BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039604
(373 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255538662|ref|XP_002510396.1| DNA-3-methyladenine glycosylase, putative [Ricinus communis]
gi|223551097|gb|EEF52583.1| DNA-3-methyladenine glycosylase, putative [Ricinus communis]
Length = 369
Score = 502 bits (1293), Expect = e-140, Method: Compositional matrix adjust.
Identities = 246/310 (79%), Positives = 269/310 (86%), Gaps = 18/310 (5%)
Query: 57 TSSPPSKIP-LRPRKIRKLSPDNGVDQASSSQPTESSKATSAKSTKSRAIQQQQQTLTVP 115
T++PP+KIP RPRK+RKLSP+ ++AKSTK++ Q + + P
Sbjct: 71 TATPPAKIPPSRPRKLRKLSPE-----------------SAAKSTKTKTPQPRALAVAPP 113
Query: 116 RIIARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAF 175
RIIAR LS EGEVE AIRHLR AD L+SLID+HPPPTFD+FHTPFLALTRSILYQQLAF
Sbjct: 114 RIIARSLSCEGEVENAIRHLREADPLLSSLIDLHPPPTFDTFHTPFLALTRSILYQQLAF 173
Query: 176 KAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSD 235
KAGTSIYTRFI+LCGGEAGVVP+TVLALTPQQLRQIGVSGRKASYLHDLARKY NGILSD
Sbjct: 174 KAGTSIYTRFISLCGGEAGVVPDTVLALTPQQLRQIGVSGRKASYLHDLARKYHNGILSD 233
Query: 236 SAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEEL 295
SAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLY+LE+L
Sbjct: 234 SAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYNLEDL 293
Query: 296 PRPSQMDQLCEKWRPYRSVASWYLWRFVEAKGAPSSAAAVAAGAALPQPQQEEQQQPQLL 355
PRPSQMDQLCEKWRPYRSVASWYLWRFVEAKG+PSSA AVA GAAL Q QE+ QQPQLL
Sbjct: 294 PRPSQMDQLCEKWRPYRSVASWYLWRFVEAKGSPSSAVAVATGAALTQQHQEDHQQPQLL 353
Query: 356 DQINSLINIG 365
D INS++N+G
Sbjct: 354 DPINSILNLG 363
>gi|356510199|ref|XP_003523827.1| PREDICTED: probable DNA-3-methyladenine glycosylase 2-like [Glycine
max]
Length = 374
Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust.
Identities = 258/389 (66%), Positives = 285/389 (73%), Gaps = 46/389 (11%)
Query: 1 MVEQTQSQTQNQPEPQPEPETQPPPNQDSTTALAVIPVQTETANNATITHA--NVTPQTS 58
M EQT Q Q+ EPQP P P T + AT+ NV T+
Sbjct: 1 MGEQTLGQAQSLIEPQPLPA----------------PSSTAVPDGATVDSELNNVPRPTT 44
Query: 59 SPPSKIPLRPRKIRKLSPD--NGVDQASSSQPTESSKATSAKSTKSRAIQQQQQTLTVPR 116
SP +KIPLRPRKIRK+SPD Q + +P ++ + K+ RA+ VPR
Sbjct: 45 SPATKIPLRPRKIRKVSPDPSTSESQTETPKPAKTGGRNTTKAAPPRALT------VVPR 98
Query: 117 IIARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFK 176
I+AR LS +GEVE A+R+LRNAD L+ LIDIH PPTFD+FHTPFLALTRSILYQQLA+K
Sbjct: 99 IVARSLSCDGEVEIALRYLRNADPVLSPLIDIHQPPTFDNFHTPFLALTRSILYQQLAYK 158
Query: 177 AGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDS 236
AGTSIYTRFIALCGGE GVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDS
Sbjct: 159 AGTSIYTRFIALCGGENGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDS 218
Query: 237 AIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELP 296
AIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLY+LE+LP
Sbjct: 219 AIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYNLEDLP 278
Query: 297 RPSQMDQLCEKWRPYRSVASWYLWRFVEAKGAPSSAAAVAAGAAL--------------- 341
RPSQMDQLC+KWRPYRSVASWY+WRFVEAKG PSSA AVA GA L
Sbjct: 279 RPSQMDQLCDKWRPYRSVASWYMWRFVEAKGTPSSAVAVATGAGLQQQQHHQHHHQHQQQ 338
Query: 342 -----PQPQQEEQQQPQLLDQINSLINIG 365
Q QQ+ QPQLLD INS+ N+G
Sbjct: 339 EQQQQQQQQQQHPPQPQLLDPINSMFNLG 367
>gi|225458267|ref|XP_002282344.1| PREDICTED: DNA-3-methyladenine glycosylase 1-like [Vitis vinifera]
Length = 363
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 248/374 (66%), Positives = 283/374 (75%), Gaps = 27/374 (7%)
Query: 1 MVEQTQSQTQNQPEPQPEPETQPPPNQDSTTALAVIPVQTETANNATITHANVTPQTSSP 60
M E Q+ + QP+ + T N TTA+ ++ TE A A P+ S
Sbjct: 2 MGEHAQTVPKLQPDNESATATS---NAADTTAIQIVSTSTELATIAP-------PENQSS 51
Query: 61 PSKIPLRPRKIRKLSPDNGVDQASSSQPTESSKATSAKSTKSRAIQQQQQTLTVPRIIAR 120
S IP RPRKIRK+SPDN S S+P SK T+ K K++ + Q+ VP ++AR
Sbjct: 52 ASNIPFRPRKIRKISPDN-----SESKPAGDSK-TAGKGAKNKLVPQR--VPAVPNMVAR 103
Query: 121 PLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTS 180
LS EGE+E A+RHLRNAD LA LID+HPPPTFDSFHTPFLALT+SILYQQLA+KAGTS
Sbjct: 104 ALSCEGEIEIALRHLRNADPHLAPLIDLHPPPTFDSFHTPFLALTKSILYQQLAYKAGTS 163
Query: 181 IYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVN 240
IYTRF+ LCGGEAGV+PETVLALTP QLRQIGVSGRKASYLHDLARKYQNGILSD+ I+
Sbjct: 164 IYTRFVGLCGGEAGVLPETVLALTPHQLRQIGVSGRKASYLHDLARKYQNGILSDTGIIT 223
Query: 241 MDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQ 300
MDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLP+NDLGVRKGVQLLY LEELPRPSQ
Sbjct: 224 MDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPVNDLGVRKGVQLLYGLEELPRPSQ 283
Query: 301 MDQLCEKWRPYRSVASWYLWRFVEAKGAPSSAAAVAAGAAL---------PQPQQEEQQQ 351
M+QLCEKWRPYRSVASWY+WRFVE KGAPSSAAAVA G +L Q Q++Q Q
Sbjct: 284 MEQLCEKWRPYRSVASWYIWRFVEGKGAPSSAAAVAGGPSLQQQQQQQEQQQQHQQQQHQ 343
Query: 352 PQLLDQINSLINIG 365
Q LD IN ++N+G
Sbjct: 344 QQFLDPINGILNLG 357
>gi|255644446|gb|ACU22727.1| unknown [Glycine max]
Length = 351
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 244/337 (72%), Positives = 269/337 (79%), Gaps = 20/337 (5%)
Query: 43 ANNATITHA---NVTPQTSSPPSKIPLRPRKIRKLSPDNGVDQASSSQPTESSKATSAKS 99
A +A H+ NV T+SP +KIPLRPRKIRK+SPD +A + T++K+
Sbjct: 14 APDAATAHSELNNVPQPTTSPATKIPLRPRKIRKVSPDPSTSEAPIKPAKPVGRNTTSKA 73
Query: 100 TKSRAIQQQQQTLTVPRIIARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHT 159
RA+ VPRI+AR LS +GEVE ++R+LRNAD L+ LIDIH PPTFD+FHT
Sbjct: 74 APPRALT------VVPRIVARSLSCDGEVEISLRYLRNADPLLSPLIDIHQPPTFDNFHT 127
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
PFLALTRSILYQQLAFKAGTSIYTRFI LCGGE GVVPETVLALTPQQLRQIGVSGRKAS
Sbjct: 128 PFLALTRSILYQQLAFKAGTSIYTRFIGLCGGENGVVPETVLALTPQQLRQIGVSGRKAS 187
Query: 220 YLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIND 279
YLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIND
Sbjct: 188 YLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIND 247
Query: 280 LGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAKGAPSSAAAVAAGA 339
LGVRKGVQLLY+LE+LPRPSQMDQLC+KWRPYRSVASWY+WRFVEAKG PSSA VA GA
Sbjct: 248 LGVRKGVQLLYNLEDLPRPSQMDQLCDKWRPYRSVASWYMWRFVEAKGTPSSAVTVATGA 307
Query: 340 AL-----------PQPQQEEQQQPQLLDQINSLINIG 365
L Q QQ+ QPQLLD INS+ N+G
Sbjct: 308 GLQQQRHHQHQQQEQQQQQHAPQPQLLDPINSMFNLG 344
>gi|356518850|ref|XP_003528090.1| PREDICTED: DNA-3-methyladenine glycosylase 1-like [Glycine max]
Length = 351
Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust.
Identities = 245/337 (72%), Positives = 270/337 (80%), Gaps = 20/337 (5%)
Query: 43 ANNATITHA--NVTPQ-TSSPPSKIPLRPRKIRKLSPDNGVDQASSSQPTESSKATSAKS 99
A +A H+ N PQ T+SP +KIPLRPRKIRK+SPD +A + T++K+
Sbjct: 14 APDAATAHSELNNVPQPTTSPATKIPLRPRKIRKVSPDPSTSEAPIKPAKPVGRNTTSKA 73
Query: 100 TKSRAIQQQQQTLTVPRIIARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHT 159
RA+ VPRI+AR LS +GEVE ++R+LRNAD L+ LIDIH PPTFD+FHT
Sbjct: 74 APPRALT------VVPRIVARSLSCDGEVEISLRYLRNADPLLSPLIDIHQPPTFDNFHT 127
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
PFLALTRSILYQQLAFKAGTSIYTRFI LCGGE GVVPETVLALTPQQLRQIGVSGRKAS
Sbjct: 128 PFLALTRSILYQQLAFKAGTSIYTRFIGLCGGENGVVPETVLALTPQQLRQIGVSGRKAS 187
Query: 220 YLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIND 279
YLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIND
Sbjct: 188 YLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIND 247
Query: 280 LGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAKGAPSSAAAVAAGA 339
LGVRKGVQLLY+LE+LPRPSQMDQLC+KWRPYRSVASWY+WRFVEAKG PSSA VA GA
Sbjct: 248 LGVRKGVQLLYNLEDLPRPSQMDQLCDKWRPYRSVASWYMWRFVEAKGTPSSAVTVATGA 307
Query: 340 AL-----------PQPQQEEQQQPQLLDQINSLINIG 365
L Q QQ+ QPQLLD INS+ N+G
Sbjct: 308 GLQQQRHHQHQQQEQQQQQHAPQPQLLDPINSMFNLG 344
>gi|224066215|ref|XP_002302029.1| predicted protein [Populus trichocarpa]
gi|222843755|gb|EEE81302.1| predicted protein [Populus trichocarpa]
Length = 381
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 237/325 (72%), Positives = 267/325 (82%), Gaps = 12/325 (3%)
Query: 53 VTPQTSSPPSKIPLRPRKIRKLSPDNGV---------DQASSSQPTESSKATSAKSTKSR 103
+ P +SPP+KIP RPRKIRKLSPD V Q S TE + T+ K+ +++
Sbjct: 51 IPPSITSPPAKIPSRPRKIRKLSPDAAVVTTVNDPNSTQTSIKNTTEPPRTTATKTPRTK 110
Query: 104 AIQQQQQTLTVPRIIARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLA 163
Q + PRI+AR L+ EGE+E AIRHLRNAD LASLIDI+PPPTFD+F TPFLA
Sbjct: 111 TAQHRAIVALAPRIMARSLTCEGELEIAIRHLRNADPLLASLIDIYPPPTFDTFPTPFLA 170
Query: 164 LTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHD 223
L RSILYQQLAFKAGTSIYTRFI+LCGGEAGV+PETVLALTPQQLRQIGVSGRKASYLHD
Sbjct: 171 LARSILYQQLAFKAGTSIYTRFISLCGGEAGVLPETVLALTPQQLRQIGVSGRKASYLHD 230
Query: 224 LARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVR 283
LARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDL VR
Sbjct: 231 LARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLQVR 290
Query: 284 KGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAKGAPSSAAAVAAGAAL-- 341
KG+Q+LY+L ELPRPSQMD LCEKWRPYRSVASWYLWRF E KG+PSSA A+A+ L
Sbjct: 291 KGLQVLYNLPELPRPSQMDHLCEKWRPYRSVASWYLWRFQEVKGSPSSAVALASSGNLTQ 350
Query: 342 -PQPQQEEQQQPQLLDQINSLINIG 365
Q +Q+ QQ+PQL+D INS++N+G
Sbjct: 351 QQQEEQQHQQEPQLIDPINSILNLG 375
>gi|297844924|ref|XP_002890343.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336185|gb|EFH66602.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1262
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 244/382 (63%), Positives = 282/382 (73%), Gaps = 19/382 (4%)
Query: 1 MVEQTQSQ--TQNQPEPQ-PEPETQ---PPPNQDSTTALAVIPVQTETANNATITHANVT 54
M EQ+ SQ TQ+Q PQ P+P+T PP + D+ A V ++ TI +T
Sbjct: 1 MGEQSPSQPSTQSQSRPQSPKPDTHNLIPPESTDACIDSA--GVSGSIVSSTTIDAGRIT 58
Query: 55 P--QTSSPPSKIPLRPRKIRKLSPDNGVDQASSSQPTESSKATSAKSTK---SRAIQQQQ 109
SSPPSKIPLRPRKIRKL+ D V SS+ TS +T + Q
Sbjct: 59 ELGNVSSPPSKIPLRPRKIRKLTLDGDVSGEDYKAEDISSQVTSPLATGKSPGKGKLSQS 118
Query: 110 QTLTVPRIIARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSIL 169
+ +TVPRI ARPL+ EGE+E AI +LRNAD LA+LID+HPPPTF+SF TPFLAL RSIL
Sbjct: 119 RVITVPRIQARPLTCEGELETAIHYLRNADPLLAALIDVHPPPTFESFKTPFLALIRSIL 178
Query: 170 YQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQ 229
YQQLA KAG SIYTRF+ALCGGE VVPETVLAL PQQLRQIGVSGRKASYLHDLARKYQ
Sbjct: 179 YQQLATKAGNSIYTRFVALCGGENVVVPETVLALNPQQLRQIGVSGRKASYLHDLARKYQ 238
Query: 230 NGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLL 289
NGILSDSAI+NMD+KSLFTMLTMVNGIGSWSVHMFMI SLHRPDVLP+NDLGVRKGVQ+L
Sbjct: 239 NGILSDSAILNMDEKSLFTMLTMVNGIGSWSVHMFMINSLHRPDVLPVNDLGVRKGVQML 298
Query: 290 YSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAKGAPSSAAAVAAGAALPQPQQEE- 348
Y L++LPRPSQM+Q C KWRPYRSV SWY+WR +E KG P+S AV GAA+ P E+
Sbjct: 299 YGLDDLPRPSQMEQHCAKWRPYRSVGSWYMWRLIEGKGTPTS--AVTPGAAMSLPPLEDI 356
Query: 349 ---QQQPQLLDQINSLINIGYN 367
QQ QL+D +NS+ +IGY
Sbjct: 357 QQEHQQQQLMDPLNSVFSIGYG 378
>gi|224082864|ref|XP_002306870.1| predicted protein [Populus trichocarpa]
gi|222856319|gb|EEE93866.1| predicted protein [Populus trichocarpa]
Length = 374
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 248/371 (66%), Positives = 286/371 (77%), Gaps = 9/371 (2%)
Query: 1 MVEQTQSQTQNQPEPQPEPETQPPPNQDSTTALAVIPVQTETANNATITHANVTPQTSSP 60
M EQT+ Q Q+QP + E+Q P ++ + T T V P +SP
Sbjct: 1 MGEQTKIQPQSQPV---QSESQALPQIEAQVQTQSLSQPFNTPTTTTSELTTVPPPITSP 57
Query: 61 PSKIPLRPRKIRKLSPDNGVDQASSSQPTESSKATSAKSTKSRAIQ------QQQQTLTV 114
P+KIP RPRKIRK+SP+ A+ + +S T+ ++ KS AI+ QQ +
Sbjct: 58 PAKIPSRPRKIRKVSPNAAATTANDPNSSPTSTTTTTETPKSPAIKTPRTKTSQQLVIAT 117
Query: 115 PRIIARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLA 174
PRI+AR L+ EGE+E AI +LRNAD LASLIDI+ PP+FD+F TPFLAL RSILYQQLA
Sbjct: 118 PRIVARSLTCEGELEYAIHYLRNADPLLASLIDIYQPPSFDTFPTPFLALARSILYQQLA 177
Query: 175 FKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILS 234
FKAG+SIYTRFI+LCGGEAGV+PETVLALTPQQLRQ GVSGRKASYLHDLARKYQNGILS
Sbjct: 178 FKAGSSIYTRFISLCGGEAGVLPETVLALTPQQLRQFGVSGRKASYLHDLARKYQNGILS 237
Query: 235 DSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEE 294
DSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDL VRKGVQLLY+L E
Sbjct: 238 DSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLQVRKGVQLLYNLPE 297
Query: 295 LPRPSQMDQLCEKWRPYRSVASWYLWRFVEAKGAPSSAAAVAAGAALPQPQQEEQQQPQL 354
LPRPSQMDQLCEKWRPYRSVASWYLWR E+KG+PSS AV+ L Q QQE+QQQPQL
Sbjct: 298 LPRPSQMDQLCEKWRPYRSVASWYLWRLQESKGSPSSVIAVSTSGNLTQQQQEDQQQPQL 357
Query: 355 LDQINSLINIG 365
+D INS++N+G
Sbjct: 358 IDPINSILNLG 368
>gi|302142502|emb|CBI19705.3| unnamed protein product [Vitis vinifera]
Length = 351
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 224/332 (67%), Positives = 247/332 (74%), Gaps = 41/332 (12%)
Query: 8 QTQNQPEPQPEPET-QPPPNQDSTTALAVIPVQTETANNATITHANVTPQTSSPPSKIPL 66
Q P+ QP+ E+ N TTA+ ++ TE A A P+ S S IP
Sbjct: 37 HAQTVPKLQPDNESATATSNAADTTAIQIVSTSTELATIAP-------PENQSSASNIPF 89
Query: 67 RPRKIRKLSPDNGVDQASSSQPTESSKATSAKSTKSRAIQQQQQTLTVPRIIARPLSSEG 126
RPRKIRK+SPDN S S+P SK + +G
Sbjct: 90 RPRKIRKISPDN-----SESKPAGDSKT----------------------------AGKG 116
Query: 127 EVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFI 186
E+E A+RHLRNAD LA LID+HPPPTFDSFHTPFLALT+SILYQQLA+KAGTSIYTRF+
Sbjct: 117 EIEIALRHLRNADPHLAPLIDLHPPPTFDSFHTPFLALTKSILYQQLAYKAGTSIYTRFV 176
Query: 187 ALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSL 246
LCGGEAGV+PETVLALTP QLRQIGVSGRKASYLHDLARKYQNGILSD+ I+ MDDKSL
Sbjct: 177 GLCGGEAGVLPETVLALTPHQLRQIGVSGRKASYLHDLARKYQNGILSDTGIITMDDKSL 236
Query: 247 FTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCE 306
FTMLTMVNGIGSWSVHMFMIFSLHRPDVLP+NDLGVRKGVQLLY LEELPRPSQM+QLCE
Sbjct: 237 FTMLTMVNGIGSWSVHMFMIFSLHRPDVLPVNDLGVRKGVQLLYGLEELPRPSQMEQLCE 296
Query: 307 KWRPYRSVASWYLWRFVEAKGAPSSAAAVAAG 338
KWRPYRSVASWY+WRFVE KGAPSSAAAVA G
Sbjct: 297 KWRPYRSVASWYIWRFVEGKGAPSSAAAVAGG 328
>gi|8778423|gb|AAF79431.1|AC025808_13 F18O14.25 [Arabidopsis thaliana]
Length = 1314
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 246/384 (64%), Positives = 286/384 (74%), Gaps = 22/384 (5%)
Query: 1 MVEQTQSQ--TQNQPEPQ-PEPETQ---PPPNQDSTTALAVIPVQTETANNATITHANVT 54
M EQ+ SQ TQ Q PQ P+P+T PP + D L V ++ TI +T
Sbjct: 1 MGEQSPSQPSTQCQSHPQSPKPDTHNLIPPESTDE--CLDSAGVSGSIVSSTTIDARRIT 58
Query: 55 P--QTSSPPSKIPLRPRKIRKLSPDNGV-------DQASSSQPTESSKATSAKSTKSRAI 105
SSPPSKIPLRPRKIRKL+ D V + SSSQ S AT KS +
Sbjct: 59 ELGNVSSPPSKIPLRPRKIRKLTLDGDVSGEDYKAEDISSSQ-VNSPLATDGKS-PGKGK 116
Query: 106 QQQQQTLTVPRIIARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALT 165
+ +TVPRI ARPL+ EGE+E AI +LRNAD LA+LID+HPPPTF+SF TPFLAL
Sbjct: 117 LSHLRAITVPRIQARPLTCEGELETAIHYLRNADPLLAALIDVHPPPTFESFKTPFLALI 176
Query: 166 RSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLA 225
R+ILYQQLA KAG SIYTRF++LCGGE VVPETVL+L PQQLRQIGVSGRKASYLHDLA
Sbjct: 177 RNILYQQLAMKAGNSIYTRFVSLCGGENLVVPETVLSLNPQQLRQIGVSGRKASYLHDLA 236
Query: 226 RKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKG 285
RKYQNGILSDSAI+NMD+KSLFTMLTMVNGIGSWSVHMFMI SLHRPDVLP+NDLGVRKG
Sbjct: 237 RKYQNGILSDSAILNMDEKSLFTMLTMVNGIGSWSVHMFMINSLHRPDVLPVNDLGVRKG 296
Query: 286 VQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAKGAPSSAAAVAAGAALP--Q 343
VQLLY L++LPRPSQM+Q C KWRPYRSV SWY+WR +EAK + S++AAVAAG +LP +
Sbjct: 297 VQLLYGLDDLPRPSQMEQHCAKWRPYRSVGSWYMWRLIEAK-STSTSAAVAAGVSLPPLE 355
Query: 344 PQQEEQQQPQLLDQINSLINIGYN 367
Q+E QQ QL+D +N + +IGY
Sbjct: 356 DIQQEHQQQQLMDPLNGVFSIGYG 379
>gi|297839395|ref|XP_002887579.1| hypothetical protein ARALYDRAFT_476667 [Arabidopsis lyrata subsp.
lyrata]
gi|297333420|gb|EFH63838.1| hypothetical protein ARALYDRAFT_476667 [Arabidopsis lyrata subsp.
lyrata]
Length = 389
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 246/376 (65%), Positives = 285/376 (75%), Gaps = 17/376 (4%)
Query: 5 TQSQTQNQPE-PQPEPETQPPPNQDSTTALAVIPVQTETANNATITHANVTP--QTSSPP 61
+Q+ QNQPE P PE PP + + + V + TI VT SSPP
Sbjct: 11 SQTHPQNQPESPNPETPNPIPPGTNDDDSASSAGVSGSIVSLTTIEAPRVTELGNVSSPP 70
Query: 62 SKIPLRPRKIRKLSPDNGVD-QASSSQPTESSKATSAK-STKSRAIQQQQQTLTVPRIIA 119
SKIPLRPRKIRKLSPD+ P + AT++K + KS+ Q + +TVPRI A
Sbjct: 71 SKIPLRPRKIRKLSPDDDASGNGDGFNPEHNLLATTSKPAVKSKL--SQSRCVTVPRIHA 128
Query: 120 RPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGT 179
R L+ EGE+EAA+ HLR+ D LASLIDIHPPPTF++FHTPFLAL RSILYQQLA KAG
Sbjct: 129 RSLTCEGELEAALHHLRSVDPLLASLIDIHPPPTFETFHTPFLALIRSILYQQLAAKAGN 188
Query: 180 SIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIV 239
SIYTRF+ALCGGE GVVPE VL LTPQQLRQIGVSGRKASYLHDLARKYQNGILSDS IV
Sbjct: 189 SIYTRFVALCGGENGVVPENVLPLTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSGIV 248
Query: 240 NMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPS 299
NMD+KSLFTMLTMVNGIGSWSVHMFMI SLHRPDVLP+NDLGVRKGVQ+L ++E+LPRPS
Sbjct: 249 NMDEKSLFTMLTMVNGIGSWSVHMFMINSLHRPDVLPVNDLGVRKGVQMLNAMEDLPRPS 308
Query: 300 QMDQLCEKWRPYRSVASWYLWRFVEAKGAPSSAAAVAAGAALPQPQQEE----------Q 349
+M+QLCEKWRPYRSVASWY+WR +E+KG P +AAAV AGAAL PQ E+ Q
Sbjct: 309 KMEQLCEKWRPYRSVASWYMWRLIESKGTPPNAAAVTAGAALSFPQLEDIQQQQEEQHHQ 368
Query: 350 QQPQLLDQINSLINIG 365
QQPQL+D +N++ +IG
Sbjct: 369 QQPQLMDPLNNVFSIG 384
>gi|42572113|ref|NP_974147.1| DNA-3-methyladenine glycosylase II [Arabidopsis thaliana]
gi|332197569|gb|AEE35690.1| DNA-3-methyladenine glycosylase II [Arabidopsis thaliana]
Length = 394
Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust.
Identities = 242/378 (64%), Positives = 280/378 (74%), Gaps = 19/378 (5%)
Query: 11 NQPE-PQPEPETQPPPNQDSTTALAVIPVQTETANNATITHANVTP--QTSSPPSKIPLR 67
NQPE P E PP + + + V ++ TI VT SSPP+KIPLR
Sbjct: 17 NQPESPNHETPNPIPPETNDDDSASSAGVSGSIVSSTTIEAPQVTELGNVSSPPTKIPLR 76
Query: 68 PRKIRKLSPDNGVDQASSSQPTESSKATSAKSTKSRAIQQQQQTLTVPRIIARPLSSEGE 127
PRKIRKLSPD+ + + S T+ +TKS+ Q +T+TVPRI AR L+ EGE
Sbjct: 77 PRKIRKLSPDDDASDGFNPEHNLSQMTTTKPATKSKL--SQSRTVTVPRIQARSLTCEGE 134
Query: 128 VEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIA 187
+EAA+ HLR+ D LASLIDIHPPPTF++F TPFLAL RSILYQQLA KAG SIYTRF+A
Sbjct: 135 LEAALHHLRSVDPLLASLIDIHPPPTFETFQTPFLALIRSILYQQLAAKAGNSIYTRFVA 194
Query: 188 LCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLF 247
LCGGE GVVPE VL LTPQQLRQIGVSGRKASYLHDLARKYQNGILSDS IVNMD+KSLF
Sbjct: 195 LCGGENGVVPENVLPLTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSGIVNMDEKSLF 254
Query: 248 TMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEK 307
TMLTMVNGIGSWSVHMFMI SLHRPDVLP+NDLGVRKGVQ+L +E+LPRPS+M+QLCEK
Sbjct: 255 TMLTMVNGIGSWSVHMFMINSLHRPDVLPVNDLGVRKGVQMLNGMEDLPRPSKMEQLCEK 314
Query: 308 WRPYRSVASWYLWRFVEAKGAPSSAAAVAAGAALPQPQQEE--------------QQQPQ 353
WRPYRSVASWYLWR +E+K P +AAA AGAAL PQ E+ QQQPQ
Sbjct: 315 WRPYRSVASWYLWRLIESKNTPPNAAAATAGAALSFPQLEDIQQQEQEQQHQQHQQQQPQ 374
Query: 354 LLDQINSLINIGYNDFHI 371
L+D +N++ +IGY+ H
Sbjct: 375 LMDPLNNVFSIGYSQLHC 392
>gi|18394744|ref|NP_564085.1| DNA glycosylase domain-containing protein [Arabidopsis thaliana]
gi|111074400|gb|ABH04573.1| At1g19480 [Arabidopsis thaliana]
gi|332191735|gb|AEE29856.1| DNA glycosylase domain-containing protein [Arabidopsis thaliana]
Length = 382
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 245/382 (64%), Positives = 285/382 (74%), Gaps = 22/382 (5%)
Query: 1 MVEQTQSQ--TQNQPEPQ-PEPETQ---PPPNQDSTTALAVIPVQTETANNATITHANVT 54
M EQ+ SQ TQ Q PQ P+P+T PP + D L V ++ TI +T
Sbjct: 1 MGEQSPSQPSTQCQSHPQSPKPDTHNLIPPESTDE--CLDSAGVSGSIVSSTTIDARRIT 58
Query: 55 P--QTSSPPSKIPLRPRKIRKLSPDNGV-------DQASSSQPTESSKATSAKSTKSRAI 105
SSPPSKIPLRPRKIRKL+ D V + SSSQ S AT KS +
Sbjct: 59 ELGNVSSPPSKIPLRPRKIRKLTLDGDVSGEDYKAEDISSSQ-VNSPLATDGKS-PGKGK 116
Query: 106 QQQQQTLTVPRIIARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALT 165
+ +TVPRI ARPL+ EGE+E AI +LRNAD LA+LID+HPPPTF+SF TPFLAL
Sbjct: 117 LSHLRAITVPRIQARPLTCEGELETAIHYLRNADPLLAALIDVHPPPTFESFKTPFLALI 176
Query: 166 RSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLA 225
R+ILYQQLA KAG SIYTRF++LCGGE VVPETVL+L PQQLRQIGVSGRKASYLHDLA
Sbjct: 177 RNILYQQLAMKAGNSIYTRFVSLCGGENLVVPETVLSLNPQQLRQIGVSGRKASYLHDLA 236
Query: 226 RKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKG 285
RKYQNGILSDSAI+NMD+KSLFTMLTMVNGIGSWSVHMFMI SLHRPDVLP+NDLGVRKG
Sbjct: 237 RKYQNGILSDSAILNMDEKSLFTMLTMVNGIGSWSVHMFMINSLHRPDVLPVNDLGVRKG 296
Query: 286 VQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAKGAPSSAAAVAAGAALP--Q 343
VQLLY L++LPRPSQM+Q C KWRPYRSV SWY+WR +EAK + S++AAVAAG +LP +
Sbjct: 297 VQLLYGLDDLPRPSQMEQHCAKWRPYRSVGSWYMWRLIEAK-STSTSAAVAAGVSLPPLE 355
Query: 344 PQQEEQQQPQLLDQINSLINIG 365
Q+E QQ QL+D +N + +IG
Sbjct: 356 DIQQEHQQQQLMDPLNGVFSIG 377
>gi|145323948|ref|NP_001077563.1| DNA glycosylase domain-containing protein [Arabidopsis thaliana]
gi|62319794|dbj|BAD93800.1| hypothetical protein [Arabidopsis thaliana]
gi|110736462|dbj|BAF00199.1| hypothetical protein [Arabidopsis thaliana]
gi|332191736|gb|AEE29857.1| DNA glycosylase domain-containing protein [Arabidopsis thaliana]
Length = 377
Score = 443 bits (1139), Expect = e-122, Method: Compositional matrix adjust.
Identities = 245/382 (64%), Positives = 284/382 (74%), Gaps = 22/382 (5%)
Query: 1 MVEQTQSQ--TQNQPEPQ-PEPETQ---PPPNQDSTTALAVIPVQTETANNATITHANVT 54
M EQ+ SQ TQ Q PQ P+P+T PP + D L V ++ TI +T
Sbjct: 1 MGEQSPSQPSTQCQSHPQSPKPDTHNLIPPESTDE--CLDSAGVSGSIVSSTTIDARRIT 58
Query: 55 P--QTSSPPSKIPLRPRKIRKLSPDNGV-------DQASSSQPTESSKATSAKSTKSRAI 105
SSPPSKIPLRPRKIRKL+ D V + SSSQ S AT KS +
Sbjct: 59 ELGNVSSPPSKIPLRPRKIRKLTLDGDVSGEDYKAEDISSSQ-VNSPLATDGKS-PGKGK 116
Query: 106 QQQQQTLTVPRIIARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALT 165
+ +TVPRI ARPL+ EGE+E AI +LRNAD LA+LID+HPPPTF+SF TPFLAL
Sbjct: 117 LSHLRAITVPRIQARPLTCEGELETAIHYLRNADPLLAALIDVHPPPTFESFKTPFLALI 176
Query: 166 RSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLA 225
R+ILYQQLA KAG SIYTRF++LCGGE VVPETVL+L PQQLRQIGVSGRKASYLHDLA
Sbjct: 177 RNILYQQLAMKAGNSIYTRFVSLCGGENLVVPETVLSLNPQQLRQIGVSGRKASYLHDLA 236
Query: 226 RKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKG 285
RKYQNGILSDSAI+NMD+KSLFTMLTMVNGIGSWSVHMFMI SLHRPDVLP+NDLGVRKG
Sbjct: 237 RKYQNGILSDSAILNMDEKSLFTMLTMVNGIGSWSVHMFMINSLHRPDVLPVNDLGVRKG 296
Query: 286 VQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAKGAPSSAAAVAAGAALP--Q 343
VQLLY L++LPRPSQM+Q C KWRPYRSV SWY+WR +EAK S++AAVAAG +LP +
Sbjct: 297 VQLLYGLDDLPRPSQMEQHCAKWRPYRSVGSWYMWRLIEAKST-STSAAVAAGVSLPPLE 355
Query: 344 PQQEEQQQPQLLDQINSLINIG 365
Q+E QQ QL+D +N + +IG
Sbjct: 356 DIQQEHQQQQLMDPLNGVFSIG 377
>gi|21593178|gb|AAM65127.1| unknown [Arabidopsis thaliana]
Length = 382
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 240/380 (63%), Positives = 286/380 (75%), Gaps = 18/380 (4%)
Query: 1 MVEQTQSQ--TQNQPEPQ-PEPETQ---PPPNQDSTTALAVIPVQTETANNATITHANVT 54
M EQ+ SQ TQ Q PQ P+P+T PP + D L V ++ TI +T
Sbjct: 1 MGEQSPSQPSTQCQSHPQSPKPDTHNLIPPESTDE--CLDSAGVSGSIVSSTTIDARRIT 58
Query: 55 P--QTSSPPSKIPLRPRKIRKLSPDNGVD-QASSSQPTESSKATSAKSTKSRAIQQQQ-- 109
SSPPSKIPLRPRKIRKL+ D V + ++ SS+ S ST ++ + +
Sbjct: 59 ELGNVSSPPSKIPLRPRKIRKLTLDGDVSGEDYKAEDISSSQVNSPLSTDGKSPGKGKLS 118
Query: 110 --QTLTVPRIIARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRS 167
+ +TVPRI ARPL+ EGE+E AI +LRNAD LA+LID+HPPPTF+SF TPFLAL R+
Sbjct: 119 HLRAITVPRIQARPLTCEGELETAIHYLRNADPLLAALIDVHPPPTFESFKTPFLALIRN 178
Query: 168 ILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARK 227
ILYQQLA KAG SIYTRF++LCGGE VVPETVL+L PQQLRQIGVSGRKASYLHDLARK
Sbjct: 179 ILYQQLAMKAGNSIYTRFVSLCGGENLVVPETVLSLNPQQLRQIGVSGRKASYLHDLARK 238
Query: 228 YQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQ 287
YQNGILSDSAI+NMD+KSLFTMLTMVNGIGSWSVHMFMI SLHRPDVLP+NDLGVRKGVQ
Sbjct: 239 YQNGILSDSAILNMDEKSLFTMLTMVNGIGSWSVHMFMINSLHRPDVLPVNDLGVRKGVQ 298
Query: 288 LLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAKGAPSSAAAVAAGAALP--QPQ 345
LLY L++LPRPSQM+Q C KWRPYRSV SWY+WR +EAK + S++A VAAG +LP +
Sbjct: 299 LLYGLDDLPRPSQMEQHCAKWRPYRSVGSWYMWRLIEAK-STSTSAXVAAGVSLPPLEDI 357
Query: 346 QEEQQQPQLLDQINSLINIG 365
Q+E QQ QL+D +N + +IG
Sbjct: 358 QQEHQQQQLMDPLNGVFSIG 377
>gi|10092274|gb|AAG12687.1|AC025814_11 3-methyladenine DNA glycosylase, putative; 31680-30045 [Arabidopsis
thaliana]
Length = 428
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 240/372 (64%), Positives = 277/372 (74%), Gaps = 19/372 (5%)
Query: 11 NQPE-PQPEPETQPPPNQDSTTALAVIPVQTETANNATITHANVTP--QTSSPPSKIPLR 67
NQPE P E PP + + + V ++ TI VT SSPP+KIPLR
Sbjct: 17 NQPESPNHETPNPIPPETNDDDSASSAGVSGSIVSSTTIEAPQVTELGNVSSPPTKIPLR 76
Query: 68 PRKIRKLSPDNGVDQASSSQPTESSKATSAKSTKSRAIQQQQQTLTVPRIIARPLSSEGE 127
PRKIRKLSPD+ + + S T+ +TKS+ Q +T+TVPRI AR L+ EGE
Sbjct: 77 PRKIRKLSPDDDASDGFNPEHNLSQMTTTKPATKSKL--SQSRTVTVPRIQARSLTCEGE 134
Query: 128 VEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIA 187
+EAA+ HLR+ D LASLIDIHPPPTF++F TPFLAL RSILYQQLA KAG SIYTRF+A
Sbjct: 135 LEAALHHLRSVDPLLASLIDIHPPPTFETFQTPFLALIRSILYQQLAAKAGNSIYTRFVA 194
Query: 188 LCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLF 247
LCGGE GVVPE VL LTPQQLRQIGVSGRKASYLHDLARKYQNGILSDS IVNMD+KSLF
Sbjct: 195 LCGGENGVVPENVLPLTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSGIVNMDEKSLF 254
Query: 248 TMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEK 307
TMLTMVNGIGSWSVHMFMI SLHRPDVLP+NDLGVRKGVQ+L +E+LPRPS+M+QLCEK
Sbjct: 255 TMLTMVNGIGSWSVHMFMINSLHRPDVLPVNDLGVRKGVQMLNGMEDLPRPSKMEQLCEK 314
Query: 308 WRPYRSVASWYLWRFVEAKGAPSSAAAVAAGAALPQPQQEE--------------QQQPQ 353
WRPYRSVASWYLWR +E+K P +AAA AGAAL PQ E+ QQQPQ
Sbjct: 315 WRPYRSVASWYLWRLIESKNTPPNAAAATAGAALSFPQLEDIQQQEQEQQHQQHQQQQPQ 374
Query: 354 LLDQINSLINIG 365
L+D +N++ +IG
Sbjct: 375 LMDPLNNVFSIG 386
>gi|18410802|ref|NP_565105.1| DNA-3-methyladenine glycosylase II [Arabidopsis thaliana]
gi|13430602|gb|AAK25923.1|AF360213_1 putative 3-methyladenine DNA glycosylase [Arabidopsis thaliana]
gi|15293165|gb|AAK93693.1| putative 3-methyladenine DNA glycosylase [Arabidopsis thaliana]
gi|332197570|gb|AEE35691.1| DNA-3-methyladenine glycosylase II [Arabidopsis thaliana]
Length = 391
Score = 439 bits (1129), Expect = e-121, Method: Compositional matrix adjust.
Identities = 240/372 (64%), Positives = 277/372 (74%), Gaps = 19/372 (5%)
Query: 11 NQPE-PQPEPETQPPPNQDSTTALAVIPVQTETANNATITHANVTP--QTSSPPSKIPLR 67
NQPE P E PP + + + V ++ TI VT SSPP+KIPLR
Sbjct: 17 NQPESPNHETPNPIPPETNDDDSASSAGVSGSIVSSTTIEAPQVTELGNVSSPPTKIPLR 76
Query: 68 PRKIRKLSPDNGVDQASSSQPTESSKATSAKSTKSRAIQQQQQTLTVPRIIARPLSSEGE 127
PRKIRKLSPD+ + + S T+ +TKS+ Q +T+TVPRI AR L+ EGE
Sbjct: 77 PRKIRKLSPDDDASDGFNPEHNLSQMTTTKPATKSKL--SQSRTVTVPRIQARSLTCEGE 134
Query: 128 VEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIA 187
+EAA+ HLR+ D LASLIDIHPPPTF++F TPFLAL RSILYQQLA KAG SIYTRF+A
Sbjct: 135 LEAALHHLRSVDPLLASLIDIHPPPTFETFQTPFLALIRSILYQQLAAKAGNSIYTRFVA 194
Query: 188 LCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLF 247
LCGGE GVVPE VL LTPQQLRQIGVSGRKASYLHDLARKYQNGILSDS IVNMD+KSLF
Sbjct: 195 LCGGENGVVPENVLPLTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSGIVNMDEKSLF 254
Query: 248 TMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEK 307
TMLTMVNGIGSWSVHMFMI SLHRPDVLP+NDLGVRKGVQ+L +E+LPRPS+M+QLCEK
Sbjct: 255 TMLTMVNGIGSWSVHMFMINSLHRPDVLPVNDLGVRKGVQMLNGMEDLPRPSKMEQLCEK 314
Query: 308 WRPYRSVASWYLWRFVEAKGAPSSAAAVAAGAALPQPQQEE--------------QQQPQ 353
WRPYRSVASWYLWR +E+K P +AAA AGAAL PQ E+ QQQPQ
Sbjct: 315 WRPYRSVASWYLWRLIESKNTPPNAAAATAGAALSFPQLEDIQQQEQEQQHQQHQQQQPQ 374
Query: 354 LLDQINSLINIG 365
L+D +N++ +IG
Sbjct: 375 LMDPLNNVFSIG 386
>gi|449460261|ref|XP_004147864.1| PREDICTED: uncharacterized protein LOC101202943 [Cucumis sativus]
gi|449476816|ref|XP_004154842.1| PREDICTED: uncharacterized LOC101202943 [Cucumis sativus]
Length = 382
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/275 (77%), Positives = 228/275 (82%), Gaps = 6/275 (2%)
Query: 52 NVTPQTSSPPSKIPLRPRKIRKLSPDNGVDQASS--SQPTESSKATSAKSTKSRAIQQQQ 109
N Q SSPPSK+PLRPRKIRKLSP+ +S + P + KS KS+ Q+
Sbjct: 49 NAPSQISSPPSKMPLRPRKIRKLSPEESDPNSSHVVAIPDGPKPIATVKSNKSKTAHQRA 108
Query: 110 Q--TLTVPRIIARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRS 167
+ TVP AR LS EGEVE A+RHLRNAD LA LID+H PTFDSF TPFLALTRS
Sbjct: 109 AFASATVPP--ARSLSCEGEVEIALRHLRNADPLLAQLIDLHQRPTFDSFQTPFLALTRS 166
Query: 168 ILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARK 227
ILYQQLA+KAGTSIYTRFIALCGGEAGV+PETVLAL PQQLRQIG+SGRK+SYLHDLARK
Sbjct: 167 ILYQQLAYKAGTSIYTRFIALCGGEAGVLPETVLALNPQQLRQIGISGRKSSYLHDLARK 226
Query: 228 YQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQ 287
YQNGILSD AIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDL VRKGVQ
Sbjct: 227 YQNGILSDPAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLNVRKGVQ 286
Query: 288 LLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRF 322
LLY+LEELPRPSQMDQLCEKWRPYRSV SWY+WR
Sbjct: 287 LLYNLEELPRPSQMDQLCEKWRPYRSVGSWYMWRL 321
>gi|147792215|emb|CAN72984.1| hypothetical protein VITISV_009035 [Vitis vinifera]
Length = 353
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/322 (63%), Positives = 245/322 (76%), Gaps = 12/322 (3%)
Query: 52 NVTPQTSSPPSKIPLRPRKIRKLSPDNGVDQASSSQPTESSKATSAKSTKSRAIQQQ--Q 109
+++ Q SS SK+P R RKIRK+S + + S +E +RA ++ Q
Sbjct: 36 DISLQASSS-SKLPFRSRKIRKIS--SAATPSGSDGKSEPVSEDDLLKGGNRAWKRNAAQ 92
Query: 110 QTLTVPRIIARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSIL 169
T +P I+ +PLS EGE++ A+RHL +D LA+LI+ H PPTFDS H PFLAL +SIL
Sbjct: 93 STAALPTIV-KPLSCEGELDVALRHLTKSDPLLAALINTHQPPTFDSCHPPFLALAKSIL 151
Query: 170 YQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQ 229
YQQLA+KA TSIYTRF+ALCGGEAGVVP+ VLAL+P QLRQIGVSGRKA YLHDLA KY+
Sbjct: 152 YQQLAYKAATSIYTRFVALCGGEAGVVPDAVLALSPSQLRQIGVSGRKAGYLHDLASKYK 211
Query: 230 NGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLL 289
GILSDS+I+ MDDKSLFTMLTMV GIGSWSVHMFMIFSLHRPDVLP+ D+GVRKGVQ L
Sbjct: 212 TGILSDSSIMGMDDKSLFTMLTMVKGIGSWSVHMFMIFSLHRPDVLPVGDVGVRKGVQFL 271
Query: 290 YSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAKGAPSSAAAVA------AGAALPQ 343
Y LEELPRPSQM+QLCEKW+PYRSV SWY+WRFVEAKGAP + AAVA + Q
Sbjct: 272 YGLEELPRPSQMEQLCEKWKPYRSVGSWYMWRFVEAKGAPPARAAVALVDGATSEQQQQQ 331
Query: 344 PQQEEQQQPQLLDQINSLINIG 365
QQ++ QQ QL+D IN ++N+G
Sbjct: 332 EQQQQPQQLQLVDPINGIVNLG 353
>gi|225430742|ref|XP_002266618.1| PREDICTED: DNA-3-methyladenine glycosylase 1 [Vitis vinifera]
gi|297735147|emb|CBI17509.3| unnamed protein product [Vitis vinifera]
Length = 329
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/325 (61%), Positives = 238/325 (73%), Gaps = 38/325 (11%)
Query: 47 TITHANVTPQTSSPPSKIPLRPRKIRKLSPDNGVDQASSSQPTESSKATSAKSTKSRAIQ 106
T+T +++ Q SS SK+P R RKIRK+S S++ P+ S +
Sbjct: 31 TVTADDISLQASSS-SKLPFRSRKIRKIS--------SAATPSGSDGKSEP--------- 72
Query: 107 QQQQTLTVPRIIARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTR 166
PLS EGE++ A+RHL +D LA+LI+ H PPTFDS H PFLAL +
Sbjct: 73 --------------PLSCEGELDVALRHLTKSDPLLAALINTHQPPTFDSCHPPFLALAK 118
Query: 167 SILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLAR 226
SILYQQLA+KA TSIYTRF+ALCGGEAGVVP+ VLAL+P QLRQIGVSGRKA YLHDLA
Sbjct: 119 SILYQQLAYKAATSIYTRFVALCGGEAGVVPDAVLALSPSQLRQIGVSGRKAGYLHDLAS 178
Query: 227 KYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV 286
KY+ GILSDS+I+ MDDKSLFTMLTMV GIGSWSVHMFMIFSLHRPDVLP+ D+GVRKGV
Sbjct: 179 KYKTGILSDSSIMGMDDKSLFTMLTMVKGIGSWSVHMFMIFSLHRPDVLPVGDVGVRKGV 238
Query: 287 QLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAKGAPSSAAAVA------AGAA 340
Q LY LEELPRPSQM+QLCEKW+PYRSV SWY+WRFVEAKGAP + AAVA +
Sbjct: 239 QFLYGLEELPRPSQMEQLCEKWKPYRSVGSWYMWRFVEAKGAPPARAAVALVDGATSEQQ 298
Query: 341 LPQPQQEEQQQPQLLDQINSLINIG 365
Q QQ++ QQ QL+D IN ++N+G
Sbjct: 299 QQQEQQQQPQQLQLVDPINGIVNLG 323
>gi|326502686|dbj|BAJ98971.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511807|dbj|BAJ92048.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 326
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 154/214 (71%), Positives = 181/214 (84%)
Query: 115 PRIIARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLA 174
P + RPLS++GEVEAAIRHLR AD LA +ID H P+F H PF +L RSILYQQLA
Sbjct: 62 PSVRGRPLSADGEVEAAIRHLRVADPALAPVIDAHELPSFHCPHPPFHSLARSILYQQLA 121
Query: 175 FKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILS 234
FKA S+Y+RFIAL GGEAGV+P+ VLAL+ +QLRQIGVS RKASYLHDLARKY +GILS
Sbjct: 122 FKAAASVYSRFIALVGGEAGVLPDAVLALSAEQLRQIGVSARKASYLHDLARKYASGILS 181
Query: 235 DSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEE 294
D +IV MDD+SL MLTMVNGIG+WSVHMFMI+SL RPDVLP DLGVRKGVQ+LY LE+
Sbjct: 182 DDSIVAMDDRSLAAMLTMVNGIGAWSVHMFMIYSLARPDVLPSADLGVRKGVQMLYGLED 241
Query: 295 LPRPSQMDQLCEKWRPYRSVASWYLWRFVEAKGA 328
+PRPSQM++LCE+WRPYRSVA+WY+WR +E+K A
Sbjct: 242 VPRPSQMEKLCERWRPYRSVAAWYMWRLIESKAA 275
>gi|326498089|dbj|BAJ94907.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 325
Score = 334 bits (857), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 154/214 (71%), Positives = 181/214 (84%)
Query: 115 PRIIARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLA 174
P + RPLS++GEVEAAIRHLR AD LA +ID H P+F H PF +L RSILYQQLA
Sbjct: 61 PSVRGRPLSADGEVEAAIRHLRVADPALAPVIDTHELPSFHCPHPPFHSLARSILYQQLA 120
Query: 175 FKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILS 234
FKA S+Y+RFIAL GGEAGV+P+ VLAL+ +QLRQIGVS RKASYLHDLARKY +GILS
Sbjct: 121 FKAAASVYSRFIALVGGEAGVLPDAVLALSAEQLRQIGVSARKASYLHDLARKYASGILS 180
Query: 235 DSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEE 294
D +IV MDD+SL MLTMVNGIG+WSVHMFMI+SL RPDVLP DLGVRKGVQ+LY LE+
Sbjct: 181 DDSIVAMDDRSLAAMLTMVNGIGAWSVHMFMIYSLARPDVLPSADLGVRKGVQMLYGLED 240
Query: 295 LPRPSQMDQLCEKWRPYRSVASWYLWRFVEAKGA 328
+PRPSQM++LCE+WRPYRSVA+WY+WR +E+K A
Sbjct: 241 VPRPSQMEKLCERWRPYRSVAAWYMWRLIESKAA 274
>gi|212723910|ref|NP_001132742.1| uncharacterized protein LOC100194229 [Zea mays]
gi|194695282|gb|ACF81725.1| unknown [Zea mays]
gi|413948595|gb|AFW81244.1| hypothetical protein ZEAMMB73_471768 [Zea mays]
Length = 327
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 150/221 (67%), Positives = 181/221 (81%), Gaps = 3/221 (1%)
Query: 106 QQQQQTLTVPRIIARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALT 165
++ + T ++P +PLS+ GEV AIRHLR D LA++ID H PP F H PF +L
Sbjct: 75 KKHRLTFSIP---GQPLSAAGEVGVAIRHLRAVDPALAAVIDAHEPPVFQCPHRPFHSLV 131
Query: 166 RSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLA 225
RSILYQQLAFKA S+Y+RF+AL GGEA V P+ VLAL+P QLRQIGVS RKASYLHDLA
Sbjct: 132 RSILYQQLAFKAAASVYSRFLALLGGEASVAPDAVLALSPHQLRQIGVSPRKASYLHDLA 191
Query: 226 RKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKG 285
RKY +GILSD++IVNMDD+SL MLTMV GIG+WSVHMFMIFSL RPDVLP DLGVRKG
Sbjct: 192 RKYASGILSDASIVNMDDRSLAAMLTMVKGIGAWSVHMFMIFSLARPDVLPSADLGVRKG 251
Query: 286 VQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAK 326
VQ+LY+L+++PRPSQMD+LCE+WRPYRSV +WY+WR +E+K
Sbjct: 252 VQMLYALQDVPRPSQMDRLCERWRPYRSVGAWYMWRLIESK 292
>gi|255561124|ref|XP_002521574.1| DNA-3-methyladenine glycosylase, putative [Ricinus communis]
gi|223539252|gb|EEF40845.1| DNA-3-methyladenine glycosylase, putative [Ricinus communis]
Length = 280
Score = 327 bits (838), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 159/265 (60%), Positives = 192/265 (72%), Gaps = 29/265 (10%)
Query: 62 SKIPLRPRKIRKLSPDNGVDQASSSQPTESSKATSAKSTKSRAIQQQQQTLTVPRIIARP 121
+KIP RPRKIRKLS S++ TE+S A +
Sbjct: 36 TKIPFRPRKIRKLSI-----HTSTANNTEASSA------------------------GKL 66
Query: 122 LSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSI 181
LS++GE++ A+ HLRN++ LA+LI+ H P F+S PFL+L+RSILYQQLA A SI
Sbjct: 67 LSAKGEIDLALEHLRNSEPLLAALINTHKHPIFESNTPPFLSLSRSILYQQLALNAAKSI 126
Query: 182 YTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNM 241
YTRF+ LCGGE+GV+PE VL+L+ QQLR+IG+SGRKASYLHDLA KY+NG LSDS+I+ M
Sbjct: 127 YTRFLTLCGGESGVLPENVLSLSVQQLREIGISGRKASYLHDLADKYRNGSLSDSSILEM 186
Query: 242 DDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQM 301
D L T LT V GIG WSVHMFMIFSLHRPDVLP+ DLGVRKGVQ LY L+ELP+PS M
Sbjct: 187 SDDMLLTSLTAVKGIGVWSVHMFMIFSLHRPDVLPVGDLGVRKGVQSLYGLKELPQPSLM 246
Query: 302 DQLCEKWRPYRSVASWYLWRFVEAK 326
+QLCEKWRPYRSV SWY+WR +EAK
Sbjct: 247 EQLCEKWRPYRSVGSWYMWRLMEAK 271
>gi|5091600|gb|AAD39589.1|AC007858_3 10A19I.4 [Oryza sativa Japonica Group]
gi|215769455|dbj|BAH01684.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 334
Score = 326 bits (836), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 153/216 (70%), Positives = 179/216 (82%), Gaps = 3/216 (1%)
Query: 111 TLTVPRIIARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILY 170
TLTVP RPLS++GEV AAI+HLR AD LA++ID H PP F H PF +L RSILY
Sbjct: 71 TLTVP---GRPLSADGEVAAAIQHLRAADPALATVIDAHDPPAFQCPHRPFHSLVRSILY 127
Query: 171 QQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQN 230
QQLAFKA S+Y+RF++L GGE V+PE VLALT Q LRQIGVS RKASYLHDLARKY +
Sbjct: 128 QQLAFKAAASVYSRFLSLLGGEHNVLPEAVLALTTQDLRQIGVSPRKASYLHDLARKYAS 187
Query: 231 GILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLY 290
GILSD+A+VNMDD+SL MLTMV GIG+WSVHMFMIFSL+RPDVLP DLGVRKGVQ LY
Sbjct: 188 GILSDAAVVNMDDRSLAAMLTMVKGIGAWSVHMFMIFSLNRPDVLPAADLGVRKGVQHLY 247
Query: 291 SLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAK 326
L+ +PRPSQM++LCE+WRPYRSV +WY+WR +E+K
Sbjct: 248 GLDAVPRPSQMEKLCEQWRPYRSVGAWYMWRLIESK 283
>gi|222632677|gb|EEE64809.1| hypothetical protein OsJ_19665 [Oryza sativa Japonica Group]
Length = 328
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 153/216 (70%), Positives = 179/216 (82%), Gaps = 3/216 (1%)
Query: 111 TLTVPRIIARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILY 170
TLTVP RPLS++GEV AAI+HLR AD LA++ID H PP F H PF +L RSILY
Sbjct: 65 TLTVP---GRPLSADGEVAAAIQHLRAADPALATVIDAHDPPAFQCPHRPFHSLVRSILY 121
Query: 171 QQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQN 230
QQLAFKA S+Y+RF++L GGE V+PE VLALT Q LRQIGVS RKASYLHDLARKY +
Sbjct: 122 QQLAFKAAASVYSRFLSLLGGEHNVLPEAVLALTTQDLRQIGVSPRKASYLHDLARKYAS 181
Query: 231 GILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLY 290
GILSD+A+VNMDD+SL MLTMV GIG+WSVHMFMIFSL+RPDVLP DLGVRKGVQ LY
Sbjct: 182 GILSDAAVVNMDDRSLAAMLTMVKGIGAWSVHMFMIFSLNRPDVLPAADLGVRKGVQHLY 241
Query: 291 SLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAK 326
L+ +PRPSQM++LCE+WRPYRSV +WY+WR +E+K
Sbjct: 242 GLDAVPRPSQMEKLCEQWRPYRSVGAWYMWRLIESK 277
>gi|115465635|ref|NP_001056417.1| Os05g0579100 [Oryza sativa Japonica Group]
gi|51854312|gb|AAU10693.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113579968|dbj|BAF18331.1| Os05g0579100 [Oryza sativa Japonica Group]
Length = 323
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 153/216 (70%), Positives = 179/216 (82%), Gaps = 3/216 (1%)
Query: 111 TLTVPRIIARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILY 170
TLTVP RPLS++GEV AAI+HLR AD LA++ID H PP F H PF +L RSILY
Sbjct: 60 TLTVP---GRPLSADGEVAAAIQHLRAADPALATVIDAHDPPAFQCPHRPFHSLVRSILY 116
Query: 171 QQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQN 230
QQLAFKA S+Y+RF++L GGE V+PE VLALT Q LRQIGVS RKASYLHDLARKY +
Sbjct: 117 QQLAFKAAASVYSRFLSLLGGEHNVLPEAVLALTTQDLRQIGVSPRKASYLHDLARKYAS 176
Query: 231 GILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLY 290
GILSD+A+VNMDD+SL MLTMV GIG+WSVHMFMIFSL+RPDVLP DLGVRKGVQ LY
Sbjct: 177 GILSDAAVVNMDDRSLAAMLTMVKGIGAWSVHMFMIFSLNRPDVLPAADLGVRKGVQHLY 236
Query: 291 SLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAK 326
L+ +PRPSQM++LCE+WRPYRSV +WY+WR +E+K
Sbjct: 237 GLDAVPRPSQMEKLCEQWRPYRSVGAWYMWRLIESK 272
>gi|357132394|ref|XP_003567815.1| PREDICTED: probable DNA-3-methyladenine glycosylase 2-like
[Brachypodium distachyon]
Length = 323
Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 147/210 (70%), Positives = 175/210 (83%)
Query: 119 ARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAG 178
RPLS++GEV AAIRHLR AD LA +ID H PP F H PF +L RSILYQQLAFKA
Sbjct: 65 GRPLSADGEVAAAIRHLRAADTALAPVIDAHDPPVFHCPHRPFHSLVRSILYQQLAFKAA 124
Query: 179 TSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAI 238
S+Y+RF+AL GGE V+P+ VL+L+ QLRQIGVS RKASYLHDLARKY +GILSD+++
Sbjct: 125 ASVYSRFLALLGGEPQVLPDAVLSLSEDQLRQIGVSPRKASYLHDLARKYASGILSDTSV 184
Query: 239 VNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRP 298
V MDD+SL +MLTMV GIG+WSVHMFMIFSL RPDVLP DLGVRKGVQLLY L+++PRP
Sbjct: 185 VAMDDRSLASMLTMVKGIGAWSVHMFMIFSLARPDVLPSADLGVRKGVQLLYGLDDVPRP 244
Query: 299 SQMDQLCEKWRPYRSVASWYLWRFVEAKGA 328
SQM++LCE+WRPYRSV +WY+WR +E+K A
Sbjct: 245 SQMEKLCERWRPYRSVGAWYMWRLIESKAA 274
>gi|359475178|ref|XP_003631611.1| PREDICTED: probable DNA-3-methyladenine glycosylase 2-like [Vitis
vinifera]
Length = 273
Score = 308 bits (788), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 150/256 (58%), Positives = 187/256 (73%), Gaps = 9/256 (3%)
Query: 88 PTESSKATSAKSTKSRAIQQQQQTLTVPRIIARPLSSEGEVEAAIRHLRNADRQLASLID 147
P +S K +S S ++ AI +P I R LSS+ V AA+RHLR++D LA +ID
Sbjct: 22 PAKSRKLSSHSSPRTAAI-------LLP--ITRLLSSDDVVAAALRHLRSSDPVLAPVID 72
Query: 148 IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQ 207
+ PP F++ TPFLAL +SILYQQ+ KAGT+IY RF++LCGGE V P +VLALTP Q
Sbjct: 73 AYEPPKFENSDTPFLALAKSILYQQITHKAGTTIYNRFVSLCGGETRVCPISVLALTPPQ 132
Query: 208 LRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIF 267
L QIGVS RK S+LHDLA KY+ GILSDS I+ M+D++L +++ MV G G SVHMFMIF
Sbjct: 133 LLQIGVSARKVSFLHDLANKYRTGILSDSKILTMEDRALVSLIAMVKGFGVLSVHMFMIF 192
Query: 268 SLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAKG 327
SLHRPDVLP+ D +RKGVQ+LY LEELPRPSQM++LCE+WRPYRSVASWY+WR EA G
Sbjct: 193 SLHRPDVLPVGDANLRKGVQMLYGLEELPRPSQMEKLCERWRPYRSVASWYIWRLSEANG 252
Query: 328 APSSAAAVAAGAALPQ 343
A + GA P+
Sbjct: 253 VQGKAESGETGAGSPK 268
>gi|297741468|emb|CBI32599.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 147/245 (60%), Positives = 182/245 (74%), Gaps = 9/245 (3%)
Query: 88 PTESSKATSAKSTKSRAIQQQQQTLTVPRIIARPLSSEGEVEAAIRHLRNADRQLASLID 147
P +S K +S S ++ AI +P I R LSS+ V AA+RHLR++D LA +ID
Sbjct: 105 PAKSRKLSSHSSPRTAAI-------LLP--ITRLLSSDDVVAAALRHLRSSDPVLAPVID 155
Query: 148 IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQ 207
+ PP F++ TPFLAL +SILYQQ+ KAGT+IY RF++LCGGE V P +VLALTP Q
Sbjct: 156 AYEPPKFENSDTPFLALAKSILYQQITHKAGTTIYNRFVSLCGGETRVCPISVLALTPPQ 215
Query: 208 LRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIF 267
L QIGVS RK S+LHDLA KY+ GILSDS I+ M+D++L +++ MV G G SVHMFMIF
Sbjct: 216 LLQIGVSARKVSFLHDLANKYRTGILSDSKILTMEDRALVSLIAMVKGFGVLSVHMFMIF 275
Query: 268 SLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAKG 327
SLHRPDVLP+ D +RKGVQ+LY LEELPRPSQM++LCE+WRPYRSVASWY+WR EA G
Sbjct: 276 SLHRPDVLPVGDANLRKGVQMLYGLEELPRPSQMEKLCERWRPYRSVASWYIWRLSEANG 335
Query: 328 APSSA 332
A
Sbjct: 336 VQGKA 340
>gi|15230333|ref|NP_190657.1| DNA-3-methyladenine glycosylase II [Arabidopsis thaliana]
gi|4835239|emb|CAB42917.1| putative DNA-3-methyladenine glycosidase [Arabidopsis thaliana]
gi|26453173|dbj|BAC43662.1| putative DNA-3-methyladenine glycosidase [Arabidopsis thaliana]
gi|28950831|gb|AAO63339.1| At3g50880 [Arabidopsis thaliana]
gi|332645200|gb|AEE78721.1| DNA-3-methyladenine glycosylase II [Arabidopsis thaliana]
Length = 273
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 156/288 (54%), Positives = 193/288 (67%), Gaps = 41/288 (14%)
Query: 45 NATITHANVT-PQTSSPPSKIPLRPRKIRKLSPDNGVDQASSSQPTESSKATSAKSTKSR 103
++ I+ N+T + S S+I RPRKIRK+S D P+
Sbjct: 18 DSLISAGNLTVSEVSGSSSRIRFRPRKIRKVSSD----------PS-------------- 53
Query: 104 AIQQQQQTLTVPRIIAR---PLSSEGEVEAAIRHLRNADRQLASLIDIH-PPPTFDSFHT 159
PRII PLS++ V+ A+RHL+++D L +LI H PP FDS +T
Sbjct: 54 -----------PRIIITASPPLSTKSTVDIALRHLQSSDELLGALITTHNDPPLFDSSNT 102
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALC-GGEAGVVPETVLALTPQQLRQIGVSGRKA 218
PFL+L RSILYQQLA KA IY RFI+L GGEAGVVPE+V++L+ LR+IGVSGRKA
Sbjct: 103 PFLSLARSILYQQLATKAAKCIYDRFISLFNGGEAGVVPESVISLSAVDLRKIGVSGRKA 162
Query: 219 SYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
SYLHDLA KY NG+LSD I+ M D+ L LT+V GIG W+VHMFMIFSLHRPDVLP+
Sbjct: 163 SYLHDLADKYNNGVLSDELILKMSDEELIDRLTLVKGIGVWTVHMFMIFSLHRPDVLPVG 222
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAK 326
DLGVRKGV+ LY L+ LP P QM+QLCEKWRPYRSV SWY+WR +E++
Sbjct: 223 DLGVRKGVKDLYGLKNLPGPLQMEQLCEKWRPYRSVGSWYMWRLIESR 270
>gi|449451521|ref|XP_004143510.1| PREDICTED: DNA-3-methyladenine glycosylase 1-like [Cucumis sativus]
gi|449496495|ref|XP_004160148.1| PREDICTED: DNA-3-methyladenine glycosylase 1-like [Cucumis sativus]
Length = 284
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 149/276 (53%), Positives = 190/276 (68%), Gaps = 16/276 (5%)
Query: 51 ANVTPQTSSPPSKIPLRPRKIRKLSPDNGVDQASSSQPTESSKATSAKSTKSRAIQQQQQ 110
++ P + S SKIP K+RK+S S+ +PT+ + +R
Sbjct: 17 SDAVPLSPSASSKIPFPSTKVRKIS--------SNQEPTKPQISAPGGYNPTRIFPN--- 65
Query: 111 TLTVPRIIARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILY 170
L P + LSS ++ AI HLR +D L SL+D P F S + PFLALT+SILY
Sbjct: 66 -LADP---VKSLSSSDKISTAINHLRRSDPLLISLLDSCETPNFKS-NPPFLALTKSILY 120
Query: 171 QQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQN 230
QQLA KA +IY RF +LCGGEA V+P+TVL L+PQQLR IGVSGRKASYLHDLA K+
Sbjct: 121 QQLATKAAEAIYNRFASLCGGEAAVLPDTVLGLSPQQLRVIGVSGRKASYLHDLATKFIE 180
Query: 231 GILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLY 290
G LS+S I+ MDD++L LT V GIG WSVHMFMIF+LHRPDVLP+ DLGVRKGVQ LY
Sbjct: 181 GSLSNSFILEMDDETLLRALTAVKGIGVWSVHMFMIFTLHRPDVLPVGDLGVRKGVQRLY 240
Query: 291 SLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAK 326
L+ELP+P++M++LCEKW+PYRS+ +WY+WR ++AK
Sbjct: 241 GLKELPKPAEMEKLCEKWKPYRSIGAWYMWRLIDAK 276
>gi|297816336|ref|XP_002876051.1| HhH-GPD base excision DNA repair family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321889|gb|EFH52310.1| HhH-GPD base excision DNA repair family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 273
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 149/276 (53%), Positives = 185/276 (67%), Gaps = 40/276 (14%)
Query: 56 QTSSPPSKIPLRPRKIRKLSPDNGVDQASSSQPTESSKATSAKSTKSRAIQQQQQTLTVP 115
+ S S+I RPRKIRK+S D P+ P
Sbjct: 30 EASGSSSRITFRPRKIRKVSSD----------PS-------------------------P 54
Query: 116 RIIAR---PLSSEGEVEAAIRHLRNADRQLASLIDIH-PPPTFDSFHTPFLALTRSILYQ 171
RII PLS++ V+ A+RHL+++D L ++I H PP F+S + PFL+L RSILYQ
Sbjct: 55 RIIITASPPLSTKSTVDLALRHLQSSDELLGAIITSHNDPPVFESSNPPFLSLARSILYQ 114
Query: 172 QLAFKAGTSIYTRFIALC-GGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQN 230
QLA KA IY RFI+L GGE+GVVPE+V++L+ LR+IGVSGRKASYLHDLA KY N
Sbjct: 115 QLATKAAKCIYDRFISLFNGGESGVVPESVISLSAVDLRKIGVSGRKASYLHDLAEKYNN 174
Query: 231 GILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLY 290
G+LSD I+ M D+ L LT+V GIG W+VHMFMIFSLHRPDVLP+ DLGVR GV+ LY
Sbjct: 175 GVLSDELIMKMSDEELIERLTLVKGIGVWTVHMFMIFSLHRPDVLPVGDLGVRNGVKDLY 234
Query: 291 SLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAK 326
L++LP P QM+QLCEKWRPYRSV SWY+WR +EA+
Sbjct: 235 GLKDLPGPLQMEQLCEKWRPYRSVGSWYMWRLIEAR 270
>gi|224094797|ref|XP_002310239.1| predicted protein [Populus trichocarpa]
gi|224167699|ref|XP_002339063.1| predicted protein [Populus trichocarpa]
gi|222853142|gb|EEE90689.1| predicted protein [Populus trichocarpa]
gi|222874293|gb|EEF11424.1| predicted protein [Populus trichocarpa]
Length = 207
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 130/207 (62%), Positives = 164/207 (79%)
Query: 120 RPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGT 179
+PLS +GE+E A+ HL +D LA L++ H PP + +PFL+LT+SIL+QQLA A
Sbjct: 1 KPLSHKGEIELALDHLSKSDPLLAPLLNSHEPPALNPCTSPFLSLTKSILFQQLATNAAK 60
Query: 180 SIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIV 239
SIYTRF+ LC GE+ V P+TVL+L+ +LR+IGVSGRKASYLHDLA KY+NG LSDS+I+
Sbjct: 61 SIYTRFLTLCDGESQVNPDTVLSLSAPKLREIGVSGRKASYLHDLAEKYRNGSLSDSSIL 120
Query: 240 NMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPS 299
M+D L LT V GIG WSVHMFM+FSLHRPDVLP+ DLGVRKGVQ LY L++LP+
Sbjct: 121 EMNDDMLLNRLTEVKGIGVWSVHMFMLFSLHRPDVLPVGDLGVRKGVQSLYGLKDLPQAL 180
Query: 300 QMDQLCEKWRPYRSVASWYLWRFVEAK 326
+M+Q+CEKW+PYRSV SWY+WR +EAK
Sbjct: 181 EMEQICEKWKPYRSVGSWYMWRLMEAK 207
>gi|357483447|ref|XP_003612010.1| DNA-3-methyladenine glycosylase [Medicago truncatula]
gi|355513345|gb|AES94968.1| DNA-3-methyladenine glycosylase [Medicago truncatula]
Length = 281
Score = 270 bits (690), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 120/214 (56%), Positives = 162/214 (75%), Gaps = 2/214 (0%)
Query: 117 IIARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFH--TPFLALTRSILYQQLA 174
II +PL+S+ E+ AA+ HLR AD L+++I+ PPP F + + TPF +L ++++ QQL+
Sbjct: 59 IIQKPLTSQNEITAALNHLRAADPLLSTIINTFPPPQFSNSNAITPFFSLIKTLISQQLS 118
Query: 175 FKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILS 234
KA +SI RFI+L + ++P TVL++TP LR +G+S RKA+Y+HDLA KY +G LS
Sbjct: 119 IKASSSIEQRFISLFTNQCSILPNTVLSVTPDTLRSVGISARKATYIHDLATKYADGFLS 178
Query: 235 DSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEE 294
DS+IV MDD+ L+ L V GIG WSVHMFMIF+LHRPDVLP+ DL VR+GV+ LY L+
Sbjct: 179 DSSIVEMDDEMLYEKLMSVKGIGPWSVHMFMIFTLHRPDVLPVGDLVVRRGVEKLYGLKV 238
Query: 295 LPRPSQMDQLCEKWRPYRSVASWYLWRFVEAKGA 328
LP P +M+ LCEKW+PYRSV SWY++RFVEAKG
Sbjct: 239 LPSPEKMEGLCEKWKPYRSVGSWYMYRFVEAKGV 272
>gi|388495518|gb|AFK35825.1| unknown [Medicago truncatula]
Length = 281
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 120/214 (56%), Positives = 162/214 (75%), Gaps = 2/214 (0%)
Query: 117 IIARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFH--TPFLALTRSILYQQLA 174
II +PL+S+ E+ AA+ HLR AD L+++I+ PPP F + + TPF +L ++++ QQL+
Sbjct: 59 IIQKPLTSQNEITAALNHLRAADPLLSTIINTFPPPQFSNSNAITPFFSLIKTLISQQLS 118
Query: 175 FKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILS 234
KA +SI RFI+L + ++P TVL++TP LR +G+S RKA+Y+HDLA KY +G LS
Sbjct: 119 IKASSSIEQRFISLFTNQCSILPNTVLSVTPDTLRSVGISARKAAYIHDLATKYADGFLS 178
Query: 235 DSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEE 294
DS+IV MDD+ L+ L V GIG WSVHMFMIF+LHRPDVLP+ DL VR+GV+ LY L+
Sbjct: 179 DSSIVEMDDEMLYEKLMSVKGIGPWSVHMFMIFTLHRPDVLPVGDLVVRRGVEKLYGLKV 238
Query: 295 LPRPSQMDQLCEKWRPYRSVASWYLWRFVEAKGA 328
LP P +M+ LCEKW+PYRSV SWY++RFVEAKG
Sbjct: 239 LPSPEKMEGLCEKWKPYRSVGSWYMYRFVEAKGV 272
>gi|226493015|ref|NP_001151950.1| DNA-3-methyladenine glycosylase 1 [Zea mays]
gi|195651307|gb|ACG45121.1| DNA-3-methyladenine glycosylase 1 [Zea mays]
gi|413946575|gb|AFW79224.1| DNA-3-methyladenine glycosylase 1 [Zea mays]
Length = 291
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/221 (52%), Positives = 142/221 (64%), Gaps = 15/221 (6%)
Query: 123 SSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTP----FLALTRSILYQQLAFKAG 178
SS GE+ AA+RHL+ AD L ++I PTF + TP F +L RSILYQQLA A
Sbjct: 63 SSPGELAAALRHLQAADPLLTAVIANTEAPTFTA--TPSLPAFHSLARSILYQQLATSAA 120
Query: 179 TSIYTRFIALCGGEAGVVPETVLALTPQQL---------RQIGVSGRKASYLHDLARKYQ 229
+IY RF+AL + R IGVSGRKASYLHDLA ++
Sbjct: 121 DAIYARFLALLPSASAAAAAVAADAVTPAAVLALAAADLRTIGVSGRKASYLHDLAARFA 180
Query: 230 NGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLL 289
G LSDSA+ MD+ +L LT V G+G W+VHMFMIFSLHRPD+LP DLGVRKGVQ L
Sbjct: 181 AGELSDSAVAAMDEAALLAELTKVRGVGEWTVHMFMIFSLHRPDILPCGDLGVRKGVQEL 240
Query: 290 YSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAKGAPS 330
Y L+ LP P +M LCE+WRPYRSV +WY+WR +E+KGA S
Sbjct: 241 YKLKSLPNPEEMAALCERWRPYRSVGAWYMWRLMESKGAAS 281
>gi|115465503|ref|NP_001056351.1| Os05g0567500 [Oryza sativa Japonica Group]
gi|51854286|gb|AAU10667.1| unknown protein [Oryza sativa Japonica Group]
gi|113579902|dbj|BAF18265.1| Os05g0567500 [Oryza sativa Japonica Group]
gi|215706409|dbj|BAG93265.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768106|dbj|BAH00335.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632592|gb|EEE64724.1| hypothetical protein OsJ_19580 [Oryza sativa Japonica Group]
Length = 290
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/274 (47%), Positives = 159/274 (58%), Gaps = 42/274 (15%)
Query: 63 KIPLRPRKIRKLSPDNGVDQASSSQPTESSKATSAKSTKSRAIQQQQQTLTVPRIIARPL 122
KI R RKI K +P G A+++ L+ P PL
Sbjct: 28 KISFRSRKIVKSTPAKGKSVATTTT----------------------AVLSPP-----PL 60
Query: 123 SSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDS------FHTPFLALTRSILYQQLAFK 176
SS GE+ AA+ HLR AD L+ +I P F S FH+ L SIL+QQLA
Sbjct: 61 SSPGELAAALSHLRTADPLLSEVISSTGAPAFISSPSRPAFHS----LAHSILHQQLAPS 116
Query: 177 AGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSGRKASYLHDLARKYQNG 231
A +IY RF+AL A P VLAL+ LR IGVS RKA+YLHDLA ++ G
Sbjct: 117 AAAAIYARFLALIPAAADPDAAVVNPAAVLALSAADLRAIGVSARKAAYLHDLAGRFAAG 176
Query: 232 ILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYS 291
LS+SA+ MD+ +L LT V G+G W+VHMFMIFSLHRPDVLP DLGVRKGVQ LY
Sbjct: 177 ELSESAVAAMDEAALLAELTKVKGVGEWTVHMFMIFSLHRPDVLPSGDLGVRKGVQELYG 236
Query: 292 LEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEA 325
L LP+P +M LCE+WRPYRSV +WY+WR +E+
Sbjct: 237 LPALPKPEEMAALCERWRPYRSVGAWYMWRLMES 270
>gi|125553355|gb|EAY99064.1| hypothetical protein OsI_21021 [Oryza sativa Indica Group]
Length = 289
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 129/274 (47%), Positives = 159/274 (58%), Gaps = 42/274 (15%)
Query: 63 KIPLRPRKIRKLSPDNGVDQASSSQPTESSKATSAKSTKSRAIQQQQQTLTVPRIIARPL 122
KI R RKI K +P G A+++ L+ P PL
Sbjct: 27 KISFRSRKIVKSTPAKGKSVATTTT----------------------AVLSPP-----PL 59
Query: 123 SSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDS------FHTPFLALTRSILYQQLAFK 176
SS GE+ AA+ HLR AD L+ +I P F S FH+ L SIL+QQLA
Sbjct: 60 SSPGELAAALSHLRTADPLLSEVIASTGAPAFISSPSRPAFHS----LAHSILHQQLAPS 115
Query: 177 AGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSGRKASYLHDLARKYQNG 231
A +IY RF+AL A P VLAL+ LR IGVS RKA+YLHDLA ++ G
Sbjct: 116 AAAAIYARFLALIPAAADPDAAVVNPAAVLALSAADLRAIGVSARKAAYLHDLAGRFAAG 175
Query: 232 ILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYS 291
LS+SA+ MD+ +L LT V G+G W+VHMFMIFSLHRPDVLP DLGVRKGVQ LY
Sbjct: 176 ELSESAVAAMDEAALLAELTKVKGVGEWTVHMFMIFSLHRPDVLPSGDLGVRKGVQELYG 235
Query: 292 LEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEA 325
L LP+P +M LCE+WRPYRSV +WY+WR +E+
Sbjct: 236 LPALPKPEEMAALCERWRPYRSVGAWYMWRLMES 269
>gi|168003596|ref|XP_001754498.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694119|gb|EDQ80468.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 205
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 107/205 (52%), Positives = 134/205 (65%), Gaps = 1/205 (0%)
Query: 122 LSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSI 181
LSS + A +HL AD LA +I P F++ F AL RSI+ QQLA KA +I
Sbjct: 1 LSSADAIAEATKHLLAADANLACVIQKSNSPPFENDGNSFAALVRSIVSQQLAVKAAATI 60
Query: 182 YTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNM 241
+ R +ALCGG V P + ALT +LR G+SGRK YLHDLA K +G LSD ++ M
Sbjct: 61 HARLVALCGGPQKVTPAAIAALTAGELRGAGISGRKEVYLHDLADKLVSGALSDEKLMAM 120
Query: 242 DDKS-LFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQ 300
+D+ L T LT V GIG WS HMFMIF LHRPDVLP+ DLG+RKG Q L+ L+ LP +
Sbjct: 121 EDEDDLVTALTAVKGIGVWSAHMFMIFHLHRPDVLPVGDLGIRKGFQKLFHLKHLPCAEE 180
Query: 301 MDQLCEKWRPYRSVASWYLWRFVEA 325
M +L + WRPYRS+ASWYLW+ +A
Sbjct: 181 MHKLADSWRPYRSLASWYLWQLKDA 205
>gi|242091399|ref|XP_002441532.1| hypothetical protein SORBIDRAFT_09g028800 [Sorghum bicolor]
gi|241946817|gb|EES19962.1| hypothetical protein SORBIDRAFT_09g028800 [Sorghum bicolor]
Length = 293
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/218 (55%), Positives = 146/218 (66%), Gaps = 17/218 (7%)
Query: 123 SSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTP----FLALTRSILYQQLAFKAG 178
SS GE+ AA+ HL+ AD LA++I PTF + TP F +L RSILYQQLA A
Sbjct: 63 SSPGELAAALSHLQAADPLLAAVIASTEAPTFAA--TPSLPAFHSLARSILYQQLAPSAA 120
Query: 179 TSIYTRFIALCGGEAG-----------VVPETVLALTPQQLRQIGVSGRKASYLHDLARK 227
+IY RF+AL + V P VLAL LR IGVSGRKASYLHDLA +
Sbjct: 121 DAIYARFLALLPSASAAAANVAADAVTVTPAAVLALAAADLRTIGVSGRKASYLHDLAAR 180
Query: 228 YQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQ 287
+ G LSDSA+ MD+ +L LT V G+G W+VHMFMIFSLHRPDVLP DLGVRKGVQ
Sbjct: 181 FAAGELSDSAVAAMDEAALLAELTKVRGVGEWTVHMFMIFSLHRPDVLPCGDLGVRKGVQ 240
Query: 288 LLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEA 325
