCDKGAECTERHVRECPDFDEKGVCT-DKTCKLQH 402
>gi|357620390|gb|EHJ72601.1| hypothetical protein KGM_18449 [Danaus plexippus]
Length = 720
Score = 126 bits (317), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 73/105 (69%), Gaps = 1/105 (0%)
Query: 1894 CQFFTRFGKC-NKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYF 1952
C+ FT++GKC KD GKC ++HD +++C KF+KG+C + +C L+H++ ++MP C ++
Sbjct: 528 CRLFTKYGKCLRKDYGKCEFLHDKKHVSLCRKFIKGICHDGNCTLSHELSTKKMPTCYFY 587
Query: 1953 LQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYV 1997
L+G+CT +NCPY HV +N C+ F+KGYC GD C +H V
Sbjct: 588 LRGMCTKQNCPYLHVKLNEKTKICQDFVKGYCEKGDNCPFRHVKV 632
Score = 45.1 bits (105), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 102/249 (40%), Gaps = 47/249 (18%)
Query: 1736 KYKVLSVGGSSLKWSKSIENRSKKVNEEATLAVAAVEKKRQENGAESFASETKIRIRSCR 1795
KYK + + S LK S + + K+ + +L ++A + R SF + K R + +
Sbjct: 428 KYKTVPIS-SYLKVSSQVL-MNNKLKQPPSLNISAKVQGRGAKICSSFVLDNKNRYKFVK 485
Query: 1796 ERIFRIGSVRYKMDSSRRTLQRISDDSSPCAAGPTLEK-NAKKSYIPRRLVIGNDEYVRI 1854
++ SV +D+ ++T + + S + T+ K K + IP RL + +R
Sbjct: 486 SKV----SVSI-VDNVKQTPMKFKKNVSLNNSKITVGKAKFKVNNIPCRLFTKYGKCLRK 540
Query: 1855 GNGN-QLIRDPKRRARVLASEKVRWSLHTARLRLA-----RKRKYCQFFTRFGKCNKDNG 1908
G + + D K + L + ++ H L+ +K C F+ R G C K N
Sbjct: 541 DYGKCEFLHDKKHVS--LCRKFIKGICHDGNCTLSHELSTKKMPTCYFYLR-GMCTKQN- 596
Query: 1909 KCPYIHDP--SKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRH 1966
CPY+H K +C F+KG C D NCP+RH
Sbjct: 597 -CPYLHVKLNEKTKICQDFVKGYCEKGD--------------------------NCPFRH 629
Query: 1967 VHVNPNAST 1975
V V + +T
Sbjct: 630 VKVQESKTT 638
>gi|392866572|gb|EAS27801.2| CCCH zinc finger protein [Coccidioides immitis RS]
Length = 456
Score = 125 bits (315), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/241 (34%), Positives = 122/241 (50%), Gaps = 30/241 (12%)
Query: 1801 IGSVRYKMDSSRRTLQRISDDSSPCAAGPTLEKNAKKSYIPRRLVIGNDEYVRIGNGNQL 1860
I + +++ L R+S+D P AA T P+++ +G +VR NGN
Sbjct: 185 IQEIPFQVIKGGSKLIRLSND--PTAANAT----------PKKVNVGGVTFVRSKNGNL- 231
Query: 1861 IRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIA 1920
R V++ +K T +R +K + C+ FT G C K KC YIHDP+K+A
Sbjct: 232 ----HRLGAVVSKKK------TGAVR--KKDELCKRFTATGSCYK-GPKCSYIHDPNKVA 278
Query: 1921 VCTKFLK-GLCS-NSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEG 1978
+C +FL+ G CS C L+H+ PER P C +F++G C+N C Y H+ V P A C
Sbjct: 279 ICKEFLQTGKCSAGPSCDLSHEPSPERSPACVHFIRGRCSNPACRYAHIRVTPGAPVCRD 338
Query: 1979 F-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSRKPKNTH 2037
F + GYC+ GD+C+ +H CP + G CA KC L H +K ++ NTH
Sbjct: 339 FAILGYCSKGDQCQDRHVIECPDYANMGKCA-KQKCPLPHIDRAGQIRKLAANKADNNTH 397
Query: 2038 G 2038
Sbjct: 398 A 398
>gi|303321145|ref|XP_003070567.1| Zinc finger CCCH type domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240110263|gb|EER28422.1| Zinc finger CCCH type domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|320035965|gb|EFW17905.1| zinc finger family protein [Coccidioides posadasii str. Silveira]
Length = 484
Score = 125 bits (314), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 121/240 (50%), Gaps = 30/240 (12%)
Query: 1801 IGSVRYKMDSSRRTLQRISDDSSPCAAGPTLEKNAKKSYIPRRLVIGNDEYVRIGNGNQL 1860
I + +++ L R+S+D P AA T P+++ +G +VR NGN
Sbjct: 185 IQEIPFQVIKGGSKLIRLSND--PTAANAT----------PKKVNVGGVTFVRSKNGNL- 231
Query: 1861 IRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIA 1920
R V++ +K T +R +K + C+ FT G C K KC YIHDP+K+A
Sbjct: 232 ----HRLGAVVSKKK------TGAVR--KKDELCKRFTATGSCYK-GPKCSYIHDPNKVA 278
Query: 1921 VCTKFLK-GLCS-NSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEG 1978
+C +FL+ G CS C L+H+ PER P C +F++G C+N C Y H+ V P A C
Sbjct: 279 ICKEFLQTGKCSAGPSCDLSHEPSPERSPACVHFIRGRCSNPACRYAHIRVTPGAPVCRD 338
Query: 1979 F-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSRKPKNTH 2037
F + GYC GD+C+ +H CP + G CA KC L H +K ++ NTH
Sbjct: 339 FAILGYCGKGDQCQDRHVIECPDYANMGKCA-KQKCPLPHIDRAGQIRKLAANKADNNTH 397
>gi|295665528|ref|XP_002793315.1| CCCH zinc finger protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278229|gb|EEH33795.1| CCCH zinc finger protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 456
Score = 124 bits (312), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 99/183 (54%), Gaps = 18/183 (9%)
Query: 1838 SYIPRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFF 1897
S P+++ +G +VR GN R V++ K + + +K + C+ F
Sbjct: 211 SVTPKKVNVGGVNFVRSKKGNL-----HRLGSVVSRRK--------NMPIKKKDELCKRF 257
Query: 1898 TRFGKCNKDNGKCPYIHDPSKIAVCTKFLK-GLC-SNSDCKLTHKVIPERMPDCSYFLQG 1955
T G C K CPYIHDP K+A+C +FL+ G C + C L+H PER P C +FL+G
Sbjct: 258 TSTGSCFK-GPNCPYIHDPHKVAICKEFLQTGKCPAGLACDLSHDPSPERSPACLHFLRG 316
Query: 1956 LCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCR 2014
C+N +C Y HV VNP A C F + GYC GD C ++H + CP + TG+C KC+
Sbjct: 317 RCSNPSCRYAHVRVNPGAPVCRDFAILGYCIKGDTCDQRHVHECPDYANTGNCG-NRKCQ 375
Query: 2015 LHH 2017
L H
Sbjct: 376 LPH 378
>gi|195491177|ref|XP_002093450.1| GE21301 [Drosophila yakuba]
gi|194179551|gb|EDW93162.1| GE21301 [Drosophila yakuba]
Length = 599
Score = 124 bits (312), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 111/221 (50%), Gaps = 10/221 (4%)
Query: 1792 RSCRERIFRIGSVRYKMDSSRRTLQRISDDSSPCAAGPTLEKNAKKSYIPRRLVIGNDEY 1851
R+ R + ++ +D S L R+ P AAG ++ + +S + RR+ IG Y
Sbjct: 282 RTLSGRTLFVSGNKFILDPSGCRLTRVP----PSAAG-AVQSSVNRSIL-RRIDIGGLTY 335
Query: 1852 VRIGNG-NQLIRDPKRRARV-LASEKVRWSLHTARLRLARKRKYCQFFTRFGKCNKDN-G 1908
V N +R +R L + K R SL L + C F + GKC N G
Sbjct: 336 VASPKALNVFVRTTNHVSRAHLITAKQR-SLTLLNKSLVKTNVPCAIFQKLGKCAAHNRG 394
Query: 1909 KCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVH 1968
KC +HD ++A+C FL+G C+ +C L+H V E+MP C Y+L+G+C ++CPY H
Sbjct: 395 KCRKLHDKRQVAICVSFLRGECTKPECLLSHNVTLEKMPVCRYYLRGVCVREDCPYLHKK 454
Query: 1969 VNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCAL 2009
++ C F++GYC EC K+H + CP + G C L
Sbjct: 455 LSSKTEICIDFVRGYCPLAAECNKRHEFACPELERKGKCEL 495
>gi|255931263|ref|XP_002557188.1| Pc12g03020 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581807|emb|CAP79929.1| Pc12g03020 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 443
Score = 124 bits (312), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 113/220 (51%), Gaps = 31/220 (14%)
Query: 1801 IGSVRYKMDSSRRTLQRISDDSSPCAAGPTLEKNAKKSYIPRRLVIGNDEYVRIGNGNQL 1860
+ V +++ + L R+S+D P +A T P+R+ + + +VR NGN
Sbjct: 180 VNDVAFRVANGGSKLIRVSND--PSSANNT----------PKRVTVADVPFVRSKNGNL- 226
Query: 1861 IRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIA 1920
R +A +K HT + ++ + C+ FT G C K CP++HDPSK+A
Sbjct: 227 -----HRLGAVAMKKN----HTVK----KRDELCKRFTTTGTCYK-GPTCPFVHDPSKVA 272
Query: 1921 VCTKFLK-GLCS-NSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEG 1978
+C FL+ G C+ S C L+H+ P R P C +FL+G C N C Y HV V P A C
Sbjct: 273 MCKDFLQTGQCAAGSSCDLSHEPSPHRSPTCMHFLRGRCANPECRYAHVRVTPGAPVCRA 332
Query: 1979 FLK-GYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
F GYC GD C +KH + CP + TG+C +C+L H
Sbjct: 333 FATLGYCEKGDACEEKHVHECPDYANTGACH-KKRCQLPH 371
>gi|449297565|gb|EMC93583.1| hypothetical protein BAUCODRAFT_133464 [Baudoinia compniacensis UAMH
10762]
Length = 421
Score = 124 bits (311), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 116/236 (49%), Gaps = 34/236 (14%)
Query: 1797 RIFRIGSVRYKMDSSRRTLQRISDDSSPCAAGPTLEKNAKKSYIPRRLVIGNDEYVRIGN 1856
R I +R+++++ L R+SD S +AK++ PRR I ++ R N
Sbjct: 155 REMVIDGLRFQLNAQGSKLTRVSDPGS----------SAKET--PRRTKIAGVDFHRTKN 202
Query: 1857 GNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDP 1916
GN + RA LA R A R C+ FT+ G C C + HDP
Sbjct: 203 GNLI------RASALADPA----------RPAPLRPQCENFTKHGTCPY-GPICRFTHDP 245
Query: 1917 SKIAVCTKFLK-GLCSNSD-CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNAS 1974
+K+A+C FLK G C+ D C ++H++ R+P C YFL+G CTN C Y HV V+P A
Sbjct: 246 NKVAICKDFLKAGTCALGDSCDMSHEMTYHRVPACQYFLRGNCTNDACRYPHVFVSPAAP 305
Query: 1975 TCEGFLK-GYCADGDECRKKHSYVCPTFKATGSCA--LGAKCRLHHPKSRSNGKKS 2027
C F G+C G +C K+H + CP + G CA KC L HP S +K+
Sbjct: 306 VCRAFATLGFCVKGPDCDKRHVHECPDYANNGFCANRENGKCLLPHPDRASILRKA 361
>gi|195326023|ref|XP_002029730.1| GM24934 [Drosophila sechellia]
gi|194118673|gb|EDW40716.1| GM24934 [Drosophila sechellia]
Length = 596
Score = 124 bits (311), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 101/223 (45%), Gaps = 19/223 (8%)
Query: 1840 IPRRLVIGNDEYVRIGNG-NQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFT 1898
I RR+ IG YV N +R +R + SL L + C F
Sbjct: 319 ILRRIDIGGLTYVASPKALNVFVRTSNHVSRAHLITAKQRSLTLLNKSLVKTNVPCAIFQ 378
Query: 1899 RFGKC-NKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLC 1957
+ GKC GKC +HD ++A+C FL+G C+ DC L+H V E+MP C Y+L+G+C
Sbjct: 379 KLGKCVAHSRGKCRKLHDKRQVAICVSFLRGECTKPDCLLSHNVTLEKMPVCRYYLRGVC 438
Query: 1958 TNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
++CPY H ++ C F++GYC EC K+H + CP + G C L
Sbjct: 439 VREDCPYLHKKLSSKTEICIDFVRGYCPLAAECNKRHEFACPELERKGKCELPRCVFCKS 498
Query: 2018 PKSRSNGKKSR------------RSRKPKN-----THGRYFGS 2043
P R KSR +++P T RYFGS
Sbjct: 499 PSMRLAKVKSRPKLGSKPVAVADTAKEPSTAEELPTSSRYFGS 541
>gi|119180084|ref|XP_001241549.1| hypothetical protein CIMG_08712 [Coccidioides immitis RS]
Length = 473
Score = 124 bits (311), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 83/245 (33%), Positives = 123/245 (50%), Gaps = 21/245 (8%)
Query: 1801 IGSVRYKMDSSRRTLQRISDDSSPCAAGPTLEKNAKKSYIPRRLVIGNDEYVRIGNGN-- 1858
I + +++ L R+S+D P AA T P+++ +G +VR NGN
Sbjct: 185 IQEIPFQVIKGGSKLIRLSND--PTAANAT----------PKKVNVGGVTFVRSKNGNLH 232
Query: 1859 QLIRDPKRRARVLASEKVRWSLHTARLRLARKRK--YCQFFTRFGKCNKDNGKCPYIHDP 1916
+L ++ + E + S R A ++K C+ FT G C K KC YIHDP
Sbjct: 233 RLGAVVSKKCVSIPRESYKISDTGGRKTGAVRKKDELCKRFTATGSCYK-GPKCSYIHDP 291
Query: 1917 SKIAVCTKFLK-GLCS-NSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNAS 1974
+K+A+C +FL+ G CS C L+H+ PER P C +F++G C+N C Y H+ V P A
Sbjct: 292 NKVAICKEFLQTGKCSAGPSCDLSHEPSPERSPACVHFIRGRCSNPACRYAHIRVTPGAP 351
Query: 1975 TCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSRKP 2033
C F + GYC+ GD+C+ +H CP + G CA KC L H +K ++
Sbjct: 352 VCRDFAILGYCSKGDQCQDRHVIECPDYANMGKCA-KQKCPLPHIDRAGQIRKLAANKAD 410
Query: 2034 KNTHG 2038
NTH
Sbjct: 411 NNTHA 415
>gi|270003251|gb|EEZ99698.1| hypothetical protein TcasGA2_TC002458 [Tribolium castaneum]
Length = 489
Score = 124 bits (310), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 75/133 (56%), Gaps = 18/133 (13%)
Query: 1894 CQFFTRFGKC-NKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYF 1952
C F ++GKC K G C +H+P +I +CT+FL+G C N C L+HKV E+MP C YF
Sbjct: 277 CPIFRKYGKCPGKAAGTCFKLHNPDQIVLCTRFLQGACRNERCLLSHKVSHEKMPTCKYF 336
Query: 1953 LQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDE-----------------CRKKHS 1995
L GLC+ NCPY HV ++P A C FL+G+C G E C K+H
Sbjct: 337 LDGLCSKDNCPYLHVKISPKADICRDFLEGFCKKGAEVSMRHLAEPPHLEMWLQCDKRHQ 396
Query: 1996 YVCPTFKATGSCA 2008
++CP F+ C+
Sbjct: 397 FLCPEFEKNKKCS 409
>gi|259486862|tpe|CBF85065.1| TPA: CCCH zinc finger protein (AFU_orthologue; AFUA_8G05480)
[Aspergillus nidulans FGSC A4]
Length = 467
Score = 123 bits (309), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 95/180 (52%), Gaps = 18/180 (10%)
Query: 1841 PRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRF 1900
P+R+ + +VR NGN R + S++V ++ +K + CQ FT
Sbjct: 235 PKRVKVAGVTFVRSKNGNL------HRLGAVTSKRVPSAV-------KKKDELCQRFTTT 281
Query: 1901 GKCNKDNGKCPYIHDPSKIAVCTKFLK-GLCSNSD-CKLTHKVIPERMPDCSYFLQGLCT 1958
G C K CPYIHDP+K+A+C FL+ G CS + C L+H+ P R P C +FL+G C+
Sbjct: 282 GTCYK-GPSCPYIHDPNKVAICKDFLQTGKCSAGNSCDLSHEPSPHRSPACVHFLRGRCS 340
Query: 1959 NKNCPYRHVHVNPNASTCEGFLK-GYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
N C Y HV V P A C F GYC G+ C ++H + CP + TG C CRL H
Sbjct: 341 NPECRYAHVRVTPGAPVCRAFATLGYCDKGETCEERHVHECPDYANTGVCK-KKHCRLPH 399
>gi|194865880|ref|XP_001971649.1| GG15077 [Drosophila erecta]
gi|190653432|gb|EDV50675.1| GG15077 [Drosophila erecta]
Length = 602
Score = 123 bits (308), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 122/272 (44%), Gaps = 26/272 (9%)
Query: 1792 RSCRERIFRIGSVRYKMDSSRRTLQRISDDSSPCAAGPTLEKNAKKSYIPRRLVIGNDEY 1851
R+ R + ++ +D S L R+ P + G + + +S + RR+ IG Y
Sbjct: 281 RTLSGRTLFVSGNKFILDPSGCRLTRV-----PPSGGGATQSSVNRSIL-RRIDIGGLTY 334
Query: 1852 VRIGNG-NQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRFGKCNK-DNGK 1909
V N +R +R + SL L + C F + GKC GK
Sbjct: 335 VASPKALNVFVRTTNHVSRAHLITAKQRSLTLLNKSLVKTNVPCAIFQKLGKCAAHSRGK 394
Query: 1910 CPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHV 1969
C +HD ++A+C FL+G C+ +C L+H V E+MP C Y+L+G+C ++CPY H +
Sbjct: 395 CRKLHDKRQVAICVSFLRGECTKPECLLSHNVTLEKMPVCRYYLRGVCVREDCPYLHKKL 454
Query: 1970 NPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGK---K 2026
+ C F++GYC EC K+H + CP + G C L P+S+ K +
Sbjct: 455 SSKTEICIDFVRGYCPLAAECNKRHEFACPELERKGKCELPRCVFCKKPQSKRLAKVKSR 514
Query: 2027 SRRSRKPKN---------------THGRYFGS 2043
+++ KP T RYFGS
Sbjct: 515 PKQASKPVAVPDTAKEPATEEELPTSSRYFGS 546
>gi|315040053|ref|XP_003169404.1| hypothetical protein MGYG_08308 [Arthroderma gypseum CBS 118893]
gi|311346094|gb|EFR05297.1| hypothetical protein MGYG_08308 [Arthroderma gypseum CBS 118893]
Length = 444
Score = 122 bits (306), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 97/185 (52%), Gaps = 18/185 (9%)
Query: 1836 KKSYIPRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQ 1895
K + P+R+ +G +VR GN R V++ +K + ++ + C+
Sbjct: 203 KANVTPKRVNVGGVMFVRSKRGNL-----HRLGAVISKKKPG--------NVKKRNELCK 249
Query: 1896 FFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLK-GLC-SNSDCKLTHKVIPERMPDCSYFL 1953
FT G C K CPYIHDP+K+A+C FL+ G C + C L+H PER P C +FL
Sbjct: 250 RFTSTGTCFK-GPTCPYIHDPNKVAICKDFLQTGKCDAGLACDLSHDPSPERSPACLHFL 308
Query: 1954 QGLCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAK 2012
+G CTN C Y HVH+ P A C F + GYC+ G C +H + CP + TG+C K
Sbjct: 309 RGRCTNPCCRYTHVHITPGAPVCRDFAILGYCSKGATCEGRHVHECPDYANTGNCG-NKK 367
Query: 2013 CRLHH 2017
C L H
Sbjct: 368 CPLPH 372
>gi|281209923|gb|EFA84091.1| hypothetical protein PPL_03164 [Polysphondylium pallidum PN500]
Length = 508
Score = 122 bits (306), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 90/162 (55%), Gaps = 31/162 (19%)
Query: 1865 KRRARVLASEKVRWS--------LHTARLRLARKRKYCQFFTRFG--------------- 1901
K++ LAS+K+ + + A ++ +K +YC FF RFG
Sbjct: 333 KKKPLPLASKKIFKAPTKPIGDRMKAALKKMEKKTQYCLFFNRFGENNLEFLFLYSSTLE 392
Query: 1902 ------KCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIP-ERMPDCSYFLQ 1954
KCN +N C YIHD ++ VC K+L G C + +C L HK + ++MP C FL+
Sbjct: 393 YLLVECKCN-NNDSCKYIHDKDRVRVCPKYLSGKCEDENCTLQHKTVDIDQMPVCYQFLR 451
Query: 1955 GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSY 1996
G+CT++NCPY HV+V+ +A C FLKGYC +G EC +H+Y
Sbjct: 452 GMCTHENCPYLHVYVSRDAEVCPDFLKGYCPNGSECLLRHTY 493
>gi|325091430|gb|EGC44740.1| CCCH zinc finger domain-containing protein [Ajellomyces capsulatus
H88]
Length = 454
Score = 122 bits (305), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 101/180 (56%), Gaps = 18/180 (10%)
Query: 1841 PRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRF 1900
P+++ IG +VR GN R V++ +K + +K + C+ FT
Sbjct: 214 PKKVNIGGVNFVRSKKGNL-----HRLGSVVSRKKTG--------TVKKKNERCKRFTST 260
Query: 1901 GKCNKDNGKCPYIHDPSKIAVCTKFLK-GLCS-NSDCKLTHKVIPERMPDCSYFLQGLCT 1958
G C K CPYIHDP+K+A+C +FL+ G C+ S C L+H+ ER P C +FL+G C+
Sbjct: 261 GSCFK-GPNCPYIHDPNKVAICKEFLQTGKCAAGSACDLSHESSAERSPSCLHFLRGRCS 319
Query: 1959 NKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
N +C Y HV VNP A C F + GYC+ G+ C ++H + CP + TG+C KC+L H
Sbjct: 320 NPSCRYAHVRVNPGAPVCHDFAILGYCSKGENCDQRHVHECPDYANTGNCG-NRKCQLPH 378
>gi|261197808|ref|XP_002625306.1| CCCH zinc finger protein [Ajellomyces dermatitidis SLH14081]
gi|239595269|gb|EEQ77850.1| CCCH zinc finger protein [Ajellomyces dermatitidis SLH14081]
gi|239607692|gb|EEQ84679.1| CCCH zinc finger protein [Ajellomyces dermatitidis ER-3]
Length = 471
Score = 122 bits (305), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 106/192 (55%), Gaps = 18/192 (9%)
Query: 1829 PTLEKNAKKSYIPRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLA 1888
P L++ + + P+++ IG +VR GN R V++ +K +
Sbjct: 220 PFLDEPSAANVTPKKVNIGGVNFVRSKKGNL-----HRLGSVVSRKKTGA--------VK 266
Query: 1889 RKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLK-GLC-SNSDCKLTHKVIPERM 1946
+K + C+ FT G C K C YIHDP K+A+C +FL+ G C + C L+H+ ER
Sbjct: 267 KKNELCKRFTSTGSCFK-GPNCTYIHDPHKVAICKEFLQTGKCVAGLACDLSHEPSAERS 325
Query: 1947 PDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATG 2005
P C +FL+G C+N +C Y HV VNP A C F + GYC++G+ C ++H++ CP + TG
Sbjct: 326 PSCLHFLRGRCSNPSCRYAHVRVNPGAPVCRDFAILGYCSNGETCDQRHAHECPDYANTG 385
Query: 2006 SCALGAKCRLHH 2017
+C KC+L H
Sbjct: 386 NCG-NRKCQLPH 396
>gi|384498771|gb|EIE89262.1| hypothetical protein RO3G_13973 [Rhizopus delemar RA 99-880]
Length = 463
Score = 122 bits (305), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 103/198 (52%), Gaps = 20/198 (10%)
Query: 1831 LEKNAKKSYIPRRLVIGNDEYVRIGNGNQLIRDPK------RRARVLASEKVRWSLHTAR 1884
L +NA K Y+ R+ + + IR P+ R++ VL S + R
Sbjct: 135 LIQNAPK-YLVRKTIKSKRRLMNNSKNKVFIRGPEGYIRQGRKSLVLKSNQTR------- 186
Query: 1885 LRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPE 1944
+K YC F+TR+G+C + +C + HD + A+C +FL+G C+ + C L+H
Sbjct: 187 ---QKKPTYCGFYTRYGRC-PNGDRCLFRHDRHRRAICPRFLQGKCTKAACSLSHTPNDH 242
Query: 1945 RMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKA 2003
MP C +F +G C +NC Y HV VNP + C+ F ++GYC G C +KH +VCP F
Sbjct: 243 IMPHCVHFQKGHCAKENCLYAHVRVNPESPVCKPFAMEGYCPRGLGCDEKHIHVCPEFAE 302
Query: 2004 TGSCALGAKCRLHHPKSR 2021
TG C+ A CRL H R
Sbjct: 303 TGKCS-NANCRLPHVAKR 319
>gi|425765784|gb|EKV04432.1| CCCH zinc finger protein [Penicillium digitatum PHI26]
gi|425783910|gb|EKV21726.1| CCCH zinc finger protein [Penicillium digitatum Pd1]
Length = 459
Score = 121 bits (304), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 116/242 (47%), Gaps = 32/242 (13%)
Query: 1779 GAESFASETKIRIRSCRERIFRIGSVRYKMDSSRRTLQRISDDSSPCAAGPTLEKNAKKS 1838
G ++ R+ + ++ RI S + S R L I D P KN
Sbjct: 175 GHHILVNDVAFRVANGGSKLIRISSACSRRSSPRIGLPFIDD--------PRTAKN---- 222
Query: 1839 YIPRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFT 1898
P+R+ + + +VR NGN R +A +K HT + ++ + C+ FT
Sbjct: 223 -TPKRVTVADVSFVRSKNGNL------HRLGAVAMKKN----HTVK----KRDELCKRFT 267
Query: 1899 RFGKCNKDNGKCPYIHDPSKIAVCTKFLK-GLCS-NSDCKLTHKVIPERMPDCSYFLQGL 1956
G C K C ++HDPSK+A+C FL+ G C+ S C L+H+ P R P C +FL+G
Sbjct: 268 TTGTCYK-GPTCQFVHDPSKVAMCKDFLQTGQCAAGSSCDLSHEPSPHRSPTCMHFLRGR 326
Query: 1957 CTNKNCPYRHVHVNPNASTCEGFLK-GYCADGDECRKKHSYVCPTFKATGSCALGAKCRL 2015
C N C Y HV V P A C F GYC G+ C +KH + CP + TG+C +C+L
Sbjct: 327 CANPECRYAHVRVTPGAPVCRAFATLGYCEKGEACEEKHVHECPDYANTGACH-KKRCQL 385
Query: 2016 HH 2017
H
Sbjct: 386 PH 387
>gi|240275598|gb|EER39112.1| CCCH zinc finger protein [Ajellomyces capsulatus H143]
Length = 454
Score = 121 bits (303), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 101/180 (56%), Gaps = 18/180 (10%)
Query: 1841 PRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRF 1900
P+++ IG +VR GN R V++ +K + +K + C+ FT
Sbjct: 214 PKKVNIGGVNFVRSKKGNL-----HRLGSVVSRKKTG--------TVKKKNERCKRFTST 260
Query: 1901 GKCNKDNGKCPYIHDPSKIAVCTKFLK-GLCS-NSDCKLTHKVIPERMPDCSYFLQGLCT 1958
G C K CPYIHDP+K+A+C +FL+ G C+ S C L+H+ ER P C +FL+G C+
Sbjct: 261 GSCFK-GPNCPYIHDPNKVAICKEFLQTGKCAAGSACDLSHESSAERSPSCLHFLRGRCS 319
Query: 1959 NKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
N +C Y HV VNP A C F + GYC+ G+ C ++H + CP + TG+C KC+L H
Sbjct: 320 NPSCRYAHVRVNPGAPVCHDFAILGYCSKGEICDQRHVHECPDYANTGNCG-NRKCQLPH 378
>gi|225561989|gb|EEH10269.1| CCCH zinc finger protein [Ajellomyces capsulatus G186AR]
Length = 491
Score = 121 bits (303), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 101/180 (56%), Gaps = 18/180 (10%)
Query: 1841 PRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRF 1900
P+++ IG +VR GN R V++ +K + +K + C+ FT
Sbjct: 251 PKKVNIGGVNFVRSKKGNL-----HRLGSVVSRKKTG--------TVKKKNERCKRFTST 297
Query: 1901 GKCNKDNGKCPYIHDPSKIAVCTKFLK-GLCS-NSDCKLTHKVIPERMPDCSYFLQGLCT 1958
G C K CPYIHDP+K+A+C +FL+ G C+ S C L+H+ ER P C +FL+G C+
Sbjct: 298 GSCFK-GPNCPYIHDPNKVAICKEFLQTGKCAAGSACDLSHEPSAERSPSCLHFLRGRCS 356
Query: 1959 NKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
N +C Y HV VNP A C F + GYC+ G+ C ++H + CP + TG+C KC+L H
Sbjct: 357 NPSCRYAHVRVNPGAPVCHDFAILGYCSKGEICDQRHVHECPDYANTGNCG-NRKCQLPH 415
>gi|195588769|ref|XP_002084130.1| GD12982 [Drosophila simulans]
gi|194196139|gb|EDX09715.1| GD12982 [Drosophila simulans]
Length = 597
Score = 121 bits (303), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 86/172 (50%), Gaps = 2/172 (1%)
Query: 1840 IPRRLVIGNDEYVRIGNG-NQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFT 1898
I RR+ IG YV N +R +R + SL L + C F
Sbjct: 319 ILRRIDIGGLTYVASPKALNVFVRTSNHVSRAHLITAKQRSLTLLNKSLVKTNVPCAIFQ 378
Query: 1899 RFGKC-NKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLC 1957
+ GKC GKC +HD ++A+C FL+G C+ +C L+H V E+MP C Y+L+G+C
Sbjct: 379 KLGKCVAYSRGKCRKLHDKRQVAICVSFLRGECTKPECLLSHNVTLEKMPVCRYYLRGVC 438
Query: 1958 TNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCAL 2009
++CPY H ++ C F++GYC EC K+H + CP + G C L
Sbjct: 439 VREDCPYLHKKLSSKTEICIDFVRGYCPLAAECNKRHEFACPELERKGKCEL 490
>gi|66815629|ref|XP_641831.1| hypothetical protein DDB_G0279181 [Dictyostelium discoideum AX4]
gi|60469873|gb|EAL67859.1| hypothetical protein DDB_G0279181 [Dictyostelium discoideum AX4]
Length = 611
Score = 120 bits (302), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 66/105 (62%), Gaps = 1/105 (0%)
Query: 1892 KYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSY 1951
+YC FF RFGKCN N C Y H+P ++ +C KF+ G C + DCKL H + + MP C
Sbjct: 363 QYCLFFNRFGKCNNGND-CRYEHEPKRVRICPKFIAGNCDDPDCKLQHSLDLDLMPICHL 421
Query: 1952 FLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSY 1996
FL +CTN NCPY HV+++ + C F+ GYC G +C KH+Y
Sbjct: 422 FLNRMCTNDNCPYLHVNLSKDTEVCPDFISGYCPKGSKCELKHTY 466
>gi|242820392|ref|XP_002487501.1| CCCH zinc finger protein [Talaromyces stipitatus ATCC 10500]
gi|218713966|gb|EED13390.1| CCCH zinc finger protein [Talaromyces stipitatus ATCC 10500]
Length = 438
Score = 120 bits (302), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 96/188 (51%), Gaps = 20/188 (10%)
Query: 1833 KNAKKSYIPRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRK 1892
KNA + P+++V+G +VR GN R V+A K L
Sbjct: 192 KNANAT--PKKVVVGGVTFVRSKKGNL-----HRLGAVVAKRKPSKIKKKNEL------- 237
Query: 1893 YCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLK-GLCSNSD-CKLTHKVIPERMPDCS 1950
C+ F+R G C K CPYIHD +K+++C FL+ G C + D C L+H+ P R P C
Sbjct: 238 -CKRFSRTGSCYK-GPDCPYIHDANKVSICKDFLQTGKCPSGDSCDLSHEPSPHRSPVCV 295
Query: 1951 YFLQGLCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCAL 2009
+FL+G C+N C Y HV V P A C F + GYC G EC +H Y CP + TGSC
Sbjct: 296 HFLRGRCSNPECRYTHVRVTPGAPVCRAFAILGYCEKGAECTDRHVYECPDYANTGSCK- 354
Query: 2010 GAKCRLHH 2017
KC L H
Sbjct: 355 KKKCTLPH 362
>gi|121719912|ref|XP_001276654.1| CCCH zinc finger protein [Aspergillus clavatus NRRL 1]
gi|119404866|gb|EAW15228.1| CCCH zinc finger protein [Aspergillus clavatus NRRL 1]
Length = 452
Score = 120 bits (301), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 109/223 (48%), Gaps = 30/223 (13%)
Query: 1798 IFRIGSVRYKMDSSRRTLQRISDDSSPCAAGPTLEKNAKKSYIPRRLVIGNDEYVRIGNG 1857
+ + + +++ L R+SDD + + P+++ + +VR NG
Sbjct: 186 LVYLNDIPFRISKGGSKLVRVSDDPN------------TANITPKKVTVAGVVFVRSKNG 233
Query: 1858 NQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPS 1917
N R V + K A +R +K + C+ FT G C K CPYIHDP+
Sbjct: 234 NL-----HRLGAVTSKRK------PAAVR--KKNELCKRFTSTGTCVK-GPYCPYIHDPN 279
Query: 1918 KIAVCTKFLK-GLCSNS-DCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNAST 1975
K+A+C FL+ G CS DC L+H+ P R P C +FL+ C+N +C Y HV V P A
Sbjct: 280 KVAICKDFLQTGTCSAGLDCDLSHESSPHRSPACVHFLRNRCSNPDCRYSHVRVTPGAPV 339
Query: 1976 CEGFLK-GYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
C F GYC G EC ++H + CP + +G C +CRL H
Sbjct: 340 CRAFATLGYCEKGAECEERHVHECPDYANSGVCH-KKRCRLPH 381
>gi|328701067|ref|XP_001949036.2| PREDICTED: hypothetical protein LOC100162254 [Acyrthosiphon pisum]
Length = 715
Score = 120 bits (301), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 76/140 (54%), Gaps = 1/140 (0%)
Query: 1879 SLHTARLRLARKRKYCQFFTRFGKCNK-DNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKL 1937
+L R + ++ C F RFG C+K D G+C H I +CTKFL G CS +C L
Sbjct: 519 TLQRLRSKKTLTKQLCLVFNRFGVCSKSDQGECDKRHYKKYITLCTKFLTGECSRDNCTL 578
Query: 1938 THKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYV 1997
+H ++ E++P C ++L +C NCP+ H + + N C+ FL G C G +C KKH +
Sbjct: 579 SHNIVEEKIPFCKHYLNSVCVQLNCPFLHEYRSKNTPICKNFLHGSCNWGKKCPKKHLDL 638
Query: 1998 CPTFKATGSCALGAKCRLHH 2017
CP F+ C G KC H
Sbjct: 639 CPIFETKNECPHGQKCLYPH 658
>gi|380476569|emb|CCF44644.1| hypothetical protein CH063_13974 [Colletotrichum higginsianum]
Length = 431
Score = 120 bits (301), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 109/220 (49%), Gaps = 31/220 (14%)
Query: 1801 IGSVRYKMDSSRRTLQRISDDSSPCAAGPTLEKNAKKSYIPRRLVIGNDEYVRIGNGNQL 1860
I +R+++ S L ++S D P +A P+ +G ++ R GN
Sbjct: 181 IQGIRFRVAHSGSKLIKVSGDLHPVSA------------TPKVAFVGGVKFHRSKTGNLY 228
Query: 1861 IRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIA 1920
RA VL +++ + + + C F+ G C K C Y+HD S++A
Sbjct: 229 ------RAGVLEAQR--------QTSVKKLDVPCSMFSLTGSCAKGPA-CRYMHDASRVA 273
Query: 1921 VCTKFL-KGLCSNSD-CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEG 1978
VC + L KG C+N + C L+H + P+R P C +F++G C N NCPY H V+P A C
Sbjct: 274 VCRELLHKGNCANGESCDLSHDLTPQRTPTCVHFIKGNCANPNCPYAHSSVSPGALVCRS 333
Query: 1979 F-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
F + GYC GD+C ++H + CP F TG C C+L H
Sbjct: 334 FGMYGYCDKGDKCEERHVFECPDFSNTGKCRRKG-CKLLH 372
>gi|24660958|ref|NP_648230.1| ZC3H3 [Drosophila melanogaster]
gi|23093913|gb|AAF50410.2| ZC3H3 [Drosophila melanogaster]
gi|33589526|gb|AAQ22530.1| LD15332p [Drosophila melanogaster]
Length = 597
Score = 120 bits (301), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 106/220 (48%), Gaps = 8/220 (3%)
Query: 1792 RSCRERIFRIGSVRYKMDSSRRTLQRISDDSSPCAAGPTLEKNAKKSYIPRRLVIGNDEY 1851
R+ R + ++ +D S L R+S S+ G T + + +S + RR+ IG Y
Sbjct: 277 RTLSGRTLFVSGNKFILDPSGCRLTRVSTSST----GAT-QSSVNRSIL-RRIDIGGLTY 330
Query: 1852 VRIGNG-NQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRFGKC-NKDNGK 1909
V N +R +R + SL L + C F + GKC GK
Sbjct: 331 VASPKALNVFVRTSNHVSRAHLITAKQRSLTLLNKSLVKTNVPCAIFQKLGKCVAHSRGK 390
Query: 1910 CPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHV 1969
C +HD ++A+C FL+G C+ C L+H V E+MP C Y+L+G+C ++CPY H +
Sbjct: 391 CRKLHDKRQVAICVSFLRGECTKPKCLLSHNVTLEKMPVCRYYLRGVCVREDCPYLHKKL 450
Query: 1970 NPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCAL 2009
+ C F++GYC EC K+H + CP + G C L
Sbjct: 451 SSKTEICIDFVRGYCPLAAECNKRHEFSCPELERKGKCEL 490
>gi|326470091|gb|EGD94100.1| CCCH zinc finger protein [Trichophyton tonsurans CBS 112818]
Length = 444
Score = 120 bits (300), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 97/185 (52%), Gaps = 18/185 (9%)
Query: 1836 KKSYIPRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQ 1895
K + P+R+ +G +VR GN L R L + + + R + C+
Sbjct: 203 KANVTPKRVKVGGVTFVRSKRGN-LHR--------LGAVVSKKKPGKVKKR----NELCK 249
Query: 1896 FFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLK-GLC-SNSDCKLTHKVIPERMPDCSYFL 1953
FT G C K CPY+HDP+K+A+C FL+ G C + C L+H PER P C +FL
Sbjct: 250 RFTSTGTCFK-GPTCPYVHDPNKVAICKDFLQTGKCDAGVACDLSHDPSPERSPACLHFL 308
Query: 1954 QGLCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAK 2012
+G CTN +C Y HVH+ P AS C F + GYC+ G C +H + CP + TG+C K
Sbjct: 309 RGRCTNPSCRYTHVHITPGASVCRDFAILGYCSKGASCEGRHVHECPDYANTGNCG-NKK 367
Query: 2013 CRLHH 2017
C L H
Sbjct: 368 CPLPH 372
>gi|326482641|gb|EGE06651.1| CCCH zinc finger protein [Trichophyton equinum CBS 127.97]
Length = 444
Score = 120 bits (300), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 97/185 (52%), Gaps = 18/185 (9%)
Query: 1836 KKSYIPRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQ 1895
K + P+R+ +G +VR GN L R L + + + R + C+
Sbjct: 203 KANVTPKRVKVGGVTFVRSKRGN-LHR--------LGAVVSKKKPGKVKKR----NELCK 249
Query: 1896 FFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLK-GLC-SNSDCKLTHKVIPERMPDCSYFL 1953
FT G C K CPY+HDP+K+A+C FL+ G C + C L+H PER P C +FL
Sbjct: 250 RFTSTGTCFK-GPTCPYVHDPNKVAICKDFLQTGKCDAGVACDLSHDPSPERSPACLHFL 308
Query: 1954 QGLCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAK 2012
+G CTN +C Y HVH+ P AS C F + GYC+ G C +H + CP + TG+C K
Sbjct: 309 RGRCTNPSCRYTHVHITPGASVCRDFAILGYCSKGASCEGRHVHECPDYANTGNCG-NKK 367
Query: 2013 CRLHH 2017
C L H
Sbjct: 368 CPLPH 372
>gi|406866037|gb|EKD19077.1| ccch zinc finger DNA-binding protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 415
Score = 120 bits (300), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 106/200 (53%), Gaps = 18/200 (9%)
Query: 1837 KSYIPRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQF 1896
K P+ ++ +++R NG+ L RD R + +K +A K C+
Sbjct: 182 KKATPKLAIVAGVKFLRSKNGH-LYRDSSLRLFRIDKQKA----------IA---KPCRQ 227
Query: 1897 FTRFGKCNKDNGKCPYIHDPSKIAVCTKFLK-GLCSNSD-CKLTHKVIPERMPDCSYFLQ 1954
F+ G C+K CP+IHDP K+AVC F+K G C + D C L+H++ P+RMP C +FL+
Sbjct: 228 FSITGSCSK-GPDCPFIHDPLKVAVCHTFVKTGECPSGDSCDLSHELTPQRMPACMHFLR 286
Query: 1955 GLCTNKNCPYRHVHVNPNASTCEGFLK-GYCADGDECRKKHSYVCPTFKATGSCALGAKC 2013
G C NC Y HV V+P A C+ F GYC G C ++H CP F TG+C +
Sbjct: 287 GNCNKANCRYSHVRVSPTALVCKPFGNYGYCEKGLSCSERHVNECPAFSNTGTCPVTGCQ 346
Query: 2014 RLHHPKSRSNGKKSRRSRKP 2033
R H K+ + K+ R+ +P
Sbjct: 347 RPHRHKASNMRAKNARAEEP 366
>gi|145253020|ref|XP_001398023.1| CCCH zinc finger protein [Aspergillus niger CBS 513.88]
gi|134083581|emb|CAL00496.1| unnamed protein product [Aspergillus niger]
Length = 452
Score = 119 bits (299), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 92/180 (51%), Gaps = 18/180 (10%)
Query: 1841 PRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRF 1900
P+R+ + +VR NGN R V + K + + +K CQ FT
Sbjct: 216 PKRVTVAGVAFVRSKNGNL-----HRLGAVTSKRKP--------MTVKKKNALCQRFTTT 262
Query: 1901 GKCNKDNGKCPYIHDPSKIAVCTKFLK-GLC-SNSDCKLTHKVIPERMPDCSYFLQGLCT 1958
G C K CPYIHDP+K+A+C FL+ G C + C L+H+ P R P C +FL+G C+
Sbjct: 263 GSCYK-GPTCPYIHDPNKVAMCKDFLQTGQCNAGISCDLSHEPSPHRSPACVHFLRGRCS 321
Query: 1959 NKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
N C Y HV V P A C F + GYC G EC ++H + CP + G C +CRL H
Sbjct: 322 NPECRYAHVRVTPGAPVCRDFAVLGYCEKGAECDQRHVHECPDYANEGVCN-KKRCRLPH 380
>gi|350633102|gb|EHA21468.1| hypothetical protein ASPNIDRAFT_193651 [Aspergillus niger ATCC 1015]
Length = 385
Score = 119 bits (299), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 92/180 (51%), Gaps = 18/180 (10%)
Query: 1841 PRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRF 1900
P+R+ + +VR NGN R V + K + + +K CQ FT
Sbjct: 149 PKRVTVAGVAFVRSKNGNL-----HRLGAVTSKRKP--------MTVKKKNALCQRFTTT 195
Query: 1901 GKCNKDNGKCPYIHDPSKIAVCTKFLK-GLC-SNSDCKLTHKVIPERMPDCSYFLQGLCT 1958
G C K CPYIHDP+K+A+C FL+ G C + C L+H+ P R P C +FL+G C+
Sbjct: 196 GSCYK-GPTCPYIHDPNKVAMCKDFLQTGQCNAGISCDLSHEPSPHRSPACVHFLRGRCS 254
Query: 1959 NKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
N C Y HV V P A C F + GYC G EC ++H + CP + G C +CRL H
Sbjct: 255 NPECRYAHVRVTPGAPVCRDFAVLGYCEKGAECDQRHVHECPDYANEGVCN-KKRCRLPH 313
>gi|440911947|gb|ELR61564.1| Zinc finger CCCH domain-containing protein 3 [Bos grunniens mutus]
Length = 948
Score = 119 bits (298), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 70/109 (64%), Gaps = 5/109 (4%)
Query: 1911 PYIHDPSKIAVCTKFLKGLCSNSD--CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVH 1968
P + DP + +F++G C +D C +H V E+MP CSYFL+G+C+N +CPY HV+
Sbjct: 694 PQLGDPPCV---RRFVRGTCKKTDGTCPFSHHVSKEKMPVCSYFLKGICSNSSCPYSHVY 750
Query: 1969 VNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
V+ A C FLKGYC G +C+KKH+ +CP F G C GA+C+L H
Sbjct: 751 VSRKAEVCTDFLKGYCPLGAKCKKKHTLLCPDFSRQGVCPRGAQCQLPH 799
>gi|327298047|ref|XP_003233717.1| CCCH zinc finger protein [Trichophyton rubrum CBS 118892]
gi|326463895|gb|EGD89348.1| CCCH zinc finger protein [Trichophyton rubrum CBS 118892]
Length = 444
Score = 119 bits (298), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 96/185 (51%), Gaps = 18/185 (9%)
Query: 1836 KKSYIPRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQ 1895
K + P+R+ +G +VR GN L R L + + + R + C+
Sbjct: 203 KANVTPKRVKVGGVTFVRSKRGN-LHR--------LGAVVSKKKPEKVKKR----NELCK 249
Query: 1896 FFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLK-GLC-SNSDCKLTHKVIPERMPDCSYFL 1953
FT G C K CPY+HDP+K+A+C FL+ G C + C L+H PER P C +FL
Sbjct: 250 RFTSTGTCFK-GPTCPYVHDPNKVAICKDFLQTGKCDAGVACDLSHDPCPERSPACLHFL 308
Query: 1954 QGLCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAK 2012
+G CTN +C Y HVH+ P A C F + GYC+ G C +H + CP + TG+C K
Sbjct: 309 RGRCTNPSCRYTHVHITPGAPVCRDFAILGYCSKGASCEGRHVHECPDYANTGNCG-NKK 367
Query: 2013 CRLHH 2017
C L H
Sbjct: 368 CPLPH 372
>gi|327355620|gb|EGE84477.1| CCCH zinc finger protein [Ajellomyces dermatitidis ATCC 18188]
Length = 453
Score = 119 bits (297), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 100/180 (55%), Gaps = 18/180 (10%)
Query: 1841 PRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRF 1900
P+++ IG +VR GN R V++ +K + +K + C+ FT
Sbjct: 214 PKKVNIGGVNFVRSKKGNL-----HRLGSVVSRKKTGA--------VKKKNELCKRFTST 260
Query: 1901 GKCNKDNGKCPYIHDPSKIAVCTKFLK-GLC-SNSDCKLTHKVIPERMPDCSYFLQGLCT 1958
G C K C YIHDP K+A+C +FL+ G C + C L+H+ ER P C +FL+G C+
Sbjct: 261 GSCFKGP-NCTYIHDPHKVAICKEFLQTGKCVAGLACDLSHEPSAERSPSCLHFLRGRCS 319
Query: 1959 NKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
N +C Y HV VNP A C F + GYC++G+ C ++H++ CP + TG+C KC+L H
Sbjct: 320 NPSCRYAHVRVNPGAPVCRDFAILGYCSNGETCDQRHAHECPDYANTGNCG-NRKCQLPH 378
>gi|195171361|ref|XP_002026475.1| GL15569 [Drosophila persimilis]
gi|194111381|gb|EDW33424.1| GL15569 [Drosophila persimilis]
Length = 608
Score = 118 bits (296), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 93/197 (47%), Gaps = 24/197 (12%)
Query: 1842 RRLVIGNDEYVRIG-NGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRF 1900
RR+ IG YV N IR +R + SL L + C + +
Sbjct: 309 RRIDIGGLTYVASSKTKNVFIRTTNHVSRAHLITARQRSLTLLNKSLVKTNVPCAIYQKL 368
Query: 1901 GKC-NKDNGKCPYIHDPSKIAVC---------------------TKFLKGLCSNSDCKLT 1938
GKC GKC +HD ++ +C +FL+G C+ SDC L+
Sbjct: 369 GKCVAHSRGKCRKLHDKRQVTICPRLVPQPCEERLFDGVLSGDFKRFLRGECTKSDCLLS 428
Query: 1939 HKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVC 1998
H V E+MP C Y+L+G+C ++CPY H ++ N C F++GYC+ EC K+H + C
Sbjct: 429 HNVTLEKMPVCRYYLRGVCVREDCPYLHKKLSRNTEICIDFVRGYCSLAAECNKRHEFAC 488
Query: 1999 PTFKATGSCALGAKCRL 2015
P + G+C L AKCR
Sbjct: 489 PELERKGTCEL-AKCRF 504
>gi|226291059|gb|EEH46487.1| CCCH zinc finger protein [Paracoccidioides brasiliensis Pb18]
Length = 516
Score = 118 bits (295), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 81/136 (59%), Gaps = 5/136 (3%)
Query: 1885 LRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLK-GLC-SNSDCKLTHKVI 1942
+ + +K + C+ FT G C K CPYIHDP K+A+C +FL+ G C + C L+H
Sbjct: 258 MPIKKKVELCKRFTSTGSCFK-GPNCPYIHDPHKVAICKEFLQTGKCPAGLACDLSHDPS 316
Query: 1943 PERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTF 2001
PER P C +FL+G C+N C Y HV VNP A C F + GYC GD C ++H + CP +
Sbjct: 317 PERSPACLHFLRGRCSNPLCRYAHVRVNPGAPVCRDFAILGYCIKGDTCDQRHVHECPDY 376
Query: 2002 KATGSCALGAKCRLHH 2017
TG+C KC+L H
Sbjct: 377 ANTGNCG-NRKCQLPH 391
>gi|310790674|gb|EFQ26207.1| hypothetical protein GLRG_01351 [Glomerella graminicola M1.001]
Length = 432
Score = 117 bits (293), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 122/262 (46%), Gaps = 35/262 (13%)
Query: 1746 SLKWSKSIENRSKKVNEEATLAVAAVEKKRQENGAESFASETKIRIRSCRERIFRIGSVR 1805
+++ S+ +NR + +E++ LA G ++ T + I +R
Sbjct: 132 AIEASRQRKNRQQDAHEQSQLA-----NHFHRYGGQARMPPTPTNATATGNHEVEIQGIR 186
Query: 1806 YKMDSSRRTLQRISDDSSPCAAGPTLEKNAKKSYIPRRLVIGNDEYVRIGNGNQLIRDPK 1865
+++ S L ++S D P +A P+ +G ++ R GN
Sbjct: 187 FRVAHSGSKLIKVSGDLHPVSA------------TPKVAFVGGVKFHRSKTGNLY----- 229
Query: 1866 RRARVLASEKVRWSLHTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKF 1925
RA VL +++ + + C F+ G C K C Y+HD S++AVC +
Sbjct: 230 -RAGVLKAQRQNG--------VKKVDVPCSMFSLTGSCAKGPA-CRYVHDASRVAVCREL 279
Query: 1926 L-KGLCSNSD-CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGF-LKG 1982
L KG C+N + C L+H + P+R P C +F++G C N NCPY H V+P A C F + G
Sbjct: 280 LHKGNCANGESCDLSHDLTPQRTPTCVHFIKGNCANPNCPYAHSSVSPGALVCRSFGMYG 339
Query: 1983 YCADGDECRKKHSYVCPTFKAT 2004
YC GDEC ++H + CP F T
Sbjct: 340 YCDKGDECEERHVFECPDFSNT 361
>gi|440634688|gb|ELR04607.1| hypothetical protein GMDG_06889 [Geomyces destructans 20631-21]
Length = 442
Score = 117 bits (293), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 103/204 (50%), Gaps = 20/204 (9%)
Query: 1817 RISDDSSPCAAGPTLEKNAKKSYIPRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKV 1876
R+ D S A E AK P+ +G + R NGN R+ +L +++
Sbjct: 194 RVMKDGSKLAKVAGDENTAK--LTPKSATVGGVRFYRSKNGNLY------RSGILKAQRK 245
Query: 1877 RWSLHTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLK-GLCSNSD- 1934
++ + + C+ F+ G C K +C Y HDP+K+A+C FL+ G C+ SD
Sbjct: 246 PAAIK-------KIDEPCRLFSTTGVCPK-GPRCRYTHDPTKVAICKDFLQTGTCAASDS 297
Query: 1935 CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKK 1993
C L+H+ PER P C +F +G C N+NC Y HV V+ +A C F + GYC G EC ++
Sbjct: 298 CDLSHEATPERTPACLHFARGNCANENCRYAHVRVSASAPVCRAFAVYGYCERGAECDER 357
Query: 1994 HSYVCPTFKATGSCALGAKCRLHH 2017
H CP F TG C C+L H
Sbjct: 358 HVVECPEFSRTGECKTKG-CKLPH 380
>gi|119484620|ref|XP_001262089.1| CCCH zinc finger protein [Neosartorya fischeri NRRL 181]
gi|119410245|gb|EAW20192.1| CCCH zinc finger protein [Neosartorya fischeri NRRL 181]
Length = 452
Score = 117 bits (292), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 89/276 (32%), Positives = 133/276 (48%), Gaps = 35/276 (12%)
Query: 1750 SKSIEN-RSKKVNEEATLAVAAVEKKRQENG----AESFASETKIRIRSCRERIFRIGSV 1804
+K++E R K ++A + A V + Q G A + AS+ + E + +
Sbjct: 133 AKAMEQTRKAKAEKKARIEQAKVLRYAQGFGRPHHATTVASQVSATTQPHGEYQVYLNDI 192
Query: 1805 RYKMDSSRRTLQRISDDSSPCAAGPTLEKNAKKSYIPRRLVIGNDEYVRIGNGNQLIRDP 1864
+K+ L R+SDD P A T P+++ + +VR NGN
Sbjct: 193 PFKIAKGGSKLVRVSDD--PNTANIT----------PKKVTVAGVTFVRSKNGNL----- 235
Query: 1865 KRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTK 1924
R V + K TA + ++ + C+ FT G C K C +IHDP+K+A+C +
Sbjct: 236 HRLGAVTSKRKP-----TA---VKKRNELCKRFTSTGACYK-GPSCLFIHDPNKVAICKE 286
Query: 1925 FLK-GLCS-NSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLK- 1981
FL+ G CS +C L+H+ P R P C +FL+ C+N +C Y HV V P A C F
Sbjct: 287 FLQTGNCSAGQNCDLSHEPSPHRSPVCVHFLRNRCSNPDCRYSHVRVTPGAPVCRDFANL 346
Query: 1982 GYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
GYC G EC ++H + CP + ATG C +CRL H
Sbjct: 347 GYCDKGAECEERHVHECPDYAATGVCN-KKRCRLPH 381
>gi|451849950|gb|EMD63253.1| hypothetical protein COCSADRAFT_38119 [Cochliobolus sativus ND90Pr]
Length = 319
Score = 116 bits (291), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 79/143 (55%), Gaps = 5/143 (3%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDPSKIAVCTK-FLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+ FT G C++ CPYIHDP + AVC + F K C + C L+HK P P C +
Sbjct: 125 CRTFTSAGVCSRHG--CPYIHDPDRQAVCKRWFYKDACPMGEQCSLSHKASPHNAPTCLH 182
Query: 1952 FLQGLCTNKNCPYRHVHVNPNASTCEGFLK-GYCADGDECRKKHSYVCPTFKATGSCALG 2010
F G C N C + H+ NP A CE F GYC GD+C + H++ CP+F TG+C G
Sbjct: 183 FQAGRCANDGCRFAHIRTNPAALNCEAFGSLGYCEKGDKCAELHAHECPSFANTGTCRYG 242
Query: 2011 AKCRLHHPKSRSNGKKSRRSRKP 2033
+CRL H + S +K+ R P
Sbjct: 243 DECRLGHVRRASRMRKTTRLSSP 265
>gi|340521957|gb|EGR52190.1| predicted protein [Trichoderma reesei QM6a]
Length = 410
Score = 116 bits (290), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 78/127 (61%), Gaps = 5/127 (3%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLK-GLCSNSD-CKLTHKVIPERMPDCSY 1951
C+ F+ G C K C YIHDP+K+A+C F+K G C N + C L+H++ PER+P+C +
Sbjct: 223 CKIFSTTGSCPKGPA-CRYIHDPNKVALCKDFMKDGKCPNGEACDLSHELTPERVPNCLH 281
Query: 1952 FLQGLCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALG 2010
+ +G C+ +CP+ H +P+A CE F GYC G EC +H + CP F TGSC +
Sbjct: 282 YAKGQCSRPDCPFTHSKASPSAPVCEAFGFCGYCDKGAECTNRHVFECPNFSNTGSCNIR 341
Query: 2011 AKCRLHH 2017
C+L H
Sbjct: 342 G-CKLLH 347
>gi|452825411|gb|EME32408.1| zinc finger CCCH-type containing 3 isoform 2 [Galdieria sulphuraria]
gi|452825412|gb|EME32409.1| zinc finger CCCH-type containing 3 isoform 1 [Galdieria sulphuraria]
Length = 318
Score = 116 bits (290), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 74/129 (57%), Gaps = 3/129 (2%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDC 1949
K + C F+TRFG C + +C +IHDP ++ VC +F+ G C N CKL H RMP C
Sbjct: 180 KSELCFFYTRFGLCT--DKQCRFIHDPERVFVCRRFISGSCQNPGCKLLHTREENRMPVC 237
Query: 1950 SYFLQGLCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCA 2008
FL GLC NCP+ HV++ N C+ F +G+C+ G C + H++ C F TG C+
Sbjct: 238 LRFLSGLCGKNNCPFVHVNIGKNPEICKDFVFRGFCSQGRLCCRLHTWDCVEFWKTGQCS 297
Query: 2009 LGAKCRLHH 2017
KC L H
Sbjct: 298 NFEKCPLRH 306
>gi|389632125|ref|XP_003713715.1| CCCH zinc finger protein [Magnaporthe oryzae 70-15]
gi|351646048|gb|EHA53908.1| CCCH zinc finger protein [Magnaporthe oryzae 70-15]
Length = 452
Score = 115 bits (289), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 106/220 (48%), Gaps = 31/220 (14%)
Query: 1801 IGSVRYKMDSSRRTLQRISDDSSPCAAGPTLEKNAKKSYIPRRLVIGNDEYVRIGNGNQL 1860
I +++ + + L +++D+++P A P++ V+G +++R NGN +
Sbjct: 195 IEGIKFHVAKNGSKLVKVADNNAPKA-------------TPKQAVVGGVKFLRSRNGNMV 241
Query: 1861 IRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIA 1920
D + R + VR + + C+ F+ G C K C Y HDP K+A
Sbjct: 242 RHDIVKAQR--QNGPVR-----------KVQTPCRMFSTTGSCTK-GPLCRYQHDPLKVA 287
Query: 1921 VCTKFL-KGLCSNSD-CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEG 1978
+C FL KG C D C L+H+ PER P C +F +G C N C Y HV V P + C
Sbjct: 288 ICKDFLLKGDCIGGDSCDLSHEPTPERTPACLHFAKGNCNNPQCRYTHVQVTPGSLVCRD 347
Query: 1979 F-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
F + GYC G C +H + CP F TG C + C+L H
Sbjct: 348 FGIYGYCNKGSNCEDRHVFECPDFSNTGHCKIKG-CKLTH 386
>gi|402087095|gb|EJT81993.1| CCCH zinc finger protein [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 442
Score = 115 bits (289), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 107/224 (47%), Gaps = 39/224 (17%)
Query: 1801 IGSVRYKMDSSRRTLQRISDDSSPCAAGPTLEKNAKKSYIPRRLVIGNDEYVRIGNGNQL 1860
+ +R+ + + L +I D+++P A P+ V+G ++ R NGN
Sbjct: 186 VDGIRFNVAKNGSKLVKIIDNNAPKA-------------TPKMAVVGGVKFYRSRNGNLY 232
Query: 1861 IRDPKRRARVLASEKVRWSLHTARLRLARKRKY---CQFFTRFGKCNKDNG-KCPYIHDP 1916
R + A+ R RK C+ F+ G C NG +C YIHDP
Sbjct: 233 ----------------RHGIVKAQRRSGTVRKVDTPCRMFSMTGSCT--NGPRCRYIHDP 274
Query: 1917 SKIAVCTKFL-KGLC-SNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNAS 1974
+K+A+C FL G C S C L+H++ ER P C ++ +G CTN +C Y H+ V P A
Sbjct: 275 AKVAICRDFLVTGDCVSGGSCDLSHELTDERTPACVHYAKGKCTNPDCRYAHMQVTPGAP 334
Query: 1975 TCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
C F + GYC+ G C ++H + CP F TG C C+L H
Sbjct: 335 VCRDFGMLGYCSKGANCDERHVFECPDFSNTGVCKTKG-CKLPH 377
>gi|115401542|ref|XP_001216359.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114190300|gb|EAU32000.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 464
Score = 115 bits (289), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 90/180 (50%), Gaps = 19/180 (10%)
Query: 1841 PRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRF 1900
P+R+ + +VR NGN R V + K HT +K + C+ FT
Sbjct: 225 PKRVTVAGVTFVRSKNGNL-----HRLGAVTSKRK-----HTQ----VKKNELCRRFTTT 270
Query: 1901 GKCNKDNGKCPYIHDPSKIAVCTKFLK-GLC-SNSDCKLTHKVIPERMPDCSYFLQGLCT 1958
G C K C YIHDP K+A+C FL+ G C + C L+H+ P R P C +FL+G C
Sbjct: 271 GTCYK-GPTCTYIHDPHKVAICKDFLQTGHCNAGISCDLSHEPSPHRSPTCMHFLRGRCA 329
Query: 1959 NKNCPYRHVHVNPNASTCEGFLK-GYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
N C Y H+ V P A C F GYC G EC ++H + CP + TG C +CRL H
Sbjct: 330 NPECRYAHIKVTPGAPVCRRFAHLGYCEKGAECDQRHVHECPDYANTGVCNK-KRCRLPH 388
>gi|330945477|ref|XP_003306565.1| hypothetical protein PTT_19741 [Pyrenophora teres f. teres 0-1]
gi|311315899|gb|EFQ85363.1| hypothetical protein PTT_19741 [Pyrenophora teres f. teres 0-1]
Length = 373
Score = 115 bits (289), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 76/132 (57%), Gaps = 6/132 (4%)
Query: 1889 RKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFL-KGLCS-NSDCKLTHKVIPERM 1946
+ + C FT G C+ G C Y+HDP+K+A C ++L KG C+ S C L+H + P
Sbjct: 170 KPKGLCSKFTSTGVCS---GICSYMHDPNKLAACKRWLFKGNCALGSLCPLSHDISPHNA 226
Query: 1947 PDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATG 2005
P C +F G+C N++C + HV +NP A CE F GYC GD C + H+ CPTF TG
Sbjct: 227 PTCIHFQGGMCNNESCRFAHVRINPAARNCEAFGTLGYCEKGDTCPEMHANECPTFANTG 286
Query: 2006 SCALGAKCRLHH 2017
C G KCR H
Sbjct: 287 ECPFGDKCRRGH 298
>gi|429857498|gb|ELA32362.1| ccch zinc finger protein [Colletotrichum gloeosporioides Nara gc5]
Length = 432
Score = 115 bits (289), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 127/277 (45%), Gaps = 25/277 (9%)
Query: 1750 SKSIE-NRSKKVNEEATLAVAAVEKKRQENGAESFASETKIRIRSCRERIFRIGSVRYKM 1808
+K+IE R KK+ + + + Q G + A T + I +RY++
Sbjct: 113 AKAIEATRQKKLLQREAREKSQLANHFQRYGGHASAPNTPTNTTAVGNHEIEIQGLRYRV 172
Query: 1809 DSSRRTLQRISDDS-SPCAAGPTLEKNAKK----SYIPRRLVIGNDEYVRIGNGNQLIRD 1863
++ L ++S S +P A ++ S P+ +G ++ R GN
Sbjct: 173 ANNGSKLVKVSGQSPTPSAPWALVDYYTGDLHPVSATPKVTYVGGVKFHRSKRGNLY--- 229
Query: 1864 PKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCT 1923
RA VL + + + + C F+ G C K C Y HD SK+AVC
Sbjct: 230 ---RAGVLRAHRHHG--------VKKVDVPCSMFSLTGSCAKGPA-CRYQHDASKVAVCR 277
Query: 1924 KFL-KGLCSNSD-CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGF-L 1980
+ L KG C++ + C L+H + P+R P C +F++G C N NCPY H V+P A C F +
Sbjct: 278 ELLHKGTCAHEESCDLSHDLTPQRTPTCVHFIKGNCANPNCPYAHSSVSPGALVCRSFGM 337
Query: 1981 KGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
GYC GD C ++H + CP F TG C C+L H
Sbjct: 338 YGYCDKGDNCEERHVFECPDFSNTGKCKTKG-CKLLH 373
>gi|402226360|gb|EJU06420.1| hypothetical protein DACRYDRAFT_113130 [Dacryopinax sp. DJM-731 SS1]
Length = 410
Score = 115 bits (288), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/134 (46%), Positives = 76/134 (56%), Gaps = 6/134 (4%)
Query: 1888 ARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERM 1946
R++K C FFTR G C + C Y HDP K+A+C K+LKG C N D C L+H+ P+RM
Sbjct: 165 GREKKQCPFFTRTGICTRGR-TCRYQHDPEKVAMCPKWLKGDCPNGDSCPLSHQPTPQRM 223
Query: 1947 PDCSYFLQ-GLCTNKN-CPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKA 2003
P C +F G C N + C Y HVH+ A C F + GYC G +C KKH CP F
Sbjct: 224 PFCVHFANAGRCKNGDSCMYPHVHLGATAGICRDFAVLGYCEKGADCDKKHVRECPDFAD 283
Query: 2004 TGSCALGAKCRLHH 2017
TG C CRL H
Sbjct: 284 TGVCK-NRHCRLPH 296
>gi|325180208|emb|CCA14609.1| hypothetical protein PPL_03164 [Albugo laibachii Nc14]
Length = 474
Score = 115 bits (288), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 75/138 (54%), Gaps = 23/138 (16%)
Query: 1879 SLHTARLRLAR----KRKYCQFFTRFGK------------------CNKDNGKCPYIHDP 1916
++H ARL A+ + +YC F+ RFG+ CNK N C YIHD
Sbjct: 231 AIHRARLEKAKQTLVRTEYCLFYNRFGQSISLTNFKIVQSISSIGCCNKKNA-CKYIHDS 289
Query: 1917 SKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTC 1976
K+AVC KFL G C N C L+HK +MP C FL+G CT ++C YRH+ V+ +A C
Sbjct: 290 RKVAVCPKFLIGSCDNPKCLLSHKHDQNKMPVCKLFLRGACTRESCKYRHIKVSSSADIC 349
Query: 1977 EGFLKGYCADGDECRKKH 1994
FLKGYC +C KH
Sbjct: 350 PAFLKGYCPLQSQCCLKH 367
>gi|212545719|ref|XP_002153013.1| CCCH zinc finger protein [Talaromyces marneffei ATCC 18224]
gi|210064533|gb|EEA18628.1| CCCH zinc finger protein [Talaromyces marneffei ATCC 18224]
Length = 442
Score = 115 bits (288), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 94/188 (50%), Gaps = 20/188 (10%)
Query: 1833 KNAKKSYIPRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRK 1892
KNA + P+++V+G +VR GN R V+A K L
Sbjct: 192 KNANAT--PKKVVVGGVTFVRSKKGNL-----HRLGAVVAKRKPSKIKKKNEL------- 237
Query: 1893 YCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLK-GLCSNSD-CKLTHKVIPERMPDCS 1950
C+ F+R G C K CPYIHD +K+A+C FL+ G C + D C L+H+ P R P C
Sbjct: 238 -CKRFSRTGSCYK-GPDCPYIHDANKVAICKDFLQTGKCRSGDSCDLSHEPSPHRSPVCV 295
Query: 1951 YFLQGLCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCAL 2009
+FL+G C+N C Y HV V P A C F + GYC EC +H Y CP + TG C
Sbjct: 296 HFLRGRCSNPECRYTHVRVTPGAPVCRDFAVLGYCEKAGECTDRHVYECPDYANTGVCK- 354
Query: 2010 GAKCRLHH 2017
KC L H
Sbjct: 355 KKKCTLPH 362
>gi|146324757|ref|XP_747350.2| CCCH zinc finger protein [Aspergillus fumigatus Af293]
gi|129556139|gb|EAL85312.2| CCCH zinc finger protein [Aspergillus fumigatus Af293]
gi|159123645|gb|EDP48764.1| CCCH zinc finger protein [Aspergillus fumigatus A1163]
Length = 452
Score = 115 bits (288), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 133/276 (48%), Gaps = 35/276 (12%)
Query: 1750 SKSIEN-RSKKVNEEATLAVAAVEKKRQENG----AESFASETKIRIRSCRERIFRIGSV 1804
+K++E R K ++A + A V + Q G A + AS+ + E + +
Sbjct: 133 AKAMEQTRKAKAEKKARIEQAKVLRYAQGFGRPHLATTAASQVSATTQPHGEYQVYLNDI 192
Query: 1805 RYKMDSSRRTLQRISDDSSPCAAGPTLEKNAKKSYIPRRLVIGNDEYVRIGNGNQLIRDP 1864
+K+ L R+SDD P A T P+++ + +VR NGN
Sbjct: 193 PFKIAKGGSKLVRVSDD--PNTANIT----------PKKVTVAGVTFVRSKNGNL----- 235
Query: 1865 KRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTK 1924
R V + K TA + ++ + C+ FT G C K C +IHDP+K+A+C +
Sbjct: 236 HRLGAVTSKRKP-----TA---VKKRNELCKRFTSTGACYK-GPSCLFIHDPNKVAICKE 286
Query: 1925 FLK-GLCS-NSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLK- 1981
FL+ G CS +C L+H+ P R P C +FL+ C+N +C Y HV V P A C F
Sbjct: 287 FLQTGNCSAGQNCDLSHEPSPHRSPVCVHFLRNRCSNPDCRYSHVRVTPGAPVCRDFANL 346
Query: 1982 GYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
GYC G EC ++H + CP + A+G C +CRL H
Sbjct: 347 GYCDKGAECEQRHVHECPDYAASGVCN-KKRCRLPH 381
>gi|213401925|ref|XP_002171735.1| mRNA 3'-end-processing protein YTH1 [Schizosaccharomyces japonicus
yFS275]
gi|211999782|gb|EEB05442.1| mRNA 3'-end-processing protein YTH1 [Schizosaccharomyces japonicus
yFS275]
Length = 380
Score = 115 bits (287), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 73/128 (57%), Gaps = 4/128 (3%)
Query: 1893 YCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
YC+++ G C K GKC Y+HDP+ VC +FL G C N + C L+H +R P C Y
Sbjct: 212 YCRYYNMVGYCAK-GGKCMYVHDPAHKYVCPRFLSGNCPNGEQCSLSHDRDEKRTPACRY 270
Query: 1952 FLQGLCTNKNCPYRHVHVNPNASTCEGFLK-GYCADGDECRKKHSYVCPTFKATGSCALG 2010
FL+G CTN C Y HVH N + C F + G C +G C+ KH C + G+C
Sbjct: 271 FLKGKCTNPVCRYAHVHYNESVPVCPDFSEYGMCENGLHCKMKHILKCTEYALKGACH-N 329
Query: 2011 AKCRLHHP 2018
AKCRL+HP
Sbjct: 330 AKCRLYHP 337
>gi|302414184|ref|XP_003004924.1| CCCH zinc finger protein [Verticillium albo-atrum VaMs.102]
gi|261355993|gb|EEY18421.1| CCCH zinc finger protein [Verticillium albo-atrum VaMs.102]
Length = 441
Score = 115 bits (287), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 74/127 (58%), Gaps = 5/127 (3%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFL-KGLCSNS-DCKLTHKVIPERMPDCSY 1951
C+ F+ G C K C YIHD SK+AVC FL KG C+N DC L+H + P+R P C +
Sbjct: 257 CRMFSSTGSCPK-GPTCRYIHDASKVAVCRDFLQKGKCANGEDCDLSHDLCPQRTPTCLH 315
Query: 1952 FLQGLCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALG 2010
F++G C N CPY H +V+P A C F L G+C G EC ++H CP F TG C
Sbjct: 316 FIKGNCANHECPYAHNNVSPGALVCRPFGLYGFCEAGQECTERHVSECPDFSNTGVCKTK 375
Query: 2011 AKCRLHH 2017
C+L H
Sbjct: 376 G-CKLLH 381
>gi|407929427|gb|EKG22257.1| Zinc finger CCCH-type protein [Macrophomina phaseolina MS6]
Length = 447
Score = 115 bits (287), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 98/188 (52%), Gaps = 15/188 (7%)
Query: 1843 RLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVR---WSLHTARLRLARKRKY------ 1893
R+ G + VRI N R ++ARV +R +L+ + L ++ K
Sbjct: 192 RVADGGSKLVRISNDPNTARATPKQARVGGVTFLRSKNGNLYRSGLIKTKQDKPIKKIDE 251
Query: 1894 -CQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFL-KGLCSNSD-CKLTHKVIPERMPDCS 1950
C FT G C K +C Y+HDP+K+A+C +L +G C+ D C L+H+ P R+P C
Sbjct: 252 PCPRFTTTGTCAK-GPQCRYVHDPNKVAICKDYLLRGNCALGDGCDLSHEPTPNRVPACL 310
Query: 1951 YFLQGLCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCAL 2009
+FL+G CTN NC Y H+ VNP+ C F GYC G +C ++H + CP + C
Sbjct: 311 HFLRGNCTNDNCRYAHIRVNPSGPVCHAFGALGYCEKGSDCTERHVFECPDYANHAVCR- 369
Query: 2010 GAKCRLHH 2017
KCRL H
Sbjct: 370 NPKCRLPH 377
>gi|58271608|ref|XP_572960.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21]
gi|134114766|ref|XP_773681.1| hypothetical protein CNBH1360 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256309|gb|EAL19034.1| hypothetical protein CNBH1360 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229219|gb|AAW45653.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 483
Score = 114 bits (286), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 109/231 (47%), Gaps = 44/231 (19%)
Query: 1797 RIFRIGSVRYKMDSSRRTLQRISDDSSPCAAGPTLEKNAKKSYI----PRRLVIGNDEYV 1852
R+F I V Y+ + + L+R SD P N + YI PR + + +Y
Sbjct: 176 RVF-IDGVTYEFNPGGKGLKRTSDYKQP---------NTLQWYIDSPKPRLVSVLGIKYR 225
Query: 1853 RIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRFGKCNKDNGKCPY 1912
NG+ L + + R+ + C +F++ G+C K + C
Sbjct: 226 FQPNGD---------------------LTLPKSNVPRRGQLCPYFSKTGRCRKGH-ICKA 263
Query: 1913 IHDPSKIAVCTKFLKGLCS-NSDCKLTHKVIPERMPDCSYFLQGL--CTNKNCPYRHVHV 1969
IHDP ++A C FL+G C C L+H+ P C+ F Q L CT NCPY HV V
Sbjct: 264 IHDPDRVAACPNFLRGRCELGPICPLSHRTTAHNTPSCTRF-QALSYCTRPNCPYPHVKV 322
Query: 1970 NPNASTCEGF-LKGYC--ADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
+ +A CE F G+C A+G EC HSY CP F +TG C GAKC+L H
Sbjct: 323 SNDAPICEDFAFTGWCDTAEG-ECPNLHSYDCPEFWSTGKCPRGAKCKLRH 372
>gi|330801806|ref|XP_003288914.1| hypothetical protein DICPUDRAFT_79693 [Dictyostelium purpureum]
gi|325081006|gb|EGC34538.1| hypothetical protein DICPUDRAFT_79693 [Dictyostelium purpureum]
Length = 594
Score = 114 bits (286), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 67/108 (62%), Gaps = 4/108 (3%)
Query: 1893 YCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGL-CSNSDCKLTHK--VIPERMPDC 1949
YC FFTRFGKCNK KC Y HDP ++ VCTKF+ C + +CKL H + E+MP C
Sbjct: 404 YCLFFTRFGKCNKGE-KCTYEHDPQRVRVCTKFISASGCDDVECKLRHPKDLDYEQMPIC 462
Query: 1950 SYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYV 1997
+L+G+C N CPY HV + + C FL GYC +G +C +H Y+
Sbjct: 463 HMYLRGVCMNDPCPYLHVKFSKDTEICPDFLLGYCPNGSKCNLQHIYI 510
>gi|171684565|ref|XP_001907224.1| hypothetical protein [Podospora anserina S mat+]
gi|170942243|emb|CAP67895.1| unnamed protein product [Podospora anserina S mat+]
Length = 428
Score = 114 bits (286), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 90/179 (50%), Gaps = 17/179 (9%)
Query: 1841 PRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRF 1900
PR V+G ++ R NGN R V+ +++ ++ + C+ F+
Sbjct: 200 PRMAVVGGVKFYRSKNGNLY------RHGVVKAQRQSGTVKKVNVP-------CKQFSMM 246
Query: 1901 GKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQGLCTN 1959
G C K +C Y HDP K+A+C FL G C N D C L+H PER P C ++ + CT
Sbjct: 247 GSCAK-GPQCRYTHDPHKVAICKDFLLGGCPNGDDCDLSHDPTPERTPACLHYARDSCTK 305
Query: 1960 KNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
+C Y HV V+ A C F GYC G EC ++H + CP F TG+C + C+L H
Sbjct: 306 SDCKYAHVKVSTAAPVCRSFGFYGYCEGGAECPERHVFECPDFSNTGTCKIRG-CKLPH 363
>gi|452001773|gb|EMD94232.1| hypothetical protein COCHEDRAFT_1020269 [Cochliobolus heterostrophus
C5]
Length = 319
Score = 114 bits (286), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 78/143 (54%), Gaps = 5/143 (3%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDPSKIAVCTK-FLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+ FT G C++ CPY+HDP K AVC + F K C + C L+H+ P P C +
Sbjct: 125 CRTFTSTGVCSRHG--CPYVHDPDKQAVCKRWFYKDACPMGEQCSLSHEASPHNAPTCLH 182
Query: 1952 FLQGLCTNKNCPYRHVHVNPNASTCEGFLK-GYCADGDECRKKHSYVCPTFKATGSCALG 2010
F G C N C + HV NP A CE F GYC GD+C + H++ CP+F TG+C G
Sbjct: 183 FQAGRCANDGCRFAHVRTNPAALNCEAFGNFGYCEKGDKCAELHAHECPSFANTGTCRYG 242
Query: 2011 AKCRLHHPKSRSNGKKSRRSRKP 2033
+CRL H + S +K R P
Sbjct: 243 DECRLGHVRRASRMRKPTRFSSP 265
>gi|405122367|gb|AFR97134.1| CCCH zinc finger protein [Cryptococcus neoformans var. grubii H99]
Length = 478
Score = 114 bits (285), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 109/231 (47%), Gaps = 44/231 (19%)
Query: 1797 RIFRIGSVRYKMDSSRRTLQRISDDSSPCAAGPTLEKNAKKSYI----PRRLVIGNDEYV 1852
R+F I V Y+ +S + L+R S+ P N + YI PR + + +Y
Sbjct: 176 RVF-IDGVTYEFNSGGKGLKRTSEYKQP---------NTLQWYIDSPKPRLVSVLGIKYR 225
Query: 1853 RIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRFGKCNKDNGKCPY 1912
NG+ L + + RK + C +F++ G+C K + C
Sbjct: 226 FQPNGD---------------------LTLPKSNVPRKGQLCPYFSKTGRCRKGH-ICKA 263
Query: 1913 IHDPSKIAVCTKFLKGLCS-NSDCKLTHKVIPERMPDCSYFLQGL--CTNKNCPYRHVHV 1969
IHDP ++A C FL+G C C L+H P C+ F Q L CT NCPY HV V
Sbjct: 264 IHDPDRVAACPNFLRGRCELGPICPLSHNPTAHNTPSCTRF-QALSYCTRPNCPYPHVKV 322
Query: 1970 NPNASTCEGF-LKGYC--ADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
+ +A CE F G+C A+G EC HSY CP F +TG C GAKC+L H
Sbjct: 323 SNDAPICEDFAFTGWCDTAEG-ECPNLHSYDCPEFWSTGKCPRGAKCKLRH 372
>gi|346974913|gb|EGY18365.1| CCCH zinc finger protein [Verticillium dahliae VdLs.17]
Length = 449
Score = 114 bits (284), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 112/233 (48%), Gaps = 26/233 (11%)
Query: 1795 RERIFRIGSVRYKMDSSRRTLQRISDDSS---PCAAGPTLEKNA----KKSYIPRRLVIG 1847
++ + I + +++ + L +++ SS P GPT S P+ V+G
Sbjct: 172 QDHVIDIQGISFRVICNGSKLVKVAGTSSRTSPPHLGPTCSHLPGDLHSASATPKVAVVG 231
Query: 1848 NDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRFGKCNKDN 1907
++ R NGN L R ++ H + + C+ F+ G C K
Sbjct: 232 GVQFRRSKNGN-LYRQ----------GVIKLHPHAG---VKKVNVPCRMFSSTGSCPKGP 277
Query: 1908 GKCPYIHDPSKIAVCTKFL-KGLCSNS-DCKLTHKVIPERMPDCSYFLQGLCTNKNCPYR 1965
C YIH+ SK+AVC FL KG C+N DC L+H + P+R P C +F++G C N CPY
Sbjct: 278 -NCRYIHNASKVAVCRDFLQKGKCANGEDCDLSHDLCPQRTPTCLHFIKGNCANHECPYA 336
Query: 1966 HVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
H +V+P A C F L G+C G EC ++H CP F TG C C+L H
Sbjct: 337 HNNVSPGALVCRPFGLYGFCEAGQECTERHVSECPDFSNTGVCKTKG-CKLLH 388
>gi|46107258|ref|XP_380688.1| hypothetical protein FG00512.1 [Gibberella zeae PH-1]
Length = 435
Score = 114 bits (284), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 1892 KYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLK-GLCSNSD-CKLTHKVIPERMPDC 1949
+ C+ F+ G C K +C YIHDPSK+A+C LK G C N + C L+H + PER P+C
Sbjct: 249 QLCKIFSTTGSCTK-GPRCRYIHDPSKVALCKNILKDGQCVNGELCDLSHDMTPERTPNC 307
Query: 1950 SYFLQGLCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCA 2008
+F +G C +CPY H P A C F GYC G +C ++H + CP F TG C
Sbjct: 308 LHFAKGHCAKDDCPYTHSRAPPAALVCRSFGFNGYCEKGADCTERHVFECPDFSNTGRCK 367
Query: 2009 LGAKCRLHH 2017
+ C+L H
Sbjct: 368 IKG-CKLPH 375
>gi|403420376|emb|CCM07076.1| predicted protein [Fibroporia radiculosa]
Length = 743
Score = 113 bits (283), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 96/196 (48%), Gaps = 22/196 (11%)
Query: 1841 PRRLVIGNDEYVRIGNG---NQLIRDPKRRARVLASEKVRWSLHTARLRLAR-------- 1889
PR+ G+ +Y R N N + PKR ++ +AS S +R R
Sbjct: 30 PRKHPPGH-QYTRARNNVYVNPNYQPPKRSSKFVASRAPHRSYKPKPIRPKRTINRRTLS 88
Query: 1890 KRKY----CQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNS--DCKLTHKVIP 1943
KRKY C F+ G CN+ C Y HDPSKIA+C FL G CSN+ C L+H P
Sbjct: 89 KRKYFNKPCPRFSTTGACNR-GLTCMYQHDPSKIAICWNFLHGNCSNTAESCGLSHDPTP 147
Query: 1944 ERMPDCSYFL-QGLCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTF 2001
ER P C +F G CT ++CP+ HV + C F + GYC G +C ++H CP F
Sbjct: 148 ERTPPCLHFANNGRCTREDCPFPHVRLGQRQGVCRDFAVFGYCGKGLDCERQHIRECPDF 207
Query: 2002 KATGSCALGAKCRLHH 2017
G C L C+L H
Sbjct: 208 AEKGKCTLKG-CKLPH 222
>gi|321261896|ref|XP_003195667.1| hypothetical protein CGB_H2160W [Cryptococcus gattii WM276]
gi|317462141|gb|ADV23880.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 496
Score = 113 bits (282), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 115/250 (46%), Gaps = 48/250 (19%)
Query: 1797 RIFRIGSVRYKMDSSRRTLQRISDDSSPCAAGPTLEKNAKKSYI----PRRLVIGNDEYV 1852
R+F I V Y+ + + L+R SD P N + YI P+ + + +Y
Sbjct: 179 RVF-IDGVTYEFNPGGKGLKRTSDYKQP---------NTLQWYIDSPKPKLVSVLGIKYR 228
Query: 1853 RIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRFGKCNKDNGKCPY 1912
NG+ L + + RK + C +F++ G+C K + C
Sbjct: 229 FQPNGD---------------------LTLPKSNVPRKGQLCPYFSKTGRCRKGH-ICKA 266
Query: 1913 IHDPSKIAVCTKFLKGLCS-NSDCKLTHKVIPERMPDCSYFLQGL--CTNKNCPYRHVHV 1969
IHDP ++A C FL+G C C L+H P C+ F Q L CT NCPY HV V
Sbjct: 267 IHDPDRVAACPNFLRGRCELGPICPLSHNPSAHNTPSCTRF-QALSYCTRPNCPYPHVKV 325
Query: 1970 NPNASTCEGF-LKGYC--ADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKK 2026
+ +A CE F G+C A+G EC HSY CP F +TG C GAKC+L H G
Sbjct: 326 SNDAPICEDFAFTGWCDTAEG-ECPYLHSYDCPEFWSTGKCPRGAKCKLRHTLRAEKG-- 382
Query: 2027 SRRSRKPKNT 2036
R+ KP+ T
Sbjct: 383 --RAAKPETT 390
>gi|345566349|gb|EGX49292.1| hypothetical protein AOL_s00078g325 [Arthrobotrys oligospora ATCC
24927]
Length = 208
Score = 113 bits (282), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 76/120 (63%), Gaps = 4/120 (3%)
Query: 1900 FGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQGLCT 1958
GKC + N CPY+HDP ++A+C KFL+ CS+ D C L+H P R+P C +FL+G C+
Sbjct: 13 LGKCVRGN-TCPYVHDPDRVAICPKFLQNNCSDGDSCDLSHIPNPHRVPACLHFLRGNCS 71
Query: 1959 NKNCPYRHVHVNPNASTCEGFLK-GYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
N++C Y HV VNP+A C F K GYC G +C KH + CP F A G C A C+L H
Sbjct: 72 NESCKYAHVRVNPSAPICRPFAKEGYCDKGADCLDKHVFECPDFDAKGVCNDKA-CKLPH 130
>gi|367042830|ref|XP_003651795.1| hypothetical protein THITE_2112476 [Thielavia terrestris NRRL 8126]
gi|346999057|gb|AEO65459.1| hypothetical protein THITE_2112476 [Thielavia terrestris NRRL 8126]
Length = 437
Score = 113 bits (282), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 106/225 (47%), Gaps = 33/225 (14%)
Query: 1832 EKNAKKSYIPRRLVIGNDEYVRIGNGNQL---IRDPKRRARVLASEKVRWSLHTARLRLA 1888
E N+ K+ P+ V+G + R NGN I +R++ V+ V
Sbjct: 194 ENNSAKA-TPKIAVVGGVRFYRSKNGNLYRHGIVKAQRQSGVVKKVNVP----------- 241
Query: 1889 RKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKG--LCSNSDCKLTHKVIPERM 1946
C+ F+ G C + +C Y+HDP K+A+C +FL+G S C L+H+ IPER
Sbjct: 242 -----CKQFSMTGSCTQ-GPRCRYVHDPHKVAICREFLQGGGCQSGEHCDLSHEPIPERT 295
Query: 1947 PDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATG 2005
P C +F + CT +C Y HV V+P A C F GYC G C +H + CP F TG
Sbjct: 296 PTCLHFARDSCTKPDCKYAHVKVSPAAPVCRDFGFYGYCEKGASCPDRHVFECPDFSNTG 355
Query: 2006 SCALGAKCRLHHPKSRSNGKKSRRSRKPKNTHGRYFGSMLVEDSE 2050
+C + C+L H + R S + GR SM ED E
Sbjct: 356 TCKIKG-CKLPH--------RERASVLRRGAGGRDLSSMEEEDKE 391
>gi|302507150|ref|XP_003015536.1| hypothetical protein ARB_05847 [Arthroderma benhamiae CBS 112371]
gi|291179104|gb|EFE34891.1| hypothetical protein ARB_05847 [Arthroderma benhamiae CBS 112371]
Length = 491
Score = 113 bits (282), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 68/111 (61%), Gaps = 4/111 (3%)
Query: 1910 CPYIHDPSKIAVCTKFLK-GLC-SNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHV 1967
CPY+HDP+K+A+C FL+ G C + C L+H PER P C +FL+G CTN +C Y HV
Sbjct: 310 CPYVHDPNKVAICKDFLQTGNCDAGVACDLSHDPCPERSPACLHFLRGRCTNPSCRYTHV 369
Query: 1968 HVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
H+ P A C F + GYC+ G C +H + CP + TG+C KC L H
Sbjct: 370 HITPGAPVCRDFAILGYCSKGASCEGRHVHECPDYANTGNCG-NKKCPLPH 419
>gi|302666419|ref|XP_003024809.1| hypothetical protein TRV_01025 [Trichophyton verrucosum HKI 0517]
gi|291188881|gb|EFE44198.1| hypothetical protein TRV_01025 [Trichophyton verrucosum HKI 0517]
Length = 472
Score = 113 bits (282), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 68/111 (61%), Gaps = 4/111 (3%)
Query: 1910 CPYIHDPSKIAVCTKFLK-GLC-SNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHV 1967
CPY+HDP+K+A+C FL+ G C + C L+H PER P C +FL+G CTN +C Y HV
Sbjct: 291 CPYVHDPNKVAICKDFLQTGNCDAGVACDLSHDPCPERSPACLHFLRGRCTNPSCRYTHV 350
Query: 1968 HVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
H+ P A C F + GYC+ G C +H + CP + TG+C KC L H
Sbjct: 351 HITPGAPVCRDFAILGYCSKGASCEGRHVHECPDYANTGNCG-NKKCPLPH 400
>gi|296818643|ref|XP_002849658.1| CCCH zinc finger protein [Arthroderma otae CBS 113480]
gi|238840111|gb|EEQ29773.1| CCCH zinc finger protein [Arthroderma otae CBS 113480]
Length = 448
Score = 112 bits (281), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 75/129 (58%), Gaps = 5/129 (3%)
Query: 1892 KYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLK-GLC-SNSDCKLTHKVIPERMPDC 1949
+ C+ FT G C K CPY+HDP+K+A+C FL+ G C + C L+H PER P C
Sbjct: 251 ELCKRFTSTGTCFK-GPTCPYLHDPNKVAICKDFLQTGNCDAGLACDLSHDPSPERSPAC 309
Query: 1950 SYFLQGLCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCA 2008
+FL+G CTN +C Y H + P A C F + GYC+ G C ++H + CP + TG+C
Sbjct: 310 LHFLRGRCTNPSCRYTHARITPGAPVCRDFAILGYCSKGATCEERHVHECPDYANTGNCG 369
Query: 2009 LGAKCRLHH 2017
KC L H
Sbjct: 370 -NKKCSLPH 377
>gi|380096166|emb|CCC06213.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 476
Score = 112 bits (281), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 93/182 (51%), Gaps = 7/182 (3%)
Query: 1841 PRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKY--CQFFT 1898
P+ ++G ++ R NGN + R +A + L A K+ C+ F+
Sbjct: 236 PKMAIVGGVKFYRSKNGNLYRHGIVKAQRYVARSPLNHPLTCYSQSSAVKKVNVPCRNFS 295
Query: 1899 RFGKCNKDNGKCPYIHDPSKIAVCTKFLK-GLCSNSD-CKLTHKVIPERMPDCSYFLQGL 1956
G C K +C YIHDP+K+AVC FL+ G C N D C L+H++ ER+P C +F++
Sbjct: 296 MTGSCTK-GPRCRYIHDPAKVAVCKDFLQQGECVNGDSCDLSHELSAERIPTCLHFIKDS 354
Query: 1957 CTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRL 2015
CT +C + H V+P A C F L GYC G C +H + CP F TG C C+L
Sbjct: 355 CTKPDCKFTHAKVSPAAPVCREFGLYGYCEKGASCTDRHVFECPDFSNTGVCNTKG-CKL 413
Query: 2016 HH 2017
H
Sbjct: 414 PH 415
>gi|408396236|gb|EKJ75398.1| hypothetical protein FPSE_04417 [Fusarium pseudograminearum CS3096]
Length = 435
Score = 112 bits (281), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 109/241 (45%), Gaps = 30/241 (12%)
Query: 1784 ASETKIRIRSCRERIFRIGSVRYKMDSSRRTLQRISDDSSPCAAGPTLEKNAKKSYIPRR 1843
A + ++ ++ + R+ G K+ + + + P A P N+ S P+
Sbjct: 158 AGQNELTVQGVQFRVMDGGKKLVKIPGMCKVPDGVELCTLPVADAP----NSSSSRTPKT 213
Query: 1844 LVIGNDEYVRIGNGN----QLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTR 1899
+ + R GN +++ D +R V +++ C+ F+
Sbjct: 214 ATVAGVRFYRTKTGNLVASRIVNDQRRSGAVKKIDQL-----------------CKIFST 256
Query: 1900 FGKCNKDNGKCPYIHDPSKIAVCTKFLK-GLCSNSD-CKLTHKVIPERMPDCSYFLQGLC 1957
G C K +C YIHDPSK+A+C LK G C N + C L+H + PER P+C +F +G C
Sbjct: 257 TGSCTK-GPRCRYIHDPSKVALCKNILKDGQCVNGELCDLSHDMTPERTPNCLHFAKGHC 315
Query: 1958 TNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLH 2016
+CPY H P A C F GYC G C ++H + CP F TG C + C+L
Sbjct: 316 AKDDCPYTHSRAPPAALVCRSFGFNGYCEKGAGCTERHVFECPDFSNTGRCKIKG-CKLP 374
Query: 2017 H 2017
H
Sbjct: 375 H 375
>gi|358398723|gb|EHK48074.1| hypothetical protein TRIATDRAFT_290555 [Trichoderma atroviride IMI
206040]
Length = 431
Score = 112 bits (281), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 108/225 (48%), Gaps = 38/225 (16%)
Query: 1801 IGSVRYKMDSSRRTLQRISDDSSPCAAGPTLEKNAKKSYIPRRLVIGNDEYVRIGNGN-- 1858
+ +R+++ + L + D P PT+ P+ VI ++ R GN
Sbjct: 178 VNGIRFRVLDGGKKLVKTPGDPLP----PTM--------TPKMTVIAGVKFHRTKTGNLV 225
Query: 1859 --QLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRFGKCNKDNG-KCPYIHD 1915
++++D +R V ++ C+ F+ G C+ G C Y+HD
Sbjct: 226 AQRIVKDHRRSGMVKKLDQ-----------------RCKIFSTTGNCSCSKGPACRYVHD 268
Query: 1916 PSKIAVCTKFLK-GLCSNSD-CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNA 1973
P K+A+C FLK G C N + C L+H++ PER+P+C +F +G C+ +CP+ H +P+A
Sbjct: 269 PDKVALCKDFLKDGKCPNGESCDLSHELTPERVPNCLHFAKGQCSRPDCPFTHSKASPSA 328
Query: 1974 STCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
C F GYC G +C +H + CP F TG C C+L H
Sbjct: 329 PVCAAFGFCGYCDKGADCTDRHVFECPDFSNTGFCKTRG-CKLLH 372
>gi|258577983|ref|XP_002543173.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237903439|gb|EEP77840.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 337
Score = 112 bits (280), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 97/192 (50%), Gaps = 16/192 (8%)
Query: 1840 IPRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVR---WSLH--------TARLRLA 1888
IP ++V G + VR+ N +R V VR +LH +
Sbjct: 72 IPFQVVKGGSKLVRLSNDPTTANATPKRVSVGGVAFVRSKNGNLHRLGAVVSKKKTGVVK 131
Query: 1889 RKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLK-GLC-SNSDCKLTHKVIPERM 1946
+K + C+ FT G C K KCPYIHDP+K+A+C +FL+ G C + C L+H+ PER
Sbjct: 132 KKDELCKRFTATGTCYK-GPKCPYIHDPNKVAICKEFLQTGKCNAGPACDLSHEPSPERS 190
Query: 1947 PDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATG 2005
P C +FL+G C+N C Y HV V P A C F + G+C G EC +H CP + TG
Sbjct: 191 PTCVHFLRGRCSNPECRYAHVRVTPGAPVCRNFAILGFCDKGAECCDRHVVECPDYANTG 250
Query: 2006 SCALGAKCRLHH 2017
C KC L H
Sbjct: 251 KCN-KQKCPLPH 261
>gi|358387184|gb|EHK24779.1| hypothetical protein TRIVIDRAFT_178368 [Trichoderma virens Gv29-8]
Length = 425
Score = 112 bits (279), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 103/224 (45%), Gaps = 38/224 (16%)
Query: 1801 IGSVRYKMDSSRRTLQRISDDSSPCAAGPTLEKNAKKSYIPRRLVIGNDEYVRIGNGN-- 1858
+ +R+++ + L + DD + A P L VI ++ R GN
Sbjct: 174 VNGIRFRVLDGGKKLVKAPDDPTSAAMTPKL------------TVIAGVKFHRTKTGNLV 221
Query: 1859 --QLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDP 1916
+++RD +R V ++ C+ F+ G C K C YIHDP
Sbjct: 222 AQRIVRDQRRSGAVKKLDQ-----------------RCKIFSTTGSCPK-GPTCRYIHDP 263
Query: 1917 SKIAVCTKFLK-GLCSNSD-CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNAS 1974
K+A+C FLK G C N + C L+H+ PER+P C + +G C+ +CP+ H +P A
Sbjct: 264 DKVALCKDFLKDGKCPNGEACDLSHEFTPERVPSCLHHAKGQCSRPDCPFTHSKASPGAP 323
Query: 1975 TCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
CE F GYC G +C +H + CP F TG C C+L H
Sbjct: 324 VCEAFGFCGYCDKGADCTDRHVFECPDFSNTGICKTRG-CKLLH 366
>gi|341038657|gb|EGS23649.1| zinc finger domain-containing protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 444
Score = 112 bits (279), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 92/180 (51%), Gaps = 18/180 (10%)
Query: 1841 PRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRF 1900
P+ VIG ++ R NGN R V+ +++ ++ + C+ F+
Sbjct: 211 PKMAVIGGVKFYRSKNGNLY------RHGVVKAQRQSGAVKKVNVP-------CKQFSMT 257
Query: 1901 GKCNKDNGKCPYIHDPSKIAVCTKFL-KGLCSNSD-CKLTHKVIPERMPDCSYFLQGLCT 1958
G CN+ +C YIHDP K+A+C FL +G C N + C L+H PERMP C +F + CT
Sbjct: 258 GVCNQ-GPRCRYIHDPHKVAICKDFLLQGDCPNGEHCDLSHDPTPERMPTCLHFARDSCT 316
Query: 1959 NKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
+C Y HV ++P A C F GYC G C +H++ CP F TG C C+L H
Sbjct: 317 KSDCKYVHVKLSPTAKVCHDFGFYGYCVKGASCPDRHAFECPDFSNTGVCK-NKGCKLPH 375
>gi|426196583|gb|EKV46511.1| hypothetical protein AGABI2DRAFT_205796 [Agaricus bisporus var.
bisporus H97]
Length = 417
Score = 111 bits (278), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 101/192 (52%), Gaps = 14/192 (7%)
Query: 1851 YVRIGNGNQLI-----RDPK-RRARVLASEKVRWSLHTARLRLARK-RKYCQFFTRFGKC 1903
Y+R G L+ PK RR R + + + ++ RK K C FT+ G C
Sbjct: 160 YIRSGPPGHLMPRSRMYKPKGRRGRNMTLDNTNRTYTQSKKAAIRKIDKPCSKFTKTGTC 219
Query: 1904 NKDNGKCPYIHDPSKIAVCTKFLKGLCS-NSD-CKLTHKVIPERMPDCSYFL-QGLCTNK 1960
++ CPY HDP K+A+C KF++G C N+D C L+H PER P C +FL +G CT +
Sbjct: 220 SRGL-TCPYQHDPKKVAICWKFMQGDCPHNADSCNLSHDPTPERTPLCVHFLNRGRCTKE 278
Query: 1961 NCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPK 2019
CP+ HV+V C+ F + GYC G C K H CP F+ TG C C+L H
Sbjct: 279 KCPFPHVNVGKKEGVCKDFAVLGYCVRGVSCDKNHVRECPEFEETGECRTRG-CKLPH-V 336
Query: 2020 SRSNGKKSRRSR 2031
++N K ++R +
Sbjct: 337 IKANAKWAKRGK 348
>gi|392589980|gb|EIW79310.1| hypothetical protein CONPUDRAFT_138447 [Coniophora puteana RWD-64-598
SS2]
Length = 393
Score = 111 bits (278), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 79/140 (56%), Gaps = 10/140 (7%)
Query: 1886 RLARKRKY----CQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNS--DCKLTH 1939
R A++RKY C FT G C++ CPY HDP+K+A+C FL+G C NS C L+H
Sbjct: 172 RPAKQRKYIDKPCPRFTTTGACSR-GLTCPYQHDPNKVAICWPFLQGNCPNSAETCHLSH 230
Query: 1940 KVIPERMPDCSYFL-QGLCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYV 1997
IPER P C +F G CT ++CP+ HV V C F + GYCA G +C +H
Sbjct: 231 DPIPERTPLCVHFANNGRCTRQSCPFPHVRVGQRKGVCRDFAVLGYCAKGLDCEMQHVRE 290
Query: 1998 CPTFKATGSCALGAKCRLHH 2017
CP F G+C+ C+L H
Sbjct: 291 CPDFAEKGTCSTKG-CKLPH 309
>gi|358372642|dbj|GAA89244.1| CCCH zinc finger protein [Aspergillus kawachii IFO 4308]
Length = 505
Score = 111 bits (278), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 72/126 (57%), Gaps = 5/126 (3%)
Query: 1895 QFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLK-GLC-SNSDCKLTHKVIPERMPDCSYF 1952
+ F R G C K CPYIHDP+K+A+C FL+ G C + C L+H+ P R P C +F
Sbjct: 310 RIFKRLGSCYK-GPTCPYIHDPNKVAMCKDFLQTGQCNAGISCDLSHEPSPHRSPACVHF 368
Query: 1953 LQGLCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGA 2011
L+G C+N C Y HV V P A C F + GYC G EC ++H + CP + G C
Sbjct: 369 LRGRCSNPECRYAHVRVTPGAPVCRDFAVLGYCEKGAECDQRHVHECPDYANEGVCN-KK 427
Query: 2012 KCRLHH 2017
+CRL H
Sbjct: 428 RCRLPH 433
>gi|328772930|gb|EGF82967.1| hypothetical protein BATDEDRAFT_84497 [Batrachochytrium dendrobatidis
JAM81]
Length = 384
Score = 111 bits (277), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 90/164 (54%), Gaps = 11/164 (6%)
Query: 1901 GKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNS--DCKLTHKVIPERMPDCSYFLQGLCT 1958
G+C+K + C +IHD +IA+C FLK N DCKL+H+ P C +F +G C+
Sbjct: 146 GRCDKGDA-CRFIHDRRRIALCFSFLKTKTCNDMPDCKLSHEPTDATTPFCVHFERGRCS 204
Query: 1959 NKNCPYRHVHVNPNASTCEGFLK-GYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
N++C Y HV ++P A C F K GYC G C ++H ++CP ++ G C LG KCRL H
Sbjct: 205 NEDCHYLHVKLSPGAHVCADFAKQGYCEKGSMCLQRHIFLCPDYEKNGECPLGEKCRLPH 264
Query: 2018 PKSRSNGKKSRRSRKPKNTHGRYFGSMLV--EDSESQTAMSERP 2059
RS K +R N R S L+ ED++ + + RP
Sbjct: 265 ---RSKTKPTRPV--SYNDASRNGSSALLTEEDTDEELQLPPRP 303
>gi|396472398|ref|XP_003839099.1| hypothetical protein LEMA_P027720.1 [Leptosphaeria maculans JN3]
gi|312215668|emb|CBX95620.1| hypothetical protein LEMA_P027720.1 [Leptosphaeria maculans JN3]
Length = 327
Score = 111 bits (277), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFL-KGLCSNSD-CKLTHKVIPERMPDCSY 1951
C T G C + CPY HDP+K A+C ++L K C + C L+H E P C +
Sbjct: 141 CPALTSTGVCTRH--ACPYHHDPNKQAICKRWLYKDDCPKGEFCPLSHTATAENAPTCLH 198
Query: 1952 FLQGLCTNKNCPYRHVHVNPNASTCEGFLK-GYCADGDECRKKHSYVCPTFKATGSCALG 2010
F G C N C + H+ VNP A CE F + GYC GD C + H++ CPTF TG C+ G
Sbjct: 199 FQDGRCNNDECRFAHIRVNPAALNCEAFGRLGYCVKGDNCAELHAHECPTFSNTGDCSYG 258
Query: 2011 AKCRLHHPKSRSNGKKSRR 2029
KCRL H S +K+ R
Sbjct: 259 DKCRLGHVYRASRMRKTTR 277
>gi|400595283|gb|EJP63088.1| CCCH zinc finger protein [Beauveria bassiana ARSEF 2860]
Length = 394
Score = 111 bits (277), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 70/116 (60%), Gaps = 4/116 (3%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLK-GLCSNSD-CKLTHKVIPERMPDCSY 1951
C F+ G C+K C Y HDP+K+AVC FLK G C N + C L+H++ ER+P+C +
Sbjct: 229 CNIFSTTGSCSK-GPSCRYQHDPNKVAVCKDFLKEGRCINGEHCDLSHELTMERVPNCLH 287
Query: 1952 FLQGLCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGS 2006
F +G C+N NC Y H P A CE F +GYC G EC ++H Y CP F TG+
Sbjct: 288 FAKGNCSNLNCQYSHSAALPTAPVCEDFGYRGYCGKGGECTERHVYECPAFSNTGT 343
>gi|299744839|ref|XP_001831302.2| CCCH zinc finger protein [Coprinopsis cinerea okayama7#130]
gi|298406312|gb|EAU90465.2| CCCH zinc finger protein [Coprinopsis cinerea okayama7#130]
Length = 442
Score = 110 bits (275), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 89/170 (52%), Gaps = 15/170 (8%)
Query: 1866 RRARVLASEKVRWSLHTARLRLARKRKY----CQFFTRFGKCNKDNGKCPYIHDPSKIAV 1921
RR R L + R S R +KRKY C FT G CN+ C Y HDPSKIA+
Sbjct: 189 RRGRNLTLDNTRKSW-----RENKKRKYLNKPCPRFTTTGACNR-GLTCMYQHDPSKIAI 242
Query: 1922 CTKFLKGLCSNS--DCKLTHKVIPERMPDCSYFL-QGLCTNKNCPYRHVHVNPNASTCEG 1978
C FL+ C N+ C+L+H PER P C +FL +G CT CP+ HV+V C
Sbjct: 243 CWNFLQDNCPNTAETCQLSHDPTPERTPLCVHFLNKGRCTRGGCPFPHVNVGKREGICRD 302
Query: 1979 F-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKS 2027
F + GYC G +C K+H CP F G+C+ C+L H + G+K+
Sbjct: 303 FAVLGYCEKGLDCDKQHIRECPDFAENGTCSTKG-CKLPHVIRANRGRKA 351
>gi|449547958|gb|EMD38925.1| hypothetical protein CERSUDRAFT_92961 [Ceriporiopsis subvermispora B]
Length = 415
Score = 110 bits (275), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 1886 RLARKR-----KYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNS--DCKLT 1938
RL+ KR K C FT G CN+ CPY HDP+KIA+C FL+G C N+ C L+
Sbjct: 171 RLSTKRAKYVDKPCPRFTTTGACNR-GLTCPYQHDPAKIAICWNFLQGNCPNTAETCPLS 229
Query: 1939 HKVIPERMPDCSYFL-QGLCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSY 1996
H PER P C +F G CT NCP+ HV V C F + GYC G +C K+H
Sbjct: 230 HDPTPERTPLCVHFANNGRCTRANCPFPHVRVGQRDGVCRDFAVLGYCEKGLDCDKQHIR 289
Query: 1997 VCPTFKATGSCALGAKCRLHH 2017
CP F G+C C+L H
Sbjct: 290 ECPDFAEKGACTTKG-CKLPH 309
>gi|320591618|gb|EFX04057.1| ccch zinc finger DNA-binding protein [Grosmannia clavigera kw1407]
Length = 410
Score = 110 bits (275), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 92/186 (49%), Gaps = 29/186 (15%)
Query: 1838 SYIPRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKY---C 1894
S P+ ++G ++ R NGN R + A+ R +K C
Sbjct: 179 SSTPKTAIVGGVKFFRSKNGNLY----------------RHGVVKAQRRAGNVKKIDQPC 222
Query: 1895 QFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFL-KGLC-SNSDCKLTHKVIPERMPDCSYF 1952
+ F+ G C YIHDP K+AVC +FL KG C S DC L+H++ ER P C ++
Sbjct: 223 KIFSTTGPF------CRYIHDPVKVAVCKEFLQKGHCASGDDCDLSHELTAERTPFCLHY 276
Query: 1953 LQGLCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGA 2011
+G CTN NCPY H V+ A C F L GYC G +C ++H + CP F TG C +
Sbjct: 277 AKGSCTNPNCPYTHSEVSTGALVCRPFGLYGYCEKGADCLERHVFECPDFSNTGVCKVKG 336
Query: 2012 KCRLHH 2017
C+L H
Sbjct: 337 -CKLPH 341
>gi|302926493|ref|XP_003054305.1| hypothetical protein NECHADRAFT_98820 [Nectria haematococca mpVI
77-13-4]
gi|256735246|gb|EEU48592.1| hypothetical protein NECHADRAFT_98820 [Nectria haematococca mpVI
77-13-4]
Length = 470
Score = 110 bits (274), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 71/120 (59%), Gaps = 5/120 (4%)
Query: 1901 GKCNKDNGKCPYIHDPSKIAVCTKFLK-GLCSNSD-CKLTHKVIPERMPDCSYFLQGLCT 1958
G C+K +C YIHDP+K+A+C FLK G C N + C L+H + ER P+C +F +G C
Sbjct: 293 GSCSK-GPRCRYIHDPNKVALCKDFLKEGRCINGESCDLSHDMTAERTPNCLHFAKGHCA 351
Query: 1959 NKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
+CPY H +P A C F GYC+ G EC ++H + CP F TG C + C+L H
Sbjct: 352 KADCPYTHSKASPAAPVCRDFGFNGYCSKGAECAERHVFECPDFSNTGRCRVKG-CKLPH 410
>gi|229892070|sp|P0C945.1|Y1158_ARATH RecName: Full=Uncharacterized protein At1g21580
Length = 1696
Score = 110 bits (274), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/277 (35%), Positives = 145/277 (52%), Gaps = 30/277 (10%)
Query: 1356 TRPRTWHRTESSSASPAPGNKSL---LPPQNQLPKKVAKYQSMSYIRKGNSLVRKPA--- 1409
T+ TWHR +S S K L L Q + PK A+ + SY+RKGNSL+RKP+
Sbjct: 1417 TKRHTWHRKSDASPSSFVAAKPLSSTLSTQQKFPKVTAQSNN-SYVRKGNSLLRKPSHGS 1475
Query: 1410 PVAAVSQISHGLTSSVYWLNSSGIGESKKTRGSEGGADVVDPPSFLR-GVNAPLERPRTP 1468
P AA+ G+ S LN + + K+ GS DV + S ++ G A LER P
Sbjct: 1476 PGAAL-----GIPPSAIQLNHFTVED--KSTGSSNMVDVDNASSLVKTGEIATLERQSKP 1528
Query: 1469 PL-PVVAKVPNHATSSTGDYTSSPVAEPLPNGCSETKSDTQKLMEINDELNFSNAALNIS 1527
P +K+ N +S+G S + L G E+ D+ + E NF ++ +
Sbjct: 1529 PSDSSTSKLSNAIATSSGKCALSYSTDHLTTGLPESIMDSA----TSGEANFPHSGGDTL 1584
Query: 1528 KT--PVNQTGSVNGLESQGELNDGTLCTSNVKRITYLKRKSNQLIAASNGCSLSVQNPDK 1585
KT + QTG + + Q + N L +SN+KR+ Y+KRK+NQL+AAS+ + + +
Sbjct: 1585 KTSDTLIQTGYAS--DCQQKRNPSDLDSSNLKRMVYVKRKANQLVAASD-----IHDVSQ 1637
Query: 1586 TQSTASDGYYKRRKNQLIRTPLESHINQTVSLADGSF 1622
Q +SDGY+KR KNQL+R ES NQ++SL D +
Sbjct: 1638 NQIPSSDGYFKRSKNQLVRNS-ESRCNQSISLPDDAL 1673
Score = 107 bits (267), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 95/145 (65%), Gaps = 10/145 (6%)
Query: 266 KREFYASDAGRYGNNRGSREHSYEYNRTPRKQVQKKSALLRIQKPY-YRNRDDGEL---- 320
K ++Y S+ +Y + RG RE S E NRTPRKQVQKKSALLR++ P Y+N + E
Sbjct: 284 KDDYYHSEIEQYFD-RGRREASNELNRTPRKQVQKKSALLRLETPRSYKNSRENEWSRQH 342
Query: 321 -HHSN--YEIKSGSFRGKDQVVFSDRDVGEHEQREGSPVELDVSFKSNSLVAKAIVATSS 377
HH+ S S+RGK+ + SDR + E +QR SPV+LD+SFKSN LVAK + + +S
Sbjct: 343 NHHNGNGKRFNSNSYRGKEHLGHSDRGLVE-KQRGRSPVDLDISFKSNVLVAKPVASPTS 401
Query: 378 SAIVSDANLTPKKGNTRKIVMSNKD 402
+ I S A++TP+ R+ ++S+K+
Sbjct: 402 AGIRSGASVTPRSIKARRALLSDKN 426
>gi|429239871|ref|NP_595413.2| zinc finger CCCH domain-containing protein [Schizosaccharomyces pombe
972h-]
gi|408360243|sp|O74823.3|YBJC_SCHPO RecName: Full=Zinc finger CCCH domain-containing protein C337.12
gi|347834279|emb|CAA21282.3| human ZC3H3 homolog [Schizosaccharomyces pombe]
Length = 376
Score = 109 bits (273), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 73/127 (57%), Gaps = 4/127 (3%)
Query: 1893 YCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNS-DCKLTHKVIPERMPDCSY 1951
YC+++ G C K C ++H+P++ +C KFL G C+ + DC L+H++ P R+P C Y
Sbjct: 207 YCRYYNANGICGK-GAACRFVHEPTRKTICPKFLNGRCNKAEDCNLSHELDPRRIPACRY 265
Query: 1952 FLQGLCTNKNCPYRHVHVNPNASTCEGFLK-GYCADGDECRKKHSYVCPTFKATGSCALG 2010
FL G C N NC Y H+H + NA C F K G+C G C+ +H C + GSC
Sbjct: 266 FLLGKCNNPNCRYVHIHYSENAPICFEFAKYGFCELGTSCKNQHILQCTDYAMFGSCN-N 324
Query: 2011 AKCRLHH 2017
+C L+H
Sbjct: 325 PQCSLYH 331
>gi|169602967|ref|XP_001794905.1| hypothetical protein SNOG_04488 [Phaeosphaeria nodorum SN15]
gi|111067128|gb|EAT88248.1| hypothetical protein SNOG_04488 [Phaeosphaeria nodorum SN15]
Length = 315
Score = 109 bits (273), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 96/193 (49%), Gaps = 10/193 (5%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFL-KGLCSNSD-CKLTHKVIPERMPDCSY 1951
C FT G C++ C Y+HDP K A+C +L KG C D C L+H P P C +
Sbjct: 130 CPQFTMTGICSRHG--CRYLHDPEKQAICKPWLFKGECPKGDACLLSHSPTPHNTPMCKH 187
Query: 1952 FLQGLCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALG 2010
F G C +C + HV ++P A CE F L GYC G +C + H++ CP F TGSC G
Sbjct: 188 FQDGRCNKDDCRFSHVRISPAAPNCEAFGLVGYCEKGADCSELHAHECPHFSNTGSCRYG 247
Query: 2011 AKCRLHHPKSRSNGKKSRRSRKPKNTHGRYFGSMLVEDSESQTAMSERPTVQNNGNLFVE 2070
KCRL H S +K+ +RK + GS ++S A + P + + F +
Sbjct: 248 DKCRLGHVHRASRMRKA--TRKSPDGLSSPEGSSR-QNSNDADAETWTPGATPDPHQFTQ 304
Query: 2071 GKLVDYIGLDVSD 2083
DY+ LD D
Sbjct: 305 --QYDYVSLDADD 315
>gi|254564527|ref|XP_002489374.1| hypothetical protein [Komagataella pastoris GS115]
gi|238029170|emb|CAY67090.1| Hypothetical protein PAS_chr1-3_0039 [Komagataella pastoris GS115]
gi|328349804|emb|CCA36204.1| Zinc finger CCCH domain-containing protein 3 [Komagataella pastoris
CBS 7435]
Length = 356
Score = 109 bits (273), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 102/205 (49%), Gaps = 18/205 (8%)
Query: 1832 EKNAKKSYIPRRLVIGNDEYVRIGNGNQLIR---------DPKRRARVLASEKVRWSLHT 1882
+KNA + R+ I +YV I N ++L+ D +++ + E VR T
Sbjct: 66 KKNASEYRHKNRIDIDGSKYVEIKNASRLVPVSHLDAGACDDEKKITIDNREYVRQK--T 123
Query: 1883 ARLRLARKRK----YCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLT 1938
+L K K C +F G C + + C Y+HD + ++C +FLKG C N+ C L+
Sbjct: 124 GSFKLLDKSKEIQELCIYFVTTGNCARKSS-CRYLHDANMKSLCKEFLKGTCYNAYCTLS 182
Query: 1939 HKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYV 1997
HK P C ++ G C+N+NC Y H + A+ C F + G C DG C+ +H ++
Sbjct: 183 HKPTQFNSPSCKFYNTGFCSNENCSYTHKKDSSEAAVCRPFAVNGICPDGMTCKLRHEFI 242
Query: 1998 CPTFKATGSCALGAKCRLHHPKSRS 2022
CP F +G+C + C L HP ++
Sbjct: 243 CPEFDESGTCHIRF-CALPHPSKKA 266
>gi|317139617|ref|XP_001817643.2| CCCH zinc finger protein [Aspergillus oryzae RIB40]
Length = 452
Score = 109 bits (272), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 1829 PTLEKNAKKSYIPRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVR---WSLH---- 1881
P+ E + IP R+ G + +R+ + + + +R + VR +LH
Sbjct: 181 PSAEYQVYLNDIPFRVSRGGSKLIRVSDDPNTVNNTPKRVTIAGVTFVRSKNGNLHRLGA 240
Query: 1882 -TARLR--LARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLK-GLCSNS-DCK 1936
T++ + +K + C+ FT G C K C Y+HDP K+A+C FL+ G C+ C
Sbjct: 241 VTSKRKPNATKKNELCRRFTTTGTCYK-GPSCLYVHDPDKVALCKDFLQTGDCTAGISCD 299
Query: 1937 LTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLK-GYCADGDECRKKHS 1995
L+H+ P R P C +FL+G C+N C Y H+ + P A C F GYC G C ++H
Sbjct: 300 LSHEPSPHRSPTCMHFLRGRCSNPECRYAHIRLIPGAPVCRDFANLGYCEKGANCDQRHV 359
Query: 1996 YVCPTFKATGSCALGAKCRLHH 2017
+ CP + TG C +CRL H
Sbjct: 360 HECPDYANTGVCN-KKRCRLPH 380
>gi|238483051|ref|XP_002372764.1| hypothetical protein AFLA_078470 [Aspergillus flavus NRRL3357]
gi|220700814|gb|EED57152.1| hypothetical protein AFLA_078470 [Aspergillus flavus NRRL3357]
Length = 470
Score = 108 bits (270), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 90/180 (50%), Gaps = 19/180 (10%)
Query: 1841 PRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRF 1900
P+R+ I +VR NGN R + S++ + +K + C+ FT
Sbjct: 235 PKRVTIAGVTFVRSKNGNL------HRLGAVTSKR--------KPNATKKNELCRRFTTT 280
Query: 1901 GKCNKDNGKCPYIHDPSKIAVCTKFLK-GLCSNS-DCKLTHKVIPERMPDCSYFLQGLCT 1958
G C K C Y+HDP K+A+C FL+ G C+ C L+H+ P R P C +FL+G C+
Sbjct: 281 GTCYK-GPSCLYVHDPDKVALCKDFLQTGDCTAGISCDLSHEPSPHRSPTCMHFLRGRCS 339
Query: 1959 NKNCPYRHVHVNPNASTCEGFLK-GYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
N C Y H+ + P A C F GYC G C ++H + CP + TG C +CRL H
Sbjct: 340 NPECRYAHIRLIPGAPVCRDFANLGYCEKGANCDQRHVHECPDYANTGVCN-KKRCRLPH 398
>gi|320168770|gb|EFW45669.1| ZC3H3 protein [Capsaspora owczarzaki ATCC 30864]
Length = 298
Score = 108 bits (270), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 62/93 (66%), Gaps = 7/93 (7%)
Query: 1946 MPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATG 2005
MP CS+FLQG C+N CPY HV+V P+A CE F+KG+C DG+ C+KKH++VC F+ TG
Sbjct: 1 MPVCSFFLQGRCSNDACPYSHVNVAPDAPVCENFVKGHCPDGELCKKKHTFVCEDFRRTG 60
Query: 2006 SCALGAKCRLHHPKSRSNGKKSRRSRKPKNTHG 2038
+C G KC L H + ++R +PK+ G
Sbjct: 61 ACPRGTKCNLQH-------RTAKRRAQPKHETG 86
>gi|322708844|gb|EFZ00421.1| CCCH zinc finger protein [Metarhizium anisopliae ARSEF 23]
Length = 383
Score = 108 bits (270), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 69/122 (56%), Gaps = 10/122 (8%)
Query: 1905 KDNGKCP------YIHDPSKIAVCTKFLK-GLCSNSD-CKLTHKVIPERMPDCSYFLQGL 1956
K +G CP Y HDP+++AVC FLK G C N + C L+H V PER+P+C ++ +G
Sbjct: 203 KSSGSCPKGPSCRYQHDPTRVAVCKDFLKDGKCPNGESCDLSHDVSPERVPNCLHYAKGH 262
Query: 1957 CTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRL 2015
CT +CPY H P A CE F GYC G C ++H + CP F TG C C+L
Sbjct: 263 CTKADCPYTHSRAAPGALVCEAFGFYGYCDKGASCTERHVFECPDFSNTGICK-SKGCKL 321
Query: 2016 HH 2017
H
Sbjct: 322 LH 323
>gi|392565612|gb|EIW58789.1| hypothetical protein TRAVEDRAFT_47931 [Trametes versicolor FP-101664
SS1]
Length = 428
Score = 107 bits (268), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 101/212 (47%), Gaps = 21/212 (9%)
Query: 1824 PCAAGPTLEKNAKKSYI--PRRLVIGNDEYVRIGNGNQLIRDPKR--RARVLASEKVRWS 1879
P A P +N + + PR R N N + + +R ++R LA++K ++S
Sbjct: 125 PPAPHPAFMRNKAGTLMTGPRTYKPKTSARGRAMNRNMTLNNNRRPYQSRRLAAKKAKYS 184
Query: 1880 LHTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNS--DCKL 1937
K C FT G CN+ C Y HDP+KIA+C FL+G C ++ C L
Sbjct: 185 -----------DKPCPRFTSTGSCNR-GLTCMYQHDPNKIAICWPFLQGNCPHTAETCAL 232
Query: 1938 THKVIPERMPDCSYFL-QGLCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHS 1995
+H P+R P C +F G CT NC Y HVHV C F + GYC G +C K+H
Sbjct: 233 SHDPTPQRTPLCVHFANNGRCTRANCLYPHVHVGAREGICRDFAVLGYCEKGLDCDKQHV 292
Query: 1996 YVCPTFKATGSCALGAKCRLHHPKSRSNGKKS 2027
CP F G C + C+L H + G+K+
Sbjct: 293 RECPDFAEKGQCTIKG-CKLPHVIRANRGRKA 323
>gi|390596590|gb|EIN05991.1| hypothetical protein PUNSTDRAFT_145382 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 374
Score = 107 bits (267), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 79/146 (54%), Gaps = 12/146 (8%)
Query: 1892 KYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNS--DCKLTHKVIPERMPDC 1949
K C FT G C++ C Y HDP KIA+C FL+G C+ + C L+H IP+R P C
Sbjct: 156 KPCPRFTTTGSCSR-GLTCAYQHDPDKIAICWPFLQGNCAKTAETCALSHDPIPQRTPLC 214
Query: 1950 SYFLQ-GLCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSC 2007
+F G CT NCP+ HV V P C F + GYC G +C +H CP F TG+C
Sbjct: 215 VHFANAGRCTRTNCPFPHVRVGPKQGVCRDFAVLGYCDKGLDCEHQHVRECPDFADTGAC 274
Query: 2008 ALGAKCRLHHPKSRSNGKKSRRSRKP 2033
+ C+L H R+N R+RKP
Sbjct: 275 MIKG-CKLPH-VIRAN-----RNRKP 293
>gi|398411630|ref|XP_003857153.1| hypothetical protein MYCGRDRAFT_66788 [Zymoseptoria tritici IPO323]
gi|339477038|gb|EGP92129.1| hypothetical protein MYCGRDRAFT_66788 [Zymoseptoria tritici IPO323]
Length = 441
Score = 107 bits (267), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 112/242 (46%), Gaps = 41/242 (16%)
Query: 1797 RIFRIGSVRYKMDSSRRTLQRISDDSSPCAAGPTLEKNAKKS-------YIPRRLVIGND 1849
R I +R+ + L RI S P P+ K+ P++ I +
Sbjct: 144 REVEIEGIRFHLKEDGSKLIRIRGQSHP---RPSFWTGLNKTDTAHDPKETPKKAKIADV 200
Query: 1850 EYVRIGNGNQLIRDPKRRARVLASEK---VRWSLHTARLRLARKRKYCQFFTRFGKCNKD 1906
E+ R NGN + R++A + R+ L AR ++ +YC N D
Sbjct: 201 EFYRTKNGNLV--------RMMAQNQNGTQRYVL-IARKHAGKRPRYC--------ANHD 243
Query: 1907 NG------KCPYIHDPSKIAVCTKFLK-GLCSNSD-CKLTHKVIPERMPDCSYFLQGLCT 1958
G C + H+P K+A+C + ++ G C + C ++H++ R+P C++F +G CT
Sbjct: 244 LGTCIFGPSCKFTHNPEKVAICKELMRSGSCKAGETCDMSHELTYHRVPACTHFQRGNCT 303
Query: 1959 NKNCPYRHVHVNPNASTCEGFLK-GYCADGDECRKKHSYVCPTFKATGSCALGAK--CRL 2015
N C Y HVHV+P A C F GYCA G +C +H + CP + +TG CA K C L
Sbjct: 304 NDACRYPHVHVSPTARVCRPFATLGYCAKGPDCDDRHVFECPDYASTGHCANHEKGACAL 363
Query: 2016 HH 2017
H
Sbjct: 364 QH 365
>gi|342873918|gb|EGU76012.1| hypothetical protein FOXB_13484 [Fusarium oxysporum Fo5176]
Length = 458
Score = 107 bits (266), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 68/121 (56%), Gaps = 5/121 (4%)
Query: 1900 FGKCNKDNGKCPYIHDPSKIAVCTKFLK-GLCSNSD-CKLTHKVIPERMPDCSYFLQGLC 1957
G C K +C YIHDP+K+A+C LK G C N + C L+H + PER P+C ++ +G C
Sbjct: 280 IGSCTK-GPRCRYIHDPNKVALCKDILKDGQCVNGESCDLSHDMTPERTPNCLHYAKGHC 338
Query: 1958 TNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLH 2016
+CPY H +P A C F GYC G EC +H + CP F TG C + C+L
Sbjct: 339 AKADCPYTHSKASPAAPVCRNFGFNGYCEMGAECTDRHVFECPDFSNTGRCKVKG-CKLP 397
Query: 2017 H 2017
H
Sbjct: 398 H 398
>gi|388580760|gb|EIM21072.1| hypothetical protein WALSEDRAFT_38769 [Wallemia sebi CBS 633.66]
Length = 428
Score = 106 bits (265), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 101/211 (47%), Gaps = 37/211 (17%)
Query: 1841 PRRLVIGNDEYVRIGNGNQLIRD---PKRRARVLASEKVRW--------SLHTAR-LRLA 1888
P+++ I YVR +GN L+RD KR + +++ R S+ AR ++
Sbjct: 130 PKKMTIDGTNYVRTKSGN-LVRDIFAKKRNEEAMKAKQQRLDKMVGMLGSVQRARNTQIQ 188
Query: 1889 RK-----------------RKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCS 1931
RK RK C FT+ G+C+K CPY+HD SK A+C FL+ C
Sbjct: 189 RKPHNKKEVLSEDQKISFGRKRCPTFTKSGRCSK-ALHCPYVHDSSKTAICPHFLRKKCR 247
Query: 1932 NSD--CKLTHKVIPERMPDCSYFL--QGLCTNKNCPYRHVHVNPNASTCEGF-LKGYCAD 1986
NSD C L+H P MP+CS+F G C + HVH++ +AS C F + G+C
Sbjct: 248 NSDSSCPLSHTPSPNNMPNCSHFESPNGCRAGDECLFTHVHLSKDASVCRDFAVLGFCDK 307
Query: 1987 GDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
G +C KH CP + G C C L H
Sbjct: 308 GLDCDSKHVRECPDYAENGECK-NPSCNLPH 337
>gi|110737278|dbj|BAF00586.1| hypothetical protein [Arabidopsis thaliana]
Length = 1380
Score = 106 bits (265), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 95/145 (65%), Gaps = 10/145 (6%)
Query: 266 KREFYASDAGRYGNNRGSREHSYEYNRTPRKQVQKKSALLRIQKPY-YRNRDDGEL---- 320
K ++Y S+ +Y + RG RE S E NRTPRKQVQKKSALLR++ P Y+N + E
Sbjct: 284 KDDYYHSEIEQYFD-RGRREASNELNRTPRKQVQKKSALLRLETPRSYKNSRENEWSRQH 342
Query: 321 -HHSN--YEIKSGSFRGKDQVVFSDRDVGEHEQREGSPVELDVSFKSNSLVAKAIVATSS 377
HH+ S S+RGK+ + SDR + E +QR SPV+LD+SFKSN LVAK + + +S
Sbjct: 343 NHHNGNGKRFNSNSYRGKEHLGHSDRGLVE-KQRGRSPVDLDISFKSNVLVAKPVASPTS 401
Query: 378 SAIVSDANLTPKKGNTRKIVMSNKD 402
+ I S A++TP+ R+ ++S+K+
Sbjct: 402 AGIRSGASVTPRSIKARRALLSDKN 426
>gi|367020802|ref|XP_003659686.1| hypothetical protein MYCTH_2297028 [Myceliophthora thermophila ATCC
42464]
gi|347006953|gb|AEO54441.1| hypothetical protein MYCTH_2297028 [Myceliophthora thermophila ATCC
42464]
Length = 485
Score = 106 bits (264), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 94/220 (42%), Gaps = 49/220 (22%)
Query: 1841 PRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKY------- 1893
P+ VIG ++ R NGN R V A V W L +L A +
Sbjct: 203 PKMAVIGGVKFYRSKNGNLY-----RHGVVKAQRYVSWHLRAGQLTPAISGRQSGAVKKV 257
Query: 1894 ---CQFFTRFGKC------------------------NKDNG------KCPYIHDPSKIA 1920
C+ F+ G N+D G +C Y+HDP K+A
Sbjct: 258 NVPCKQFSMTGNIQHFLDRRPERHPPDRASVSDPRLTNRDTGSCTLGPRCRYVHDPHKVA 317
Query: 1921 VCTKFLK-GLCSNSD-CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEG 1978
+C FL+ G C + D C L+H+ PER P C +F + CT +C Y HV V+P A C
Sbjct: 318 ICKDFLQQGECPSGDNCDLSHEPTPERTPTCLHFARDNCTKPDCKYAHVKVSPAAPVCRD 377
Query: 1979 F-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
F GYC G C +H + CP F TG C + C+L H
Sbjct: 378 FGFYGYCQKGAGCSDRHVFECPDFSNTGVCKIKG-CKLPH 416
>gi|170086694|ref|XP_001874570.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649770|gb|EDR14011.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 398
Score = 106 bits (264), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 103/202 (50%), Gaps = 30/202 (14%)
Query: 1888 ARKRKY----CQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNS--DCKLTHKV 1941
A+++KY C FT G C + C Y HDPSKIA+C FL+G C+ + C L+H
Sbjct: 191 AKRQKYSDKPCPRFTTTGSCGR-GLTCMYQHDPSKIAICWNFLQGNCTKTAETCDLSHDP 249
Query: 1942 IPERMPDCSYFL-QGLCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCP 1999
PER P C +FL +G CT + CP+ HV+V C F + GYC G +C K+H CP
Sbjct: 250 TPERTPLCLHFLNKGRCTRQRCPFPHVNVGTRQGVCRDFAVLGYCERGLDCDKQHVRECP 309
Query: 2000 TFKATGSCALGAKCRLHHPKSRSNGKKSRRSRKPKNTHGRYFGSMLVEDSESQTAMSERP 2059
F G+C+ C+L H R+N R+RK +VE + T M+E P
Sbjct: 310 DFAEKGTCSTKG-CKLPH-VIRAN-----RNRK------------VVEPPTAVTTMTETP 350
Query: 2060 TVQNNGNLFVE-GKLVD-YIGL 2079
+ + E G+L D YI L
Sbjct: 351 ASGDEERVTAEAGQLGDEYISL 372
>gi|409081350|gb|EKM81709.1| hypothetical protein AGABI1DRAFT_111973 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 250
Score = 105 bits (262), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 84/144 (58%), Gaps = 7/144 (4%)
Query: 1892 KYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCS-NSD-CKLTHKVIPERMPDC 1949
K C FT+ G C++ CPY HDP K+A+C KF++G C N+D C L+H PER P C
Sbjct: 39 KPCSKFTKTGTCSR-GLTCPYEHDPKKVAICWKFMQGDCPHNADSCNLSHDPTPERTPLC 97
Query: 1950 SYFL-QGLCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSC 2007
+FL +G CT + CP+ HV+V C+ F + GYC G C K H CP F+ TG C
Sbjct: 98 VHFLNRGRCTKEKCPFPHVNVGKKEGVCKDFAVLGYCVRGVSCDKNHVRECPEFEETGEC 157
Query: 2008 ALGAKCRLHHPKSRSNGKKSRRSR 2031
+C+L H ++N K ++R +
Sbjct: 158 RT-RRCKLPH-VIKANAKWAKRGK 179
>gi|440473977|gb|ELQ42746.1| CCCH zinc finger protein [Magnaporthe oryzae Y34]
gi|440485019|gb|ELQ65018.1| CCCH zinc finger protein [Magnaporthe oryzae P131]
Length = 492
Score = 105 bits (262), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 110/238 (46%), Gaps = 44/238 (18%)
Query: 1801 IGSVRYKMDSSRRTLQRISDDSSPCAAGPTLEKNAKKSYIPRRLVIGNDEYVRIGNGNQL 1860
I +++ + + L +++D+++P A P++ V+G +++R NGN +
Sbjct: 212 IEGIKFHVAKNGSKLVKVADNNAPKA-------------TPKQAVVGGVKFLRSRNGN-M 257
Query: 1861 IR---------DPKRRARVLASEK-------VRWSLH--TARLRLARKRKYCQFFTRFGK 1902
+R DP+ + +EK VR L TA + RK+
Sbjct: 258 VRHDIVKAQRYDPRPPSCGTLTEKFSRQNGPVRKPLRHSTATVTWLNARKWASI------ 311
Query: 1903 CNKDNGKCPYIHDPSKIAVCTKFL-KGLCSNSD-CKLTHKVIPERMPDCSYFLQGLCTNK 1960
+ C Y HDP K+A+C FL KG C D C L+H+ PER P C +F +G C N
Sbjct: 312 --ESCPLCRYQHDPLKVAICKDFLLKGDCIGGDSCDLSHEPTPERTPACLHFAKGNCNNP 369
Query: 1961 NCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
C Y HV V P + C F + GYC G C +H + CP F TG C + C+L H
Sbjct: 370 QCRYTHVQVTPGSLVCRDFGIYGYCNKGSNCEDRHVFECPDFSNTGHCKIKG-CKLTH 426
>gi|326432510|gb|EGD78080.1| hypothetical protein PTSG_08958 [Salpingoeca sp. ATCC 50818]
Length = 218
Score = 105 bits (261), Expect = 4e-19, Method: Composition-based stats.
Identities = 50/128 (39%), Positives = 71/128 (55%), Gaps = 3/128 (2%)
Query: 1883 ARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVI 1942
A L + ++ C F RFG+C + C + HDP+ +AVC ++L CSN C H+ I
Sbjct: 93 AGLGPSTQKTNCLHFVRFGQCRR-GPTCAFAHDPASVAVCPRYLTSACSNP-CPRQHQAI 150
Query: 1943 PERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFK 2002
+PDC +F +G C NC YRHV ++ +A CE F+ G C D C H Y+CP +
Sbjct: 151 GSMVPDCVFFSRGKCDRDNCRYRHVRLDEDALVCEDFVFGKCKDA-ACPNIHEYICPGYF 209
Query: 2003 ATGSCALG 2010
A G+C G
Sbjct: 210 AGGTCTNG 217
>gi|410987938|ref|XP_004000250.1| PREDICTED: zinc finger CCCH domain-containing protein 3 [Felis catus]
Length = 925
Score = 105 bits (261), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 69/118 (58%)
Query: 1946 MPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATG 2005
MP CSYFL+G+C+N NCPY HV+V+ A C FLKGYC G +C+KKH+ +CP F G
Sbjct: 682 MPVCSYFLKGICSNSNCPYSHVYVSRKAEVCTDFLKGYCPLGAKCKKKHTLLCPDFSRRG 741
Query: 2006 SCALGAKCRLHHPKSRSNGKKSRRSRKPKNTHGRYFGSMLVEDSESQTAMSERPTVQN 2063
C GA+C+L H + G+++ + P+ + +++ ++RPT Q
Sbjct: 742 VCPRGAQCQLLHRNQKRPGRRAASAPAPEPSSASPKSKAASSHGPRKSSAAQRPTRQT 799
>gi|389745733|gb|EIM86914.1| hypothetical protein STEHIDRAFT_97798 [Stereum hirsutum FP-91666 SS1]
Length = 427
Score = 105 bits (261), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 1891 RKY----CQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNS--DCKLTHKVIPE 1944
RKY C FT G CN+ CPY HD SKIA+C FL+G C +S +C L+H PE
Sbjct: 179 RKYVDKPCARFTTTGSCNR-GLTCPYQHDESKIAICWPFLQGTCPHSADNCPLSHNPTPE 237
Query: 1945 RMPDCSYFL-QGLCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFK 2002
P C +F G C NCP+ H+ V P C F + G+C G +C +H CP F
Sbjct: 238 NTPLCVHFANNGRCNRDNCPFPHIRVGPRTGVCRDFAVLGFCGKGVDCEHQHVRECPDFA 297
Query: 2003 ATGSCALGAKCRLHH 2017
G C C+L H
Sbjct: 298 EKGECTTKG-CKLPH 311
>gi|403167495|ref|XP_003889822.1| hypothetical protein PGTG_21624 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375167055|gb|EHS63319.1| hypothetical protein PGTG_21624 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 924
Score = 104 bits (260), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 104/209 (49%), Gaps = 20/209 (9%)
Query: 1864 PKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCT 1923
P R ++V+A+ AR + +K + C+FF + G C ++ C Y HDP ++A+C+
Sbjct: 352 PLRHSKVIAT--------VARPPVIKKNEQCRFFAKTGAC-RNGLTCVYQHDPLQVAICS 402
Query: 1924 KFLKGLCSNS--DCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNAS-TCEGFL 1980
++L+ CS S C L+HK P M CS+F + C +CPY HV P +S C F
Sbjct: 403 RYLRKKCSYSATSCPLSHKPNPHNMEHCSHFPR--CNKADCPY--PHVKPTSSQICPEFA 458
Query: 1981 K-GYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSRKPKNTHGR 2039
G+C+ G +C ++H CP F G+C+ CRL H +R++ + +H
Sbjct: 459 DLGWCSKGAQCTERHVRECPEFSTKGTCS-NPGCRLRHMINRNHHQNENLEE--STSHQE 515
Query: 2040 YFGSMLVEDSESQTAMSERPTVQNNGNLF 2068
+ D E+ ++ E P + LF
Sbjct: 516 DEDHRMTADDEAGSSDEEAPDTAGSAGLF 544
>gi|328851501|gb|EGG00655.1| hypothetical protein MELLADRAFT_93107 [Melampsora larici-populina
98AG31]
Length = 720
Score = 104 bits (260), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 85/151 (56%), Gaps = 10/151 (6%)
Query: 1879 SLHTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSN--SDCK 1936
++ AR +K + C+FF + G C K C Y H+PS +A+C +FL+ C+N S C
Sbjct: 369 TMKIARPPRMKKEEQCRFFAKTGACRK-GLTCVYQHEPSNVAICPRFLRRTCANPASACP 427
Query: 1937 LTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLK-GYCADGDECRKKHS 1995
L+HK M CS+F + C +CPY HV + ++ C+ F + G+C+ G +C+ +H
Sbjct: 428 LSHKPNAHNMEHCSHFPR--CNKPDCPYPHVETH-TSTVCKDFAELGWCSKGAQCKDRHV 484
Query: 1996 YVCPTFKATGSCALGAKCRLHHPKSRSNGKK 2026
CP F G+C+ + CRL H +R GKK
Sbjct: 485 RECPEFTKDGTCS-NSTCRLPHVINR--GKK 512
>gi|346322469|gb|EGX92068.1| CCCH zinc finger protein [Cordyceps militaris CM01]
Length = 435
Score = 103 bits (258), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 69/120 (57%), Gaps = 5/120 (4%)
Query: 1901 GKCNKDNGKCPYIHDPSKIAVCTKFLK-GLCSNSD-CKLTHKVIPERMPDCSYFLQGLCT 1958
G C K C Y HDP K+A+C FLK G C N + C L+H++ ER+P+C +F +G C+
Sbjct: 257 GSCRK-GPSCRYQHDPHKVAICKDFLKDGRCINGEHCDLSHELTLERVPNCLHFAKGNCS 315
Query: 1959 NKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
N NC Y H P+A CE F +GYC C ++H + CP F TG+C C+L H
Sbjct: 316 NANCQYSHSAALPSAPVCENFGYRGYCDKAATCTERHVFECPAFSNTGTCKTKG-CKLLH 374
>gi|409040962|gb|EKM50448.1| hypothetical protein PHACADRAFT_129648 [Phanerochaete carnosa
HHB-10118-sp]
Length = 260
Score = 103 bits (257), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 72/138 (52%), Gaps = 10/138 (7%)
Query: 1888 ARKRKY----CQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLC--SNSDCKLTHKV 1941
AR+RK C FT G C + CPY HDP+KIA+C FL+G C + S C L+H
Sbjct: 14 ARRRKVVEKPCARFTTTGACTR-GLTCPYQHDPAKIAICWPFLQGNCPHTTSTCPLSHDP 72
Query: 1942 IPERMPDCSYFL-QGLCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCP 1999
P+R P C +F QG CT NCP+ HV V C F + GYC G +C +H CP
Sbjct: 73 TPQRTPLCVHFANQGRCTRPNCPFPHVRVGAREGVCRDFAVLGYCEKGLDCENQHVRECP 132
Query: 2000 TFKATGSCALGAKCRLHH 2017
F G C C+L H
Sbjct: 133 DFAEKGVCNTKG-CKLPH 149
>gi|302686230|ref|XP_003032795.1| hypothetical protein SCHCODRAFT_53855 [Schizophyllum commune H4-8]
gi|300106489|gb|EFI97892.1| hypothetical protein SCHCODRAFT_53855 [Schizophyllum commune H4-8]
Length = 263
Score = 103 bits (256), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 100/209 (47%), Gaps = 15/209 (7%)
Query: 1881 HTARLRLARK--RKY----CQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSD 1934
H L +R+ +KY C F G CN+ C Y HDPSKIA+C FL C NSD
Sbjct: 19 HLITLSYSRRQSKKYSDKPCPRFNMTGSCNR-GLTCIYQHDPSKIAICWNFLYNKCPNSD 77
Query: 1935 --CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECR 1991
C L+H PER P C++F+ G C+ NC + HV++ C F + GYC G +C
Sbjct: 78 ETCPLSHDPTPERTPLCTHFIHGGCSRPNCHFPHVNIGARQGVCRDFAVFGYCEKGLDCD 137
Query: 1992 KKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSRKPKNTHGRYFGSMLVEDSES 2051
++H CP F G+C C+L H + +K + P G ++ S+
Sbjct: 138 QQHVRECPDFAEHGTCT-NKGCKLPHVIRANRNRKPKAEVSPSVIAG---AAVDAAPSKP 193
Query: 2052 QTAMSERPTVQNNGNLFVEGKLVD-YIGL 2079
++ PTV + + G+L D YI L
Sbjct: 194 MDTAADPPTVDASASAAGGGELGDEYISL 222
>gi|336274258|ref|XP_003351883.1| hypothetical protein SMAC_00430 [Sordaria macrospora k-hell]
Length = 444
Score = 103 bits (256), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 66/112 (58%), Gaps = 4/112 (3%)
Query: 1909 KCPYIHDPSKIAVCTKFLK-GLCSNSD-CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRH 1966
+C YIHDP+K+AVC FL+ G C N D C L+H++ ER+P C +F++ CT +C + H
Sbjct: 273 RCRYIHDPAKVAVCKDFLQQGECVNGDSCDLSHELSAERIPTCLHFIKDSCTKPDCKFTH 332
Query: 1967 VHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
V+P A C F L GYC G C +H + CP F TG C C+L H
Sbjct: 333 AKVSPAAPVCREFGLYGYCEKGASCTDRHVFECPDFSNTGVCNTKG-CKLPH 383
>gi|452847322|gb|EME49254.1| hypothetical protein DOTSEDRAFT_40495 [Dothistroma septosporum NZE10]
Length = 406
Score = 102 bits (255), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 108/217 (49%), Gaps = 26/217 (11%)
Query: 1834 NAKKSYIPRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRW---------SLH--- 1881
NAK S R L+I N E+ NG++L+R L + K +W S H
Sbjct: 142 NAKFS---RTLLIDNIEFEVNHNGSKLLRVSGPNTAALETPK-KWTQGPVTFLRSKHGNL 197
Query: 1882 ---TARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLK-GLCSNSD-CK 1936
TA + +K C+ FTR+G C + C HDP+K+A C L+ G CS+ D C
Sbjct: 198 IKATAPTQRPTPKKQCEKFTRYGSCAR-GLSCRDAHDPAKVAYCRDLLQHGKCSSEDACD 256
Query: 1937 LTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNAS-TCEGFLK-GYCADGDECRKKH 1994
++H R+P C++FL+G CTN C Y HV V+P+ + C F G+CA +C K+H
Sbjct: 257 MSHDKTYHRVPACTFFLRGNCTNSACRYVHVDVHPSPTRVCSSFAHLGFCAKSTDCDKRH 316
Query: 1995 SYVCPTFKATGSCALGAK--CRLHHPKSRSNGKKSRR 2029
+ CP + CA K C+L H + +K+ R
Sbjct: 317 VFECPAYAEKRHCADHEKGTCQLPHTEHAVTLRKAAR 353
>gi|342320354|gb|EGU12295.1| Hypothetical Protein RTG_01674 [Rhodotorula glutinis ATCC 204091]
Length = 657
Score = 102 bits (254), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 73/130 (56%), Gaps = 8/130 (6%)
Query: 1892 KYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLC--SNSDCKLTHKVIPERMPDC 1949
K C+FF R G+C++ + CPY+HD KIA+C FL+ C S S C L+H R P C
Sbjct: 329 KLCRFFQRTGQCSRAH-TCPYVHDSHKIAICPLFLRSSCPRSASTCPLSHSPNAHRSPHC 387
Query: 1950 SYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLK-GYCADGDECRKKHSYVCPTFKATGSC 2007
+F CT + CPY HV V+ +A C F++ G+C G+EC K+H C F TG C
Sbjct: 388 LHFPN--CTRGSACPYAHVKVSSDAPVCRDFVELGWCEKGEECDKRHVRECWRFAETGKC 445
Query: 2008 ALGAKCRLHH 2017
+ CR H
Sbjct: 446 EVKG-CREPH 454
>gi|242222895|ref|XP_002477139.1| predicted protein [Postia placenta Mad-698-R]
gi|220723492|gb|EED77661.1| predicted protein [Postia placenta Mad-698-R]
Length = 316
Score = 102 bits (254), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 72/139 (51%), Gaps = 9/139 (6%)
Query: 1886 RLARKRKY---CQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNS--DCKLTHK 1940
R++ KRK C FT G CN+ C Y HDP+KIA+C FL+G C N+ C L+H
Sbjct: 82 RVSSKRKVNKPCARFTTTGACNR-GLTCMYQHDPTKIAICWNFLQGNCPNTAETCALSHD 140
Query: 1941 VIPERMPDCSYFL-QGLCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVC 1998
PER P C +F G C NCP+ HV V C F + GYC G +C K+H C
Sbjct: 141 PTPERTPLCVHFANNGRCHRANCPFPHVRVGKREGVCRDFAVLGYCEKGLDCDKQHVREC 200
Query: 1999 PTFKATGSCALGAKCRLHH 2017
P F G C C+L H
Sbjct: 201 PDFAEKGECTTKG-CKLPH 218
>gi|358060294|dbj|GAA94048.1| hypothetical protein E5Q_00695 [Mixia osmundae IAM 14324]
Length = 440
Score = 100 bits (249), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 124/301 (41%), Gaps = 50/301 (16%)
Query: 1838 SYIPRRLVIGNDEYVRIGNGNQLIRDPKRRARV-----LASEKVRWSL---HTARLRLAR 1889
S P+R I +Y+R GN L+R A V L +++ R R++ +R
Sbjct: 147 SLTPKRASIQGQQYIRTKTGN-LVRADAYAAHVKSQANLKAKRARLDTLVGQLGRVQPSR 205
Query: 1890 KR-------------------KYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLC 1930
R C +T G+C K CPYIHDP+K+++CT+FL C
Sbjct: 206 NRGSTRGKRVPRPVITRQKINSLCPQYTIQGQCTK-GLTCPYIHDPTKVSICTRFLANKC 264
Query: 1931 S-NSDCKLTHKVIPERMPDCSYFLQGLCT-NKNCPYRHVHVNPNASTCEGFLK-GYCADG 1987
C +H RMP C++F + C ++CP+ HV + ++ C F GYC G
Sbjct: 265 ELGESCLHSHSTDAHRMPHCTHFPR--CNRGRDCPFPHVGLPADSPICAPFATLGYCEKG 322
Query: 1988 DECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSRKPKNTHGRYFGSMLVE 2047
CR++H CP F G+C A C+L H R S P T + L+
Sbjct: 323 LACRERHVRECPEFGIKGTCTR-ANCKLPHILRRKGPSTSESIVTPSTTASSAPQAELII 381
Query: 2048 DSESQTAMSERPTVQNNGNLFVEGKLVDYIGLDV---------SDKEAGETNDALHELLD 2098
D + A + + V+ + D G D+ SD AG + L + D
Sbjct: 382 DQSASEASEDEIESE------VDEDMSDASGEDLEEMTSNEHFSDPLAGNEDTILFDDFD 435
Query: 2099 F 2099
F
Sbjct: 436 F 436
>gi|85111349|ref|XP_963894.1| hypothetical protein NCU03048 [Neurospora crassa OR74A]
gi|28925641|gb|EAA34658.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 432
Score = 100 bits (248), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 65/112 (58%), Gaps = 4/112 (3%)
Query: 1909 KCPYIHDPSKIAVCTKFLKGL-CSNSD-CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRH 1966
+C YIHDP+K+A+C FL+ C N D C L+H++ ER P C +F++ CT +C + H
Sbjct: 261 RCRYIHDPAKVAICKDFLQQEECINGDSCDLSHELSAERTPTCLHFIKDSCTKPDCKFTH 320
Query: 1967 VHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
V+P AS C F L GYC G C +H + CP F TG C C+L H
Sbjct: 321 AKVSPAASVCREFGLYGYCEKGASCINRHVFECPDFSNTGVCNTKG-CKLPH 371
>gi|393222216|gb|EJD07700.1| hypothetical protein FOMMEDRAFT_150244 [Fomitiporia mediterranea
MF3/22]
Length = 396
Score = 99.4 bits (246), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 84/174 (48%), Gaps = 20/174 (11%)
Query: 1862 RDPKRRARVLASEKV----RWSLHTAR--LRLARKRK-------YCQFFTRFGKCNKDNG 1908
R P+R + AS + +L R +R+ RK K C F+ G C K
Sbjct: 124 RAPQRPYKSKASRRFPQNNNMTLENGRKPVRVGRKTKSMKYIDKQCPRFSTTGVCTKGR- 182
Query: 1909 KCPYIHDPSKIAVCTKFLKGLCSNS--DCKLTHKVIPERMPDCSYFL-QGLCTN-KNCPY 1964
C Y HDPSKIAVC FL G C N+ C L+H IPER P C +F G C N +C +
Sbjct: 183 TCSYKHDPSKIAVCWPFLSGSCPNTTESCPLSHDPIPERTPLCVHFANNGRCKNGADCLF 242
Query: 1965 RHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
HV V P + C F + GYC G +C +H CP F G C +C+L H
Sbjct: 243 PHVRVGPRSGVCRDFAVLGYCDKGIDCEHQHVRECPDFAEKGECP-NPRCKLPH 295
>gi|336368313|gb|EGN96656.1| hypothetical protein SERLA73DRAFT_140311 [Serpula lacrymans var.
lacrymans S7.3]
Length = 421
Score = 99.4 bits (246), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 70/136 (51%), Gaps = 6/136 (4%)
Query: 1886 RLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSN--SDCKLTHKVIP 1943
RL K C FT G C++ C Y HD +KIA+C FL+G C N + C L+H P
Sbjct: 180 RLKCLDKPCPRFTTTGACSR-GLTCVYQHDANKIAICWNFLQGCCPNDAAFCNLSHDPTP 238
Query: 1944 ERMPDCSYFL-QGLCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTF 2001
ER P C +F G CT CP+ HV V P C F + GYC G +C +H CP F
Sbjct: 239 ERTPLCVHFANNGRCTRDKCPFPHVRVGPRQGVCRDFAVLGYCDKGLDCDMQHVRECPDF 298
Query: 2002 KATGSCALGAKCRLHH 2017
G+C+ C+L H
Sbjct: 299 AEKGTCSTKG-CKLPH 313
>gi|443920041|gb|ELU40043.1| CCCH zinc finger protein [Rhizoctonia solani AG-1 IA]
Length = 1137
Score = 99.0 bits (245), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 80/172 (46%), Gaps = 13/172 (7%)
Query: 1864 PKRRARVLASEKVRWSLHTARL-RLARKRKYCQFFTR--FGKCNKDNGKCPYIHDPSKIA 1920
P R+A V + RW++ L L TR G C N CPY HDP K A
Sbjct: 167 PSRKA-VQILDTYRWAIPPFSLFSLPLSFIIHALLTRMNLGICQNGN-TCPYQHDPQKTA 224
Query: 1921 VCTKFLKGLCSNS--DCKLTHKVIPERMPDCSYFLQ-GLC-TNKNCPYRHVHVNP--NAS 1974
+C +F+ G C N+ C L+H PERMP C +F G C +CPY HV +
Sbjct: 225 ICPRFVSGDCPNTALTCPLSHDPTPERMPLCVHFQNAGRCRLGSSCPYPHVFLGDKRKEG 284
Query: 1975 TCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGK 2025
C F + GYCA G EC + H CP F G CA C+L H S GK
Sbjct: 285 VCRDFAVLGYCARGVECERNHVRECPDFAERGVCATKG-CKLPHVIRASRGK 335
>gi|336465226|gb|EGO53466.1| hypothetical protein NEUTE1DRAFT_55260 [Neurospora tetrasperma FGSC
2508]
Length = 432
Score = 98.2 bits (243), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 64/112 (57%), Gaps = 4/112 (3%)
Query: 1909 KCPYIHDPSKIAVCTKFLKGL-CSNSD-CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRH 1966
+C YIHDP+K+A+C FL+ C N D C L+H++ ER P C +F++ CT +C + H
Sbjct: 261 RCRYIHDPAKVAICKDFLQQEECINGDSCDLSHELSAERTPTCLHFIKDSCTKPDCKFTH 320
Query: 1967 VHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
V+P A C F L GYC G C +H + CP F TG C C+L H
Sbjct: 321 AKVSPAAPVCREFGLYGYCEKGASCTNRHVFECPDFSNTGVCNTKG-CKLPH 371
>gi|350295519|gb|EGZ76496.1| hypothetical protein NEUTE2DRAFT_54638 [Neurospora tetrasperma FGSC
2509]
Length = 432
Score = 97.8 bits (242), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 63/112 (56%), Gaps = 4/112 (3%)
Query: 1909 KCPYIHDPSKIAVCTKFLKGL-CSNSD-CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRH 1966
+C YIHDP+K+A+C FL+ C N D C L+H + ER P C +F++ CT +C + H
Sbjct: 261 RCRYIHDPAKVAICKDFLQQEECINGDSCDLSHDLSAERTPTCLHFIKDSCTKPDCKFTH 320
Query: 1967 VHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
V+P A C F L GYC G C +H + CP F TG C C+L H
Sbjct: 321 AKVSPAAPVCREFGLYGYCEKGASCTNRHVFECPDFSNTGVCNTKG-CKLPH 371
>gi|353234687|emb|CCA66709.1| hypothetical protein PIIN_00389 [Piriformospora indica DSM 11827]
Length = 380
Score = 97.8 bits (242), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 91/178 (51%), Gaps = 8/178 (4%)
Query: 1862 RDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAV 1921
R K R R+ + + + + + A+ K C FF+R G CN+ C Y HDP K+A+
Sbjct: 129 RGYKPRGRLHPNMSLVLNKINKQTKKAKLDKQCPFFSRTGLCNRGK-SCRYQHDPEKVAI 187
Query: 1922 CTKFLKGLCSNS--DCKLTHKVIPERMPDCSYFL-QGLCTNKN-CPYRHVHVNPNASTCE 1977
C +FL G C +S +C L+H R+P C +F G C N + C Y HV V S C
Sbjct: 188 CPRFLTGDCPSSAENCLLSHSPTLNRVPPCVHFQNNGRCKNGDKCVYPHVRVGVKHSVCR 247
Query: 1978 GF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSRKPK 2034
F + GYC G +C + H CP F TG+C +C+L H R+N KK+ PK
Sbjct: 248 DFAVLGYCEKGIDCEEAHVRECPDFAETGTCK-NPRCKLPH-VIRANRKKAVAPDPPK 303
>gi|190344296|gb|EDK35946.2| hypothetical protein PGUG_00044 [Meyerozyma guilliermondii ATCC 6260]
Length = 423
Score = 97.8 bits (242), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 108/236 (45%), Gaps = 44/236 (18%)
Query: 1829 PTLEKNAKKSYIPRRLVIGNDEYVRIGNGNQLIR----DPKRRARVLASEKVRW--SLHT 1882
P ++KN K+ R+ I + + G GN+L+ P +++ +++ +
Sbjct: 113 PRIDKNKTKTDHCDRIAISDQIFAVCGGGNKLVPLTVPPPDSEGQIIMWNSIKYIRKKNG 172
Query: 1883 ARLRLARKRKY-----------------CQFFTRFGK---------------CNKDNGKC 1910
R+ + +Y C+++TR GK C K + C
Sbjct: 173 TFRRVGKSAEYVFSSSQSGNTNVSTSEDCRYYTRIGKYLPNHISLALLTSGICKK-SSHC 231
Query: 1911 PYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVH-- 1968
Y+HDPS I C ++L+ C+N++C L H+ P C Y+ QG CT+ NC + H
Sbjct: 232 KYLHDPSHIRACRQYLQNKCTNTNCLLNHEPDEHNTPICKYYKQGSCTSPNCHFLHSEKP 291
Query: 1969 VNPNA--STCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSR 2021
+P++ C F + G+C G +C +H + CP F+ +G+C G C L HP ++
Sbjct: 292 QDPDSYICLCRPFSVGGWCPRGLKCPFRHDFECPDFEESGTCPRGFSCFLAHPVTK 347
>gi|395331751|gb|EJF64131.1| hypothetical protein DICSQDRAFT_153242 [Dichomitus squalens LYAD-421
SS1]
Length = 252
Score = 97.4 bits (241), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 72/140 (51%), Gaps = 10/140 (7%)
Query: 1886 RLARKRKY----CQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNS--DCKLTH 1939
RL KRKY C FT G CN+ C Y HDPSKIA+C FL+ C N+ C L+H
Sbjct: 13 RLNPKRKYSDKQCPRFTTTGSCNR-GLTCFYQHDPSKIAICWPFLQDKCPNTAETCPLSH 71
Query: 1940 KVIPERMPDCSYFL-QGLCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYV 1997
P+R P C +F G C NCP+ HV V C F + GYC G +C K+H
Sbjct: 72 DPTPQRTPLCVHFANNGRCNRPNCPFPHVRVGQREGICRDFAVLGYCEKGLDCDKQHVRE 131
Query: 1998 CPTFKATGSCALGAKCRLHH 2017
CP F G+C C+L H
Sbjct: 132 CPDFAEKGNCTTMG-CKLPH 150
>gi|146421443|ref|XP_001486667.1| hypothetical protein PGUG_00044 [Meyerozyma guilliermondii ATCC 6260]
Length = 423
Score = 96.7 bits (239), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 107/236 (45%), Gaps = 44/236 (18%)
Query: 1829 PTLEKNAKKSYIPRRLVIGNDEYVRIGNGNQLIR----DPKRRARVLASEKVRW--SLHT 1882
P ++KN K+ R+ I + + G GN+L+ P +++ +++ +
Sbjct: 113 PRIDKNKTKTDHCDRIAISDQIFAVCGGGNKLVPLTVPPPDSEGQIIMWNSIKYIRKKNG 172
Query: 1883 ARLRLARKRKY-----------------CQFFTRFGK---------------CNKDNGKC 1910
R+ + +Y C+++TR GK C K + C
Sbjct: 173 TFRRVGKSAEYVFSSSQSGNTNVSTSEDCRYYTRIGKYLPNHISLALLTSGICKK-SSHC 231
Query: 1911 PYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVH-- 1968
Y+HDPS I C ++L+ C+N++C L H+ P C Y+ QG CT+ NC + H
Sbjct: 232 KYLHDPSHIRACRQYLQNKCTNTNCLLNHEPDEHNTPICKYYKQGSCTSPNCHFLHSEKP 291
Query: 1969 VNPN--ASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSR 2021
+P+ C F + G+C G +C +H + CP F+ +G+C G C L HP ++
Sbjct: 292 QDPDLYICLCRPFSVGGWCPRGLKCPFRHDFECPDFEESGTCPRGFSCFLAHPVTK 347
>gi|393240417|gb|EJD47943.1| hypothetical protein AURDEDRAFT_113216 [Auricularia delicata
TFB-10046 SS5]
Length = 338
Score = 96.7 bits (239), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 73/134 (54%), Gaps = 7/134 (5%)
Query: 1889 RKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCS--NSDCKLTHKVIPERM 1946
R RK C+ F+ G C + CPY HDP+K+A+C +FL+ C S C L+H PER+
Sbjct: 123 RPRKQCRHFSLTGVCARAR-TCPYEHDPNKVAICPRFLQRECPLDASTCPLSHDPTPERV 181
Query: 1947 PDCSYFL-QGLCTN-KNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKA 2003
P C +F G C N +C Y H V P C F + GYC G +C K+H CP F
Sbjct: 182 PLCVHFANNGRCKNGSSCLYPHFKVGPREGVCRDFAVLGYCEKGIDCDKQHIRECPDFAE 241
Query: 2004 TGSCALGAKCRLHH 2017
+G CA +C+L H
Sbjct: 242 SGRCA-NRQCKLPH 254
>gi|448083154|ref|XP_004195322.1| Piso0_005874 [Millerozyma farinosa CBS 7064]
gi|359376744|emb|CCE87326.1| Piso0_005874 [Millerozyma farinosa CBS 7064]
Length = 247
Score = 95.9 bits (237), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 67/133 (50%), Gaps = 8/133 (6%)
Query: 1896 FFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQG 1955
F R G C+K +C YIHD I +C +L +C N +C L+H P C YFL+
Sbjct: 5 FLRRTGFCSK-GSQCKYIHDKQSIKLCRSYLSNVCYNKNCLLSHTPNQFNAPLCRYFLEN 63
Query: 1956 LCTNKNCPYRHVHVNP------NASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCA 2008
CTN C + H N N S C F + G+CA G +C H ++CP F+ G C
Sbjct: 64 KCTNTKCQFIHSKPNKYDEKGVNISVCRPFAISGFCARGLKCPFLHLFICPDFEEEGVCP 123
Query: 2009 LGAKCRLHHPKSR 2021
G C L HPK++
Sbjct: 124 RGKTCSLSHPKTQ 136
>gi|448087790|ref|XP_004196412.1| Piso0_005874 [Millerozyma farinosa CBS 7064]
gi|359377834|emb|CCE86217.1| Piso0_005874 [Millerozyma farinosa CBS 7064]
Length = 247
Score = 95.5 bits (236), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 67/133 (50%), Gaps = 8/133 (6%)
Query: 1896 FFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQG 1955
F R G C+K +C YIHD I +C +L +C N +C L+H P C YFL+
Sbjct: 5 FLRRTGFCSK-GSQCKYIHDKQSIKLCRSYLSNICYNKNCLLSHTPNQFNAPLCRYFLEN 63
Query: 1956 LCTNKNC------PYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCA 2008
CTN C P R+ N S C F + G+CA G +C H ++CP F+ G C
Sbjct: 64 KCTNTKCQFIHSKPDRYEEKGVNISVCRPFAISGFCARGLKCPFLHLFICPDFEEEGVCP 123
Query: 2009 LGAKCRLHHPKSR 2021
G C L HPK++
Sbjct: 124 RGKTCSLSHPKTQ 136
>gi|164657462|ref|XP_001729857.1| hypothetical protein MGL_2843 [Malassezia globosa CBS 7966]
gi|159103751|gb|EDP42643.1| hypothetical protein MGL_2843 [Malassezia globosa CBS 7966]
Length = 500
Score = 94.4 bits (233), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 93/202 (46%), Gaps = 31/202 (15%)
Query: 1840 IPRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASE-------------KVRWSLHTAR-- 1884
IPR+ I +VR NGN + +A VL K+ L A
Sbjct: 171 IPRQTSINGQAFVRTKNGNLI-----NKALVLERREARARQERMQRLAKLGRKLGHAHKQ 225
Query: 1885 ---LRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLK---GLCSNSDCKLT 1938
L A+ + C ++TR G C + +CP+IHD + A+C LK + C L+
Sbjct: 226 QRALERAKTPQLCTYYTRTGTCRRGT-QCPFIHDDQRKALCPGVLKPSGCVLPPGTCLLS 284
Query: 1939 HKVIPERMPDCSYFLQ-GLCTNKN-CPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHS 1995
H P+ +P C +FL+ C N + C + H V +A C F L G+C GD+C +H+
Sbjct: 285 HTRCPQNVPHCVHFLRLHSCRNGDACAFTHAQVAHDAPVCRAFALLGWCDQGDKCLHRHA 344
Query: 1996 YVCPTFKATGSCALGAKCRLHH 2017
CP F A G+C A CRL H
Sbjct: 345 KECPDFTAKGTCTDPA-CRLAH 365
>gi|71022525|ref|XP_761492.1| hypothetical protein UM05345.1 [Ustilago maydis 521]
gi|46101361|gb|EAK86594.1| hypothetical protein UM05345.1 [Ustilago maydis 521]
Length = 673
Score = 94.0 bits (232), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 96/208 (46%), Gaps = 32/208 (15%)
Query: 1840 IPRRLVIGNDEYVRIGNGNQLIRD--PKRRARVLASEKV--------------------R 1877
+P + I +Y+R GN + D KR+A+ A K+ R
Sbjct: 268 VPLKTSINGQDYIRTKRGNLISADLLAKRKAQREAQAKMGRLDKMVGQISAMQATRNSSR 327
Query: 1878 WSLHTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGL-CS--NSD 1934
+ RL +++ R C FF + G+C K CPY+HD SKIA+C K L+ C+
Sbjct: 328 KPGVSRRLDVSKARTLCTFFNKTGQC-KRGLSCPYLHDSSKIALCPKVLRPTGCTLPKGT 386
Query: 1935 CKLTHKVIPERMPDCSYFLQGL-CTN-KNCPYRHVHVNPNAST--CEGFLK-GYCADGDE 1989
C L+H ER+P C ++L+ C N +C Y H + T C F G+C G +
Sbjct: 387 CPLSHTPRAERVPHCVHYLRSRNCRNGADCLYTHADLKDGVKTNICRDFSDYGWCGRGKD 446
Query: 1990 CRKKHSYVCPTFKATGSCALGAKCRLHH 2017
C ++H+Y CP F G C C+L H
Sbjct: 447 CEQRHTYECPEFVEKGKCERKG-CKLVH 473
>gi|336381124|gb|EGO22276.1| hypothetical protein SERLADRAFT_472853 [Serpula lacrymans var.
lacrymans S7.9]
Length = 414
Score = 94.0 bits (232), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 64/125 (51%), Gaps = 5/125 (4%)
Query: 1886 RLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSN--SDCKLTHKVIP 1943
RL K C FT G C++ C Y HD +KIA+C FL+G C N + C L+H P
Sbjct: 180 RLKCLDKPCPRFTTTGACSR-GLTCVYQHDANKIAICWNFLQGCCPNDAAFCNLSHDPTP 238
Query: 1944 ERMPDCSYFL-QGLCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTF 2001
ER P C +F G CT CP+ HV V P C F + GYC G +C +H CP F
Sbjct: 239 ERTPLCVHFANNGRCTRDKCPFPHVRVGPRQGVCRDFAVLGYCDKGLDCDMQHVRECPDF 298
Query: 2002 KATGS 2006
G+
Sbjct: 299 AEKGT 303
>gi|401880929|gb|EJT45238.1| hypothetical protein A1Q1_06376 [Trichosporon asahii var. asahii CBS
2479]
Length = 510
Score = 93.6 bits (231), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 71/137 (51%), Gaps = 6/137 (4%)
Query: 1886 RLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSD-CKLTHKVIPE 1944
R + ++ C+++T+ G+C + CPY H P ++A+C +FLKG C D C L+H
Sbjct: 253 RAEQAKRPCRYYTKTGRCER-ALTCPYQHIPDRLAICHQFLKGTCQLGDNCPLSHTPSAH 311
Query: 1945 RMPDCSYFLQGLCTNKN--CPYRHVHVNPNASTCEGFLK-GYC-ADGDECRKKHSYVCPT 2000
P CS F K C Y HV V +A CE F + G+C C + H + CP
Sbjct: 312 NTPSCSRFQATSSCYKGDKCLYPHVRVADDAPVCEAFAREGWCDTPAGTCPELHIWECPE 371
Query: 2001 FKATGSCALGAKCRLHH 2017
+ A G+C+ G KC L H
Sbjct: 372 WHAKGTCSRGRKCGLRH 388
>gi|443898042|dbj|GAC75380.1| C3H1-type Zn-finger protein [Pseudozyma antarctica T-34]
Length = 609
Score = 93.2 bits (230), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 95/205 (46%), Gaps = 27/205 (13%)
Query: 1838 SYIPRRLVIGNDEYVRIGNGNQLIRD--PKRRAR---------------VLASEKVRWSL 1880
S +P + I EY+R GN + + KRRA+ + A+ S
Sbjct: 233 SAVPLKTSINGQEYIRTKRGNLISAELLAKRRAQAKMGRLDKMVGQISAMQATRNAGRSK 292
Query: 1881 HTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGL-CS--NSDCKL 1937
+ + + + R C FF + G+C K CPY HD SKIA+C K L+ C+ C L
Sbjct: 293 RSGAVDVQKSRTLCTFFNKTGQC-KRGLSCPYRHDSSKIALCPKVLRAAGCTLPKGTCPL 351
Query: 1938 THKVIPERMPDCSYFLQGL-CTNKN-CPYRHVHVNPNAST--CEGFLK-GYCADGDECRK 1992
+H ER+P C ++L+ C N C Y H + +T C F + G+C G C +
Sbjct: 352 SHTPRAERVPHCVHYLRSRHCRNGTACLYTHADLVDGLATKICRDFSEYGWCERGASCEQ 411
Query: 1993 KHSYVCPTFKATGSCALGAKCRLHH 2017
+H+Y CP F GSC C+L H
Sbjct: 412 RHTYECPDFVENGSCQRKG-CKLLH 435
>gi|406697187|gb|EKD00453.1| hypothetical protein A1Q2_05290 [Trichosporon asahii var. asahii CBS
8904]
Length = 570
Score = 92.8 bits (229), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 71/137 (51%), Gaps = 6/137 (4%)
Query: 1886 RLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSD-CKLTHKVIPE 1944
R + ++ C+++T+ G+C + CPY H P ++A+C +FLKG C D C L+H
Sbjct: 315 RAEQAKRPCRYYTKTGRCERAL-TCPYQHIPDRLAICHQFLKGTCQLGDNCPLSHTPSAH 373
Query: 1945 RMPDCSYFLQGLCTNKN--CPYRHVHVNPNASTCEGFLK-GYC-ADGDECRKKHSYVCPT 2000
P CS F K C Y HV V +A CE F + G+C C + H + CP
Sbjct: 374 NTPSCSRFQATSSCYKGDKCIYPHVRVADDAPVCEAFAREGWCDKPAGTCPELHFWECPE 433
Query: 2001 FKATGSCALGAKCRLHH 2017
+ A G+C+ G KC L H
Sbjct: 434 WHAKGTCSRGRKCGLRH 450
>gi|149246628|ref|XP_001527739.1| hypothetical protein LELG_00259 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146447693|gb|EDK42081.1| hypothetical protein LELG_00259 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 545
Score = 92.0 bits (227), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 68/140 (48%), Gaps = 13/140 (9%)
Query: 1888 ARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLC-SNSDCKLTHKVIPERM 1946
R + C+++TR G C + C Y HD KI +C FL C NS C L+H+
Sbjct: 227 TRSKPNCRYYTRTGICQR-GASCNYFHDQLKIKICPHFLNDKCIGNSMCLLSHRPNEHNT 285
Query: 1947 PDCSYFLQGLCTNKNCPYRHVHVNP--------NASTCEGF-LKGYCADGDECRKKHSYV 1997
P C YFLQG C+N C R++H P C F + G+C G EC H +
Sbjct: 286 PMCRYFLQGNCSNTRC--RYMHSTPPHFKDPSCEVWVCRPFAIGGWCQRGRECPFMHIWN 343
Query: 1998 CPTFKATGSCALGAKCRLHH 2017
CP F+ G C ++C L+H
Sbjct: 344 CPDFEEDGECVQRSECLLNH 363
>gi|307211396|gb|EFN87523.1| Zinc finger CCCH domain-containing protein 3 [Harpegnathos saltator]
Length = 200
Score = 92.0 bits (227), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 46/78 (58%)
Query: 1946 MPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATG 2005
MP C YFL G CT CPY HV V+ N S C FL+GYC G+EC+++H Y+CP F G
Sbjct: 1 MPTCKYFLDGCCTRDACPYLHVKVSSNTSICIDFLQGYCVKGNECQRRHEYLCPEFDKRG 60
Query: 2006 SCALGAKCRLHHPKSRSN 2023
C+ G C H SN
Sbjct: 61 ICSKGEYCVYPHKSHTSN 78
>gi|313236853|emb|CBY12104.1| unnamed protein product [Oikopleura dioica]
gi|313240029|emb|CBY32388.1| unnamed protein product [Oikopleura dioica]
Length = 286
Score = 91.7 bits (226), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 64/106 (60%), Gaps = 3/106 (2%)
Query: 1891 RKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLK-GLCSNSDCKLTHKVIPERMPDC 1949
R YC++F G C +++ C + HD S++ +C +FLK G C +S+CKL H P M C
Sbjct: 58 RVYCRYFNATGIC-RNHKFCKFEHDFSRVKICPQFLKRGECDHSNCKLRHTSDPHTMEHC 116
Query: 1950 SYFLQGLCTN-KNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
+F++ CT KNCP+ HV V NA C F +GYC G EC+ +H
Sbjct: 117 VHFIKSSCTKGKNCPFPHVKVAENARVCINFQQGYCQKGLECKLRH 162
>gi|194216707|ref|XP_001493296.2| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein-like [Equus caballus]
Length = 198
Score = 91.7 bits (226), Expect = 4e-15, Method: Composition-based stats.
Identities = 51/133 (38%), Positives = 70/133 (52%), Gaps = 10/133 (7%)
Query: 1894 CQFFTRFGKCNKDNGK-CPYIHDP-SKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCS 1950
C FF + G C K GK CP+ HD K+ VC +L+GLC D CK H+ RMP+C
Sbjct: 41 CNFFAK-GLCEK--GKLCPFRHDRGDKMVVCKHWLRGLCKKGDQCKFLHQYDATRMPECY 97
Query: 1951 YFLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSC 2007
+F + G C NK CP+ HV C + +G+C DG C+ +H +C + A G C
Sbjct: 98 FFSKFGDCNNKECPFLHVKPAFKTRDCPWYDQGFCKDGPLCKYRHVRRTLCINYLA-GFC 156
Query: 2008 ALGAKCRLHHPKS 2020
G KC+ H +
Sbjct: 157 PEGPKCQFAHSST 169
Score = 54.7 bits (130), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 32/109 (29%)
Query: 1888 ARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMP 1947
A + C FF++FG CN N +CP++H K A T+
Sbjct: 90 ATRMPECYFFSKFGDCN--NKECPFLH--VKPAFKTR----------------------- 122
Query: 1948 DCSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS 1995
DC ++ QG C + C YRHV + C +L G+C +G +C+ HS
Sbjct: 123 DCPWYDQGFCKDGPLCKYRHVR----RTLCINYLAGFCPEGPKCQFAHS 167
>gi|388856515|emb|CCF49821.1| uncharacterized protein [Ustilago hordei]
Length = 681
Score = 91.3 bits (225), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 94/211 (44%), Gaps = 33/211 (15%)
Query: 1838 SYIPRRLVIGNDEYVRIGNGNQLIRD--PKRRARVLASEKVRW---------SLHTAR-- 1884
+ +P + I +Y+R GN + D KRRA+ A K+ ++ R
Sbjct: 257 AVVPLKTSINGQDYIRTKRGNLISADLLAKRRAQREAQAKMGRLDRMVGQISAIQATRNS 316
Query: 1885 ---------LRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLK-GLCS--N 1932
L + R C FF + G+C K CPY+HD SKIA+C K L C+
Sbjct: 317 SSRTKPSRTLDAKKARTLCTFFNKTGQC-KRGLSCPYLHDSSKIALCPKVLHPSGCTLLK 375
Query: 1933 SDCKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRH---VHVNPNASTCEGFLK-GYCAD 1986
C L+H ER+P C ++L+ G C N K C Y H + C F G+C
Sbjct: 376 GTCPLSHTPRAERVPHCVHYLRAGKCRNGKQCFYTHSDKLKDGTGTKICRNFSDYGWCER 435
Query: 1987 GDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
G +C ++H+Y CP F G C C+L H
Sbjct: 436 GKDCEERHTYECPDFVEKGKCERKG-CKLVH 465
>gi|320582100|gb|EFW96318.1| mRNA 3'-end-processing protein, putative [Ogataea parapolymorpha
DL-1]
Length = 219
Score = 90.1 bits (222), Expect = 1e-14, Method: Composition-based stats.
Identities = 54/139 (38%), Positives = 74/139 (53%), Gaps = 13/139 (9%)
Query: 1891 RKYCQFFTRFGKCNKDNGKCPYIHDPSKI----AVCTKFLKGLCS-NSDCKLTHKVIPER 1945
R C+F+ + GKC N C H PSKI VC +L+GLC DC H+ +R
Sbjct: 40 RPICEFWLQSGKCPNGN-DCENKH-PSKIFNNKIVCKYWLRGLCKMGDDCDFLHEYNLQR 97
Query: 1946 MPDCSYFLQ-GLCTNK-NCPYRHVHVNPNASTCEGFLK-GYCADGDECRKKH--SYVCPT 2000
MP+C+Y+ Q G+CT C Y HV + C + GYC DG +C+++H +CP
Sbjct: 98 MPECAYYSQNGVCTQSPECIYLHVDPQSKIAECYNYSNLGYCPDGPKCQRRHVRKVMCPL 157
Query: 2001 FKATGSCALGAKCRLHHPK 2019
+ TG C G +C L HPK
Sbjct: 158 Y-LTGFCPKGPECELSHPK 175
>gi|426346925|ref|XP_004041119.1| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein [Gorilla gorilla gorilla]
Length = 179
Score = 90.1 bits (222), Expect = 1e-14, Method: Composition-based stats.
Identities = 49/128 (38%), Positives = 70/128 (54%), Gaps = 10/128 (7%)
Query: 1894 CQFFTRFGKCNKDNGK-CPYIHDP-SKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCS 1950
C FFT+ G C K GK CP+ HD K+ VC +L+GLC D CK H+ RMP+C
Sbjct: 41 CNFFTK-GLCEK--GKLCPFRHDRGEKMVVCKHWLRGLCKKGDHCKFLHQYDLTRMPECY 97
Query: 1951 YFLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSC 2007
++ + G C+NK CP+ HV + C + +G+C DG C+ +H +C + G C
Sbjct: 98 FYSKFGDCSNKECPFLHVKPAFKSQDCPWYDQGFCKDGPLCKYRHVPRIMCLNY-LVGFC 156
Query: 2008 ALGAKCRL 2015
G KC+
Sbjct: 157 PEGPKCQF 164
>gi|355568881|gb|EHH25162.1| hypothetical protein EGK_08934 [Macaca mulatta]
gi|355754343|gb|EHH58308.1| hypothetical protein EGM_08126 [Macaca fascicularis]
Length = 179
Score = 90.1 bits (222), Expect = 1e-14, Method: Composition-based stats.
Identities = 49/128 (38%), Positives = 69/128 (53%), Gaps = 10/128 (7%)
Query: 1894 CQFFTRFGKCNKDNGK-CPYIHDP-SKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCS 1950
C FF + G C K GK CP+ HD K+ VC +L+GLC D CK H+ RMP+C
Sbjct: 41 CNFFAK-GLCEK--GKLCPFRHDRGEKMVVCKHWLRGLCKKGDHCKFLHQYDITRMPECY 97
Query: 1951 YFLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSC 2007
++ + G C+NK CP+ HV + C + +G+C DG C+ +H +C + G C
Sbjct: 98 FYSKFGDCSNKECPFLHVKPAFKSQDCPWYDQGFCKDGPLCKYRHVPRIMCLNY-LVGFC 156
Query: 2008 ALGAKCRL 2015
G KCR
Sbjct: 157 PEGPKCRF 164
>gi|332261216|ref|XP_003279670.1| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein [Nomascus leucogenys]
Length = 179
Score = 90.1 bits (222), Expect = 1e-14, Method: Composition-based stats.
Identities = 49/128 (38%), Positives = 70/128 (54%), Gaps = 10/128 (7%)
Query: 1894 CQFFTRFGKCNKDNGK-CPYIHDP-SKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCS 1950
C FFT+ G C K GK CP+ HD K+ VC +L+GLC D CK H+ RMP+C
Sbjct: 41 CNFFTK-GLCEK--GKLCPFRHDRGEKMVVCKHWLRGLCKKGDHCKFLHQYDLTRMPECY 97
Query: 1951 YFLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSC 2007
++ + G C+NK CP+ HV + C + +G+C DG C+ +H +C + G C
Sbjct: 98 FYSKFGDCSNKECPFLHVKPAFKSQDCPWYDQGFCKDGPLCKYRHVPRIMCLNY-LVGFC 156
Query: 2008 ALGAKCRL 2015
G KC+
Sbjct: 157 PEGPKCQF 164
>gi|297701675|ref|XP_002827828.1| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein [Pongo abelii]
Length = 179
Score = 90.1 bits (222), Expect = 1e-14, Method: Composition-based stats.
Identities = 49/128 (38%), Positives = 70/128 (54%), Gaps = 10/128 (7%)
Query: 1894 CQFFTRFGKCNKDNGK-CPYIHDP-SKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCS 1950
C FFT+ G C K GK CP+ HD K+ VC +L+GLC D CK H+ RMP+C
Sbjct: 41 CNFFTK-GLCEK--GKLCPFRHDRGEKMVVCKHWLRGLCKKGDHCKFLHQYDLTRMPECY 97
Query: 1951 YFLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSC 2007
++ + G C+NK CP+ HV + C + +G+C DG C+ +H +C + G C
Sbjct: 98 FYSKFGDCSNKECPFLHVKPAFKSQDCPWYDQGFCKDGPLCKYRHVPRIMCLNY-LVGFC 156
Query: 2008 ALGAKCRL 2015
G KC+
Sbjct: 157 PEGPKCQF 164
>gi|343426595|emb|CBQ70124.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 656
Score = 89.7 bits (221), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 99/211 (46%), Gaps = 35/211 (16%)
Query: 1840 IPRRLVIGNDEYVRIGNGNQLIRD--PKRRARVLASEKV--------------------- 1876
+P + I +Y+R GN + + KR+A+ A+ K+
Sbjct: 253 VPLKTSINGQDYIRTKRGNLISAELLAKRKAQREANAKMGRLDKMVGQISAMQATRNASA 312
Query: 1877 RWSLHTAR-LRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLK-GLCS--N 1932
R + +R L + + R C FF + G+C K CPY+HD +KIA+C K L+ C+
Sbjct: 313 RATKAGSRTLDVKKARTLCTFFNKTGQC-KRGLSCPYLHDSAKIALCPKVLRPAGCTLPK 371
Query: 1933 SDCKLTHKVIPERMPDCSYFL-QGLCTNKN-CPYRH---VHVNPNASTCEGFLK-GYCAD 1986
C L+H ER+P C ++L G+C N + C Y H + + + C F G+C
Sbjct: 372 GTCPLSHTPRAERVPHCVHYLCSGMCRNGDECVYTHSDKLGAGLSTTICREFSDYGWCER 431
Query: 1987 GDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
G +C ++H+Y CP F G C C+L H
Sbjct: 432 GKDCAQRHTYECPDFVEKGKCDRKG-CKLVH 461
>gi|402900921|ref|XP_003913409.1| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein [Papio anubis]
Length = 179
Score = 89.7 bits (221), Expect = 2e-14, Method: Composition-based stats.
Identities = 49/128 (38%), Positives = 69/128 (53%), Gaps = 10/128 (7%)
Query: 1894 CQFFTRFGKCNKDNGK-CPYIHDP-SKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCS 1950
C FF + G C K GK CP+ HD K+ VC +L+GLC D CK H+ RMP+C
Sbjct: 41 CNFFAK-GLCEK--GKLCPFRHDRGEKMVVCKHWLRGLCKKGDHCKFLHQYDITRMPECY 97
Query: 1951 YFLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSC 2007
++ + G C+NK CP+ HV + C + +G+C DG C+ +H +C + G C
Sbjct: 98 FYSKFGDCSNKECPFLHVKPAFKSQDCPWYDQGFCKDGPLCKYRHVPRIMCLNY-LVGFC 156
Query: 2008 ALGAKCRL 2015
G KCR
Sbjct: 157 PEGPKCRF 164
>gi|9711035|dbj|BAB07796.1| no arches [Danio rerio]
Length = 190
Score = 89.7 bits (221), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C++F R C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEYFMR-AACMK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G +CR +H+ +C + G C
Sbjct: 99 YTKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPDCRHRHTRRVICVNY-LVGFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGKSCKFMHPR 168
Score = 50.8 bits (120), Expect = 0.009, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 10/81 (12%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DP-SKIAVCTKFLKGLCSNS-DCKLTHKVIPERM 1946
K C F+T+FG+C+ N +CP++H DP SKI C + +G C + DC+ H R
Sbjct: 92 KMPECYFYTKFGECS--NKECPFLHIDPESKIKDCPWYDRGFCKHGPDCRHRHT----RR 145
Query: 1947 PDCSYFLQGLC-TNKNCPYRH 1966
C +L G C K+C + H
Sbjct: 146 VICVNYLVGFCPEGKSCKFMH 166
>gi|50556018|ref|XP_505417.1| YALI0F14531p [Yarrowia lipolytica]
gi|49651287|emb|CAG78226.1| YALI0F14531p [Yarrowia lipolytica CLIB122]
Length = 367
Score = 89.7 bits (221), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFL 1953
C+FFT+ G C + +C H P ++A C +L+G CS S+C L+H+ P+C +F
Sbjct: 186 CKFFTKSGVCTRP--RCKRQHTPGRVAACKYYLRGQCSTSNCPLSHEPSAHNSPNCRHFA 243
Query: 1954 QGLCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKH 1994
GLCTN+NC Y HV N +A C F G+C G +C +H
Sbjct: 244 HGLCTNQNCRYSHVKHNDDAPYCFSFNDSGWCDRGKDCPDRH 285
>gi|150864463|ref|XP_001383287.2| hypothetical protein PICST_43550 [Scheffersomyces stipitis CBS 6054]
gi|149385719|gb|ABN65258.2| predicted protein, partial [Scheffersomyces stipitis CBS 6054]
Length = 238
Score = 89.0 bits (219), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 90/190 (47%), Gaps = 14/190 (7%)
Query: 1909 KCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVH 1968
KC YIH+ S+I VC + L G C+N +C H + P C Y+++G CTN C + H H
Sbjct: 7 KCKYIHNRSRIRVCQQNLVGKCTNHNCLFCHDINEFNTPVCRYYIEGKCTNSACKFMH-H 65
Query: 1969 VNPN-------ASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKS 2020
P+ C F + G+C+ G +C H + CP F+ G+C G C L HP
Sbjct: 66 KPPHYGELGYEVWVCRPFAVGGWCSRGQQCPFIHLFNCPDFEEDGNCPRGKSCYLAHP-- 123
Query: 2021 RSNGKKSRRSRKPKNTHGRYFGSMLVEDSESQTAMSERPTVQNNGNLFV-EGKLVD-YIG 2078
+ + P T+ R G +V D + + + TV + L EGK D YI
Sbjct: 124 -TTIRTQELIETPMTTYVREDGDDIVVDEKEKKILINSYTVDPDVLLHSREGKKYDFYID 182
Query: 2079 LDVSDKEAGE 2088
+D++ G+
Sbjct: 183 QKAADEKNGD 192
>gi|354466607|ref|XP_003495765.1| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein-like [Cricetulus griseus]
Length = 193
Score = 89.0 bits (219), Expect = 3e-14, Method: Composition-based stats.
Identities = 56/149 (37%), Positives = 76/149 (51%), Gaps = 14/149 (9%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDP-SKIAVCTKFLKGLCSNSDC-KLTHKVIPERMPDCSY 1951
C FF + G C K CP H+ KI VC +L+GLC DC H+ +RMP C +
Sbjct: 41 CNFFAK-GLCEKGT-LCPLRHEKGEKIVVCKHWLRGLCRKGDCCNFLHQYDIDRMPVCYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCAD-GDECRKKHSY--VCPTFKATGSC 2007
+ G C+NK+C + HV PNA C + +G+C D G C+ H + +C + TG C
Sbjct: 99 HSKFGNCSNKDCSFLHVKPAPNAQDCPWYDRGFCKDVGPLCKYHHVHQVMCLNY-FTGFC 157
Query: 2008 ALGAKCRLHHPKSR-----SNGKKSRRSR 2031
G KC+ HPK SN KK+ R
Sbjct: 158 PKGPKCQFGHPKMSQVLHPSNVKKAHALR 186
>gi|432870757|ref|XP_004071833.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Oryzias latipes]
Length = 240
Score = 88.6 bits (218), Expect = 4e-14, Method: Composition-based stats.
Identities = 44/131 (33%), Positives = 69/131 (52%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + G C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFMK-GTCMK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G +CR +H+ +C + G C
Sbjct: 99 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPDCRHRHTRRVICVNY-LVGFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGKSCKFMHPR 168
Score = 47.8 bits (112), Expect = 0.067, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 10/81 (12%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DP-SKIAVCTKFLKGLCSNS-DCKLTHKVIPERM 1946
K C F+++FG+C+ N +CP++H DP SKI C + +G C + DC+ H R
Sbjct: 92 KMPECYFYSKFGECS--NKECPFLHIDPESKIKDCPWYDRGFCKHGPDCRHRHT----RR 145
Query: 1947 PDCSYFLQGLC-TNKNCPYRH 1966
C +L G C K+C + H
Sbjct: 146 VICVNYLVGFCPEGKSCKFMH 166
>gi|391333788|ref|XP_003741292.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Metaseiulus occidentalis]
Length = 269
Score = 88.6 bits (218), Expect = 4e-14, Method: Composition-based stats.
Identities = 45/131 (34%), Positives = 69/131 (52%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C F+ R GKC D CP+ H + VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CTFYMR-GKCTMD-ASCPFRHIKGDRTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + C+NK CP+ H+ + C + +G+C G CR +H+ VC ++ G C
Sbjct: 99 YSRFNACSNKECPFLHIDPDSKIKDCPWYDRGFCRHGPTCRHRHTRRVVCISY-LCGFCP 157
Query: 2009 LGAKCRLHHPK 2019
G KC+ HPK
Sbjct: 158 DGPKCKFVHPK 168
>gi|348511281|ref|XP_003443173.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Oreochromis niloticus]
Length = 265
Score = 88.2 bits (217), Expect = 5e-14, Method: Composition-based stats.
Identities = 56/190 (29%), Positives = 88/190 (46%), Gaps = 19/190 (10%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF R C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFMR-AACQK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G +CR +H+ +C + G C
Sbjct: 99 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPDCRHRHTRRVICVNY-LVGFCP 157
Query: 2009 LGAKCRLHHPK---------SRSNGKKSRRSRKPKNTHGRYFGSM--LVEDSESQTAMSE 2057
G C+ HP+ ++++ KP T GR S+ L + +Q +
Sbjct: 158 EGKSCKFMHPRFELPMGASEQPPLPQQNQNQAKPVPTIGRSSLSLIQLTNSTPAQRQQNN 217
Query: 2058 RPTVQNNGNL 2067
TV NL
Sbjct: 218 MTTVSQQNNL 227
>gi|291229317|ref|XP_002734616.1| PREDICTED: cleavage and polyadenylation specificity factor,
putative-like [Saccoglossus kowalevskii]
Length = 276
Score = 87.8 bits (216), Expect = 6e-14, Method: Composition-based stats.
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C FF + G C K G CP+ H + VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CVFFKQ-GDCLK-GGSCPFRHVRGDRSVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECFF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
F + GLC+NK CP+ H+ C + +G+C G CR +H+ +C + G C
Sbjct: 99 FSKFGLCSNKECPFLHIDPESKIKDCAWYDRGFCKHGPHCRNRHTRRVICVNY-LCGFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HPK
Sbjct: 158 DGKNCKFQHPK 168
Score = 47.4 bits (111), Expect = 0.10, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 10/81 (12%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DP-SKIAVCTKFLKGLCSNS-DCKLTHKVIPERM 1946
K C FF++FG C+ N +CP++H DP SKI C + +G C + C+ H R
Sbjct: 92 KMPECFFFSKFGLCS--NKECPFLHIDPESKIKDCAWYDRGFCKHGPHCRNRHT----RR 145
Query: 1947 PDCSYFLQGLCTN-KNCPYRH 1966
C +L G C + KNC ++H
Sbjct: 146 VICVNYLCGFCPDGKNCKFQH 166
>gi|410931249|ref|XP_003979008.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 3 [Takifugu rubripes]
Length = 249
Score = 87.4 bits (215), Expect = 8e-14, Method: Composition-based stats.
Identities = 53/176 (30%), Positives = 80/176 (45%), Gaps = 11/176 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF R C K CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFMR-AACMK-GAMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G +CR +H+ +C + G C
Sbjct: 99 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPDCRHRHTRRVICVNY-LVGFCP 157
Query: 2009 LGAKCRLHHPKSRSNGKKSRRSRKPKNTHGRYFGSMLVEDSESQTAMSERPTVQNN 2064
G C+ HP+ S + P + + S L S PT QNN
Sbjct: 158 EGRSCKFMHPRFELPMGASEQPPLPLQSQNQ---SKLTNSSPGINNTQMMPTQQNN 210
Score = 46.2 bits (108), Expect = 0.19, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 10/81 (12%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DP-SKIAVCTKFLKGLCSNS-DCKLTHKVIPERM 1946
K C F+++FG+C+ N +CP++H DP SKI C + +G C + DC+ H R
Sbjct: 92 KMPECYFYSKFGECS--NKECPFLHIDPESKIKDCPWYDRGFCKHGPDCRHRHT----RR 145
Query: 1947 PDCSYFLQGLC-TNKNCPYRH 1966
C +L G C ++C + H
Sbjct: 146 VICVNYLVGFCPEGRSCKFMH 166
>gi|149034887|gb|EDL89607.1| rCG42591, isoform CRA_b [Rattus norvegicus]
Length = 158
Score = 87.4 bits (215), Expect = 8e-14, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 9 CEFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 66
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G CR +H+ +C + G C
Sbjct: 67 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCP 125
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 126 EGPSCKFMHPR 136
Score = 44.3 bits (103), Expect = 0.78, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F+++FG+C+ N +CP++H DP ++ D
Sbjct: 60 KMPECYFYSKFGECS--NKECPFLHIDPE--------------------------SKIKD 91
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + C +RH C +L G+C +G C+ H
Sbjct: 92 CPWYDRGFCKHGPLCRHRHTR----RVICVNYLVGFCPEGPSCKFMH 134
>gi|62857541|ref|NP_001016803.1| cleavage and polyadenylation specific factor 4-like [Xenopus
(Silurana) tropicalis]
gi|89273947|emb|CAJ82303.1| novel protein similar to cpsf4 [Xenopus (Silurana) tropicalis]
Length = 269
Score = 87.4 bits (215), Expect = 9e-14, Method: Composition-based stats.
Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 8/132 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C F+ + G C K CP+ H + K VC +L+GLC D C+ H+ RMP+C +
Sbjct: 41 CDFYVK-GICRK-GSTCPFRHLNGEKTVVCKHWLRGLCKKGDQCEFLHEYDMGRMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK+CP+ H+ C + +G+C G C+ +H+ +C + G C
Sbjct: 99 YSKFGECSNKDCPFLHIDPASKVKDCPWYDRGFCKHGPACKHRHTRRVMCANY-LVGFCP 157
Query: 2009 LGAKCRLHHPKS 2020
G KC+ HPK+
Sbjct: 158 EGPKCKYVHPKA 169
>gi|2687591|gb|AAC53567.1| clipper/cleavage and polyadenylation specificity factor 30 kDa
subunit homolog [Mus musculus]
Length = 208
Score = 87.4 bits (215), Expect = 9e-14, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 28 CEFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 85
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G CR +H+ +C + G C
Sbjct: 86 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCP 144
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 145 EGPSCKFMHPR 155
Score = 44.3 bits (103), Expect = 0.79, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F+++FG+C+ N +CP++H DP ++ D
Sbjct: 79 KMPECYFYSKFGECS--NKECPFLHIDPE--------------------------SKIKD 110
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + C +RH C +L G+C +G C+ H
Sbjct: 111 CPWYDRGFCKHGPLCRHRHTR----RVICVNYLVGFCPEGPSCKFMH 153
>gi|149054708|gb|EDM06525.1| similar to hypothetical protein D11Ertd636e (predicted), isoform
CRA_b [Rattus norvegicus]
Length = 225
Score = 87.0 bits (214), Expect = 1e-13, Method: Composition-based stats.
Identities = 52/142 (36%), Positives = 72/142 (50%), Gaps = 13/142 (9%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDP-SKIAVCTKFLKGLCSNSDC-KLTHKVIPERMPDCSY 1951
C FF + G C K CP H+ K+ VC +L+GLC SDC H+ RMP C +
Sbjct: 41 CNFFAK-GLCVK-GMLCPLRHEQGEKMVVCKHWLRGLCRKSDCCNFLHQYDVSRMPVCYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSY--VCPTFKATGSCA 2008
+ G C NK CP+ H+ P C + +G+C +G C+ +H + +CP + G C
Sbjct: 99 HSKFGNCNNKECPFLHLKPVPKLQDCPWYDQGFCKEGPLCKYRHVHQVLCPNY-FIGFCP 157
Query: 2009 LGAKCRLHHPK-----SRSNGK 2025
G KC+ HPK RSN K
Sbjct: 158 KGPKCQFGHPKMSPILHRSNMK 179
>gi|417398298|gb|JAA46182.1| Putative polyadenylation factor i complex subunit yth1 cpsf subunit
[Desmodus rotundus]
Length = 279
Score = 87.0 bits (214), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G CR +H+ +C + G C
Sbjct: 99 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGPSCKFMHPR 168
Score = 44.3 bits (103), Expect = 0.87, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F+++FG+C+ N +CP++H DP ++ D
Sbjct: 92 KMPECYFYSKFGECS--NKECPFLHIDPE--------------------------SKIKD 123
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + C +RH C +L G+C +G C+ H
Sbjct: 124 CPWYDRGFCKHGPLCRHRHTR----RVICVNYLVGFCPEGPSCKFMH 166
>gi|119597069|gb|EAW76663.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform CRA_b
[Homo sapiens]
Length = 255
Score = 87.0 bits (214), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G CR +H+ +C + G C
Sbjct: 99 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGPSCKFMHPR 168
Score = 44.3 bits (103), Expect = 0.89, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F+++FG+C+ N +CP++H DP ++ D
Sbjct: 92 KMPECYFYSKFGECS--NKECPFLHIDPE--------------------------SKIKD 123
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + C +RH C +L G+C +G C+ H
Sbjct: 124 CPWYDRGFCKHGPLCRHRHTR----RVICVNYLVGFCPEGPSCKFMH 166
>gi|281210598|gb|EFA84764.1| CCCH-type zinc finger-containing protein [Polysphondylium pallidum
PN500]
Length = 374
Score = 87.0 bits (214), Expect = 1e-13, Method: Composition-based stats.
Identities = 47/131 (35%), Positives = 71/131 (54%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDPSKIAV-CTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + G C K N CPY H ++ AV C +L+GLC + C+ H+ +MP+C +
Sbjct: 39 CRFFLK-GNCTKGN-DCPYKHSKTEHAVVCKHWLRGLCKKGELCEFLHEYDLAKMPECYF 96
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCA 2008
F + G C+N+ C Y H++ C + +G+C G +CR KH +C F G C
Sbjct: 97 FSKFGECSNQECMYLHLNPEEKVIECPWYARGFCKHGPKCRHKHVKKLLCENF-YLGFCP 155
Query: 2009 LGAKCRLHHPK 2019
G +C+ HPK
Sbjct: 156 EGPRCKYGHPK 166
Score = 43.5 bits (101), Expect = 1.5, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 42/106 (39%), Gaps = 32/106 (30%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDC 1949
K C FF++FG+ CSN +C H E++ +C
Sbjct: 90 KMPECYFFSKFGE---------------------------CSNQECMYLHLNPEEKVIEC 122
Query: 1950 SYFLQGLCTN-KNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
++ +G C + C ++HV CE F G+C +G C+ H
Sbjct: 123 PWYARGFCKHGPKCRHKHV----KKLLCENFYLGFCPEGPRCKYGH 164
>gi|148687045|gb|EDL18992.1| cleavage and polyadenylation specific factor 4, isoform CRA_a [Mus
musculus]
Length = 292
Score = 86.7 bits (213), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 65 CEFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 122
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G CR +H+ +C + G C
Sbjct: 123 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCP 181
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 182 EGPSCKFMHPR 192
Score = 43.9 bits (102), Expect = 1.0, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F+++FG+C+ N +CP++H DP ++ D
Sbjct: 116 KMPECYFYSKFGECS--NKECPFLHIDPE--------------------------SKIKD 147
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + C +RH C +L G+C +G C+ H
Sbjct: 148 CPWYDRGFCKHGPLCRHRHTR----RVICVNYLVGFCPEGPSCKFMH 190
>gi|395514830|ref|XP_003761615.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 4
isoform 2 [Sarcophilus harrisii]
Length = 244
Score = 86.7 bits (213), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G CR +H+ +C + G C
Sbjct: 99 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGPSCKFMHPR 168
Score = 43.9 bits (102), Expect = 1.1, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F+++FG+C+ N +CP++H DP ++ D
Sbjct: 92 KMPECYFYSKFGECS--NKECPFLHIDPE--------------------------SKIKD 123
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + C +RH C +L G+C +G C+ H
Sbjct: 124 CPWYDRGFCKHGPLCRHRHTR----RVICVNYLVGFCPEGPSCKFMH 166
>gi|344289702|ref|XP_003416580.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Loxodonta africana]
Length = 244
Score = 86.7 bits (213), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G CR +H+ +C + G C
Sbjct: 99 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGPSCKFMHPR 168
Score = 43.9 bits (102), Expect = 1.1, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F+++FG+C+ N +CP++H DP ++ D
Sbjct: 92 KMPECYFYSKFGECS--NKECPFLHIDPE--------------------------SKIKD 123
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + C +RH C +L G+C +G C+ H
Sbjct: 124 CPWYDRGFCKHGPLCRHRHTR----RVICVNYLVGFCPEGPSCKFMH 166
>gi|193788659|ref|NP_001123357.1| putative cleavage and polyadenylation specificity factor subunit
4-like protein [Homo sapiens]
gi|332848949|ref|XP_001149545.2| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein [Pan troglodytes]
gi|206729925|sp|A6NMK7.3|CPS4L_HUMAN RecName: Full=Putative cleavage and polyadenylation specificity
factor subunit 4-like protein
gi|187957320|gb|AAI57871.1| CPSF4L protein [Homo sapiens]
Length = 179
Score = 86.7 bits (213), Expect = 1e-13, Method: Composition-based stats.
Identities = 48/128 (37%), Positives = 69/128 (53%), Gaps = 10/128 (7%)
Query: 1894 CQFFTRFGKCNKDNGK-CPYIHDP-SKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCS 1950
C FFT+ G C K GK CP+ HD K+ VC +L+GLC D CK H+ RMP+C
Sbjct: 41 CNFFTK-GLCEK--GKLCPFRHDRGEKMVVCKHWLRGLCKKGDHCKFLHQYDLTRMPECY 97
Query: 1951 YFLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSC 2007
++ + G C+NK C + HV + C + +G+C DG C+ +H +C + G C
Sbjct: 98 FYSKFGDCSNKECSFLHVKPAFKSQDCPWYDQGFCKDGPLCKYRHVPRIMCLNY-LVGFC 156
Query: 2008 ALGAKCRL 2015
G KC+
Sbjct: 157 PEGPKCQF 164
>gi|18859059|ref|NP_571084.1| cleavage and polyadenylation specificity factor subunit 4 [Danio
rerio]
gi|1575709|gb|AAC60040.1| no arches [Danio rerio]
gi|28277462|gb|AAH45289.1| No arches [Danio rerio]
gi|182888966|gb|AAI64456.1| Nar protein [Danio rerio]
Length = 271
Score = 86.7 bits (213), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C++F R C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEYFMR-AACMK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G +CR +H+ +C + G C
Sbjct: 99 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPDCRHRHTRRVICVNY-LVGFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGKSCKFMHPR 168
Score = 47.8 bits (112), Expect = 0.068, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 10/81 (12%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DP-SKIAVCTKFLKGLCSNS-DCKLTHKVIPERM 1946
K C F+++FG+C+ N +CP++H DP SKI C + +G C + DC+ H R
Sbjct: 92 KMPECYFYSKFGECS--NKECPFLHIDPESKIKDCPWYDRGFCKHGPDCRHRHT----RR 145
Query: 1947 PDCSYFLQGLC-TNKNCPYRH 1966
C +L G C K+C + H
Sbjct: 146 VICVNYLVGFCPEGKSCKFMH 166
>gi|59891425|ref|NP_001012351.1| cleavage and polyadenylation specificity factor subunit 4 [Rattus
norvegicus]
gi|81882852|sp|Q5FVR7.1|CPSF4_RAT RecName: Full=Cleavage and polyadenylation specificity factor subunit
4; AltName: Full=Cleavage and polyadenylation specificity
factor 30 kDa subunit; Short=CPSF 30 kDa subunit
gi|58476448|gb|AAH89824.1| Cleavage and polyadenylation specific factor 4 [Rattus norvegicus]
gi|183229546|gb|ACC60271.1| cleavage and polyadenylation specific factor 4 isoform 1 [Mus
musculus]
Length = 243
Score = 86.3 bits (212), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G CR +H+ +C + G C
Sbjct: 99 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGPSCKFMHPR 168
Score = 43.5 bits (101), Expect = 1.2, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F+++FG+C+ N +CP++H DP ++ D
Sbjct: 92 KMPECYFYSKFGECS--NKECPFLHIDPE--------------------------SKIKD 123
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + C +RH C +L G+C +G C+ H
Sbjct: 124 CPWYDRGFCKHGPLCRHRHTR----RVICVNYLVGFCPEGPSCKFMH 166
>gi|149034886|gb|EDL89606.1| rCG42591, isoform CRA_a [Rattus norvegicus]
Length = 199
Score = 86.3 bits (212), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 9 CEFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 66
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G CR +H+ +C + G C
Sbjct: 67 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCP 125
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 126 EGPSCKFMHPR 136
Score = 43.5 bits (101), Expect = 1.2, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F+++FG+C+ N +CP++H DP ++ D
Sbjct: 60 KMPECYFYSKFGECS--NKECPFLHIDPE--------------------------SKIKD 91
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + C +RH C +L G+C +G C+ H
Sbjct: 92 CPWYDRGFCKHGPLCRHRHTR----RVICVNYLVGFCPEGPSCKFMH 134
>gi|66826447|ref|XP_646578.1| CCCH-type zinc finger-containing protein [Dictyostelium discoideum
AX4]
gi|60474487|gb|EAL72424.1| CCCH-type zinc finger-containing protein [Dictyostelium discoideum
AX4]
Length = 372
Score = 86.3 bits (212), Expect = 2e-13, Method: Composition-based stats.