LY+L+ LP P +M LCE+WRPYRSV +WY+WR +E+
Sbjct: 241 ELYNLKGLPNPEEMVALCERWRPYRSVGAWYMWRLMES 278
>gi|326503800|dbj|BAK02686.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 277
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 109/202 (53%), Positives = 135/202 (66%), Gaps = 5/202 (2%)
Query: 123 SSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIY 182
S+ GE+ AA+RHL AD L+ +I P F S + L SILYQQLA + +IY
Sbjct: 63 SAPGELAAALRHLAAADPLLSEVIASTDAPAFISTSS----LPCSILYQQLATSSTAAIY 118
Query: 183 TRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMD 242
RF+ + V P +LA LR IGVSGRKA+YLHDLA + G LS+S++ MD
Sbjct: 119 ARFLP-SDADGSVSPAAMLAFAVANLRAIGVSGRKAAYLHDLAASFAAGYLSESSVAAMD 177
Query: 243 DKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMD 302
+ +L LT V GIG W+VHMFMIFSLHRPDVLP DLGVRKGVQ LY L+ LP+P +M
Sbjct: 178 EDALLAQLTRVKGIGEWTVHMFMIFSLHRPDVLPSGDLGVRKGVQELYKLKALPKPEEMA 237
Query: 303 QLCEKWRPYRSVASWYLWRFVE 324
LCE+WRPYRSV +WY+WR +E
Sbjct: 238 ALCERWRPYRSVGAWYMWRLLE 259
>gi|168038932|ref|XP_001771953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676735|gb|EDQ63214.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 178
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 88/166 (53%), Positives = 118/166 (71%)
Query: 159 TPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKA 218
T F AL RSI+YQQ++ KA +IY R I++CGG V P + ALT ++LR +G+SGRK
Sbjct: 7 TCFTALARSIVYQQISGKAACAIYCRLISICGGLESVTPPVIAALTVEELRAVGISGRKG 66
Query: 219 SYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
YLHDLA K+ +G+LS++ ++ M++ L LT V GIG WS HMFMIF L +PDVLP+
Sbjct: 67 LYLHDLAEKFTSGLLSEAKLIIMNEDDLVKALTAVKGIGVWSAHMFMIFYLRKPDVLPVG 126
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
DL +RK Q LY L +LP P++M +L WRPYR++ASWYLWR +
Sbjct: 127 DLAIRKAFQKLYHLNQLPSPAEMQELAFPWRPYRTLASWYLWRMTD 172
>gi|262196681|ref|YP_003267890.1| DNA-3-methyladenine glycosylase II [Haliangium ochraceum DSM 14365]
gi|262080028|gb|ACY15997.1| DNA-3-methyladenine glycosylase II [Haliangium ochraceum DSM 14365]
Length = 220
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/198 (45%), Positives = 122/198 (61%)
Query: 127 EVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFI 186
++ A++ HLR + +LI +H PP F +L R+I+YQQLA +A +IY RF+
Sbjct: 17 DIAASLVHLRGTGAHMPALIAVHGPPDLARTRNSFASLGRAIVYQQLATRAAAAIYARFL 76
Query: 187 ALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSL 246
AL P +LA++ LR G+S KA+ L DLA K+ +G + MD L
Sbjct: 77 ALFPRGRFPTPAALLAVSEDTLRSAGLSRAKATALRDLAAKFADGSVRSRQFSRMDADEL 136
Query: 247 FTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCE 306
LT V GIG WSV MF+IF L RPDVLP+ DLGVRKG+Q + LEELP+P++M +L
Sbjct: 137 RATLTQVRGIGPWSVDMFLIFGLMRPDVLPVGDLGVRKGMQRYFELEELPKPAEMQELAA 196
Query: 307 KWRPYRSVASWYLWRFVE 324
W P+RSVASWY+WR E
Sbjct: 197 PWAPFRSVASWYMWRVAE 214
>gi|427720935|ref|YP_007068929.1| HhH-GPD family protein [Calothrix sp. PCC 7507]
gi|427353371|gb|AFY36095.1| HhH-GPD family protein [Calothrix sp. PCC 7507]
Length = 203
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 127/197 (64%), Gaps = 3/197 (1%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTP---FLALTRSILYQQLAFKAGTSIYTRFIA 187
AI L+ +DR LA +I+ D F +L+RSILYQQL+ KA +I+ RF+
Sbjct: 6 AIAALKTSDRILAPIIEQIGVCQLDQVQQTGDLFYSLSRSILYQQLSGKAAAAIHHRFLQ 65
Query: 188 LCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLF 247
L E PE VL T + LR +G+S K YL DLA+ NG+ + + + M+D+++
Sbjct: 66 LYADEPFPTPEAVLNTTDETLRGVGISRPKVVYLKDLAQNILNGLPTLTELEAMEDEAII 125
Query: 248 TMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEK 307
+LT V GIG W+V M +IF LHRPDVLP++DLG+R G++ +YSL ELP +++L ++
Sbjct: 126 KILTQVKGIGRWTVQMLLIFRLHRPDVLPVDDLGIRSGIRRIYSLPELPDKKTVEKLGQQ 185
Query: 308 WRPYRSVASWYLWRFVE 324
W+PY +VASWY+WR +E
Sbjct: 186 WKPYCTVASWYIWRSLE 202
>gi|116625362|ref|YP_827518.1| DNA-3-methyladenine glycosylase II [Candidatus Solibacter usitatus
Ellin6076]
gi|116228524|gb|ABJ87233.1| DNA-3-methyladenine glycosylase II [Candidatus Solibacter usitatus
Ellin6076]
Length = 200
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 122/197 (61%), Gaps = 2/197 (1%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A++HLR +D L+++I+ F L RSI+YQQL+ + I R +A G
Sbjct: 4 AVQHLRKSDPVLSAIIERVGAYGIQFREPDFETLVRSIVYQQLSGRVAKVILDRLVAAVG 63
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
E V PE +LAL P ++R++G+S +K +Y+ DLAR ++G L + + + D+ + L
Sbjct: 64 RE--VTPEKILALRPGRMRKLGLSTQKTAYIRDLARHTRDGRLVFTELPALTDEEVIERL 121
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRP 310
T V GIG W+ MF++F+L R DVLP DLGVR ++ Y L ELP P++M++L WRP
Sbjct: 122 TQVKGIGVWTAQMFLMFALRRHDVLPTGDLGVRNAIRKAYDLAELPTPAEMEELARNWRP 181
Query: 311 YRSVASWYLWRFVEAKG 327
+ SVASWYLWR +E +
Sbjct: 182 WCSVASWYLWRSLEGQA 198
>gi|444918607|ref|ZP_21238673.1| DNA-3-methyladenine glycosylase II [Cystobacter fuscus DSM 2262]
gi|444709655|gb|ELW50660.1| DNA-3-methyladenine glycosylase II [Cystobacter fuscus DSM 2262]
Length = 232
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 81/171 (47%), Positives = 106/171 (61%), Gaps = 1/171 (0%)
Query: 155 DSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVS 214
++ H PF+AL RSI YQQL KA +I+ R G A PE VLA+ + LR G+S
Sbjct: 55 EALHNPFVALARSIAYQQLTGKAAATIFGRVCERVGQGARFTPEAVLAVPVEDLRAAGLS 114
Query: 215 GRKASYLHDLARKYQNG-ILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPD 273
G KA+ + DLA K + G + + M D +L LT V GIG W+V M +IF L RPD
Sbjct: 115 GAKAAAMRDLALKAREGEVPTLVRARRMSDAALVEHLTKVRGIGQWTVEMMLIFRLGRPD 174
Query: 274 VLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
VLP++D GVRKG Y L E+PR ++ E+WRP+RSVASWY+WR +E
Sbjct: 175 VLPVDDYGVRKGFMRTYGLAEMPRARELLAHGERWRPWRSVASWYMWRALE 225
>gi|108758816|ref|YP_629808.1| DNA-3-methyladenine glycosylase [Myxococcus xanthus DK 1622]
gi|108462696|gb|ABF87881.1| putative DNA-3-methyladenine glycosylase [Myxococcus xanthus DK
1622]
Length = 224
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/201 (43%), Positives = 113/201 (56%), Gaps = 3/201 (1%)
Query: 133 RHLRNADRQLASLIDIHPPPTFDS--FHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
R L AD L +L+ P H+PF AL SI+YQQL KA +I+ R G
Sbjct: 21 RALSRADPTLGALMKSVGPFRLQVRPLHSPFGALAESIVYQQLHGKAAATIFGRVCERVG 80
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVN-MDDKSLFTM 249
PE +LA+ LR+ G+S K + L DLARK +G + A V MDD L
Sbjct: 81 SGRKFTPEALLAVPDTSLREAGLSANKLAALQDLARKTLDGTVPPLAKVRRMDDAELIEH 140
Query: 250 LTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWR 309
T V GIG W+V M ++F L RPDVLP++D GVRKG Y L E+P+P + E+WR
Sbjct: 141 FTQVRGIGQWTVEMLLMFQLERPDVLPVDDYGVRKGFMKAYGLTEMPKPKALLAYGERWR 200
Query: 310 PYRSVASWYLWRFVEAKGAPS 330
P+RSVASWY+WR E AP+
Sbjct: 201 PWRSVASWYMWRSAELPDAPT 221
>gi|442318671|ref|YP_007358692.1| DNA-3-methyladenine glycosylase [Myxococcus stipitatus DSM 14675]
gi|441486313|gb|AGC43008.1| DNA-3-methyladenine glycosylase [Myxococcus stipitatus DSM 14675]
Length = 229
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/176 (46%), Positives = 106/176 (60%), Gaps = 1/176 (0%)
Query: 157 FHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGR 216
H+PF AL SI+YQQL KA +I+ R G P+ +LA +LR+ G+S
Sbjct: 53 LHSPFAALAESIVYQQLHGKAAAAIFGRVCERVGKGRRFTPQALLATADTELREAGLSAN 112
Query: 217 KASYLHDLARKYQNGILSDSAIV-NMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVL 275
K + L DLARK +G + A V M+D L T V GIG W+V M +IF L RPDVL
Sbjct: 113 KLAALQDLARKSLDGTVPPLARVRKMEDAELIEHCTQVRGIGQWTVEMLLIFRLGRPDVL 172
Query: 276 PINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAKGAPSS 331
P++D GVRKG L Y L E+PRP + + E+WRP+RSVASWY+WR E P++
Sbjct: 173 PVDDFGVRKGFMLTYGLPEMPRPKTVLEFGERWRPWRSVASWYMWRATELPVEPAA 228
>gi|384254210|gb|EIE27684.1| DNA glycosylase [Coccomyxa subellipsoidea C-169]
Length = 208
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 114/187 (60%), Gaps = 11/187 (5%)
Query: 142 LASLIDIH-------PPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAG 194
LA+LI H P T +FH L I+ QQL+ A I R +A CGG
Sbjct: 5 LAALIKEHGVPDKLLPTGTDSAFH----GLAHIIIDQQLSILAAKCIANRVLAACGGAQV 60
Query: 195 VVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVN 254
+ P VL + P +LR G+S K +Y+ DLA+++++G L+ IV +DD +L+ L+ V
Sbjct: 61 LEPAAVLKVPPTELRACGLSQAKTNYIVDLAQRFESGQLTTEGIVALDDDTLYQQLSAVK 120
Query: 255 GIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSV 314
GIG WSV MF +F RPD+LP+ DL VRKG Q LY L+ +P +QM ++ EKWRPYRS+
Sbjct: 121 GIGRWSVDMFAMFHAGRPDILPVGDLAVRKGFQALYGLKAIPTDAQMAEISEKWRPYRSL 180
Query: 315 ASWYLWR 321
S+Y+WR
Sbjct: 181 GSYYMWR 187
>gi|383453578|ref|YP_005367567.1| putative DNA-3-methyladenine glycosylase [Corallococcus coralloides
DSM 2259]
gi|380734936|gb|AFE10938.1| putative DNA-3-methyladenine glycosylase [Corallococcus coralloides
DSM 2259]
Length = 231
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/195 (45%), Positives = 113/195 (57%), Gaps = 3/195 (1%)
Query: 130 AAIRHLRNADRQLASLIDIHPPPTFDS--FHTPFLALTRSILYQQLAFKAGTSIYTRFIA 187
AA R L AD L +L P F+ H+PF AL SI+YQQL +A +I+ R
Sbjct: 22 AARRALVRADPILGTLFKTIGPFRFERSPLHSPFEALAHSIVYQQLHGRAAATIFGRVCE 81
Query: 188 LCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVN-MDDKSL 246
G G P+ +LAL LR+ G+S K + DLARK +G + A V M D L
Sbjct: 82 RVGQGKGFTPQKLLALPDATLREAGLSANKLLAIQDLARKTVDGTVPPLARVRRMSDADL 141
Query: 247 FTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCE 306
LT V GIG W+V M +IF L RPD+LP++D GVRKG +L+ L+E P+P + E
Sbjct: 142 IEHLTQVRGIGQWTVEMLLIFRLGRPDILPVDDYGVRKGFMVLHGLKEQPKPKALLAYGE 201
Query: 307 KWRPYRSVASWYLWR 321
+WRPYRSV SWYLWR
Sbjct: 202 RWRPYRSVVSWYLWR 216
>gi|115372337|ref|ZP_01459646.1| DNA-3-methyladenine glycosylase 1 [Stigmatella aurantiaca DW4/3-1]
gi|310819603|ref|YP_003951961.1| DNA-3-methyladenine glycosylase [Stigmatella aurantiaca DW4/3-1]
gi|115370550|gb|EAU69476.1| DNA-3-methyladenine glycosylase 1 [Stigmatella aurantiaca DW4/3-1]
gi|309392675|gb|ADO70134.1| DNA-3-methyladenine glycosylase [Stigmatella aurantiaca DW4/3-1]
Length = 229
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/198 (43%), Positives = 117/198 (59%), Gaps = 3/198 (1%)
Query: 130 AAIRHLRNADRQLASLIDIHPPPTFD--SFHTPFLALTRSILYQQLAFKAGTSIYTRFIA 187
+A R L AD LA+L+ P + +PF AL SI+YQQL +A +I+ R
Sbjct: 18 SARRALARADPTLAALMRKVGPFRLELKPLLSPFEALAESIVYQQLHGRAAAAIFARLCE 77
Query: 188 LCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGIL-SDSAIVNMDDKSL 246
G G+ PE +LA LR GVSG KA+ L DLA K + G + S + + + D++L
Sbjct: 78 RVGSGTGLTPEALLATPDDALRAAGVSGPKAAALKDLAEKTRAGTVPSLAQVRRLSDEAL 137
Query: 247 FTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCE 306
+ V GIG W+V M +IF L RPDVLP++D +RKG L L+E PRP ++ E
Sbjct: 138 IERFSAVRGIGQWTVEMLLIFRLGRPDVLPVDDYAIRKGFMFLQGLKESPRPREVLAYGE 197
Query: 307 KWRPYRSVASWYLWRFVE 324
+WRP+RSVASWYLWR +E
Sbjct: 198 RWRPWRSVASWYLWRSLE 215
>gi|338529870|ref|YP_004663204.1| putative DNA-3-methyladenine glycosylase [Myxococcus fulvus HW-1]
gi|337255966|gb|AEI62126.1| putative DNA-3-methyladenine glycosylase [Myxococcus fulvus HW-1]
Length = 244
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 111/198 (56%), Gaps = 3/198 (1%)
Query: 130 AAIRHLRNADRQLASLIDIHPPPTFDS--FHTPFLALTRSILYQQLAFKAGTSIYTRFIA 187
A R L AD L +L+ P H+PF AL SI+YQQL KA +I+ R
Sbjct: 38 AVRRALTRADPTLGALMKRVGPFRLQVRPLHSPFGALAESIVYQQLHGKAAATIFGRVCE 97
Query: 188 LCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVN-MDDKSL 246
G PE +LA+ LR+ G+S K + L DLARK +G + A V MDD L
Sbjct: 98 RVGSGRKFTPEALLAVPDTSLREAGLSANKLAALQDLARKTLSGTVPPLAKVRRMDDAEL 157
Query: 247 FTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCE 306
T V GIG W+V M ++F L RPDVLP++D GVRKG Y L E+P+P + E
Sbjct: 158 IEHFTQVRGIGQWTVEMLLMFQLERPDVLPVDDYGVRKGFMRAYGLPEMPKPKALLAYGE 217
Query: 307 KWRPYRSVASWYLWRFVE 324
+WRP+RSVASWY+WR E
Sbjct: 218 RWRPWRSVASWYMWRSAE 235
>gi|405372134|ref|ZP_11027398.1| DNA-3-methyladenine glycosylase II [Chondromyces apiculatus DSM
436]
gi|397088507|gb|EJJ19488.1| DNA-3-methyladenine glycosylase II [Myxococcus sp. (contaminant ex
DSM 436)]
Length = 224
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/169 (47%), Positives = 100/169 (59%), Gaps = 1/169 (0%)
Query: 157 FHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGR 216
H+PF AL SI+YQQL KA +I+ R G PE +LA+ LR+ G+S
Sbjct: 51 LHSPFGALAESIVYQQLHGKAAATIFGRVCERVGSGKKFTPEALLAVPETSLREAGLSAN 110
Query: 217 KASYLHDLARKYQNGILSDSAIVN-MDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVL 275
K + L DLARK G + A V MDD L T V GIG W+V M ++F L RPDVL
Sbjct: 111 KLAALLDLARKTHEGTVPTLAKVRRMDDAELIEHFTQVRGIGQWTVEMLLMFQLERPDVL 170
Query: 276 PINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
P++D GVRKG Y L E+P+P + E+WRP+RSVASWYLWR E
Sbjct: 171 PVDDFGVRKGFMKAYGLPEMPKPKALLAYGERWRPWRSVASWYLWRASE 219
>gi|114328005|ref|YP_745162.1| DNA-3-methyladenine glycosylase II [Granulibacter bethesdensis
CGDNIH1]
gi|114316179|gb|ABI62239.1| DNA-3-methyladenine glycosylase II [Granulibacter bethesdensis
CGDNIH1]
Length = 255
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 88/213 (41%), Positives = 121/213 (56%), Gaps = 5/213 (2%)
Query: 122 LSSEGEVEAAIRHLRNADRQLASLIDIHPPP--TFDSFHTPFLALTRSILYQQLAFKAGT 179
LS + E A HL D+ L++LI PP T +PF AL R+I +QQL +A
Sbjct: 24 LSCPAQTEEACAHLARQDKALSALITRVGPPRLTISLEQSPFEALIRAIAHQQLHARAAE 83
Query: 180 SIYTRFIALCGGEAGV-VPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSD-SA 237
+I RF+AL P ++AL + LRQ G SG K L + Q GI+ D S
Sbjct: 84 AILARFLALFPVNTDFPSPLEIMALDTETLRQCGFSGTKIIALRGVCEAAQGGIIPDRSG 143
Query: 238 IVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPR 297
+DD++L LT + GIG W+V M MIF+L R D+LP++D GVR+G +L+ LE PR
Sbjct: 144 CTALDDETLIQRLTTLRGIGRWTVEMLMIFTLGRTDILPVDDFGVREGWRLIKGLESQPR 203
Query: 298 PSQMDQLCEKWRPYRSVASWYLWRFV-EAKGAP 329
P + + + W P+RS+A+WYLWR EAK P
Sbjct: 204 PKILADIGQSWSPWRSLAAWYLWRAADEAKKIP 236
>gi|443320599|ref|ZP_21049689.1| HhH-GPD superfamily base excision DNA repair protein [Gloeocapsa
sp. PCC 73106]
gi|442789670|gb|ELR99313.1| HhH-GPD superfamily base excision DNA repair protein [Gloeocapsa
sp. PCC 73106]
Length = 206
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 116/191 (60%), Gaps = 3/191 (1%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
AI +L + DR +A LI +P T + F LTR+I+ QQ++ K+ +I+ RF +L
Sbjct: 10 AIAYLGSRDRIMAELISTYPAETLQNQDNAFYTLTRAIVGQQISVKSADAIWQRFASLLD 69
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
PE L L P LRQ G+S +K Y+ ++A +Q G+L+ A M D+ + L
Sbjct: 70 S---FTPEAYLQLEPDCLRQCGLSRQKVEYMRNIALAWQQGLLTPVAWDKMSDQEIAKQL 126
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRP 310
+ GIG+W+ MF+IF LHRPD+LP+ D+G+ K +QL Y +L +Q+ ++ W+P
Sbjct: 127 MGIRGIGTWTAEMFLIFHLHRPDILPLGDIGLIKAIQLHYGQNQLLSKAQILEIARMWQP 186
Query: 311 YRSVASWYLWR 321
YR+VA+WYLWR
Sbjct: 187 YRTVATWYLWR 197
>gi|67923577|ref|ZP_00517050.1| DNA-3-methyladenine glycosylase II [Crocosphaera watsonii WH 8501]
gi|67854603|gb|EAM49889.1| DNA-3-methyladenine glycosylase II [Crocosphaera watsonii WH 8501]
Length = 206
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 118/191 (61%), Gaps = 3/191 (1%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A +LR+ D LA +I ++P T ++H FL L ++I+ QQ++ A +I R +L G
Sbjct: 10 AKEYLRSNDAILADIIALYPSETMINYHDAFLTLVKAIIGQQISVSAANAINQRVESLLG 69
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
+ PE L PQ LR+ G+S +K +Y+ ++ + +++GIL+ A M DK++ L
Sbjct: 70 E---ITPENYLETDPQLLRKCGLSRQKIAYITNITQGFKDGILTPQAWSEMTDKAVIAQL 126
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRP 310
T + GIG W+ MF+IF LHR D+ P+ DLG+ +QL Y E+ ++ +L ++W+P
Sbjct: 127 TSIKGIGPWTAQMFLIFHLHRRDIFPLADLGLINAIQLHYGSEKALSKGEIKELSQRWKP 186
Query: 311 YRSVASWYLWR 321
YR+VA+WYLWR
Sbjct: 187 YRTVATWYLWR 197
>gi|162449176|ref|YP_001611543.1| methylated-DNA--protein-cysteine methyltransferase [Sorangium
cellulosum So ce56]
gi|161159758|emb|CAN91063.1| methylated-DNA--protein-cysteine methyltransferase [Sorangium
cellulosum So ce56]
Length = 395
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/204 (43%), Positives = 123/204 (60%), Gaps = 5/204 (2%)
Query: 130 AAIRHLRNADRQLASLIDIHPPPTF--DSFHTPFLALTRSILYQQLAFKAGTSIYTRFIA 187
AA+ HLR +D LA +ID P D + FLAL SI+YQQL KA +I+ R A
Sbjct: 192 AAVEHLRASDAALARVIDAVGPFAMRIDRTSSLFLALAESIVYQQLTGKAAATIFARVRA 251
Query: 188 LC-GGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVN-MDDKS 245
L G P +L + ++LR G+S K L DLARK ++G L A V+ M+D++
Sbjct: 252 LFPRAHEGPTPAQLLRASDEKLRGAGLSQAKLLALRDLARKTEDGELPTLAEVHGMEDEA 311
Query: 246 LFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLC 305
+ LT V GIG W+V M ++F L RPDVLP++D G+RKG L + E P + +++
Sbjct: 312 IIERLTRVRGIGRWTVEMLLMFRLGRPDVLPVDDYGIRKGFALAFKRPEPPARADLEKRG 371
Query: 306 EKWRPYRSVASWYLWRFVE-AKGA 328
+W+PYR+VASWYLWR V+ A+G
Sbjct: 372 ARWKPYRTVASWYLWRAVDLARGG 395
>gi|416375171|ref|ZP_11683305.1| DNA-3-methyladenine glycosylase II [Crocosphaera watsonii WH 0003]
gi|357266559|gb|EHJ15168.1| DNA-3-methyladenine glycosylase II [Crocosphaera watsonii WH 0003]
Length = 211
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 118/191 (61%), Gaps = 3/191 (1%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A +LR+ D LA +I ++P T ++H FL L ++I+ QQ++ A +I R +L G
Sbjct: 15 AKEYLRSNDAILADIIALYPSETMINYHDAFLTLVKAIIGQQISVSAANAINQRVESLLG 74
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
+ PE L PQ LRQ G+S +K +Y+ ++ + +++GIL+ +M DK++ L
Sbjct: 75 E---ITPENYLETDPQLLRQCGLSRQKIAYITNITQGFKDGILTPQTWSDMTDKAVIDQL 131
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRP 310
T + GIG W+ MF+IF LHR D+ P+ DLG+ +QL Y E+ ++ +L ++W+P
Sbjct: 132 TSIKGIGPWTAQMFLIFHLHRRDIFPLADLGLINAIQLHYGSEKALSKGEIKELSQRWKP 191
Query: 311 YRSVASWYLWR 321
YR+VA+WYLWR
Sbjct: 192 YRTVATWYLWR 202
>gi|224824974|ref|ZP_03698080.1| HhH-GPD family protein [Pseudogulbenkiania ferrooxidans 2002]
gi|224602645|gb|EEG08822.1| HhH-GPD family protein [Pseudogulbenkiania ferrooxidans 2002]
Length = 205
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 118/198 (59%), Gaps = 3/198 (1%)
Query: 127 EVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFI 186
E +AA L AD +A LI P + PF L R+I+ QQ++ KA +I++R
Sbjct: 5 EWQAACEGLAEADPVMAGLIACFPGSRLVTRGQPFETLLRAIVGQQISLKAADAIWSRLS 64
Query: 187 ALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSL 246
A+ ++ P+++LA + LRQ G+S RKA Y+ DLAR + +G + + + D+ +
Sbjct: 65 AMVRCDS---PDSILAASVDALRQAGLSARKADYVQDLARHFADGRIDPQSFPALGDEDI 121
Query: 247 FTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCE 306
L V GIG W+ MF+IF L RPDV I+D+G+++ V LY P P+ + +L E
Sbjct: 122 IRELVAVRGIGRWTAEMFLIFHLARPDVWAIDDIGLQRAVSGLYLDGLRPTPAALRELGE 181
Query: 307 KWRPYRSVASWYLWRFVE 324
+WRP+RSVASWYLWR VE
Sbjct: 182 RWRPWRSVASWYLWRHVE 199
>gi|194690146|gb|ACF79157.1| unknown [Zea mays]
Length = 121
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 65/86 (75%), Positives = 78/86 (90%)
Query: 241 MDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQ 300
MDD+SL MLTMV GIG+WSVHMFMIFSL RPDVLP DLGVRKGVQ+LY+L+++PRPSQ
Sbjct: 1 MDDRSLAAMLTMVKGIGAWSVHMFMIFSLARPDVLPSADLGVRKGVQMLYALQDVPRPSQ 60
Query: 301 MDQLCEKWRPYRSVASWYLWRFVEAK 326
MD+LCE+WRPYRSV +WY+WR +E+K
Sbjct: 61 MDRLCERWRPYRSVGAWYMWRLIESK 86
>gi|300866658|ref|ZP_07111344.1| Base excision DNA repair protein, HhH-GPD family [Oscillatoria sp.
PCC 6506]
gi|300335332|emb|CBN56504.1| Base excision DNA repair protein, HhH-GPD family [Oscillatoria sp.
PCC 6506]
Length = 207
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 119/197 (60%), Gaps = 3/197 (1%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTP---FLALTRSILYQQLAFKAGTSIYTRFIA 187
AI +L+++D L LID + F L++SIL+QQL+ K I+ RF+
Sbjct: 6 AIDYLKDSDPILGQLIDQVGGCQLNQRELEGDLFFCLSQSILHQQLSTKVAKVIHARFLQ 65
Query: 188 LCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLF 247
L + + VL + LRQ+G+S K SYL DLAR G+ + + MDD+S+
Sbjct: 66 LYANTQFPLAQDVLDTPDEVLRQVGISRPKISYLKDLARHAIEGLPTIEELEIMDDESII 125
Query: 248 TMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEK 307
LT V GIG WSV MF+IF L+R DVLP++DLG+R G++ LY L+ LP ++L +K
Sbjct: 126 KNLTRVKGIGRWSVQMFLIFRLNRWDVLPVDDLGIRSGIRKLYGLDALPDRKTTERLGQK 185
Query: 308 WRPYRSVASWYLWRFVE 324
W+PY S+ASWYLWR +E
Sbjct: 186 WKPYCSIASWYLWRSLE 202
>gi|428208141|ref|YP_007092494.1| HhH-GPD family protein [Chroococcidiopsis thermalis PCC 7203]
gi|428010062|gb|AFY88625.1| HhH-GPD family protein [Chroococcidiopsis thermalis PCC 7203]
Length = 244
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 129/213 (60%), Gaps = 8/213 (3%)
Query: 127 EVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTP---FLALTRSILYQQLAFKAGTSIYT 183
+ AI L +D LA+LI D F +L+++I++QQL+ K+ T+I+
Sbjct: 2 DYSVAIAALTKSDPILATLIHQVGTCRLDRVQQTGDLFFSLSKAIIHQQLSTKSATAIHQ 61
Query: 184 RFIALCGGEAGVVPETVLAL-TPQQ-LRQIGVSGRKASYLHDLARKYQNGILSDSAIVNM 241
RF+ + + +P + L TP + LR +G+S K YL DLA K NG+ + + + M
Sbjct: 62 RFLKISPAQ---LPSALDILNTPDEVLRGVGISRPKIVYLKDLAAKVTNGLPTIAELELM 118
Query: 242 DDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQM 301
DD+++ LT V GIG W+V M +IF LHR DVLPI+DLG+R GV+ +Y+L ELP +
Sbjct: 119 DDETIVQTLTQVKGIGRWTVQMLLIFRLHRWDVLPIDDLGIRAGVRKVYNLAELPHRKTV 178
Query: 302 DQLCEKWRPYRSVASWYLWRFVEAKGAPSSAAA 334
+QL ++W+PY ++ASWYLWR +E A S +
Sbjct: 179 EQLGQQWKPYCTIASWYLWRSLEQLSANSDQSG 211
>gi|347540411|ref|YP_004847836.1| HhH-GPD family protein [Pseudogulbenkiania sp. NH8B]
gi|345643589|dbj|BAK77422.1| HhH-GPD family protein [Pseudogulbenkiania sp. NH8B]
Length = 205
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 118/198 (59%), Gaps = 3/198 (1%)
Query: 127 EVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFI 186
E +AA L AD +A LI P + PF L R+I+ QQ++ KA +I++R
Sbjct: 5 EWQAACEGLAEADPVMAGLIARFPGSRLVTRGQPFETLLRAIVGQQISLKAADAIWSRLS 64
Query: 187 ALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSL 246
A+ ++ P+++LA + LRQ G+S RKA Y+ DLAR + +G + + + D+ +
Sbjct: 65 AMVRCDS---PDSILAASVDGLRQAGLSARKADYVQDLARHFADGRIDPQSFPALGDEDI 121
Query: 247 FTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCE 306
L V GIG W+ MF+IF L RPDV I+D+G+++ V LY P P+ + +L E
Sbjct: 122 IRELVAVRGIGRWTAEMFLIFHLARPDVWAIDDIGLQRAVSGLYLDGLRPTPAALRELGE 181
Query: 307 KWRPYRSVASWYLWRFVE 324
+WRP+RSVASWYLWR VE
Sbjct: 182 RWRPWRSVASWYLWRHVE 199
>gi|406834601|ref|ZP_11094195.1| HhH-GPD family protein [Schlesneria paludicola DSM 18645]
Length = 217
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 113/202 (55%), Gaps = 1/202 (0%)
Query: 127 EVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFI 186
++EAAIRHL++AD + SLID P T F L RSIL QQ++ KA SI R
Sbjct: 7 KIEAAIRHLKSADPIMNSLIDRAGPFTLKLNRDRFGMLVRSILSQQISTKAARSIRMRLD 66
Query: 187 ALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSL 246
L + E ++ +T QLR G+S +K SYL DL+ G L I + D+
Sbjct: 67 ELLK-PGRLSAEAIINVTEDQLRSAGLSRQKVSYLRDLSTCVLEGRLRLERIGRLSDEDA 125
Query: 247 FTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCE 306
L V GIG W+ MF+IFSL R DV P +DL +R ++ LY L+ELP + ++
Sbjct: 126 IEQLIQVKGIGRWTAQMFLIFSLGRLDVFPHDDLIIRSSIKELYELDELPNKQRSHEIAA 185
Query: 307 KWRPYRSVASWYLWRFVEAKGA 328
W+PY SVA+WY WR ++ K A
Sbjct: 186 AWKPYSSVATWYCWRLLDVKAA 207
>gi|383759016|ref|YP_005438001.1| DNA-3-methyladenine glycosylase II AlkA [Rubrivivax gelatinosus
IL144]
gi|381379685|dbj|BAL96502.1| DNA-3-methyladenine glycosylase II AlkA [Rubrivivax gelatinosus
IL144]
Length = 218
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 112/192 (58%), Gaps = 1/192 (0%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A RHL DR + LI +S F L RSI+ QQ++ KA S++ +F AL
Sbjct: 18 ACRHLSRRDRVMKKLIPRFGEARLESRGDAFTTLARSIVGQQISVKAAQSVWNKFSALVE 77
Query: 191 GEAG-VVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTM 249
G A + P+ V AL P +R G+S RK YL DLAR + +G + + MDD+++
Sbjct: 78 GPATHLAPQAVNALDPLTMRAAGLSARKTEYLLDLARHFVDGTVHVADWQQMDDEAIIAE 137
Query: 250 LTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWR 309
L + GIG W+ MF+IF L RP+VLP++DLG+ KG+ L Y E ++ ++ E W
Sbjct: 138 LVAIRGIGRWTAEMFLIFHLMRPNVLPLDDLGLLKGISLNYFSGEPVSRAEAREVGEAWA 197
Query: 310 PYRSVASWYLWR 321
PYRSVA+WY+WR
Sbjct: 198 PYRSVATWYIWR 209
>gi|409359152|ref|ZP_11237504.1| methylated-DNA--protein-cysteine methyltransferase [Dietzia
alimentaria 72]
Length = 212
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 115/205 (56%), Gaps = 6/205 (2%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTF----DSF-HTPFLALTRSILYQQLAFKAGTSIYT 183
E A+RHLR AD QL ID P T D+ HT F L S++ QQL+ KA +I
Sbjct: 8 EVAVRHLRGADAQLRDFIDAAGPCTLTPAPDAGPHTLFDRLAGSVMSQQLSVKAAATISG 67
Query: 184 RFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNG-ILSDSAIVNMD 242
R + + P V AL+ ++LR G+S K + L DLA + G I + + D
Sbjct: 68 RLRERATSGSQLDPALVAALSDEELRACGISRPKVASLRDLADAVETGRIPTLPELRKYD 127
Query: 243 DKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMD 302
D + T LT V GIG W+V M +IF L RPDV P+ D+GVR+G++ + L E P+ M
Sbjct: 128 DDKVITSLTAVRGIGRWTVEMLLIFLLDRPDVFPVADVGVRRGLERVLGLSEKASPALML 187
Query: 303 QLCEKWRPYRSVASWYLWRFVEAKG 327
+ + W PYRSVASWYLWR V+ G
Sbjct: 188 ERSQAWAPYRSVASWYLWRAVDQAG 212
>gi|384494008|gb|EIE84499.1| hypothetical protein RO3G_09209 [Rhizopus delemar RA 99-880]
Length = 195
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 105/171 (61%), Gaps = 9/171 (5%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV---PETVLALTPQQLRQIGVSGR 216
PF +L R+I+YQQ+ KA +SIYTRF+ L E+ + P VL + ++LR G+S R
Sbjct: 17 PFRSLVRAIVYQQIHGKAASSIYTRFLKLFDKESEDLFPTPLEVLEKSVEELRSAGLSTR 76
Query: 217 KASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLP 276
KA Y+ DLA K+ N +++ +M D+ + + L V GIG W+ MF++F LH PDVLP
Sbjct: 77 KAEYIRDLAEKFNNKLITPEKFNSMSDQEISSQLCTVKGIGQWTADMFLMFDLHHPDVLP 136
Query: 277 INDLGVRKGVQLLYSL------EELPRPSQMDQLCEKWRPYRSVASWYLWR 321
+ DL +RKGV + L + P QM+QL + WRPYRS+ W LW+
Sbjct: 137 VGDLAIRKGVAKHFGLVIPNSKKAFPTLEQMEQLTQIWRPYRSLGCWLLWK 187
>gi|334341767|ref|YP_004546747.1| HhH-GPD family protein [Desulfotomaculum ruminis DSM 2154]
gi|334093121|gb|AEG61461.1| HhH-GPD family protein [Desulfotomaculum ruminis DSM 2154]
Length = 210
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 116/190 (61%), Gaps = 2/190 (1%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A+++L +D +LA+LI T F +L R+I+ QQL+ KA +I+ R + LCG
Sbjct: 14 AVQYLMASDARLAALIKEIGDYTLVLREDYFASLARAIIGQQLSVKAVETIWMRTVHLCG 73
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
G+ G PE++ LT +QL+ G+S K SYL DL +K G L I ++ D+ + T L
Sbjct: 74 GQVG--PESLTELTEEQLQGAGLSKAKVSYLWDLQQKILAGELCFKEICHLSDEEVVTAL 131
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRP 310
T V GIG W+ MF+IFSL R +V ++D+G+R+ V+ LY L+E P ++M +W P
Sbjct: 132 TRVKGIGRWTAEMFLIFSLGRSNVWAVDDVGLRRAVKWLYRLDETPTGNEMKSYGTRWSP 191
Query: 311 YRSVASWYLW 320
Y SVAS YLW
Sbjct: 192 YSSVASLYLW 201
>gi|302035445|ref|YP_003795767.1| DNA-3-methyladenine glycosylase [Candidatus Nitrospira defluvii]
gi|300603509|emb|CBK39839.1| DNA-3-methyladenine glycosylase [Candidatus Nitrospira defluvii]
Length = 225
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 101/165 (61%), Gaps = 1/165 (0%)
Query: 158 HTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRK 217
+PF +L R+I YQQL KA SI RFIAL G P +LA+ P+ +R G S K
Sbjct: 36 RSPFESLARAIAYQQLHDKAAESILKRFIALFPGRRFPRPADLLAMAPETIRGTGFSRAK 95
Query: 218 ASYLHDLARKYQNGILSDSAIV-NMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLP 276
+ L DLA K +G + +A++ + D ++ L V G+G W+V M +IF L RPDVLP
Sbjct: 96 IAALQDLAAKAMDGTVPTTAVIQRLADDAIVERLIAVRGVGRWTVEMLLIFQLGRPDVLP 155
Query: 277 INDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
++D GVR G ++ Y + +P P ++ E+WRPYR+ A+WYLWR
Sbjct: 156 VDDFGVRNGFRIAYKRKAMPTPKELLVYGERWRPYRTAAAWYLWR 200
>gi|434404747|ref|YP_007147632.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Cylindrospermum stagnale PCC 7417]
gi|428259002|gb|AFZ24952.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Cylindrospermum stagnale PCC 7417]
Length = 249
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 107/164 (65%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASY 220
F +L+R+ILYQQL+ K+ +I+ RF+ L + PE +L LR +G+S K Y
Sbjct: 85 FFSLSRAILYQQLSGKSAAAIHRRFLELYAEQPFPTPEAILNTPDAILRGVGISRPKIVY 144
Query: 221 LHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDL 280
L DL++K +G+ S + + M+D+++ LT V GIG W+V M +IF LHR DVLP++DL
Sbjct: 145 LKDLSQKIIDGLPSLAELEVMEDEAIIQTLTQVKGIGRWTVQMMLIFRLHRLDVLPVDDL 204
Query: 281 GVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
GVR G++ LY+L ELP ++ KW+PY +VASWYLW+ E
Sbjct: 205 GVRSGIRRLYALPELPDKKTVEHFGLKWKPYCTVASWYLWQSAE 248
>gi|332526280|ref|ZP_08402409.1| HhH-GPD family protein [Rubrivivax benzoatilyticus JA2]
gi|332110114|gb|EGJ10742.1| HhH-GPD family protein [Rubrivivax benzoatilyticus JA2]
Length = 218
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 111/192 (57%), Gaps = 1/192 (0%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A RHL DR + LI +S F L RSI+ QQ++ KA S++ +F AL
Sbjct: 18 ACRHLSRRDRVMKKLIPRFGEARLESRGDAFTTLARSIVGQQISVKAAQSVWNKFSALVD 77
Query: 191 GEAG-VVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTM 249
G A + P+ V L P +R G+S RK YL DLAR + +G + + MDD+++
Sbjct: 78 GPATHLAPQAVNTLDPLTMRAAGLSARKTEYLLDLARHFVDGTVHVADWQQMDDEAIIAE 137
Query: 250 LTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWR 309
L + GIG W+ MF+IF L RP+VLP++DLG+ KG+ L Y E ++ ++ E W
Sbjct: 138 LVAIRGIGRWTAEMFLIFHLMRPNVLPLDDLGLLKGISLNYFSGEPVSRAEAREVGEAWA 197
Query: 310 PYRSVASWYLWR 321
PYRSVA+WY+WR
Sbjct: 198 PYRSVATWYIWR 209
>gi|408403257|ref|YP_006861240.1| DNA-3-methyladenine glycosylase II [Candidatus Nitrososphaera
gargensis Ga9.2]
gi|408363853|gb|AFU57583.1| putative DNA-3-methyladenine glycosylase II [Candidatus
Nitrososphaera gargensis Ga9.2]
Length = 214
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 104/165 (63%), Gaps = 2/165 (1%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
PF +L +I+YQQLA A +IY RF+ + G P +LA +LR G+S RK
Sbjct: 46 PFQSLVEAIIYQQLAGSAADAIYGRFVKIYGRFPR--PAQLLATPDSKLRACGLSARKIE 103
Query: 220 YLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIND 279
YL DL+ + + L + + M D+ + L V GIG W+ MF+IF L RPDVLP+ D
Sbjct: 104 YLKDLSSQVSDDRLKLALLPKMPDEQVIEQLVQVKGIGRWTAEMFLIFCLGRPDVLPVGD 163
Query: 280 LGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
LG+RK +Q +YSL ELP P++M ++ + W+PY S+A+WY+W+ +E
Sbjct: 164 LGLRKAMQQVYSLAELPSPARMREIAQLWKPYSSIATWYMWKSLE 208
>gi|375105426|ref|ZP_09751687.1| HhH-GPD superfamily base excision DNA repair protein
[Burkholderiales bacterium JOSHI_001]
gi|374666157|gb|EHR70942.1| HhH-GPD superfamily base excision DNA repair protein
[Burkholderiales bacterium JOSHI_001]
Length = 217
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 111/192 (57%), Gaps = 1/192 (0%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A +HL DR + LI S F L RSI+ QQ++ KA S++ RF AL G
Sbjct: 17 ACKHLAKRDRVMKKLIPQFGEARLQSRGDAFTTLARSIVGQQISVKAAQSVWDRFAALVG 76
Query: 191 G-EAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTM 249
G + P+ VL LR+ G+S RKA YL DLAR +++G + MDD+++
Sbjct: 77 GPSTRIAPKAVLGHEVPALREAGLSARKAEYLTDLARHFESGAVHVKQWQQMDDEAIIEE 136
Query: 250 LTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWR 309
L + GIG W+ MF+IF L RP+V+P++DLG+ KG+ + Y E ++ ++ + W
Sbjct: 137 LVAIRGIGRWTAEMFLIFHLMRPNVMPLDDLGLIKGISVNYFSGESVSRAEAREVGDAWT 196
Query: 310 PYRSVASWYLWR 321
P+RSVA+WY+WR
Sbjct: 197 PFRSVATWYIWR 208
>gi|296134922|ref|YP_003642164.1| HhH-GPD family protein [Thiomonas intermedia K12]
gi|295795044|gb|ADG29834.1| HhH-GPD family protein [Thiomonas intermedia K12]
Length = 221
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 110/198 (55%), Gaps = 3/198 (1%)
Query: 127 EVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFI 186
+ + A HL+ DR + LI H S PF L RSI+ QQ++ KA +++ R
Sbjct: 21 DWDKACAHLQRTDRVMRKLIKTHAGTRLQSRGDPFQTLARSIIGQQISVKAAQTVWDR-- 78
Query: 187 ALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSL 246
LC V PE ++ L Q LR G+SGRKA Y+ DLA K+ G + M D+++
Sbjct: 79 -LCAAVPQVAPEHLVGLDDQALRACGLSGRKAGYVRDLAVKFHAGEVHPDQWQEMPDEAI 137
Query: 247 FTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCE 306
L + GIG W+ MF+IF L RPDVLP+ DLG+ KGV Y E S++ ++
Sbjct: 138 AAELLTIRGIGRWTADMFLIFHLMRPDVLPLGDLGLIKGVSQTYFAGEPVTQSEVREVAA 197
Query: 307 KWRPYRSVASWYLWRFVE 324
W P+RSV +WY+WR ++
Sbjct: 198 AWAPWRSVGTWYIWRSLD 215
>gi|125553453|gb|EAY99162.1| hypothetical protein OsI_21121 [Oryza sativa Indica Group]
Length = 137
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 63/86 (73%), Positives = 75/86 (87%)
Query: 241 MDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQ 300
MDD+S MLTMV GIG+WSVHMFMIFSL+RPDVLP DLGVRKGVQ LY L+ +PRPSQ
Sbjct: 1 MDDRSFAAMLTMVKGIGAWSVHMFMIFSLNRPDVLPAADLGVRKGVQHLYGLDAVPRPSQ 60
Query: 301 MDQLCEKWRPYRSVASWYLWRFVEAK 326
M++LCE+WRPYRSV +WY+WR +E+K
Sbjct: 61 MEKLCEQWRPYRSVGAWYMWRLIESK 86
>gi|94967733|ref|YP_589781.1| DNA-3-methyladenine glycosylase II [Candidatus Koribacter
versatilis Ellin345]
gi|94549783|gb|ABF39707.1| DNA-3-methyladenine glycosylase II [Candidatus Koribacter
versatilis Ellin345]
Length = 251
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/212 (41%), Positives = 118/212 (55%), Gaps = 17/212 (8%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTF--DSFHTPFLALTRSILYQQLAFKAGTSIYTRFI 186
E AI HL D++LA LI PP + F AL SI+YQQL+ KA +I R
Sbjct: 6 EKAIAHLSKVDKKLAKLIAKCPPCAIKPNYMQNVFEALMESIVYQQLSGKAAATILNRVK 65
Query: 187 ALC-----------GGEA--GVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGIL 233
AL G+A PE +LA + LR G+SG K + DLA K +G +
Sbjct: 66 ALYFPPDTPTHDTRHGKALPFPTPEQLLATPDETLRSAGLSGNKTKSVKDLAAKTIDGTV 125
Query: 234 SDSAIVN-MDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSL 292
D A + M D + LT V GIG W+V M ++F+L R DV P++DLGVRKG L+ +
Sbjct: 126 PDIATMKKMSDDEIINHLTQVRGIGRWTVEMILLFNLFRKDVWPVDDLGVRKGYGYLHGI 185
Query: 293 EELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
E+P+P ++ L E ++PYRSVA+WY+WR E
Sbjct: 186 -EMPKPKELMALGEVYKPYRSVAAWYMWRACE 216
>gi|410692435|ref|YP_003623056.1| putative DNA-3-methyladenine glycosylase II [Thiomonas sp. 3As]
gi|294338859|emb|CAZ87193.1| putative DNA-3-methyladenine glycosylase II [Thiomonas sp. 3As]
Length = 222
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 110/198 (55%), Gaps = 3/198 (1%)
Query: 127 EVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFI 186
+ + A HL+ DR + LI H S PF L RSI+ QQ++ KA +++ R
Sbjct: 22 DWDKACAHLQRTDRVMRKLIKTHAGTRLQSRGDPFQTLARSIIGQQISVKAAQTVWDR-- 79
Query: 187 ALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSL 246
LC V PE ++ L + LR G+SGRKA Y+ DLA K+ G + M D+++
Sbjct: 80 -LCAAVPQVAPEHLVGLDDEALRACGLSGRKAGYVRDLAVKFHAGEVHPDQWQEMPDEAI 138
Query: 247 FTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCE 306
L + GIG W+ MF+IF L RPDVLP+ DLG+ KGV Y E S++ ++
Sbjct: 139 AAELLTIRGIGRWTADMFLIFHLMRPDVLPLGDLGLIKGVSQTYFAGEPVTQSEVREVAA 198
Query: 307 KWRPYRSVASWYLWRFVE 324
W P+RSV +WY+WR ++
Sbjct: 199 AWAPWRSVGTWYIWRSLD 216
>gi|159478519|ref|XP_001697350.1| hypothetical protein CHLREDRAFT_105620 [Chlamydomonas reinhardtii]
gi|158274508|gb|EDP00290.1| predicted protein [Chlamydomonas reinhardtii]
Length = 179
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 74/165 (44%), Positives = 101/165 (61%), Gaps = 3/165 (1%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALC--GGEAGVVPETVLALTPQQLRQIGVSGRKA 218
F AL RS+ YQQLA KA ++I+ R + +C G A + P +LA P+ LR G+SGRK
Sbjct: 10 FSALARSVAYQQLATKAASTIWGRVLGVCQVGSTAALTPAHILAAPPEALRGAGLSGRKL 69
Query: 219 SYLHDLARKYQNGILSDSAIVNMDD-KSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPI 277
YL LA+ + + + + D +L LT + GIG W+VHM + L PDVLP
Sbjct: 70 EYLVGLAQAFSGRPGWEQELEALTDVDALVAQLTPLRGIGEWTVHMIAMMHLGLPDVLPT 129
Query: 278 NDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRF 322
DLGVR+G+QLLY L +LP Q++++ W PYRSV SWY+WR
Sbjct: 130 GDLGVRRGLQLLYGLRQLPDVRQVEEITAGWAPYRSVGSWYMWRI 174
>gi|220906068|ref|YP_002481379.1| DNA-3-methyladenine glycosylase II [Cyanothece sp. PCC 7425]
gi|219862679|gb|ACL43018.1| DNA-3-methyladenine glycosylase II [Cyanothece sp. PCC 7425]
Length = 186
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 108/164 (65%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASY 220
F L +ILYQQL+ KA +I+ RF+ L A E +L ++LR++G+S K Y
Sbjct: 20 FNCLAEAILYQQLSGKAAATIHGRFLQLYAPAAAPTAEDILNTAEEELRRVGISRSKVLY 79
Query: 221 LHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDL 280
L DLA+ NG+ + + +M+D+++ +LT + G+G W+V M +IF LHR +VLPI+DL
Sbjct: 80 LKDLAQHCLNGLPTIEELEDMEDETIIQVLTPIKGVGRWTVQMLLIFRLHRWNVLPIDDL 139
Query: 281 GVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
G+R ++ +Y L +LP +D+L + W+PYR++A+WYLWR ++
Sbjct: 140 GIRTALRQVYGLADLPDRKNVDRLGQPWQPYRTIATWYLWRSLD 183
>gi|325980945|ref|YP_004293347.1| HhH-GPD family protein [Nitrosomonas sp. AL212]
gi|325530464|gb|ADZ25185.1| HhH-GPD family protein [Nitrosomonas sp. AL212]
Length = 205
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 110/191 (57%), Gaps = 3/191 (1%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A + L D+ + LI S F L RSI+ QQ++ KA S++ + I G
Sbjct: 9 ATQELAGCDQVMQQLIQQFENAALISRGCAFTTLARSIVGQQISVKAAESVWQKII---G 65
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
+ P T+ A P LR G+S RK +YL DL+R + G L+++ V MDD+++ L
Sbjct: 66 AIPDIAPHTITAQEPDALRACGLSARKITYLQDLSRHFMEGKLNETGWVGMDDETIIAQL 125
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRP 310
+ + GIG W+ MF+IF L RPDVLP++D+G+++ + L Y ++ M +L W+P
Sbjct: 126 SKIKGIGRWTAEMFLIFHLQRPDVLPLDDIGLQRAISLHYFDKQTVDKKIMLELARPWQP 185
Query: 311 YRSVASWYLWR 321
+RSVA+WYLWR
Sbjct: 186 WRSVATWYLWR 196
>gi|163857763|ref|YP_001632061.1| hypothetical protein Bpet3450 [Bordetella petrii DSM 12804]
gi|163261491|emb|CAP43793.1| unnamed protein product [Bordetella petrii]
Length = 214
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 113/202 (55%), Gaps = 2/202 (0%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
E A+ HL DR L LI H + TPF+ L R+I+ QQ++ KAG +++ R +
Sbjct: 15 EEAVAHLMRRDRILKKLIPQHAEAWLTTRSTPFVTLARAIVGQQISNKAGDALWQRLLEA 74
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
G P VL LRQ G+S RK YL DLA + + MDD+S+ +
Sbjct: 75 VGKRP--TPAGVLGAGTPALRQAGLSQRKCEYLQDLAVHFGERRVHPEKWAAMDDESVVS 132
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
L + GIG W+ MF+IF+L RPDVLP++DLG+ K + L Y E + ++ W
Sbjct: 133 ELVAIRGIGRWTAEMFLIFNLQRPDVLPLDDLGLLKAISLHYFSGEPVSRFEAREVSSAW 192
Query: 309 RPYRSVASWYLWRFVEAKGAPS 330
+P+R+VA+WYLWR +E+K P+
Sbjct: 193 QPWRTVATWYLWRSLESKPVPN 214
>gi|429463246|ref|YP_007184709.1| DNA-3-methyladenine glycosylase [Candidatus Kinetoplastibacterium
crithidii (ex Angomonas deanei ATCC 30255)]
gi|451811302|ref|YP_007447757.1| DNA-3-methyladenine glycosylase II [Candidatus
Kinetoplastibacterium crithidii TCC036E]
gi|429338760|gb|AFZ83183.1| DNA-3-methyladenine glycosylase [Candidatus Kinetoplastibacterium
crithidii (ex Angomonas deanei ATCC 30255)]
gi|451776460|gb|AGF47459.1| DNA-3-methyladenine glycosylase II [Candidatus
Kinetoplastibacterium crithidii TCC036E]
Length = 207
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 113/196 (57%), Gaps = 2/196 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
E A+ L+ DR L +I + S PFL L R IL QQ++ KA +I+ +FI L
Sbjct: 14 EEAVSQLKKKDRILRKVIPLCEDKVLLSPSPPFLTLVRLILAQQISVKAAATIWNKFINL 73
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
G P+ + +++ + LR IGVS RK YL DLA + N + + MDD+S+ +
Sbjct: 74 VGESPN--PKLISSMSGELLRNIGVSKRKIDYLKDLADYFNNSSVCPEKWLKMDDESIIS 131
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
L+ + G+G W+ MF+IF++ RPD++P++D G+ K + Y E + ++ W
Sbjct: 132 ELSRIKGVGRWTAEMFLIFNMQRPDIMPLDDFGLLKAISTHYFSGEPVSRFEAREVSVAW 191
Query: 309 RPYRSVASWYLWRFVE 324
RP+R+VA+WYLWR +E
Sbjct: 192 RPWRTVATWYLWRSIE 207
>gi|335419362|ref|ZP_08550416.1| DNA-3-methyladenine glycosylase II [Salinisphaera shabanensis
E1L3A]
gi|335420966|ref|ZP_08551996.1| DNA-3-methyladenine glycosylase II [Salinisphaera shabanensis
E1L3A]
gi|334893140|gb|EGM31358.1| DNA-3-methyladenine glycosylase II [Salinisphaera shabanensis
E1L3A]
gi|334896848|gb|EGM34992.1| DNA-3-methyladenine glycosylase II [Salinisphaera shabanensis
E1L3A]
Length = 216
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/208 (39%), Positives = 117/208 (56%), Gaps = 3/208 (1%)
Query: 120 RPLSSEGEVEAAIRHLRNADRQLASLIDIHPP--PTFDSFHTPFLALTRSILYQQLAFKA 177
RP + + A+ HLR D L +L+D P P+ + F +L R+I+YQQL+ KA
Sbjct: 8 RPTRLMFDADTAVAHLRAVDPTLGALMDRCEPFAPSTTAAPDVFHSLVRAIVYQQLSGKA 67
Query: 178 GTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSD-S 236
+I+ R + GG + + LR G+S K L LA G L D S
Sbjct: 68 AGTIHRRLLDALGGGDTPGAQRIADADDAALRGAGLSQNKMLSLQALAAAQLAGELPDES 127
Query: 237 AIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELP 296
+ + DD L + + GIG W+V M ++F L RPDV+PI+DLGVRKG + Y EELP
Sbjct: 128 RLEDYDDAELIERYSAIRGIGRWTVEMLLLFHLGRPDVMPIHDLGVRKGYAITYGREELP 187
Query: 297 RPSQMDQLCEKWRPYRSVASWYLWRFVE 324
+P Q+++ CE WRPYRSV SW++WR +E
Sbjct: 188 KPKQLERECEIWRPYRSVGSWFMWRALE 215
>gi|257061458|ref|YP_003139346.1| HhH-GPD family protein [Cyanothece sp. PCC 8802]
gi|256591624|gb|ACV02511.1| HhH-GPD family protein [Cyanothece sp. PCC 8802]
Length = 206
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 116/194 (59%), Gaps = 4/194 (2%)
Query: 128 VEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIA 187
VEA +L + D+ LA LI ++P T ++H PF L ++I+ QQ++ A +I R +
Sbjct: 8 VEAK-EYLADKDKILAYLISLYPDETIINYHNPFYTLVKAIIGQQISVNAANAISKRLES 66
Query: 188 LCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLF 247
L G + ET LA+ + LRQ G+S K SY+ ++A+ ++ GIL+ M D+ +
Sbjct: 67 LLGT---ISIETYLAMDSEALRQCGLSRPKISYITNIAQAFEQGILTPQIWPMMSDQEVI 123
Query: 248 TMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEK 307
+ L + GIG W+ MF+IF LHR D+LP+ DLG+ +Q Y + ++ +L +
Sbjct: 124 SQLISIKGIGLWTAQMFLIFHLHRSDILPLADLGLINAIQRHYGQSQRLTKGEIQELSQA 183
Query: 308 WRPYRSVASWYLWR 321
W+PYR+VA+WYLWR
Sbjct: 184 WKPYRTVATWYLWR 197
>gi|254417495|ref|ZP_05031234.1| base excision DNA repair protein, HhH-GPD family [Coleofasciculus
chthonoplastes PCC 7420]
gi|196175679|gb|EDX70704.1| base excision DNA repair protein, HhH-GPD family [Coleofasciculus
chthonoplastes PCC 7420]
Length = 206
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 117/199 (58%), Gaps = 3/199 (1%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTP---FLALTRSILYQQLAFKAGTSIYTRFIA 187
AI L++ D L LID + F L+RSIL+QQL+ K I++RF+
Sbjct: 6 AIDFLQDCDPVLGQLIDRIGECQLNQHELEGDLFFCLSRSILHQQLSTKVAHVIHSRFLQ 65
Query: 188 LCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLF 247
+ + VL + LR +G+S K +YL DLAR +G+ + A+ MDD+S+
Sbjct: 66 VYPDTPFPTAQDVLDTPDEVLRGVGISRPKIAYLKDLARHSIDGLPTLEALEVMDDESII 125
Query: 248 TMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEK 307
+LT V GIG W+V M +IF L R DVLP++DLG+R G++ LY+LE LP + ++
Sbjct: 126 KILTQVKGIGCWTVQMLLIFRLKRWDVLPVDDLGIRTGIRNLYNLEALPDRKTTKRFGQR 185
Query: 308 WRPYRSVASWYLWRFVEAK 326
W+PY S+ASWYLWR ++ K
Sbjct: 186 WKPYCSIASWYLWRSLDLK 204
>gi|218247208|ref|YP_002372579.1| DNA-3-methyladenine glycosylase II [Cyanothece sp. PCC 8801]
gi|218167686|gb|ACK66423.1| DNA-3-methyladenine glycosylase II [Cyanothece sp. PCC 8801]
Length = 206
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 116/194 (59%), Gaps = 4/194 (2%)
Query: 128 VEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIA 187
VEA +L + D+ LA LI ++P T ++H PF L ++I+ QQ++ A +I R +
Sbjct: 8 VEAK-EYLADKDKILAYLISLYPDETIINYHNPFYTLVKAIIGQQISVNAANAISKRLES 66
Query: 188 LCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLF 247
L G + ET LA+ + LRQ G+S K SY+ ++A+ ++ GIL+ M D+ +
Sbjct: 67 LLGT---ISIETYLAMDSEALRQCGLSRPKISYITNIAQAFEQGILTPQIWPMMSDQEVI 123
Query: 248 TMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEK 307
+ L + GIG W+ MF+IF LHR D+LP+ DLG+ +Q Y + ++ +L +
Sbjct: 124 SQLISIKGIGLWTAQMFLIFHLHRSDILPLADLGLINAIQRHYGQSQRLTKGEIQELSQV 183
Query: 308 WRPYRSVASWYLWR 321
W+PYR+VA+WYLWR
Sbjct: 184 WKPYRTVATWYLWR 197
>gi|227115208|ref|ZP_03828864.1| putative DNA-3-methyladenine glycosylase [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
Length = 220
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 108/166 (65%), Gaps = 2/166 (1%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R++ YQQL +AG ++ + + + G+ PE +LA + LRQ G S RKA
Sbjct: 44 PYEALMRAVAYQQLTTRAGDAMVAKLLRV-HGDVFPTPEQILACSTDTLRQCGFSARKAD 102
Query: 220 YLHDLARKYQNGIL-SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
LH +A+ +G++ S DD +L LT + GIG W+V MF+I+SL R D++P++
Sbjct: 103 TLHGIAQGALSGLVPSLEQAAERDDDTLIQQLTSLKGIGRWTVEMFLIYSLERTDIMPLD 162
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
DLG+R+G++ +Y L+++P+P ++ L +PYR+VASWYLWR +E
Sbjct: 163 DLGIRQGLRYVYDLQDMPKPRELQALSLHCQPYRTVASWYLWRALE 208
>gi|163845842|ref|YP_001633886.1| DNA-3-methyladenine glycosylase II [Chloroflexus aurantiacus
J-10-fl]
gi|222523553|ref|YP_002568023.1| DNA-3-methyladenine glycosylase II [Chloroflexus sp. Y-400-fl]
gi|163667131|gb|ABY33497.1| DNA-3-methyladenine glycosylase II [Chloroflexus aurantiacus
J-10-fl]
gi|222447432|gb|ACM51698.1| DNA-3-methyladenine glycosylase II [Chloroflexus sp. Y-400-fl]
Length = 198
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 111/193 (57%), Gaps = 3/193 (1%)
Query: 128 VEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIA 187
+E A++HLRN D L I+ P T F L +I+ QQL+ A +I R
Sbjct: 1 MEHALQHLRNVDPTLGHWIEQIGPYTLQRQPHGFATLAYAIISQQLSLVAARTIRDRLNE 60
Query: 188 LCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLF 247
G A PET++A LR G+S +K+SYL DLA + +G L + + +DD++
Sbjct: 61 RLGSLA---PETIIAADETVLRAAGLSAQKSSYLRDLAERVMSGQLDLNLLPTLDDETAI 117
Query: 248 TMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEK 307
T L V GIG W+ ++++F+L R DVLP DLG+R V+L+Y LP+P ++ E+
Sbjct: 118 THLMTVKGIGRWTAEIYLMFALERLDVLPAADLGLRDAVRLIYDQPRLPKPQELRTFGER 177
Query: 308 WRPYRSVASWYLW 320
WRPYRS+A WYLW
Sbjct: 178 WRPYRSIACWYLW 190
>gi|302388846|ref|YP_003824667.1| HhH-GPD family protein [Thermosediminibacter oceani DSM 16646]
gi|302199474|gb|ADL07044.1| HhH-GPD family protein [Thermosediminibacter oceani DSM 16646]
Length = 218
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 112/190 (58%), Gaps = 3/190 (1%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A++ L AD ++A LI + + + F +L +SI+ QQL+ KA SI+ + LCG
Sbjct: 16 ALKALSKADEKMAYLIHLIGDYSLELEEDYFQSLVQSIVGQQLSMKAADSIWRKLQDLCG 75
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
V P +L+L+ +LR G+S +K Y+ DL+ K +GIL I +M D+ + L
Sbjct: 76 E---VTPARILSLSEDELRSAGLSKKKIEYIKDLSEKVLSGILDLDKIDSMADEEVIEAL 132
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRP 310
V GIG W+ MF+IFSL RPDV + DLG+++ V+ LY L + P + + ++W+P
Sbjct: 133 VRVKGIGRWTAEMFLIFSLGRPDVFSVADLGLQRAVKWLYGLSDWPDKKFLIECSQRWKP 192
Query: 311 YRSVASWYLW 320
YR+ AS YLW
Sbjct: 193 YRTAASLYLW 202
>gi|403057253|ref|YP_006645470.1| DNA-3-methyladenine glycosylase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402804579|gb|AFR02217.1| putative DNA-3-methyladenine glycosylase [Pectobacterium
carotovorum subsp. carotovorum PCC21]
Length = 220
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 107/166 (64%), Gaps = 2/166 (1%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R++ YQQL +AG ++ + + + G+ PE +LA + LRQ G S RKA
Sbjct: 44 PYEALMRAVAYQQLTTRAGDAMVAKLLRI-HGDVFPTPEQILACSTDTLRQCGFSARKAD 102
Query: 220 YLHDLARKYQNGIL-SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
LH +A+ +G++ S DD +L LT + GIG W+V MF+I+SL R D++P++
Sbjct: 103 TLHGIAQGALSGLVPSLEQAAERDDDTLIQQLTSLKGIGRWTVEMFLIYSLERTDIMPLD 162
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
DLG+R+G++ +Y L+++P+P + L +PYR+VASWYLWR +E
Sbjct: 163 DLGIRQGLRYVYDLQDMPKPRDLQALSLHCQPYRTVASWYLWRALE 208
>gi|227329145|ref|ZP_03833169.1| putative DNA-3-methyladenine glycosylase [Pectobacterium
carotovorum subsp. carotovorum WPP14]
Length = 220
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 108/166 (65%), Gaps = 2/166 (1%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R++ YQQL +AG ++ + + + G+ PE +LA + LRQ G S RKA
Sbjct: 44 PYEALMRAVAYQQLTTRAGDAMVAKLLRV-HGDVFPTPEQILACSTDTLRQCGFSARKAD 102
Query: 220 YLHDLARKYQNGIL-SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
LH +A+ +G++ S DD +L LT + GIG W+V MF+I+SL R D++P++
Sbjct: 103 TLHGIAQGALSGLVPSLEQAAERDDDTLIQQLTSLKGIGRWTVEMFLIYSLERTDIMPLD 162
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
DLG+R+G++ +Y L+++P+P + L + +PYR+VASWYLWR +E
Sbjct: 163 DLGIRQGLRYVYDLQDMPKPRDLQALSLQCQPYRTVASWYLWRALE 208
>gi|325920815|ref|ZP_08182716.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Xanthomonas gardneri ATCC 19865]
gi|325548712|gb|EGD19665.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Xanthomonas gardneri ATCC 19865]
Length = 224
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 118/203 (58%), Gaps = 6/203 (2%)
Query: 127 EVEAAIRHLRNADRQLASLID----IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIY 182
+VEAA HL DR L + + I P P + P AL R+IL+QQL+ KA ++I
Sbjct: 9 DVEAAFAHLTRRDRALGAWMKRIGPIAPQPGWRKPFDPVDALARAILFQQLSGKAASTIV 68
Query: 183 TRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNG-ILSDSAIVNM 241
R + + G + +T+ + LR GVSG KA L DLAR+ G I S + M
Sbjct: 69 AR-VEVAIGAQRLHADTLARIDDAALRACGVSGNKALALRDLARRELEGEIPSLRKLAFM 127
Query: 242 DDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQM 301
+D+++ L V GIG W+V M ++F L RPD+LPI+DLGVRKG Q + E++P P ++
Sbjct: 128 EDEAIVEALIPVRGIGRWTVEMMLMFRLGRPDLLPIDDLGVRKGAQRVDKQEQMPTPKEL 187
Query: 302 DQLCEKWRPYRSVASWYLWRFVE 324
E+W PYRS A++YLW+ +
Sbjct: 188 AARGERWGPYRSYAAFYLWKIAD 210
>gi|50119849|ref|YP_049016.1| DNA-3-methyladenine glycosylase [Pectobacterium atrosepticum
SCRI1043]
gi|49610375|emb|CAG73819.1| putative DNA-3-methyladenine glycosylase [Pectobacterium
atrosepticum SCRI1043]
Length = 220
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 108/166 (65%), Gaps = 2/166 (1%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R++ YQQL +AG ++ + + + + PE +LA + LRQ G S RKA
Sbjct: 44 PYEALMRAVAYQQLTTRAGDAMVAKLLRV-HDDVFPSPEQMLACSTDTLRQCGFSARKAD 102
Query: 220 YLHDLARKYQNGIL-SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
LH +A+ +G++ S NMDD +L LT + GIG W+V MF+I+SL R D++P++
Sbjct: 103 TLHGIAQGALSGLVPSLERAANMDDDTLIQQLTSLKGIGRWTVEMFLIYSLERTDIMPLD 162
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
DLG+R+G++ +Y L ++P+P + L + +PYR+VASWYLWR +E
Sbjct: 163 DLGIRQGLRYVYDLPDMPKPRDLQALSLQCQPYRTVASWYLWRSLE 208
>gi|78046820|ref|YP_362995.1| DNA-3-methyladenine glycosylase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78035250|emb|CAJ22895.1| DNA-3-methyladenine glycosylase [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 224
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 122/210 (58%), Gaps = 7/210 (3%)
Query: 121 PLSSEG-EVEAAIRHLRNADRQLASLID----IHPPPTFDSFHTPFLALTRSILYQQLAF 175
P + G +VEAA H+ DR L + + I P P + P AL R+IL+QQL+
Sbjct: 2 PCHARGFDVEAAFAHVSRRDRALGAWMKRIGPIAPQPGWHKPFDPVDALARAILFQQLSG 61
Query: 176 KAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNG-ILS 234
KA ++I R + + G + +T+ + LR GVSG KA L DLAR+ + G I S
Sbjct: 62 KAASTIVAR-VEVAIGAQRLHADTLDRIDDAALRACGVSGNKALALRDLARREREGEIPS 120
Query: 235 DSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEE 294
+ MD+ ++ L V GIG W+V M ++F L RPD+LPI+DLGVRKG Q + E+
Sbjct: 121 LRRLAFMDEDAIVQALVPVRGIGRWTVEMMLMFRLGRPDLLPIDDLGVRKGAQRVDKQEQ 180
Query: 295 LPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
+P PS++ E+W PYR+ A++YLW+ +
Sbjct: 181 MPTPSELAARGERWGPYRTYAAFYLWKIAD 210
>gi|223936549|ref|ZP_03628460.1| DNA-3-methyladenine glycosylase II [bacterium Ellin514]
gi|223894713|gb|EEF61163.1| DNA-3-methyladenine glycosylase II [bacterium Ellin514]
Length = 197
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 112/188 (59%), Gaps = 3/188 (1%)
Query: 137 NADRQLASLIDIHPPPTFD--SFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAG 194
D+ LA+LI+ P + TPF AL +S+ YQQL A +I+ RF AL
Sbjct: 2 KVDKTLAALINRVGPCAWKPTKRRTPFEALVQSVAYQQLNGLAAATIFGRFKALYPKTRF 61
Query: 195 VVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDS-AIVNMDDKSLFTMLTMV 253
P+ +L ++LR G+S K + + D+A K GI+ +S +I +D+ ++ + LT +
Sbjct: 62 PTPQAILETPDERLRTAGLSRAKVAAIKDIAAKTVEGIVPNSRSIARLDNSTIISQLTTI 121
Query: 254 NGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRS 313
GIG+W+V M +IF L R DVLP D VRKG + Y +LP+P+++ + E WRPYR+
Sbjct: 122 RGIGTWTVEMLLIFKLGRLDVLPTTDYAVRKGFAVTYGWNDLPKPAELLKHGEIWRPYRT 181
Query: 314 VASWYLWR 321
VASWYLWR
Sbjct: 182 VASWYLWR 189
>gi|311107716|ref|YP_003980569.1| hhH-GPD superfamily base excision DNA repair family protein
[Achromobacter xylosoxidans A8]
gi|310762405|gb|ADP17854.1| hhH-GPD superfamily base excision DNA repair family protein
[Achromobacter xylosoxidans A8]
Length = 214
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 114/196 (58%), Gaps = 2/196 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
EAA+ HL DR L +I HP S TPF+ L R+I+ QQ++ KA +++T+FI
Sbjct: 15 EAAVAHLMRRDRILKKIIPQHPEVWLTSRGTPFVTLARAIIGQQVSSKAADTVWTQFIEA 74
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
G P VL + + LR G+S RKA Y+ DLA + + MDD+++ +
Sbjct: 75 VGKRP--TPVAVLRVGLEGLRAAGLSQRKAEYVLDLAVHFGERRVHPEKWAAMDDEAVIS 132
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GIG W+ MF+IF+L RPDVLP++D G+ K + L Y E + ++ W
Sbjct: 133 ELTAIRGIGRWTAEMFLIFNLQRPDVLPLDDPGLLKAISLHYFSGEPVSRFEAREVSLAW 192
Query: 309 RPYRSVASWYLWRFVE 324
+P+R+VA+WYLWR +E
Sbjct: 193 QPWRTVATWYLWRSLE 208
>gi|437999854|ref|YP_007183587.1| DNA-3-methyladenine glucosyllase II [Candidatus
Kinetoplastibacterium blastocrithidii (ex Strigomonas
culicis)]
gi|451812758|ref|YP_007449211.1| DNA-3-methyladenine glycosylase II [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
gi|429339088|gb|AFZ83510.1| DNA-3-methyladenine glucosyllase II [Candidatus
Kinetoplastibacterium blastocrithidii (ex Strigomonas
culicis)]
gi|451778727|gb|AGF49607.1| DNA-3-methyladenine glycosylase II [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
Length = 207
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 115/196 (58%), Gaps = 2/196 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
E A+ L+ DR L+ +I ++ F S +PF+ L +I+ QQ++ K ++ RF+ +
Sbjct: 13 EQAVSDLKKKDRILSRIIPLYSEKRFLSSDSPFITLAHAIISQQISSKLAGVVWDRFVKI 72
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
G P ++ +L IG+ RK YLHDLA + +S ++NMDD+S+ +
Sbjct: 73 FGRLPS--PRDLIFAKGGELNSIGIPKRKVEYLHDLAYHFYENKVSTEKLINMDDESIIS 130
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
L+ + GIG W+ MF+IF+L RPDV+P++D+G+ + + + Y E + ++ W
Sbjct: 131 ELSSIKGIGRWTAEMFLIFNLRRPDVMPLDDVGLIRAISIHYFSGEPVSRFEAREVSGAW 190
Query: 309 RPYRSVASWYLWRFVE 324
RP+R+VASWYLWR +E
Sbjct: 191 RPWRTVASWYLWRSIE 206
>gi|319950303|ref|ZP_08024222.1| putative DNA-3-methyladenine glycosylase [Dietzia cinnamea P4]
gi|319435995|gb|EFV91196.1| putative DNA-3-methyladenine glycosylase [Dietzia cinnamea P4]
Length = 212
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 118/212 (55%), Gaps = 10/212 (4%)
Query: 132 IRHLRNADRQLASLIDIHPPPTFDSF-----HTPFLALTRSILYQQLAFKAGTSIYTRFI 186
+R+LR+AD +L + I P T + HT F L SIL QQL+ KA +I R
Sbjct: 1 MRYLRDADPELGAHIGAVGPCTLAAAPDAGPHTLFDRLASSILSQQLSVKAAATIAGRLR 60
Query: 187 ALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNG-ILSDSAIVNMDDKS 245
+ P V L+ ++LR G+S K + L DLA + G I S +A+ DD
Sbjct: 61 ERATSAGQLDPVRVALLSDEELRACGISRPKVAALRDLADAVRTGRIPSLAALREYDDDE 120
Query: 246 LFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLC 305
+ LT V GIG W+V M +IF L RPDV P++D+GVR+G + + LEE P M +
Sbjct: 121 VVDALTTVRGIGRWTVEMQLIFLLDRPDVFPVSDVGVRRGFERVLGLEEKASPDLMLERA 180
Query: 306 EKWRPYRSVASWYLWRFVEAKG----APSSAA 333
+W PYRSVASWYLWR V+ G AP++A+
Sbjct: 181 RRWAPYRSVASWYLWRAVDQTGEAVPAPTAAS 212
>gi|289669201|ref|ZP_06490276.1| DNA-3-methyladenine glycosylase [Xanthomonas campestris pv.