Identities = 47/131 (35%), Positives = 71/131 (54%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDPSKIAV-CTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + G C K + CPY H ++ AV C +L+GLC + C+ H+ ++MP+C +
Sbjct: 38 CRFFLK-GSCTKGS-DCPYKHTKAERAVVCKHWLRGLCKKGELCEFLHEYDLQKMPECYF 95
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCA 2008
F + G C N+ C Y HV+ C + +G+C G +CR KH +C + G C
Sbjct: 96 FSKHGECNNQECMYLHVNPEEKVRECPWYSRGFCKHGPKCRHKHIKKLLCENY-YLGFCP 154
Query: 2009 LGAKCRLHHPK 2019
G KC+ HPK
Sbjct: 155 EGPKCKYGHPK 165
Score = 40.8 bits (94), Expect = 9.3, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 47/108 (43%), Gaps = 34/108 (31%)
Query: 1889 RKRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMP 1947
+K C FF++ G+CN N +C Y+H +P E++
Sbjct: 88 QKMPECYFFSKHGECN--NQECMYLHVNPE--------------------------EKVR 119
Query: 1948 DCSYFLQGLCTN-KNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
+C ++ +G C + C ++H+ CE + G+C +G +C+ H
Sbjct: 120 ECPWYSRGFCKHGPKCRHKHI----KKLLCENYYLGFCPEGPKCKYGH 163
>gi|260949117|ref|XP_002618855.1| hypothetical protein CLUG_00014 [Clavispora lusitaniae ATCC 42720]
gi|238846427|gb|EEQ35891.1| hypothetical protein CLUG_00014 [Clavispora lusitaniae ATCC 42720]
Length = 361
Score = 86.3 bits (212), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 86/199 (43%), Gaps = 26/199 (13%)
Query: 1843 RLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRW-------SLH--TARLRLARKRKY 1893
R+ + N Y + G +LI P S V W S+H R + + Y
Sbjct: 144 RVQVNNVTYAVVNGGKRLI--PLSNPDADQSPSVEWGSWTYRKSVHGTLKRTDMTKVPIY 201
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFL 1953
C+ F+R G C ++ C +IHD +C FL C + +C L+H +P CSYFL
Sbjct: 202 CRSFSRTGVC-EEGESCKHIHDRRMQRLCWDFLNDQC-HGECSLSHMSSEYNVPLCSYFL 259
Query: 1954 QGLCTNKNCPYRHVHVNP---------NASTCEGFLKG-YCADGDECRKKHSYVCPTFKA 2003
G C N C + H NP + C F KG +C G +C H Y CP ++
Sbjct: 260 AGNCKNPACSFSH---NPPPHSMDDKYSIWLCRPFSKGGWCIRGKKCPFLHLYQCPDYEE 316
Query: 2004 TGSCALGAKCRLHHPKSRS 2022
G C LG C L H S S
Sbjct: 317 YGQCPLGNNCNLQHVDSES 335
>gi|332867112|ref|XP_001137776.2| PREDICTED: cleavage and polyadenylation specificity factor subunit 4
isoform 6 [Pan troglodytes]
gi|397489492|ref|XP_003815760.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 4
isoform 1 [Pan paniscus]
gi|410214166|gb|JAA04302.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
gi|410249440|gb|JAA12687.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
gi|410289412|gb|JAA23306.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
gi|410353007|gb|JAA43107.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
Length = 244
Score = 86.3 bits (212), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G CR +H+ +C + G C
Sbjct: 99 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGPSCKFMHPR 168
Score = 43.5 bits (101), Expect = 1.2, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F+++FG+C+ N +CP++H DP ++ D
Sbjct: 92 KMPECYFYSKFGECS--NKECPFLHIDPE--------------------------SKIKD 123
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + C +RH C +L G+C +G C+ H
Sbjct: 124 CPWYDRGFCKHGPLCRHRHTR----RVICVNYLVGFCPEGPSCKFMH 166
>gi|318187062|ref|NP_001187768.1| cleavage and polyadenylation specificity factor subunit 4 [Ictalurus
punctatus]
gi|308323923|gb|ADO29097.1| cleavage and polyadenylation specificity factor subunit 4 [Ictalurus
punctatus]
Length = 271
Score = 86.3 bits (212), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/131 (33%), Positives = 68/131 (51%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF R C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFMR-SACLK-GGMCPFRHISREKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G +CR +H+ +C + G C
Sbjct: 99 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPDCRHRHTRRVICVNY-LVGFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGKSCKFMHPR 168
Score = 47.4 bits (111), Expect = 0.098, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 10/81 (12%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DP-SKIAVCTKFLKGLCSNS-DCKLTHKVIPERM 1946
K C F+++FG+C+ N +CP++H DP SKI C + +G C + DC+ H R
Sbjct: 92 KMPECYFYSKFGECS--NKECPFLHIDPESKIKDCPWYDRGFCKHGPDCRHRHT----RR 145
Query: 1947 PDCSYFLQGLC-TNKNCPYRH 1966
C +L G C K+C + H
Sbjct: 146 VICVNYLVGFCPEGKSCKFMH 166
>gi|149755352|ref|XP_001494983.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Equus caballus]
gi|301777648|ref|XP_002924238.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Ailuropoda melanoleuca]
gi|348568556|ref|XP_003470064.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Cavia porcellus]
gi|354495217|ref|XP_003509727.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Cricetulus griseus]
gi|410984389|ref|XP_003998511.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 4
isoform 2 [Felis catus]
gi|183229548|gb|ACC60272.1| cleavage and polyadenylation specific factor 4 isoform 2 [Mus
musculus]
Length = 244
Score = 86.3 bits (212), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G CR +H+ +C + G C
Sbjct: 99 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGPSCKFMHPR 168
Score = 43.5 bits (101), Expect = 1.3, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F+++FG+C+ N +CP++H DP ++ D
Sbjct: 92 KMPECYFYSKFGECS--NKECPFLHIDPE--------------------------SKIKD 123
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + C +RH C +L G+C +G C+ H
Sbjct: 124 CPWYDRGFCKHGPLCRHRHTR----RVICVNYLVGFCPEGPSCKFMH 166
>gi|29792109|gb|AAH50738.1| CPSF4 protein [Homo sapiens]
gi|119597071|gb|EAW76665.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform CRA_d
[Homo sapiens]
gi|312153176|gb|ADQ33100.1| cleavage and polyadenylation specific factor 4, 30kDa [synthetic
construct]
Length = 243
Score = 86.3 bits (212), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G CR +H+ +C + G C
Sbjct: 99 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGPSCKFMHPR 168
Score = 43.5 bits (101), Expect = 1.3, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F+++FG+C+ N +CP++H DP ++ D
Sbjct: 92 KMPECYFYSKFGECS--NKECPFLHIDPE--------------------------SKIKD 123
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + C +RH C +L G+C +G C+ H
Sbjct: 124 CPWYDRGFCKHGPLCRHRHTR----RVICVNYLVGFCPEGPSCKFMH 166
>gi|395852820|ref|XP_003798928.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 4
isoform 1 [Otolemur garnettii]
Length = 244
Score = 86.3 bits (212), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G CR +H+ +C + G C
Sbjct: 99 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGPSCKFMHPR 168
Score = 43.5 bits (101), Expect = 1.3, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F+++FG+C+ N +CP++H DP ++ D
Sbjct: 92 KMPECYFYSKFGECS--NKECPFLHIDPE--------------------------SKIKD 123
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + C +RH C +L G+C +G C+ H
Sbjct: 124 CPWYDRGFCKHGPLCRHRHTR----RVICVNYLVGFCPEGPSCKFMH 166
>gi|73957938|ref|XP_860761.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 4
isoform 3 [Canis lupus familiaris]
Length = 244
Score = 86.3 bits (212), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G CR +H+ +C + G C
Sbjct: 99 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGPSCKFMHPR 168
Score = 43.5 bits (101), Expect = 1.3, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F+++FG+C+ N +CP++H DP ++ D
Sbjct: 92 KMPECYFYSKFGECS--NKECPFLHIDPE--------------------------SKIKD 123
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + C +RH C +L G+C +G C+ H
Sbjct: 124 CPWYDRGFCKHGPLCRHRHTR----RVICVNYLVGFCPEGPSCKFMH 166
>gi|27806837|ref|NP_776367.1| cleavage and polyadenylation specificity factor subunit 4 [Bos
taurus]
gi|75057446|sp|O19137.1|CPSF4_BOVIN RecName: Full=Cleavage and polyadenylation specificity factor subunit
4; AltName: Full=Cleavage and polyadenylation specificity
factor 30 kDa subunit; Short=CPSF 30 kDa subunit
gi|2327052|gb|AAC48759.1| cleavage and polyadenylation specificity factor 30 kDa subunit [Bos
taurus]
gi|296472897|tpg|DAA15012.1| TPA: cleavage and polyadenylation specificity factor subunit 4 [Bos
taurus]
Length = 243
Score = 86.3 bits (212), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G CR +H+ +C + G C
Sbjct: 99 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGPSCKFMHPR 168
Score = 43.5 bits (101), Expect = 1.3, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F+++FG+C+ N +CP++H DP ++ D
Sbjct: 92 KMPECYFYSKFGECS--NKECPFLHIDPE--------------------------SKIKD 123
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + C +RH C +L G+C +G C+ H
Sbjct: 124 CPWYDRGFCKHGPLCRHRHTR----RVICVNYLVGFCPEGPSCKFMH 166
>gi|125987603|ref|NP_001075028.1| cleavage and polyadenylation specificity factor subunit 4 isoform 2
[Homo sapiens]
gi|383872422|ref|NP_001244547.1| cleavage and polyadenylation specificity factor subunit 4 [Macaca
mulatta]
gi|332258048|ref|XP_003278115.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 4
[Nomascus leucogenys]
gi|402862922|ref|XP_003895787.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 4
isoform 1 [Papio anubis]
gi|403285963|ref|XP_003934278.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 4
isoform 1 [Saimiri boliviensis boliviensis]
gi|426357074|ref|XP_004045873.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 4
isoform 1 [Gorilla gorilla gorilla]
gi|13111867|gb|AAH03101.1| Cleavage and polyadenylation specific factor 4, 30kDa [Homo sapiens]
gi|119597070|gb|EAW76664.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform CRA_c
[Homo sapiens]
gi|380809014|gb|AFE76382.1| cleavage and polyadenylation specificity factor subunit 4 isoform 2
[Macaca mulatta]
gi|383413435|gb|AFH29931.1| cleavage and polyadenylation specificity factor subunit 4 isoform 2
[Macaca mulatta]
gi|384940112|gb|AFI33661.1| cleavage and polyadenylation specificity factor subunit 4 isoform 2
[Macaca mulatta]
Length = 244
Score = 86.3 bits (212), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G CR +H+ +C + G C
Sbjct: 99 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGPSCKFMHPR 168
Score = 43.5 bits (101), Expect = 1.3, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F+++FG+C+ N +CP++H DP ++ D
Sbjct: 92 KMPECYFYSKFGECS--NKECPFLHIDPE--------------------------SKIKD 123
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + C +RH C +L G+C +G C+ H
Sbjct: 124 CPWYDRGFCKHGPLCRHRHTR----RVICVNYLVGFCPEGPSCKFMH 166
>gi|417397723|gb|JAA45895.1| Putative polyadenylation factor i complex subunit yth1 cpsf subunit
[Desmodus rotundus]
Length = 243
Score = 86.3 bits (212), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G CR +H+ +C + G C
Sbjct: 99 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGPSCKFMHPR 168
Score = 43.5 bits (101), Expect = 1.3, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F+++FG+C+ N +CP++H DP ++ D
Sbjct: 92 KMPECYFYSKFGECS--NKECPFLHIDPE--------------------------SKIKD 123
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + C +RH C +L G+C +G C+ H
Sbjct: 124 CPWYDRGFCKHGPLCRHRHTR----RVICVNYLVGFCPEGPSCKFMH 166
>gi|320165321|gb|EFW42220.1| zinc finger protein [Capsaspora owczarzaki ATCC 30864]
Length = 184
Score = 85.9 bits (211), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 8/130 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDPS-KIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+ F R G+C K N C + H + K VC +L+GLC + C+ H+ +MP+C +
Sbjct: 42 CKLFLR-GQCKKGN-SCAFRHTRTDKKVVCKHWLRGLCKKGEHCEFLHEYDMSKMPECYF 99
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCA 2008
F + G CTN C YRH+ C + +G+C G +C+ +H +C + TG C
Sbjct: 100 FQKYGQCTNTECQYRHIDPETKKKDCPWYARGFCRHGAQCKLRHRKRVICTNY-LTGFCP 158
Query: 2009 LGAKCRLHHP 2018
G C+ HP
Sbjct: 159 DGPTCQFAHP 168
Score = 42.4 bits (98), Expect = 2.8, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 10/81 (12%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DP-SKIAVCTKFLKGLCSN-SDCKLTHKVIPERM 1946
K C FF ++G+C N +C Y H DP +K C + +G C + + CKL H+ +
Sbjct: 93 KMPECYFFQKYGQCT--NTECQYRHIDPETKKKDCPWYARGFCRHGAQCKLRHR----KR 146
Query: 1947 PDCSYFLQGLCTN-KNCPYRH 1966
C+ +L G C + C + H
Sbjct: 147 VICTNYLTGFCPDGPTCQFAH 167
>gi|291411293|ref|XP_002721910.1| PREDICTED: cleavage and polyadenylation specific factor 4, 30kDa
isoform 1 [Oryctolagus cuniculus]
Length = 244
Score = 85.9 bits (211), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G CR +H+ +C + G C
Sbjct: 99 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGPSCKFMHPR 168
Score = 43.5 bits (101), Expect = 1.4, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F+++FG+C+ N +CP++H DP ++ D
Sbjct: 92 KMPECYFYSKFGECS--NKECPFLHIDPE--------------------------SKIKD 123
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + C +RH C +L G+C +G C+ H
Sbjct: 124 CPWYDRGFCKHGPLCRHRHTR----RVICVNYLVGFCPEGPSCKFMH 166
>gi|343423882|emb|CCD18022.1| hypothetical protein, conserved in T. vivax [Trypanosoma vivax Y486]
Length = 276
Score = 85.9 bits (211), Expect = 3e-13, Method: Composition-based stats.
Identities = 51/156 (32%), Positives = 81/156 (51%), Gaps = 12/156 (7%)
Query: 1887 LARKRKYCQFFTRFGKCNKDNGKCPYIHDPS-----KIAVCTKFLKGLCSNSD-CKLTHK 1940
+ ++R+ CQ F + GKC ++ CP H S ++ VC +L+G C N + C H+
Sbjct: 24 VVKRREICQAF-QSGKC-RNGSACPERHVLSQFKTMRLEVCKHWLRGACVNGENCIYLHE 81
Query: 1941 VIPERMPDCSYFLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCP 1999
+P C+++ + G C+N CP++HV N + C + +G+C G CR +H + P
Sbjct: 82 YDDRYVPACAFYQRLGECSNPECPFQHVIQVENQAECAAYRRGFCPQGPRCRLRHVFHEP 141
Query: 2000 -TFKATGSCALGAKCRLHHPKSR--SNGKKSRRSRK 2032
F TG C LG KC HP + S S+R R+
Sbjct: 142 CVFYLTGFCPLGPKCSKGHPVQQLYSRNAVSQRLRQ 177
>gi|453088842|gb|EMF16882.1| hypothetical protein SEPMUDRAFT_146006 [Mycosphaerella populorum
SO2202]
Length = 481
Score = 85.9 bits (211), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 77/161 (47%), Gaps = 14/161 (8%)
Query: 1908 GKCPY------IHDPSKIAVCTKFLK-GLC-SNSDCKLTHKVIPERMPDCSYFLQGLCTN 1959
G CP+ HDPS+IA+C +F G C + C L+H+ R+P C +FL+G CT
Sbjct: 295 GNCPHGPTCNDRHDPSRIAICKEFFATGFCQAGKSCDLSHEPSYHRVPACIHFLRGNCTK 354
Query: 1960 KNCPYRHVHVNPNASTCEGFLK-GYCADGDECRKKHSYVCPTFKATGSCALGAK--CRLH 2016
C Y HV+V + C F GYC+ G +C +H + CP + G CA K C L
Sbjct: 355 SACRYAHVNVPASVLVCRPFATLGYCSKGVKCGNRHVFECPDYTNLGHCAAREKRACTLP 414
Query: 2017 HPKSRSNGKKSRRSRKPKNTHGRYFGSMLVEDSESQTAMSE 2057
H + R++ K + GS + D E Q +E
Sbjct: 415 H---IDHANTLRKAAKRQGKQSSEDGSDVSSDEEEQAIAAE 452
>gi|50755569|ref|XP_414800.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 4
[Gallus gallus]
Length = 243
Score = 85.9 bits (211), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G CR +H+ +C + G C
Sbjct: 99 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGPTCKFMHPR 168
Score = 43.1 bits (100), Expect = 1.8, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F+++FG+C+ N +CP++H DP ++ D
Sbjct: 92 KMPECYFYSKFGECS--NKECPFLHIDPE--------------------------SKIKD 123
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + C +RH C +L G+C +G C+ H
Sbjct: 124 CPWYDRGFCKHGPLCRHRHTR----RVICVNYLVGFCPEGPTCKFMH 166
>gi|148231564|ref|NP_001086337.1| cleavage and polyadenylation specificity factor subunit 4 [Xenopus
laevis]
gi|82183649|sp|Q6DJP7.1|CPSF4_XENLA RecName: Full=Cleavage and polyadenylation specificity factor subunit
4
gi|49522087|gb|AAH75128.1| MGC81862 protein [Xenopus laevis]
Length = 269
Score = 85.5 bits (210), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFLK-SACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G CR +H+ +C + G C
Sbjct: 99 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCI 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGPNCKFMHPR 168
Score = 45.4 bits (106), Expect = 0.36, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 10/81 (12%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DP-SKIAVCTKFLKGLCSNSD-CKLTHKVIPERM 1946
K C F+++FG+C+ N +CP++H DP SKI C + +G C + C+ H R
Sbjct: 92 KMPECYFYSKFGECS--NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHT----RR 145
Query: 1947 PDCSYFLQGLCTN-KNCPYRH 1966
C +L G C NC + H
Sbjct: 146 VICVNYLVGFCIEGPNCKFMH 166
>gi|397478491|ref|XP_003810578.1| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein [Pan paniscus]
Length = 147
Score = 85.5 bits (210), Expect = 3e-13, Method: Composition-based stats.
Identities = 48/128 (37%), Positives = 69/128 (53%), Gaps = 10/128 (7%)
Query: 1894 CQFFTRFGKCNKDNGK-CPYIHDP-SKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCS 1950
C FFT+ G C K GK CP+ HD K+ VC +L+GLC D CK H+ RMP+C
Sbjct: 9 CNFFTK-GLCEK--GKLCPFRHDRGEKMVVCKHWLRGLCKKGDHCKFLHQYDLTRMPECY 65
Query: 1951 YFLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSC 2007
++ + G C+NK C + HV + C + +G+C DG C+ +H +C + G C
Sbjct: 66 FYSKFGDCSNKECSFLHVKPAFKSQDCPWYDQGFCKDGPLCKYRHVPRIMCLNY-LVGFC 124
Query: 2008 ALGAKCRL 2015
G KC+
Sbjct: 125 PEGPKCQF 132
>gi|449476092|ref|XP_002192710.2| PREDICTED: cleavage and polyadenylation specificity factor subunit 4
[Taeniopygia guttata]
Length = 243
Score = 85.5 bits (210), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G CR +H+ +C + G C
Sbjct: 99 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGPACKFMHPR 168
Score = 43.1 bits (100), Expect = 1.9, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F+++FG+C+ N +CP++H DP ++ D
Sbjct: 92 KMPECYFYSKFGECS--NKECPFLHIDPE--------------------------SKIKD 123
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + C +RH C +L G+C +G C+ H
Sbjct: 124 CPWYDRGFCKHGPLCRHRHTR----RVICVNYLVGFCPEGPACKFMH 166
>gi|403285965|ref|XP_003934279.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 4
isoform 2 [Saimiri boliviensis boliviensis]
Length = 216
Score = 85.5 bits (210), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 13 CEFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 70
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G CR +H+ +C + G C
Sbjct: 71 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCP 129
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 130 EGPSCKFMHPR 140
Score = 43.1 bits (100), Expect = 1.8, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F+++FG+C+ N +CP++H DP ++ D
Sbjct: 64 KMPECYFYSKFGECS--NKECPFLHIDPE--------------------------SKIKD 95
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + C +RH C +L G+C +G C+ H
Sbjct: 96 CPWYDRGFCKHGPLCRHRHTR----RVICVNYLVGFCPEGPSCKFMH 138
>gi|410931251|ref|XP_003979009.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 4 [Takifugu rubripes]
Length = 237
Score = 85.5 bits (210), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF R C K CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFMR-AACMK-GAMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G +CR +H+ +C + G C
Sbjct: 99 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPDCRHRHTRRVICVNY-LVGFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGRSCKFMHPR 168
Score = 47.0 bits (110), Expect = 0.13, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 10/81 (12%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DP-SKIAVCTKFLKGLCSNS-DCKLTHKVIPERM 1946
K C F+++FG+C+ N +CP++H DP SKI C + +G C + DC+ H R
Sbjct: 92 KMPECYFYSKFGECS--NKECPFLHIDPESKIKDCPWYDRGFCKHGPDCRHRHT----RR 145
Query: 1947 PDCSYFLQGLC-TNKNCPYRH 1966
C +L G C ++C + H
Sbjct: 146 VICVNYLVGFCPEGRSCKFMH 166
>gi|294654915|ref|XP_456999.2| DEHA2B00726p [Debaryomyces hansenii CBS767]
gi|199429553|emb|CAG84984.2| DEHA2B00726p [Debaryomyces hansenii CBS767]
Length = 288
Score = 85.5 bits (210), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 68/151 (45%), Gaps = 20/151 (13%)
Query: 1894 CQFFTR------------FGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKV 1941
C++FTR G C K C Y HD + I +C ++L C N +C L+H
Sbjct: 23 CRYFTRTVTTFFQTFQLVIGLCQK-GSSCKYKHDQNHIKLCRQYLSNNCQNKNCLLSHSP 81
Query: 1942 IPERMPDCSYFLQGLCTNKNCPYRHV----HVNPNAS--TCEGF-LKGYCADGDECRKKH 1994
P C YFL+ C N C Y HV + PN C F + G C+ G +C H
Sbjct: 82 SQYNTPLCRYFLENKCVNPQCTYEHVLPKNYDKPNYEIWVCRPFSIGGSCSRGRKCPFMH 141
Query: 1995 SYVCPTFKATGSCALGAKCRLHHPKSRSNGK 2025
+VCP F+ G+C G C L H + S +
Sbjct: 142 LFVCPDFQENGACPRGKSCTLAHSATLSTQR 172
>gi|410931247|ref|XP_003979007.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Takifugu rubripes]
Length = 248
Score = 85.1 bits (209), Expect = 4e-13, Method: Composition-based stats.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 24/162 (14%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF R C K CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFMR-AACMK-GAMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G +CR +H+ +C + G C
Sbjct: 99 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPDCRHRHTRRVICVNY-LVGFCP 157
Query: 2009 LGAKCRLHHPK----------------SRSNGKKSRRSRKPK 2034
G C+ HP+ S++ K RR + PK
Sbjct: 158 EGRSCKFMHPRFELPMGASEQPPLPLQSQNQSKVRRRIQGPK 199
Score = 49.3 bits (116), Expect = 0.028, Method: Composition-based stats.
Identities = 42/153 (27%), Positives = 61/153 (39%), Gaps = 42/153 (27%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DP-SKIAVCTKFLKGLCSNSDCKLTHKVIPERMP 1947
K C F+++FG+C+ N +CP++H DP SKI C + +G C + P
Sbjct: 92 KMPECYFYSKFGECS--NKECPFLHIDPESKIKDCPWYDRGFCKHG-------------P 136
Query: 1948 DCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSC 2007
DC RH H C +L G+C +G C+ H P F+
Sbjct: 137 DC---------------RHRHT--RRVICVNYLVGFCPEGRSCKFMH----PRFE----L 171
Query: 2008 ALGAKCRLHHPKSRSNGKKSRRSRKPKNTHGRY 2040
+GA + P N K RR + RY
Sbjct: 172 PMGASEQPPLPLQSQNQSKVRRRIQGPKLQPRY 204
>gi|114052376|ref|NP_001040511.1| cleavage and polyadenylation specific factor 4 [Bombyx mori]
gi|95102612|gb|ABF51244.1| cleavage and polyadenylation specific factor 4 [Bombyx mori]
Length = 288
Score = 84.7 bits (208), Expect = 5e-13, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 68/131 (51%), Gaps = 7/131 (5%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+F+++ G C + +CPY H + VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFYSQPGGCG-NGAQCPYRHVRGDRTVVCKHWLRGLCKKGDQCEFLHEYDMSKMPECYF 99
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCA 2008
+ + C NK CP+ H+ C + +G+C G CR +H +C + A G C
Sbjct: 100 YARFNACHNKECPFLHIDPESKIKDCPWYDRGFCRHGPHCRHRHVRRVLCINYLA-GFCP 158
Query: 2009 LGAKCRLHHPK 2019
GA C+ HP+
Sbjct: 159 DGASCKFMHPR 169
>gi|241958348|ref|XP_002421893.1| CCCH zinc finger protein; transcription factor with zinc finger
DNA-binding motif, putative [Candida dubliniensis CD36]
gi|223645238|emb|CAX39849.1| CCCH zinc finger protein [Candida dubliniensis CD36]
Length = 235
Score = 84.7 bits (208), Expect = 5e-13, Method: Composition-based stats.
Identities = 45/115 (39%), Positives = 57/115 (49%), Gaps = 7/115 (6%)
Query: 1910 CPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHV-- 1967
C Y HD KI +C FL G C + +C L+H P C YFL C N NC YRH
Sbjct: 8 CKYDHDKEKIRICPLFLLGKCYSKNCLLSHSPNDNNTPQCRYFLGKSCQNPNCKYRHFKP 67
Query: 1968 --HVNPNAS--TCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
+ +PN TC F + G+C+ G +C H CP F+ C LG +C L H
Sbjct: 68 ANYNDPNYEIWTCRPFAIGGFCSRGKKCPFLHLLNCPDFEEDNYCYLGRECPLTH 122
>gi|56118476|ref|NP_001007933.1| cleavage and polyadenylation specificity factor subunit 4 [Xenopus
(Silurana) tropicalis]
gi|82181478|sp|Q66KE3.1|CPSF4_XENTR RecName: Full=Cleavage and polyadenylation specificity factor subunit
4
gi|51513396|gb|AAH80440.1| cpsf4 protein [Xenopus (Silurana) tropicalis]
Length = 269
Score = 84.7 bits (208), Expect = 5e-13, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFLK-SACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G CR +H+ +C + G C
Sbjct: 99 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCI 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGPNCKFMHPR 168
Score = 45.1 bits (105), Expect = 0.52, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 10/81 (12%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DP-SKIAVCTKFLKGLCSNSD-CKLTHKVIPERM 1946
K C F+++FG+C+ N +CP++H DP SKI C + +G C + C+ H R
Sbjct: 92 KMPECYFYSKFGECS--NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHT----RR 145
Query: 1947 PDCSYFLQGLCTN-KNCPYRH 1966
C +L G C NC + H
Sbjct: 146 VICVNYLVGFCIEGPNCKFMH 166
>gi|156381166|ref|XP_001632137.1| predicted protein [Nematostella vectensis]
gi|156219188|gb|EDO40074.1| predicted protein [Nematostella vectensis]
Length = 173
Score = 84.7 bits (208), Expect = 6e-13, Method: Composition-based stats.
Identities = 44/136 (32%), Positives = 66/136 (48%), Gaps = 18/136 (13%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDP-SKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C FF + G CN+ CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CDFFVK-GLCNR-GAYCPFRHTSGEKTVVCKHWLRGLCKKGDQCEFLHQYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH-------SYVCPTFKA 2003
+ + G C+NK C Y H+ C + +G+C G CR +H +Y+C
Sbjct: 99 YSKFGECSNKKCQYLHIDPQSKIKDCPWYDRGFCKHGPHCRHRHVRRVLCINYLC----- 153
Query: 2004 TGSCALGAKCRLHHPK 2019
G C G C+ HP+
Sbjct: 154 -GFCPDGPNCKHKHPR 168
Score = 50.8 bits (120), Expect = 0.008, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F+++FG+C+ N KC Y+H DP ++ D
Sbjct: 92 KMPECYFYSKFGECS--NKKCQYLHIDPQ--------------------------SKIKD 123
Query: 1949 CSYFLQGLCTN-KNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + +C +RHV C +L G+C DG C+ KH
Sbjct: 124 CPWYDRGFCKHGPHCRHRHVR----RVLCINYLCGFCPDGPNCKHKH 166
>gi|354544945|emb|CCE41670.1| hypothetical protein CPAR2_802200 [Candida parapsilosis]
Length = 461
Score = 84.7 bits (208), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 85/196 (43%), Gaps = 28/196 (14%)
Query: 1843 RLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRW--------------SLHTARLRLA 1888
R++I ++Y + NG I P + A + + W S H +R+
Sbjct: 157 RVLINGEKYSVVANG--YILSPLIYYKN-AGDTITWNGQLYEVTNSGYYTSQHGSRVN-- 211
Query: 1889 RKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
R C +FT G C K CPY+H+ KI +C +L G C++S+C L+H P
Sbjct: 212 -DRVNCHYFTSLGFCEK-GSNCPYVHNKKKIRICPYYLNGYCADSNCLLSHTPNCHNTPL 269
Query: 1949 CSYFLQGLCTNKNCPYRHV---HVNP---NASTCEGFLKG-YCADGDECRKKHSYVCPTF 2001
C + L+ CT C Y H+ H S C F G +C G C H + CP +
Sbjct: 270 CYFNLENRCTKSQCRYSHLVPEHYGDKKYEISICRPFSVGHWCPRGRNCPFLHVWNCPDY 329
Query: 2002 KATGSCALGAKCRLHH 2017
+ +C G C L+H
Sbjct: 330 EEELACPRGDYCSLNH 345
>gi|345310735|ref|XP_001521535.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Ornithorhynchus anatinus]
Length = 241
Score = 84.3 bits (207), Expect = 6e-13, Method: Composition-based stats.
Identities = 47/142 (33%), Positives = 69/142 (48%), Gaps = 12/142 (8%)
Query: 1903 CNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTN 1959
C G CP+ H K VC +L+GLC D C+ H+ +MP+C +F G C+N
Sbjct: 42 CFCPGGLCPFRHLSGEKTVVCKHWLRGLCKKGDQCEFLHQYDVTKMPECYFFSNFGKCSN 101
Query: 1960 KNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCALGAKCRLHH 2017
K CP+ HV C + +G+C +G C+ +H+ +C + G C G KC+ H
Sbjct: 102 KECPFLHVDPASRLRDCPWYNQGFCKNGPLCKYQHTRRVMCINY-LVGFCPAGPKCKFMH 160
Query: 2018 PK------SRSNGKKSRRSRKP 2033
PK ++ N K S R P
Sbjct: 161 PKMNLLLGNQDNFKDSSVDRLP 182
Score = 51.2 bits (121), Expect = 0.007, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C FF+ FGKC+ N +CP++H DP+ R+ D
Sbjct: 86 KMPECYFFSNFGKCS--NKECPFLHVDPA--------------------------SRLRD 117
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ QG C N C Y+H C +L G+C G +C+ H
Sbjct: 118 CPWYNQGFCKNGPLCKYQHTR----RVMCINYLVGFCPAGPKCKFMH 160
>gi|378755778|gb|EHY65804.1| zinc finger protein [Nematocida sp. 1 ERTm2]
Length = 159
Score = 84.3 bits (207), Expect = 6e-13, Method: Composition-based stats.
Identities = 40/116 (34%), Positives = 65/116 (56%), Gaps = 5/116 (4%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRHVHVNPNASTCEG 1978
VC +L+GLC D C+ H ++MP+C +F + G C+N++C + H+ N + C
Sbjct: 31 VCKHWLRGLCKKGDVCEFLHVYALDKMPECWFFSKYGECSNQDCLFLHIDPNSKSKECIW 90
Query: 1979 FLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSRK 2032
+ +G+C G+ CR KH +C ++A G C LG KC HPK + G +R+ +
Sbjct: 91 YTRGFCRHGNSCRNKHYKKRMCFNYEA-GFCPLGKKCPYGHPKFETIGADYQRTEQ 145
Score = 43.1 bits (100), Expect = 2.0, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 10/81 (12%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DP-SKIAVCTKFLKGLCSNSD-CKLTHKVIPERM 1946
K C FF+++G+C+ N C ++H DP SK C + +G C + + C+ H +RM
Sbjct: 56 KMPECWFFSKYGECS--NQDCLFLHIDPNSKSKECIWYTRGFCRHGNSCRNKH--YKKRM 111
Query: 1947 PDCSYFLQGLCT-NKNCPYRH 1966
C + G C K CPY H
Sbjct: 112 --CFNYEAGFCPLGKKCPYGH 130
>gi|378729714|gb|EHY56173.1| hypothetical protein HMPREF1120_04266 [Exophiala dermatitidis
NIH/UT8656]
Length = 388
Score = 84.3 bits (207), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 67/141 (47%), Gaps = 10/141 (7%)
Query: 1881 HTARLRLARKRKYCQFFTRFGKCNKDNG-KCPYIHDPSKIAVCTKFLKGL--CSNSDCKL 1937
HT RL C ++ G C NG C +HD +K+A+C L + C L
Sbjct: 188 HTGRLT---STHLCSRYSSTGSC--PNGLNCLGLHDDNKLALCPAVLHNVRCLLGQTCDL 242
Query: 1938 THKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSY 1996
+H PER P C +F G C NC Y H V+P+A C+ F GYC G +CR +H
Sbjct: 243 SHVPSPERSPICRFFQIGRCDRGNCVYAHTLVDPDAPLCDDFAYAGYCDRGAQCRYRHLR 302
Query: 1997 VCPTFKATGSCALGAKCRLHH 2017
CP F +T C CRL H
Sbjct: 303 QCPEFASTRGCN-DTGCRLPH 322
>gi|297273512|ref|XP_001086803.2| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein-like [Macaca mulatta]
Length = 162
Score = 84.3 bits (207), Expect = 7e-13, Method: Composition-based stats.
Identities = 42/115 (36%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 1906 DNGKCPYIHDP-SKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKNC 1962
D CP+ HD K+ VC +L+GLC D CK H+ RMP+C ++ + G C+NK C
Sbjct: 34 DRKLCPFRHDRGEKMVVCKHWLRGLCKKGDHCKFLHQYDITRMPECYFYSKFGDCSNKEC 93
Query: 1963 PYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRL 2015
P+ HV + C + +G+C DG C+ +H +C + G C G KCR
Sbjct: 94 PFLHVKPAFKSQDCPWYDQGFCKDGPLCKYRHVPRIMCLNY-LVGFCPEGPKCRF 147
>gi|357625054|gb|EHJ75607.1| cleavage and polyadenylation specific factor 4 [Danaus plexippus]
Length = 287
Score = 84.3 bits (207), Expect = 7e-13, Method: Composition-based stats.
Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 1894 CQFFTRFGKCNKDNG-KCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCS 1950
C+F+++ G C NG +CPY H + VC +L+GLC D C+ H+ +MP+C
Sbjct: 41 CEFYSQPGGCG--NGPQCPYRHVRGDRTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECY 98
Query: 1951 YFLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSC 2007
++ + C NK CP+ H+ C + +G+C G CR +H +C + A G C
Sbjct: 99 FYARFNACHNKECPFLHIDPESKIKDCPWYDRGFCRHGPHCRHRHVRRVLCINYLA-GFC 157
Query: 2008 ALGAKCRLHHPK 2019
GA C+ HP+
Sbjct: 158 PDGANCKYMHPR 169
Score = 45.1 bits (105), Expect = 0.42, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 44/107 (41%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F+ RF C+ N +CP++H DP ++ D
Sbjct: 93 KMPECYFYARFNACH--NKECPFLHIDPE--------------------------SKIKD 124
Query: 1949 CSYFLQGLCTN-KNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + +C +RHV C +L G+C DG C+ H
Sbjct: 125 CPWYDRGFCRHGPHCRHRHVR----RVLCINYLAGFCPDGANCKYMH 167
>gi|126334486|ref|XP_001363797.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Monodelphis domestica]
gi|395514828|ref|XP_003761614.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 4
isoform 1 [Sarcophilus harrisii]
Length = 269
Score = 84.3 bits (207), Expect = 8e-13, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G CR +H+ +C + G C
Sbjct: 99 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGPSCKFMHPR 168
Score = 42.4 bits (98), Expect = 3.1, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F+++FG+C+ N +CP++H DP ++ D
Sbjct: 92 KMPECYFYSKFGECS--NKECPFLHIDPE--------------------------SKIKD 123
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + C +RH C +L G+C +G C+ H
Sbjct: 124 CPWYDRGFCKHGPLCRHRHTR----RVICVNYLVGFCPEGPSCKFMH 166
>gi|281349874|gb|EFB25458.1| hypothetical protein PANDA_013548 [Ailuropoda melanoleuca]
Length = 252
Score = 84.0 bits (206), Expect = 9e-13, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G CR +H+ +C + G C
Sbjct: 99 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGPSCKFMHPR 168
Score = 42.4 bits (98), Expect = 3.4, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F+++FG+C+ N +CP++H DP ++ D
Sbjct: 92 KMPECYFYSKFGECS--NKECPFLHIDPE--------------------------SKIKD 123
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + C +RH C +L G+C +G C+ H
Sbjct: 124 CPWYDRGFCKHGPLCRHRHTR----RVICVNYLVGFCPEGPSCKFMH 166
>gi|344289700|ref|XP_003416579.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Loxodonta africana]
Length = 269
Score = 84.0 bits (206), Expect = 9e-13, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G CR +H+ +C + G C
Sbjct: 99 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGPSCKFMHPR 168
Score = 42.4 bits (98), Expect = 3.4, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F+++FG+C+ N +CP++H DP ++ D
Sbjct: 92 KMPECYFYSKFGECS--NKECPFLHIDPE--------------------------SKIKD 123
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + C +RH C +L G+C +G C+ H
Sbjct: 124 CPWYDRGFCKHGPLCRHRHTR----RVICVNYLVGFCPEGPSCKFMH 166
>gi|149054707|gb|EDM06524.1| similar to hypothetical protein D11Ertd636e (predicted), isoform
CRA_a [Rattus norvegicus]
Length = 152
Score = 83.6 bits (205), Expect = 1e-12, Method: Composition-based stats.
Identities = 46/126 (36%), Positives = 65/126 (51%), Gaps = 11/126 (8%)
Query: 1910 CPYIHDP-SKIAVCTKFLKGLCSNSDC-KLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRH 1966
CP H+ K+ VC +L+GLC SDC H+ RMP C + + G C NK CP+ H
Sbjct: 3 CPLRHEQGEKMVVCKHWLRGLCRKSDCCNFLHQYDVSRMPVCYFHSKFGNCNNKECPFLH 62
Query: 1967 VHVNPNASTCEGFLKGYCADGDECRKKHSY--VCPTFKATGSCALGAKCRLHHPK----- 2019
+ P C + +G+C +G C+ +H + +CP + G C G KC+ HPK
Sbjct: 63 LKPVPKLQDCPWYDQGFCKEGPLCKYRHVHQVLCPNY-FIGFCPKGPKCQFGHPKMSPIL 121
Query: 2020 SRSNGK 2025
RSN K
Sbjct: 122 HRSNMK 127
Score = 56.2 bits (134), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/130 (27%), Positives = 54/130 (41%), Gaps = 35/130 (26%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFL 1953
C F ++FG CN N +CP++H K +P ++ DC ++
Sbjct: 44 CYFHSKFGNCN--NKECPFLH------------------------LKPVP-KLQDCPWYD 76
Query: 1954 QGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALGAK 2012
QG C C YRHVH C + G+C G +C+ H + P + + AK
Sbjct: 77 QGFCKEGPLCKYRHVH----QVLCPNYFIGFCPKGPKCQFGHPKMSPILHRSN---MKAK 129
Query: 2013 CRLHHPKSRS 2022
+HH K S
Sbjct: 130 ATVHHQKRWS 139
>gi|387015182|gb|AFJ49710.1| Cleavage and polyadenylation specificity factor subunit 4-like
[Crotalus adamanteus]
Length = 268
Score = 83.6 bits (205), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CDFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G CR +H+ +C + G C
Sbjct: 99 YSKYGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGPACKFMHPR 168
Score = 41.2 bits (95), Expect = 7.0, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F++++G+C+ N +CP++H DP ++ D
Sbjct: 92 KMPECYFYSKYGECS--NKECPFLHIDPE--------------------------SKIKD 123
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + C +RH C +L G+C +G C+ H
Sbjct: 124 CPWYDRGFCKHGPLCRHRHTR----RVICVNYLVGFCPEGPACKFMH 166
>gi|109492168|ref|XP_001081632.1| PREDICTED: cleavage and polyadenylation specific factor 4-like
[Rattus norvegicus]
gi|392351710|ref|XP_221075.5| PREDICTED: cleavage and polyadenylation specific factor 4-like
[Rattus norvegicus]
Length = 228
Score = 83.6 bits (205), Expect = 1e-12, Method: Composition-based stats.
Identities = 51/148 (34%), Positives = 73/148 (49%), Gaps = 9/148 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDP-SKIAVCTKFLKGLCSNSDC-KLTHKVIPERMPDCSY 1951
C FF + G C K CP H+ K+ VC +L+GLC SDC H+ RMP C +
Sbjct: 41 CNFFAK-GLCVK-GMLCPLRHEQGEKMVVCKHWLRGLCRKSDCCNFLHQYDVSRMPVCYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCAD-GDECRKKHSY--VCPTFKATGSC 2007
+ G C NK CP+ H+ P C + +G+C + G C+ +H + +CP + G C
Sbjct: 99 HSKFGNCNNKECPFLHLKPVPKLQDCPWYDQGFCKEVGPLCKYRHVHQVLCPNY-FIGFC 157
Query: 2008 ALGAKCRLHHPKSRSNGKKSRRSRKPKN 2035
G KC+ HPK +S +P N
Sbjct: 158 PKGPKCQFGHPKMSPILHRSNMKLQPIN 185
>gi|327288272|ref|XP_003228852.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Anolis carolinensis]
Length = 269
Score = 83.6 bits (205), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CDFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G CR +H+ +C + G C
Sbjct: 99 YSKYGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGPACKFMHPR 168
Score = 41.2 bits (95), Expect = 7.0, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F++++G+C+ N +CP++H DP ++ D
Sbjct: 92 KMPECYFYSKYGECS--NKECPFLHIDPE--------------------------SKIKD 123
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + C +RH C +L G+C +G C+ H
Sbjct: 124 CPWYDRGFCKHGPLCRHRHTR----RVICVNYLVGFCPEGPACKFMH 166
>gi|392332511|ref|XP_003752602.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Rattus norvegicus]
Length = 247
Score = 83.6 bits (205), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 8/133 (6%)
Query: 1894 CQFFTRF--GKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDC 1949
C+FF + GK G CP+ H K VC +L+GLC D C+ H+ +MP+C
Sbjct: 41 CEFFLKAACGKVQLLGGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPEC 100
Query: 1950 SYFLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGS 2006
++ + G C+NK CP+ H+ C + +G+C G CR + + +C + G
Sbjct: 101 YFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRRTRRVICVNY-LVGF 159
Query: 2007 CALGAKCRLHHPK 2019
C G C+ HP+
Sbjct: 160 CPEGPSCKFMHPR 172
Score = 42.4 bits (98), Expect = 2.7, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 14/83 (16%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DP-SKIAVCTKFLKGLCSNSDC---KLTHKVIPE 1944
K C F+++FG+C+ N +CP++H DP SKI C + +G C + + T +VI
Sbjct: 96 KMPECYFYSKFGECS--NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRRTRRVI-- 151
Query: 1945 RMPDCSYFLQGLC-TNKNCPYRH 1966
C +L G C +C + H
Sbjct: 152 ----CVNYLVGFCPEGPSCKFMH 170
>gi|74025542|ref|XP_829337.1| cleavage and polyadenylation specificity factor 30 kDa subunit
[Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|29825363|gb|AAO92322.1| cleavage and polyadenylation specificity factor 30 kDa subunit
[Trypanosoma brucei rhodesiense]
gi|70834723|gb|EAN80225.1| cleavage and polyadenylation specificity factor 30 kDa subunit
[Trypanosoma brucei brucei strain 927/4 GUTat10.1]
Length = 277
Score = 83.6 bits (205), Expect = 1e-12, Method: Composition-based stats.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 10/139 (7%)
Query: 1888 ARKRKYCQFFTRFGKCNKDNGKCPYIHDPS-----KIAVCTKFLKGLCSNSD-CKLTHKV 1941
A++ + CQ F + GKC ++ CP H S ++ VC +L+G C N + C H+
Sbjct: 25 AKRSEICQPF-QHGKC-RNGAACPERHVLSQFKSMRLEVCKHWLRGACVNGENCVYLHEY 82
Query: 1942 IPERMPDCSYFLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCP- 1999
+P C+++ + G C+N CP++HV C + +G+C G +CR +H + P
Sbjct: 83 DDRYVPACAFYQRLGECSNPECPFQHVVQVERQPECAAYRRGFCPLGPKCRLRHVFRPPC 142
Query: 2000 TFKATGSCALGAKCRLHHP 2018
F TG C LG KC L HP
Sbjct: 143 VFYLTGFCPLGPKCALGHP 161
>gi|344291043|ref|XP_003417246.1| PREDICTED: LOW QUALITY PROTEIN: putative cleavage and polyadenylation
specificity factor subunit 4-like protein-like [Loxodonta
africana]
Length = 185
Score = 83.6 bits (205), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/127 (34%), Positives = 66/127 (51%), Gaps = 8/127 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDPS-KIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C FFT+ G C K +CP+ HD + VC +L+GLC D C H+ RMP+C +
Sbjct: 41 CTFFTK-GLCGKGK-RCPFRHDSGGRTVVCKHWLRGLCKKGDQCHFLHQYDVARMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSY--VCPTFKATGSCA 2008
+ + G C NK C + HV C + +G+C +G C+ +H + +C + A G C
Sbjct: 99 YSKFGDCNNKECSFLHVKPASKTQDCPWYDQGFCKNGPLCKYRHIHRVMCINYLA-GFCP 157
Query: 2009 LGAKCRL 2015
G KC+
Sbjct: 158 EGPKCQF 164
>gi|255722107|ref|XP_002545988.1| hypothetical protein CTRG_00769 [Candida tropicalis MYA-3404]
gi|240136477|gb|EER36030.1| hypothetical protein CTRG_00769 [Candida tropicalis MYA-3404]
Length = 236
Score = 83.6 bits (205), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 56/115 (48%), Gaps = 7/115 (6%)
Query: 1910 CPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHV-- 1967
C Y+HD I +C FL G C DC L+H P C Y+L CTN NC YRH
Sbjct: 8 CKYVHDKDMIRICPLFLAGKCYGRDCLLSHTPNDCNTPVCRYYLDRTCTNSNCKYRHFKP 67
Query: 1968 --HVNPNAS--TCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
+ +PN TC F + GYCA G +C H CP F+ C G +C L H
Sbjct: 68 DHYDDPNYEILTCRPFAITGYCARGKKCPFLHLPSCPDFEEDNYCRYGRECSLPH 122
>gi|344304083|gb|EGW34332.1| hypothetical protein SPAPADRAFT_54484 [Spathaspora passalidarum NRRL
Y-27907]
Length = 232
Score = 83.2 bits (204), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 69/141 (48%), Gaps = 9/141 (6%)
Query: 1900 FGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLCTN 1959
G C K C YIHD +KI +C FL G C N +C L+H C YFL+ C N
Sbjct: 4 LGFCQK-GSTCKYIHDKNKIKICPLFLSGKCFNRNCLLSHSCNDNNTAMCRYFLEYKCHN 62
Query: 1960 KNCPYRHV----HVNPNAS--TCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAK 2012
NC YRH+ + +PN TC F + G+C G C H CP F+ G C+ +
Sbjct: 63 SNCKYRHMKPPHYDDPNYEIWTCRPFAIGGWCPRGKRCPFLHLPNCPDFEENGYCSRKQE 122
Query: 2013 CRLHHPKS-RSNGKKSRRSRK 2032
C +H + R+ + S RS K
Sbjct: 123 CPFNHQVTLRTQEQISTRSNK 143
>gi|401416519|ref|XP_003872754.1| putative cleavage and polyadenylation specificity factor 30 kDa
subunit [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322488979|emb|CBZ24228.1| putative cleavage and polyadenylation specificity factor 30 kDa
subunit [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 343
Score = 83.2 bits (204), Expect = 2e-12, Method: Composition-based stats.
Identities = 50/143 (34%), Positives = 72/143 (50%), Gaps = 13/143 (9%)
Query: 1886 RLARKRKYCQFFTRFGKCNKDNGKCPYIHDPS-----KIAVCTKFLKGLCSNSD-CKLTH 1939
R +K + CQ F R G+C + CP H S + VC +L+G C N D C H
Sbjct: 23 RTEKKLEICQDFQR-GRCRLGDA-CPQRHIISAYRTVQTKVCKHWLRGACVNGDNCLYLH 80
Query: 1940 KVIPERMPDCSYFLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH---S 1995
+ +P C++F + G CTN CP+ H N + C + +G+C G +CR +H +
Sbjct: 81 EYDNRYVPQCAFFERVGECTNPECPFLHTKPNESQPECAAYRRGFCPLGPKCRLRHVKRA 140
Query: 1996 YVCPTFKATGSCALGAKCRLHHP 2018
CP + A G C LG +C L HP
Sbjct: 141 SACPYYLA-GFCPLGPRCPLGHP 162
>gi|350581420|ref|XP_003481031.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Sus scrofa]
Length = 422
Score = 83.2 bits (204), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 194 CEFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 251
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G CR +H+ +C + G C
Sbjct: 252 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCP 310
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 311 EGPSCKFMHPR 321
Score = 42.4 bits (98), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 14/83 (16%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DP-SKIAVCTKFLKGLCSNSD-CKLTH--KVIPE 1944
K C F+++FG+C+ N +CP++H DP SKI C + +G C + C+ H +VI
Sbjct: 245 KMPECYFYSKFGECS--NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVI-- 300
Query: 1945 RMPDCSYFLQGLCT-NKNCPYRH 1966
C +L G C +C + H
Sbjct: 301 ----CVNYLVGFCPEGPSCKFMH 319
>gi|343470800|emb|CCD16609.1| unnamed protein product [Trypanosoma congolense IL3000]
gi|343470954|emb|CCD16504.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 277
Score = 83.2 bits (204), Expect = 2e-12, Method: Composition-based stats.
Identities = 46/138 (33%), Positives = 72/138 (52%), Gaps = 10/138 (7%)
Query: 1889 RKRKYCQFFTRFGKCNKDNGKCPYIHDPS-----KIAVCTKFLKGLCSNSD-CKLTHKVI 1942
++R+ CQ F + GKC + CP H S ++ VC +L+G C N + C H+
Sbjct: 26 KRREICQPF-QHGKC-RHGAACPERHVLSQFKTMRLEVCKHWLRGACVNGENCVYLHEYD 83
Query: 1943 PERMPDCSYFLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCP-T 2000
+P C+++ + G C+N CP++HV C + +G+C G +CR +H + P
Sbjct: 84 DRYVPACAFYQRLGECSNPECPFQHVVQVERQPECAAYRRGFCPMGPKCRLRHVFRQPCV 143
Query: 2001 FKATGSCALGAKCRLHHP 2018
F TG C LG KC + HP
Sbjct: 144 FYITGFCPLGPKCDMGHP 161
>gi|339896984|ref|XP_001463534.2| putative cleavage and polyadenylation specificity factor 30 kDa
subunit [Leishmania infantum JPCM5]
gi|398011122|ref|XP_003858757.1| cleavage and polyadenylation specificity factor 30 kDa subunit,
putative [Leishmania donovani]
gi|321399000|emb|CAM65899.2| putative cleavage and polyadenylation specificity factor 30 kDa
subunit [Leishmania infantum JPCM5]
gi|322496967|emb|CBZ32037.1| cleavage and polyadenylation specificity factor 30 kDa subunit,
putative [Leishmania donovani]
Length = 336
Score = 82.8 bits (203), Expect = 2e-12, Method: Composition-based stats.
Identities = 50/143 (34%), Positives = 71/143 (49%), Gaps = 13/143 (9%)
Query: 1886 RLARKRKYCQFFTRFGKCNKDNGKCPYIHDPS-----KIAVCTKFLKGLCSNSD-CKLTH 1939
R +K + CQ F R G+C + CP H S + VC +L+G C N D C H
Sbjct: 23 RTEKKLEICQDFQR-GRCRLGDA-CPQRHIISAYRTVQTKVCKHWLRGACVNGDNCLYLH 80
Query: 1940 KVIPERMPDCSYFLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH---S 1995
+ +P C++F + G CTN CP+ H N + C + +G+C G +CR +H
Sbjct: 81 EYDNRYVPQCAFFERVGECTNPECPFLHTKPNESQPECAAYRRGFCPLGPKCRLRHVKRE 140
Query: 1996 YVCPTFKATGSCALGAKCRLHHP 2018
CP + A G C LG +C L HP
Sbjct: 141 SACPYYLA-GFCPLGPRCPLGHP 162
>gi|328770159|gb|EGF80201.1| hypothetical protein BATDEDRAFT_5960, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 147
Score = 82.4 bits (202), Expect = 3e-12, Method: Composition-based stats.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 10/128 (7%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDPSKI--AVCTKFLKGLCSNSD-CKLTHKVIPERMPDCS 1950
C F R G C + CP+ H P K+ VC +L+GLC + C+ H+ +RMP+C
Sbjct: 24 CTHFIR-GAC-RQGSSCPFQH-PQKMRAVVCKHWLRGLCKKGEVCEFLHEYNMKRMPECW 80
Query: 1951 YFLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSY--VCPTFKATGSC 2007
+F + G CTN C Y H+ + C + +G+C G ECR KH+ C + TG C
Sbjct: 81 FFAKLGECTNPECQYLHIDPDSKIRECPWYARGFCKHGAECRHKHTRKAACQNY-LTGFC 139
Query: 2008 ALGAKCRL 2015
G C+
Sbjct: 140 PNGESCQF 147
Score = 43.5 bits (101), Expect = 1.5, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 11/90 (12%)
Query: 1941 VIPERMPDCSYFLQGLC-TNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSY--- 1996
V P P C++F++G C +CP++H A C+ +L+G C G+ C H Y
Sbjct: 16 VKPPIKPICTHFIRGACRQGSSCPFQHPQ-KMRAVVCKHWLRGLCKKGEVCEFLHEYNMK 74
Query: 1997 ---VCPTFKATGSCALGAKCRLHH--PKSR 2021
C F G C +C+ H P S+
Sbjct: 75 RMPECWFFAKLGECT-NPECQYLHIDPDSK 103
>gi|332028091|gb|EGI68142.1| Cleavage and polyadenylation specificity factor subunit 4 [Acromyrmex
echinatior]
Length = 290
Score = 82.4 bits (202), Expect = 3e-12, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
CQF+ + G CNK CP+ H + VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CQFYPK-GSCNK-GASCPFRHVRGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCA 2008
+ + C NK CP+ H+ C + +G+C G CR +H +C + A G C
Sbjct: 99 YSRFNACHNKECPFLHIDPETKVRDCPWYDRGFCRHGPLCRHRHVRRVLCMAYLA-GFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGPNCKFMHPR 168
Score = 42.4 bits (98), Expect = 3.1, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F++RF C+ N +CP++H DP ++ D
Sbjct: 92 KMPECYFYSRFNACH--NKECPFLHIDPET--------------------------KVRD 123
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + C +RHV C +L G+C +G C+ H
Sbjct: 124 CPWYDRGFCRHGPLCRHRHVR----RVLCMAYLAGFCPEGPNCKFMH 166
>gi|157865076|ref|XP_001681246.1| putative cleavage and polyadenylation specificity factor 30 kDa
subunit [Leishmania major strain Friedlin]
gi|68124541|emb|CAJ02669.1| putative cleavage and polyadenylation specificity factor 30 kDa
subunit [Leishmania major strain Friedlin]
Length = 339
Score = 82.0 bits (201), Expect = 3e-12, Method: Composition-based stats.
Identities = 50/143 (34%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 1886 RLARKRKYCQFFTRFGKCNKDNGKCPYIHDPS-----KIAVCTKFLKGLCSNSD-CKLTH 1939
R +K + CQ F R G+C + CP H S + VC +L+G C N D C H
Sbjct: 23 RAEKKLEICQDFQR-GRCRLGDA-CPQRHIISAYRTVQTKVCKHWLRGACVNGDNCLYLH 80
Query: 1940 KVIPERMPDCSYFLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH---S 1995
+P C++F + G CTN CP+ H N + C + +G+C G +CR +H
Sbjct: 81 AYDNRYVPQCAFFERVGECTNPECPFLHTKPNESQPECAAYRRGFCPLGPKCRLRHVKRE 140
Query: 1996 YVCPTFKATGSCALGAKCRLHHP 2018
CP + A G C LG +C L HP
Sbjct: 141 SACPYYLA-GFCPLGPRCPLGHP 162
>gi|432870755|ref|XP_004071832.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Oryzias latipes]
Length = 265
Score = 82.0 bits (201), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 69/131 (52%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + G C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFMK-GTCMK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G +CR +H+ +C + G C
Sbjct: 99 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPDCRHRHTRRVICVNY-LVGFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGKSCKFMHPR 168
>gi|237681208|ref|NP_001153741.1| cleavage and polyadenylation specific factor 4, 30kDa [Tribolium
castaneum]
gi|270004678|gb|EFA01126.1| hypothetical protein TcasGA2_TC010339 [Tribolium castaneum]
Length = 280
Score = 82.0 bits (201), Expect = 3e-12, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 7/131 (5%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
CQF+T C K +CP+ H + VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CQFYTSIQGCQK-GPQCPFRHVRGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 99
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCA 2008
+ + C NK CP+ H+ C + +G+C G CR +H +C + A G C
Sbjct: 100 YSRFNACHNKECPFLHIDPESKIKDCPWYDRGFCRHGPHCRHRHVRRVLCTNYLA-GFCP 158
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 159 EGPNCKYMHPR 169
Score = 44.7 bits (104), Expect = 0.57, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 10/81 (12%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DP-SKIAVCTKFLKGLCSNS-DCKLTHKVIPERM 1946
K C F++RF C+ N +CP++H DP SKI C + +G C + C+ H R
Sbjct: 93 KMPECYFYSRFNACH--NKECPFLHIDPESKIKDCPWYDRGFCRHGPHCRHRHV----RR 146
Query: 1947 PDCSYFLQGLC-TNKNCPYRH 1966
C+ +L G C NC Y H
Sbjct: 147 VLCTNYLAGFCPEGPNCKYMH 167
>gi|307183125|gb|EFN70042.1| Cleavage and polyadenylation specificity factor subunit 4 [Camponotus
floridanus]
Length = 287
Score = 82.0 bits (201), Expect = 3e-12, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
CQF+ R G C+K CP+ H + VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CQFYPR-GTCSK-GASCPFRHVRGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCA 2008
+ + C NK CP+ H+ C + +G+C G CR +H +C + A G C
Sbjct: 99 YSRFNACHNKECPFLHIDPETKVRDCPWYDRGFCRHGPLCRHRHVRRVLCMAYLA-GFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGPNCKFMHPR 168
Score = 42.7 bits (99), Expect = 2.4, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F++RF C+ N +CP++H DP ++ D
Sbjct: 92 KMPECYFYSRFNACH--NKECPFLHIDPET--------------------------KVRD 123
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + C +RHV C +L G+C +G C+ H
Sbjct: 124 CPWYDRGFCRHGPLCRHRHVR----RVLCMAYLAGFCPEGPNCKFMH 166
>gi|335284056|ref|XP_003354505.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Sus scrofa]
Length = 244
Score = 82.0 bits (201), Expect = 4e-12, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +C G CR +H+ +C + G C
Sbjct: 99 YSKFGECSNKECPFLHIDPESKIKDCPWYDARFCKHGPLCRHRHTRRVICVNY-LVGFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGPSCKFMHPR 168
>gi|221105106|ref|XP_002156784.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Hydra magnipapillata]
Length = 344
Score = 82.0 bits (201), Expect = 4e-12, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C FF +C + CP H ++ VC +L+GLC D C+ HK E+MP+C +
Sbjct: 41 CDFFIS-NRCTRGQ-LCPLRHISGHQMVVCKHWLRGLCKKGDNCEFLHKYDMEKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH-------SYVCPTFKA 2003
+++ G C+NK CP+ H+ C + +G+C G C+ +H +Y+C
Sbjct: 99 YIKYGQCSNKECPFLHLDPADKIKDCAWYERGFCKHGPHCKNRHVRRLMCINYMC----- 153
Query: 2004 TGSCALGAKCRLHHP 2018
G C G KC+ HP
Sbjct: 154 -GFCPDGKKCKYAHP 167
Score = 47.0 bits (110), Expect = 0.12, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F+ ++G+C+ N +CP++H DP+ +++ D
Sbjct: 92 KMPECYFYIKYGQCS--NKECPFLHLDPA--------------------------DKIKD 123
Query: 1949 CSYFLQGLCTN-KNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C+++ +G C + +C RHV C ++ G+C DG +C+ H
Sbjct: 124 CAWYERGFCKHGPHCKNRHVR----RLMCINYMCGFCPDGKKCKYAH 166
>gi|241711939|ref|XP_002412070.1| cleavage and polyadenylation specificity factor, putative [Ixodes
scapularis]
gi|215505142|gb|EEC14636.1| cleavage and polyadenylation specificity factor, putative [Ixodes
scapularis]
Length = 281
Score = 82.0 bits (201), Expect = 4e-12, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 69/136 (50%), Gaps = 18/136 (13%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C F+ + G C+K + CP+ H + VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CCFYVQ-GNCSKASA-CPFRHVKGDRTVVCKHWLRGLCKKGDQCEFLHEFDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS-------YVCPTFKA 2003
+ + C+NK+CP+ H+ C + +G+C G CR +H+ Y+C
Sbjct: 99 YSRFNACSNKDCPFLHIDPEAKIKDCPWYDRGFCRHGPNCRHRHTRRVMCLNYLC----- 153
Query: 2004 TGSCALGAKCRLHHPK 2019
G C G +C+ HPK
Sbjct: 154 -GFCPEGPECKFMHPK 168
>gi|307200583|gb|EFN80724.1| Cleavage and polyadenylation specificity factor subunit 4
[Harpegnathos saltator]
Length = 285
Score = 81.6 bits (200), Expect = 4e-12, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
CQF+ R G C K CP+ H + VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CQFYPR-GTCVK-GASCPFRHVRGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCA 2008
+ + C NK CP+ H+ C + +G+C G CR +H +C + A G C
Sbjct: 99 YSRFNACHNKECPFLHIDPETKVRDCPWYDRGFCRHGPLCRHRHVRRVLCMAYLA-GFCP 157
Query: 2009 LGAKCRLHHPK 2019
G+ C+ HP+
Sbjct: 158 EGSNCKFMHPR 168
Score = 43.5 bits (101), Expect = 1.4, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F++RF C+ N +CP++H DP ++ D
Sbjct: 92 KMPECYFYSRFNACH--NKECPFLHIDPET--------------------------KVRD 123
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + C +RHV C +L G+C +G C+ H
Sbjct: 124 CPWYDRGFCRHGPLCRHRHVR----RVLCMAYLAGFCPEGSNCKFMH 166
>gi|242021708|ref|XP_002431285.1| Cleavage and polyadenylation specificity factor 30 kDa subunit,
putative [Pediculus humanus corporis]
gi|212516553|gb|EEB18547.1| Cleavage and polyadenylation specificity factor 30 kDa subunit,
putative [Pediculus humanus corporis]
Length = 233
Score = 81.6 bits (200), Expect = 4e-12, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C F+ + G CNK CP+ H + VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CTFYPK-GTCNK-GAACPFRHIRGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCA 2008
+ + C NK CP+ H+ C + +G+C G CR +H +C + A G C
Sbjct: 99 YSRFNACHNKECPFLHIDPESKIKDCPWYDRGFCRHGPHCRHRHVRRVLCMNYLA-GFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 DGPDCKFMHPR 168
Score = 47.8 bits (112), Expect = 0.070, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F++RF C+ N +CP++H DP ++ D
Sbjct: 92 KMPECYFYSRFNACH--NKECPFLHIDPE--------------------------SKIKD 123
Query: 1949 CSYFLQGLCTN-KNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + +C +RHV C +L G+C DG +C+ H
Sbjct: 124 CPWYDRGFCRHGPHCRHRHVR----RVLCMNYLAGFCPDGPDCKFMH 166
>gi|321469733|gb|EFX80712.1| hypothetical protein DAPPUDRAFT_51128 [Daphnia pulex]
Length = 242
Score = 81.6 bits (200), Expect = 5e-12, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C FT+ G+C + + CPY H + VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CTLFTK-GQCQRAS-FCPYRHLRADRTIVCKHWLRGLCKKGDQCEFLHEFDMAKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCA 2008
+ + C NK CP+ H+ C + +G+C G CR +H +C + A G C
Sbjct: 99 YARFSACHNKECPFLHIDPETKIKDCPWYDRGFCRHGPTCRHRHVRRVLCMNYTA-GFCP 157
Query: 2009 LGAKCRLHHPK 2019
G +C+ HP+
Sbjct: 158 DGPECKFVHPR 168
>gi|147778600|emb|CAN64620.1| hypothetical protein VITISV_032797 [Vitis vinifera]
Length = 890
Score = 81.6 bits (200), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 63/102 (61%), Gaps = 5/102 (4%)
Query: 1337 SSVFTASRDLASSTRTTCTTRPRTWHRTESSSASPAPGNKSLLPPQNQLPKKVAKYQSMS 1396
S +FT S+ ASST RPRTW+RT++SS+S PPQ + ++ K Q S
Sbjct: 95 SVLFTHSKKTASSTHIA---RPRTWYRTDASSSSLKKSFSIAFPPQRK--SEIGKVQGAS 149
Query: 1397 YIRKGNSLVRKPAPVAAVSQISHGLTSSVYWLNSSGIGESKK 1438
YI KG SLVRKPA V +SQ HGL+S VY LN SG+ + +K
Sbjct: 150 YIHKGISLVRKPALVVVLSQDLHGLSSFVYRLNPSGVDKMRK 191
>gi|440793786|gb|ELR14960.1| CCCH zinc finger protein, putative [Acanthamoeba castellanii str.
Neff]
Length = 332
Score = 81.6 bits (200), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Query: 1946 MPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATG 2005
+P C FL G C +++CPY HV+VNP A+ CE FL GYC G C+ H+Y C T+ TG
Sbjct: 142 LPVCFRFLLGSCFDEHCPYPHVNVNPLAAVCEDFLAGYCPQGSACKLLHTYECQTWVRTG 201
Query: 2006 SCALGAKCRLHHPKSRSNGKKSRRSRKP 2033
C +CR HP+ N + RR +P
Sbjct: 202 ECD-DTQCRFKHPR---NVRGRRRLAEP 225
>gi|119597072|gb|EAW76666.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform CRA_e
[Homo sapiens]
Length = 229
Score = 81.3 bits (199), Expect = 5e-12, Method: Composition-based stats.
Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 8/127 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 101 CEFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 158
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G CR +H+ +C + G C
Sbjct: 159 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCP 217
Query: 2009 LGAKCRL 2015
G C+
Sbjct: 218 EGPSCKF 224
Score = 43.1 bits (100), Expect = 1.6, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 34/104 (32%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F+++FG+C+ N +CP++H DP ++ D
Sbjct: 152 KMPECYFYSKFGECS--NKECPFLHIDPE--------------------------SKIKD 183
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECR 1991
C ++ +G C + C +RH C +L G+C +G C+
Sbjct: 184 CPWYDRGFCKHGPLCRHRHTR----RVICVNYLVGFCPEGPSCK 223
>gi|410981626|ref|XP_003997168.1| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein [Felis catus]
Length = 166
Score = 81.3 bits (199), Expect = 5e-12, Method: Composition-based stats.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 10/128 (7%)
Query: 1894 CQFFTRFGKCNKDNGK-CPYIHDP-SKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCS 1950
C FF + G C K GK CP H+ K+ VC +L+GLC D C H+ RMP+C
Sbjct: 41 CNFFAK-GLCEK--GKLCPLRHNRGEKMVVCKHWLRGLCKKGDQCNFLHQYDVTRMPECY 97
Query: 1951 YFLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSC 2007
++ + G C NK CP+ HV C + +G+C DG C+ +H +C + G C
Sbjct: 98 FYSKFGDCNNKECPFLHVKPAFKTRDCPWYDQGFCKDGPLCKHRHVRKIMCANY-FVGFC 156
Query: 2008 ALGAKCRL 2015
G +C+
Sbjct: 157 PEGPRCQF 164
>gi|449016115|dbj|BAM79517.1| similar to cleavage and polyadenylation specific factor 4, 30kD
subunit [Cyanidioschyzon merolae strain 10D]
Length = 188
Score = 81.3 bits (199), Expect = 6e-12, Method: Composition-based stats.
Identities = 42/115 (36%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Query: 1910 CPYIHDPSK-IAVCTKFLKGLCSNS-DCKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRH 1966
C Y H SK + VC +L+GLC +C+ H+ ++MP+C +F + G CTN C YRH
Sbjct: 52 CQYRHSRSKSLIVCKHWLRGLCKKGIECEFVHRFELDKMPECFFFSRYGECTNDECMYRH 111
Query: 1967 VHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPK 2019
V + C + +G+C G CR KH C + G C G CR H K
Sbjct: 112 VVADSRRMECPFYARGFCKHGPRCRYKHVQKVACANYLG-GFCPKGPACRFGHAK 165
>gi|390349051|ref|XP_001201949.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Strongylocentrotus purpuratus]
Length = 294
Score = 80.9 bits (198), Expect = 7e-12, Method: Composition-based stats.
Identities = 39/114 (34%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 1910 CPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRH 1966
CP+ H K VC +L+GLC D C+ H+ +MP+C +F + G+C+NK+CP+ H
Sbjct: 27 CPFRHVKGDKAVVCKHWLRGLCKKGDECEFLHQFDMTKMPECFFFAKFGMCSNKDCPFLH 86
Query: 1967 VHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHP 2018
+ + C + +G+C G C+ +H CP + G C GA C+ HP
Sbjct: 87 IDPDTKRKDCPWYDRGFCKHGPHCKNRHVRRVYCPNY-LLGFCPDGANCKYVHP 139
Score = 45.1 bits (105), Expect = 0.51, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 46/114 (40%), Gaps = 38/114 (33%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C FF +FG C+ N CP++H DP + D
Sbjct: 64 KMPECFFFAKFGMCS--NKDCPFLHIDPDT--------------------------KRKD 95
Query: 1949 CSYFLQGLCTN-KNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTF 2001
C ++ +G C + +C RHV C +L G+C DG C+ YV PTF
Sbjct: 96 CPWYDRGFCKHGPHCKNRHVR----RVYCPNYLLGFCPDGANCK----YVHPTF 141
>gi|346471839|gb|AEO35764.1| hypothetical protein [Amblyomma maculatum]
gi|346471841|gb|AEO35765.1| hypothetical protein [Amblyomma maculatum]
Length = 283
Score = 80.9 bits (198), Expect = 7e-12, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 68/136 (50%), Gaps = 18/136 (13%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C F+ + G C+K + CP+ H + VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CCFYVQ-GNCSKASA-CPFRHVKGDRTVVCKHWLRGLCKKGDQCEFLHEFDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS-------YVCPTFKA 2003
+ + C+NK CP+ H+ C + +G+C G CR +H+ Y+C
Sbjct: 99 YSRFNACSNKECPFLHIDPEAKIKDCPWYDRGFCRHGPSCRHRHTRRVMCINYLC----- 153
Query: 2004 TGSCALGAKCRLHHPK 2019
G C G +C+ HPK
Sbjct: 154 -GFCPDGPECKFMHPK 168
>gi|312377105|gb|EFR24020.1| hypothetical protein AND_11711 [Anopheles darlingi]
Length = 251
Score = 80.9 bits (198), Expect = 7e-12, Method: Composition-based stats.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 11/161 (6%)
Query: 1866 RRARVLASEKVRWSLHTARLRLARKRKYCQFFTRFG--KCNKDNGKCPYIH-DPSKIAVC 1922
+RAR+L R+ L CQFF +C K N CP+ H + VC
Sbjct: 39 QRARILCQRPFRYP--GVPLISESTAAVCQFFNASDGMECKKGN-SCPFRHIRGDRTIVC 95
Query: 1923 TKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRHVHVNPNASTCEGFL 1980
+L+GLC D C+ H+ +MP+C ++ + C NK CP+ H+ C +
Sbjct: 96 KHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPESKIKDCPWYD 155
Query: 1981 KGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPK 2019
+G+C G CR +H +C + A G C G++C+ HP+
Sbjct: 156 RGFCRHGPNCRHRHVRRVLCNNYLA-GFCPDGSECKYMHPR 195
>gi|154332864|ref|XP_001562694.1| putative cleavage and polyadenylation specificity factor 30 kDa
subunit [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134059697|emb|CAM41819.1| putative cleavage and polyadenylation specificity factor 30 kDa
subunit [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 354
Score = 80.9 bits (198), Expect = 8e-12, Method: Composition-based stats.
Identities = 50/143 (34%), Positives = 71/143 (49%), Gaps = 13/143 (9%)
Query: 1886 RLARKRKYCQFFTRFGKCNKDNGKCPYIHDPS-----KIAVCTKFLKGLCSNSD-CKLTH 1939
R +K + CQ F R G+C + CP H S + VC +L+G C N D C H
Sbjct: 23 RTEKKLEICQDFQR-GRCRLGDA-CPQRHIISAYRTVQTKVCKHWLRGACVNGDNCLYLH 80
Query: 1940 KVIPERMPDCSYFLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH---S 1995
+ +P C++F + G CTN CP+ H N + C + +G+C G +CR +H
Sbjct: 81 EYDNRYVPQCAFFERVGECTNPECPFLHTKPNESQPECAAYRRGFCPLGPKCRLRHVKRE 140
Query: 1996 YVCPTFKATGSCALGAKCRLHHP 2018
CP + A G C LG +C L HP
Sbjct: 141 SACPYYLA-GFCPLGPRCPLGHP 162
>gi|261335311|emb|CBH18305.1| CPSF 30 kDa subunit [Trypanosoma brucei gambiense DAL972]
Length = 277
Score = 80.9 bits (198), Expect = 9e-12, Method: Composition-based stats.
Identities = 46/139 (33%), Positives = 72/139 (51%), Gaps = 10/139 (7%)
Query: 1888 ARKRKYCQFFTRFGKCNKDNGKCPYIHDPS-----KIAVCTKFLKGLCSNSD-CKLTHKV 1941
A++ + CQ F + GKC ++ CP H S ++ VC +L+G C N + C H+
Sbjct: 25 AKRSEICQPF-QHGKC-RNGAACPERHVLSQFKSMRLEVCKHWLRGACVNGENCVYLHEY 82
Query: 1942 IPERMPDCSYFLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCP- 1999
+P C+++ + G C+N CP++HV C + +G+C G +CR +H + P
Sbjct: 83 DDRYVPACAFYQRLGECSNPECPFQHVVQVERQPECAAYRRGFCPLGPKCRLRHVFRPPC 142
Query: 2000 TFKATGSCALGAKCRLHHP 2018
F TG C LG KC HP
Sbjct: 143 VFYLTGFCPLGPKCASGHP 161
>gi|256088693|ref|XP_002580461.1| hypothetical protein [Schistosoma mansoni]
gi|350644445|emb|CCD60813.1| hypothetical protein Smp_095670 [Schistosoma mansoni]
Length = 399
Score = 80.5 bits (197), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 67/128 (52%), Gaps = 7/128 (5%)
Query: 1876 VRWSLHTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCS--NS 1933
V+ ++H+ + R +R CQ + R G C+ C Y HD + + +C +FL+ CS +
Sbjct: 203 VQKAVHSLKFR---RRMVCQSYCRTGFCSVQ--PCSYSHDENYLRICPRFLQQSCSLGSK 257
Query: 1934 DCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKK 1993
C L H + P R+P C+Y+ C +CPY HV P + C F +G C G C K+
Sbjct: 258 SCPLAHVLDPCRLPQCTYYESEKCERVHCPYLHVRHPPKTAICSDFSRGRCPLGRLCNKR 317
Query: 1994 HSYVCPTF 2001
H +V +F
Sbjct: 318 HIWVQKSF 325
>gi|268536646|ref|XP_002633458.1| Hypothetical protein CBG06226 [Caenorhabditis briggsae]
Length = 768
Score = 80.5 bits (197), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
Query: 1910 CPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRH 1966
CP H D K VC +L+GLC D C+ H+ +MP+C +F + C+N+ CP+RH
Sbjct: 69 CPLRHIDGEKAVVCKHWLRGLCKKGDQCEFLHEYDLTKMPECFFFSKYSACSNRECPFRH 128
Query: 1967 VHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHP 2018
+ C + +G+C G C+ +H VCP + A G C G C+ HP
Sbjct: 129 IDPETKLKDCPWYDRGFCRHGPYCKHRHRRRAVCPNYLA-GFCPQGPDCQYAHP 181
>gi|344229129|gb|EGV61015.1| hypothetical protein CANTEDRAFT_116139 [Candida tenuis ATCC 10573]
gi|344229130|gb|EGV61016.1| hypothetical protein CANTEDRAFT_116139 [Candida tenuis ATCC 10573]
Length = 193
Score = 80.5 bits (197), Expect = 1e-11, Method: Composition-based stats.
Identities = 50/139 (35%), Positives = 72/139 (51%), Gaps = 12/139 (8%)
Query: 1891 RKYCQFFTRFGKCNKDNG-KCPYIHDP----SKIAVCTKFLKGLCSNSD-CKLTHKVIPE 1944
R CQFF + NG CP H P +KI VC +L+GLC +D C+ H+
Sbjct: 35 RPVCQFFIPQSPNSCPNGSNCPNKHVPPMYNNKI-VCKHWLRGLCKKNDHCEFLHEYNLR 93
Query: 1945 RMPDCSYFLQ-GLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPT 2000
+MP+C ++ + G CT N C Y HV C+ +L+G+C +G +C +H +CP
Sbjct: 94 KMPECLFYSRNGYCTQTNECLYLHVDPQSKIPECQNYLRGFCPEGPKCVNRHVRKIMCPM 153
Query: 2001 FKATGSCALGAKCRLHHPK 2019
F TG C G +C HP+
Sbjct: 154 F-LTGFCPKGPECDYTHPR 171
Score = 44.3 bits (103), Expect = 0.76, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 43/108 (39%), Gaps = 33/108 (30%)
Query: 1889 RKRKYCQFFTRFGKCNKDNGKCPYIH-DP-SKIAVCTKFLKGLCSNSDCKLTHKVIPERM 1946
RK C F++R G C + N +C Y+H DP SKI C +L+G C PE
Sbjct: 93 RKMPECLFYSRNGYCTQTN-ECLYLHVDPQSKIPECQNYLRGFC------------PE-- 137
Query: 1947 PDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C RHV C FL G+C G EC H
Sbjct: 138 ------------GPKCVNRHVR----KIMCPMFLTGFCPKGPECDYTH 169
>gi|345488132|ref|XP_001604679.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Nasonia vitripennis]
Length = 297
Score = 80.5 bits (197), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
CQF+ + G C K CP+ H + VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CQFYPK-GTCTK-GAACPFRHVRGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCA 2008
+ + C NK CP+ H+ C + +G+C G CR +H +C + A G C
Sbjct: 99 YSRFNACHNKECPFLHIDPETKVRDCPWYDRGFCRHGPLCRHRHVRRVLCMAYLA-GFCP 157
Query: 2009 LGAKCRLHHPK 2019
G+ C+ HP+
Sbjct: 158 DGSSCKFMHPR 168
>gi|34784575|gb|AAH57067.1| Cpsf4 protein [Mus musculus]
Length = 159
Score = 80.5 bits (197), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 6/115 (5%)
Query: 1910 CPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRH 1966
CP+ H K VC +L+GLC D C+ H+ +MP+C ++ + G C+NK CP+ H
Sbjct: 2 CPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLH 61
Query: 1967 VHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCALGAKCRLHHPK 2019
+ C + +G+C G CR +H+ +C + G C G C+ HP+
Sbjct: 62 IDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCPEGPSCKFMHPR 115
Score = 44.3 bits (103), Expect = 0.80, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F+++FG+C+ N +CP++H DP ++ D
Sbjct: 39 KMPECYFYSKFGECS--NKECPFLHIDPE--------------------------SKIKD 70
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + C +RH C +L G+C +G C+ H
Sbjct: 71 CPWYDRGFCKHGPLCRHRHTR----RVICVNYLVGFCPEGPSCKFMH 113
>gi|66517749|ref|XP_396082.2| PREDICTED: cleavage and polyadenylation specificity factor subunit 4
[Apis mellifera]
gi|380029307|ref|XP_003698318.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Apis florea]
Length = 286
Score = 80.5 bits (197), Expect = 1e-11, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
CQF+ R G C K CP+ H + VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CQFYPR-GTCVK-GASCPFRHVRGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCA 2008
+ + C NK CP+ H+ C + +G+C G CR +H +C + A G C
Sbjct: 99 YSRFNACHNKECPFLHIDPETKVRDCPWYDRGFCRHGPLCRHRHVRRVLCMAYLA-GFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGPNCKFMHPR 168
Score = 42.4 bits (98), Expect = 2.7, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F++RF C+ N +CP++H DP ++ D
Sbjct: 92 KMPECYFYSRFNACH--NKECPFLHIDPET--------------------------KVRD 123
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + C +RHV C +L G+C +G C+ H
Sbjct: 124 CPWYDRGFCRHGPLCRHRHVR----RVLCMAYLAGFCPEGPNCKFMH 166
>gi|383862768|ref|XP_003706855.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Megachile rotundata]
Length = 286
Score = 80.5 bits (197), Expect = 1e-11, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
CQF+ R G C K CP+ H + VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CQFYPR-GTCVK-GASCPFRHVRGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCA 2008
+ + C NK CP+ H+ C + +G+C G CR +H +C + A G C
Sbjct: 99 YSRFNACHNKECPFLHIDPETKVRDCPWYDRGFCRHGPLCRHRHVRRVLCMAYLA-GFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGPNCKFMHPR 168
Score = 42.4 bits (98), Expect = 2.7, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F++RF C+ N +CP++H DP ++ D
Sbjct: 92 KMPECYFYSRFNACH--NKECPFLHIDPET--------------------------KVRD 123
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + C +RHV C +L G+C +G C+ H
Sbjct: 124 CPWYDRGFCRHGPLCRHRHVR----RVLCMAYLAGFCPEGPNCKFMH 166
>gi|340719465|ref|XP_003398174.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Bombus terrestris]
gi|350410464|ref|XP_003489048.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Bombus impatiens]
Length = 286
Score = 80.5 bits (197), Expect = 1e-11, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
CQF+ R G C K CP+ H + VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CQFYPR-GTCVK-GASCPFRHVRGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCA 2008
+ + C NK CP+ H+ C + +G+C G CR +H +C + A G C
Sbjct: 99 YSRFNACHNKECPFLHIDPETKVRDCPWYDRGFCRHGPLCRHRHVRRVLCMAYLA-GFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGPNCKFMHPR 168
Score = 42.4 bits (98), Expect = 2.7, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F++RF C+ N +CP++H DP ++ D
Sbjct: 92 KMPECYFYSRFNACH--NKECPFLHIDPET--------------------------KVRD 123
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + C +RHV C +L G+C +G C+ H
Sbjct: 124 CPWYDRGFCRHGPLCRHRHVR----RVLCMAYLAGFCPEGPNCKFMH 166
>gi|407404287|gb|EKF29805.1| cleavage and polyadenylation specificity factor 30 kDa subunit,
putative [Trypanosoma cruzi marinkellei]
Length = 271
Score = 80.1 bits (196), Expect = 1e-11, Method: Composition-based stats.
Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 12/152 (7%)
Query: 1889 RKRKYCQFFTRFGKCNKDNGKCPYIHDPS-----KIAVCTKFLKGLCSNSD-CKLTHKVI 1942
++R+ CQ F + GKC + CP H S ++ VC +L+G C N + C H+
Sbjct: 26 KRREICQPF-QHGKC-RHGAACPERHVISQFKTMRLEVCKHWLRGACVNGENCLYLHEYD 83
Query: 1943 PERMPDCSYFLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSY--VCP 1999
+P C+++ + G CTN CP++HV C + +G+C G +C +H + CP
Sbjct: 84 DRYVPLCAFYQRLGECTNPECPFQHVIKVEKQPECAAYRRGFCPLGPQCHLRHVFRPSCP 143
Query: 2000 TFKATGSCALGAKCRLHHPKSRSNGKKSRRSR 2031
+ A G C LG KC + HP + + S R
Sbjct: 144 FYMA-GFCPLGPKCTMGHPIQELHNRNSVSER 174
>gi|13172232|gb|AAK14057.1|AF236664_1 hypothetical zinc-finger protein [Emericella nidulans]
Length = 152
Score = 80.1 bits (196), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 56/101 (55%), Gaps = 4/101 (3%)
Query: 1920 AVCTKFLK-GLCSNSD-CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCE 1977
A+C FL+ G CS + C L+H+ P R P C +FL+G C+N C Y HV V P A C
Sbjct: 33 AICKDFLQTGKCSAGNSCDLSHEPSPHRSPACVHFLRGRCSNPECRYAHVRVTPGAPVCR 92
Query: 1978 GFLK-GYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
F GYC G+ C ++H + CP + TG C CRL H
Sbjct: 93 AFATLGYCDKGETCEERHVHECPDYANTGVCK-KKHCRLPH 132
>gi|226469274|emb|CAX70116.1| Zinc finger CCCH domain-containing protein 3 [Schistosoma japonicum]
Length = 393
Score = 80.1 bits (196), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 62/115 (53%), Gaps = 4/115 (3%)
Query: 1889 RKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCS--NSDCKLTHKVIPERM 1946
R+R CQ + R G C+ + +C Y HD + + +C +FL+ C+ + C L H + P R+
Sbjct: 209 RRRAVCQSYCRTGYCS--SKQCSYSHDKNYLRICPRFLQQNCALGSDSCPLAHVLDPCRL 266
Query: 1947 PDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTF 2001
P C+YF G C +CPY HV + C F +G C G C K+H ++ +F
Sbjct: 267 PQCTYFESGNCERAHCPYLHVKHHFKTVICPDFARGRCPLGRLCNKRHIWIQKSF 321
>gi|301118398|ref|XP_002906927.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108276|gb|EEY66328.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 143
Score = 80.1 bits (196), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 47/74 (63%)
Query: 1921 VCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFL 1980
+C KFLK C + +C L+H+ ++PDC FL+G CT + C YRHV V+ A CE F+
Sbjct: 1 MCRKFLKNECDDPNCLLSHQHDENKVPDCKMFLRGACTREGCKYRHVKVSATAELCEQFM 60
Query: 1981 KGYCADGDECRKKH 1994
KGYC G+ C +H
Sbjct: 61 KGYCPKGEACPLRH 74
>gi|293352395|ref|XP_002727980.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Rattus norvegicus]
Length = 243
Score = 80.1 bits (196), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K + CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFLK-AACGKVH-MCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G CR + + +C + G C
Sbjct: 99 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRRTRRVICVNY-LVGFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGPSCKFMHPR 168
Score = 42.0 bits (97), Expect = 3.6, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 14/83 (16%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DP-SKIAVCTKFLKGLCSNSDC---KLTHKVIPE 1944
K C F+++FG+C+ N +CP++H DP SKI C + +G C + + T +VI
Sbjct: 92 KMPECYFYSKFGECS--NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRRTRRVI-- 147
Query: 1945 RMPDCSYFLQGLC-TNKNCPYRH 1966
C +L G C +C + H
Sbjct: 148 ----CVNYLVGFCPEGPSCKFMH 166
>gi|226486816|emb|CAX74485.1| Zinc finger CCCH domain-containing protein 3 [Schistosoma japonicum]
Length = 393
Score = 80.1 bits (196), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 62/115 (53%), Gaps = 4/115 (3%)
Query: 1889 RKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCS--NSDCKLTHKVIPERM 1946
R+R CQ + R G C+ + +C Y HD + + +C +FL+ C+ + C L H + P R+
Sbjct: 209 RRRAVCQSYCRTGYCS--SKQCSYSHDKNYLRICPRFLQQNCALGSDSCPLAHVLDPCRL 266
Query: 1947 PDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTF 2001
P C+YF G C +CPY HV + C F +G C G C K+H ++ +F
Sbjct: 267 PQCTYFESGNCERAHCPYLHVKHHFKTVICPDFARGRCPLGRLCNKRHIWIQKSF 321
>gi|390176610|ref|XP_001356742.2| GA17582 [Drosophila pseudoobscura pseudoobscura]
gi|388858696|gb|EAL33807.2| GA17582 [Drosophila pseudoobscura pseudoobscura]
Length = 282
Score = 80.1 bits (196), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 6/131 (4%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C F TR G+ CP+ H + VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CNFITRSGQECDKGSACPFRHIRGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 100
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCA 2008
+ + C NK CP+ H+ C + +G+C G CR +H +C + A G C
Sbjct: 101 YSRFNACHNKECPFLHIDPQSKVKDCPWYKRGFCRHGPHCRHQHLRRVLCMNYLA-GFCP 159
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 160 EGPNCKHMHPR 170
Score = 42.4 bits (98), Expect = 2.8, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DP-SKIAVCTKFLKGLCSNSDCKLTHKVIPERMP 1947
K C F++RF C+ N +CP++H DP SK+ C + +G C + P
Sbjct: 94 KMPECYFYSRFNACH--NKECPFLHIDPQSKVKDCPWYKRGFCRHG-------------P 138
Query: 1948 DCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C RH H+ C +L G+C +G C+ H
Sbjct: 139 HC---------------RHQHL--RRVLCMNYLAGFCPEGPNCKHMH 168
>gi|290997884|ref|XP_002681511.1| predicted protein [Naegleria gruberi]
gi|284095135|gb|EFC48767.1| predicted protein [Naegleria gruberi]
Length = 105
Score = 79.7 bits (195), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/105 (36%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 1918 KIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRHVHVNPNAST 1975
K VC +L+GLC D C+ H+ +MP+C +F + G C+N C + H+ T
Sbjct: 2 KEVVCKHWLRGLCKKGDGCEFLHQYKAGKMPECHFFSEYGECSNVECIFLHIKPEDRIKT 61
Query: 1976 CEGFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHP 2018
C + +G+C G +CR KH CP + A G CA G C+ HP
Sbjct: 62 CPWYERGFCKHGPDCRLKHLRKIACPDYLA-GFCAKGPNCKFSHP 105
Score = 45.4 bits (106), Expect = 0.40, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 10/83 (12%)
Query: 1888 ARKRKYCQFFTRFGKCNKDNGKCPYIH--DPSKIAVCTKFLKGLCSNS-DCKLTHKVIPE 1944
A K C FF+ +G+C+ N +C ++H +I C + +G C + DC+L H
Sbjct: 28 AGKMPECHFFSEYGECS--NVECIFLHIKPEDRIKTCPWYERGFCKHGPDCRLKHL---- 81
Query: 1945 RMPDCSYFLQGLCTN-KNCPYRH 1966
R C +L G C NC + H
Sbjct: 82 RKIACPDYLAGFCAKGPNCKFSH 104
>gi|311250935|ref|XP_003124350.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Sus scrofa]
Length = 269
Score = 79.7 bits (195), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +C G CR +H+ +C + G C
Sbjct: 99 YSKFGECSNKECPFLHIDPESKIKDCPWYDARFCKHGPLCRHRHTRRVICVNY-LVGFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGPSCKFMHPR 168
>gi|427788143|gb|JAA59523.1| Putative polyadenylation factor i complex subunit yth1 cpsf subunit
[Rhipicephalus pulchellus]
Length = 283
Score = 79.7 bits (195), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 68/136 (50%), Gaps = 18/136 (13%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C F+ + G C+K + CP+ H + VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CCFYVQ-GNCSKASA-CPFRHVKGDRTVVCKHWLRGLCKKGDQCEFLHEFDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS-------YVCPTFKA 2003
+ + C+NK CP+ H+ C + +G+C G CR +H+ Y+C
Sbjct: 99 YSRFNACSNKECPFLHIDPEAKIKDCPWYDRGFCRHGPICRHRHTRRVMCINYLC----- 153
Query: 2004 TGSCALGAKCRLHHPK 2019
G C G +C+ HPK
Sbjct: 154 -GFCPDGPECKFMHPK 168
>gi|291406461|ref|XP_002719268.1| PREDICTED: cleavage and polyadenylation specific factor 4-like
[Oryctolagus cuniculus]
Length = 184
Score = 79.7 bits (195), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDP-SKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C FF + G C K+ CP+ H+ K VC +L+GLC D C+ H+ RMP+C +
Sbjct: 41 CNFFPK-GPCAKET-LCPFRHEHGEKTVVCKHWLRGLCKKGDHCRFLHRYDATRMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ G C NK C + HV C + +G+C +G C+ +H+ +C + A G C
Sbjct: 99 YSTFGDCNNKECSFLHVKSAVKPRDCPWYEQGFCKNGPLCKYRHTRRTMCLRYLA-GFCP 157
Query: 2009 LGAKCRLHHP 2018
G C+ P
Sbjct: 158 EGPTCQFAQP 167
>gi|312069897|ref|XP_003137896.1| hypothetical protein LOAG_02310 [Loa loa]
Length = 222
Score = 79.7 bits (195), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
Query: 1910 CPYIHD-PSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQGL-CTNKNCPYRH 1966
CP H K VC +L+GLC D C+ H+ +MP+C +F + + C+N+ CP+RH
Sbjct: 76 CPLRHIVGDKAVVCKHWLRGLCKKGDQCEFLHEYDLSKMPECFFFSKYMACSNRECPFRH 135
Query: 1967 VHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHP 2018
+ C + +G+C G C+ +H +CP F A G C G C+ HP
Sbjct: 136 IDPESKIKDCPWYDRGFCRHGPFCKHRHRRRVLCPNFLA-GFCMDGRDCKYAHP 188
Score = 45.4 bits (106), Expect = 0.39, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DP-SKIAVCTKFLKGLCSNSD-CKLTHKVIPERM 1946
K C FF+++ C+ N +CP+ H DP SKI C + +G C + CK H+ R
Sbjct: 113 KMPECFFFSKYMACS--NRECPFRHIDPESKIKDCPWYDRGFCRHGPFCKHRHR----RR 166
Query: 1947 PDCSYFLQGLCTN-KNCPYRHVHVN 1970
C FL G C + ++C Y H N
Sbjct: 167 VLCPNFLAGFCMDGRDCKYAHPSFN 191
>gi|117935458|gb|ABK57069.1| IP02511p [Drosophila melanogaster]
Length = 320
Score = 79.7 bits (195), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGK-CNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCS 1950
C F TR G+ C+K + CP+ H + VC +L+GLC D C+ H+ +MP+C
Sbjct: 65 CNFITRNGQECDKGSA-CPFRHIRGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECY 123
Query: 1951 YFLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSC 2007
++ + C NK CP+ H+ C + +G+C G CR +H +C + A G C
Sbjct: 124 FYSRFNACHNKECPFLHIDPQSKVKDCPWYKRGFCRHGPHCRHQHLRRVLCMDYLA-GFC 182
Query: 2008 ALGAKCRLHHP 2018
G C+ HP
Sbjct: 183 PEGPSCKHMHP 193
Score = 43.9 bits (102), Expect = 0.97, Method: Composition-based stats.
Identities = 42/159 (26%), Positives = 65/159 (40%), Gaps = 45/159 (28%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DP-SKIAVCTKFLKGLCSNSDCKLTHKVIPERMP 1947
K C F++RF C+ N +CP++H DP SK+ C + +G C + P
Sbjct: 118 KMPECYFYSRFNACH--NKECPFLHIDPQSKVKDCPWYKRGFCRHG-------------P 162
Query: 1948 DCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSC 2007
C RH H+ C +L G+C +G C+ H P F+
Sbjct: 163 HC---------------RHQHL--RRVLCMDYLAGFCPEGPSCKHMH----PHFELPPLA 201
Query: 2008 ALGAKCRLHH--PKSRSNGKKSRRSRKPKNTHGRYFGSM 2044
LG K +LH P G+ ++ N+ +Y GS+
Sbjct: 202 ELG-KDQLHKKLPTCHYCGELGHKA----NSCKQYVGSL 235
>gi|429965174|gb|ELA47171.1| hypothetical protein VCUG_01360 [Vavraia culicis 'floridensis']
Length = 187
Score = 79.3 bits (194), Expect = 2e-11, Method: Composition-based stats.
Identities = 48/145 (33%), Positives = 77/145 (53%), Gaps = 10/145 (6%)
Query: 1882 TARLRLARKRK-YCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCS-NSDCKLT 1938
T L+L K + YC+ F + +C N +C +H K VC +L+GLC N C+
Sbjct: 15 TTNLKLKEKDEIYCKPFQK-SQCF--NPRCQKLHVKLDKAVVCKHWLRGLCKKNEKCEFL 71
Query: 1939 HKVIPERMPDCSYFLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--S 1995
H+ ++MP+C +F + G C+N C + H+ N + C + +G+C G CR KH
Sbjct: 72 HEYNLKKMPECWFFSKYGECSNIECHFLHIDPNSESKECLWYKRGFCRHGLMCRNKHVKK 131
Query: 1996 YVCPTFKATGSCALGAKCRLHHPKS 2020
+C ++ G C G +C+L HPK+
Sbjct: 132 KLCYSY-FYGFCIEGPECKLGHPKA 155
>gi|256077604|ref|XP_002575092.1| hypothetical protein [Schistosoma mansoni]
gi|360045196|emb|CCD82744.1| hypothetical protein Smp_037380 [Schistosoma mansoni]
Length = 307
Score = 79.3 bits (194), Expect = 2e-11, Method: Composition-based stats.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 14/181 (7%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSN-SDCKLTHKVIPERMPDCSY 1951
C+FF +C +N CP H + VC +L+GLC DC+ H+ +MP+C +
Sbjct: 41 CRFFIT-NQCPLNN-LCPLRHIKADRTVVCKHWLRGLCKKGDDCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCA 2008
F + G C NK CP+ H+ C + +G+C +G CR +H C + G C
Sbjct: 99 FSKFGECMNKECPFLHIDPASKVQDCPWYDRGFCRNGPLCRNRHVRRVACKNY-INGFCP 157
Query: 2009 LGAKCRLHH------PKSRSNGKKSRRSRKPKNTHGRYFGSMLVEDSESQTAMSERPTVQ 2062
G +C+ H P S + +KSR N G L E + + E+ +Q
Sbjct: 158 KGRECKYAHPIWWPLPGSDQDTQKSRWICHYCNERGHKIQFCLKLSPEERLRLQEQQRMQ 217
Query: 2063 N 2063
N
Sbjct: 218 N 218
>gi|308476985|ref|XP_003100707.1| CRE-CPSF-4 protein [Caenorhabditis remanei]
gi|308264519|gb|EFP08472.1| CRE-CPSF-4 protein [Caenorhabditis remanei]
Length = 310
Score = 79.3 bits (194), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/114 (35%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
Query: 1910 CPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRH 1966
CP H D K VC +L+GLC D C+ H+ +MP+C +F + C+N+ CP+RH
Sbjct: 79 CPLRHIDGEKAVVCKHWLRGLCKKGDQCEFLHEYDLTKMPECFFFSKYSACSNRECPFRH 138
Query: 1967 VHVNPNASTCEGFLKGYCADGDECRKKHSY--VCPTFKATGSCALGAKCRLHHP 2018
+ C + +G+C G C+ +H VCP + A G C G C+ HP
Sbjct: 139 IDPETKMKDCPWYDRGFCRHGPYCKHRHRRRAVCPNYLA-GFCPQGPDCQYAHP 191
>gi|291411295|ref|XP_002721911.1| PREDICTED: cleavage and polyadenylation specific factor 4, 30kDa
isoform 2 [Oryctolagus cuniculus]
Length = 269
Score = 79.3 bits (194), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G CR +H+ +C + G C
Sbjct: 99 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGPSCKFMHPR 168
>gi|313226222|emb|CBY21365.1| unnamed protein product [Oikopleura dioica]
gi|313240347|emb|CBY32689.1| unnamed protein product [Oikopleura dioica]
gi|313245371|emb|CBY40122.1| unnamed protein product [Oikopleura dioica]
Length = 202
Score = 79.3 bits (194), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 1918 KIAVCTKFLKGLCSN-SDCKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRHVHVNPNAST 1975
K VC +L+GLC DC+ H+ +MP+C +F + G C N++C Y H+ N
Sbjct: 64 KHVVCKHWLRGLCKKGDDCEFLHEYDMAKMPECYFFSKFGRCENRDCQYLHIDPNSKVKE 123
Query: 1976 CEGFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHP 2018
C+ + +G+C G C+ +H +C + G C LG KC+ HP
Sbjct: 124 CQWYARGFCKHGPMCKSRHVRKVMCQNW-IVGFCPLGPKCKYAHP 167
Score = 44.7 bits (104), Expect = 0.54, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 48/114 (42%), Gaps = 38/114 (33%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C FF++FG+C +N C Y+H DP NS K +
Sbjct: 92 KMPECYFFSKFGRC--ENRDCQYLHIDP---------------NSKVK-----------E 123
Query: 1949 CSYFLQGLCTN-KNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTF 2001
C ++ +G C + C RHV C+ ++ G+C G +C+ H PTF
Sbjct: 124 CQWYARGFCKHGPMCKSRHVR----KVMCQNWIVGFCPLGPKCKYAH----PTF 169
>gi|432115228|gb|ELK36738.1| Cleavage and polyadenylation specificity factor subunit 4 [Myotis
davidii]
Length = 269
Score = 79.3 bits (194), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G CR +H+ +C + G C
Sbjct: 99 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGPSCKFMHPR 168
>gi|17137188|ref|NP_477156.1| clipper [Drosophila melanogaster]
gi|7296160|gb|AAF51453.1| clipper [Drosophila melanogaster]
gi|90855755|gb|ABE01239.1| IP02509p [Drosophila melanogaster]
gi|220952324|gb|ACL88705.1| Clp-PA [synthetic construct]
gi|220958742|gb|ACL91914.1| Clp-PA [synthetic construct]
Length = 296
Score = 79.3 bits (194), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGK-CNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCS 1950
C F TR G+ C+K + CP+ H + VC +L+GLC D C+ H+ +MP+C
Sbjct: 41 CNFITRNGQECDKGSA-CPFRHIRGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECY 99
Query: 1951 YFLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSC 2007
++ + C NK CP+ H+ C + +G+C G CR +H +C + A G C
Sbjct: 100 FYSRFNACHNKECPFLHIDPQSKVKDCPWYKRGFCRHGPHCRHQHLRRVLCMDYLA-GFC 158
Query: 2008 ALGAKCRLHHP 2018
G C+ HP
Sbjct: 159 PEGPSCKHMHP 169
Score = 43.5 bits (101), Expect = 1.2, Method: Composition-based stats.
Identities = 42/159 (26%), Positives = 65/159 (40%), Gaps = 45/159 (28%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DP-SKIAVCTKFLKGLCSNSDCKLTHKVIPERMP 1947
K C F++RF C+ N +CP++H DP SK+ C + +G C + P
Sbjct: 94 KMPECYFYSRFNACH--NKECPFLHIDPQSKVKDCPWYKRGFCRHG-------------P 138
Query: 1948 DCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSC 2007
C RH H+ C +L G+C +G C+ H P F+
Sbjct: 139 HC---------------RHQHL--RRVLCMDYLAGFCPEGPSCKHMH----PHFELPPLA 177
Query: 2008 ALGAKCRLHH--PKSRSNGKKSRRSRKPKNTHGRYFGSM 2044
LG K +LH P G+ ++ N+ +Y GS+
Sbjct: 178 ELG-KDQLHKKLPTCHYCGELGHKA----NSCKQYVGSL 211
>gi|146423357|ref|XP_001487608.1| hypothetical protein PGUG_00985 [Meyerozyma guilliermondii ATCC 6260]
Length = 199
Score = 79.3 bits (194), Expect = 2e-11, Method: Composition-based stats.
Identities = 53/153 (34%), Positives = 74/153 (48%), Gaps = 14/153 (9%)
Query: 1891 RKYCQFF--TRFGKCNKDNGKCPYIHDPSKIA---VCTKFLKGLCSNSD-CKLTHKVIPE 1944
R CQFF + G C N CP H P+ + VC +L+GLC +D C+ H+
Sbjct: 35 RPVCQFFLPSTPGSCPNGN-NCPNKHVPTMYSNKIVCKHWLRGLCKKNDHCEFLHEYNLR 93
Query: 1945 RMPDCSYFLQ-GLCTNK-NCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPT 2000
+MP+C ++ + G CT C Y HV C + KG+C +G +C +H +CP
Sbjct: 94 KMPECLFYSKNGFCTQTPECLYLHVDPQLKIPACPNYEKGFCPEGPKCPNRHVRKIMCPL 153
Query: 2001 FKATGSCALGAKCRLHHPKSRSNGKKSRRSRKP 2033
+ TG C GA+C HP R G R KP
Sbjct: 154 W-VTGFCPKGAECDYSHP--RFEGMIDRLRIKP 183
>gi|410931245|ref|XP_003979006.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Takifugu rubripes]
Length = 263
Score = 79.3 bits (194), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF R C K CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFMR-AACMK-GAMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G +CR +H+ +C + G C
Sbjct: 99 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPDCRHRHTRRVICVNY-LVGFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGRSCKFMHPR 168
>gi|68485589|ref|XP_713277.1| potential zinc RING finger protein [Candida albicans SC5314]
gi|68485696|ref|XP_713226.1| potential zinc RING finger protein [Candida albicans SC5314]
gi|46434707|gb|EAK94109.1| potential zinc RING finger protein [Candida albicans SC5314]
gi|46434759|gb|EAK94160.1| potential zinc RING finger protein [Candida albicans SC5314]
Length = 234
Score = 79.3 bits (194), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 57/115 (49%), Gaps = 7/115 (6%)
Query: 1910 CPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHV-- 1967
C Y HD KI +C +L G C + +C L+H P C YFL C N NC YRH
Sbjct: 8 CKYDHDKEKIRICPLYLLGKCYSKNCLLSHSPNDNNTPQCRYFLDKSCQNPNCKYRHFKP 67
Query: 1968 -HVN-PNAS--TCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
H N PN TC F + G+C+ G +C H CP F+ C +G +C L H
Sbjct: 68 AHYNDPNYEIWTCRPFAIGGFCSRGKKCSFLHLLNCPDFEEDNYCVMGRECPLTH 122
>gi|73957940|ref|XP_850149.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 4
isoform 2 [Canis lupus familiaris]
Length = 269
Score = 79.3 bits (194), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G CR +H+ +C + G C
Sbjct: 99 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGPSCKFMHPR 168
>gi|395852822|ref|XP_003798929.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 4
isoform 2 [Otolemur garnettii]
Length = 269
Score = 79.3 bits (194), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G CR +H+ +C + G C
Sbjct: 99 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGPSCKFMHPR 168
>gi|5729939|ref|NP_006684.1| cleavage and polyadenylation specificity factor subunit 4 isoform 1
[Homo sapiens]
gi|402862924|ref|XP_003895788.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 4
isoform 2 [Papio anubis]
gi|426357076|ref|XP_004045874.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 4
isoform 2 [Gorilla gorilla gorilla]
gi|37999487|sp|O95639.1|CPSF4_HUMAN RecName: Full=Cleavage and polyadenylation specificity factor subunit
4; AltName: Full=Cleavage and polyadenylation specificity
factor 30 kDa subunit; Short=CPSF 30 kDa subunit;
AltName: Full=NS1 effector domain-binding protein 1;
Short=Neb-1; AltName: Full=No arches homolog
gi|4098572|gb|AAD00321.1| no arches [Homo sapiens]
gi|49457318|emb|CAG46958.1| CPSF4 [Homo sapiens]
gi|51094626|gb|EAL23878.1| cleavage and polyadenylation specific factor 4, 30kDa [Homo sapiens]
gi|119597073|gb|EAW76667.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform CRA_f
[Homo sapiens]
gi|119597074|gb|EAW76668.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform CRA_f
[Homo sapiens]
gi|124302214|gb|ABN05292.1| cleavage and polyadenylation specific factor 4, 30kDa [Homo sapiens]
gi|261861580|dbj|BAI47312.1| cleavage and polyadenylation specific factor 4, 30kDa [synthetic
construct]
gi|355560471|gb|EHH17157.1| hypothetical protein EGK_13489 [Macaca mulatta]
gi|355747522|gb|EHH52019.1| hypothetical protein EGM_12382 [Macaca fascicularis]
gi|380809012|gb|AFE76381.1| cleavage and polyadenylation specificity factor subunit 4 isoform 1
[Macaca mulatta]
gi|383413433|gb|AFH29930.1| cleavage and polyadenylation specificity factor subunit 4 isoform 1
[Macaca mulatta]
gi|384940110|gb|AFI33660.1| cleavage and polyadenylation specificity factor subunit 4 isoform 1
[Macaca mulatta]
Length = 269
Score = 79.3 bits (194), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G CR +H+ +C + G C
Sbjct: 99 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGPSCKFMHPR 168
>gi|332867114|ref|XP_519234.3| PREDICTED: cleavage and polyadenylation specificity factor subunit 4
isoform 7 [Pan troglodytes]
gi|397489494|ref|XP_003815761.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 4
isoform 2 [Pan paniscus]
gi|410214168|gb|JAA04303.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
gi|410249442|gb|JAA12688.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
gi|410289414|gb|JAA23307.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
gi|410353009|gb|JAA43108.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
Length = 269
Score = 79.0 bits (193), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G CR +H+ +C + G C
Sbjct: 99 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGPSCKFMHPR 168
>gi|238879791|gb|EEQ43429.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 234
Score = 79.0 bits (193), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 57/115 (49%), Gaps = 7/115 (6%)
Query: 1910 CPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHV-- 1967
C Y HD KI +C +L G C + +C L+H P C YFL C N NC YRH
Sbjct: 8 CKYDHDKEKIRICPLYLLGKCYSKNCLLSHSSNDNNTPQCRYFLDKSCQNPNCKYRHFKP 67
Query: 1968 -HVN-PNAS--TCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
H N PN TC F + G+C+ G +C H CP F+ C +G +C L H
Sbjct: 68 AHYNDPNYEIWTCRPFAIGGFCSRGKKCPFLHLLNCPDFEEDNYCVMGRECPLTH 122
>gi|332373586|gb|AEE61934.1| unknown [Dendroctonus ponderosae]
Length = 294
Score = 79.0 bits (193), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 7/131 (5%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
CQF+ C K CP+ H + VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CQFYGTQQGCVK-GINCPFRHIRGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 99
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCA 2008
+ + C NK CP+ H+ C + +G+C G CR +H +C + A G C
Sbjct: 100 YSRFNACHNKECPFLHIDPESKIKDCPWYDRGFCRHGPHCRHRHVRRVLCTNYLA-GFCP 158
Query: 2009 LGAKCRLHHPK 2019
G+KC+ HP+
Sbjct: 159 DGSKCKYMHPR 169
Score = 47.8 bits (112), Expect = 0.072, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F++RF C+ N +CP++H DP ++ D
Sbjct: 93 KMPECYFYSRFNACH--NKECPFLHIDPE--------------------------SKIKD 124
Query: 1949 CSYFLQGLCTN-KNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + +C +RHV C +L G+C DG +C+ H
Sbjct: 125 CPWYDRGFCRHGPHCRHRHVR----RVLCTNYLAGFCPDGSKCKYMH 167
>gi|71986234|ref|NP_001023126.1| Protein CPSF-4 [Caenorhabditis elegans]
gi|33589141|emb|CAE45045.1| Protein CPSF-4 [Caenorhabditis elegans]
Length = 302
Score = 79.0 bits (193), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/114 (35%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
Query: 1910 CPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRH 1966
CP H D K VC +L+GLC D C+ H+ +MP+C +F + C+N+ CP+RH
Sbjct: 69 CPLRHIDGEKAVVCKHWLRGLCKKGDQCEFLHEYDLTKMPECFFFSKYSACSNRECPFRH 128
Query: 1967 VHVNPNASTCEGFLKGYCADGDECRKKHSY--VCPTFKATGSCALGAKCRLHHP 2018
+ C + +G+C G C+ +H VCP + A G C G C+ HP
Sbjct: 129 IDPETKMKDCPWYDRGFCRHGPYCKHRHRRRAVCPNYLA-GFCLQGPDCQYAHP 181
>gi|149755350|ref|XP_001494963.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Equus caballus]
gi|301777646|ref|XP_002924237.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Ailuropoda melanoleuca]
gi|348568558|ref|XP_003470065.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Cavia porcellus]
gi|410984387|ref|XP_003998510.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 4
isoform 1 [Felis catus]
gi|431908022|gb|ELK11629.1| Cleavage and polyadenylation specificity factor subunit 4 [Pteropus
alecto]
Length = 269
Score = 79.0 bits (193), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G CR +H+ +C + G C
Sbjct: 99 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 EGPSCKFMHPR 168
>gi|341884151|gb|EGT40086.1| hypothetical protein CAEBREN_24449 [Caenorhabditis brenneri]
gi|341893362|gb|EGT49297.1| hypothetical protein CAEBREN_21927 [Caenorhabditis brenneri]
Length = 312
Score = 79.0 bits (193), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/114 (35%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
Query: 1910 CPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRH 1966
CP H D K VC +L+GLC D C+ H+ +MP+C +F + C+N+ CP+RH
Sbjct: 79 CPLRHIDGEKAVVCKHWLRGLCKKGDQCEFLHEYDLTKMPECFFFSKYSACSNRECPFRH 138
Query: 1967 VHVNPNASTCEGFLKGYCADGDECRKKHSY--VCPTFKATGSCALGAKCRLHHP 2018
+ C + +G+C G C+ +H VCP + A G C G +C+ HP
Sbjct: 139 IDPETKMKDCPWYDRGFCRHGPYCKHRHRRRAVCPNYLA-GFCPQGRECQHAHP 191
>gi|148702475|gb|EDL34422.1| DNA segment, Chr 11, ERATO Doi 636, expressed, isoform CRA_d [Mus
musculus]
Length = 227
Score = 79.0 bits (193), Expect = 3e-11, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 72/147 (48%), Gaps = 8/147 (5%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDP-SKIAVCTKFLKGLCSNSDC-KLTHKVIPERMPDCSY 1951
C FF + G C K CP H+ K+ VC +L+GLC SDC H+ +MP C +
Sbjct: 41 CNFFAK-GLCVK-GMLCPLRHEQGEKLVVCKHWLRGLCRKSDCCDFLHQYDVSKMPVCYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSY--VCPTFKATGSCA 2008
+ G C+NK C + H+ C + +G+C +G C+ +H + +CP + TG C
Sbjct: 99 HSKFGNCSNKECLFLHLKPVLKLQDCPWYNQGFCKEGPLCKYRHVHQVLCPNY-FTGFCP 157
Query: 2009 LGAKCRLHHPKSRSNGKKSRRSRKPKN 2035
G +C+ HPK S +P N
Sbjct: 158 EGPQCQFGHPKMSPPFHPSNVKLQPVN 184
Score = 49.7 bits (117), Expect = 0.021, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 42/113 (37%), Gaps = 32/113 (28%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDC 1949
K C F ++FG CSN +C H ++ DC
Sbjct: 92 KMPVCYFHSKFGN---------------------------CSNKECLFLHLKPVLKLQDC 124
Query: 1950 SYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTF 2001
++ QG C C YRHVH C + G+C +G +C+ H + P F
Sbjct: 125 PWYNQGFCKEGPLCKYRHVH----QVLCPNYFTGFCPEGPQCQFGHPKMSPPF 173
>gi|301781634|ref|XP_002926233.1| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein-like [Ailuropoda melanoleuca]
Length = 166
Score = 79.0 bits (193), Expect = 3e-11, Method: Composition-based stats.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 10/128 (7%)
Query: 1894 CQFFTRFGKCNKDNGK-CPYIHDP-SKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCS 1950
C FF + G C K GK CP+ H+ K+ VC +L+GLC D C H+ RMP+C
Sbjct: 41 CNFFAK-GLCEK--GKLCPFRHNQGEKMVVCKHWLRGLCKKGDQCSFLHQYDVTRMPECY 97
Query: 1951 YFLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSY--VCPTFKATGSC 2007
+ + G C NK C + HV N C + +G+C DG C+ +H + +C + G C
Sbjct: 98 FHSKFGDCNNKECSFLHVKPAFNTRDCPWYDQGFCKDGPLCKHRHVHKTMCVNY-LVGFC 156
Query: 2008 ALGAKCRL 2015
G C+
Sbjct: 157 PKGPHCQF 164
>gi|71648901|ref|XP_813230.1| cleavage and polyadenylation specificity factor 30 kDa subunit
[Trypanosoma cruzi strain CL Brener]
gi|70878095|gb|EAN91379.1| cleavage and polyadenylation specificity factor 30 kDa subunit,
putative [Trypanosoma cruzi]
Length = 271
Score = 78.6 bits (192), Expect = 3e-11, Method: Composition-based stats.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 12/152 (7%)
Query: 1889 RKRKYCQFFTRFGKCNKDNGKCPYIHDPS-----KIAVCTKFLKGLCSNSD-CKLTHKVI 1942
++R+ CQ F + GKC + CP H S ++ VC +L+G C N + C H+
Sbjct: 26 KRREICQPF-QHGKC-RHGTACPERHVISQFKTMRLEVCKHWLRGACVNGENCLYLHEYD 83
Query: 1943 PERMPDCSYFLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSY--VCP 1999
+P C+++ + G CTN CP++HV C + +G+C G +C +H + CP
Sbjct: 84 DRYVPLCAFYQRLGECTNPECPFQHVIQVEKKPECAAYRRGFCPLGPKCHLRHVFRPSCP 143
Query: 2000 TFKATGSCALGAKCRLHHPKSRSNGKKSRRSR 2031
+ A G C LG KC + HP + S R
Sbjct: 144 FYMA-GFCPLGPKCTMGHPVQELYNRNSVSER 174
>gi|256985196|ref|NP_001158004.1| cleavage and polyadenylation specific factor 4-like isoform 3 [Mus
musculus]
Length = 280
Score = 78.6 bits (192), Expect = 4e-11, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 72/147 (48%), Gaps = 8/147 (5%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDP-SKIAVCTKFLKGLCSNSDC-KLTHKVIPERMPDCSY 1951
C FF + G C K CP H+ K+ VC +L+GLC SDC H+ +MP C +
Sbjct: 94 CNFFAK-GLCVK-GMLCPLRHEQGEKLVVCKHWLRGLCRKSDCCDFLHQYDVSKMPVCYF 151
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSY--VCPTFKATGSCA 2008
+ G C+NK C + H+ C + +G+C +G C+ +H + +CP + TG C
Sbjct: 152 HSKFGNCSNKECLFLHLKPVLKLQDCPWYNQGFCKEGPLCKYRHVHQVLCPNY-FTGFCP 210
Query: 2009 LGAKCRLHHPKSRSNGKKSRRSRKPKN 2035
G +C+ HPK S +P N
Sbjct: 211 EGPQCQFGHPKMSPPFHPSNVKLQPVN 237
Score = 49.3 bits (116), Expect = 0.022, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 42/113 (37%), Gaps = 32/113 (28%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDC 1949
K C F ++FG CSN +C H ++ DC
Sbjct: 145 KMPVCYFHSKFGN---------------------------CSNKECLFLHLKPVLKLQDC 177
Query: 1950 SYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTF 2001
++ QG C C YRHVH C + G+C +G +C+ H + P F
Sbjct: 178 PWYNQGFCKEGPLCKYRHVH----QVLCPNYFTGFCPEGPQCQFGHPKMSPPF 226
>gi|198430431|ref|XP_002129809.1| PREDICTED: similar to Cleavage and polyadenylation specificity factor
subunit 4 (Cleavage and polyadenylation specificity
factor 30 kDa subunit) (CPSF 30 kDa subunit) (NS1
effector domain-binding protein 1) (Neb-1) (No arches
homolog) [Ciona intestinalis]
Length = 286
Score = 78.6 bits (192), Expect = 4e-11, Method: Composition-based stats.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHD-PSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C FF + C + CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CHFF-KLSICQR-GANCPFRHVLGDKAIVCKHWLRGLCKKGDQCEFLHEYDMSKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCA 2008
+ + G C NK+C Y+H+ C + +G+C G C+ +H +C + G C
Sbjct: 99 YARFGRCDNKDCQYQHIDPASKIKDCPWYDRGFCKHGATCKHRHRRKIMCMNY-LVGFCP 157
Query: 2009 LGAKCRLHHP 2018
G KC+ HP
Sbjct: 158 EGGKCKFVHP 167
Score = 47.8 bits (112), Expect = 0.073, Method: Composition-based stats.
Identities = 45/190 (23%), Positives = 73/190 (38%), Gaps = 48/190 (25%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F+ RFG+C DN C Y H DP+ ++ D
Sbjct: 92 KMPECYFYARFGRC--DNKDCQYQHIDPA--------------------------SKIKD 123
Query: 1949 CSYFLQGLCTN-KNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSC 2007
C ++ +G C + C +RH C +L G+C +G +C+ +V P ++ S
Sbjct: 124 CPWYDRGFCKHGATCKHRH----RRKIMCMNYLVGFCPEGGKCK----FVHPLWELPVSE 175
Query: 2008 ALGAKCRLHHPKSRSNGKKSRRSRKPKNTHGRYFGSMLVEDSESQTAMSERPTVQNNGNL 2067
G +C + + R+ K+ +G LV Q+ + +P V+
Sbjct: 176 QKGTRCHICNEYGH-KANHCHRNLATKSENGGEMNGGLVLSFNKQSPSAMQPNVK----- 229
Query: 2068 FVEGKLVDYI 2077
KLVD I
Sbjct: 230 ----KLVDEI 235
>gi|452989469|gb|EME89224.1| hypothetical protein MYCFIDRAFT_23661, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 116
Score = 78.6 bits (192), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/104 (38%), Positives = 58/104 (55%), Gaps = 4/104 (3%)
Query: 1918 KIAVCTKFLKGLC-SNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTC 1976
K+A+C FL C + +C L+H+ ER+P C++FL+G CT C Y HV+V+ +A C
Sbjct: 2 KVAICKDFLYKSCPAGVNCDLSHEPSYERVPACTHFLRGNCTKTACLYPHVNVSFDAPVC 61
Query: 1977 EGFLK-GYCADGDECRKKHSYVCPTFKATGSCA--LGAKCRLHH 2017
F G+C+ G C +H + CP + G CA KC L H
Sbjct: 62 RPFATLGFCSKGVSCGDRHVFECPDYANAGHCANIKKGKCPLPH 105
>gi|71404274|ref|XP_804858.1| cleavage and polyadenylation specificity factor 30 kDa subunit
[Trypanosoma cruzi strain CL Brener]
gi|50363267|gb|AAT75336.1| cleavage polyadenylation specificity factor CPSF30 [Trypanosoma
cruzi]
gi|70868032|gb|EAN83007.1| cleavage and polyadenylation specificity factor 30 kDa subunit,
putative [Trypanosoma cruzi]
Length = 271
Score = 78.6 bits (192), Expect = 4e-11, Method: Composition-based stats.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 12/152 (7%)
Query: 1889 RKRKYCQFFTRFGKCNKDNGKCPYIHDPS-----KIAVCTKFLKGLCSNSD-CKLTHKVI 1942
++R+ CQ F + GKC + CP H S ++ VC +L+G C N + C H+
Sbjct: 26 KRREICQPF-QHGKC-RHGTACPERHVISQFKTMRLEVCKHWLRGACVNGENCLYLHEYD 83
Query: 1943 PERMPDCSYFLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSY--VCP 1999
+P C+++ + G CTN CP++HV C + +G+C G +C +H + CP
Sbjct: 84 DRYVPLCAFYQRLGECTNPECPFQHVIQVEKQPECAAYRRGFCPLGPKCHLRHVFRPSCP 143
Query: 2000 TFKATGSCALGAKCRLHHPKSRSNGKKSRRSR 2031
+ A G C LG KC + HP + S R
Sbjct: 144 FYMA-GFCPLGPKCTMGHPVQELYNRNSVSER 174
>gi|332867116|ref|XP_001137528.2| PREDICTED: cleavage and polyadenylation specificity factor subunit 4
isoform 4 [Pan troglodytes]
gi|397489496|ref|XP_003815762.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 4
isoform 3 [Pan paniscus]
Length = 191
Score = 78.6 bits (192), Expect = 4e-11, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 6/115 (5%)
Query: 1910 CPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRH 1966
CP+ H K VC +L+GLC D C+ H+ +MP+C ++ + G C+NK CP+ H
Sbjct: 2 CPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLH 61
Query: 1967 VHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCALGAKCRLHHPK 2019
+ C + +G+C G CR +H+ +C + G C G C+ HP+
Sbjct: 62 IDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCPEGPSCKFMHPR 115
Score = 42.7 bits (99), Expect = 2.1, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F+++FG+C+ N +CP++H DP ++ D
Sbjct: 39 KMPECYFYSKFGECS--NKECPFLHIDPE--------------------------SKIKD 70
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + C +RH C +L G+C +G C+ H
Sbjct: 71 CPWYDRGFCKHGPLCRHRHTR----RVICVNYLVGFCPEGPSCKFMH 113
>gi|426357078|ref|XP_004045875.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 4
isoform 3 [Gorilla gorilla gorilla]
gi|221043738|dbj|BAH13546.1| unnamed protein product [Homo sapiens]
Length = 191
Score = 78.2 bits (191), Expect = 4e-11, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 6/115 (5%)
Query: 1910 CPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRH 1966
CP+ H K VC +L+GLC D C+ H+ +MP+C ++ + G C+NK CP+ H
Sbjct: 2 CPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLH 61
Query: 1967 VHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCALGAKCRLHHPK 2019
+ C + +G+C G CR +H+ +C + G C G C+ HP+
Sbjct: 62 IDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCPEGPSCKFMHPR 115
Score = 42.7 bits (99), Expect = 2.2, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F+++FG+C+ N +CP++H DP ++ D
Sbjct: 39 KMPECYFYSKFGECS--NKECPFLHIDPE--------------------------SKIKD 70
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + C +RH C +L G+C +G C+ H
Sbjct: 71 CPWYDRGFCKHGPLCRHRHTR----RVICVNYLVGFCPEGPSCKFMH 113
>gi|407846109|gb|EKG02435.1| cleavage and polyadenylation specificity factor 30 kDa subunit,
putative [Trypanosoma cruzi]
Length = 271
Score = 78.2 bits (191), Expect = 5e-11, Method: Composition-based stats.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 12/152 (7%)
Query: 1889 RKRKYCQFFTRFGKCNKDNGKCPYIHDPS-----KIAVCTKFLKGLCSNSD-CKLTHKVI 1942
++R+ CQ F + GKC + CP H S ++ VC +L+G C N + C H+
Sbjct: 26 KRREICQPF-QHGKC-RHGTACPERHVISQFKTMRLEVCKHWLRGACVNGENCLYLHEYD 83
Query: 1943 PERMPDCSYFLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSY--VCP 1999
+P C+++ + G CTN CP++HV C + +G+C G +C +H + CP
Sbjct: 84 DRYVPLCAFYQRLGECTNPECPFQHVIQVEKRPECAAYRRGFCPLGPKCHLRHVFRPSCP 143
Query: 2000 TFKATGSCALGAKCRLHHPKSRSNGKKSRRSR 2031
+ A G C LG KC + HP + S R
Sbjct: 144 FYMA-GFCPLGPKCTMGHPVQELYNRNSVSER 174
>gi|169805996|ref|XP_001827743.1| cleavage and polyadenylation specificity factor, 30 kDa subunit
[Enterocytozoon bieneusi H348]
gi|161779029|gb|EDQ31055.1| cleavage and polyadenylation specificity factor, 30 kDa subunit
[Enterocytozoon bieneusi H348]
Length = 181
Score = 78.2 bits (191), Expect = 5e-11, Method: Composition-based stats.
Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 10/130 (7%)
Query: 1893 YCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCS-NSDCKLTHKVIPERMPDCS 1950
YC F + G+C G C +H + VC +L+GLC N C H+ I ++MP+C
Sbjct: 36 YCPNF-QIGQCR---GNCNLLHIKLASAVVCKHWLRGLCKKNEKCDYLHEYILKKMPECF 91
Query: 1951 YF-LQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSC 2007
+F + G+C N C + HV + C + +G+C +G +C+ KH +C + G C
Sbjct: 92 FFNVYGVCNNNECMFLHVKPDSKVRECVWYTRGFCRNGAQCKNKHIRKNLCWDY-FNGFC 150
Query: 2008 ALGAKCRLHH 2017
G +C+L H
Sbjct: 151 PKGPECKLGH 160
>gi|50550735|ref|XP_502840.1| YALI0D14982p [Yarrowia lipolytica]
gi|74634534|sp|Q6C922.1|YTH1_YARLI RecName: Full=mRNA 3'-end-processing protein YTH1
gi|49648708|emb|CAG81028.1| YALI0D14982p [Yarrowia lipolytica CLIB122]
Length = 193
Score = 78.2 bits (191), Expect = 5e-11, Method: Composition-based stats.
Identities = 45/136 (33%), Positives = 67/136 (49%), Gaps = 8/136 (5%)
Query: 1891 RKYCQFFTRFGKCNKDNGKCPYIH-DPSKI--AVCTKFLKGLCSNS-DCKLTHKVIPERM 1946
R C+ F +F C + N CP H P+ + VC +L+GLC +C+ H+ ++M
Sbjct: 27 RPLCRGFLQFDGCPRGN-SCPDKHLAPTFLNKIVCKHWLRGLCKKGLNCEFLHEYNLQKM 85
Query: 1947 PDCSYFLQ-GLCTNK-NCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCP-TFKA 2003
P+C ++++ G CT +C Y H+ C + KG+C G EC +KH P
Sbjct: 86 PECQFYVKNGFCTQSPDCQYLHIDPASKIPVCFNYEKGFCKMGPECSRKHIRRMPCELYM 145
Query: 2004 TGSCALGAKCRLHHPK 2019
TG C G C HPK
Sbjct: 146 TGFCPKGRVCEFAHPK 161
>gi|387593218|gb|EIJ88242.1| zinc finger protein [Nematocida parisii ERTm3]
gi|387596070|gb|EIJ93692.1| zinc finger protein [Nematocida parisii ERTm1]
Length = 159
Score = 78.2 bits (191), Expect = 5e-11, Method: Composition-based stats.
Identities = 37/103 (35%), Positives = 58/103 (56%), Gaps = 5/103 (4%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRHVHVNPNASTCEG 1978
VC +L+GLC D C+ H ++MP+C +F + G C+N++C + H+ N + C
Sbjct: 31 VCKHWLRGLCKKGDVCEFLHVYALDKMPECWFFSKYGECSNQDCLFLHIDPNSKSKECIW 90
Query: 1979 FLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPK 2019
+ +G+C G+ CR KH +C ++A G C LG C HPK
Sbjct: 91 YNRGFCRHGNSCRNKHYKKRMCFNYEA-GFCPLGKGCPYGHPK 132
Score = 42.0 bits (97), Expect = 4.4, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 10/81 (12%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DP-SKIAVCTKFLKGLCSNSD-CKLTHKVIPERM 1946
K C FF+++G+C+ N C ++H DP SK C + +G C + + C+ H +RM
Sbjct: 56 KMPECWFFSKYGECS--NQDCLFLHIDPNSKSKECIWYNRGFCRHGNSCRNKH--YKKRM 111
Query: 1947 PDCSYFLQGLCT-NKNCPYRH 1966
C + G C K CPY H
Sbjct: 112 --CFNYEAGFCPLGKGCPYGH 130
>gi|5931741|emb|CAB56623.1| zinc finger protein [Rattus norvegicus]
Length = 229
Score = 77.8 bits (190), Expect = 6e-11, Method: Composition-based stats.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 7/130 (5%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 40 CEFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 97
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGD-ECRKKHSYVCPTFKATGSCAL 2009
+ + G C+NK CP+ H+ C + +G+C G + R +C + G C
Sbjct: 98 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLQHRHTRRVICVNY-LVGFCPE 156
Query: 2010 GAKCRLHHPK 2019
G C+ HP+
Sbjct: 157 GTSCKFMHPR 166
Score = 45.4 bits (106), Expect = 0.37, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 33/106 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F+++FG+C+ N +CP++H DP ++ D
Sbjct: 91 KMPECYFYSKFGECS--NKECPFLHIDPE--------------------------SKIKD 122
Query: 1949 CSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C K+ P +H H C +L G+C +G C+ H
Sbjct: 123 CPWYDRGFC--KHGPLQHRHT--RRVICVNYLVGFCPEGTSCKFMH 164
>gi|307105418|gb|EFN53667.1| hypothetical protein CHLNCDRAFT_14092, partial [Chlorella variabilis]
Length = 78
Score = 77.8 bits (190), Expect = 6e-11, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 1918 KIAVCTKFLKGLCS-NSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTC 1976
K AVC +L G C+ + C L H+ E MP C++FLQG CT CPY HV++ A C
Sbjct: 1 KRAVCPHWLHGRCTAGALCTLQHQRKAELMPICTHFLQGRCTAAACPYLHVNLPAGAPVC 60
Query: 1977 EGFLKGYCADGDECRKKH 1994
+ FL+GYC G C KH
Sbjct: 61 KRFLRGYCPAGAACPHKH 78
>gi|89266751|emb|CAJ83570.1| novel protein similar to cpsf4 [Xenopus (Silurana) tropicalis]
Length = 279
Score = 77.8 bits (190), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/141 (30%), Positives = 67/141 (47%), Gaps = 18/141 (12%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFLK-SACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCA----------DGDECRKKHS--YVC 1998
+ + G C+NK CP+ H+ C + +G+C G CR +H+ +C
Sbjct: 99 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHVALNLYYVFSGPLCRHRHTRRVIC 158
Query: 1999 PTFKATGSCALGAKCRLHHPK 2019
+ G C G C+ HP+
Sbjct: 159 VNY-LVGFCIEGPNCKFMHPR 178
Score = 45.8 bits (107), Expect = 0.29, Method: Composition-based stats.
Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 24/107 (22%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DP-SKIAVCTKFLKGLCSNSDCKLTHKVIPERMP 1947
K C F+++FG+C+ N +CP++H DP SKI C + +G C + L +
Sbjct: 92 KMPECYFYSKFGECS--NKECPFLHIDPESKIKDCPWYDRGFCKHVALNLYY-------- 141
Query: 1948 DCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
F LC RH H C +L G+C +G C+ H
Sbjct: 142 ---VFSGPLC-------RHRHT--RRVICVNYLVGFCIEGPNCKFMH 176
>gi|402465457|gb|EJW01267.1| hypothetical protein EDEG_00528 [Edhazardia aedis USNM 41457]
Length = 176
Score = 77.8 bits (190), Expect = 6e-11, Method: Composition-based stats.
Identities = 46/133 (34%), Positives = 69/133 (51%), Gaps = 12/133 (9%)
Query: 1893 YCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNS-DCKLTHKVIPERMPDCS 1950
YC + + +C N CP IH K VC +L+GLC +C+ H+ +RMP+C
Sbjct: 26 YCPLYQQ-NRCY--NKSCPLIHIKLDKAVVCKHWLRGLCKKGRECEFLHEYDLKRMPECW 82
Query: 1951 YFLQ-GLCTNKNCPYRHVHVNPN-ASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGS 2006
+F + G C N C + +HV+PN A C + +G+C +G+ CR KH +C + G
Sbjct: 83 FFSKYGECANNECYF--LHVDPNKAKECAWYKRGFCRNGNYCRNKHVKGKMCAHY-FYGF 139
Query: 2007 CALGAKCRLHHPK 2019
C G C +H K
Sbjct: 140 CKDGPDCVYNHAK 152
>gi|254565579|ref|XP_002489900.1| Essential RNA-binding component of cleavage and polyadenylation
factor, contains five zinc fingers [Komagataella pastoris
GS115]
gi|238029696|emb|CAY67619.1| Essential RNA-binding component of cleavage and polyadenylation
factor, contains five zinc fingers [Komagataella pastoris
GS115]
gi|328350311|emb|CCA36711.1| mRNA 3'-end-processing protein YTH1 [Komagataella pastoris CBS 7435]
Length = 260
Score = 77.8 bits (190), Expect = 6e-11, Method: Composition-based stats.
Identities = 48/146 (32%), Positives = 70/146 (47%), Gaps = 8/146 (5%)
Query: 1885 LRLARKRKYCQFFTRFGKC-NKDNGKCPYIHDP-SKIAVCTKFLKGLCSN-SDCKLTHKV 1941
L L R C F+ G+C N N + ++ S VC +L+GLC DC+ H+
Sbjct: 39 LGLNPDRPVCNFWITSGECPNGTNCENKHVSKMFSNKIVCKHWLRGLCKKGDDCEFLHEY 98
Query: 1942 IPERMPDCSYFLQ-GLCTNK-NCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYV 1997
++P+C +F + G CT C Y H+ S C + +G+C DG +C ++H
Sbjct: 99 NFRKLPECVFFSKNGFCTQTPECLYLHIDPQTKVSNCPNYEQGFCPDGPKCSRRHIRKVA 158
Query: 1998 CPTFKATGSCALGAKCRLHHPKSRSN 2023
C + TG C LG C L HPK N
Sbjct: 159 CQNY-MTGFCPLGKNCELAHPKYDPN 183
>gi|393912029|gb|EJD76558.1| hypothetical protein LOAG_16507 [Loa loa]
Length = 292
Score = 77.8 bits (190), Expect = 7e-11, Method: Composition-based stats.
Identities = 39/114 (34%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
Query: 1910 CPYIHD-PSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQGL-CTNKNCPYRH 1966
CP H K VC +L+GLC D C+ H+ +MP+C +F + + C+N+ CP+RH
Sbjct: 76 CPLRHIVGDKAVVCKHWLRGLCKKGDQCEFLHEYDLSKMPECFFFSKYMACSNRECPFRH 135
Query: 1967 VHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHP 2018
+ C + +G+C G C+ +H +CP F A G C G C+ HP
Sbjct: 136 IDPESKIKDCPWYDRGFCRHGPFCKHRHRRRVLCPNFLA-GFCMDGRDCKYAHP 188
Score = 44.3 bits (103), Expect = 0.91, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DP-SKIAVCTKFLKGLCSNSD-CKLTHKVIPERM 1946
K C FF+++ C+ N +CP+ H DP SKI C + +G C + CK H+ R
Sbjct: 113 KMPECFFFSKYMACS--NRECPFRHIDPESKIKDCPWYDRGFCRHGPFCKHRHR----RR 166
Query: 1947 PDCSYFLQGLCTN-KNCPYRHVHVN 1970
C FL G C + ++C Y H N
Sbjct: 167 VLCPNFLAGFCMDGRDCKYAHPSFN 191
>gi|395738149|ref|XP_003780757.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 4 [Pongo abelii]
Length = 171
Score = 77.8 bits (190), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 6/115 (5%)
Query: 1910 CPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRH 1966
CP+ H K VC +L+GLC D C+ H+ +MP+C ++ + G C+NK CP+ H
Sbjct: 2 CPFRHISGEKTVVCXHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLH 61
Query: 1967 VHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCALGAKCRLHHPK 2019
+ C + +G+C G CR +H+ +C + G C G C+ HP+
Sbjct: 62 IDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCPEGPSCKFMHPR 115
Score = 42.4 bits (98), Expect = 3.0, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F+++FG+C+ N +CP++H DP ++ D
Sbjct: 39 KMPECYFYSKFGECS--NKECPFLHIDPE--------------------------SKIKD 70
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + C +RH C +L G+C +G C+ H
Sbjct: 71 CPWYDRGFCKHGPLCRHRHTR----RVICVNYLVGFCPEGPSCKFMH 113
>gi|193624968|ref|XP_001945316.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Acyrthosiphon pisum]
Length = 280
Score = 77.8 bits (190), Expect = 7e-11, Method: Composition-based stats.
Identities = 40/131 (30%), Positives = 64/131 (48%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C F+ + G C+K CP H + VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CSFYPK-GSCSK-GALCPMRHVRGDRTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCA 2008
+ + C NK CP+ H+ C + +G+C G C+ KH +C + +G C
Sbjct: 99 YARFNACHNKECPFLHIDPESKLKDCPWYDRGFCRHGPHCKHKHVRRVLCMNY-VSGFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 DGPNCKFVHPR 168
Score = 44.7 bits (104), Expect = 0.54, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 38/115 (33%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F+ RF C+ N +CP++H DP ++ D
Sbjct: 92 KMPECYFYARFNACH--NKECPFLHIDPE--------------------------SKLKD 123
Query: 1949 CSYFLQGLCTN-KNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFK 2002
C ++ +G C + +C ++HV C ++ G+C DG C+ +V P F+
Sbjct: 124 CPWYDRGFCRHGPHCKHKHVR----RVLCMNYVSGFCPDGPNCK----FVHPRFE 170
>gi|340378269|ref|XP_003387650.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Amphimedon queenslandica]
Length = 277
Score = 77.8 bits (190), Expect = 7e-11, Method: Composition-based stats.
Identities = 46/144 (31%), Positives = 72/144 (50%), Gaps = 9/144 (6%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMP 1947
K C+FF + G C++ CPY H ++ VC +L+ LC+ D C+ H+ RMP
Sbjct: 38 KAPLCEFFLQ-GTCSR-GFNCPYRHIKGDRVIVCKHWLRQLCNKGDECEFLHEYDMGRMP 95
Query: 1948 DCSYFLQ-GLCTNKNCPYRHVHVNP-NASTCEGFLKGYCADGDECRKKHS--YVCPTFKA 2003
C +F + G C NK+C + HV + C + +G+C G CR +H+ +C +
Sbjct: 96 VCYFFQKFGECNNKDCQFMHVDADTLKVKDCPWYDRGFCKHGPSCRNRHTRRVMCQKY-L 154
Query: 2004 TGSCALGAKCRLHHPKSRSNGKKS 2027
G C G C+ HP+ G K+
Sbjct: 155 FGFCPEGISCKHVHPRYELPGTKT 178
>gi|429961729|gb|ELA41274.1| hypothetical protein VICG_01647 [Vittaforma corneae ATCC 50505]
Length = 176
Score = 77.4 bits (189), Expect = 8e-11, Method: Composition-based stats.
Identities = 43/132 (32%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 1893 YCQFFTRFGKCNKDNGKCPYIHDPSKIAV-CTKFLKGLCS-NSDCKLTHKVIPERMPDCS 1950
YC + + G+C + C IH AV C +L+GLC N C+ H+ ++MP+C
Sbjct: 27 YCPAYQK-GQCRDRH--CRLIHIKLATAVVCKHWLRGLCKKNEKCEFLHEYNLKKMPECF 83
Query: 1951 YF-LQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSC 2007
+F + G+C N +C + H+ + A C + +G+C +G C+ KH + +C + A G C
Sbjct: 84 FFNVYGVCNNSDCIFLHLRPDSAARECIWYKRGFCKNGASCKNKHNRAMMCWDYYA-GFC 142
Query: 2008 ALGAKCRLHHPK 2019
G C+ HPK
Sbjct: 143 KNGPFCKFAHPK 154
>gi|345305259|ref|XP_001512096.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Ornithorhynchus anatinus]
Length = 243
Score = 77.4 bits (189), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 16 CEFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 73
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G CR +H+ +C + G C
Sbjct: 74 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCP 132
Query: 2009 LGAKCRLHHPK 2019
G C+ HP+
Sbjct: 133 EGPSCKFMHPR 143
>gi|327288274|ref|XP_003228853.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Anolis carolinensis]
Length = 278
Score = 77.0 bits (188), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 17/140 (12%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CDFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCAD---------GDECRKKHS--YVCP 1999
+ + G C+NK CP+ H+ C + +G+C G CR +H+ +C
Sbjct: 99 YSKYGECSNKECPFLHIDPESKIKDCPWYDRGFCKHVFLAIVYLAGPLCRHRHTRRVICV 158
Query: 2000 TFKATGSCALGAKCRLHHPK 2019
+ G C G C+ HP+
Sbjct: 159 NY-LVGFCPEGPACKFMHPR 177
Score = 43.9 bits (102), Expect = 1.1, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 25/107 (23%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DP-SKIAVCTKFLKGLCSNSDCKLTHKVIPERMP 1947
K C F++++G+C+ N +CP++H DP SKI C + +G C + + + P
Sbjct: 92 KMPECYFYSKYGECS--NKECPFLHIDPESKIKDCPWYDRGFCKHVFLAIVYLAGP---- 145
Query: 1948 DCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
LC RH H C +L G+C +G C+ H
Sbjct: 146 --------LC-------RHRHT--RRVICVNYLVGFCPEGPACKFMH 175
>gi|847869|gb|AAA67954.1| zinc finger protein [Drosophila melanogaster]
Length = 296
Score = 77.0 bits (188), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGK-CNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCS 1950
C F TR G+ C+K + CP+ H + VC +L+GLC D C+ H+ +MP+C
Sbjct: 41 CNFITRNGQECDKGSA-CPFRHIRGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECY 99
Query: 1951 YFLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSC 2007
++ + C NK CP+ H+ C + +G+C G CR +H +C + A G C
Sbjct: 100 FYSRFNACHNKECPFLHIDPQSKVKDCPWYKRGFCRHGPHCRHQHLRRVLCMDYLA-GFC 158
Query: 2008 ALGAKCRLHHP 2018
C+ HP
Sbjct: 159 PEAPSCKHMHP 169
Score = 41.6 bits (96), Expect = 4.7, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 10/83 (12%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DP-SKIAVCTKFLKGLCSNS-DCKLTHKVIPERM 1946
K C F++RF C+ N +CP++H DP SK+ C + +G C + C+ H R
Sbjct: 94 KMPECYFYSRFNACH--NKECPFLHIDPQSKVKDCPWYKRGFCRHGPHCRHQHL----RR 147
Query: 1947 PDCSYFLQGLCTNK-NCPYRHVH 1968
C +L G C +C + H H
Sbjct: 148 VLCMDYLAGFCPEAPSCKHMHPH 170
>gi|150864997|ref|XP_001384039.2| hypothetical protein PICST_27265 [Scheffersomyces stipitis CBS 6054]
gi|149386253|gb|ABN66010.2| cleavage and polyadenylation specificity factor, partial
[Scheffersomyces stipitis CBS 6054]
Length = 192
Score = 77.0 bits (188), Expect = 1e-10, Method: Composition-based stats.
Identities = 47/139 (33%), Positives = 68/139 (48%), Gaps = 11/139 (7%)
Query: 1891 RKYCQFFT-RFGKCNKDNGK-CPYIHDPSKI---AVCTKFLKGLCSNSD-CKLTHKVIPE 1944
R CQF+ + G + NG CP H S VC +L+GLC +D C+ H+
Sbjct: 35 RPVCQFYVPQKGPSSCPNGSSCPNKHVSSMYNNKIVCKHWLRGLCKKNDHCEFLHEYNLR 94
Query: 1945 RMPDCSYFLQ-GLCTNK-NCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPT 2000
+MP+C ++ + G CT C Y H+ C + KG+C DG C K+H +CP
Sbjct: 95 KMPECLFYSKNGFCTQTPECLYLHIDPQSKIPACPSYEKGFCPDGPNCTKRHVRKILCPL 154
Query: 2001 FKATGSCALGAKCRLHHPK 2019
+ +G C G +C HPK
Sbjct: 155 Y-VSGFCPKGPECEFTHPK 172
>gi|444317817|ref|XP_004179566.1| hypothetical protein TBLA_0C02360 [Tetrapisispora blattae CBS 6284]
gi|387512607|emb|CCH60047.1| hypothetical protein TBLA_0C02360 [Tetrapisispora blattae CBS 6284]
Length = 217
Score = 76.6 bits (187), Expect = 1e-10, Method: Composition-based stats.
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 14/132 (10%)
Query: 1901 GKCNKDNGKCPYIHDPSKI---AVCTKFLKGLCSN-SDCKLTHKVIPERMPDCSYFLQ-G 1955
G C + + +CP+ H PS VC +L+GLC S C+ H+ RMP+C +F + G
Sbjct: 47 GGCPRGS-QCPFKHIPSLFHNKIVCKHWLRGLCKKGSRCEFLHEYNLRRMPECVFFARNG 105
Query: 1956 LCTNK-NCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH-----SYVCPTFKATGSCAL 2009
CT CPYRHV + C + +G+C G C ++H + +C + TG C L
Sbjct: 106 FCTQAPECPYRHVKPEDHVELCTDYQRGFCPRGPSCARRHVNETTTTLCQCY-LTGFCPL 164
Query: 2010 G-AKCRLHHPKS 2020
G ++C HP++
Sbjct: 165 GSSQCPYAHPET 176
>gi|47211970|emb|CAF95292.1| unnamed protein product [Tetraodon nigroviridis]
Length = 291
Score = 76.3 bits (186), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/159 (27%), Positives = 67/159 (42%), Gaps = 36/159 (22%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF R C K CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFMR-AACMK-GAMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 F-----------------------------LQGLCTNKNCPYRHVHVNPNASTCEGFLKG 1982
+ + G C+NK CP+ H+ C + +G
Sbjct: 99 YSKFGWSILHFLFKSDRICTAGVVLMFCVCVAGECSNKECPFLHIDPESKIKDCPWYDRG 158
Query: 1983 YCADGDECRKKHS--YVCPTFKATGSCALGAKCRLHHPK 2019
+C G +CR +H+ +C + G C G C+ HP+
Sbjct: 159 FCKHGPDCRHRHTRRVICVNY-LVGFCPEGKSCKFMHPR 196
>gi|440493907|gb|ELQ76329.1| Polyadenylation factor I complex, subunit, Yth1 (CPSF subunit)
[Trachipleistophora hominis]
Length = 187
Score = 76.3 bits (186), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 9/133 (6%)
Query: 1893 YCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCS-NSDCKLTHKVIPERMPDCS 1950
YC+ F + +C N +C +H K VC +L+GLC N C+ H+ ++MP+C
Sbjct: 27 YCKPFQK-SQCF--NPRCQKLHVKLDKAVVCKHWLRGLCKKNEKCEFLHEYNLKKMPECW 83
Query: 1951 YFLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSC 2007
+F + G C+N C + H+ N + C + +G+C G CR KH +C ++ G C
Sbjct: 84 FFSKYGECSNTECHFLHIDPNSESKECLWYKRGFCRHGLMCRNKHVKKRLCYSY-FYGFC 142
Query: 2008 ALGAKCRLHHPKS 2020
G +C+ HPK+
Sbjct: 143 IDGPECKFGHPKA 155
>gi|170046237|ref|XP_001850680.1| cleavage and polyadenylation specificity factor subunit 4 [Culex
quinquefasciatus]
gi|167869066|gb|EDS32449.1| cleavage and polyadenylation specificity factor subunit 4 [Culex
quinquefasciatus]
Length = 291
Score = 76.3 bits (186), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/147 (29%), Positives = 66/147 (44%), Gaps = 7/147 (4%)
Query: 1894 CQFF--TRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDC 1949
C FF T +C K G CP+ H + VC +L+ LC D C+ H+ +MP+C
Sbjct: 41 CLFFNGTDGTECEKGAG-CPFRHIRGDRTIVCKHWLRALCKKGDQCEFLHEYDMTKMPEC 99
Query: 1950 SYFLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH-SYVCPTFKATGSC 2007
++ + C NK CP+ H+ C + +G+C G CR +H V F G C
Sbjct: 100 YFYSRFNACHNKECPFLHIDPESKIKDCPWYDRGFCRHGPNCRHRHVRRVLCNFYLAGFC 159
Query: 2008 ALGAKCRLHHPKSRSNGKKSRRSRKPK 2034
G C+ HP+ + + PK
Sbjct: 160 PDGPSCKFMHPRFELPPPPETKDQMPK 186
Score = 47.8 bits (112), Expect = 0.081, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F++RF C+ N +CP++H DP ++ D
Sbjct: 95 KMPECYFYSRFNACH--NKECPFLHIDPE--------------------------SKIKD 126
Query: 1949 CSYFLQGLCTN-KNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + NC +RHV C +L G+C DG C+ H
Sbjct: 127 CPWYDRGFCRHGPNCRHRHVR----RVLCNFYLAGFCPDGPSCKFMH 169
>gi|119609527|gb|EAW89121.1| hCG1641439 [Homo sapiens]
Length = 143
Score = 76.3 bits (186), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/99 (40%), Positives = 57/99 (57%), Gaps = 7/99 (7%)
Query: 1894 CQFFTRFGKCNKDNGK-CPYIHDP-SKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCS 1950
C FFT+ G C K GK CP+ HD K+ VC +L+GLC D CK H+ RMP+C
Sbjct: 41 CNFFTK-GLCEK--GKLCPFRHDRGEKMVVCKHWLRGLCKKGDHCKFLHQYDLTRMPECY 97
Query: 1951 YFLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGD 1988
++ + G C+NK C + HV + C + +G+C DG+
Sbjct: 98 FYSKFGDCSNKECSFLHVKPAFKSQDCPWYDQGFCKDGE 136
Score = 45.4 bits (106), Expect = 0.31, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 9/78 (11%)
Query: 1949 CSYFLQGLCTN-KNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSY------VCPTF 2001
C++F +GLC K CP+RH C+ +L+G C GD C+ H Y C +
Sbjct: 41 CNFFTKGLCEKGKLCPFRHDR-GEKMVVCKHWLRGLCKKGDHCKFLHQYDLTRMPECYFY 99
Query: 2002 KATGSCALGAKCRLHHPK 2019
G C+ +C H K
Sbjct: 100 SKFGDCS-NKECSFLHVK 116
>gi|395533099|ref|XP_003768601.1| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein [Sarcophilus harrisii]
Length = 170
Score = 75.9 bits (185), Expect = 2e-10, Method: Composition-based stats.
Identities = 45/128 (35%), Positives = 63/128 (49%), Gaps = 10/128 (7%)
Query: 1894 CQFFTRFGKCNKDNGK-CPYIHDP-SKIAVCTKFLKGLCSNSDC-KLTHKVIPERMPDCS 1950
C FF + G C K GK CP+ HD K VC +L+GLC SDC K H+ +MP+C
Sbjct: 41 CTFFLK-GLCEK--GKLCPFRHDDGEKTVVCKHWLRGLCKKSDCCKFLHQYDVTKMPECY 97
Query: 1951 YFLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSC 2007
++ + G C+NK C + H C + +G+C G C+ H +C + G C
Sbjct: 98 FYSKFGECSNKECLFLHTDSASKIRDCPWYDQGFCKYGPLCKFHHVRRVLCVNY-LVGFC 156
Query: 2008 ALGAKCRL 2015
G CR
Sbjct: 157 PEGPGCRF 164
>gi|347968471|ref|XP_003436228.1| AGAP013044-PA [Anopheles gambiae str. PEST]
gi|333467988|gb|EGK96785.1| AGAP013044-PA [Anopheles gambiae str. PEST]
Length = 296
Score = 75.9 bits (185), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 9/133 (6%)
Query: 1894 CQFF--TRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDC 1949
C FF + +C K N CP+ H + VC +L+GLC D C+ H+ +MP+C
Sbjct: 41 CLFFNASDGTECKKGN-SCPFRHIRGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPEC 99
Query: 1950 SYFLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGS 2006
++ + C NK CP+ H+ C + +G+C G CR +H +C + A G
Sbjct: 100 YFYSRFNACHNKECPFLHIDPESKIKDCPWYDRGFCRHGPNCRHRHVRRVLCNNYLA-GF 158
Query: 2007 CALGAKCRLHHPK 2019
C G +C+ HP+
Sbjct: 159 CPDGPECKYMHPR 171
Score = 51.2 bits (121), Expect = 0.007, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F++RF C+ N +CP++H DP ++ D
Sbjct: 95 KMPECYFYSRFNACH--NKECPFLHIDPE--------------------------SKIKD 126
Query: 1949 CSYFLQGLCTN-KNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + NC +RHV C +L G+C DG EC+ H
Sbjct: 127 CPWYDRGFCRHGPNCRHRHVR----RVLCNNYLAGFCPDGPECKYMH 169
>gi|452824309|gb|EME31313.1| CCCH-type zinc finger-containing protein [Galdieria sulphuraria]
Length = 224
Score = 75.9 bits (185), Expect = 3e-10, Method: Composition-based stats.
Identities = 43/129 (33%), Positives = 68/129 (52%), Gaps = 8/129 (6%)
Query: 1896 FFTRFGKCNKDNGKCPYIHDPS-KIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFL 1953
FF++ G C K + C Y H + ++ VC +L+GLC ++ C+ H+ +MP+C +F
Sbjct: 46 FFSKSG-CKKGSW-CQYRHARNDRLIVCKHWLRGLCKKAEYCEYLHEYDMSKMPECYFFS 103
Query: 1954 Q-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCALG 2010
+ G C+N C YRHV + C + +G+C G +CR +H CP + G C G
Sbjct: 104 KFGECSNTECLYRHVDPESRRNECPYYARGFCRHGAKCRYRHIKKVACPAY-LRGFCKDG 162
Query: 2011 AKCRLHHPK 2019
C+ H K
Sbjct: 163 PNCKFGHAK 171
>gi|443697259|gb|ELT97794.1| hypothetical protein CAPTEDRAFT_180092 [Capitella teleta]
Length = 274
Score = 75.1 bits (183), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 16/120 (13%)
Query: 1910 CPYIH-DPSKIAVCTKFLKGLCSN-SDCKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRH 1966
CP+ H + VC +L+GLC DC+ H+ +MP+C +F + G C NK CP+ H
Sbjct: 55 CPFRHIKGDRTVVCKHWLRGLCKKGDDCEFLHEYDMSKMPECYFFSKFGQCGNKECPFLH 114
Query: 1967 VHVNPNASTCEGFLKGYCADGDECRKKH-------SYVCPTFKATGSCALGAKCRLHHPK 2019
+ C + +G+C G C+ +H +Y+C G C G KC+ HP+
Sbjct: 115 IDPEQKMKDCAWYDRGFCRHGPNCKNRHVRRVMCINYMC------GFCLDGPKCKYVHPQ 168
Score = 51.6 bits (122), Expect = 0.005, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 38/114 (33%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C FF++FG+C N +CP++H DP ++M D
Sbjct: 92 KMPECYFFSKFGQCG--NKECPFLHIDPE--------------------------QKMKD 123
Query: 1949 CSYFLQGLCTN-KNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTF 2001
C+++ +G C + NC RHV C ++ G+C DG +C+ YV P F
Sbjct: 124 CAWYDRGFCRHGPNCKNRHVR----RVMCINYMCGFCLDGPKCK----YVHPQF 169
>gi|363749863|ref|XP_003645149.1| hypothetical protein Ecym_2619 [Eremothecium cymbalariae DBVPG#7215]
gi|356888782|gb|AET38332.1| Hypothetical protein Ecym_2619 [Eremothecium cymbalariae DBVPG#7215]
Length = 209
Score = 74.7 bits (182), Expect = 6e-10, Method: Composition-based stats.
Identities = 47/140 (33%), Positives = 71/140 (50%), Gaps = 13/140 (9%)
Query: 1891 RKYCQFF-TRFGKCNKDNGK-CPYIHD----PSKIAVCTKFLKGLCSNSD-CKLTHKVIP 1943
R CQ++ ++ G + NG CP H +KI VC +L+GLC +D C+ H+
Sbjct: 31 RPVCQYYNSKEGASSCPNGTLCPNKHVLPIFQNKI-VCKHWLRGLCKKNDQCEYLHEYNL 89
Query: 1944 ERMPDCSYFLQ-GLCTNK-NCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCP 1999
+MP+C +F + G CT C Y H+ N CE + G+C G C +KH +C
Sbjct: 90 RKMPECVFFTKNGYCTQSPECQYLHIDPNSKIQECEDYKMGFCPLGPSCTRKHVKKIICQ 149
Query: 2000 TFKATGSCALGAKCRLHHPK 2019
+ TG C +G +C HP+
Sbjct: 150 KY-VTGFCPVGKECDWEHPR 168
>gi|260824375|ref|XP_002607143.1| hypothetical protein BRAFLDRAFT_118661 [Branchiostoma floridae]
gi|229292489|gb|EEN63153.1| hypothetical protein BRAFLDRAFT_118661 [Branchiostoma floridae]
Length = 300
Score = 74.7 bits (182), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 66/131 (50%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C +F R G C K CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CDYFVR-GSCVK-GASCPFRHVRGEKSVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G C+ +H +C + G C
Sbjct: 99 YSKFGACSNKECPFLHIDPESKIKDCAWYDRGFCKHGPHCKNRHVRRTMCMNY-MVGFCP 157
Query: 2009 LGAKCRLHHPK 2019
G KC+ HPK
Sbjct: 158 EGPKCKYKHPK 168
>gi|324505807|gb|ADY42489.1| Zinc finger CCCH domain-containing protein 7 [Ascaris suum]
Length = 672
Score = 74.3 bits (181), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 51/107 (47%), Gaps = 5/107 (4%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDPS----KIAVCTKFLKGLCSNSDCKLTHKVIPERMPDC 1949
C F G C C Y H+ S K +VC FL G C ++ C +HK+ +MP C
Sbjct: 521 CYEFAEHGTCTA-GVFCVYEHNGSDSHSKESVCAGFLSGRCHSASCGYSHKLAAHQMPIC 579
Query: 1950 SYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSY 1996
++ + LC+ + CP+ HV CE F +G C G +C H Y
Sbjct: 580 DFYRRMLCSTERCPFLHVKYTDGLKPCEKFNRGICKHGTDCGNPHRY 626
>gi|256985198|ref|NP_080958.2| cleavage and polyadenylation specific factor 4-like isoform 1 [Mus
musculus]
Length = 228
Score = 74.3 bits (181), Expect = 8e-10, Method: Composition-based stats.
Identities = 48/148 (32%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDP-SKIAVCTKFLKGLCSNSDC-KLTHKVIPERMPDCSY 1951
C FF + G C K CP H+ K+ VC +L+GLC SDC H+ +MP C +
Sbjct: 41 CNFFAK-GLCVK-GMLCPLRHEQGEKLVVCKHWLRGLCRKSDCCDFLHQYDVSKMPVCYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCAD-GDECRKKHSY--VCPTFKATGSC 2007
+ G C+NK C + H+ C + +G+C + G C+ +H + +CP + TG C
Sbjct: 99 HSKFGNCSNKECLFLHLKPVLKLQDCPWYNQGFCKEVGPLCKYRHVHQVLCPNY-FTGFC 157
Query: 2008 ALGAKCRLHHPKSRSNGKKSRRSRKPKN 2035
G +C+ HPK S +P N
Sbjct: 158 PEGPQCQFGHPKMSPPFHPSNVKLQPVN 185
>gi|406608109|emb|CCH40543.1| mRNA 3'-end-processing protein YTH1 [Wickerhamomyces ciferrii]
Length = 219
Score = 74.3 bits (181), Expect = 8e-10, Method: Composition-based stats.
Identities = 56/182 (30%), Positives = 82/182 (45%), Gaps = 13/182 (7%)
Query: 1891 RKYCQFFTRFGKCNKDNGK-CPYIH-DP--SKIAVCTKFLKGLCSNSD-CKLTHKVIPER 1945
R CQF+ G C NG C H P S VC +L+GLC D C+ H+ +
Sbjct: 31 RPVCQFWNGHGGC--PNGDLCHNKHVSPMYSNKIVCKHWLRGLCKKGDHCEFLHEYNLRK 88
Query: 1946 MPDCSYFLQ-GLCTNK-NCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTF 2001
MP+C ++ + G CT C Y H+ C + +G+C +G C+ +H +C F
Sbjct: 89 MPECLFYSKNGFCTQTPECQYLHIDPQSKIPECLNYSRGFCPEGPNCKNRHIKKIICQNF 148
Query: 2002 KATGSCALGAKCRLHHPKSRSNGKKSR-RSRKPKNTHGRYFGSMLVEDSESQTAMSERPT 2060
TG C G C L HPK +K R R +P N+ R +E + A E+
Sbjct: 149 -LTGFCPDGPDCDLAHPKFDLLPEKLRIRPDRPVNSTSRSNEKTFLEIQLEKEAKEEQER 207
Query: 2061 VQ 2062
++
Sbjct: 208 LE 209
>gi|225718956|gb|ACO15324.1| Cleavage and polyadenylation specificity factor subunit 4 [Caligus
clemensi]
Length = 295
Score = 73.9 bits (180), Expect = 8e-10, Method: Composition-based stats.
Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 8/131 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+F+ + C K CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFYVK-ATCAKGT-SCPFRHVRGDKTIVCKHWLRGLCKKGDTCEFLHEYDMSKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCA 2008
+ + C NK CP+ H+ C + +G+C G CR +H +C + A G C
Sbjct: 99 YSRFNACHNKECPFLHIDPESKIRDCPWYDRGFCRHGPSCRHRHVRRVLCTNYLA-GFCP 157
Query: 2009 LGAKCRLHHPK 2019
G C HP+
Sbjct: 158 EGPNCTDAHPR 168
Score = 43.5 bits (101), Expect = 1.5, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 34/107 (31%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
K C F++RF C+ N +CP++H DP ++ D
Sbjct: 92 KMPECYFYSRFNACH--NKECPFLHIDPE--------------------------SKIRD 123
Query: 1949 CSYFLQGLCTN-KNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ +G C + +C +RHV C +L G+C +G C H
Sbjct: 124 CPWYDRGFCRHGPSCRHRHVR----RVLCTNYLAGFCPEGPNCTDAH 166
>gi|148702474|gb|EDL34421.1| DNA segment, Chr 11, ERATO Doi 636, expressed, isoform CRA_c [Mus
musculus]
Length = 238
Score = 73.9 bits (180), Expect = 9e-10, Method: Composition-based stats.
Identities = 48/148 (32%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDP-SKIAVCTKFLKGLCSNSDC-KLTHKVIPERMPDCSY 1951
C FF + G C K CP H+ K+ VC +L+GLC SDC H+ +MP C +
Sbjct: 51 CNFFAK-GLCVK-GMLCPLRHEQGEKLVVCKHWLRGLCRKSDCCDFLHQYDVSKMPVCYF 108
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCAD-GDECRKKHSY--VCPTFKATGSC 2007
+ G C+NK C + H+ C + +G+C + G C+ +H + +CP + TG C
Sbjct: 109 HSKFGNCSNKECLFLHLKPVLKLQDCPWYNQGFCKEVGPLCKYRHVHQVLCPNY-FTGFC 167
Query: 2008 ALGAKCRLHHPKSRSNGKKSRRSRKPKN 2035
G +C+ HPK S +P N
Sbjct: 168 PEGPQCQFGHPKMSPPFHPSNVKLQPVN 195
>gi|388579009|gb|EIM19339.1| hypothetical protein WALSEDRAFT_61516 [Wallemia sebi CBS 633.66]
Length = 285
Score = 73.9 bits (180), Expect = 9e-10, Method: Composition-based stats.
Identities = 48/144 (33%), Positives = 67/144 (46%), Gaps = 27/144 (18%)
Query: 1903 CNKDNGKCPYIH-DPS-------------------KIAVCTKFLKGLCSNSD-CKLTHKV 1941
C + N CPY H DP+ + VC +L+GLC D C+ H+
Sbjct: 3 CPRGN-NCPYRHTDPAPKNFEPIPPLPTNLRERERAVTVCKHWLRGLCKKGDACEFLHEY 61
Query: 1942 IPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYV 1997
+MP+C +F++ G C N + C YRH + + C +L+G+C G C KH
Sbjct: 62 DLRKMPECWWFVKWGWCANGEECLYRHTSLEGRKNECPEYLRGFCRRGPYCPFKHIRRAA 121
Query: 1998 CPTFKATGSCALGAKCRLHHPKSR 2021
CP + A G C G C HPKSR
Sbjct: 122 CPAYLA-GYCPDGPYCARGHPKSR 144
>gi|45190275|ref|NP_984529.1| AEL331Wp [Ashbya gossypii ATCC 10895]
gi|74693942|sp|Q758T3.1|YTH1_ASHGO RecName: Full=mRNA 3'-end-processing protein YTH1
gi|44983171|gb|AAS52353.1| AEL331Wp [Ashbya gossypii ATCC 10895]
gi|374107743|gb|AEY96650.1| FAEL331Wp [Ashbya gossypii FDAG1]
Length = 209
Score = 73.9 bits (180), Expect = 1e-09, Method: Composition-based stats.
Identities = 48/139 (34%), Positives = 68/139 (48%), Gaps = 13/139 (9%)
Query: 1891 RKYCQFF-TRFGKCNKDNGK-CPYIHD----PSKIAVCTKFLKGLCSNSD-CKLTHKVIP 1943
R CQ++ ++ G + NG CP H +KI VC +L+GLC +D C+ H+
Sbjct: 31 RPVCQYYNSKEGASSCPNGTLCPNKHVLPIFQNKI-VCKHWLRGLCKKNDQCEYLHEYNL 89
Query: 1944 ERMPDCSYFLQ-GLCTNK-NCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCP 1999
+MP+C +F + G CT C Y H+ CE + G+C G C KH +CP
Sbjct: 90 RKMPECVFFTKNGYCTQSPECQYLHIDPTSKVQQCEDYRMGFCPLGTACPCKHVKKIICP 149
Query: 2000 TFKATGSCALGAKCRLHHP 2018
+ TG C LG C HP
Sbjct: 150 KY-VTGFCPLGRDCDWEHP 167
Score = 41.2 bits (95), Expect = 7.3, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 13/84 (15%)
Query: 1889 RKRKYCQFFTRFGKCNKDNGKCPYIH-DP-SKIAVCTKFLKGLC---SNSDCKLTHKVIP 1943
RK C FFT+ G C + + +C Y+H DP SK+ C + G C + CK K+I
Sbjct: 90 RKMPECVFFTKNGYCTQ-SPECQYLHIDPTSKVQQCEDYRMGFCPLGTACPCKHVKKII- 147
Query: 1944 ERMPDCSYFLQGLCT-NKNCPYRH 1966
C ++ G C ++C + H
Sbjct: 148 -----CPKYVTGFCPLGRDCDWEH 166
>gi|324501456|gb|ADY40649.1| Zinc finger CCCH domain-containing protein 7 [Ascaris suum]
Length = 705
Score = 73.6 bits (179), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 51/107 (47%), Gaps = 5/107 (4%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDPS----KIAVCTKFLKGLCSNSDCKLTHKVIPERMPDC 1949
C F G C C Y H+ S K +VC FL G C ++ C +HK+ +MP C
Sbjct: 554 CYEFAEHGTCTA-GVFCVYEHNGSDSHSKESVCAGFLSGRCHSASCGYSHKLAAHQMPIC 612
Query: 1950 SYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSY 1996
++ + LC+ + CP+ HV CE F +G C G +C H Y
Sbjct: 613 DFYRRMLCSTERCPFLHVKYTDGLKPCEKFNRGICKHGTDCGNPHRY 659
>gi|367012315|ref|XP_003680658.1| hypothetical protein TDEL_0C05580 [Torulaspora delbrueckii]
gi|359748317|emb|CCE91447.1| hypothetical protein TDEL_0C05580 [Torulaspora delbrueckii]
Length = 210
Score = 73.6 bits (179), Expect = 1e-09, Method: Composition-based stats.
Identities = 52/150 (34%), Positives = 77/150 (51%), Gaps = 14/150 (9%)
Query: 1891 RKYCQFF-TRFGKCNKDNGK-CPYIHD----PSKIAVCTKFLKGLCSNSD-CKLTHKVIP 1943
R C+F+ +R G + G CP H +KI VC +L+GLC +D C+ H+
Sbjct: 31 RPVCEFYNSREGPQSCPRGAACPKKHVLPIFQNKI-VCKHWLRGLCKKNDQCEYLHEYNL 89
Query: 1944 ERMPDCSYFLQ-GLCTNK-NCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCP 1999
+MP+C +F + G CT C Y H+ + CE + G+CA G +C+K+H +CP
Sbjct: 90 RKMPECVFFSKNGYCTQTPECQYLHLDPQARIALCEDYTMGFCALGAQCKKRHVKKTLCP 149
Query: 2000 TFKATGSCALGAK-CRLHHPKSRSNGKKSR 2028
+ TG C LG + C + HP K SR
Sbjct: 150 RY-ITGFCPLGRRECDMAHPNFVVPSKISR 178
>gi|190345069|gb|EDK36887.2| hypothetical protein PGUG_00985 [Meyerozyma guilliermondii ATCC 6260]
Length = 199
Score = 73.2 bits (178), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 74/153 (48%), Gaps = 14/153 (9%)
Query: 1891 RKYCQFF--TRFGKCNKDNGKCPYIHDPSKIA---VCTKFLKGLCSNSD-CKLTHKVIPE 1944
R CQFF + G C N CP H P+ + VC +L+GLC +D C+ H+
Sbjct: 35 RPVCQFFLPSTPGSCPNGNN-CPNKHVPTMYSNKIVCKHWLRGLCKKNDHCEFLHEYNLR 93
Query: 1945 RMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPT 2000
+MP+C ++ + G CT C Y HV C + KG+C +G +C +H +CP
Sbjct: 94 KMPECLFYSKNGFCTQTPECLYLHVDPQSKIPACPNYEKGFCPEGPKCPNRHVRKIMCPL 153
Query: 2001 FKATGSCALGAKCRLHHPKSRSNGKKSRRSRKP 2033
+ TG C GA+C HP R G R KP
Sbjct: 154 W-VTGFCPKGAECDYSHP--RFEGMIDRLRIKP 183
>gi|67522160|ref|XP_659141.1| hypothetical protein AN1537.2 [Aspergillus nidulans FGSC A4]
gi|40745088|gb|EAA64244.1| hypothetical protein AN1537.2 [Aspergillus nidulans FGSC A4]
Length = 448
Score = 73.2 bits (178), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 1942 IPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLK-GYCADGDECRKKHSYVCPT 2000
I R P C +FL+G C+N C Y HV V P A C F GYC G+ C ++H + CP
Sbjct: 305 ISSRSPACVHFLRGRCSNPECRYAHVRVTPGAPVCRAFATLGYCDKGETCEERHVHECPD 364
Query: 2001 FKATGSCALGAKCRLHH 2017
+ TG C CRL H
Sbjct: 365 YANTGVCK-KKHCRLPH 380
>gi|444724275|gb|ELW64885.1| Cleavage and polyadenylation specificity factor subunit 4 [Tupaia
chinensis]
Length = 223
Score = 72.8 bits (177), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 8/129 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 10 CEFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 67
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK CP+ H+ C + +G+C G CR +H+ +C + G C
Sbjct: 68 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCP 126
Query: 2009 LGAKCRLHH 2017
G C+ H
Sbjct: 127 EGPSCKFMH 135
>gi|255713144|ref|XP_002552854.1| KLTH0D02948p [Lachancea thermotolerans]
gi|238934234|emb|CAR22416.1| KLTH0D02948p [Lachancea thermotolerans CBS 6340]
Length = 210
Score = 72.8 bits (177), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/140 (35%), Positives = 73/140 (52%), Gaps = 14/140 (10%)
Query: 1891 RKYCQFFT-RFGKCNKDNGK-CPYIHD----PSKIAVCTKFLKGLCSNSD-CKLTHKVIP 1943
R C+F+ R G + NG CP H +KI VC +L+GLC +D C+ H+
Sbjct: 31 RPVCEFYNPREGPSSCPNGNSCPNKHVLPIFQNKI-VCKHWLRGLCKKNDQCEYLHEYNL 89
Query: 1944 ERMPDCSYFLQ-GLCTNK-NCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCP 1999
+MP+C +F + G CT C Y H++ + CE + G+C G +C+K+H +CP
Sbjct: 90 RKMPECVFFSKNGYCTQSPECQYLHINPSSKIQECEDYRMGFCPAGAQCKKRHIKKTMCP 149
Query: 2000 TFKATGSCALGA-KCRLHHP 2018
+ TG C LG C + HP
Sbjct: 150 RY-ITGFCPLGRLDCEMEHP 168
>gi|170586316|ref|XP_001897925.1| zinc finger protein [Brugia malayi]
gi|158594320|gb|EDP32904.1| zinc finger protein, putative [Brugia malayi]
Length = 337
Score = 72.8 bits (177), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
Query: 1910 CPYIHDPS-KIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQGL-CTNKNCPYRH 1966
CP H K VC +L+GLC D C+ H+ +MP+C +F + + C+N+ CP+RH
Sbjct: 76 CPLRHIVGDKAVVCKHWLRGLCKKGDQCEFLHEYDLSKMPECFFFSKYMACSNRECPFRH 135
Query: 1967 VHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHP 2018
+ C + +G+C G C+ +H +CP + A G C G C+ HP
Sbjct: 136 IDPESKIKDCPWYDRGFCRHGPFCKHRHRRRVLCPNYLA-GFCMDGGDCKYAHP 188
>gi|324506295|gb|ADY42692.1| Cleavage and polyadenylation specificity factor subunit 4 [Ascaris
suum]
Length = 342
Score = 72.4 bits (176), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 1918 KIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQGL-CTNKNCPYRHVHVNPNAST 1975
K VC +L+GLC D C+ H+ +MP+C +F + + C+N+ CP+RH+
Sbjct: 90 KAVVCKHWLRGLCKKGDQCEFLHEYDLSKMPECFFFSKYMACSNRECPFRHIDPESKIKD 149
Query: 1976 CEGFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHP 2018
C + +G+C G C+ +H +CP + A G C G C+ HP
Sbjct: 150 CPWYDRGFCRHGPYCKHRHRRRVLCPNYLA-GFCPDGKNCKYAHP 193
Score = 41.2 bits (95), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 10/77 (12%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DP-SKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCS 1950
C FF+++ C+ N +CP+ H DP SKI C + +G C + CK H+ R C
Sbjct: 122 CFFFSKYMACS--NRECPFRHIDPESKIKDCPWYDRGFCRHGPYCKHRHR----RRVLCP 175
Query: 1951 YFLQGLCTN-KNCPYRH 1966
+L G C + KNC Y H
Sbjct: 176 NYLAGFCPDGKNCKYAH 192
>gi|402593601|gb|EJW87528.1| cleavage and polyadenylation specific factor 4 [Wuchereria bancrofti]
Length = 337
Score = 72.4 bits (176), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
Query: 1910 CPYIHDPS-KIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQGL-CTNKNCPYRH 1966
CP H K VC +L+GLC D C+ H+ +MP+C +F + + C+N+ CP+RH
Sbjct: 76 CPLRHIVGDKAVVCKHWLRGLCKKGDQCEFLHEYDLSKMPECFFFSKYMACSNRECPFRH 135
Query: 1967 VHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHP 2018
+ C + +G+C G C+ +H +CP + A G C G C+ HP
Sbjct: 136 IDPESKIKDCPWYDRGFCRHGPFCKHRHRRRVLCPNYLA-GFCMDGGDCKYAHP 188
>gi|385301812|gb|EIF45975.1| protein yth1 [Dekkera bruxellensis AWRI1499]
Length = 270
Score = 72.4 bits (176), Expect = 3e-09, Method: Composition-based stats.
Identities = 50/145 (34%), Positives = 69/145 (47%), Gaps = 23/145 (15%)
Query: 1891 RKYCQFFTRFGKCNKDNG-KCPYIHD-----PSKI----AVCTKFLKGLCS-NSDCKLTH 1939
R C F+ N NG CPY D PSKI VC +L+GLC DC H
Sbjct: 99 RPICPFW------NDSNGTXCPYGRDCPLKHPSKIFKNKIVCKYWLRGLCKMGDDCDFLH 152
Query: 1940 KVIPERMPDCSYFL-QGLCTNKN-CPYRHVHVNPNASTCEGFLK-GYCADGDECRKKH-- 1994
+ +MP+C+Y+ G+C + C Y HV C + G+C +G +C ++H
Sbjct: 153 EYNLSKMPECAYYAANGVCLQADECIYLHVDPKSKIPECYNYSNLGFCPEGPKCPRRHVR 212
Query: 1995 SYVCPTFKATGSCALGAKCRLHHPK 2019
+CP + A G C G +C L HPK
Sbjct: 213 KVMCPRYLA-GFCPKGPECELAHPK 236
>gi|335286078|ref|XP_003355014.1| PREDICTED: hypothetical protein LOC100627816 [Sus scrofa]
Length = 992
Score = 72.4 bits (176), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 40/57 (70%), Gaps = 3/57 (5%)
Query: 1892 KYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSD--CKLTHKVIPERM 1946
+YC ++ RFG+CN+ CPYIHDP K+AVCT+F++G C +D C +H V E++
Sbjct: 59 EYCMYYNRFGRCNRGQ-HCPYIHDPEKVAVCTRFVRGTCKKTDGTCPFSHHVSKEKL 114
Score = 67.4 bits (163), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 31/42 (73%)
Query: 1946 MPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADG 1987
MP CSYFL+G+C+N NCPY HV+V+ A C FLKGYC G
Sbjct: 272 MPVCSYFLKGICSNSNCPYSHVYVSRRAEVCTDFLKGYCPLG 313
Score = 46.6 bits (109), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 1919 IAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLC 1957
+ VC+ FLKG+CSNS+C +H + R C+ FL+G C
Sbjct: 272 MPVCSYFLKGICSNSNCPYSHVYVSRRAEVCTDFLKGYC 310
>gi|149248224|ref|XP_001528499.1| protein YTH1 [Lodderomyces elongisporus NRRL YB-4239]
gi|146448453|gb|EDK42841.1| protein YTH1 [Lodderomyces elongisporus NRRL YB-4239]
Length = 211
Score = 72.4 bits (176), Expect = 3e-09, Method: Composition-based stats.
Identities = 48/140 (34%), Positives = 67/140 (47%), Gaps = 13/140 (9%)
Query: 1891 RKYCQFFT-RFGKCNKDNG-KCPYIHDPSKI----AVCTKFLKGLCSNSD-CKLTHKVIP 1943
R C FF +F + NG CP H PS+ VC +L+GLC D C+ H+
Sbjct: 35 RPVCPFFNHQFPTTSCPNGTNCPNKH-PSQTFKNKLVCKHWLRGLCKKGDNCEFLHEYNL 93
Query: 1944 ERMPDCSYFLQ-GLCTNK-NCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCP 1999
+MP+C ++ + G CT C Y H+ C + G+C +G C+ +H VCP
Sbjct: 94 RKMPECVFYSKNGYCTQTPECLYLHIDPQSKIPECMNYNAGFCLEGPNCKNRHVRRIVCP 153
Query: 2000 TFKATGSCALGAKCRLHHPK 2019
F A G C G +C HPK
Sbjct: 154 NFLA-GFCPEGPECEFTHPK 172
>gi|67483862|ref|XP_657151.1| zinc finger protein [Entamoeba histolytica HM-1:IMSS]
gi|56474390|gb|EAL51762.1| zinc finger protein, putative [Entamoeba histolytica HM-1:IMSS]
gi|449708917|gb|EMD48290.1| zinc finger protein, putative [Entamoeba histolytica KU27]
Length = 178
Score = 72.4 bits (176), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 16/142 (11%)
Query: 1913 IHDPSKIAVCTKFLKGLC-SNSDCKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRHVHVN 1970
I K VC +L+G+C ++C H++ ER P C +F++ G C CP++H
Sbjct: 31 IKSNEKTIVCQHWLRGMCRKGANCDFLHRLDEERTPACHHFVKYGKCEKPECPFKHEDPQ 90
Query: 1971 PNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHP---------- 2018
A CE + +G+C G +C+ H +CP F G C G KC+ HP
Sbjct: 91 -KAIPCEWYKRGFCKHGKKCKHGHVPKLMCPLF-YLGFCPYGKKCKFVHPTISVPRETIE 148
Query: 2019 KSRSNGKKSRRSRKPKNTHGRY 2040
K++ G++ R KN + ++
Sbjct: 149 KTQPRGERFPRDGDEKNANFKH 170
Score = 46.2 bits (108), Expect = 0.23, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 12/113 (10%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYF 1952
C F ++GKC K +CP+ H DP K C + +G C + K H +P+ M C F
Sbjct: 68 CHHFVKYGKCEKP--ECPFKHEDPQKAIPCEWYKRGFCKHGK-KCKHGHVPKLM--CPLF 122
Query: 1953 LQGLCT-NKNCPYRHVHVNPNASTCEGFL---KGYCADGDE--CRKKHSYVCP 1999
G C K C + H ++ T E + + DGDE KH + P
Sbjct: 123 YLGFCPYGKKCKFVHPTISVPRETIEKTQPRGERFPRDGDEKNANFKHEFTKP 175
>gi|407034648|gb|EKE37314.1| zinc finger protein, putative [Entamoeba nuttalli P19]
Length = 178
Score = 72.0 bits (175), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 16/142 (11%)
Query: 1913 IHDPSKIAVCTKFLKGLC-SNSDCKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRHVHVN 1970
I K VC +L+G+C ++C H++ ER P C +F++ G C CP++H
Sbjct: 31 IKSNEKTIVCQHWLRGMCRKGANCDFLHRLDEERTPACHHFVKYGKCEKPECPFKHEDPQ 90
Query: 1971 PNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHP---------- 2018
A CE + +G+C G +C+ H +CP F G C G KC+ HP
Sbjct: 91 -KAIPCEWYKRGFCKHGKKCKHGHVPKLMCPLF-YLGFCPYGKKCKFVHPTISVPRETIE 148
Query: 2019 KSRSNGKKSRRSRKPKNTHGRY 2040
K++ G++ R KN + ++
Sbjct: 149 KTQPRGERFPRDGDDKNANFKH 170
Score = 45.1 bits (105), Expect = 0.45, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYF 1952
C F ++GKC K +CP+ H DP K C + +G C + K H +P+ M C F
Sbjct: 68 CHHFVKYGKCEKP--ECPFKHEDPQKAIPCEWYKRGFCKHGK-KCKHGHVPKLM--CPLF 122
Query: 1953 LQGLCT-NKNCPYRHVHVNPNASTCE 1977
G C K C + H ++ T E
Sbjct: 123 YLGFCPYGKKCKFVHPTISVPRETIE 148
>gi|448509088|ref|XP_003866056.1| transcription factor [Candida orthopsilosis Co 90-125]
gi|380350394|emb|CCG20616.1| transcription factor [Candida orthopsilosis Co 90-125]
Length = 452
Score = 72.0 bits (175), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 86/193 (44%), Gaps = 22/193 (11%)
Query: 1843 RLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLR---------LARKRKY 1893
R++I ++Y + NG L + A + V W+ H + +RK+
Sbjct: 148 RVLINGEKYSVVENGYMLFPLTYYKN---AGDDVFWNDHWYKATKSGYYKMQGCSRKKSM 204
Query: 1894 --CQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSY 1951
C++FT G C K C Y HD ++I +C FL G C+NS+C L H + P C +
Sbjct: 205 EGCRYFTESGFCAK-GSNCGYKHDKARIRICPFFLNGSCTNSNCLLNHNLNHHNTPLCYF 263
Query: 1952 FLQGLCTNKNCPYRHVHV----NPN--ASTCEGFLKG-YCADGDECRKKHSYVCPTFKAT 2004
++ CTN C Y H+ +PN S C F G +C G C H + CP +
Sbjct: 264 KMEKRCTNSQCRYSHLAPEYSGDPNYEISICRPFAVGHWCPRGRNCPFLHVWNCPDYDEE 323
Query: 2005 GSCALGAKCRLHH 2017
+C G C L H
Sbjct: 324 LNCPRGDTCTLRH 336
>gi|401403796|ref|XP_003881577.1| hypothetical protein NCLIV_013370 [Neospora caninum Liverpool]
gi|325115990|emb|CBZ51544.1| hypothetical protein NCLIV_013370 [Neospora caninum Liverpool]
Length = 493
Score = 72.0 bits (175), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 54/111 (48%), Gaps = 21/111 (18%)
Query: 1874 EKVRWSLHTARLRLARKRK----YCQFFTRFGKCNKDNGKCPYIHDPSK----------- 1918
E VR SL + + + R +C+F+ FG C ++ CP+ HD S+
Sbjct: 337 ESVRPSLESGKSAAPKFRNRSLTFCKFYNGFGYC-RNGDSCPFYHDRSRETQLTERCEHV 395
Query: 1919 ---IAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRH 1966
VC +LKGLC ++DC L H+ P C+ FLQGLC C YRH
Sbjct: 396 NEEPVVCRLYLKGLCESADCSLAHEA--PVTPVCARFLQGLCIRDECMYRH 444
>gi|148702476|gb|EDL34423.1| DNA segment, Chr 11, ERATO Doi 636, expressed, isoform CRA_e [Mus
musculus]
Length = 153
Score = 71.6 bits (174), Expect = 5e-09, Method: Composition-based stats.
Identities = 44/136 (32%), Positives = 67/136 (49%), Gaps = 8/136 (5%)
Query: 1910 CPYIHDP-SKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRH 1966
CP H+ K+ VC +L+GLC SD C H+ +MP C + + G C+NK C + H
Sbjct: 3 CPLRHEQGEKLVVCKHWLRGLCRKSDCCDFLHQYDVSKMPVCYFHSKFGNCSNKECLFLH 62
Query: 1967 VHVNPNASTCEGFLKGYCAD-GDECRKKHSY--VCPTFKATGSCALGAKCRLHHPKSRSN 2023
+ C + +G+C + G C+ +H + +CP + TG C G +C+ HPK
Sbjct: 63 LKPVLKLQDCPWYNQGFCKEVGPLCKYRHVHQVLCPNY-FTGFCPEGPQCQFGHPKMSPP 121
Query: 2024 GKKSRRSRKPKNTHGR 2039
S KP HG+
Sbjct: 122 FHPSNVKAKPM-VHGQ 136
Score = 63.2 bits (152), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/115 (33%), Positives = 57/115 (49%), Gaps = 15/115 (13%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH--DPSKIAVC---TKFLKGLCSNSDCKLTHKVIPERMPD 1948
C+ + R G C K + C ++H D SK+ VC +KF G CSN +C H ++ D
Sbjct: 16 CKHWLR-GLCRKSDC-CDFLHQYDVSKMPVCYFHSKF--GNCSNKECLFLHLKPVLKLQD 71
Query: 1949 CSYFLQGLCTNKN--CPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTF 2001
C ++ QG C C YRHVH C + G+C +G +C+ H + P F
Sbjct: 72 CPWYNQGFCKEVGPLCKYRHVH----QVLCPNYFTGFCPEGPQCQFGHPKMSPPF 122
>gi|334322934|ref|XP_001378504.2| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein-like [Monodelphis domestica]
Length = 312
Score = 71.6 bits (174), Expect = 5e-09, Method: Composition-based stats.
Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 8/127 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDP-SKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C FF + G C K CP+ HD K VC +L+GLC SD CK H+ +MP+C +
Sbjct: 41 CTFFLK-GFCEKGQ-LCPFRHDDGEKTVVCKHWLRGLCKKSDHCKFLHQYDITKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCA 2008
+ + G C+NK C + H C + +G+C G C+ +H+ +C + G C
Sbjct: 99 YSKFGECSNKECLFLHADPAFKIRDCPWYDQGFCKYGLLCKFRHTRRVLCTNY-LVGFCP 157
Query: 2009 LGAKCRL 2015
G C+
Sbjct: 158 EGPDCKF 164
>gi|119597068|gb|EAW76662.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform CRA_a
[Homo sapiens]
Length = 216
Score = 71.6 bits (174), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 6/115 (5%)
Query: 1910 CPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRH 1966
CP+ H K VC +L+GLC D C+ H+ +MP+C ++ + G C+NK CP+ H
Sbjct: 2 CPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLH 61
Query: 1967 VHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCALGAKCRLHHPK 2019
+ C + +G+C G CR +H+ +C + G C G C+ HP+
Sbjct: 62 IDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY-LVGFCPEGPSCKFMHPR 115
>gi|294656139|ref|XP_458388.2| DEHA2C16126p [Debaryomyces hansenii CBS767]
gi|218511904|sp|Q6BTT1.2|YTH1_DEBHA RecName: Full=mRNA 3'-end-processing protein YTH1
gi|199430889|emb|CAG86470.2| DEHA2C16126p [Debaryomyces hansenii CBS767]
Length = 223
Score = 71.2 bits (173), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 80/172 (46%), Gaps = 14/172 (8%)
Query: 1858 NQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRFGKCNK-DNGK-CPYIHD 1915
NQ+I P R + E + L L R CQF+ N NG CP+ H
Sbjct: 5 NQVIH-PDTRNKRFKFEP--FLLKEYNFGLDPDRPVCQFYNPSNPNNSCPNGSLCPHKHV 61
Query: 1916 PSKIA---VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHV 1969
S + VC +L+GLC +D C+ H+ +MP+C ++ + G CT C Y HV
Sbjct: 62 SSMYSNKIVCKHWLRGLCKKNDHCEFLHEYNLRKMPECLFYSKNGFCTQTPECLYLHVDP 121
Query: 1970 NPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPK 2019
C + KG+C DG +C +H +CP + TG C GA+C HP+
Sbjct: 122 QSKIPPCSSYEKGFCPDGPKCANRHIRKIMCPLW-LTGFCPKGAECDYTHPR 172
>gi|167377692|ref|XP_001734501.1| mRNA 3'-end-processing protein YTH1 [Entamoeba dispar SAW760]
gi|165903960|gb|EDR29338.1| mRNA 3'-end-processing protein YTH1, putative [Entamoeba dispar
SAW760]
Length = 166
Score = 71.2 bits (173), Expect = 6e-09, Method: Composition-based stats.
Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 6/110 (5%)
Query: 1913 IHDPSKIAVCTKFLKGLC-SNSDCKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRHVHVN 1970
I K VC +L+G+C ++C H++ ER P C +F++ G C CP++H
Sbjct: 19 IKSNEKTIVCQHWLRGMCRKGANCDFLHRLDEERTPACHHFVKYGKCEKPECPFKHEDPQ 78
Query: 1971 PNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHP 2018
A CE + +G+C G +C+ H +CP F G C G KC+ HP
Sbjct: 79 -KAIPCEWYKRGFCKHGKKCKHGHVPKLMCPLF-YLGFCPYGKKCKFVHP 126
Score = 45.1 bits (105), Expect = 0.51, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYF 1952
C F ++GKC K +CP+ H DP K C + +G C + K H +P+ M C F
Sbjct: 56 CHHFVKYGKCEKP--ECPFKHEDPQKAIPCEWYKRGFCKHGK-KCKHGHVPKLM--CPLF 110
Query: 1953 LQGLCT-NKNCPYRHVHVNPNASTCE 1977
G C K C + H ++ T E
Sbjct: 111 YLGFCPYGKKCKFVHPTISVPRETIE 136
>gi|440802647|gb|ELR23576.1| CCCHtype Zn finger-containing protein [Acanthamoeba castellanii str.
Neff]
Length = 284
Score = 71.2 bits (173), Expect = 7e-09, Method: Composition-based stats.
Identities = 43/132 (32%), Positives = 65/132 (49%), Gaps = 9/132 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYF 1952
C+F+ + G C CP+ H VC +L+GLC + C+ H+ ++MP C +F
Sbjct: 46 CKFYMK-GNCVLGQ-TCPFRHVYGDKEVCKHWLRGLCKKGESCEYLHEYRLDKMPICYFF 103
Query: 1953 LQ-GLCTNKN--CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSC 2007
+ G C+N + C +RHV C + +G+C G CR KH +C + G C
Sbjct: 104 SKFGECSNPSGECMFRHVSPEEKMRECPWYARGFCKHGPRCRHKHVRKPLCEAY-MIGFC 162
Query: 2008 ALGAKCRLHHPK 2019
G C+L HPK
Sbjct: 163 PDGPLCKLGHPK 174
Score = 48.9 bits (115), Expect = 0.031, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 35/117 (29%)
Query: 1880 LHTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTH 1939
LH RL K C FF++FG+C+ +G+C + H
Sbjct: 89 LHEYRLD---KMPICYFFSKFGECSNPSGECMFRH------------------------- 120
Query: 1940 KVIP-ERMPDCSYFLQGLCTN-KNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
V P E+M +C ++ +G C + C ++HV CE ++ G+C DG C+ H
Sbjct: 121 -VSPEEKMRECPWYARGFCKHGPRCRHKHVR----KPLCEAYMIGFCPDGPLCKLGH 172
>gi|448091693|ref|XP_004197393.1| Piso0_004645 [Millerozyma farinosa CBS 7064]
gi|448096266|ref|XP_004198424.1| Piso0_004645 [Millerozyma farinosa CBS 7064]
gi|359378815|emb|CCE85074.1| Piso0_004645 [Millerozyma farinosa CBS 7064]
gi|359379846|emb|CCE84043.1| Piso0_004645 [Millerozyma farinosa CBS 7064]
Length = 216
Score = 70.9 bits (172), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 10/151 (6%)
Query: 1887 LARKRKYCQFFTRFGKCNKDNGK-CPYIHDPSKIA---VCTKFLKGLCSNSD-CKLTHKV 1941
L R CQF+ + NG CP H S + VC +L+GLC +D C+ H+
Sbjct: 31 LNPDRPVCQFYVPSNPNSCPNGNDCPNKHVSSMYSNKIVCKHWLRGLCKKNDHCEFLHEY 90
Query: 1942 IPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYV 1997
+MP+C ++ + G CT C Y HV C + +G+C DG +C +H +
Sbjct: 91 NLRKMPECLFYSKNGFCTQTPECLYLHVDPQSKIPECPNYERGFCPDGPKCVNRHVRKIM 150
Query: 1998 CPTFKATGSCALGAKCRLHHPKSRSNGKKSR 2028
CP + TG C GA+C HP+ +K R
Sbjct: 151 CPLW-LTGFCPKGAECDFSHPRFEGISEKFR 180
>gi|156054094|ref|XP_001592973.1| hypothetical protein SS1G_05895 [Sclerotinia sclerotiorum 1980]
gi|154703675|gb|EDO03414.1| hypothetical protein SS1G_05895 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 310
Score = 70.9 bits (172), Expect = 7e-09, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 6/108 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKN-CPYRHVHVNPNASTCE 1977
VC +L+GLC + C+ H+ +MP+C++F++ G C+N + C Y HV C
Sbjct: 137 VCKHWLRGLCKKGETCEFLHEFNLRKMPECNFFVKNGYCSNGDECLYLHVDPASKVGNCP 196
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPKSRSN 2023
+ KG+C G C KKH +C F G C G+KC+ HP+ S+
Sbjct: 197 HYDKGFCPLGPRCSKKHIRKAIC-EFYLAGFCPDGSKCKKAHPRWPSD 243
>gi|226480092|emb|CAX73342.1| Cleavage and polyadenylation specificity factor subunit 4
[Schistosoma japonicum]
Length = 307
Score = 70.9 bits (172), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF +C N CP H + VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CRFFI-INQCPLSN-LCPLRHIKADRTVVCKHWLRGLCKKGDDCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCA 2008
F + G C NK CP+ H+ C + +G+C +G CR +H C + G C
Sbjct: 99 FSKFGECMNKECPFLHIDPASKVQDCPWYDRGFCRNGPLCRNRHVRRVACKNY-VNGFCP 157
Query: 2009 LGAKCRLHHP 2018
G +C+ HP
Sbjct: 158 KGRECKYAHP 167
Score = 43.9 bits (102), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 46/108 (42%), Gaps = 34/108 (31%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DP-SKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSY 1951
C FF++FG+C N +CP++H DP SK+ C + +G C N
Sbjct: 96 CYFFSKFGECM--NKECPFLHIDPASKVQDCPWYDRGFCRNGP----------------- 136
Query: 1952 FLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCP 1999
LC N RHV C+ ++ G+C G EC+ H P
Sbjct: 137 ----LCRN-----RHV----RRVACKNYVNGFCPKGRECKYAHPTWWP 171
>gi|366988641|ref|XP_003674087.1| hypothetical protein NCAS_0A11480 [Naumovozyma castellii CBS 4309]
gi|342299950|emb|CCC67706.1| hypothetical protein NCAS_0A11480 [Naumovozyma castellii CBS 4309]
Length = 215
Score = 70.9 bits (172), Expect = 8e-09, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 60/117 (51%), Gaps = 11/117 (9%)
Query: 1910 CPYIHD----PSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTN-KNC 1962
CP H+ +KI VC +L+GLC +D C+ H+ +MP+C +F + G CT C
Sbjct: 53 CPMKHNLGIFQNKI-VCKHWLRGLCKKNDQCEFLHEYNLRKMPECVFFSKNGYCTQGAEC 111
Query: 1963 PYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHH 2017
PY H+ CE + G+C G EC++KH +C + G C LG +C H
Sbjct: 112 PYLHIDPQSKIPNCEDYDLGFCPLGQECKRKHIKKTLCQRY-INGFCPLGPECEQTH 167
>gi|393912462|gb|EJD76750.1| hypothetical protein LOAG_16416 [Loa loa]
Length = 559
Score = 70.9 bits (172), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 1884 RLRLARKRKY------CQFFTRFGKCNKDNGKCPYIHDPSK----IAVCTKFLKGLCSNS 1933
RLR + + Y C F G C CP+ HD +C K + GLC
Sbjct: 389 RLRRIKDKLYTEASHECFEFAEHGHCLA-GAFCPFDHDGDSAHRTTKICIKLMTGLCRGR 447
Query: 1934 DCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKK 1993
C TH + +MP C YFL+ C++++CPY HV + CE F +G C C
Sbjct: 448 -CGQTHCLSSHQMPICDYFLRLTCSDEHCPYLHVKHAAGSKPCEDFNRGICKKSSSCSFP 506
Query: 1994 HSY 1996
H Y
Sbjct: 507 HRY 509
>gi|156062598|ref|XP_001597221.1| hypothetical protein SS1G_01415 [Sclerotinia sclerotiorum 1980]
gi|154696751|gb|EDN96489.1| hypothetical protein SS1G_01415 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 402
Score = 70.5 bits (171), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 1945 RMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKA 2003
R P+C +F +G C+N +C Y HV V+P A C F + GYC G C ++H + CP F
Sbjct: 261 RTPNCLHFAKGNCSNPDCRYTHVRVSPTALVCHSFGIYGYCDKGITCTERHIHECPDFSN 320
Query: 2004 TGSCALGAKCRLHH 2017
TG+C C+L H
Sbjct: 321 TGTCTTKG-CKLPH 333
>gi|443897962|dbj|GAC75300.1| polyadenylation factor I complex, subunit, Yth1 [Pseudozyma
antarctica T-34]
Length = 348
Score = 70.1 bits (170), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/130 (35%), Positives = 63/130 (48%), Gaps = 7/130 (5%)
Query: 1913 IHDPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLC-TNKNCPYRHVHV 1969
+ DP+K VC +L+GLC + C H+ R+P+C ++ G C + +C Y HV
Sbjct: 104 LRDPNKRTVCKHWLRGLCKKGEQCDYLHEYDMRRIPECRFYATFGFCNSGDDCLYLHVDP 163
Query: 1970 NPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPKSRSNGKKS 2027
CE + +G+C G C KKH CP + A G C GA+C H KS S
Sbjct: 164 AIKRRECERYNRGFCPKGPLCPKKHIRRIACPLYLA-GFCPQGAECPRGHIKSMPPSTSS 222
Query: 2028 RRSRKPKNTH 2037
RS P TH
Sbjct: 223 -RSNSPILTH 231
>gi|358054281|dbj|GAA99207.1| hypothetical protein E5Q_05900 [Mixia osmundae IAM 14324]
Length = 310
Score = 70.1 bits (170), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 7/123 (5%)
Query: 1921 VCTKFLKGLCSNS-DCKLTHKVIPERMPDCSYFLQ-GLC-TNKNCPYRHVHVNPNASTCE 1977
+C +LKGLC C+ H++ +MP+C +F Q C + +C Y H+ CE
Sbjct: 102 ICKHWLKGLCKKGPGCEFLHELNMRKMPECWFFTQFRFCASGDDCMYLHLVEAERLKDCE 161
Query: 1978 GFLKGYCADGDECRKKHS--YVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRS-RKPK 2034
+ +G+C G C KHS CP++ G C LGA C L HP + ++R + ++PK
Sbjct: 162 AYTRGFCHLGPSCPDKHSRKTACPSY-LNGFCPLGAHCSLVHPPWLRDQVQARVNYKEPK 220
Query: 2035 NTH 2037
+ +
Sbjct: 221 DAY 223
>gi|16740610|gb|AAH16190.1| Cleavage and polyadenylation specific factor 4-like [Mus musculus]
Length = 176
Score = 70.1 bits (170), Expect = 1e-08, Method: Composition-based stats.
Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 7/132 (5%)
Query: 1910 CPYIHDP-SKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRH 1966
CP H+ K+ VC +L+GLC SD C H+ +MP C + + G C+NK C + H
Sbjct: 3 CPLRHEQGEKLVVCKHWLRGLCRKSDCCDFLHQYDVSKMPVCYFHSKFGNCSNKECLFLH 62
Query: 1967 VHVNPNASTCEGFLKGYCAD-GDECRKKHSY--VCPTFKATGSCALGAKCRLHHPKSRSN 2023
+ C + +G+C + G C+ +H + +CP + TG C G +C+ HPK
Sbjct: 63 LKPVLKLQDCPWYNQGFCKEVGPLCKYRHVHQVLCPNY-FTGFCPEGPQCQFGHPKMSPP 121
Query: 2024 GKKSRRSRKPKN 2035
S +P N
Sbjct: 122 FHPSNVKLQPVN 133
Score = 62.4 bits (150), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/115 (33%), Positives = 57/115 (49%), Gaps = 15/115 (13%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH--DPSKIAVC---TKFLKGLCSNSDCKLTHKVIPERMPD 1948
C+ + R G C K + C ++H D SK+ VC +KF G CSN +C H ++ D
Sbjct: 16 CKHWLR-GLCRKSDC-CDFLHQYDVSKMPVCYFHSKF--GNCSNKECLFLHLKPVLKLQD 71
Query: 1949 CSYFLQGLCTNKN--CPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTF 2001
C ++ QG C C YRHVH C + G+C +G +C+ H + P F
Sbjct: 72 CPWYNQGFCKEVGPLCKYRHVH----QVLCPNYFTGFCPEGPQCQFGHPKMSPPF 122
>gi|156849163|ref|XP_001647462.1| hypothetical protein Kpol_1018p142 [Vanderwaltozyma polyspora DSM
70294]
gi|156118148|gb|EDO19604.1| hypothetical protein Kpol_1018p142 [Vanderwaltozyma polyspora DSM
70294]
Length = 207
Score = 70.1 bits (170), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 1921 VCTKFLKGLCS-NSDCKLTHKVIPERMPDCSYFLQ-GLCTNK-NCPYRHVHVNPNASTCE 1977
VC +L+GLC N +C+ H+ +MP+C +F + G CT C Y H+ C
Sbjct: 65 VCKHWLRGLCKKNDNCEYLHEYNLRKMPECVFFSKNGFCTQTPECQYLHIDPLTRIEKCS 124
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPKS 2020
+ GYC G C K+H +CP + TG C LG C + HP +
Sbjct: 125 NYETGYCPLGPACTKRHISKNICPRY-LTGFCPLGKSCDMAHPTA 168
>gi|403213908|emb|CCK68410.1| hypothetical protein KNAG_0A07570 [Kazachstania naganishii CBS 8797]
Length = 215
Score = 68.9 bits (167), Expect = 3e-08, Method: Composition-based stats.
Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 10/118 (8%)
Query: 1910 CPYIH---DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNK-NCP 1963
CP H + S VC +L+GLC +D C+ H+ RMP+C YF + G CT +C
Sbjct: 52 CPMKHILPNFSNKIVCKHWLRGLCKKNDQCEYLHEYNLRRMPECVYFAKNGYCTQSPDCQ 111
Query: 1964 YRHVHVNPNASTCEGFLKGYCADGDECRKKH---SYVCPTFKATGSCALGAKCRLHHP 2018
Y HV CE + G+C++G +C+ +H + +C + G C +G +C HP
Sbjct: 112 YLHVDPQSRIPRCEYYDLGFCSEGAQCKNRHVKKNGICQRY-LNGFCPVGRECSDEHP 168
>gi|326437098|gb|EGD82668.1| mRNA 3'-end-processing protein yth1 [Salpingoeca sp. ATCC 50818]
Length = 398
Score = 68.6 bits (166), Expect = 4e-08, Method: Composition-based stats.