musacearum NCPPB 4381]
Length = 224
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 117/203 (57%), Gaps = 6/203 (2%)
Query: 127 EVEAAIRHLRNADRQLASLID----IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIY 182
+VEAA HL DR L + + I P P + P AL R+IL+QQL+ KA ++I
Sbjct: 9 DVEAAFAHLARRDRALGAWMKRIGPISPQPGWRKPFDPVDALARAILFQQLSGKAASTIV 68
Query: 183 TRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNG-ILSDSAIVNM 241
R + + G + +T+ + LR GVSG KA L DLAR+ G I S + M
Sbjct: 69 AR-VEVAIGAQRLHADTLGRIDDAALRACGVSGNKALALRDLARRESAGEIPSLRRLAFM 127
Query: 242 DDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQM 301
DD ++ L V GIG W+V M ++F L RPD+LPI+DLGVRKG Q + E++P P ++
Sbjct: 128 DDNAIVDALVPVRGIGRWTVEMMLMFRLGRPDLLPIDDLGVRKGAQRVDKQEQMPTPKEL 187
Query: 302 DQLCEKWRPYRSVASWYLWRFVE 324
E+W PYR+ A++YLW+ +
Sbjct: 188 AVRGERWGPYRTYAAFYLWQIAD 210
>gi|253687190|ref|YP_003016380.1| DNA-3-methyladenine glycosylase II [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|251753768|gb|ACT11844.1| DNA-3-methyladenine glycosylase II [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 220
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 108/166 (65%), Gaps = 2/166 (1%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R++ YQQL +AG ++ + + + + PE +LA + LRQ G S RKA
Sbjct: 44 PYEALMRAVAYQQLTTRAGDAMVAKLLRV-HDDVFPSPEQMLACSTDTLRQCGFSARKAD 102
Query: 220 YLHDLARKYQNGIL-SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
LH +A+ +G++ S MDD +L LT + GIG W+V MF+I+SL R D++P++
Sbjct: 103 TLHGIAQGALSGLVPSLERAAEMDDDTLIQQLTSLKGIGRWTVEMFLIYSLERTDIMPLD 162
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
DLG+R+G++ +Y L+++P+P + L + +PYR+VASWYLWR +E
Sbjct: 163 DLGIRQGLRYVYDLQDMPKPRDLQALSLQCQPYRTVASWYLWRSLE 208
>gi|359799492|ref|ZP_09302053.1| DNA-3-methyladenine glycosylase [Achromobacter arsenitoxydans SY8]
gi|359362596|gb|EHK64332.1| DNA-3-methyladenine glycosylase [Achromobacter arsenitoxydans SY8]
Length = 214
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 113/196 (57%), Gaps = 2/196 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
EAA+ HL DR L +I HP S TPF+ L R+I+ QQ++ KA + +T+FI
Sbjct: 15 EAAVAHLMRRDRILKKIIPQHPEVWLTSRGTPFVTLARAIIGQQISTKAADAAWTKFIDA 74
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
G P VL + + LR+ G+S RKA Y+ DLA + + MDD+++ +
Sbjct: 75 VGKRP--TPVAVLRVGVEGLRKAGLSQRKAEYVQDLAVHFGERRVHPEKWAAMDDEAVIS 132
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
L + GIG W+ MF+IF+L RPDVLP++D G+ K + L Y E + ++ W
Sbjct: 133 ELIAIRGIGRWTAEMFLIFNLQRPDVLPLDDPGLLKAISLHYFSGEPVSRFEAREVSLAW 192
Query: 309 RPYRSVASWYLWRFVE 324
+P+R+VA+WYLWR +E
Sbjct: 193 QPWRTVATWYLWRSLE 208
>gi|289665301|ref|ZP_06486882.1| DNA-3-methyladenine glycosylase [Xanthomonas campestris pv.
vasculorum NCPPB 702]
Length = 224
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 117/203 (57%), Gaps = 6/203 (2%)
Query: 127 EVEAAIRHLRNADRQLASLID----IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIY 182
+VEAA HL DR L + + I P P + P AL R+IL+QQL+ KA ++I
Sbjct: 9 DVEAAFAHLARRDRALGAWMKRIGPIAPQPGWRKPFDPVDALARAILFQQLSGKAASTIV 68
Query: 183 TRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNG-ILSDSAIVNM 241
R + + G + +T+ + LR GVSG KA L DLAR+ G I S + M
Sbjct: 69 AR-VEVAIGAQRLHADTLGRIDDAALRACGVSGNKALALRDLARRESAGEIPSLRRLAFM 127
Query: 242 DDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQM 301
DD ++ L V GIG W+V M ++F L RPD+LPI+DLGVRKG Q + E++P P ++
Sbjct: 128 DDNAIVDALVPVRGIGRWTVEMMLMFRLGRPDLLPIDDLGVRKGAQRVDKQEQMPTPKEL 187
Query: 302 DQLCEKWRPYRSVASWYLWRFVE 324
E+W PYR+ A++YLW+ +
Sbjct: 188 AVRGERWGPYRTYAAFYLWQIAD 210
>gi|409422742|ref|ZP_11259827.1| DNA-3-methyladenine glycosylase II [Pseudomonas sp. HYS]
Length = 209
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 81/195 (41%), Positives = 115/195 (58%), Gaps = 11/195 (5%)
Query: 134 HLRNADRQLASLID-----IH-PPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIA 187
+L DR+ A+ I+ +H P PT D P+ AL R+I YQQL KAG +I RF+A
Sbjct: 13 YLAALDRRWAAHIEAVGPCLHQPKPTRD----PYQALVRAIAYQQLHAKAGDAILGRFLA 68
Query: 188 LCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVN-MDDKSL 246
L PE VLA TP+QLR G S K + + +AR G++ D + + D++L
Sbjct: 69 LYPDTGFPSPEQVLATTPEQLRGCGFSANKLATIQGIARARVEGLVPDYQQASALADEAL 128
Query: 247 FTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCE 306
L + G+G W+V M +I++L R D+LP +D GVR+G + L LE+ P QM L +
Sbjct: 129 IERLVNLRGVGRWTVEMLLIYTLERMDILPADDFGVREGYRRLQGLEKQPTRRQMIDLGK 188
Query: 307 KWRPYRSVASWYLWR 321
+W PYR+VA+WYLWR
Sbjct: 189 RWSPYRTVAAWYLWR 203
>gi|397689741|ref|YP_006526995.1| DNA-3-methyladenine glycosylase [Melioribacter roseus P3M]
gi|395811233|gb|AFN73982.1| DNA-3-methyladenine glycosylase [Melioribacter roseus P3M]
Length = 210
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 115/197 (58%), Gaps = 4/197 (2%)
Query: 127 EVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFI 186
E+E A+ HL D+ L++LI + + F+AL R+I+ QQL+ KA SI +F+
Sbjct: 5 EIERALAHLSRNDKVLSTLIKNNGICNLPTHKKYFIALLRAIIGQQLSLKAADSINRKFL 64
Query: 187 ALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSL 246
A P+++L+ + LR +G+S K Y+ DLA K + G + D+ +
Sbjct: 65 AYFDNSPD--PDSILSAKDETLRSLGLSKAKVKYVKDLALKVKEGEVKLKNFSKKRDEEI 122
Query: 247 FTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCE 306
LT V G+G W+ MF+IF+L RPDVLP++DLG+RK + L Y L+ LP ++ +L +
Sbjct: 123 IEELTKVKGVGVWTAQMFLIFTLGRPDVLPVDDLGIRKAIMLNYGLKNLPSGEEIKRLAK 182
Query: 307 K--WRPYRSVASWYLWR 321
K W P+ ++AS YLW+
Sbjct: 183 KNGWSPFSTIASLYLWK 199
>gi|413958322|ref|ZP_11397561.1| HhH-GPD family protein [Burkholderia sp. SJ98]
gi|413940902|gb|EKS72862.1| HhH-GPD family protein [Burkholderia sp. SJ98]
Length = 339
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 149/294 (50%), Gaps = 37/294 (12%)
Query: 56 QTSSPPSKIPLRPRKIRKLSPDNGVDQASSSQPTESSKATSAKSTK-------SRA---I 105
+T+ P + L+ K + NG +AS + TE ++A+ AK +RA +
Sbjct: 46 KTAKPARSVALKAAKPETATRLNGAARASKAG-TEEAEASPAKGNGRAIAGDGARAQALV 104
Query: 106 QQQQQTLTVPRII----ARPLSSEGEVEAAIR---------HLRNADRQLASLIDIHPPP 152
++ + + R++ A P+ G A+R L DR L LI P
Sbjct: 105 AERGEVVRKSRVVTSDAAVPVQIGGLTREAVRPDYWDRACADLMRRDRILKKLI-----P 159
Query: 153 TFDSFH-----TPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQ 207
F H PF L RS+ QQ++ KA +I+ R C V P + L ++
Sbjct: 160 KFGEIHLVNLGDPFSTLARSVAGQQISVKAAQAIWERVKGAC---PEVHPAHFIKLGHEK 216
Query: 208 LRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIF 267
L+ G+S RKA Y+ DLA+ +++G L A +MDD+++ LT + GIG W+ MF+IF
Sbjct: 217 LQACGLSKRKAEYILDLAQHFESGALHVDAWTSMDDEAVIAELTQIRGIGRWTAEMFLIF 276
Query: 268 SLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
+L RPDVLP++DLG+ + + + Y E S+ ++ W P+R+VA+WY+WR
Sbjct: 277 NLSRPDVLPLDDLGLIQAISVNYFSGEPVTRSEAREVAANWEPWRTVATWYMWR 330
>gi|320109207|ref|YP_004184797.1| DNA-3-methyladenine glycosylase II [Terriglobus saanensis SP1PR4]
gi|319927728|gb|ADV84803.1| DNA-3-methyladenine glycosylase II [Terriglobus saanensis SP1PR4]
Length = 238
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 121/211 (57%), Gaps = 16/211 (7%)
Query: 127 EVEAAIRHLRNADRQLASLIDIHPPPTFDSF--HTPFLALTRSILYQQLAFKAGTSIYTR 184
+ EAA+ HL D +L LI T + +PF ALT +I++QQL KA +I+ R
Sbjct: 15 DTEAALAHLTARDAKLGRLIARAGAFTMRTAGQQSPFEALTEAIVFQQLHGKAAATIHRR 74
Query: 185 ----FIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSA-IV 239
F +CG PE +L +QLR G+S KA L DLA K +G + A I
Sbjct: 75 LLESFHPVCGIGLHPSPEHLLDCPNEQLRGAGLSHNKALALRDLAAKTLDGTVPTLAKIR 134
Query: 240 NMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLY-SLE----- 293
MDD+++ LT V GIG W+V M +IF L RPDVLP++D GVRKG L + L+
Sbjct: 135 RMDDEAIIEHLTQVRGIGRWTVEMMLIFRLGRPDVLPVDDYGVRKGFALTFLGLKSTGKV 194
Query: 294 ---ELPRPSQMDQLCEKWRPYRSVASWYLWR 321
+LP+ +++ EKWRP+RSVASWY++R
Sbjct: 195 VPRDLPKAVVIEKRAEKWRPFRSVASWYMYR 225
>gi|421484512|ref|ZP_15932080.1| DNA-3-methyladenine glycosylase [Achromobacter piechaudii HLE]
gi|400197007|gb|EJO29975.1| DNA-3-methyladenine glycosylase [Achromobacter piechaudii HLE]
Length = 214
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 113/196 (57%), Gaps = 2/196 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
EAA+ HL DR L +I HP S TPF+ L R+I+ QQ++ KA +++T+FI
Sbjct: 15 EAAVAHLMRRDRILKKVIPQHPEVWLTSRGTPFVTLARAIIGQQISTKAADAVWTKFIDA 74
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
G P VL + LR+ G+S RKA Y+ DLA + + MDD+++ +
Sbjct: 75 VGKRP--TPVAVLRVGVDGLRKAGLSQRKAEYVLDLAVHFGERRVHPEKWAAMDDEAVIS 132
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
L + GIG W+ MF+IF+L RPDVLP++D G+ K + L Y E + ++ W
Sbjct: 133 ELVAIRGIGRWTAEMFLIFNLQRPDVLPLDDPGLLKAISLHYFSGEPVSRFEAREVSLAW 192
Query: 309 RPYRSVASWYLWRFVE 324
+P+R+VA+WYLWR +E
Sbjct: 193 QPWRTVATWYLWRSLE 208
>gi|451822879|ref|YP_007459153.1| DNA-3-methyladenine glycosylase II [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
gi|451775679|gb|AGF46720.1| DNA-3-methyladenine glycosylase II [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
Length = 207
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 115/196 (58%), Gaps = 2/196 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
E AI L+ DR L +I ++ S ++PFL L R +L QQ++ K+ +I+ R I L
Sbjct: 14 EKAILELKKKDRILKKIIPLYKGKYKPSANSPFLTLIRFVLGQQVSVKSADTIWGRLIRL 73
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
G P+ +L + + LR IG+S RK YL D+A + + +MDD+S+ +
Sbjct: 74 LGDNPS--PKLILDIDSESLRVIGISKRKIEYLKDIADHFVAKHIQPEKWADMDDESIIS 131
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
L+ + G+G W+ MF+IF+L RPDV+P++DLG+ K + + Y E + ++ W
Sbjct: 132 DLSSIRGVGRWTAEMFLIFNLQRPDVMPLDDLGLLKAISIHYFSGEPVSRFEAREVSVAW 191
Query: 309 RPYRSVASWYLWRFVE 324
RP+R+VA+WYLWR +E
Sbjct: 192 RPWRTVATWYLWRSIE 207
>gi|451979826|ref|ZP_21928235.1| DNA-3-methyladenine glycosylase II [Nitrospina gracilis 3/211]
gi|451762918|emb|CCQ89441.1| DNA-3-methyladenine glycosylase II [Nitrospina gracilis 3/211]
Length = 219
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 117/197 (59%), Gaps = 1/197 (0%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
A +RH D +A++I P F L ++I+ QQ++ + IY RF AL
Sbjct: 19 RAILRHFDRQDPVMAAVIRQIGPMRLRRNRNYFQVLCKAIVGQQISTRVADVIYARFQAL 78
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
G+ P+ V A+ +LR +G+S +KA+YLHDL+ ++ + + + ++++++
Sbjct: 79 FDGKQPT-PDRVAAVPADRLRTVGLSRQKAAYLHDLSARFIDKTIRPHQLNYLENEAIIE 137
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT V+GIG W+ MF+IFSL+R DVLP++DLG+R V+ +Y L E+P+ Q+ L E W
Sbjct: 138 RLTAVHGIGRWTAEMFLIFSLNRMDVLPVDDLGLRAAVKTIYGLPEMPKAKQLRSLAEPW 197
Query: 309 RPYRSVASWYLWRFVEA 325
P +VA+WY WR ++
Sbjct: 198 HPLETVATWYAWRTLDG 214
>gi|225873487|ref|YP_002754946.1| DNA-3-methyladenine glycosylase [Acidobacterium capsulatum ATCC
51196]
gi|225794495|gb|ACO34585.1| putative DNA-3-methyladenine glycosylase [Acidobacterium capsulatum
ATCC 51196]
Length = 229
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/226 (39%), Positives = 119/226 (52%), Gaps = 19/226 (8%)
Query: 120 RPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTF--DSFHTPFLALTRSILYQQLAFKA 177
RP+ + ++ A R L AD +L LI+ P T S H+PF +L SI+YQQL KA
Sbjct: 6 RPVRYDADL--ACRELAEADPKLGKLIECAGPFTLRLQSQHSPFESLLESIIYQQLHGKA 63
Query: 178 GTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGIL-SDS 236
+I R + GE PE +LA QLR GVS K L DLA K +G + S
Sbjct: 64 AAAILKRLLE-SFGEYHPAPEHLLAAPDDQLRAAGVSQSKVLALRDLAAKTMDGTVPSLQ 122
Query: 237 AIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELP 296
I M D + L+ V GIG W+ M +IF L RPDV P+ D G+RKG L + + LP
Sbjct: 123 RIRRMPDDEIVARLSAVRGIGKWTAEMMLIFRLGRPDVFPVTDYGIRKGFAL--TFDRLP 180
Query: 297 RP-----------SQMDQLCEKWRPYRSVASWYLWRFVEAKGAPSS 331
+ +M + EKWRP+RSVA+WYLWR + G S+
Sbjct: 181 KSKPFDASMLADMKKMARRAEKWRPWRSVATWYLWRACDLAGKSST 226
>gi|423094884|ref|ZP_17082680.1| DNA-3-methyladenine glycosylase [Pseudomonas fluorescens Q2-87]
gi|397888998|gb|EJL05481.1| DNA-3-methyladenine glycosylase [Pseudomonas fluorescens Q2-87]
Length = 204
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 102/163 (62%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R+I YQQL +AG +I R +AL PE +LA Q+R G S K +
Sbjct: 39 PYEALVRAIAYQQLHARAGDAILGRLLALYPALTFPRPEQLLATDIAQMRGCGFSASKIT 98
Query: 220 YLHDLARKYQNGILSDSAI-VNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
LH +A+ +G++ D A + MDD++L LTM+ G+G W+V M +I+SL RPD+LP +
Sbjct: 99 TLHGIAQAALDGLVPDYATALVMDDEALIERLTMLRGVGRWTVEMLLIYSLERPDILPAD 158
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR+G + L LE+ P QM ++ W PYR+VA+WYLWR
Sbjct: 159 DFGVREGYRRLKGLEQQPSRKQMIEIGLAWSPYRTVAAWYLWR 201
>gi|448578484|ref|ZP_21643919.1| DNA-3-methyladenine glycosylase [Haloferax larsenii JCM 13917]
gi|445727025|gb|ELZ78641.1| DNA-3-methyladenine glycosylase [Haloferax larsenii JCM 13917]
Length = 194
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/196 (39%), Positives = 112/196 (57%), Gaps = 9/196 (4%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A R LR AD L +++ H P + D PF L SI+ QQL+ A +I R
Sbjct: 5 AYRELR-ADTHLGDVVETHGPLSLDPAADPFERLVVSIVNQQLSTTAAATIRDRLF---- 59
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
V P +LA LR G+SG+K Y+ ++A +QNG+ +DS + MDD + L
Sbjct: 60 DRVEVTPAGLLAAEESVLRDCGLSGQKVGYVRNVAEAFQNGLSADS-LRTMDDDEVIDAL 118
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLE--ELPRPSQMDQLCEKW 308
T + G+G W+ MF+IF L R DV P+ DLG+R+G++ ++ +E LPR ++M + E W
Sbjct: 119 TEIRGVGVWTAKMFLIFVLAREDVFPVEDLGIRRGMEHVFDVEADALPR-AEMVERAESW 177
Query: 309 RPYRSVASWYLWRFVE 324
PYRS AS YLWR V+
Sbjct: 178 APYRSYASLYLWRVVD 193
>gi|162146346|ref|YP_001600805.1| DNA-3-methyladenine glycosylase [Gluconacetobacter diazotrophicus
PAl 5]
gi|209543651|ref|YP_002275880.1| DNA-3-methyladenine glycosylase II [Gluconacetobacter
diazotrophicus PAl 5]
gi|161784921|emb|CAP54464.1| putative DNA-3-methyladenine glycosylase [Gluconacetobacter
diazotrophicus PAl 5]
gi|209531328|gb|ACI51265.1| DNA-3-methyladenine glycosylase II [Gluconacetobacter
diazotrophicus PAl 5]
Length = 230
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 119/212 (56%), Gaps = 9/212 (4%)
Query: 127 EVEAAIR-HLRNADRQLASLIDIHPPPTF--DSFHTPFLALTRSILYQQLAFKAGTSIYT 183
E++ AIR HL AD LA+L+ P + P+ AL +I +QQL +A +I
Sbjct: 17 ELDRAIRAHLSAADPDLAALVARIGPCGLRMHAAREPYEALVDAIAHQQLHGRAAQAILG 76
Query: 184 RFIALCGGEAGVVPE--TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGIL-SDSAIVN 240
R +AL GG V P+ +LAL + LR G SG K +H +A+ +G++ S +
Sbjct: 77 RMVALAGG---VFPDPAALLALPVEALRGCGFSGSKIVAMHGVAKARLDGLVPSRRQAES 133
Query: 241 MDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQ 300
+ D L L + GIG W+V M +IFSL R D++P++D GVR+G +LL L+ PRP Q
Sbjct: 134 LSDAELIARLVSLRGIGRWTVEMLLIFSLGRLDIMPVDDFGVREGWRLLKGLDAQPRPKQ 193
Query: 301 MDQLCEKWRPYRSVASWYLWRFVEAKGAPSSA 332
+ + W PYRS A+WYLWR +A P A
Sbjct: 194 LAAIAADWSPYRSAAAWYLWRAADAVKPPDRA 225
>gi|171463665|ref|YP_001797778.1| HhH-GPD family protein [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171193203|gb|ACB44164.1| HhH-GPD family protein [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 223
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 116/196 (59%), Gaps = 2/196 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
E A + L DR L LI + + PF L R+I+ QQ++ A S++ + ++
Sbjct: 24 EQACKELMKQDRILKKLIPKYGSGFLVTRGDPFNTLARAIVGQQISVAAAQSVWNKVVSA 83
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C + V P+ +LAL+ ++LR G+SGRK Y+ DLA + +G L + +MDD+S+
Sbjct: 84 C--KKKVTPKNILALSSEELRAAGLSGRKVEYIRDLADHFDSGRLHANQWKDMDDESVIK 141
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
L+ + GIG W+ MF+IF++ RP++LP++D+G+ K + L Y E + ++ W
Sbjct: 142 ELSSIRGIGRWTAEMFLIFNMVRPNILPLDDVGLIKAISLNYFSGEPVSRHEAREVAANW 201
Query: 309 RPYRSVASWYLWRFVE 324
P+R+VA+WY+WR ++
Sbjct: 202 APWRTVATWYMWRSID 217
>gi|429334987|ref|ZP_19215634.1| DNA-3-methyladenine glycosylase II [Pseudomonas putida CSV86]
gi|428760394|gb|EKX82661.1| DNA-3-methyladenine glycosylase II [Pseudomonas putida CSV86]
Length = 219
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 111/179 (62%), Gaps = 6/179 (3%)
Query: 150 PPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLR 209
P PT D P+ AL R+I YQQL KA +I RF+AL G+A PE +LA TP+ LR
Sbjct: 45 PLPTRD----PYQALVRAIAYQQLHAKAAEAILGRFLALFPGQAFPSPEQLLATTPEHLR 100
Query: 210 QIGVSGRKASYLHDLARKYQNGILSDSAIVNM-DDKSLFTMLTMVNGIGSWSVHMFMIFS 268
G SGRK S + +A+ +G++ D + + + L LT + G+G W+V M +I++
Sbjct: 101 ACGFSGRKISTVQAVAQGRLDGLVPDHDEARLLEHEVLVERLTRLPGVGRWTVEMLLIYT 160
Query: 269 LHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAKG 327
L + D+LP++D GVR+G + L+ LE P Q+ +L W PYR+VA+WYLWR V A+G
Sbjct: 161 LEQMDILPVDDFGVREGYRRLHGLEAQPTRKQLLELGAAWSPYRTVAAWYLWR-VPARG 218
>gi|346724121|ref|YP_004850790.1| DNA-3-methyladenine glycosylase [Xanthomonas axonopodis pv.
citrumelo F1]
gi|346648868|gb|AEO41492.1| DNA-3-methyladenine glycosylase [Xanthomonas axonopodis pv.
citrumelo F1]
Length = 224
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 121/210 (57%), Gaps = 7/210 (3%)
Query: 121 PLSSEG-EVEAAIRHLRNADRQLASLID----IHPPPTFDSFHTPFLALTRSILYQQLAF 175
P + G +VEAA H+ DR L + + I P P + P AL R+IL+QQL+
Sbjct: 2 PCHARGFDVEAAFAHVSRRDRALGAWMKRIGPIAPQPGWHKPFDPVDALARAILFQQLSG 61
Query: 176 KAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNG-ILS 234
KA ++I R + + G + +T+ + LR GVSG KA L DLAR+ + G I S
Sbjct: 62 KAASTIVAR-VEVAIGAQRLHADTLDRIDDAALRACGVSGNKALALRDLARREREGEIPS 120
Query: 235 DSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEE 294
+ MD+ ++ L V GIG W+V M ++F L RPD+LPI+DLGVRKG Q + E+
Sbjct: 121 LRRLAFMDEDAIVQALVPVRGIGRWTVEMMLMFRLGRPDLLPIDDLGVRKGAQRVDKQEQ 180
Query: 295 LPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
+P P ++ E+W PYR+ A++YLW+ +
Sbjct: 181 MPTPRELAARGERWGPYRTYAAFYLWKIAD 210
>gi|196229700|ref|ZP_03128564.1| DNA-3-methyladenine glycosylase II [Chthoniobacter flavus Ellin428]
gi|196226026|gb|EDY20532.1| DNA-3-methyladenine glycosylase II [Chthoniobacter flavus Ellin428]
Length = 214
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 108/191 (56%), Gaps = 3/191 (1%)
Query: 134 HLRNADRQLASLIDIHPPPTF--DSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGG 191
+L + + LI H P T + H+PF AL R++ +QQL A +I RF AL G
Sbjct: 8 YLTKRCKVMRRLIRTHGPCTLQPEKDHSPFRALVRAVAHQQLNGTAAETILRRFCALFPG 67
Query: 192 EAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGIL-SDSAIVNMDDKSLFTML 250
+ + + ++T + LR G S K + L D+A K +G + S AI M+D + L
Sbjct: 68 KKFPTAKDLASVTDEALRGSGFSWAKIAALRDIAAKTLDGTIPSTRAIQKMNDAEIIERL 127
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRP 310
V G+G W+V M +IF L RPDV P +D G+R G ++ Y L+E+P+P ++ E+WRP
Sbjct: 128 VQVRGVGRWTVEMMLIFKLGRPDVFPADDFGIRDGFRVAYGLDEMPKPKEILAHAERWRP 187
Query: 311 YRSVASWYLWR 321
Y + A+WY WR
Sbjct: 188 YATTAAWYFWR 198
>gi|339325370|ref|YP_004685063.1| DNA-3-methyladenine glycosylase 1 [Cupriavidus necator N-1]
gi|338165527|gb|AEI76582.1| DNA-3-methyladenine glycosylase 1 [Cupriavidus necator N-1]
Length = 279
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 140/278 (50%), Gaps = 20/278 (7%)
Query: 55 PQTSSPPSKIPLRPRKIRKLSPDNGVDQASSSQPTESSKATSAKSTKSRAIQQQQQTLTV 114
P T++PP+ P + + P G AS + P K + + ++A+ +
Sbjct: 8 PATATPPATSPATRGRAKAAGPRPGKAGASEA-PLPDGKDAARGTRNAKAV--------L 58
Query: 115 PRIIARPLSSEGEVEA--------AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTR 166
P A PL E ++A A L DR L +I + P S PF+ L R
Sbjct: 59 PEADAVPLPVETVIDAVRPAYWDEACADLMKRDRILRKMIPTYGPAHLVSRGDPFVTLAR 118
Query: 167 SILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLAR 226
+++ QQ++ KA S++ R LC + P L P++L G+S RK YL DLA
Sbjct: 119 AVVGQQISVKAAQSVWERLHTLC---PKLTPAQFLRAGPEKLAGCGLSKRKGEYLIDLAD 175
Query: 227 KYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV 286
++ G++ + MDD+++ LT + GIG W+ MF++F+L RP+VLP++D+G+ +
Sbjct: 176 HFKAGMVHVAEWAQMDDEAVIAELTQIRGIGRWTAEMFLMFNLMRPNVLPLDDIGLINAI 235
Query: 287 QLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
Y E S+ ++ W P+R+VA+WY+WR ++
Sbjct: 236 SANYFSGEPVTRSEAREVAANWEPWRTVATWYMWRSLD 273
>gi|381170674|ref|ZP_09879829.1| HhH-GPD superbase excision DNA repair family protein [Xanthomonas
citri pv. mangiferaeindicae LMG 941]
gi|390991802|ref|ZP_10262057.1| hhH-GPD superbase excision DNA repair family protein [Xanthomonas
axonopodis pv. punicae str. LMG 859]
gi|418518318|ref|ZP_13084466.1| DNA-3-methyladenine glycosylase [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
gi|418520739|ref|ZP_13086787.1| DNA-3-methyladenine glycosylase [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|372553477|emb|CCF69032.1| hhH-GPD superbase excision DNA repair family protein [Xanthomonas
axonopodis pv. punicae str. LMG 859]
gi|380688928|emb|CCG36316.1| HhH-GPD superbase excision DNA repair family protein [Xanthomonas
citri pv. mangiferaeindicae LMG 941]
gi|410703624|gb|EKQ62115.1| DNA-3-methyladenine glycosylase [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|410704011|gb|EKQ62497.1| DNA-3-methyladenine glycosylase [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
Length = 224
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 118/203 (58%), Gaps = 6/203 (2%)
Query: 127 EVEAAIRHLRNADRQLASLID----IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIY 182
+VEAA H+ DR L + + I P P + P AL R+IL+QQL+ KA ++I
Sbjct: 9 DVEAAFAHVSRRDRALGAWMKRIGPIAPQPGWHKPFDPVDALARAILFQQLSGKAASTIV 68
Query: 183 TRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNG-ILSDSAIVNM 241
R + + G + +T+ + LR GVSG KA L DLAR+ G I S + M
Sbjct: 69 AR-VEVAIGAQRLHADTLGRIDDAALRACGVSGNKALALRDLARRESEGEIPSLRRLAFM 127
Query: 242 DDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQM 301
D++++ L V GIG W+V M ++F L RPD+LPI+DLGVRKG Q + E++P P ++
Sbjct: 128 DEEAIVQALVPVRGIGRWTVEMMLMFRLGRPDLLPIDDLGVRKGAQRVDKQEQMPTPKEL 187
Query: 302 DQLCEKWRPYRSVASWYLWRFVE 324
E+W PYR+ A++YLW+ +
Sbjct: 188 AVRGERWGPYRTYAAFYLWKIAD 210
>gi|293606584|ref|ZP_06688940.1| DNA-3-methyladenine glycosylase [Achromobacter piechaudii ATCC
43553]
gi|292814969|gb|EFF74094.1| DNA-3-methyladenine glycosylase [Achromobacter piechaudii ATCC
43553]
Length = 226
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 112/196 (57%), Gaps = 2/196 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
EAA+ HL DR L +I HP S TPF+ L R+I+ QQ++ KA + +T+FI
Sbjct: 27 EAAVAHLMRRDRILKKVIPQHPEVWLTSRGTPFVTLARAIIGQQVSAKAADAAWTKFIEA 86
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
G P VL + LR+ G+S RKA Y+ DLA + + MDD+++ +
Sbjct: 87 VGKRP--TPVAVLRVGVDGLRKAGLSQRKAEYVLDLAVHFGERRVHPEKWAAMDDEAVIS 144
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
L + GIG W+ MF+IF+L RPDVLP++D G+ K + L Y E + ++ W
Sbjct: 145 ELVAIRGIGRWTAEMFLIFNLQRPDVLPLDDPGLLKAISLHYFSGEPVSRFEAREVSLAW 204
Query: 309 RPYRSVASWYLWRFVE 324
+P+R+VA+WYLWR +E
Sbjct: 205 QPWRTVATWYLWRSLE 220
>gi|424796150|ref|ZP_18221919.1| DNA-3-methyladenine glycosylase, probable [Xanthomonas translucens
pv. graminis ART-Xtg29]
gi|422795099|gb|EKU23850.1| DNA-3-methyladenine glycosylase, probable [Xanthomonas translucens
pv. graminis ART-Xtg29]
Length = 224
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/207 (39%), Positives = 118/207 (57%), Gaps = 6/207 (2%)
Query: 127 EVEAAIRHLRNADRQLASLID----IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIY 182
+ +AA HL DR+ + + I P P + P AL R+IL+QQL+ KA +I
Sbjct: 9 DTQAAYDHLSRRDRKFGAWMRRIGPIAPQPGWARPFDPVDALARAILFQQLSGKAAATIV 68
Query: 183 TRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNG-ILSDSAIVNM 241
R + + G A + +T+ + LR GVS KA L DLAR+ G I S + M
Sbjct: 69 GR-VEVAIGSARLHADTLARIDDPGLRACGVSANKALALRDLARREAAGEIPSLRKLAFM 127
Query: 242 DDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQM 301
DD+++ L V GIG W+V M ++F L RPD+LP++DLGVRKG Q + L+++P P +
Sbjct: 128 DDEAIVQALLPVRGIGRWTVEMMLLFRLGRPDLLPVDDLGVRKGAQRVDQLQQMPAPQSL 187
Query: 302 DQLCEKWRPYRSVASWYLWRFVEAKGA 328
+ E+W PYRS AS+YLW+ + A
Sbjct: 188 AERGERWGPYRSYASFYLWKIADVSDA 214
>gi|71906482|ref|YP_284069.1| HhH-GPD [Dechloromonas aromatica RCB]
gi|71846103|gb|AAZ45599.1| DNA-3-methyladenine glycosylase II [Dechloromonas aromatica RCB]
Length = 205
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 114/192 (59%), Gaps = 5/192 (2%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
AI L D +A L++ + + S F+ L RSI+ QQ++ KA S++ RF G
Sbjct: 9 AISDLSRRDAAMAELVERYAGLSLVSRGDAFMTLARSIIGQQISVKAADSVWRRFSEQVG 68
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
V P +LA+ + L G+S RK YL DLA + +G L +A +DD+++ T L
Sbjct: 69 S---VTPTQILAVGERGLAGCGLSKRKTEYLCDLASHFSSGQLDPTAWSGLDDEAIITEL 125
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV-QLLYSLEELPRPSQMDQLCEKWR 309
V GIG W+ MF+IF+L RPDV P++D+G+++ V + + E+ PR + + E+WR
Sbjct: 126 VAVRGIGRWTAEMFLIFNLMRPDVFPLDDIGLQRAVNEHYFKGEKQPR-KILAEFGERWR 184
Query: 310 PYRSVASWYLWR 321
P+RSVA+WYLWR
Sbjct: 185 PWRSVATWYLWR 196
>gi|422320435|ref|ZP_16401496.1| DNA-3-methyladenine glycosylase [Achromobacter xylosoxidans C54]
gi|317404802|gb|EFV85181.1| DNA-3-methyladenine glycosylase [Achromobacter xylosoxidans C54]
Length = 214
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 113/196 (57%), Gaps = 2/196 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
EAA+ HL DR L +I HP S TPF+ L R+I+ QQ++ KA +++ +F+
Sbjct: 15 EAAVAHLMRRDRILKKIIPQHPEVWLTSRGTPFVTLARAIIGQQVSAKAADAVWDKFLEA 74
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
G P VL + + LR G+S RKA Y+ DLA + + MDD+++ +
Sbjct: 75 AGKRP--TPVAVLRVGLEGLRAAGLSQRKAEYVLDLAVHFGERRVHPEKWAAMDDEAVIS 132
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GIG W+ MF+IF+L RPDVLP++D G+ K + L Y E + ++ W
Sbjct: 133 ELTAIRGIGRWTAEMFLIFNLQRPDVLPLDDPGLLKAISLHYFSGEPVSRFEAREVSLAW 192
Query: 309 RPYRSVASWYLWRFVE 324
+P+R+VA+WYLWR +E
Sbjct: 193 QPWRTVATWYLWRSLE 208
>gi|255073031|ref|XP_002500190.1| predicted protein [Micromonas sp. RCC299]
gi|226515452|gb|ACO61448.1| predicted protein [Micromonas sp. RCC299]
Length = 291
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 105/172 (61%), Gaps = 17/172 (9%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQ--------LRQIG 212
F +L R+I++QQL A +I+ R + G + + VLALTP +R G
Sbjct: 84 FRSLARAIVFQQLNGTAAATIFGRVLRCVGAQ-----DDVLALTPDAIIDADEAAMRACG 138
Query: 213 VSGRKASYLHDLARKYQ----NGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFS 268
+S RK YL LAR + + LSD ++ MDD ++ + L + GIG WSVHMF +F
Sbjct: 139 LSQRKHEYLVALARAFHPAHSDFPLSDESLEAMDDTAVMSALVALRGIGPWSVHMFQMFY 198
Query: 269 LHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLW 320
L+RPDVLP D GVRKGV LY L ++P ++++++ E+W+P+R++AS Y+W
Sbjct: 199 LNRPDVLPTKDFGVRKGVMRLYGLRDMPSEAKVEEIAERWKPHRTLASMYMW 250
>gi|167031754|ref|YP_001666985.1| DNA-3-methyladenine glycosylase II [Pseudomonas putida GB-1]
gi|166858242|gb|ABY96649.1| DNA-3-methyladenine glycosylase II [Pseudomonas putida GB-1]
Length = 208
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 102/167 (61%), Gaps = 1/167 (0%)
Query: 156 SFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSG 215
S P+ AL R+I YQQL +A +I R +AL A PE +LA+TPQ LR G S
Sbjct: 41 SGREPYEALVRAIAYQQLHARAAEAILGRLLALFPANAFPQPEQLLAVTPQTLRACGFSA 100
Query: 216 RKASYLHDLARKYQNGIL-SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDV 274
K + + +A+ G++ + + M D++L L + G+G W+V M +I+SL R D+
Sbjct: 101 SKLATIQGIAQASLEGLVPTREQALAMADEALIERLVALRGVGRWTVEMLLIYSLERSDI 160
Query: 275 LPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
LP++D GVR+G + L LE+ P P+QM L WRP+R+VA+WYLWR
Sbjct: 161 LPVDDFGVREGYRRLKGLEKAPTPAQMRSLGGAWRPFRTVAAWYLWR 207
>gi|294627055|ref|ZP_06705645.1| DNA-3-methyladenine glycosylase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292598717|gb|EFF42864.1| DNA-3-methyladenine glycosylase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 224
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 118/203 (58%), Gaps = 6/203 (2%)
Query: 127 EVEAAIRHLRNADRQLASLID----IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIY 182
+VEAA H+ DR L + + I P P + P AL R+IL+QQL+ KA ++I
Sbjct: 9 DVEAAFAHVSRRDRALGAWMKRIGPIAPQPGWHKPFDPVDALARAILFQQLSGKAASTIV 68
Query: 183 TRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNG-ILSDSAIVNM 241
R + + G + +T+ + LR GVSG KA L DLAR+ G I S + M
Sbjct: 69 AR-VEVAIGAQRLHADTLGRIDDAALRACGVSGNKALALRDLARRESEGEIPSLRRLAFM 127
Query: 242 DDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQM 301
D++++ L V GIG W+V M ++F L RPD+LPI+DLGVRKG Q + E++P P ++
Sbjct: 128 DEEAIVQALVPVRGIGRWTVEMMLMFRLGRPDLLPIDDLGVRKGAQRVDRQEQMPTPREL 187
Query: 302 DQLCEKWRPYRSVASWYLWRFVE 324
E+W PYR+ A++YLW+ +
Sbjct: 188 AVRGERWGPYRTYAAFYLWKIAD 210
>gi|423013096|ref|ZP_17003817.1| DNA-3-methyladenine glycosylase [Achromobacter xylosoxidans AXX-A]
gi|338783932|gb|EGP48283.1| DNA-3-methyladenine glycosylase [Achromobacter xylosoxidans AXX-A]
Length = 214
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 113/196 (57%), Gaps = 2/196 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
EAA+ HL DR L +I HP S TPF+ L R+I+ QQ++ KA +++ +F+
Sbjct: 15 EAAVAHLMRRDRILKKIIPQHPEVWLTSRGTPFVTLARAIIGQQVSAKAADAVWDKFLEA 74
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
G P VL + + LR G+S RKA Y+ DLA + + MDD+++ +
Sbjct: 75 AGKRP--TPVAVLRVGLEGLRAAGLSQRKAEYVLDLAVHFGERRVHPEKWAAMDDEAVIS 132
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GIG W+ MF+IF+L RPDVLP++D G+ K + L Y E + ++ W
Sbjct: 133 ELTAIRGIGRWTAEMFLIFNLQRPDVLPLDDPGLLKAISLHYFSGEPVSRFEAREVSLAW 192
Query: 309 RPYRSVASWYLWRFVE 324
+P+R+VA+WYLWR +E
Sbjct: 193 QPWRTVATWYLWRSLE 208
>gi|448709093|ref|ZP_21701151.1| HhH-GPD family protein [Halobiforma nitratireducens JCM 10879]
gi|445792461|gb|EMA43063.1| HhH-GPD family protein [Halobiforma nitratireducens JCM 10879]
Length = 196
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 111/183 (60%), Gaps = 11/183 (6%)
Query: 142 LASLIDIHPP---PTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPE 198
+A LID H P P +D F L SI+ QQL+ + ++ R + GE V PE
Sbjct: 15 MADLIDRHDPYVEPDWDEFER----LCISIINQQLSTASAMAVRERTFDVLDGE--VTPE 68
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
TVLA + LR G+SGRK Y+ + AR +Q + + + + + + LT + GIG
Sbjct: 69 TVLAADDEALRDAGLSGRKIEYMRNAARAFQEHDYTRAGLADYANDDVIDQLTEIKGIGE 128
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSL-EELPRPSQMDQLCEKWRPYRSVASW 317
W+ M+++F L RPD+LP+ DL VR+G++ LY+ EELPR ++M ++ ++WRPYRSVA+
Sbjct: 129 WTARMYLLFVLERPDILPLGDLAVRRGIEQLYADGEELPR-AEMREIAQQWRPYRSVATR 187
Query: 318 YLW 320
Y+W
Sbjct: 188 YIW 190
>gi|226225775|ref|YP_002759881.1| DNA-3-methyladenine glycosylase [Gemmatimonas aurantiaca T-27]
gi|226088966|dbj|BAH37411.1| DNA-3-methyladenine glycosylase [Gemmatimonas aurantiaca T-27]
Length = 243
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 119/216 (55%), Gaps = 8/216 (3%)
Query: 120 RPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTF--DSFHTPFLALTRSILYQQLAFKA 177
+PL++ + AI L D +L + I P T + T F L R+I+YQQL+ A
Sbjct: 26 KPLTTR-RLTQAIAELSERDTRLGAAIAAVGPCTLLPRTEGTHFGHLARNIVYQQLSGSA 84
Query: 178 GTSIYTRFIALCGGEAGV-----VPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGI 232
T+I+ RF+ GV PE+VL + LR G+S K + DLA+ +G
Sbjct: 85 ATTIHGRFLKHVSAHLGVETEHPTPESVLGIDDDALRGCGLSVAKVRAIKDLAQHVIDGR 144
Query: 233 LSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSL 292
L + M D+ + L V GIG W+ MF++F L RPDVLP+ DLGVRKG Q +Y
Sbjct: 145 LPLDRLDVMSDQEIIDALVPVRGIGPWTAQMFLMFRLGRPDVLPVLDLGVRKGAQRIYRT 204
Query: 293 EELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAKGA 328
LP ++++++ + WRP+ SVASWY WR ++ + A
Sbjct: 205 RALPDAARLEKIAKTWRPWASVASWYCWRVLDLEDA 240
>gi|104780072|ref|YP_606570.1| DNA-3-methyladenine glycosylase [Pseudomonas entomophila L48]
gi|95109059|emb|CAK13755.1| putative DNA-3-methyladenine glycosylase [Pseudomonas entomophila
L48]
Length = 208
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 103/163 (63%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ L R+I YQQL +A +I R +AL A PE +LA++P+ +R G S K +
Sbjct: 45 PYETLVRAIAYQQLHARAAEAILGRLLALFPETAFPTPEQLLAVSPEMMRACGFSASKTA 104
Query: 220 YLHDLARKYQNGIL-SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
LH +A+ Y G++ S + + + D +L L + G+G W+V M +I+SL R D+LP++
Sbjct: 105 TLHGIAQAYLEGVVPSRAEALLLPDDALVERLVSLRGVGRWTVEMLLIYSLERSDILPVD 164
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR+G + + LE+ P P++M ++ + W PYR+VA+WYLWR
Sbjct: 165 DFGVREGYRRMKGLEKAPTPARMREMGQAWSPYRTVAAWYLWR 207
>gi|302846811|ref|XP_002954941.1| hypothetical protein VOLCADRAFT_118912 [Volvox carteri f.
nagariensis]
gi|300259704|gb|EFJ43929.1| hypothetical protein VOLCADRAFT_118912 [Volvox carteri f.