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 9/132 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+ F + G C + + CP+ H P++ VC ++ GLC D C H +MP+C +
Sbjct: 41 CKAFLQ-GTCTRGS-LCPFRHTKPTRNVVCKHWINGLCRKGDNCDFLHIYDLSKMPECHF 98
Query: 1952 FLQ-GLCTN-KNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSC 2007
F G C K+C + H+ C + +G+C +G CR +H + +CP + G C
Sbjct: 99 FRNDGHCEKGKDCLFLHITPEQRRRDCAWYWRGFCKNGANCRLRHRKAVLCPNY-LVGFC 157
Query: 2008 ALGAKCRLHHPK 2019
G C+ HP+
Sbjct: 158 PKGPDCQHMHPR 169
>gi|344303110|gb|EGW33384.1| hypothetical protein SPAPADRAFT_55266 [Spathaspora passalidarum NRRL
Y-27907]
Length = 216
Score = 68.6 bits (166), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 55/104 (52%), Gaps = 6/104 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCE 1977
VC +L+GLC SD C+ H+ +MP+C +F + G CT C Y H+ + C
Sbjct: 68 VCKHWLRGLCKKSDHCEFLHEYNLRKMPECLFFSKNGFCTQTPECLYLHIDPSSKIPECL 127
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPK 2019
+ KG+C DG C+ +H +CP F A G C G +C HPK
Sbjct: 128 NYNKGFCPDGPNCKNRHVRRILCPLFLA-GFCPKGFECEYTHPK 170
>gi|365982091|ref|XP_003667879.1| hypothetical protein NDAI_0A04800 [Naumovozyma dairenensis CBS 421]
gi|343766645|emb|CCD22636.1| hypothetical protein NDAI_0A04800 [Naumovozyma dairenensis CBS 421]
Length = 215
Score = 68.6 bits (166), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 6/108 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNK-NCPYRHVHVNPNASTCE 1977
VC +L+GLC +D C+ H+ +MP+C ++ + G CT C Y H+ CE
Sbjct: 66 VCKHWLRGLCKKNDQCEYLHEYNLRKMPECVFYSKNGYCTQTPECQYLHIDPMSKIPRCE 125
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPKSRSN 2023
+ G+C+ GD C ++H +C + G C LG +C + HPK N
Sbjct: 126 DYDVGFCSLGDGCPRRHIKKIICQRY-LNGFCPLGPECDMSHPKFNIN 172
>gi|50310851|ref|XP_455448.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74605283|sp|Q6CKU1.1|YTH1_KLULA RecName: Full=mRNA 3'-end-processing protein YTH1
gi|49644584|emb|CAG98156.1| KLLA0F08129p [Kluyveromyces lactis]
Length = 210
Score = 68.2 bits (165), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 1891 RKYCQFF-TRFGKCNKDNG-KCPYIH----DPSKIAVCTKFLKGLCSNSD-CKLTHKVIP 1943
R CQ++ +R G + NG +CP H +KI VC +L+GLC +D C+ H+
Sbjct: 31 RPVCQYYNSREGIKSCPNGARCPNKHVLPIFQNKI-VCKHWLRGLCKKNDQCEYLHEYNL 89
Query: 1944 ERMPDCSYFLQ-GLCTNK-NCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCP 1999
+MP+C +F + G CT C Y HV CE + G+C G C KKH +CP
Sbjct: 90 RKMPECVFFTKNGYCTQSPECQYLHVDHKSQLEECEDYNMGFCPSGPACTKKHVKKVLCP 149
Query: 2000 TFKATGSCALGAKCRLHHPKSRSNGKKSR 2028
+ G C LG C HPK + + S+
Sbjct: 150 RY-LVGFCPLGKDCDWSHPKFKVPSEHSK 177
>gi|149054709|gb|EDM06526.1| similar to hypothetical protein D11Ertd636e (predicted), isoform
CRA_c [Rattus norvegicus]
Length = 160
Score = 68.2 bits (165), Expect = 5e-08, Method: Composition-based stats.
Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDP-SKIAVCTKFLKGLCSNSDC-KLTHKVIPERMPDCSY 1951
C FF + G C K CP H+ K+ VC +L+GLC SDC H+ RMP C +
Sbjct: 41 CNFFAK-GLCVK-GMLCPLRHEQGEKMVVCKHWLRGLCRKSDCCNFLHQYDVSRMPVCYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECR 1991
+ G C NK CP+ H+ P C + +G+C +G+ R
Sbjct: 99 HSKFGNCNNKECPFLHLKPVPKLQDCPWYDQGFCKEGEGLR 139
>gi|255713162|ref|XP_002552863.1| KLTH0D03146p [Lachancea thermotolerans]
gi|238934243|emb|CAR22425.1| KLTH0D03146p [Lachancea thermotolerans CBS 6340]
Length = 445
Score = 68.2 bits (165), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 71/171 (41%), Gaps = 29/171 (16%)
Query: 1873 SEKVRWSLHTARL-----RLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLK 1927
S K +WS ++ R+ L YC+FF++ G C N C ++HDP IA C FL
Sbjct: 175 SHKYQWSKNSYRICATAKNLGSYATYCKFFSKLGICT--NANCKFVHDPRNIAACKDFLA 232
Query: 1928 --GLCSNSDCKLTHKVIPERM-PDCSYFLQGLCTNKN----------------CPYRH-V 1967
S C+L+HK+ E + P C F Q C + C Y H
Sbjct: 233 SDNCKYGSKCRLSHKLGNEYVTPHCKDFAQRSCKFERGAEQWTQSREQDSAVCCRYIHST 292
Query: 1968 HVNPNASTCEGFLK-GYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
VN + C F G+C G C+ H CP T +C L C+ H
Sbjct: 293 IVNSSYPVCRQFAHMGFCYRGLHCKFPHYLECPDSNYTSTCFLN-HCKFPH 342
>gi|154321443|ref|XP_001560037.1| hypothetical protein BC1G_01596 [Botryotinia fuckeliana B05.10]
Length = 260
Score = 68.2 bits (165), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 6/108 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKN-CPYRHVHVNPNASTCE 1977
VC +L+GLC + C+ H+ +MP+C++F++ G C+N + C Y HV C
Sbjct: 87 VCKHWLRGLCKKGETCEFLHEFNLRKMPECNFFVKNGYCSNGDECLYLHVDPASKMGNCP 146
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPKSRSN 2023
+ KG+C G C KKH +C F G C G KC+ HP+ S+
Sbjct: 147 HYDKGFCPLGPRCSKKHIRKALC-EFYLAGFCPDGPKCKKAHPRWPSD 193
>gi|339245011|ref|XP_003378431.1| cleavage and polyadenylation specificity factor protein subunit 4
[Trichinella spiralis]
gi|316972658|gb|EFV56324.1| cleavage and polyadenylation specificity factor protein subunit 4
[Trichinella spiralis]
Length = 310
Score = 68.2 bits (165), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 63/130 (48%), Gaps = 8/130 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C FF R C + CP H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 54 CTFF-RVSTC-RLGTLCPLRHVSGDKSIVCKHWLRGLCKKGDQCEFLHEYDVSKMPECFF 111
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCA 2008
+ + C+NK CP+RH+ C + +G+C G C+ +H +C +F G C
Sbjct: 112 YSKYNACSNKECPFRHIDPESKLKDCPWYDRGFCRHGPHCKNRHRRRVMCLSF-LNGFCP 170
Query: 2009 LGAKCRLHHP 2018
G KC HP
Sbjct: 171 DGPKCLRSHP 180
>gi|156839262|ref|XP_001643324.1| hypothetical protein Kpol_463p16 [Vanderwaltozyma polyspora DSM
70294]
gi|156113929|gb|EDO15466.1| hypothetical protein Kpol_463p16 [Vanderwaltozyma polyspora DSM
70294]
Length = 765
Score = 68.2 bits (165), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 75/177 (42%), Gaps = 29/177 (16%)
Query: 1867 RARVLASEKVRWSLHTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTK-F 1925
+ RV +VR L + + + C F ++G+C N C HD IA+C + +
Sbjct: 490 KTRVYELVRVRHDLISNYIAV------CPNFVKYGQCF--NNHCKLDHDDQVIALCRRNY 541
Query: 1926 LKGLCSNSDCKLTH--KVIPERMPDCSYFLQGLCTNK-----------NCPYRHV-HVNP 1971
C ++ C + H K P +PDC +L G C +K +C Y H VNP
Sbjct: 542 STRTCGDTQCLMNHNLKFNPYIVPDCMKYLTGTCKHKYGYENYHRNGDSCIYIHSKEVNP 601
Query: 1972 N----ASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSN 2023
C F + G+CA G C KH CP FK C L +C H S S+
Sbjct: 602 YREYPYPVCRQFAILGFCARGIHCLFKHLKDCPDFKVGAPC-LIPRCNYIHKGSPSD 657
>gi|118357435|ref|XP_001011967.1| hypothetical protein TTHERM_00395950 [Tetrahymena thermophila]
gi|89293734|gb|EAR91722.1| hypothetical protein TTHERM_00395950 [Tetrahymena thermophila SB210]
Length = 228
Score = 67.8 bits (164), Expect = 6e-08, Method: Composition-based stats.
Identities = 46/130 (35%), Positives = 64/130 (49%), Gaps = 16/130 (12%)
Query: 1901 GKCNKDNGKCPYIHDPSKIAVCTKFLKGL-CSNSD-CKLTHKVIPERMPD---CSYFLQG 1955
G+C + +CPY HD SKI CTKF + C D C +HK P + C +FLQG
Sbjct: 34 GQCQR--AQCPYSHDDSKIKRCTKFQQNSHCKFGDQCDFSHKADPNKSQQQQICGHFLQG 91
Query: 1956 LCT-NKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSY--VCPTFKATGSCALGAK 2012
C +C +HV++ C F +G+C G +C+ H +C + G C G K
Sbjct: 92 QCRFGDSCQNKHVYLR-----CVSFDQGFCPQGPDCQFVHVTLKLCKDY-VYGYCPKGNK 145
Query: 2013 CRLHHPKSRS 2022
C HPK+ S
Sbjct: 146 CDKAHPKAFS 155
>gi|71022693|ref|XP_761576.1| hypothetical protein UM05429.1 [Ustilago maydis 521]
gi|74699712|sp|Q4P384.1|YTH1_USTMA RecName: Full=mRNA 3'-end-processing protein YTH1
gi|46101254|gb|EAK86487.1| hypothetical protein UM05429.1 [Ustilago maydis 521]
Length = 366
Score = 67.8 bits (164), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 62/130 (47%), Gaps = 7/130 (5%)
Query: 1913 IHDPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLC-TNKNCPYRHVHV 1969
+ DP+K VC +L+GLC D C H+ R+P+C ++ G C + +C Y HV
Sbjct: 101 LRDPNKRTVCKHWLRGLCKKDDQCDYLHEYDMRRIPECRFYATFGFCNSGDDCLYLHVDP 160
Query: 1970 NPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPKSRSNGKKS 2027
CE + +G+C G C KKH CP + A G C G C H KS + +
Sbjct: 161 AIKRRECERYNRGFCPKGPLCTKKHVRRVACPLYLA-GFCPEGLDCPRGHVKS-TPASSA 218
Query: 2028 RRSRKPKNTH 2037
RS P TH
Sbjct: 219 SRSNSPIQTH 228
>gi|367006911|ref|XP_003688186.1| hypothetical protein TPHA_0M01770 [Tetrapisispora phaffii CBS 4417]
gi|357526493|emb|CCE65752.1| hypothetical protein TPHA_0M01770 [Tetrapisispora phaffii CBS 4417]
Length = 210
Score = 67.8 bits (164), Expect = 7e-08, Method: Composition-based stats.
Identities = 38/103 (36%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 1921 VCTKFLKGLCS-NSDCKLTHKVIPERMPDCSYFLQ-GLCTNK-NCPYRHVHVNPNASTCE 1977
VC +L+GLC N +C+ H+ +MP+C +F + G CT C Y H+ CE
Sbjct: 65 VCKHWLRGLCKKNDNCEYLHEYNLRKMPECVFFSKNGFCTQTPECQYLHIDPLNKIPKCE 124
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHP 2018
+ GYCA G C K+H +C + TG C LG C HP
Sbjct: 125 DYELGYCAQGPNCNKRHISKTLCQRY-LTGFCPLGKGCDSAHP 166
>gi|410079256|ref|XP_003957209.1| hypothetical protein KAFR_0D04260 [Kazachstania africana CBS 2517]
gi|372463794|emb|CCF58074.1| hypothetical protein KAFR_0D04260 [Kazachstania africana CBS 2517]
Length = 215
Score = 67.8 bits (164), Expect = 8e-08, Method: Composition-based stats.
Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNK-NCPYRHVHVNPNASTCE 1977
VC +L+GLC +D C+ H+ +MP+C ++ + G CT C Y HV CE
Sbjct: 66 VCKHWLRGLCKKNDQCEFLHEYNLRKMPECVFYAKNGYCTQTPECQYLHVDPISKIPRCE 125
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGA-KCRLHHPK 2019
+ +G+C DG C+K+H VC + G C LG C HP+
Sbjct: 126 AYDQGFCFDGPNCKKRHVKKLVCQRY-LNGFCPLGRDNCEFEHPQ 169
>gi|367018548|ref|XP_003658559.1| hypothetical protein MYCTH_16224, partial [Myceliophthora thermophila
ATCC 42464]
gi|347005826|gb|AEO53314.1| hypothetical protein MYCTH_16224, partial [Myceliophthora thermophila
ATCC 42464]
Length = 253
Score = 67.8 bits (164), Expect = 8e-08, Method: Composition-based stats.
Identities = 39/110 (35%), Positives = 61/110 (55%), Gaps = 7/110 (6%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKN-CPYRHVHVNPNASTCE 1977
VC +L+GLC + C+ H+ +MP+C++F++ G C+N + C Y H+ + C
Sbjct: 81 VCKHWLRGLCKKGEACEFLHEYNLRKMPECNFFVRNGYCSNGDECLYLHIDPSSRLPPCP 140
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRL-HHPKSRSNG 2024
+ +G+C G C KKH +CP + A G C G CRL HPK ++G
Sbjct: 141 HYERGFCPLGPRCDKKHVRRRMCPYYLA-GFCPDGRACRLGAHPKWVADG 189
>gi|260951253|ref|XP_002619923.1| hypothetical protein CLUG_01082 [Clavispora lusitaniae ATCC 42720]
gi|238847495|gb|EEQ36959.1| hypothetical protein CLUG_01082 [Clavispora lusitaniae ATCC 42720]
Length = 149
Score = 67.4 bits (163), Expect = 9e-08, Method: Composition-based stats.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 6/104 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNK-NCPYRHVHVNPNASTCE 1977
VC +L+GLC +D C+ H+ +MP+C ++ + G CT C Y H+ C
Sbjct: 7 VCKHWLRGLCKKNDHCEFLHEYNLRKMPECLFYSKNGYCTQTPECLYLHIDPQQKIPECS 66
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPK 2019
+ KG+C +G +C +H +CP + TG C G C HPK
Sbjct: 67 QYEKGFCPEGPKCPNRHIRKIMCPLY-LTGFCPKGPDCDYSHPK 109
>gi|388856586|emb|CCF49892.1| related to cleavage and polyadenylation specificity factor [Ustilago
hordei]
Length = 405
Score = 67.4 bits (163), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 55/112 (49%), Gaps = 6/112 (5%)
Query: 1913 IHDPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLC-TNKNCPYRHVHV 1969
+ D +K VC +L+GLC D C H+ R+P+C ++ G C + +C Y HVH
Sbjct: 101 LRDANKRTVCKHWLRGLCKKGDQCDYLHEYDMRRIPECRFYATFGFCNSGDDCLYLHVHP 160
Query: 1970 NPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPK 2019
CE + +G+C G C KKH CP + A G C G +C H K
Sbjct: 161 AIKRRECEKYNRGFCPKGPNCPKKHIRRVACPLYLA-GFCPQGLECPRGHIK 211
>gi|343426681|emb|CBQ70210.1| related to Cleavage and polyadenylation specificity factor
[Sporisorium reilianum SRZ2]
Length = 377
Score = 67.0 bits (162), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 62/130 (47%), Gaps = 7/130 (5%)
Query: 1913 IHDPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLC-TNKNCPYRHVHV 1969
+ DP+K VC +L+GLC D C H+ R+P+C ++ G C + +C Y HV
Sbjct: 101 LRDPNKRTVCKHWLRGLCKKGDQCDYLHEYDMRRIPECRFYATFGFCNSGDDCLYLHVDP 160
Query: 1970 NPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPKSRSNGKKS 2027
CE + +G+C G C KKH CP + A G C G +C H KS S
Sbjct: 161 AIKRRECEKYNRGFCPKGPLCTKKHIRRVACPLYLA-GFCPQGLECPRGHIKSTPPSSAS 219
Query: 2028 RRSRKPKNTH 2037
RS P TH
Sbjct: 220 -RSNSPILTH 228
>gi|21536232|ref|NP_084070.1| cleavage and polyadenylation specific factor 4-like isoform 2 [Mus
musculus]
gi|12836748|dbj|BAB23796.1| unnamed protein product [Mus musculus]
Length = 190
Score = 66.6 bits (161), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 59/114 (51%), Gaps = 7/114 (6%)
Query: 1910 CPYIHDP-SKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRH 1966
CP H+ K+ VC +L+GLC SD C H+ +MP C + + G C+NK C + H
Sbjct: 3 CPLRHEQGEKLVVCKHWLRGLCRKSDCCDFLHQYDVSKMPVCYFHSKFGNCSNKECLFLH 62
Query: 1967 VHVNPNASTCEGFLKGYCAD-GDECRKKHSY--VCPTFKATGSCALGAKCRLHH 2017
+ C + +G+C + G C+ +H + +CP + TG C G +C+ H
Sbjct: 63 LKPVLKLQDCPWYNQGFCKEVGPLCKYRHVHQVLCPNY-FTGFCPEGPQCQFGH 115
Score = 60.1 bits (144), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 54/108 (50%), Gaps = 15/108 (13%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH--DPSKIAVC---TKFLKGLCSNSDCKLTHKVIPERMPD 1948
C+ + R G C K + C ++H D SK+ VC +KF G CSN +C H ++ D
Sbjct: 16 CKHWLR-GLCRKSDC-CDFLHQYDVSKMPVCYFHSKF--GNCSNKECLFLHLKPVLKLQD 71
Query: 1949 CSYFLQGLCTNKN--CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ QG C C YRHVH C + G+C +G +C+ H
Sbjct: 72 CPWYNQGFCKEVGPLCKYRHVH----QVLCPNYFTGFCPEGPQCQFGH 115
>gi|396472497|ref|XP_003839131.1| hypothetical protein LEMA_P028040.1 [Leptosphaeria maculans JN3]
gi|312215700|emb|CBX95652.1| hypothetical protein LEMA_P028040.1 [Leptosphaeria maculans JN3]
Length = 254
Score = 66.6 bits (161), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/153 (31%), Positives = 72/153 (47%), Gaps = 13/153 (8%)
Query: 1884 RLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKI---AVCTKFLKGLCSNSD-CKLTH 1939
R L R C+ F + G C D +CP H + VC +L+GLC D C+ H
Sbjct: 38 RFGLNPDRPTCKAFMQ-GHC-PDGNRCPNKHHVTSSYNNLVCKHWLRGLCKKGDTCEFLH 95
Query: 1940 KVIPERMPDCSYFLQG-LCTN-KNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS-- 1995
+ RMP+CSY+ + C+N +C Y H+ C + +G+C G C KH+
Sbjct: 96 EYNLRRMPECSYYARTQTCSNGDDCLYLHIDPEAKRPACPHYDRGFCPLGPHCALKHNKK 155
Query: 1996 -YVCPTFKATGSCALGAKCRL-HHPKSRSNGKK 2026
+CP + G C G C+ HP+ ++ KK
Sbjct: 156 DKLCPYY-LCGFCPEGKGCKYGAHPRYPTDLKK 187
>gi|330934206|ref|XP_003304457.1| hypothetical protein PTT_17055 [Pyrenophora teres f. teres 0-1]
gi|311318917|gb|EFQ87453.1| hypothetical protein PTT_17055 [Pyrenophora teres f. teres 0-1]
Length = 256
Score = 66.2 bits (160), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/153 (30%), Positives = 74/153 (48%), Gaps = 13/153 (8%)
Query: 1884 RLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKI---AVCTKFLKGLCSNSD-CKLTH 1939
R L R C+ + + G C D +CP H+ + VC +L+GLC + C+ H
Sbjct: 38 RFGLNPDRPTCKAYLQ-GHC-PDGNRCPNKHNVTSSYNNLVCKHWLRGLCKKGETCEFLH 95
Query: 1940 KVIPERMPDCSYFLQG-LCTN-KNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS-- 1995
+ RMP+CSY+ + C+N +C Y H+ +C + +G+C G C KH+
Sbjct: 96 EYNLRRMPECSYYARTQTCSNGDDCLYLHIDPEAKRPSCPHYDRGFCPLGPHCSLKHNKK 155
Query: 1996 -YVCPTFKATGSCALGAKCRL-HHPKSRSNGKK 2026
+CP F G C G C+ HP+ ++ KK
Sbjct: 156 DKLCP-FYLCGFCPEGKGCKYGAHPRYPTDLKK 187
>gi|344243027|gb|EGV99130.1| Cleavage and polyadenylation specificity factor subunit 4 [Cricetulus
griseus]
Length = 274
Score = 66.2 bits (160), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVC 1998
+ + G C+NK CP+ H+ C + +G+C C K C
Sbjct: 99 YSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHVSPCVLKFGLFC 146
>gi|242804168|ref|XP_002484320.1| high-affinity glucose transporter, putative [Talaromyces stipitatus
ATCC 10500]
gi|218717665|gb|EED17086.1| high-affinity glucose transporter, putative [Talaromyces stipitatus
ATCC 10500]
Length = 805
Score = 65.5 bits (158), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 55/106 (51%), Gaps = 9/106 (8%)
Query: 1921 VCTKFLKGLCSNS-DCKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCE 1977
VC FLKGLC C+ H+ RMP+C+ F + G C N ++C Y HV N CE
Sbjct: 641 VCKHFLKGLCKKGFKCEYLHEYNLRRMPECASFSRSGYCPNGEDCLYHHVRENARLPRCE 700
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLH--HPK 2019
+ +G+C G C K+H +CP F G C G C+ H HP+
Sbjct: 701 HYDRGFCPLGPICAKQHVRQSLCP-FYLAGFCPDGKNCQ-HGAHPR 744
Score = 42.0 bits (97), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 41/107 (38%), Gaps = 26/107 (24%)
Query: 1946 MPDCSYFLQGLC-TNKNCPYRH------VHVNPNAS-----------TCEGFLKGYCADG 1987
+P C F +G C CP RH + NAS C+ FLKG C G
Sbjct: 594 VPVCKAFKEGHCPLGPTCPDRHPTPSRVTTSSTNASGLAPSVTHGSLVCKHFLKGLCKKG 653
Query: 1988 DECRKKHSY------VCPTFKATGSCALGAKCRLHHPKSRSNGKKSR 2028
+C H Y C +F +G C G C HH R N + R
Sbjct: 654 FKCEYLHEYNLRRMPECASFSRSGYCPNGEDCLYHH--VRENARLPR 698
>gi|123478691|ref|XP_001322507.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121905354|gb|EAY10284.1| hypothetical protein TVAG_047060 [Trichomonas vaginalis G3]
Length = 166
Score = 65.5 bits (158), Expect = 3e-07, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 1904 NKDNGKCPYIHDPSKI-------AVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ- 1954
N++N YI+ SK VC K++ C + D C+ H+ +RM C ++ +
Sbjct: 28 NEENDLKDYINKLSKKDRNSFHQVVCDKWVNTHCVHGDRCQSLHEYDIDRMKKCQFWEKY 87
Query: 1955 GLCTNK-NCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS---YVCPTFKATGSCALG 2010
C+NK C +RH + + C+ +++GYC GD+C++KH+ VC + A G C G
Sbjct: 88 HECSNKFECIFRHELTDRIGTDCQYYIRGYCKHGDKCKRKHTPRDAVCLNYLA-GFCPDG 146
Query: 2011 AKCRLHHPK 2019
KC HPK
Sbjct: 147 PKCLFAHPK 155
>gi|300706691|ref|XP_002995591.1| hypothetical protein NCER_101464 [Nosema ceranae BRL01]
gi|239604757|gb|EEQ81920.1| hypothetical protein NCER_101464 [Nosema ceranae BRL01]
Length = 159
Score = 65.5 bits (158), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 7/108 (6%)
Query: 1917 SKIAVCTKFLKGLCSN-SDCKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRHVHVNPNAS 1974
S +C +L+GLC C+ H+ ++MP C +F + G CTN C Y H V
Sbjct: 49 STAVICKHWLRGLCKKGKKCEFIHEYDLKKMPQCYFFSKLGECTNPECFYLHSVVK--RK 106
Query: 1975 TCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPKS 2020
C + +G+C G +C+ +H +C + G C G C HPKS
Sbjct: 107 ECAWYNRGFCRHGSQCKNRHVRKKMCYNY-YLGFCIKGPTCEYGHPKS 153
Score = 41.6 bits (96), Expect = 5.6, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Query: 1889 RKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSN-SDCKLTHKVIPERMP 1947
+K C FF++ G+C N +C Y+H K C + +G C + S CK H + ++M
Sbjct: 77 KKMPQCYFFSKLGECT--NPECFYLHSVVKRKECAWYNRGFCRHGSQCKNRH--VRKKM- 131
Query: 1948 DCSYFLQGLCTN-KNCPYRH 1966
C + G C C Y H
Sbjct: 132 -CYNYYLGFCIKGPTCEYGH 150
>gi|428175385|gb|EKX44275.1| hypothetical protein GUITHDRAFT_46950, partial [Guillardia theta
CCMP2712]
Length = 93
Score = 65.1 bits (157), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGF 1979
VC +L+ C D C+ H+ RMP C +F G CT +C + H+ C +
Sbjct: 1 VCKHWLRSQCKKGDQCEYLHQYDMTRMPLCHFFADGQCTKDDCQFLHIRPEDKVVECPWY 60
Query: 1980 LKGYCADGDECRKKHSY--VCPTFKATGSCALG 2010
+G+C G +CRKKH+ +C ++ A G C G
Sbjct: 61 ARGFCKHGPKCRKKHARKELCGSYMA-GFCPKG 92
Score = 48.5 bits (114), Expect = 0.041, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH--DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSY 1951
C+ + R +C K + +C Y+H D +++ +C F G C+ DC+ H +++ +C +
Sbjct: 2 CKHWLR-SQCKKGD-QCEYLHQYDMTRMPLCHFFADGQCTKDDCQFLHIRPEDKVVECPW 59
Query: 1952 FLQGLCTN-KNCPYRHVHVNPNASTCEGFLKGYCADG 1987
+ +G C + C +H C ++ G+C G
Sbjct: 60 YARGFCKHGPKCRKKHAR----KELCGSYMAGFCPKG 92
>gi|440300652|gb|ELP93099.1| mRNA 3'-end-processing protein YTH1, putative [Entamoeba invadens
IP1]
Length = 160
Score = 65.1 bits (157), Expect = 5e-07, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 1918 KIAVCTKFLKGLCS-NSDCKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRHVHVNPNAST 1975
K VC+ +L+G C ++C H+ ++ P C++F + G C CP+RH N+
Sbjct: 37 KTVVCSHWLRGSCKLGNNCGYLHEYDLDKTPMCNHFEKYGKCDKPECPFRH-EAPSNSPK 95
Query: 1976 CEGFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHP 2018
CE +++G+C+ G +C H +CP + G C G +C+ HP
Sbjct: 96 CEWYIRGFCSRGKKCHNLHPKKLLCPLY-FMGFCPYGKQCKYSHP 139
Score = 50.1 bits (118), Expect = 0.017, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 11/110 (10%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH--DPSKIAVCTKFLK-GLCSNSDCKLTHKVIPERMPDCS 1950
C + R G C N C Y+H D K +C F K G C +C H+ P P C
Sbjct: 41 CSHWLR-GSCKLGN-NCGYLHEYDLDKTPMCNHFEKYGKCDKPECPFRHEA-PSNSPKCE 97
Query: 1951 YFLQGLCTN-KNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCP 1999
++++G C+ K C H P C + G+C G +C+ H P
Sbjct: 98 WYIRGFCSRGKKCHNLH----PKKLLCPLYFMGFCPYGKQCKYSHPSPAP 143
>gi|400595310|gb|EJP63115.1| Zinc finger CCCH type domain containing protein [Beauveria bassiana
ARSEF 2860]
Length = 512
Score = 65.1 bits (157), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 7/120 (5%)
Query: 1921 VCTKFLKGLCSNS-DCKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCE 1977
VC +L+GLC C+ H+ RMP+C++F++ G C+N + C Y HV C
Sbjct: 328 VCKHWLRGLCKKGIPCEFLHEYNLRRMPECNFFMRNGYCSNGEECLYLHVDPLSKLPPCP 387
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRL-HHPKSRSNGKKSRRSRKPK 2034
+ G+C G C KKH +CP + A G C G +CR HPK + ++ +PK
Sbjct: 388 HYDMGFCPLGPVCAKKHVRRRLCPLYLA-GFCPEGPECRRGSHPKWSTTLERPTVKPEPK 446
>gi|195999310|ref|XP_002109523.1| hypothetical protein TRIADDRAFT_53642 [Trichoplax adhaerens]
gi|190587647|gb|EDV27689.1| hypothetical protein TRIADDRAFT_53642 [Trichoplax adhaerens]
Length = 257
Score = 64.7 bits (156), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 10/133 (7%)
Query: 1910 CPYIHDPS-KIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRH 1966
CP+ H K VC +L+GLC D C+ H+ +MP+C ++ + G C+NK C Y H
Sbjct: 55 CPFRHTKGDKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECQYLH 114
Query: 1967 VHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPK----S 2020
++ C + +G+C G CR +H C + G C G+ C+ H + +
Sbjct: 115 INPESKIKDCPWYDRGFCKHGPACRHRHVRRVACLNY-LNGFCPEGSNCKHVHLRFELPT 173
Query: 2021 RSNGKKSRRSRKP 2033
R S RKP
Sbjct: 174 REIDIHSESKRKP 186
>gi|254580849|ref|XP_002496410.1| ZYRO0C17776p [Zygosaccharomyces rouxii]
gi|238939301|emb|CAR27477.1| ZYRO0C17776p [Zygosaccharomyces rouxii]
Length = 210
Score = 64.7 bits (156), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 7/104 (6%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCE 1977
VC +L+GLC +D C+ H+ +MP+C ++ + G CT C Y H+ + CE
Sbjct: 66 VCKHWLRGLCKKNDQCEYLHEYNLRKMPECVFYSKNGYCTQTPECQYLHIDPQSKIAPCE 125
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAK-CRLHHP 2018
+ G+C G C+K+H +CP + TG C LG + C + HP
Sbjct: 126 EYTMGFCPQGPNCKKRHVKKVLCPRY-LTGFCPLGRRDCDMAHP 168
>gi|354546718|emb|CCE43450.1| hypothetical protein CPAR2_210940 [Candida parapsilosis]
Length = 220
Score = 64.3 bits (155), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 1920 AVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTC 1976
VC +L+GLC D C+ H+ +MP+C ++ + G CT C Y+H+ C
Sbjct: 69 VVCKHWLRGLCKKGDHCEFLHEYNLRKMPECLFYSKNGYCTQGSECLYQHIDPQSKIPEC 128
Query: 1977 EGFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPK 2019
+ G+CA+G C+ +H +CP + A G C G +C HPK
Sbjct: 129 MNYNAGFCAEGPNCKSRHVRRTICPYYMA-GFCPQGPECEHTHPK 172
>gi|448512977|ref|XP_003866853.1| Yth1 mRNA cleavage and polyadenylation specificity factor [Candida
orthopsilosis Co 90-125]
gi|380351191|emb|CCG21414.1| Yth1 mRNA cleavage and polyadenylation specificity factor [Candida
orthopsilosis Co 90-125]
Length = 216
Score = 64.3 bits (155), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 1917 SKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNA 1973
S VC +L+GLC D C+ H+ +MP+C ++ + G CT C Y+H+
Sbjct: 66 SNKVVCKHWLRGLCKKGDHCEFLHEYNLRKMPECLFYSKNGFCTQGSECLYQHIDPQSKI 125
Query: 1974 STCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPK 2019
C + G+CA+G C+ +H VCP + A G C G +C HPK
Sbjct: 126 PECMNYNAGFCAEGPNCKNRHVRRTVCPYYMA-GFCPKGPECEHTHPK 172
>gi|50288011|ref|XP_446434.1| hypothetical protein [Candida glabrata CBS 138]
gi|74610179|sp|Q6FTL0.1|YTH1_CANGA RecName: Full=mRNA 3'-end-processing protein YTH1
gi|49525742|emb|CAG59361.1| unnamed protein product [Candida glabrata]
Length = 209
Score = 64.3 bits (155), Expect = 8e-07, Method: Composition-based stats.
Identities = 45/140 (32%), Positives = 67/140 (47%), Gaps = 14/140 (10%)
Query: 1891 RKYCQFFT-RFGKCNKDNGK-CPYIHD----PSKIAVCTKFLKGLCS-NSDCKLTHKVIP 1943
R C+ F + G + NG CP H +KI VC +L+GLC N +C+ H+
Sbjct: 32 RPVCEDFNYKIGPSSCPNGVFCPKKHVLGIFQNKI-VCKHWLRGLCKKNDNCEYLHEYNL 90
Query: 1944 ERMPDCSYFLQ-GLCTNK-NCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCP 1999
+MP+C ++ + G CT C Y H+ CE + G+C G C K+H +C
Sbjct: 91 RKMPECVFYAKNGFCTQSPECQYLHIDPLSKVPPCEDYEMGFCPKGSACEKRHIKKVLCQ 150
Query: 2000 TFKATGSCALGAK-CRLHHP 2018
+ G C LG + C + HP
Sbjct: 151 RY-INGFCPLGRRECDMEHP 169
>gi|323350234|gb|EGA84381.1| Yth1p [Saccharomyces cerevisiae VL3]
Length = 193
Score = 63.9 bits (154), Expect = 9e-07, Method: Composition-based stats.
Identities = 46/141 (32%), Positives = 70/141 (49%), Gaps = 14/141 (9%)
Query: 1891 RKYCQFF-TRFGKCNKDNGK-CPYIHD----PSKIAVCTKFLKGLCSNSD-CKLTHKVIP 1943
R C+F+ +R G + G CP H +KI VC +L+GLC +D C+ H+
Sbjct: 31 RPICEFYNSRQGPKSCPRGPLCPKKHVLPIFQNKI-VCRHWLRGLCKKNDQCEYLHEYNL 89
Query: 1944 ERMPDCSYFLQ-GLCTNK-NCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCP 1999
+MP+C +F + G CT +C Y H+ CE + G+C G C ++H C
Sbjct: 90 RKMPECVFFSKNGYCTQSPDCQYLHIDPASKIPKCENYEMGFCPLGSSCPRRHIKKVFCQ 149
Query: 2000 TFKATGSCALGA-KCRLHHPK 2019
+ TG C LG +C + HP+
Sbjct: 150 RY-MTGFCPLGKDECDMEHPQ 169
>gi|323335176|gb|EGA76466.1| Yth1p [Saccharomyces cerevisiae Vin13]
gi|323346323|gb|EGA80613.1| Yth1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 208
Score = 63.9 bits (154), Expect = 9e-07, Method: Composition-based stats.
Identities = 46/141 (32%), Positives = 70/141 (49%), Gaps = 14/141 (9%)
Query: 1891 RKYCQFF-TRFGKCNKDNGK-CPYIHD----PSKIAVCTKFLKGLCSNSD-CKLTHKVIP 1943
R C+F+ +R G + G CP H +KI VC +L+GLC +D C+ H+
Sbjct: 31 RPICEFYNSRZGPKSCPRGPLCPKKHVLPIFQNKI-VCRHWLRGLCKKNDQCEYLHEYNL 89
Query: 1944 ERMPDCSYFLQ-GLCTNK-NCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCP 1999
+MP+C +F + G CT +C Y H+ CE + G+C G C ++H C
Sbjct: 90 RKMPECVFFSKNGYCTQSPDCQYLHIDPASKIPKCENYEMGFCPLGSSCPRRHIKKVFCQ 149
Query: 2000 TFKATGSCALGA-KCRLHHPK 2019
+ TG C LG +C + HP+
Sbjct: 150 RY-MTGFCPLGKDECDMEHPQ 169
>gi|310795354|gb|EFQ30815.1| hypothetical protein GLRG_05959 [Glomerella graminicola M1.001]
Length = 253
Score = 63.9 bits (154), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 60/112 (53%), Gaps = 7/112 (6%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCE 1977
VC +L+GLC + C+ H+ +MP+C++F++ G C+N + C Y H+ C
Sbjct: 77 VCKHWLRGLCKKGESCEFLHEYNLRKMPECNFFMRNGYCSNGEECLYLHIDPQSKLPPCP 136
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRL-HHPKSRSNGKK 2026
+ KG+C G C KKH +CP F G C G C+ HP+ R++ +K
Sbjct: 137 HYDKGFCPLGPRCSKKHVRRKLCP-FYLVGFCPEGPGCKYGAHPRWRTDLEK 187
>gi|241951540|ref|XP_002418492.1| mRNA 3'-end-processing protein, putative [Candida dubliniensis CD36]
gi|223641831|emb|CAX43793.1| mRNA 3'-end-processing protein, putative [Candida dubliniensis CD36]
Length = 216
Score = 63.9 bits (154), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 68/146 (46%), Gaps = 17/146 (11%)
Query: 1887 LARKRKYCQFFTRFGKCNKDN-----GKCPYIHDPSKIA---VCTKFLKGLCSNSD-CKL 1937
L R CQF+ N DN CP H + + VC +L+GLC D C+
Sbjct: 31 LDPDRPVCQFYNPL---NPDNSCPQGNNCPNKHVSAMYSNKIVCKHWLRGLCKKGDHCEF 87
Query: 1938 THKVIPERMPDCSYFLQ-GLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH- 1994
H+ +MP+C ++ + G CT + C Y HV C + +G+C++G C+ +H
Sbjct: 88 LHEYNLRKMPECLFYSKNGYCTQTSECLYLHVDPQSKIPECLNYNQGFCSEGPNCKNRHV 147
Query: 1995 -SYVCPTFKATGSCALGAKCRLHHPK 2019
+CP + G C G +C HPK
Sbjct: 148 RRVLCPLY-LYGFCPKGPECEFTHPK 172
>gi|170594970|ref|XP_001902195.1| zinc finger [Brugia malayi]
gi|158590259|gb|EDP28957.1| zinc finger, putative [Brugia malayi]
Length = 517
Score = 63.9 bits (154), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Query: 1910 CPYIHDPSKI----AVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYR 1965
CP+ HD +C+K + GLC CK H + +MP C YFL+ C+N++C Y
Sbjct: 378 CPFDHDGDSTHRMTKICSKLMLGLC-RGHCKQAHCLSSHQMPVCDYFLRLTCSNEHCQYL 436
Query: 1966 HVHVNPNASTCEGFLKGYCADGDECRKKHSY 1996
HV + CE F +G C C H Y
Sbjct: 437 HVKHAVGSKPCEDFNRGICKKSSGCSFPHRY 467
>gi|213402063|ref|XP_002171804.1| zinc finger protein Yth1 [Schizosaccharomyces japonicus yFS275]
gi|211999851|gb|EEB05511.1| zinc finger protein Yth1 [Schizosaccharomyces japonicus yFS275]
Length = 171
Score = 63.9 bits (154), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCE 1977
VC +L+GLC + C+ H+ ++MP C ++ + G C+N + C Y H+ + C
Sbjct: 54 VCKHWLRGLCKKGNQCEFLHEYNLKKMPPCHFYAERGWCSNGEECLYLHLDPSKQVGVCA 113
Query: 1978 GFLKGYCADGDECRKKH---SYVCPTFKATGSCALGAKCRLHHPK 2019
+ G+C G CR KH +C F A G C LG C HPK
Sbjct: 114 WYNMGFCPLGPICRGKHVRKGPICERFLA-GFCQLGPNCPHPHPK 157
>gi|68486577|ref|XP_712839.1| potential polyadenylation factor subunit [Candida albicans SC5314]
gi|68486632|ref|XP_712810.1| potential polyadenylation factor subunit [Candida albicans SC5314]
gi|74584839|sp|Q59T36.1|YTH1_CANAL RecName: Full=mRNA 3'-end-processing protein YTH1
gi|46434225|gb|EAK93641.1| potential polyadenylation factor subunit [Candida albicans SC5314]
gi|46434255|gb|EAK93670.1| potential polyadenylation factor subunit [Candida albicans SC5314]
gi|238882336|gb|EEQ45974.1| protein YTH1 [Candida albicans WO-1]
Length = 215
Score = 63.9 bits (154), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 68/146 (46%), Gaps = 17/146 (11%)
Query: 1887 LARKRKYCQFFTRFGKCNKDN-----GKCPYIHDPSKIA---VCTKFLKGLCSNSD-CKL 1937
L R CQF+ N DN CP H + + VC +L+GLC D C+
Sbjct: 31 LDPDRPVCQFYNPL---NPDNSCPQGNNCPNKHVSAMYSNKIVCKHWLRGLCKKGDHCEF 87
Query: 1938 THKVIPERMPDCSYFLQ-GLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH- 1994
H+ +MP+C ++ + G CT + C Y HV C + +G+C++G C+ +H
Sbjct: 88 LHEYNLRKMPECLFYSKNGYCTQTSECLYLHVDPQSKIPECLNYNQGFCSEGPNCKNRHV 147
Query: 1995 -SYVCPTFKATGSCALGAKCRLHHPK 2019
+CP + G C G +C HPK
Sbjct: 148 RRVLCPLY-LYGFCPKGPECEFTHPK 172
>gi|151942883|gb|EDN61229.1| polyadenylation factor subunit [Saccharomyces cerevisiae YJM789]
Length = 208
Score = 63.9 bits (154), Expect = 1e-06, Method: Composition-based stats.
Identities = 46/141 (32%), Positives = 70/141 (49%), Gaps = 14/141 (9%)
Query: 1891 RKYCQFF-TRFGKCNKDNGK-CPYIHD----PSKIAVCTKFLKGLCSNSD-CKLTHKVIP 1943
R C+F+ +R G + G CP H +KI VC +L+GLC +D C+ H+
Sbjct: 31 RPICEFYNSRQGPKSCPRGPLCPKKHVLPIFQNKI-VCRHWLRGLCKKNDQCEYLHEYNL 89
Query: 1944 ERMPDCSYFLQ-GLCTNK-NCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCP 1999
+MP+C +F + G CT +C Y H+ CE + G+C G C ++H C
Sbjct: 90 RKMPECVFFSKNGYCTQSPDCQYLHIDPATKIPKCENYEMGFCPLGSSCPRRHIKKVFCQ 149
Query: 2000 TFKATGSCALGA-KCRLHHPK 2019
+ TG C LG +C + HP+
Sbjct: 150 RY-MTGFCPLGKDECDMEHPQ 169
>gi|259150256|emb|CAY87059.1| Yth1p [Saccharomyces cerevisiae EC1118]
Length = 208
Score = 63.9 bits (154), Expect = 1e-06, Method: Composition-based stats.
Identities = 46/141 (32%), Positives = 70/141 (49%), Gaps = 14/141 (9%)
Query: 1891 RKYCQFF-TRFGKCNKDNGK-CPYIHD----PSKIAVCTKFLKGLCSNSD-CKLTHKVIP 1943
R C+F+ +R G + G CP H +KI VC +L+GLC +D C+ H+
Sbjct: 31 RPICEFYNSRQGPKSCPRGPLCPKKHVLPIFQNKI-VCRHWLRGLCKKNDQCEYLHEYNL 89
Query: 1944 ERMPDCSYFLQ-GLCTNK-NCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCP 1999
+MP+C +F + G CT +C Y H+ CE + G+C G C ++H C
Sbjct: 90 RKMPECVFFSKNGYCTQSPDCQYLHIDPASKIPKCENYEMGFCPLGSSCPRRHIKKVFCQ 149
Query: 2000 TFKATGSCALGA-KCRLHHPK 2019
+ TG C LG +C + HP+
Sbjct: 150 RY-MTGFCPLGKDECDMEHPQ 169
>gi|402224498|gb|EJU04560.1| hypothetical protein DACRYDRAFT_62698, partial [Dacryopinax sp.
DJM-731 SS1]
Length = 314
Score = 63.9 bits (154), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 7/125 (5%)
Query: 1915 DPS-KIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCT-NKNCPYRHVHVN 1970
DP + VC +L+GLC + C+ H+ +MP+C ++ + G C+ C Y H
Sbjct: 111 DPRFRTTVCKHWLRGLCKKGESCEFLHEYNLRKMPECWWYAKYGYCSAGDECLY--THPK 168
Query: 1971 PNASTCEGFLKGYCADGDECRKKHSYVCPTFK-ATGSCALGAKCRLHHPKSRSNGKKSRR 2029
C + +G+C G +C +KH+ P +G C LG +C L HPK K+
Sbjct: 169 ERKIDCPDYARGFCPLGPKCERKHARRVPCQNYLSGFCPLGKECALAHPKWELPTKEEYE 228
Query: 2030 SRKPK 2034
S++P+
Sbjct: 229 SQQPR 233
>gi|190408034|gb|EDV11299.1| protein YTH1 [Saccharomyces cerevisiae RM11-1a]
gi|207340294|gb|EDZ68688.1| YPR107Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|323331343|gb|EGA72761.1| Yth1p [Saccharomyces cerevisiae AWRI796]
Length = 208
Score = 63.9 bits (154), Expect = 1e-06, Method: Composition-based stats.
Identities = 46/141 (32%), Positives = 70/141 (49%), Gaps = 14/141 (9%)
Query: 1891 RKYCQFF-TRFGKCNKDNGK-CPYIHD----PSKIAVCTKFLKGLCSNSD-CKLTHKVIP 1943
R C+F+ +R G + G CP H +KI VC +L+GLC +D C+ H+
Sbjct: 31 RPICEFYNSRQGPKSCPRGPLCPKKHVLPIFQNKI-VCRHWLRGLCKKNDQCEYLHEYNL 89
Query: 1944 ERMPDCSYFLQ-GLCTNK-NCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCP 1999
+MP+C +F + G CT +C Y H+ CE + G+C G C ++H C
Sbjct: 90 RKMPECVFFSKNGYCTQSPDCQYLHIDPASKIPKCENYEMGFCPLGSSCPRRHIKKVFCQ 149
Query: 2000 TFKATGSCALGA-KCRLHHPK 2019
+ TG C LG +C + HP+
Sbjct: 150 RY-MTGFCPLGKDECDMEHPQ 169
>gi|6325364|ref|NP_015432.1| Yth1p [Saccharomyces cerevisiae S288c]
gi|74676379|sp|Q06102.1|YTH1_YEAST RecName: Full=mRNA 3'-end-processing protein YTH1; AltName:
Full=Yeast 30 kDa homolog 1
gi|914978|gb|AAB68077.1| Ypr107cp [Saccharomyces cerevisiae]
gi|45270012|gb|AAS56387.1| YPR107C [Saccharomyces cerevisiae]
gi|256269069|gb|EEU04406.1| Yth1p [Saccharomyces cerevisiae JAY291]
gi|285815629|tpg|DAA11521.1| TPA: Yth1p [Saccharomyces cerevisiae S288c]
gi|323302587|gb|EGA56394.1| Yth1p [Saccharomyces cerevisiae FostersB]
gi|323306840|gb|EGA60125.1| Yth1p [Saccharomyces cerevisiae FostersO]
gi|349581909|dbj|GAA27066.1| K7_Yth1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365762575|gb|EHN04109.1| Yth1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392296110|gb|EIW07213.1| Yth1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 208
Score = 63.9 bits (154), Expect = 1e-06, Method: Composition-based stats.
Identities = 46/141 (32%), Positives = 70/141 (49%), Gaps = 14/141 (9%)
Query: 1891 RKYCQFF-TRFGKCNKDNGK-CPYIHD----PSKIAVCTKFLKGLCSNSD-CKLTHKVIP 1943
R C+F+ +R G + G CP H +KI VC +L+GLC +D C+ H+
Sbjct: 31 RPICEFYNSREGPKSCPRGPLCPKKHVLPIFQNKI-VCRHWLRGLCKKNDQCEYLHEYNL 89
Query: 1944 ERMPDCSYFLQ-GLCTNK-NCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCP 1999
+MP+C +F + G CT +C Y H+ CE + G+C G C ++H C
Sbjct: 90 RKMPECVFFSKNGYCTQSPDCQYLHIDPASKIPKCENYEMGFCPLGSSCPRRHIKKVFCQ 149
Query: 2000 TFKATGSCALGA-KCRLHHPK 2019
+ TG C LG +C + HP+
Sbjct: 150 RY-MTGFCPLGKDECDMEHPQ 169
>gi|365757902|gb|EHM99773.1| Yth1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401838431|gb|EJT42071.1| YTH1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 208
Score = 63.5 bits (153), Expect = 1e-06, Method: Composition-based stats.
Identities = 46/141 (32%), Positives = 70/141 (49%), Gaps = 14/141 (9%)
Query: 1891 RKYCQFF-TRFGKCNKDNGK-CPYIHD----PSKIAVCTKFLKGLCSNSD-CKLTHKVIP 1943
R C+F+ +R G + G CP H +KI VC +L+GLC +D C+ H+
Sbjct: 31 RPICEFYNSREGPKSCPRGPLCPKKHVLPIFQNKI-VCRHWLRGLCKKNDQCEYLHEYNL 89
Query: 1944 ERMPDCSYFLQ-GLCTNK-NCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCP 1999
+MP+C +F + G CT +C Y H+ CE + G+C G C ++H C
Sbjct: 90 RKMPECVFFSKNGYCTQSPDCQYLHIDPASKIPKCENYEMGFCPLGSTCPRRHIKKVFCQ 149
Query: 2000 TFKATGSCALGA-KCRLHHPK 2019
+ TG C LG +C + HP+
Sbjct: 150 RY-MTGFCPLGKEECDMEHPQ 169
>gi|402085474|gb|EJT80372.1| mRNA 3'-end-processing protein yth-1 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 296
Score = 63.5 bits (153), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCE 1977
VC +L+GLC D C+ H+ +MP+C+++L+ G C N + C Y H+ C
Sbjct: 95 VCKHWLRGLCKKGDSCEFLHEYNLRKMPECNFYLRHGFCQNGEECMYLHIDPQSKLPPCP 154
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRL-HHPK 2019
+ +G+C G C KKH +CP + G C G CR HP+
Sbjct: 155 HYDQGFCPLGPRCAKKHVRRQLCPYY-LCGFCPDGRACRQGAHPR 198
>gi|429858684|gb|ELA33497.1| zinc finger ccch type domain containing protein [Colletotrichum
gloeosporioides Nara gc5]
Length = 257
Score = 63.5 bits (153), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 7/112 (6%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCE 1977
VC +L+GLC + C+ H+ +MP+C++F++ G C+N + C Y H+ C
Sbjct: 82 VCKHWLRGLCKKGESCEFLHEYNLRKMPECNFFMRNGYCSNGEECLYLHIDPQSKLPPCP 141
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRL-HHPKSRSNGKK 2026
+ KG+C G C KKH +C + G C G C+ HP+ R++ +K
Sbjct: 142 HYDKGFCPLGPRCSKKHVRRKLC-VYYLVGFCPEGPVCKFGAHPRWRTDLEK 192
>gi|320591873|gb|EFX04312.1| mRNA cleavage and polyadenylation specificity factor complex subunit
[Grosmannia clavigera kw1407]
Length = 702
Score = 63.5 bits (153), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 7/100 (7%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKN-CPYRHVHVNPNASTCE 1977
VC +L+GLC + C+ H+ +MP+C++FL+ G C+N + C Y H+ C
Sbjct: 462 VCKHWLRGLCKKGEGCEFLHEYNLRKMPECNFFLRNGFCSNGDECLYLHIDPRSKLPPCP 521
Query: 1978 GF-LKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCR 2014
+ +G+CA G C KKH +CP + A G C G C+
Sbjct: 522 DYDDRGFCALGPRCPKKHVRRLLCPCYLA-GFCPSGRACK 560
>gi|303388037|ref|XP_003072253.1| zinc finger domain-containing protein [Encephalitozoon intestinalis
ATCC 50506]
gi|303301392|gb|ADM10893.1| zinc finger domain-containing protein [Encephalitozoon intestinalis
ATCC 50506]
Length = 176
Score = 63.5 bits (153), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 65/126 (51%), Gaps = 13/126 (10%)
Query: 1920 AVCTKFLKGLCSNS-DCKLTHKVIPERMPDCSYFL-QGLCTNKNCPYRHVHVNPNAST-- 1975
VC +L+GLC C+ H+ RMP+C +F G C N C Y +H++PN+S+
Sbjct: 50 VVCKHWLRGLCKKGIKCEFMHEYDLSRMPECYFFSSYGECMNPECNY--IHIDPNSSSKE 107
Query: 1976 CEGFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPKSRSN-GKKSRRS-- 2030
C + +G+C +G C+ KH +C + G C G C HPK N G++ RS
Sbjct: 108 CPWYNRGFCRNGASCKNKHVRKKLCYNY-FLGFCPKGPTCDYGHPKFNINPGREISRSDI 166
Query: 2031 -RKPKN 2035
+KP N
Sbjct: 167 IQKPSN 172
>gi|340924394|gb|EGS19297.1| putative mRNA 3'-end processing protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 265
Score = 63.5 bits (153), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 1904 NKDNGKCPYIHDPSKIA-----VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GL 1956
N +NGK P VC +L+ LC + C+ H+ +MP+C++F++ G
Sbjct: 76 NANNGKDPQTGTGGGGGGFGSLVCKHWLRALCKKGETCEFLHEYNLRKMPECNFFVRNGY 135
Query: 1957 CTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKC 2013
C+N + C Y H+ + C + +G+C G +C KKH +CP + A G C G C
Sbjct: 136 CSNGDECLYLHIDPSSRVPPCPAYERGFCPAGPKCDKKHVKRKMCPYYLA-GFCPEGKAC 194
Query: 2014 RL-HHPK 2019
+ HPK
Sbjct: 195 KEGAHPK 201
>gi|19113874|ref|NP_592962.1| mRNA cleavage and polyadenylation specificity factor complex Yth1
[Schizosaccharomyces pombe 972h-]
gi|74625941|sp|Q9UTD1.1|YTH1_SCHPO RecName: Full=mRNA 3'-end-processing protein yth1
gi|6455911|emb|CAB61457.1| mRNA cleavage and polyadenylation specificity factor complex Yth1
[Schizosaccharomyces pombe]
Length = 170
Score = 63.2 bits (152), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 1897 FTRFGKCNKDNGKCPYIHDPSKIA--VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFL 1953
F R N NG+ SK+ VC +L+GLC + C H+ ++MP C ++
Sbjct: 31 FGRSALLNSGNGR----DSGSKMGSVVCKHWLRGLCKKGEQCDFLHEYNLKKMPPCHFYA 86
Query: 1954 Q-GLCTN-KNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH---SYVCPTFKATGSCA 2008
+ G C+N + C Y H+ + C + G+C G CR KH CP + A G C
Sbjct: 87 ERGWCSNGEECLYLHLDPSKQVGVCAWYNMGFCPLGPICRGKHVRKPRPCPKYLA-GFCP 145
Query: 2009 LGAKCRLHHPK 2019
LG C HPK
Sbjct: 146 LGPNCPDAHPK 156
>gi|85690955|ref|XP_965877.1| hypothetical protein ECU01_0430 [Encephalitozoon cuniculi GB-M1]
gi|19068444|emb|CAD24912.1| ZINC FINGER PROTEIN [Encephalitozoon cuniculi GB-M1]
gi|449329823|gb|AGE96092.1| zinc finger protein [Encephalitozoon cuniculi]
Length = 176
Score = 63.2 bits (152), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 13/129 (10%)
Query: 1917 SKIAVCTKFLKGLCSNS-DCKLTHKVIPERMPDCSYFL-QGLCTNKNCPYRHVHVNPNAS 1974
S VC +L+GLC C+ H+ RMP+C +F G C N C Y +H++PN+S
Sbjct: 47 STAVVCKHWLRGLCKKGIKCEFMHEYDLSRMPECYFFSSYGECMNPECNY--IHIDPNSS 104
Query: 1975 T--CEGFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPKSR-SNGKKSRR 2029
+ C + +G+C +G C+ KH +C + G C G C HPK S G++ R
Sbjct: 105 SKECPWYNRGFCRNGASCKNKHVRKKLCYNY-FLGFCPKGLNCDYGHPKFNISPGREISR 163
Query: 2030 S---RKPKN 2035
S +KP N
Sbjct: 164 SDIIQKPSN 172
>gi|395826008|ref|XP_003786212.1| PREDICTED: LOW QUALITY PROTEIN: putative cleavage and polyadenylation
specificity factor subunit 4-like protein [Otolemur
garnettii]
Length = 166
Score = 62.8 bits (151), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 10/128 (7%)
Query: 1894 CQFFTRFGKCNKDNGK-CPYIHDP-SKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCS 1950
C F + G C K GK CP+ H+ K VC + + LC D C H+ RMP
Sbjct: 41 CNSFAK-GLCKK--GKLCPFWHERREKXLVCKHWRRELCKKGDHCGSLHQCNIARMPQRY 97
Query: 1951 YFLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSC 2007
++ + G C NK CP+ HV + C + +G+C +G C+ +H +C + G C
Sbjct: 98 FYSKFGDCNNKQCPFLHVKPAFRSQDCPWYDQGFCQNGPLCKYRHVPRIMCLNY-LVGFC 156
Query: 2008 ALGAKCRL 2015
G KC+
Sbjct: 157 PEGPKCQF 164
>gi|255724604|ref|XP_002547231.1| protein YTH1 [Candida tropicalis MYA-3404]
gi|240135122|gb|EER34676.1| protein YTH1 [Candida tropicalis MYA-3404]
Length = 207
Score = 62.8 bits (151), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 13/140 (9%)
Query: 1891 RKYCQFFTRFGK---CNKDNGKCPYIHDPSKIA---VCTKFLKGLCSNSD-CKLTHKVIP 1943
R CQF+ C + N CP H + + VC +L+GLC D C+ H+
Sbjct: 35 RPVCQFYNPMNPETSCPQGNN-CPNKHVSAMYSNKIVCKHWLRGLCKKGDHCEFLHEYNL 93
Query: 1944 ERMPDCSYFLQ-GLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCP 1999
+MP+C ++ + G CT + C Y HV C + +G+C+DG C+ +H +CP
Sbjct: 94 RKMPECLFYSKNGYCTQTSECLYLHVDPQSKIPECVNYNQGFCSDGPNCKNRHVRRVLCP 153
Query: 2000 TFKATGSCALGAKCRLHHPK 2019
+ G C G +C HPK
Sbjct: 154 LY-LYGFCPKGPECEFTHPK 172
>gi|79356321|ref|NP_174334.2| cleavage and polyadenylation specificity factor CPSF30 [Arabidopsis
thaliana]
gi|229553918|sp|A9LNK9.1|CPSF_ARATH RecName: Full=Cleavage and polyadenylation specificity factor CPSF30;
AltName: Full=Zinc finger CCCH domain-containing protein
11; Short=AtC3H11
gi|160338218|gb|ABX26048.1| cleavage and polyadenylation specificity factor-YT521B [Arabidopsis
thaliana]
gi|332193100|gb|AEE31221.1| cleavage and polyadenylation specificity factor CPSF30 [Arabidopsis
thaliana]
Length = 631
Score = 62.4 bits (150), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYF-LQGLCTNKNCPYRHVHVNPNASTCEG 1978
VC +L+GLC D C H+ RMP C +F L G C ++C Y+H N + C
Sbjct: 65 VCRHWLRGLCMKGDACGFLHQFDKARMPICRFFRLYGECREQDCVYKHT--NEDIKECNM 122
Query: 1979 FLKGYCADGDECRKKHS 1995
+ G+C +G +CR +H+
Sbjct: 123 YKLGFCPNGPDCRYRHA 139
>gi|401825077|ref|XP_003886634.1| cleavage and polyadenylation specificity factor subunit Clipper
[Encephalitozoon hellem ATCC 50504]
gi|395459779|gb|AFM97653.1| cleavage and polyadenylation specificity factor subunit Clipper
[Encephalitozoon hellem ATCC 50504]
Length = 176
Score = 62.4 bits (150), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 9/113 (7%)
Query: 1917 SKIAVCTKFLKGLCSNS-DCKLTHKVIPERMPDCSYFL-QGLCTNKNCPYRHVHVNPNAS 1974
S VC +L+GLC C+ H+ RMP+C +F G C N C Y +H++PN+S
Sbjct: 47 STAVVCKHWLRGLCKKGIKCEFMHEYDLSRMPECYFFSSYGECMNPECNY--IHIDPNSS 104
Query: 1975 T--CEGFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPKSRSN 2023
+ C + +G+C +G C+ KH +C + G C G C HPK N
Sbjct: 105 SKECPWYNRGFCRNGASCKNKHVRKKLCYNY-FLGFCPRGPDCDYGHPKFNIN 156
>gi|76154459|gb|AAX25938.2| SJCHGC02620 protein [Schistosoma japonicum]
Length = 160
Score = 62.4 bits (150), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 1919 IAVCTKFLKGLCS--NSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTC 1976
+ +C +FL+ C+ + C L H + P R+P C+YF G C +CPY HV + C
Sbjct: 4 LRICPRFLQQNCALGSDSCPLAHVLDPCRLPQCTYFESGNCERAHCPYLHVKHHFKTVIC 63
Query: 1977 EGFLKGYCADGDECRKKHSYV 1997
F +G C G C K+H ++
Sbjct: 64 PDFARGRCPLGRLCNKRHIWI 84
>gi|396080745|gb|AFN82366.1| zinc finger domain-containing protein [Encephalitozoon romaleae
SJ-2008]
Length = 176
Score = 62.4 bits (150), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 9/113 (7%)
Query: 1917 SKIAVCTKFLKGLCSNS-DCKLTHKVIPERMPDCSYFL-QGLCTNKNCPYRHVHVNPNAS 1974
S VC +L+GLC C+ H+ RMP+C +F G C N C Y +H++PN+S
Sbjct: 47 STAVVCKHWLRGLCKKGIKCEFMHEYDLSRMPECYFFSSYGECMNPECNY--IHIDPNSS 104
Query: 1975 T--CEGFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPKSRSN 2023
+ C + +G+C +G C+ KH +C + G C G C HPK N
Sbjct: 105 SKECPWYNRGFCRNGASCKNKHVRKKLCYNY-FLGFCPRGPTCDYGHPKFNIN 156
>gi|401623156|gb|EJS41263.1| yth1p [Saccharomyces arboricola H-6]
Length = 208
Score = 62.0 bits (149), Expect = 3e-06, Method: Composition-based stats.
Identities = 45/141 (31%), Positives = 70/141 (49%), Gaps = 14/141 (9%)
Query: 1891 RKYCQFF-TRFGKCNKDNGK-CPYIHD----PSKIAVCTKFLKGLCSNSD-CKLTHKVIP 1943
R C+F+ +R G + G CP H +KI VC +L+GLC +D C+ H+
Sbjct: 31 RPICEFYNSREGPQSCPRGSLCPKKHVLPIFQNKI-VCRHWLRGLCKKNDQCEYLHEYNL 89
Query: 1944 ERMPDCSYFLQ-GLCTNK-NCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCP 1999
+MP+C +F + G CT +C Y H+ CE + G+C G C ++H C
Sbjct: 90 RKMPECVFFSKNGYCTQSPDCQYLHIDPASKIPKCENYEMGFCPLGSTCPRRHIKKVFCQ 149
Query: 2000 TFKATGSCALGA-KCRLHHPK 2019
+ +G C LG +C + HP+
Sbjct: 150 RY-MSGFCPLGKDECDMEHPQ 169
>gi|307104178|gb|EFN52433.1| hypothetical protein CHLNCDRAFT_138954 [Chlorella variabilis]
Length = 233
Score = 62.0 bits (149), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRHVHVNPNASTCEG 1978
VCT +L+GLC D C H+ PERMP C L+ G+C +CPY+H C
Sbjct: 45 VCTYWLRGLCMKGDTCGFLHQFDPERMPVCRSLLKFGVCKEPDCPYKHTL--EAIKECNM 102
Query: 1979 FLKGYCADGDECRKKHS 1995
+ G+C G CR KH+
Sbjct: 103 YKLGFCIYGPACRFKHT 119
>gi|91087903|ref|XP_970676.1| PREDICTED: similar to AGAP011127-PA [Tribolium castaneum]
gi|270011940|gb|EFA08388.1| hypothetical protein TcasGA2_TC006035 [Tribolium castaneum]
Length = 962
Score = 62.0 bits (149), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 69/177 (38%), Gaps = 16/177 (9%)
Query: 1949 CSYFLQGLCTNKNCPYRHVHVNP-NASTCEGFLKGYCADGDECRKKHS-YVCPTFKATGS 2006
C +FLQG C +CPY H V P C+ +LK CA G++C HS + C +
Sbjct: 249 CVFFLQGKCQKNDCPYSHEAVPPMKLELCKFYLKDCCAKGEKCSYMHSEFPCKLYHTGLV 308
Query: 2007 CALGAKCRLHHPKSRSNGKKSRRSRKPKNTHGRYFGSMLVEDSESQTAMSERPTVQNNGN 2066
C G C+ H K +K + + G R + N N
Sbjct: 309 CVQGDNCKFAHGKPLDEHRKQILFKHIETAPREILGGF---------PRMNREELLNKIN 359
Query: 2067 LFVEGKLVDYIGLDVSDKEAGETND----ALHELLDFNDSGASELQLDDLDELIKPI 2119
+ + +V Y G++ SDK T D EL D N + D D +IKP
Sbjct: 360 VAQQNLMVQY-GIEKSDKGGVPTLDVNMGVPPELADSNKKRNKPSRWQDPDPVIKPF 415
>gi|297851474|ref|XP_002893618.1| hypothetical protein ARALYDRAFT_890588 [Arabidopsis lyrata subsp.
lyrata]
gi|297339460|gb|EFH69877.1| hypothetical protein ARALYDRAFT_890588 [Arabidopsis lyrata subsp.
lyrata]
Length = 631
Score = 62.0 bits (149), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYF-LQGLCTNKNCPYRHVHVNPNASTCEG 1978
VC +L+GLC D C H+ RMP C +F L G C ++C Y+H N + C
Sbjct: 65 VCRHWLRGLCMKGDACGFLHQYDKARMPICRFFRLYGECREQDCVYKHT--NEDIKECNM 122
Query: 1979 FLKGYCADGDECRKKHS 1995
+ G+C +G +CR +H+
Sbjct: 123 YKLGFCPNGPDCRYRHA 139
>gi|389641403|ref|XP_003718334.1| mRNA 3'-end-processing protein yth-1 [Magnaporthe oryzae 70-15]
gi|351640887|gb|EHA48750.1| mRNA 3'-end-processing protein yth-1 [Magnaporthe oryzae 70-15]
gi|440470731|gb|ELQ39790.1| mRNA 3'-end-processing protein yth-1 [Magnaporthe oryzae Y34]
gi|440487615|gb|ELQ67394.1| mRNA 3'-end-processing protein yth-1 [Magnaporthe oryzae P131]
Length = 276
Score = 62.0 bits (149), Expect = 4e-06, Method: Composition-based stats.
Identities = 43/160 (26%), Positives = 71/160 (44%), Gaps = 28/160 (17%)
Query: 1881 HTARLRLARKRKYCQFFTRFGKCNKDNGKC--PYIHDPSKIA------------------ 1920
T + L R C+ + G C + +C ++ DPS+++
Sbjct: 31 QTYQHSLPSDRPICKVYASGGNC-PNGTRCLERHVADPSQLSNAQSGYGSGKRDGPAFNS 89
Query: 1921 -VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTC 1976
VC +L+GLC D C+ H+ RMP+C+++++ G C N + C Y H+ C
Sbjct: 90 LVCKHWLRGLCKKGDGCEFLHEYNLRRMPECNFYIRNGYCQNGEECLYLHIDPQSKLPPC 149
Query: 1977 EGFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCR 2014
+ +G+C G C KKH +CP + G C G C+
Sbjct: 150 PHYDQGFCPLGPRCSKKHVRRNLCPYY-LCGFCPDGRLCK 188
>gi|440639939|gb|ELR09858.1| hypothetical protein GMDG_04338 [Geomyces destructans 20631-21]
Length = 251
Score = 61.6 bits (148), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 11/123 (8%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCE 1977
VC +L+GLC + C+ H+ RMP+CS+F + G C+N + C Y HV C
Sbjct: 72 VCKHWLRGLCKKGEHCEFLHEYNLRRMPECSFFARNGYCSNGEECLYLHVDPESRLPACG 131
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKC-RLHHPKSRSNGK----KSRRS 2030
+ +G+C G C ++H +C F G C G KC H + +++G K R
Sbjct: 132 WYERGFCPLGPRCARRHMRRELC-RFYLAGFCPEGKKCTEGAHARWKADGDLEELKVRVV 190
Query: 2031 RKP 2033
R P
Sbjct: 191 RDP 193
Score = 46.2 bits (108), Expect = 0.22, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 13/88 (14%)
Query: 1947 PDCSYFLQGLCT-NKNCPYRHVHV----NPNASTCEGFLKGYCADGDECRKKHSY----- 1996
P C ++ G C +CP RH+ N N C+ +L+G C G+ C H Y
Sbjct: 39 PPCKAYVAGHCPLGASCPDRHIAAPTGSNYNNLVCKHWLRGLCKKGEHCEFLHEYNLRRM 98
Query: 1997 -VCPTFKATGSCALGAKCRLHH--PKSR 2021
C F G C+ G +C H P+SR
Sbjct: 99 PECSFFARNGYCSNGEECLYLHVDPESR 126
>gi|347830972|emb|CCD46669.1| hypothetical protein [Botryotinia fuckeliana]
Length = 277
Score = 61.6 bits (148), Expect = 5e-06, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 56/125 (44%), Gaps = 23/125 (18%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTN------------------K 1960
VC +L+GLC + C+ H+ +MP+C++F++ G C+N
Sbjct: 87 VCKHWLRGLCKKGETCEFLHEFNLRKMPECNFFVKNGYCSNGGTFVWLSDAPRVTLTSLD 146
Query: 1961 NCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHP 2018
C Y HV C + KG+C G C KKH +C F G C G KC+ HP
Sbjct: 147 ECLYLHVDPASKMGNCPHYDKGFCPLGPRCSKKHIRKALC-EFYLAGFCPDGPKCKKAHP 205
Query: 2019 KSRSN 2023
+ S+
Sbjct: 206 RWPSD 210
>gi|281345617|gb|EFB21201.1| hypothetical protein PANDA_015854 [Ailuropoda melanoleuca]
Length = 102
Score = 61.6 bits (148), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 1919 IAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRHVHVNPNASTC 1976
+ VC +L+GLC D C H+ RMP+C + + G C NK C + HV N C
Sbjct: 1 MVVCKHWLRGLCKKGDQCSFLHQYDVTRMPECYFHSKFGDCNNKECSFLHVKPAFNTRDC 60
Query: 1977 EGFLKGYCAD-GDECRKKHSY--VCPTFKATGSCALGAKCRL 2015
+ +G+C D G C+ +H + +C + G C G C+
Sbjct: 61 PWYDQGFCKDAGPLCKHRHVHKTMCVNY-LVGFCPKGPHCQF 101
Score = 53.5 bits (127), Expect = 0.001, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 15/105 (14%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH--DPSKIAVC---TKFLKGLCSNSDCKLTHKVIPERMPD 1948
C+ + R G C K + +C ++H D +++ C +KF G C+N +C H D
Sbjct: 4 CKHWLR-GLCKKGD-QCSFLHQYDVTRMPECYFHSKF--GDCNNKECSFLHVKPAFNTRD 59
Query: 1949 CSYFLQGLCTNKN--CPYRHVHVNPNASTCEGFLKGYCADGDECR 1991
C ++ QG C + C +RHVH + C +L G+C G C+
Sbjct: 60 CPWYDQGFCKDAGPLCKHRHVH----KTMCVNYLVGFCPKGPHCQ 100
>gi|345561432|gb|EGX44521.1| hypothetical protein AOL_s00188g189 [Arthrobotrys oligospora ATCC
24927]
Length = 332
Score = 61.6 bits (148), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 65/150 (43%), Gaps = 13/150 (8%)
Query: 1884 RLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIA----VCTKFLKGLCSNSD-CKLT 1938
R L R C+ F G C N CP H VC +L+GLC D C
Sbjct: 112 RFGLDPNRDVCRLFLA-GHCPNGNA-CPDRHTVGTAGLNNLVCKHWLRGLCKKGDACDFL 169
Query: 1939 HKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH-- 1994
H+ RMP+CS+ ++ G C N +C Y H S C + G+C G C KKH
Sbjct: 170 HEYNLRRMPECSFLIRYGYCQNGDDCLYFHPDPENRTSLCPHYENGFCPLGPTCAKKHVR 229
Query: 1995 SYVCPTFKATGSCALGAKCRL-HHPKSRSN 2023
+C F G C G +CR HPK ++
Sbjct: 230 KNIC-KFYFAGFCPDGRECREGAHPKWNTD 258
>gi|255951282|ref|XP_002566408.1| Pc22g25210 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211593425|emb|CAP99809.1| Pc22g25210 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 256
Score = 61.6 bits (148), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 52/108 (48%), Gaps = 6/108 (5%)
Query: 1921 VCTKFLKGLCSNS-DCKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCE 1977
VC FLKGLC C+ H+ RMP+C F + G CTN +C Y+HV CE
Sbjct: 93 VCKHFLKGLCKKGLKCEYLHEYNLRRMPECQSFSRSGYCTNGDDCLYQHVREEARLPPCE 152
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPKSRSN 2023
+ +GYC G C K+H +C F G C G C HP+ N
Sbjct: 153 HYDRGYCELGPLCAKRHVRRRLC-AFYLAGFCPDGKACANAHPRWPEN 199
>gi|412989291|emb|CCO15882.1| predicted protein [Bathycoccus prasinos]
Length = 218
Score = 61.6 bits (148), Expect = 5e-06, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRHVHVNPNASTCEG 1978
VC +L+ LC D C H+ ERMP C YF + G C +CPY+H N + C
Sbjct: 44 VCRHWLRNLCMKGDKCGFLHQFDKERMPTCRYFAKYGECKEPDCPYKHS--NDDVKECNM 101
Query: 1979 FLKGYCADGDECRKKHSYV-CPTFKATGSCALGAKCRLH 2016
+ G+C G CR KH + P +C +G +H
Sbjct: 102 YKLGFCIHGPNCRYKHIRLPGPAPPPNEACLIGRPGHIH 140
>gi|67516033|ref|XP_657902.1| hypothetical protein AN0298.2 [Aspergillus nidulans FGSC A4]
gi|74599076|sp|Q5BGN2.1|YTH1_EMENI RecName: Full=mRNA 3'-end-processing protein yth1
gi|40746548|gb|EAA65704.1| hypothetical protein AN0298.2 [Aspergillus nidulans FGSC A4]
gi|259489475|tpe|CBF89777.1| TPA: mRNA 3'-end-processing protein yth1
[Source:UniProtKB/Swiss-Prot;Acc:Q5BGN2] [Aspergillus
nidulans FGSC A4]
Length = 254
Score = 61.6 bits (148), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 54/111 (48%), Gaps = 6/111 (5%)
Query: 1921 VCTKFLKGLCSNS-DCKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCE 1977
VC FLKGLC C+ H+ RMP+C F + G C N +C Y+HV CE
Sbjct: 91 VCKHFLKGLCKKGMKCEYLHEYNLRRMPECQSFSRSGYCPNGDDCLYQHVREQARLPPCE 150
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPKSRSNGKK 2026
+ +G+C G C K+H +CP + A G C G C HP+ N K
Sbjct: 151 HYDQGFCPLGPLCAKRHVRRRLCPYYVA-GFCPEGPNCANAHPRWSENLPK 200
>gi|171695376|ref|XP_001912612.1| hypothetical protein [Podospora anserina S mat+]
gi|170947930|emb|CAP60094.1| unnamed protein product [Podospora anserina S mat+]
Length = 235
Score = 61.2 bits (147), Expect = 6e-06, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 1921 VCTKFLKGLCSNS-DCKLTHKVIPERMPDCSYFLQ-GLCTNKN-CPYRHVHVNPNASTCE 1977
VC +L+GLC C+ H+ +MP+C++F++ G C+N + C Y H+ + C
Sbjct: 64 VCKHWLRGLCKKGLTCEFLHEYNLRKMPECNFFVRNGYCSNGDECLYLHIDPSSKLPPCP 123
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRL-HHPK 2019
+ +G+C G +C K+H +C + A G C G +CR HP+
Sbjct: 124 HYDRGFCPLGPKCDKRHLKRNICLYYLA-GFCPDGKQCRQGAHPR 167
>gi|322711967|gb|EFZ03540.1| Zinc finger CCCH type domain containing protein [Metarhizium
anisopliae ARSEF 23]
Length = 277
Score = 61.2 bits (147), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 6/104 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCE 1977
VC +L+GLC + C+ H+ +MP+C++F++ G C+N + C Y HV + C
Sbjct: 80 VCKHWLRGLCKKGEHCEFLHEYNLRKMPECNFFMRNGYCSNGEECLYLHVDPSSRLPPCP 139
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPK 2019
+ G+C G C KKH +C F G C G +C+ HPK
Sbjct: 140 HYDMGFCPLGPLCSKKHVRRKLC-VFYLAGFCPDGPECKAAHPK 182
>gi|402587172|gb|EJW81107.1| hypothetical protein WUBG_07983, partial [Wuchereria bancrofti]
Length = 309
Score = 61.2 bits (147), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 1884 RLRLARKRKY------CQFFTRFGKCNKDNGKCPYIHDPSKI----AVCTKFLKGLCSNS 1933
RLR + + Y C F C D CP+ HD +C+K + GLC
Sbjct: 193 RLRRIKDKLYTETSHECFEFAEHHHCLADVF-CPFDHDGDSTHRMTKICSKLMLGLC-RG 250
Query: 1934 DCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADG 1987
CK H + +MP C YFL+ C+N++C Y HV + CE F +G C G
Sbjct: 251 HCKQAHCLSSHQMPICDYFLRLTCSNEHCQYLHVKHAVGSKPCEDFNRGICKKG 304
>gi|444322910|ref|XP_004182096.1| hypothetical protein TBLA_0H02930 [Tetrapisispora blattae CBS 6284]
gi|387515142|emb|CCH62577.1| hypothetical protein TBLA_0H02930 [Tetrapisispora blattae CBS 6284]
Length = 980
Score = 60.8 bits (146), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 59/131 (45%), Gaps = 25/131 (19%)
Query: 1887 LARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTK-FLKGLCSNSDCKLTHKVI--P 1943
+A ++ +C+ F ++G+CN KC +IHD IA+C F +G C DC LTH+
Sbjct: 729 IAPEKPFCKQFCKYGECN--TKKCRFIHDKKNIALCKDYFFRGACY-KDCNLTHQPRGNA 785
Query: 1944 ERMPDCSYFLQGLCTNKNCPY------------RHVH---VNPNASTCEGFLKG-YCADG 1987
+P C Y G C N P+ ++VH + C F G +C DG
Sbjct: 786 NVIPVCKYDFFGTC---NYPFGAETGEYGPDYCKYVHNSKARKDYPNCMSFAYGSFCEDG 842
Query: 1988 DECRKKHSYVC 1998
C H + C
Sbjct: 843 LNCEFPHVWEC 853
>gi|380484985|emb|CCF39651.1| hypothetical protein CH063_10425 [Colletotrichum higginsianum]
Length = 251
Score = 60.8 bits (146), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 7/112 (6%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCE 1977
VC +L+GLC + C+ H+ +MP+C++F++ G C+N + C Y H+ C
Sbjct: 77 VCKHWLRGLCKKGESCEFLHEYNLRKMPECNFFMRNGYCSNGEECLYLHIDPQSKLPPCP 136
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRL-HHPKSRSNGKK 2026
+ KG+C G C KKH +C + G C G C+ HP+ R++ +K
Sbjct: 137 HYDKGFCPLGPRCSKKHVRRKLC-AYYLVGFCPEGPGCKYGAHPRWRTDLEK 187
>gi|406865146|gb|EKD18189.1| Zinc finger CCCH type domain containing protein [Marssonina brunnea
f. sp. 'multigermtubi' MB_m1]
Length = 358
Score = 60.8 bits (146), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 92/222 (41%), Gaps = 26/222 (11%)
Query: 1821 DSSPCAAGPTLEKNAKKSYIPRRLVIGNDEYVRIGNGNQLIRD----PKRRARVLASEKV 1876
D CA G + Y+ + + Y I N + PK AR + +
Sbjct: 57 DPGFCATGLITKALTAPEYLSHLITRYTNTYFAISNNMAAVLSLGPGPKDLARQILEHQA 116
Query: 1877 --------RWSLHTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIH----DPSKI--AVC 1922
++ L R + R C+ + + G C KCP H +PS VC
Sbjct: 117 PTYNFSFSKFLLENYRHGITPNRPMCKAYLQ-GHC-PLGPKCPDRHTAANNPSNYNNLVC 174
Query: 1923 TKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKN-CPYRHVHVNPNASTCEGF 1979
+L+GLC + C+ H+ +MP+C++F + G C+N + C Y H+ + C +
Sbjct: 175 KHWLRGLCKKGESCEFLHEYNLRKMPECNFFAKNGYCSNGDECLYLHLDPSSKLPPCPHY 234
Query: 1980 LKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPK 2019
KG+C G C ++H +C F G C G C+ HP+
Sbjct: 235 EKGFCPLGPVCSQRHVRKILC-VFYLAGFCPDGKTCKNAHPR 275
>gi|115387235|ref|XP_001211123.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114195207|gb|EAU36907.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 259
Score = 60.8 bits (146), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 52/108 (48%), Gaps = 6/108 (5%)
Query: 1921 VCTKFLKGLCSNS-DCKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCE 1977
VC FLKGLC C+ H+ RMP+C F + G C N +C Y+HV CE
Sbjct: 91 VCKHFLKGLCKKGLKCEYLHEYNLRRMPECQSFSRSGYCPNGDDCLYQHVREQARLPPCE 150
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPKSRSN 2023
+ +G+C G C K+H +CP F G C G C HP+ N
Sbjct: 151 HYDRGFCPLGPLCAKRHVRRRLCP-FYLAGFCPEGKNCADAHPRWSEN 197
>gi|367052203|ref|XP_003656480.1| hypothetical protein THITE_2057738 [Thielavia terrestris NRRL 8126]
gi|347003745|gb|AEO70144.1| hypothetical protein THITE_2057738 [Thielavia terrestris NRRL 8126]
Length = 281
Score = 60.8 bits (146), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKN-CPYRHVHVNPNASTCE 1977
VC +L+GLC + C+ H+ +MP+C++F++ G C+N + C Y H+ + C
Sbjct: 93 VCKHWLRGLCKKGETCEFLHEYNLRKMPECNFFVRNGYCSNGDECLYLHIDPSSRLPPCP 152
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCR 2014
+ +G+C G C KKH +CP F G C G CR
Sbjct: 153 HYERGFCPLGPRCDKKHVRRRMCP-FYLAGFCPDGRACR 190
>gi|322702104|gb|EFY93852.1| Zinc finger CCCH type domain containing protein [Metarhizium acridum
CQMa 102]
Length = 276
Score = 60.8 bits (146), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 6/104 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCE 1977
VC +L+GLC + C+ H+ +MP+C++F++ G C+N + C Y HV + C
Sbjct: 80 VCKHWLRGLCKKGEHCEFLHEYNLRKMPECNFFMRNGYCSNGEECLYLHVDPSSRLPPCP 139
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPK 2019
+ G+C G C KKH +C F G C G +C+ HPK
Sbjct: 140 HYDMGFCPLGPLCSKKHVRRKLC-VFYLAGFCPDGPECKAAHPK 182
>gi|242210067|ref|XP_002470878.1| predicted protein [Postia placenta Mad-698-R]
gi|220730105|gb|EED83968.1| predicted protein [Postia placenta Mad-698-R]
Length = 213
Score = 60.5 bits (145), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/103 (34%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCT-NKNCPYRHVHVNPNASTCE 1977
VC +L+GLC D C+ H+ RMPDC ++ + G C+ C Y H C
Sbjct: 80 VCKHWLRGLCKKGDACEFLHEYNLRRMPDCWWYAKYGYCSAGDECLY--AHPKERRIECP 137
Query: 1978 GFLKGYCADGDECRKKH-SYVCPTFKATGSCALGAKCRLHHPK 2019
+ +G+C G +C +KH V TG C LG C HPK
Sbjct: 138 DYNRGFCKLGPDCPRKHIRRVACQLYLTGFCPLGPDCPRGHPK 180
>gi|238578815|ref|XP_002388844.1| hypothetical protein MPER_12097 [Moniliophthora perniciosa FA553]
gi|215450504|gb|EEB89774.1| hypothetical protein MPER_12097 [Moniliophthora perniciosa FA553]
Length = 177
Score = 60.5 bits (145), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 1943 PERMPDCSYFLQGL-CTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPT 2000
PER P CS+FL + C NC + HV+V C F + GYC +G +C +H CP
Sbjct: 9 PERTPLCSHFLNKVRCARPNCHFPHVNVGARHGVCRDFAVLGYCENGLDCEHQHVRECPD 68
Query: 2001 FKATGSCALGAKCRLHHPKSRSNGKKSRRSRKPKNT 2036
F G+C+ C+L H ++ R+RKP +T
Sbjct: 69 FAEKGTCSTKG-CKLPH------VIRANRNRKPADT 97
>gi|121703181|ref|XP_001269855.1| mRNA cleavage and polyadenylation specificity factor complex subunit,
putative [Aspergillus clavatus NRRL 1]
gi|119397998|gb|EAW08429.1| mRNA cleavage and polyadenylation specificity factor complex subunit,
putative [Aspergillus clavatus NRRL 1]
Length = 255
Score = 60.5 bits (145), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 53/111 (47%), Gaps = 6/111 (5%)
Query: 1921 VCTKFLKGLCSNS-DCKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCE 1977
VC FLKGLC C+ H+ RMP+C F + G C N +C Y+HV CE
Sbjct: 91 VCKHFLKGLCKKGLKCEYLHEYNLRRMPECQSFTRSGYCPNGDDCLYQHVREQARLPPCE 150
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPKSRSNGKK 2026
+ +G+C G C K+H +C + A G C G C HP+ N K
Sbjct: 151 NYDQGFCELGPLCSKRHVRRRICKYYLA-GFCPEGKACTDAHPRWSENLPK 200
>gi|145324080|ref|NP_001077629.1| cleavage and polyadenylation specificity factor CPSF30 [Arabidopsis
thaliana]
gi|6634767|gb|AAF19747.1|AC009917_6 Contains similarity to gb|U96448 cleavage and polyadenylation
specificity factor 30 kDa from Bos taurus [Arabidopsis
thaliana]
gi|24415582|gb|AAN41459.1| putative cleavage and polyadenylation specificity factor 30 kDa
subunit [Arabidopsis thaliana]
gi|332193101|gb|AEE31222.1| cleavage and polyadenylation specificity factor CPSF30 [Arabidopsis
thaliana]
Length = 250
Score = 60.5 bits (145), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYF-LQGLCTNKNCPYRHVHVNPNASTCEG 1978
VC +L+GLC D C H+ RMP C +F L G C ++C Y+H N + C
Sbjct: 65 VCRHWLRGLCMKGDACGFLHQFDKARMPICRFFRLYGECREQDCVYKHT--NEDIKECNM 122
Query: 1979 FLKGYCADGDECRKKHS 1995
+ G+C +G +CR +H+
Sbjct: 123 YKLGFCPNGPDCRYRHA 139
>gi|391864871|gb|EIT74165.1| hypothetical protein Ao3042_10032 [Aspergillus oryzae 3.042]
Length = 140
Score = 60.1 bits (144), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 1951 YFLQGLCTNKNCPYRHVHVNPNASTCEGFLK-GYCADGDECRKKHSYVCPTFKATGSCAL 2009
+FL+G C+N C Y H+ + P A C F GYC G C ++H + CP + TG C
Sbjct: 2 HFLRGRCSNPECRYAHIRLIPGAPVCRDFANLGYCEKGANCDQRHVHECPDYANTGVCN- 60
Query: 2010 GAKCRLHHPKSRSNGKKSRRSRKPKNTH 2037
+CRL H +K+ + K T+
Sbjct: 61 KKRCRLPHVDRAGQIRKNTGANKVDATN 88
>gi|403338887|gb|EJY68686.1| Protein CPSF-4 [Oxytricha trifallax]
Length = 373
Score = 60.1 bits (144), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 11/117 (9%)
Query: 1884 RLRLARKRKYCQFFTRFGKCNKDNGKCPYIHD--PSKIAVCTKFLK-GLCSNSDCKLTHK 1940
R+ ++K+K G+C + CP++H KI C F++ G+CS D +
Sbjct: 22 RVDESKKKKTVCVHWLVGRCKMEE-NCPFLHVMVEDKIPPCRYFIQDGVCSKGDKCVFRH 80
Query: 1941 VIPE--RMPDCSYFLQGLC-TNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
VIP+ R DC Y+ +G C C + H+H CE ++ G+C G +C K+H
Sbjct: 81 VIPQEKRTEDCPYYERGFCRMGLFCTFNHIH----KKICENYMYGFCPKGPDCEKEH 133
>gi|261196458|ref|XP_002624632.1| mRNA cleavage and polyadenylation specificity factor complex subunit
[Ajellomyces dermatitidis SLH14081]
gi|239595877|gb|EEQ78458.1| mRNA cleavage and polyadenylation specificity factor complex subunit
[Ajellomyces dermatitidis SLH14081]
gi|239609451|gb|EEQ86438.1| mRNA cleavage and polyadenylation specificity factor complex subunit
[Ajellomyces dermatitidis ER-3]
gi|327356997|gb|EGE85854.1| mRNA 3'-end-processing protein yth1 [Ajellomyces dermatitidis ATCC
18188]
Length = 251
Score = 60.1 bits (144), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/109 (36%), Positives = 52/109 (47%), Gaps = 7/109 (6%)
Query: 1921 VCTKFLKGLCSNS-DCKLTHKVIPERMPDCSYFLQ-GLCTNKN-CPYRHVHVNPNASTCE 1977
VC FLKGLC C+ H+ RMP+C F + G C N + C Y+HV + CE
Sbjct: 88 VCKHFLKGLCKKGIKCEYLHEYNLRRMPECQNFARTGYCPNGDECLYQHVPEDAKIPPCE 147
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKC-RLHHPKSRSN 2023
+ +G+C G C KKH +C F G C G C HP+ N
Sbjct: 148 HYERGFCHLGPLCAKKHVRKKIC-RFYLAGFCPEGRACLEGAHPRWPEN 195
>gi|170085227|ref|XP_001873837.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651389|gb|EDR15629.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 292
Score = 60.1 bits (144), Expect = 1e-05, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 55/120 (45%), Gaps = 6/120 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCT-NKNCPYRHVHVNPNASTCE 1977
VC +L+GLC D C+ H+ RMP+C +F + G C+ C Y H C
Sbjct: 94 VCKHWLRGLCKKGDACEFLHEYNLRRMPECWWFAKYGYCSAGDECLY--AHPKERRVECP 151
Query: 1978 GFLKGYCADGDECRKKH-SYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSRKPKNT 2036
+ +G+C G C +KH V TG C LG +C HPK K+ +P +T
Sbjct: 152 DYNRGFCKLGPSCPRKHVRKVACQLYLTGFCPLGPECLRGHPKPDLPPAKAYEPLEPPST 211
Score = 40.8 bits (94), Expect = 8.2, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 11/70 (15%)
Query: 1963 PYRHVHVNPN-----ASTCEGFLKGYCADGDECRKKHSY------VCPTFKATGSCALGA 2011
P R + +P A+ C+ +L+G C GD C H Y C F G C+ G
Sbjct: 77 PPRQLPTHPRERERLATVCKHWLRGLCKKGDACEFLHEYNLRRMPECWWFAKYGYCSAGD 136
Query: 2012 KCRLHHPKSR 2021
+C HPK R
Sbjct: 137 ECLYAHPKER 146
>gi|148702473|gb|EDL34420.1| DNA segment, Chr 11, ERATO Doi 636, expressed, isoform CRA_b [Mus
musculus]
Length = 209
Score = 60.1 bits (144), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 54/108 (50%), Gaps = 15/108 (13%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH--DPSKIAVC---TKFLKGLCSNSDCKLTHKVIPERMPD 1948
C+ + R G C K + C ++H D SK+ VC +KF G CSN +C H ++ D
Sbjct: 35 CKHWLR-GLCRKSDC-CDFLHQYDVSKMPVCYFHSKF--GNCSNKECLFLHLKPVLKLQD 90
Query: 1949 CSYFLQGLCTNKN--CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C ++ QG C C YRHVH C + G+C +G +C+ H
Sbjct: 91 CPWYNQGFCKEVGPLCKYRHVH----QVLCPNYFTGFCPEGPQCQFGH 134
>gi|212539576|ref|XP_002149943.1| mRNA cleavage and polyadenylation specificity factor complex subunit,
putative [Talaromyces marneffei ATCC 18224]
gi|210067242|gb|EEA21334.1| mRNA cleavage and polyadenylation specificity factor complex subunit,
putative [Talaromyces marneffei ATCC 18224]
Length = 292
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 57/114 (50%), Gaps = 7/114 (6%)
Query: 1921 VCTKFLKGLCSNS-DCKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCE 1977
VC FLKGLC C+ H+ RMP+C+ F + G C N ++C Y HV CE
Sbjct: 128 VCKHFLKGLCKKGFKCEYLHEYNLRRMPECASFSRSGYCPNGEDCLYHHVRETARLPCCE 187
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRL-HHPKSRSNGKKSR 2028
+ +G+C G C K+H +CP + A G C G C+ HP+ N K +
Sbjct: 188 HYDRGFCPLGPICAKQHVRQSLCPYYLA-GFCPDGRSCQHGAHPRWSDNLPKPQ 240
>gi|119189407|ref|XP_001245310.1| hypothetical protein CIMG_04751 [Coccidioides immitis RS]
gi|392868216|gb|EAS33965.2| mRNA 3'-end-processing protein yth1 [Coccidioides immitis RS]
Length = 251
Score = 60.1 bits (144), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Query: 1921 VCTKFLKGLCSNS-DCKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCE 1977
VC +LKGLC C+ H+ RMP+C F + G C N +C Y+HV CE
Sbjct: 88 VCKHYLKGLCKKGIKCEYLHEYNLRRMPECQSFARSGYCANGDDCLYQHVSEEAKLPPCE 147
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRL-HHPKSRSNGKK 2026
+ KG+C G C KKH +CP F G C G C HP+ N K
Sbjct: 148 HYDKGFCPLGPLCAKKHVRRKICP-FYLAGFCPEGRACTTGAHPRWPENLPK 198
>gi|344243104|gb|EGV99207.1| Cleavage and polyadenylation specificity factor subunit 4 [Cricetulus
griseus]
Length = 107
Score = 59.7 bits (143), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 1910 CPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRH 1966
CP+ H K VC +L+ LC D C+ H+ +MP+ ++ + G C NK CP+ +
Sbjct: 2 CPFRHISGEKTVVCKHWLRALCKKGDQCEFLHEYDMTKMPEYYFYSKFGKCNNKECPFLY 61
Query: 1967 VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
+ C + G+C G CR +H+
Sbjct: 62 IDPESKIKDCPWYDHGFCKHGPLCRHRHT 90
>gi|83765498|dbj|BAE55641.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 112
Score = 59.7 bits (143), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 1951 YFLQGLCTNKNCPYRHVHVNPNASTCEGFLK-GYCADGDECRKKHSYVCPTFKATGSCAL 2009
+FL+G C+N C Y H+ + P A C F GYC G C ++H + CP + TG C
Sbjct: 2 HFLRGRCSNPECRYAHIRLIPGAPVCRDFANLGYCEKGANCDQRHVHECPDYANTGVCN- 60
Query: 2010 GAKCRLHHPKSRSNGKKSRRSRKPKNTH 2037
+CRL H +K+ + K T+
Sbjct: 61 KKRCRLPHVDRAGQIRKNTGANKVDATN 88
>gi|154280180|ref|XP_001540903.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150412846|gb|EDN08233.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|225562900|gb|EEH11179.1| mRNA 3'-end-processing protein yth1 [Ajellomyces capsulatus G186AR]
gi|240279725|gb|EER43230.1| mRNA 3'-end-processing protein yth1 [Ajellomyces capsulatus H143]
gi|325092854|gb|EGC46164.1| mRNA 3'-end-processing protein yth1 [Ajellomyces capsulatus H88]
Length = 251
Score = 59.7 bits (143), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/98 (38%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 1921 VCTKFLKGLCSNS-DCKLTHKVIPERMPDCSYFLQ-GLCTNKN-CPYRHVHVNPNASTCE 1977
VC FLKGLC C+ H+ RMP+C F + G C N + C Y+HV CE
Sbjct: 88 VCKHFLKGLCKKGIKCEYLHEYNLRRMPECQNFSRTGYCPNGDECLYQHVPEEAKIPLCE 147
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKC 2013
+ +G CA G C KKH +C F G C G C
Sbjct: 148 HYERGLCALGPLCAKKHVRKKIC-RFYLAGFCPEGRAC 184
>gi|169603423|ref|XP_001795133.1| hypothetical protein SNOG_04721 [Phaeosphaeria nodorum SN15]
gi|111067361|gb|EAT88481.1| hypothetical protein SNOG_04721 [Phaeosphaeria nodorum SN15]
Length = 232
Score = 59.7 bits (143), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 1918 KIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQG-LCTN-KNCPYRHVHVNPNAS 1974
K VC +L+GLC + C+ H+ RMP+CSY+ + C+N +C Y H+
Sbjct: 49 KFLVCKHWLRGLCKKGETCEFLHEYNLRRMPECSYYARTQTCSNGDDCLYLHIDPEAKRP 108
Query: 1975 TCEGFLKGYCADGDECRKKHS---YVCPTFKATGSCALGAKCR 2014
+C + +G+C G C KH+ +CP F G C G C+
Sbjct: 109 SCPHYDRGFCPLGPYCALKHNKKEKLCP-FYLCGFCPEGKGCK 150
>gi|303323107|ref|XP_003071545.1| Zinc finger CCCH type domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240111247|gb|EER29400.1| Zinc finger CCCH type domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|320033369|gb|EFW15317.1| mRNA 3'-end-processing protein yth1 [Coccidioides posadasii str.