nagariensis]
Length = 365
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/219 (37%), Positives = 121/219 (55%), Gaps = 18/219 (8%)
Query: 103 RAIQQQQQTLTVPRIIARPLSSEGEVEAAIRHLRNADRQLASLI------DIHPPPTFDS 156
RA+ T+TV R + ++E A+ HLR D + + D +
Sbjct: 155 RAVITAATTVTVLRSVT-------DLELAVAHLRARDPRSSRGGSSGGPWDCGDGRGGGA 207
Query: 157 FHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAG--VVPETVLALTPQQLRQIGVS 214
H+ F AL RS++YQQLA KA ++I+ R +A+C +G + P VL+ +QLR G+S
Sbjct: 208 SHSLFAALARSVVYQQLATKAASAIWGRVLAVCKATSGDLLTPGQVLSTPAEQLRAAGLS 267
Query: 215 GRKASYLHDLARKY--QNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRP 272
GRK YL +A + + G + D L + LT + G+GSW+VHM +F L P
Sbjct: 268 GRKLEYLTGMAEAFATREG-WEERLAATHDLDQLVSELTSLRGVGSWTVHMLAMFHLGLP 326
Query: 273 DVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPY 311
DVLP DLGVR+G+Q L+ L +LP+P Q++ L E WRPY
Sbjct: 327 DVLPCGDLGVRRGLQQLHKLPKLPQPKQVEDLTEAWRPY 365
>gi|398940926|ref|ZP_10669534.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Pseudomonas sp. GM41(2012)]
gi|398162170|gb|EJM50375.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Pseudomonas sp. GM41(2012)]
Length = 223
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 101/163 (61%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ +L R+I YQQL KAG +I R +AL G A PE ++A QLR G S K +
Sbjct: 39 PYESLVRAIAYQQLHAKAGDAIVGRLLALFGTGAFPRPEQIVATGFDQLRSCGFSASKIA 98
Query: 220 YLHDLARKYQNGILSDSA-IVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ +G++ D A + MDD++L L + G+G W+V M +I+SL RPD+LP +
Sbjct: 99 TIQGIAQAALDGVVPDYAEAMAMDDEALIERLITLRGVGRWTVEMLLIYSLERPDILPAD 158
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR+G + + LE P QM ++ WRPYR+VA+WYLWR
Sbjct: 159 DFGVREGYRRMKGLEVQPTRKQMIEIGLGWRPYRTVAAWYLWR 201
>gi|307153785|ref|YP_003889169.1| HhH-GPD family protein [Cyanothece sp. PCC 7822]
gi|306984013|gb|ADN15894.1| HhH-GPD family protein [Cyanothece sp. PCC 7822]
Length = 215
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 113/194 (58%), Gaps = 3/194 (1%)
Query: 131 AIRHLRNAD---RQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIA 187
A+ +L+ AD Q+ S I + F S + AL +I+ QQ++ + IY RF++
Sbjct: 11 ALYYLQEADIIMAQIISEIGDYQLAEFKSNSSLLEALAWAIMAQQISTEVANKIYQRFLS 70
Query: 188 LCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLF 247
L + +L + + LR IG+S K YL +LAR + + S + M+D+++
Sbjct: 71 LYNESTPLNARNLLQTSDEDLRSIGISRYKIGYLKNLARAVEEYLPPLSELATMEDETII 130
Query: 248 TMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEK 307
+LT + GIG+W+V M +IF L R D+LP DLG+R ++ LY L ELP P ++ + K
Sbjct: 131 KLLTQIKGIGTWTVQMLLIFRLQRLDILPSGDLGIRMAIKNLYQLPELPSPEIVEAIGHK 190
Query: 308 WRPYRSVASWYLWR 321
W+PYR++A+WYLWR
Sbjct: 191 WKPYRTIAAWYLWR 204
>gi|335428146|ref|ZP_08555065.1| methylated-DNA--protein-cysteine methyltransferase [Haloplasma
contractile SSD-17B]
gi|335431026|ref|ZP_08557911.1| methylated-DNA--protein-cysteine methyltransferase [Haloplasma
contractile SSD-17B]
gi|334887192|gb|EGM25529.1| methylated-DNA--protein-cysteine methyltransferase [Haloplasma
contractile SSD-17B]
gi|334893369|gb|EGM31585.1| methylated-DNA--protein-cysteine methyltransferase [Haloplasma
contractile SSD-17B]
Length = 367
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 117/201 (58%), Gaps = 8/201 (3%)
Query: 120 RPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGT 179
R + ++ E+E L+ D ++ LI+ D PF+AL SI+YQQLA KA T
Sbjct: 4 RIIITDREIEG----LKAKDEKMKLLIETIGDINRDYIKNPFIALVHSIVYQQLAIKAAT 59
Query: 180 SIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIV 239
+I+ RF + PE++L + + LR G+S K +Y+ ++AR L+ +
Sbjct: 60 AIWNRFCE----TVTLTPESLLYTSDELLRTCGLSRTKITYIKNIARAVVQRDLTLEKLT 115
Query: 240 NMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPS 299
+M D + LT + GIG+W+ MF+IFSL+R DV+ DL + KG++ LY+++ LP +
Sbjct: 116 HMSDADIIEQLTYIKGIGTWTAEMFLIFSLNRKDVMSYKDLAILKGLKWLYNMKNLPTMT 175
Query: 300 QMDQLCEKWRPYRSVASWYLW 320
Q ++L +K+ PY ++AS YLW
Sbjct: 176 QFEKLKKKFTPYNTLASLYLW 196
>gi|384418292|ref|YP_005627652.1| DNA-3-methyladenine glycosylase [Xanthomonas oryzae pv. oryzicola
BLS256]
gi|353461206|gb|AEQ95485.1| DNA-3-methyladenine glycosylase [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 224
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 115/203 (56%), Gaps = 6/203 (2%)
Query: 127 EVEAAIRHLRNADRQLASLID----IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIY 182
+VEAA HL DR L + + I P P + P AL R+IL+QQL+ KA ++I
Sbjct: 9 DVEAAFAHLARRDRALGAWMKRIGAIAPQPGWRKPFDPVDALARAILFQQLSGKAASTIV 68
Query: 183 TRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNG-ILSDSAIVNM 241
R + + G + T+ + LR GVSG KA L DLAR+ G I S + M
Sbjct: 69 AR-VEVAIGAQRLHANTLGRIDDAALRACGVSGNKALALRDLARRESAGEIPSLRRLAFM 127
Query: 242 DDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQM 301
+D ++ L V GIG W+V M ++F L RPD+LPI+DLGVRKG Q + E +P P ++
Sbjct: 128 EDNAIVDALVPVRGIGRWTVEMMLMFRLGRPDLLPIDDLGVRKGAQRVDKQEHMPTPKEL 187
Query: 302 DQLCEKWRPYRSVASWYLWRFVE 324
E+W PYR+ A++YLW+ +
Sbjct: 188 AVRGERWGPYRTYAAFYLWKIAD 210
>gi|325277112|ref|ZP_08142761.1| DNA-3-methyladenine glycosylase II [Pseudomonas sp. TJI-51]
gi|324097754|gb|EGB95951.1| DNA-3-methyladenine glycosylase II [Pseudomonas sp. TJI-51]
Length = 208
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 101/163 (61%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R+I YQQL +A +I R +AL A PE +LA +PQ LR G S K +
Sbjct: 45 PYEALVRAIAYQQLHARAAEAILGRLLALFPQHAFPPPEQLLAASPQTLRACGFSASKLA 104
Query: 220 YLHDLARKYQNGIL-SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ +G++ + A + M D +L L + G+G W+V M +I+SL R D+LP++
Sbjct: 105 TIQGIAQARLDGLVPTREAALAMSDDALIERLVALRGVGRWTVEMLLIYSLERSDILPVD 164
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR+G + L L++ P P+QM L WRPYR+VA+WYLWR
Sbjct: 165 DFGVREGYRRLKGLDKAPTPAQMRSLGGAWRPYRTVAAWYLWR 207
>gi|21241986|ref|NP_641568.1| DNA-3-methyladenine glycosylase [Xanthomonas axonopodis pv. citri
str. 306]
gi|21107382|gb|AAM36104.1| DNA-3-methyladenine glycosylase [Xanthomonas axonopodis pv. citri
str. 306]
Length = 215
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 117/202 (57%), Gaps = 6/202 (2%)
Query: 128 VEAAIRHLRNADRQLASLID----IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYT 183
+EAA H+ DR L + + I P P + P AL R+IL+QQL+ KA ++I
Sbjct: 1 MEAAFAHVSRRDRALGAWMKRIGPIAPQPGWHKPFDPVDALARAILFQQLSGKAASTIVA 60
Query: 184 RFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNG-ILSDSAIVNMD 242
R + + G + +T+ + LR GVSG KA L DLAR+ G I S + MD
Sbjct: 61 R-VEVAIGAQRLHADTLGRIDDAALRACGVSGNKALALRDLARRESEGEIPSLRRLAFMD 119
Query: 243 DKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMD 302
++++ L V GIG W+V M ++F L RPD+LPI+DLGVRKG Q + E++P P ++
Sbjct: 120 EEAIVQALVPVRGIGRWTVEMMLMFRLGRPDLLPIDDLGVRKGAQRVDKQEQMPTPKELA 179
Query: 303 QLCEKWRPYRSVASWYLWRFVE 324
E+W PYR+ A++YLW+ +
Sbjct: 180 VRGERWGPYRTYAAFYLWKIAD 201
>gi|398883862|ref|ZP_10638810.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM60]
gi|398195904|gb|EJM82929.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM60]
Length = 205
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 72/163 (44%), Positives = 100/163 (61%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ +L R+I YQQL KAG +I R +AL A PE +LA QLR G S K +
Sbjct: 39 PYESLVRAIAYQQLHAKAGDAIVGRLLALFPSTAFPRPEQILATGFDQLRGCGFSASKIA 98
Query: 220 YLHDLARKYQNGILSDSAI-VNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ +G++ D A + MDD++L L + G+G W+V M +I+SL RPD+LP +
Sbjct: 99 TIQGIAQAALDGVVPDYATALAMDDEALIERLITLRGVGRWTVEMLLIYSLERPDILPAD 158
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR+G + L LE P QM ++ WRPYR+VASWYLWR
Sbjct: 159 DFGVREGYRRLKGLEVQPTRKQMVEIGLGWRPYRTVASWYLWR 201
>gi|452125632|ref|ZP_21938215.1| DNA-3-methyladenine glycosylase [Bordetella holmesii F627]
gi|452128993|ref|ZP_21941569.1| DNA-3-methyladenine glycosylase [Bordetella holmesii H558]
gi|451920727|gb|EMD70872.1| DNA-3-methyladenine glycosylase [Bordetella holmesii F627]
gi|451924863|gb|EMD75003.1| DNA-3-methyladenine glycosylase [Bordetella holmesii H558]
Length = 214
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 110/196 (56%), Gaps = 2/196 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
E A+ HL DR L +I H S TPF+ L R+I+ QQ++ KA +++ R + +
Sbjct: 15 EEAVAHLMRRDRILKKIIPQHSHTWLSSRGTPFVTLARAIIGQQISTKAADALWARLLEV 74
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
G P TVL LR G+S RKA Y+ DLA + + MDD+++ +
Sbjct: 75 AGKRP--TPATVLRAGVAGLRAAGLSQRKAEYVQDLADHFGQRKVHPERWATMDDEAVIS 132
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
L + GIG W+ MF+IF+L RPDVLP++DLG+ K + L Y E + ++ W
Sbjct: 133 ELVAIRGIGRWTAEMFLIFNLQRPDVLPLDDLGLLKAISLHYFSGEPVSRFEAREVSLAW 192
Query: 309 RPYRSVASWYLWRFVE 324
+P+R+VA+WYLWR +E
Sbjct: 193 QPWRTVATWYLWRSLE 208
>gi|440729868|ref|ZP_20909977.1| DNA-3-methyladenine glycosylase [Xanthomonas translucens DAR61454]
gi|440380067|gb|ELQ16639.1| DNA-3-methyladenine glycosylase [Xanthomonas translucens DAR61454]
Length = 224
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 116/203 (57%), Gaps = 6/203 (2%)
Query: 127 EVEAAIRHLRNADRQLASLID----IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIY 182
+ +AA HL DR+L + + I P P + P AL R+IL+QQL+ KA +I
Sbjct: 9 DTQAAYDHLSRRDRKLGAWMRRIGPIAPQPGWARPFDPVDALARAILFQQLSGKAAATIV 68
Query: 183 TRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNG-ILSDSAIVNM 241
R A G + +T+ + LR GVS KA L DLAR+ G I S + M
Sbjct: 69 GRVEAAIG-SIRLHADTLARIDDPGLRACGVSANKALALRDLARREAAGEIPSLRKLAFM 127
Query: 242 DDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQM 301
DD+++ L V GIG W+V M ++F L RPD+LP++DLGVRKG Q + L+++P P +
Sbjct: 128 DDEAIVQALLPVRGIGRWTVEMMLLFRLGRPDLLPVDDLGVRKGAQRVDQLQQMPAPQSL 187
Query: 302 DQLCEKWRPYRSVASWYLWRFVE 324
+ E+W PYRS AS+YLW+ +
Sbjct: 188 AEHGERWGPYRSYASFYLWKIAD 210
>gi|421081227|ref|ZP_15542141.1| Putative DNA-3-methyladenine glycosylase [Pectobacterium wasabiae
CFBP 3304]
gi|401704237|gb|EJS94446.1| Putative DNA-3-methyladenine glycosylase [Pectobacterium wasabiae
CFBP 3304]
Length = 220
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 105/166 (63%), Gaps = 2/166 (1%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R++ YQQL +AG ++ + + + + PE VLA + LRQ G S RKA
Sbjct: 44 PYEALMRAVAYQQLTTRAGDAMVAKLLRV-HDDVFPNPEQVLACSTDTLRQCGFSARKAD 102
Query: 220 YLHDLARKYQNGIL-SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
LH +A+ +G++ S DD +L LT + GIG W+V MF+I+SL R D++P++
Sbjct: 103 TLHGIAQGVLSGLVPSLEQAAERDDDTLIQQLTSLKGIGRWTVEMFLIYSLERTDIMPLD 162
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
DLG+R+G++ +Y L ++P+P + L +PYR+VASWYLWR +E
Sbjct: 163 DLGIRQGLRYVYDLPDMPKPRDLQALSLSCQPYRTVASWYLWRSLE 208
>gi|398844665|ref|ZP_10601723.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM84]
gi|398254364|gb|EJN39463.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM84]
Length = 204
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 100/163 (61%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R+I YQQL KAG +I RF+AL G A PE +LA + G S K +
Sbjct: 37 PYEALIRAIAYQQLHVKAGDAIVARFLALYPGLAFPAPEQLLATDADLQKACGFSANKLA 96
Query: 220 YLHDLARKYQNGILSDSAIV-NMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ + ++ A +M D L L + G+G W+V MF+I+SL R D+LP++
Sbjct: 97 TIRAIAQARLDDVVPTLAEARSMSDAELIERLVSLRGVGRWTVEMFLIYSLERTDILPVD 156
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
DLGVR+G + L LE+ P+P QM ++ E+W PYR+ A+WYLWR
Sbjct: 157 DLGVREGYRRLKGLEKAPKPRQMREIGERWSPYRTTAAWYLWR 199
>gi|58583147|ref|YP_202163.1| DNA-3-methyladenine glycosylase [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|84624987|ref|YP_452359.1| DNA-3-methyladenine glycosylase [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188575552|ref|YP_001912481.1| DNA-3-methyladenine glycosylase [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|58427741|gb|AAW76778.1| DNA-3-methyladenine glycosylase [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|84368927|dbj|BAE70085.1| DNA-3-methyladenine glycosylase [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188520004|gb|ACD57949.1| DNA-3-methyladenine glycosylase [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 224
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 114/203 (56%), Gaps = 6/203 (2%)
Query: 127 EVEAAIRHLRNADRQLASLID----IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIY 182
+VEAA HL DR L + + I P P + P AL R+IL+QQL+ KA ++I
Sbjct: 9 DVEAAFAHLARRDRALGAWMKRIGAIAPQPGWRKPFDPVDALARAILFQQLSGKAASTIV 68
Query: 183 TRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNG-ILSDSAIVNM 241
R G + + +T+ + LR GVSG KA L DL R+ G I S + M
Sbjct: 69 ARVKVAIGAQR-LHADTLGRIDDAALRACGVSGNKALALRDLVRRESAGEIPSLRRLAFM 127
Query: 242 DDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQM 301
+D ++ L V GIG W+V M ++F L RPD+LPI+DLGVRKG Q + E +P P ++
Sbjct: 128 EDNAIVDALVPVRGIGRWTVEMMLMFRLGRPDLLPIDDLGVRKGAQRVDKQEHMPTPKEL 187
Query: 302 DQLCEKWRPYRSVASWYLWRFVE 324
E+W PYR+ A++YLW+ +
Sbjct: 188 AVRGERWGPYRTYAAFYLWKIAD 210
>gi|312796648|ref|YP_004029570.1| DNA-3-methyladenine glycosylase II [Burkholderia rhizoxinica HKI
454]
gi|312168423|emb|CBW75426.1| DNA-3-methyladenine glycosylase II (EC 3.2.2.21) [Burkholderia
rhizoxinica HKI 454]
Length = 345
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 113/199 (56%), Gaps = 13/199 (6%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFH-----TPFLALTRSILYQQLAFKAGTSIYTRF 185
A L DR L LI P F H PF+ L RSI+ QQ++ A +I+ R
Sbjct: 149 ACADLVRRDRILKKLI-----PQFGPVHLMVRGDPFMTLARSIVGQQISVSAAQAIWARL 203
Query: 186 IALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKS 245
A C + P ++ L +L + G+S RK+ Y+ DLA+ + +G L ++ +MDD++
Sbjct: 204 AAAC---PSIAPARIVKLGQPRLIECGLSKRKSEYILDLAQHFTSGALHVASWASMDDEA 260
Query: 246 LFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLC 305
+ LT + GIG W+ MF+IF+L RP+VLP++DLG+ + + + Y E S+ ++
Sbjct: 261 VIDELTQIRGIGRWTAEMFLIFNLMRPNVLPLDDLGLIRAISVNYFSGEPVTRSEAREVA 320
Query: 306 EKWRPYRSVASWYLWRFVE 324
W P+R+VA+WY+WR +E
Sbjct: 321 ANWEPWRTVATWYMWRSLE 339
>gi|167042982|gb|ABZ07695.1| putative HhH-GPD superfamily base excision DNA repair protein
[uncultured marine microorganism HF4000_ANIW137P11]
Length = 209
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 116/196 (59%), Gaps = 4/196 (2%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
E A R L D LA++I+ S F L ++I+ QQ++ KA +++ R + L
Sbjct: 12 EDAKRRLCLIDPALAAVINAKGELGLSSRGDLFATLVKAIVGQQISIKAAATVWGRVVDL 71
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
G V PE+VLA T ++LR G+S RKA Y+ +A +Q G ++ +MDD+
Sbjct: 72 IGE---VKPESVLAHTHEELRSCGLSNRKAEYVAGIAEAWQGG-YAEYDWDSMDDERALE 127
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
+L + G+G W+ M +IF+L RPDV PI+DLGV +G++ +Y+ E+ ++++ + W
Sbjct: 128 LLVALRGVGRWTAEMVLIFTLLRPDVFPIDDLGVVRGMEKVYNEGEVLDKAELNDIASNW 187
Query: 309 RPYRSVASWYLWRFVE 324
P+R+V SWY+WR ++
Sbjct: 188 SPWRTVGSWYMWRAID 203
>gi|261820344|ref|YP_003258450.1| DNA-3-methyladenine glycosylase II [Pectobacterium wasabiae WPP163]
gi|261604357|gb|ACX86843.1| DNA-3-methyladenine glycosylase II [Pectobacterium wasabiae WPP163]
gi|385870518|gb|AFI89038.1| HhH-GPD family protein [Pectobacterium sp. SCC3193]
Length = 220
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 106/166 (63%), Gaps = 2/166 (1%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R++ YQQL +AG ++ + + + + PE +LA + LRQ G S RKA
Sbjct: 44 PYEALMRAVAYQQLTTRAGDAMVAKLLRV-HDDVFPSPEQMLACSTDTLRQCGFSARKAD 102
Query: 220 YLHDLARKYQNGIL-SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
LH +A+ +G++ S DD +L LT + GIG W+V MF+I+SL R D++P++
Sbjct: 103 TLHGIAQGALSGLVPSLEQAAERDDDTLIQQLTSLKGIGRWTVEMFLIYSLERTDIMPLD 162
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
DLG+R+G++ +Y L ++P+P + L + +PYR+VASWYLWR +E
Sbjct: 163 DLGIRQGLRYVYDLPDMPKPRDLQALSLQCQPYRTVASWYLWRSLE 208
>gi|350561583|ref|ZP_08930421.1| HhH-GPD family protein [Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349780615|gb|EGZ34933.1| HhH-GPD family protein [Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 206
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 111/193 (57%), Gaps = 3/193 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
E A L D +A+LI +P + PF L R+I+ QQ++ KA S++ RF A
Sbjct: 8 ERACADLAGTDPVMAALIARYPDAVLTTRGDPFQTLARAIVGQQISVKAADSVWQRFAAF 67
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
G V PE ++ L + L G+S RKA YL DLA + +G + + +M D+++
Sbjct: 68 VGS---VRPEQIVVLELESLAACGLSRRKAEYLRDLAGHFVDGRIQPARWESMTDEAVIA 124
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
L V GIG W+ MF+IF+L RPDV P++D+G++K V L Y E P P + + E+
Sbjct: 125 ELVDVRGIGRWTAEMFLIFNLLRPDVWPVDDIGLQKAVALHYLDNERPTPRTLRRHGERH 184
Query: 309 RPYRSVASWYLWR 321
P+R+VA+WYLWR
Sbjct: 185 APWRTVATWYLWR 197
>gi|37521587|ref|NP_924964.1| DNA-3-methyladenine glycosylase [Gloeobacter violaceus PCC 7421]
gi|35212585|dbj|BAC89959.1| gll2018 [Gloeobacter violaceus PCC 7421]
Length = 206
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 121/196 (61%), Gaps = 3/196 (1%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTF--DSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
A+ HL+ +D LA++I+ ++ + T F A+ R+I+YQQL+ KA +I+ R L
Sbjct: 12 AVGHLKRSDPILAAIIERVGDCSYQTSAAGTHFDAVVRAIVYQQLSGKAAATIHKRLCDL 71
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
G + P +LA+ LR +G+S +K +YL LA + ++G L+ + ++D+++
Sbjct: 72 FDGRPPL-PAELLAVEAAALRGVGLSRQKLNYLKSLAAQVESGALAIETLHILEDQAILA 130
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
L + GIG W+ MF++F L RP+VLP DLG++K +QL YSL+ LP P QM + E W
Sbjct: 131 ELMRLKGIGRWTAQMFLMFRLGRPNVLPEGDLGIQKAIQLAYSLKALPSPKQMAAVSEPW 190
Query: 309 RPYRSVASWYLWRFVE 324
PY ++A WYLWR +E
Sbjct: 191 HPYCTIACWYLWRSLE 206
>gi|194289324|ref|YP_002005231.1| DNA-3-methyladenine glycosylase ii [Cupriavidus taiwanensis LMG
19424]
gi|193223159|emb|CAQ69164.1| putative DNA-3-methyladenine glycosylase II [Cupriavidus
taiwanensis LMG 19424]
Length = 287
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 126/245 (51%), Gaps = 11/245 (4%)
Query: 88 PTESSKATSAKSTKSRAIQQQQQTLTVPRIIARPLSSEGEVEA--------AIRHLRNAD 139
P K TS +T+ A + +P A PL E +A A L D
Sbjct: 40 PLPDGKDTSKDTTRPAARAARNAKAVLPEAEAVPLPVETVADAVRPAYWDEACADLMKRD 99
Query: 140 RQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPET 199
R L +I + P S PF+ L R+++ QQ++ KA S++ R A+C + P
Sbjct: 100 RILRKMIPTYGPAHLVSRGDPFVTLARAVVGQQISVKAAQSVWERLHAVC---PRLAPAQ 156
Query: 200 VLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSW 259
L P++L GVS RKA YL DLA ++ G + + MDD+++ LT + GIG W
Sbjct: 157 FLRAGPEKLAGCGVSKRKAEYLIDLAAHFKAGTVHVAQWAQMDDEAVIAELTQIRGIGRW 216
Query: 260 SVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYL 319
+ MF++F+L RP+VLP++D+G+ + Y E S+ ++ W P+R+VA+WY+
Sbjct: 217 TAEMFLMFNLMRPNVLPLDDVGLINAISANYFSGEPVTRSEAREVAANWEPWRTVATWYM 276
Query: 320 WRFVE 324
WR ++
Sbjct: 277 WRSLD 281
>gi|430806606|ref|ZP_19433721.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Cupriavidus sp. HMR-1]
gi|429501115|gb|EKZ99460.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Cupriavidus sp. HMR-1]
Length = 261
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 117/216 (54%), Gaps = 11/216 (5%)
Query: 114 VPRIIARPLSSEGEVEA--------AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALT 165
+P + A PL E V+A A L DR L +I + P S PF+ L
Sbjct: 40 LPEVDAVPLPVETVVDAVRPAYWDEACADLMKRDRILRKMIPTYGPAHLVSRGDPFVTLA 99
Query: 166 RSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLA 225
RSI+ QQ++ KA S++ R A+C + P L P++L G+S RKA Y+ DLA
Sbjct: 100 RSIVGQQISVKAAQSVWERLAAMC---PRLTPAQFLKSGPEELAGCGLSKRKAEYIIDLA 156
Query: 226 RKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKG 285
++ G + V MDD+++ LT + GIG W+ MF++F+L RP+VLP++D+G+
Sbjct: 157 DHFKAGRVHVKEWVAMDDEAVIAELTQIRGIGRWTAEMFLMFNLMRPNVLPLDDVGLINA 216
Query: 286 VQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
+ Y E S+ ++ W P+R+VA+WY+WR
Sbjct: 217 ISTNYFSGEPVTRSEAREVAANWEPWRTVATWYMWR 252
>gi|241662707|ref|YP_002981067.1| HhH-GPD family protein [Ralstonia pickettii 12D]
gi|240864734|gb|ACS62395.1| HhH-GPD family protein [Ralstonia pickettii 12D]
Length = 290
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 112/192 (58%), Gaps = 5/192 (2%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A L DR L +I + P S PF+ L RSI+ QQ++ KA S++ R +A+C
Sbjct: 95 ACADLMKRDRILRKIIPTYGPAHLASRGDPFVTLARSIVGQQISVKAAQSVWERVVAVC- 153
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
+VP L ++L G+S RKA Y+ DLA ++NG + + M+D+ + L
Sbjct: 154 --PKLVPAQFLRAGQERLAGCGLSKRKAEYILDLADHFRNGTVHVAKWAEMEDEDVIAEL 211
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV-QLLYSLEELPRPSQMDQLCEKWR 309
T + GIG W+ MF++F+L RP+VLP++D+G+ + Q +S E + R S+ ++ W
Sbjct: 212 TQIRGIGRWTAEMFLMFNLMRPNVLPLDDIGLINAISQNYFSGEPVTR-SEAREVAANWE 270
Query: 310 PYRSVASWYLWR 321
P+R+VA+WY+WR
Sbjct: 271 PWRTVATWYMWR 282
>gi|393775409|ref|ZP_10363722.1| 3-methyladenine dna glycosylase 8-oxoguanine dna glycosylase
[Ralstonia sp. PBA]
gi|392717459|gb|EIZ05020.1| 3-methyladenine dna glycosylase 8-oxoguanine dna glycosylase
[Ralstonia sp. PBA]
Length = 283
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 111/196 (56%), Gaps = 3/196 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A + L DR L +I + P S PF+ L RS++ QQ++ KA +++ R A
Sbjct: 85 DEACQDLMKRDRILRKIIPAYGPAHLVSRGDPFVTLARSVVGQQISVKAAHAVWERVAAA 144
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C + P +L P++L G+S RKA Y+ DLA ++ G L + MDD+ +
Sbjct: 145 C---PKLTPAQMLRAGPEKLATCGLSKRKAEYILDLASHFKAGHLHVADWATMDDEDVIA 201
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
L + GIG W+ MF++F+L RP+VLP++DLG+ K + + Y E S+ ++ W
Sbjct: 202 ELVQIRGIGRWTAEMFLMFNLMRPNVLPLDDLGLIKAISVNYFSGEPVTRSEAREVAANW 261
Query: 309 RPYRSVASWYLWRFVE 324
P+R+VA+WYLWR +E
Sbjct: 262 EPWRTVATWYLWRSLE 277
>gi|384427016|ref|YP_005636374.1| DNA-3-methyladenine glycosylase [Xanthomonas campestris pv. raphani
756C]
gi|341936117|gb|AEL06256.1| DNA-3-methyladenine glycosylase [Xanthomonas campestris pv. raphani
756C]
Length = 224
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 117/203 (57%), Gaps = 6/203 (2%)
Query: 127 EVEAAIRHLRNADRQLASLID----IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIY 182
+VE A HL +DR L + + I P P + P AL R+IL+QQL+ KA +I
Sbjct: 9 DVEMAFTHLARSDRALGAWMRRIGPIAPQPGWRKPFDPVDALARAILFQQLSGKAAATIV 68
Query: 183 TRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNG-ILSDSAIVNM 241
R + + G + + +T+ + LR GVSG KA L DLAR+ G I S + M
Sbjct: 69 GR-VEVAIGASRLHADTLGRVDDAALRACGVSGNKALALRDLARREALGEIPSLRKLAFM 127
Query: 242 DDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQM 301
+D ++ L V GIG W+V M ++F L RPD+LPI+DLGVRKG Q + ++P P ++
Sbjct: 128 EDDAIVEALVPVRGIGRWTVEMMLMFRLGRPDLLPIDDLGVRKGAQRVDKQAQMPTPKEL 187
Query: 302 DQLCEKWRPYRSVASWYLWRFVE 324
+ E+W PYR+ A++YLW+ +
Sbjct: 188 AERGERWGPYRTYAAFYLWKIAD 210
>gi|33592951|ref|NP_880595.1| DNA-3-methyladenine glycosylase [Bordetella pertussis Tohama I]
gi|384204249|ref|YP_005589988.1| DNA-3-methyladenine glycosylase [Bordetella pertussis CS]
gi|408414907|ref|YP_006625614.1| DNA-3-methyladenine glycosylase [Bordetella pertussis 18323]
gi|410419429|ref|YP_006899878.1| DNA-3-methyladenine glycosylase [Bordetella bronchiseptica MO149]
gi|410472140|ref|YP_006895421.1| DNA-3-methyladenine glycosylase [Bordetella parapertussis Bpp5]
gi|427820328|ref|ZP_18987391.1| DNA-3-methyladenine glycosylase [Bordetella bronchiseptica D445]
gi|427824699|ref|ZP_18991761.1| DNA-3-methyladenine glycosylase [Bordetella bronchiseptica Bbr77]
gi|33572599|emb|CAE42191.1| DNA-3-methyladenine glycosylase [Bordetella pertussis Tohama I]
gi|332382363|gb|AEE67210.1| DNA-3-methyladenine glycosylase [Bordetella pertussis CS]
gi|401777077|emb|CCJ62333.1| DNA-3-methyladenine glycosylase [Bordetella pertussis 18323]
gi|408442250|emb|CCJ48772.1| DNA-3-methyladenine glycosylase [Bordetella parapertussis Bpp5]
gi|408446724|emb|CCJ58394.1| DNA-3-methyladenine glycosylase [Bordetella bronchiseptica MO149]
gi|410571328|emb|CCN19553.1| DNA-3-methyladenine glycosylase [Bordetella bronchiseptica D445]
gi|410589964|emb|CCN05040.1| DNA-3-methyladenine glycosylase [Bordetella bronchiseptica Bbr77]
Length = 214
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 109/194 (56%), Gaps = 2/194 (1%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A+ HL DR L +I H S +PF+ L R+I+ QQ++ KA +++ RF+ G
Sbjct: 17 AVAHLMRRDRILKRIIPQHGETWLTSRGSPFVTLARAIIGQQISVKAADALWQRFLETVG 76
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
P TVL LR G+S RKA YL DLA + ++ MDD+++ L
Sbjct: 77 KRP--TPATVLRAGVPALRAAGLSQRKAEYLVDLATHFGQRLVHPEKWAAMDDEAVIAEL 134
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRP 310
+ GIG W+ MF+IF+L RPDVLP++DLG+ K + L Y E + ++ W+P
Sbjct: 135 VAIRGIGRWTAEMFLIFNLQRPDVLPLDDLGLLKAISLHYFSGEPVSRFEAREVSLAWQP 194
Query: 311 YRSVASWYLWRFVE 324
+R+VA+WYLWR +E
Sbjct: 195 WRTVATWYLWRSLE 208
>gi|390956209|ref|YP_006419966.1| 3-methyladenine DNA glycosylase [Terriglobus roseus DSM 18391]
gi|390411127|gb|AFL86631.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Terriglobus roseus DSM 18391]
Length = 238
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/214 (39%), Positives = 115/214 (53%), Gaps = 16/214 (7%)
Query: 127 EVEAAIRHLRNADRQLASLIDIHPPPTF--DSFHTPFLALTRSILYQQLAFKAGTSIYTR 184
+ E AI L AD +LA LI+ P +PF +L SI+YQQL KA +I+ R
Sbjct: 13 DAEEAIAALSAADPKLARLIERAGPLRLRISGSLSPFESLAESIIYQQLHGKAAAAIHQR 72
Query: 185 FIALCGGEAGV----VPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGIL-SDSAIV 239
I AG+ P+ +L QLR G+S K L DLA K +G + S I
Sbjct: 73 MIEGFAEVAGIGEHPSPQHLLDCPTAQLRAAGLSANKTLALRDLAAKTIDGTVPSLPKIR 132
Query: 240 NMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSL------- 292
M D+++ LT V GIG W+V M +IF L RPDV P +D GVRKG L +
Sbjct: 133 RMTDEAIIEHLTQVRGIGRWTVEMMLIFRLGRPDVFPTSDYGVRKGFALTFGKLKPTDKV 192
Query: 293 --EELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
+LP+P++M++ +KW P+ SVASWYLWR +
Sbjct: 193 APGDLPKPAEMEKRAKKWHPWCSVASWYLWRACD 226
>gi|325927247|ref|ZP_08188504.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Xanthomonas perforans 91-118]
gi|325542367|gb|EGD13852.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Xanthomonas perforans 91-118]
Length = 224
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 117/203 (57%), Gaps = 6/203 (2%)
Query: 127 EVEAAIRHLRNADRQLASLID----IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIY 182
+VEAA H+ R L + + I P P + P AL R+IL+QQL+ KA ++I
Sbjct: 9 DVEAAFAHVSRRYRALGAWMKRIGPIAPQPGWHKPFDPVDALARAILFQQLSGKAASTIV 68
Query: 183 TRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNG-ILSDSAIVNM 241
R + + G + +T+ + LR GVSG KA L DLAR+ + G I S + M
Sbjct: 69 AR-VEVAIGAQRLHADTLGRIDDAALRACGVSGNKALALRDLARREREGEIPSLRRLAFM 127
Query: 242 DDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQM 301
D+ ++ L V GIG W+V M ++F L RPD+LPI+DLGVRKG Q + E++P P ++
Sbjct: 128 DEDAIVQALVPVRGIGRWTVEMMLMFRLGRPDLLPIDDLGVRKGAQRVDKQEQMPTPREL 187
Query: 302 DQLCEKWRPYRSVASWYLWRFVE 324
E+W PYR+ A++YLW+ +
Sbjct: 188 AARGERWGPYRTYAAFYLWKIAD 210
>gi|386010361|ref|YP_005928638.1| DNA-3-methyladenine glycosylase II [Pseudomonas putida BIRD-1]
gi|313497067|gb|ADR58433.1| DNA-3-methyladenine glycosylase II [Pseudomonas putida BIRD-1]
Length = 208
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 100/163 (61%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R+I YQQL +A +I R +AL + PE +LA+TP+ LR G S K
Sbjct: 45 PYEALVRAIAYQQLHARAAEAILGRLLALFPADDFPQPEQLLAVTPETLRACGFSASKLV 104
Query: 220 YLHDLARKYQNGIL-SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ G++ + +NM D++L L + G+G W+V M +I+SL R D+LP++
Sbjct: 105 TVQGIAQATLEGLVPTREQALNMADEALIERLVALRGVGRWTVEMLLIYSLGRSDILPVD 164
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR+G + L LE P P+QM L WRP+R+VA+WYLWR
Sbjct: 165 DFGVREGYRRLKGLETAPTPAQMRSLGGAWRPFRTVAAWYLWR 207
>gi|407803937|ref|ZP_11150768.1| DNA-3-methyladenine glycosylase II [Alcanivorax sp. W11-5]
gi|407022187|gb|EKE33943.1| DNA-3-methyladenine glycosylase II [Alcanivorax sp. W11-5]
Length = 213
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 111/198 (56%), Gaps = 4/198 (2%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTF--DSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
A+RHL AD +I P D+ +P+ AL R+++YQQL +A +I R +AL
Sbjct: 11 ALRHLCRADPDWLPVIRRVGPCGLTPDNGRSPYEALARAVIYQQLHGRAAAAITARLLAL 70
Query: 189 CGG-EAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGIL-SDSAIVNMDDKSL 246
G E P +LA LR G+S K + L +A G++ + S +DD++L
Sbjct: 71 YGKRERFPQPAALLATPVDTLRACGLSANKVATLQGIAEGKLGGVIPTRSQAARLDDEAL 130
Query: 247 FTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCE 306
LT + G+G W+V M ++ +L+RPDV+P D GVR+G +LL L P P + + E
Sbjct: 131 IERLTTLRGVGRWTVEMLLMHTLNRPDVMPAGDFGVREGWRLLKGLPAQPAPKALLAISE 190
Query: 307 KWRPYRSVASWYLWRFVE 324
WRPYRS A+WYLWR V+
Sbjct: 191 AWRPYRSTAAWYLWRVVD 208
>gi|339484860|ref|YP_004696646.1| HhH-GPD family protein [Nitrosomonas sp. Is79A3]
gi|338807005|gb|AEJ03247.1| HhH-GPD family protein [Nitrosomonas sp. Is79A3]
Length = 231
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 110/191 (57%), Gaps = 3/191 (1%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
AI+ L D+ + LI T S F L RSI+ QQ++ KA S++ + I
Sbjct: 35 AIQELAACDKVMHQLIRQFEDATLTSRGCAFTTLARSIVGQQISVKAAESVWQKVIR--- 91
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
+ P T+ A+ LR G+S RK +YL DL+R + L+++ + MDD+++ L
Sbjct: 92 AIPDMTPHTIAAVEQDLLRACGLSARKITYLQDLSRHFIEESLNETIWIEMDDEAIIQQL 151
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRP 310
T V GIG W+ MF+IF L RPDVLP++D+G+++ + Y ++ M +L + W+P
Sbjct: 152 TEVKGIGRWTAEMFLIFHLQRPDVLPLDDIGLQRAISQHYYDKQPVDKKTMLELAKPWQP 211
Query: 311 YRSVASWYLWR 321
+RSVA+WYLWR
Sbjct: 212 WRSVATWYLWR 222
>gi|295676872|ref|YP_003605396.1| HhH-GPD family protein [Burkholderia sp. CCGE1002]
gi|295436715|gb|ADG15885.1| HhH-GPD family protein [Burkholderia sp. CCGE1002]
Length = 368
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 113/196 (57%), Gaps = 3/196 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P S PF+ L RS++ QQ++ + +++ + A
Sbjct: 170 DKACADLVKRDRILKKLIPKFGPVHLLSRGDPFVTLARSVVGQQISVASAQAVWAKVEAA 229
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C +VP+ + L ++L G+S RKA Y+ DLAR + +G L +MDD+++ +
Sbjct: 230 C---PKLVPQQFIKLGLEKLTACGLSKRKAEYVLDLARHFVSGALHVGKWTSMDDEAVIS 286
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GIG W+ MF+IF+L RPDVLP++DLG+ + + + Y E S+ ++ W
Sbjct: 287 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 346
Query: 309 RPYRSVASWYLWRFVE 324
P+R+VA+WY+WR ++
Sbjct: 347 EPWRTVATWYMWRSLD 362
>gi|33596887|ref|NP_884530.1| DNA-3-methyladenine glycosylase [Bordetella parapertussis 12822]
gi|33600721|ref|NP_888281.1| DNA-3-methyladenine glycosylase [Bordetella bronchiseptica RB50]
gi|412339089|ref|YP_006967844.1| DNA-3-methyladenine glycosylase [Bordetella bronchiseptica 253]
gi|427813893|ref|ZP_18980957.1| DNA-3-methyladenine glycosylase [Bordetella bronchiseptica 1289]
gi|33568321|emb|CAE32233.1| DNA-3-methyladenine glycosylase [Bordetella bronchiseptica RB50]
gi|33573588|emb|CAE37582.1| DNA-3-methyladenine glycosylase [Bordetella parapertussis]
gi|408768923|emb|CCJ53696.1| DNA-3-methyladenine glycosylase [Bordetella bronchiseptica 253]
gi|410564893|emb|CCN22441.1| DNA-3-methyladenine glycosylase [Bordetella bronchiseptica 1289]
Length = 214
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 109/194 (56%), Gaps = 2/194 (1%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A+ HL DR L +I H S +PF+ L R+I+ QQ++ KA +++ RF+ G
Sbjct: 17 AVAHLMRRDRILKRIIPQHGETWLTSRGSPFVTLARAIIGQQISVKAADALWQRFLETVG 76
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
P TVL LR G+S RKA YL DLA + ++ MDD+++ L
Sbjct: 77 KRP--TPATVLRAGLPALRAAGLSQRKAEYLVDLATHFGQRLVHPEKWAAMDDEAVIAEL 134
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRP 310
+ GIG W+ MF+IF+L RPDVLP++DLG+ K + L Y E + ++ W+P
Sbjct: 135 VAIRGIGRWTAEMFLIFNLQRPDVLPLDDLGLLKAISLHYFSGEPVSRFEAREVSLAWQP 194
Query: 311 YRSVASWYLWRFVE 324
+R+VA+WYLWR +E
Sbjct: 195 WRTVATWYLWRSLE 208
>gi|448546388|ref|ZP_21626552.1| DNA-3-methyladenine glycosylase [Haloferax sp. ATCC BAA-646]
gi|448548375|ref|ZP_21627642.1| DNA-3-methyladenine glycosylase [Haloferax sp. ATCC BAA-645]
gi|448557569|ref|ZP_21632758.1| DNA-3-methyladenine glycosylase [Haloferax sp. ATCC BAA-644]
gi|445702841|gb|ELZ54781.1| DNA-3-methyladenine glycosylase [Haloferax sp. ATCC BAA-646]
gi|445714126|gb|ELZ65893.1| DNA-3-methyladenine glycosylase [Haloferax sp. ATCC BAA-644]
gi|445714470|gb|ELZ66232.1| DNA-3-methyladenine glycosylase [Haloferax sp. ATCC BAA-645]
Length = 193
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 110/196 (56%), Gaps = 9/196 (4%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A R LR AD L ++D H P + D PF L SI+ QQL+ A +I R
Sbjct: 5 AYRELR-ADPHLGDVVDEHGPLSLDPADDPFERLVVSIVNQQLSTTAAATIRDRLF---- 59
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
V PE +LA LR G+S +K Y+ ++A +++G LS ++ MDD + L
Sbjct: 60 DRVEVTPEGILAADESVLRDCGLSNQKVGYVRNVADAFRDG-LSAESLREMDDGEVVAAL 118
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEE--LPRPSQMDQLCEKW 308
T + G+G W+ MF+IF L R DV P+ DLG+R+G++ ++ E +PR +M + E+W
Sbjct: 119 TEIRGVGDWTAKMFLIFVLAREDVFPVEDLGIRRGMEHVFGFERDAVPR-GEMRERAERW 177
Query: 309 RPYRSVASWYLWRFVE 324
PYRS AS YLWR V+
Sbjct: 178 APYRSYASRYLWRCVD 193
>gi|113867242|ref|YP_725731.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Ralstonia eutropha H16]
gi|113526018|emb|CAJ92363.1| 3-Methyladenine DNA glycosylase/8-oxoguanine DNAglycosylase
[Ralstonia eutropha H16]
Length = 279
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 142/288 (49%), Gaps = 24/288 (8%)
Query: 45 NATITHANVTPQTSSPPSKIPLRPRKIRKLSPDNGVDQASSSQPTESSKATSAKSTKSRA 104
A + A P ++PP+ R R ++ P G A + P K T+ + ++A
Sbjct: 2 EACLNAAARKPAIATPPAT---RGR-VKAAGPRPGKAGAKEA-PLPDGKDTARDTRNAKA 56
Query: 105 IQQQQQTLTVPRIIARPLSSEGEVEA--------AIRHLRNADRQLASLIDIHPPPTFDS 156
+ +P A PL E ++A A L DR L +I + P S
Sbjct: 57 V--------LPEADAVPLPVETVIDAVRPAYWDEACADLMKRDRILRKMIPTYGPAHLVS 108
Query: 157 FHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGR 216
PF+ L R+++ QQ++ KA S++ R ALC + P L P++L G+S R
Sbjct: 109 RGDPFVTLARAVVGQQISVKAAQSVWERLHALC---PRLTPAQFLRAGPEKLAGCGLSKR 165
Query: 217 KASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLP 276
K YL DLA ++ G + MDD+++ LT + GIG W+ MF++F+L RP+VLP
Sbjct: 166 KGEYLVDLADHFKAGTVHVGEWAQMDDEAVIAELTQIRGIGRWTAEMFLMFNLMRPNVLP 225
Query: 277 INDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
++D+G+ + Y E S+ ++ W P+R+VA+WY+WR ++
Sbjct: 226 LDDIGLINAISANYFSGEPVTRSEAREVAANWEPWRTVATWYMWRSLD 273
>gi|339485636|ref|YP_004700164.1| DNA-3-methyladenine glycosylase II [Pseudomonas putida S16]
gi|338836479|gb|AEJ11284.1| DNA-3-methyladenine glycosylase II [Pseudomonas putida S16]
Length = 208
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 101/163 (61%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ L R+I YQQL +A +I R +AL A PE +LA+TP+ +R G S K +
Sbjct: 45 PYEVLVRAIAYQQLHARAAEAILGRLLALFPEAAFPGPEQLLAVTPETMRACGFSASKMA 104
Query: 220 YLHDLARKYQNGIL-SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ +G++ S + M D++L L + G+G W+V M +I+SL R DVLP++
Sbjct: 105 TIQGIAQGRLDGLVPSREEALAMADEALIERLVALRGVGRWTVEMLLIYSLARSDVLPVD 164
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR+G + L L++ P P+QM L WRPYR+VA+WYLWR
Sbjct: 165 DFGVREGYRRLKGLDKAPTPAQMRSLGGGWRPYRTVAAWYLWR 207
>gi|209518044|ref|ZP_03266875.1| DNA-3-methyladenine glycosylase II [Burkholderia sp. H160]
gi|209501548|gb|EEA01573.1| DNA-3-methyladenine glycosylase II [Burkholderia sp. H160]
Length = 372
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 112/196 (57%), Gaps = 3/196 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P S PF+ L RS++ QQ++ A +++ R A
Sbjct: 174 DKACADLVKRDRILKKLIPKFGPVHLLSRGDPFVTLARSVVGQQISVAAAQAVWGRVEAA 233
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C +VP+ + L ++L G+S RKA Y+ DLA+ + +G L +MDD+++
Sbjct: 234 C---PKLVPQQFIKLGLEKLTACGLSKRKAEYVLDLAQHFVSGALHVGKWTSMDDEAVIA 290
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GIG W+ MF+IF+L RPDVLP++DLG+ + + + Y E S+ ++ W
Sbjct: 291 ELTQIRGIGRWTSEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 350
Query: 309 RPYRSVASWYLWRFVE 324
P+R+VA+WY+WR ++
Sbjct: 351 EPWRTVATWYMWRSLD 366
>gi|398842762|ref|ZP_10599936.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM102]
gi|398105354|gb|EJL95461.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM102]
Length = 205
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 100/163 (61%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ +L R+I YQQL KAG +I R +AL PE +LA +Q+R G S K +
Sbjct: 39 PYESLVRAIAYQQLHAKAGDAIVGRLLALFPSSTFPRPEQILATDFEQMRGCGFSASKIA 98
Query: 220 YLHDLARKYQNGILSDSAI-VNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ +G++ D A + MDD++L L + G+G W+V M +I+SL RPD+LP +
Sbjct: 99 TIQGIAQAALDGVVPDYATALAMDDEALIERLITLRGVGRWTVEMLLIYSLERPDILPAD 158
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR+G + L LE P QM ++ WRPYR+VA+WYLWR
Sbjct: 159 DFGVREGYRRLKGLEMQPTRKQMIEIGLAWRPYRTVAAWYLWR 201
>gi|292656929|ref|YP_003536826.1| DNA-3-methyladenine glycosylase [Haloferax volcanii DS2]
gi|448290928|ref|ZP_21482073.1| DNA-3-methyladenine glycosylase [Haloferax volcanii DS2]
gi|291372617|gb|ADE04844.1| DNA-3-methyladenine glycosylase [Haloferax volcanii DS2]
gi|445577981|gb|ELY32401.1| DNA-3-methyladenine glycosylase [Haloferax volcanii DS2]
Length = 193
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 111/197 (56%), Gaps = 7/197 (3%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A R LR AD L ++D H P + D PF L SI+ QQL+ A +I R
Sbjct: 3 DDAYRELR-ADPNLGDVVDEHGPLSLDPADDPFERLVVSIVNQQLSTTAAATIRDRLF-- 59
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
V PE +LA+ LR G+S +K Y+ ++A +++G LS ++ MDD + +
Sbjct: 60 --DRVEVTPEGILAVDEDVLRDCGLSNQKVGYVRNVADAFRDG-LSAESLREMDDGEVVS 116
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLE-ELPRPSQMDQLCEK 307
LT + G+G W+ MF+IF L R DV P+ DLG+R+G++ ++ E + +M + E+
Sbjct: 117 ALTEIRGVGDWTAKMFLIFVLAREDVFPVEDLGIRRGMEHVFGFEQDAVSRGEMRERAER 176
Query: 308 WRPYRSVASWYLWRFVE 324
W PYRS AS YLWR V+
Sbjct: 177 WAPYRSYASRYLWRCVD 193
>gi|398922522|ref|ZP_10660314.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM49]
gi|398162605|gb|EJM50793.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM49]
Length = 205
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 100/163 (61%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ +L R+I YQQL KAG +I R +AL G + PE ++A QLR G S K +
Sbjct: 39 PYESLVRAIAYQQLHAKAGDAIVGRLLALFGSGSFPRPEQIVATDFDQLRSCGFSASKIT 98
Query: 220 YLHDLARKYQNGILSDSAI-VNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ +G++ D A + MDD++L L + G+G W+V M +I+SL RPD+LP +
Sbjct: 99 TIQGIAQASLDGVVPDYATALAMDDEALIERLITLRGVGRWTVEMLLIYSLERPDILPAD 158
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR+G + L L+ P QM ++ W PYR+VASWYLWR
Sbjct: 159 DFGVREGYRRLKGLQVQPTRKQMIEIGSAWSPYRTVASWYLWR 201
>gi|325914878|ref|ZP_08177213.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Xanthomonas vesicatoria ATCC 35937]
gi|325538969|gb|EGD10630.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Xanthomonas vesicatoria ATCC 35937]
Length = 224
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 125/227 (55%), Gaps = 16/227 (7%)
Query: 127 EVEAAIRHLRNADRQLASLID----IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIY 182
+VEAA L DR L + + I P P + P AL R+IL+QQL+ KA ++I
Sbjct: 9 DVEAAFAQLSRRDRALGAWMKRIGPIAPQPGWRKPFDPVDALARAILFQQLSGKAASTIV 68
Query: 183 TRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNG-ILSDSAIVNM 241
R + + G + + +T+ + LR GVSG KA L DL R+ G I S + M
Sbjct: 69 AR-VEVAIGSSRLHADTLGRVDDAALRACGVSGNKALALRDLVRREALGEIPSLRKLAFM 127
Query: 242 DDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQM 301
+D ++ L V GIG W+V M ++F L RPD+LPI+DLGVRKG Q + E++P P ++
Sbjct: 128 EDDAIVEALVPVRGIGRWTVEMMLMFRLGRPDLLPIDDLGVRKGAQRVDKQEQMPTPKEL 187
Query: 302 DQLCEKWRPYRSVASWYLWRFVEAKGAPSSAAAVAAGAALPQPQQEE 348
+ ++W PYR+ A++YLW+ + + A +P P+ +E
Sbjct: 188 AERGQRWGPYRTYAAFYLWKIAD----------FSVAAKVPTPRSQE 224
>gi|294666928|ref|ZP_06732158.1| DNA-3-methyladenine glycosylase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292603300|gb|EFF46721.1| DNA-3-methyladenine glycosylase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 224
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 117/203 (57%), Gaps = 6/203 (2%)
Query: 127 EVEAAIRHLRNADRQLASLID----IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIY 182
+VEAA H+ DR L + + I P P + P AL R+IL+QQL+ KA ++I
Sbjct: 9 DVEAAFAHVSRRDRALGAWMKRIGPIAPQPGWHKPFDPVDALARAILFQQLSGKAASTIV 68
Query: 183 TRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNG-ILSDSAIVNM 241
R + + G + +T+ + LR VSG KA L DLAR+ G I S + M
Sbjct: 69 AR-VEMAIGAQRLHADTLGRIDDAVLRACCVSGNKALALRDLARRESEGEIPSLRRLAFM 127
Query: 242 DDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQM 301
D++++ L V GIG W+V M ++F L RPD+LPI+DLGVRKG Q + E++P P ++
Sbjct: 128 DEEAIVQALVPVRGIGRWTVEMMLMFRLGRPDLLPIDDLGVRKGAQRVDRQEQMPTPREL 187
Query: 302 DQLCEKWRPYRSVASWYLWRFVE 324
E+W PYR+ A++YLW+ +
Sbjct: 188 AVRGERWGPYRTYAAFYLWKIAD 210
>gi|309781264|ref|ZP_07676001.1| base excision DNA repair protein, HhH-GPD family [Ralstonia sp.
5_7_47FAA]
gi|308920085|gb|EFP65745.1| base excision DNA repair protein, HhH-GPD family [Ralstonia sp.
5_7_47FAA]
Length = 294
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 111/192 (57%), Gaps = 5/192 (2%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A L DR L +I P S PF+ L RSI+ QQ++ KA S++ R +A+C
Sbjct: 99 ACADLMKRDRILRKIIPTCGPAHLASRGDPFVTLARSIVGQQISVKAAQSVWERVVAVC- 157
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
+VP L ++L G+S RKA Y+ DLA ++NG + + M+D+ + L
Sbjct: 158 --PKLVPAQFLRAGQEKLAGCGLSKRKAEYILDLADHFRNGTVHVAKWAEMEDQDVIAEL 215
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV-QLLYSLEELPRPSQMDQLCEKWR 309
T + GIG W+ MF++F+L RP+VLP++D+G+ + Q +S E + R S+ ++ W
Sbjct: 216 TQIRGIGRWTAEMFLMFNLMRPNVLPLDDIGLINAISQNYFSGEPVTR-SEAREVAANWE 274
Query: 310 PYRSVASWYLWR 321
P+R+VA+WY+WR
Sbjct: 275 PWRTVATWYMWR 286
>gi|407713994|ref|YP_006834559.1| DNA-3-methyladenine glucosyllase II [Burkholderia phenoliruptrix
BR3459a]
gi|407236178|gb|AFT86377.1| DNA-3-methyladenine glucosyllase II [Burkholderia phenoliruptrix
BR3459a]
Length = 364
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 113/196 (57%), Gaps = 3/196 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P S PF+ L RS++ QQ++ + +++T+ A
Sbjct: 166 DKACADLVKRDRILKKLIPKFGPVHLLSRGDPFVTLARSVVGQQISVASAQAVWTKVAAA 225
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C +VP+ + L ++L G+S RKA Y+ DLA+ + +G L +M+D+++
Sbjct: 226 C---PKLVPQQFIKLGQEKLTACGLSKRKAEYVLDLAQHFVSGALHVGKWQSMEDEAVIA 282
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GIG W+ MF+IF+L RPDVLP++DLG+ + + + Y E S+ ++ W
Sbjct: 283 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 342
Query: 309 RPYRSVASWYLWRFVE 324
P+R+VA+WY+WR ++
Sbjct: 343 EPWRTVATWYMWRSLD 358
>gi|404393824|ref|ZP_10985628.1| hypothetical protein HMPREF0989_01720 [Ralstonia sp. 5_2_56FAA]
gi|348615634|gb|EGY65145.1| hypothetical protein HMPREF0989_01720 [Ralstonia sp. 5_2_56FAA]
Length = 290
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 111/192 (57%), Gaps = 5/192 (2%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A L DR L +I P S PF+ L RSI+ QQ++ KA S++ R +A+C
Sbjct: 95 ACADLMKRDRILRKIIPTCGPAHLASRGDPFVTLARSIVGQQISVKAAQSVWERVVAVC- 153
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
+VP L ++L G+S RKA Y+ DLA ++NG + + M+D+ + L
Sbjct: 154 --PKLVPAQFLRAGQEKLAGCGLSKRKAEYILDLADHFRNGTVHVAKWAEMEDQDVIAEL 211
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV-QLLYSLEELPRPSQMDQLCEKWR 309
T + GIG W+ MF++F+L RP+VLP++D+G+ + Q +S E + R S+ ++ W
Sbjct: 212 TQIRGIGRWTAEMFLMFNLMRPNVLPLDDIGLINAISQNYFSGEPVTR-SEAREVAANWE 270
Query: 310 PYRSVASWYLWR 321
P+R+VA+WY+WR
Sbjct: 271 PWRTVATWYMWR 282
>gi|124267641|ref|YP_001021645.1| DNA-3-methyladenine glycosylase [Methylibium petroleiphilum PM1]
gi|124260416|gb|ABM95410.1| DNA-3-methyladenine glycosylase [Methylibium petroleiphilum PM1]
Length = 217
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 112/196 (57%), Gaps = 4/196 (2%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A +HL DR + LI +S F L RSI+ QQ++ A +++ RF AL
Sbjct: 15 DEACKHLAKRDRVMRKLIPKLGEARLESRGDAFTTLARSIVGQQISVPAAQAVWERFAAL 74
Query: 189 C-GGEA-GVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSL 246
GG A V P VLA LR G+S RK YL DLA + G + +MDD+S+
Sbjct: 75 FEGGSAVHVRPAGVLAADSAALRGAGLSARKIEYLRDLAGHFDGGTVHVRNWTSMDDESI 134
Query: 247 FTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV-QLLYSLEELPRPSQMDQLC 305
L + GIG W+ MF+IF L RP+VLP++DLG+ KG+ Q +S E + R ++ ++
Sbjct: 135 IDELVAIRGIGRWTAEMFLIFHLMRPNVLPLDDLGLLKGISQHYFSGEPVSR-NEAREVG 193
Query: 306 EKWRPYRSVASWYLWR 321
+ W P+RSVA+WYLWR
Sbjct: 194 DAWAPFRSVATWYLWR 209
>gi|399001184|ref|ZP_10703902.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM18]
gi|398128377|gb|EJM17768.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM18]
Length = 205
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 99/163 (60%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ +L R+I YQQL KAG +I R +AL PE +LA +Q+R G S K +
Sbjct: 39 PYESLVRAIAYQQLHAKAGDAIVGRLLALFPTSTFPRPEQILATDFEQMRGCGFSASKIA 98
Query: 220 YLHDLARKYQNGILSDSAI-VNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ +G++ D A + MDD++L L + G+G W+V M +I+SL RPDVLP +
Sbjct: 99 TIQGIAQAALDGVVPDYATALAMDDEALIERLITLRGVGRWTVEMLLIYSLERPDVLPAD 158
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR+G + L LE+ P QM + W PYR+VA+WYLWR
Sbjct: 159 DFGVREGYRRLKGLEQQPSRKQMIDIGRAWSPYRTVAAWYLWR 201
>gi|323526547|ref|YP_004228700.1| HhH-GPD family protein [Burkholderia sp. CCGE1001]
gi|323383549|gb|ADX55640.1| HhH-GPD family protein [Burkholderia sp. CCGE1001]
Length = 363
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 113/196 (57%), Gaps = 3/196 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P S PF+ L RS++ QQ++ + +++T+ A
Sbjct: 165 DKACADLVKRDRILKKLIPKFGPVHLLSRGDPFVTLARSVVGQQISVASAQAVWTKVAAA 224
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C +VP+ + L ++L G+S RKA Y+ DLA+ + +G L +M+D+++
Sbjct: 225 C---PKLVPQQFIKLGQEKLTACGLSKRKAEYVLDLAQHFVSGALHVGKWQSMEDEAVIA 281
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GIG W+ MF+IF+L RPDVLP++DLG+ + + + Y E S+ ++ W
Sbjct: 282 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 341
Query: 309 RPYRSVASWYLWRFVE 324
P+R+VA+WY+WR ++
Sbjct: 342 EPWRTVATWYMWRSLD 357
>gi|430760426|ref|YP_007216283.1| HhH-GPD base excision DNA repair family protein; Probable
3-methyladenine DNA glycosylase/8-oxoguanine DNA
glycosylase [Thioalkalivibrio nitratireducens DSM 14787]
gi|430010050|gb|AGA32802.1| HhH-GPD base excision DNA repair family protein; Probable
3-methyladenine DNA glycosylase/8-oxoguanine DNA
glycosylase [Thioalkalivibrio nitratireducens DSM 14787]
Length = 206
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 110/191 (57%), Gaps = 3/191 (1%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A L D +A+LI +P + PF L R+I+ QQ++ KA S++ RF A
Sbjct: 10 ACADLAGTDPVMAALIARYPDAVLTTRGDPFQTLARAIVGQQISVKAADSVWQRFAAFV- 68
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
V PE ++AL + L G+S RKA YL DLA + +G + + +M D+++ L
Sbjct: 69 --VSVRPEQIVALELESLAACGLSRRKAEYLRDLAGHFVDGRIQPARWQDMTDEAVIAEL 126
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRP 310
V GIG W+ MF+IF+L RPDV P++D+G++K V L Y E P P + + E+ P
Sbjct: 127 VDVRGIGRWTAEMFLIFNLLRPDVWPVDDIGLQKAVALHYLDNERPTPRTLRRHGERHAP 186
Query: 311 YRSVASWYLWR 321
+R+VA+WYLWR
Sbjct: 187 WRTVATWYLWR 197
>gi|398924045|ref|ZP_10661017.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM48]
gi|398174002|gb|EJM61812.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM48]
Length = 205
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 100/163 (61%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ +L R+I YQQL KAG +I R +AL G + PE ++A QLR G S K +
Sbjct: 39 PYESLVRAIAYQQLHAKAGDAIVGRLLALFGSGSFPRPEQIVATDFDQLRSCGFSASKIT 98
Query: 220 YLHDLARKYQNGILSD-SAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ +G++ D + + MDD++L L + G+G W+V M +I+SL RPD+LP +
Sbjct: 99 TIQGIAQASLDGVVPDYTTALAMDDEALIERLITLRGVGRWTVEMLLIYSLERPDILPAD 158
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR+G + L L+ P QM ++ W PYR+VASWYLWR
Sbjct: 159 DFGVREGYRRLKGLQVQPTRKQMIEIGSAWSPYRTVASWYLWR 201
>gi|377821177|ref|YP_004977548.1| HhH-GPD family protein [Burkholderia sp. YI23]
gi|357936012|gb|AET89571.1| HhH-GPD family protein [Burkholderia sp. YI23]
Length = 344
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 108/196 (55%), Gaps = 13/196 (6%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFH-----TPFLALTRSILYQQLAFKAGTSIYTRF 185
A L DR L LI P F H PF L RS+ QQ++ KA +I+ R
Sbjct: 148 ACADLMKRDRILKKLI-----PKFGEIHLVNLGDPFSTLARSVAGQQISTKAAQAIWERV 202
Query: 186 IALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKS 245
C V P + L +L+ G+S RKA Y+ DLA+ +++G L A +MDD++
Sbjct: 203 KTAC---PEVHPAHFIKLGHDKLQACGLSRRKAEYILDLAQHFESGALHVDAWTSMDDEA 259
Query: 246 LFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLC 305
+ LT + GIG W+ MF+IF+L RPDVLP++DLG+ + + + Y E S+ ++
Sbjct: 260 VIAELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIQAISVNYFSGEPVTRSEAREVA 319
Query: 306 EKWRPYRSVASWYLWR 321
W P+R+VA+WY+WR
Sbjct: 320 ANWEPWRTVATWYMWR 335
>gi|448299292|ref|ZP_21489304.1| HhH-GPD family protein [Natronorubrum tibetense GA33]
gi|445587882|gb|ELY42131.1| HhH-GPD family protein [Natronorubrum tibetense GA33]
Length = 197
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 107/184 (58%), Gaps = 12/184 (6%)
Query: 142 LASLIDIHPP---PTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPE 198
+A L++ H P P + F L SI+ QQL+ + T++ RF L G V PE
Sbjct: 15 MAELVERHDPYVEPNWSEFER----LCISIINQQLSTASATAVRERFFELLDGR--VTPE 68
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
TVLA LR G+S +K Y+ + AR +Q G + + + + + +LT + GIG
Sbjct: 69 TVLAAEDDALRSAGLSRQKIEYVRNAARAFQEGDYTREGLADHSNDDVIDLLTEIKGIGD 128
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLY--SLEELPRPSQMDQLCEKWRPYRSVAS 316
W+ M+++F L RPDVLP+ DL VR+G++ LY EEL RP +M ++ E WRPYRSVA+
Sbjct: 129 WTARMYLLFVLERPDVLPLGDLAVRRGIEQLYGNGDEELTRP-EMREIAEAWRPYRSVAT 187
Query: 317 WYLW 320
++W
Sbjct: 188 RFIW 191
>gi|170694949|ref|ZP_02886098.1| HhH-GPD family protein [Burkholderia graminis C4D1M]
gi|170140047|gb|EDT08226.1| HhH-GPD family protein [Burkholderia graminis C4D1M]
Length = 370
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 112/196 (57%), Gaps = 3/196 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P S PF+ L RS++ QQ++ + +++ + A
Sbjct: 172 DKACADLVKRDRILKKLIPKFGPVHLLSRGDPFVTLARSVVGQQISVASAQAVWAKVAAA 231
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C +VP+ + L ++L G+S RKA Y+ DLA+ + +G L +M+D+++
Sbjct: 232 C---PKLVPQQFIKLGQEKLTACGLSRRKAEYVLDLAQHFVSGALHVGKWRSMEDEAVIA 288
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GIG W+ MF+IF+L RPDVLP++DLG+ + + + Y E S+ ++ W
Sbjct: 289 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 348
Query: 309 RPYRSVASWYLWRFVE 324
P+R+VA+WY+WR ++
Sbjct: 349 EPWRTVATWYMWRSLD 364
>gi|374312617|ref|YP_005059047.1| HhH-GPD family protein [Granulicella mallensis MP5ACTX8]
gi|358754627|gb|AEU38017.1| HhH-GPD family protein [Granulicella mallensis MP5ACTX8]
Length = 224
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 116/204 (56%), Gaps = 4/204 (1%)
Query: 122 LSSE-GEVEAAIRHLRNADRQLASLIDIHPPPTF--DSFHTPFLALTRSILYQQLAFKAG 178
LS+E G AA RHL + D L+ P T P+ AL R+I YQQL KAG
Sbjct: 12 LSTESGPFHAATRHLASIDIDWRRLVKQVGPCTHLPKPAREPYEALIRAIAYQQLHAKAG 71
Query: 179 TSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGIL-SDSA 237
+I T+F+AL G P+ +LA LR G SGRK + ++A +G++ ++
Sbjct: 72 DAILTKFMALFGEPKFPSPDRILAADFDSLRACGFSGRKIETIREIASGSLSGLVPGRTS 131
Query: 238 IVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPR 297
M D+ L + L + GIG W+V MF+I++L R DVLP +D GVR+G + L SL +
Sbjct: 132 ADKMSDEDLISRLVTLKGIGRWTVEMFLIYTLERMDVLPADDFGVREGHRRLKSLPKAFS 191
Query: 298 PSQMDQLCEKWRPYRSVASWYLWR 321
++ + ++W PYR++A+WYLWR
Sbjct: 192 AKEIAREGQRWSPYRTIAAWYLWR 215
>gi|307729280|ref|YP_003906504.1| HhH-GPD family protein [Burkholderia sp. CCGE1003]
gi|307583815|gb|ADN57213.1| HhH-GPD family protein [Burkholderia sp. CCGE1003]
Length = 368
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 112/196 (57%), Gaps = 3/196 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P S PF+ L RS++ QQ++ + +++ + A
Sbjct: 170 DKACADLVKRDRILKKLIPKFGPVHLLSRGDPFVTLARSVVGQQISVASAQAVWAKVAAA 229
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C +VP+ + L ++L G+S RKA Y+ DLA+ + +G L +M+D+++
Sbjct: 230 C---PKLVPQQFIKLGQEKLTACGLSKRKAEYVLDLAQHFVSGALHVGKWRSMEDEAVIA 286
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GIG W+ MF+IF+L RPDVLP++DLG+ + + + Y E S+ ++ W
Sbjct: 287 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 346
Query: 309 RPYRSVASWYLWRFVE 324
P+R+VA+WY+WR ++
Sbjct: 347 EPWRTVATWYMWRSLD 362
>gi|350545605|ref|ZP_08915077.1| HhH-GPD base excision DNA repair familyprotein, Probable
3-methyladenine DNAglycosylase/8-oxoguanine DNA
glycosylase [Candidatus Burkholderia kirkii UZHbot1]
gi|350526662|emb|CCD39994.1| HhH-GPD base excision DNA repair familyprotein, Probable
3-methyladenine DNAglycosylase/8-oxoguanine DNA
glycosylase [Candidatus Burkholderia kirkii UZHbot1]
Length = 350
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 108/196 (55%), Gaps = 13/196 (6%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFH-----TPFLALTRSILYQQLAFKAGTSIYTRF 185
A L DR L LI P F H PF L RS+ QQ++ KA +I+ R
Sbjct: 154 ACADLMKRDRILKKLI-----PKFSEIHLVNLGDPFSTLARSVAGQQISTKAAQAIWERV 208
Query: 186 IALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKS 245
C + P + L ++L+ G+S RKA Y+ DLA+ ++NG L A + DD++
Sbjct: 209 KGAC---PEIHPAQFIRLGHEKLQACGLSRRKAEYILDLAQHFENGALHVDAWTSRDDEA 265
Query: 246 LFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLC 305
+ LT + GIG W+ MF+IF+L RPDVLP++DLG+ + + + Y E S+ ++
Sbjct: 266 VIAELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIQAISVNYFSGEPVTRSEAREVA 325
Query: 306 EKWRPYRSVASWYLWR 321
W P+R+VA+WY+WR
Sbjct: 326 ANWEPWRTVATWYMWR 341
>gi|433678687|ref|ZP_20510518.1| DNA-3-methyladenine glycosylase II [Xanthomonas translucens pv.
translucens DSM 18974]
gi|430816201|emb|CCP41024.1| DNA-3-methyladenine glycosylase II [Xanthomonas translucens pv.