Silveira]
Length = 251
Score = 59.7 bits (143), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Query: 1921 VCTKFLKGLCSNS-DCKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCE 1977
VC +LKGLC C+ H+ RMP+C F + G C N +C Y+HV CE
Sbjct: 88 VCKHYLKGLCKKGIKCEYLHEYNLRRMPECQAFARSGYCANGDDCLYQHVSEEAKLPPCE 147
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRL-HHPKSRSNGKK 2026
+ KG+C G C KKH +CP F G C G C HP+ N K
Sbjct: 148 HYDKGFCPLGPLCAKKHVRRKICP-FYLAGFCPEGRVCTTGAHPRWPENLPK 198
>gi|225444019|ref|XP_002281594.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Vitis vinifera]
Length = 673
Score = 59.7 bits (143), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYF-LQGLCTNKNCPYRHVHVNPNASTCEG 1978
VC +L+ LC D C H+ RMP C +F L G C ++C Y+H N + C
Sbjct: 64 VCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHT--NEDIKECNM 121
Query: 1979 FLKGYCADGDECRKKHS 1995
+ G+C +G +CR +H+
Sbjct: 122 YKLGFCPNGSDCRYRHA 138
>gi|449447537|ref|XP_004141524.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Cucumis sativus]
Length = 707
Score = 59.7 bits (143), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYF-LQGLCTNKNCPYRHVHVNPNASTCEG 1978
VC +L+ LC D C H+ RMP C +F L G C ++C Y+H N + C
Sbjct: 79 VCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQDCVYKHT--NEDIKECNM 136
Query: 1979 FLKGYCADGDECRKKHS 1995
+ G+C +G +CR +H+
Sbjct: 137 YKFGFCPNGPDCRYRHA 153
>gi|384247363|gb|EIE20850.1| hypothetical protein COCSUDRAFT_9790, partial [Coccomyxa
subellipsoidea C-169]
Length = 76
Score = 59.7 bits (143), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 1921 VCTKFLKGLC-SNSDCKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRHVHVNPNASTCEG 1978
VCT +LKGLC +C H++ P+RMP C L+ G C + CP++H C
Sbjct: 3 VCTYWLKGLCMKGEECGFLHQLDPQRMPVCRTLLKFGECKDPECPFKHNL--EEVKECNM 60
Query: 1979 FLKGYCADGDECRKKH 1994
+ G+C G CR +H
Sbjct: 61 YKLGFCVYGPRCRFRH 76
>gi|452001978|gb|EMD94437.1| hypothetical protein COCHEDRAFT_1222928 [Cochliobolus heterostrophus
C5]
Length = 255
Score = 59.7 bits (143), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 13/153 (8%)
Query: 1884 RLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIA---VCTKFLKGLCSNSD-CKLTH 1939
R L R C+ + + G C D KCP H+ S VC +L+GLC + C+ H
Sbjct: 38 RFGLNPDRPTCKAYLQ-GHC-PDGSKCPNKHNVSSSYNNLVCKHWLRGLCKKGETCEFLH 95
Query: 1940 KVIPERMPDCSYFLQG-LCTN-KNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS-- 1995
+ RMP+CSY+ + C+N +C Y H+ + ++C + +G+C G C KH+
Sbjct: 96 EYNLRRMPECSYYARTQTCSNGDDCLYLHLDPDAKRASCPHYDRGFCPLGPHCALKHNKK 155
Query: 1996 -YVCPTFKATGSCALGAKCRL-HHPKSRSNGKK 2026
+CP F G C G C+ HP+ ++ KK
Sbjct: 156 DKLCP-FYLCGFCPEGKGCKYGAHPRYPTDLKK 187
>gi|168001521|ref|XP_001753463.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695342|gb|EDQ81686.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 981
Score = 59.7 bits (143), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRHVHVNPNASTCEG 1978
VC +L+GLC D C H+ RMP C +F + G C +C Y+H N + C
Sbjct: 62 VCRHWLRGLCMKGDACGFLHQFDKARMPVCRFFAKFGECREPDCIYKHT--NEDIKECNM 119
Query: 1979 FLKGYCADGDECRKKH 1994
+ G+C +G +CR +H
Sbjct: 120 YKLGFCPNGPDCRYRH 135
Score = 43.9 bits (102), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNS-DCKLTHKVIPERMPDCSYF 1952
C+FF +FG+C + + C Y H I C + G C N DC+ H+ +P P
Sbjct: 91 CRFFAKFGECREPD--CIYKHTNEDIKECNMYKLGFCPNGPDCRYRHQKLPGPPPSVDQN 148
Query: 1953 LQ 1954
LQ
Sbjct: 149 LQ 150
>gi|74145512|dbj|BAE36185.1| unnamed protein product [Mus musculus]
gi|148702472|gb|EDL34419.1| DNA segment, Chr 11, ERATO Doi 636, expressed, isoform CRA_a [Mus
musculus]
Length = 160
Score = 59.7 bits (143), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDP-SKIAVCTKFLKGLCSNSDC-KLTHKVIPERMPDCSY 1951
C FF + G C K CP H+ K+ VC +L+GLC SDC H+ +MP C +
Sbjct: 41 CNFFAK-GLCVK-GMLCPLRHEQGEKLVVCKHWLRGLCRKSDCCDFLHQYDVSKMPVCYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKK 1993
+ G C+NK C + H+ C + +G+C +G R +
Sbjct: 99 HSKFGNCSNKECLFLHLKPVLKLQDCPWYNQGFCKEGKSLRDR 141
>gi|47228963|emb|CAG09478.1| unnamed protein product [Tetraodon nigroviridis]
Length = 855
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNA--STCEGFLKGYCADGDECRKKHS--YVCPTFKA 2003
C YFL+G C + C + H HV P+ C+ +L+GYC+ GD C H+ Y C F
Sbjct: 5 CKYFLEGRCIKGDQCKFEHEHVVPDKKKELCKFYLQGYCSKGDNCIYMHNILYPCKFFHT 64
Query: 2004 TGSCALGAKCRLHH 2017
C G C+ H
Sbjct: 65 GAKCYQGDNCKFSH 78
Score = 50.1 bits (118), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHK-VIPERMPD-CSYFLQGLCT-NKNCPYRHVHVNPNASTC 1976
+C FL+G C D CK H+ V+P++ + C ++LQG C+ NC Y H + P C
Sbjct: 4 ICKYFLEGRCIKGDQCKFEHEHVVPDKKKELCKFYLQGYCSKGDNCIYMHNILYP----C 59
Query: 1977 EGFLKGY-CADGDECRKKHSYV 1997
+ F G C GD C+ H +
Sbjct: 60 KFFHTGAKCYQGDNCKFSHDAL 81
>gi|258566097|ref|XP_002583793.1| hypothetical protein UREG_06760 [Uncinocarpus reesii 1704]
gi|237907494|gb|EEP81895.1| hypothetical protein UREG_06760 [Uncinocarpus reesii 1704]
Length = 251
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 1921 VCTKFLKGLCSNS-DCKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCE 1977
VC +LKGLC C+ H+ RMP+C F + G C N +C Y+HV +CE
Sbjct: 88 VCKHYLKGLCKKGIKCEYLHEYNLRRMPECQSFSRSGYCPNGDDCLYQHVPEEAKLPSCE 147
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKC 2013
+ KG+C G C KKH +CP F G C G C
Sbjct: 148 HYEKGFCPLGPLCAKKHVRRKICP-FYLAGFCPDGRAC 184
>gi|270002662|gb|EEZ99109.1| hypothetical protein TcasGA2_TC005002 [Tribolium castaneum]
Length = 258
Score = 59.3 bits (142), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 54/129 (41%), Gaps = 25/129 (19%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYF 1952
CQF+T C K +CP+ H + VC +L+GLC D C ++
Sbjct: 41 CQFYTSIQGCQK-GPQCPFRHVRGDRTIVCKHWLRGLCKKGD-------------QCEFY 86
Query: 1953 LQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCALG 2010
+ CP+ H+ C + +G+C G CR +H +C + A G C G
Sbjct: 87 TK-------CPFLHIDPESKIKDCPWYDRGFCRHGPHCRHRHVRRVLCTNYLA-GFCPEG 138
Query: 2011 AKCRLHHPK 2019
C+ HP+
Sbjct: 139 PNCKYVHPR 147
>gi|358417658|ref|XP_003583705.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC790056
[Bos taurus]
Length = 752
Score = 59.3 bits (142), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHD-PSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSY- 1951
C FFT+ G C K CP+ HD K VC K CK H+ RMP+C +
Sbjct: 635 CTFFTK-GLCEKGK-LCPFRHDRGEKPVVCKK-------GDQCKFLHQYDVARMPECHFS 685
Query: 1952 FLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
F G C NK P+ HV C + +G+C G C+ +H
Sbjct: 686 FKSGDCNNKERPFLHVKPAFKTQHCPWYDRGFCKHGPLCKYRH 728
>gi|255564409|ref|XP_002523201.1| conserved hypothetical protein [Ricinus communis]
gi|223537608|gb|EEF39232.1| conserved hypothetical protein [Ricinus communis]
Length = 702
Score = 59.3 bits (142), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYF-LQGLCTNKNCPYRHVHVNPNASTCEG 1978
VC +L+ LC D C H+ RMP C +F L G C ++C Y+H N + C
Sbjct: 77 VCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHT--NEDIKECNM 134
Query: 1979 FLKGYCADGDECRKKHS 1995
+ G+C +G +CR +H+
Sbjct: 135 YKLGFCPNGPDCRYRHA 151
>gi|356555859|ref|XP_003546247.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Glycine max]
Length = 691
Score = 59.3 bits (142), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYF-LQGLCTNKNCPYRHVHVNPNASTCEG 1978
VC +L+ LC D C H+ RMP C +F L G C ++C Y+H N + C
Sbjct: 74 VCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLYGECREQDCVYKHT--NEDIKECNM 131
Query: 1979 FLKGYCADGDECRKKHS 1995
+ G+C +G +CR +H+
Sbjct: 132 YKLGFCPNGPDCRYRHA 148
>gi|224061049|ref|XP_002300333.1| predicted protein [Populus trichocarpa]
gi|222847591|gb|EEE85138.1| predicted protein [Populus trichocarpa]
Length = 669
Score = 59.3 bits (142), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYF-LQGLCTNKNCPYRHVHVNPNASTCEG 1978
VC +L+ LC D C H+ RMP C +F L G C ++C Y+H N + C
Sbjct: 74 VCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHT--NEDIKECNM 131
Query: 1979 FLKGYCADGDECRKKHS 1995
+ G+C +G +CR +H+
Sbjct: 132 YKLGFCPNGPDCRYRHA 148
>gi|356532407|ref|XP_003534764.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Glycine max]
Length = 681
Score = 58.9 bits (141), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYF-LQGLCTNKNCPYRHVHVNPNASTCEG 1978
VC +L+ LC D C H+ RMP C +F L G C ++C Y+H N + C
Sbjct: 74 VCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLYGECREQDCVYKHT--NEDIKECNM 131
Query: 1979 FLKGYCADGDECRKKHS 1995
+ G+C +G +CR +H+
Sbjct: 132 YKLGFCPNGPDCRYRHA 148
>gi|224116602|ref|XP_002317344.1| predicted protein [Populus trichocarpa]
gi|222860409|gb|EEE97956.1| predicted protein [Populus trichocarpa]
Length = 722
Score = 58.9 bits (141), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYF-LQGLCTNKNCPYRHVHVNPNASTCEG 1978
VC +L+ LC D C H+ RMP C +F L G C ++C Y+H N + C
Sbjct: 79 VCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHT--NEDIKECNM 136
Query: 1979 FLKGYCADGDECRKKHS 1995
+ G+C +G +CR +H+
Sbjct: 137 YKLGFCPNGPDCRYRHA 153
>gi|322699105|gb|EFY90869.1| CCCH zinc finger protein [Metarhizium acridum CQMa 102]
Length = 415
Score = 58.9 bits (141), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 1957 CTNKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRL 2015
CT +CPY H P A CE F GYC G C ++H + CP F TG C C+L
Sbjct: 295 CTKADCPYTHSRAAPGALVCEAFGFYGYCDKGASCTERHVFECPDFSNTGICKTKG-CKL 353
Query: 2016 HH 2017
H
Sbjct: 354 LH 355
>gi|348689027|gb|EGZ28841.1| hypothetical protein PHYSODRAFT_476500 [Phytophthora sojae]
Length = 141
Score = 58.9 bits (141), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 28/49 (57%)
Query: 1946 MPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
+PDC FL+G CT C YRHV V+ A CE F GYC G C +H
Sbjct: 1 VPDCKMFLRGACTRDGCKYRHVKVSAAAKLCEPFTMGYCPKGGACTLRH 49
>gi|451853678|gb|EMD66971.1| hypothetical protein COCSADRAFT_283486 [Cochliobolus sativus ND90Pr]
Length = 255
Score = 58.9 bits (141), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 13/153 (8%)
Query: 1884 RLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIA---VCTKFLKGLCSNSD-CKLTH 1939
R L R C+ + + G C D KCP H+ S VC +L+GLC + C+ H
Sbjct: 38 RFGLNPDRPTCKAYLQ-GHC-PDGSKCPNKHNVSSSYNNLVCKHWLRGLCKKGETCEFLH 95
Query: 1940 KVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS-- 1995
+ RMP+CSY+ + C+N +C Y H+ + +C + +G+C G C KH+
Sbjct: 96 EYNLRRMPECSYYARTQTCSNGDDCLYLHLDPDAKRPSCPHYDRGFCPLGPHCALKHNKK 155
Query: 1996 -YVCPTFKATGSCALGAKCRL-HHPKSRSNGKK 2026
+CP F G C G C+ HP+ ++ KK
Sbjct: 156 DKLCP-FYLCGFCPEGKGCKYGAHPRYPTDLKK 187
>gi|410901545|ref|XP_003964256.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 6-like [Takifugu rubripes]
Length = 1131
Score = 58.9 bits (141), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 9/78 (11%)
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNA--STCEGFLKGYCADGDECRKKHS------YVCP 1999
C YFL+G C + C + H HV P+ C+ +L+GYC+ GD C H+ Y C
Sbjct: 296 CKYFLEGRCIKGDQCKFEHEHVVPDKKKELCKFYLQGYCSKGDNCIYMHNILQXYEYPCK 355
Query: 2000 TFKATGSCALGAKCRLHH 2017
F C G C+ H
Sbjct: 356 FFHTGAKCYQGDNCKFSH 373
Score = 51.6 bits (122), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHK-VIPERMPD-CSYFLQGLCT-NKNCPYRHVHVNPNASTC 1976
+C FL+G C D CK H+ V+P++ + C ++LQG C+ NC Y H + C
Sbjct: 295 ICKYFLEGRCIKGDQCKFEHEHVVPDKKKELCKFYLQGYCSKGDNCIYMHNILQXYEYPC 354
Query: 1977 EGFLKGY-CADGDECRKKHSYV 1997
+ F G C GD C+ H +
Sbjct: 355 KFFHTGAKCYQGDNCKFSHDAL 376
>gi|328856795|gb|EGG05915.1| hypothetical protein MELLADRAFT_29924 [Melampsora larici-populina
98AG31]
Length = 112
Score = 58.5 bits (140), Expect = 4e-05, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 10/115 (8%)
Query: 1911 PYIHDPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKN-CPYRHV 1967
P +H + VC +L+GLC + C+ H+ MP+C +F + G C+N + C Y HV
Sbjct: 1 PTLHAKT---VCKHWLRGLCKKGNSCEFLHEYNLRTMPECWFFGKYGFCSNGDECMYLHV 57
Query: 1968 HVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRL-HHPK 2019
C + +G+C+ G C +KH +C ++ G C G C HPK
Sbjct: 58 DERMRVLECMDYRRGFCSKGPTCSQKHIRRPICQSY-IIGFCPSGKNCNQGGHPK 111
>gi|344236286|gb|EGV92389.1| Putative cleavage and polyadenylation specificity factor subunit
4-like protein [Cricetulus griseus]
Length = 216
Score = 58.5 bits (140), Expect = 4e-05, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 46/103 (44%), Gaps = 10/103 (9%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDP-SKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C FF + G C K CP H+ KI VC +L+GLC D C H+ +RMP C
Sbjct: 41 CNFFAK-GLCEKGT-LCPLRHEKGEKIVVCKHWLRGLCRKGDCCNFLHQYDIDRMPVC-- 96
Query: 1952 FLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
+ C Y HVH C + G+C G +C+ H
Sbjct: 97 YFHSKFVGPLCKYHHVH----QVMCLNYFTGFCPKGPKCQFGH 135
Score = 48.1 bits (113), Expect = 0.062, Method: Composition-based stats.
Identities = 40/127 (31%), Positives = 55/127 (43%), Gaps = 10/127 (7%)
Query: 1915 DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQGLCTNKNC-PYRHVHVNPN 1972
D S AVC F KGLC C L H+ E++ C ++L+GLC +C + H +
Sbjct: 34 DKSNSAVCNFFAKGLCEKGTLCPLRHEK-GEKIVVCKHWLRGLCRKGDCCNFLHQYDIDR 92
Query: 1973 ASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSR-----SNGKKS 2027
C F + + H +C + TG C G KC+ HPK SN K S
Sbjct: 93 MPVCY-FHSKFVGPLCKYHHVHQVMCLNY-FTGFCPKGPKCQFGHPKMSQVLHPSNVKVS 150
Query: 2028 RRSRKPK 2034
R P+
Sbjct: 151 AELRVPQ 157
>gi|189203027|ref|XP_001937849.1| mRNA 3'-end-processing protein yth1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187984948|gb|EDU50436.1| mRNA 3'-end-processing protein yth1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 275
Score = 58.5 bits (140), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 74/153 (48%), Gaps = 13/153 (8%)
Query: 1884 RLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIA---VCTKFLKGLCSNSD-CKLTH 1939
R L R C+ + + G C D +CP H+ + VC +L+GLC + C+ H
Sbjct: 58 RFGLNPDRPTCKAYLQ-GHC-PDGNRCPNKHNVTSSYNNLVCKHWLRGLCKKGETCEFLH 115
Query: 1940 KVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS-- 1995
+ RMP+CSY+ + C+N +C Y H+ +C + +G+C G C KH+
Sbjct: 116 EYNLRRMPECSYYARTQTCSNGDDCLYLHIDPEAKRPSCPHYDRGFCPLGPHCSLKHNKK 175
Query: 1996 -YVCPTFKATGSCALGAKCRL-HHPKSRSNGKK 2026
+CP F G C G C+ HP+ ++ KK
Sbjct: 176 DKLCP-FYLCGFCPEGKGCKYGAHPRYPTDLKK 207
>gi|449481468|ref|XP_004156192.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Cucumis sativus]
Length = 379
Score = 58.5 bits (140), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYF-LQGLCTNKNCPYRHVHVNPNASTCEG 1978
VC +L+ LC D C H+ RMP C +F L G C ++C Y+H N + C
Sbjct: 79 VCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQDCVYKHT--NEDIKECNM 136
Query: 1979 FLKGYCADGDECRKKHS 1995
+ G+C +G +CR +H+
Sbjct: 137 YKFGFCPNGPDCRYRHA 153
>gi|397568946|gb|EJK46443.1| hypothetical protein THAOC_34888 [Thalassiosira oceanica]
Length = 444
Score = 58.5 bits (140), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 1915 DPSKIAVCTKFLKGL-CSNSDCKLTHKVIPE-RMPDCSYFLQ-GLC-TNKNCPYRHVHVN 1970
+PS+ +C F KGL C++ C H V E P C +F + G+C ++CP+RHV VN
Sbjct: 340 NPSETPICPTFRKGLPCNDPKCIYRHDVCSEASRPICVFFQRNGMCDKGEDCPFRHVKVN 399
Query: 1971 PNASTCEGFLK-GYC 1984
NA+ C F + GYC
Sbjct: 400 WNAAICPSFAQFGYC 414
>gi|219129643|ref|XP_002184993.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403488|gb|EEC43440.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 354
Score = 58.5 bits (140), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 1921 VCTKFLKG-LCSNSDCKLTHKVIPE-RMPDCSYFLQ-GLCTNKNCPYRHVHVNPNASTCE 1977
+C +L G LC++ C+ H V E +P C YF + G+C ++C +RHV VNP A C
Sbjct: 272 ICPTYLHGELCTDETCRKRHDVPTEFAVPTCLYFQRHGMCLKEDCCFRHVKVNPRALVCP 331
Query: 1978 GFLK-GYCAD 1986
F GYC D
Sbjct: 332 NFTNLGYCED 341
>gi|359077209|ref|XP_003587527.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation specific
factor 4-like [Bos taurus]
Length = 307
Score = 58.5 bits (140), Expect = 5e-05, Method: Composition-based stats.
Identities = 38/104 (36%), Positives = 49/104 (47%), Gaps = 13/104 (12%)
Query: 1894 CQFFTRFGKCNKDNGK-CPYIHDP-SKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSY 1951
C FFT+ G C K GK CP+ HD K VC K CK H+ RMP+C +
Sbjct: 190 CTFFTK-GLCEK--GKLCPFRHDRGEKPVVCKK-------GDQCKFLHQYDVARMPECHF 239
Query: 1952 -FLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
F G C NK P+ HV C + +G+C G C+ +H
Sbjct: 240 SFKSGDCNNKERPFLHVKPAFKTQHCPWYDRGFCKHGPLCKYRH 283
>gi|239792848|dbj|BAH72717.1| ACYPI007246 [Acyrthosiphon pisum]
Length = 148
Score = 58.2 bits (139), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C F+ + G C+K CP H + VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CSFYPK-GSCSK-GALCPMRHVRGDRTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 FLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCA 1985
+ + C NK CP+ H+ C + +G+ A
Sbjct: 99 YARFNACHNKECPFLHIDPESKLKDCPWYDRGFVA 133
>gi|326521084|dbj|BAJ96745.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 650
Score = 58.2 bits (139), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRHVHVNPNASTCEG 1978
VC +L+GLC D C H+ RMP C +F G C +C Y+H + + C
Sbjct: 60 VCRHWLRGLCMKGDACGFLHQFDKARMPVCRFFRDYGECREPDCAYKHSYDD--VKECNM 117
Query: 1979 FLKGYCADGDECRKKH 1994
+ G+C +G CR KH
Sbjct: 118 YKMGFCPNGPNCRYKH 133
>gi|302832461|ref|XP_002947795.1| hypothetical protein VOLCADRAFT_103576 [Volvox carteri f.
nagariensis]
gi|300267143|gb|EFJ51328.1| hypothetical protein VOLCADRAFT_103576 [Volvox carteri f.
nagariensis]
Length = 652
Score = 58.2 bits (139), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRHVHVNPNASTCEG 1978
VCT +L+GLC D C H+ + +RMP C L+ G C +++CPY+H C
Sbjct: 156 VCTYWLRGLCMKGDACGFLHQFVSDRMPVCRNLLKYGECHDQDCPYKHSL--DEIKECNM 213
Query: 1979 FLKGYCADGDECRKKH 1994
+ G+C G CR KH
Sbjct: 214 YKLGFCIYGPVCRYKH 229
Score = 42.0 bits (97), Expect = 4.2, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLK-GYCADGDECRKKHSY----VCPTFK 2002
C+Y+L+GLC + C + H V+ C LK G C D D C KHS C +K
Sbjct: 157 CTYWLRGLCMKGDACGFLHQFVSDRMPVCRNLLKYGECHDQD-CPYKHSLDEIKECNMYK 215
Query: 2003 ATGSCALGAKCRLHHPKS 2020
G C G CR H K+
Sbjct: 216 -LGFCIYGPVCRYKHIKN 232
>gi|358381473|gb|EHK19148.1| hypothetical protein TRIVIDRAFT_181899 [Trichoderma virens Gv29-8]
Length = 263
Score = 58.2 bits (139), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 7/105 (6%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCE 1977
VC +L+GLC + C+ H+ +MP+C++F++ G C+N + C Y HV C
Sbjct: 82 VCKHWLRGLCKKGEHCEFLHEYNLRKMPECNFFMRNGYCSNGEECLYLHVDPLSKLPPCP 141
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRL-HHPK 2019
+ G+C G C KKH +CP + A G C G +C+ HPK
Sbjct: 142 HYDMGFCPLGPLCSKKHVRRKLCPYYLA-GFCPDGLECKTGAHPK 185
>gi|393218484|gb|EJD03972.1| hypothetical protein FOMMEDRAFT_133331 [Fomitiporia mediterranea
MF3/22]
Length = 292
Score = 58.2 bits (139), Expect = 6e-05, Method: Composition-based stats.
Identities = 35/104 (33%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLC-TNKNCPYRHVHVNPNASTCE 1977
VC +L+GLC D C+ H+ RMP+C ++ + G C C Y H C
Sbjct: 92 VCKHWLRGLCKKGDACEFLHEYNLRRMPECWWYAKFGYCQAGDECLY--AHPKEKKIECP 149
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPK 2019
+ +G+C G C +KH C + TG C LG +C HPK
Sbjct: 150 DYKRGFCKLGPHCPRKHVRRVACQNY-LTGYCPLGPECTRGHPK 192
>gi|336365876|gb|EGN94225.1| hypothetical protein SERLA73DRAFT_78143 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378558|gb|EGO19716.1| hypothetical protein SERLADRAFT_453661 [Serpula lacrymans var.
lacrymans S7.9]
Length = 304
Score = 58.2 bits (139), Expect = 6e-05, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 53/120 (44%), Gaps = 6/120 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCT-NKNCPYRHVHVNPNASTCE 1977
VC +L+GLC D C+ H+ RMP+C +F + G C+ C Y H C
Sbjct: 94 VCKHWLRGLCKKGDACEFLHEYNLRRMPECWWFAKYGYCSAGDECLY--AHPKERRVECP 151
Query: 1978 GFLKGYCADGDECRKKH-SYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSRKPKNT 2036
+ +G+C G C +KH V TG C LG C HPK ++ P +T
Sbjct: 152 DYKRGFCKLGPTCPRKHVRRVACQLYLTGICPLGPDCPRGHPKPDLPSARAYEPPSPPST 211
>gi|353237438|emb|CCA69411.1| related to Cleavage and polyadenylation specificity factor
[Piriformospora indica DSM 11827]
Length = 290
Score = 57.8 bits (138), Expect = 6e-05, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 13/113 (11%)
Query: 1915 DPSKIA-VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCT-NKNCPYRHVHVN 1970
DP ++ VC +L+GLC SD C+ H+ RMP+C ++ + G C+ + C Y H
Sbjct: 90 DPRLMSTVCKHWLRGLCKKSDACEFLHEYNLRRMPECWWYAKNGFCSAGEECLYAH---- 145
Query: 1971 PNAS--TCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPK 2019
P S C + +G+C G +C +KH +C + G C G+ C HPK
Sbjct: 146 PKGSRVECPDYNRGFCKLGPDCPRKHVRRVICQLY-LNGFCPAGSSCPKGHPK 197
>gi|340518147|gb|EGR48389.1| predicted protein [Trichoderma reesei QM6a]
Length = 433
Score = 57.8 bits (138), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 7/112 (6%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCE 1977
VC +L+GLC + C+ H+ +MP+C++F++ G C+N + C Y HV C
Sbjct: 243 VCKHWLRGLCKKGEHCEFLHEYNLRKMPECNFFMRNGYCSNGEECLYLHVDPLSKLPPCP 302
Query: 1978 GFLKGYCADGDECRKKHSY--VCPTFKATGSCALGAKCRL-HHPKSRSNGKK 2026
+ G+C G C KKH +C F G C G +C++ HPK + +K
Sbjct: 303 HYDMGFCPLGPICSKKHVRRKLC-VFYLAGFCPDGPECKVGAHPKWSKDLEK 353
>gi|392597302|gb|EIW86624.1| hypothetical protein CONPUDRAFT_134023 [Coniophora puteana RWD-64-598
SS2]
Length = 292
Score = 57.8 bits (138), Expect = 6e-05, Method: Composition-based stats.
Identities = 35/104 (33%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCT-NKNCPYRHVHVNPNASTCE 1977
VC +L+GLC D C+ H+ RMP+C ++ + G C+ C Y H + C
Sbjct: 92 VCKHWLRGLCKKGDACEFLHEYNLRRMPECWWYAKYGYCSAGDECLY--AHPKERRAECP 149
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPK 2019
+ +G+C G C +KH C + TG C LG +C HPK
Sbjct: 150 DYRRGFCKLGPMCPRKHVRRVACQAY-LTGLCPLGPECPRGHPK 192
>gi|325182946|emb|CCA17401.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 772
Score = 57.8 bits (138), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 1920 AVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEG 1978
VC +L+GLC D C+ H+ +MP+C + ++ C CP+RHV + + C
Sbjct: 62 VVCRHWLRGLCMKGDSCEFLHQYDMSKMPECRWGME--CQVPECPFRHV-PDEDRMECAF 118
Query: 1979 FLKGYCADGDECRKKH 1994
+ +G+C+ G CR +H
Sbjct: 119 YRQGFCSHGPNCRYRH 134
Score = 47.8 bits (112), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 19/145 (13%)
Query: 1887 LARKRKYCQFFTRFGKCNKDNGKCPYIH--DPSKIAVCTKFLKGLCSNSDCKLTHKVIPE 1944
R C+ + R G C K + C ++H D SK+ C ++ C +C H +
Sbjct: 57 FKRGTVVCRHWLR-GLCMKGD-SCEFLHQYDMSKMPECRWGME--CQVPECPFRHVPDED 112
Query: 1945 RMPDCSYFLQGLCTN-KNCPYRHVHV--NPNASTCEGFLKGYCADGDECRKKHSY----- 1996
RM +C+++ QG C++ NC YRH+ + T + L+ A+ + +++ +
Sbjct: 113 RM-ECAFYRQGFCSHGPNCRYRHIKLAREECPETADFALQSKVAEEENVKRRKTQPVNEF 171
Query: 1997 ----VCPTFKATGSCALGAKCRLHH 2017
+C ++ GSC G +C H
Sbjct: 172 YKIAICKHWEKLGSCPFGDECHFAH 196
>gi|409051670|gb|EKM61146.1| hypothetical protein PHACADRAFT_134399 [Phanerochaete carnosa
HHB-10118-sp]
Length = 296
Score = 57.8 bits (138), Expect = 6e-05, Method: Composition-based stats.
Identities = 36/104 (34%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCT-NKNCPYRHVHVNPNASTCE 1977
VC +L+GLC D C+ H+ RMP+C ++ + G C+ C Y H C
Sbjct: 96 VCKHWLRGLCKKGDQCEFLHEYNLRRMPECWWYAKYGYCSAGDECLY--AHPKERRVECP 153
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPK 2019
+ +G+C G C +KH VC + TG C LG +C HPK
Sbjct: 154 DYNRGFCKLGPSCPRKHVRRVVCQNY-LTGFCPLGPECPRGHPK 196
>gi|46108144|ref|XP_381130.1| hypothetical protein FG00954.1 [Gibberella zeae PH-1]
Length = 411
Score = 57.8 bits (138), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKN-CPYRHVHVNPNASTCE 1977
VC +L+GLC + C+ H+ +MP+C++F++ G C+N + C Y H+ C
Sbjct: 234 VCKHWLRGLCKKGEHCEFLHEYNLRKMPECNFFMRNGYCSNGDECLYLHIDPQSRLPPCP 293
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRL-HHPK 2019
+ G+C G C KKH +C F G C G C+ HPK
Sbjct: 294 HYDMGFCPLGPNCSKKHVRRKLC-VFYLAGFCPDGPDCKEGAHPK 337
>gi|70990364|ref|XP_750031.1| mRNA cleavage and polyadenylation specificity factor complex subunit
[Aspergillus fumigatus Af293]
gi|74669991|sp|Q4WKD9.1|YTH1_ASPFU RecName: Full=mRNA 3'-end-processing protein yth1
gi|66847663|gb|EAL87993.1| mRNA cleavage and polyadenylation specificity factor complex subunit,
putative [Aspergillus fumigatus Af293]
gi|159130509|gb|EDP55622.1| mRNA cleavage and polyadenylation specificity factor complex subunit,
putative [Aspergillus fumigatus A1163]
Length = 254
Score = 57.8 bits (138), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 53/111 (47%), Gaps = 6/111 (5%)
Query: 1921 VCTKFLKGLCSNS-DCKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCE 1977
VC FLKGLC C+ H+ RMP+C F + G C N +C Y+HV CE
Sbjct: 91 VCKHFLKGLCKKGLKCEYLHEYNLRRMPECQSFSRSGYCPNGDDCLYQHVREQARLPPCE 150
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPKSRSNGKK 2026
+ +G+C G C K+H +C + A G C G C HP+ N K
Sbjct: 151 NYDQGFCELGPLCSKRHVRRRLCKYYLA-GFCPEGKACPDAHPRWSENLPK 200
>gi|430810962|emb|CCJ31506.1| unnamed protein product [Pneumocystis jirovecii]
Length = 250
Score = 57.8 bits (138), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 11/109 (10%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCE 1977
VC +L+GLC D C+ H+ ++MP+C +F + G C+N + C Y H+ + +C
Sbjct: 71 VCKHWLRGLCKKGDQCEFLHEYNLKKMPECRFFAKHGFCSNGEECLYLHIDPDSKVGSCP 130
Query: 1978 GFLKGYCADG-----DECRKKH--SYVCPTFKATGSCALGAKCRLHHPK 2019
++ G+C G +C +KH +C + TG C G +C HPK
Sbjct: 131 WYIMGFCPLGCFSIRPKCSQKHIRKTLCKLY-LTGFCPKGPECSNTHPK 178
>gi|389751127|gb|EIM92200.1| hypothetical protein STEHIDRAFT_47086 [Stereum hirsutum FP-91666 SS1]
Length = 296
Score = 57.8 bits (138), Expect = 7e-05, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCT-NKNCPYRHVHVNPNASTCE 1977
VC +L+GLC D C+ H+ RMP+C ++ + G C+ C Y H C
Sbjct: 94 VCKHWLRGLCKKGDACEFLHEYNLRRMPECWWYAKYGYCSAGDECLY--AHPKERKVECP 151
Query: 1978 GFLKGYCADGDECRKKH-SYVCPTFKATGSCALGAKCRLHHPK 2019
+ +G+C G +C +KH V TG C LG C HPK
Sbjct: 152 DYKRGFCKLGPKCPRKHIRRVACQLYLTGFCPLGPDCPRGHPK 194
>gi|449551266|gb|EMD42230.1| hypothetical protein CERSUDRAFT_110762 [Ceriporiopsis subvermispora
B]
Length = 282
Score = 57.4 bits (137), Expect = 8e-05, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCT-NKNCPYRHVHVNPNASTCE 1977
VC +L+GLC D C+ H+ RMP+C ++ + G C+ C Y H C
Sbjct: 94 VCKHWLRGLCKKGDACEFLHEYNLRRMPECWWYAKYGYCSAGDECLY--AHPKERRIECP 151
Query: 1978 GFLKGYCADGDECRKKH-SYVCPTFKATGSCALGAKCRLHHPK 2019
+ +G+C G C +KH V TG C LG +C HPK
Sbjct: 152 DYKRGFCKLGPTCPRKHVRRVACQLYLTGFCPLGPECPRGHPK 194
>gi|134055063|emb|CAK43704.1| unnamed protein product [Aspergillus niger]
Length = 264
Score = 57.4 bits (137), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 52/108 (48%), Gaps = 6/108 (5%)
Query: 1921 VCTKFLKGLCSNS-DCKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCE 1977
VC FLKGLC C+ H+ RMP+C F + G C N +C Y+HV CE
Sbjct: 79 VCKHFLKGLCKKGLKCEYLHEYNLRRMPECQSFSRSGYCPNGDDCLYQHVREQARLPPCE 138
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPKSRSN 2023
+ +G+C G C K+H +C + A G C G C HP+ N
Sbjct: 139 HYDRGFCELGPLCAKRHVRRRLCQYYLA-GFCPDGKACVDAHPRWSEN 185
>gi|302692746|ref|XP_003036052.1| hypothetical protein SCHCODRAFT_50301 [Schizophyllum commune H4-8]
gi|300109748|gb|EFJ01150.1| hypothetical protein SCHCODRAFT_50301 [Schizophyllum commune H4-8]
Length = 287
Score = 57.4 bits (137), Expect = 9e-05, Method: Composition-based stats.
Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 8/104 (7%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCT-NKNCPYRHVHVNPNASTCE 1977
VC +L+GLC D C+ H+ RMP+C ++ + G C+ C Y H C
Sbjct: 94 VCKHWLRGLCKKGDACEFLHEYNLRRMPECWWYAKYGYCSAGDECLY--AHPKERRVECP 151
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPK 2019
+ +G+C G C +KH C + TG C LG +C HPK
Sbjct: 152 DYKRGFCKLGPSCPRKHIRRIACQNY-LTGFCPLGPECPRGHPK 194
>gi|190899688|gb|ACE98357.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
gi|190899692|gb|ACE98359.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
gi|190899696|gb|ACE98361.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
gi|190899700|gb|ACE98363.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
gi|190899702|gb|ACE98364.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
gi|190899704|gb|ACE98365.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
gi|190899708|gb|ACE98367.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
gi|190899710|gb|ACE98368.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
gi|190899712|gb|ACE98369.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
gi|190899714|gb|ACE98370.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
gi|190899720|gb|ACE98373.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
gi|190899722|gb|ACE98374.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
gi|190899724|gb|ACE98375.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
gi|190899726|gb|ACE98376.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
gi|190899728|gb|ACE98377.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
gi|190899730|gb|ACE98378.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
gi|190899732|gb|ACE98379.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
gi|190899734|gb|ACE98380.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
Length = 118
Score = 57.4 bits (137), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYF-LQGLCTNKNCPYRHVHVNPNASTCEG 1978
VC +L+ LC D C H+ RMP C +F L G C ++C Y+H N + C
Sbjct: 44 VCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHT--NEDIKECNM 101
Query: 1979 FLKGYCADGDECRKKHS 1995
+ G+C +G +CR +H+
Sbjct: 102 YKLGFCPNGPDCRYRHA 118
>gi|190899694|gb|ACE98360.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
Length = 118
Score = 57.4 bits (137), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYF-LQGLCTNKNCPYRHVHVNPNASTCEG 1978
VC +L+ LC D C H+ RMP C +F L G C ++C Y+H N + C
Sbjct: 44 VCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHT--NEDIKECNM 101
Query: 1979 FLKGYCADGDECRKKHS 1995
+ G+C +G +CR +H+
Sbjct: 102 YKLGFCPNGPDCRYRHA 118
>gi|348507314|ref|XP_003441201.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like
[Oreochromis niloticus]
Length = 1133
Score = 57.4 bits (137), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 1949 CSYFLQGLCTN-KNCPYRHVHVNPNA--STCEGFLKGYCADGDECRKKHS-YVCPTFKAT 2004
C YFL+G C + C + H V P+ C+ +L+GYC+ GD C H+ Y C F
Sbjct: 300 CKYFLEGRCIKGEQCKFEHELVVPDKKKELCKFYLQGYCSKGDNCIYMHNEYPCKFFHTG 359
Query: 2005 GSCALGAKCRLHH 2017
C G C+ H
Sbjct: 360 AKCYQGDNCKFSH 372
>gi|358366860|dbj|GAA83480.1| mRNA cleavage and polyadenylation specificity factor complex subunit
[Aspergillus kawachii IFO 4308]
Length = 254
Score = 57.0 bits (136), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 52/108 (48%), Gaps = 6/108 (5%)
Query: 1921 VCTKFLKGLCSNS-DCKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCE 1977
VC FLKGLC C+ H+ RMP+C F + G C N +C Y+HV CE
Sbjct: 91 VCKHFLKGLCKKGLKCEYLHEYNLRRMPECQSFSRSGYCPNGDDCLYQHVREQARLPPCE 150
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPKSRSN 2023
+ +G+C G C K+H +C + A G C G C HP+ N
Sbjct: 151 HYDRGFCELGPLCAKRHVRRRLCQYYLA-GFCPDGKACVDAHPRWSEN 197
>gi|317026097|ref|XP_001388960.2| mRNA 3'-end-processing protein yth1 [Aspergillus niger CBS 513.88]
Length = 255
Score = 57.0 bits (136), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 52/108 (48%), Gaps = 6/108 (5%)
Query: 1921 VCTKFLKGLCSNS-DCKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCE 1977
VC FLKGLC C+ H+ RMP+C F + G C N +C Y+HV CE
Sbjct: 91 VCKHFLKGLCKKGLKCEYLHEYNLRRMPECQSFSRSGYCPNGDDCLYQHVREQARLPPCE 150
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPKSRSN 2023
+ +G+C G C K+H +C + A G C G C HP+ N
Sbjct: 151 HYDRGFCELGPLCAKRHVRRRLCQYYLA-GFCPDGKACVDAHPRWSEN 197
>gi|302923751|ref|XP_003053742.1| hypothetical protein NECHADRAFT_75190 [Nectria haematococca mpVI
77-13-4]
gi|256734683|gb|EEU48029.1| hypothetical protein NECHADRAFT_75190 [Nectria haematococca mpVI
77-13-4]
Length = 258
Score = 57.0 bits (136), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 7/112 (6%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKN-CPYRHVHVNPNASTCE 1977
VC +L+GLC + C+ H+ +MP+C++F++ G C+N + C Y H+ C
Sbjct: 78 VCKHWLRGLCKKGEHCEFLHEYNLRKMPECNFFMRNGYCSNGDECLYLHIDPQSRLPPCP 137
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRL-HHPKSRSNGKK 2026
+ G+C G C KKH +C F G C G C+ HPK N +K
Sbjct: 138 HYDMGFCPLGPNCSKKHVRRKLC-GFYLAGFCPDGPDCKEGAHPKWSKNLEK 188
>gi|409083443|gb|EKM83800.1| hypothetical protein AGABI1DRAFT_33150 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 290
Score = 57.0 bits (136), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCT-NKNCPYRHVHVNPNASTCE 1977
VC +L+GLC D C+ H+ RMP+C +F + G C+ C Y H C
Sbjct: 94 VCKHWLRGLCKKGDACEFLHEYNLRRMPECYWFAKYGYCSAGDECLY--AHPKERKIECP 151
Query: 1978 GFLKGYCADGDECRKKH-SYVCPTFKATGSCALGAKCRLHHPK 2019
+ +G+C G C +KH V TG C +G +C HPK
Sbjct: 152 DYNRGFCKLGPICPRKHVRKVACQLYLTGFCPMGPECPRGHPK 194
>gi|350638104|gb|EHA26460.1| hypothetical protein ASPNIDRAFT_170141 [Aspergillus niger ATCC 1015]
Length = 206
Score = 57.0 bits (136), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 52/108 (48%), Gaps = 6/108 (5%)
Query: 1921 VCTKFLKGLCSNS-DCKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCE 1977
VC FLKGLC C+ H+ RMP+C F + G C N +C Y+HV CE
Sbjct: 91 VCKHFLKGLCKKGLKCEYLHEYNLRRMPECQSFSRSGYCPNGDDCLYQHVREQARLPPCE 150
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPKSRSN 2023
+ +G+C G C K+H +C + A G C G C HP+ N
Sbjct: 151 HYDRGFCELGPLCAKRHVRRRLCQYYLA-GFCPDGKACVDAHPRWSEN 197
>gi|426201512|gb|EKV51435.1| hypothetical protein AGABI2DRAFT_62161 [Agaricus bisporus var.
bisporus H97]
Length = 290
Score = 57.0 bits (136), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCT-NKNCPYRHVHVNPNASTCE 1977
VC +L+GLC D C+ H+ RMP+C +F + G C+ C Y H C
Sbjct: 94 VCKHWLRGLCKKGDACEFLHEYNLRRMPECYWFAKYGYCSAGDECLY--AHPKERKIECP 151
Query: 1978 GFLKGYCADGDECRKKH-SYVCPTFKATGSCALGAKCRLHHPK 2019
+ +G+C G C +KH V TG C +G +C HPK
Sbjct: 152 DYNRGFCKLGPICPRKHVRKVACQLYLTGFCPMGPECPRGHPK 194
>gi|392571211|gb|EIW64383.1| hypothetical protein TRAVEDRAFT_158581 [Trametes versicolor FP-101664
SS1]
Length = 280
Score = 57.0 bits (136), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCT-NKNCPYRHVHVNPNASTCE 1977
VC +L+GLC D C+ H+ RMP+C ++ + G C+ C Y H C
Sbjct: 90 VCKHWLRGLCKKGDACEFLHEYNLRRMPECWWYAKYGYCSAGDECLY--AHPKERRVECP 147
Query: 1978 GFLKGYCADGDECRKKH-SYVCPTFKATGSCALGAKCRLHHPK 2019
+ +G+C G C +KH V TG C LG C HPK
Sbjct: 148 DYNRGFCKLGPTCPRKHVRRVACQLYLTGFCPLGPDCPRGHPK 190
>gi|328871096|gb|EGG19467.1| CCCH-type zinc finger-containing protein [Dictyostelium fasciculatum]
Length = 286
Score = 56.6 bits (135), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 1949 CSYFLQGLCTN-KNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSY------VCPTF 2001
C +FL+G CT +CP++H +A C+ +L+G C GD C H Y C F
Sbjct: 59 CRFFLKGNCTKGPDCPFKHTKTE-HAVVCKHWLRGLCKKGDLCEFLHEYDLAKMPECYFF 117
Query: 2002 KATGSCALGAKCRLHHPK 2019
G C G KC+ HPK
Sbjct: 118 SKYGFCPEGPKCKYGHPK 135
Score = 47.8 bits (112), Expect = 0.077, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDPSKIAV-CTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + G C K CP+ H ++ AV C +L+GLC D C+ H+ +MP+C +
Sbjct: 59 CRFFLK-GNCTK-GPDCPFKHTKTEHAVVCKHWLRGLCKKGDLCEFLHEYDLAKMPECYF 116
Query: 1952 FLQ-GLC-TNKNCPYRH 1966
F + G C C Y H
Sbjct: 117 FSKYGFCPEGPKCKYGH 133
>gi|432906538|ref|XP_004077579.1| PREDICTED: uncharacterized protein LOC101161746 [Oryzias latipes]
Length = 1072
Score = 56.6 bits (135), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 1949 CSYFLQGLCT-NKNCPYRHVHVNPNA--STCEGFLKGYCADGDECRKKHS-YVCPTFKAT 2004
C YFL+G C + C + H V P+ C+ +L+GYC+ GD C H+ Y C F
Sbjct: 290 CKYFLEGRCIKGEQCKFEHELVVPDKKKELCKFYLQGYCSKGDHCIYMHNEYPCKFFHTG 349
Query: 2005 GSCALGAKCRLHH 2017
C G C+ H
Sbjct: 350 AKCYQGDNCKFSH 362
>gi|346972208|gb|EGY15660.1| mRNA 3'-end-processing protein YTH1 [Verticillium dahliae VdLs.17]
Length = 395
Score = 56.6 bits (135), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 7/114 (6%)
Query: 1921 VCTKFLKGLCSN-SDCKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCE 1977
VC +L+GLC + C+ H+ +MP+C++F + G C+N + C Y H+ C
Sbjct: 203 VCKHWLRGLCKKGAHCEFLHEYNLRKMPECNFFTRNGYCSNGEECLYLHIDPQSKLPPCP 262
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRL-HHPKSRSNGKKSR 2028
+ G+C G C KKH +C F G C G CR HP+ R + ++ +
Sbjct: 263 HYDMGFCPLGPACAKKHVRRALC-LFYLAGFCPAGRDCRDGAHPRWRKDLERPK 315
>gi|395334665|gb|EJF67041.1| hypothetical protein DICSQDRAFT_96073 [Dichomitus squalens LYAD-421
SS1]
Length = 283
Score = 56.6 bits (135), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCT-NKNCPYRHVHVNPNASTCE 1977
VC +L+GLC D C+ H+ RMP+C ++ + G C+ C Y H C
Sbjct: 91 VCKHWLRGLCKKGDACEFLHEYNLRRMPECWWYAKYGYCSAGDECLY--AHPKERKVECP 148
Query: 1978 GFLKGYCADGDECRKKH-SYVCPTFKATGSCALGAKCRLHHPK 2019
+ +G+C G C +KH V TG C LG C HPK
Sbjct: 149 DYNRGFCRLGPNCPRKHVRRVACQLYLTGFCPLGPDCPRGHPK 191
>gi|190899698|gb|ACE98362.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
gi|190899706|gb|ACE98366.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
gi|190899716|gb|ACE98371.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
Length = 118
Score = 56.6 bits (135), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYF-LQGLCTNKNCPYRHVHVNPNASTCEG 1978
VC +L+ LC D C H+ RMP C +F L G C ++C Y+H N + C
Sbjct: 44 VCRHWLRSLCMKGDACGCLHQYDKSRMPVCRFFRLYGECREQDCVYKHT--NEDIKECNM 101
Query: 1979 FLKGYCADGDECRKKHS 1995
+ G+C +G +CR +H+
Sbjct: 102 YKLGFCPNGPDCRYRHA 118
>gi|119497215|ref|XP_001265370.1| mRNA cleavage and polyadenylation specificity factor complex subunit,
putative [Neosartorya fischeri NRRL 181]
gi|119413532|gb|EAW23473.1| mRNA cleavage and polyadenylation specificity factor complex subunit,
putative [Neosartorya fischeri NRRL 181]
Length = 254
Score = 56.6 bits (135), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 52/111 (46%), Gaps = 6/111 (5%)
Query: 1921 VCTKFLKGLCSNS-DCKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCE 1977
VC FLKGLC C+ H+ RMP+C F + G C N +C Y+HV CE
Sbjct: 91 VCKHFLKGLCKKGLKCEYLHEYNLRRMPECQSFSRSGYCPNGDDCLYQHVREQARLPPCE 150
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPKSRSNGKK 2026
+ +G+C G C K+H +C + A G C G C HP N K
Sbjct: 151 NYDQGFCELGPLCAKRHVRRRLCKYYLA-GFCPEGKACPDAHPHWSENLPK 200
>gi|336464161|gb|EGO52401.1| hypothetical protein NEUTE1DRAFT_125898 [Neurospora tetrasperma FGSC
2508]
Length = 317
Score = 56.6 bits (135), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKN-CPYRHVHVNPNASTCE 1977
VC +L+GLC + C+ H+ +MP+C++F++ G C+N + C Y H+ C
Sbjct: 98 VCKHWLRGLCKKGESCEFLHEYNLRKMPECNFFVRNGYCSNGDECLYLHIDPLSRLPPCP 157
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRL-HHPK 2019
+ +G+C G C KKH +C + A G C G C+ HP+
Sbjct: 158 HYERGFCPLGPRCDKKHFRRKLCLYYLA-GFCPDGKGCKEGAHPR 201
Score = 43.9 bits (102), Expect = 0.96, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDPS--KIAVCTKFLK-GLCSNSD-CKLTHKVIPERMPDC 1949
C+ + R G C K C ++H+ + K+ C F++ G CSN D C H R+P C
Sbjct: 99 CKHWLR-GLCKKGE-SCEFLHEYNLRKMPECNFFVRNGYCSNGDECLYLHIDPLSRLPPC 156
Query: 1950 SYFLQGLCT-NKNCPYRHVHVNPNASTCEGFLKGYCADGDECRK 1992
++ +G C C +H C +L G+C DG C++
Sbjct: 157 PHYERGFCPLGPRCDKKHFR----RKLCLYYLAGFCPDGKGCKE 196
>gi|350296243|gb|EGZ77220.1| hypothetical protein NEUTE2DRAFT_99830 [Neurospora tetrasperma FGSC
2509]
Length = 312
Score = 56.6 bits (135), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKN-CPYRHVHVNPNASTCE 1977
VC +L+GLC + C+ H+ +MP+C++F++ G C+N + C Y H+ C
Sbjct: 98 VCKHWLRGLCKKGESCEFLHEYNLRKMPECNFFVRNGYCSNGDECLYLHIDPLSRLPPCP 157
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRL-HHPK 2019
+ +G+C G C KKH +C + A G C G C+ HP+
Sbjct: 158 HYERGFCPLGPRCDKKHFRRKLCLYYLA-GFCPDGKGCKEGAHPR 201
Score = 43.9 bits (102), Expect = 0.98, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDPS--KIAVCTKFLK-GLCSNSD-CKLTHKVIPERMPDC 1949
C+ + R G C K C ++H+ + K+ C F++ G CSN D C H R+P C
Sbjct: 99 CKHWLR-GLCKKGE-SCEFLHEYNLRKMPECNFFVRNGYCSNGDECLYLHIDPLSRLPPC 156
Query: 1950 SYFLQGLCT-NKNCPYRHVHVNPNASTCEGFLKGYCADGDECRK 1992
++ +G C C +H C +L G+C DG C++
Sbjct: 157 PHYERGFCPLGPRCDKKHFR----RKLCLYYLAGFCPDGKGCKE 196
>gi|85117432|ref|XP_965256.1| hypothetical protein NCU08353 [Neurospora crassa OR74A]
gi|74618745|sp|Q7SGR2.1|YTH1_NEUCR RecName: Full=mRNA 3'-end-processing protein yth-1
gi|28927062|gb|EAA36020.1| hypothetical protein NCU08353 [Neurospora crassa OR74A]
Length = 317
Score = 56.6 bits (135), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKN-CPYRHVHVNPNASTCE 1977
VC +L+GLC + C+ H+ +MP+C++F++ G C+N + C Y H+ C
Sbjct: 98 VCKHWLRGLCKKGESCEFLHEYNLRKMPECNFFVRNGYCSNGDECLYLHIDPLSRLPPCP 157
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRL-HHPK 2019
+ +G+C G C KKH +C + A G C G C+ HP+
Sbjct: 158 HYERGFCPLGPRCDKKHFRRKLCLYYLA-GFCPDGKGCKEGAHPR 201
Score = 43.9 bits (102), Expect = 0.98, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDPS--KIAVCTKFLK-GLCSNSD-CKLTHKVIPERMPDC 1949
C+ + R G C K C ++H+ + K+ C F++ G CSN D C H R+P C
Sbjct: 99 CKHWLR-GLCKKGE-SCEFLHEYNLRKMPECNFFVRNGYCSNGDECLYLHIDPLSRLPPC 156
Query: 1950 SYFLQGLCT-NKNCPYRHVHVNPNASTCEGFLKGYCADGDECRK 1992
++ +G C C +H C +L G+C DG C++
Sbjct: 157 PHYERGFCPLGPRCDKKHFR----RKLCLYYLAGFCPDGKGCKE 196
>gi|342878227|gb|EGU79582.1| hypothetical protein FOXB_09865 [Fusarium oxysporum Fo5176]
Length = 252
Score = 56.6 bits (135), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKN-CPYRHVHVNPNASTCE 1977
VC +L+GLC + C+ H+ +MP+C++F++ G C+N + C Y H+ C
Sbjct: 78 VCKHWLRGLCKKGEHCEFLHEYNLRKMPECNFFMRNGYCSNGDECLYLHIDPQSRLPPCP 137
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRL-HHPK 2019
+ G+C G C KKH +C F G C G +C+ HPK
Sbjct: 138 HYDMGFCPLGPNCSKKHVRRKLC-VFYLAGFCPDGPECKEGAHPK 181
>gi|52076625|dbj|BAD45526.1| zinc finger (C3HC4-type RING finger) protein-like [Oryza sativa
Japonica Group]
gi|52076911|dbj|BAD45923.1| zinc finger (C3HC4-type RING finger) protein-like [Oryza sativa
Japonica Group]
Length = 678
Score = 56.2 bits (134), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRHVHVNPNASTCEG 1978
VC +L+GLC + C H+ RMP C +F G C +C Y+H + + C
Sbjct: 63 VCRHWLRGLCMKGEACGFLHQFDKARMPVCRFFRDFGECREPDCAYKHSYDD--VKECNM 120
Query: 1979 FLKGYCADGDECRKKH 1994
+ G+C +G CR KH
Sbjct: 121 YKMGFCPNGPNCRYKH 136
>gi|336276075|ref|XP_003352791.1| hypothetical protein SMAC_01625 [Sordaria macrospora k-hell]
gi|380094679|emb|CCC08061.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 321
Score = 56.2 bits (134), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKN-CPYRHVHVNPNASTCE 1977
VC +L+GLC + C+ H+ +MP+C++F++ G C+N + C Y H+ C
Sbjct: 101 VCKHWLRGLCKKGESCEFLHEYNLRKMPECNFFVRNGYCSNGDECLYLHIDPLSRLPPCP 160
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRL-HHPK 2019
+ +G+C G C KKH +C + A G C G C+ HP+
Sbjct: 161 HYERGFCPLGPRCDKKHFRRKLCLYYLA-GFCPDGKLCKEGAHPR 204
>gi|358390563|gb|EHK39968.1| hypothetical protein TRIATDRAFT_302483 [Trichoderma atroviride IMI
206040]
Length = 272
Score = 56.2 bits (134), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCE 1977
VC +L+GLC + C+ H+ +MP+C++F++ G C+N + C Y HV C
Sbjct: 94 VCKHWLRGLCKKGEQCEFLHEYNLRKMPECNFFMRNGYCSNGEECLYLHVDPLSKLPPCP 153
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRL-HHPK 2019
+ G+C G C KKH +C + G C G +C++ HPK
Sbjct: 154 HYDMGFCPLGPLCAKKHVRRKLC-VYYLAGFCPDGPECKMGSHPK 197
>gi|403418466|emb|CCM05166.1| predicted protein [Fibroporia radiculosa]
Length = 281
Score = 56.2 bits (134), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCT-NKNCPYRHVHVNPNASTCE 1977
VC +L+GLC D C+ H+ RMP+C ++ + G C+ C Y H C
Sbjct: 98 VCKHWLRGLCKKGDACEFLHEYNLRRMPECWWYAKYGYCSAGDECLY--AHPKERRIECP 155
Query: 1978 GFLKGYCADGDECRKKH-SYVCPTFKATGSCALGAKCRLHHPK 2019
+ +G+C G C +KH V TG C +G C HPK
Sbjct: 156 DYNRGFCQLGPTCPRKHVRRVACQLYLTGFCPMGPDCARGHPK 198
>gi|357123412|ref|XP_003563404.1| PREDICTED: zinc finger CCCH domain-containing protein 45-like
[Brachypodium distachyon]
Length = 653
Score = 56.2 bits (134), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRHVHVNPNASTCEG 1978
VC +L+GLC + C H+ RMP C +F G C +C Y+H + + C
Sbjct: 56 VCRHWLRGLCMKGEACGFLHQFDKARMPVCRFFRDFGECREPDCAYKHSYDD--VKECNM 113
Query: 1979 FLKGYCADGDECRKKH 1994
+ G+C +G CR KH
Sbjct: 114 YKMGFCPNGPHCRYKH 129
>gi|242093910|ref|XP_002437445.1| hypothetical protein SORBIDRAFT_10g027200 [Sorghum bicolor]
gi|241915668|gb|EER88812.1| hypothetical protein SORBIDRAFT_10g027200 [Sorghum bicolor]
Length = 645
Score = 56.2 bits (134), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRHVHVNPNASTCEG 1978
VC +L+GLC + C H+ RMP C +F G C +C Y+H + + C
Sbjct: 61 VCRHWLRGLCMKGEACGFLHQFDKARMPVCRFFRDFGECREPDCAYKHSYDD--VKECNM 118
Query: 1979 FLKGYCADGDECRKKH 1994
+ G+C +G CR KH
Sbjct: 119 YKMGFCPNGPNCRYKH 134
>gi|302695329|ref|XP_003037343.1| hypothetical protein SCHCODRAFT_13540 [Schizophyllum commune H4-8]
gi|300111040|gb|EFJ02441.1| hypothetical protein SCHCODRAFT_13540 [Schizophyllum commune H4-8]
Length = 287
Score = 56.2 bits (134), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 6/103 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCT-NKNCPYRHVHVNPNASTCE 1977
VC +L+GLC D C+ H+ RMP+C ++ + G C+ C Y H C
Sbjct: 94 VCKHWLRGLCKKGDACEFLHEYNLRRMPECWWYAKYGYCSAGDECLY--AHPKERKVECP 151
Query: 1978 GFLKGYCADGDECRKKH-SYVCPTFKATGSCALGAKCRLHHPK 2019
+ +G+C G C +KH + TG C +G C HPK
Sbjct: 152 DYKRGFCKLGPSCPRKHIRRIACQLYLTGFCPMGPDCPRGHPK 194
>gi|346320313|gb|EGX89914.1| high-affinity glucose transporter, putative [Cordyceps militaris
CM01]
Length = 293
Score = 56.2 bits (134), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 1921 VCTKFLKGLCSNS-DCKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCE 1977
VC +L+GLC C+ H+ +MP+C++F++ G C+N + C Y HV C
Sbjct: 99 VCKHWLRGLCKKGVPCEFLHEYNLRKMPECNFFMRNGYCSNGEECLYLHVDPLSKLPPCP 158
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRL-HHPK 2019
+ G+C G C KKH +C F G C G +CR HPK
Sbjct: 159 HYDMGFCPLGPVCAKKHVRRKLC-AFYLAGFCPEGPECRRGSHPK 202
>gi|115469520|ref|NP_001058359.1| Os06g0677700 [Oryza sativa Japonica Group]
gi|122167909|sp|Q0DA50.1|C3H45_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 45;
Short=OsC3H45
gi|113596399|dbj|BAF20273.1| Os06g0677700 [Oryza sativa Japonica Group]
Length = 665
Score = 56.2 bits (134), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRHVHVNPNASTCEG 1978
VC +L+GLC + C H+ RMP C +F G C +C Y+H + + C
Sbjct: 63 VCRHWLRGLCMKGEACGFLHQFDKARMPVCRFFRDFGECREPDCAYKHSYDD--VKECNM 120
Query: 1979 FLKGYCADGDECRKKH 1994
+ G+C +G CR KH
Sbjct: 121 YKMGFCPNGPNCRYKH 136
>gi|405118334|gb|AFR93108.1| no arches protein [Cryptococcus neoformans var. grubii H99]
Length = 332
Score = 56.2 bits (134), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/106 (33%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Query: 1918 KIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFL-QGLCT-NKNCPYRHVHVNPNAS 1974
K+ VC +L+ LC D C+ TH MP+C +F+ QG C C Y H
Sbjct: 95 KLTVCKHYLRNLCKMGDNCEYTHDFNLRTMPECIWFVKQGKCELGGECLY--FHPRDRRV 152
Query: 1975 TCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHP 2018
C + +G+C G C +KH +C + A G C G C+L HP
Sbjct: 153 ECPDYNRGFCVLGPNCPRKHIRRRLCDAY-AAGFCPDGKDCKLAHP 197
>gi|321252264|ref|XP_003192345.1| essential RNA-binding component of cleavage and polyadenylation
factor; Yth1p [Cryptococcus gattii WM276]
gi|317458813|gb|ADV20558.1| Essential RNA-binding component of cleavage and polyadenylation
factor, putative; Yth1p [Cryptococcus gattii WM276]
Length = 332
Score = 56.2 bits (134), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/106 (33%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Query: 1918 KIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFL-QGLCT-NKNCPYRHVHVNPNAS 1974
K+ VC +L+ LC D C+ TH MP+C +F+ QG C C Y H
Sbjct: 95 KLTVCKHYLRNLCKMGDNCEYTHDFNLRTMPECIWFVKQGKCELGGECLY--FHPRDRRV 152
Query: 1975 TCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHP 2018
C + +G+C G C +KH +C + A G C G C+L HP
Sbjct: 153 ECPDYNRGFCVLGPNCPRKHIRRRMCEAY-AAGFCPDGRDCKLAHP 197
>gi|154420502|ref|XP_001583266.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121917506|gb|EAY22280.1| hypothetical protein TVAG_094550 [Trichomonas vaginalis G3]
Length = 166
Score = 55.8 bits (133), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNK-NCPYRHVHVNPNASTCE 1977
VC K++ C + D C+ H+ ++M C ++ + C+NK C +RH + + C+
Sbjct: 52 VCDKWINTHCVHGDRCQSLHEYNIDKMKKCQFWEKFHECSNKFECIFRHELTDRIGTECK 111
Query: 1978 GFLKGYCADGDECRKKHS---YVCPTFKATGSCALGAKCRLHHPK 2019
+ G+C GD+C +KH+ +C + A G C G +C HPK
Sbjct: 112 YYNSGFCKHGDKCNRKHTPRDAICLNYLA-GFCPDGPRCLFAHPK 155
>gi|378727782|gb|EHY54241.1| hypothetical protein HMPREF1120_02412 [Exophiala dermatitidis
NIH/UT8656]
Length = 243
Score = 55.8 bits (133), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKN-CPYRHVHVNPNASTCE 1977
VC +LKGLC D C H+ +M +C +F Q G C N + C Y HV + CE
Sbjct: 88 VCKHWLKGLCKKGDTCDYLHEYNLRKMSECQFFNQNGYCQNGDECLYVHVKEDSKLPLCE 147
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCR 2014
+ +G+C G C K+H +C F G C G C+
Sbjct: 148 DYNRGFCEKGPRCGKRHVRRKLC-EFYLAGFCPDGPNCK 185
>gi|295663621|ref|XP_002792363.1| mRNA 3'-end-processing protein yth1 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226279033|gb|EEH34599.1| mRNA 3'-end-processing protein yth1 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 250
Score = 55.8 bits (133), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 1921 VCTKFLKGLCSNS-DCKLTHKVIPERMPDCSYFLQ-GLCTNKN-CPYRHVHVNPNASTCE 1977
VC FLKGLC C+ H+ RMP+C F + G C N + C Y+HV CE
Sbjct: 87 VCKHFLKGLCKKGIKCEYLHEYNLRRMPECQNFARTGYCPNGDECLYQHVPEEAKVPPCE 146
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKC 2013
+ +G+C G C KKH +C F G C G C
Sbjct: 147 HYERGFCELGPLCAKKHVRKKLC-RFYLAGFCPEGRAC 183
>gi|390604805|gb|EIN14196.1| hypothetical protein PUNSTDRAFT_49022 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 286
Score = 55.5 bits (132), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 6/105 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCT-NKNCPYRHVHVNPNASTCE 1977
VC +L+GLC D C+ H+ RMP+C ++ + G C+ C Y H C
Sbjct: 93 VCKHWLRGLCKKGDACEFLHEYNLRRMPECWWYAKYGYCSAGDECLY--AHPKERKIECP 150
Query: 1978 GFLKGYCADGDECRKKH-SYVCPTFKATGSCALGAKCRLHHPKSR 2021
+ +G+C G C +KH V +G C +G C HPK +
Sbjct: 151 DYRRGFCKLGPTCPRKHIRRVACQLYLSGFCPMGPDCPRGHPKPQ 195
Score = 40.8 bits (94), Expect = 9.6, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 33/85 (38%), Gaps = 24/85 (28%)
Query: 1961 NCPYRHVHVNPN------------------ASTCEGFLKGYCADGDECRKKHSY------ 1996
+CP RH +P A+ C+ +L+G C GD C H Y
Sbjct: 61 HCPLRHTTPSPANFQPPKQLPTHPRDRERLATVCKHWLRGLCKKGDACEFLHEYNLRRMP 120
Query: 1997 VCPTFKATGSCALGAKCRLHHPKSR 2021
C + G C+ G +C HPK R
Sbjct: 121 ECWWYAKYGYCSAGDECLYAHPKER 145
>gi|225677852|gb|EEH16136.1| mRNA 3'-end-processing protein yth1 [Paracoccidioides brasiliensis
Pb03]
gi|226287412|gb|EEH42925.1| mRNA 3'-end-processing protein yth1 [Paracoccidioides brasiliensis
Pb18]
Length = 250
Score = 55.5 bits (132), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 1921 VCTKFLKGLCSNS-DCKLTHKVIPERMPDCSYFLQ-GLCTNKN-CPYRHVHVNPNASTCE 1977
VC FLKGLC C+ H+ RMP+C F + G C N + C Y+HV CE
Sbjct: 87 VCKHFLKGLCKKGIKCEYLHEYNLRRMPECQNFARTGYCPNGDECLYQHVPEEAKLPPCE 146
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKC 2013
+ +G+C G C KKH +C F G C G C
Sbjct: 147 HYERGFCELGPLCAKKHVRKKLC-RFYLAGFCPEGRAC 183
>gi|410516933|sp|Q4IPA4.2|YTH1_GIBZE RecName: Full=mRNA 3'-end-processing protein YTH1
gi|408399218|gb|EKJ78341.1| hypothetical protein FPSE_01446 [Fusarium pseudograminearum CS3096]
Length = 255
Score = 55.5 bits (132), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKN-CPYRHVHVNPNASTCE 1977
VC +L+GLC + C+ H+ +MP+C++F++ G C+N + C Y H+ C
Sbjct: 78 VCKHWLRGLCKKGEHCEFLHEYNLRKMPECNFFMRNGYCSNGDECLYLHIDPQSRLPPCP 137
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRL-HHPK 2019
+ G+C G C KKH +C F G C G C+ HPK
Sbjct: 138 HYDMGFCPLGPNCSKKHVRRKLC-VFYLAGFCPDGPDCKEGAHPK 181
>gi|326529119|dbj|BAK00953.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 262
Score = 55.1 bits (131), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRHVHVNPNASTCEG 1978
VC +L+GLC D C H+ RMP C +F G C +C Y+H + + C
Sbjct: 60 VCRHWLRGLCMKGDACGFLHQFDKARMPVCRFFRDYGECREPDCAYKHSYDD--VKECNM 117
Query: 1979 FLKGYCADGDECRKKH 1994
+ G+C +G CR KH
Sbjct: 118 YKMGFCPNGPNCRYKH 133
>gi|299755658|ref|XP_002912126.1| no arches protein [Coprinopsis cinerea okayama7#130]
gi|298411323|gb|EFI28632.1| no arches protein [Coprinopsis cinerea okayama7#130]
Length = 278
Score = 55.1 bits (131), Expect = 4e-04, Method: Composition-based stats.
Identities = 35/105 (33%), Positives = 49/105 (46%), Gaps = 6/105 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCT-NKNCPYRHVHVNPNASTCE 1977
VC +L+GLC D C+ H+ RMP+C +F + G C+ C Y H C
Sbjct: 93 VCKHWLRGLCKKGDACEFLHEYNLRRMPECWWFAKYGYCSAGDECLY--AHPKERRIECP 150
Query: 1978 GFLKGYCADGDECRKKH-SYVCPTFKATGSCALGAKCRLHHPKSR 2021
+ +G+C G C +KH V TG C G +C HPK +
Sbjct: 151 DYNRGFCKLGPTCPRKHVRKVACQLYLTGFCPAGPECPKGHPKPQ 195
>gi|190899718|gb|ACE98372.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
Length = 118
Score = 55.1 bits (131), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYF-LQGLCTNKNCPYRHVHVNPNASTCEG 1978
VC L+ LC D C H+ RMP C +F L G C ++C Y+H N + C
Sbjct: 44 VCRHRLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHT--NEDIKECNM 101
Query: 1979 FLKGYCADGDECRKKHS 1995
+ G+C +G +CR +H+
Sbjct: 102 YKLGFCPNGPDCRYRHA 118
>gi|428185523|gb|EKX54375.1| hypothetical protein GUITHDRAFT_99857 [Guillardia theta CCMP2712]
Length = 934
Score = 55.1 bits (131), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 1948 DCSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYV---CPTFKA 2003
DC+++L+G C + CP+ H P C+ L+G C+ GD C H C F
Sbjct: 778 DCTFWLKGCCNKGDACPFSH-QAEPPMIVCKFLLRGDCSRGDACSFSHDLSRIPCKFFHV 836
Query: 2004 TGSCALGAKCRLHH 2017
G+C+ GA C H
Sbjct: 837 GGNCSKGAACPFGH 850
>gi|296811066|ref|XP_002845871.1| mRNA 3'-end-processing protein yth1 [Arthroderma otae CBS 113480]
gi|238843259|gb|EEQ32921.1| mRNA 3'-end-processing protein yth1 [Arthroderma otae CBS 113480]
Length = 251
Score = 55.1 bits (131), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 1921 VCTKFLKGLCSNS-DCKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCE 1977
VC +LKGLC C+ H+ RMP+C F + G C N +C Y+H+ + CE
Sbjct: 88 VCKHYLKGLCKKGLKCEYLHEYNLRRMPECQSFSRNGFCPNGDDCLYQHLSGDAKLPQCE 147
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKC 2013
+ KG+C G C K+H +C F G C G C
Sbjct: 148 HYDKGFCPLGPICAKRHVRRKMC-RFYLAGFCPAGKSC 184
>gi|156095388|ref|XP_001613729.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148802603|gb|EDL44002.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 1935
Score = 55.1 bits (131), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 21/132 (15%)
Query: 1858 NQL-IRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTRFGKCNKD-NGKCPYIHD 1915
N+L ++ K+ S +V + +A K K C + KC + + CPY HD
Sbjct: 354 NELKFKEKKKDEANCTSREVNYDFKSALNIQFSKTKMCPYMNTKEKCKRFLSNMCPYAHD 413
Query: 1916 PS---------KIAVCTKFLKGLCSNS--DCKLTHKVIPERMPD-------CSYFLQGLC 1957
S K A+C F+K LCS S +C H V R D C +FL G C
Sbjct: 414 QSELKPFPDLYKTAMCRNFMKNLCSKSKIECNFAHNVQELRSTDEFYKTTLCKFFLNGYC 473
Query: 1958 -TNKNCPYRHVH 1968
+ NC + H H
Sbjct: 474 KADTNCRHAHGH 485
>gi|331226571|ref|XP_003325955.1| hypothetical protein PGTG_07785 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309304945|gb|EFP81536.1| hypothetical protein PGTG_07785 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 425
Score = 54.7 bits (130), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 7/105 (6%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKN-CPYRHVHVNPNASTCE 1977
VC +L+GLC + C+ H+ MP+C +F + G C+N + C Y HV C
Sbjct: 126 VCKHWLRGLCKKGNSCEFLHEYNLRTMPECWFFGKYGFCSNGDECMYLHVDERMRVLECM 185
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRL-HHPK 2019
F +G+C G +C +KH +C + A G C C + HPK
Sbjct: 186 DFRRGFCPKGPDCPQKHIRRPICRLYMA-GFCPYEKTCHIGGHPK 229
>gi|58263406|ref|XP_569113.1| no arches protein [Cryptococcus neoformans var. neoformans JEC21]
gi|134108566|ref|XP_777234.1| hypothetical protein CNBB4640 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819807|sp|P0CS65.1|YTH1_CRYNB RecName: Full=mRNA 3'-end-processing protein YTH1
gi|338819808|sp|P0CS64.1|YTH1_CRYNJ RecName: Full=mRNA 3'-end-processing protein YTH1
gi|50259919|gb|EAL22587.1| hypothetical protein CNBB4640 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223763|gb|AAW41806.1| no arches protein, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 332
Score = 54.7 bits (130), Expect = 6e-04, Method: Composition-based stats.
Identities = 36/106 (33%), Positives = 49/106 (46%), Gaps = 8/106 (7%)
Query: 1918 KIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFL-QGLCT-NKNCPYRHVHVNPNAS 1974
K+ VC +L+ LC D C+ TH MP C +F+ QG C C Y H
Sbjct: 95 KLTVCKHYLRNLCKMGDNCEYTHDFNLRTMPVCIWFVKQGKCELGGECLY--FHPRDRRV 152
Query: 1975 TCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHP 2018
C + +G+C G C +KH +C + A G C G C+L HP
Sbjct: 153 ECPDYNRGFCVLGPNCPRKHIRRRLCDAY-AAGFCPDGKDCKLAHP 197
Score = 41.2 bits (95), Expect = 6.7, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 30/84 (35%), Gaps = 24/84 (28%)
Query: 1962 CPYRHV------------------HVNPNASTCEGFLKGYCADGDECRKKHSY------V 1997
CPYRH + C+ +L+ C GD C H + V
Sbjct: 67 CPYRHTTPSQLNFKPPPPLPAHPREREKKLTVCKHYLRNLCKMGDNCEYTHDFNLRTMPV 126
Query: 1998 CPTFKATGSCALGAKCRLHHPKSR 2021
C F G C LG +C HP+ R
Sbjct: 127 CIWFVKQGKCELGGECLYFHPRDR 150
>gi|15241989|ref|NP_200503.1| zinc finger CCCH domain-containing protein 65 [Arabidopsis thaliana]
gi|75264233|sp|Q9LTS7.1|C3H65_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 65;
Short=AtC3H65; AltName: Full=Protein EMBRYO DEFECTIVE
1789
gi|8777433|dbj|BAA97023.1| unnamed protein product [Arabidopsis thaliana]
gi|332009441|gb|AED96824.1| zinc finger CCCH domain-containing protein 65 [Arabidopsis thaliana]
Length = 675
Score = 54.7 bits (130), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Query: 1911 PYIHDPSKIAVCTKFLKGLCSNSD-CKLTHKVIPE-RMPDCSYFLQGLCTN-KNCPYRHV 1967
P P I C +LKG C D CK +H IPE + C YF C +CP+ H
Sbjct: 345 PVAPKPKPIKYCRHYLKGRCHEGDKCKFSHDTIPETKCSPCCYFATQSCMKGDDCPFDH- 403
Query: 1968 HVNPNASTCEGFL-KGYCADGDECRKKH 1994
+ + C F+ KG+C GD C H
Sbjct: 404 --DLSKYPCNNFITKGFCYRGDSCLFSH 429
>gi|295913522|gb|ADG58009.1| transcription factor [Lycoris longituba]
Length = 153
Score = 54.7 bits (130), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYF-LQGLCTNKNCPYRHVHVNPNASTCEG 1978
VC +L+ LC D C H+ RMP C +F L G C ++C Y+H N + C
Sbjct: 22 VCRHWLRSLCMKGDSCGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHT--NDDIKECNM 79
Query: 1979 FLKGYCADGDECRKKH 1994
+ G+C +G +CR +H
Sbjct: 80 YKLGFCPNGPDCRYRH 95
>gi|331229246|ref|XP_003327289.1| ZC3H3 protein [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
Length = 498
Score = 54.3 bits (129), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 1946 MPDCSYFLQGLCTNKNCPYRHVHVNPNAS-TCEGFLK-GYCADGDECRKKHSYVCPTFKA 2003
M CS+F + C +CPY HV P +S C F G+C+ G +C ++H CP F
Sbjct: 1 MEHCSHFPR--CNKADCPY--PHVKPTSSQICPEFADLGWCSKGAQCTERHVRECPEFST 56
Query: 2004 TGSCALGAKCRLHHPKSRSNGKKSRRSRKPKNTHGRYFGSMLVEDSESQTAMSERPTVQN 2063
G+C+ CRL H +R++ + +H + D E+ ++ E P
Sbjct: 57 KGTCS-NPGCRLRHMINRNHHQNENLEE--STSHQEDEDHRMTADDEAGSSDEEAPDTAG 113
Query: 2064 NGNLFV 2069
+ LF
Sbjct: 114 SAGLFF 119
>gi|301106366|ref|XP_002902266.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098886|gb|EEY56938.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 602
Score = 54.3 bits (129), Expect = 8e-04, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 61/169 (36%), Gaps = 52/169 (30%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGF 1979
VC +L+ LC D C+ H+ +MP+C + ++ C CP+RHV + C +
Sbjct: 64 VCRHWLRALCMKGDNCEFLHQYDMSKMPECRWGME--CQVPECPFRHVP-DEERVECAFY 120
Query: 1980 LKGYCADGDECRKKH---------------------------------------SYVCPT 2000
+G+C+ G CR +H +C
Sbjct: 121 KQGFCSHGSSCRYRHIKLAREECPETADFALQAKVADEENVKRRKAQPVNEFFKIAICKH 180
Query: 2001 FKATGSCALGAKCRLHH--------PKSRSNGKKSRRSRKPKNTHGRYF 2041
++ GSC G +C H PK K++R R P G F
Sbjct: 181 WEKMGSCPFGDECHFAHGETELRPFPKGEKEEKEARAGR-PGGHQGPAF 228
>gi|302774735|ref|XP_002970784.1| hypothetical protein SELMODRAFT_441325 [Selaginella moellendorffii]
gi|300161495|gb|EFJ28110.1| hypothetical protein SELMODRAFT_441325 [Selaginella moellendorffii]
Length = 715
Score = 53.9 bits (128), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 42/100 (42%), Gaps = 18/100 (18%)
Query: 1922 CTKFLKGLCS---NSDCKLTHKVIPERMP-DCSYFLQGLCTNKNCPYRHVHV-------- 1969
C FL + +C+ H P DC Y++ G C N++CP+RH +
Sbjct: 38 CVYFLASPLTCKKGEECEFRHSEAARINPRDCWYWVSGSCLNRDCPFRHPPLEAGNPTPG 97
Query: 1970 ------NPNASTCEGFLKGYCADGDECRKKHSYVCPTFKA 2003
N + C F++GYCA GD C H PT A
Sbjct: 98 QQQPASNKGRTPCYFFIQGYCAKGDRCPFLHGVPKPTTTA 137
>gi|294866516|ref|XP_002764755.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239864445|gb|EEQ97472.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 151
Score = 53.9 bits (128), Expect = 0.001, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 1920 AVCTKFLKGLCSNSD-CKLTHKVIPERMPDC-SYFLQGLCTNKNCPYRHVHVNPNASTCE 1977
+VC +LK LC D C H+ RMP+C ++ G CT K+C RH + + C+
Sbjct: 76 SVCKHWLKTLCMKGDKCDFLHQYDVNRMPECVAWVKHGRCTEKDCELRH---DIDTVECQ 132
Query: 1978 GFLKGYCADGDECRKKH 1994
+ G+C G+ CR +H
Sbjct: 133 KYKYGFCRLGNMCRLRH 149
>gi|255071081|ref|XP_002507622.1| predicted protein [Micromonas sp. RCC299]
gi|226522897|gb|ACO68880.1| predicted protein [Micromonas sp. RCC299]
Length = 210
Score = 53.9 bits (128), Expect = 0.001, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Query: 1913 IHDPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRHVHVN 1970
+H P VC +L+GLC + C H+ RMP C +F + C +CP++H
Sbjct: 45 LHQPQ--TVCRHWLRGLCMKGNGCGFLHQFDKRRMPTCRFFAKYNECREPDCPFKHSL-- 100
Query: 1971 PNASTCEGFLKGYCADGDECRKKHSYV----CPTFKA 2003
+ C F G+C G CR +H+ + PTF+A
Sbjct: 101 EDVKDCNMFKLGFCIHGKLCRYRHASLKAPPMPTFEA 137
>gi|45198597|ref|NP_985626.1| AFR079Cp [Ashbya gossypii ATCC 10895]
gi|44984548|gb|AAS53450.1| AFR079Cp [Ashbya gossypii ATCC 10895]
Length = 449
Score = 53.9 bits (128), Expect = 0.001, Method: Composition-based stats.
Identities = 41/154 (26%), Positives = 62/154 (40%), Gaps = 36/154 (23%)
Query: 1892 KYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKG--LCSNSDCKLTHKVIPERMPDC 1949
+YC++++R G C+ N C Y+HD +C G + C L H+ DC
Sbjct: 198 QYCKYYSRLGYCS--NKPCRYVHDRRNRGLCRSVAAGHTCATGRQCPLLHEPNEYIAEDC 255
Query: 1950 SYFLQGLCTNKNCPYRH----------------------VHVNPNAST---CEGF-LKGY 1983
F G +CP+ H VH P A+ C F +
Sbjct: 256 PAFHAG-----SCPHTHGAVDTFDRQRANPLLRAGLCHRVHRAPPAAADHLCRPFAYTSF 310
Query: 1984 CADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
C G +C H +CP F +TG+C + C+L+H
Sbjct: 311 CFRGLQCPFLHLKLCPDFYSTGTCFI-LGCQLYH 343
>gi|374108856|gb|AEY97762.1| FAFR079Cp [Ashbya gossypii FDAG1]
Length = 449
Score = 53.9 bits (128), Expect = 0.001, Method: Composition-based stats.
Identities = 41/154 (26%), Positives = 62/154 (40%), Gaps = 36/154 (23%)
Query: 1892 KYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKG--LCSNSDCKLTHKVIPERMPDC 1949
+YC++++R G C+ N C Y+HD +C G + C L H+ DC
Sbjct: 198 QYCKYYSRLGYCS--NKPCRYVHDRRNRGLCRSVAAGHTCATGRQCPLLHEPNEYIAEDC 255
Query: 1950 SYFLQGLCTNKNCPYRH----------------------VHVNPNAST---CEGF-LKGY 1983
F G +CP+ H VH P A+ C F +
Sbjct: 256 PAFHAG-----SCPHTHGAVDTFDRQRANPLLRAGLCHRVHRAPPAAADHLCRPFAYTSF 310
Query: 1984 CADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
C G +C H +CP F +TG+C + C+L+H
Sbjct: 311 CFRGLQCPFLHLKLCPDFYSTGTCFI-LGCQLYH 343
>gi|389584105|dbj|GAB66838.1| hypothetical protein PCYB_101880 [Plasmodium cynomolgi strain B]
Length = 1866
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 55/132 (41%), Gaps = 21/132 (15%)
Query: 1858 NQLIRDPKRRARV-LASEKVRWSLHTARLRLARKRKYCQFFTRFGKCNKD-NGKCPYIHD 1915
N+L K++ V S + + +A K K C + KC + + CPY HD
Sbjct: 322 NELKFKEKKKDEVNCTSREANYDFKSALNVQFSKTKMCPYMNTKEKCKRFLSNMCPYAHD 381
Query: 1916 PS---------KIAVCTKFLKGLCSNS--DCKLTHKVIPERMPD-------CSYFLQGLC 1957
S K A+C F+K LCS S +C H V R D C +FL G C
Sbjct: 382 QSELKPFPDLYKTAMCRNFMKNLCSKSKVECNFAHNVEELRSTDEFYKTTLCKFFLNGYC 441
Query: 1958 -TNKNCPYRHVH 1968
+ NC + H H
Sbjct: 442 KADTNCRHAHGH 453
>gi|315051880|ref|XP_003175314.1| mRNA 3'-end-processing protein yth1 [Arthroderma gypseum CBS 118893]
gi|311340629|gb|EFQ99831.1| mRNA 3'-end-processing protein yth1 [Arthroderma gypseum CBS 118893]
Length = 251
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 1921 VCTKFLKGLCSNS-DCKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCE 1977
VC +LKGLC C+ H+ RMP+C F + G C N +C Y+H+ + CE
Sbjct: 88 VCKHYLKGLCKKGLKCEYLHEYNLRRMPECQSFSRNGFCPNGDDCLYQHLSGDAKLPQCE 147
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKC 2013
+ +G+C G C K+H +C F G C G C
Sbjct: 148 HYDQGFCPLGPICAKRHVRRKLC-RFYLAGFCPAGKTC 184
>gi|327296479|ref|XP_003232934.1| hypothetical protein TERG_06924 [Trichophyton rubrum CBS 118892]
gi|326465245|gb|EGD90698.1| hypothetical protein TERG_06924 [Trichophyton rubrum CBS 118892]
Length = 251
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 1921 VCTKFLKGLCSNS-DCKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCE 1977
VC +LKGLC C+ H+ RMP+C F + G C N +C Y+H+ + CE
Sbjct: 88 VCKHYLKGLCKKGLKCEYLHEYNLRRMPECQSFSRNGFCPNGDDCLYQHLSGDAKLPQCE 147
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKC 2013
+ +G+C G C K+H +C F G C G C
Sbjct: 148 HYDQGFCPLGPICAKRHVRRKLC-RFYLAGFCPAGKTC 184
>gi|326477709|gb|EGE01719.1| mRNA 3'-end-processing protein yth1 [Trichophyton equinum CBS 127.97]
Length = 251
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 1921 VCTKFLKGLCSNS-DCKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCE 1977
VC +LKGLC C+ H+ RMP+C F + G C N +C Y+H+ + CE
Sbjct: 88 VCKHYLKGLCKKGLKCEYLHEYNLRRMPECQSFSRNGFCPNGDDCLYQHLSGDAKLPQCE 147
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKC 2013
+ +G+C G C K+H +C F G C G C
Sbjct: 148 HYDQGFCPLGPICAKRHVRRKLC-RFYLAGFCPAGKTC 184
>gi|407929377|gb|EKG22207.1| SNARE associated Golgi protein [Macrophomina phaseolina MS6]
Length = 289
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 8/113 (7%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQGL-CTN-KNCPYRHVHVNPNASTCE 1977
VC +L+GLC + C+ H+ RMP+C+++ + L C+N +C Y H+ C
Sbjct: 99 VCKHWLRGLCKKGEACEFLHEYNLRRMPECNHYSRHLTCSNGDDCLYLHIDPESKRPPCP 158
Query: 1978 GFLKGYCADGDECRKKH---SYVCPTFKATGSCALGAKC-RLHHPKSRSNGKK 2026
+ +G+C G C KKH +C F G C G C HP+ + + KK
Sbjct: 159 HYDRGFCPLGPRCAKKHVRKDRIC-RFYLAGFCPNGKACTEGAHPRWQDDLKK 210
>gi|302502863|ref|XP_003013392.1| hypothetical protein ARB_00210 [Arthroderma benhamiae CBS 112371]
gi|302657933|ref|XP_003020677.1| hypothetical protein TRV_05203 [Trichophyton verrucosum HKI 0517]
gi|291176956|gb|EFE32752.1| hypothetical protein ARB_00210 [Arthroderma benhamiae CBS 112371]
gi|291184534|gb|EFE40059.1| hypothetical protein TRV_05203 [Trichophyton verrucosum HKI 0517]
Length = 251
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 1921 VCTKFLKGLCSNS-DCKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCE 1977
VC +LKGLC C+ H+ RMP+C F + G C N +C Y+H+ + CE
Sbjct: 88 VCKHYLKGLCKKGLKCEYLHEYNLRRMPECQSFSRNGFCPNGDDCLYQHLSGDAKLPQCE 147
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKC 2013
+ +G+C G C K+H +C F G C G C
Sbjct: 148 HYDQGFCPLGPICAKRHVRRKLC-RFYLAGFCPAGKTC 184
>gi|294933061|ref|XP_002780578.1| mRNA 3'-end-processing protein ytH1, putative [Perkinsus marinus ATCC
50983]
gi|239890512|gb|EER12373.1| mRNA 3'-end-processing protein ytH1, putative [Perkinsus marinus ATCC
50983]
Length = 253
Score = 53.5 bits (127), Expect = 0.001, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 1920 AVCTKFLKGLCSNSD-CKLTHKVIPERMPDC-SYFLQGLCTNKNCPYRHVHVNPNASTCE 1977
+VC +LK LC D C H+ RMP+C ++ G CT K+C RH + C+
Sbjct: 115 SVCKHWLKTLCMKGDKCDFLHQYDVNRMPECVAWVKHGRCTEKDCELRH---DIETVECQ 171
Query: 1978 GFLKGYCADGDECRKKH 1994
+ G+C G+ CR +H
Sbjct: 172 KYKYGFCRLGNMCRLRH 188
>gi|297738650|emb|CBI27895.3| unnamed protein product [Vitis vinifera]
Length = 675
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 1913 IHDPSKIAVCTKFLKGLCSNSD-CKLTHKVIP-ERMPDCSYFLQGLCT-NKNCPYRHVHV 1969
+ P + C +LKG C D C+ +H IP + C +F +G C +CP+ H
Sbjct: 225 VSKPKTVTYCRHYLKGRCHEGDHCRFSHDTIPLTKSSPCCHFARGTCMKGDDCPFDHQLS 284
Query: 1970 NPNASTCEGFL-KGYCADGDECRKKH 1994
N C ++ KG+C+ GD+C H
Sbjct: 285 N---YPCNNYVSKGFCSRGDDCLFSH 307
>gi|67624361|ref|XP_668463.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54659656|gb|EAL38223.1| hypothetical protein Chro.50279 [Cryptosporidium hominis]
Length = 253
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 1914 HDPSKIAVCTKFLKGLCSN-SDCKLTHKVIP-ERMPDCSYFLQGLCTNKNCPYRHVHVNP 1971
H P+++ +CT F+KG C N S C+ H IP + C YF+ G C+ +C Y H
Sbjct: 33 HKPNRLQLCTYFIKGRCKNGSSCQFKHSTIPITKKKLCWYFISGKCSKSDCQYSH---EI 89
Query: 1972 NASTCEGF-LKGYCADGDECRKKHSYV 1997
+ C G+C + +CR H +
Sbjct: 90 SKFPCRYLNTVGFCRNLKDCRFSHELI 116
>gi|413943365|gb|AFW76014.1| hypothetical protein ZEAMMB73_244879 [Zea mays]
Length = 251
Score = 53.5 bits (127), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRHVHVNPNASTCEG 1978
VC +L+GLC + C H+ RMP C +F G C +C Y+H + + C
Sbjct: 61 VCRHWLRGLCMKGEACGFLHQFDKARMPVCRFFRDFGECREPDCAYKHSYDD--VKECNM 118
Query: 1979 FLKGYCADGDECRKKH 1994
+ G+C +G CR KH
Sbjct: 119 YKMGFCPNGPNCRYKH 134
>gi|82753524|ref|XP_727712.1| erythrocyte membrane protein [Plasmodium yoelii yoelii 17XNL]
gi|23483690|gb|EAA19277.1| ERYTHROCYTE MEMBRANE PROTEIN PFEMP3 [Plasmodium yoelii yoelii]
Length = 1133
Score = 53.1 bits (126), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 44/99 (44%), Gaps = 22/99 (22%)
Query: 1890 KRKYCQFFTRFGKCNK-DNGKCPYIHDPS---------KIAVCTKFLKGLC--SNSDCKL 1937
K K C + KC + N CPY HD + K A+C F+K +C S +CK
Sbjct: 381 KTKMCPYMNTKEKCKRFSNNMCPYAHDQNELKPIPNLYKTAMCRNFMKNMCFKSKKECKF 440
Query: 1938 THKVIPERMPD-------CSYFLQGLC-TNKNCPYRHVH 1968
H V R D C +FL G C +KNC RH H
Sbjct: 441 AHHVEELRSTDEFYKTTLCKFFLNGYCKADKNC--RHAH 477
>gi|169766720|ref|XP_001817831.1| mRNA 3'-end-processing protein yth1 [Aspergillus oryzae RIB40]
gi|238483485|ref|XP_002372981.1| mRNA cleavage and polyadenylation specificity factor complex subunit
[Aspergillus flavus NRRL3357]
gi|110283026|sp|Q2URI6.1|YTH1_ASPOR RecName: Full=mRNA 3'-end-processing protein yth1
gi|83765686|dbj|BAE55829.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220701031|gb|EED57369.1| mRNA cleavage and polyadenylation specificity factor complex subunit
[Aspergillus flavus NRRL3357]
Length = 255
Score = 53.1 bits (126), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 1921 VCTKFLKGLCSNS-DCKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCE 1977
VC FLKGLC C+ H+ RMP+C F + G C N +C Y+HV CE
Sbjct: 91 VCKHFLKGLCKKGLKCEYLHEYNLRRMPECQSFSRSGYCPNGDDCLYQHVREQARLPPCE 150
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKC 2013
+ +G+C G C K+H +C + A G C G C
Sbjct: 151 HYDRGFCPLGPLCAKRHVRRRLCQYYLA-GFCPEGKGC 187
>gi|391870897|gb|EIT80066.1| polyadenylation factor I complex, subunit, Yth1 [Aspergillus oryzae
3.042]
Length = 255
Score = 53.1 bits (126), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Query: 1921 VCTKFLKGLCSNS-DCKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCE 1977
VC FLKGLC C+ H+ RMP+C F + G C N +C Y+HV CE
Sbjct: 91 VCKHFLKGLCKKGLKCEYLHEYNLRRMPECQSFSRSGYCPNGDDCLYQHVREQARLPPCE 150
Query: 1978 GFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKC 2013
+ +G+C G C K+H +C + A G C G C
Sbjct: 151 HYDRGFCPLGPLCAKRHVRRRLCQYYLA-GFCPEGKGC 187
>gi|328874347|gb|EGG22712.1| small MutS related family protein [Dictyostelium fasciculatum]
Length = 581
Score = 53.1 bits (126), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 1920 AVCTKFLKGLCSNSDCKLTH--KVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCE 1977
C F++G C N +C+ H V P+ C YFL G C K CP++H + C+
Sbjct: 114 VACRFFMEGACVNENCRFIHDDSVKPKVTTVCKYFLNGQCFVKGCPFKH---SRETVLCK 170
Query: 1978 GFLKGYCADGD 1988
+L+G C D
Sbjct: 171 YWLRGTCCKRD 181
Score = 48.5 bits (114), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 10/77 (12%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHD----PSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDC 1949
C+FF G C +N C +IHD P VC FL G C C H C
Sbjct: 116 CRFFME-GACVNEN--CRFIHDDSVKPKVTTVCKYFLNGQCFVKGCPFKH---SRETVLC 169
Query: 1950 SYFLQGLCTNKNCPYRH 1966
Y+L+G C ++C + H
Sbjct: 170 KYWLRGTCCKRDCIFSH 186
>gi|361130336|gb|EHL02149.1| putative mRNA 3'-end-processing protein YTH1 [Glarea lozoyensis
74030]
Length = 157
Score = 53.1 bits (126), Expect = 0.002, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 1946 MPDCSYFLQ-GLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH-SYVCPTFK 2002
MP+C++F++ G C+N + C Y H+ N C + KG+C G C KKH + F
Sbjct: 1 MPECNFFVRNGYCSNGDECLYLHIDPNSKLPPCPHYDKGFCPLGPNCSKKHVRKILCEFY 60
Query: 2003 ATGSCALGAKCRLHHPKSRSNGKKS--RRSRKPK 2034
G C G C+ HP+ ++ K R R P+
Sbjct: 61 LAGFCPDGKTCKKAHPRWPTDLPKPTVRVERDPE 94
>gi|392576362|gb|EIW69493.1| hypothetical protein TREMEDRAFT_68721 [Tremella mesenterica DSM 1558]
Length = 346
Score = 53.1 bits (126), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 8/109 (7%)
Query: 1918 KIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYF-LQGLC-TNKNCPYRHVHVNPNAS 1974
K+ VC +L+ LC D C+ TH MP C +F + G C C Y H
Sbjct: 98 KMTVCKHYLRNLCKMGDNCEYTHDFNLRTMPVCVWFVMAGKCELGGECLY--YHPRDRRV 155
Query: 1975 TCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPKSR 2021
C + +G+C G EC ++H +C + A G C G C+L HP +
Sbjct: 156 ECPDYNRGFCRLGPECPRRHIRRQICGAYMA-GFCPDGPNCKLAHPSPK 203
Score = 44.7 bits (104), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 24/84 (28%)
Query: 1962 CPYRHVHVNPN------------------ASTCEGFLKGYCADGDECRKKHSY------V 1997
CPYRH +P+ + C+ +L+ C GD C H + V
Sbjct: 70 CPYRHTTPSPSNYKPPPPLPTHPREREKKMTVCKHYLRNLCKMGDNCEYTHDFNLRTMPV 129
Query: 1998 CPTFKATGSCALGAKCRLHHPKSR 2021
C F G C LG +C +HP+ R
Sbjct: 130 CVWFVMAGKCELGGECLYYHPRDR 153
>gi|413934440|gb|AFW68991.1| hypothetical protein ZEAMMB73_893936 [Zea mays]
Length = 246
Score = 53.1 bits (126), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRHVHVNPNASTCEG 1978
VC +L+GLC + C H+ RMP C +F G C +C Y+H + + C
Sbjct: 56 VCRHWLRGLCMKGEACGFLHQFDKARMPVCRFFRDFGECREPDCAYKHSYDD--VKECNM 113
Query: 1979 FLKGYCADGDECRKKH 1994
+ G+C +G CR KH
Sbjct: 114 YKMGFCPNGPNCRYKH 129
>gi|219130928|ref|XP_002185604.1| hypothetical protein PHATRDRAFT_50624 [Phaeodactylum tricornutum CCAP
1055/1]
gi|217402944|gb|EEC42902.1| hypothetical protein PHATRDRAFT_50624 [Phaeodactylum tricornutum CCAP
1055/1]
Length = 603
Score = 52.8 bits (125), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 1914 HDPS-KIAVCTKFLKGLC-SNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNP 1971
HDP + VC +L+ LC + C+ H+ +MP C + + C K+CP+RH+
Sbjct: 62 HDPRLRTVVCRHWLRDLCMKGTACEFLHQYDLSKMPLCRHGER--CKIKDCPFRHIS-EA 118
Query: 1972 NASTCEGFLKGYCADGDECRKKH 1994
N C + +G+C G CR KH
Sbjct: 119 NRMECVFYSQGFCIHGPFCRYKH 141
>gi|47117559|sp|Q8BYK8.2|ZC3H6_MOUSE RecName: Full=Zinc finger CCCH domain-containing protein 6
Length = 1177
Score = 52.8 bits (125), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTN-KNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C +C + H + C+ +L+GYC G+ C HS + C + +
Sbjct: 276 CKYFLEGRCIKGDHCKFNHDAELEKKKEVCKYYLQGYCTKGENCIYMHSEFPCKFYHSGA 335
Query: 2006 SCALGAKCRLHH 2017
C G KC+ H
Sbjct: 336 KCYQGDKCKFSH 347
>gi|156717216|ref|NP_848491.2| zinc finger CCCH domain-containing protein 6 [Mus musculus]
gi|148696278|gb|EDL28225.1| zinc finger CCCH type containing 6 [Mus musculus]
Length = 1177
Score = 52.8 bits (125), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTN-KNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C +C + H + C+ +L+GYC G+ C HS + C + +
Sbjct: 276 CKYFLEGRCIKGDHCKFNHDAELEKKKEVCKYYLQGYCTKGENCIYMHSEFPCKFYHSGA 335
Query: 2006 SCALGAKCRLHH 2017
C G KC+ H
Sbjct: 336 KCYQGDKCKFSH 347
>gi|157821021|ref|NP_001101242.1| zinc finger CCCH domain-containing protein 6 [Rattus norvegicus]
gi|149023250|gb|EDL80144.1| zinc finger CCCH type containing 6 (predicted) [Rattus norvegicus]
Length = 1180
Score = 52.4 bits (124), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C +C + H + C+ +L+GYC G+ C HS + C + +
Sbjct: 275 CKYFLEGRCIKGDHCKFNHDAELEKKKEVCKYYLQGYCTKGENCIYMHSEFPCKFYHSGA 334
Query: 2006 SCALGAKCRLHH 2017
C G KC+ H
Sbjct: 335 KCYQGDKCKFSH 346
>gi|190899690|gb|ACE98358.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
Length = 118
Score = 52.4 bits (124), Expect = 0.003, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYF-LQGLCTNKNCPYRHVHVNPNASTCEG 1978
VC +L+ LC D C H+ RMP C + L G C ++C Y+H N + C
Sbjct: 44 VCRHWLRSLCMKGDACGCLHQYDKSRMPVCRFSRLYGECREQDCVYKHT--NEDIKECNM 101
Query: 1979 FLKGYCADGDECRKKHS 1995
+ G+C +G +CR +H+
Sbjct: 102 YKLGFCPNGPDCRYRHA 118
>gi|296412809|ref|XP_002836112.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629918|emb|CAZ80303.1| unnamed protein product [Tuber melanosporum]
Length = 236
Score = 52.4 bits (124), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 76/161 (47%), Gaps = 17/161 (10%)
Query: 1884 RLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKI---AVCTKFLKGLCSNSD-CKLTH 1939
R L R+ C F + G C N CP H S VC +L+ LC + C+ H
Sbjct: 43 RFGLDPNRRTCPLFVQ-GHCPMGNS-CPDKHAVSSSFNNLVCKHWLRSLCKKGEACEFLH 100
Query: 1940 KVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--S 1995
+ +MP+C++F++ G C+N + C Y HV + C F G+C G C KKH
Sbjct: 101 E---RKMPECNFFVRNGYCSNGEECLYLHVDPDSKIPPCPHFENGFCPLGPTCSKKHVRK 157
Query: 1996 YVCPTFKATGSCALG-AKCRL-HHPKSRSNGKKSRRSRKPK 2034
+C F G C G + C+ HPK ++ G + +KP+
Sbjct: 158 QIC-KFYLAGFCPDGRSNCKEGTHPKWKT-GLPAPTVKKPR 196
>gi|145346398|ref|XP_001417675.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577903|gb|ABO95968.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 82
Score = 52.4 bits (124), Expect = 0.003, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRHVHVNPNASTCEG 1978
VC +L+ LC + C H+ RMP C +F + G C +CPY+H + C
Sbjct: 8 VCRHWLRNLCMKGNACGFLHQFDKSRMPTCRFFAKYGECKEPDCPYKHSL--EDMKDCNM 65
Query: 1979 FLKGYCADGDECRKKH 1994
+ G+C G CR +H
Sbjct: 66 YKLGFCIHGSLCRFRH 81
>gi|27696591|gb|AAH43311.1| Zinc finger CCCH type containing 6 [Mus musculus]
Length = 936
Score = 52.4 bits (124), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C +C + H + C+ +L+GYC G+ C HS + C + +
Sbjct: 35 CKYFLEGRCIKGDHCKFNHDAELEKKKEVCKYYLQGYCTKGENCIYMHSEFPCKFYHSGA 94
Query: 2006 SCALGAKCRLHH 2017
C G KC+ H
Sbjct: 95 KCYQGDKCKFSH 106
>gi|334312710|ref|XP_001382082.2| PREDICTED: zinc finger CCCH domain-containing protein 6 [Monodelphis
domestica]
Length = 1201
Score = 52.4 bits (124), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C + C + H + C+ +++GYC G+ C H+ + C +
Sbjct: 283 CKYFLEGRCIKGDQCKFDHDAELEKKKEICKFYIQGYCTKGENCIYMHNEFPCKFYHTGA 342
Query: 2006 SCALGAKCRLHH 2017
C LG KC+ H
Sbjct: 343 KCYLGDKCKFSH 354
>gi|124506377|ref|XP_001351786.1| conserved Plasmodium protein, unknown function [Plasmodium falciparum
3D7]
gi|23504715|emb|CAD51593.1| conserved Plasmodium protein, unknown function [Plasmodium falciparum
3D7]
Length = 1552
Score = 52.0 bits (123), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 43/99 (43%), Gaps = 22/99 (22%)
Query: 1890 KRKYCQFFTRFGKCNK-DNGKCPYIHDPS---------KIAVCTKFLKGLC--SNSDCKL 1937
K K C + KC + N CPY HD S K A+C F+K +C S +C
Sbjct: 320 KTKMCPYMNTKEKCKRFSNNMCPYAHDKSELKPIPNLYKTAMCRNFIKNMCFKSKKECNF 379
Query: 1938 THKVIPERMPD-------CSYFLQGLC-TNKNCPYRHVH 1968
H V R D C +FL G C +KNC RH H
Sbjct: 380 AHHVEELRSTDEFYKTTLCKFFLNGYCKADKNC--RHAH 416
>gi|26333093|dbj|BAC30264.1| unnamed protein product [Mus musculus]
Length = 810
Score = 52.0 bits (123), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C +C + H + C+ +L+GYC G+ C HS + C + +
Sbjct: 276 CKYFLEGRCIKGDHCKFNHDAELEKKKEVCKYYLQGYCTKGENCIYMHSEFPCKFYHSGA 335
Query: 2006 SCALGAKCRLHH 2017
C G KC+ H
Sbjct: 336 KCYQGDKCKFSH 347
>gi|70939116|ref|XP_740143.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56517652|emb|CAH81845.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 541
Score = 52.0 bits (123), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 44/99 (44%), Gaps = 22/99 (22%)
Query: 1890 KRKYCQFFTRFGKCNK-DNGKCPYIHDPS---------KIAVCTKFLKGLC--SNSDCKL 1937
K K C + KC + N CPY HD + K A+C F+K +C S +CK
Sbjct: 69 KTKMCPYMNTKEKCKRFSNNMCPYAHDQNELKPIPNLYKTAMCRNFMKNMCFKSKKECKF 128
Query: 1938 THKVIPERMPD-------CSYFLQGLC-TNKNCPYRHVH 1968
H V R D C +FL G C +KNC RH H
Sbjct: 129 AHHVEELRSTDEFYKTTLCKFFLNGYCKADKNC--RHAH 165
>gi|348537930|ref|XP_003456445.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like
[Oreochromis niloticus]
Length = 1289
Score = 52.0 bits (123), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C Y+++G CT +C + H + + C+ ++ G+CA D C H + C F TG
Sbjct: 360 CKYYIEGRCTWGDHCNFSHDIELPKKKELCKFYITGFCARADHCPYMHGEFPCKLFHTTG 419
Query: 2006 SCALGAKCRLHH 2017
C G +C H
Sbjct: 420 KCVNGDECMFSH 431
>gi|302818936|ref|XP_002991140.1| hypothetical protein SELMODRAFT_448311 [Selaginella moellendorffii]
gi|300141071|gb|EFJ07786.1| hypothetical protein SELMODRAFT_448311 [Selaginella moellendorffii]
Length = 716
Score = 52.0 bits (123), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 18/87 (20%)
Query: 1922 CTKFLKGLCS---NSDCKLTHKVIPERMP-DCSYFLQGLCTNKNCPYRHVHV-------- 1969
C FL + +C+ H P DC Y++ G C N++CP+RH +
Sbjct: 39 CVYFLASPLTCKKGEECEFRHSETARINPRDCWYWVSGSCLNRDCPFRHPPLEAGNPTPG 98
Query: 1970 ------NPNASTCEGFLKGYCADGDEC 1990
N + C F++GYCA GD C
Sbjct: 99 QQQPASNKGRTPCYFFIQGYCAKGDRC 125
>gi|297826741|ref|XP_002881253.1| hypothetical protein ARALYDRAFT_345050 [Arabidopsis lyrata subsp.
lyrata]
gi|297327092|gb|EFH57512.1| hypothetical protein ARALYDRAFT_345050 [Arabidopsis lyrata subsp.
lyrata]
Length = 460
Score = 52.0 bits (123), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 56/136 (41%), Gaps = 24/136 (17%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERM--PDCSY 1951
CQFF R G+C N C Y H T +G+ D +PER+ PDC Y
Sbjct: 50 CQFFLRTGQCGYGN-TCRYNHP------LTHLPQGVIYYKD------QLPERIGQPDCEY 96
Query: 1952 FLQ-GLC-TNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCAL 2009
FL+ G C C Y H A + G+ ++ CP + TG C
Sbjct: 97 FLKTGACKYGPTCKYHHPKDRNGAGPVLFNVLGFPM------RQGEKSCPYYMQTGLCRF 150
Query: 2010 GAKCRLHHPKSR-SNG 2024
G C+ HHP + SNG
Sbjct: 151 GVACKFHHPHPQPSNG 166
>gi|294948266|ref|XP_002785677.1| hypothetical protein Pmar_PMAR025425 [Perkinsus marinus ATCC 50983]
gi|239899700|gb|EER17473.1| hypothetical protein Pmar_PMAR025425 [Perkinsus marinus ATCC 50983]
Length = 228
Score = 52.0 bits (123), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 44/102 (43%), Gaps = 19/102 (18%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNS-DCKLTHKVIPERMPDCSYF 1952
C FF R G C ++ CP+ HDP I +CT +L G C N C+ +H++ + P
Sbjct: 84 CHFFAR-GMC-RNGTSCPFRHDPKSI-ICTYYLHGNCRNGISCRFSHELPDTQQPAVEEG 140
Query: 1953 LQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
+ G P C+ F G C G CR +H
Sbjct: 141 VDG---------------PPPDVCKFFWHGSCRAGSSCRWRH 167
Score = 49.3 bits (116), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 23/98 (23%)
Query: 1944 ERMPDCSYFLQGLCTN-KNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSY------ 1996
E + C +F +G+C N +CP+RH +P + C +L G C +G CR H
Sbjct: 79 EEISACHFFARGMCRNGTSCPFRH---DPKSIICTYYLHGNCRNGISCRFSHELPDTQQP 135
Query: 1997 ------------VCPTFKATGSCALGAKCRLHHPKSRS 2022
VC F GSC G+ CR H K+ S
Sbjct: 136 AVEEGVDGPPPDVC-KFFWHGSCRAGSSCRWRHVKAPS 172
>gi|224004300|ref|XP_002295801.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209585833|gb|ACI64518.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 479
Score = 52.0 bits (123), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 1917 SKIAVCTKFLKGL-CSNSDCKLTHKVIPE-RMPDCSYFLQ-GLCT-NKNCPYRHVHVNPN 1972
S +C F G+ C+N C L H V E P C +F + G+C+ ++CP+RHV V +
Sbjct: 377 SDTPICRTFRLGMPCNNPKCTLRHDVSAEASRPICVFFQRNGMCSKGESCPFRHVKVRHD 436
Query: 1973 ASTCEGFLK-GYCADGDECRKKH 1994
A C F GYC + D C KH
Sbjct: 437 AEICPVFNSVGYCENPD-CAMKH 458
>gi|297796577|ref|XP_002866173.1| EMB1789 [Arabidopsis lyrata subsp. lyrata]
gi|297312008|gb|EFH42432.1| EMB1789 [Arabidopsis lyrata subsp. lyrata]
Length = 666
Score = 51.6 bits (122), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 39/88 (44%), Gaps = 7/88 (7%)
Query: 1911 PYIHDPSKIAVCTKFLKGLCSNSD-CKLTHKVIPE-RMPDCSYFLQGLCTN-KNCPYRHV 1967
P P I C +LKG C D CK +H PE + C YF C +CP+ H
Sbjct: 335 PVAPKPKPIKYCRHYLKGRCHEGDKCKFSHDTTPETKSSACCYFATQSCMKGDDCPFDH- 393
Query: 1968 HVNPNASTCEGF-LKGYCADGDECRKKH 1994
+ + C F +KG+C GD C H
Sbjct: 394 --DLSKYPCNNFIIKGFCHRGDSCLFSH 419
>gi|303274592|ref|XP_003056614.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462698|gb|EEH59990.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 195
Score = 51.6 bits (122), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRHVHVNPNASTCEG 1978
VC +L+GLC + C H+ +RMP C +F + C +CP++H + C
Sbjct: 40 VCRHWLRGLCMKGNHCGFLHQFDKQRMPTCRFFAKYSECKEPDCPFKHS--LEDVKDCNM 97
Query: 1979 FLKGYCADGDECRKKH 1994
F G+C G CR +H
Sbjct: 98 FKLGFCIHGPNCRYRH 113
>gi|224047526|ref|XP_002197235.1| PREDICTED: zinc finger CCCH domain-containing protein 6 [Taeniopygia
guttata]
Length = 1204
Score = 51.6 bits (122), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C + C + H + C+ +++GYC GD C H+ + C +
Sbjct: 288 CKYFLEGRCIKGEQCKFDHDAEIEKKKEICKFYIQGYCTKGDNCIYLHNEFPCKFYHTGA 347
Query: 2006 SCALGAKCRLHH 2017
C G KC+ H
Sbjct: 348 KCYQGDKCKFSH 359
Score = 46.2 bits (108), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 9/79 (11%)
Query: 1921 VCTKFLKGLC-SNSDCKLTHKV-IPERMPDCSYFLQGLCT-NKNCPYRHVHVNPNASTCE 1977
+C FL+G C CK H I ++ C +++QG CT NC Y H N C+
Sbjct: 287 ICKYFLEGRCIKGEQCKFDHDAEIEKKKEICKFYIQGYCTKGDNCIYLH-----NEFPCK 341
Query: 1978 GFLKGY-CADGDECRKKHS 1995
+ G C GD+C+ H+
Sbjct: 342 FYHTGAKCYQGDKCKFSHA 360
>gi|328718988|ref|XP_003246634.1| PREDICTED: hypothetical protein LOC100163799 isoform 3 [Acyrthosiphon
pisum]
Length = 862
Score = 51.6 bits (122), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 1949 CSYFLQGLCTNK-NCPYRHVHVN-PNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFLQG C + NC Y H N C+ +L C+ D C HS + C +
Sbjct: 249 CQYFLQGKCLKENNCTYSHQQPNGRKMELCKFYLMDCCSKEDRCTFMHSEFPCKYYHTGM 308
Query: 2006 SCALGAKCRLHHPKSRSNGKK 2026
C G CR H K + KK
Sbjct: 309 KCYSGVNCRFSHAKLDEDQKK 329
>gi|221056889|ref|XP_002259582.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193809654|emb|CAQ40355.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 1927
Score = 51.6 bits (122), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 43/99 (43%), Gaps = 22/99 (22%)
Query: 1890 KRKYCQFFTRFGKCNKD-NGKCPYIHDPS---------KIAVCTKFLKGLCSNS--DCKL 1937
K K C + KC + + CPY HD S K A+C F+K LCS S +C
Sbjct: 385 KTKMCPYMNTKEKCKRFLSNMCPYAHDQSELKPFPDLYKTAMCRNFMKNLCSKSKIECNF 444
Query: 1938 THKVIPERMPD-------CSYFLQGLC-TNKNCPYRHVH 1968
H V R D C +FL G C + NC RH H
Sbjct: 445 AHNVEELRSTDEFYKTTLCKFFLNGYCKADTNC--RHAH 481
>gi|328718986|ref|XP_003246633.1| PREDICTED: hypothetical protein LOC100163799 isoform 2 [Acyrthosiphon
pisum]
Length = 868
Score = 51.2 bits (121), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 1949 CSYFLQGLCTNK-NCPYRHVHVN-PNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFLQG C + NC Y H N C+ +L C+ D C HS + C +
Sbjct: 255 CQYFLQGKCLKENNCTYSHQQPNGRKMELCKFYLMDCCSKEDRCTFMHSEFPCKYYHTGM 314
Query: 2006 SCALGAKCRLHHPKSRSNGKK 2026
C G CR H K + KK
Sbjct: 315 KCYSGVNCRFSHAKLDEDQKK 335
>gi|328773575|gb|EGF83612.1| hypothetical protein BATDEDRAFT_22451 [Batrachochytrium dendrobatidis
JAM81]
Length = 787
Score = 51.2 bits (121), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
Query: 1949 CSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCA 2008
C +F+ G C +C Y H +P+A C+ +L+G C G+ C H F A+ S
Sbjct: 357 CRHFMIGQCYRSDCWYSH---DPDALVCKFWLQGRCFKGNNCEFVHGEGLTGFVASSSLG 413
Query: 2009 LGAKCRLHHPKSRSNGKKSRRS-RKPKNTHGRYFGSMLVEDSES 2051
GA+ S+++G + S RK K YFGS + D+ S
Sbjct: 414 SGAESAF--SSSQTSGNVTINSARKTKFGGASYFGSPTLNDTGS 455
>gi|392346719|ref|XP_003749617.1| PREDICTED: zinc finger CCCH domain-containing protein 6 [Rattus
norvegicus]
Length = 1256
Score = 51.2 bits (121), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C +C + H + C+ +L+GYC G+ C H+ + C + +
Sbjct: 351 CKYFLEGRCIKGDHCKFNHDAELEKKKEVCKYYLQGYCTKGENCIYMHNEFPCKFYHSGA 410
Query: 2006 SCALGAKCRLHH 2017
C G KC+ H
Sbjct: 411 KCYQGDKCKFSH 422
>gi|328718990|ref|XP_001945480.2| PREDICTED: hypothetical protein LOC100163799 isoform 1 [Acyrthosiphon
pisum]
Length = 846
Score = 51.2 bits (121), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 1949 CSYFLQGLCTNK-NCPYRHVHVN-PNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFLQG C + NC Y H N C+ +L C+ D C HS + C +
Sbjct: 255 CQYFLQGKCLKENNCTYSHQQPNGRKMELCKFYLMDCCSKEDRCTFMHSEFPCKYYHTGM 314
Query: 2006 SCALGAKCRLHHPKSRSNGKK 2026
C G CR H K + KK
Sbjct: 315 KCYSGVNCRFSHAKLDEDQKK 335
>gi|195540171|gb|AAI68044.1| LOC100145628 protein [Xenopus (Silurana) tropicalis]
Length = 1365
Score = 51.2 bits (121), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YF++G CT ++C + H V V C+ ++ GYCA + C H+ + C + TG
Sbjct: 360 CKYFVEGRCTWGEHCNFSHDVEVPRRRGLCKFYVSGYCARAENCPFMHNDFPCKLYHTTG 419
Query: 2006 SCALGAKCRLHH 2017
+C G C H
Sbjct: 420 NCINGEDCMFSH 431
>gi|187607595|ref|NP_001120502.1| uncharacterized protein LOC100145628 [Xenopus (Silurana) tropicalis]
gi|170284827|gb|AAI61391.1| LOC100145628 protein [Xenopus (Silurana) tropicalis]
Length = 1053
Score = 51.2 bits (121), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YF++G CT ++C + H V V C+ ++ GYCA + C H+ + C + TG
Sbjct: 48 CKYFVEGRCTWGEHCNFSHDVEVPRRRGLCKFYVSGYCARAENCPFMHNDFPCKLYHTTG 107
Query: 2006 SCALGAKCRLHH 2017
+C G C H
Sbjct: 108 NCINGEDCMFSH 119
>gi|357135268|ref|XP_003569232.1| PREDICTED: zinc finger CCCH domain-containing protein 7-like
[Brachypodium distachyon]
Length = 685
Score = 51.2 bits (121), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 71/201 (35%), Gaps = 42/201 (20%)
Query: 1839 YIPRRLVIGNDEYVRIGNG---NQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQ 1895
++PR +G DE V + P +R R+ E+ R++ A +R+
Sbjct: 356 HVPRAQAVGYDEVVEWNETPLHDAEAPRPGKRKRIFTEERKAKKTKNKRVKRALQRE-AD 414
Query: 1896 FFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ 1954
R K I P + C +L G C + CK +H P
Sbjct: 415 GVKRL--------KLAPIIKPKVVRYCHFYLHGKCQQGNVCKFSHDTTP----------- 455
Query: 1955 GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS---YVCPTFKATGSCALGA 2011
L +K C + F +G C GD+C H Y C F G C G
Sbjct: 456 -LTKSKPCTH--------------FARGSCLKGDDCPYDHELSKYPCHNFLGNGMCLRGD 500
Query: 2012 KCRLHHPKSRSNGKKSRRSRK 2032
KC+ H ++ ++ ++K
Sbjct: 501 KCKFSHVAPTADDSSTKDAKK 521
>gi|209878466|ref|XP_002140674.1| zinc finger (CCCH type) domain-containing protein [Cryptosporidium
muris RN66]
gi|209556280|gb|EEA06325.1| zinc finger (CCCH type) domain-containing protein [Cryptosporidium
muris RN66]
Length = 183
Score = 51.2 bits (121), Expect = 0.007, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 11/90 (12%)
Query: 1914 HDPS----KIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDC-SYFLQGLCTNK---NCPY 1964
HDP+ VC +++ +C D C H+ ERMP C +Y G+C ++ NCP+
Sbjct: 32 HDPNVRGRHSVVCRHWIRNMCMKGDFCDFLHQYDYERMPPCFTYQKYGVCVDEALGNCPF 91
Query: 1965 RHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
+H C + G+C G +C+++H
Sbjct: 92 KHK--ADETPLCAQYFLGFCKFGPKCKRRH 119
>gi|356554539|ref|XP_003545603.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like [Glycine
max]
Length = 417
Score = 51.2 bits (121), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 59/147 (40%), Gaps = 25/147 (17%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPER--MPDCSY 1951
C ++ R G C + C Y H P+ I++ T + + L P+R PDC Y
Sbjct: 50 CLYYLRTGACGYGS-NCRY-HHPAHISIGTHYGEEL-------------PQRAGQPDCEY 94
Query: 1952 FLQ-GLC-TNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCAL 2009
FL+ G+C C Y H A+ G+ +E CP + TGSC
Sbjct: 95 FLKTGMCKYGSTCKYHHPKDRRGAAPVSFNTLGFPMRQEE------KSCPYYMRTGSCKF 148
Query: 2010 GAKCRLHHPKSRSNGKKSRRSRKPKNT 2036
G C+ HHP+ S G P T
Sbjct: 149 GVACKFHHPQYASLGAYPLAGGPPTPT 175
>gi|432891076|ref|XP_004075536.1| PREDICTED: uncharacterized protein LOC101162773 [Oryzias latipes]
Length = 879
Score = 50.8 bits (120), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C Y+++G CT +C + H V + C+ ++ G+CA D C H + C F TG
Sbjct: 376 CKYYIEGRCTWGDHCNFSHDVELPKKKELCKFYITGFCARADHCPYMHGEFPCKLFHTTG 435
Query: 2006 SCALGAKCRLHH 2017
+C G +C H
Sbjct: 436 NCVNGDECMFSH 447
>gi|312069238|ref|XP_003137589.1| hypothetical protein LOAG_02003 [Loa loa]
Length = 120
Score = 50.8 bits (120), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 1926 LKGLCSNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCA 1985
+ GLC C TH + +MP C YFL+ C++++CPY HV + CE F +G C
Sbjct: 1 MTGLCRGR-CGQTHCLSSHQMPICDYFLRLTCSDEHCPYLHVKHAAGSKPCEDFNRGICK 59
Query: 1986 DGDECRKKHSY 1996
C H Y
Sbjct: 60 KSSSCSFPHRY 70
>gi|326674230|ref|XP_686060.4| PREDICTED: hypothetical protein LOC557823 [Danio rerio]
Length = 1323
Score = 50.4 bits (119), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C Y+++G CT +C + H + + C+ ++ G+CA + C H + C F TG
Sbjct: 364 CKYYIEGRCTWGDHCNFSHDIELPKKKELCKFYITGFCARAENCPYMHGDFPCKLFHTTG 423
Query: 2006 SCALGAKCRLHH 2017
+C G +C H
Sbjct: 424 NCVNGEECMFSH 435
>gi|291386315|ref|XP_002709610.1| PREDICTED: zinc finger CCCH-type domain containing 6 [Oryctolagus
cuniculus]
Length = 1189
Score = 50.4 bits (119), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C + C + H + C+ +L+GYC G+ C H+ + C +
Sbjct: 278 CKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMHNEFPCKFYHTGA 337
Query: 2006 SCALGAKCRLHH 2017
C G KC+ H
Sbjct: 338 KCYQGDKCKFSH 349
Score = 50.1 bits (118), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 9/78 (11%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKV-IPERMPDCSYFLQGLCT-NKNCPYRHVHVNPNASTCE 1977
+C FL+G C D CK H + +R C ++LQG CT +NC Y H N C+
Sbjct: 277 ICKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMH-----NEFPCK 331
Query: 1978 GFLKGY-CADGDECRKKH 1994
+ G C GD+C+ H
Sbjct: 332 FYHTGAKCYQGDKCKFSH 349
>gi|417413590|gb|JAA53115.1| Putative polyadenylation factor i complex subunit yth1 cpsf subunit,
partial [Desmodus rotundus]
Length = 1169
Score = 50.4 bits (119), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C + C + H + C+ +L+GYC G+ C H+ + C + +
Sbjct: 262 CKYFLEGRCIKGDQCKFDHDAELEKKKEICKFYLQGYCTKGENCIYMHNEFPCKFYHSGA 321
Query: 2006 SCALGAKCRLHH 2017
C G KC+ H
Sbjct: 322 KCYQGDKCKFSH 333
>gi|417413604|gb|JAA53122.1| Putative polyadenylation factor i complex subunit yth1 cpsf subunit,
partial [Desmodus rotundus]
Length = 1177
Score = 50.1 bits (118), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C + C + H + C+ +L+GYC G+ C H+ + C + +
Sbjct: 270 CKYFLEGRCIKGDQCKFDHDAELEKKKEICKFYLQGYCTKGENCIYMHNEFPCKFYHSGA 329
Query: 2006 SCALGAKCRLHH 2017
C G KC+ H
Sbjct: 330 KCYQGDKCKFSH 341
>gi|387201534|gb|AFJ68908.1| cleavage and polyadenylation specificity factor subunit 4, partial
[Nannochloropsis gaditana CCMP526]
Length = 242
Score = 50.1 bits (118), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 1917 SKIAVCTKFLKGLCS-NSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNAST 1975
SK VC +L G+C+ + DC H+ +R+P C F + +CP++HV + +
Sbjct: 55 SKNVVCIHYLVGMCALDKDCPYLHQYDLDRVPICP-FGSKCVRDDDCPFKHV-TEEDKTE 112
Query: 1976 CEGFLKGYCADGDECRKKH 1994
C + +G+C G CR KH
Sbjct: 113 CVFYRQGFCMYGPFCRYKH 131
Score = 44.3 bits (103), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Query: 1901 GKCNKDNGKCPYIH--DPSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLCT 1958
G C D CPY+H D ++ +C F + DC H V E +C ++ QG C
Sbjct: 66 GMCALDK-DCPYLHQYDLDRVPIC-PFGSKCVRDDDCPFKH-VTEEDKTECVFYRQGFCM 122
Query: 1959 -NKNCPYRHVHVNP 1971
C Y+HVH NP
Sbjct: 123 YGPFCRYKHVHRNP 136
>gi|149028482|gb|EDL83867.1| rCG64172 [Rattus norvegicus]
Length = 196
Score = 50.1 bits (118), Expect = 0.013, Method: Composition-based stats.
Identities = 41/145 (28%), Positives = 62/145 (42%), Gaps = 8/145 (5%)
Query: 1915 DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQGLCTNKN-CPYRHVHVNPN 1972
D S AVC F+K C C H + E+ C ++L+GLC + C + H +
Sbjct: 16 DKSGAAVCEFFVKAACGKGGMCPFCH-ISGEKTVVCQHWLRGLCKKGDQCEFLHKYDITK 74
Query: 1973 ASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRS 2030
C F +C G CR +H+ +C + G C GA C+ HP+ S
Sbjct: 75 MLECY-FYSNFCKHGPLCRYQHTRRVLCVNY-LVGFCPGGASCKFIHPRFELPMGTIEPS 132
Query: 2031 RKPKNTHGRYFG-SMLVEDSESQTA 2054
P+ T R G ++E +SQ +
Sbjct: 133 PLPQQTQPRTKGVPQVIEVMQSQNS 157
>gi|326914753|ref|XP_003203687.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like
[Meleagris gallopavo]
Length = 1206
Score = 50.1 bits (118), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C + C + H + C+ +++GYC G+ C H+ + C +
Sbjct: 287 CKYFLEGRCIKGEQCKFDHDAEIEKKKEICKFYIQGYCTKGENCIYLHNEFPCKFYHTGA 346
Query: 2006 SCALGAKCRLHH 2017
C G KC+ H
Sbjct: 347 KCYQGDKCKFSH 358
Score = 47.0 bits (110), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 1921 VCTKFLKGLC-SNSDCKLTHKV-IPERMPDCSYFLQGLCT-NKNCPYRHVHVNPNASTCE 1977
+C FL+G C CK H I ++ C +++QG CT +NC Y H N C+
Sbjct: 286 ICKYFLEGRCIKGEQCKFDHDAEIEKKKEICKFYIQGYCTKGENCIYLH-----NEFPCK 340
Query: 1978 GFLKGY-CADGDECRKKHS 1995
+ G C GD+C+ H+
Sbjct: 341 FYHTGAKCYQGDKCKFSHA 359
>gi|417413486|gb|JAA53067.1| Putative polyadenylation factor i complex subunit yth1 cpsf subunit,
partial [Desmodus rotundus]
Length = 1110
Score = 50.1 bits (118), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C + C + H + C+ +L+GYC G+ C H+ + C + +
Sbjct: 203 CKYFLEGRCIKGDQCKFDHDAELEKKKEICKFYLQGYCTKGENCIYMHNEFPCKFYHSGA 262
Query: 2006 SCALGAKCRLHH 2017
C G KC+ H
Sbjct: 263 KCYQGDKCKFSH 274
>gi|351705068|gb|EHB07987.1| Zinc finger CCCH domain-containing protein 6 [Heterocephalus glaber]
Length = 1143
Score = 50.1 bits (118), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C + C + H + C+ +L+GYC G+ C HS + C + +
Sbjct: 237 CKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMHSEFPCKFYHSGA 296
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 297 KCYQGDNCKFSH 308
Score = 47.8 bits (112), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 9/78 (11%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKV-IPERMPDCSYFLQGLCT-NKNCPYRHVHVNPNASTCE 1977
+C FL+G C D CK H + +R C ++LQG CT +NC Y H C+
Sbjct: 236 ICKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMHSEF-----PCK 290
Query: 1978 GFLKGY-CADGDECRKKH 1994
+ G C GD C+ H
Sbjct: 291 FYHSGAKCYQGDNCKFSH 308
>gi|402891928|ref|XP_003909180.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 6, partial [Papio anubis]
Length = 1177
Score = 50.1 bits (118), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKV-IPERMPDCSYFLQGLCT-NKNCPYRHVHVNPNASTCE 1977
+C FL+G C D CK H + +R C ++LQG CT +NC Y H N C+
Sbjct: 265 ICKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMH-----NEFPCK 319
Query: 1978 GFLKGY-CADGDECRKKH 1994
+ G C GD C+ H
Sbjct: 320 FYHSGAKCYQGDNCKFSH 337
Score = 48.9 bits (115), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C + C + H + C+ +L+GYC G+ C H+ + C + +
Sbjct: 266 CKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMHNEFPCKFYHSGA 325
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 326 KCYQGDNCKFSH 337
>gi|397466171|ref|XP_003804842.1| PREDICTED: zinc finger CCCH domain-containing protein 6 [Pan
paniscus]
Length = 1207
Score = 50.1 bits (118), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKV-IPERMPDCSYFLQGLCT-NKNCPYRHVHVNPNASTCE 1977
+C FL+G C D CK H + +R C ++LQG CT +NC Y H N C+
Sbjct: 295 ICKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMH-----NEFPCK 349
Query: 1978 GFLKGY-CADGDECRKKH 1994
+ G C GD C+ H
Sbjct: 350 FYHSGAKCYQGDNCKFSH 367
Score = 48.9 bits (115), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C + C + H + C+ +L+GYC G+ C H+ + C + +
Sbjct: 296 CKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMHNEFPCKFYHSGA 355
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 356 KCYQGDNCKFSH 367
>gi|395853711|ref|XP_003799347.1| PREDICTED: zinc finger CCCH domain-containing protein 6 [Otolemur
garnettii]
Length = 1260
Score = 50.1 bits (118), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKV-IPERMPDCSYFLQGLCT-NKNCPYRHVHVNPNASTCE 1977
+C FL+G C D CK H + +R C ++LQG CT +NC Y H N C+
Sbjct: 349 ICKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMH-----NEFPCK 403
Query: 1978 GFLKGY-CADGDECRKKH 1994
+ G C GD C+ H
Sbjct: 404 FYHSGAKCYQGDNCKFSH 421
Score = 48.9 bits (115), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C + C + H + C+ +L+GYC G+ C H+ + C + +
Sbjct: 350 CKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMHNEFPCKFYHSGA 409
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 410 KCYQGDNCKFSH 421
>gi|311266873|ref|XP_003131299.1| PREDICTED: LOW QUALITY PROTEIN: putative cleavage and polyadenylation
specificity factor subunit 4-like protein-like [Sus
scrofa]
Length = 214
Score = 50.1 bits (118), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 64/146 (43%), Gaps = 30/146 (20%)
Query: 1894 CQFFTRFGKCNKDNGK-CPYIHDPSK-IAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCS 1950
C FF + G C+K GK CP+ D + + VC L+GLC D CK H+ P+C
Sbjct: 41 CSFFAK-GLCHK--GKLCPFXPDRGETLXVCKPRLRGLCKTGDQCKFPHQYDVTTSPEC- 96
Query: 1951 YFLQGLC----TNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSY---------- 1996
YF L NK CP+ HV + C F + +C DG + +H +
Sbjct: 97 YFCSKLGFSVDCNKECPFLHVTPDFKNQDCLWFDQDFCKDGPLYKYRHVHGIMCINYLAG 156
Query: 1997 VCP---------TFKATGSCALGAKC 2013
CP TF A S + GAKC
Sbjct: 157 FCPEGPQSHFAQTFHAFTSPSWGAKC 182
>gi|313661358|ref|NP_001186379.1| zinc finger CCCH domain-containing protein 6 [Gallus gallus]
Length = 1206
Score = 50.1 bits (118), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C + C + H + C+ +++GYC G+ C H+ + C +
Sbjct: 287 CKYFLEGRCIKGEQCKFDHDAEIEKKKEICKFYIQGYCTKGENCIYLHNEFPCKFYHTGA 346
Query: 2006 SCALGAKCRLHH 2017
C G KC+ H
Sbjct: 347 KCYQGDKCKFSH 358
Score = 47.0 bits (110), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 1921 VCTKFLKGLC-SNSDCKLTHKV-IPERMPDCSYFLQGLCT-NKNCPYRHVHVNPNASTCE 1977
+C FL+G C CK H I ++ C +++QG CT +NC Y H N C+
Sbjct: 286 ICKYFLEGRCIKGEQCKFDHDAEIEKKKEICKFYIQGYCTKGENCIYLH-----NEFPCK 340
Query: 1978 GFLKGY-CADGDECRKKHS 1995
+ G C GD+C+ H+
Sbjct: 341 FYHTGAKCYQGDKCKFSHA 359
>gi|355729873|gb|AES10012.1| zinc finger CCCH-type containing 6 [Mustela putorius furo]
Length = 1170
Score = 50.1 bits (118), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKV-IPERMPDCSYFLQGLCT-NKNCPYRHVHVNPNASTCE 1977
+C FL+G C D CK H + +R C ++LQG CT +NC Y H N C+
Sbjct: 269 ICKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMH-----NEFPCK 323
Query: 1978 GFLKGY-CADGDECRKKH 1994
+ G C GD C+ H
Sbjct: 324 FYHSGAKCYQGDNCKFSH 341
Score = 48.9 bits (115), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C + C + H + C+ +L+GYC G+ C H+ + C + +
Sbjct: 270 CKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMHNEFPCKFYHSGA 329
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 330 KCYQGDNCKFSH 341
>gi|410035577|ref|XP_525863.4| PREDICTED: zinc finger CCCH domain-containing protein 6 [Pan
troglodytes]
Length = 1247
Score = 50.1 bits (118), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKV-IPERMPDCSYFLQGLCT-NKNCPYRHVHVNPNASTCE 1977
+C FL+G C D CK H + +R C ++LQG CT +NC Y H N C+
Sbjct: 335 ICKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMH-----NEFPCK 389
Query: 1978 GFLKGY-CADGDECRKKH 1994
+ G C GD C+ H
Sbjct: 390 FYHSGAKCYQGDNCKFSH 407
Score = 48.9 bits (115), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C + C + H + C+ +L+GYC G+ C H+ + C + +
Sbjct: 336 CKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMHNEFPCKFYHSGA 395
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 396 KCYQGDNCKFSH 407
>gi|332257254|ref|XP_003277724.1| PREDICTED: zinc finger CCCH domain-containing protein 6 [Nomascus
leucogenys]
Length = 1188
Score = 50.1 bits (118), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKV-IPERMPDCSYFLQGLCT-NKNCPYRHVHVNPNASTCE 1977
+C FL+G C D CK H + +R C ++LQG CT +NC Y H N C+
Sbjct: 277 ICKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMH-----NEFPCK 331
Query: 1978 GFLKGY-CADGDECRKKH 1994
+ G C GD C+ H
Sbjct: 332 FYHSGAKCYQGDNCKFSH 349
Score = 48.9 bits (115), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C + C + H + C+ +L+GYC G+ C H+ + C + +
Sbjct: 278 CKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMHNEFPCKFYHSGA 337
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 338 KCYQGDNCKFSH 349
>gi|355565992|gb|EHH22421.1| hypothetical protein EGK_05682 [Macaca mulatta]
Length = 1188
Score = 50.1 bits (118), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKV-IPERMPDCSYFLQGLCT-NKNCPYRHVHVNPNASTCE 1977
+C FL+G C D CK H + +R C ++LQG CT +NC Y H N C+
Sbjct: 276 ICKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMH-----NEFPCK 330
Query: 1978 GFLKGY-CADGDECRKKH 1994
+ G C GD C+ H
Sbjct: 331 FYHSGAKCYQGDNCKFSH 348
Score = 48.9 bits (115), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C + C + H + C+ +L+GYC G+ C H+ + C + +
Sbjct: 277 CKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMHNEFPCKFYHSGA 336
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 337 KCYQGDNCKFSH 348
>gi|410334299|gb|JAA36096.1| zinc finger CCCH-type containing 6 [Pan troglodytes]
Length = 1189
Score = 50.1 bits (118), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKV-IPERMPDCSYFLQGLCT-NKNCPYRHVHVNPNASTCE 1977
+C FL+G C D CK H + +R C ++LQG CT +NC Y H N C+
Sbjct: 277 ICKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMH-----NEFPCK 331
Query: 1978 GFLKGY-CADGDECRKKH 1994
+ G C GD C+ H
Sbjct: 332 FYHSGAKCYQGDNCKFSH 349
Score = 48.9 bits (115), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C + C + H + C+ +L+GYC G+ C H+ + C + +
Sbjct: 278 CKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMHNEFPCKFYHSGA 337
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 338 KCYQGDNCKFSH 349
>gi|403303869|ref|XP_003942541.1| PREDICTED: zinc finger CCCH domain-containing protein 6 [Saimiri
boliviensis boliviensis]
Length = 1190
Score = 50.1 bits (118), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKV-IPERMPDCSYFLQGLCT-NKNCPYRHVHVNPNASTCE 1977
+C FL+G C D CK H + +R C ++LQG CT +NC Y H N C+
Sbjct: 278 ICKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMH-----NEFPCK 332
Query: 1978 GFLKGY-CADGDECRKKH 1994
+ G C GD C+ H
Sbjct: 333 FYHSGAKCYQGDNCKFSH 350
Score = 48.9 bits (115), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C + C + H + C+ +L+GYC G+ C H+ + C + +
Sbjct: 279 CKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMHNEFPCKFYHSGA 338
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 339 KCYQGDNCKFSH 350
>gi|354471279|ref|XP_003497870.1| PREDICTED: zinc finger CCCH domain-containing protein 6 [Cricetulus
griseus]
Length = 1168
Score = 50.1 bits (118), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C +C + H + C+ +L+GYC G+ C HS + C + +
Sbjct: 266 CKYFLEGRCIKGDHCKFDHDAELEKKKEICKYYLQGYCTKGENCIYMHSEFPCKFYHSGA 325
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 326 KCYQGDNCKFSH 337
Score = 48.5 bits (114), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 37/78 (47%), Gaps = 9/78 (11%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPD-CSYFLQGLCT-NKNCPYRHVHVNPNASTCE 1977
+C FL+G C D CK H E+ + C Y+LQG CT +NC Y H C+
Sbjct: 265 ICKYFLEGRCIKGDHCKFDHDAELEKKKEICKYYLQGYCTKGENCIYMHSEF-----PCK 319
Query: 1978 GFLKGY-CADGDECRKKH 1994
+ G C GD C+ H
Sbjct: 320 FYHSGAKCYQGDNCKFSH 337
>gi|296223267|ref|XP_002757547.1| PREDICTED: zinc finger CCCH domain-containing protein 6 [Callithrix
jacchus]
Length = 1190
Score = 50.1 bits (118), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKV-IPERMPDCSYFLQGLCT-NKNCPYRHVHVNPNASTCE 1977
+C FL+G C D CK H + +R C ++LQG CT +NC Y H N C+
Sbjct: 278 ICKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMH-----NEFPCK 332
Query: 1978 GFLKGY-CADGDECRKKH 1994
+ G C GD C+ H
Sbjct: 333 FYHSGAKCYQGDNCKFSH 350
Score = 48.9 bits (115), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C + C + H + C+ +L+GYC G+ C H+ + C + +
Sbjct: 279 CKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMHNEFPCKFYHSGA 338
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 339 KCYQGDNCKFSH 350
>gi|410258180|gb|JAA17057.1| zinc finger CCCH-type containing 6 [Pan troglodytes]
gi|410303266|gb|JAA30233.1| zinc finger CCCH-type containing 6 [Pan troglodytes]
Length = 1189
Score = 50.1 bits (118), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKV-IPERMPDCSYFLQGLCT-NKNCPYRHVHVNPNASTCE 1977
+C FL+G C D CK H + +R C ++LQG CT +NC Y H N C+
Sbjct: 277 ICKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMH-----NEFPCK 331
Query: 1978 GFLKGY-CADGDECRKKH 1994
+ G C GD C+ H
Sbjct: 332 FYHSGAKCYQGDNCKFSH 349
Score = 48.9 bits (115), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C + C + H + C+ +L+GYC G+ C H+ + C + +
Sbjct: 278 CKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMHNEFPCKFYHSGA 337
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 338 KCYQGDNCKFSH 349
>gi|426336831|ref|XP_004031658.1| PREDICTED: zinc finger CCCH domain-containing protein 6 [Gorilla
gorilla gorilla]
Length = 1189
Score = 50.1 bits (118), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKV-IPERMPDCSYFLQGLCT-NKNCPYRHVHVNPNASTCE 1977
+C FL+G C D CK H + +R C ++LQG CT +NC Y H N C+
Sbjct: 277 ICKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMH-----NEFPCK 331
Query: 1978 GFLKGY-CADGDECRKKH 1994
+ G C GD C+ H
Sbjct: 332 FYHSGAKCYQGDNCKFSH 349
Score = 48.9 bits (115), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C + C + H + C+ +L+GYC G+ C H+ + C + +
Sbjct: 278 CKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMHNEFPCKFYHSGA 337
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 338 KCYQGDNCKFSH 349
>gi|355751579|gb|EHH55834.1| hypothetical protein EGM_05117 [Macaca fascicularis]
Length = 1188
Score = 50.1 bits (118), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKV-IPERMPDCSYFLQGLCT-NKNCPYRHVHVNPNASTCE 1977
+C FL+G C D CK H + +R C ++LQG CT +NC Y H N C+
Sbjct: 276 ICKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMH-----NEFPCK 330
Query: 1978 GFLKGY-CADGDECRKKH 1994
+ G C GD C+ H
Sbjct: 331 FYHSGAKCYQGDNCKFSH 348
Score = 48.9 bits (115), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C + C + H + C+ +L+GYC G+ C H+ + C + +
Sbjct: 277 CKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMHNEFPCKFYHSGA 336
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 337 KCYQGDNCKFSH 348
>gi|410955328|ref|XP_003984307.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 6 [Felis catus]
Length = 1169
Score = 50.1 bits (118), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKV-IPERMPDCSYFLQGLCT-NKNCPYRHVHVNPNASTCE 1977
+C FL+G C D CK H + +R C ++LQG CT +NC Y H N C+
Sbjct: 267 ICKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMH-----NEFPCK 321
Query: 1978 GFLKGY-CADGDECRKKH 1994
+ G C GD C+ H
Sbjct: 322 FYHSGAKCYQGDNCKFSH 339
Score = 48.9 bits (115), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C + C + H + C+ +L+GYC G+ C H+ + C + +
Sbjct: 268 CKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMHNEFPCKFYHSGA 327
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 328 KCYQGDNCKFSH 339
>gi|359321589|ref|XP_532959.4| PREDICTED: zinc finger CCCH domain-containing protein 6 [Canis lupus
familiaris]
Length = 1180
Score = 50.1 bits (118), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKV-IPERMPDCSYFLQGLCT-NKNCPYRHVHVNPNASTCE 1977
+C FL+G C D CK H + +R C ++LQG CT +NC Y H N C+
Sbjct: 281 ICKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMH-----NEFPCK 335
Query: 1978 GFLKGY-CADGDECRKKH 1994
+ G C GD C+ H
Sbjct: 336 FYHSGAKCYQGDNCKFSH 353
Score = 48.9 bits (115), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C + C + H + C+ +L+GYC G+ C H+ + C + +
Sbjct: 282 CKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMHNEFPCKFYHSGA 341
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 342 KCYQGDNCKFSH 353
>gi|109104224|ref|XP_001087547.1| PREDICTED: zinc finger CCCH domain-containing protein 6 [Macaca
mulatta]
Length = 1188
Score = 50.1 bits (118), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKV-IPERMPDCSYFLQGLCT-NKNCPYRHVHVNPNASTCE 1977
+C FL+G C D CK H + +R C ++LQG CT +NC Y H N C+
Sbjct: 276 ICKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMH-----NEFPCK 330
Query: 1978 GFLKGY-CADGDECRKKH 1994
+ G C GD C+ H
Sbjct: 331 FYHSGAKCYQGDNCKFSH 348
Score = 48.9 bits (115), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C + C + H + C+ +L+GYC G+ C H+ + C + +
Sbjct: 277 CKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMHNEFPCKFYHSGA 336
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 337 KCYQGDNCKFSH 348
>gi|118766347|ref|NP_940983.2| zinc finger CCCH domain-containing protein 6 [Homo sapiens]
gi|332278115|sp|P61129.2|ZC3H6_HUMAN RecName: Full=Zinc finger CCCH domain-containing protein 6
Length = 1189
Score = 49.7 bits (117), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKV-IPERMPDCSYFLQGLCT-NKNCPYRHVHVNPNASTCE 1977
+C FL+G C D CK H + +R C ++LQG CT +NC Y H N C+
Sbjct: 277 ICKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMH-----NEFPCK 331
Query: 1978 GFLKGY-CADGDECRKKH 1994
+ G C GD C+ H
Sbjct: 332 FYHSGAKCYQGDNCKFSH 349
Score = 48.9 bits (115), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C + C + H + C+ +L+GYC G+ C H+ + C + +
Sbjct: 278 CKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMHNEFPCKFYHSGA 337
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 338 KCYQGDNCKFSH 349
>gi|332024910|gb|EGI65098.1| Protein suppressor of sable [Acromyrmex echinatior]
Length = 1195
Score = 49.7 bits (117), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLC-TNKNCPYRHVHVNP-NASTCEGFLKGYCADGDEC-RKKHSYVCPTFKATG 2005
C Y++QG C +CPY H + P C+ +L CA D+C H + C F
Sbjct: 270 CVYYMQGKCHRGDDCPYSHNALPPRKMELCKFYLMDCCAKRDKCLYMHHDFPCKFFHTGL 329
Query: 2006 SCALGAKCRLHH 2017
C+ G C+ H
Sbjct: 330 KCSQGDNCKFSH 341
>gi|358414296|ref|XP_582657.5| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 6 [Bos taurus]
Length = 1213
Score = 49.7 bits (117), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKV-IPERMPDCSYFLQGLCT-NKNCPYRHVHVNPNASTCE 1977
+C FL+G C D CK H + +R C ++LQG CT +NC Y H N C+
Sbjct: 312 ICKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMH-----NEFPCK 366
Query: 1978 GFLKGY-CADGDECRKKH 1994
+ G C GD C+ H
Sbjct: 367 FYHSGAKCYQGDNCKFSH 384
Score = 48.9 bits (115), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C + C + H + C+ +L+GYC G+ C H+ + C + +
Sbjct: 313 CKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMHNEFPCKFYHSGA 372
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 373 KCYQGDNCKFSH 384
>gi|37360932|dbj|BAC98375.1| KIAA2035 protein [Homo sapiens]
gi|161612054|gb|AAI55541.1| ZC3H6 protein [Homo sapiens]
gi|187468976|gb|AAI67154.1| ZC3H6 protein [Homo sapiens]
Length = 1135
Score = 49.7 bits (117), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKV-IPERMPDCSYFLQGLCT-NKNCPYRHVHVNPNASTCE 1977
+C FL+G C D CK H + +R C ++LQG CT +NC Y H N C+
Sbjct: 223 ICKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMH-----NEFPCK 277
Query: 1978 GFLKGY-CADGDECRKKH 1994
+ G C GD C+ H
Sbjct: 278 FYHSGAKCYQGDNCKFSH 295
Score = 48.5 bits (114), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C + C + H + C+ +L+GYC G+ C H+ + C + +
Sbjct: 224 CKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMHNEFPCKFYHSGA 283
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 284 KCYQGDNCKFSH 295
>gi|298708127|emb|CBJ30469.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 684
Score = 49.7 bits (117), Expect = 0.018, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 9/120 (7%)
Query: 1915 DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNA 1973
D + VC +L+GLC D C HK+ RMP C + + C + C +RH A
Sbjct: 30 DRFRTQVCRHWLRGLCMIGDSCGYLHKMDRNRMPICRW--RTDCQVEGCAFRHEE-EQEA 86
Query: 1974 STCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSRKP 2033
C + +G+C G CR +H +A C A L +P S + R+ P
Sbjct: 87 PECAMYQQGFCRQGPTCRFRH-----VKRAREDCPEVADFSLANPTSLHSNSAGGRAIPP 141
>gi|338713923|ref|XP_001495641.2| PREDICTED: zinc finger CCCH domain-containing protein 6 [Equus
caballus]
Length = 1114
Score = 49.7 bits (117), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKV-IPERMPDCSYFLQGLCT-NKNCPYRHVHVNPNASTCE 1977
+C FL+G C D CK H + +R C ++LQG CT +NC Y H N C+
Sbjct: 208 ICKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMH-----NEFPCK 262
Query: 1978 GFLKGY-CADGDECRKKH 1994
+ G C GD C+ H
Sbjct: 263 FYHSGAKCYQGDNCKFSH 280
Score = 48.5 bits (114), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C + C + H + C+ +L+GYC G+ C H+ + C + +
Sbjct: 209 CKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMHNEFPCKFYHSGA 268
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 269 KCYQGDNCKFSH 280
>gi|334328711|ref|XP_001373157.2| PREDICTED: zinc finger CCCH domain-containing protein 4 [Monodelphis
domestica]
Length = 1297
Score = 49.7 bits (117), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YF++G CT ++C + H + + C+ ++ G+CA + C H + C F TG
Sbjct: 370 CKYFVEGRCTWGEHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKLFHTTG 429
Query: 2006 SCALGAKCRLHH 2017
+C G C H
Sbjct: 430 NCINGDDCMFSH 441
>gi|426226562|ref|XP_004007410.1| PREDICTED: zinc finger CCCH domain-containing protein 6 [Ovis aries]
Length = 1203
Score = 49.7 bits (117), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKV-IPERMPDCSYFLQGLCT-NKNCPYRHVHVNPNASTCE 1977
+C FL+G C D CK H + +R C ++LQG CT +NC Y H N C+
Sbjct: 302 ICKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMH-----NEFPCK 356
Query: 1978 GFLKGY-CADGDECRKKH 1994
+ G C GD C+ H
Sbjct: 357 FYHSGAKCYQGDNCKFSH 374
Score = 48.5 bits (114), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C + C + H + C+ +L+GYC G+ C H+ + C + +
Sbjct: 303 CKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMHNEFPCKFYHSGA 362
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 363 KCYQGDNCKFSH 374
>gi|431908818|gb|ELK12410.1| Putative cleavage and polyadenylation specificity factor subunit
4-like protein [Pteropus alecto]
Length = 224
Score = 49.7 bits (117), Expect = 0.020, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 1894 CQFFTRFGKCNKDNGK-CPYIHDPS-KIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCS 1950
C FF + G C K GK CP HD K+ VC +L+GLC D CK H+ RMP+C
Sbjct: 41 CNFFAK-GLCEK--GKLCPLRHDQGGKVVVCKHWLRGLCKKGDQCKFLHQYDVARMPECY 97
Query: 1951 YF 1952
++
Sbjct: 98 FY 99
Score = 42.7 bits (99), Expect = 2.4, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCTN-KNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSY 1996
C++F +GLC K CP RH C+ +L+G C GD+C+ H Y
Sbjct: 41 CNFFAKGLCEKGKLCPLRHDQ-GGKVVVCKHWLRGLCKKGDQCKFLHQY 88
>gi|390356014|ref|XP_003728683.1| PREDICTED: uncharacterized protein LOC100892284 [Strongylocentrotus
purpuratus]
Length = 1384
Score = 49.7 bits (117), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C ++L+G C +NC Y H + C+ ++ G+C GD C H + C + +
Sbjct: 330 CKFYLEGRCKKGENCTYSHDLTQQRKQELCKFYVSGFCNKGDTCLYMHGEFPCKYYHSGS 389
Query: 2006 SCALGAKCRLHH 2017
C G KCR H
Sbjct: 390 ECFQGDKCRFSH 401
>gi|301777876|ref|XP_002924358.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like
[Ailuropoda melanoleuca]
Length = 1220
Score = 49.7 bits (117), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKV-IPERMPDCSYFLQGLCT-NKNCPYRHVHVNPNASTCE 1977
+C FL+G C D CK H + +R C ++LQG CT +NC Y H N C+
Sbjct: 318 ICKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMH-----NEFPCK 372
Query: 1978 GFLKGY-CADGDECRKKH 1994
+ G C GD C+ H
Sbjct: 373 FYHSGAKCYQGDNCKFSH 390
Score = 48.5 bits (114), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C + C + H + C+ +L+GYC G+ C H+ + C + +
Sbjct: 319 CKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMHNEFPCKFYHSGA 378
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 379 KCYQGDNCKFSH 390
>gi|395507706|ref|XP_003758162.1| PREDICTED: zinc finger CCCH domain-containing protein 6 [Sarcophilus
harrisii]
Length = 1208
Score = 49.7 bits (117), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C + C + H + C+ +++GYC G+ C H+ + C +
Sbjct: 292 CKYFLEGRCIKGDQCKFDHDAELEKKKEICKFYIQGYCTKGENCIYMHNEFPCKFYHTGA 351
Query: 2006 SCALGAKCRLHH 2017
C G KC+ H
Sbjct: 352 KCYQGDKCKFSH 363
>gi|34534836|dbj|BAC87128.1| unnamed protein product [Homo sapiens]
Length = 938
Score = 49.7 bits (117), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKV-IPERMPDCSYFLQGLCT-NKNCPYRHVHVNPNASTCE 1977
+C FL+G C D CK H + +R C ++LQG CT +NC Y H N C+
Sbjct: 79 ICKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMH-----NEFPCK 133
Query: 1978 GFLKGY-CADGDECRKKH 1994
+ G C GD C+ H
Sbjct: 134 FYHSGAKCYQGDNCKFSH 151
Score = 48.1 bits (113), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C + C + H + C+ +L+GYC G+ C H+ + C + +
Sbjct: 80 CKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMHNEFPCKFYHSGA 139
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 140 KCYQGDNCKFSH 151
>gi|350581990|ref|XP_003124854.3| PREDICTED: zinc finger CCCH domain-containing protein 6 [Sus scrofa]
Length = 1101
Score = 49.7 bits (117), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKV-IPERMPDCSYFLQGLCT-NKNCPYRHVHVNPNASTCE 1977
+C FL+G C D CK H + +R C ++LQG CT +NC Y H N C+
Sbjct: 195 ICKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMH-----NEFPCK 249
Query: 1978 GFLKGY-CADGDECRKKH 1994
+ G C GD C+ H
Sbjct: 250 FYHSGAKCYQGDNCKFSH 267
Score = 48.5 bits (114), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C + C + H + C+ +L+GYC G+ C H+ + C + +
Sbjct: 196 CKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMHNEFPCKFYHSGA 255
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 256 KCYQGDNCKFSH 267
>gi|432103062|gb|ELK30396.1| Zinc finger CCCH domain-containing protein 6 [Myotis davidii]
Length = 1248
Score = 49.3 bits (116), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 9/78 (11%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKV-IPERMPDCSYFLQGLCT-NKNCPYRHVHVNPNASTCE 1977
+C FL+G C D CK H + +R C ++LQG CT +NC Y H N C+
Sbjct: 350 ICKYFLEGRCIKGDQCKFDHDAELEKRKEICRFYLQGYCTKGENCIYMH-----NEFPCK 404
Query: 1978 GFLKGY-CADGDECRKKH 1994
+ G C GD+C+ H
Sbjct: 405 FYHSGAKCYQGDKCKFSH 422
Score = 49.3 bits (116), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C + C + H + C +L+GYC G+ C H+ + C + +
Sbjct: 351 CKYFLEGRCIKGDQCKFDHDAELEKRKEICRFYLQGYCTKGENCIYMHNEFPCKFYHSGA 410
Query: 2006 SCALGAKCRLHH 2017
C G KC+ H
Sbjct: 411 KCYQGDKCKFSH 422
>gi|326520181|dbj|BAK04015.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 404
Score = 49.3 bits (116), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 57/137 (41%), Gaps = 25/137 (18%)
Query: 1920 AVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQGLCTNKNCP-YRH-VHVNPN---- 1972
VC F KG C+ D CK +H +R + G + ++ P + H H P
Sbjct: 134 GVCYAFQKGECNRGDACKYSHD--EQRNANT-----GWGSKEDDPKWEHDRHRGPQNKGE 186
Query: 1973 -ASTCEGFLKGYCADGDECRKKHSY--------VCPTFKATGSCALGAKCRLHHPKSRSN 2023
C F KG C+ GD CR H VC F+ G C+ GA CR H + R N
Sbjct: 187 SRGVCYAFQKGECSRGDSCRFSHDEQVAAQGRGVCYAFQ-KGECSRGASCRFSHDEQR-N 244
Query: 2024 GKKSRRSRKPKNTHGRY 2040
R SR+ N +Y
Sbjct: 245 ANTDRGSREDTNARRQY 261
>gi|47077349|dbj|BAD18563.1| unnamed protein product [Homo sapiens]
Length = 892
Score = 49.3 bits (116), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKV-IPERMPDCSYFLQGLCT-NKNCPYRHVHVNPNASTCE 1977
+C FL+G C D CK H + +R C ++LQG CT +NC Y H N C+
Sbjct: 255 ICKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMH-----NEFPCK 309
Query: 1978 GFLKGY-CADGDECRKKH 1994
+ G C GD C+ H
Sbjct: 310 FYHSGAKCYQGDNCKFSH 327
Score = 48.5 bits (114), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C + C + H + C+ +L+GYC G+ C H+ + C + +
Sbjct: 256 CKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMHNEFPCKFYHSGA 315
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 316 KCYQGDNCKFSH 327
>gi|67601164|ref|XP_666378.1| zf-CCCH zinc finger protein [Cryptosporidium hominis TU502]
gi|54657362|gb|EAL36147.1| zf-CCCH zinc finger protein [Cryptosporidium hominis]
Length = 178
Score = 49.3 bits (116), Expect = 0.024, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNK---NCPYRHVHVNPNAST 1975
VC +++ +C D C H+ ERMP C + + G+C ++ NCP++H +
Sbjct: 41 VCRHWIRNMCMKGDFCDFLHQYDYERMPPCFIYQKYGVCVDEALGNCPFKHK--ADDTPL 98
Query: 1976 CEGFLKGYCADGDECRKKH 1994
C + G+C G +C+++H
Sbjct: 99 CAQYFLGFCKYGPKCKRRH 117
>gi|297480025|ref|XP_002707758.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 6 [Bos taurus]
gi|296482845|tpg|DAA24960.1| TPA: suppressor of sable-like [Bos taurus]
Length = 1282
Score = 49.3 bits (116), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKV-IPERMPDCSYFLQGLCT-NKNCPYRHVHVNPNASTCE 1977
+C FL+G C D CK H + +R C ++LQG CT +NC Y H N C+
Sbjct: 381 ICKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMH-----NEFPCK 435
Query: 1978 GFLKGY-CADGDECRKKH 1994
+ G C GD C+ H
Sbjct: 436 FYHSGAKCYQGDNCKFSH 453
Score = 48.1 bits (113), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+G C + C + H + C+ +L+GYC G+ C H+ + C + +
Sbjct: 382 CKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMHNEFPCKFYHSGA 441
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 442 KCYQGDNCKFSH 453
>gi|168063820|ref|XP_001783866.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664598|gb|EDQ51311.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 930
Score = 49.3 bits (116), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 68/159 (42%), Gaps = 27/159 (16%)
Query: 1840 IPRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARKRKYCQFFTR 1899
I RR+ I +DE +G + K RA + A K++ + R R ++++ R
Sbjct: 508 ITRRIKIDSDE-----DGKK-----KTRAPISAERKLKKKIAFRRKRAEKEKELGIRRPR 557
Query: 1900 FGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCS-NSDCKLTHKVIPERMPD-CSYFLQGLC 1957
P K+ +C ++KG C+ C +H V+P D C +F+ C
Sbjct: 558 L----------PVNTFKPKVPLCKFYIKGRCTLGGKCTFSHDVVPVTKSDPCKFFMVNRC 607
Query: 1958 T-NKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKH 1994
+CP+ H + C+ + +G+C DG CR H
Sbjct: 608 LKGDDCPFSHTL---DTFPCKFWHTRGHCLDGSNCRFSH 643
Score = 47.4 bits (111), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 1945 RMPDCSYFLQGLCT-NKNCPYRHVHVNPNAST-CEGFLKGYCADGDECRKKHS---YVCP 1999
++P C ++++G CT C + H V S C+ F+ C GD+C H+ + C
Sbjct: 566 KVPLCKFYIKGRCTLGGKCTFSHDVVPVTKSDPCKFFMVNRCLKGDDCPFSHTLDTFPCK 625
Query: 2000 TFKATGSCALGAKCRLHH 2017
+ G C G+ CR H
Sbjct: 626 FWHTRGHCLDGSNCRFSH 643
>gi|66475446|ref|XP_627539.1| cleavage and polyadenylation specificity factor 4-like; 3x Zn C3H1
domains [Cryptosporidium parvum Iowa II]
gi|32398756|emb|CAD98716.1| zf-CCCH zinc finger protein, possible [Cryptosporidium parvum]
gi|46228992|gb|EAK89841.1| cleavage and polyadenylation specificity factor 4-like; 3x Zn C3H1
domains [Cryptosporidium parvum Iowa II]
Length = 178
Score = 49.3 bits (116), Expect = 0.026, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNK---NCPYRHVHVNPNAST 1975
VC +++ +C D C H+ ERMP C + + G+C ++ NCP++H +
Sbjct: 41 VCRHWIRNMCMKGDFCDFLHQYNYERMPPCFIYQKYGVCVDEALGNCPFKHK--ADDTPL 98
Query: 1976 CEGFLKGYCADGDECRKKH 1994
C + G+C G +C+++H
Sbjct: 99 CAQYFLGFCKYGPKCKRRH 117
>gi|449269255|gb|EMC80049.1| Zinc finger CCCH domain-containing protein 6, partial [Columba livia]
Length = 1029
Score = 49.3 bits (116), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGS 2006
C YFL+G C + C + H + C+ +++GYC G+ C H + C +
Sbjct: 258 CKYFLEGRCIKGEQCKFDHDAEIEKKKEICKFYIQGYCTKGENCIYLH-FPCKFYHTGAK 316
Query: 2007 CALGAKCRLHH 2017
C G KC+ H
Sbjct: 317 CYQGDKCKFSH 327
Score = 45.1 bits (105), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 11/79 (13%)
Query: 1921 VCTKFLKGLC-SNSDCKLTHKV-IPERMPDCSYFLQGLCT-NKNCPYRHVHVNPNASTCE 1977
+C FL+G C CK H I ++ C +++QG CT +NC Y H C+
Sbjct: 257 ICKYFLEGRCIKGEQCKFDHDAEIEKKKEICKFYIQGYCTKGENCIYLHF-------PCK 309
Query: 1978 GFLKGY-CADGDECRKKHS 1995
+ G C GD+C+ H+
Sbjct: 310 FYHTGAKCYQGDKCKFSHA 328
>gi|297740812|emb|CBI30994.3| unnamed protein product [Vitis vinifera]
Length = 485
Score = 49.3 bits (116), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 1935 CKLTHKVIPERMPDCSYF-LQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKK 1993
C H+ RMP C +F L G C ++C Y+H N + C + G+C +G +CR +
Sbjct: 6 CGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHT--NEDIKECNMYKLGFCPNGSDCRYR 63
Query: 1994 HS 1995
H+
Sbjct: 64 HA 65
>gi|281350492|gb|EFB26076.1| hypothetical protein PANDA_013671 [Ailuropoda melanoleuca]
Length = 1161
Score = 49.3 bits (116), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKV-IPERMPDCSYFLQGLCT-NKNCPYRHVHVNPNASTCE 1977
+C FL+G C D CK H + +R C ++LQG CT +NC Y H N C+
Sbjct: 258 ICKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMHN----NEFPCK 313
Query: 1978 GFLKGY-CADGDECRKKH 1994
+ G C GD C+ H
Sbjct: 314 FYHSGAKCYQGDNCKFSH 331
Score = 48.1 bits (113), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKAT 2004
C YFL+G C + C + H + C+ +L+GYC G+ C H+ + C + +
Sbjct: 259 CKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMHNNEFPCKFYHSG 318
Query: 2005 GSCALGAKCRLHH 2017
C G C+ H
Sbjct: 319 AKCYQGDNCKFSH 331
>gi|159114016|ref|XP_001707233.1| Zinc finger domain [Giardia lamblia ATCC 50803]
gi|157435337|gb|EDO79559.1| Zinc finger domain protein [Giardia lamblia ATCC 50803]
Length = 264
Score = 48.9 bits (115), Expect = 0.030, Method: Composition-based stats.
Identities = 46/189 (24%), Positives = 78/189 (41%), Gaps = 24/189 (12%)
Query: 1891 RKYCQFFTRFGKCNKDNGKCPYIHDPS--KIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
+ C+ + R +C K + C +IH+ + K+ +C KF C+N C HK +R
Sbjct: 41 KTVCKHYIR-DQCKKGD-DCEFIHEYAIDKLDLC-KFGDN-CTNHYCIYNHKS-SKRADV 95
Query: 1949 CSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--------YVCPT 2000
C F +G+C NK C RH+ + C +L G+C +G C +H Y
Sbjct: 96 CYSFARGVCLNKTCDSRHIVY----TLCPRYLAGFCPEGPNCTMQHPQLSGPITIYTRQV 151
Query: 2001 FKATGSCALGAKCRLHHPKSRSNGKKSRRSRKPKNTHGRYFGSMLVEDSESQTAMSERPT 2060
K G + C +H + ++ R + + G +ED+ T M +
Sbjct: 152 MKKPGYIGHCSHCCKYHGDAHELTDNDKKDR-----YNAHHGQTSIEDNTDFTGMLLQCP 206
Query: 2061 VQNNGNLFV 2069
+G+ V
Sbjct: 207 AAKDGSRLV 215
>gi|350423962|ref|XP_003493646.1| PREDICTED: hypothetical protein LOC100744710 [Bombus impatiens]
Length = 1237
Score = 48.9 bits (115), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLC-TNKNCPYRHVHVNP-NASTCEGFLKGYCADGDEC-RKKHSYVCPTFKATG 2005
C Y++QG C +CP+ H + P C+ +L CA D+C H + C F
Sbjct: 257 CVYYMQGKCHRGDDCPFSHNALPPRKMELCKFYLMDCCAKRDKCLYMHHDFPCKFFHTGL 316
Query: 2006 SCALGAKCRLHH 2017
C+ G C+ H
Sbjct: 317 KCSQGENCKFSH 328
Score = 47.8 bits (112), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 14/100 (14%)
Query: 1899 RFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLC-SNSDCKLTHKVIPER-MPDCSYFLQGL 1956
R G+ N++N H+ A+C +++G C DC +H +P R M C ++L
Sbjct: 239 RNGRRNQNND-----HNQDPDAICVYYMQGKCHRGDDCPFSHNALPPRKMELCKFYLMDC 293
Query: 1957 CTNKN-CPYRHVHVNPNASTCEGFLKGY-CADGDECRKKH 1994
C ++ C Y H H P C+ F G C+ G+ C+ H
Sbjct: 294 CAKRDKCLYMH-HDFP----CKFFHTGLKCSQGENCKFSH 328
>gi|281200485|gb|EFA74704.1| CCCH-type zinc finger-containing protein [Polysphondylium pallidum
PN500]
Length = 1448
Score = 48.9 bits (115), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 11/81 (13%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHD----PSKIAVCTKFLKGLC-SNSDCKLTHKVIPERMPD 1948
CQF+ + G CNK + +C + H+ KI +C F G C S+C +H + ++
Sbjct: 1161 CQFY-KLGMCNKGD-ECTFKHEGPVPEKKIELCKFFKMGSCLKGSECTFSHDL---KLDP 1215
Query: 1949 CSYF-LQGLCTNKNCPYRHVH 1968
C +F CTNK+CPY H +
Sbjct: 1216 CKFFNGPAGCTNKDCPYGHFY 1236
>gi|440909449|gb|ELR59358.1| Zinc finger CCCH domain-containing protein 6, partial [Bos grunniens
mutus]
Length = 1171
Score = 48.9 bits (115), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKV-IPERMPDCSYFLQGLCT-NKNCPYRHVHVNPNASTCE 1977
+C FL+G C D CK H + +R C ++LQG CT +NC Y H N C+
Sbjct: 269 ICKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMHN----NEFPCK 324
Query: 1978 GFLKGY-CADGDECRKKH 1994
+ G C GD C+ H
Sbjct: 325 FYHSGAKCYQGDNCKFSH 342
Score = 48.1 bits (113), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKAT 2004
C YFL+G C + C + H + C+ +L+GYC G+ C H+ + C + +
Sbjct: 270 CKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMHNNEFPCKFYHSG 329
Query: 2005 GSCALGAKCRLHH 2017
C G C+ H
Sbjct: 330 AKCYQGDNCKFSH 342
>gi|308161394|gb|EFO63843.1| Zinc finger domain-containing protein [Giardia lamblia P15]
Length = 264
Score = 48.9 bits (115), Expect = 0.034, Method: Composition-based stats.
Identities = 44/175 (25%), Positives = 73/175 (41%), Gaps = 24/175 (13%)
Query: 1891 RKYCQFFTRFGKCNKDNGKCPYIHDPS--KIAVCTKFLKGLCSNSDCKLTHKVIPERMPD 1948
+ C+ + R +C K + C +IH+ + K+ +C KF C+N C HK +R
Sbjct: 41 KTVCKHYIR-DQCKKGD-DCEFIHEYAIDKLDLC-KFGDN-CTNHYCIYNHKS-SKRADV 95
Query: 1949 CSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--------YVCPT 2000
C F +G+C NK C RH+ + C +L G+C +G C +H Y
Sbjct: 96 CYSFARGVCLNKTCDSRHIVY----TLCPRYLAGFCPEGPNCTMQHPQLSGPITIYTRQV 151
Query: 2001 FKATGSCALGAKCRLHHPKSRSNGKKSRRSRKPKNTHGRYFGSMLVEDSESQTAM 2055
K G + C +H + ++ R + + G +ED+ T M
Sbjct: 152 MKKPGYIGHCSHCCKYHGDAHELTDNDKKDR-----YNAHHGQTSIEDNTDFTGM 201
>gi|340726374|ref|XP_003401534.1| PREDICTED: hypothetical protein LOC100649901 [Bombus terrestris]
Length = 1234
Score = 48.9 bits (115), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLC-TNKNCPYRHVHVNP-NASTCEGFLKGYCADGDEC-RKKHSYVCPTFKATG 2005
C Y++QG C +CP+ H + P C+ +L CA D+C H + C F
Sbjct: 257 CVYYMQGKCHRGDDCPFSHNALPPRKMELCKFYLMDCCAKRDKCLYMHHDFPCKFFHTGL 316
Query: 2006 SCALGAKCRLHH 2017
C+ G C+ H
Sbjct: 317 KCSQGENCKFSH 328
Score = 47.8 bits (112), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 14/100 (14%)
Query: 1899 RFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLC-SNSDCKLTHKVIPER-MPDCSYFLQGL 1956
R G+ N++N H+ A+C +++G C DC +H +P R M C ++L
Sbjct: 239 RNGRRNQNND-----HNQDPDAICVYYMQGKCHRGDDCPFSHNALPPRKMELCKFYLMDC 293
Query: 1957 CTNKN-CPYRHVHVNPNASTCEGFLKGY-CADGDECRKKH 1994
C ++ C Y H H P C+ F G C+ G+ C+ H
Sbjct: 294 CAKRDKCLYMH-HDFP----CKFFHTGLKCSQGENCKFSH 328
>gi|68065109|ref|XP_674539.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56493179|emb|CAH99061.1| conserved hypothetical protein [Plasmodium berghei]
Length = 277
Score = 48.9 bits (115), Expect = 0.035, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 44/99 (44%), Gaps = 22/99 (22%)
Query: 1890 KRKYCQFFTRFGKCNK-DNGKCPYIHDPS---------KIAVCTKFLKGLC--SNSDCKL 1937
K K C + KC + N CPY HD + K A+C F+K +C S +CK
Sbjct: 121 KTKMCPYMNTKEKCKRFSNNMCPYAHDQNELKPIPNLYKTAMCRNFMKNMCFKSKKECKF 180
Query: 1938 THKVIPERMPD-------CSYFLQGLC-TNKNCPYRHVH 1968
H V R D C +FL G C +KNC RH H
Sbjct: 181 AHHVEELRSTDEFYKTTLCKFFLNGYCKADKNC--RHAH 217
>gi|326524087|dbj|BAJ97054.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 48.9 bits (115), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 7/88 (7%)
Query: 1936 KLTHKVIPERMPDCSYFLQGLCTNKN-CPYRHVHVNP--NASTCEGFLKGYCADGDECRK 1992
KL + P+ + C +++ G C N C + H P + C F +G C GDEC
Sbjct: 402 KLAPVIKPKPVKFCHFYMHGKCQLGNACKFSH-DTTPLTKSKPCTHFARGSCLKGDECPY 460
Query: 1993 KHS---YVCPTFKATGSCALGAKCRLHH 2017
H Y C F G C G KC+ H
Sbjct: 461 DHELSKYPCHNFVENGMCFRGDKCKFSH 488
>gi|410910570|ref|XP_003968763.1| PREDICTED: zinc finger CCCH domain-containing protein 4-like
[Takifugu rubripes]
Length = 1378
Score = 48.5 bits (114), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C Y+++G CT +C + H V + C+ ++ G+CA D C H + C F TG
Sbjct: 385 CKYYIEGRCTWGDHCNFSHDVDLPKKKELCKFYITGFCARADHCPYMHGEFPCKLFHTTG 444
Query: 2006 SCALGAKCRLHH 2017
+C +C H
Sbjct: 445 NCVNNDECMFSH 456
>gi|255576147|ref|XP_002528968.1| zinc finger protein, putative [Ricinus communis]
gi|223531614|gb|EEF33442.1| zinc finger protein, putative [Ricinus communis]
Length = 456
Score = 48.5 bits (114), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 48/115 (41%), Gaps = 23/115 (20%)
Query: 1922 CTKFLK-GLCS-NSDCKLTHKV-----------IPERM--PDCSYFLQ-GLC-TNKNCPY 1964
C +L+ GLC ++C+ H +PER+ PDC Y+L+ G C C Y
Sbjct: 60 CVYYLRTGLCGYGNNCRFNHPPYAAQGNQFKEELPERVGQPDCGYYLKTGTCKYGSTCKY 119
Query: 1965 RHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPK 2019
H A + G DE CP + TGSC G C+ HHP+
Sbjct: 120 HHPRDRNGAGPVSFNIVGLPMRQDE------KSCPYYMRTGSCKFGVACKFHHPQ 168
>gi|74199726|dbj|BAE43147.1| unnamed protein product [Mus musculus]
Length = 113
Score = 48.1 bits (113), Expect = 0.049, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Query: 1928 GLCSNSDCKLTHKVIPERMPDCSYFLQGLCTNKN--CPYRHVHVNPNASTCEGFLKGYCA 1985
G CSN +C H ++ DC ++ G C C YRHVH C + G+C
Sbjct: 11 GNCSNKECLFLHLKPVLKLQDCPWYNLGFCKEVGPLCKYRHVH----QVLCPNYFTGFCP 66
Query: 1986 DGDECRKKHSYVCP 1999
+G +C+ H + P
Sbjct: 67 EGPQCQFGHPKMSP 80
Score = 42.7 bits (99), Expect = 2.6, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 1955 GLCTNKNCPYRHVHVNPNASTCEGFLKGYCAD-GDECRKKHSY--VCPTFKATGSCALGA 2011
G C+NK C + H+ C + G+C + G C+ +H + +CP + TG C G
Sbjct: 11 GNCSNKECLFLHLKPVLKLQDCPWYNLGFCKEVGPLCKYRHVHQVLCPNY-FTGFCPEGP 69
Query: 2012 KCRLHHPK 2019
+C+ HPK
Sbjct: 70 QCQFGHPK 77
>gi|359320205|ref|XP_003639279.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation specific
factor 4-like [Canis lupus familiaris]
Length = 134
Score = 48.1 bits (113), Expect = 0.051, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 42/113 (37%), Gaps = 25/113 (22%)
Query: 1920 AVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGF 1979
AVC F KGLC DC NK CP+ HV C +
Sbjct: 40 AVCNFFAKGLCEKGDC----------------------NNKECPFLHVTPAFKTRDCPWY 77
Query: 1980 LKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRS 2030
+G+C DG C++ H +C + G C G C+ + + + RS
Sbjct: 78 DQGFCKDGPLCKQCHVRKIMCVNY-LVGVCPKGPHCQFAQAQEQEICSQLARS 129
>gi|357123042|ref|XP_003563222.1| PREDICTED: zinc finger CCCH domain-containing protein 25-like
[Brachypodium distachyon]
Length = 385
Score = 48.1 bits (113), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 59/138 (42%), Gaps = 26/138 (18%)
Query: 1920 AVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRH-VHVNP-----N 1972
VC F KG C+ D C+ +H +R + + G + N + H H +P
Sbjct: 134 GVCYAFQKGECNRGDACRYSHD--EQRNANTGW---GSKEDINPKWEHDRHRDPPNKGEF 188
Query: 1973 ASTCEGFLKGYCADGDECRKKHSY--------VCPTFKATGSCALGAKCRLHHPKSRS-- 2022
C F KG C+ GD CR H +C F+ G C GA CR H + R+
Sbjct: 189 RGVCYAFQKGECSRGDSCRFSHDEQVAVQARGICYAFQ-KGECNRGASCRFSHDEERNAD 247
Query: 2023 ---NGKKSRRSRKPKNTH 2037
+ K+ R +R+ ++ H
Sbjct: 248 AGRSSKEDRNARRDQDRH 265
>gi|384493669|gb|EIE84160.1| hypothetical protein RO3G_08870 [Rhizopus delemar RA 99-880]
Length = 176
Score = 48.1 bits (113), Expect = 0.057, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 1946 MPDCSYFLQ-GLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKH--SYVCPTF 2001
MP+C ++ + G C N + C Y H+ C + +G+C G CR KH VC +
Sbjct: 1 MPECWFYSKYGECCNGDECMYLHIDPESKQKECPWYARGFCKHGPNCRNKHVRKLVCQNY 60
Query: 2002 KATGSCALGAKCRLHHPK 2019
TG C G C HPK
Sbjct: 61 -VTGFCPDGLNCPNGHPK 77
>gi|224129058|ref|XP_002320490.1| predicted protein [Populus trichocarpa]
gi|222861263|gb|EEE98805.1| predicted protein [Populus trichocarpa]
Length = 446
Score = 48.1 bits (113), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 53/120 (44%), Gaps = 23/120 (19%)
Query: 1922 CTKFLK-GLCS-NSDCKLTHKV-----------IPERM--PDCSYFLQ-GLC-TNKNCPY 1964
C +L+ GLC S+C+ H V +PER+ PDC Y+L+ G C C Y
Sbjct: 55 CGYYLRTGLCGYGSNCRFNHPVYAALGAQLREELPERVGQPDCGYYLKTGTCKYGSTCKY 114
Query: 1965 RHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNG 2024
H P G + + A G R+ CP + T SC G C+ HHP+ S G
Sbjct: 115 HH----PRDRNGAGPVS-FNALGLPMRQDEK-SCPYYMRTRSCKFGVACKFHHPQPASLG 168
>gi|391330983|ref|XP_003739930.1| PREDICTED: E3 ubiquitin-protein ligase makorin-1-like [Metaseiulus
occidentalis]
Length = 390
Score = 48.1 bits (113), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 46/102 (45%), Gaps = 14/102 (13%)
Query: 1976 CEGFLKGYCADGDECRKKHSY-------VCPTFKATGSCALGAKCRLHHPKSRSNGKKSR 2028
C FL C DGD+CR H VC F+ GSC GA+CR H + SNG K
Sbjct: 11 CRYFLSNTCRDGDQCRFSHDRTTGIVDNVCRYFQ-KGSCRYGARCRYDHIRKHSNGNKEL 69
Query: 2029 RSRKPKNTHGRYFGSMLVEDSESQTAMSERPTVQNNGNLFVE 2070
S+ GR F + + ++ S +V+ G FV+
Sbjct: 70 ISK------GRQFKNDVNQNPHSAGPSCSTSSVRTEGKSFVD 105
>gi|397493264|ref|XP_003817530.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 4 [Pan paniscus]
Length = 1262
Score = 48.1 bits (113), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YF++G CT +C + H + + C+ ++ G+CA + C H + C + TG
Sbjct: 355 CKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTTG 414
Query: 2006 SCALGAKCRLHH 2017
+C G C H
Sbjct: 415 NCINGDDCMFSH 426
>gi|380024331|ref|XP_003695954.1| PREDICTED: uncharacterized protein LOC100868016 [Apis florea]
Length = 1230
Score = 47.8 bits (112), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLC-TNKNCPYRHVHVNP-NASTCEGFLKGYCADGDEC-RKKHSYVCPTFKATG 2005
C Y++QG C +CP+ H + P C+ +L CA D+C H + C F
Sbjct: 255 CVYYMQGKCHRGDDCPFSHNALPPRKMELCKFYLMDCCAKRDKCLYMHHDFPCKFFHTGL 314
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 315 KCNQGENCKFSH 326
Score = 47.0 bits (110), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 14/100 (14%)
Query: 1899 RFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLC-SNSDCKLTHKVIPER-MPDCSYFLQGL 1956
R G+ N++N H+ A+C +++G C DC +H +P R M C ++L
Sbjct: 237 RNGRRNQNND-----HNQDPDAICVYYMQGKCHRGDDCPFSHNALPPRKMELCKFYLMDC 291
Query: 1957 CTNKN-CPYRHVHVNPNASTCEGFLKGY-CADGDECRKKH 1994
C ++ C Y H H P C+ F G C G+ C+ H
Sbjct: 292 CAKRDKCLYMH-HDFP----CKFFHTGLKCNQGENCKFSH 326
>gi|356501261|ref|XP_003519444.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like isoform
1 [Glycine max]
gi|356501263|ref|XP_003519445.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like isoform
2 [Glycine max]
Length = 415
Score = 47.8 bits (112), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 56/135 (41%), Gaps = 25/135 (18%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPER--MPDCSY 1951
C ++ R G C C Y H P+ I++ T + + L P+R PDC Y
Sbjct: 50 CLYYLRTGMCGYGT-NCRY-HHPAHISIGTHYGEEL-------------PQRAGQPDCEY 94
Query: 1952 FLQ-GLC-TNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCAL 2009
FL+ G C C Y H A+ + G R++ CP + TGSC
Sbjct: 95 FLKTGTCKYGSTCKYHHPKDRRGAAPVS-----FNTLGLPMRQEEK-SCPYYMRTGSCKF 148
Query: 2010 GAKCRLHHPKSRSNG 2024
G C+ HHP+ S G
Sbjct: 149 GVACKFHHPQHASLG 163
>gi|222618708|gb|EEE54840.1| hypothetical protein OsJ_02295 [Oryza sativa Japonica Group]
Length = 698
Score = 47.8 bits (112), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 7/103 (6%)
Query: 1936 KLTHKVIPERMPDCSYFLQGLCTNKN-CPYRHVHVNP--NASTCEGFLKGYCADGDECRK 1992
KL + P+ + C ++L G C N C + H P + C + +G C GD+C
Sbjct: 422 KLQPVIKPKVVKVCHFYLHGKCQQGNLCKFSH-DTTPLTKSKPCTHYARGSCLKGDDCPY 480
Query: 1993 KHS---YVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSRK 2032
H Y C F G C G KC+ H + G + ++K
Sbjct: 481 DHELSKYPCHNFMENGMCIRGDKCKFSHVIPTAEGPSTPDAKK 523
>gi|348557694|ref|XP_003464654.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 4-like [Cavia porcellus]
Length = 1306
Score = 47.8 bits (112), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YF++G CT +C + H + + C+ ++ G+CA + C H + C + TG
Sbjct: 396 CKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTTG 455
Query: 2006 SCALGAKCRLHH 2017
+C G C H
Sbjct: 456 NCINGDDCMFSH 467
>gi|75275745|sp|Q657B3.1|C3H7_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 7;
Short=OsC3H7
gi|52076312|dbj|BAD45097.1| zinc finger (CCCH-type) protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 47.8 bits (112), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 7/103 (6%)
Query: 1936 KLTHKVIPERMPDCSYFLQGLCTNKN-CPYRHVHVNP--NASTCEGFLKGYCADGDECRK 1992
KL + P+ + C ++L G C N C + H P + C + +G C GD+C
Sbjct: 422 KLQPVIKPKVVKVCHFYLHGKCQQGNLCKFSH-DTTPLTKSKPCTHYARGSCLKGDDCPY 480
Query: 1993 KHS---YVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSRK 2032
H Y C F G C G KC+ H + G + ++K
Sbjct: 481 DHELSKYPCHNFMENGMCIRGDKCKFSHVIPTAEGPSTPDAKK 523
>gi|218188502|gb|EEC70929.1| hypothetical protein OsI_02512 [Oryza sativa Indica Group]
Length = 698
Score = 47.8 bits (112), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 7/103 (6%)
Query: 1936 KLTHKVIPERMPDCSYFLQGLCTNKN-CPYRHVHVNP--NASTCEGFLKGYCADGDECRK 1992
KL + P+ + C ++L G C N C + H P + C + +G C GD+C
Sbjct: 422 KLQPVIKPKVVKVCHFYLHGKCQQGNLCKFSH-DTTPLTKSKPCTHYARGSCLKGDDCPY 480
Query: 1993 KHS---YVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSRK 2032
H Y C F G C G KC+ H + G + ++K
Sbjct: 481 DHELSKYPCHNFMENGMCIRGDKCKFSHVIPTAEGPSTPDAKK 523
>gi|161169020|ref|NP_941033.2| zinc finger CCCH domain-containing protein 4 [Mus musculus]
Length = 1255
Score = 47.8 bits (112), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YF++G CT +C + H + + C+ ++ G+CA + C H + C + TG
Sbjct: 346 CKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTTG 405
Query: 2006 SCALGAKCRLHH 2017
+C G C H
Sbjct: 406 NCINGDDCMFSH 417
>gi|332856348|ref|XP_524315.3| PREDICTED: zinc finger CCCH domain-containing protein 4 [Pan
troglodytes]
Length = 1262
Score = 47.8 bits (112), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YF++G CT +C + H + + C+ ++ G+CA + C H + C + TG
Sbjct: 355 CKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTTG 414
Query: 2006 SCALGAKCRLHH 2017
+C G C H
Sbjct: 415 NCINGDDCMFSH 426
>gi|335892835|ref|NP_001229447.1| uncharacterized protein LOC100578262 [Apis mellifera]
Length = 1229
Score = 47.8 bits (112), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLC-TNKNCPYRHVHVNP-NASTCEGFLKGYCADGDEC-RKKHSYVCPTFKATG 2005
C Y++QG C +CP+ H + P C+ +L CA D+C H + C F
Sbjct: 254 CVYYMQGKCHRGDDCPFSHNALPPRKMELCKFYLMDCCAKRDKCLYMHHDFPCKFFHTGL 313
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 314 KCNQGENCKFSH 325
Score = 46.6 bits (109), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 14/100 (14%)
Query: 1899 RFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLC-SNSDCKLTHKVIPER-MPDCSYFLQGL 1956
R G+ N++N H+ A+C +++G C DC +H +P R M C ++L
Sbjct: 236 RNGRRNQNND-----HNQDPDAICVYYMQGKCHRGDDCPFSHNALPPRKMELCKFYLMDC 290
Query: 1957 CTNKN-CPYRHVHVNPNASTCEGFLKGY-CADGDECRKKH 1994
C ++ C Y H H P C+ F G C G+ C+ H
Sbjct: 291 CAKRDKCLYMH-HDFP----CKFFHTGLKCNQGENCKFSH 325
>gi|347829984|emb|CCD45681.1| similar to transcription factor Zn, C2H2 [Botryotinia fuckeliana]
Length = 914
Score = 47.8 bits (112), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 43/103 (41%), Gaps = 15/103 (14%)
Query: 1917 SKIAVCTKFLKGLCSNS-DCKLTHKVIPER-------MPDCSYFLQGLCT-NKNCPYRH- 1966
+K+ C KG C DC +H P P CS+F +G C NCP+ H
Sbjct: 57 TKLIACRFLAKGHCQKGEDCPFSHGTEPAAPSQKSSVTPLCSFFARGRCQRGDNCPFSHE 116
Query: 1967 VHV-----NPNASTCEGFLKGYCADGDECRKKHSYVCPTFKAT 2004
+ V P +TC F +G C G C H+ + P K T
Sbjct: 117 IEVETSSETPFRTTCSFFSRGKCTRGSNCLYLHTSIVPDHKET 159
>gi|327284661|ref|XP_003227055.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like [Anolis
carolinensis]
Length = 1179
Score = 47.8 bits (112), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+ C + C + H + C+ +++GYC G+ C H+ + C +
Sbjct: 279 CKYFLEARCIKGDQCKFDHDAEIEKKKEICKFYIQGYCTKGENCIYMHNEFPCKFYHTGA 338
Query: 2006 SCALGAKCRLHH 2017
C G KC+ H
Sbjct: 339 KCYHGDKCKFSH 350
Score = 45.8 bits (107), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKV-IPERMPDCSYFLQGLCT-NKNCPYRHVHVNPNASTCE 1977
+C FL+ C D CK H I ++ C +++QG CT +NC Y H N C+
Sbjct: 278 ICKYFLEARCIKGDQCKFDHDAEIEKKKEICKFYIQGYCTKGENCIYMH-----NEFPCK 332
Query: 1978 GFLKGY-CADGDECRKKH 1994
+ G C GD+C+ H
Sbjct: 333 FYHTGAKCYHGDKCKFSH 350
>gi|164659544|ref|XP_001730896.1| hypothetical protein MGL_1895 [Malassezia globosa CBS 7966]
gi|159104794|gb|EDP43682.1| hypothetical protein MGL_1895 [Malassezia globosa CBS 7966]
Length = 197
Score = 47.8 bits (112), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 1915 DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKN-CPYRHVHVNP 1971
D S+ VC +L+GLC D C H+ RMP+C ++ G C + + C Y H+ +
Sbjct: 120 DVSRRTVCKHWLRGLCKKGDLCDYLHEYDLRRMPECRFYATFGFCNSSDECLYIHIDPSV 179
Query: 1972 NASTCEGFLKGYCADG 1987
CE + +G+C G
Sbjct: 180 KRRRCERYERGFCELG 195
>gi|345785598|ref|XP_854983.2| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 4 [Canis lupus familiaris]
Length = 1251
Score = 47.8 bits (112), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YF++G CT +C + H + + C+ ++ G+CA + C H + C + TG
Sbjct: 368 CKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTTG 427
Query: 2006 SCALGAKCRLHH 2017
+C G C H
Sbjct: 428 NCINGDDCMFSH 439
>gi|154323822|ref|XP_001561225.1| hypothetical protein BC1G_00310 [Botryotinia fuckeliana B05.10]
Length = 913
Score = 47.8 bits (112), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 43/103 (41%), Gaps = 15/103 (14%)
Query: 1917 SKIAVCTKFLKGLCSNS-DCKLTHKVIPER-------MPDCSYFLQGLCT-NKNCPYRH- 1966
+K+ C KG C DC +H P P CS+F +G C NCP+ H
Sbjct: 56 TKLIACRFLAKGHCQKGEDCPFSHGTEPAAPSQKSSVTPLCSFFARGRCQRGDNCPFSHE 115
Query: 1967 VHV-----NPNASTCEGFLKGYCADGDECRKKHSYVCPTFKAT 2004
+ V P +TC F +G C G C H+ + P K T
Sbjct: 116 IEVETSSETPFRTTCSFFSRGKCTRGSNCLYLHTSIVPDHKET 158
>gi|126723060|ref|NP_055983.1| zinc finger CCCH domain-containing protein 4 [Homo sapiens]
gi|94707996|sp|Q9UPT8.3|ZC3H4_HUMAN RecName: Full=Zinc finger CCCH domain-containing protein 4
gi|168269654|dbj|BAG09954.1| zinc finger CCCH domain-containing protein C19orf7 [synthetic
construct]
Length = 1303
Score = 47.8 bits (112), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YF++G CT +C + H + + C+ ++ G+CA + C H + C + TG
Sbjct: 396 CKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTTG 455
Query: 2006 SCALGAKCRLHH 2017
+C G C H
Sbjct: 456 NCINGDDCMFSH 467
>gi|37360214|dbj|BAC98085.1| mKIAA1064 protein [Mus musculus]
Length = 912
Score = 47.8 bits (112), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YF++G CT +C + H + + C+ ++ G+CA + C H + C + TG
Sbjct: 86 CKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTTG 145
Query: 2006 SCALGAKCRLHH 2017
+C G C H
Sbjct: 146 NCINGDDCMFSH 157
>gi|395854222|ref|XP_003799597.1| PREDICTED: zinc finger CCCH domain-containing protein 4 [Otolemur
garnettii]
Length = 1305
Score = 47.8 bits (112), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YF++G CT +C + H + + C+ ++ G+CA + C H + C + TG
Sbjct: 396 CKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTTG 455
Query: 2006 SCALGAKCRLHH 2017
+C G C H
Sbjct: 456 NCINGDDCMFSH 467
>gi|441656346|ref|XP_003277707.2| PREDICTED: zinc finger CCCH domain-containing protein 4 [Nomascus
leucogenys]
Length = 1197
Score = 47.8 bits (112), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YF++G CT +C + H + + C+ ++ G+CA + C H + C + TG
Sbjct: 361 CKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTTG 420
Query: 2006 SCALGAKCRLHH 2017
+C G C H
Sbjct: 421 NCINGDDCMFSH 432
>gi|410982740|ref|XP_003997706.1| PREDICTED: zinc finger CCCH domain-containing protein 4 [Felis catus]
Length = 1278
Score = 47.8 bits (112), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YF++G CT +C + H + + C+ ++ G+CA + C H + C + TG
Sbjct: 368 CKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTTG 427
Query: 2006 SCALGAKCRLHH 2017
+C G C H
Sbjct: 428 NCINGDDCMFSH 439
>gi|392343941|ref|XP_001053214.2| PREDICTED: zinc finger CCCH domain-containing protein 4-like [Rattus
norvegicus]
Length = 1255
Score = 47.8 bits (112), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YF++G CT +C + H + + C+ ++ G+CA + C H + C + TG
Sbjct: 346 CKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTTG 405
Query: 2006 SCALGAKCRLHH 2017
+C G C H
Sbjct: 406 NCINGDDCMFSH 417
>gi|109125346|ref|XP_001109916.1| PREDICTED: zinc finger CCCH domain-containing protein 4-like [Macaca
mulatta]
Length = 1303
Score = 47.8 bits (112), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YF++G CT +C + H + + C+ ++ G+CA + C H + C + TG
Sbjct: 396 CKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTTG 455
Query: 2006 SCALGAKCRLHH 2017
+C G C H
Sbjct: 456 NCINGDDCMFSH 467
>gi|426389358|ref|XP_004061090.1| PREDICTED: zinc finger CCCH domain-containing protein 4 [Gorilla
gorilla gorilla]
Length = 1303
Score = 47.8 bits (112), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YF++G CT +C + H + + C+ ++ G+CA + C H + C + TG
Sbjct: 396 CKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTTG 455
Query: 2006 SCALGAKCRLHH 2017
+C G C H
Sbjct: 456 NCINGDDCMFSH 467
>gi|383847983|ref|XP_003699632.1| PREDICTED: uncharacterized protein LOC100879098 [Megachile rotundata]
Length = 1236
Score = 47.8 bits (112), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLC-TNKNCPYRHVHVNP-NASTCEGFLKGYCADGDEC-RKKHSYVCPTFKATG 2005
C Y++QG C +CP+ H + P C+ +L CA D+C H + C F
Sbjct: 254 CVYYMQGKCHRGDDCPFSHNALPPRKMELCKFYLMDCCAKRDKCLYMHHDFPCKFFHTGL 313
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 314 KCNQGENCKFSH 325
Score = 46.6 bits (109), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 14/100 (14%)
Query: 1899 RFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLC-SNSDCKLTHKVIPER-MPDCSYFLQGL 1956
R G+ N++N H+ A+C +++G C DC +H +P R M C ++L
Sbjct: 236 RNGRRNQNND-----HNQDPDAICVYYMQGKCHRGDDCPFSHNALPPRKMELCKFYLMDC 290
Query: 1957 CTNKN-CPYRHVHVNPNASTCEGFLKGY-CADGDECRKKH 1994
C ++ C Y H H P C+ F G C G+ C+ H
Sbjct: 291 CAKRDKCLYMH-HDFP----CKFFHTGLKCNQGENCKFSH 325
>gi|94708083|sp|Q6ZPZ3.2|ZC3H4_MOUSE RecName: Full=Zinc finger CCCH domain-containing protein 4
Length = 1304
Score = 47.8 bits (112), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YF++G CT +C + H + + C+ ++ G+CA + C H + C + TG
Sbjct: 395 CKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTTG 454
Query: 2006 SCALGAKCRLHH 2017
+C G C H
Sbjct: 455 NCINGDDCMFSH 466
>gi|402906061|ref|XP_003915825.1| PREDICTED: zinc finger CCCH domain-containing protein 4 [Papio
anubis]
Length = 1303
Score = 47.8 bits (112), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YF++G CT +C + H + + C+ ++ G+CA + C H + C + TG
Sbjct: 396 CKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTTG 455
Query: 2006 SCALGAKCRLHH 2017
+C G C H
Sbjct: 456 NCINGDDCMFSH 467
>gi|345781324|ref|XP_851764.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase makorin-1
[Canis lupus familiaris]
Length = 483
Score = 47.8 bits (112), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCTN-KNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
CSYF+ G+C NC Y H + +P C+ F +GYC GD CR +HS
Sbjct: 62 CSYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCIYGDRCRYEHS 110
>gi|20521750|dbj|BAA83016.2| KIAA1064 protein [Homo sapiens]
Length = 1315
Score = 47.8 bits (112), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YF++G CT +C + H + + C+ ++ G+CA + C H + C + TG
Sbjct: 408 CKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTTG 467
Query: 2006 SCALGAKCRLHH 2017
+C G C H
Sbjct: 468 NCINGDDCMFSH 479
>gi|335289860|ref|XP_003127290.2| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 4-like [Sus scrofa]
Length = 1254
Score = 47.8 bits (112), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YF++G CT +C + H + + C+ ++ G+CA + C H + C + TG
Sbjct: 349 CKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTTG 408
Query: 2006 SCALGAKCRLHH 2017
+C G C H
Sbjct: 409 NCINGDDCMFSH 420
>gi|344269381|ref|XP_003406531.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 4-like [Loxodonta africana]
Length = 1363
Score = 47.8 bits (112), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YF++G CT +C + H + + C+ ++ G+CA + C H + C + TG
Sbjct: 452 CKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTTG 511
Query: 2006 SCALGAKCRLHH 2017
+C G C H
Sbjct: 512 NCINGDDCMFSH 523
>gi|301775348|ref|XP_002923106.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 4-like [Ailuropoda melanoleuca]
Length = 1228
Score = 47.8 bits (112), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YF++G CT +C + H + + C+ ++ G+CA + C H + C + TG
Sbjct: 357 CKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTTG 416
Query: 2006 SCALGAKCRLHH 2017
+C G C H
Sbjct: 417 NCINGDDCMFSH 428
>gi|392337471|ref|XP_002725579.2| PREDICTED: zinc finger CCCH domain-containing protein 4-like [Rattus
norvegicus]
Length = 1263
Score = 47.8 bits (112), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YF++G CT +C + H + + C+ ++ G+CA + C H + C + TG
Sbjct: 354 CKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTTG 413
Query: 2006 SCALGAKCRLHH 2017
+C G C H
Sbjct: 414 NCINGDDCMFSH 425
>gi|291413326|ref|XP_002722929.1| PREDICTED: zinc finger CCCH-type containing 4 [Oryctolagus cuniculus]
Length = 1277
Score = 47.8 bits (112), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YF++G CT +C + H + + C+ ++ G+CA + C H + C + TG
Sbjct: 370 CKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTTG 429
Query: 2006 SCALGAKCRLHH 2017
+C G C H
Sbjct: 430 NCINGDDCMFSH 441
>gi|403299444|ref|XP_003940496.1| PREDICTED: zinc finger CCCH domain-containing protein 4 [Saimiri
boliviensis boliviensis]
Length = 1179
Score = 47.4 bits (111), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YF++G CT +C + H + + C+ ++ G+CA + C H + C + TG
Sbjct: 355 CKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTTG 414
Query: 2006 SCALGAKCRLHH 2017
+C G C H
Sbjct: 415 NCINGDDCMFSH 426
>gi|357493165|ref|XP_003616871.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355518206|gb|AES99829.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 422
Score = 47.4 bits (111), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 43/111 (38%), Gaps = 38/111 (34%)
Query: 1947 PDCSYFLQ-GLC-TNKNCPYRH-VHVNP------------NASTCEGFLK-GYCADGDEC 1990
PDC Y+L+ G+C NC Y H +++P CE FLK G C G C
Sbjct: 51 PDCVYYLRTGMCGYGSNCRYNHPANISPVTQYGEELPERVGQPDCEYFLKTGTCKYGSTC 110
Query: 1991 RKKHSY----------------------VCPTFKATGSCALGAKCRLHHPK 2019
+ H CP + TGSC G C+ HHP+
Sbjct: 111 KYHHPKDRRGAAPVVFNTLGLPMRQEEKSCPYYMRTGSCKFGVACKFHHPQ 161
>gi|345489996|ref|XP_003426278.1| PREDICTED: hypothetical protein LOC100678781 [Nasonia vitripennis]
Length = 1364
Score = 47.4 bits (111), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLC-TNKNCPYRHVHVNP-NASTCEGFLKGYCADGDEC-RKKHSYVCPTFKATG 2005
C Y++QG C +CP+ H + P C+ +L CA D+C H + C F
Sbjct: 270 CVYYMQGKCHRGDDCPFSHNALPPRKMELCKFYLMDCCAKRDKCLYMHHDFPCKFFHTGL 329
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 330 KCQAGENCKFSH 341
Score = 44.7 bits (104), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 1914 HDPSKIAVCTKFLKGLC-SNSDCKLTHKVIPER-MPDCSYFLQGLCTNKN-CPYRHVHVN 1970
H+ A+C +++G C DC +H +P R M C ++L C ++ C Y H H
Sbjct: 262 HNQDPDAICVYYMQGKCHRGDDCPFSHNALPPRKMELCKFYLMDCCAKRDKCLYMH-HDF 320
Query: 1971 PNASTCEGFLKGY-CADGDECRKKH 1994
P C+ F G C G+ C+ H
Sbjct: 321 P----CKFFHTGLKCQAGENCKFSH 341
>gi|329663751|ref|NP_001192818.1| zinc finger CCCH domain-containing protein 4 [Bos taurus]
gi|296477578|tpg|DAA19693.1| TPA: zinc finger CCCH-type containing 4 [Bos taurus]
Length = 1303
Score = 47.4 bits (111), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YF++G CT +C + H + + C+ ++ G+CA + C H + C + TG
Sbjct: 394 CKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTTG 453
Query: 2006 SCALGAKCRLHH 2017
+C G C H
Sbjct: 454 NCINGDDCMFSH 465
>gi|402074044|gb|EJT69596.1| hypothetical protein GGTG_13212 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 930
Score = 47.4 bits (111), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 37/87 (42%), Gaps = 12/87 (13%)
Query: 1920 AVCTKFLKGLCS-NSDCKLTHKVIPERMP--DCSYFLQGLCTNKN-CPYRHVH------- 1968
A CT F +G C+ + C H+V P P C YF G C + N C + H
Sbjct: 12 APCTFFARGRCTRGASCPFVHEVGPAPKPIKPCHYFAAGHCAHGNSCRFAHSRDRVVAAE 71
Query: 1969 -VNPNASTCEGFLKGYCADGDECRKKH 1994
+ P C F G C G+ECR H
Sbjct: 72 ALPPKTEVCRYFAAGRCTKGEECRFAH 98
>gi|395751434|ref|XP_002829502.2| PREDICTED: zinc finger CCCH domain-containing protein 4 [Pongo
abelii]
Length = 1233
Score = 47.4 bits (111), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YF++G CT +C + H + + C+ ++ G+CA + C H + C + TG
Sbjct: 355 CKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTTG 414
Query: 2006 SCALGAKCRLHH 2017
+C G C H
Sbjct: 415 NCINGDDCMFSH 426
>gi|426243994|ref|XP_004015822.1| PREDICTED: zinc finger CCCH domain-containing protein 4 [Ovis aries]
Length = 1092
Score = 47.4 bits (111), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YF++G CT +C + H + + C+ ++ G+CA + C H + C + TG
Sbjct: 307 CKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTTG 366
Query: 2006 SCALGAKCRLHH 2017
+C G C H
Sbjct: 367 NCINGDDCMFSH 378
>gi|401882106|gb|EJT46379.1| essential RNA-binding component of cleavage and polyadenylation
factor, Yth1p [Trichosporon asahii var. asahii CBS 2479]
gi|406700846|gb|EKD04008.1| essential RNA-binding component of cleavage and polyadenylation
factor, Yth1p [Trichosporon asahii var. asahii CBS 8904]
Length = 324
Score = 47.4 bits (111), Expect = 0.10, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 42/106 (39%), Gaps = 33/106 (31%)
Query: 1918 KIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ---------------------- 1954
K VC +L+ LC D C+ TH MP C +F++
Sbjct: 91 KTTVCKHYLRNLCKVGDNCEYTHDWNLRTMPTCVWFVKLGKCELGGECLYYHPKDRRVEC 150
Query: 1955 -----GLCT-NKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
G C CP RHV + C+ +L G+C DG +C++ H
Sbjct: 151 PDYNRGFCRLGPECPRRHVR----RTLCQAYLAGFCPDGPDCKQAH 192
Score = 45.8 bits (107), Expect = 0.31, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 33/92 (35%), Gaps = 24/92 (26%)
Query: 1954 QGLCTNKNCPYRHVHVNP------------------NASTCEGFLKGYCADGDECRKKHS 1995
+G NCP RH P + C+ +L+ C GD C H
Sbjct: 55 EGCIFEHNCPLRHTQPAPINFKPQPPLPTHPREREKKTTVCKHYLRNLCKVGDNCEYTHD 114
Query: 1996 Y------VCPTFKATGSCALGAKCRLHHPKSR 2021
+ C F G C LG +C +HPK R
Sbjct: 115 WNLRTMPTCVWFVKLGKCELGGECLYYHPKDR 146
>gi|354493805|ref|XP_003509030.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 4-like [Cricetulus griseus]
Length = 1126
Score = 47.4 bits (111), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YF++G CT +C + H + + C+ ++ G+CA + C H + C + TG
Sbjct: 354 CKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTTG 413
Query: 2006 SCALGAKCRLHH 2017
+C G C H
Sbjct: 414 NCINGDDCMFSH 425
>gi|225447159|ref|XP_002275775.1| PREDICTED: zinc finger CCCH domain-containing protein 12 [Vitis
vinifera]
gi|297739220|emb|CBI28871.3| unnamed protein product [Vitis vinifera]
Length = 450
Score = 47.4 bits (111), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 51/120 (42%), Gaps = 23/120 (19%)
Query: 1922 CTKFLK-GLCS-NSDCKLTHKV-----------IPERM--PDCSYFLQ-GLC-TNKNCPY 1964
C +L+ GLC S+C+ H +PER+ PDC YFL+ G C C Y
Sbjct: 53 CIYYLRTGLCGYGSNCRFNHPAYSEQGAQYRGELPERVGQPDCGYFLKTGTCKYGSTCKY 112
Query: 1965 RHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNG 2024
H A + G +E K SY + TG C GA C+ HHP+ S G
Sbjct: 113 HHPRDRHGAGPVSLNIVGLPMRQEE--KPCSY----YMRTGLCKFGAACKFHHPQPASAG 166
>gi|224091270|ref|XP_002309215.1| predicted protein [Populus trichocarpa]
gi|222855191|gb|EEE92738.1| predicted protein [Populus trichocarpa]
Length = 928
Score = 47.4 bits (111), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Query: 1919 IAVCTKFLKGLC-SNSDCKLTHKVIP-ERMPDCSYFLQGLCTN-KNCPYRHVHVNPNAST 1975
++ C FLKG C CK +H IP + C +F + C NCPY H +
Sbjct: 485 VSPCRHFLKGRCREGQKCKFSHDAIPLTKSEPCHHFARHKCMKGDNCPYDH---QLSKYP 541
Query: 1976 CEGFL-KGYCADGDECRKKH 1994
C ++ KGYC GD C H
Sbjct: 542 CTNYVSKGYCIRGDSCMFSH 561
>gi|119604356|gb|EAW83950.1| makorin, ring finger protein, 1, isoform CRA_b [Homo sapiens]
Length = 258
Score = 47.4 bits (111), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C NC Y H + +P + C+ F +GYC GD CR +HS
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQRGYCIYGDRCRYEHS 109
Score = 40.8 bits (94), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 8/52 (15%)
Query: 1975 TCEGFLKGYCADGDECRKKH-------SYVCPTFKATGSCALGAKCRLHHPK 2019
TC F+ G C +GD CR H S VC F+ G C G +CR H K
Sbjct: 60 TCRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQ-RGYCIYGDRCRYEHSK 110
>gi|134024349|gb|AAI35563.1| zc3h6 protein [Xenopus (Silurana) tropicalis]
Length = 1005
Score = 47.4 bits (111), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+ C + C + H + C+ +++GYC GD C H+ + C +
Sbjct: 254 CKYFLEKRCIKGDQCKFDHDAEIGKKREICKFYIQGYCTKGDNCLYMHNEFPCKFYHTGA 313
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 314 KCYQGDNCKFSH 325
>gi|350529443|ref|NP_001096202.2| zinc finger CCCH domain-containing protein 6 [Xenopus (Silurana)
tropicalis]
Length = 1023
Score = 47.4 bits (111), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+ C + C + H + C+ +++GYC GD C H+ + C +
Sbjct: 272 CKYFLEKRCIKGDQCKFDHDAEIGKKREICKFYIQGYCTKGDNCLYMHNEFPCKFYHTGA 331
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 332 KCYQGDNCKFSH 343
>gi|393247657|gb|EJD55164.1| hypothetical protein AURDEDRAFT_78116 [Auricularia delicata TFB-10046
SS5]
Length = 308
Score = 47.0 bits (110), Expect = 0.12, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 57/162 (35%), Gaps = 52/162 (32%)
Query: 1881 HTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIH-DPSKI-------------------A 1920
H LRL + + C+ C +CP H DPS +
Sbjct: 39 HKLGLRLDKDDQICRLSLTPAGCPLGPLQCPLRHTDPSPLNFQPPKAPPVHPRERERLAT 98
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTCEGF 1979
VC +L+GLC D C+ H+ RMP+C ++ +
Sbjct: 99 VCKHWLRGLCKKGDACEFLHEYNLRRMPECWWYAK------------------------- 133
Query: 1980 LKGYCADGDEC----RKKHSYVCPTFKATGSCALGAKCRLHH 2017
GYC+ GDEC K+ CP + G C LG C H
Sbjct: 134 -YGYCSAGDECLYAHPKERKIECPDYN-RGFCKLGPICPRKH 173
>gi|159164021|pdb|2D9N|A Chain A, Solution Structure Of Ccch Type Zinc-Finger Domain 2 In
Cleavage And Polyadenylation Specificity Factor
Length = 77
Score = 47.0 bits (110), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 1918 KIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRHV 1967
K VC +L+GLC D C+ H+ +MP+C ++ + G C+NK CP+ H+
Sbjct: 9 KTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHI 60
>gi|148710148|gb|EDL42094.1| mCG2069 [Mus musculus]
Length = 1038
Score = 47.0 bits (110), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS--YVCPTFKAT 2004
C YF++G CT +C + H + + C+ ++ G+CA + C H + C + T
Sbjct: 211 CKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYIHERDFPCKLYHTT 270
Query: 2005 GSCALGAKCRLHH 2017
G+C G C H
Sbjct: 271 GNCINGDDCMFSH 283
>gi|338710212|ref|XP_001917161.2| PREDICTED: zinc finger CCCH domain-containing protein 4 [Equus
caballus]
Length = 1147
Score = 47.0 bits (110), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YF++G CT +C + H + + C+ ++ G+CA + C H + C + TG
Sbjct: 366 CKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTTG 425
Query: 2006 SCALGAKCRLHH 2017
+C G C H
Sbjct: 426 NCINGDDCMFSH 437
>gi|449450892|ref|XP_004143196.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like [Cucumis
sativus]
gi|449515163|ref|XP_004164619.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like [Cucumis
sativus]
Length = 430
Score = 46.6 bits (109), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 76/203 (37%), Gaps = 30/203 (14%)
Query: 1904 NKDNGKC----PYIHDPSKIAVCTKFLKGLCS-NSDCKLTHKV-----------IPERM- 1946
N+D G PY P + G CS S+C+ H V +PER+
Sbjct: 31 NQDGGDAAESSPYPDRPGEPDCLYYMRTGSCSYGSNCRFNHPVYVGQGALYNGELPERIG 90
Query: 1947 -PDCSYFLQ-GLC-TNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKA 2003
PDC YFL+ G C +C Y H A + G ++ CP +
Sbjct: 91 QPDCEYFLKTGTCKYGGSCKYHHPRDRRGAGPVTFNILGLPM------RQEEKSCPYYLR 144
Query: 2004 TGSCALGAKCRLHHPKSRSNGKKSRRSRKPKNTHGRYFGSMLVEDSESQTAMSERPTVQN 2063
TGSC G C+ +HP+ G ++R G G+ + S P VQ
Sbjct: 145 TGSCKFGVSCKFNHPQPSPVGNMLPQARPGALGSG---GTPFMPSSGVPYPAWSMPRVQY 201
Query: 2064 NGNLFVEGKLVDYIGLDVSDKEA 2086
V+G+ Y+ + VS +
Sbjct: 202 MPGPCVQGQ-QSYVPVLVSPSQG 223
>gi|242053355|ref|XP_002455823.1| hypothetical protein SORBIDRAFT_03g025780 [Sorghum bicolor]
gi|241927798|gb|EES00943.1| hypothetical protein SORBIDRAFT_03g025780 [Sorghum bicolor]
Length = 689
Score = 46.6 bits (109), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 7/101 (6%)
Query: 1936 KLTHKVIPERMPDCSYFLQGLCTN-KNCPYRHVHVNPNAST-CEGFLKGYCADGDECRKK 1993
KLT +VI + P C ++ G C NC Y H S C F G C G+ C
Sbjct: 423 KLT-RVIKPKKP-CYFYDHGKCQQGNNCKYSHDFTPSTKSKPCTHFACGSCLKGEGCPYD 480
Query: 1994 HS---YVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSR 2031
H Y C +K G CA G KC+ H + G ++ ++
Sbjct: 481 HELSKYECHNYKNNGMCARGDKCKFSHVMRTTEGTPTQDAK 521
>gi|324503865|gb|ADY41672.1| Zinc finger CCCH domain-containing protein 4 [Ascaris suum]
Length = 826
Score = 46.6 bits (109), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 12/84 (14%)
Query: 1892 KYCQFFTRFGKCNKDNGKCPYIHDPS----KIAVCTKFLKGLCSNS-DCKLTHKVIPERM 1946
+ C+FF R G C +D C Y HD + K +C + +G C C L H P
Sbjct: 228 QICKFF-REGYC-RDGENCSYSHDAADSGRKPELCKFYQQGFCKKGLQCPLLHGEYP--- 282
Query: 1947 PDCSYFLQGLCTNKNCPYRHVHVN 1970
C F +G C+ C + HV +N
Sbjct: 283 --CKAFHKGECSRDPCQFSHVPLN 304
>gi|147819907|emb|CAN76191.1| hypothetical protein VITISV_020358 [Vitis vinifera]
Length = 460
Score = 46.6 bits (109), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 51/120 (42%), Gaps = 23/120 (19%)
Query: 1922 CTKFLK-GLCS-NSDCKLTHKV-----------IPERM--PDCSYFLQ-GLC-TNKNCPY 1964
C +L+ GLC S+C+ H +PER+ PDC YFL+ G C C Y
Sbjct: 32 CIYYLRTGLCGYGSNCRFNHPAYSEQGAQYRGELPERVGQPDCGYFLKTGTCKYGSTCKY 91
Query: 1965 RHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSNG 2024
H A + G +E K SY + TG C GA C+ HHP+ S G
Sbjct: 92 HHPRDRHGAGPVXLNIVGLPMRQEE--KPCSY----YMRTGLCKFGAACKFHHPQPASAG 145
>gi|118400634|ref|XP_001032639.1| 50S ribosomal protein [Tetrahymena thermophila]
gi|89286982|gb|EAR84976.1| 50S ribosomal protein [Tetrahymena thermophila SB210]
Length = 1347
Score = 46.6 bits (109), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 9/57 (15%)
Query: 1970 NPNASTCEGFLKGYCADGDECRKKHSY---------VCPTFKATGSCALGAKCRLHH 2017
N C +L+G C GDEC+ H VC F+ TG C +G +C+ H
Sbjct: 97 NEKTKICRYYLQGNCTKGDECKFLHQKDDGEARPKKVCYNFQNTGFCKMGDRCKFSH 153
>gi|224068913|ref|XP_002302855.1| predicted protein [Populus trichocarpa]
gi|222844581|gb|EEE82128.1| predicted protein [Populus trichocarpa]
Length = 450
Score = 46.6 bits (109), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 53/131 (40%), Gaps = 24/131 (18%)
Query: 1911 PYIHDPSKIAVCTKFLK-GLCS-NSDCKLTHKV-----------IPERM--PDCSYFLQ- 1954
PY P + C +L+ GLC S+C+ H + +PER+ PDC Y+++
Sbjct: 45 PYPDRPG-VPDCGYYLRTGLCGYGSNCRYNHPIYAAQGTQLREELPERIGQPDCGYYIKT 103
Query: 1955 GLC-TNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALGAKC 2013
G C C Y H A G DE CP + T SC G C
Sbjct: 104 GTCKYGSTCKYHHPRDRNGAGPVSFNALGLPMRQDE------KSCPYYMRTRSCKFGVAC 157
Query: 2014 RLHHPKSRSNG 2024
+ HHP+ S G
Sbjct: 158 KFHHPQPASLG 168
>gi|156100035|ref|XP_001615745.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148804619|gb|EDL46018.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 350
Score = 46.6 bits (109), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 1886 RLARKRKYCQFFTRFGKCNKDNGKCPYIHDPS---KIAVCTKFL-KGLCSNSDCKLTHKV 1941
++ +KR+ C++F + GKC N KC Y HD + KI+ KFL KG C +C +H
Sbjct: 69 KVQQKREICKYFFKRGKC-IHNEKCTYSHDVTPIYKISKLCKFLVKGTCEKENCIFSHDY 127
Query: 1942 IPERMPDC-SYFLQGLCTNKNCPYRHVHVN 1970
++ C + + C N C ++H+ ++
Sbjct: 128 ---KLFFCRNNVIYNSCYNPLCKFKHIKID 154
>gi|432090579|gb|ELK23995.1| Zinc finger CCCH domain-containing protein 4 [Myotis davidii]
Length = 1258
Score = 46.2 bits (108), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 11/80 (13%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHSYV--------- 1997
C YF++G CT +C + H + + C+ ++ G+CA + C H++
Sbjct: 373 CKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCAKAENCPYMHAFALICRERDFP 432
Query: 1998 CPTFKATGSCALGAKCRLHH 2017
C + TG+C G C H
Sbjct: 433 CKLYHTTGNCINGDDCMFSH 452
>gi|355680860|gb|AER96663.1| cleavage and polyadenylation specific factor 4, 30kDa [Mustela
putorius furo]
Length = 102
Score = 46.2 bits (108), Expect = 0.20, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIH-DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+FF + C K G CP+ H K VC +L+GLC D C+ H+ +MP+C +
Sbjct: 41 CEFFLK-AACGK-GGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYF 98
Query: 1952 F 1952
+
Sbjct: 99 Y 99
Score = 42.4 bits (98), Expect = 2.7, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSY 1996
C +FL+ C CP+RH+ C+ +L+G C GD+C H Y
Sbjct: 41 CEFFLKAACGKGGMCPFRHIS-GEKTVVCKHWLRGLCKKGDQCEFLHEY 88
>gi|410218040|gb|JAA06239.1| makorin ring finger protein 1 [Pan troglodytes]
gi|410264696|gb|JAA20314.1| makorin ring finger protein 1 [Pan troglodytes]
gi|410304626|gb|JAA30913.1| makorin ring finger protein 1 [Pan troglodytes]
Length = 482
Score = 46.2 bits (108), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCTN-KNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C NC Y H + +P + C+ F +GYC GD CR +HS
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQRGYCIYGDRCRYEHS 109
Score = 40.8 bits (94), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 8/52 (15%)
Query: 1975 TCEGFLKGYCADGDECRKKH-------SYVCPTFKATGSCALGAKCRLHHPK 2019
TC F+ G C +GD CR H S VC F+ G C G +CR H K
Sbjct: 60 TCRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQ-RGYCIYGDRCRYEHSK 110
>gi|402595017|gb|EJW88943.1| hypothetical protein WUBG_00143 [Wuchereria bancrofti]
Length = 817
Score = 46.2 bits (108), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 12/84 (14%)
Query: 1892 KYCQFFTRFGKCNKDNGKCPYIHDPS----KIAVCTKFLKGLCSNS-DCKLTHKVIPERM 1946
+ C+FF R G C +D C Y HD + K +C + +G C C L H P
Sbjct: 230 QICKFF-REGYC-RDGDSCSYSHDAADSGRKAELCKFYQQGFCKKGLQCPLLHGEYP--- 284
Query: 1947 PDCSYFLQGLCTNKNCPYRHVHVN 1970
C F +G C+ C + H+ +N
Sbjct: 285 --CKAFHKGECSKDPCQFSHLPLN 306
>gi|57157094|dbj|BAD83579.1| RFP [Mus musculus]
Length = 486
Score = 46.2 bits (108), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCTN-KNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C NC Y H + +P C+ F +GYC GD CR +HS
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCVYGDRCRYEHS 109
>gi|148229622|ref|NP_061280.2| E3 ubiquitin-protein ligase makorin-1 [Mus musculus]
gi|26345866|dbj|BAC36584.1| unnamed protein product [Mus musculus]
Length = 481
Score = 46.2 bits (108), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCTN-KNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C NC Y H + +P C+ F +GYC GD CR +HS
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCVYGDRCRYEHS 109
>gi|402865000|ref|XP_003896727.1| PREDICTED: E3 ubiquitin-protein ligase makorin-1 [Papio anubis]
Length = 486
Score = 46.2 bits (108), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCTN-KNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C NC Y H + +P + C+ F +GYC GD CR +HS
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQRGYCIYGDRCRYEHS 109
Score = 40.8 bits (94), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 8/52 (15%)
Query: 1975 TCEGFLKGYCADGDECRKKH-------SYVCPTFKATGSCALGAKCRLHHPK 2019
TC F+ G C +GD CR H S VC F+ G C G +CR H K
Sbjct: 60 TCRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQ-RGYCIYGDRCRYEHSK 110
>gi|380787373|gb|AFE65562.1| E3 ubiquitin-protein ligase makorin-1 isoform 1 [Macaca mulatta]
gi|384939788|gb|AFI33499.1| E3 ubiquitin-protein ligase makorin-1 isoform 1 [Macaca mulatta]
Length = 482
Score = 46.2 bits (108), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCTN-KNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C NC Y H + +P + C+ F +GYC GD CR +HS
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQRGYCIYGDRCRYEHS 109
Score = 40.8 bits (94), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 8/52 (15%)
Query: 1975 TCEGFLKGYCADGDECRKKH-------SYVCPTFKATGSCALGAKCRLHHPK 2019
TC F+ G C +GD CR H S VC F+ G C G +CR H K
Sbjct: 60 TCRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQ-RGYCIYGDRCRYEHSK 110
>gi|17369431|sp|Q9QXP6.1|MKRN1_MOUSE RecName: Full=E3 ubiquitin-protein ligase makorin-1
gi|6572966|gb|AAF17488.1|AF192785_1 makorin 1 [Mus musculus]
Length = 481
Score = 46.2 bits (108), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCTN-KNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C NC Y H + +P C+ F +GYC GD CR +HS
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCVYGDRCRYEHS 109
>gi|213404030|ref|XP_002172787.1| cps3 [Schizosaccharomyces japonicus yFS275]
gi|212000834|gb|EEB06494.1| cps3 [Schizosaccharomyces japonicus yFS275]
Length = 499
Score = 46.2 bits (108), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 1949 CSYFLQGLCTN-KNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHSY 1996
C +F QG CT+ KNC + H + N + C+ FLKG C G +C H Y
Sbjct: 41 CKFFRQGTCTSGKNCVFSHDLEPNSEKTVCKYFLKGNCKFGSKCALDHVY 90
>gi|148681661|gb|EDL13608.1| makorin, ring finger protein, 1, isoform CRA_d [Mus musculus]
Length = 481
Score = 46.2 bits (108), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCTN-KNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C NC Y H + +P C+ F +GYC GD CR +HS
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCVYGDRCRYEHS 109
>gi|383412891|gb|AFH29659.1| E3 ubiquitin-protein ligase makorin-1 isoform 1 [Macaca mulatta]
Length = 482
Score = 46.2 bits (108), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCTN-KNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C NC Y H + +P + C+ F +GYC GD CR +HS
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQRGYCIYGDRCRYEHS 109
Score = 40.8 bits (94), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 8/52 (15%)
Query: 1975 TCEGFLKGYCADGDECRKKH-------SYVCPTFKATGSCALGAKCRLHHPK 2019
TC F+ G C +GD CR H S VC F+ G C G +CR H K
Sbjct: 60 TCRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQ-RGYCIYGDRCRYEHSK 110
>gi|118099802|ref|XP_001234822.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Gallus gallus]
Length = 193
Score = 46.2 bits (108), Expect = 0.23, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 1957 CTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSY--VCPTFKATGSCALGAKCR 2014
C++++CP HV + C + +G+C G CR +H+ +C + A G C G KC+
Sbjct: 34 CSSEDCPCPHVDATAGTAGCPWYDQGFCRHGPLCRYEHTRRAMCVNYLA-GFCPDGPKCK 92
Query: 2015 LHHPKSR 2021
H K+R
Sbjct: 93 FMHLKAR 99
>gi|114616323|ref|XP_519424.2| PREDICTED: E3 ubiquitin-protein ligase makorin-1 isoform 5 [Pan
troglodytes]
gi|410218038|gb|JAA06238.1| makorin ring finger protein 1 [Pan troglodytes]
gi|410264694|gb|JAA20313.1| makorin ring finger protein 1 [Pan troglodytes]
gi|410304624|gb|JAA30912.1| makorin ring finger protein 1 [Pan troglodytes]
gi|410329651|gb|JAA33772.1| makorin ring finger protein 1 [Pan troglodytes]
Length = 482
Score = 46.2 bits (108), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCTN-KNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C NC Y H + +P + C+ F +GYC GD CR +HS
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQRGYCIYGDRCRYEHS 109
Score = 40.8 bits (94), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 8/52 (15%)
Query: 1975 TCEGFLKGYCADGDECRKKH-------SYVCPTFKATGSCALGAKCRLHHPK 2019
TC F+ G C +GD CR H S VC F+ G C G +CR H K
Sbjct: 60 TCRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQ-RGYCIYGDRCRYEHSK 110
>gi|149065309|gb|EDM15385.1| rCG28025, isoform CRA_a [Rattus norvegicus]
Length = 481
Score = 46.2 bits (108), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCTN-KNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C NC Y H + +P C+ F +GYC GD CR +HS
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCVYGDRCRYEHS 109
>gi|223468620|ref|NP_038474.2| E3 ubiquitin-protein ligase makorin-1 isoform 1 [Homo sapiens]
gi|67477468|sp|Q9UHC7.3|MKRN1_HUMAN RecName: Full=E3 ubiquitin-protein ligase makorin-1; AltName:
Full=RING finger protein 61
gi|12053135|emb|CAB66746.1| hypothetical protein [Homo sapiens]
gi|23273984|gb|AAH37400.1| Makorin ring finger protein 1 [Homo sapiens]
gi|40787667|gb|AAH64838.1| Makorin ring finger protein 1 [Homo sapiens]
gi|51094780|gb|EAL24026.1| makorin, ring finger protein, 1 [Homo sapiens]
gi|119604355|gb|EAW83949.1| makorin, ring finger protein, 1, isoform CRA_a [Homo sapiens]
gi|123983178|gb|ABM83330.1| makorin, ring finger protein, 1 [synthetic construct]
gi|157928042|gb|ABW03317.1| makorin, ring finger protein, 1 [synthetic construct]
gi|189054945|dbj|BAG37929.1| unnamed protein product [Homo sapiens]
Length = 482
Score = 46.2 bits (108), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCTN-KNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C NC Y H + +P + C+ F +GYC GD CR +HS
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQRGYCIYGDRCRYEHS 109
Score = 40.8 bits (94), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 8/52 (15%)
Query: 1975 TCEGFLKGYCADGDECRKKH-------SYVCPTFKATGSCALGAKCRLHHPK 2019
TC F+ G C +GD CR H S VC F+ G C G +CR H K
Sbjct: 60 TCRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQ-RGYCIYGDRCRYEHSK 110
>gi|410218042|gb|JAA06240.1| makorin ring finger protein 1 [Pan troglodytes]
Length = 482
Score = 46.2 bits (108), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCTN-KNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C NC Y H + +P + C+ F +GYC GD CR +HS
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQRGYCIYGDRCRYEHS 109
Score = 40.8 bits (94), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 8/52 (15%)
Query: 1975 TCEGFLKGYCADGDECRKKH-------SYVCPTFKATGSCALGAKCRLHHPK 2019
TC F+ G C +GD CR H S VC F+ G C G +CR H K
Sbjct: 60 TCRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQ-RGYCIYGDRCRYEHSK 110
>gi|6601434|gb|AAF18979.1| makorin 1 [Homo sapiens]
gi|19684160|gb|AAH25955.1| Makorin ring finger protein 1 [Homo sapiens]
gi|261858840|dbj|BAI45942.1| Makorin-1 (RING finger protein 61) [synthetic construct]
Length = 482
Score = 46.2 bits (108), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCTN-KNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C NC Y H + +P + C+ F +GYC GD CR +HS
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQRGYCIYGDRCRYEHS 109
Score = 40.8 bits (94), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 8/52 (15%)
Query: 1975 TCEGFLKGYCADGDECRKKH-------SYVCPTFKATGSCALGAKCRLHHPK 2019
TC F+ G C +GD CR H S VC F+ G C G +CR H K
Sbjct: 60 TCRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQ-RGYCIYGDRCRYEHSK 110
>gi|6572964|gb|AAF17487.1|AF192784_1 makorin 1 [Homo sapiens]
Length = 482
Score = 46.2 bits (108), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCTN-KNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C NC Y H + +P + C+ F +GYC GD CR +HS
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQRGYCIYGDRCRYEHS 109
Score = 40.8 bits (94), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 8/52 (15%)
Query: 1975 TCEGFLKGYCADGDECRKKH-------SYVCPTFKATGSCALGAKCRLHHPK 2019
TC F+ G C +GD CR H S VC F+ G C G +CR H K
Sbjct: 60 TCRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQ-RGYCIYGDRCRYEHSK 110
>gi|389585211|dbj|GAB67942.1| zinc finger protein [Plasmodium cynomolgi strain B]
Length = 348
Score = 45.8 bits (107), Expect = 0.24, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 1889 RKRKYCQFFTRFGKCNKDNGKCPYIHDPSKI----AVCTKFLKGLCSNSDCKLTHKVIPE 1944
+KR+ C+FF + GKC N KC Y HD + I +C +KG C +C +H
Sbjct: 70 QKREICKFFFKKGKC-MHNEKCTYSHDVTPIYKISKLCKFLVKGTCKKENCIFSHDY--- 125
Query: 1945 RMPDC-SYFLQGLCTNKNCPYRHVHVNPNASTCEGF 1979
++ C + + C N C ++H+ ++ + + + +
Sbjct: 126 KLFFCRNNVIYNSCCNPQCKFKHIKIDSSINNADQY 161
>gi|355702623|gb|AES01993.1| makorin ring finger protein 1 [Mustela putorius furo]
Length = 483
Score = 45.8 bits (107), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCTN-KNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C NC Y H + +P C+ F +GYC GD CR +HS
Sbjct: 63 CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCIYGDRCRYEHS 111
>gi|311275274|ref|XP_003134656.1| PREDICTED: E3 ubiquitin-protein ligase makorin-1 isoform 1 [Sus
scrofa]
Length = 482
Score = 45.8 bits (107), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCTN-KNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C NC Y H + +P C+ F +GYC GD CR +HS
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCIYGDRCRYEHS 109
>gi|384495837|gb|EIE86328.1| hypothetical protein RO3G_11039 [Rhizopus delemar RA 99-880]
Length = 243
Score = 45.8 bits (107), Expect = 0.27, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 8/75 (10%)
Query: 1949 CSYFLQGLCTN-KNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS-----YVCPTFK 2002
C Y+ QG C + + C ++H +N + C ++KG C + D CR KH +C +K
Sbjct: 42 CKYYAQGYCKDAEKCTFKHESIN-DPEVCPLWIKGKCKNDDLCRFKHEGPRDIKICQFYK 100
Query: 2003 ATGSCALGAKCRLHH 2017
A SC G +C H
Sbjct: 101 AQ-SCTKGDQCPFSH 114
Score = 45.4 bits (106), Expect = 0.38, Method: Composition-based stats.