translucens DSM 18974]
Length = 224
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 115/203 (56%), Gaps = 6/203 (2%)
Query: 127 EVEAAIRHLRNADRQLASLID----IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIY 182
+ +AA HL DR+L + + I P P + P AL R+IL+QQL+ KA +I
Sbjct: 9 DTQAAYDHLSRRDRKLGAWMRRIGPIAPQPGWARPFDPVDALARAILFQQLSGKAAATIV 68
Query: 183 TRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNG-ILSDSAIVNM 241
R A G + +T+ + LR GVS KA L DLAR+ G I S + M
Sbjct: 69 GRVEAAIG-SIRLHADTLARIDDPGLRACGVSANKALALRDLARREAAGEIPSLRKLAFM 127
Query: 242 DDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQM 301
DD+++ L V GIG W+V M ++F L RP +LP++DLGVRKG Q + L+++P P +
Sbjct: 128 DDEAIVQALLPVRGIGRWTVEMMLLFRLGRPALLPVDDLGVRKGAQRVGQLQQMPAPQSL 187
Query: 302 DQLCEKWRPYRSVASWYLWRFVE 324
+ E+W PYRS AS+YLW+ +
Sbjct: 188 AEHGERWGPYRSYASFYLWKIAD 210
>gi|322433724|ref|YP_004215936.1| HhH-GPD family protein [Granulicella tundricola MP5ACTX9]
gi|321161451|gb|ADW67156.1| HhH-GPD family protein [Granulicella tundricola MP5ACTX9]
Length = 239
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 125/232 (53%), Gaps = 21/232 (9%)
Query: 114 VPRIIARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFD--SFHTPFLALTRSILYQ 171
+PRI+ARP + A+R L AD +L L++ P T S +PF AL SI+YQ
Sbjct: 1 MPRILARPRPPTYDSARAVRELTAADPKLGRLMERAGPYTLKLASTQSPFEALLVSIIYQ 60
Query: 172 QLAFKAGTSIYTRFIALCGG----EAGVV-----PETVLALTPQQLRQIGVSGRKASYLH 222
QL KA +I+TR + G E ++ P+ +L +QLR G+S KA +
Sbjct: 61 QLHGKAAAAIHTRLLESFGHVLTLEGKMLGDHPSPQHLLDCPNEQLRAAGLSHNKALSVR 120
Query: 223 DLARKYQNGIL-SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLG 281
DLA K G + S + I M D+ + LT V GIG W+V MF++F L RPDVLP+ D G
Sbjct: 121 DLAAKTIEGTVPSMARIRRMTDEDVIEHLTQVRGIGRWTVEMFLMFRLGRPDVLPLGDYG 180
Query: 282 VRKGVQLLY---------SLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
VRKG L + + + L P M + ++W P+ S+ASWY+WR +
Sbjct: 181 VRKGFALTFQGLKPTQKVTPDLLATPEAMLKRAKRWHPWCSIASWYMWRACD 232
>gi|398902915|ref|ZP_10651346.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM50]
gi|398177816|gb|EJM65481.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM50]
Length = 205
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 100/163 (61%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ +L R+I YQQL KAG +I R +AL PE +LA +Q+R G S K +
Sbjct: 39 PYESLVRAIAYQQLHAKAGDAIVGRLLALFPSITFPRPEQILATDFEQMRGCGFSASKIA 98
Query: 220 YLHDLARKYQNGILSDSAI-VNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ +G++ D A + MDD++L L + G+G W+V M +I+SL RPD+LP +
Sbjct: 99 TIQGIAQAALDGVVPDYATALAMDDEALIERLITLRGVGRWTVEMLLIYSLERPDILPAD 158
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR+G + L LE P QM ++ WRPYR+VA+WYLWR
Sbjct: 159 DFGVREGYRRLKGLEVQPTRKQMIEIGLAWRPYRTVAAWYLWR 201
>gi|381209691|ref|ZP_09916762.1| DNA-3-methyladenine glycosidase [Lentibacillus sp. Grbi]
Length = 217
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 118/193 (61%), Gaps = 2/193 (1%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A+ L+ AD+Q+ LIDI T F +L RSI+ QQ++ +A ++I+ R AL
Sbjct: 12 AVNQLKAADQQMNKLIDIVGDVTVSMRPDYFKSLVRSIIGQQISVQAASTIFGRLEALL- 70
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
E + PE +L ++ +QLR IG+S +K +YL DL K + + + + +MD++S+ +L
Sbjct: 71 -EGLIEPEAILKVSDEQLRTIGLSRQKVNYLRDLTAKVHDKTIDFAQMDDMDNRSVIKLL 129
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRP 310
T + GIG W+ MF+IFSL R +VL ++D+G+++G + LY +++ R + W P
Sbjct: 130 TSIKGIGKWTAEMFLIFSLGRMNVLAVDDIGIQRGAKWLYEVDKSERRRILLDKKPVWDP 189
Query: 311 YRSVASWYLWRFV 323
+ ++AS+YLW V
Sbjct: 190 HLTIASFYLWEVV 202
>gi|389796690|ref|ZP_10199741.1| dna-3-methyladenine glycosylase protein [Rhodanobacter sp. 116-2]
gi|388448215|gb|EIM04200.1| dna-3-methyladenine glycosylase protein [Rhodanobacter sp. 116-2]
Length = 215
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 100/177 (56%), Gaps = 1/177 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R++ YQQL KAG +I R +AL A P + +R G S RK
Sbjct: 38 PYEALVRAVAYQQLHVKAGDAILARLLALHPRRAFPSPAQLRDAGFDSMRACGFSARKIE 97
Query: 220 YLHDLARKYQNGILSD-SAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A G++ D SA + + D+ L L+++ GIG W+V MF+I+SL RPD+LP N
Sbjct: 98 TIRGIAAATLEGVVPDLSAALALPDEELIARLSVLKGIGRWTVEMFLIYSLDRPDILPAN 157
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAKGAPSSAAAV 335
D GVR+G +LL SLE P P + + W PYR+ A+WYLWR A + AAV
Sbjct: 158 DFGVREGYRLLKSLETAPTPKALAAIGAAWSPYRTAAAWYLWRVPRPSKAKAKQAAV 214
>gi|451936283|ref|YP_007460137.1| DNA-3-methyladenine glycosylase II [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
gi|451777206|gb|AGF48181.1| DNA-3-methyladenine glycosylase II [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
Length = 203
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 113/196 (57%), Gaps = 2/196 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
E A+ L+ DR L +I +H S +PF+ L SI+ QQ++ K + I+ +F+ +
Sbjct: 10 EQAVSDLKKKDRILKRIIPLHSEKKLLSSESPFITLANSIISQQISTKTASIIWGKFVKI 69
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
G P+ ++ ++L IG+ RK YL+DLA + ++ ++MDD+S+ +
Sbjct: 70 FGQSPS--PKDIIHNKREELMSIGLPKRKVDYLYDLAIHFHEKKINPDKWIDMDDESVIS 127
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
L+ + GIG W+ MF+IF+L RPDV+P++D G+ + + L Y E + ++ W
Sbjct: 128 ELSSIKGIGRWTSEMFLIFNLRRPDVMPLDDTGLIRAISLHYFSGEPVSRFEAREVSVAW 187
Query: 309 RPYRSVASWYLWRFVE 324
RP+R+VASWYLW +E
Sbjct: 188 RPWRTVASWYLWCSIE 203
>gi|393758899|ref|ZP_10347718.1| DNA-3-methyladenine glycosylase II [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
gi|393162795|gb|EJC62850.1| DNA-3-methyladenine glycosylase II [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
Length = 416
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/178 (41%), Positives = 104/178 (58%), Gaps = 7/178 (3%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL RS++YQQL +A I R + L PE VLA + LR G+SG KA+
Sbjct: 48 PYEALIRSVVYQQLHTRAVERILQRLLDLYPHGHCPDPEEVLATPYETLRACGLSGAKAT 107
Query: 220 YLHDLARKYQNGILSDSA-IVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ LA+ +G++ D A + M +K L LT + GIG W+V M M+++L R D+LP +
Sbjct: 108 SIMGLAQARLDGLIPDQARAMQMSEKELIERLTTLRGIGRWTVEMMMMYTLEREDILPAD 167
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAKGAPSSAAAVA 336
D GVR+G + L L++ P P + ++ + W PYRSVASWYLWR P AAA A
Sbjct: 168 DFGVREGYRNLKRLDKAPSPRALREIAQAWAPYRSVASWYLWRM------PKRAAATA 219
>gi|187928102|ref|YP_001898589.1| HhH-GPD family protein [Ralstonia pickettii 12J]
gi|187724992|gb|ACD26157.1| HhH-GPD family protein [Ralstonia pickettii 12J]
Length = 290
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 110/192 (57%), Gaps = 5/192 (2%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A L DR L +I P S PF+ L RSI+ QQ++ KA S++ R + +C
Sbjct: 95 ACADLMKRDRILRKIIPTCGPAHLASRGDPFVTLARSIVGQQISVKAAQSVWERVVGVC- 153
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
+VP L ++L G+S RKA Y+ DLA ++NG + + M+D+ + L
Sbjct: 154 --PKLVPAQFLRAGQEKLAGCGLSKRKAEYILDLADHFRNGTVHVAKWAEMEDEDVIAEL 211
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV-QLLYSLEELPRPSQMDQLCEKWR 309
T + GIG W+ MF++F+L RP+VLP++D+G+ + Q +S E + R S+ ++ W
Sbjct: 212 TQIRGIGRWTAEMFLMFNLMRPNVLPLDDIGLINAISQNYFSGEPVTR-SEAREVAANWE 270
Query: 310 PYRSVASWYLWR 321
P+R+VA+WY+WR
Sbjct: 271 PWRTVATWYMWR 282
>gi|398954915|ref|ZP_10676186.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM33]
gi|398151863|gb|EJM40399.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM33]
Length = 205
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 100/163 (61%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ +L R+I YQQL KAG +I R +AL G A PE ++A +LR G S K +
Sbjct: 39 PYESLVRAIAYQQLHAKAGDAIVGRLLALFGSGAFPRPEQIVATDFDRLRSCGFSASKIA 98
Query: 220 YLHDLARKYQNGILSDSAI-VNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ +G++ D A + MDD++L L + G+G W+V M +I+SL RPD+LP +
Sbjct: 99 TIQGIAQASLDGVVPDYATALVMDDEALIERLITLRGVGRWTVEMLLIYSLERPDILPAD 158
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR+G + L L+ P QM ++ W PYR+VA+WYLWR
Sbjct: 159 DFGVREGYRRLKGLQVQPTRKQMIEIGSAWSPYRTVAAWYLWR 201
>gi|448568190|ref|ZP_21637767.1| DNA-3-methyladenine glycosylase [Haloferax lucentense DSM 14919]
gi|445727140|gb|ELZ78754.1| DNA-3-methyladenine glycosylase [Haloferax lucentense DSM 14919]
Length = 193
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 108/195 (55%), Gaps = 7/195 (3%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A R LR AD L ++D H P + D PF L SI+ QQL+ A +I R
Sbjct: 5 AYRELR-ADPHLGDVVDEHGPLSLDPADDPFERLVVSIVNQQLSTTAAATIRDRLF---- 59
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
V PE +LA LR G+S +K Y+ ++A +++G LS ++ MDD + L
Sbjct: 60 DRVEVTPEGILAADEDVLRDCGLSNQKVGYVRNVADAFRDG-LSAESLREMDDGEVVAAL 118
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLE-ELPRPSQMDQLCEKWR 309
T + G+G W+ MF+IF L R DV P+ DLG+R+G++ ++ E + +M + E+W
Sbjct: 119 TEIRGVGDWTAKMFLIFVLAREDVFPVEDLGIRRGMEHVFGFEQDAVSRGEMRERAERWA 178
Query: 310 PYRSVASWYLWRFVE 324
PYRS AS YLWR V+
Sbjct: 179 PYRSYASRYLWRCVD 193
>gi|257093681|ref|YP_003167322.1| HhH-GPD family protein [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
gi|257046205|gb|ACV35393.1| HhH-GPD family protein [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
Length = 205
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 108/187 (57%), Gaps = 3/187 (1%)
Query: 135 LRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAG 194
L +D LA ++ S PF+ L RSI+ QQ++ KA S++ R +A+ A
Sbjct: 13 LAQSDPVLAGFVERFAGTALVSRGDPFVTLLRSIVGQQISVKAADSVWGRLLAVLPVPAA 72
Query: 195 VVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVN 254
+LA P+ LR+ G+S RK Y+ DLAR++ G + S +M D + LT V
Sbjct: 73 T---ALLACEPEALRRCGLSVRKVEYVIDLARRFAGGEIHVSHWASMRDAEIIAELTAVR 129
Query: 255 GIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSV 314
G+G W+ MF+IF+ RPDV P++D+G+++ V + Y E P + + E+WRP+RSV
Sbjct: 130 GVGVWTAEMFLIFNQLRPDVFPLDDIGLQRAVGIHYHGGERPPRRLLAEHGERWRPWRSV 189
Query: 315 ASWYLWR 321
A+WYLWR
Sbjct: 190 ATWYLWR 196
>gi|340386670|ref|XP_003391831.1| PREDICTED: DNA-3-methyladenine glycosylase 1-like [Amphimedon
queenslandica]
Length = 211
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 111/200 (55%), Gaps = 5/200 (2%)
Query: 129 EAAIRHLRNADRQLASLID-IHP--PPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRF 185
+ AI LR D L +ID I P P +PF AL RSI+YQQL+ KA +I+TR
Sbjct: 7 DLAITELRGCDPDLGRIIDAIEPRRPQKRGEMRSPFDALLRSIVYQQLSGKAAKTIHTRL 66
Query: 186 IALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKY-QNGILSDSAIVNMDDK 244
+AL G ++LA+ + LR G+S K + DLA K + S + M
Sbjct: 67 LALFPGRRPSA-RSLLAMDDETLRSAGLSRPKIVAVRDLAAKVCAREVPSKEKLQTMTSD 125
Query: 245 SLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQL 304
++ L + GIG W+V M +IF+L R D+LP DLGVR+G L E +P P ++ +
Sbjct: 126 AIIERLVKIRGIGQWTVEMLLIFNLDRADILPATDLGVRRGFMLCRKNESMPEPQELLEE 185
Query: 305 CEKWRPYRSVASWYLWRFVE 324
E+ RP+RSVA+WYLWR E
Sbjct: 186 GERRRPWRSVAAWYLWRACE 205
>gi|423013778|ref|ZP_17004499.1| DNA-3-methyladenine glycosylase II [Achromobacter xylosoxidans
AXX-A]
gi|338783272|gb|EGP47640.1| DNA-3-methyladenine glycosylase II [Achromobacter xylosoxidans
AXX-A]
Length = 234
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 112/198 (56%), Gaps = 5/198 (2%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDS--FHTPFLALTRSILYQQLAFKAGTSIYTRFI 186
E A RHL D A + P S P+ AL R+I YQQL +AG +I R +
Sbjct: 30 ERAARHLAALDADWARHVQAIGPCLHASRPAREPYEALVRAIAYQQLHARAGDAILGRLL 89
Query: 187 ALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGIL--SDSAIVNMDDK 244
AL G+A P T+L P+ R G S K + + +A+ +G++ D A+ M D+
Sbjct: 90 ALYPGQAFPRPRTLLDTDPEAQRACGFSATKLATIRGIAQAALDGVIPERDEALA-MSDE 148
Query: 245 SLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQL 304
+L L + G+G W+V M +I++L R D+LP++D GVR+G + L L++ P P+QM +
Sbjct: 149 ALIERLVALRGVGRWTVEMLLIYTLERMDILPVDDYGVREGYRRLKRLDKAPSPAQMRAI 208
Query: 305 CEKWRPYRSVASWYLWRF 322
E + PYR++A+WYLWR
Sbjct: 209 GEAFSPYRTIAAWYLWRM 226
>gi|395447125|ref|YP_006387378.1| DNA-3-methyladenine glycosylase II [Pseudomonas putida ND6]
gi|421524643|ref|ZP_15971264.1| DNA-3-methyladenine glycosylase II [Pseudomonas putida LS46]
gi|388561122|gb|AFK70263.1| DNA-3-methyladenine glycosylase II [Pseudomonas putida ND6]
gi|402751106|gb|EJX11619.1| DNA-3-methyladenine glycosylase II [Pseudomonas putida LS46]
Length = 208
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 99/163 (60%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R+I YQQL +A +I R +AL + PE +LA+TP+ LR G S K
Sbjct: 45 PYEALVRAIAYQQLHARAAEAILGRLLALFPADDFPQPEQLLAVTPETLRACGFSASKLV 104
Query: 220 YLHDLARKYQNGIL-SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ G++ + + M D++L L + G+G W+V M +I+SL R D+LP++
Sbjct: 105 TVQGIAQATLEGLVPTREQALTMADEALIERLVALRGVGRWTVEMLLIYSLGRSDILPVD 164
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR+G + L LE P P+QM L WRP+R+VA+WYLWR
Sbjct: 165 DFGVREGYRRLKGLETAPTPAQMRSLGGAWRPFRTVAAWYLWR 207
>gi|431800748|ref|YP_007227651.1| DNA-3-methyladenine glycosylase II [Pseudomonas putida HB3267]
gi|430791513|gb|AGA71708.1| DNA-3-methyladenine glycosylase II [Pseudomonas putida HB3267]
Length = 208
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 100/163 (61%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ L R+I YQQL +A +I R +AL + PE +LA+ PQ +R G S K +
Sbjct: 45 PYEVLVRAIAYQQLHARAAEAILGRLLALFPEASFPGPEQLLAVAPQTMRACGFSASKMA 104
Query: 220 YLHDLARKYQNGIL-SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ +G++ S + M D++L L + G+G W+V M +I+SL R DVLP++
Sbjct: 105 TIQGIAQGRLDGLVPSREEALAMADEALIERLVALRGVGRWTVEMLLIYSLARSDVLPVD 164
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR+G + L L++ P P+QM L WRPYR+VA+WYLWR
Sbjct: 165 DFGVREGYRRLKGLDKAPTPAQMRSLGGGWRPYRTVAAWYLWR 207
>gi|187924486|ref|YP_001896128.1| HhH-GPD family protein [Burkholderia phytofirmans PsJN]
gi|187715680|gb|ACD16904.1| HhH-GPD family protein [Burkholderia phytofirmans PsJN]
Length = 349
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 112/196 (57%), Gaps = 3/196 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P S PF+ L RS++ QQ++ + +++ + A
Sbjct: 151 DKACADLVKRDRILKKLIPKFGPVHLLSRGDPFVTLARSVVGQQISVASAQAVWAKVEAA 210
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C +VP+ + L ++L G+S RKA Y+ DLA+ + +G L +M+D+++
Sbjct: 211 C---PKLVPQQFIKLGLEKLTTCGLSKRKAEYVLDLAQHFVSGALHVGKWTSMEDEAVIA 267
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GIG W+ MF+IF+L RPDVLP++DLG+ + + + Y E S+ ++ W
Sbjct: 268 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 327
Query: 309 RPYRSVASWYLWRFVE 324
P+R+VA+WY+WR ++
Sbjct: 328 EPWRTVATWYMWRSLD 343
>gi|388569690|ref|ZP_10156079.1| HhH-GPD [Hydrogenophaga sp. PBC]
gi|388263113|gb|EIK88714.1| HhH-GPD [Hydrogenophaga sp. PBC]
Length = 212
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 111/192 (57%), Gaps = 5/192 (2%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A +HL DR + LI HP S F+ L RSI+ QQ++ KA S++ RF +L
Sbjct: 16 ACKHLMKRDRVMKKLIPRHPDVCLQSRGDAFVTLARSIVGQQISVKAAQSVWDRFESL-- 73
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
+ P VL L +R G+S RK YL DLA + + + S MDD+++ T L
Sbjct: 74 -TRKMTPAQVLKLKVDDMRASGLSARKVEYLVDLALHFADKRVRVSDWPEMDDEAIITEL 132
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV-QLLYSLEELPRPSQMDQLCEKWR 309
+ GIG W+ MF+IF L RP+VLP++D+G++ G+ Q +S E + R S++ ++ W
Sbjct: 133 VAIRGIGRWTAEMFLIFHLMRPNVLPLDDIGLQTGISQAYFSGEPVSR-SEIREVAGSWA 191
Query: 310 PYRSVASWYLWR 321
P+ SVA+WY+WR
Sbjct: 192 PFCSVATWYIWR 203
>gi|424922741|ref|ZP_18346102.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Pseudomonas fluorescens R124]
gi|404303901|gb|EJZ57863.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Pseudomonas fluorescens R124]
Length = 205
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 105/179 (58%), Gaps = 7/179 (3%)
Query: 150 PPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLR 209
P PT D P+ +L R+I YQQL KAG +I R +AL G+ PE +LA QLR
Sbjct: 33 PHPTRD----PYESLVRAIAYQQLHAKAGDAIVGRLVALFPGQTFPRPEQILATDFDQLR 88
Query: 210 QIGVSGRKASYLHDLARKYQNGILSDS-AIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFS 268
G S K + + +A+ +G++ D + MDD++L L + G+G W+V M +I+S
Sbjct: 89 GCGFSAGKIATIQGIAQATLDGVVPDYPTALAMDDEALIERLVNLRGVGRWTVEMLLIYS 148
Query: 269 LHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAKG 327
L R D+LP +D GVR+G + L LE P QM ++ W PYR+VA+WYLWR AKG
Sbjct: 149 LERMDILPADDFGVREGYRRLKGLEVQPTRKQMIEIGSAWSPYRTVAAWYLWRV--AKG 205
>gi|320108054|ref|YP_004183644.1| HhH-GPD family protein [Terriglobus saanensis SP1PR4]
gi|319926575|gb|ADV83650.1| HhH-GPD family protein [Terriglobus saanensis SP1PR4]
Length = 224
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 99/163 (60%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R+I YQQL KAG +I T+F AL GG P +LA LR G SGRK
Sbjct: 53 PYEALIRAIAYQQLHAKAGDAILTKFTALFGGSNFPSPNQILAADFDSLRACGFSGRKIE 112
Query: 220 YLHDLARKYQNGILSDSAIVN-MDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ ++A +G++ D + M D+ L + L + GIG W+V MF+I++L R DVLP +
Sbjct: 113 TIREIASGSLSGLVPDRKDADKMSDEDLISRLVALKGIGRWTVEMFLIYTLERMDVLPAD 172
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR+G + L SL + ++ + ++W PYR++A+WYLWR
Sbjct: 173 DFGVREGHRRLKSLPKALSAKEITREGQRWSPYRTIAAWYLWR 215
>gi|171058354|ref|YP_001790703.1| HhH-GPD family protein [Leptothrix cholodnii SP-6]
gi|170775799|gb|ACB33938.1| HhH-GPD family protein [Leptothrix cholodnii SP-6]
Length = 216
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 114/201 (56%), Gaps = 1/201 (0%)
Query: 122 LSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSI 181
L + G + A RHL DR + +LI S F L RSI+ QQ++ K+ ++
Sbjct: 7 LVAPGYWDDACRHLVKRDRVMKNLIPRFGEARLQSRGDAFTTLARSIVGQQISVKSAQAV 66
Query: 182 YTRFIAL-CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVN 240
+ RFIAL A + P+ + L +R G+S RK YL DLA + + ++ ++
Sbjct: 67 WGRFIALSVDPTAPLTPDWLQGLAIDSMRAAGLSARKVDYLRDLANHFLERSVHETDWLS 126
Query: 241 MDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQ 300
MDD+++ L + GIG W+ MF+IF L RP+VLP++D+G+ KG+ L Y E ++
Sbjct: 127 MDDEAIIEELVAIRGIGRWTAEMFLIFHLMRPNVLPLDDVGLIKGISLNYFSGEPVSRAE 186
Query: 301 MDQLCEKWRPYRSVASWYLWR 321
++ + W P+RSVA+WY+WR
Sbjct: 187 AREVGDAWAPFRSVATWYIWR 207
>gi|94312696|ref|YP_585905.1| DNA-3-methyladenine glycosylase [Cupriavidus metallidurans CH34]
gi|93356548|gb|ABF10636.1| DNA-3-methyladenine glycosylase [Cupriavidus metallidurans CH34]
Length = 218
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 98/164 (59%), Gaps = 1/164 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R+I YQQL +AG +I R +AL G + PE +LA P+ R G S K +
Sbjct: 52 PYEALVRAIAYQQLHARAGDAILGRLLALYPGVSFPAPEQLLASDPELQRACGFSAEKLA 111
Query: 220 YLHDLARKYQNGILSD-SAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ G++ + + D +L LT + G+G W+V MF+I+SL R DVLP++
Sbjct: 112 TIRRIAQATVEGLVPNLEEARRLPDTALIERLTSLRGVGRWTVEMFLIYSLERSDVLPVD 171
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRF 322
D GVR+G L LE P P QM ++ E W P+R+VA+WYLWR
Sbjct: 172 DFGVREGYGRLKGLERAPTPRQMREIGEAWSPFRTVAAWYLWRL 215
>gi|398872674|ref|ZP_10627959.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM74]
gi|398202049|gb|EJM88906.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM74]
Length = 205
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 100/163 (61%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ +L R+I YQQL KAG +I R +AL G + PE ++A +LR G S K +
Sbjct: 39 PYESLVRAIAYQQLHAKAGDAIVGRLLALFGSGSFPRPEQIVATDFDRLRSCGFSANKIT 98
Query: 220 YLHDLARKYQNGILSDSAI-VNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ +G++ D A + MDD++L L + G+G W+V M +I+SL RPD+LP +
Sbjct: 99 TIQGIAQASLDGVVPDYATALAMDDQALIERLITLRGVGRWTVEMLLIYSLERPDILPAD 158
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR+G + L L+ P QM ++ W PYR+VASWYLWR
Sbjct: 159 DFGVREGYRRLKGLQVQPTRKQMIEIGLAWSPYRTVASWYLWR 201
>gi|426409808|ref|YP_007029907.1| DNA-3-methyladenine glycosylase II [Pseudomonas sp. UW4]
gi|426268025|gb|AFY20102.1| DNA-3-methyladenine glycosylase II [Pseudomonas sp. UW4]
Length = 205
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 100/163 (61%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ +L R+I YQQL KAG +I R +AL G + PE ++A +LR G S K +
Sbjct: 39 PYESLVRAIAYQQLHAKAGDAIVGRLLALFGSGSFPRPEQIVATDFDRLRSCGFSASKIA 98
Query: 220 YLHDLARKYQNGILSDSAI-VNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ +G++ D A + MDD++L L + G+G W+V M +I+SL RPD+LP +
Sbjct: 99 TIQGIAQASLDGVVPDYATALAMDDEALIERLITLRGVGRWTVEMLLIYSLERPDILPAD 158
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR+G + L LE P QM ++ W PYR+VA+WYLWR
Sbjct: 159 DFGVREGYRRLKGLEVQPTRKQMIEIGLAWSPYRTVAAWYLWR 201
>gi|389808165|ref|ZP_10204575.1| DNA-3-methyladenine glycosylase II [Rhodanobacter thiooxydans LCS2]
gi|388443043|gb|EIL99202.1| DNA-3-methyladenine glycosylase II [Rhodanobacter thiooxydans LCS2]
Length = 210
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 99/163 (60%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R++ YQQL KAG +I R +AL +A P +L LR+ G S RK
Sbjct: 36 PYEALVRAVAYQQLHVKAGDAILARLLALHLQQAFPSPAQLLDADVDSLRRCGFSARKIE 95
Query: 220 YLHDLARKYQNGILSDSAI-VNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A +GI+ D A + + D+ L L ++ GIG W+V MF+I+SL RPD+LP++
Sbjct: 96 TIRGIAAATVDGIVPDLATALALPDEELVARLCVLKGIGRWTVEMFLIYSLDRPDILPVD 155
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR+G +LL SL+ P P + + +W P+R+ A+WYLWR
Sbjct: 156 DFGVREGYRLLKSLDTAPAPKALAAIGAEWSPHRTAAAWYLWR 198
>gi|237745446|ref|ZP_04575926.1| DNA-3-methyladenine glycosylase II [Oxalobacter formigenes HOxBLS]
gi|229376797|gb|EEO26888.1| DNA-3-methyladenine glycosylase II [Oxalobacter formigenes HOxBLS]
Length = 214
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 108/203 (53%), Gaps = 3/203 (1%)
Query: 119 ARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAG 178
A L G E A R L D L SL+ PF L RSI+ QQ++ KA
Sbjct: 6 ALSLDEPGIWECACRELAQRDPVLKSLMLEPDRGRLTRRGEPFQTLVRSIVGQQISVKAA 65
Query: 179 TSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAI 238
SI+ RF +C G PE + L+ G+S RK YL DLA + +
Sbjct: 66 DSIWQRFREVC---PGCTPEEIAGAESGSLKASGLSKRKTEYLKDLAFHFLERKIQPDRW 122
Query: 239 VNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRP 298
NM D+ + LT + GIG W+ MF+IF+L RPD+LP++D+G++KGV + Y E
Sbjct: 123 GNMTDEEVIADLTRIRGIGRWTAEMFLIFNLLRPDILPLDDVGLQKGVSMAYFSGEPVSG 182
Query: 299 SQMDQLCEKWRPYRSVASWYLWR 321
+ + ++ + W+P+R+VA+WYLWR
Sbjct: 183 NDIRKIAKNWKPWRTVATWYLWR 205
>gi|74318454|ref|YP_316194.1| 3-methyl-adenine DNA glycosylase [Thiobacillus denitrificans ATCC
25259]
gi|74057949|gb|AAZ98389.1| 3-methyladenine DNA glycosylase II [Thiobacillus denitrificans ATCC
25259]
Length = 208
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 106/193 (54%), Gaps = 3/193 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
AA L AD +A LI +P + PF L R+I+ QQ++ KA SI+ RF AL
Sbjct: 10 HAACSELTAADPVMAGLIARYPDCVLGNRGDPFQTLARAIVGQQISVKAADSIWARFAAL 69
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
V P ++AL L G+S RK YL DLA + +G + S MDD+ +
Sbjct: 70 M---EAVAPARLVALDRDTLATCGLSRRKVEYLVDLAGHFIDGRVEPSRWKRMDDEDVIA 126
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
L V GIG W+ MF+IF+L RPDV P++D+G++K V L Y P P + E+
Sbjct: 127 ELVDVRGIGRWTAEMFLIFNLQRPDVWPVDDIGLQKAVALHYLEGVRPTPKVLRAHGERH 186
Query: 309 RPYRSVASWYLWR 321
P+R+VA+WYLWR
Sbjct: 187 APWRTVATWYLWR 199
>gi|407364586|ref|ZP_11111118.1| DNA-3-methyladenine glycosylase II [Pseudomonas mandelii JR-1]
Length = 205
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 98/164 (59%), Gaps = 1/164 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ +L R+I YQQL KAG +I R +AL PE +LA LR G S K +
Sbjct: 39 PYESLVRAIAYQQLHAKAGDAIIGRLLALFPATTFPRPEQILATGFDPLRSCGFSAGKIA 98
Query: 220 YLHDLARKYQNGILSDSAI-VNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ +G++ D A + MDD++L L + G+G W+V M +I+SL RPD+LP +
Sbjct: 99 TIQGIAQAALDGVVPDYATALAMDDEALIERLITLRGVGRWTVEMLLIYSLERPDILPAD 158
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRF 322
D GVR+G + L LE P QM ++ WRPYR+VASWYLWR
Sbjct: 159 DFGVREGYRRLKGLEVQPTRKQMVEIGLAWRPYRTVASWYLWRM 202
>gi|352082120|ref|ZP_08952943.1| DNA-3-methyladenine glycosylase II [Rhodanobacter sp. 2APBS1]
gi|351682258|gb|EHA65364.1| DNA-3-methyladenine glycosylase II [Rhodanobacter sp. 2APBS1]
Length = 215
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 100/177 (56%), Gaps = 1/177 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R++ YQQL KAG +I R +AL A P + +R G S RK
Sbjct: 38 PYEALVRAVAYQQLHVKAGDAILARLLALHPRRAFPSPAQLRDADFDSMRACGFSARKIE 97
Query: 220 YLHDLARKYQNGILSD-SAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A G++ D SA + + D+ L L+++ GIG W+V MF+I+SL RPD+LP +
Sbjct: 98 TIRGIAAATLKGVVPDLSAALALPDEELIARLSVLKGIGRWTVEMFLIYSLDRPDILPAD 157
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAKGAPSSAAAV 335
D GVR+G +LL SLE P P + + W PYR+ A+WYLWR A + AAV
Sbjct: 158 DFGVREGYRLLKSLETAPTPKALAAIGAAWSPYRTAAAWYLWRVPRPSKAKAKQAAV 214
>gi|187479045|ref|YP_787069.1| DNA-3-methyladenine glycosylase [Bordetella avium 197N]
gi|115423631|emb|CAJ50171.1| DNA-3-methyladenine glycosylase [Bordetella avium 197N]
Length = 214
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 109/196 (55%), Gaps = 2/196 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
E A+ HL DR L +I H S +PF+ L R+I+ QQ++ A ++TR + +
Sbjct: 15 EEAVAHLMRRDRILKKIIPQHSHTWLMSRGSPFVTLARAIVGQQISTTAADGLWTRLLDV 74
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
G P TVL Q LR G+S RKA Y+ DLA + + MDD+++ +
Sbjct: 75 AGKRP--TPATVLRAGVQGLRAAGLSQRKAEYVQDLADHFGQRKVHPERWATMDDEAVIS 132
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
L + GIG W+ MF+IF+L RPDVLP++D G+ K + L Y E + ++ W
Sbjct: 133 ELVAIRGIGRWTAEMFLIFNLQRPDVLPLDDPGLLKAISLHYFSGEPVSRFEAREVSLAW 192
Query: 309 RPYRSVASWYLWRFVE 324
+P+R+VA+WYLWR +E
Sbjct: 193 QPWRTVATWYLWRSLE 208
>gi|77458383|ref|YP_347888.1| DNA-3-methyladenine glycosylase II [Pseudomonas fluorescens Pf0-1]
gi|77382386|gb|ABA73899.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas fluorescens Pf0-1]
Length = 208
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/173 (40%), Positives = 103/173 (59%), Gaps = 5/173 (2%)
Query: 150 PPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLR 209
P PT D P+ +L R+I YQQL KAG +I R + L G+ PE +LA QLR
Sbjct: 33 PHPTRD----PYESLVRAIAYQQLHAKAGDAIVGRLVGLFPGQTFPRPEQILATDFDQLR 88
Query: 210 QIGVSGRKASYLHDLARKYQNGILSDS-AIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFS 268
G S K + + +A+ +G++ D + M+D++L L + G+G W+V M +I+S
Sbjct: 89 GCGFSAGKIATIQGIAQATLDGVVPDYPTALAMEDEALIERLVSLRGVGRWTVEMLLIYS 148
Query: 269 LHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
L RPD+LP +D GVR+G + L LE P QM ++ W+P+R+VA+WYLWR
Sbjct: 149 LERPDILPADDFGVREGYRRLKGLEVQPARKQMIEIGLDWKPFRTVAAWYLWR 201
>gi|17545887|ref|NP_519289.1| hypothetical protein RSc1168 [Ralstonia solanacearum GMI1000]
gi|17428182|emb|CAD14870.1| putative dna glycosylase protein [Ralstonia solanacearum GMI1000]
Length = 291
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 110/192 (57%), Gaps = 5/192 (2%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A L DR L +I P S PF+ L RSI+ QQ++ KA S++ R + C
Sbjct: 96 ACADLMKRDRILRKIIPAFGPAHLASRGDPFVTLARSIVGQQISVKAAQSVWERLVEAC- 154
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
+VP L ++L G+S RKA Y+ DLA ++NG++ + M+D+ + L
Sbjct: 155 --PKLVPAQFLRAGHEKLAGCGLSKRKAEYILDLAEHFRNGMVHVAKWAEMEDEDVIAEL 212
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV-QLLYSLEELPRPSQMDQLCEKWR 309
T + GIG W+ MF++F+L RP+VLP++D+G+ + Q +S E + R S+ ++ W
Sbjct: 213 TQIRGIGRWTAEMFLMFNLLRPNVLPLDDIGLINAISQNYFSGEPVTR-SEAREVAANWE 271
Query: 310 PYRSVASWYLWR 321
P+R+VA+WY+WR
Sbjct: 272 PWRTVATWYMWR 283
>gi|448592444|ref|ZP_21651551.1| DNA-3-methyladenine glycosylase [Haloferax elongans ATCC BAA-1513]
gi|445731449|gb|ELZ83033.1| DNA-3-methyladenine glycosylase [Haloferax elongans ATCC BAA-1513]
Length = 194
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 111/196 (56%), Gaps = 9/196 (4%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A R LR AD L +++ H P + D PF L SI+ QQL+ A +I R
Sbjct: 5 AYRELR-ADTHLGDVVETHGPLSLDPAADPFERLVVSIVNQQLSTTAAATIRDRLF---- 59
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
V P +LA LR G+SG+K Y+ ++A +Q+G+ +DS + MDD+ + L
Sbjct: 60 DRVEVTPAGLLAAEESVLRDCGLSGQKVGYVRNVAEAFQDGLSADS-LRTMDDEEVIDAL 118
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLY--SLEELPRPSQMDQLCEKW 308
T + G+G W+ MF+IF L R DV P+ DLG+R+G++ ++ ++ L R + ++ E W
Sbjct: 119 TEIRGVGVWTAKMFLIFVLAREDVFPVEDLGIRRGMEHVFDVDVDGLSRAAMVEH-AETW 177
Query: 309 RPYRSVASWYLWRFVE 324
PYRS AS YLWR V+
Sbjct: 178 APYRSYASLYLWRVVD 193
>gi|300691853|ref|YP_003752848.1| DNA-3-methyladenine glycosylase II [Ralstonia solanacearum PSI07]
gi|299078913|emb|CBJ51574.1| putative DNA-3-methyladenine glycosylase II [Ralstonia solanacearum
PSI07]
Length = 300
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 109/192 (56%), Gaps = 5/192 (2%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A L DR L +I P S PF+ L RSI+ QQ++ KA S++ R + C
Sbjct: 105 ACADLMKRDRILRKIIPAFGPAHLASRGDPFVTLARSIVGQQISVKAAQSVWERLVEAC- 163
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
+VP L ++L G+S RKA Y+ DLA ++NG + + M+D+ + L
Sbjct: 164 --PKLVPAQFLRAGHEKLAGCGLSKRKAEYILDLAEHFRNGTVHVAKWAEMEDEDVIAEL 221
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV-QLLYSLEELPRPSQMDQLCEKWR 309
T + GIG W+ MF++F+L RP+VLP++D+G+ + Q +S E + R S+ ++ W
Sbjct: 222 TQIRGIGRWTAEMFLMFNLLRPNVLPLDDIGLINAISQNYFSGEPVTR-SEAREVAANWE 280
Query: 310 PYRSVASWYLWR 321
P+R+VA+WY+WR
Sbjct: 281 PWRTVATWYMWR 292
>gi|386333864|ref|YP_006030035.1| DNA-3-methyladenine glycosylase protein [Ralstonia solanacearum
Po82]
gi|334196314|gb|AEG69499.1| DNA-3-methyladenine glycosylase protein [Ralstonia solanacearum
Po82]
Length = 300
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 111/195 (56%), Gaps = 5/195 (2%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A L DR L +I P S PF+ L RSI+ QQ++ KA S++ R + C
Sbjct: 105 ACADLMKRDRILRKIIPAFGPAHLASRGDPFVTLARSIVGQQISVKAAQSVWERLVEAC- 163
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
+VP L ++L G+S RKA Y+ DLA ++NG + + M+D+ + L
Sbjct: 164 --PKLVPAQFLRAGHEKLASCGLSKRKAEYILDLAEHFRNGTVHVAKWAEMEDEDVIAEL 221
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV-QLLYSLEELPRPSQMDQLCEKWR 309
T + GIG W+ MF++F+L RP+VLP++D+G+ + Q +S E + R S+ ++ W
Sbjct: 222 TQIRGIGRWTAEMFLMFNLLRPNVLPLDDIGLINAISQNYFSGEPVTR-SEAREVAANWE 280
Query: 310 PYRSVASWYLWRFVE 324
P+R+VA+WY+WR ++
Sbjct: 281 PWRTVATWYMWRSLD 295
>gi|73540825|ref|YP_295345.1| HhH-GPD [Ralstonia eutropha JMP134]
gi|72118238|gb|AAZ60501.1| HhH-GPD [Ralstonia eutropha JMP134]
Length = 256
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 124/235 (52%), Gaps = 14/235 (5%)
Query: 95 TSAKSTKSRAIQQQQQTLTVPRIIARPLSSEGEVEA--------AIRHLRNADRQLASLI 146
TS+++ K A ++ + +P PL E ++A A L DR L +I
Sbjct: 19 TSSRAAKGSA---KEGKVALPEAEVLPLPVETVIDAVRPAYWDEACADLMKRDRILRKMI 75
Query: 147 DIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQ 206
+ P S PF+ L RS++ QQ++ KA S++ R + C + P L P+
Sbjct: 76 PTYGPAHLVSRGDPFITLARSVVGQQISVKAAQSVWERLVGAC---PKLTPAQFLRAGPE 132
Query: 207 QLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMI 266
+L G+S RKA Y+ DLA ++ G + + MDD+++ LT + GIG W+ MF++
Sbjct: 133 KLAACGLSRRKAEYITDLADHFKAGRVHVNEWAVMDDEAVIAELTQIRGIGRWTAEMFLM 192
Query: 267 FSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
F+L RP+VLP++D+G+ + Y E S+ ++ W P+R+VA+WY+WR
Sbjct: 193 FNLMRPNVLPLDDIGLINAISANYFSGEPVTRSEAREVAANWEPWRTVATWYMWR 247
>gi|374370931|ref|ZP_09628920.1| HhH-GPD [Cupriavidus basilensis OR16]
gi|373097488|gb|EHP38620.1| HhH-GPD [Cupriavidus basilensis OR16]
Length = 312
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 127/248 (51%), Gaps = 15/248 (6%)
Query: 85 SSQPTESSKATSAKSTKSRAIQQQQQTLTVPRIIARPLSSEGEVEA--------AIRHLR 136
S P + A T +RA + +P A PL E V+A A L
Sbjct: 66 SPGPVRKADGKPALKTGARAARAP----VLPEAEALPLPVETVVDAVRPAYWDEACADLM 121
Query: 137 NADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV 196
DR L +I + P S PF+ L RS++ QQ++ KA +++ R +A+C +
Sbjct: 122 KRDRILRKMIPTYGPAHLISRGDPFITLARSVVGQQISVKAAQTVWERLVAVC---PRLT 178
Query: 197 PETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGI 256
P +L L G+S RKA Y+ DLA ++ G + ++ MDD+++ LT + GI
Sbjct: 179 PAQMLKAGHDNLAACGLSRRKAEYIVDLAEHFKAGRVHVNSWTEMDDEAVIAELTQIRGI 238
Query: 257 GSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVAS 316
G W+ MF++F+L RP+VLP++D+G+ + Y E S+ ++ W P+R+VA+
Sbjct: 239 GRWTAEMFLMFNLMRPNVLPLDDVGLINAISANYFSGEPVTRSEAREVAANWEPWRTVAT 298
Query: 317 WYLWRFVE 324
WY+WR ++
Sbjct: 299 WYMWRSLD 306
>gi|399576577|ref|ZP_10770332.1| HhH-GPD family protein [Halogranum salarium B-1]
gi|399238021|gb|EJN58950.1| HhH-GPD family protein [Halogranum salarium B-1]
Length = 183
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 106/183 (57%), Gaps = 11/183 (6%)
Query: 142 LASLIDIHPP---PTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPE 198
+ L++ H P P + F L SI+ QQL+ + ++ R + GE V PE
Sbjct: 1 MKRLVETHDPYVEPDWSEFER----LCISIINQQLSTASAAAVKERVFEVLDGE--VTPE 54
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
TVLA + LR G+S K Y+ + AR +Q + A+ +DD + LT + G+G
Sbjct: 55 TVLAADEESLRDAGLSRMKVDYIQNAARAFQESDFTQDAMAALDDDEVVARLTEIKGVGD 114
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSL-EELPRPSQMDQLCEKWRPYRSVASW 317
W+ M+++F L RPDVLP+ DL VRKG++ LY+ EL R ++M ++ E+WRPYRSVA+
Sbjct: 115 WTARMYLLFVLERPDVLPLGDLAVRKGIEQLYADGGELTR-AEMREIAEEWRPYRSVATR 173
Query: 318 YLW 320
Y+W
Sbjct: 174 YIW 176
>gi|149177903|ref|ZP_01856501.1| probable DNA-3-methyladenine glycosylase [Planctomyces maris DSM
8797]
gi|148843243|gb|EDL57608.1| probable DNA-3-methyladenine glycosylase [Planctomyces maris DSM
8797]
Length = 211
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 110/194 (56%), Gaps = 1/194 (0%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A +HL AD L +I+ P + F L RSI+ QQ++ A +IY R AL G
Sbjct: 11 ASKHLSKADPLLKPVINSIGPCPLKPYRYRFALLLRSIVSQQISTSAARTIYLRLHALTG 70
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
+ E V+ L+ +QLR +G+S +KA+Y+ LA + + + D+ + + L
Sbjct: 71 -KGQPTAEKVMQLSHEQLRSVGLSNQKATYVRHLAEMVMQNKVRLHKMHLLSDEDVTSEL 129
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRP 310
V GIG W+ MF++F L RPD+ P +DLG++ G+Q +Y L+ P ++ ++W+P
Sbjct: 130 IQVKGIGVWTAQMFLMFGLCRPDIFPHDDLGIQNGIQKIYELKTRPDKQTCIEIAQRWQP 189
Query: 311 YRSVASWYLWRFVE 324
YR+VASWY WR +E
Sbjct: 190 YRTVASWYCWRILE 203
>gi|207743490|ref|YP_002259882.1| dna glycosylase protein [Ralstonia solanacearum IPO1609]
gi|421896924|ref|ZP_16327319.1| dna glycosylase protein [Ralstonia solanacearum MolK2]
gi|206588089|emb|CAQ18669.1| dna glycosylase protein [Ralstonia solanacearum MolK2]
gi|206594888|emb|CAQ61815.1| dna glycosylase protein [Ralstonia solanacearum IPO1609]
Length = 300
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 111/195 (56%), Gaps = 5/195 (2%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A L DR L +I P S PF+ L RSI+ QQ++ KA S++ R + C
Sbjct: 105 ACADLMKRDRILRKIIPAFGPAHLASRGDPFVTLARSIVGQQISVKAAQSVWERLVEAC- 163
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
+VP L ++L G+S RKA Y+ DLA ++NG + + M+D+ + L
Sbjct: 164 --PKLVPAQFLRAGHEKLASCGLSKRKAEYILDLAEHFRNGTVHVAKWAEMEDEDVIAEL 221
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV-QLLYSLEELPRPSQMDQLCEKWR 309
T + GIG W+ MF++F+L RP+VLP++D+G+ + Q +S E + R S+ ++ W
Sbjct: 222 TQIRGIGRWTAEMFLMFNLLRPNVLPLDDIGLINAISQNYFSGEPVTR-SEAREVAANWE 280
Query: 310 PYRSVASWYLWRFVE 324
P+R+VA+WY+WR ++
Sbjct: 281 PWRTVATWYMWRSLD 295
>gi|21230589|ref|NP_636506.1| DNA-3-methyladenine glycosylase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66769416|ref|YP_244178.1| DNA-3-methyladenine glycosylase [Xanthomonas campestris pv.
campestris str. 8004]
gi|188992603|ref|YP_001904613.1| DNA-3-methyladenine glycosylase [Xanthomonas campestris pv.
campestris str. B100]
gi|21112168|gb|AAM40430.1| DNA-3-methyladenine glycosylase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66574748|gb|AAY50158.1| DNA-3-methyladenine glycosylase [Xanthomonas campestris pv.
campestris str. 8004]
gi|167734363|emb|CAP52573.1| DNA-3-methyladenine glycosylase, probable [Xanthomonas campestris
pv. campestris]
Length = 213
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 114/199 (57%), Gaps = 6/199 (3%)
Query: 131 AIRHLRNADRQLASLID----IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFI 186
A HL +DR L + + I P P + P AL R+IL+QQL+ KA +I R +
Sbjct: 2 AFTHLARSDRALGAWMRRIGPIAPQPGWRKPFDPVDALARAILFQQLSGKAAATIVGR-V 60
Query: 187 ALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNG-ILSDSAIVNMDDKS 245
+ G + + +T+ + LR GVSG KA L DLAR+ G I S + M+D +
Sbjct: 61 EVAIGASRLHADTLGRVDDAALRACGVSGNKALALRDLARREALGEIPSLRKLAFMEDDA 120
Query: 246 LFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLC 305
+ L V GIG W+V M ++F L RPD+LPI+DLGVRKG Q + ++P P ++ +
Sbjct: 121 IVEALVPVRGIGRWTVEMMLMFRLGRPDLLPIDDLGVRKGAQRVDKQAQMPTPKELAERG 180
Query: 306 EKWRPYRSVASWYLWRFVE 324
E+W PYR+ A++YLW+ +
Sbjct: 181 ERWGPYRTYAAFYLWKIAD 199
>gi|172037923|ref|YP_001804424.1| putative DNA-3-methyladenine glycosylase II [Cyanothece sp. ATCC
51142]
gi|354556630|ref|ZP_08975922.1| HhH-GPD family protein [Cyanothece sp. ATCC 51472]
gi|171699377|gb|ACB52358.1| putative DNA-3-methyladenine glycosylase II [Cyanothece sp. ATCC
51142]
gi|353551404|gb|EHC20808.1| HhH-GPD family protein [Cyanothece sp. ATCC 51472]
Length = 206
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 108/191 (56%), Gaps = 3/191 (1%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A +L D LA LI +P T +++ PFL L ++I+ QQ++ A SI + L G
Sbjct: 10 AKEYLTLKDPILAELIASYPSETMLNYYNPFLTLMKAIIGQQISVAAAHSISRKVENLLG 69
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
+ L + LRQ G+S +K Y+ ++A+ ++ GIL+ + M D+ + L
Sbjct: 70 S---ISINNYLEIDELSLRQCGLSRQKILYIRNVAQAFEEGILTPQSWETMSDQEITKQL 126
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRP 310
T + GIGSW+ MF+IF LHR D+ P+ DLG+ +Q Y L Q+ +L + W+P
Sbjct: 127 TSIKGIGSWTAQMFLIFHLHRKDIFPMADLGLINAIQRHYGNTNLLTKEQIKELSQPWKP 186
Query: 311 YRSVASWYLWR 321
YR+VA+WYLWR
Sbjct: 187 YRTVATWYLWR 197
>gi|108804056|ref|YP_643993.1| DNA-3-methyladenine glycosylase II, partial [Rubrobacter
xylanophilus DSM 9941]
gi|108765299|gb|ABG04181.1| DNA-3-methyladenine glycosylase II [Rubrobacter xylanophilus DSM
9941]
Length = 163
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 95/160 (59%), Gaps = 1/160 (0%)
Query: 166 RSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLA 225
R+++ QQL+ A SIY R A GG +P + A+ ++LR GVSG KA L +LA
Sbjct: 2 RTVVGQQLSVGAARSIYARLCARFGGRP-PLPGELEAVPDEELRACGVSGAKARCLRELA 60
Query: 226 RKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKG 285
R+ G L + + D + + LT V GIG WS MF+IF L RPDVLP DLG+R+
Sbjct: 61 RRVLEGGLPLEELRGLPDGEVISALTAVRGIGRWSAQMFLIFHLRRPDVLPAADLGIRRA 120
Query: 286 VQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEA 325
LLY L ELP +++L WRP+R+ A YLWR ++A
Sbjct: 121 AALLYGLPELPAEELLERLAAPWRPWRTTACLYLWRSLDA 160
>gi|262277717|ref|ZP_06055510.1| DNA-3-methyladenine glycosylase I [alpha proteobacterium HIMB114]
gi|262224820|gb|EEY75279.1| DNA-3-methyladenine glycosylase I [alpha proteobacterium HIMB114]
Length = 205
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 109/192 (56%), Gaps = 4/192 (2%)
Query: 133 RHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGE 192
++L D+ L LI + + PF +L +SI+ QQ++ +A +S++ + L
Sbjct: 12 KYLSKKDKILGKLIKKYKG-NLKTRSDPFFSLCKSIVGQQISVQAASSVWKK---LETKA 67
Query: 193 AGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTM 252
+ P+ + LTP+QL G+S +K SYL LA+K+ N L + M+D+ L
Sbjct: 68 KKIHPKNIYKLTPKQLASCGLSRQKISYLKILAKKFLNKELDIKKLKKMNDQDAIKYLVQ 127
Query: 253 VNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYR 312
V GIG W+ MF+ F+ RPD+ P+ D+G+ +G+ Y + P PSQ+ + E+W PY
Sbjct: 128 VKGIGVWTAEMFLFFNQMRPDIFPVQDIGLLRGISNNYKTKYPPSPSQLKKFKERWSPYC 187
Query: 313 SVASWYLWRFVE 324
+VA+WYLWR ++
Sbjct: 188 TVATWYLWRSID 199
>gi|83748222|ref|ZP_00945248.1| DNA-3-methyladenine glycosylase II [Ralstonia solanacearum UW551]
gi|83725063|gb|EAP72215.1| DNA-3-methyladenine glycosylase II [Ralstonia solanacearum UW551]
Length = 296
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 111/195 (56%), Gaps = 5/195 (2%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A L DR L +I P S PF+ L RSI+ QQ++ KA S++ R + C
Sbjct: 101 ACADLMKRDRILRKIIPAFGPAHLASRGDPFVTLARSIVGQQISVKAAQSVWERLVEAC- 159
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
+VP L ++L G+S RKA Y+ DLA ++NG + + M+D+ + L
Sbjct: 160 --PKLVPAQFLRAGHEKLASCGLSKRKAEYILDLAEHFRNGTVHVAKWAEMEDEDVIAEL 217
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV-QLLYSLEELPRPSQMDQLCEKWR 309
T + GIG W+ MF++F+L RP+VLP++D+G+ + Q +S E + R S+ ++ W
Sbjct: 218 TQIRGIGRWTAEMFLMFNLLRPNVLPLDDIGLINAISQNYFSGEPVTR-SEAREVAANWE 276
Query: 310 PYRSVASWYLWRFVE 324
P+R+VA+WY+WR ++
Sbjct: 277 PWRTVATWYMWRSLD 291
>gi|148545984|ref|YP_001266086.1| DNA-3-methyladenine glycosylase II [Pseudomonas putida F1]
gi|148510042|gb|ABQ76902.1| DNA-3-methyladenine glycosylase II [Pseudomonas putida F1]
Length = 207
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 99/163 (60%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R+I YQQL +A +I R +AL + PE +LA++P+ LR G S K
Sbjct: 44 PYEALVRAIAYQQLHARAAEAILGRLLALFPADDFPQPEQLLAVSPETLRACGFSASKLV 103
Query: 220 YLHDLARKYQNGIL-SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ G++ + + M D++L L + G+G W+V M +I+SL R D+LP++
Sbjct: 104 TVQGIAQATLEGLVPTREQALTMADEALIERLVALRGVGRWTVEMLLIYSLGRSDILPVD 163
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR+G + L LE P P+QM L WRP+R+VA+WYLWR
Sbjct: 164 DFGVREGYRRLKGLETAPTPAQMRSLGGAWRPFRTVAAWYLWR 206
>gi|392405300|ref|YP_006441912.1| HhH-GPD family protein [Turneriella parva DSM 21527]
gi|390613254|gb|AFM14406.1| HhH-GPD family protein [Turneriella parva DSM 21527]
Length = 211
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 114/198 (57%), Gaps = 3/198 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A HL+ +D+ LA++I +P F L R+I+ QQ++ KA SI+ R +A
Sbjct: 9 DTATTHLQRSDKTLAAIIAKYPEVKLRLKKDSFTTLARAIVGQQISVKAADSIWARVVAA 68
Query: 189 CGGEAGVV-PETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLF 247
G + P +LAL + LR G+S RK SYL +L+ +Y +G L+ + M D +
Sbjct: 69 AQGRMTKIDPAKILALNTKALRACGLSERKVSYLQNLSERYVSGHLNGQKLARMQDAEVK 128
Query: 248 TMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRP-SQMDQLCE 306
L ++GIG W+ M+M+F+L RPD+LP+ D+G+ + ++L Y E P ++ +
Sbjct: 129 KTLVALHGIGPWTADMYMMFNLWRPDILPLGDVGLVRAIELHY-FEGRKVPLEKVRKTAA 187
Query: 307 KWRPYRSVASWYLWRFVE 324
W PY +VA+WYLWR ++
Sbjct: 188 PWSPYATVATWYLWRSLD 205
>gi|398978558|ref|ZP_10687881.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Pseudomonas sp. GM25]
gi|398136958|gb|EJM26032.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Pseudomonas sp. GM25]
Length = 208
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 100/163 (61%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ +L R+I YQQL KAG +I R + L G+ PE +LA QLR G S K +
Sbjct: 39 PYESLVRAIAYQQLHAKAGDAIVGRLVGLFPGQTFPRPEQILATDFDQLRGCGFSTGKIA 98
Query: 220 YLHDLARKYQNGILSDSAI-VNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ +G++ D A + M+D++L L + G+G W+V M +I+SL RPD+LP +
Sbjct: 99 TIQGIAQATLDGVVPDYATALAMEDEALIERLVSLRGVGRWTVEMLLIYSLERPDILPAD 158
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR+G + L LE P QM ++ W+P+R+VA+WYLWR
Sbjct: 159 DFGVREGYRRLKGLEVQPTRRQMIEIGLDWKPFRTVAAWYLWR 201
>gi|330810158|ref|YP_004354620.1| DNA-3-methyladenine glycosylase II [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327378266|gb|AEA69616.1| putative DNA-3-methyladenine glycosylase II [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 214
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 101/175 (57%), Gaps = 5/175 (2%)
Query: 148 IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQ 207
+ P P D P+ AL R+I YQQL KAG +I R +AL +A P +LA Q
Sbjct: 40 LQPKPARD----PYEALVRAIAYQQLHAKAGDAILGRLLALFPAQAFPNPGQILATDVAQ 95
Query: 208 LRQIGVSGRKASYLHDLARKYQNGILSDSAIVN-MDDKSLFTMLTMVNGIGSWSVHMFMI 266
LR G S K + + +A+ + I+ D A M+D++L L + G+G W+V M +I
Sbjct: 96 LRGCGFSASKIATIQGIAQATLDAIVPDYATARAMEDEALIERLVSLRGVGRWTVEMLLI 155
Query: 267 FSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
+SL RPD+LP +D GVR+G + LE+ P QM ++ W PYR+VA+WYLWR
Sbjct: 156 YSLERPDILPADDFGVREGYRRFKGLEQQPSRKQMVEIGLAWSPYRTVAAWYLWR 210
>gi|448565277|ref|ZP_21636144.1| DNA-3-methyladenine glycosylase [Haloferax prahovense DSM 18310]
gi|445715021|gb|ELZ66777.1| DNA-3-methyladenine glycosylase [Haloferax prahovense DSM 18310]
Length = 193
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 108/195 (55%), Gaps = 7/195 (3%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A R LR AD L +++ H P + D PF L SI+ QQL+ A +I R
Sbjct: 5 AYRELR-ADPHLGDVVEEHGPLSLDPADDPFERLVVSIVNQQLSTTAAATIRDRLF---- 59
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
V PE +LA LR G+S +K Y+ ++A +++G LS ++ MDD + L
Sbjct: 60 DRVEVTPEGILAADEAVLRDCGLSNQKVGYVRNVADAFRDG-LSAESLREMDDDEVVAAL 118
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLE-ELPRPSQMDQLCEKWR 309
T + G+G W+ MF+IF L R DV P+ DLG+R+G++ ++ E + +M + E+W
Sbjct: 119 TEIRGVGDWTAKMFLIFVLAREDVFPVEDLGIRRGMERVFGFEPDAVSRGEMRERAERWA 178
Query: 310 PYRSVASWYLWRFVE 324
PYRS AS YLWR V+
Sbjct: 179 PYRSYASRYLWRCVD 193
>gi|26987441|ref|NP_742866.1| DNA-3-methyladenine glycosylase II [Pseudomonas putida KT2440]
gi|24982102|gb|AAN66330.1|AE016261_7 DNA-3-methyladenine glycosylase [Pseudomonas putida KT2440]
Length = 208
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 99/163 (60%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R+I YQQL +A +I R +AL + PE +LA++P+ LR G S K
Sbjct: 45 PYEALVRAIAYQQLHARAAEAILGRLLALFPADDFPQPEQLLAVSPETLRACGFSASKLV 104
Query: 220 YLHDLARKYQNGIL-SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ G++ + + M D++L L + G+G W+V M +I+SL R D+LP++
Sbjct: 105 TVQGIAQATLEGLVPTREQALTMADEALIERLVALRGVGRWTVEMLLIYSLGRSDILPVD 164
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR+G + L LE P P+QM L WRP+R+VA+WYLWR
Sbjct: 165 DFGVREGYRRLKGLETAPTPAQMRSLGGAWRPFRTVAAWYLWR 207
>gi|299067220|emb|CBJ38417.1| putative DNA-3-methyladenine glycosylase II [Ralstonia solanacearum
CMR15]
Length = 295
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 109/192 (56%), Gaps = 5/192 (2%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A L DR L +I P S PF+ L RSI+ QQ++ KA S++ R + C
Sbjct: 100 ACADLMKRDRILRKIIPAFGPAHLASRGDPFVTLARSIVGQQISVKAAQSVWERLVEAC- 158
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
+VP L ++L G+S RKA Y+ DLA ++NG + + M+D+ + L
Sbjct: 159 --PKLVPAQFLRAGHEKLAGCGLSKRKAEYILDLAEHFRNGTVHVAKWAEMEDEDVIAEL 216
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV-QLLYSLEELPRPSQMDQLCEKWR 309
T + GIG W+ MF++F+L RP+VLP++D+G+ + Q +S E + R S+ ++ W
Sbjct: 217 TQIRGIGRWTAEMFLMFNLLRPNVLPLDDIGLINAISQNYFSGEPVTR-SEAREVAANWE 275
Query: 310 PYRSVASWYLWR 321
P+R+VA+WY+WR
Sbjct: 276 PWRTVATWYMWR 287
>gi|397693250|ref|YP_006531130.1| DNA-3-methyladenine glycosylase II [Pseudomonas putida DOT-T1E]
gi|397329980|gb|AFO46339.1| DNA-3-methyladenine glycosylase II [Pseudomonas putida DOT-T1E]
Length = 208
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 98/163 (60%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R+I YQQL +A +I R +AL + PE +LA TP+ LR G S K
Sbjct: 45 PYEALVRAIAYQQLHARAAEAILGRLLALFPADDFPQPEQLLAETPETLRACGFSASKLV 104
Query: 220 YLHDLARKYQNGIL-SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ G++ + + M D++L L + G+G W+V M +I+SL R D+LP++
Sbjct: 105 TVQGIAQATLEGLVPTREQALTMADEALIERLVALRGVGRWTVEMLLIYSLGRSDILPVD 164
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR+G + L LE P P+QM L WRP+R+VA+WYLWR
Sbjct: 165 DFGVREGYRRLKGLETAPTPAQMRSLGGAWRPFRTVAAWYLWR 207
>gi|398876736|ref|ZP_10631889.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Pseudomonas sp. GM67]
gi|398203884|gb|EJM90697.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Pseudomonas sp. GM67]
Length = 205
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 99/163 (60%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ +L R+I YQQL +AG +I R +AL + PE +L QLR G S K +
Sbjct: 39 PYESLVRAIAYQQLHARAGDAIVGRLLALFPSASFPRPEQILGSGFDQLRSCGFSAGKIA 98
Query: 220 YLHDLARKYQNGILSDSAI-VNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ +G++ D A + MDD++L L + G+G W+V M +I+SL RPD+LP +
Sbjct: 99 TIQGIAQAALDGVVPDYATALAMDDEALIEQLITLRGVGRWTVEMLLIYSLERPDILPAD 158
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR+G + L LE P QM ++ +W PYR+VASWYLWR
Sbjct: 159 DFGVREGYRRLKGLEVQPTRKQMVEIGLEWSPYRTVASWYLWR 201
>gi|421888582|ref|ZP_16319669.1| putative DNA-3-methyladenine glycosylase II [Ralstonia solanacearum
K60-1]
gi|378966059|emb|CCF96417.1| putative DNA-3-methyladenine glycosylase II [Ralstonia solanacearum
K60-1]
Length = 304
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 111/195 (56%), Gaps = 5/195 (2%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A L DR L +I P S PF+ L RSI+ QQ++ KA S++ R + C
Sbjct: 109 ACADLMKRDRILRKIIPAFGPAHLASRGDPFVTLARSIVGQQISVKAAQSVWERLVEAC- 167
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
+VP L ++L G+S RKA Y+ DLA ++NG + + M+D+ + L
Sbjct: 168 --PKLVPAQFLRAGHEKLAGCGLSKRKAEYILDLAEHFRNGTVHVAKWAEMEDEDVIAEL 225
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV-QLLYSLEELPRPSQMDQLCEKWR 309
T + GIG W+ MF++F+L RP+VLP++D+G+ + Q +S E + R S+ ++ W
Sbjct: 226 TQIRGIGRWTAEMFLMFNLLRPNVLPLDDIGLINAISQNYFSGEPVTR-SEAREVAANWE 284
Query: 310 PYRSVASWYLWRFVE 324
P+R+VA+WY+WR ++
Sbjct: 285 PWRTVATWYMWRSLD 299
>gi|448600869|ref|ZP_21656248.1| DNA-3-methyladenine glycosylase [Haloferax alexandrinus JCM 10717]
gi|445734882|gb|ELZ86438.1| DNA-3-methyladenine glycosylase [Haloferax alexandrinus JCM 10717]
Length = 193
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 107/195 (54%), Gaps = 7/195 (3%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A R LR AD L ++D H P + D PF L SI+ QQL+ A +I R
Sbjct: 5 AYRELR-ADPHLGDVVDEHGPLSLDPADDPFERLVVSIVNQQLSTTAAATIRDRLF---- 59
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
V PE +LA LR G+S +K Y+ ++A +++G LS + MDD + L
Sbjct: 60 DRVEVTPEGILAADEDVLRDCGLSNQKVGYVRNVADAFRDG-LSAEWLREMDDGEVVAAL 118
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLE-ELPRPSQMDQLCEKWR 309
T + G+G W+ MF+IF L R DV P+ DLG+R+G++ ++ E + +M + E+W
Sbjct: 119 TEIRGVGDWTAKMFLIFVLAREDVFPVEDLGIRRGMEHVFGFEQDAVSRGEMRERAERWA 178
Query: 310 PYRSVASWYLWRFVE 324
PYRS AS YLWR V+
Sbjct: 179 PYRSYASRYLWRCVD 193
>gi|448583121|ref|ZP_21646590.1| DNA-3-methyladenine glycosylase [Haloferax gibbonsii ATCC 33959]
gi|445730078|gb|ELZ81670.1| DNA-3-methyladenine glycosylase [Haloferax gibbonsii ATCC 33959]
Length = 193
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 108/195 (55%), Gaps = 7/195 (3%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A R LR AD L +++ H P + D PF L SI+ QQL+ A +I R
Sbjct: 5 AYRELR-ADPHLGDVVEEHGPLSLDPADDPFERLVVSIVNQQLSTTAAATIRDRLF---- 59
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
V PE +LA LR G+S +K Y+ ++A +++G LS ++ MDD + L
Sbjct: 60 DRVEVTPEGILAADEAVLRDCGLSNQKVGYVRNVADAFRDG-LSAESLRKMDDDEVVAAL 118
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLE-ELPRPSQMDQLCEKWR 309
T + G+G W+ MF+IF L R DV P+ DLG+R+G++ ++ E + +M + E+W
Sbjct: 119 TEIRGVGDWTAKMFLIFVLAREDVFPVEDLGIRRGMEHVFGFEPDAVSRGEMRERAERWA 178
Query: 310 PYRSVASWYLWRFVE 324
PYRS AS YLWR V+
Sbjct: 179 PYRSYASRYLWRCVD 193
>gi|296536054|ref|ZP_06898191.1| DNA-3-methyladenine glycosylase, partial [Roseomonas cervicalis
ATCC 49957]
gi|296263615|gb|EFH10103.1| DNA-3-methyladenine glycosylase [Roseomonas cervicalis ATCC 49957]
Length = 210
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 99/163 (60%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R+I +QQ+ +A ++ R +AL G+ PE VLAL + LR G SG K +
Sbjct: 32 PYEALVRAIAHQQVHGRAAEAMLNRLLALFPGQDFPHPEGVLALPEEALRGCGFSGAKVA 91
Query: 220 YLHDLARKYQNGIL-SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ D+A K G++ + A + D++L L + G+G W+V M +IF+L RPD+LP++
Sbjct: 92 AIRDIALKTVGGLVPTRRAAARLPDEALIERLVALRGVGRWTVEMLLIFTLGRPDILPVD 151
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR+G +L + P+P + + E W P+RS A+WYLWR
Sbjct: 152 DFGVREGYRLATGADAQPKPKALAAIGEAWAPHRSAAAWYLWR 194
>gi|332530125|ref|ZP_08406074.1| HhH-GPD [Hylemonella gracilis ATCC 19624]
gi|332040395|gb|EGI76772.1| HhH-GPD [Hylemonella gracilis ATCC 19624]
Length = 243
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 105/193 (54%), Gaps = 3/193 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A +HL DR + +I H ++ F+ L RSI+ QQ++ KA S++ RF AL
Sbjct: 45 DEACKHLMKKDRVMNRIIPQHGGACLETRGDAFVTLARSIVGQQISVKAAQSVWERFAAL 104
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
+ P VL L +R G+S RK YL DLA + +G + + MDD+++
Sbjct: 105 ---PRRMTPGNVLKLKVDDMRAAGLSARKVEYLVDLALHFDSGAIRVADWKAMDDEAIIA 161
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
L + GIG W+ MF+IF L RP+VLP++D+G+ G+ Y E S ++ W
Sbjct: 162 ELVGIRGIGRWTAEMFLIFHLMRPNVLPLDDIGLLNGISRNYFSGEAVSRSDAREVAAAW 221
Query: 309 RPYRSVASWYLWR 321
P+ SVA+WY+WR
Sbjct: 222 APFCSVATWYIWR 234
>gi|300704461|ref|YP_003746064.1| DNA-3-methyladenine glycosylase II [Ralstonia solanacearum
CFBP2957]
gi|299072125|emb|CBJ43457.1| putative DNA-3-methyladenine glycosylase II [Ralstonia solanacearum
CFBP2957]
Length = 304
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 109/192 (56%), Gaps = 5/192 (2%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A L DR L +I P S PF+ L RSI+ QQ++ KA S++ R + C
Sbjct: 109 ACADLMKRDRILRKIIPAFGPAHLASRGDPFVTLARSIVGQQISVKAAQSVWERLVEAC- 167
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
+VP L ++L G+S RKA Y+ DLA ++NG + + M+D+ + L
Sbjct: 168 --PKLVPAQFLRAGHEKLAGCGLSKRKAEYILDLAEHFRNGTVHVAKWAEMEDEDVIAEL 225
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV-QLLYSLEELPRPSQMDQLCEKWR 309
T + GIG W+ MF++F+L RP+VLP++D+G+ + Q +S E + R S+ ++ W
Sbjct: 226 TQIRGIGRWTAEMFLMFNLLRPNVLPLDDIGLINAISQNYFSGEPVTR-SEAREVAANWE 284
Query: 310 PYRSVASWYLWR 321
P+R+VA+WY+WR
Sbjct: 285 PWRTVATWYMWR 296
>gi|344174362|emb|CCA86153.1| putative DNA-3-methyladenine glycosylase II [Ralstonia syzygii R24]
Length = 299
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 109/192 (56%), Gaps = 5/192 (2%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A L DR L +I P S PF+ L RSI+ QQ++ KA S++ R + C
Sbjct: 104 ACADLMKRDRILRKIIPAFGPAHLASRGDPFVTLARSIVGQQISVKAAQSVWERLVEAC- 162
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
+VP L ++L G+S RKA Y+ DLA ++NG + + M+D+ + L
Sbjct: 163 --PKLVPAQFLRAGHEKLAGCGLSKRKAEYILDLAEHFRNGTVHVAKWAEMEDEDVIAEL 220
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV-QLLYSLEELPRPSQMDQLCEKWR 309
T + GIG W+ MF++F+L RP+VLP++D+G+ + Q +S E + R S+ ++ W
Sbjct: 221 TQIRGIGRWTAEMFLMFNLLRPNVLPLDDIGLINAISQNYFSGEPVTR-SEAREVAANWE 279
Query: 310 PYRSVASWYLWR 321
P+R+VA+WY+WR
Sbjct: 280 PWRTVATWYMWR 291
>gi|94310031|ref|YP_583241.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Cupriavidus metallidurans CH34]
gi|93353883|gb|ABF07972.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Cupriavidus metallidurans CH34]
Length = 261
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 115/216 (53%), Gaps = 11/216 (5%)
Query: 114 VPRIIARPLSSEGEVEA--------AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALT 165
+P + A PL E V+A A L DR L +I + P S PF+ L
Sbjct: 40 LPEVDAVPLPVETVVDAVRPAYWDEACADLMKRDRILRKMIPTYGPAHLVSRGDPFVTLA 99
Query: 166 RSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLA 225
RSI+ QQ++ KA S++ R A C + P L ++L G+S RKA Y+ DLA
Sbjct: 100 RSIVGQQISVKAAQSVWERLAARC---PRLTPAQFLKSGSEELAGCGLSKRKAEYIIDLA 156
Query: 226 RKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKG 285
++ G + V MDD+++ LT + GIG W+ MF++F+L RP+VLP++D+G+
Sbjct: 157 DHFKAGRVHVKEWVAMDDEAVIAELTQIRGIGRWTAEMFLMFNLMRPNVLPLDDVGLINA 216
Query: 286 VQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
+ Y E S+ ++ W P+R+VA+WY+WR
Sbjct: 217 ISTNYFSGEPVTRSEAREVAANWEPWRTVATWYMWR 252
>gi|213404852|ref|XP_002173198.1| DNA-3-methyladenine glycosylase [Schizosaccharomyces japonicus
yFS275]
gi|212001245|gb|EEB06905.1| DNA-3-methyladenine glycosylase [Schizosaccharomyces japonicus
yFS275]
Length = 268
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 107/192 (55%), Gaps = 4/192 (2%)
Query: 134 HLRNADRQLASLIDI--HPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGG 191
HL + D +++ H + P+ AL R++ YQQL KAG +I R +A
Sbjct: 60 HLASIDEHWKRVVEAIGHTSFRVEKVRQPYEALIRAVAYQQLTTKAGKAIINRLVAKASA 119
Query: 192 EAGV-VPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGIL-SDSAIVNMDDKSLFTM 249
G PE +LAL +QL+ G S RK + ++AR + G++ S A M ++ L
Sbjct: 120 TGGFPTPEEILALEQEQLKSCGFSRRKTDTIREIARGVETGLIPSLDAAHEMVNEELIER 179
Query: 250 LTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWR 309
L+ ++GIG W+ M +IF + R DVLP DL +R G + LY++++LP + ++L
Sbjct: 180 LSQIHGIGRWTAEMLLIFGMGRLDVLPAGDLKIRDGFRYLYAMDKLPSLRETNELGCACA 239
Query: 310 PYRSVASWYLWR 321
PYRS+A+WYL+R
Sbjct: 240 PYRSIATWYLYR 251
>gi|421749863|ref|ZP_16187218.1| HhH-GPD [Cupriavidus necator HPC(L)]
gi|409771194|gb|EKN53574.1| HhH-GPD [Cupriavidus necator HPC(L)]
Length = 301
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 116/220 (52%), Gaps = 13/220 (5%)
Query: 114 VPRIIARPLSSEGEVEAAIR---------HLRNADRQLASLIDIHPPPTFDSFHTPFLAL 164