Identities = 40/155 (25%), Positives = 63/155 (40%), Gaps = 24/155 (15%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDP-SKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSY 1951
C+++ + G C KD KC + H+ + VC ++KG C N D C+ H+ P + C +
Sbjct: 42 CKYYAQ-GYC-KDAEKCTFKHESINDPEVCPLWIKGKCKNDDLCRFKHEG-PRDIKICQF 98
Query: 1952 FLQGLCTNKN-CPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSYVCPT--------- 2000
+ CT + CP+ H N C F L+ C G+ C H + P
Sbjct: 99 YKAQSCTKGDQCPFSH---ELNLEPCRFFHLQKTCEQGELCPYSHDPLTPESLERLRKLT 155
Query: 2001 -----FKATGSCALGAKCRLHHPKSRSNGKKSRRS 2030
++ G C G C H + +K S
Sbjct: 156 GPCRFWQFKGYCVTGDACLFAHDEISEEERKKLES 190
Score = 42.7 bits (99), Expect = 2.2, Method: Composition-based stats.
Identities = 38/144 (26%), Positives = 54/144 (37%), Gaps = 31/144 (21%)
Query: 1901 GKCNKDNGKCPYIHD-PSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYF-LQGLC 1957
GKC D+ C + H+ P I +C + C+ D C +H++ + C +F LQ C
Sbjct: 75 GKCKNDD-LCRFKHEGPRDIKICQFYKAQSCTKGDQCPFSHEL---NLEPCRFFHLQKTC 130
Query: 1958 TNKN-CPYRHVHVNPNA--------STCEGF-LKGYCADGDECRKKHSYV---------- 1997
CPY H + P + C + KGYC GD C H +
Sbjct: 131 EQGELCPYSHDPLTPESLERLRKLTGPCRFWQFKGYCVTGDACLFAHDEISEEERKKLES 190
Query: 1998 ----CPTFKATGSCALGAKCRLHH 2017
C + G C G C H
Sbjct: 191 TITPCIYYHLKGGCRSGDDCFYLH 214
>gi|193506556|pdb|2RHK|C Chain C, Crystal Structure Of Influenza A Ns1a Protein In Complex
With F2f3 Fragment Of Human Cellular Factor Cpsf30,
Northeast Structural Genomics Targets Or8c And Hr6309a
gi|193506557|pdb|2RHK|D Chain D, Crystal Structure Of Influenza A Ns1a Protein In Complex
With F2f3 Fragment Of Human Cellular Factor Cpsf30,
Northeast Structural Genomics Targets Or8c And Hr6309a
Length = 72
Score = 45.8 bits (107), Expect = 0.27, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Query: 1918 KIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRHVHVNPNA 1973
K VC +L+GLC D C+ H+ +M +C ++ + G C+NK CP+ +H++P +
Sbjct: 15 KTVVCKHWLRGLCKKGDQCEFLHEYDMTKMSECYFYSKFGECSNKECPF--LHIDPES 70
>gi|327272304|ref|XP_003220925.1| PREDICTED: poly [ADP-ribose] polymerase 12-like [Anolis carolinensis]
Length = 663
Score = 45.8 bits (107), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 1888 ARKRKYCQFFTRFGKCNKDNGK--CPYIHD---PSKIAVCTKF-LKGLCSNSDCKLTHKV 1941
R+ C+FF +G C + C +IHD P +AV + L+ L S+ C+L +
Sbjct: 90 CRQLHLCRFFV-YGACRHQGTRKQCRFIHDFYSPCNLAVLKEHELEKLSSDDLCQLLLQN 148
Query: 1942 IPERMPD-CSYFLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCP 1999
P +P+ C+Y+ +G +C ++ + V + C+ +L G C G C++ H P
Sbjct: 149 DPSLLPEVCAYYNKGDGPYGSCNFKKICVKLH--ICQYYLHGDCRFGSNCKRSHDVFNP 205
>gi|62088176|dbj|BAD92535.1| makorin, ring finger protein, 1 variant [Homo sapiens]
Length = 409
Score = 45.8 bits (107), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCTN-KNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C NC Y H + +P + C+ F +GYC GD CR +HS
Sbjct: 58 CRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQRGYCIYGDRCRYEHS 106
>gi|410953065|ref|XP_003983196.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
makorin-1, partial [Felis catus]
Length = 462
Score = 45.8 bits (107), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCTN-KNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C NC Y H + +P C+ F +GYC GD CR +HS
Sbjct: 41 CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCIYGDRCRYEHS 89
>gi|403263831|ref|XP_003924212.1| PREDICTED: E3 ubiquitin-protein ligase makorin-1-like [Saimiri
boliviensis boliviensis]
Length = 468
Score = 45.8 bits (107), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLC-TNKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C NC Y H + +P+ C+ F +GYC GD CR +HS
Sbjct: 50 CRYFMHGVCKEGDNCGYSHDLSDSPHGVVCKYFHQGYCIYGDGCRYEHS 98
>gi|332243383|ref|XP_003270859.1| PREDICTED: E3 ubiquitin-protein ligase makorin-1 [Nomascus
leucogenys]
Length = 482
Score = 45.8 bits (107), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCTN-KNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C NC Y H + +P + C+ F +GYC GD CR +HS
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPCSVVCKYFQRGYCIYGDRCRYEHS 109
>gi|157279867|ref|NP_001098449.1| E3 ubiquitin-protein ligase makorin-1 [Bos taurus]
gi|124829161|gb|AAI33457.1| MKRN1 protein [Bos taurus]
Length = 340
Score = 45.8 bits (107), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C NC Y H + +P C+ F +GYC GD CR +HS
Sbjct: 73 CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCIYGDRCRYEHS 121
>gi|344297146|ref|XP_003420260.1| PREDICTED: E3 ubiquitin-protein ligase makorin-1 [Loxodonta africana]
Length = 482
Score = 45.8 bits (107), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C NC Y H + +P C+ F +GYC GD CR +HS
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCIYGDRCRYEHS 109
>gi|397575886|gb|EJK49944.1| hypothetical protein THAOC_31122 [Thalassiosira oceanica]
Length = 627
Score = 45.8 bits (107), Expect = 0.30, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 1914 HDPS-KIAVCTKFLKGLC-SNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNP 1971
+DP + VC +L+ LC + C+ H+ +MP C + + C ++CP+RH++
Sbjct: 63 YDPRLRTVVCRHWLRDLCMKGAACEFLHQYDLSKMPLCRHGER--CKVRDCPFRHIN-EA 119
Query: 1972 NASTCEGFLKGYCADGDECRKKH 1994
+ C + +G+C G CR +H
Sbjct: 120 DRLECVFYSQGFCIHGPFCRYRH 142
>gi|55793575|gb|AAV65768.1| makorin 1 [Mus spretus]
Length = 365
Score = 45.8 bits (107), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCTN-KNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C NC Y H + +P C+ F +GYC GD CR +HS
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCVYGDRCRYEHS 109
>gi|348689026|gb|EGZ28840.1| hypothetical protein PHYSODRAFT_477411 [Phytophthora sojae]
Length = 297
Score = 45.4 bits (106), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 14/110 (12%)
Query: 1831 LEKNAKKSYIPRRLVIGNDEYVRIGNGNQLIRDPKRRARVLASEKVRWSLHTARLRLARK 1890
L N KS + L + + EY + G+ L+R ++ V+ W + A +
Sbjct: 177 LGANKTKSMQLQMLRLEDGEYSKANGGSSLVRAGVKKPTVV------WMVVVADI----- 225
Query: 1891 RKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHK 1940
C K+ C +IHD ++A+C KFLK CS+ C L+H+
Sbjct: 226 ---CVIVCGTAGYCKNKDACRFIHDSRRVAMCRKFLKNECSDPKCLLSHQ 272
>gi|6563240|gb|AAF17214.1|AF117233_1 znf-xp protein [Homo sapiens]
Length = 328
Score = 45.4 bits (106), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C NC Y H + +P + C+ F +GYC GD CR +HS
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQRGYCIYGDRCRYEHS 109
>gi|55793567|gb|AAV65767.1| makorin 1 [Mus caroli]
Length = 365
Score = 45.4 bits (106), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCTN-KNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C NC Y H + +P C+ F +GYC GD CR +HS
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCVYGDRCRYEHS 109
>gi|426358173|ref|XP_004046395.1| PREDICTED: E3 ubiquitin-protein ligase makorin-1 [Gorilla gorilla
gorilla]
Length = 506
Score = 45.4 bits (106), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCTNK-NCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C ++ NC Y H + +P C+ F +GYC GD C+ +HS
Sbjct: 85 CRYFMHGVCKDRGNCGYSHDLSDSPYGVVCKYFQQGYCVYGDCCKYEHS 133
>gi|380811254|gb|AFE77502.1| E3 ubiquitin-protein ligase makorin-1 isoform 2 [Macaca mulatta]
Length = 329
Score = 45.4 bits (106), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C NC Y H + +P + C+ F +GYC GD CR +HS
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQRGYCIYGDRCRYEHS 109
>gi|383417145|gb|AFH31786.1| E3 ubiquitin-protein ligase makorin-1 isoform 2 [Macaca mulatta]
Length = 329
Score = 45.4 bits (106), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C NC Y H + +P + C+ F +GYC GD CR +HS
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQRGYCIYGDRCRYEHS 109
>gi|300121444|emb|CBK21963.2| unnamed protein product [Blastocystis hominis]
Length = 291
Score = 45.4 bits (106), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
Query: 1922 CTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRHVHVNPNASTCEGF- 1979
C F +G C DC+ H P P C L+ G+CT NC Y H +P C F
Sbjct: 120 CKFFKRGRCHRKDCEFLHDGPP---PLCYNILKNGVCTEPNCIYSH---DPKKVGCMFFH 173
Query: 1980 LKGYCADGDECRKKHSYVCP 1999
+ C GD+C+ H + P
Sbjct: 174 ITHNCTRGDKCKFSHEAISP 193
>gi|223468622|ref|NP_001138597.1| E3 ubiquitin-protein ligase makorin-1 isoform 2 [Homo sapiens]
gi|89885440|emb|CAJ84705.1| makorin-1 [Homo sapiens]
Length = 329
Score = 45.4 bits (106), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C NC Y H + +P + C+ F +GYC GD CR +HS
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQRGYCIYGDRCRYEHS 109
>gi|393906226|gb|EJD74222.1| hypothetical protein LOAG_18433 [Loa loa]
Length = 836
Score = 45.4 bits (106), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 12/84 (14%)
Query: 1892 KYCQFFTRFGKCNKDNGKCPYIHDPS----KIAVCTKFLKGLCSNS-DCKLTHKVIPERM 1946
+ C+FF R G C +D C Y HD + K +C + +G C C L H P
Sbjct: 246 QICKFF-REGYC-RDGESCSYSHDAADSGRKAELCKFYQQGFCKKGLQCPLLHGEYP--- 300
Query: 1947 PDCSYFLQGLCTNKNCPYRHVHVN 1970
C F +G C+ C + H+ +N
Sbjct: 301 --CKAFHKGECSKDPCQFSHLPLN 322
>gi|296488183|tpg|DAA30296.1| TPA: makorin ring finger protein 1 [Bos taurus]
Length = 334
Score = 45.4 bits (106), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C NC Y H + +P C+ F +GYC GD CR +HS
Sbjct: 73 CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCIYGDRCRYEHS 121
>gi|51948434|ref|NP_001004233.1| E3 ubiquitin-protein ligase makorin-1 [Rattus norvegicus]
gi|51260828|gb|AAH79407.1| Makorin ring finger protein 1 [Rattus norvegicus]
gi|149065311|gb|EDM15387.1| rCG28025, isoform CRA_c [Rattus norvegicus]
Length = 329
Score = 45.4 bits (106), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C NC Y H + +P C+ F +GYC GD CR +HS
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCVYGDRCRYEHS 109
>gi|37665522|dbj|BAC99018.1| Makorin1 [Seriola quinqueradiata]
Length = 418
Score = 45.4 bits (106), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 1949 CSYFLQGLCTN-KNCPYRHVHVN--PNASTCEGFLKGYCADGDECRKKH 1994
C YF+ GLC NC Y H N P A C+ F KG C GD CR +H
Sbjct: 7 CRYFMHGLCKEGDNCRYSHDLTNSKPAAMICKFFQKGNCVFGDRCRFEH 55
Score = 42.0 bits (97), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 9/57 (15%)
Query: 1975 TCEGFLKGYCADGDECRKKH--------SYVCPTFKATGSCALGAKCRLHHPKSRSN 2023
TC F+ G C +GD CR H + +C F+ G+C G +CR H K N
Sbjct: 6 TCRYFMHGLCKEGDNCRYSHDLTNSKPAAMICKFFQ-KGNCVFGDRCRFEHCKPAKN 61
>gi|213407162|ref|XP_002174352.1| zinc finger protein LEE1 [Schizosaccharomyces japonicus yFS275]
gi|212002399|gb|EEB08059.1| zinc finger protein LEE1 [Schizosaccharomyces japonicus yFS275]
Length = 518
Score = 45.4 bits (106), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C +F QG CT NCP+ H N S C+ FLKG C G +C HS
Sbjct: 57 CKFFRQGACTAGNNCPFSHSLDN-ERSPCKYFLKGNCKFGSKCALSHS 103
>gi|13097105|gb|AAH03329.1| Mkrn1 protein [Mus musculus]
gi|148681659|gb|EDL13606.1| makorin, ring finger protein, 1, isoform CRA_b [Mus musculus]
Length = 329
Score = 45.4 bits (106), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C NC Y H + +P C+ F +GYC GD CR +HS
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCVYGDRCRYEHS 109
>gi|335305220|ref|XP_003360159.1| PREDICTED: E3 ubiquitin-protein ligase makorin-1 isoform 2 [Sus
scrofa]
Length = 329
Score = 45.4 bits (106), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C NC Y H + +P C+ F +GYC GD CR +HS
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCIYGDRCRYEHS 109
>gi|170588533|ref|XP_001899028.1| Zinc finger CCCH type domain containing protein 6. [Brugia malayi]
gi|158593241|gb|EDP31836.1| Zinc finger CCCH type domain containing protein 6., putative [Brugia
malayi]
Length = 755
Score = 45.4 bits (106), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 16/99 (16%)
Query: 1892 KYCQFFTRFGKCNKDNGKCPYIHDPS----KIAVCTKFLKGLCSNS-DCKLTHKVIPERM 1946
+ C+FF R G C +D C Y HD + K +C + +G C C L H P
Sbjct: 157 QICKFF-REGYC-RDGDSCSYSHDAADSGRKAELCKFYQQGFCKKGLQCPLLHGEYP--- 211
Query: 1947 PDCSYFLQGLCTNKNCPYRHVHVN----PNASTCEGFLK 1981
C F +G C+ C + H+ +N P FLK
Sbjct: 212 --CKAFHKGECSKDPCQFSHLPLNNFTQPIFDQVGAFLK 248
>gi|255563196|ref|XP_002522601.1| conserved hypothetical protein [Ricinus communis]
gi|223538077|gb|EEF39688.1| conserved hypothetical protein [Ricinus communis]
Length = 932
Score = 45.4 bits (106), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 41/109 (37%), Gaps = 30/109 (27%)
Query: 1913 IHDPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNP 1971
+ P + C +++G C + CK +H IP L +K C +
Sbjct: 483 VEKPKPVVFCRHYIRGRCQEGEKCKFSHDTIP------------LTKSKPCCH------- 523
Query: 1972 NASTCEGFLKGYCADGDECRKKHS---YVCPTFKATGSCALGAKCRLHH 2017
F + C GD+C H Y C + +TGSC+ G C H
Sbjct: 524 -------FARNSCLKGDDCPFDHELSKYPCTNYASTGSCSRGDDCMFSH 565
>gi|300122914|emb|CBK23921.2| unnamed protein product [Blastocystis hominis]
Length = 291
Score = 45.4 bits (106), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
Query: 1922 CTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRHVHVNPNASTCEGF- 1979
C F +G C DC+ H P P C L+ G+CT NC Y H +P C F
Sbjct: 120 CKFFKRGRCHRKDCEFLHDGPP---PLCYNILKNGVCTEPNCIYSH---DPKKVGCMFFH 173
Query: 1980 LKGYCADGDECRKKHSYVCP 1999
+ C GD+C+ H + P
Sbjct: 174 ITHNCTRGDKCKFSHEAISP 193
>gi|348536391|ref|XP_003455680.1| PREDICTED: probable E3 ubiquitin-protein ligase makorin-1-like
[Oreochromis niloticus]
Length = 431
Score = 45.1 bits (105), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 1949 CSYFLQGLCTN-KNCPYRH--VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ GLC +NC Y H P + C+ F KG CA GD CR +HS
Sbjct: 24 CRYFMHGLCKEGENCRYSHDLTSSKPASMICKFFQKGNCAFGDRCRFEHS 73
Score = 42.4 bits (98), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 9/57 (15%)
Query: 1975 TCEGFLKGYCADGDECRKKH--------SYVCPTFKATGSCALGAKCRLHHPKSRSN 2023
TC F+ G C +G+ CR H S +C F+ G+CA G +CR H K N
Sbjct: 23 TCRYFMHGLCKEGENCRYSHDLTSSKPASMICKFFQK-GNCAFGDRCRFEHSKPVKN 78
>gi|389585769|dbj|GAB68499.1| YT521-B-like family protein [Plasmodium cynomolgi strain B]
Length = 565
Score = 45.1 bits (105), Expect = 0.43, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 26/107 (24%)
Query: 1921 VCTKFLKGLC-SNSDCKLTHKVIPERMPDCSYFLQG-LCTNK---NCPYRHV--HVNPNA 1973
+C ++K +C N C H++I ++P C FL+ C +K +C +RH ++NP
Sbjct: 104 ICIHYIKNMCMKNLFCNYLHQLIYAKIPACKNFLKNNYCADKVRGSCMFRHTQENINPGG 163
Query: 1974 ST-------------------CEGFLKGYCADGDECRKKHSYVCPTF 2001
S C +L G+C G C+K H Y F
Sbjct: 164 SAESRDDYLDDVLKFLYEKNICVNYLLGFCNLGYNCKKVHKYKSRKF 210
>gi|149065312|gb|EDM15388.1| rCG28025, isoform CRA_d [Rattus norvegicus]
Length = 196
Score = 45.1 bits (105), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C NC Y H + +P C+ F +GYC GD CR +HS
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCVYGDRCRYEHS 109
>gi|26347663|dbj|BAC37480.1| unnamed protein product [Mus musculus]
Length = 196
Score = 45.1 bits (105), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C NC Y H + +P C+ F +GYC GD CR +HS
Sbjct: 61 CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCVYGDRCRYEHS 109
>gi|408690392|gb|AFU81656.1| C3H-type transcription factor, partial [Zea mays subsp. mays]
Length = 691
Score = 45.1 bits (105), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Query: 1936 KLTHKVIPERMPDCSYFLQGLC-TNKNCPYRHVHVNPNAST-CEGFLKGYCADGDECRKK 1993
KLT P++ C ++ G C NC + H S C F G C G+EC
Sbjct: 425 KLTPVTKPKK--PCHFYDHGKCRQGNNCKFSHDFTPSTKSKPCTHFACGSCLXGEECPYD 482
Query: 1994 HS---YVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSR 2031
H Y C +K G+CA G C+ H + G ++ ++
Sbjct: 483 HELSKYECHNYKNNGTCARGDNCKFSHVMPTTEGTPTQDAK 523
>gi|358335246|dbj|GAA31229.2| zinc finger CCCH domain-containing protein 6 [Clonorchis sinensis]
Length = 622
Score = 45.1 bits (105), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 53/127 (41%), Gaps = 25/127 (19%)
Query: 1881 HTARLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSD-CKLTH 1939
H LR +RKR+ + FT+ P A C F++G C+ D C H
Sbjct: 49 HDFDLRRSRKRRKMERFTK----------------PPMQAKCRYFMEGRCNKGDSCPFAH 92
Query: 1940 KVIPERMPD-CSYFLQGLCT-NKNCPYRHVHVNPNASTCEGF-LKGYCADGDECRKKHSY 1996
P + + C ++ G+C+ C Y H V C+ + G C+ GD C+ H
Sbjct: 93 DFQPTKKQELCKFYAVGVCSKGPTCLYLHEEV-----PCKFYHFFGKCSHGDSCKFSHEP 147
Query: 1997 VCPTFKA 2003
+ P +A
Sbjct: 148 LTPESQA 154
>gi|395514832|ref|XP_003761616.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 4
isoform 3 [Sarcophilus harrisii]
Length = 211
Score = 45.1 bits (105), Expect = 0.48, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 1915 DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQGLCTNKN-CPYRHVHVNPN 1972
D S AVC FLK C C H + E+ C ++L+GLC + C + H +
Sbjct: 34 DKSGAAVCEFFLKAACGKGGMCPFRH-ISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTK 92
Query: 1973 ASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCALGAKCRLHHPK 2019
C + K G CR +H+ +C + G C G C+ HP+
Sbjct: 93 MPECYFYSKF----GPLCRHRHTRRVICVNY-LVGFCPEGPSCKFMHPR 136
>gi|414881499|tpg|DAA58630.1| TPA: putative RING zinc finger domain superfamily protein isoform 1
[Zea mays]
gi|414881500|tpg|DAA58631.1| TPA: putative RING zinc finger domain superfamily protein isoform 2
[Zea mays]
Length = 691
Score = 45.1 bits (105), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Query: 1936 KLTHKVIPERMPDCSYFLQGLC-TNKNCPYRHVHVNPNAST-CEGFLKGYCADGDECRKK 1993
KLT P++ C ++ G C NC + H S C F G C G+EC
Sbjct: 425 KLTPVTKPKK--PCHFYDHGKCRQGNNCKFSHDFTPSTKSKPCTHFACGSCLKGEECPYD 482
Query: 1994 HS---YVCPTFKATGSCALGAKCRLHHPKSRSNGKKSRRSR 2031
H Y C +K G+CA G C+ H + G ++ ++
Sbjct: 483 HELSKYECHNYKNNGTCARGDNCKFSHVMPTTEGTPTQDAK 523
>gi|326473246|gb|EGD97255.1| mRNA cleavage and polyadenylation specificity factor complex subunit
[Trichophyton tonsurans CBS 112818]
Length = 244
Score = 45.1 bits (105), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 1928 GLCSNS-DCKLTHKVIPERMPDCSYFLQ-GLCTN-KNCPYRHVHVNPNASTCEGFLKGYC 1984
GLC C+ H+ RMP+C F + G C N +C Y+H+ + CE + +G+C
Sbjct: 88 GLCKKGLKCEYLHEYNLRRMPECQSFSRNGFCPNGDDCLYQHLSGDAKLPQCEHYDQGFC 147
Query: 1985 ADGDECRKKH--SYVCPTFKATGSCALGAKC 2013
G C K+H +C F G C G C
Sbjct: 148 PLGPICAKRHVRRKLC-RFYLAGFCPAGKTC 177
>gi|221059157|ref|XP_002260224.1| zinc finger protein [Plasmodium knowlesi strain H]
gi|193810297|emb|CAQ41491.1| zinc finger protein, putative [Plasmodium knowlesi strain H]
Length = 352
Score = 45.1 bits (105), Expect = 0.51, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
Query: 1885 LRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKI----AVCTKFLKGLCSNSDCKLTHK 1940
++ +K++ C+FF R GKC N C Y HD + I +C +KG C +C +H
Sbjct: 70 FKIQQKKEICKFFFRKGKC-IHNENCTYSHDVTPIYKISKLCKFLVKGTCEKENCIFSHD 128
Query: 1941 VIPERMPDC-SYFLQGLCTNKNCPYRHVHVNPNASTCEGF 1979
++ C + + C N C ++HV ++ + + + +
Sbjct: 129 Y---KLFFCRNNVIYNSCCNPMCKFKHVKIDSSINNADQY 165
>gi|224000976|ref|XP_002290160.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973582|gb|EED91912.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 556
Score = 45.1 bits (105), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 13/79 (16%)
Query: 1946 MPDCSYFLQGLCTNKNCPYRH----VHVNPNASTCEGFLKGYCADGDECRKKH------S 1995
+P C+Y L CT K C YRH + +P + C+ FL G C G C +H
Sbjct: 36 VPKCAYGLA--CTRKGCAYRHPESGAYEDPRSKICKPFLAGLCTYGSRCINRHPDDKEAD 93
Query: 1996 YVCPTFKATGSCALGAKCR 2014
V T+K SC+ G +C+
Sbjct: 94 AVKATYKQK-SCSYGDECQ 111
>gi|30466247|ref|NP_848671.1| cleavage and polyadenylation specificity factor subunit 4 [Mus
musculus]
gi|348568560|ref|XP_003470066.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 3 [Cavia porcellus]
gi|37999672|sp|Q8BQZ5.1|CPSF4_MOUSE RecName: Full=Cleavage and polyadenylation specificity factor subunit
4; AltName: Full=Cleavage and polyadenylation specificity
factor 30 kDa subunit; Short=CPSF 30 kDa subunit;
AltName: Full=Clipper homolog; AltName: Full=Clipper/CPSF
30K
gi|26337803|dbj|BAC32587.1| unnamed protein product [Mus musculus]
Length = 211
Score = 45.1 bits (105), Expect = 0.53, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 1915 DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQGLCTNKN-CPYRHVHVNPN 1972
D S AVC FLK C C H + E+ C ++L+GLC + C + H +
Sbjct: 34 DKSGAAVCEFFLKAACGKGGMCPFRH-ISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTK 92
Query: 1973 ASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCALGAKCRLHHPK 2019
C + K G CR +H+ +C + G C G C+ HP+
Sbjct: 93 MPECYFYSKF----GPLCRHRHTRRVICVNY-LVGFCPEGPSCKFMHPR 136
>gi|380805265|gb|AFE74508.1| zinc finger CCCH domain-containing protein 4, partial [Macaca
mulatta]
Length = 459
Score = 45.1 bits (105), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKH-SYVCPTFKATG 2005
C YF++G CT +C + H + + C+ ++ G+CA + C H + C + TG
Sbjct: 356 CKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTTG 415
Query: 2006 SCALGAKCRLHH 2017
+C G C H
Sbjct: 416 NCINGDDCMFSH 427
>gi|444728385|gb|ELW68843.1| DENN domain-containing protein 2A [Tupaia chinensis]
Length = 1319
Score = 44.7 bits (104), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 1951 YFLQGLCTN-KNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
YF+ G+C NC Y H + +P C+ F +GYC GD CR +HS
Sbjct: 901 YFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCIYGDRCRYEHS 947
>gi|148687046|gb|EDL18993.1| cleavage and polyadenylation specific factor 4, isoform CRA_b [Mus
musculus]
Length = 251
Score = 44.7 bits (104), Expect = 0.63, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 1915 DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQGLCTNKN-CPYRHVHVNPN 1972
D S AVC FLK C C H + E+ C ++L+GLC + C + H +
Sbjct: 58 DKSGAAVCEFFLKAACGKGGMCPFRH-ISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTK 116
Query: 1973 ASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCALGAKCRLHHPK 2019
C + K G CR +H+ +C + G C G C+ HP+
Sbjct: 117 MPECYFYSKF----GPLCRHRHTRRVICVNY-LVGFCPEGPSCKFMHPR 160
>gi|294895295|ref|XP_002775127.1| hypothetical protein Pmar_PMAR019756 [Perkinsus marinus ATCC 50983]
gi|239881067|gb|EER06943.1| hypothetical protein Pmar_PMAR019756 [Perkinsus marinus ATCC 50983]
Length = 923
Score = 44.7 bits (104), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 1974 STCEGFLKGYCADGDECRKKH--SYVCPTFKATGSCALGAKCRLHHPKSRSNGKKS 2027
+TC FL+G C+ G CR H C + TG C G +CR H SR+ K++
Sbjct: 462 ATCRDFLRGRCSRGGNCRYAHIDRNACRLWAETGKCRFGDQCRFQH-GSRAQNKEA 516
>gi|395837385|ref|XP_003791616.1| PREDICTED: E3 ubiquitin-protein ligase makorin-1 [Otolemur garnettii]
Length = 492
Score = 44.7 bits (104), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCTN-KNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C NC Y H + +P C+ + +GYC GD CR +HS
Sbjct: 71 CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYYQRGYCIYGDRCRYEHS 119
>gi|327272280|ref|XP_003220913.1| PREDICTED: e3 ubiquitin-protein ligase makorin-1-like [Anolis
carolinensis]
Length = 486
Score = 44.7 bits (104), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCTN-KNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C NC Y H ++ + +A C F +G CA GD CR +H+
Sbjct: 66 CRYFMHGVCKEGDNCRYSHDLYTSQSAMVCRYFQRGCCAYGDRCRYEHT 114
>gi|338713971|ref|XP_001495266.3| PREDICTED: zinc finger CCCH domain-containing protein 8-like [Equus
caballus]
Length = 306
Score = 44.3 bits (103), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+ C + C + H + C+ +++GYC G+ C H+ Y C +
Sbjct: 213 CKYFLERKCIKGDQCKFDHDAEIEKKKEMCKFYVQGYCTRGENCLYLHNEYPCKFYHTGA 272
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 273 KCYQGEYCKFSH 284
>gi|349603441|gb|AEP99279.1| Zinc finger CCCH domain-containing protein 8-like protein [Equus
caballus]
Length = 305
Score = 44.3 bits (103), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+ C + C + H + C+ +++GYC G+ C H+ Y C +
Sbjct: 212 CKYFLERKCIKGDQCKFDHDAEIEKKKEMCKFYVQGYCTRGENCLYLHNEYPCKFYHTGA 271
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 272 KCYQGEYCKFSH 283
>gi|348558541|ref|XP_003465076.1| PREDICTED: zinc finger CCCH domain-containing protein 8-like [Cavia
porcellus]
Length = 343
Score = 44.3 bits (103), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+ C + C + H + C+ +++GYC G+ C H+ Y C +
Sbjct: 249 CKYFLERKCIKGDQCKFDHDTEMEKKKEMCKFYVQGYCTRGENCLYLHNEYPCKFYHTGT 308
Query: 2006 SCALGAKCRLHH 2017
C G CR H
Sbjct: 309 KCYQGEHCRFSH 320
>gi|357609289|gb|EHJ66383.1| hypothetical protein KGM_18866 [Danaus plexippus]
Length = 551
Score = 44.3 bits (103), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 22/103 (21%)
Query: 1884 RLRLARKRKY--CQFFTRFGKCNKDNGKCPYIHDPSKIA---VCTKFLKGLCSNSDCKLT 1938
R+ + RK+ C F+ + C K + C + H+PS + +CT + +G C + CKL
Sbjct: 18 RIAMESPRKFNDCYFYY-YSTCTKGDN-CMFRHEPSALGCETMCTAWQQGKCLDKCCKLR 75
Query: 1939 H-------KVIPERMPDCSYFLQ-GLCTNKNCPYRHVHVNPNA 1973
H K IP C + Q G C K+CP+ +H NP+A
Sbjct: 76 HMELRKNRKQIP-----CYWENQPGGCQKKHCPF--MHKNPDA 111
>gi|312073087|ref|XP_003139362.1| zinc finger CCCH type domain-containing protein 6 [Loa loa]
Length = 628
Score = 44.3 bits (103), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 12/84 (14%)
Query: 1892 KYCQFFTRFGKCNKDNGKCPYIHDPS----KIAVCTKFLKGLCSNS-DCKLTHKVIPERM 1946
+ C+FF R G C +D C Y HD + K +C + +G C C L H P
Sbjct: 38 QICKFF-REGYC-RDGESCSYSHDAADSGRKAELCKFYQQGFCKKGLQCPLLHGEYP--- 92
Query: 1947 PDCSYFLQGLCTNKNCPYRHVHVN 1970
C F +G C+ C + H+ +N
Sbjct: 93 --CKAFHKGECSKDPCQFSHLPLN 114
>gi|149034888|gb|EDL89608.1| rCG42591, isoform CRA_c [Rattus norvegicus]
Length = 180
Score = 44.3 bits (103), Expect = 0.78, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 1915 DPSKIAVCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQGLCTNKN-CPYRHVHVNPN 1972
D S AVC FLK C C H + E+ C ++L+GLC + C + H +
Sbjct: 2 DKSGAAVCEFFLKAACGKGGMCPFRH-ISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTK 60
Query: 1973 ASTCEGFLKGYCADGDECRKKHS--YVCPTFKATGSCALGAKCRLHHPK 2019
C + K G CR +H+ +C + G C G C+ HP+
Sbjct: 61 MPECYFYSKF----GPLCRHRHTRRVICVNY-LVGFCPEGPSCKFMHPR 104
>gi|389583886|dbj|GAB66620.1| hypothetical protein PCYB_094050 [Plasmodium cynomolgi strain B]
Length = 2252
Score = 44.3 bits (103), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 50/133 (37%), Gaps = 30/133 (22%)
Query: 1913 IHDPS-KIAVCTKFLKGLCSNSD-CKLTHKVIPER-------MPDCSYFLQGLCTNKNCP 1963
IHD +I +C KGLC D C H R C +L+ C N NC
Sbjct: 521 IHDQYYRIKLCPFLKKGLCQKGDNCSYAHSTDTLRSCMNLMKTKICQLWLKNECRNPNCV 580
Query: 1964 YRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHHPKSRSN 2023
Y H EG L+ A D + K +C F G+C G KCR H
Sbjct: 581 YAH---------GEGELR---ATPDYFKTK---LCKYFDKEGTCPSGEKCRHAH------ 619
Query: 2024 GKKSRRSRKPKNT 2036
G+ R R K T
Sbjct: 620 GQAELRQRNYKKT 632
>gi|359476779|ref|XP_002278934.2| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
isoform 1 [Vitis vinifera]
Length = 441
Score = 44.3 bits (103), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 56/135 (41%), Gaps = 25/135 (18%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDPS-KIAVCTKFLKGLCSNSDCKLTHKVIPERM--PDCS 1950
C ++ R G C + C + H P+ K+A+ T +KG PERM P+C
Sbjct: 54 CSYYIRTGLC-RFGITCRFNHPPNRKLAIATARMKG------------EFPERMGQPECQ 100
Query: 1951 YFLQ-GLCT-NKNCPYRHVHVNPN-ASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSC 2007
Y+L+ G C C + H A + GY DE C + TG C
Sbjct: 101 YYLKTGTCKFGATCKFHHPRDKAGIAGRVSLNILGYPLRPDEID------CAYYLRTGQC 154
Query: 2008 ALGAKCRLHHPKSRS 2022
G+ C+ HHP+ S
Sbjct: 155 KFGSTCKFHHPQPSS 169
>gi|302782013|ref|XP_002972780.1| hypothetical protein SELMODRAFT_441970 [Selaginella moellendorffii]
gi|300159381|gb|EFJ26001.1| hypothetical protein SELMODRAFT_441970 [Selaginella moellendorffii]
Length = 872
Score = 44.3 bits (103), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 1976 CEGFLKGYCADGDECRKKHSYVCPTFKATGSCALGAKCRLHH 2017
C F +G+CA G+ C HS VC F + C GA CR H
Sbjct: 591 CVYFRRGFCAKGNGCEFSHSAVCKFFLSGDGCRYGAHCRYKH 632
>gi|335284940|ref|XP_003354736.1| PREDICTED: zinc finger CCCH domain-containing protein 8-like [Sus
scrofa]
Length = 308
Score = 43.9 bits (102), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+ C + C + H + C+ +++GYC G+ C H+ Y C +
Sbjct: 215 CKYFLERKCIKGDQCKFDHDAEIEKKKEMCKFYVQGYCTRGENCLYLHNEYPCKFYHTGA 274
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 275 KCYQGEYCKFSH 286
>gi|354481777|ref|XP_003503077.1| PREDICTED: E3 ubiquitin-protein ligase makorin-1-like [Cricetulus
griseus]
Length = 495
Score = 43.9 bits (102), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 1951 YFLQGLCTN-KNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
YF+ G+C NC Y H + +P C+ F +GYC GD CR +HS
Sbjct: 77 YFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCVYGDRCRYEHS 123
>gi|355565991|gb|EHH22420.1| hypothetical protein EGK_05681 [Macaca mulatta]
Length = 292
Score = 43.9 bits (102), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+ C + C + H + C+ +L+GYC G+ C H+ Y C +
Sbjct: 198 CKYFLERKCIKGDQCKFDHDAEIEKKKEMCKFYLQGYCTRGENCLYLHNEYPCKFYHTGT 257
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 258 KCYQGEYCKFSH 269
Score = 42.4 bits (98), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 9/83 (10%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKV-IPERMPDCSYFLQGLCT-NKNCPYRHVHVNPNASTCE 1977
+C FL+ C D CK H I ++ C ++LQG CT +NC Y H N C+
Sbjct: 197 ICKYFLERKCIKGDQCKFDHDAEIEKKKEMCKFYLQGYCTRGENCLYLH-----NEYPCK 251
Query: 1978 GFLKG-YCADGDECRKKHSYVCP 1999
+ G C G+ C+ H+ + P
Sbjct: 252 FYHTGTKCYQGEYCKFSHAPLTP 274
>gi|82243428|sp|Q8JFF3.1|MKRN1_SERQU RecName: Full=Probable E3 ubiquitin-protein ligase makorin-1
gi|22255324|dbj|BAB91214.2| gene encoding protein featuring ring-finger [Seriola quinqueradiata]
gi|22255326|dbj|BAB91215.2| gene encoding protein featuring ring-finger [Seriola quinqueradiata]
Length = 435
Score = 43.9 bits (102), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 1949 CSYFLQGLCT-NKNCPYRHVHVN--PNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ GLC NC Y H N P A C+ F KG C GD CR +H
Sbjct: 24 CRYFMHGLCKEGDNCRYSHDLTNSKPAAMICKFFQKGNCVFGDRCRFEHC 73
Score = 40.8 bits (94), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 9/57 (15%)
Query: 1975 TCEGFLKGYCADGDECRKKH--------SYVCPTFKATGSCALGAKCRLHHPKSRSN 2023
TC F+ G C +GD CR H + +C F+ G+C G +CR H K N
Sbjct: 23 TCRYFMHGLCKEGDNCRYSHDLTNSKPAAMICKFFQ-KGNCVFGDRCRFEHCKPAKN 78
>gi|37590960|dbj|BAC98837.1| Makorin1 [Seriola quinqueradiata]
Length = 418
Score = 43.9 bits (102), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 1949 CSYFLQGLCT-NKNCPYRHVHVN--PNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ GLC NC Y H N P A C+ F KG C GD CR +H
Sbjct: 7 CRYFMHGLCKEGDNCRYSHDLTNSKPAAMICKFFQKGNCVFGDRCRFEHC 56
Score = 40.8 bits (94), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 9/57 (15%)
Query: 1975 TCEGFLKGYCADGDECRKKH--------SYVCPTFKATGSCALGAKCRLHHPKSRSN 2023
TC F+ G C +GD CR H + +C F+ G+C G +CR H K N
Sbjct: 6 TCRYFMHGLCKEGDNCRYSHDLTNSKPAAMICKFFQ-KGNCVFGDRCRFEHCKPAKN 61
>gi|326433896|gb|EGD79466.1| hypothetical protein PTSG_10032 [Salpingoeca sp. ATCC 50818]
Length = 660
Score = 43.9 bits (102), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 1949 CSYFLQGLCT-NKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C YF+ G CT + CP+ H +TC+ +L G C GD CR H
Sbjct: 9 CRYFVHGACTRGEQCPFSHDMAAKPDNTCKFYLAGSCHYGDRCRYDH 55
>gi|115497070|ref|NP_001068759.1| zinc finger CCCH domain-containing protein 8 [Bos taurus]
gi|109658411|gb|AAI18121.1| Zinc finger CCCH-type containing 8 [Bos taurus]
gi|296482793|tpg|DAA24908.1| TPA: zinc finger CCCH-type containing 8 [Bos taurus]
Length = 303
Score = 43.9 bits (102), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+ C + C + H + C+ +++GYC G+ C H+ Y C +
Sbjct: 210 CKYFLERKCIKGDQCKFDHDAEIEKKKEMCKFYVQGYCTRGENCLYLHNEYPCKFYHTGA 269
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 270 KCYQGEHCKFSH 281
>gi|351697947|gb|EHB00866.1| Zinc finger CCCH domain-containing protein 4 [Heterocephalus glaber]
Length = 1364
Score = 43.9 bits (102), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 11/80 (13%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHSYVC-------- 1998
C YF++G CT +C + H + + C+ ++ G+CA + C H +C
Sbjct: 477 CKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAEHCPYMHDILCHWRQLLLL 536
Query: 1999 -PTFKATGSCALGAKCRLHH 2017
+ TG+C G C H
Sbjct: 537 LWLYHTTGNCINGDDCMFSH 556
>gi|426228521|ref|XP_004008352.1| PREDICTED: E3 ubiquitin-protein ligase makorin-1 [Ovis aries]
Length = 434
Score = 43.9 bits (102), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 1951 YFLQGLCTN-KNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
YFL G+C NC Y H + +P C+ F +GYC GD CR +HS
Sbjct: 17 YFLHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCIYGDRCRYEHS 63
>gi|345782013|ref|XP_540178.3| PREDICTED: zinc finger CCCH domain-containing protein 8 [Canis lupus
familiaris]
Length = 305
Score = 43.9 bits (102), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+ C + C + H + C+ +++GYC G+ C H+ Y C +
Sbjct: 212 CKYFLERKCIKGDQCKFDHDAEIEKKKEMCKFYVQGYCTRGENCLYLHNEYPCKFYHTGT 271
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 272 KCYQGEYCKFSH 283
>gi|291413292|ref|XP_002722910.1| PREDICTED: makorin ring finger protein 1 [Oryctolagus cuniculus]
Length = 433
Score = 43.5 bits (101), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 1951 YFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
YFL G+C NC Y H + +P C+ F +GYC GD CR +HS
Sbjct: 16 YFLHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCIYGDRCRYEHS 62
>gi|301777878|ref|XP_002924362.1| PREDICTED: zinc finger CCCH domain-containing protein 8-like
[Ailuropoda melanoleuca]
Length = 305
Score = 43.5 bits (101), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+ C + C + H + C+ +++GYC G+ C H+ Y C +
Sbjct: 212 CKYFLERKCIKGDQCKFDHDAEIEKKKEMCKFYVQGYCTRGENCLYLHNEYPCKFYHTGT 271
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 272 KCYQGEYCKFSH 283
>gi|168031758|ref|XP_001768387.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680312|gb|EDQ66749.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 332
Score = 43.5 bits (101), Expect = 1.2, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 10/84 (11%)
Query: 1943 PER--MPDCSYFLQ-GLCT-NKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVC 1998
PER PDC Y+++ GLC C Y H PN +G G+ + C
Sbjct: 22 PERPGEPDCVYYMRTGLCGFGMTCRYNH---PPNRKLAAAATRG---KGEYPERVGHPEC 75
Query: 1999 PTFKATGSCALGAKCRLHHPKSRS 2022
+ TG+C GA C+ HHP+ ++
Sbjct: 76 QYYLKTGTCKFGATCKYHHPREKA 99
>gi|66806741|ref|XP_637093.1| small MutS related family protein [Dictyostelium discoideum AX4]
gi|60465510|gb|EAL63595.1| small MutS related family protein [Dictyostelium discoideum AX4]
Length = 606
Score = 43.5 bits (101), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 1917 SKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLCTNKNCPYRHVHVNPNASTC 1976
SK ++C L+G+C DCK H C Y L G C KNCPYRH + C
Sbjct: 77 SKNSICVYDLQGICLVKDCKYQHVNTLPHPNVCKYTLYG-CQVKNCPYRH---SKGTIIC 132
Query: 1977 EGFLKGYCADGDECRKKHSY 1996
+ +L C + C H +
Sbjct: 133 KHWLTSNCFNPT-CNYSHQF 151
>gi|402909903|ref|XP_003917642.1| PREDICTED: putative E3 ubiquitin-protein ligase makorin-4-like [Papio
anubis]
Length = 503
Score = 43.5 bits (101), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCTN-KNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C NC Y H + P C F +GYC GD CR +HS
Sbjct: 86 CRYFVYGICKEGDNCRYSHDLSDRPCGVVCSCFQRGYCLYGDRCRCEHS 134
>gi|70948338|ref|XP_743693.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56523314|emb|CAH77773.1| hypothetical protein PC000515.02.0 [Plasmodium chabaudi chabaudi]
Length = 226
Score = 43.5 bits (101), Expect = 1.3, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 26/100 (26%)
Query: 1921 VCTKFLKGLC-SNSDCKLTHKVIPERMPDCSYFLQ-GLCTNK---NCPYRHVHVNPNAS- 1974
+C ++K +C N C H++I +R+P C +++ C++K +C +RH N N +
Sbjct: 94 ICIHYIKNMCMKNLFCNYLHQLIYDRIPPCKNYIKYNYCSDKIRGSCMFRHTLENTNTNY 153
Query: 1975 --------------------TCEGFLKGYCADGDECRKKH 1994
C +L G+C G CRK H
Sbjct: 154 YSENKEESLDEALKFLHEKNICVNYLLGFCNLGYNCRKIH 193
>gi|397484819|ref|XP_003813565.1| PREDICTED: E3 ubiquitin-protein ligase makorin-1 [Pan paniscus]
Length = 607
Score = 43.5 bits (101), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 1951 YFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
YF+ G+C NC Y H + +P + C+ F +GYC GD CR +HS
Sbjct: 188 YFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQRGYCIYGDRCRYEHS 234
>gi|303271129|ref|XP_003054926.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462900|gb|EEH60178.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 354
Score = 43.5 bits (101), Expect = 1.3, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 1949 CSYFLQGLCTN-KNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
C Y+L G C N C + H P ++ C +L G CA GD+CR H
Sbjct: 7 CKYYLHGACRNGAGCRFSHSMDAPKSTVCAYYLAGNCAYGDKCRYDH 53
>gi|426224153|ref|XP_004006238.1| PREDICTED: zinc finger CCCH domain-containing protein 8 [Ovis aries]
Length = 303
Score = 43.5 bits (101), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+ C + C + H + C+ +++GYC G+ C H+ Y C +
Sbjct: 210 CKYFLERKCIKGDQCKFDHDAEIEKKKEMCKFYVQGYCTRGENCLYLHNEYPCKFYHTGA 269
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 270 KCYQGEYCKFSH 281
>gi|351701509|gb|EHB04428.1| E3 ubiquitin-protein ligase makorin-1 [Heterocephalus glaber]
Length = 426
Score = 43.5 bits (101), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 1951 YFLQGLCTN-KNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
YF+ G+C NC Y H + +P C+ F +GYC GD CR +HS
Sbjct: 8 YFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCVYGDRCRYEHS 54
>gi|253741448|gb|EES98318.1| Zinc finger domain-containing protein [Giardia intestinalis ATCC
50581]
Length = 264
Score = 43.5 bits (101), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 82/195 (42%), Gaps = 25/195 (12%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDPS--KIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSY 1951
C+ + R +C K + C +IH+ + K+ +C KF C+N C HK +R C
Sbjct: 44 CKHYIR-DQCKKGD-DCEFIHEYAIDKLDLC-KFGDN-CTNHYCIYNHKS-SKRADVCCS 98
Query: 1952 FLQGLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS--------YVCPTFKA 2003
F +G+C NK C RH+ + C +L G+C +G C +H Y K
Sbjct: 99 FARGVCLNKTCDSRHI----VYTLCPRYLAGFCPEGPNCTMQHPQLSGPITIYTRQVMKK 154
Query: 2004 TGSCALGAKCRLHHPKSRSNGKKSRRSRKPKNTHGRYFGSMLVEDSESQTAM-SERPTVQ 2062
G C +H + ++ R N H G +ED+ T M + PT +
Sbjct: 155 PGYIGHCGHCCKYHGDAHEITDNDKKDR--YNVH---HGQTSIEDNTDFTGMLLQCPTAK 209
Query: 2063 NNGNLFVEGKLVDYI 2077
+ L + +++ +
Sbjct: 210 DGSRLARDNAIINKV 224
>gi|395853713|ref|XP_003799348.1| PREDICTED: zinc finger CCCH domain-containing protein 8 [Otolemur
garnettii]
Length = 306
Score = 43.5 bits (101), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+ C + C + H + C+ +++GYC G+ C H+ Y C +
Sbjct: 212 CKYFLERKCIKGDQCKFDHDAEIEKKKEMCKFYVQGYCTRGENCLYLHNEYPCKFYHTGT 271
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 272 KCYQGEYCKFSH 283
>gi|432942710|ref|XP_004083045.1| PREDICTED: probable E3 ubiquitin-protein ligase makorin-1-like
isoform 1 [Oryzias latipes]
Length = 429
Score = 43.5 bits (101), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 1949 CSYFLQGLCTN-KNCPYRH--VHVNPNASTCEGFLKGYCADGDECRKKHSYV 1997
C YF+ GLC NC Y H P C+ F KG C GD CR +HS V
Sbjct: 22 CRYFMHGLCKEGDNCRYSHDLTSSKPATMICKFFQKGNCVYGDRCRFEHSKV 73
>gi|395739051|ref|XP_002818578.2| PREDICTED: E3 ubiquitin-protein ligase makorin-1 [Pongo abelii]
Length = 497
Score = 43.5 bits (101), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 1951 YFLQGLCTN-KNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
YF+ G+C NC Y H + +P + C+ F +GYC GD CR +HS
Sbjct: 78 YFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQRGYCIYGDRCRYEHS 124
>gi|294954895|ref|XP_002788348.1| Cleavage and polyadenylation specificity factor 30 kDa subunit,
putative [Perkinsus marinus ATCC 50983]
gi|239903660|gb|EER20144.1| Cleavage and polyadenylation specificity factor 30 kDa subunit,
putative [Perkinsus marinus ATCC 50983]
Length = 138
Score = 43.5 bits (101), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 17/91 (18%)
Query: 1905 KDNGKCPYIHDPSKIAVCTKFLKGLCSNS-DCKLTHKVIPERMPDCSYFLQGLCTNKNCP 1963
++ CP+ HDP I +CT +L G C N C+ +H++ + P + G
Sbjct: 3 RNGTSCPFRHDPKSI-ICTYYLHGNCRNGISCRFSHELPDTQQPAVEEGVDG-------- 53
Query: 1964 YRHVHVNPNASTCEGFLKGYCADGDECRKKH 1994
P C+ F G C G CR +H
Sbjct: 54 -------PPPDVCKFFWHGSCRAGSSCRWRH 77
>gi|148681660|gb|EDL13607.1| makorin, ring finger protein, 1, isoform CRA_c [Mus musculus]
Length = 419
Score = 43.1 bits (100), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 1951 YFLQGLCTN-KNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
YF+ G+C NC Y H + +P C+ F +GYC GD CR +HS
Sbjct: 1 YFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCVYGDRCRYEHS 47
>gi|85719326|ref|NP_065619.2| zinc finger CCCH domain-containing protein 8 [Mus musculus]
gi|47117633|sp|Q9JJ48.2|ZC3H8_MOUSE RecName: Full=Zinc finger CCCH domain-containing protein 8; AltName:
Full=Fetal liver zinc finger protein 1
gi|29144956|gb|AAH48687.1| Zinc finger CCCH type containing 8 [Mus musculus]
gi|148696275|gb|EDL28222.1| zinc finger CCCH type containing 8 [Mus musculus]
Length = 305
Score = 43.1 bits (100), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+ C + C + H + C+ +++GYC G+ C HS Y C +
Sbjct: 211 CKYFLERKCIKGDQCKFDHDAEIEKKKEMCKYYVQGYCTKGENCLYLHSEYPCKFYHTGT 270
Query: 2006 SCALGAKCRLHH 2017
C G C H
Sbjct: 271 KCYQGDHCNFSH 282
Score = 40.8 bits (94), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKV-IPERMPDCSYFLQGLCTN-KNCPYRHVHVNPNASTCE 1977
VC FL+ C D CK H I ++ C Y++QG CT +NC Y H C+
Sbjct: 210 VCKYFLERKCIKGDQCKFDHDAEIEKKKEMCKYYVQGYCTKGENCLYLHSEY-----PCK 264
Query: 1978 GFLKG-YCADGDECRKKHS 1995
+ G C GD C H+
Sbjct: 265 FYHTGTKCYQGDHCNFSHA 283
>gi|21618936|gb|AAH32001.1| ZC3H8 protein [Homo sapiens]
gi|312153288|gb|ADQ33156.1| zinc finger CCCH-type containing 8 [synthetic construct]
Length = 297
Score = 43.1 bits (100), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+ C + C + H + C+ +++GYC G+ C H+ Y C +
Sbjct: 197 CKYFLERKCIKGDQCKFDHDAEIEKKKEMCKFYVQGYCTRGENCLYLHNEYPCKFYHTGT 256
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 257 KCYQGEYCKFSH 268
>gi|268553729|ref|XP_002634851.1| Hypothetical protein CBG13968 [Caenorhabditis briggsae]
Length = 435
Score = 43.1 bits (100), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 1943 PERMPDCSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS 1995
P + DC YF G+C+ N C +RH + + C+ L G C+ G CR KH+
Sbjct: 5 PTTLQDCRYFANGICSKGNACTFRHDETARSENICQFHLAGKCSFGGACRFKHT 58
>gi|297303636|ref|XP_002806243.1| PREDICTED: putative E3 ubiquitin-protein ligase makorin-4-like
[Macaca mulatta]
Length = 465
Score = 43.1 bits (100), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCTN-KNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C NC Y H + P C F +GYC GD CR +HS
Sbjct: 48 CRYFVYGICKEGDNCRYSHDLSDRPCGVVCSCFKRGYCLYGDRCRCEHS 96
>gi|341877927|gb|EGT33862.1| hypothetical protein CAEBREN_04146 [Caenorhabditis brenneri]
Length = 444
Score = 43.1 bits (100), Expect = 1.7, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 1942 IPERMPDCSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKHS 1995
+P+ DC Y++ G+C+ N C + H N C+ + G C+ G CR KHS
Sbjct: 1 MPKYNTDCRYYVNGICSKGNACAFIHDQAARNEYVCQFNMAGKCSFGQACRFKHS 55
>gi|355561051|gb|EHH17737.1| hypothetical protein EGK_14199, partial [Macaca mulatta]
Length = 479
Score = 43.1 bits (100), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 1951 YFLQGLCTN-KNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
YF+ G+C NC Y H + +P + C+ F +GYC GD CR +HS
Sbjct: 60 YFMHGVCKEGDNCRYSHDLSDSPYSVVCKYFQRGYCIYGDRCRYEHS 106
>gi|125556470|gb|EAZ02076.1| hypothetical protein OsI_24157 [Oryza sativa Indica Group]
Length = 543
Score = 43.1 bits (100), Expect = 1.7, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 1935 CKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKK 1993
C H+ RMP C +F G C +C Y+H + + C + G+C +G CR K
Sbjct: 6 CGFLHQFDKARMPVCRFFRDFGECREPDCAYKHSY--DDVKECNMYKMGFCPNGPNCRYK 63
Query: 1994 H 1994
H
Sbjct: 64 H 64
>gi|68074313|ref|XP_679071.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56499725|emb|CAH98732.1| conserved hypothetical protein [Plasmodium berghei]
Length = 528
Score = 43.1 bits (100), Expect = 1.7, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 26/100 (26%)
Query: 1921 VCTKFLKGLC-SNSDCKLTHKVIPERMPDCSYFLQ-GLCTNK---NCPYRHVHVNPN--- 1972
+C ++K +C N C H++I +R+P C +++ C +K +C +RH N N
Sbjct: 42 ICIHYIKNMCMKNLFCNYLHQLIYDRIPPCKNYIKYNYCADKIRGSCMFRHTLENTNMNY 101
Query: 1973 ------------------ASTCEGFLKGYCADGDECRKKH 1994
+ C +L G+C G CRK H
Sbjct: 102 YNENKEEHLDEALKFLHEKNICVNYLLGFCNLGYNCRKTH 141
>gi|47207919|emb|CAG05196.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1216
Score = 43.1 bits (100), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 15/84 (17%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKH------------ 1994
C Y+++G CT +C + H V + C+ ++ G+CA D C H
Sbjct: 198 CKYYIEGRCTWGDHCNFSHDVDLPKKKELCKFYITGFCARADHCPYMHDILKCFSLIQIQ 257
Query: 1995 -SYVCPTFKATGSCALGAKCRLHH 2017
+ C F TG+C +C H
Sbjct: 258 REFPCKLFHTTGNCVNNDECMFSH 281
>gi|197097906|ref|NP_001125487.1| zinc finger CCCH domain-containing protein 8 [Pongo abelii]
gi|55728208|emb|CAH90852.1| hypothetical protein [Pongo abelii]
Length = 291
Score = 43.1 bits (100), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+ C + C + H + C+ +++GYC G+ C H+ Y C +
Sbjct: 197 CKYFLERKCIKGDQCKFDHDAEIEKKKEMCKFYVQGYCTRGENCLYLHNEYPCKFYHTGT 256
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 257 KCYQGEYCKFSH 268
>gi|332257252|ref|XP_003277723.1| PREDICTED: zinc finger CCCH domain-containing protein 8 [Nomascus
leucogenys]
Length = 294
Score = 43.1 bits (100), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+ C + C + H + C+ +++GYC G+ C H+ Y C +
Sbjct: 200 CKYFLERKCIKGDQCKFDHDAEIEKKKEMCKFYVQGYCTRGENCLYLHNEYPCKFYHTGT 259
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 260 KCYQGEYCKFSH 271
>gi|218186710|gb|EEC69137.1| hypothetical protein OsI_38063 [Oryza sativa Indica Group]
Length = 395
Score = 43.1 bits (100), Expect = 1.8, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Query: 1943 PERM--PDCSYFLQ-GLCT-NKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVC 1998
PER+ PDCSY+++ GLC C + H PN + +G+ + C
Sbjct: 64 PERIGEPDCSYYMRTGLCRFGMTCKFNH---PPNRKLAVAAAR---MNGEYPYRVGQPEC 117
Query: 1999 PTFKATGSCALGAKCRLHHPKSRS 2022
+ TG+C GA C+ HHP+ ++
Sbjct: 118 QYYLKTGTCKFGATCKFHHPREKA 141
>gi|440902733|gb|ELR53486.1| E3 ubiquitin-protein ligase makorin-1, partial [Bos grunniens mutus]
Length = 419
Score = 43.1 bits (100), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 1951 YFLQGLCTN-KNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
YF+ G+C NC Y H + +P C+ F +GYC GD CR +HS
Sbjct: 2 YFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCIYGDRCRYEHS 48
>gi|281350493|gb|EFB26077.1| hypothetical protein PANDA_013673 [Ailuropoda melanoleuca]
Length = 236
Score = 43.1 bits (100), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGS 2006
C YFL+ C + C + H + C+ +++GYC G+ C H+ + F TG+
Sbjct: 151 CKYFLERKCIKGDQCKFDHDAEIEKKKEMCKFYVQGYCTRGENCLYLHNILYHKFYHTGT 210
Query: 2007 -CALGAKCRLHH 2017
C G C+ H
Sbjct: 211 KCYQGEYCKFSH 222
>gi|8347090|gb|AAF74513.1|AF061961_1 putative zinc finger protein FLIZ1 [Mus musculus]
Length = 305
Score = 43.1 bits (100), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+ C + C + H + C+ +++GYC G+ C HS Y C +
Sbjct: 211 CKYFLERKCIKGDQCKFDHDAEIEKKKEMCKYYVQGYCTKGENCLYLHSEYPCKFYHTGT 270
Query: 2006 SCALGAKCRLHH 2017
C G C H
Sbjct: 271 KCYQGDHCNFSH 282
Score = 40.8 bits (94), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKV-IPERMPDCSYFLQGLCTN-KNCPYRHVHVNPNASTCE 1977
VC FL+ C D CK H I ++ C Y++QG CT +NC Y H C+
Sbjct: 210 VCKYFLERKCIKGDQCKFDHDAEIEKKKEMCKYYVQGYCTKGENCLYLHSEY-----PCK 264
Query: 1978 GFLKG-YCADGDECRKKHS 1995
+ G C GD C H+
Sbjct: 265 FYHTGTKCYQGDHCNFSHA 283
>gi|355757293|gb|EHH60818.1| hypothetical protein EGM_18690, partial [Macaca fascicularis]
Length = 393
Score = 43.1 bits (100), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCTN-KNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C NC Y H + P C F +GYC GD CR +HS
Sbjct: 5 CRYFVYGICKEGDNCRYSHDLSDRPCGVVCSCFKRGYCLYGDRCRCEHS 53
>gi|355704724|gb|EHH30649.1| hypothetical protein EGK_20399, partial [Macaca mulatta]
Length = 399
Score = 43.1 bits (100), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCTN-KNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C NC Y H + P C F +GYC GD CR +HS
Sbjct: 11 CRYFVYGICKEGDNCRYSHDLSDRPCGVVCSCFKRGYCLYGDRCRCEHS 59
>gi|432942712|ref|XP_004083046.1| PREDICTED: probable E3 ubiquitin-protein ligase makorin-1-like
isoform 2 [Oryzias latipes]
Length = 436
Score = 43.1 bits (100), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Query: 1949 CSYFLQGLCTN-KNCPYRH--VHVNPNASTCEGFLKGYCADGDECRKKHSYV 1997
C YF+ GLC NC Y H P C+ F KG C GD CR +HS V
Sbjct: 22 CRYFMHGLCKEGDNCRYSHDLTSSKPATMICKFFQKGNCVYGDRCRFEHSKV 73
>gi|426336829|ref|XP_004031657.1| PREDICTED: zinc finger CCCH domain-containing protein 8 [Gorilla
gorilla gorilla]
Length = 291
Score = 43.1 bits (100), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+ C + C + H + C+ +++GYC G+ C H+ Y C +
Sbjct: 197 CKYFLERKCIKGDQCKFDHDAEIEKKKEMCKFYVQGYCTRGENCLYLHNEYPCKFYHTGT 256
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 257 KCYQGEYCKFSH 268
>gi|281340120|gb|EFB15704.1| hypothetical protein PANDA_002105 [Ailuropoda melanoleuca]
Length = 421
Score = 43.1 bits (100), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 1951 YFLQGLCTN-KNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
YF+ G+C NC Y H + +P C+ F +GYC GD CR +HS
Sbjct: 2 YFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGYCIYGDRCRYEHS 48
>gi|359476781|ref|XP_003631888.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
isoform 2 [Vitis vinifera]
Length = 393
Score = 43.1 bits (100), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 56/135 (41%), Gaps = 25/135 (18%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDPS-KIAVCTKFLKGLCSNSDCKLTHKVIPERM--PDCS 1950
C ++ R G C + C + H P+ K+A+ T +KG PERM P+C
Sbjct: 54 CSYYIRTGLC-RFGITCRFNHPPNRKLAIATARMKG------------EFPERMGQPECQ 100
Query: 1951 YFLQ-GLCT-NKNCPYRHVHVNPN-ASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSC 2007
Y+L+ G C C + H A + GY DE C + TG C
Sbjct: 101 YYLKTGTCKFGATCKFHHPRDKAGIAGRVSLNILGYPLRPDEID------CAYYLRTGQC 154
Query: 2008 ALGAKCRLHHPKSRS 2022
G+ C+ HHP+ S
Sbjct: 155 KFGSTCKFHHPQPSS 169
>gi|354471220|ref|XP_003497841.1| PREDICTED: zinc finger CCCH domain-containing protein 8-like
[Cricetulus griseus]
gi|344248840|gb|EGW04944.1| Zinc finger CCCH domain-containing protein 8 [Cricetulus griseus]
Length = 306
Score = 42.7 bits (99), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 9/79 (11%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKV-IPERMPDCSYFLQGLCTN-KNCPYRHVHVNPNASTCE 1977
VC FL+ C D CK H I ++ C Y++QG CT +NC Y H N C+
Sbjct: 211 VCKYFLERKCIKGDQCKFDHDAEIEKKKEMCKYYVQGYCTKGENCLYLH-----NEYPCK 265
Query: 1978 GFLKG-YCADGDECRKKHS 1995
+ G C GD C H+
Sbjct: 266 FYHTGTKCYQGDHCNFSHA 284
Score = 41.6 bits (96), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+ C + C + H + C+ +++GYC G+ C H+ Y C +
Sbjct: 212 CKYFLERKCIKGDQCKFDHDAEIEKKKEMCKYYVQGYCTKGENCLYLHNEYPCKFYHTGT 271
Query: 2006 SCALGAKCRLHH 2017
C G C H
Sbjct: 272 KCYQGDHCNFSH 283
>gi|297807877|ref|XP_002871822.1| hypothetical protein ARALYDRAFT_488738 [Arabidopsis lyrata subsp.
lyrata]
gi|297317659|gb|EFH48081.1| hypothetical protein ARALYDRAFT_488738 [Arabidopsis lyrata subsp.
lyrata]
Length = 474
Score = 42.7 bits (99), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 1942 IPERM--PDCSYFLQ-GLC-TNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYV 1997
PER PDC YFL+ G+C C + H N + G L+ G+ + V
Sbjct: 48 FPERPDEPDCIYFLRTGVCGYGSRCRFNHPR---NRAPVLGSLR--TEAGEFPERMGQPV 102
Query: 1998 CPTFKATGSCALGAKCRLHHPKSRSNGKKS 2027
C F TG+C GA C+ HHP+ G S
Sbjct: 103 CQHFMRTGTCKFGASCKYHHPRQGGGGGDS 132
>gi|296223265|ref|XP_002757546.1| PREDICTED: zinc finger CCCH domain-containing protein 8 [Callithrix
jacchus]
Length = 288
Score = 42.7 bits (99), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+ C + C + H + C+ +++GYC G+ C H+ Y C +
Sbjct: 194 CKYFLERKCIKGDQCKFDHDAEIEKKKEMCKFYVQGYCTRGENCLYLHNEYPCKFYHTGT 253
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 254 KCYQGEYCKFSH 265
>gi|45382057|ref|NP_990073.1| makorin ring finger protein 1 [Gallus gallus]
gi|6572970|gb|AAF17490.1|AF192787_1 makorin 1 [Gallus gallus]
Length = 464
Score = 42.7 bits (99), Expect = 2.4, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCTN-KNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS 1995
C YF+ G+C NC Y H + +A C + +G CA GD CR +H+
Sbjct: 54 CRYFMHGVCKEGDNCRYSHDLSTGQSAMVCRYYQRGCCAYGDHCRYEHT 102
>gi|344291452|ref|XP_003417449.1| PREDICTED: zinc finger CCCH domain-containing protein 8-like
[Loxodonta africana]
Length = 303
Score = 42.7 bits (99), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 9/105 (8%)
Query: 1916 PSKIAVCTKFLKGLCSNSDCKLTHKVIPERMPDCSYFLQGLCTNKN-CPYRH-VHVNPNA 1973
P + C K +G + + K I C YFL+ C + C + H +
Sbjct: 181 PKEKQQCVKMSQGFINQHTVERKGKQI------CKYFLERKCIKGDQCKFDHDAELEKKK 234
Query: 1974 STCEGFLKGYCADGDECRKKHS-YVCPTFKATGSCALGAKCRLHH 2017
C+ +++GYC G+ C H+ Y C + C G C+ H
Sbjct: 235 EMCKFYVQGYCNRGENCLYLHNEYPCKFYHTGAKCYQGEHCKFSH 279
>gi|302812797|ref|XP_002988085.1| hypothetical protein SELMODRAFT_127258 [Selaginella moellendorffii]
gi|300144191|gb|EFJ10877.1| hypothetical protein SELMODRAFT_127258 [Selaginella moellendorffii]
Length = 88
Score = 42.7 bits (99), Expect = 2.5, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 1926 LKGLCSN-SDCKLTHKVIPE-RMPDCSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLK- 1981
+KG CS C +H+ +P+ ++ C YFL C + CP+ H + C+ F+
Sbjct: 1 MKGRCSKGKSCTFSHEEVPDTKLYLCKYFLTRCCLKGDECPFSH---DTAKFPCKFFISL 57
Query: 1982 GYCADGDECRKKHSYV 1997
G+C DG++C+ H+ V
Sbjct: 58 GFCKDGEKCKFSHAPV 73
>gi|402891922|ref|XP_003909177.1| PREDICTED: zinc finger CCCH domain-containing protein 8 [Papio
anubis]
Length = 295
Score = 42.4 bits (98), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+ C + C + H + C+ +++GYC G+ C H+ Y C +
Sbjct: 201 CKYFLERKCIKGDQCKFDHDAEIEKKKEMCKFYVQGYCTRGENCLYLHNEYPCKFYHTGT 260
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 261 KCYQGEYCKFSH 272
>gi|334184645|ref|NP_001189661.1| zinc finger CCCH domain-containing protein 26 [Arabidopsis thaliana]
gi|330253670|gb|AEC08764.1| zinc finger CCCH domain-containing protein 26 [Arabidopsis thaliana]
Length = 467
Score = 42.4 bits (98), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 53/150 (35%), Gaps = 34/150 (22%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERM--PDCSY 1951
CQFF R G+C N C Y H T +G+ D +PER+ PDC
Sbjct: 50 CQFFLRTGQCGYGN-SCRYNHP------LTNLPQGIIYYRD------QLPERVGQPDCE- 95
Query: 1952 FLQGLC-TNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALG 2010
G C C Y H A + G ++ CP + TG C G
Sbjct: 96 --TGACKYGPTCKYHHPKDRNGAGPVLFNVLGLPM------RQGEKPCPYYMQTGLCRFG 147
Query: 2011 AKCRLHHPKSRSNGKKSRRSRKPKNTHGRY 2040
C+ HHP S +P N H Y
Sbjct: 148 VACKFHHPHPHS---------QPSNGHSAY 168
>gi|18403134|ref|NP_565758.1| zinc finger CCCH domain-containing protein 26 [Arabidopsis thaliana]
gi|62901127|sp|O48772.1|C3H26_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 26;
Short=AtC3H26; AltName: Full=Zinc finger CCCH
domain-containing protein ZFN2
gi|4928919|gb|AAD33770.1|AF138744_1 zinc finger protein 2 [Arabidopsis thaliana]
gi|2702272|gb|AAB91975.1| expressed protein [Arabidopsis thaliana]
gi|330253669|gb|AEC08763.1| zinc finger CCCH domain-containing protein 26 [Arabidopsis thaliana]
Length = 453
Score = 42.4 bits (98), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 53/150 (35%), Gaps = 34/150 (22%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDCKLTHKVIPERM--PDCSY 1951
CQFF R G+C N C Y H T +G+ D +PER+ PDC
Sbjct: 50 CQFFLRTGQCGYGN-SCRYNHP------LTNLPQGIIYYRD------QLPERVGQPDCE- 95
Query: 1952 FLQGLC-TNKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSCALG 2010
G C C Y H A + G ++ CP + TG C G
Sbjct: 96 --TGACKYGPTCKYHHPKDRNGAGPVLFNVLGLPM------RQGEKPCPYYMQTGLCRFG 147
Query: 2011 AKCRLHHPKSRSNGKKSRRSRKPKNTHGRY 2040
C+ HHP S +P N H Y
Sbjct: 148 VACKFHHPHPHS---------QPSNGHSAY 168
>gi|326517990|dbj|BAK07247.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 337
Score = 42.4 bits (98), Expect = 2.8, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 17/120 (14%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKVIPERMPDCSYFLQ-GLCTNKNCPYRHVHVNPNASTCEG 1978
VC +L+GLC ++ C H+ + MP C + C ++C +H CE
Sbjct: 148 VCQHWLRGLCKKAEPCSFLHQFDMDHMPVCHFHHAFRFCCAEDCNLKH-----EIQVCEM 202
Query: 1979 FLKGYCADGDECRKKH----------SYVCPTFKATGSCALGAKCRLHHPKSRSNGKKSR 2028
F G+C +G C H V F+ T + G + P+ + +K++
Sbjct: 203 FSVGFCPNGPNCNYMHVRLPGPPPPVQEVLQKFQQTNAYNCGPSSGTYQPRDNNCKQKAK 262
>gi|380817250|gb|AFE80499.1| zinc finger CCCH domain-containing protein 8 [Macaca mulatta]
Length = 295
Score = 42.4 bits (98), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+ C + C + H + C+ +++GYC G+ C H+ Y C +
Sbjct: 201 CKYFLERKCIKGDQCKFDHDAEIEKKKEMCKFYVQGYCTRGENCLYLHNEYPCKFYHTGT 260
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 261 KCYQGEYCKFSH 272
>gi|355729882|gb|AES10015.1| zinc finger CCCH-type containing 8 [Mustela putorius furo]
Length = 239
Score = 42.4 bits (98), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+ C + C + H + C+ +++GYC G+ C H+ Y C +
Sbjct: 156 CKYFLERKCIKGDQCKFDHDAEIEKKKEMCKFYVQGYCTRGENCLYLHNEYPCKFYHTGT 215
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 216 KCYQGEYCKFSH 227
>gi|62822306|gb|AAY14855.1| unknown [Homo sapiens]
Length = 266
Score = 42.4 bits (98), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+ C + C + H + C+ +++GYC G+ C H+ Y C +
Sbjct: 172 CKYFLERKCIKGDQCKFDHDAEIEKKKEMCKFYVQGYCTRGENCLYLHNEYPCKFYHTGT 231
Query: 2006 SCALGAKCRLHH 2017
C G C+ H
Sbjct: 232 KCYQGEYCKFSH 243
>gi|82914995|ref|XP_728928.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23485611|gb|EAA20493.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 581
Score = 42.4 bits (98), Expect = 3.0, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 26/100 (26%)
Query: 1921 VCTKFLKGLC-SNSDCKLTHKVIPERMPDCSYFLQ-GLCTNK---NCPYRHVHVNPN--- 1972
+C ++K +C N C H++I +R+P C +++ C +K +C +RH N N
Sbjct: 98 ICIHYIKNMCMKNLFCNYLHQLIYDRIPPCKNYIKYNYCADKIRGSCMFRHTLENTNMNY 157
Query: 1973 ------------------ASTCEGFLKGYCADGDECRKKH 1994
+ C +L G+C G CRK H
Sbjct: 158 YNENKEEHLDEALKFLHEKNICVNYLLGFCNLGYNCRKIH 197
>gi|145331437|ref|NP_001078077.1| zinc finger CCCH domain-containing protein 32 [Arabidopsis thaliana]
gi|330255804|gb|AEC10898.1| zinc finger CCCH domain-containing protein 32 [Arabidopsis thaliana]
Length = 442
Score = 42.4 bits (98), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 10/81 (12%)
Query: 1943 PER--MPDCSYFLQ-GLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVC 1998
PER PDC+Y+++ G+C N C Y H + ++ E ++ A G + C
Sbjct: 43 PERPGAPDCAYYMRTGVCGYGNRCRYNHPR---DRASVEATVR---ATGQYPERFGEPPC 96
Query: 1999 PTFKATGSCALGAKCRLHHPK 2019
+ TG+C GA C+ HHPK
Sbjct: 97 QFYLKTGTCKFGASCKFHHPK 117
>gi|390479178|ref|XP_002762352.2| PREDICTED: zinc finger CCCH domain-containing protein 4 [Callithrix
jacchus]
Length = 1293
Score = 42.4 bits (98), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 1949 CSYFLQGLCT-NKNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YF++G CT +C + H + + C+ ++ G+CA + C H + C + TG
Sbjct: 395 CKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTTG 454
Query: 2006 SC 2007
+C
Sbjct: 455 NC 456
>gi|3738297|gb|AAC63639.1| unknown protein [Arabidopsis thaliana]
Length = 553
Score = 42.4 bits (98), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 14/100 (14%)
Query: 1943 PER--MPDCSYFLQ-GLCTNKN-CPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVC 1998
PER PDC+Y+++ G+C N C Y H + ++ E ++ A G + C
Sbjct: 117 PERPGAPDCAYYMRTGVCGYGNRCRYNHPR---DRASVEATVR---ATGQYPERFGEPPC 170
Query: 1999 PTFKATGSCALGAKCRLHHPKSRSNGKKSRRSRKPKNTHG 2038
+ TG+C GA C+ HHPK+ S P N +G
Sbjct: 171 QFYLKTGTCKFGASCKFHHPKNAGG----SMSHVPLNIYG 206
>gi|341895197|gb|EGT51132.1| hypothetical protein CAEBREN_30953 [Caenorhabditis brenneri]
Length = 589
Score = 42.4 bits (98), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 12/89 (13%)
Query: 1886 RLARKRKYCQFFTRFGKCNKDNGKCPYIHDPS----KIAVCTKFLKGLCSNS-DCKLTHK 1940
R + + C+FF R G C +D +C Y H + +C + C C + H
Sbjct: 179 RFQTEHQICKFF-REGYC-RDGDQCSYSHQAEDSLRRPVLCNFYANSFCKKGLQCLMLHG 236
Query: 1941 VIPERMPDCSYFLQGLCTNKNCPYRHVHV 1969
P C F +GLC N C + HV +
Sbjct: 237 EFP-----CKQFHKGLCNNDQCRFSHVPL 260
>gi|341886227|gb|EGT42162.1| hypothetical protein CAEBREN_22772 [Caenorhabditis brenneri]
Length = 589
Score = 42.4 bits (98), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 12/89 (13%)
Query: 1886 RLARKRKYCQFFTRFGKCNKDNGKCPYIHDPS----KIAVCTKFLKGLCSNS-DCKLTHK 1940
R + + C+FF R G C +D +C Y H + +C + C C + H
Sbjct: 179 RFQTEHQICKFF-REGYC-RDGDQCSYSHQAEDSLRRPVLCNFYANSFCKKGLQCLMLHG 236
Query: 1941 VIPERMPDCSYFLQGLCTNKNCPYRHVHV 1969
P C F +GLC N C + HV +
Sbjct: 237 EFP-----CKQFHKGLCNNDQCRFSHVPL 260
>gi|58865750|ref|NP_001012090.1| zinc finger CCCH domain-containing protein 8 [Rattus norvegicus]
gi|50927709|gb|AAH79122.1| Zinc finger CCCH type containing 8 [Rattus norvegicus]
gi|149023249|gb|EDL80143.1| rCG27247 [Rattus norvegicus]
Length = 305
Score = 42.4 bits (98), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 9/79 (11%)
Query: 1921 VCTKFLKGLCSNSD-CKLTHKV-IPERMPDCSYFLQGLCTN-KNCPYRHVHVNPNASTCE 1977
VC FL+ C D CK H I ++ C Y++QG CT +NC Y H N C+
Sbjct: 210 VCKYFLERKCIKGDQCKFDHDAEIEKKKEMCKYYVQGYCTKGENCLYLH-----NEYPCK 264
Query: 1978 GFLKG-YCADGDECRKKHS 1995
+ G C GD C H+
Sbjct: 265 FYHTGTKCYQGDHCNFSHA 283
Score = 40.8 bits (94), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRH-VHVNPNASTCEGFLKGYCADGDECRKKHS-YVCPTFKATG 2005
C YFL+ C + C + H + C+ +++GYC G+ C H+ Y C +
Sbjct: 211 CKYFLERKCIKGDQCKFDHDAEIEKKKEMCKYYVQGYCTKGENCLYLHNEYPCKFYHTGT 270
Query: 2006 SCALGAKCRLHH 2017
C G C H
Sbjct: 271 KCYQGDHCNFSH 282
>gi|302781875|ref|XP_002972711.1| hypothetical protein SELMODRAFT_98217 [Selaginella moellendorffii]
gi|300159312|gb|EFJ25932.1| hypothetical protein SELMODRAFT_98217 [Selaginella moellendorffii]
Length = 104
Score = 42.0 bits (97), Expect = 3.6, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 1926 LKGLCSN-SDCKLTHKVIPE-RMPDCSYFLQGLCTNKN-CPYRHVHVNPNASTCEGFLK- 1981
+KG CS C +H+ +P+ ++ C YFL C + CP+ H + C+ F+
Sbjct: 1 MKGRCSKGKSCTFSHEEVPDTKLYLCKYFLTRCCLKGDECPFSH---DTAKFPCKFFISL 57
Query: 1982 GYCADGDECRKKHSYV 1997
G+C DG+ C+ H+ V
Sbjct: 58 GFCKDGERCKFSHASV 73
>gi|124810157|ref|XP_001348784.1| zinc finger protein, putative [Plasmodium falciparum 3D7]
gi|23497684|gb|AAN37223.1| zinc finger protein, putative [Plasmodium falciparum 3D7]
Length = 337
Score = 42.0 bits (97), Expect = 3.6, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 1890 KRKYCQFFTRFGKCNKDNGKCPYIHDP---SKIAVCTKFL-KGLCSNSDCKLTHKVIPER 1945
K++ C+FF + GKC N KC Y HD KI+ KFL KG C +C +H +
Sbjct: 70 KKETCKFFFKKGKC-IHNDKCTYSHDVIPIYKISKLCKFLVKGTCHKQNCIFSHDY---Q 125
Query: 1946 MPDC-SYFLQGLCTNKNCPYRHVHVNPNASTCEGFLK 1981
+ C + + C N C ++HV ++ + + + + K
Sbjct: 126 LFYCRNNVIYNSCHNPACKFKHVKIDNSINNADEYNK 162
>gi|417401637|gb|JAA47695.1| Putative e3 ubiquitin-protein ligase makorin-1 isoform 5 [Desmodus
rotundus]
Length = 478
Score = 42.0 bits (97), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 1949 CSYFLQGLCTN-KNCPYRH-VHVNPNASTCEGFLKGYCADGDECRKKH 1994
C YF+ G+C NC Y H + +P C+ F +G+C GD CR +H
Sbjct: 55 CRYFMHGVCKEGDNCRYSHDLSDSPYGVVCKYFQRGHCIYGDRCRYEH 102
>gi|449531215|ref|XP_004172583.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like,
partial [Cucumis sativus]
Length = 205
Score = 42.0 bits (97), Expect = 3.8, Method: Composition-based stats.
Identities = 35/132 (26%), Positives = 53/132 (40%), Gaps = 25/132 (18%)
Query: 1894 CQFFTRFGKCNKDNGKCPYIHDPSK-IAVCTKFLKGLCSNSDCKLTHKVIPERM--PDCS 1950
C ++ R G C + C + H P++ +A+ T +KG PER+ P+C
Sbjct: 23 CSYYIRTGLC-RFGATCRFNHPPNRELAIATARMKG------------EFPERIGQPECQ 69
Query: 1951 YFLQ-GLCT-NKNCPYRHVHVNPN-ASTCEGFLKGYCADGDECRKKHSYVCPTFKATGSC 2007
Y+L+ G C C + H A + GY E C + TG C
Sbjct: 70 YYLKTGTCKFGATCKFHHPRDKAGIAGRVALNILGYPLRPSETE------CAYYLRTGQC 123
Query: 2008 ALGAKCRLHHPK 2019
G C+ HHP+
Sbjct: 124 KFGNTCKFHHPQ 135
>gi|410951738|ref|XP_003982550.1| PREDICTED: probable E3 ubiquitin-protein ligase makorin-2 [Felis
catus]
Length = 416
Score = 42.0 bits (97), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 1949 CSYFLQGLCTNKN-CPYRHVHVNPNAST-CEGFLKGYCADGDECRKKHS 1995
C YF+ G+C N C + H N ST C+ + KGYCA G CR H+
Sbjct: 8 CRYFMHGVCREGNQCLFSHDLANSKPSTICKYYQKGYCAYGTRCRYDHT 56
>gi|224285149|gb|ACN40302.1| unknown [Picea sitchensis]
Length = 468
Score = 42.0 bits (97), Expect = 4.2, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 1943 PER--MPDCSYFLQ-GLCT-NKNCPYRHVHVNPNASTCEGFLKGYCADGDECRKKHSYVC 1998
PER PDC+Y+++ GLC +C + H PN + G+ + C
Sbjct: 61 PERPGEPDCTYYMRTGLCGFGMSCRFNH---PPNRKQAAAAARN---KGEYPERLGQPEC 114
Query: 1999 PTFKATGSCALGAKCRLHHPKSRS 2022
+ TGSC GA C+ HHP+ ++
Sbjct: 115 QYYLKTGSCKFGATCKFHHPRDKA 138
>gi|124506685|ref|XP_001351940.1| conserved Plasmodium protein, unknown function [Plasmodium falciparum
3D7]
gi|23504967|emb|CAD51751.1| conserved Plasmodium protein, unknown function [Plasmodium falciparum
3D7]
Length = 843
Score = 42.0 bits (97), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 49/119 (41%), Gaps = 28/119 (23%)
Query: 1884 RLRLARKRKYCQFFTRFGKCNKDNGKCPYIHDPSKIAVCTKFLKGLCSNSDC-KLTHKVI 1942
R L K K C ++ + GKC + C Y H +++ + L LC S C KL
Sbjct: 89 RRILFYKTKICPWYIK-GKCER-RKTCLYAHAQNEL----RELPNLCKTSLCPKLK---- 138
Query: 1943 PERMPDCSYFLQGLCTNKNCPYRHVHVNPNAS-------TCEGFLKGYCADGDECRKKH 1994
+ LC +K C Y H ++ A+ CE F+KG C G CR H
Sbjct: 139 ----------INELCNDKKCKYAHTNIELRATENLYKTALCESFIKGKCFSGQFCRYAH 187
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.311 0.127 0.364
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,185,959,316
Number of Sequences: 23463169
Number of extensions: 1441051096
Number of successful extensions: 3320830
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 367
Number of HSP's successfully gapped in prelim test: 2428
Number of HSP's that attempted gapping in prelim test: 3294741
Number of HSP's gapped (non-prelim): 15956
length of query: 2132
length of database: 8,064,228,071
effective HSP length: 159
effective length of query: 1973
effective length of database: 8,628,551,496
effective search space: 17024132101608
effective search space used: 17024132101608
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 85 (37.4 bits)