+P A PL E VE A+R L DR L +I + P S PF+ L
Sbjct: 80 LPEAAAIPLPVE-TVEGAVRPAYWDEACADLMKRDRILRKMIPTYGPAHLISRGDPFITL 138
Query: 165 TRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDL 224
RSI+ QQ++ KA S++ R A C + P +L +L G+S RKA Y+ DL
Sbjct: 139 ARSIVGQQISVKAAQSVWDRLAAAC---PKLTPAQLLRAGVDKLAACGLSRRKAEYIVDL 195
Query: 225 ARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRK 284
A ++ G + MDD+++ LT + GIG W+ MF++F+L RP+VLP++D+G+
Sbjct: 196 ADHFKAGRVHVDKWAEMDDEAVIAELTQIRGIGRWTAEMFLMFNLMRPNVLPLDDIGLIN 255
Query: 285 GVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
+ Y E S+ ++ W P+R+VA+WY+WR ++
Sbjct: 256 AISANYFSGEPVTRSEAREVAANWEPWRTVATWYMWRSLD 295
>gi|219850496|ref|YP_002464929.1| DNA-3-methyladenine glycosylase II [Chloroflexus aggregans DSM
9485]
gi|219544755|gb|ACL26493.1| DNA-3-methyladenine glycosylase II [Chloroflexus aggregans DSM
9485]
Length = 199
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 110/195 (56%), Gaps = 3/195 (1%)
Query: 128 VEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIA 187
+E A+ +L D LA ID F L +I+ QQL+ A +I R
Sbjct: 1 MEQALNYLCTVDPVLAPWIDQIGSFALQRQPHSFATLAYAIISQQLSLNAARAIRDRLTT 60
Query: 188 LCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLF 247
L G + PE +LA LR G+S +K+ YL DLA + G ++ + +DD++
Sbjct: 61 LLGE---LTPEQILAADTTALRAAGLSMQKSGYLRDLAERIVYGQINLELLPTLDDETAI 117
Query: 248 TMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEK 307
MLT V GIG W+ ++++F+L+R D+LP +DLG+R G +L+Y L ++ P ++ L E+
Sbjct: 118 AMLTNVRGIGRWTAEIYLMFALNRLDILPADDLGLRDGARLVYQLPQILSPRELRALGER 177
Query: 308 WRPYRSVASWYLWRF 322
WRPYRS+A WYLW+
Sbjct: 178 WRPYRSIACWYLWQI 192
>gi|423697807|ref|ZP_17672297.1| DNA-3-methyladenine glycosylase [Pseudomonas fluorescens Q8r1-96]
gi|388004912|gb|EIK66179.1| DNA-3-methyladenine glycosylase [Pseudomonas fluorescens Q8r1-96]
Length = 205
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 102/175 (58%), Gaps = 5/175 (2%)
Query: 148 IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQ 207
+ P P D P+ AL R+I YQQL KAG +I R +AL +A P +LA Q
Sbjct: 31 LQPKPARD----PYEALVRAIAYQQLHAKAGDAILGRLLALFPAQAFPNPGQILATDVAQ 86
Query: 208 LRQIGVSGRKASYLHDLARKYQNGILSDSAIVN-MDDKSLFTMLTMVNGIGSWSVHMFMI 266
LR G S K + + +A+ + I+ D A M+D++L L + G+G W+V M +I
Sbjct: 87 LRGCGFSASKIATIQGIAQATLDAIVPDYATARAMEDEALIERLVSLRGVGRWTVEMLLI 146
Query: 267 FSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
+SL RPD+LP +D GVR+G + L LE+ P +M ++ W PYR+VA+WYLWR
Sbjct: 147 YSLERPDILPADDFGVREGYRRLKGLEQQPSRKRMVEIGLAWSPYRTVAAWYLWR 201
>gi|451812031|ref|YP_007448485.1| DNA-3-methyladenine glycosylase II [Candidatus
Kinetoplastibacterium galatii TCC219]
gi|451777933|gb|AGF48881.1| DNA-3-methyladenine glycosylase II [Candidatus
Kinetoplastibacterium galatii TCC219]
Length = 208
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 111/196 (56%), Gaps = 2/196 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
E A+ L+ DR L +I ++ +PF+ L SI+ QQ++ K+ I+ +FI +
Sbjct: 13 EQAVSDLKKKDRILKRIIPLYSEKKLLPSESPFITLVHSIVNQQISTKSACVIWGKFIKI 72
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
G PE ++ + L IG+ RK YL+DLA + ++ V+MDD+S+ +
Sbjct: 73 FGKLPS--PEDIICCRRENLNSIGLPRRKVEYLNDLAIHFYEKKINPDKWVSMDDESVIS 130
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
L+ + GIG W+ MF+IFSL RPDV+P++D G+ + + L Y E + ++ W
Sbjct: 131 ELSSIKGIGRWTSEMFLIFSLCRPDVMPLDDAGLIRAISLHYFSGEPVSRFEAREVSMAW 190
Query: 309 RPYRSVASWYLWRFVE 324
RP+R+VASWYLW +E
Sbjct: 191 RPWRTVASWYLWCSIE 206
>gi|119898124|ref|YP_933337.1| DNA-3-methyladenine glycosylase II [Azoarcus sp. BH72]
gi|119670537|emb|CAL94450.1| DNA-3-methyladenine glycosylase II [Azoarcus sp. BH72]
Length = 229
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 109/198 (55%), Gaps = 11/198 (5%)
Query: 131 AIRHLRNADRQLASLID------IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTR 184
A HL D A L+ + P P P+ AL R++ YQQLA G I R
Sbjct: 18 ATAHLAGIDADWARLVTAVGPCLLQPKPA----REPYEALVRAVAYQQLATSVGDRIIGR 73
Query: 185 FIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGIL-SDSAIVNMDD 243
+AL A PE +LA LR G S RK +H +A+ +G++ S + V+MDD
Sbjct: 74 LLALYPDSAFPQPEQLLATGFDALRGCGFSARKIETIHGIAQGTLSGLVPSRADAVSMDD 133
Query: 244 KSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQ 303
++L L + GIG W+V M +IF+L R DVLP++D GVR+G + L SL+E+P +M +
Sbjct: 134 EALIARLVELRGIGRWTVEMLLIFTLERIDVLPVDDFGVREGYRHLKSLDEMPGRKEMAR 193
Query: 304 LCEKWRPYRSVASWYLWR 321
PYR+VA+WYLWR
Sbjct: 194 AGLVCSPYRTVAAWYLWR 211
>gi|70730029|ref|YP_259768.1| DNA-3-methyladenine glycosylase [Pseudomonas protegens Pf-5]
gi|68344328|gb|AAY91934.1| DNA-3-methyladenine glycosylase [Pseudomonas protegens Pf-5]
Length = 203
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 99/163 (60%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R++ YQQL +AG +I R AL G+ P + A + + LR G S RK +
Sbjct: 37 PYQALVRAVAYQQLHARAGDAILGRLRALFPGQDFPTPGQLAAASLESLRGCGFSARKVA 96
Query: 220 YLHDLARKYQNGILSDSAIV-NMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
L +A+ +G + D+A +DD+ L L + GIG W+V M +I+SL R D+LP++
Sbjct: 97 TLQGIAQATLDGRVPDAASARGLDDEQLIERLIQLPGIGRWTVEMLLIYSLEREDILPVD 156
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR+G + L LE+ P P Q+ Q+ + W P+R+ A+WYLWR
Sbjct: 157 DFGVREGYRRLKDLEKQPSPRQLRQIGQAWSPWRTTAAWYLWR 199
>gi|433417078|ref|ZP_20404620.1| DNA-3-methyladenine glycosylase [Haloferax sp. BAB2207]
gi|432200152|gb|ELK56261.1| DNA-3-methyladenine glycosylase [Haloferax sp. BAB2207]
Length = 193
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 108/195 (55%), Gaps = 7/195 (3%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A R LR AD L ++D H P + D PF L SI+ QQL+ A +I R
Sbjct: 5 AYRELR-ADPHLGDVVDEHGPLSLDPADDPFERLVVSIVNQQLSTTAAATIRDRLF---- 59
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
V PE +LA LR G+S +K Y+ ++A +++G LS ++ M D + + L
Sbjct: 60 DRVEVTPEGILAADEDVLRDCGLSNQKVGYVRNVADAFRDG-LSAESLREMGDGEVVSAL 118
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLE-ELPRPSQMDQLCEKWR 309
T + G+G W+ MF+IF L R DV P+ DLG+R+G++ ++ E + +M + E+W
Sbjct: 119 TEIRGVGDWTAKMFLIFVLAREDVFPVEDLGIRRGMEHVFGFEQDAVSRGEMRERAERWA 178
Query: 310 PYRSVASWYLWRFVE 324
PYRS AS YLWR V+
Sbjct: 179 PYRSYASRYLWRCVD 193
>gi|448355694|ref|ZP_21544443.1| HhH-GPD family protein [Natrialba hulunbeirensis JCM 10989]
gi|445634402|gb|ELY87581.1| HhH-GPD family protein [Natrialba hulunbeirensis JCM 10989]
Length = 209
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 113/202 (55%), Gaps = 5/202 (2%)
Query: 138 ADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVP 197
AD + L+D H P + T + L SI+ QQL+ + ++ R + E V P
Sbjct: 11 ADPVMDQLVDAHDPYVEPDW-TEYERLCISIINQQLSTASAAAVRERVFDVLEDE--VSP 67
Query: 198 ETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIG 257
ETVLA Q LR G+S K Y+ + AR +Q + + + ++D+ + LT + GIG
Sbjct: 68 ETVLAADDQALRDAGLSRSKVDYIRNAARAFQEQDFTRAGLADVDNDEVVDRLTEIKGIG 127
Query: 258 SWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLY-SLEELPRPSQMDQLCEKWRPYRSVAS 316
W+ M+++F L RPD+LP+ DL VR+G++ LY + EEL R ++M + E WRPYRSVA+
Sbjct: 128 EWTARMYLLFVLERPDILPLGDLAVRRGIEQLYGNGEELTR-AEMRDIAEDWRPYRSVAT 186
Query: 317 WYLWRFVEAKGAPSSAAAVAAG 338
Y+W EA + A A G
Sbjct: 187 RYIWAEYEADSSIDLADVDARG 208
>gi|30248984|ref|NP_841054.1| HhH-GPD [Nitrosomonas europaea ATCC 19718]
gi|30138601|emb|CAD84892.1| HhH-GPD [Nitrosomonas europaea ATCC 19718]
Length = 205
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 96/161 (59%), Gaps = 3/161 (1%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASY 220
F L R+I+ QQ++ KA S++ + L + PE ++A LR G+S RK Y
Sbjct: 39 FATLARAIVGQQISVKAAASVWQKVTTLI---PEITPEALIATEIDLLRTCGLSARKVDY 95
Query: 221 LHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDL 280
L DL+R + G L ++DD++L L V GIG W+ MF+IF LHRPDVLP++D+
Sbjct: 96 LRDLSRHFLEGTLVTVNWHDLDDETLIRKLVEVKGIGRWTAEMFLIFHLHRPDVLPLDDI 155
Query: 281 GVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
G+++ V L Y+ + + + E W+P+RSVA+WYLWR
Sbjct: 156 GLQRAVSLHYNASQPVAKQAIRTIAESWQPWRSVATWYLWR 196
>gi|398890353|ref|ZP_10643990.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM55]
gi|398188317|gb|EJM75625.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM55]
Length = 205
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 99/163 (60%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ +L R+I YQQL KAG +I R +AL G + PE ++A +LR G S K +
Sbjct: 39 PYESLVRAIAYQQLHAKAGDAIVGRLLALFGSGSFPRPEQIVATDFDRLRSCGFSASKIA 98
Query: 220 YLHDLARKYQNGILSDSAI-VNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ +G++ D + MDD++L L + G+G W+V M +I+SL RPD+LP +
Sbjct: 99 TIQGIAQAALDGVVPDYVTALAMDDEALIERLITLRGVGRWTVEMLLIYSLDRPDILPAD 158
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR+G + L LE P QM ++ W P+R+VASWYLWR
Sbjct: 159 DFGVREGYKRLKGLEVQPTRRQMIEIGMGWSPFRTVASWYLWR 201
>gi|385209050|ref|ZP_10035918.1| HhH-GPD superfamily base excision DNA repair protein [Burkholderia
sp. Ch1-1]
gi|385181388|gb|EIF30664.1| HhH-GPD superfamily base excision DNA repair protein [Burkholderia
sp. Ch1-1]
Length = 349
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 111/196 (56%), Gaps = 3/196 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P S PF+ L RS++ QQ++ + + + + A
Sbjct: 151 DKACADLVKRDRILKKLIPKFGPVHLLSRGDPFVTLARSVVGQQISVASAQAAWAKVEAA 210
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C +VP+ + L ++L G+S RKA Y+ DLA+ + +G L +M+D+++
Sbjct: 211 C---PKLVPQQFIKLGLEKLTTCGLSKRKAEYVLDLAQHFVSGALHVGKWTSMEDEAVIA 267
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GIG W+ MF+IF+L RPDVLP++DLG+ + + + Y E S+ ++ W
Sbjct: 268 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 327
Query: 309 RPYRSVASWYLWRFVE 324
P+R+VA+WY+WR ++
Sbjct: 328 EPWRTVATWYMWRSLD 343
>gi|241764152|ref|ZP_04762187.1| HhH-GPD family protein [Acidovorax delafieldii 2AN]
gi|241366489|gb|EER60989.1| HhH-GPD family protein [Acidovorax delafieldii 2AN]
Length = 231
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 108/192 (56%), Gaps = 5/192 (2%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A +HL DR + LI + F L RSI+ QQ++ KA +++ RF AL
Sbjct: 35 ACKHLVKKDRVMKRLIPQFGDAALQTRGDAFTTLARSIVGQQISVKAAQTVWERFAAL-- 92
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
G+ P VL L +R G+S RK YL DLA ++ G L + MDD+++ L
Sbjct: 93 -PRGMKPGNVLKLKIDDMRAAGLSARKVDYLVDLALHFEGGKLHVTDWAAMDDEAIIAEL 151
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV-QLLYSLEELPRPSQMDQLCEKWR 309
+ GIG W+ MF+IF L RP+VLP++D+G+ G+ Q +S + + R S ++ E W+
Sbjct: 152 VAIRGIGRWTAEMFLIFYLMRPNVLPLDDVGLINGISQNYFSGDPVSR-SDAREVAEAWK 210
Query: 310 PYRSVASWYLWR 321
P+ SVA+WY+WR
Sbjct: 211 PWCSVATWYIWR 222
>gi|340787524|ref|YP_004752989.1| DNA-3-methyladenine glycosylase II [Collimonas fungivorans Ter331]
gi|340552791|gb|AEK62166.1| DNA-3-methyladenine glycosylase II [Collimonas fungivorans Ter331]
Length = 221
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 111/205 (54%), Gaps = 13/205 (6%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHT-----PFLALTRSILYQQLAFKAGTSIYT 183
E A L DR + LI P F H F L RS++ QQ++ KA S +
Sbjct: 18 EDAKAELMKRDRIMRKLI-----PQFGDLHLVGRGEAFTTLARSVVGQQVSVKAAESAWQ 72
Query: 184 RFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDD 243
+F+ +C P VL P+QL G+S RKA Y+ DLA ++ ++ + MDD
Sbjct: 73 KFLLVC---PKTTPAQVLKAGPEQLAACGLSKRKADYILDLADHFKAKRVNAEQWMEMDD 129
Query: 244 KSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQ 303
+ + LT + GIG W+ MF+IF+L RP++LP++DLG+ KG+ + Y E S +
Sbjct: 130 EDVIADLTQIRGIGRWTAEMFLIFNLLRPNILPLDDLGLLKGISVNYFSGEPVSRSDARE 189
Query: 304 LCEKWRPYRSVASWYLWRFVEAKGA 328
+ W P+R+VA+WYLWR ++A A
Sbjct: 190 VSANWEPWRTVATWYLWRSLDATSA 214
>gi|336253977|ref|YP_004597084.1| HhH-GPD family protein [Halopiger xanaduensis SH-6]
gi|335337966|gb|AEH37205.1| HhH-GPD family protein [Halopiger xanaduensis SH-6]
Length = 203
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 107/190 (56%), Gaps = 11/190 (5%)
Query: 142 LASLIDIHPP---PTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPE 198
+ LI+ H P P + + L SI+ QQL+ + ++ R L GE V PE
Sbjct: 15 MERLIEAHEPYVEPDWSEYER----LCISIINQQLSTASAMAVRERVFELLEGE--VTPE 68
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
TVLA LR G+S K Y+ + AR +Q + A+ + D+ + +LT + GIG
Sbjct: 69 TVLAAEDDALRDAGLSRSKIEYMRNAARAFQENDYTRDALADYSDEEVIDLLTEIKGIGE 128
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPR--PSQMDQLCEKWRPYRSVAS 316
W+ +M+++F L RPDVLP+ DL VR+G++ LY E P++M ++ E WRPYRSVA+
Sbjct: 129 WTANMYLLFVLERPDVLPLGDLAVRRGIEQLYGDGEPDEMTPAEMREIAEAWRPYRSVAT 188
Query: 317 WYLWRFVEAK 326
Y+W EA+
Sbjct: 189 RYIWAEYEAE 198
>gi|398868043|ref|ZP_10623469.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM78]
gi|398234613|gb|EJN20476.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM78]
Length = 205
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 98/163 (60%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ +L R+I YQQL KAG +I R +AL A PE ++A +LR G S K +
Sbjct: 39 PYESLVRAIAYQQLHAKAGDAIIGRLLALYPSVAFPRPEQIVATDFDRLRSCGFSASKIA 98
Query: 220 YLHDLARKYQNGILSDSAI-VNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ G++ D A + MDD++L L + G+G W+V M +I+SL RPD+LP +
Sbjct: 99 TIQGIAQAALEGVVPDYATALAMDDEALIERLVTLRGVGRWTVEMLLIYSLERPDILPAD 158
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR+G + L LE P QM ++ W PYR+VA+WYLWR
Sbjct: 159 DFGVREGYRRLKGLEVQPMRKQMIEIGLAWSPYRTVAAWYLWR 201
>gi|407939985|ref|YP_006855626.1| HhH-GPD family protein [Acidovorax sp. KKS102]
gi|407897779|gb|AFU46988.1| HhH-GPD family protein [Acidovorax sp. KKS102]
Length = 224
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 109/192 (56%), Gaps = 4/192 (2%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A +HL DR + LI + PF+ L RSI+ QQ++ + +++ RF+AL
Sbjct: 27 ACKHLVKKDRVMKRLIPQFGDAALQTKGDPFITLARSIVGQQVSVASAQAVWERFVALL- 85
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
G+ P +VL L +R G+S RK YL DLA ++ G L MDD+++ L
Sbjct: 86 -PRGMKPASVLKLKIDDMRAAGLSARKVDYLVDLAMHFEGGKLHVKDWAAMDDEAIIAEL 144
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV-QLLYSLEELPRPSQMDQLCEKWR 309
+ GIG W+ MF+IF L RP+VLP++D G+ G+ Q +S + + R S ++ E W+
Sbjct: 145 VAIRGIGRWTAEMFLIFYLMRPNVLPLDDPGLISGISQNYFSGDPVSR-SDAREVAEAWK 203
Query: 310 PYRSVASWYLWR 321
P+ SVA+WY+WR
Sbjct: 204 PWCSVATWYIWR 215
>gi|398994355|ref|ZP_10697257.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Pseudomonas sp. GM21]
gi|398132227|gb|EJM21507.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Pseudomonas sp. GM21]
Length = 205
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 99/163 (60%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ +L R+I YQQL KAG +I R +AL A PE +LA QLR G S K +
Sbjct: 39 PYESLVRAIAYQQLHAKAGDAIVGRLLALFPSAAFPRPEQILAAGFDQLRSCGFSAGKIA 98
Query: 220 YLHDLARKYQNGILSDSAI-VNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ +G++ + A + M+D++L L + G+G W+V M +I+SL RPD+LP +
Sbjct: 99 TIQGIAQATLDGVVPEYATALAMEDEALIERLITLRGVGRWTVEMLLIYSLERPDILPAD 158
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR+G + L LE P QM ++ W PYR+VA+WYLWR
Sbjct: 159 DFGVREGYRRLKGLEVQPTRKQMVEIGLAWSPYRTVAAWYLWR 201
>gi|322368774|ref|ZP_08043341.1| HhH-GPD family protein [Haladaptatus paucihalophilus DX253]
gi|320551505|gb|EFW93152.1| HhH-GPD family protein [Haladaptatus paucihalophilus DX253]
Length = 205
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 113/199 (56%), Gaps = 7/199 (3%)
Query: 123 SSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIY 182
++ + E+A R LR D +A L+D H P T +S T + L SI+ QQL+ + ++
Sbjct: 7 GAKADAESAERVLRE-DPVMAELLDKHDPYT-ESNWTEYERLCISIINQQLSTASAAAVK 64
Query: 183 TRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMD 242
R AL G V PETVL LR G+S K YL + AR ++ + +
Sbjct: 65 ERVFALLGE---VTPETVLDAGEADLRDAGLSRTKVEYLKNAARAFRRNDFTAEGLAAHS 121
Query: 243 DKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYS-LEELPRPSQM 301
++ + LT + G+G W+ M+++F L R D+LP+ DL VR+G+Q LY EEL R +M
Sbjct: 122 NEEVVDALTEIKGVGDWTARMYLLFVLEREDILPLGDLAVRRGIQQLYGDGEELTR-EEM 180
Query: 302 DQLCEKWRPYRSVASWYLW 320
++ E+WRPYRSVA+ Y+W
Sbjct: 181 REIGERWRPYRSVATRYIW 199
>gi|337279179|ref|YP_004618651.1| DNA glycosylase [Ramlibacter tataouinensis TTB310]
gi|334730256|gb|AEG92632.1| Candidate DNA glycosylase [Ramlibacter tataouinensis TTB310]
Length = 216
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 103/193 (53%), Gaps = 3/193 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
E A RHL DR + LI S F L RSI+ QQ++ KA S++ RF L
Sbjct: 18 EEACRHLARKDRVMKRLIPQFGDACLQSRGDAFTTLARSIVGQQISVKAAQSVWDRFAKL 77
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
+ P VL L +R G+S RK YL DLA + +G + A M+D+++ T
Sbjct: 78 ---PRRMTPAAVLKLKVDDMRAAGLSARKIEYLVDLALHFDSGAIHVDAWDRMEDEAIIT 134
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
L + GIG W+ MF+IF L RPDVLP++D+G+ G+ Y + S+ ++ W
Sbjct: 135 ELVGIRGIGRWTAEMFLIFHLMRPDVLPLDDIGLINGISKNYFSGDPVSRSEAREVAAAW 194
Query: 309 RPYRSVASWYLWR 321
PY SVA+WY+WR
Sbjct: 195 TPYCSVATWYIWR 207
>gi|78066400|ref|YP_369169.1| DNA-3-methyladenine glycosylase II [Burkholderia sp. 383]
gi|77967145|gb|ABB08525.1| DNA-3-methyladenine glycosylase II [Burkholderia sp. 383]
Length = 214
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 95/164 (57%), Gaps = 1/164 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R+I YQQL KAG +I R +AL G PE +L+ P R G S K +
Sbjct: 48 PYEALVRAIAYQQLHAKAGDAILGRLLALYPGTDFPAPEQLLSTDPALQRACGFSATKLA 107
Query: 220 YLHDLARKYQNGIL-SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ + I+ S + D +L L + G+G W+V MF+I+SL R D+LP++
Sbjct: 108 TIRSIAQATVDEIVPSLDEARRLPDATLIERLITLRGVGRWTVEMFLIYSLERSDILPVD 167
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRF 322
D GVR+G L LE+ P P QM + E W PYR+VA+WYLWR
Sbjct: 168 DFGVREGYGRLKGLEKAPTPRQMRDIGEAWSPYRTVAAWYLWRL 211
>gi|398966780|ref|ZP_10681652.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Pseudomonas sp. GM30]
gi|398145452|gb|EJM34235.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Pseudomonas sp. GM30]
Length = 209
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 98/163 (60%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ +L R+I YQQL +AG +I R +AL G+ PE VLA QLR G S K +
Sbjct: 39 PYESLVRAIAYQQLHARAGDAIVGRLVALFPGQTFPRPEQVLATDFDQLRGCGFSAGKIA 98
Query: 220 YLHDLARKYQNGILSDS-AIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ +G++ D + MDD++L L + G+G W+V M +I+SL R D+LP +
Sbjct: 99 TIQGIAQATLDGVVPDYPTALAMDDEALIERLVSLRGVGRWTVEMLLIYSLERMDILPAD 158
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR+G + L LE P QM ++ W PYR+VA+WYLWR
Sbjct: 159 DFGVREGYRRLKGLEVQPTRRQMIEIGLAWSPYRTVAAWYLWR 201
>gi|389848249|ref|YP_006350488.1| DNA-3-methyladenine glycosylase [Haloferax mediterranei ATCC 33500]
gi|448618455|ref|ZP_21666692.1| DNA-3-methyladenine glycosylase [Haloferax mediterranei ATCC 33500]
gi|388245555|gb|AFK20501.1| DNA-3-methyladenine glycosylase [Haloferax mediterranei ATCC 33500]
gi|445746826|gb|ELZ98284.1| DNA-3-methyladenine glycosylase [Haloferax mediterranei ATCC 33500]
Length = 193
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 106/195 (54%), Gaps = 7/195 (3%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A R LR D L S+++ H P T D PF L SI+ QQL+ A +I R
Sbjct: 5 AYRELRT-DPNLGSVVEDHGPLTLDPASDPFEQLVISIVNQQLSTTAAETIRNRLF---- 59
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
PE +LA LR G+S +K Y+ + A +Q+G LS ++ MDD + L
Sbjct: 60 DRVEATPEGILAADETVLRDCGLSSQKVGYVRNAADAFQDG-LSTESLHAMDDDEVIDAL 118
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSL-EELPRPSQMDQLCEKWR 309
T + G+G W+ MF+IF L R DV P+ DLG+R+G++ ++ E+ +M + E+W
Sbjct: 119 TEIRGVGVWTAKMFLIFVLAREDVFPVEDLGIRRGMEHVFGFDEDAVSRGEMRERAERWT 178
Query: 310 PYRSVASWYLWRFVE 324
PYRS AS YLWR V+
Sbjct: 179 PYRSYASLYLWRSVD 193
>gi|448311153|ref|ZP_21500926.1| HhH-GPD family protein [Natronolimnobius innermongolicus JCM 12255]
gi|445606037|gb|ELY59947.1| HhH-GPD family protein [Natronolimnobius innermongolicus JCM 12255]
Length = 197
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 106/184 (57%), Gaps = 12/184 (6%)
Query: 142 LASLIDIHPP---PTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPE 198
+A L++ H P P +D F L SI+ QQL+ + ++ RF L + V PE
Sbjct: 15 MAELVEKHDPYVEPNWDEFER----LCISIINQQLSTASAAAVRERFFELLRDD--VTPE 68
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
TVL + LR +G+S +K Y+ + AR +Q + + + + + LT + GIG
Sbjct: 69 TVLEAEDEALRSVGLSRQKIEYVRNAARAFQKRDYTREGLADHTNDEVIDALTEIKGIGE 128
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLY--SLEELPRPSQMDQLCEKWRPYRSVAS 316
W+ M+++F L RPDVLP+ DL VR+G++ LY EEL R +QM ++ E WRPYRSVA+
Sbjct: 129 WTARMYLLFVLERPDVLPLGDLAVRRGIEQLYGNGDEELTR-AQMREIAEAWRPYRSVAT 187
Query: 317 WYLW 320
Y+W
Sbjct: 188 RYIW 191
>gi|420252648|ref|ZP_14755751.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Burkholderia sp. BT03]
gi|398054155|gb|EJL46291.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Burkholderia sp. BT03]
Length = 349
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 108/197 (54%), Gaps = 5/197 (2%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P S PF+ L RS++ QQ++ + S++ R +A
Sbjct: 151 DKACADLVKRDRILKKLIPKFGPVHLSSRADPFVTLARSVVGQQISVASAQSMWQRIVAA 210
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C +VP+ ++ L L GVS RKA Y+ DLA + +G L +M+D+ +
Sbjct: 211 C---PKLVPQQIIKLGQDDLMNCGVSKRKAEYIFDLAHHFVSGALHVGKWTSMEDEDVIA 267
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV-QLLYSLEELPRPSQMDQLCEK 307
LT + GI W+ MF+IF L RPDVLP++D + + Q +S E + R S+ ++
Sbjct: 268 ELTQIRGISRWTAEMFLIFDLSRPDVLPLDDPNLIHAISQNYFSGEPVTR-SEAREVAAN 326
Query: 308 WRPYRSVASWYLWRFVE 324
W P+R+VA+WY+WR ++
Sbjct: 327 WEPWRTVATWYMWRSLD 343
>gi|319787735|ref|YP_004147210.1| HhH-GPD family protein [Pseudoxanthomonas suwonensis 11-1]
gi|317466247|gb|ADV27979.1| HhH-GPD family protein [Pseudoxanthomonas suwonensis 11-1]
Length = 226
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 114/211 (54%), Gaps = 6/211 (2%)
Query: 127 EVEAAIRHLRNADRQLASLID-IHPPP---TFDSFHTPFLALTRSILYQQLAFKAGTSIY 182
+V+AA HL DR+L S + I P P + S P AL R+ILYQQL+ KA ++I
Sbjct: 9 DVQAAWDHLVRRDRRLGSWMRRIGPLPPEAGWRSSFDPVDALARAILYQQLSGKAASTIV 68
Query: 183 TRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNG-ILSDSAIVNM 241
R A G + + +T+ + LR GVSG K L DLA + G I + M
Sbjct: 69 GRVEAAIGSKR-LHHDTLSRVDDATLRACGVSGNKTLALRDLAAREARGEIPGLRRMSYM 127
Query: 242 DDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQM 301
D + L + GIG W+V M ++F L RPDVLP++DLGVR+G QL+ LE P P+ +
Sbjct: 128 DPDQIVEALVPIRGIGRWTVEMMLMFRLGRPDVLPVDDLGVRRGAQLVDGLEVPPTPTVL 187
Query: 302 DQLCEKWRPYRSVASWYLWRFVEAKGAPSSA 332
W PYR+ AS YLWR + G +A
Sbjct: 188 AARGHAWGPYRTYASLYLWRIADGAGGDVTA 218
>gi|350632038|gb|EHA20406.1| 3-methyladenine DNA glycosidase [Aspergillus niger ATCC 1015]
Length = 294
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/222 (36%), Positives = 114/222 (51%), Gaps = 17/222 (7%)
Query: 120 RPLSSEGEV-EAAIRHLRNADRQLASLIDIHPPPTFDSFH-----TPFLALTRSILYQQL 173
RP ++ G + E A HL D +L SLI P P F PF +L SI+ QQ+
Sbjct: 65 RPTATTGTLLEKAAAHLIATDPRLESLIREQPCPLFTPEGLAEEIDPFRSLVSSIIGQQV 124
Query: 174 AFKAGTSIYTRFIALCG----GEAGV------VPETVLALTPQQLRQIGVSGRKASYLHD 223
+ A SI +F+AL E G PE ++ + LR G+S RKA Y+H
Sbjct: 125 SGAAAKSIKDKFVALFKTNNKDEDGTRPSFFPTPEEIIKMDISTLRTAGLSQRKAEYIHG 184
Query: 224 LARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVR 283
L+ K+ NG LS ++N D+ L LT V G+G WSV MF F+L R DV DLGV+
Sbjct: 185 LSEKFANGELSARMLLNASDEELVEKLTAVRGLGKWSVEMFACFALKRIDVFSTGDLGVQ 244
Query: 284 KGVQLLYSLEELPRPSQ-MDQLCEKWRPYRSVASWYLWRFVE 324
+G + + P + M +L K+ PYRS+ WY+WR +
Sbjct: 245 RGCAVFVGKDFKYMPEKDMLELAAKFAPYRSLFMWYMWRVTD 286
>gi|186476147|ref|YP_001857617.1| HhH-GPD family protein [Burkholderia phymatum STM815]
gi|184192606|gb|ACC70571.1| HhH-GPD family protein [Burkholderia phymatum STM815]
Length = 340
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 130/255 (50%), Gaps = 19/255 (7%)
Query: 71 IRKLSPDNGVDQASSSQPTESSKATSAKSTKSRAIQQQQQTLTVPRIIARPLSSEGEVEA 130
+R+L+ D A ++P +A A + + A+Q Q P + RP +
Sbjct: 98 LRELAHD-----AQEAEPVRKPRAAVAPAESADAVQAAQ-----PSGVTRP----AYWDK 143
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A L DR L LI P S PF+ L RS++ QQ++ + +++ R +A C
Sbjct: 144 ACADLVKRDRILKKLIPKFGPVHLSSRADPFVTLARSVIGQQISVASAQAMWQRIVAAC- 202
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
+ P+ ++ L L GVS RKA Y+ DLA + +G L +M+D+ + L
Sbjct: 203 --PKLAPQQIIKLGQDDLMGCGVSKRKAEYILDLAHHFVSGALHVGKWTSMEDEDVIAEL 260
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV-QLLYSLEELPRPSQMDQLCEKWR 309
T + GI W+ MF+IF L RPDVLP++D + + Q +S E + R S+ ++ W
Sbjct: 261 TQIRGISRWTAEMFLIFDLSRPDVLPLDDPNLIHAISQNYFSGEPVTR-SEAREVAANWE 319
Query: 310 PYRSVASWYLWRFVE 324
P+R+VA+WY+WR ++
Sbjct: 320 PWRTVATWYMWRSLD 334
>gi|148927672|ref|ZP_01811125.1| DNA-3-methyladenine glycosylase II [candidate division TM7
genomosp. GTL1]
gi|147886984|gb|EDK72499.1| DNA-3-methyladenine glycosylase II [candidate division TM7
genomosp. GTL1]
Length = 239
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 108/184 (58%), Gaps = 8/184 (4%)
Query: 139 DRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPE 198
D +L +LI P F L RSI+ QQ++ A +I R A G E P+
Sbjct: 51 DTKLGALIAAQAPLNRLRKGDYFANLVRSIISQQVSVAASRAILARVQAATGLE----PK 106
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKY--QNGILSDSAIVNMDDKSLFTMLTMVNGI 256
+LAL P++LR +G+S KA Y+ DLA + + GI + + D + T LT + GI
Sbjct: 107 RILALNPEELRALGLSRPKAGYISDLAEHFVREPGIFDH--LERLADDEVITELTRIKGI 164
Query: 257 GSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVAS 316
G+W+ MF++F+L R D+ +D+G+++ + LY L+E+P +Q++ L E WRPYR+VAS
Sbjct: 165 GAWTAQMFLMFTLGRLDIFAPDDVGLQRAITRLYGLKEVPSRTQLEALAEAWRPYRTVAS 224
Query: 317 WYLW 320
W+LW
Sbjct: 225 WHLW 228
>gi|448622832|ref|ZP_21669481.1| DNA-3-methyladenine glycosylase [Haloferax denitrificans ATCC
35960]
gi|445753340|gb|EMA04757.1| DNA-3-methyladenine glycosylase [Haloferax denitrificans ATCC
35960]
Length = 193
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 108/195 (55%), Gaps = 7/195 (3%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A R LR AD L +++ H P + D PF L SI+ QQL+ A +I R
Sbjct: 5 AYRELR-ADPHLGDVVEEHGPLSLDPADDPFERLVVSIVNQQLSTTAAATIRDRLF---- 59
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
V PE +LA LR G+S +K Y+ ++A +++G LS ++ M+D + L
Sbjct: 60 DRVEVTPEGILAADEAVLRDCGLSNQKVGYVRNVAEAFRDG-LSAESLRAMNDDEVVAAL 118
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLE-ELPRPSQMDQLCEKWR 309
T + G+G W+ MF+IF L R DV P+ DLG+R+G++ ++ E + +M + E+W
Sbjct: 119 TEIRGVGDWTAKMFLIFVLAREDVFPVEDLGIRRGMEHVFGFERDAVSRGEMRERAERWA 178
Query: 310 PYRSVASWYLWRFVE 324
PYRS AS YLWR V+
Sbjct: 179 PYRSYASRYLWRCVD 193
>gi|256419901|ref|YP_003120554.1| HhH-GPD family protein [Chitinophaga pinensis DSM 2588]
gi|256034809|gb|ACU58353.1| HhH-GPD family protein [Chitinophaga pinensis DSM 2588]
Length = 206
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 117/201 (58%), Gaps = 6/201 (2%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
E + HL + D++LA ++ P P + L L SI+ QQL+ K T IYTRF+AL
Sbjct: 6 EVHLVHL-SKDKKLAGIM-TEPLPALNVQKNIALKLIGSIMSQQLSVKVATVIYTRFLAL 63
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
G+ + +L P+ LR IG+S K SY+H++AR L+D ++ MDD+ +
Sbjct: 64 YDGKEPN-AQQILDTPPETLRSIGLSNAKVSYVHNVARFTVEEKLTDKKLLQMDDEEVIK 122
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPS---QMDQLC 305
LT + G+G W+V M ++F L R DV I+DLG+++ + LY L+ + + ++ ++
Sbjct: 123 YLTQIKGVGRWTVEMLLMFYLCREDVFAIDDLGLQQAMIKLYKLDNTDKKAFREKLLKIS 182
Query: 306 EKWRPYRSVASWYLWRFVEAK 326
+KW PYR+ AS YLW + + K
Sbjct: 183 KKWSPYRTYASRYLWAWKDMK 203
>gi|448427753|ref|ZP_21584028.1| HhH-GPD family protein [Halorubrum terrestre JCM 10247]
gi|445677647|gb|ELZ30146.1| HhH-GPD family protein [Halorubrum terrestre JCM 10247]
Length = 198
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 107/182 (58%), Gaps = 6/182 (3%)
Query: 142 LASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVL 201
+A+L+D H P F L SI+ QQL+ + +I RF+ + GGE P+ VL
Sbjct: 15 MAALVDRHGPLDVAPADDEFGRLCTSIVNQQLSTASANAIRERFLDVLGGEP--TPDRVL 72
Query: 202 ALTPQQLRQIGVSGRKASYLHDLARKYQNG--ILSDSAIVNMDDKSLFTMLTMVNGIGSW 259
A LR+ G+SG K YL ++A +++ + + + D+++ LT + G+G W
Sbjct: 73 AADEDALREAGLSGTKVEYLRNVATAFRDDERDFTREGLAGVSDEAVADRLTEIRGVGEW 132
Query: 260 SVHMFMIFSLHRPDVLPINDLGVRKGVQLLY-SLEELPRPSQMDQLCEKWRPYRSVASWY 318
+ MF+IF+L R DVLP+ DL VRKG++ +Y S EEL R ++M ++ E WRPYRS + Y
Sbjct: 133 TARMFLIFALGREDVLPLGDLAVRKGIEQVYHSGEELSR-AEMREIGEAWRPYRSYGTRY 191
Query: 319 LW 320
+W
Sbjct: 192 IW 193
>gi|145589044|ref|YP_001155641.1| HhH-GPD family protein [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145047450|gb|ABP34077.1| HhH-GPD family protein [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 218
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 111/196 (56%), Gaps = 2/196 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
E A L DR L LI + + F L R+I+ QQ++ A +++ R L
Sbjct: 19 EQACGELMKHDRILKKLIPKYGSGFLVTRGDAFTTLARAIVGQQISVAAAQAVWDR--VL 76
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
+ V P+ +L LT ++LR G+SGRK Y+ DLA + +G L S +MDD+S+
Sbjct: 77 TASKKKVNPKNILELTVEELRAAGLSGRKVEYIRDLADHFASGRLHASQWKDMDDESVIK 136
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
L+ + G+G W+ MF+IF++ RP++LP++D+G+ K + L Y E + ++ W
Sbjct: 137 ELSSIRGVGRWTAEMFLIFNMVRPNILPLDDVGLIKAISLNYFSGEPVSRHEAREVAANW 196
Query: 309 RPYRSVASWYLWRFVE 324
P+R+VA+WY+WR ++
Sbjct: 197 APWRTVATWYMWRSID 212
>gi|344167042|emb|CCA79233.1| putative DNA-3-methyladenine glycosylase II [blood disease
bacterium R229]
Length = 300
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 108/192 (56%), Gaps = 5/192 (2%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A L DR L +I P S PF+ L RSI+ QQ++ KA S++ R + C
Sbjct: 105 ACADLMKRDRILRKIIPAFGPAHLASRGDPFVTLARSIVGQQISVKAAQSVWERLVEAC- 163
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
+VP L ++L G+S RKA Y+ DLA ++NG + + M+D+ + L
Sbjct: 164 --PKLVPAQFLRAGHEKLAGCGLSKRKAEYILDLAEHFRNGTVHVAKWAEMEDEDVIAEL 221
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV-QLLYSLEELPRPSQMDQLCEKWR 309
T + GI W+ MF++F+L RP+VLP++D+G+ + Q +S E + R S+ ++ W
Sbjct: 222 TQIRGIVRWTAEMFLMFNLLRPNVLPLDDIGLINAISQNYFSGEPVTR-SEAREVAANWE 280
Query: 310 PYRSVASWYLWR 321
P+R+VA+WY+WR
Sbjct: 281 PWRTVATWYMWR 292
>gi|347818557|ref|ZP_08871991.1| HhH-GPD family protein [Verminephrobacter aporrectodeae subsp.
tuberculatae At4]
Length = 217
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 105/196 (53%), Gaps = 3/196 (1%)
Query: 126 GEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRF 185
G A +HL DR + LI + F L RSI+ QQ++ KA +++ RF
Sbjct: 16 GYWAEACKHLMKKDRVMKRLISQSGDVALQTRGDAFTTLARSIVGQQISVKAAQTVWERF 75
Query: 186 IALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKS 245
AL + P +VL L + +R G+S RK YL LA ++ G + V MDD++
Sbjct: 76 AALL---RSMQPASVLGLRAEDMRAAGLSARKVDYLLALALHFEQGRVHVQDWVAMDDEA 132
Query: 246 LFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLC 305
+ L + GIG W+ MF+IF L RP+VLP++D+G+ G+ Y + S ++
Sbjct: 133 IIAELVAIRGIGRWTAEMFLIFHLMRPNVLPLDDVGLLNGISRSYFSGDPVSRSDAREVA 192
Query: 306 EKWRPYRSVASWYLWR 321
E WRP+ SVA+WY+WR
Sbjct: 193 EAWRPWCSVATWYIWR 208
>gi|118577030|ref|YP_876773.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Cenarchaeum symbiosum A]
gi|118195551|gb|ABK78469.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Cenarchaeum symbiosum A]
Length = 187
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 106/182 (58%), Gaps = 6/182 (3%)
Query: 141 QLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETV 200
+L L+ + P + H AL RSI+ QQL+ A +SI RF AL GG G
Sbjct: 3 RLIRLVGEYNPRRTRNRHE---ALVRSIITQQLSGSAASSILARFRALYGG--GFPRPAD 57
Query: 201 LALTP-QQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSW 259
+A TP ++L+Q G+S KA Y+ L+ L + M D+ + L V G+G W
Sbjct: 58 VARTPARKLQQAGISAMKADYIRGLSGMIDRRELKLAGFSRMGDEEVVAELVRVRGVGRW 117
Query: 260 SVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYL 319
+ MF+IF+L R DVLP+ DLG+RKGV L S++ LP +++ + E+WRPYR+ A+WYL
Sbjct: 118 TAEMFLIFALGRQDVLPLGDLGLRKGVMKLCSMDSLPTDAEIVKTAERWRPYRTAATWYL 177
Query: 320 WR 321
W+
Sbjct: 178 WK 179
>gi|448318534|ref|ZP_21508053.1| HhH-GPD family protein [Natronococcus jeotgali DSM 18795]
gi|445598795|gb|ELY52846.1| HhH-GPD family protein [Natronococcus jeotgali DSM 18795]
Length = 182
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 110/180 (61%), Gaps = 5/180 (2%)
Query: 142 LASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVL 201
+A L+D H P + T + L SI+ QQ++ + +I R + GGE V PETVL
Sbjct: 1 MAELVDRHDPYVEPDW-TEYERLCISIINQQVSTASAAAIRGRVFDVLGGE--VTPETVL 57
Query: 202 ALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSV 261
A + L + G+S K Y+ + AR +++G + + + ++++ LT + G+G W+
Sbjct: 58 AADEEALYEAGLSRSKIEYVRNAARAFRDGDYTRAGLAEYSNEAVIDRLTEIRGVGDWTA 117
Query: 262 HMFMIFSLHRPDVLPINDLGVRKGVQLLY-SLEELPRPSQMDQLCEKWRPYRSVASWYLW 320
M+++F L RPDVLP+ DL VR+G++ LY + +EL R ++M ++ E WRPYRSVA+ Y+W
Sbjct: 118 RMYLLFVLERPDVLPLGDLAVRRGIENLYGNGDELAR-AEMREIAEDWRPYRSVATRYIW 176
>gi|430804838|ref|ZP_19431953.1| DNA-3-methyladenine glycosylase [Cupriavidus sp. HMR-1]
gi|429502965|gb|ELA01268.1| DNA-3-methyladenine glycosylase [Cupriavidus sp. HMR-1]
Length = 219
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 97/164 (59%), Gaps = 1/164 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R+I YQQL KAG +I R +AL G + PE +LA P+ R G S K +
Sbjct: 53 PYEALVRAIAYQQLHAKAGDAILGRLLALYPGVSFPAPEQLLASAPELQRACGFSAEKLA 112
Query: 220 YLHDLARKYQNGILSD-SAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ +G++ + + D L LT + G+G W+V MF+I+SL R DVLP++
Sbjct: 113 TIRRIAQATVDGVVPNLEEARRLPDTVLIERLTSLRGVGRWTVEMFLIYSLERSDVLPVD 172
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRF 322
D GVR+G L LE+ P QM ++ E W P+R+VA+WYLW
Sbjct: 173 DFGVREGYGRLKGLEKAHTPRQMREIGEAWSPFRTVAAWYLWHL 216
>gi|448602349|ref|ZP_21656405.1| DNA-3-methyladenine glycosylase [Haloferax sulfurifontis ATCC
BAA-897]
gi|445747864|gb|ELZ99318.1| DNA-3-methyladenine glycosylase [Haloferax sulfurifontis ATCC
BAA-897]
Length = 193
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 108/195 (55%), Gaps = 7/195 (3%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A R LR AD L +++ H P + D PF L SI+ QQL+ A +I R
Sbjct: 5 AYRELR-ADPHLGDVVEEHGPLSLDPADDPFERLVVSIVNQQLSTTAAATIRDRLF---- 59
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
V PE +LA LR G+S +K Y+ ++A +++G LS ++ M+D + L
Sbjct: 60 DRVEVTPEGILAADEAVLRDCGLSNQKVGYVRNVADAFRDG-LSAESLRAMNDDEVVAAL 118
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLE-ELPRPSQMDQLCEKWR 309
T + G+G W+ MF+IF L R DV P+ DLG+R+G++ ++ E + +M + E+W
Sbjct: 119 TEIRGVGDWTAKMFLIFVLAREDVFPVEDLGIRRGMEHVFGFERDAVSRGEMRERAERWA 178
Query: 310 PYRSVASWYLWRFVE 324
PYRS AS YLWR V+
Sbjct: 179 PYRSYASRYLWRCVD 193
>gi|126439834|ref|YP_001059570.1| base excision DNA repair protein [Burkholderia pseudomallei 668]
gi|126219327|gb|ABN82833.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
pseudomallei 668]
Length = 312
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 107/196 (54%), Gaps = 3/196 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P F+ L RS++ QQ++ A S++ +
Sbjct: 114 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVWVKIETA 173
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C + P ++ L ++L G+S RK+ Y+ DLAR + +G L +MDD+ +
Sbjct: 174 C---PKLAPPQIIKLGQEKLIACGLSKRKSEYILDLARHFVSGALHVDKWASMDDEDVIA 230
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GIG W+ MF+IF+L RPDVLP++DLG+ + + + Y E S+ ++ W
Sbjct: 231 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 290
Query: 309 RPYRSVASWYLWRFVE 324
P+R+VA+WY+WR ++
Sbjct: 291 EPWRTVATWYMWRSLD 306
>gi|390568855|ref|ZP_10249147.1| HhH-GPD family protein [Burkholderia terrae BS001]
gi|389939204|gb|EIN01041.1| HhH-GPD family protein [Burkholderia terrae BS001]
Length = 316
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 108/197 (54%), Gaps = 5/197 (2%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P S PF+ L RS++ QQ++ + S++ R +A
Sbjct: 118 DKACADLVKRDRILKKLIPKFGPVHLSSRADPFVTLARSVVGQQISVASAQSMWQRIVAA 177
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C +VP+ ++ L L GVS RKA Y+ DLA + +G L +M+D+ +
Sbjct: 178 C---PKLVPQQIIKLGQDDLMNCGVSKRKAEYIFDLAHHFVSGALHVGKWTSMEDEDVIA 234
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV-QLLYSLEELPRPSQMDQLCEK 307
LT + GI W+ MF+IF L RPDVLP++D + + Q +S E + R S+ ++
Sbjct: 235 ELTQIRGISRWTAEMFLIFDLSRPDVLPLDDPNLIHAISQNYFSGEPVTR-SEAREVAAN 293
Query: 308 WRPYRSVASWYLWRFVE 324
W P+R+VA+WY+WR ++
Sbjct: 294 WEPWRTVATWYMWRSLD 310
>gi|187478706|ref|YP_786730.1| DNA-3-methyladenine glycosylase [Bordetella avium 197N]
gi|115423292|emb|CAJ49825.1| DNA-3-methyladenine glycosylase [Bordetella avium 197N]
Length = 208
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 109/195 (55%), Gaps = 5/195 (2%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSF--HTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
A R L + D A L+ P ++ P+ AL R+I YQQL KAG +I R AL
Sbjct: 9 ASRFLASLDEDWARLVCTVGPCRLETRPDREPYEALLRAIAYQQLHAKAGDAILLRLQAL 68
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGIL-SDSAIVNMDDKSLF 247
G P +LA P+ LR G S K + + +A+ +G++ + + +DD+SL
Sbjct: 69 AG--CFPRPAQLLATKPELLRACGFSAAKLATVRGIAQAALDGLVPTREEALRLDDESLI 126
Query: 248 TMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEK 307
L + G+G W+V M +I++L RPD+LP +D GVR+G + L L + P P M ++ +
Sbjct: 127 ERLVTLKGVGRWTVEMLLIYTLERPDILPADDFGVREGYRRLKRLAQAPTPRAMREIGQD 186
Query: 308 WRPYRSVASWYLWRF 322
W+P+R+ A+WYLWR
Sbjct: 187 WQPWRTAATWYLWRM 201
>gi|354599034|ref|ZP_09017051.1| DNA-3-methyladenine glycosylase II [Brenneria sp. EniD312]
gi|353676969|gb|EHD23002.1| DNA-3-methyladenine glycosylase II [Brenneria sp. EniD312]
Length = 243
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 97/165 (58%), Gaps = 3/165 (1%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPET--VLALTPQQLRQIGVSGRK 217
P+ AL R++ YQQL KAG S+ R + L P + + + LRQ G S RK
Sbjct: 61 PYEALIRAVAYQQLTAKAGDSMIARLLRLHQYMEQTFPSAAQIAGCSNETLRQCGFSARK 120
Query: 218 ASYLHDLARKYQNGIL-SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLP 276
A L +A+ NG + + + MDD+ L L + GIG W+V MF+I+SL R D++P
Sbjct: 121 AETLRAIAQGALNGTVPTLEQALTMDDEILIERLCALKGIGRWTVEMFLIYSLERTDIMP 180
Query: 277 INDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
++DLG+++G++ +Y L E P + +L RPYR+VASWYLWR
Sbjct: 181 LDDLGIKQGLRYVYRLRETPTRRALHELSHSCRPYRTVASWYLWR 225
>gi|91788725|ref|YP_549677.1| HhH-GPD [Polaromonas sp. JS666]
gi|91697950|gb|ABE44779.1| HhH-GPD [Polaromonas sp. JS666]
Length = 231
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 104/192 (54%), Gaps = 5/192 (2%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A RHL DR + LI + F L RSI+ QQ++ KA S++T+F AL
Sbjct: 31 ACRHLVKKDRVMKRLIPQFGDACLHARGDAFSTLARSIVGQQISVKAAQSVWTKFSAL-- 88
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
+ P VL L +R G+S RK YL DL+ + G + MDD+++ L
Sbjct: 89 -PKKITPANVLRLKVNDMRAAGLSARKVEYLVDLSIHFDTGTVHVKDWQAMDDEAIIAEL 147
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV-QLLYSLEELPRPSQMDQLCEKWR 309
+ GIG W+ MF+IF L RP+VLP++DLG+ G+ Q +S E + R S ++ W
Sbjct: 148 VAIRGIGRWTAEMFLIFYLMRPNVLPLDDLGLINGISQNYFSGESVSR-SDAREVAAAWA 206
Query: 310 PYRSVASWYLWR 321
PY SVA+WY+WR
Sbjct: 207 PYCSVATWYIWR 218
>gi|170723639|ref|YP_001751327.1| DNA-3-methyladenine glycosylase II [Pseudomonas putida W619]
gi|169761642|gb|ACA74958.1| DNA-3-methyladenine glycosylase II [Pseudomonas putida W619]
Length = 208
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 63/163 (38%), Positives = 96/163 (58%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R+I YQQL +A +I R +AL + P +L + P+ +R G S K +
Sbjct: 45 PYEALVRAIAYQQLHARAAEAILGRLLALFPDDGFPAPRQLLEVAPETMRTCGFSASKLA 104
Query: 220 YLHDLARKYQNGIL-SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+H +A+ +G + + M D++L L + G+G W+V M +I+SL R DVLP++
Sbjct: 105 TIHGIAQAALDGAVPCREEALGMSDEALIERLVALRGVGRWTVEMLLIYSLERSDVLPVD 164
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D VR+G + L L + P P+QM L WRP+R+VA+WYLWR
Sbjct: 165 DFAVREGYRRLKGLGKAPTPAQMRSLGAGWRPHRTVAAWYLWR 207
>gi|212528646|ref|XP_002144480.1| DNA-3-methyladenine glycosylase, putative [Talaromyces marneffei
ATCC 18224]
gi|210073878|gb|EEA27965.1| DNA-3-methyladenine glycosylase, putative [Talaromyces marneffei
ATCC 18224]
Length = 389
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 116/238 (48%), Gaps = 33/238 (13%)
Query: 120 RPLSSEGEV-EAAIRHLRNADRQLASLIDIH-----PPPTFDSFHTPFLALTRSILYQQL 173
RP+++ G + E A+ HL + D +L +ID H P + PF +L SI+ QQ+
Sbjct: 145 RPIATTGTLLEKALEHLVSVDARLKPVIDQHHCHLFSPEGLEEKIDPFDSLVSSIIGQQV 204
Query: 174 AFKAGTSIYTRFIALCGGEAGVVPETV-------LALTPQQ--------LRQIGVSGRKA 218
+ A SI +F+ L E+ +P L TP Q LR G+S RKA
Sbjct: 205 SGAAARSIKNKFLDLFDNESDDMPAATDVTKTKRLFPTPAQVAKLDIPTLRTAGLSQRKA 264
Query: 219 SYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
Y+ LA K+ NG LS ++ D+ + ML V G+G WSV MF F+L R DV
Sbjct: 265 EYIQGLAEKFANGELSTQKLLRASDEDVMEMLIAVRGLGRWSVEMFSCFALKRTDVFSTG 324
Query: 279 DLGVRKGVQLLYSLE------------ELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
DLGV++G + + S M +L EK+RPYRS+ WY+WR E
Sbjct: 325 DLGVQRGCAAFVGRDVNKLKAKGGGKFKYMSESDMLELAEKFRPYRSLFMWYMWRVEE 382
>gi|238027919|ref|YP_002912150.1| DNA-3-methyladenine glycosylase [Burkholderia glumae BGR1]
gi|237877113|gb|ACR29446.1| DNA-3-methyladenine glycosylase [Burkholderia glumae BGR1]
Length = 303
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 109/196 (55%), Gaps = 3/196 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P PF+ L RS++ QQ++ +++ A
Sbjct: 105 DKACADLVKRDRILKKLIPKFGPAHLVKRGDPFVTLARSVVGQQISVATAQAVWAAIEAA 164
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C + P+ V+ L ++L G+S RK+ Y+ DLA+ + +G L +M+D+++
Sbjct: 165 C---PKLTPQQVIRLGQEKLAACGLSKRKSDYILDLAQHFVSGALHVDKWTSMEDEAVIA 221
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GIG W+ MF+IF+L RPDVLP++DLG+ + + + Y E S+ ++ W
Sbjct: 222 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISINYFSGEPVTRSEAREVAANW 281
Query: 309 RPYRSVASWYLWRFVE 324
P+R+VA+WY+WR ++
Sbjct: 282 EPWRTVATWYMWRSLD 297
>gi|253995509|ref|YP_003047573.1| DNA-3-methyladenine glycosylase II [Methylotenera mobilis JLW8]
gi|253982188|gb|ACT47046.1| DNA-3-methyladenine glycosylase II [Methylotenera mobilis JLW8]
Length = 202
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 109/196 (55%), Gaps = 5/196 (2%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTF--DSFHTPFLALTRSILYQQLAFKAGTSIYTRFI 186
+AA LR D A LID F S P+ AL R++ YQQL+ KAG +I + I
Sbjct: 6 QAAQDFLRAIDNDWAQLIDQVGTCKFTTKSERDPYEALVRAVAYQQLSTKAGDAILKKLI 65
Query: 187 ALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIV-NMDDKS 245
G P +L T +LR +G SGRK L +A +G++ A+ NM +++
Sbjct: 66 NHYGHFPA--PPQLLTTTFDELRAVGFSGRKIETLQGIASAALSGLVPTQALTDNMSNET 123
Query: 246 LFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLC 305
L +T + GIG W+V M ++F+L R D+LP +D G+ +G + L LE P+ QM ++
Sbjct: 124 LIQQITTIKGIGQWTVEMMLMFTLARMDILPADDFGIVEGYKRLKKLEVAPKRKQMAEIG 183
Query: 306 EKWRPYRSVASWYLWR 321
W PYR+VASWYLW+
Sbjct: 184 LAWSPYRTVASWYLWQ 199
>gi|226940662|ref|YP_002795736.1| HhH-GPD family protein [Laribacter hongkongensis HLHK9]
gi|226715589|gb|ACO74727.1| HhH-GPD family protein [Laribacter hongkongensis HLHK9]
Length = 208
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 113/192 (58%), Gaps = 3/192 (1%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A L AD +A LI P S PF L R+I+ QQ++ +A +++ R A+
Sbjct: 10 ACAGLAAADPVMARLIASWPDAELVSRGEPFETLLRAIVGQQISVRAADAVWKRLSAVLS 69
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
G+ PE VLAL + LR G+S RK Y DLA + +G ++ +A +DD++L L
Sbjct: 70 GQPS--PERVLALPEEVLRSAGLSARKVLYARDLAECFTDGRVNPAAHAGLDDEALIAEL 127
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRP-SQMDQLCEKWR 309
V GIG W+ M++IF+ RPDV P++D+G+++ + Y+LE+ +Q+ + E++
Sbjct: 128 VAVRGIGRWTAEMYLIFNQLRPDVWPVDDIGLQRAMARHYALEDQKASLTQLRVMGERFA 187
Query: 310 PYRSVASWYLWR 321
P+R+VA+WYLWR
Sbjct: 188 PWRTVATWYLWR 199
>gi|309781389|ref|ZP_07676125.1| DNA-3-methyladenine glycosylase [Ralstonia sp. 5_7_47FAA]
gi|404396949|ref|ZP_10988743.1| hypothetical protein HMPREF0989_00964 [Ralstonia sp. 5_2_56FAA]
gi|308919802|gb|EFP65463.1| DNA-3-methyladenine glycosylase [Ralstonia sp. 5_7_47FAA]
gi|348617077|gb|EGY66558.1| hypothetical protein HMPREF0989_00964 [Ralstonia sp. 5_2_56FAA]
Length = 216
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 95/163 (58%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R+I YQQL KAG +I RFIAL A P+ VLA LR G S K +
Sbjct: 46 PYEALIRAIAYQQLHAKAGDAILGRFIALYPAAAFPAPQQVLATDEAALRACGFSATKLA 105
Query: 220 YLHDLARKYQNGIL-SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ +GI+ + + M D++L L + G+G W+V M +I++L R D+LP +
Sbjct: 106 TIRGIAQAALDGIVPTREQALAMPDEALIERLVTLRGVGRWTVEMLLIYTLERSDILPAD 165
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR G + L L+ P QM+ + W PYR+VA+WYLWR
Sbjct: 166 DFGVRDGYRRLKRLDATPTRKQMETISLAWSPYRTVAAWYLWR 208
>gi|91784174|ref|YP_559380.1| HhH-GPD superfamily base excision DNA repair protein [Burkholderia
xenovorans LB400]
gi|91688128|gb|ABE31328.1| HhH-GPD superfamily base excision DNA repair protein [Burkholderia
xenovorans LB400]
Length = 281
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 109/193 (56%), Gaps = 3/193 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P S PF+ L RS++ QQ++ + + + + A
Sbjct: 83 DKACADLVKRDRILKKLIPKFGPVHLLSRGDPFVTLARSVVGQQISVASAQAAWAKVEAA 142
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C +VP+ + L ++L G+S RKA Y+ DLA+ + +G L +M+D+++
Sbjct: 143 C---PKLVPQQFIKLGLEKLTTCGLSKRKAEYVLDLAQHFVSGALHVGKWTSMEDEAVIA 199
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GIG W+ MF+IF+L RPDVLP++DLG+ + + + Y E S+ ++ W
Sbjct: 200 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 259
Query: 309 RPYRSVASWYLWR 321
P+R+VA+WY+WR
Sbjct: 260 EPWRTVATWYMWR 272
>gi|398856987|ref|ZP_10612697.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM79]
gi|398241955|gb|EJN27590.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM79]
Length = 205
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 98/163 (60%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ +L R+I YQQL KAG +I R ++L PE +LA +Q+R G S K +
Sbjct: 39 PYESLVRAIAYQQLHAKAGDAIVGRLLSLFPSITFPRPEQILATDFEQMRGCGFSASKIA 98
Query: 220 YLHDLARKYQNGILSDSAI-VNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ +G++ D A + MDD++L L + G+G W+V M +I+SL RPD+LP +
Sbjct: 99 TIQGIAQAALDGVVPDYATALAMDDEALIERLITLRGVGRWTVEMLLIYSLERPDILPAD 158
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR+G + L LE P QM ++ W PYR+ A+WYLWR
Sbjct: 159 DFGVREGYRRLKGLEIQPTRKQMIEIGMAWSPYRTAAAWYLWR 201
>gi|448534544|ref|ZP_21621753.1| HhH-GPD family protein [Halorubrum hochstenium ATCC 700873]
gi|445704519|gb|ELZ56433.1| HhH-GPD family protein [Halorubrum hochstenium ATCC 700873]
Length = 201
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 104/182 (57%), Gaps = 6/182 (3%)
Query: 142 LASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVL 201
+A+L+D H P F L SI+ QQL+ + +I RF+ + GGE PE VL
Sbjct: 18 MAALVDRHGPLDVTPADDEFARLCTSIVNQQLSTASAAAIRERFVDVLGGEP--TPEGVL 75
Query: 202 ALTPQQLRQIGVSGRKASYLHDLARKYQNG--ILSDSAIVNMDDKSLFTMLTMVNGIGSW 259
A LR+ G+SG K YL ++A +++ + + D ++ LT + G+G W
Sbjct: 76 AADETALREAGLSGTKVEYLRNVAAAFRDDERAFTREELAGESDATVVDRLTEIRGVGEW 135
Query: 260 SVHMFMIFSLHRPDVLPINDLGVRKGVQLLYS-LEELPRPSQMDQLCEKWRPYRSVASWY 318
+ M++IF+L R DVLP+ DL VRKG++ +Y+ EEL R ++M + E WRPYRS + Y
Sbjct: 136 TARMYLIFALGREDVLPLGDLAVRKGIERVYNDGEELSR-AEMRDIAESWRPYRSYGTRY 194
Query: 319 LW 320
+W
Sbjct: 195 VW 196
>gi|148261618|ref|YP_001235745.1| DNA-3-methyladenine glycosylase II [Acidiphilium cryptum JF-5]
gi|146403299|gb|ABQ31826.1| DNA-3-methyladenine glycosylase II [Acidiphilium cryptum JF-5]
Length = 209
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 99/164 (60%), Gaps = 4/164 (2%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGV-VPETVLALTPQQLRQIGVSGRKA 218
P+ AL ++ +QQL +A ++ R AL EA V P +L+L+ + LR G S KA
Sbjct: 36 PYEALISAVAHQQLHARAAEAMLGRLRALT--EAPVPAPGHLLSLSDEALRGCGFSAAKA 93
Query: 219 SYLHDLARKYQNGIL-SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPI 277
+ L D+AR+ +G + + A M D +L L + GIG W+V M +IF+L RPDV P+
Sbjct: 94 AALRDIARRTLDGTVPTRRAAARMSDAALIERLCTLRGIGRWTVEMLLIFTLGRPDVFPV 153
Query: 278 NDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
+D GVR+G +L++ LE P+P + E + PYRS A+WYLWR
Sbjct: 154 DDFGVREGYRLIHGLEAQPKPRAFSAIGEAYAPYRSTAAWYLWR 197
>gi|448440128|ref|ZP_21588376.1| HhH-GPD family protein [Halorubrum saccharovorum DSM 1137]
gi|445690645|gb|ELZ42855.1| HhH-GPD family protein [Halorubrum saccharovorum DSM 1137]
Length = 198
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 106/182 (58%), Gaps = 6/182 (3%)
Query: 142 LASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVL 201
+A LID H P + F L SI+ QQL+ + +I+ RF+ + GG+ P VL
Sbjct: 15 MARLIDRHGPLAVEPAGDEFSRLCTSIVNQQLSTASAAAIHERFLDVLGGDP--TPNLVL 72
Query: 202 ALTPQQLRQIGVSGRKASYLHDLARKYQNGI--LSDSAIVNMDDKSLFTMLTMVNGIGSW 259
A LR+ G+SG K YL ++A +++G L+ + + D LT + G+G W
Sbjct: 73 AADEDDLREAGLSGTKVEYLREVAAAFRDGDRELTREGLADASDDEAVAALTEIRGVGEW 132
Query: 260 SVHMFMIFSLHRPDVLPINDLGVRKGVQLLYS-LEELPRPSQMDQLCEKWRPYRSVASWY 318
+ M++IF+L R DVLP+ DL VRKG++ +Y+ +EL R ++M ++ + WRPYRS + Y
Sbjct: 133 TARMYLIFALGREDVLPLGDLAVRKGIEQVYNDGDELTR-AEMREIGDAWRPYRSYGTRY 191
Query: 319 LW 320
+W
Sbjct: 192 VW 193
>gi|395010948|ref|ZP_10394252.1| HhH-GPD superfamily base excision DNA repair protein, partial
[Acidovorax sp. CF316]
gi|394310947|gb|EJE48378.1| HhH-GPD superfamily base excision DNA repair protein, partial
[Acidovorax sp. CF316]
Length = 230
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 102/191 (53%), Gaps = 3/191 (1%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A +HL DR + LI + F L RSI+ QQ++ KA +++ RF L
Sbjct: 33 ACKHLMKKDRVMKRLIPQFGDAALQTQGDAFTTLARSIVGQQISVKAAQTVWERFAKL-- 90
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
+ P VL L +R G+S RK YL DLA + G L +MDD+++ L
Sbjct: 91 -PRSMKPANVLKLKVDDMRAAGLSARKVDYLVDLALHFDGGKLHVKDWASMDDEAIIAEL 149
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRP 310
+ GIG W+ MF+IF L RP+VLP++D+G+ G+ Y E S+ ++ E W+P
Sbjct: 150 VAIRGIGRWTAEMFLIFYLMRPNVLPLDDVGLISGISHNYFSGETVSRSEAREVAEAWKP 209
Query: 311 YRSVASWYLWR 321
+ SVA+WY+WR
Sbjct: 210 WASVATWYIWR 220
>gi|448485460|ref|ZP_21606685.1| HhH-GPD family protein [Halorubrum arcis JCM 13916]
gi|445818114|gb|EMA67981.1| HhH-GPD family protein [Halorubrum arcis JCM 13916]
Length = 198
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 108/182 (59%), Gaps = 6/182 (3%)
Query: 142 LASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVL 201
+A+L+D H P F L SI+ QQL+ + +I RF+ + GG+ P+ VL
Sbjct: 15 MAALVDRHGPLDVAPADDEFGRLCTSIVNQQLSTASANAIRERFLDVLGGDP--TPDRVL 72
Query: 202 ALTPQQLRQIGVSGRKASYLHDLARKYQNG--ILSDSAIVNMDDKSLFTMLTMVNGIGSW 259
A LR+ G+SG K YL ++A +++ + + + D+++ LT + G+G W
Sbjct: 73 AADEDALREAGLSGTKVEYLRNVATAFRDDERDFTREGLAGVSDEAVADRLTEIRGVGEW 132
Query: 260 SVHMFMIFSLHRPDVLPINDLGVRKGVQLLY-SLEELPRPSQMDQLCEKWRPYRSVASWY 318
+ MF+IF+L R DVLP+ DL VRKG++ +Y S EEL R ++M ++ E WRPYRS ++ Y
Sbjct: 133 TARMFLIFALGREDVLPLGDLAVRKGIEQVYHSGEELSR-AEMREIGEAWRPYRSYSTRY 191
Query: 319 LW 320
+W
Sbjct: 192 IW 193
>gi|448453445|ref|ZP_21593788.1| HhH-GPD family protein [Halorubrum litoreum JCM 13561]
gi|445807245|gb|EMA57330.1| HhH-GPD family protein [Halorubrum litoreum JCM 13561]
Length = 198
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 107/182 (58%), Gaps = 6/182 (3%)
Query: 142 LASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVL 201
+A+L+D H P F L SI+ QQL+ + +I RF+ + GGE P+ VL
Sbjct: 15 MAALVDRHGPLDVAPADDEFGRLCTSIVNQQLSTASANAIRERFLDVLGGEP--TPDRVL 72
Query: 202 ALTPQQLRQIGVSGRKASYLHDLARKYQNG--ILSDSAIVNMDDKSLFTMLTMVNGIGSW 259
A LR+ G+SG K YL ++A +++ + + + D+++ LT + G+G W
Sbjct: 73 AADEDALREPGLSGTKVEYLRNVATAFRDDERDFTREGLAGVSDEAVADRLTEIRGVGEW 132
Query: 260 SVHMFMIFSLHRPDVLPINDLGVRKGVQLLY-SLEELPRPSQMDQLCEKWRPYRSVASWY 318
+ MF+IF+L R DVLP+ DL VRKG++ +Y S EEL R ++M ++ E WRPYRS + Y
Sbjct: 133 TARMFLIFALGREDVLPLGDLAVRKGIEQVYHSGEELSR-AEMREIGEAWRPYRSYGTRY 191
Query: 319 LW 320
+W
Sbjct: 192 IW 193
>gi|121611835|ref|YP_999642.1| HhH-GPD family protein [Verminephrobacter eiseniae EF01-2]
gi|121556475|gb|ABM60624.1| HhH-GPD family protein [Verminephrobacter eiseniae EF01-2]
Length = 234
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 109/205 (53%), Gaps = 3/205 (1%)
Query: 120 RPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGT 179
RP + G A + L DR + LI T + F L RSI+ QQ++ KA
Sbjct: 27 RPDARPGYWAEACKQLMKKDRVMKRLIPQSGNATLQTRGDAFTTLARSIVGQQISVKAAQ 86
Query: 180 SIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIV 239
+++ RF L + P VL L +R G+S RK YL DL+ +++G L
Sbjct: 87 TVWERFALL---PCSMKPANVLKLRIDDMRAAGLSARKVDYLVDLSMHFESGQLHVKDWA 143
Query: 240 NMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPS 299
MDD+++ L + GIG W+ MF+IF L RP+VLP++DLG+ G+ L Y + S
Sbjct: 144 AMDDEAIIAELIAIRGIGRWTAEMFLIFYLMRPNVLPLDDLGLINGISLNYFSGDPVSRS 203
Query: 300 QMDQLCEKWRPYRSVASWYLWRFVE 324
++ + W+P+ SVA+WY+WR ++
Sbjct: 204 DAREVAQAWKPWCSVATWYIWRSLD 228
>gi|448304826|ref|ZP_21494762.1| HhH-GPD family protein [Natronorubrum sulfidifaciens JCM 14089]
gi|445590207|gb|ELY44428.1| HhH-GPD family protein [Natronorubrum sulfidifaciens JCM 14089]
Length = 201
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 104/184 (56%), Gaps = 2/184 (1%)
Query: 142 LASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVL 201
+A++ID P D + L SI+ QQL+ + ++ R + GGE V PE VL
Sbjct: 20 MAAVIDRREPHPLDPNPDEYERLCVSIINQQLSTASAAAVRERVFDVLGGE--VTPEAVL 77
Query: 202 ALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSV 261
A + LR G+S K Y+ + AR +Q L+ + + ++ + LT + G+G W+
Sbjct: 78 AASRDDLRDAGLSRTKVDYVENAARAFQERDLTREGLADHTNEDVRRELTRIKGVGDWTA 137
Query: 262 HMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
M+++F L RPDVLP+ DL VR+G++ LY+ E ++M + + WRPYRS+AS Y+W
Sbjct: 138 RMYLMFVLQRPDVLPLGDLAVRRGIEHLYNDGEALSRAEMRAIADPWRPYRSLASRYIWA 197
Query: 322 FVEA 325
EA
Sbjct: 198 EYEA 201
>gi|167837112|ref|ZP_02463995.1| DNA-3-methyladenine glycosylase [Burkholderia thailandensis MSMB43]
Length = 262
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 104/193 (53%), Gaps = 3/193 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P F+ L RS++ QQ++ A S++ +
Sbjct: 64 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVWVKIETA 123
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C + P ++ L ++L G+S RK+ Y+ DLAR + +G L MDD+ +
Sbjct: 124 C---PKLAPPQIIKLGQEKLIACGLSKRKSEYILDLARHFVSGALHVDKWATMDDEGVIA 180
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GIG W+ MF+IF+L RPDVLP++DLG+ + + + Y E S+ ++ W
Sbjct: 181 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 240
Query: 309 RPYRSVASWYLWR 321
P+R+VA+WY+WR
Sbjct: 241 EPWRTVATWYMWR 253
>gi|326405108|ref|YP_004285190.1| DNA-3-methyladenine glycosylase II [Acidiphilium multivorum AIU301]
gi|325051970|dbj|BAJ82308.1| DNA-3-methyladenine glycosylase II [Acidiphilium multivorum AIU301]
Length = 209
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 99/164 (60%), Gaps = 4/164 (2%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGV-VPETVLALTPQQLRQIGVSGRKA 218
P+ AL ++ +QQL +A ++ R AL EA V P +L+L+ + LR G S KA
Sbjct: 36 PYEALISAVAHQQLHARAAEAMLGRLRALT--EAPVPAPGHLLSLSDEALRGCGFSAAKA 93
Query: 219 SYLHDLARKYQNGIL-SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPI 277
+ L D+AR+ +G + + A M D +L L + GIG W+V M +IF+L RPDV P+
Sbjct: 94 AALRDIARRTLDGTVPTRRAAARMSDAALIERLCTLRGIGRWTVEMLLIFTLGRPDVFPV 153
Query: 278 NDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
+D GVR+G +L++ LE P+P + E + PYRS A+WYLWR
Sbjct: 154 DDFGVREGYRLIHGLEAQPKPRAFAAIGEAYAPYRSTAAWYLWR 197
>gi|241664019|ref|YP_002982379.1| DNA-3-methyladenine glycosylase II [Ralstonia pickettii 12D]
gi|240866046|gb|ACS63707.1| DNA-3-methyladenine glycosylase II [Ralstonia pickettii 12D]
Length = 216
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 95/163 (58%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R+I YQQL KAG +I RF+AL A P+ VLA LR G S K +
Sbjct: 46 PYEALIRAIAYQQLHAKAGDAILGRFLALYPAAAFPAPQQVLATDEAALRACGFSATKLA 105
Query: 220 YLHDLARKYQNGIL-SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ +GI+ + + M D++L L + G+G W+V M +I++L R D+LP +
Sbjct: 106 TIRGIAQAALDGIVPTREQALAMPDEALIERLVTLRGVGRWTVEMLLIYTLERSDILPAD 165
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR G + L L+ P QM+ + W PYR+VA+WYLWR
Sbjct: 166 DFGVRDGYRRLKQLDATPTRKQMETISLAWSPYRTVAAWYLWR 208
>gi|389872885|ref|YP_006380304.1| DNA-3-methyladenine glycosylase [Advenella kashmirensis WT001]
gi|388538134|gb|AFK63322.1| DNA-3-methyladenine glycosylase [Advenella kashmirensis WT001]
Length = 216
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 104/193 (53%), Gaps = 2/193 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A+ L DR L +I +P + T F+ L R+I+ QQ++ K + F L
Sbjct: 24 DEAVTFLIKKDRILRKIIPANPDLWLATNKTAFVTLARAIIGQQISSKTADLHWKNFTQL 83
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
CG P TVL Q R+ G+S RK Y+ DLA + ++ MDD+ + T
Sbjct: 84 CGHRPS--PATVLEYNEAQWREAGLSKRKTEYILDLANHFNERKVNPLKWSKMDDEDIIT 141
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
L + GI W+ MF+IF+LHRPD+LPI+D G+ K + Y E ++ ++ + W
Sbjct: 142 ELCAIRGISRWTAEMFLIFNLHRPDILPIDDPGLLKAISEHYFSGEPVSRYEVREVAQSW 201
Query: 309 RPYRSVASWYLWR 321
+P+R+VA+WYLWR
Sbjct: 202 QPWRTVATWYLWR 214
>gi|424903637|ref|ZP_18327150.1| DNA-3-methyladenine glycosylase [Burkholderia thailandensis MSMB43]
gi|390931510|gb|EIP88911.1| DNA-3-methyladenine glycosylase [Burkholderia thailandensis MSMB43]
Length = 283
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 106/196 (54%), Gaps = 3/196 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P F+ L RS++ QQ++ A S++ +
Sbjct: 85 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVWVKIETA 144
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C + P ++ L ++L G+S RK+ Y+ DLAR + +G L MDD+ +
Sbjct: 145 C---PKLAPPQIIKLGQEKLIACGLSKRKSEYILDLARHFVSGALHVDKWATMDDEGVIA 201
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GIG W+ MF+IF+L RPDVLP++DLG+ + + + Y E S+ ++ W
Sbjct: 202 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 261
Query: 309 RPYRSVASWYLWRFVE 324
P+R+VA+WY+WR ++
Sbjct: 262 EPWRTVATWYMWRSLD 277
>gi|410418984|ref|YP_006899433.1| DNA-3-methyladenine glycosylase 1 [Bordetella bronchiseptica MO149]
gi|427820750|ref|ZP_18987813.1| DNA-3-methyladenine glycosylase 1 [Bordetella bronchiseptica D445]
gi|408446279|emb|CCJ57947.1| DNA-3-methyladenine glycosylase 1 [Bordetella bronchiseptica MO149]
gi|410571750|emb|CCN19992.1| DNA-3-methyladenine glycosylase 1 [Bordetella bronchiseptica D445]
Length = 219
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 94/163 (57%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R+I YQQL +AG +I R +AL G A P +LA P LR G S K
Sbjct: 45 PYEALVRAIAYQQLHARAGDAIVGRLLALFPGGAFPAPGQLLAADPAALRACGFSAAKTQ 104
Query: 220 YLHDLARKYQNGILSDS-AIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ ++G++ D A M D++L LT + G+G W+V M +I++L R D+LP +
Sbjct: 105 TILGIAQAARDGVVPDRRAARRMSDQALVERLTTLRGVGRWTVEMLLIYTLARADILPAD 164
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR G + L P QM + + W PYR++A+WYLWR
Sbjct: 165 DFGVRDGYRRLKGAAATPTARQMRDIGQAWGPYRTLAAWYLWR 207
>gi|33595698|ref|NP_883341.1| DNA-3-methyladenine glycosylase 1 [Bordetella parapertussis 12822]
gi|33565777|emb|CAE36321.1| DNA-3-methyladenine glycosylase 1 [Bordetella parapertussis]
Length = 219
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 94/163 (57%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R+I YQQL +AG +I R +AL G A P +LA P LR G S K
Sbjct: 45 PYEALVRAIAYQQLHARAGDAIVGRLLALFPGGAFPAPGQLLAADPAALRACGFSAAKTQ 104
Query: 220 YLHDLARKYQNGILSDS-AIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ ++G++ D A M D++L LT + G+G W+V M +I++L R D+LP +
Sbjct: 105 TILGIAQAARDGVVPDRRAARRMSDQALVERLTTLRGVGRWTVEMLLIYTLARADILPAD 164
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR G + L P QM + + W PYR++A+WYLWR
Sbjct: 165 DFGVRDGYRRLKGAAATPTARQMRNIGQAWGPYRTLAAWYLWR 207
>gi|406994058|gb|EKE13122.1| hypothetical protein ACD_13C00093G0036 [uncultured bacterium]
Length = 198
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 110/188 (58%), Gaps = 5/188 (2%)
Query: 139 DRQLASLIDIHPPPTFDSFHTP--FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV 196
D+ +A LI T T F L SI+ QQL+ +A ++I+ R LC G+ +
Sbjct: 12 DKYIAVLIQKWGSCTIKKSLTSKYFEDLLESIVNQQLSGRAASTIFGRVKDLCDGD--IN 69
Query: 197 PETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGI 256
P+ +L L+ ++LR+ G+S K Y+ DLA + ++G L + ++D+ + L +V GI
Sbjct: 70 PDIILKLSEEKLRKAGLSFAKIRYIKDLAGRTKSGELDLRKLDRLNDEEVIEKLVVVKGI 129
Query: 257 GSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVAS 316
G W+ MF++FSL RPDV PI+DLG+RKG + + ++ R + W P+R+VAS
Sbjct: 130 GRWTAEMFLMFSLARPDVFPIDDLGIRKGFEKVTG-KKFDRVKSARFALKSWAPFRTVAS 188
Query: 317 WYLWRFVE 324
WYLWR +E
Sbjct: 189 WYLWRSLE 196
>gi|303276907|ref|XP_003057747.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460404|gb|EEH57698.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 178
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 96/174 (55%), Gaps = 14/174 (8%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGE---AGVVPETVLALTPQQLRQIGVSGRK 217
F +L R+I++QQL A +I+ R + G E + PE + LR G+S RK
Sbjct: 1 FRSLARAIVFQQLNGAAAATIFGRVRSAVGAEDDETAMTPEAFARAKDEDLRACGLSARK 60
Query: 218 ASYLHDLARKYQNGI-----------LSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMI 266
YL LA ++ +G L+D A+ M D+ L + GIG WSVHMF +
Sbjct: 61 LEYLRGLAARFSSGDDDDDDDGRRPALTDDALEAMSDEKTTATLLELKGIGEWSVHMFQM 120
Query: 267 FSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLW 320
F L+RPDVLP+ D GVR+G+ + Y L + P+ +M ++ W PY+++AS Y+W
Sbjct: 121 FYLNRPDVLPVKDFGVRQGMMIAYGLRDPPKEEKMREIAASWAPYKTLASMYMW 174
>gi|398811677|ref|ZP_10570467.1| HhH-GPD superfamily base excision DNA repair protein [Variovorax
sp. CF313]
gi|398079925|gb|EJL70759.1| HhH-GPD superfamily base excision DNA repair protein [Variovorax
sp. CF313]
Length = 216
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 103/193 (53%), Gaps = 3/193 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
E A +HL DR + LI +S F L RS++ QQ++ KA S++ +F AL
Sbjct: 18 EEACKHLSRKDRVMKRLIPKFGDACLESRGDAFTTLARSVVGQQISVKAAQSVWDKFAAL 77
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
+ P VL L +R G+S RK YL DLA + +G++ A +M D+ +
Sbjct: 78 ---PRKLTPANVLKLKVDDMRGAGLSARKIEYLVDLALHFDSGMVHVDAWKDMSDELIIE 134
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
L + GIG W+ MF+IF L RP+VLP++DLG+ G+ + Y + S + W
Sbjct: 135 ELVAIRGIGRWTAEMFLIFHLMRPNVLPVDDLGLLNGISVNYFSGDPVSRSDARDVAVAW 194
Query: 309 RPYRSVASWYLWR 321
PY SVA+WY+WR
Sbjct: 195 APYCSVATWYIWR 207
>gi|448465818|ref|ZP_21598938.1| HhH-GPD family protein [Halorubrum kocurii JCM 14978]
gi|445814885|gb|EMA64839.1| HhH-GPD family protein [Halorubrum kocurii JCM 14978]
Length = 198
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 108/182 (59%), Gaps = 6/182 (3%)
Query: 142 LASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVL 201
+A LID H P T + F L SI+ QQL+ + +I+ RF+ + G + P+ VL
Sbjct: 15 MARLIDRHGPLTVEPAGDEFARLCTSIVNQQLSTASAAAIHERFVDVLGADP--TPDLVL 72
Query: 202 ALTPQQLRQIGVSGRKASYLHDLARKYQNGI--LSDSAIVNMDDKSLFTMLTMVNGIGSW 259
A LR G+SG K YL ++A +++G L+ + + D+++ LT + G+G W
Sbjct: 73 AADEGALRGAGLSGTKVEYLRNVAAAFRDGDRDLTRQGLADAGDEAVVDALTEIRGVGEW 132
Query: 260 SVHMFMIFSLHRPDVLPINDLGVRKGVQLLYS-LEELPRPSQMDQLCEKWRPYRSVASWY 318
+ M++IF+L R DVLP DL VRKG++ +Y+ +EL R ++M ++ E WRPYRS + Y
Sbjct: 133 TARMYLIFALGREDVLPPGDLAVRKGIERVYNDGDELTR-AEMREIGEAWRPYRSYGTRY 191
Query: 319 LW 320
+W
Sbjct: 192 VW 193
>gi|448344028|ref|ZP_21532944.1| HhH-GPD family protein [Natrinema gari JCM 14663]
gi|445621742|gb|ELY75211.1| HhH-GPD family protein [Natrinema gari JCM 14663]
Length = 196
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 106/180 (58%), Gaps = 5/180 (2%)
Query: 142 LASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVL 201
+A L+D H P + T + L SI+ QQL+ + ++ R + G V PE+VL
Sbjct: 15 MAGLLDRHDPYVEPDW-TEYERLCISIINQQLSTASAAAVRERVFEVLEG--AVTPESVL 71
Query: 202 ALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSV 261
A LR G+S RK Y+ + AR +Q S + + + + + +LT + GIG+W+
Sbjct: 72 AADEAALRDAGLSRRKVEYMRNAARAFQENDYSQAGLASRSNAEVVDLLTEIKGIGTWTA 131
Query: 262 HMFMIFSLHRPDVLPINDLGVRKGVQLLYS-LEELPRPSQMDQLCEKWRPYRSVASWYLW 320
M+++F L RPDVLP+ DL VR+G++ LY+ +EL R ++M ++ E WRPYRS A+ Y+W
Sbjct: 132 RMYLLFVLERPDVLPLGDLAVRRGIEALYADGDELTR-AEMREIAEPWRPYRSAATRYIW 190
>gi|448334183|ref|ZP_21523362.1| HhH-GPD family protein [Natrinema pellirubrum DSM 15624]
gi|445620340|gb|ELY73842.1| HhH-GPD family protein [Natrinema pellirubrum DSM 15624]
Length = 196
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 109/187 (58%), Gaps = 11/187 (5%)
Query: 138 ADRQLASLIDIHPP---PTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAG 194
AD +A L+D H P P + + L SI+ QQL+ + ++ R + GE
Sbjct: 11 ADPVMAGLLDRHDPYVEPDWSEYER----LCISIINQQLSTASAAAVRERVFEVLDGE-- 64
Query: 195 VVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVN 254
V PE+VLA + +R G+ RK Y+ + AR ++ S + + + D + +LT +
Sbjct: 65 VTPESVLAADDEAIRDAGLFRRKIEYVRNAARAFRENDYSRTGLASHSDGEVVDLLTEIT 124
Query: 255 GIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSL-EELPRPSQMDQLCEKWRPYRS 313
GIG W+ M+++F L RPDVLP+ DL VR+G++ LY+ EEL R ++M ++ E WRPYRS
Sbjct: 125 GIGEWTARMYLLFVLERPDVLPLGDLAVRRGIEQLYADGEELTR-AEMREIAEPWRPYRS 183
Query: 314 VASWYLW 320
VA+ Y+W
Sbjct: 184 VATRYIW 190
>gi|448398363|ref|ZP_21570012.1| HhH-GPD family protein [Haloterrigena limicola JCM 13563]
gi|445671378|gb|ELZ23966.1| HhH-GPD family protein [Haloterrigena limicola JCM 13563]
Length = 197
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 108/185 (58%), Gaps = 4/185 (2%)
Query: 142 LASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVL 201
LA++ID H + F L SI+ QQL+ + ++ R + G V PE+VL
Sbjct: 16 LAAVIDRHDLHPLEPVENEFERLCVSIINQQLSTASAAAVRERVFDILDG--VVTPESVL 73
Query: 202 ALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSV 261
+ LR+ G+S K Y+ + AR ++ L+ +V ++ + LT + GIG W+
Sbjct: 74 DASRDALREAGLSRTKVDYVENAARAFRERDLTRGGLVEHANEEVIADLTEITGIGEWTA 133
Query: 262 HMFMIFSLHRPDVLPINDLGVRKGVQLLYSL-EELPRPSQMDQLCEKWRPYRSVASWYLW 320
+M++IF L RPDVLP+ DL VR+G++ LY+ +ELPR S+M ++ E WRP+RS A+ Y+W
Sbjct: 134 NMYLIFVLERPDVLPLGDLAVRRGIEQLYNDGDELPR-SEMREIAEPWRPHRSTATRYIW 192
Query: 321 RFVEA 325
EA
Sbjct: 193 AEYEA 197
>gi|365087918|ref|ZP_09327676.1| HhH-GPD family protein [Acidovorax sp. NO-1]
gi|363417354|gb|EHL24435.1| HhH-GPD family protein [Acidovorax sp. NO-1]
Length = 223
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 107/192 (55%), Gaps = 5/192 (2%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A +HL DR + LI + F L RSI+ QQ++ KA +++ RF AL
Sbjct: 27 ACKHLVKKDRVMKRLIPQFGDAALQTRGDAFTTLARSIVGQQVSVKAAQTVWERFAAL-- 84
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
+ P +VL L +R G+S RK YL DLA ++ G L MDD+++ L
Sbjct: 85 -PRSMKPASVLKLKIDDMRAAGLSARKVDYLVDLAMHFEGGKLHVKDWAAMDDEAIIAEL 143
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV-QLLYSLEELPRPSQMDQLCEKWR 309
+ GIG W+ MF+IF + RP+VLP++D+G+ G+ Q +S + + R S ++ E W+
Sbjct: 144 VAIRGIGRWTAEMFLIFYMMRPNVLPLDDVGLINGISQNYFSGDPVSR-SDAREVAEAWK 202
Query: 310 PYRSVASWYLWR 321
P+ SVA+WY+WR
Sbjct: 203 PWCSVATWYIWR 214
>gi|433591844|ref|YP_007281340.1| HhH-GPD superfamily base excision DNA repair protein [Natrinema
pellirubrum DSM 15624]
gi|433306624|gb|AGB32436.1| HhH-GPD superfamily base excision DNA repair protein [Natrinema
pellirubrum DSM 15624]
Length = 209
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 109/187 (58%), Gaps = 11/187 (5%)
Query: 138 ADRQLASLIDIHPP---PTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAG 194
AD +A L+D H P P + + L SI+ QQL+ + ++ R + GE
Sbjct: 24 ADPVMAGLLDRHDPYVEPDWSEYER----LCISIINQQLSTASAAAVRERVFEVLDGE-- 77
Query: 195 VVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVN 254
V PE+VLA + +R G+ RK Y+ + AR ++ S + + + D + +LT +
Sbjct: 78 VTPESVLAADDEAIRDAGLFRRKIEYVRNAARAFRENDYSRTGLASHSDGEVVDLLTEIT 137
Query: 255 GIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYS-LEELPRPSQMDQLCEKWRPYRS 313
GIG W+ M+++F L RPDVLP+ DL VR+G++ LY+ EEL R ++M ++ E WRPYRS
Sbjct: 138 GIGEWTARMYLLFVLERPDVLPLGDLAVRRGIEQLYADGEELTR-AEMREIAEPWRPYRS 196
Query: 314 VASWYLW 320
VA+ Y+W
Sbjct: 197 VATRYIW 203
>gi|237812905|ref|YP_002897356.1| DNA-3-methyladenine glycosylase [Burkholderia pseudomallei MSHR346]
gi|237505833|gb|ACQ98151.1| DNA-3-methyladenine glycosylase [Burkholderia pseudomallei MSHR346]
Length = 312
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 107/196 (54%), Gaps = 3/196 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P F+ L RS++ QQ++ A S++ +
Sbjct: 114 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVWVKIETA 173
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C + P ++ L ++L G+S RK+ Y+ DLA+ + +G L +MDD+ +
Sbjct: 174 C---PKLAPPQIIKLGQEKLIACGLSKRKSEYILDLAQHFVSGALHVDKWASMDDEDVIA 230
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GIG W+ MF+IF+L RPDVLP++DLG+ + + + Y E S+ ++ W
Sbjct: 231 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 290
Query: 309 RPYRSVASWYLWRFVE 324
P+R+VA+WY+WR ++
Sbjct: 291 EPWRTVATWYMWRSLD 306
>gi|121600175|ref|YP_993470.1| DNA-3-methyladenine glycosylase [Burkholderia mallei SAVP1]
gi|126450820|ref|YP_001080978.1| base excision DNA repair protein [Burkholderia mallei NCTC 10247]
gi|126455439|ref|YP_001066848.1| base excision DNA repair protein [Burkholderia pseudomallei 1106a]
gi|134277779|ref|ZP_01764494.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
pseudomallei 305]
gi|242314280|ref|ZP_04813296.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
pseudomallei 1106b]
gi|251767522|ref|ZP_02267590.2| base excision DNA repair protein, HhH-GPD family [Burkholderia
mallei PRL-20]
gi|254197719|ref|ZP_04904141.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
pseudomallei S13]
gi|254297084|ref|ZP_04964537.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
pseudomallei 406e]
gi|386861245|ref|YP_006274194.1| base excision DNA repair protein [Burkholderia pseudomallei 1026b]
gi|418382653|ref|ZP_12966591.1| base excision DNA repair protein [Burkholderia pseudomallei 354a]
gi|418538403|ref|ZP_13104012.1| base excision DNA repair protein [Burkholderia pseudomallei 1026a]
gi|418540457|ref|ZP_13105996.1| base excision DNA repair protein [Burkholderia pseudomallei 1258a]
gi|418546706|ref|ZP_13111903.1| base excision DNA repair protein [Burkholderia pseudomallei 1258b]
gi|418552949|ref|ZP_13117792.1| base excision DNA repair protein [Burkholderia pseudomallei 354e]
gi|121228985|gb|ABM51503.1| DNA-3-methyladenine glycosylase [Burkholderia mallei SAVP1]
gi|126229081|gb|ABN92621.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
pseudomallei 1106a]
gi|126243690|gb|ABO06783.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
mallei NCTC 10247]
gi|134251429|gb|EBA51508.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
pseudomallei 305]
gi|157806761|gb|EDO83931.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
pseudomallei 406e]
gi|169654460|gb|EDS87153.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
pseudomallei S13]
gi|242137519|gb|EES23921.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
pseudomallei 1106b]
gi|243062483|gb|EES44669.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
mallei PRL-20]
gi|261825992|gb|ABN02400.2| base excision DNA repair protein, HhH-GPD family [Burkholderia
mallei NCTC 10229]
gi|385347689|gb|EIF54339.1| base excision DNA repair protein [Burkholderia pseudomallei 1026a]
gi|385361809|gb|EIF67681.1| base excision DNA repair protein [Burkholderia pseudomallei 1258a]
gi|385363465|gb|EIF69239.1| base excision DNA repair protein [Burkholderia pseudomallei 1258b]
gi|385372358|gb|EIF77476.1| base excision DNA repair protein [Burkholderia pseudomallei 354e]
gi|385377133|gb|EIF81749.1| base excision DNA repair protein [Burkholderia pseudomallei 354a]
gi|385658373|gb|AFI65796.1| base excision DNA repair protein [Burkholderia pseudomallei 1026b]
Length = 312
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 107/196 (54%), Gaps = 3/196 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P F+ L RS++ QQ++ A S++ +
Sbjct: 114 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVWVKIETA 173
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C + P ++ L ++L G+S RK+ Y+ DLA+ + +G L +MDD+ +
Sbjct: 174 C---PKLAPPQIIKLGQEKLIACGLSKRKSEYILDLAQHFVSGALHVDKWASMDDEDVIA 230
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GIG W+ MF+IF+L RPDVLP++DLG+ + + + Y E S+ ++ W
Sbjct: 231 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 290
Query: 309 RPYRSVASWYLWRFVE 324
P+R+VA+WY+WR ++
Sbjct: 291 EPWRTVATWYMWRSLD 306
>gi|53719851|ref|YP_108837.1| HhH-GPD superfamily base excision DNA repair protein [Burkholderia
pseudomallei K96243]
gi|76810257|ref|YP_334066.1| base excision DNA repair protein [Burkholderia pseudomallei 1710b]
gi|217420824|ref|ZP_03452329.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
pseudomallei 576]
gi|226198847|ref|ZP_03794410.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
pseudomallei Pakistan 9]
gi|254259512|ref|ZP_04950566.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
pseudomallei 1710a]
gi|52210265|emb|CAH36244.1| HhH-GPD superfamily base excision DNA repair protein [Burkholderia
pseudomallei K96243]
gi|76579710|gb|ABA49185.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
pseudomallei 1710b]
gi|217396236|gb|EEC36253.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
pseudomallei 576]
gi|225928947|gb|EEH24971.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
pseudomallei Pakistan 9]
gi|254218201|gb|EET07585.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
pseudomallei 1710a]
Length = 312
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 107/196 (54%), Gaps = 3/196 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P F+ L RS++ QQ++ A S++ +
Sbjct: 114 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVWVKIETA 173
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C + P ++ L ++L G+S RK+ Y+ DLA+ + +G L +MDD+ +
Sbjct: 174 C---PKLAPPQIIKLGQEKLIACGLSKRKSEYILDLAQHFVSGALHVDKWASMDDEDVIA 230
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GIG W+ MF+IF+L RPDVLP++DLG+ + + + Y E S+ ++ W
Sbjct: 231 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 290
Query: 309 RPYRSVASWYLWRFVE 324
P+R+VA+WY+WR ++
Sbjct: 291 EPWRTVATWYMWRSLD 306
>gi|375149252|ref|YP_005011693.1| DNA-3-methyladenine glycosylase II [Niastella koreensis GR20-10]
gi|361063298|gb|AEW02290.1| DNA-3-methyladenine glycosylase II [Niastella koreensis GR20-10]
Length = 205
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 105/192 (54%), Gaps = 5/192 (2%)
Query: 134 HLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEA 193
HL + DR + LID H T L SI+ QQL+ K IY RF+ L GG
Sbjct: 6 HL-SKDRIIKKLIDNHGILTLKKQKNICTYLCASIMSQQLSTKVADVIYQRFLNLYGGNE 64
Query: 194 GVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMV 253
PE V+A P+ LR IG+S K SY+ ++AR + S + M+D+ + T LT +
Sbjct: 65 PT-PEQVVATAPETLRAIGLSNAKVSYVQNVARFAIEHGMEHSRLHKMNDEQVITYLTQI 123
Query: 254 NGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRP---SQMDQLCEKWRP 310
G+G W+V M +IF+L R DV ++DLGV+ + LY L+ + M ++ +KW P
Sbjct: 124 KGVGRWTVEMLLIFALKREDVFALDDLGVQNAMIALYKLDRTDKKRFREDMVRISKKWSP 183
Query: 311 YRSVASWYLWRF 322
YR+ A YLWR+
Sbjct: 184 YRTYACMYLWRW 195
>gi|374309131|ref|YP_005055561.1| HhH-GPD family protein [Granulicella mallensis MP5ACTX8]
gi|358751141|gb|AEU34531.1| HhH-GPD family protein [Granulicella mallensis MP5ACTX8]
Length = 238
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 111/206 (53%), Gaps = 16/206 (7%)
Query: 135 LRNADRQLASLIDIHPPPT--FDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGE 192
L AD +LA LI P T + +PF ALT+SI+YQQL KA +I+ R +A
Sbjct: 23 LSAADPKLAKLIAKAGPFTVRLPAQQSPFEALTQSIIYQQLHGKAAATIHARLLASFADA 82
Query: 193 AGV----VPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSA-IVNMDDKSLF 247
G+ P+ +L +QLR G+S KA L DLA K +G + A I M D +
Sbjct: 83 CGIGNHPEPQDLLDCPNEQLRAAGLSHNKALALRDLAAKTLDGTVPTIARIRRMSDDDII 142
Query: 248 TMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLY---------SLEELPRP 298
LT V GIG W+V M +IF L RP+VLP +D G+RKG L Y + + L
Sbjct: 143 EHLTQVRGIGKWTVEMMLIFRLGRPNVLPSSDYGIRKGFALTYLGLKPTEKVTPDLLATH 202
Query: 299 SQMDQLCEKWRPYRSVASWYLWRFVE 324
Q+ + +KW P+ SVASWY+WR +
Sbjct: 203 EQIAKRAKKWAPWCSVASWYMWRACD 228
>gi|167570472|ref|ZP_02363346.1| DNA-3-methyladenine glycosylase [Burkholderia oklahomensis C6786]
Length = 283
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 113/213 (53%), Gaps = 7/213 (3%)
Query: 112 LTVPRIIARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQ 171
LT ++ARP + A L DR L LI P F+ L RS++ Q
Sbjct: 72 LTDAEMVARP----PYWDKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQ 127
Query: 172 QLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNG 231
Q++ A S++ + C + P V+ L ++L G+S RK+ Y+ DLA+ + +G
Sbjct: 128 QISVAAAQSVWVKIETAC---PKLAPPQVIKLGQEKLIACGLSKRKSEYILDLAQHFVSG 184
Query: 232 ILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYS 291
L MDD+ + LT + GIG W+ MF+IF+L RPDVLP++DLG+ + + + Y
Sbjct: 185 ALHVDKWATMDDEDVIAELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYF 244
Query: 292 LEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
E S+ ++ W P+R+VA+WY+WR ++
Sbjct: 245 SGEPVTRSEAREVAANWEPWRTVATWYMWRSLD 277
>gi|83719392|ref|YP_442472.1| DNA-3-methyladenine glycosylase [Burkholderia thailandensis E264]
gi|257138680|ref|ZP_05586942.1| DNA-3-methyladenine glycosylase [Burkholderia thailandensis E264]
gi|83653217|gb|ABC37280.1| DNA-3-methyladenine glycosylase [Burkholderia thailandensis E264]
Length = 312
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 107/196 (54%), Gaps = 3/196 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P F+ L RS++ QQ++ A S++ +
Sbjct: 114 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVWVKIETA 173
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C + P ++ L ++L G+S RK+ Y+ DLA+ + +G L +MDD+ +
Sbjct: 174 C---PKLAPPQIIKLGQEKLIACGLSKRKSEYILDLAQHFVSGALHVDKWASMDDEDVIA 230
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GIG W+ MF+IF+L RPDVLP++DLG+ + + + Y E S+ ++ W
Sbjct: 231 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 290
Query: 309 RPYRSVASWYLWRFVE 324
P+R+VA+WY+WR ++
Sbjct: 291 EPWRTVATWYMWRSLD 306
>gi|187929909|ref|YP_001900396.1| DNA-3-methyladenine glycosylase II [Ralstonia pickettii 12J]
gi|187726799|gb|ACD27964.1| DNA-3-methyladenine glycosylase II [Ralstonia pickettii 12J]
Length = 216
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 95/163 (58%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R+I YQQL KAG +I RF+AL A P+ VLA LR G S K +
Sbjct: 46 PYEALIRAIAYQQLHAKAGDAILGRFLALYPAAAFPAPQQVLATEEATLRACGFSAIKLA 105
Query: 220 YLHDLARKYQNGIL-SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ +GI+ + + M D++L L + G+G W+V M +I++L R D+LP +
Sbjct: 106 TIRGIAQAALDGIVPTREQALAMPDEALIERLVTLRGVGRWTVEMLLIYTLERSDILPAD 165
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR G + L L+ P QM+ + W PYR+VA+WYLWR
Sbjct: 166 DFGVRDGYRRLKRLDATPTRKQMETISLAWSPYRTVAAWYLWR 208
>gi|412339531|ref|YP_006968286.1| DNA-3-methyladenine glycosylase 1 [Bordetella bronchiseptica 253]
gi|408769365|emb|CCJ54141.1| DNA-3-methyladenine glycosylase 1 [Bordetella bronchiseptica 253]
Length = 219
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 94/163 (57%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R+I YQQL +AG +I R +AL G A P +LA P LR G S K
Sbjct: 45 PYEALVRAIAYQQLHARAGDAIVGRLLALFPGGAFPAPGQLLAADPAALRACGFSAAKTQ 104
Query: 220 YLHDLARKYQNGILSDS-AIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ ++G++ D A M D++L LT + G+G W+V M +I++L R D+LP +
Sbjct: 105 TILGIAQAARDGVVPDRRAARRMSDQALVERLTTLRGVGRWTVEMLLIYTLARADILPAD 164
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR G + L P QM + + W PYR++A+WYLWR
Sbjct: 165 DFGVRDGYRRLKGGAATPTARQMRDIGQAWGPYRTLAAWYLWR 207
>gi|389683838|ref|ZP_10175169.1| DNA-3-methyladenine glycosylase [Pseudomonas chlororaphis O6]
gi|388552177|gb|EIM15439.1| DNA-3-methyladenine glycosylase [Pseudomonas chlororaphis O6]
Length = 205
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 96/163 (58%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P AL R+I YQQL +AG +I RF+ L G PE +LA +QLR G S K +
Sbjct: 39 PCEALVRAIAYQQLHARAGDAILGRFLGLYGQGTFPSPEQILATDFEQLRACGFSAGKIA 98
Query: 220 YLHDLARKYQNGILSD-SAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A +G + D A MDD++L LT + GIG W+V M +I+SL R D+LP +
Sbjct: 99 TIRGIAEATLSGAVPDYQAARAMDDEALIERLTSLRGIGRWTVEMLLIYSLERLDILPAD 158
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR+G + L LE P QM ++ RP+R+VA+WYLWR
Sbjct: 159 DFGVREGYRRLKGLERQPTRKQMIEIGLSLRPHRTVAAWYLWR 201
>gi|448345063|ref|ZP_21533964.1| HhH-GPD family protein [Natrinema altunense JCM 12890]
gi|445636613|gb|ELY89774.1| HhH-GPD family protein [Natrinema altunense JCM 12890]
Length = 196
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 106/183 (57%), Gaps = 11/183 (6%)
Query: 142 LASLIDIHPP---PTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPE 198
+A L+D H P P + + L SI+ QQL+ + ++ R + E V PE
Sbjct: 15 MAGLLDRHDPYVEPDWSEYER----LCISIINQQLSTASAAAVRERVFEVL--EGAVTPE 68
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
+VLA LR G+SGRK Y+ + AR +Q + + + D ++ +LT + GIG
Sbjct: 69 SVLAADEAALRDAGLSGRKVEYVRNAARAFQENDYTRAGLAGHSDAAVVDLLTEIKGIGE 128
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYS-LEELPRPSQMDQLCEKWRPYRSVASW 317
W+ M+++F L RPDVLP+ DL VR+G++ LY+ +EL R ++M ++ E W+PYRS A+
Sbjct: 129 WTARMYLLFVLERPDVLPLGDLAVRRGIEELYAGGDELTR-AEMREIAEPWQPYRSAATR 187
Query: 318 YLW 320
Y+W
Sbjct: 188 YIW 190
>gi|33600221|ref|NP_887781.1| DNA-3-methyladenine glycosylase 1 [Bordetella bronchiseptica RB50]
gi|410474134|ref|YP_006897415.1| DNA-3-methyladenine glycosylase 1 [Bordetella parapertussis Bpp5]
gi|427813456|ref|ZP_18980520.1| DNA-3-methyladenine glycosylase 1 [Bordetella bronchiseptica 1289]
gi|33567819|emb|CAE31733.1| DNA-3-methyladenine glycosylase 1 [Bordetella bronchiseptica RB50]
gi|408444244|emb|CCJ50966.1| DNA-3-methyladenine glycosylase 1 [Bordetella parapertussis Bpp5]
gi|410564456|emb|CCN22003.1| DNA-3-methyladenine glycosylase 1 [Bordetella bronchiseptica 1289]
Length = 219
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 94/163 (57%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R+I YQQL +AG +I R +AL G A P +LA P LR G S K
Sbjct: 45 PYEALVRAIAYQQLHARAGDAIVGRLLALFPGGAFPAPGQLLAADPAALRACGFSAAKTQ 104
Query: 220 YLHDLARKYQNGILSDS-AIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ ++G++ D A M D++L LT + G+G W+V M +I++L R D+LP +
Sbjct: 105 TILGIAQAARDGVVPDRRAARRMSDQALVERLTTLRGVGRWTVEMLLIYTLARADILPAD 164
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR G + L P QM + + W PYR++A+WYLWR
Sbjct: 165 DFGVRDGYRRLKGGAATPTARQMRDIGQAWGPYRTLAAWYLWR 207
>gi|352684693|ref|YP_004896678.1| hypothetical protein Acin_1315 [Acidaminococcus intestini RyC-MR95]
gi|350279348|gb|AEQ22538.1| hypothetical protein Acin_1315 [Acidaminococcus intestini RyC-MR95]
Length = 219
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 114/193 (59%), Gaps = 6/193 (3%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHT--PFLALTRSILYQQLAFKAGTSIYTRFIAL 188
++++L D++L +I + P T++ HT PF L I+ Q L+ KAG IY RF L
Sbjct: 13 SVQYLCKKDKRLTKVISMVGPITYEP-HTDNPFPFLIHEIIEQMLSIKAGAKIYGRFEEL 71
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C G+ + PE++ L+ ++++ IG S KA+Y+ + A G L + +M D++
Sbjct: 72 CAGQ--ITPESISKLSVEEIKAIGTSTAKANYIKNAASAVLTGELDFTKFPDMTDEAALK 129
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
L + GIG+W+ M++IF L R D+LP D+ + + LY E++ R S +++ C+KW
Sbjct: 130 ELVSLRGIGTWTAKMYLIFVLDRQDILPFEDVAFLQSYKWLYKTEDVSRAS-IEKKCKKW 188
Query: 309 RPYRSVASWYLWR 321
+PY S+A+ +L+R
Sbjct: 189 KPYSSIAARFLYR 201
>gi|448474462|ref|ZP_21602321.1| HhH-GPD family protein [Halorubrum aidingense JCM 13560]
gi|445817769|gb|EMA67638.1| HhH-GPD family protein [Halorubrum aidingense JCM 13560]
Length = 198
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 105/181 (58%), Gaps = 4/181 (2%)
Query: 142 LASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVL 201
+A LID H P + F L SI+ QQL+ + ++I+ R + G V PE++L
Sbjct: 15 MARLIDRHGPLAIEPADDAFARLCTSIVNQQLSTASASAIHGRMVDALDGT--VAPESLL 72
Query: 202 ALTPQQLRQIGVSGRKASYLHDLARKYQNGI--LSDSAIVNMDDKSLFTMLTMVNGIGSW 259
A LR+ G+SG K YL + A +++ L+ + + + DD ++ LT + G+G W
Sbjct: 73 AADEAALRETGLSGTKVEYLRNAAEAFRDDDRDLTRAGLADADDGAVVDRLTEIRGVGEW 132
Query: 260 SVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYL 319
+ M++IF+L R DVLP+ DL VRKG++ +Y+ + ++M ++ + WRPYRS + Y+
Sbjct: 133 TARMYLIFALGREDVLPLGDLAVRKGIEQVYNDGDDLSRAEMREIGDAWRPYRSYGTRYI 192
Query: 320 W 320
W
Sbjct: 193 W 193
>gi|430811413|emb|CCJ31164.1| unnamed protein product [Pneumocystis jirovecii]
Length = 287
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 121/243 (49%), Gaps = 40/243 (16%)
Query: 117 IIARPLSSEGEV---EAAIRHLRNADRQLASLIDIHPPPTFDSFH-----TPFLALTRSI 168
+ +P+ SE + A+ HL+ D + L + P F PF +L R+I
Sbjct: 40 VFLKPIFSETYLTLLSKALDHLKKVDSRFQVLSERFPCKPFSPEGLMEPVNPFQSLCRAI 99
Query: 169 LYQQLAFKAGTSIYTRFIALC-------------------GGEAGV--VPETVLALTPQQ 207
L QQL+ A S+Y +FI L EA + +P+TV ++P+
Sbjct: 100 LSQQLSNSASASVYRKFIKLFFPDETKQPQNRENKSSDSQASEAKIFPMPQTVRDMSPEN 159
Query: 208 LRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIF 267
LR G S +K Y+ LA + +G LS N D+ + LT + GIG WS MF++F
Sbjct: 160 LRLAGCSFKKIEYIKSLANNFLSGDLSAEFFSNTSDEGIMQRLTTIKGIGPWSAEMFLLF 219
Query: 268 SLHRPDVLPINDLGVRKGVQLLYSLEELPRPS----------QMDQLCEKWRPYRSVASW 317
SL R D+L DLG+++G+ L+ + + +P+ +M ++ E WRPYRS+ASW
Sbjct: 220 SLKRTDILSTGDLGIQRGMALMKG-KNISKPNKGKWKYMSYEEMIEMAEPWRPYRSIASW 278
Query: 318 YLW 320
++W
Sbjct: 279 FMW 281
>gi|398991503|ref|ZP_10694632.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Pseudomonas sp. GM24]
gi|399014631|ref|ZP_10716918.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Pseudomonas sp. GM16]
gi|398110387|gb|EJM00292.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Pseudomonas sp. GM16]
gi|398139526|gb|EJM28523.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Pseudomonas sp. GM24]
Length = 209
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 99/163 (60%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ +L R+I YQQL KAG +I R + L G++ PE +LA +++R G S K +
Sbjct: 39 PYESLVRAIAYQQLHAKAGDAIVGRLVGLFPGQSFPRPEQILATDFERMRSCGFSAGKIA 98
Query: 220 YLHDLARKYQNGILSDSAI-VNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ +G++ D A + M D++L L + G+G W+V M +I+SL R D+LP +
Sbjct: 99 TIQGIAQATLDGVVPDYATALAMGDEALIERLVSLRGVGRWTVEMLLIYSLERMDILPAD 158
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR+G + L LE P QM ++ W P+R+VA+WYLWR
Sbjct: 159 DFGVREGYRRLKGLEVQPTRRQMVEIGLAWSPFRTVAAWYLWR 201
>gi|167581387|ref|ZP_02374261.1| DNA-3-methyladenine glycosylase [Burkholderia thailandensis TXDOH]
Length = 312
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 107/196 (54%), Gaps = 3/196 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P F+ L RS++ QQ++ A S++ +
Sbjct: 114 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVWVKIETA 173
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C + P ++ L ++L G+S RK+ Y+ DLA+ + +G L +MDD+ +
Sbjct: 174 C---PKLAPPQIIRLGQEKLIACGLSKRKSEYILDLAQHFVSGALHVDKWASMDDEDVIA 230
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GIG W+ MF+IF+L RPDVLP++DLG+ + + + Y E S+ ++ W
Sbjct: 231 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 290
Query: 309 RPYRSVASWYLWRFVE 324
P+R+VA+WY+WR ++
Sbjct: 291 EPWRTVATWYMWRSLD 306
>gi|254191451|ref|ZP_04897955.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
pseudomallei Pasteur 52237]
gi|403519277|ref|YP_006653411.1| base excision DNA repair protein [Burkholderia pseudomallei BPC006]
gi|157939123|gb|EDO94793.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
pseudomallei Pasteur 52237]
gi|403074920|gb|AFR16500.1| base excision DNA repair protein [Burkholderia pseudomallei BPC006]
Length = 295
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 107/196 (54%), Gaps = 3/196 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P F+ L RS++ QQ++ A S++ +
Sbjct: 97 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVWVKIETA 156
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C + P ++ L ++L G+S RK+ Y+ DLA+ + +G L +MDD+ +
Sbjct: 157 C---PKLAPPQIIKLGQEKLIACGLSKRKSEYILDLAQHFVSGALHVDKWASMDDEDVIA 213
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GIG W+ MF+IF+L RPDVLP++DLG+ + + + Y E S+ ++ W
Sbjct: 214 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 273
Query: 309 RPYRSVASWYLWRFVE 324
P+R+VA+WY+WR ++
Sbjct: 274 EPWRTVATWYMWRSLD 289
>gi|354593794|ref|ZP_09011837.1| putative DNA-3-methyladenine glycosylase [Commensalibacter
intestini A911]
gi|353672905|gb|EHD14601.1| putative DNA-3-methyladenine glycosylase [Commensalibacter
intestini A911]
Length = 219
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 110/203 (54%), Gaps = 8/203 (3%)
Query: 127 EVEAAIRHLRNADRQLASLIDIHPPPTF--DSFHTPFLALTRSILYQQLAFKAGTSIYTR 184
+++ A L N D LA +I P+ AL +I QQL KA T+I R
Sbjct: 7 KIQEATDFLSNIDPDLALVIQKEKNCRLQVKQKQEPYFALLEAIAGQQLHAKAVTAILNR 66
Query: 185 FIALCGGEAGVVPET--VLALTPQQLRQIGVSGRKASYLHDLARKYQNG-ILSDSAIVNM 241
AL G +P T +L T + LR G S RK + + LA Q G + S NM
Sbjct: 67 LKAL---NNGALPSTDKLLTYTDEALRSCGFSFRKIATMQKLAMATQEGNVPSYEQAQNM 123
Query: 242 DDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQM 301
D++L +LT + GIG W+V MF+IF+L R D++P++D G+R+G ++ L E P+P ++
Sbjct: 124 SDEALIELLTQLPGIGVWTVEMFLIFTLGRLDIMPVHDFGIREGWKICKKLSEQPKPKEL 183
Query: 302 DQLCEKWRPYRSVASWYLWRFVE 324
+ W PYRSV +W+LWR V+
Sbjct: 184 KEKTLSWSPYRSVGAWFLWRAVD 206
>gi|167619501|ref|ZP_02388132.1| DNA-3-methyladenine glycosylase [Burkholderia thailandensis Bt4]
Length = 273
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 107/196 (54%), Gaps = 3/196 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P F+ L RS++ QQ++ A S++ +
Sbjct: 75 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVWVKIETA 134
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C + P ++ L ++L G+S RK+ Y+ DLA+ + +G L +MDD+ +
Sbjct: 135 C---PKLAPPQIIKLGQEKLIACGLSKRKSEYILDLAQHFVSGALHVDKWASMDDEDVIA 191
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GIG W+ MF+IF+L RPDVLP++DLG+ + + + Y E S+ ++ W
Sbjct: 192 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 251
Query: 309 RPYRSVASWYLWRFVE 324
P+R+VA+WY+WR ++
Sbjct: 252 EPWRTVATWYMWRSLD 267
>gi|167563300|ref|ZP_02356216.1| DNA-3-methyladenine glycosylase [Burkholderia oklahomensis EO147]
Length = 279
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 104/193 (53%), Gaps = 3/193 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P F+ L RS++ QQ++ A S++ +
Sbjct: 81 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVWVKIETA 140
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C + P V+ L ++L G+S RK+ Y+ DLA+ + +G L MDD+ +
Sbjct: 141 C---PKLAPPQVIKLGQEKLIACGLSKRKSEYILDLAQHFVSGALHVDKWATMDDEDVIA 197
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GIG W+ MF+IF+L RPDVLP++DLG+ + + + Y E S+ ++ W
Sbjct: 198 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 257
Query: 309 RPYRSVASWYLWR 321
P+R+VA+WY+WR
Sbjct: 258 EPWRTVATWYMWR 270
>gi|365854927|ref|ZP_09394990.1| base excision DNA repair protein, HhH-GPD family [Acetobacteraceae
bacterium AT-5844]
gi|363719679|gb|EHM02980.1| base excision DNA repair protein, HhH-GPD family [Acetobacteraceae
bacterium AT-5844]
Length = 224
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 95/163 (58%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R+I +QQ+ +A ++ R IAL G+ P VL L LR G SG K +
Sbjct: 46 PYEALVRAIAHQQVHGRAAEAMLNRMIALFPGQDFPGPTDVLKLEDGALRACGFSGAKVA 105
Query: 220 YLHDLARKYQNGIL-SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ D+A K G++ + A + D+ L L + G+G W+V M +IF+L RPD+LP++
Sbjct: 106 AILDIAHKTAGGLVPTRRAAARLPDEELIERLVALRGVGRWTVEMLLIFTLGRPDILPVD 165
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR+G + L+ P+P ++ + W P+RS A+WYLWR
Sbjct: 166 DFGVREGYRHAAGLDAQPKPKELAAIGAAWAPHRSAAAWYLWR 208
>gi|124385111|ref|YP_001029098.1| DNA-3-methyladenine glycosylase [Burkholderia mallei NCTC 10229]
gi|254178531|ref|ZP_04885186.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
mallei ATCC 10399]
gi|254184418|ref|ZP_04891008.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
pseudomallei 1655]
gi|254200233|ref|ZP_04906599.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
mallei FMH]
gi|254209313|ref|ZP_04915659.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
mallei JHU]
gi|254358018|ref|ZP_04974291.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
mallei 2002721280]
gi|147749829|gb|EDK56903.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
mallei FMH]
gi|147750086|gb|EDK57157.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
mallei JHU]
gi|148027145|gb|EDK85166.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
mallei 2002721280]
gi|160699570|gb|EDP89540.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
mallei ATCC 10399]
gi|184214949|gb|EDU11992.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
pseudomallei 1655]
Length = 295
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 107/196 (54%), Gaps = 3/196 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P F+ L RS++ QQ++ A S++ +
Sbjct: 97 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVWVKIETA 156
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C + P ++ L ++L G+S RK+ Y+ DLA+ + +G L +MDD+ +
Sbjct: 157 C---PKLAPPQIIKLGQEKLIACGLSKRKSEYILDLAQHFVSGALHVDKWASMDDEDVIA 213
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GIG W+ MF+IF+L RPDVLP++DLG+ + + + Y E S+ ++ W
Sbjct: 214 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 273
Query: 309 RPYRSVASWYLWRFVE 324
P+R+VA+WY+WR ++
Sbjct: 274 EPWRTVATWYMWRSLD 289
>gi|448504638|ref|ZP_21613979.1| HhH-GPD family protein [Halorubrum distributum JCM 9100]
gi|448519127|ref|ZP_21617903.1| HhH-GPD family protein [Halorubrum distributum JCM 10118]
gi|445701848|gb|ELZ53820.1| HhH-GPD family protein [Halorubrum distributum JCM 9100]
gi|445704143|gb|ELZ56061.1| HhH-GPD family protein [Halorubrum distributum JCM 10118]
Length = 198
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 107/182 (58%), Gaps = 6/182 (3%)
Query: 142 LASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVL 201
+A+L+D H P F L SI+ QQL+ + +I RF+ + GG+ P+ VL
Sbjct: 15 MAALVDRHGPLDVAPADDEFGRLCTSIVNQQLSTASANAIRERFLDVLGGDP--TPDRVL 72
Query: 202 ALTPQQLRQIGVSGRKASYLHDLARKYQNG--ILSDSAIVNMDDKSLFTMLTMVNGIGSW 259
A LR+ G+SG K YL ++A +++ + + + D+++ LT + G+G W
Sbjct: 73 AAEEDALREAGLSGTKVEYLRNVATAFRDDERDFTREGLAGVSDEAVADRLTEIRGVGEW 132
Query: 260 SVHMFMIFSLHRPDVLPINDLGVRKGVQLLY-SLEELPRPSQMDQLCEKWRPYRSVASWY 318
+ MF+IF+L R DVLP+ DL VRKG++ +Y S E+L R ++M ++ E WRPYRS + Y
Sbjct: 133 TARMFLIFALGREDVLPLGDLAVRKGIEQVYHSGEKLSR-AEMREIGEAWRPYRSYGTRY 191
Query: 319 LW 320
+W
Sbjct: 192 IW 193
>gi|398805222|ref|ZP_10564201.1| HhH-GPD superfamily base excision DNA repair protein [Polaromonas
sp. CF318]
gi|398092003|gb|EJL82425.1| HhH-GPD superfamily base excision DNA repair protein [Polaromonas
sp. CF318]
Length = 241
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 112/207 (54%), Gaps = 16/207 (7%)
Query: 133 RHLRNADRQLASLI----DIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+HL DR + LI D H D+F T L RSI+ QQ++ KA +++ RF AL
Sbjct: 33 KHLVKKDRVMKRLIPQFGDAHLQARGDAFST----LARSIVGQQISVKAAQTVWHRFEAL 88
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
+ P VL L +R G+S RK YL DLA + G + +MDD+++
Sbjct: 89 ---PKKMTPANVLRLKVDDMRAAGLSARKVEYLVDLAINFDAGTVHVKDWQSMDDEAIIA 145
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV-QLLYSLEELPRPSQMDQLCEK 307
L + GIG W+ MF+IF L RP+VLP++D+G+ G+ Q +S E + R S ++
Sbjct: 146 ELVAIRGIGRWTAEMFLIFYLMRPNVLPLDDIGLISGISQNYFSGESVSR-SDAREVAAA 204
Query: 308 WRPYRSVASWYLWRFVE---AKGAPSS 331
W PY SVA+WY+WR ++ GAP
Sbjct: 205 WAPYCSVATWYIWRSLDPLPVLGAPGG 231
>gi|456063199|ref|YP_007502169.1| HhH-GPD family protein [beta proteobacterium CB]
gi|455440496|gb|AGG33434.1| HhH-GPD family protein [beta proteobacterium CB]
Length = 218
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 106/193 (54%), Gaps = 2/193 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
E A L DR L LI H + F L RSI+ QQ++ A S++ + L
Sbjct: 19 EQACAELMKHDRILKKLIPKHGSVFLRTRGDAFTTLARSIVGQQISVAAAQSVWNK--TL 76
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
+ V P+ +LAL+ ++LR G+SGRK Y+ DLA + +G L + M+D+++
Sbjct: 77 LAAKNKVNPKNILALSVEELRAAGLSGRKVEYIRDLAEHFNSGRLHANQWKGMEDEAIIK 136
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
L + GIG W+ MF+IF++ RP++LP++D G+ K + L Y E + ++ W
Sbjct: 137 ELCEIRGIGRWTAEMFLIFNMVRPNILPLDDAGLIKAISLNYFSGEPVSRHEAREVAANW 196
Query: 309 RPYRSVASWYLWR 321
P+ +VA+WY+WR
Sbjct: 197 APWCTVATWYMWR 209
>gi|448308553|ref|ZP_21498430.1| HhH-GPD family protein [Natronorubrum bangense JCM 10635]
gi|445593841|gb|ELY48010.1| HhH-GPD family protein [Natronorubrum bangense JCM 10635]
Length = 201
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 104/184 (56%), Gaps = 2/184 (1%)
Query: 142 LASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVL 201
+A++ID P D + L SI+ QQL+ + ++ R + GGE V PE VL
Sbjct: 20 MAAVIDRREPHPLDPNPDEYERLCVSIINQQLSTASAAAVRERVFDVLGGE--VTPEAVL 77
Query: 202 ALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSV 261
A + LR G+S K Y+ + AR +Q L+ + + ++ + LT + G+G W+
Sbjct: 78 AASRDDLRSAGLSRTKVDYVENAARAFQERDLTREGLADYTNEDVRRELTRIKGVGDWTA 137
Query: 262 HMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
M+++F L RPDVLP+ DL VR+G++ LY+ E ++M + + WRP+RS+AS Y+W
Sbjct: 138 RMYLMFVLQRPDVLPLGDLAVRRGIEQLYNDGEALSRAEMRAIADPWRPHRSLASRYIWA 197
Query: 322 FVEA 325
EA
Sbjct: 198 EYEA 201
>gi|330817520|ref|YP_004361225.1| DNA-3-methyladenine glycosylase [Burkholderia gladioli BSR3]
gi|327369913|gb|AEA61269.1| DNA-3-methyladenine glycosylase [Burkholderia gladioli BSR3]
Length = 302
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 105/186 (56%), Gaps = 3/186 (1%)
Query: 139 DRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPE 198
DR L LI P PF+ L RS++ QQ++ + +++ A C + P+
Sbjct: 114 DRILKKLIPKFGPAHLVKRGDPFVTLARSVVGQQISVSSAQAVWAAIEAAC---PKLAPQ 170
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V+ L ++L G+S RK+ Y+ DLA+ + +G L +M+D+ + LT + GIG
Sbjct: 171 QVIRLGLEKLAACGLSKRKSEYIIDLAQHFVSGALHVDKWTSMEDEDVIAELTQIRGIGR 230
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+ MF+IF+L RPDVLP++D G+ + + + Y E S+ ++ W P+R+VA+WY
Sbjct: 231 WTAEMFLIFNLSRPDVLPLDDPGLIRAISVNYFSGEPVTRSEAREVAANWEPWRTVATWY 290
Query: 319 LWRFVE 324
+WR ++
Sbjct: 291 MWRSLD 296
>gi|271499399|ref|YP_003332424.1| DNA-3-methyladenine glycosylase II [Dickeya dadantii Ech586]
gi|270342954|gb|ACZ75719.1| DNA-3-methyladenine glycosylase II [Dickeya dadantii Ech586]
Length = 228
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 114/197 (57%), Gaps = 5/197 (2%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHT--PFLALTRSILYQQLAFKAGTSIYTRFIAL 188
A+ HL D A LID F+S T P+ AL R++ QQL+ +A +I ++
Sbjct: 13 ALAHLSAIDAHWARLIDGVGHIRFESRPTREPYEALIRAVSSQQLSNRAAAAIISKLQQR 72
Query: 189 CGGEAGVVP--ETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGIL-SDSAIVNMDDKS 245
G P E ++A P+ LRQ G S RK + D+A+ +G++ + +A ++DD +
Sbjct: 73 FDVGDGGFPSAEQLVACEPEVLRQCGFSARKIDTVKDIAQGVLSGLVPARTAAEHLDDDT 132
Query: 246 LFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLC 305
L L + GIG W+V M +I +L R D++P++DLG+++G + LY LE+ P M ++
Sbjct: 133 LIERLCTLKGIGRWTVEMLLISTLERMDIMPVDDLGIKQGFRYLYRLEQDPTRKAMLEMS 192
Query: 306 EKWRPYRSVASWYLWRF 322
E RPYR++A+WYLWR
Sbjct: 193 EPCRPYRTLAAWYLWRI 209
>gi|145256689|ref|XP_001401486.1| DNA-3-methyladenine glycosylase [Aspergillus niger CBS 513.88]
gi|134058393|emb|CAK38578.1| unnamed protein product [Aspergillus niger]
Length = 412
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 114/234 (48%), Gaps = 30/234 (12%)
Query: 120 RPLSSEGEV-EAAIRHLRNADRQLASLIDIHPPPTFDSFH-----TPFLALTRSILYQQL 173
RP ++ G + E A HL D +L SLI P P F PF +L SI+ QQ+
Sbjct: 172 RPTATTGTLLEKAAAHLIATDPRLESLIREQPCPLFTPEGLAEEIDPFRSLVSSIIGQQV 231
Query: 174 AFKAGTSIYTRFIALCG----GEAGV------VPETVLALTPQQLRQIGVSGRKASYLHD 223
+ A SI +F+AL E G PE ++ + LR G+S RKA Y+H
Sbjct: 232 SGAAAKSIKDKFVALFKTNNKDEDGTRPSFFPTPEEIIKMDISTLRTAGLSQRKAEYIHG 291
Query: 224 LARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVR 283
L+ K+ NG LS ++N D+ L LT V G+G WSV MF F+L R DV DLGV+
Sbjct: 292 LSEKFANGELSARMLLNASDEELVEKLTAVRGLGKWSVEMFACFALKRIDVFSTGDLGVQ 351
Query: 284 KGVQLLYSLE-------------ELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
+G + + +P M +L K+ PYRS+ WY+WR +
Sbjct: 352 RGCAVFVGKDVNKLKGKGGGKFKYMPE-KDMLELAAKFAPYRSLFMWYMWRVTD 404
>gi|448431227|ref|ZP_21584998.1| HhH-GPD family protein [Halorubrum tebenquichense DSM 14210]
gi|445688163|gb|ELZ40430.1| HhH-GPD family protein [Halorubrum tebenquichense DSM 14210]
Length = 201
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 102/181 (56%), Gaps = 4/181 (2%)
Query: 142 LASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVL 201
+A+L+D H P F L SI+ QQL+ + +I+ RF+ + GGE PE VL
Sbjct: 18 MAALVDRHGPLDVTPADDEFARLCTSIVNQQLSTASAAAIHERFVDVLGGEP--TPEGVL 75
Query: 202 ALTPQQLRQIGVSGRKASYLHDLARKYQNG--ILSDSAIVNMDDKSLFTMLTMVNGIGSW 259
A +LR+ G+SG K YL ++A +++ + + D ++ LT + G+G W
Sbjct: 76 AADEAELREAGLSGTKVEYLRNVAAAFRDDERAFTHEGVAGESDAAVVDRLTEIRGVGEW 135
Query: 260 SVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYL 319
+ M++IF+L R DVLP+ DL VRKG++ +++ ++M + E WRPYRS + Y+
Sbjct: 136 TARMYLIFALGREDVLPLGDLAVRKGIERVHNDGGDLSRAEMRDIAEAWRPYRSYGTRYV 195
Query: 320 W 320
W
Sbjct: 196 W 196
>gi|161524377|ref|YP_001579389.1| HhH-GPD family protein [Burkholderia multivorans ATCC 17616]
gi|189350868|ref|YP_001946496.1| DNA-3-methyladenine glycosylase II [Burkholderia multivorans ATCC
17616]
gi|421476548|ref|ZP_15924425.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
multivorans CF2]
gi|160341806|gb|ABX14892.1| HhH-GPD family protein [Burkholderia multivorans ATCC 17616]
gi|189334890|dbj|BAG43960.1| DNA-3-methyladenine glycosylase II [Burkholderia multivorans ATCC
17616]
gi|400228084|gb|EJO58041.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
multivorans CF2]
Length = 293
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 122/244 (50%), Gaps = 7/244 (2%)
Query: 82 QASSSQPTESSKATSAKSTKSRAIQQQQQTLTVPRIIARPLSSEGEVEAAIRHLRNADRQ 141
+A ++P + A A +A ++ RP + A L DR
Sbjct: 52 RAKGAEPAQPDHAMQAVDATRKARAADAAADGEDDVVVRP----AYWDKACADLVKRDRI 107
Query: 142 LASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVL 201
L LI P PF+ L RS++ QQ++ + S++ R A C + P+ V+
Sbjct: 108 LKKLIPKFGPAHLVKRGDPFVTLARSVVGQQISVPSAQSLWARIQAAC---PKLAPQPVI 164
Query: 202 ALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSV 261
L +L G+S RK Y+ DLA+ + +G L +M+D+++ LT + GI W+
Sbjct: 165 RLGADKLIACGLSKRKTEYILDLAQHFVSGALHVDKWTSMEDEAVIAELTQIRGISRWTA 224
Query: 262 HMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
MF+IF+L RPDVLP++D G+ + + + Y E S+ ++ W P+R+VA+WY+WR
Sbjct: 225 EMFLIFNLSRPDVLPLDDPGLIRAISVNYFSGEPVTRSEAREVAANWEPWRTVATWYMWR 284
Query: 322 FVEA 325
++A
Sbjct: 285 SLDA 288
>gi|121605783|ref|YP_983112.1| HhH-GPD family protein [Polaromonas naphthalenivorans CJ2]
gi|120594752|gb|ABM38191.1| HhH-GPD family protein [Polaromonas naphthalenivorans CJ2]
Length = 246
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 105/201 (52%), Gaps = 3/201 (1%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A +HL DR + LI S F L RSI+ QQ++ KA +++ RF AL
Sbjct: 49 ACKHLVKKDRVMKRLIPKLGNSCLQSRGDAFSTLARSIIGQQISVKAAQTVWHRFAALA- 107
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
+ P VL L +R G+S RK YL DLA + G + MDD+++ L
Sbjct: 108 --VEMTPAHVLRLKVDDMRATGLSLRKVEYLVDLAINFDAGSIHVQDWQEMDDEAIIAEL 165
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRP 310
+ GIG W+ MF++F L RP+VLP++D+G+ G+ Y E S ++ W P
Sbjct: 166 VAIRGIGRWTAEMFLMFYLTRPNVLPLDDVGLISGISRNYFSGESVSRSDAREVAAAWAP 225
Query: 311 YRSVASWYLWRFVEAKGAPSS 331
Y SVA+WY+WR ++ K AP +
Sbjct: 226 YCSVATWYIWRSLDPKTAPGA 246
>gi|239816064|ref|YP_002944974.1| HhH-GPD family protein [Variovorax paradoxus S110]
gi|239802641|gb|ACS19708.1| HhH-GPD family protein [Variovorax paradoxus S110]
Length = 217
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 102/193 (52%), Gaps = 3/193 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
E A +HL DR + LI +S F L RSI+ QQ++ KA +++ +F+ L
Sbjct: 19 EEACKHLSRKDRVMKRLIPKFGDACLESRGDAFTTLARSIVGQQISVKAAQTVWDKFVVL 78
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
+ P VL L +R G+S RK YL DLA + +G + A +M D+ +
Sbjct: 79 ---PRKLTPANVLKLKVDDMRAAGLSARKIEYLVDLAIHFDSGAVHVDAWKDMADELIID 135
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
L + GIG W+ MF+IF L RP+VLP++DLG+ G+ + Y + S + W
Sbjct: 136 ELVAIRGIGRWTAEMFLIFHLMRPNVLPVDDLGLLNGISVNYFSGDPVSRSDARDVAVAW 195
Query: 309 RPYRSVASWYLWR 321
PY SVA+WY+WR
Sbjct: 196 APYCSVATWYIWR 208
>gi|167903371|ref|ZP_02490576.1| DNA-3-methyladenine glycosylase [Burkholderia pseudomallei NCTC
13177]
Length = 259
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 105/193 (54%), Gaps = 3/193 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P F+ L RS++ QQ++ A S++ +
Sbjct: 61 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVWVKIETA 120
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C + P ++ L ++L G+S RK+ Y+ DLA+ + +G L +MDD+ +
Sbjct: 121 C---PKLAPPQIIKLGQEKLIACGLSKRKSEYILDLAQHFVSGALHVDKWASMDDEDVIA 177
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GIG W+ MF+IF+L RPDVLP++DLG+ + + + Y E S+ ++ W
Sbjct: 178 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 237
Query: 309 RPYRSVASWYLWR 321
P+R+VA+WY+WR
Sbjct: 238 EPWRTVATWYMWR 250
>gi|389774866|ref|ZP_10192985.1| HhH-GPD family protein [Rhodanobacter spathiphylli B39]
gi|388438465|gb|EIL95220.1| HhH-GPD family protein [Rhodanobacter spathiphylli B39]
Length = 220
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 91/163 (55%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R++ YQQL KAG +I R + L A P +L + +R G S RK
Sbjct: 42 PYEALVRAVAYQQLHVKAGDAIVARLLTLHPRSAFPSPRQLLDASFDAMRACGFSARKIE 101
Query: 220 YLHDLARKYQNGILSDSAIVN-MDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A G++ A + D L L + GIG W+V MF+I+SL RPD+LP +
Sbjct: 102 TIRGIAAATLEGVVPGLATAQALADDELIARLGALKGIGRWTVEMFLIYSLARPDILPAD 161
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR+G +LL SL+ P P M + + W P+R+ A+WYLWR
Sbjct: 162 DFGVREGYRLLKSLDAAPTPKAMALIGQAWSPHRTAAAWYLWR 204
>gi|15837927|ref|NP_298615.1| DNA-3-methyladenine glycosidase [Xylella fastidiosa 9a5c]
gi|9106321|gb|AAF84135.1|AE003965_8 DNA-3-methyladenine glycosidase [Xylella fastidiosa 9a5c]
Length = 216
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/207 (39%), Positives = 113/207 (54%), Gaps = 9/207 (4%)
Query: 130 AAIRHLRNADRQLASLID-IHPPPTFDSFHTPF---LALTRSILYQQLAFKAGTSIYTRF 185
AA HL + D L+ + + P P + PF AL R+IL+QQL+ KA ++I R
Sbjct: 2 AAYDHLYHCDPGLSGWMQRLGPLPALRGWRQPFNVVDALARAILFQQLSGKAASTIVARI 61
Query: 186 IALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGIL-SDSAIVNMDDK 244
A+ G A + ET+ + LR GVS K L DL R+ G L S + +M
Sbjct: 62 EAVIG-SACLYAETLACIDDACLRTCGVSSNKILALRDLTRREVAGELPSVRQMGSMHHN 120
Query: 245 SLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQL 304
++ L + GIG W+V M ++F L RPDVLP++DLGVRKG+Q + SL +P P +
Sbjct: 121 TIVEKLIPIRGIGRWTVEMMLMFRLGRPDVLPVDDLGVRKGIQRVDSLAFVPTPKALCTR 180
Query: 305 CEKWRPYRSVASWYLWR---FVEAKGA 328
E W PYR+ A YLWR F E +GA
Sbjct: 181 GECWAPYRTYAGLYLWRIADFHEGEGA 207
>gi|448499252|ref|ZP_21611266.1| HhH-GPD family protein [Halorubrum coriense DSM 10284]
gi|445697589|gb|ELZ49651.1| HhH-GPD family protein [Halorubrum coriense DSM 10284]
Length = 212
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 104/185 (56%), Gaps = 4/185 (2%)
Query: 138 ADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVP 197
AD +A+LID H P F L SI+ QQL+ + +I RF+ + GG+ P
Sbjct: 25 ADPTMATLIDRHGPLDVAPADDEFARLCTSIVNQQLSTASAAAIRERFVGVLGGDP--TP 82
Query: 198 ETVLALTPQQLRQIGVSGRKASYLHDLARKYQNG--ILSDSAIVNMDDKSLFTMLTMVNG 255
+ VLA LR+ G+SG K YL ++A +++ + + D+++ LT + G
Sbjct: 83 DRVLAADRAALREAGLSGTKVEYLRNVAAAFRDDERDFTREGLAEASDEAVVDRLTEITG 142
Query: 256 IGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVA 315
+G W+ M++IF+L R DVLP+ DL VR+G + +Y+ E ++M ++ E WRPYRS
Sbjct: 143 VGPWTARMYLIFALGREDVLPLGDLAVRRGFEQIYNGGESLSRAEMREIGEAWRPYRSYG 202
Query: 316 SWYLW 320
+ Y+W
Sbjct: 203 TRYVW 207
>gi|429190504|ref|YP_007176182.1| HhH-GPD superfamily base excision DNA repair protein
[Natronobacterium gregoryi SP2]
gi|448324220|ref|ZP_21513653.1| HhH-GPD family protein [Natronobacterium gregoryi SP2]
gi|429134722|gb|AFZ71733.1| HhH-GPD superfamily base excision DNA repair protein
[Natronobacterium gregoryi SP2]
gi|445619339|gb|ELY72880.1| HhH-GPD family protein [Natronobacterium gregoryi SP2]
Length = 202
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 114/196 (58%), Gaps = 12/196 (6%)
Query: 129 EAAIRHLRNADRQLASLIDIHPP---PTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRF 185
EAA LR D +A L+D H P P + + L SI+ QQL+ + T++ R
Sbjct: 3 EAAHSVLRK-DPVMAELVDRHDPYVEPDWGEYER----LCISIINQQLSTASATAVRERV 57
Query: 186 IALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKS 245
+ G+ V PE VL+ LR G+S RK Y+ + AR +Q S + + + ++
Sbjct: 58 FDVLDGD--VTPERVLSADDAALRDAGLSRRKVEYVQNAARAFQEHDYSRAGLADSSNEE 115
Query: 246 LFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSL-EELPRPSQMDQL 304
+ LT + GIG W+ M+++F L RPDVLP+ DL +R+G++ LY+ EEL R ++M ++
Sbjct: 116 VVDRLTEITGIGEWTARMYLLFVLERPDVLPLGDLAIRRGIEELYADGEELTR-AEMREI 174
Query: 305 CEKWRPYRSVASWYLW 320
++WRPYRSVA+ Y+W
Sbjct: 175 AKQWRPYRSVATRYVW 190
>gi|289582766|ref|YP_003481232.1| HhH-GPD family protein [Natrialba magadii ATCC 43099]
gi|448281807|ref|ZP_21473100.1| HhH-GPD family protein [Natrialba magadii ATCC 43099]
gi|289532319|gb|ADD06670.1| HhH-GPD family protein [Natrialba magadii ATCC 43099]
gi|445577436|gb|ELY31869.1| HhH-GPD family protein [Natrialba magadii ATCC 43099]
Length = 209
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 106/188 (56%), Gaps = 5/188 (2%)
Query: 142 LASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVL 201
+ L+D H P + T + L SI+ QQL+ + ++ R + E V PETVL
Sbjct: 15 MDRLVDTHDPYVEPDW-TEYERLCISIINQQLSTASAAAVRERVFDVLEDE--VTPETVL 71
Query: 202 ALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSV 261
A Q LR G+S K Y+ + A +Q + + + +D+ + LT + GIG W+
Sbjct: 72 AADDQALRDAGLSRSKVDYIRNAAHAFQEQDFTRAGLAGVDNDEVVDRLTDIKGIGEWTA 131
Query: 262 HMFMIFSLHRPDVLPINDLGVRKGVQLLYS-LEELPRPSQMDQLCEKWRPYRSVASWYLW 320
M+++F L RPD+LP+ DL VR+G++ LYS +EL R ++M + E WRPYRSVA+ Y+W
Sbjct: 132 RMYLLFVLERPDILPLGDLAVRRGIEQLYSNGDELTR-AEMRDIAEDWRPYRSVATRYIW 190
Query: 321 RFVEAKGA 328
EA +
Sbjct: 191 AEYEADSS 198
>gi|222480157|ref|YP_002566394.1| HhH-GPD family protein [Halorubrum lacusprofundi ATCC 49239]
gi|222453059|gb|ACM57324.1| HhH-GPD family protein [Halorubrum lacusprofundi ATCC 49239]
Length = 198
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 106/185 (57%), Gaps = 6/185 (3%)
Query: 139 DRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPE 198
D +A LID H T + F L SI+ QQL+ + +I+ RF+ + GG P+
Sbjct: 12 DSTMARLIDRHGRLTIEPAADEFARLCTSIVNQQLSTASAAAIHERFVDVLGGAP--TPD 69
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGI--LSDSAIVNMDDKSLFTMLTMVNGI 256
VLA LR+ G+SG K YL + A +++G L+ + D+++ LT + G+
Sbjct: 70 DVLAADEVALREAGLSGTKVEYLREAAAAFRDGDRDLTREGFGDASDEAVVAALTEIRGV 129
Query: 257 GSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYS-LEELPRPSQMDQLCEKWRPYRSVA 315
G W+ M++IF+L R DVLP+ DL VRKG++ +Y+ EL R ++M + + WRPYRS
Sbjct: 130 GEWTARMYLIFALGREDVLPLGDLAVRKGIEQVYNDGAELTR-AEMRNIGDAWRPYRSYG 188
Query: 316 SWYLW 320
+ Y+W
Sbjct: 189 TRYVW 193
>gi|167830051|ref|ZP_02461522.1| DNA-3-methyladenine glycosylase [Burkholderia pseudomallei 9]
Length = 230
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 105/193 (54%), Gaps = 3/193 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P F+ L RS++ QQ++ A S++ +
Sbjct: 32 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVWVKIETA 91
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C A P ++ L ++L G+S RK+ Y+ DLA+ + +G L +MDD+ +
Sbjct: 92 CPKLA---PPQIIKLGQEKLIACGLSKRKSEYILDLAQHFVSGALHVDKWASMDDEDVIA 148
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GIG W+ MF+IF+L RPDVLP++DLG+ + + + Y E S+ ++ W
Sbjct: 149 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 208
Query: 309 RPYRSVASWYLWR 321
P+R+VA+WY+WR
Sbjct: 209 EPWRTVATWYMWR 221
>gi|167720282|ref|ZP_02403518.1| DNA-3-methyladenine glycosylase [Burkholderia pseudomallei DM98]
Length = 232
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 105/193 (54%), Gaps = 3/193 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P F+ L RS++ QQ++ A S++ +
Sbjct: 34 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVWVKIETA 93
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C A P ++ L ++L G+S RK+ Y+ DLA+ + +G L +MDD+ +
Sbjct: 94 CPKLA---PPQIIKLGQEKLIACGLSKRKSEYILDLAQHFVSGALHVDKWASMDDEDVIA 150
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GIG W+ MF+IF+L RPDVLP++DLG+ + + + Y E S+ ++ W
Sbjct: 151 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 210
Query: 309 RPYRSVASWYLWR 321
P+R+VA+WY+WR
Sbjct: 211 EPWRTVATWYMWR 223
>gi|358365981|dbj|GAA82602.1| DNA-3-methyladenine glycosylase [Aspergillus kawachii IFO 4308]
Length = 410
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 114/240 (47%), Gaps = 36/240 (15%)
Query: 120 RPLSSEGEV-EAAIRHLRNADRQLASLIDIHPPPTFDSFH-----TPFLALTRSILYQQL 173
RP ++ G + E A HL D +L SLI HP P F PF +L SI+ QQ+
Sbjct: 164 RPTATTGTLLEQAAAHLIATDPRLESLIREHPCPLFTPEGLAEEIDPFRSLVSSIIGQQV 223
Query: 174 AFKAGTSIYTRFIALC------------GGEAGV----VPETVLALTPQQLRQIGVSGRK 217
+ A SI +F+AL GG PE ++ LR G+S RK
Sbjct: 224 SGAAAKSIRDKFVALFNTNTNDNKKDENGGTIRTSFFPTPEDIIKKDITTLRTAGLSQRK 283
Query: 218 ASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPI 277
A Y+H L+ K+ NG LS ++N D+ L LT V G+G WSV MF F+L R DV
Sbjct: 284 AEYIHGLSEKFANGELSARMLLNASDEELVEKLTAVRGLGKWSVEMFACFALKRIDVFST 343
Query: 278 NDLGVRKGVQLLYSLE-------------ELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
DLGV++G + + +P M +L K+ PYRS+ WY+WR +
Sbjct: 344 GDLGVQRGCAVFVGKDVNKLKGKGGGKFKYMPE-KDMLELAAKFAPYRSLFMWYMWRVTD 402
>gi|399010095|ref|ZP_10712473.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM17]
gi|398107845|gb|EJL97836.1| HhH-GPD superfamily base excision DNA repair protein [Pseudomonas
sp. GM17]
Length = 204
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 99/163 (60%), Gaps = 2/163 (1%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P AL R+I YQQL +AG +I RF+ L G + PE +LA + LR G S K +
Sbjct: 39 PCEALVRAIAYQQLHARAGDAILGRFLGLYG-QTFPSPEQILATDFEALRACGFSAGKIA 97
Query: 220 YLHDLARKYQNGILSDSAI-VNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A +G++ D + + MDD++L LT + GIG W+V M +I+SL R D+LP +
Sbjct: 98 TIRGIAEATLSGVVPDYQVALAMDDEALIARLTRLRGIGRWTVEMLLIYSLERLDILPAD 157
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR+G + L LE+ P QM ++ RP+R+VA+WYLWR
Sbjct: 158 DFGVREGYRRLKGLEQQPTRRQMIEIGLSLRPHRTVAAWYLWR 200
>gi|448362927|ref|ZP_21551531.1| HhH-GPD family protein [Natrialba asiatica DSM 12278]
gi|445647549|gb|ELZ00523.1| HhH-GPD family protein [Natrialba asiatica DSM 12278]
Length = 208
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 104/182 (57%), Gaps = 5/182 (2%)
Query: 145 LIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALT 204
LI+ H P +S T + L SI+ QQL+ + ++ R L G E V PETVL
Sbjct: 17 LIETHDP-YVESDWTAYERLCISIINQQLSTASAAAVRERVFDLLGDE--VTPETVLTAE 73
Query: 205 PQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMF 264
+ LR G+S K Y+ + AR +Q + + ++ ++ + + LT + GIG W+ M+
Sbjct: 74 DRALRDAGLSRSKIEYVRNAARAFQEDDYTRDGLADVSNEDVVSRLTEIKGIGEWTARMY 133
Query: 265 MIFSLHRPDVLPINDLGVRKGVQLLY-SLEELPRPSQMDQLCEKWRPYRSVASWYLWRFV 323
++F L RPDVLP+ DL VR+G+ LY EL R ++M ++ E WRPYRS A+ Y+W
Sbjct: 134 LLFVLERPDVLPLGDLAVRRGIDELYGDGAELSR-TEMREIAEAWRPYRSAATRYIWAEY 192
Query: 324 EA 325
EA
Sbjct: 193 EA 194
>gi|398856157|ref|ZP_10612129.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Pseudomonas sp. GM80]
gi|398230275|gb|EJN16327.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Pseudomonas sp. GM80]
Length = 205
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 99/163 (60%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ +L R+I YQQL KAG +I R + L ++ PE +LA +++R G S K +
Sbjct: 39 PYESLVRAIAYQQLHAKAGDAIVGRLVGLFPSQSFPRPEQILATDFERMRSCGFSAGKIA 98
Query: 220 YLHDLARKYQNGILSDSAI-VNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ +G++ D A + MD++ L L + G+G W+V M +I+SL R D+LP +
Sbjct: 99 TIQGIAQATLDGVVPDYATALAMDNEVLIERLISLRGVGRWTVEMLLIYSLERMDILPAD 158
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR+G + L LE P QM ++ KW P+R+VA+WYLWR
Sbjct: 159 DFGVREGYRRLKGLEVQPTRKQMIEIGLKWSPFRTVAAWYLWR 201
>gi|260221172|emb|CBA29471.1| hypothetical protein Csp_A12310 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 207
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 101/193 (52%), Gaps = 3/193 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
E A +HL DR + LI + F+ L RSI+ QQ++ KA +++ RF L
Sbjct: 9 EEACKHLMKKDRVMKRLIPQFGDACLQTRGDAFVTLARSIIGQQISVKAAQTVWDRFAVL 68
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
+ P VL L +R G+S RK YL DLA + NG L +M+D+ +
Sbjct: 69 ---PKKLTPANVLKLKVDDMRAAGLSARKVEYLVDLALHFDNGALHVKDWDSMEDEEIIA 125
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
L + GIG W+ MF+IF L RP+VLP++D G+ G+ Y ++ S ++ W
Sbjct: 126 ELVSIRGIGRWTAEMFLIFHLMRPNVLPLDDDGLITGISQNYFSGDVVSRSDAREVAAAW 185
Query: 309 RPYRSVASWYLWR 321
PY SVA+WY+WR
Sbjct: 186 APYCSVATWYIWR 198
>gi|167739280|ref|ZP_02412054.1| DNA-3-methyladenine glycosylase [Burkholderia pseudomallei 14]
Length = 238
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 105/193 (54%), Gaps = 3/193 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P F+ L RS++ QQ++ A S++ +
Sbjct: 40 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVWVKIETA 99
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C A P ++ L ++L G+S RK+ Y+ DLA+ + +G L +MDD+ +
Sbjct: 100 CPKLA---PPQIIKLGQEKLIACGLSKRKSEYILDLAQHFVSGALHVDKWASMDDEDVIA 156
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GIG W+ MF+IF+L RPDVLP++DLG+ + + + Y E S+ ++ W
Sbjct: 157 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 216
Query: 309 RPYRSVASWYLWR 321
P+R+VA+WY+WR
Sbjct: 217 EPWRTVATWYMWR 229
>gi|167846405|ref|ZP_02471913.1| DNA-3-methyladenine glycosylase [Burkholderia pseudomallei B7210]
Length = 241
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 105/193 (54%), Gaps = 3/193 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P F+ L RS++ QQ++ A S++ +
Sbjct: 43 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVWVKIETA 102
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C A P ++ L ++L G+S RK+ Y+ DLA+ + +G L +MDD+ +
Sbjct: 103 CPKLA---PPQIIKLGQEKLIACGLSKRKSEYILDLAQHFVSGALHVDKWASMDDEDVIA 159
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GIG W+ MF+IF+L RPDVLP++DLG+ + + + Y E S+ ++ W
Sbjct: 160 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 219
Query: 309 RPYRSVASWYLWR 321
P+R+VA+WY+WR
Sbjct: 220 EPWRTVATWYMWR 232
>gi|167916724|ref|ZP_02503815.1| DNA-3-methyladenine glycosylase [Burkholderia pseudomallei 112]
Length = 226
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 105/193 (54%), Gaps = 3/193 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P F+ L RS++ QQ++ A S++ +
Sbjct: 28 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVWVKIETA 87
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C A P ++ L ++L G+S RK+ Y+ DLA+ + +G L +MDD+ +
Sbjct: 88 CPKLA---PPQIIKLGQEKLIACGLSKRKSEYILDLAQHFVSGALHVDKWASMDDEDVIA 144
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GIG W+ MF+IF+L RPDVLP++DLG+ + + + Y E S+ ++ W
Sbjct: 145 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 204
Query: 309 RPYRSVASWYLWR 321
P+R+VA+WY+WR
Sbjct: 205 EPWRTVATWYMWR 217
>gi|253998428|ref|YP_003050491.1| DNA-3-methyladenine glycosylase II [Methylovorus glucosetrophus
SIP3-4]
gi|253985107|gb|ACT49964.1| DNA-3-methyladenine glycosylase II [Methylovorus glucosetrophus
SIP3-4]
Length = 224
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 98/162 (60%), Gaps = 1/162 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R++ +QQL A +I +R +A + PE + QLR G+S K +
Sbjct: 44 PYEALVRAVAHQQLHGNAAAAILSRLMASFPHDGFPSPEQLATADETQLRSCGLSMAKVN 103
Query: 220 YLHDLARKYQNGILSDSAIV-NMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A G + ++I +M ++ L T LT + GIG W+V M +IFSL R DVLP++
Sbjct: 104 AIRGIAAATLAGTVPSASIAADMSEEELITRLTSLKGIGRWTVEMLLIFSLGRNDVLPVD 163
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLW 320
D GVR+G +LL +L E P+P + + E+W+PYRS+A+WYLW
Sbjct: 164 DFGVREGWRLLKNLPEQPKPKALAVIGEQWKPYRSIAAWYLW 205
>gi|313126052|ref|YP_004036322.1| DNA-3-methyladenine glycosylase ii [Halogeometricum borinquense DSM
11551]
gi|448285891|ref|ZP_21477130.1| DNA-3-methyladenine glycosylase ii [Halogeometricum borinquense DSM
11551]
gi|312292417|gb|ADQ66877.1| DNA-3-methyladenine glycosylase II [Halogeometricum borinquense DSM
11551]
gi|445575921|gb|ELY30384.1| DNA-3-methyladenine glycosylase ii [Halogeometricum borinquense DSM
11551]
Length = 187
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 106/190 (55%), Gaps = 6/190 (3%)
Query: 135 LRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAG 194
+RN D QLA L++ H + F SI+ QQL+ ++ +I R
Sbjct: 4 IRN-DEQLAPLVEEHGELAIEPADDEFERFVVSIINQQLSTQSAAAIRERLF----DRFE 58
Query: 195 VVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVN 254
V PE +L LR +G+S +K SY+ ++A +Q L+ + + ++ D+ + LT +
Sbjct: 59 VTPEAMLNADETALRDVGLSSQKISYIQNVATAFQTDDLTRAGMADLTDEDVLMRLTEIR 118
Query: 255 GIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSV 314
G+G W+ M+++F L R DV P+ DLG+RK + LY ++E R + M + E WRPYRSV
Sbjct: 119 GVGDWTAKMYLMFVLGREDVFPVEDLGIRKAMAELYRMDENDR-AVMVKRAEAWRPYRSV 177
Query: 315 ASWYLWRFVE 324
AS YLWR V+
Sbjct: 178 ASRYLWRVVD 187
>gi|448491356|ref|ZP_21608297.1| HhH-GPD family protein [Halorubrum californiensis DSM 19288]
gi|445693127|gb|ELZ45289.1| HhH-GPD family protein [Halorubrum californiensis DSM 19288]
Length = 217
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 111/194 (57%), Gaps = 6/194 (3%)
Query: 130 AAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALC 189
A++ + AD +A+L+D H P F L SI+ QQL+ + +I RF+ +
Sbjct: 22 ASVAKVLRADPTMAALVDRHGPLDIAPADDEFGRLCTSIVNQQLSTASADAIRERFLEVL 81
Query: 190 GGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNG--ILSDSAIVNMDDKSLF 247
GG+ P+ VLA LR+ G+S K YL ++A +++ + + + D+++
Sbjct: 82 GGDP--TPDRVLAADEAALREAGLSATKVEYLRNVADAFRDDERDFTREGLAGVSDEAVV 139
Query: 248 TMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYS-LEELPRPSQMDQLCE 306
LT + G+G+W+ M++IF+L R DVLP+ DL VRKG++ +Y+ EEL R + M ++
Sbjct: 140 DRLTEIKGVGAWTARMYLIFALGREDVLPLGDLAVRKGIEQVYNDGEELSR-ADMREIGA 198
Query: 307 KWRPYRSVASWYLW 320
WRPYRS + Y+W
Sbjct: 199 AWRPYRSYGTRYIW 212
>gi|167894986|ref|ZP_02482388.1| DNA-3-methyladenine glycosylase [Burkholderia pseudomallei 7894]
Length = 234
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 105/193 (54%), Gaps = 3/193 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P F+ L RS++ QQ++ A S++ +
Sbjct: 36 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVWVKIETA 95
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C A P ++ L ++L G+S RK+ Y+ DLA+ + +G L +MDD+ +
Sbjct: 96 CPKLA---PPQIIKLGQEKLIACGLSKRKSEYILDLAQHFVSGALHVDKWASMDDEDVIA 152
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GIG W+ MF+IF+L RPDVLP++DLG+ + + + Y E S+ ++ W
Sbjct: 153 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 212
Query: 309 RPYRSVASWYLWR 321
P+R+VA+WY+WR
Sbjct: 213 EPWRTVATWYMWR 225
>gi|167816495|ref|ZP_02448175.1| DNA-3-methyladenine glycosylase [Burkholderia pseudomallei 91]
gi|167919624|ref|ZP_02506715.1| DNA-3-methyladenine glycosylase [Burkholderia pseudomallei BCC215]
Length = 235
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 105/193 (54%), Gaps = 3/193 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P F+ L RS++ QQ++ A S++ +
Sbjct: 37 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVWVKIETA 96
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C A P ++ L ++L G+S RK+ Y+ DLA+ + +G L +MDD+ +
Sbjct: 97 CPKLA---PPQIIKLGQEKLIACGLSKRKSEYILDLAQHFVSGALHVDKWASMDDEDVIA 153
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GIG W+ MF+IF+L RPDVLP++DLG+ + + + Y E S+ ++ W
Sbjct: 154 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 213
Query: 309 RPYRSVASWYLWR 321
P+R+VA+WY+WR
Sbjct: 214 EPWRTVATWYMWR 226
>gi|421870247|ref|ZP_16301882.1| HhH-GPD base excision DNA repair family protein; putative
3-methyladenine DNA glycosylase/8-oxoguanine DNA
glycosylase [Burkholderia cenocepacia H111]
gi|358069773|emb|CCE52760.1| HhH-GPD base excision DNA repair family protein; putative
3-methyladenine DNA glycosylase/8-oxoguanine DNA
glycosylase [Burkholderia cenocepacia H111]
Length = 275
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 108/200 (54%), Gaps = 3/200 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P PF+ L RS++ QQ++ + S++ R
Sbjct: 77 DKACADLVKRDRILKKLIPKFGPAHLVKRGDPFVTLARSVVGQQISVPSAQSLWARIEDA 136
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C + P+ V+ L +L G+S RK Y+ DLA+ + +G L ++MDD+ +
Sbjct: 137 C---PKLAPQPVIRLGADKLIACGLSKRKTEYILDLAQHFVSGALHVDKWMSMDDEDVIA 193
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GI W+ MF+IF+L RPDVLP++D G+ + + + Y E S+ ++ W
Sbjct: 194 ELTQIRGISRWTAEMFLIFNLSRPDVLPLDDPGLIRAISVNYFSGEPVTRSEAREVAANW 253
Query: 309 RPYRSVASWYLWRFVEAKGA 328
P+R+VA+WY+WR ++A A
Sbjct: 254 EPWRTVATWYMWRSLDAPDA 273
>gi|221214716|ref|ZP_03587685.1| HhH-GPD family protein [Burkholderia multivorans CGD1]
gi|221165255|gb|EED97732.1| HhH-GPD family protein [Burkholderia multivorans CGD1]
Length = 293
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 108/197 (54%), Gaps = 3/197 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P PF+ L RS++ QQ++ + S++ R A
Sbjct: 95 DKACADLVKRDRILKKLIPKFGPAHLVKRGDPFVTLARSVVGQQISVPSAQSLWARIQAA 154
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C + P+ V+ L +L G+S RK Y+ DLA+ + +G L +M+D+++
Sbjct: 155 C---PKLAPQPVIRLGADKLIACGLSKRKTEYILDLAQHFVSGALHVDKWTSMEDEAVIA 211
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GI W+ MF+IF+L RPDVLP++D G+ + + + Y E S+ ++ W
Sbjct: 212 ELTQIRGISRWTAEMFLIFNLSRPDVLPLDDPGLIRAISVNYFSGEPVTRSEAREVAANW 271
Query: 309 RPYRSVASWYLWRFVEA 325
P+R+VA+WY+WR ++A
Sbjct: 272 EPWRTVATWYMWRSLDA 288
>gi|448460392|ref|ZP_21597217.1| HhH-GPD family protein [Halorubrum lipolyticum DSM 21995]
gi|445807133|gb|EMA57219.1| HhH-GPD family protein [Halorubrum lipolyticum DSM 21995]
Length = 198
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 106/182 (58%), Gaps = 6/182 (3%)
Query: 142 LASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVL 201
+A LID H P + F L SI+ QQL+ + +I+ RF+ + G + P+ VL
Sbjct: 15 MARLIDRHGPLAVEPAGDEFARLCTSIVNQQLSTASAAAIHERFVDVLGADP--TPDLVL 72
Query: 202 ALTPQQLRQIGVSGRKASYLHDLARKYQNGI--LSDSAIVNMDDKSLFTMLTMVNGIGSW 259
A LR+ G+SG K YL ++A +++G L+ + + D+++ LT + G+G W
Sbjct: 73 AADESDLREAGLSGTKVEYLRNVAAAFRDGDRDLTREGLADASDEAVVDALTEIRGVGEW 132
Query: 260 SVHMFMIFSLHRPDVLPINDLGVRKGVQLLYS-LEELPRPSQMDQLCEKWRPYRSVASWY 318
+ M++I +L R DVLP+ DL VRKG++ +Y+ EL R ++M + E WRPYRS + Y
Sbjct: 133 TARMYLISALGREDVLPLGDLAVRKGIEQVYNDGGELTR-AEMRDIGEAWRPYRSYGTRY 191
Query: 319 LW 320
+W
Sbjct: 192 VW 193
>gi|397775242|ref|YP_006542788.1| HhH-GPD family protein [Natrinema sp. J7-2]
gi|397684335|gb|AFO58712.1| HhH-GPD family protein [Natrinema sp. J7-2]
Length = 196
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 105/180 (58%), Gaps = 5/180 (2%)
Query: 142 LASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVL 201
+A L+D H P + T + L SI+ QQL+ + ++ R + E V P +VL
Sbjct: 15 MAGLLDRHDPYAEPDW-TEYERLCISIINQQLSTASAAAVRERVFEVL--EGAVTPASVL 71
Query: 202 ALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSV 261
A LR G+S RK Y+ + AR +Q S + + + + + +LT + GIG+W+
Sbjct: 72 AADEAALRDAGLSRRKVEYMRNAARAFQENDYSQAGLASRSNAEVVDLLTEIKGIGTWTA 131
Query: 262 HMFMIFSLHRPDVLPINDLGVRKGVQLLYS-LEELPRPSQMDQLCEKWRPYRSVASWYLW 320
M+++F L RPDVLP+ DL VR+G++ LY+ +EL R ++M ++ E WRPYRS A+ Y+W
Sbjct: 132 RMYLLFVLERPDVLPLGDLAVRRGIESLYADGDELTR-AEMREIAEPWRPYRSAATRYIW 190
>gi|71274870|ref|ZP_00651158.1| HhH-GPD [Xylella fastidiosa Dixon]
gi|71164602|gb|EAO14316.1| HhH-GPD [Xylella fastidiosa Dixon]
gi|71729006|gb|EAO31136.1| HhH-GPD [Xylella fastidiosa Ann-1]
Length = 226
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 113/210 (53%), Gaps = 9/210 (4%)
Query: 127 EVEAAIRHLRNADRQLASLID-IHPPPTFDSFHTPF---LALTRSILYQQLAFKAGTSIY 182
+V AA HL + D L+ + + P P + PF AL R+IL+QQL+ KA ++I
Sbjct: 9 DVVAAYDHLYHCDPGLSGWMQRLGPLPALRGWRQPFNVVDALARAILFQQLSGKAASTIV 68
Query: 183 TRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGIL-SDSAIVNM 241
R A+ G + ET+ + LR GVS K L DL R+ G L S + M
Sbjct: 69 ARIEAVIGSTC-LYAETLACIDDACLRACGVSSNKILALRDLTRREVAGELPSVRQMGAM 127
Query: 242 DDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQM 301
++ L + GIG W+V M ++F L RPDVLP++DLGVRKG+Q + SL +P P +
Sbjct: 128 HHNTIVEKLIPIRGIGRWTVEMMLMFRLGRPDVLPVDDLGVRKGIQRVDSLAFVPTPKAL 187
Query: 302 DQLCEKWRPYRSVASWYLWR---FVEAKGA 328
E W PYR+ A YLWR F E +GA
Sbjct: 188 CTRGECWAPYRTYAGLYLWRIADFHEGEGA 217
>gi|206560513|ref|YP_002231277.1| HhH-GPD superfamily base excision DNA repair protein [Burkholderia
cenocepacia J2315]
gi|444358638|ref|ZP_21160028.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
cenocepacia BC7]
gi|444371561|ref|ZP_21171111.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
cenocepacia K56-2Valvano]
gi|198036554|emb|CAR52451.1| HhH-GPD superfamily base excision DNA repair protein [Burkholderia
cenocepacia J2315]
gi|443595168|gb|ELT63770.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
cenocepacia K56-2Valvano]
gi|443603682|gb|ELT71673.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
cenocepacia BC7]
Length = 275
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 108/200 (54%), Gaps = 3/200 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P PF+ L RS++ QQ++ + S++ R
Sbjct: 77 DKACADLVKRDRILKKLIPKFGPAHLVKRGDPFVTLARSVVGQQISVPSAQSLWARIEDA 136
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C + P+ V+ L +L G+S RK Y+ DLA+ + +G L ++MDD+ +
Sbjct: 137 C---PKLAPQPVIRLGADKLIACGLSKRKTEYILDLAQHFVSGALHVDKWMSMDDEDVIA 193
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GI W+ MF+IF+L RPDVLP++D G+ + + + Y E S+ ++ W
Sbjct: 194 ELTQIRGISRWTAEMFLIFNLSRPDVLPLDDPGLIRAISVNYFSGEPVTRSEAREVAANW 253
Query: 309 RPYRSVASWYLWRFVEAKGA 328
P+R+VA+WY+WR ++A A
Sbjct: 254 EPWRTVATWYMWRSLDAPDA 273
>gi|53723756|ref|YP_103281.1| DNA-3-methyladenine glycosylase [Burkholderia mallei ATCC 23344]
gi|52427179|gb|AAU47772.1| DNA-3-methyladenine glycosylase [Burkholderia mallei ATCC 23344]
Length = 221
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 105/193 (54%), Gaps = 3/193 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P F+ L RS++ QQ++ A S++ +
Sbjct: 23 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVAAAQSVWVKIETA 82
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C A P ++ L ++L G+S RK+ Y+ DLA+ + +G L +MDD+ +
Sbjct: 83 CPKLA---PPQIIKLGQEKLIACGLSKRKSEYILDLAQHFVSGALHVDKWASMDDEDVIA 139
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GIG W+ MF+IF+L RPDVLP++DLG+ + + + Y E S+ ++ W
Sbjct: 140 ELTQIRGIGRWTAEMFLIFNLSRPDVLPLDDLGLIRAISVNYFSGEPVTRSEAREVAANW 199
Query: 309 RPYRSVASWYLWR 321
P+R+VA+WY+WR
Sbjct: 200 EPWRTVATWYMWR 212
>gi|448734428|ref|ZP_21716654.1| HhH-GPD family protein [Halococcus salifodinae DSM 8989]
gi|445800476|gb|EMA50831.1| HhH-GPD family protein [Halococcus salifodinae DSM 8989]
Length = 187
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 102/184 (55%), Gaps = 6/184 (3%)
Query: 142 LASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVL 201
+A LID H P + F L +I+ Q ++ + ++ R L V PETVL
Sbjct: 10 MAELIDEHGPLELEPADNEFRRLVVTIINQSISTASAAAVRERVFDLL---EEVTPETVL 66
Query: 202 ALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSV 261
+ LR G+ K Y+ + AR +Q L+ + + + D+++ LT + GIG+W+
Sbjct: 67 EADEEALRDAGLGEAKTEYVRNAARAFQERDLTRAGLADESDEAVIDHLTEIRGIGAWTG 126
Query: 262 HMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
M++IF L R DV PI DL VR+G++ LY E+ R +M +L E+WRPYRS+A+ YLW
Sbjct: 127 RMYLIFVLGREDVFPIGDLAVRRGIESLYG--EMTR-EEMHELAERWRPYRSIATRYLWA 183
Query: 322 FVEA 325
E+
Sbjct: 184 HYES 187
>gi|319794159|ref|YP_004155799.1| hhh-gpd family protein [Variovorax paradoxus EPS]
gi|315596622|gb|ADU37688.1| HhH-GPD family protein [Variovorax paradoxus EPS]
Length = 216
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 102/193 (52%), Gaps = 3/193 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
E A +HL DR + LI +S F L RS++ QQ++ KA +++ +F L
Sbjct: 18 EEACKHLAKKDRVMKRLIPKFGTACLESRGDAFTTLARSVVGQQISVKAAQTVWDKFAVL 77
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
+ P VL L +R G+S RK YL DLA + +G++ A +M D+ +
Sbjct: 78 ---PRKLTPANVLKLKVDDMRAAGLSARKIEYLVDLALHFDSGVVHVDAWKDMADELIIE 134
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
L + GIG W+ MF+IF L RP+VLP++D+G+ G+ + Y + S + W
Sbjct: 135 ELVAIRGIGRWTAEMFLIFHLMRPNVLPVDDVGLLNGISVNYFSGDPVSRSDARDVAVAW 194
Query: 309 RPYRSVASWYLWR 321
PY SVA+WY+WR
Sbjct: 195 APYCSVATWYIWR 207
>gi|297565566|ref|YP_003684538.1| HhH-GPD family protein [Meiothermus silvanus DSM 9946]
gi|296850015|gb|ADH63030.1| HhH-GPD family protein [Meiothermus silvanus DSM 9946]
Length = 207
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 106/192 (55%), Gaps = 13/192 (6%)
Query: 139 DRQLASLIDIHPPPTFD----SFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAG 194
D +L LI+ + P F PF L SI+ QQL+ KA +I+ R A
Sbjct: 25 DPRLHPLIERYGPAPFHPNPVGIRPPFRTLVGSIVGQQLSGKAADTIWQRLEA----RYP 80
Query: 195 VVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVN 254
+ P+ + TP+ LR +G+S KASY+ DL+R G L I D + LT V
Sbjct: 81 IEPQALYQATPEDLRSLGLSRAKASYIIDLSRFALEGGLE--GIETQPDHEIIAHLTRVK 138
Query: 255 GIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSV 314
GIG WS MF++F L RPDV P+ DLG+RKG + LY + + + +L E++RPYRS
Sbjct: 139 GIGVWSAQMFLMFGLGRPDVWPVLDLGIRKGAEKLYGVTT---KADLLELGERFRPYRSH 195
Query: 315 ASWYLWRFVEAK 326
A+WYLWR +E +
Sbjct: 196 AAWYLWRVLETQ 207
>gi|254252009|ref|ZP_04945327.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Burkholderia dolosa AUO158]
gi|124894618|gb|EAY68498.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Burkholderia dolosa AUO158]
Length = 288
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 108/200 (54%), Gaps = 3/200 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P PF+ L RS++ QQ++ + S++ R
Sbjct: 90 DKACADLMKRDRILKKLIPKFGPAHLVKRGDPFVTLARSVVGQQISAPSAQSLWARIEDA 149
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C + P+ V+ L +L G+S RK Y+ DLA+ + +G L ++MDD+ +
Sbjct: 150 C---PKLAPQPVIRLGADKLIACGLSKRKTEYILDLAQHFVSGALHVDKWMSMDDEDVIA 206
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GI W+ MF+IF+L RPDV+P++D G+ + + + Y E S+ ++ W
Sbjct: 207 ELTQIRGISRWTAEMFLIFNLSRPDVMPLDDPGLIRAISVNYFSGEPVTRSEAREVAANW 266
Query: 309 RPYRSVASWYLWRFVEAKGA 328
P+R+VA+WY+WR ++A A
Sbjct: 267 EPWRTVATWYMWRSLDASDA 286
>gi|169773871|ref|XP_001821404.1| DNA-3-methyladenine glycosylase [Aspergillus oryzae RIB40]
gi|83769265|dbj|BAE59402.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 378
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 113/230 (49%), Gaps = 28/230 (12%)
Query: 120 RPLSSEGEV-EAAIRHLRNADRQLASLIDIHPPPTFD-----SFHTPFLALTRSILYQQL 173
RP ++ G + E A+ HL D +L +I HP P F PF +L SI+ QQ+
Sbjct: 138 RPTATTGTLLEKAVAHLIATDSRLEPVIKQHPCPLFSPEGLAEEVDPFRSLVVSIIGQQV 197
Query: 174 AFKAGTSIYTRFIALCG-GEAGV---------VPETVLALTPQQLRQIGVSGRKASYLHD 223
+ A SI +F+AL G++G PE ++ LR G+S RKA Y+
Sbjct: 198 SGAAAKSIKNKFVALFNSGDSGDNAPEASRFPKPEEIIKCDIATLRTAGLSQRKAEYIQG 257
Query: 224 LARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVR 283
L++K+ +G LS ++N D+ L LT V G+G WSV MF F+L R DV DLGV+
Sbjct: 258 LSQKFASGELSARMLLNASDEELLEKLTAVRGLGKWSVEMFACFALKRIDVFSTGDLGVQ 317
Query: 284 KGVQLLYSLE------------ELPRPSQMDQLCEKWRPYRSVASWYLWR 321
+G + + M +L K+ PYRS+ WY+WR
Sbjct: 318 RGCAAFMGKDVSKLKAKGGGKFKYMAEKDMLELAAKFAPYRSLFMWYMWR 367
>gi|332283465|ref|YP_004415376.1| DNA-3-methyladenine glycosylase [Pusillimonas sp. T7-7]
gi|330427418|gb|AEC18752.1| DNA-3-methyladenine glycosylase [Pusillimonas sp. T7-7]
Length = 216
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 101/183 (55%), Gaps = 2/183 (1%)
Query: 139 DRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPE 198
DR L LI H TPF+ L R+++ Q++ KA +++ RF CG P+
Sbjct: 27 DRILKKLIPRHETEWLAPSATPFVTLARAVVGHQISVKAADAMWQRFTDACGRTP--TPQ 84
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
++ L ++Q G+S RKA Y+ DLA + + +A M D+++ L + GIG
Sbjct: 85 CIIKLAETGIQQSGLSKRKAEYILDLAVHFAEKKVRPAAWRTMTDEAVIADLCAIRGIGR 144
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+ MF+IF+L RPDVLP++D + K + L Y E + ++ + W P+R+VA+WY
Sbjct: 145 WTAEMFLIFNLQRPDVLPLDDASLLKAISLHYFSGEPVSRFEAREVAQAWLPWRTVATWY 204
Query: 319 LWR 321
LWR
Sbjct: 205 LWR 207
>gi|170733432|ref|YP_001765379.1| DNA-3-methyladenine glycosylase II [Burkholderia cenocepacia MC0-3]
gi|169816674|gb|ACA91257.1| DNA-3-methyladenine glycosylase II [Burkholderia cenocepacia MC0-3]
Length = 275
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 107/200 (53%), Gaps = 3/200 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P PF+ L RS++ QQ++ + S++ R
Sbjct: 77 DKACADLVKRDRILKKLIPKFGPAHLVKRGDPFVTLARSVVGQQISVPSAQSLWARIEDA 136
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C + P+ V+ L +L G+S RK Y+ DLA+ + +G L +MDD+ +
Sbjct: 137 C---PKLAPQPVIRLGADKLIACGLSKRKTEYILDLAQHFVSGALHVDKWTSMDDEDVIA 193
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GI W+ MF+IF+L RPDVLP++D G+ + + + Y E S+ ++ W
Sbjct: 194 ELTQIRGISRWTAEMFLIFNLSRPDVLPLDDPGLIRAISVNYFSGEPVTRSEAREVAANW 253
Query: 309 RPYRSVASWYLWRFVEAKGA 328
P+R+VA+WY+WR ++A A
Sbjct: 254 EPWRTVATWYMWRSLDAPDA 273
>gi|78066852|ref|YP_369621.1| 3-methyladenine DNA glycosylase [Burkholderia sp. 383]
gi|77967597|gb|ABB08977.1| 3-methyladenine DNA glycosylase/8- oxoguanineDNA glycosylase
[Burkholderia sp. 383]
Length = 275
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 107/200 (53%), Gaps = 3/200 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P PF+ L RS++ QQ++ + S++ R
Sbjct: 77 DKACADLVKRDRILKKLIPKFGPAHLVKRGDPFVTLARSVVGQQISVPSAQSLWARIGDA 136
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C + P+ V+ L +L G+S RK Y+ DLA+ + +G L +MDD+ +
Sbjct: 137 C---PKLAPQPVIRLGADKLIACGLSKRKTEYILDLAQHFVSGALHVDKWTSMDDEDVIA 193
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GI W+ MF+IF+L RPDVLP++D G+ + + + Y E S+ ++ W
Sbjct: 194 ELTQIRGISRWTAEMFLIFNLSRPDVLPLDDPGLIRAISVNYFSGEPVTRSEAREVAANW 253
Query: 309 RPYRSVASWYLWRFVEAKGA 328
P+R+VA+WY+WR ++A A
Sbjct: 254 EPWRTVATWYMWRSLDAPDA 273
>gi|238491890|ref|XP_002377182.1| DNA-3-methyladenine glycosylase, putative [Aspergillus flavus
NRRL3357]
gi|220697595|gb|EED53936.1| DNA-3-methyladenine glycosylase, putative [Aspergillus flavus
NRRL3357]
Length = 378
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 113/230 (49%), Gaps = 28/230 (12%)
Query: 120 RPLSSEGEV-EAAIRHLRNADRQLASLIDIHPPPTFD-----SFHTPFLALTRSILYQQL 173
RP ++ G + E A+ HL D +L +I HP P F PF +L SI+ QQ+
Sbjct: 138 RPTATTGTLLEKAVAHLIATDSRLEPVIKQHPCPLFSPEGLAEEVDPFRSLVVSIIGQQV 197
Query: 174 AFKAGTSIYTRFIALCG-GEAGV---------VPETVLALTPQQLRQIGVSGRKASYLHD 223
+ A SI +F+AL G++G PE ++ LR G+S RKA Y+
Sbjct: 198 SGAAAKSIKNKFVALFNSGDSGDNAPEASRFPKPEEIIKCDIATLRTAGLSQRKAEYIQG 257
Query: 224 LARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVR 283
L++K+ +G LS ++N D+ L LT V G+G WSV MF F+L R DV DLGV+
Sbjct: 258 LSQKFASGELSARMLLNASDEELLEKLTAVRGLGKWSVEMFACFALKRIDVFSTGDLGVQ 317
Query: 284 KGVQLLYSLE------------ELPRPSQMDQLCEKWRPYRSVASWYLWR 321
+G + + M +L K+ PYRS+ WY+WR
Sbjct: 318 RGCAAFMGKDVSKLKAKGGGKFKYMAEKDMLELAAKFAPYRSLFMWYMWR 367
>gi|284164213|ref|YP_003402492.1| HhH-GPD family protein [Haloterrigena turkmenica DSM 5511]
gi|284013868|gb|ADB59819.1| HhH-GPD family protein [Haloterrigena turkmenica DSM 5511]
Length = 196
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 104/183 (56%), Gaps = 11/183 (6%)
Query: 142 LASLIDIHPP---PTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPE 198
+A LI+ H P P +D F L SI+ QQL+ + T++ R L E V PE
Sbjct: 15 MAELIERHDPYVEPDWDEFER----LCISIINQQLSTASATAVRERVFELLRDE--VTPE 68
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
TVL + LR G+S K Y+ + AR +Q + + + + + + +LT + G+G
Sbjct: 69 TVLEAEDEALRAAGLSESKIEYMRNAARAFQENDYTRAGLADYSNDEVVDLLTEIKGVGE 128
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLY-SLEELPRPSQMDQLCEKWRPYRSVASW 317
W+ M+++F L R DVLP+ DL +R+ ++ LY EL R ++M ++ E+WRPYRSVA+
Sbjct: 129 WTARMYLLFVLEREDVLPLGDLAIRRAIEDLYGDGAELSR-AEMREIAERWRPYRSVATR 187
Query: 318 YLW 320
YLW
Sbjct: 188 YLW 190
>gi|107028743|ref|YP_625838.1| DNA-3-methyladenine glycosylase II [Burkholderia cenocepacia AU
1054]
gi|116690098|ref|YP_835721.1| DNA-3-methyladenine glycosylase II [Burkholderia cenocepacia
HI2424]
gi|254247827|ref|ZP_04941148.1| DNA-3-methyladenine glycosylase II [Burkholderia cenocepacia PC184]
gi|105897907|gb|ABF80865.1| DNA-3-methyladenine glycosylase II [Burkholderia cenocepacia AU
1054]
gi|116648187|gb|ABK08828.1| DNA-3-methyladenine glycosylase II [Burkholderia cenocepacia
HI2424]
gi|124872603|gb|EAY64319.1| DNA-3-methyladenine glycosylase II [Burkholderia cenocepacia PC184]
Length = 275
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 107/200 (53%), Gaps = 3/200 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P PF+ L RS++ QQ++ + S++ R
Sbjct: 77 DKACADLVKRDRILKKLIPKFGPAHLVKRGDPFVTLARSVVGQQISVPSAQSLWARIEDA 136
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C + P+ V+ L +L G+S RK Y+ DLA+ + +G L +MDD+ +
Sbjct: 137 C---PKLAPQPVIRLGADKLIACGLSKRKTEYILDLAQHFVSGALHVDKWTSMDDEDVIA 193
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GI W+ MF+IF+L RPDVLP++D G+ + + + Y E S+ ++ W
Sbjct: 194 ELTQIRGISRWTAEMFLIFNLSRPDVLPLDDPGLIRAISVNYFSGEPVTRSEAREVAANW 253
Query: 309 RPYRSVASWYLWRFVEAKGA 328
P+R+VA+WY+WR ++A A
Sbjct: 254 EPWRTVATWYMWRSLDAPDA 273
>gi|348618233|ref|ZP_08884763.1| putative DNA-3-methyladenine glycosylase [Candidatus Glomeribacter
gigasporarum BEG34]
gi|347816480|emb|CCD29466.1| putative DNA-3-methyladenine glycosylase [Candidatus Glomeribacter
gigasporarum BEG34]
Length = 233
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 103/199 (51%), Gaps = 19/199 (9%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A L +DR L LI + P PF+ L R+I+ QQ++ KA +I+ R
Sbjct: 37 ACAELSESDRILKKLIPLFEPAAAHQRRDPFITLARAIVGQQISVKAAHAIWMR------ 90
Query: 191 GEAGVVPETVLALTPQQLRQI--------GVSGRKASYLHDLARKYQNGILSDSAIVNMD 242
+ ALTP QL Q G+S RK Y+ DLA + + A +D
Sbjct: 91 -----IERAYPALTPAQLAQCEHDSLLRCGLSKRKTEYILDLAHHFSTRAVQADAWEALD 145
Query: 243 DKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMD 302
D+++ L + GIG W+ MF+IF+L RPDVLP++DLG+ + + L Y E S+
Sbjct: 146 DEAIIASLMRIRGIGRWTAEMFLIFNLMRPDVLPLDDLGLLRAISLNYFSGEPVSRSEAR 205
Query: 303 QLCEKWRPYRSVASWYLWR 321
++ W+P+RSVA WYLWR
Sbjct: 206 EVAANWQPWRSVAVWYLWR 224
>gi|329906072|ref|ZP_08274355.1| DNA-3-methyladenine glycosylase II [Oxalobacteraceae bacterium
IMCC9480]
gi|327547347|gb|EGF32178.1| DNA-3-methyladenine glycosylase II [Oxalobacteraceae bacterium
IMCC9480]
Length = 216
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 110/212 (51%), Gaps = 13/212 (6%)
Query: 118 IARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHT-----PFLALTRSILYQQ 172
+A L + G E A L DR + LI P F H PF+ L RSI+ QQ
Sbjct: 7 MAGQLGAPGYWEDAKIELMKRDRIMRKLI-----PQFGDVHLTGRGEPFVTLARSIIGQQ 61
Query: 173 LAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGI 232
++ K+ + + RF+ +C P V+ L G+S RKA Y+ DLA ++
Sbjct: 62 ISVKSAEAAWQRFLLVCPKS---TPAQVVKAGAADLAGCGLSKRKADYILDLAEHFKAKR 118
Query: 233 LSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSL 292
+ MDD+++ L + GIG W+ MF+IF+L RP++LP++D+G+ G+ L Y
Sbjct: 119 VHADKWAEMDDEAVIAELIQIRGIGRWTAEMFLIFNLLRPNILPLDDVGLLNGISLNYFS 178
Query: 293 EELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
E S ++ W P+R+VA+WYLWR +E
Sbjct: 179 GEPVSRSDAREVSANWEPWRTVATWYLWRSLE 210
>gi|170729879|ref|YP_001775312.1| DNA-3-methyladenine glycosidase [Xylella fastidiosa M12]
gi|167964672|gb|ACA11682.1| DNA-3-methyladenine glycosidase [Xylella fastidiosa M12]
Length = 226
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 113/210 (53%), Gaps = 9/210 (4%)
Query: 127 EVEAAIRHLRNADRQLASLID-IHPPPTFDSFHTPF---LALTRSILYQQLAFKAGTSIY 182
+V AA HL + D L+ + + P P + PF AL R+IL+QQL+ KA ++I
Sbjct: 9 DVVAAYDHLYHCDPGLSGWMQRLGPLPALRGWRQPFNVVDALARAILFQQLSGKAASTIV 68
Query: 183 TRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGIL-SDSAIVNM 241
R A+ G + ET+ + LR GVS K L DL R+ G L S + M
Sbjct: 69 ARIEAVIGSTC-LYAETLACIDDACLRACGVSSNKILALRDLTRREVAGELPSVRQMGAM 127
Query: 242 DDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQM 301
++ L + GIG W+V M ++F L RPDVLP++DLGVRKG+Q + +L +P P +
Sbjct: 128 HHNTIVEKLIPIRGIGRWTVEMMLMFRLGRPDVLPVDDLGVRKGIQRVDTLAFVPTPKAL 187
Query: 302 DQLCEKWRPYRSVASWYLWR---FVEAKGA 328
E W PYR+ A YLWR F E +GA
Sbjct: 188 CTRGECWAPYRTYAGLYLWRIADFHEGEGA 217
>gi|242765840|ref|XP_002341055.1| DNA-3-methyladenine glycosylase, putative [Talaromyces stipitatus
ATCC 10500]
gi|218724251|gb|EED23668.1| DNA-3-methyladenine glycosylase, putative [Talaromyces stipitatus
ATCC 10500]
Length = 382
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 111/233 (47%), Gaps = 28/233 (12%)
Query: 120 RPLSSEGEV-EAAIRHLRNADRQLASLIDIH-----PPPTFDSFHTPFLALTRSILYQQL 173
RP+++ G + E A+ HL + D +L LI+ H P PF +L SI+ QQ+
Sbjct: 142 RPIATTGNLLEKALEHLTSVDARLKPLIEQHHCRIFSPEGLAEQIDPFDSLISSIMAQQV 201
Query: 174 AFKAGTSIYTRFIALCGGEAGV-----------VPETVLALTPQQLRQIGVSGRKASYLH 222
+ A SI +F+ L V P V L LR G+S RKA Y+
Sbjct: 202 SGAAAKSIKNKFLDLFDSSKDVQTDAEGKRRFPTPAQVAKLDIPTLRTAGLSQRKAEYVQ 261
Query: 223 DLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGV 282
LA K+ +G LS ++ D+ + ML V G+G WSV MF F+L R DV DLGV
Sbjct: 262 GLAEKFASGELSTQKLLRASDEEVMEMLIAVRGLGRWSVEMFSCFALKRTDVFSTGDLGV 321
Query: 283 RKGVQLLYSLE-----------ELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
++G + + S M +L EK+RPYRS+ WY+WR E
Sbjct: 322 QRGCAAFVGKDVNKLKAKGGKFKYMSESDMLELAEKFRPYRSLFMWYMWRVEE 374
>gi|313200503|ref|YP_004039161.1| DNA-3-methyladenine glycosylase ii [Methylovorus sp. MP688]
gi|312439819|gb|ADQ83925.1| DNA-3-methyladenine glycosylase II [Methylovorus sp. MP688]
Length = 224
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 107/194 (55%), Gaps = 3/194 (1%)
Query: 130 AAIRHLRNADRQLASLIDIHPPPTFDSFH--TPFLALTRSILYQQLAFKAGTSIYTRFIA 187
AA R L D L+ + P P+ AL R++ +QQL A +I +R +A
Sbjct: 12 AASRFLAGLDADWQRLVTLVGPCAIQRREQREPYEALVRAVAHQQLHGNAAAAILSRLMA 71
Query: 188 LCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIV-NMDDKSL 246
++ E + QLR G+S K + + +A G + ++I +M ++ L
Sbjct: 72 SFPHDSFPSAEQLATADETQLRSCGLSMAKVNAIRGIAAATLAGTVPSASIAADMSEEEL 131
Query: 247 FTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCE 306
T LT + GIG W+V M +IFSL R DVLP++D GVR+G +LL +L E P+P + + E
Sbjct: 132 ITRLTSLKGIGRWTVEMLLIFSLGRNDVLPVDDFGVREGWRLLKNLPEQPKPKALAVIGE 191
Query: 307 KWRPYRSVASWYLW 320
+W+PYRS+A+WYLW
Sbjct: 192 QWKPYRSIAAWYLW 205
>gi|452003987|gb|EMD96443.1| hypothetical protein COCHEDRAFT_1162091 [Cochliobolus
heterostrophus C5]
Length = 434
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 129/265 (48%), Gaps = 30/265 (11%)
Query: 82 QASSSQPTESSKATSAKSTKSRAIQQQQQTLTVPRIIARPLSS---EGEVEAAIRHLRNA 138
QA S P + AT A+ K++ + P + A P +S + ++ A HL N
Sbjct: 169 QAYGSSPVKPEDATPARKRKAKEV-------VPPDVGAIPRASTNIDRLLKDAEAHLVNV 221
Query: 139 DRQLASLIDIH-----PPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEA 193
D +L +LI+ H P PF AL+ I+ QQ++ +A SI ++F AL
Sbjct: 222 DPKLKTLIEKHHCKIFSPEGLREVVDPFTALSSGIIGQQVSSQAAASIRSKFTALFPSTH 281
Query: 194 GVVPE--TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLT 251
P VLAL LR G+S RKA Y+H LA K+ +G LS +V+ D+ L L
Sbjct: 282 PSFPSPSQVLALPLPTLRTAGLSQRKAEYIHGLAEKFASGELSAEMLVSASDEELIEKLV 341
Query: 252 MVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPR------------PS 299
V G+G WSV MF F L R DV DLGV++G+ +Y+ ++ +
Sbjct: 342 AVRGLGRWSVEMFACFGLKRMDVFSTGDLGVQRGMA-VYAGRDVSKLKNKGGKWKYMSEQ 400
Query: 300 QMDQLCEKWRPYRSVASWYLWRFVE 324
+M K+ PYRS+ WY+WR +
Sbjct: 401 EMLATAAKFSPYRSLLMWYMWRIAD 425
>gi|448339057|ref|ZP_21528088.1| HhH-GPD family protein [Natrinema pallidum DSM 3751]
gi|445621028|gb|ELY74514.1| HhH-GPD family protein [Natrinema pallidum DSM 3751]
Length = 196
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 114/196 (58%), Gaps = 12/196 (6%)
Query: 129 EAAIRHLRNADRQLASLIDIHPP---PTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRF 185
EAA LR+ D +A+L+D H P P ++ + L SI+ QQL+ + ++ R
Sbjct: 3 EAAHAVLRD-DPVMAALVDRHDPYVEPDWNEYER----LCISIINQQLSTASAAAVRERV 57
Query: 186 IALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKS 245
L G+ V P TVLA LR G+S K Y+ + AR +Q + + + + +
Sbjct: 58 FDLLEGD--VTPATVLAADEAALRDAGLSRSKVEYIRNAARAFQETDYTRAGLASYANDE 115
Query: 246 LFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSL-EELPRPSQMDQL 304
+ +LT + G+G+W+ M+++F L RPDVLP+ DL VR+G++ LY+ +EL R ++M ++
Sbjct: 116 VIDLLTEIKGVGAWTARMYLLFVLERPDVLPLGDLAVRRGIEELYADGDELTR-AEMREI 174
Query: 305 CEKWRPYRSVASWYLW 320
E WRPYRS A+ Y+W
Sbjct: 175 AEPWRPYRSAATRYIW 190
>gi|237747643|ref|ZP_04578123.1| HhH-GPD family protein [Oxalobacter formigenes OXCC13]
gi|229379005|gb|EEO29096.1| HhH-GPD family protein [Oxalobacter formigenes OXCC13]
Length = 214
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 105/197 (53%), Gaps = 3/197 (1%)
Query: 125 EGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTR 184
EG + A L D + LI + PF L RSI+ QQ++ KA SI+ R
Sbjct: 12 EGCWDRACAELGMRDPIMQKLIATSGKDRLQTRGEPFQTLARSIVGQQISVKAADSIWKR 71
Query: 185 FIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDK 244
F+ +C + PE ++ + + L G+S RK YL DLA + + +M D+
Sbjct: 72 FLLVCPASS---PEEIMTASAEMLSAAGLSRRKVEYLKDLAFHFVERKIQADQWPDMPDE 128
Query: 245 SLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQL 304
+ LT V GIG W+ MF+IF+L RP+VLP++D+G+ KG+ + Y + + ++
Sbjct: 129 EIIADLTQVRGIGRWTAEMFLIFNLMRPNVLPLDDVGLLKGISMSYFSGKDIGKKDVQEI 188
Query: 305 CEKWRPYRSVASWYLWR 321
KW P+ +VA+WYLWR
Sbjct: 189 AGKWEPWCTVATWYLWR 205
>gi|218437133|ref|YP_002375462.1| HhH-GPD family protein [Cyanothece sp. PCC 7424]
gi|218169861|gb|ACK68594.1| HhH-GPD family protein [Cyanothece sp. PCC 7424]
Length = 210
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 107/197 (54%), Gaps = 9/197 (4%)
Query: 131 AIRHLRNADRQLASLI------DIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTR 184
A+ +L+ AD L +I + P+ S AL +I+ QQ++ K IY R
Sbjct: 6 ALSYLQEADSILGEIIVQIGECKLGKTPSNSSLLE---ALAWAIISQQISTKVANKIYQR 62
Query: 185 FIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDK 244
F+ + + +L + LR +G+S K YL +LA+ ++ + + M+D
Sbjct: 63 FLNFYNDATPLTAKNLLNTPEEDLRSLGISRNKIRYLKNLAKAVEDNLPPLYQLELMEDW 122
Query: 245 SLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQL 304
+ +LT + G+G W+ M +IF L+R D+LP DLG+R ++ LY L ELP P ++ +
Sbjct: 123 EIIHLLTQIKGVGIWTAQMLLIFRLNRLDILPSADLGIRTAIKNLYQLPELPSPEIVEAI 182
Query: 305 CEKWRPYRSVASWYLWR 321
KW+PYR++ASWYLWR
Sbjct: 183 GYKWKPYRTIASWYLWR 199
>gi|70994738|ref|XP_752146.1| DNA-3-methyladenine glycosylase [Aspergillus fumigatus Af293]
gi|66849780|gb|EAL90108.1| DNA-3-methyladenine glycosylase, putative [Aspergillus fumigatus
Af293]
gi|159124939|gb|EDP50056.1| DNA-3-methyladenine glycosylase, putative [Aspergillus fumigatus
A1163]
Length = 382
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 112/235 (47%), Gaps = 38/235 (16%)
Query: 120 RPLSSEGEV-EAAIRHLRNADRQLASLIDIHPPPTFDSFH-----TPFLALTRSILYQQL 173
RP ++ G + E A+ HL D +L LI HP P F PF +L SI+ QQ+
Sbjct: 142 RPTATTGTLLEKAVAHLIATDARLEPLIRRHPCPLFSPEGLAEEIDPFRSLVSSIIGQQV 201
Query: 174 AFKAGTSIYTRFIALCGGEAGV----------VPETVLALTPQQLRQIGVSGRKASYLHD 223
+ A SI +F+AL + PE V+ LR G+S RKA Y+H
Sbjct: 202 SGAAARSIKDKFVALFNKDNEGQDPAKPPRFPTPEEVVQCDLATLRTAGLSQRKAEYIHG 261
Query: 224 LARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVR 283
L++K+ G LS ++N D+ L LT V G+G WSV MF F+L R DV DLGV+
Sbjct: 262 LSQKFATGELSARMLLNASDEELVEKLTAVRGLGRWSVEMFACFALKRIDVFSTGDLGVQ 321
Query: 284 KGV-----------------QLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
+G + Y E+ M +L K+ PYRS+ WY+WR
Sbjct: 322 RGCAAFMGKDVSKLKAKGGGKFKYMAEK-----DMLELAAKFAPYRSLFMWYMWR 371
>gi|421467268|ref|ZP_15915904.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
multivorans ATCC BAA-247]
gi|400233847|gb|EJO63355.1| base excision DNA repair protein, HhH-GPD family [Burkholderia
multivorans ATCC BAA-247]
Length = 293
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 121/244 (49%), Gaps = 7/244 (2%)
Query: 82 QASSSQPTESSKATSAKSTKSRAIQQQQQTLTVPRIIARPLSSEGEVEAAIRHLRNADRQ 141
+A ++P + A A +A ++ RP + A L DR
Sbjct: 52 RAKGAEPAQPDHAMQAVDATRKARAADAAADGEDDVVVRP----AYWDKACADLVKRDRI 107
Query: 142 LASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVL 201
L LI P F+ L RS++ QQ++ + S++ R A C + P+ V+
Sbjct: 108 LKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVPSAQSLWARIQAAC---PKLAPQPVI 164
Query: 202 ALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSV 261
L +L G+S RK Y+ DLA+ + +G L +M+D+++ LT + GI W+
Sbjct: 165 RLGADKLIACGLSKRKTEYILDLAQHFVSGALHVDKWTSMEDEAVIAELTQIRGISRWTA 224
Query: 262 HMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
MF+IF+L RPDVLP++D G+ + + + Y E S+ ++ W P+R+VA+WY+WR
Sbjct: 225 EMFLIFNLSRPDVLPLDDPGLIRAISVNYFSGEPVTRSEAREVAANWEPWRTVATWYMWR 284
Query: 322 FVEA 325
++A
Sbjct: 285 SLDA 288
>gi|402566137|ref|YP_006615482.1| HhH-GPD family protein [Burkholderia cepacia GG4]
gi|402247334|gb|AFQ47788.1| HhH-GPD family protein [Burkholderia cepacia GG4]
Length = 287
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 106/197 (53%), Gaps = 3/197 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR + LI P PF+ L RS++ QQ++ + +++ R
Sbjct: 89 DKACADLVKRDRIMKKLIPKFGPAHLVKRGDPFVTLARSVVGQQISVPSAQALWARIEDA 148
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C + P+ V+ L +L G+S RK Y+ DLA+ + +G L +MDD+ +
Sbjct: 149 C---PKLAPQPVIRLGADKLIACGLSKRKTEYILDLAQHFVSGALHVDKWTSMDDEDVIA 205
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GI W+ MF+IF+L RPDVLP++D G+ + + + Y E S+ ++ W
Sbjct: 206 ELTQIRGISRWTAEMFLIFNLSRPDVLPLDDPGLIRAISVNYFSGEPVTRSEAREVAANW 265
Query: 309 RPYRSVASWYLWRFVEA 325
P+R+VA+WY+WR ++A
Sbjct: 266 EPWRTVATWYMWRSLDA 282
>gi|406959007|gb|EKD86476.1| hypothetical protein ACD_37C00275G0005 [uncultured bacterium]
Length = 198
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 112/199 (56%), Gaps = 1/199 (0%)
Query: 128 VEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIA 187
++ A++H + D L + P F+ + F++LTR I+ QQL+ K I+ RF
Sbjct: 1 MDKALKHFKKVDLVLYEIGLKIEPLEFEKSNDYFVSLTREIIGQQLSGKVADVIFERFKD 60
Query: 188 LCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLF 247
L + + +L + Q+LR +G S K S+L DLA K G + I N++++ +
Sbjct: 61 LFPKKK-ITARYLLTIPDQRLRDVGTSWGKVSFLKDLAEKVSGGEVDLKTIDNLENEKVT 119
Query: 248 TMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEK 307
+L + G+G W+ MF++F+L RPDV DLG++ + LY L++ P +++ ++ K
Sbjct: 120 ELLLKIKGVGPWTAEMFLMFALQRPDVFSTGDLGLQNAIIKLYKLKDKPSHNKLLEISAK 179
Query: 308 WRPYRSVASWYLWRFVEAK 326
W P+R++AS LWR +E K
Sbjct: 180 WSPHRTIASRILWRSLELK 198
>gi|115352163|ref|YP_774002.1| HhH-GPD family protein [Burkholderia ambifaria AMMD]
gi|115282151|gb|ABI87668.1| HhH-GPD family protein [Burkholderia ambifaria AMMD]
Length = 287
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 107/200 (53%), Gaps = 3/200 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P PF+ L RS++ QQ++ + +++ R
Sbjct: 90 DKACADLVKRDRILKKLIPKFGPAHLVKRGDPFVTLARSVVGQQISVPSAQALWARIEDA 149
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C + P+ V+ L +L G+S RK Y+ DLA+ + +G L +MDD+ +
Sbjct: 150 C---PKLAPQPVIRLGADKLIACGLSKRKTEYILDLAQHFVSGALHVDKWTSMDDEDVIA 206
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GI W+ MF+IF+L RPDVLP++D G+ + + + Y E S+ ++ W
Sbjct: 207 ELTQIRGISRWTAEMFLIFNLSRPDVLPLDDPGLIRAISVNYFSGEPVTRSEAREVAANW 266
Query: 309 RPYRSVASWYLWRFVEAKGA 328
P+R+VA+WY+WR ++A A
Sbjct: 267 EPWRTVATWYMWRSLDAPDA 286
>gi|193222289|emb|CAL61460.2| Putative DNA-3-methyladenine glycosylase [Herminiimonas
arsenicoxydans]
Length = 215
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 109/207 (52%), Gaps = 14/207 (6%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHT-----PFLALTRSILYQQLAFKAGTSIYT 183
E A L DR + LI P F H PF L RSI+ QQ++ KA S++
Sbjct: 18 EEAKVELMKRDRIMRKLI-----PQFGDLHLASRGEPFSTLARSIIGQQISVKAADSVWQ 72
Query: 184 RFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDD 243
RF+ +C P V+ +L G+S RK+ Y+ DLA ++ ++ M+D
Sbjct: 73 RFLEIC---PKCTPVQVIK-AGDKLASCGLSKRKSEYILDLADHFKAKRVNCDKWAEMED 128
Query: 244 KSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQ 303
+ + L + GIG W+ MF+IF+L RP++LP++D+G+ G+ Y E S +
Sbjct: 129 EDVIADLIQIRGIGRWTAEMFLIFNLLRPNILPLDDVGLLAGISRNYFSGEPVSRSDARE 188
Query: 304 LCEKWRPYRSVASWYLWRFVEAKGAPS 330
+ W PYR+VA+WYLWR ++A AP+
Sbjct: 189 VAANWEPYRTVATWYLWRSLDAVSAPA 215
>gi|448365297|ref|ZP_21553775.1| HhH-GPD family protein [Natrialba aegyptia DSM 13077]
gi|445655819|gb|ELZ08663.1| HhH-GPD family protein [Natrialba aegyptia DSM 13077]
Length = 209
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 110/201 (54%), Gaps = 9/201 (4%)
Query: 127 EVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFI 186
E E+ +R D + LI+ H P + T + L SI+ QQL+ + ++ R
Sbjct: 4 EAESVLRR----DPVMNRLIETHDPYVEPDW-TEYERLCISIINQQLSTASAAAVRERVF 58
Query: 187 ALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSL 246
GGE + PE VLA + LR G+S K SYL + AR +Q + + + ++
Sbjct: 59 DHFGGE--LTPEAVLAAEEEPLRDAGLSRSKVSYLQNAARAFQENDYTREGLAEFSNAAV 116
Query: 247 FTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYS-LEELPRPSQMDQLC 305
LT + GIG+W+ M+++F L RPD+LP+ DL VR+G+ LY EL R ++M ++
Sbjct: 117 VDQLTEITGIGAWTARMYLLFVLERPDILPLGDLAVRRGIDELYGDGAELTR-AEMREIA 175
Query: 306 EKWRPYRSVASWYLWRFVEAK 326
E WRPYRS A+ Y+W EA+
Sbjct: 176 EAWRPYRSAATRYIWAEYEAE 196
>gi|452819252|gb|EME26316.1| DNA-3-methyladenine glycosylase II [Galdieria sulphuraria]
Length = 248
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 95/167 (56%), Gaps = 6/167 (3%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV--PETVLALTPQQLRQIGVSGRKA 218
F +L ++I+ QQL+ KA +I R +L G V ++ L QLRQ G+S RK
Sbjct: 71 FPSLIKAIVSQQLSGKAAKAIMERLHSLLQGTVTEVEIANRIVNLEQAQLRQAGLSQRKV 130
Query: 219 SYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
YL LA+ + +G LSD + ++ D L + L V GIG W++HM MIF+L R DVLP
Sbjct: 131 EYLKGLAQLFADGTLSDDELASLSDHDLTSRLLTVKGIGEWTIHMLMIFALQRKDVLPFG 190
Query: 279 DLGVRKGVQLLYSLEE----LPRPSQMDQLCEKWRPYRSVASWYLWR 321
DLGVRKG + L + + + + L E +RPYR+ SW +W+
Sbjct: 191 DLGVRKGAIKFFGLSDQQKRWKKKEEWEALFEPYRPYRTYVSWLMWK 237
>gi|134296082|ref|YP_001119817.1| HhH-GPD family protein [Burkholderia vietnamiensis G4]
gi|387902614|ref|YP_006332953.1| DNA-3-methyladenine glycosylase II [Burkholderia sp. KJ006]
gi|134139239|gb|ABO54982.1| HhH-GPD family protein [Burkholderia vietnamiensis G4]
gi|387577506|gb|AFJ86222.1| DNA-3-methyladenine glycosylase II [Burkholderia sp. KJ006]
Length = 287
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 105/196 (53%), Gaps = 3/196 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P PF+ L RS++ QQ++ + +++ R
Sbjct: 88 DKACADLVKRDRILKKLIPKFGPAHLVKRGEPFVTLARSVVGQQISVPSAQALWARIEDA 147
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C + P+ V+ L +L G+S RK Y+ DLA+ + +G L +MDD+ +
Sbjct: 148 C---PKLAPQPVIRLGADKLIACGLSKRKTEYILDLAQHFVSGALHVDKWTSMDDEDVIA 204
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GI W+ MF+IF+L RPDVLP++D G+ + + + Y E S+ ++ W
Sbjct: 205 ELTQIRGISRWTAEMFLIFNLSRPDVLPLDDPGLIRAISVNYFSGEPVTRSEAREVAANW 264
Query: 309 RPYRSVASWYLWRFVE 324
P+R+VA+WY+WR ++
Sbjct: 265 EPWRTVATWYMWRSLD 280
>gi|448395137|ref|ZP_21568557.1| HhH-GPD family protein [Haloterrigena salina JCM 13891]
gi|445661737|gb|ELZ14518.1| HhH-GPD family protein [Haloterrigena salina JCM 13891]
Length = 196
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 104/183 (56%), Gaps = 11/183 (6%)
Query: 142 LASLIDIHPP---PTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPE 198
+A LI+ H P P ++ F L SI+ QQL+ + T++ R L E V PE
Sbjct: 15 MAELIERHDPYVEPDWNEFER----LCISIINQQLSTASATAVRERVFELLRDE--VTPE 68
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
TVL + LR G+S K Y+ + AR ++ + + + + + + +LT + G+G
Sbjct: 69 TVLEAEDEALRAAGLSESKIEYMRNAARAFRENDYTRAGLADYSNDEVIDLLTEIKGVGE 128
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLY-SLEELPRPSQMDQLCEKWRPYRSVASW 317
W+ M+++F L R DVLP+ DL +R+ ++ LY EEL R ++M ++ E+WRPYRS A+
Sbjct: 129 WTARMYLLFVLQREDVLPLGDLAIRRAIEELYGDGEELSR-AEMREIAERWRPYRSAATR 187
Query: 318 YLW 320
YLW
Sbjct: 188 YLW 190
>gi|391869074|gb|EIT78279.1| 3-methyladenine DNA glycosidase [Aspergillus oryzae 3.042]
Length = 379
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 114/236 (48%), Gaps = 39/236 (16%)
Query: 120 RPLSSEGEV-EAAIRHLRNADRQLASLIDIHPPPTFD-----SFHTPFLALTRSILYQQL 173
RP ++ G + E A+ HL D +L +I HP P F PF +L SI+ QQ+
Sbjct: 138 RPTATTGTLLEKAVAHLIATDSRLEPVIKQHPCPLFSPEGLAEEVDPFRSLVVSIIGQQV 197
Query: 174 AFKAGTSIYTRFIALCG-GEAGV---------VPETVLALTPQQLRQIGVSGRKASYLHD 223
+ A SI +F+AL G++G PE ++ LR G+S RKA Y+
Sbjct: 198 SGAAAKSIKNKFVALFNSGDSGDNAPEASRFPKPEEIIKCDIATLRTAGLSQRKAEYIQG 257
Query: 224 LARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVR 283
L++K+ +G LS ++N D+ L LT V G+G WSV MF F+L R DV DLGV
Sbjct: 258 LSQKFASGELSARMLLNASDEELLEKLTAVRGLGKWSVEMFACFALKRIDVFSTGDLGVH 317
Query: 284 K------------------GVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
+ G + Y E+ M +L K+ PYRS+ WY+WR
Sbjct: 318 RRGCAAFMGKDVSKLKAKGGGKFKYMAEK-----DMLELAAKFAPYRSLFMWYMWR 368
>gi|386332551|ref|YP_006028720.1| dna-3-methyladenine glycosylase protein [Ralstonia solanacearum
Po82]
gi|334194999|gb|AEG68184.1| dna-3-methyladenine glycosylase protein [Ralstonia solanacearum
Po82]
Length = 215
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 93/164 (56%), Gaps = 1/164 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R+I YQQL KAG +I R +AL G P +L LR G S K +
Sbjct: 49 PYEALVRAIAYQQLHAKAGDAILGRLLALYPGTGFPSPGQLLDTDETALRGCGFSATKLA 108
Query: 220 YLHDLARKYQNGIL-SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ +G++ + + M D++L L + G+G W+V M +I++L R D+LP +
Sbjct: 109 TIRGIAQASLDGVVPTRGEALAMPDEALIERLVTLRGVGRWTVEMLLIYTLERSDILPAD 168
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRF 322
D GVR+G + L LE P QM + WRPYR++A+WYLWR
Sbjct: 169 DFGVREGYRRLKRLEAAPTRRQMMETGRAWRPYRTIAAWYLWRM 212
>gi|415923929|ref|ZP_11554819.1| DNA-3-methyladenine glycosylase II [Herbaspirillum frisingense
GSF30]
gi|407760438|gb|EKF69731.1| DNA-3-methyladenine glycosylase II [Herbaspirillum frisingense
GSF30]
Length = 219
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 106/197 (53%), Gaps = 11/197 (5%)
Query: 129 EAAIRHLRNADRQLASLI----DIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTR 184
E A L DR + LI D+ D+F T L RS++ QQ++ KA +++ R
Sbjct: 21 EEAKAELMKRDRIMRKLIPQFGDLQLTVRGDAFTT----LARSVIGQQISTKAANAVWQR 76
Query: 185 FIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDK 244
F+ C P V+ P+ L G+S RKA Y+ DLA ++ + M+D+
Sbjct: 77 FLEAC---PRCTPGQVIRTGPEALAACGLSKRKAEYILDLAAHFKAKTVHPDKWAEMEDE 133
Query: 245 SLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQL 304
++ + + GIG W+ MF+IF+L RP+VLP++DLG+ KG+ + Y E S ++
Sbjct: 134 AVIAEMIQIRGIGRWTAEMFLIFNLLRPNVLPLDDLGLLKGISVSYFSGEPVSRSDAREV 193
Query: 305 CEKWRPYRSVASWYLWR 321
W P+R+VA+WYLWR
Sbjct: 194 AANWEPWRTVATWYLWR 210
>gi|357008835|ref|ZP_09073834.1| HhH-GPD family protein [Paenibacillus elgii B69]
Length = 215
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 114/204 (55%), Gaps = 4/204 (1%)
Query: 132 IRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGG 191
I +L D +LA+LI + TF+ + F +L SI+ QQL+ KA +I R +L
Sbjct: 10 ISYLCRNDAKLAALIALIGEVTFNVRSSHFESLVLSIVGQQLSVKAAATINNRVRSLV-- 67
Query: 192 EAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLT 251
+ + PE + + P+ LR G+S K +Y+ DL+ K + + + + ++D+ + MLT
Sbjct: 68 -SSITPEEIDRVDPETLRTAGLSSAKINYIKDLSTKMLHQEIDLTLLPQLEDREVIEMLT 126
Query: 252 MVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPY 311
V GIG W+ MF+IFSL R +VL + D+G+ +G + LYS E + + Q +KW PY
Sbjct: 127 KVKGIGQWTAEMFLIFSLGRMNVLSLGDVGLVRGARWLYSEEHKKDGNPLAQHAQKWSPY 186
Query: 312 RSVASWYLWRFVEAKGAPSSAAAV 335
SVAS YLW V +G S V
Sbjct: 187 CSVASLYLWEAVN-RGYVDSGKTV 209
>gi|374262978|ref|ZP_09621537.1| hypothetical protein LDG_7976 [Legionella drancourtii LLAP12]
gi|363536636|gb|EHL30071.1| hypothetical protein LDG_7976 [Legionella drancourtii LLAP12]
Length = 207
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/165 (39%), Positives = 98/165 (59%), Gaps = 5/165 (3%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R+I YQQL +A +I RF+A+ + +PE +LA + LRQ G S RK
Sbjct: 44 PYEALIRAIAYQQLHGRAAEAILNRFLAIYPEHSFPLPEEILATESELLRQCGFSARKLE 103
Query: 220 YLHDLARKYQNG---ILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLP 276
+ LA G L + +++ +D L LT++ GIG W+V M +IF+L R D+LP
Sbjct: 104 TIKRLAEASLIGHVPTLEKAKLMSTED--LIKELTLLPGIGPWTVEMLLIFTLGRMDILP 161
Query: 277 INDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
+D GVR+G + + L + P P ++ ++ W PYRS+A+WYLWR
Sbjct: 162 AHDFGVREGYKKMKDLPQQPTPKELAKIGATWSPYRSIAAWYLWR 206
>gi|299065820|emb|CBJ36998.1| na-3-methyladenine glycosylase protein [Ralstonia solanacearum
CMR15]
Length = 213
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 95/165 (57%), Gaps = 3/165 (1%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R+I YQQL +AG +I R +AL G P +L LR G S K +
Sbjct: 47 PYEALVRAIAYQQLHARAGDAILGRLLALYPGAGFPSPGQLLDTDAATLRGCGFSATKLA 106
Query: 220 YLHDLARKYQNGIL--SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPI 277
+ +A+ +G++ D A+ + D++L L + G+G W+V M +I++L R D+LP
Sbjct: 107 TIRGIAQATLDGVVPTRDQALA-LPDEALIERLVTLRGVGRWTVEMLLIYTLERADILPA 165
Query: 278 NDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRF 322
+D GVR+G + L LE P QM ++ WRPYR++A+WYLWR
Sbjct: 166 DDFGVREGYRRLKHLETAPTRRQMTEIGRAWRPYRTIAAWYLWRM 210
>gi|448358499|ref|ZP_21547180.1| HhH-GPD family protein [Natrialba chahannaoensis JCM 10990]
gi|445645852|gb|ELY98847.1| HhH-GPD family protein [Natrialba chahannaoensis JCM 10990]
Length = 209
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 108/192 (56%), Gaps = 5/192 (2%)
Query: 138 ADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVP 197
AD + L+D H P + T + L SI+ QQL+ + ++ R + E V P
Sbjct: 11 ADPIMDRLVDAHNPYVEPDW-TEYERLCISIINQQLSTASAAAVRERVFDVLEDE--VTP 67
Query: 198 ETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIG 257
+TVLA Q LR G+S K Y+ + AR +Q + + + +D+ + LT + GIG
Sbjct: 68 KTVLAADDQALRDAGLSRSKIEYIRNAARAFQEEDFTRTGLSGVDNDEVVDRLTEIKGIG 127
Query: 258 SWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLY-SLEELPRPSQMDQLCEKWRPYRSVAS 316
W+ M+ +F L RPD+LP+ DL VR+G++ LY + +EL R ++M + + WRPYRSVA+
Sbjct: 128 EWTARMYCLFVLKRPDILPLGDLAVRRGIEQLYGNGDELTR-AEMRDIADSWRPYRSVAT 186
Query: 317 WYLWRFVEAKGA 328
Y+W EA +
Sbjct: 187 RYIWAEYEADSS 198
>gi|71731053|gb|EAO33121.1| HhH-GPD [Xylella fastidiosa Ann-1]
Length = 226
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 113/209 (54%), Gaps = 9/209 (4%)
Query: 127 EVEAAIRHLRNADRQLASLID-IHPPPTFDSFHTPF---LALTRSILYQQLAFKAGTSIY 182
+V AA +L + D L+ + + P P + PF AL R+IL+QQL+ KA ++I
Sbjct: 9 DVMAAYDYLYHCDPGLSGWMQRLGPLPALRRWRQPFNVVDALARAILFQQLSGKAASTIV 68
Query: 183 TRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGIL-SDSAIVNM 241
R A+ G + ET+ + LR GVS K L DL R+ G L S + +M
Sbjct: 69 ARIEAVIGSTC-LYAETLACIDDACLRACGVSSNKILALRDLTRREVAGELPSVWQMGSM 127
Query: 242 DDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQM 301
++ L + GIG W+V M +IF L RPDVLP++DLGVRKG+Q + SL +P P +
Sbjct: 128 HHNTIVEKLIPIRGIGRWTVEMMLIFRLGRPDVLPVDDLGVRKGIQRVDSLAFVPTPKAL 187
Query: 302 DQLCEKWRPYRSVASWYLWR---FVEAKG 327
E W PYR+ A YLWR F E +G
Sbjct: 188 CTRGECWAPYRTYAGLYLWRIADFHEGEG 216
>gi|448374102|ref|ZP_21557987.1| HhH-GPD family protein [Halovivax asiaticus JCM 14624]
gi|445660779|gb|ELZ13574.1| HhH-GPD family protein [Halovivax asiaticus JCM 14624]
Length = 198
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 103/186 (55%), Gaps = 4/186 (2%)
Query: 135 LRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAG 194
LRN D +A L++ + P T ++ F L SI+ QQL+ + +I R + G E
Sbjct: 10 LRN-DPVMAELVETYDPYT-ETEWDEFERLCVSIINQQLSTASANAIRERVYGVLGDE-- 65
Query: 195 VVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVN 254
+ P+ VL+ Q L G+SG K YL + AR + L+ S + + + + LT +
Sbjct: 66 ITPDRVLSTADQPLLDAGLSGTKVEYLRNAARAFDENDLTRSGLADHSNDEVVDTLTEIK 125
Query: 255 GIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSV 314
GIG W+ M+++F L RPDVLP+ DL +R G+Q LY E ++M + + WRPYRSV
Sbjct: 126 GIGEWTAEMYLLFVLERPDVLPLGDLAIRNGIQQLYGDGEKMTRAEMRTVADPWRPYRSV 185
Query: 315 ASWYLW 320
+ Y+W
Sbjct: 186 GTRYIW 191
>gi|120610993|ref|YP_970671.1| HhH-GPD family protein [Acidovorax citrulli AAC00-1]
gi|120589457|gb|ABM32897.1| HhH-GPD family protein [Acidovorax citrulli AAC00-1]
Length = 219
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 111/208 (53%), Gaps = 13/208 (6%)
Query: 119 ARPLSSEGEVEAAIRHLRNADRQLASLI----DIHPPPTFDSFHTPFLALTRSILYQQLA 174
A P ++ G A RHL DR + LI D+ D+F T L RSI+ QQ++
Sbjct: 11 AEPSTAPGYWADACRHLVKKDRVMKRLIPQLGDVALVARGDAFTT----LARSIVGQQVS 66
Query: 175 FKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILS 234
+ ++ RF AL + P VL L +R G+S RK YL DLA + G L
Sbjct: 67 VASAQKVWDRFAAL---PRSMTPAAVLKLKVDDMRAAGLSARKVDYLVDLALHFDTGRLH 123
Query: 235 DSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV-QLLYSLE 293
MDD+++ L + GIG W+ MF+IF L RP+VLP++D + +G+ Q +S +
Sbjct: 124 VKDWDAMDDEAIAAELVAIRGIGRWTADMFLIFHLARPNVLPLDDATLLQGISQHYFSGD 183
Query: 294 ELPRPSQMDQLCEKWRPYRSVASWYLWR 321
+ R S ++ E W+P+ SVASWY+WR
Sbjct: 184 PVSR-SDAREVAEAWKPWCSVASWYIWR 210
>gi|320588666|gb|EFX01134.1| DNA base-excision repair protein [Grosmannia clavigera kw1407]
Length = 394
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 141/310 (45%), Gaps = 48/310 (15%)
Query: 49 THANVTPQTSSPPSKIPLRPR--KIRKLSPDNGVDQASSSQPTESSKATSAKSTKSR--- 103
T+A+VT + PS +PR + +L+ + S T S +KSR
Sbjct: 85 TNASVTSTATDSPSTPRTKPRHATVSRLADPKATNAPLLSPETSRLIVVSRFDSKSRSLA 144
Query: 104 ---AIQQQQQTLTVPRIIARPLSSEGEVEAAIRHLRNADRQLASLIDIH-----PPPTFD 155
AI QQ ++++ ++ A HL D ++ LID+H P +
Sbjct: 145 AGEAIDDSQQ-----------ITTDNILQVACEHLIAVDPRMKPLIDMHYCAAFSPESLA 193
Query: 156 SFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL------CGGEAGVV-------PETVLA 202
PF +L SI+ QQ++ A +I RFIAL GGEA V P V
Sbjct: 194 KKVDPFESLASSIISQQVSGAAAKAIKGRFIALFSDPGGTGGEAEVAVPVRFPHPSQVAV 253
Query: 203 LTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVH 262
+ +LR G+S RKA Y+ LA K+ +G LS + ++L L V G+G WSV
Sbjct: 254 MPLDRLRTAGLSQRKAEYVQGLAEKFASGELSAQLLAEAPYETLVERLVAVRGLGLWSVE 313
Query: 263 MFMIFSLHRPDVLPINDLGVRKGVQLLYSLE-----------ELPRPSQMDQLCEKWRPY 311
MF +F L R DV + DLGV++G+ + + ++M + E +RPY
Sbjct: 314 MFAMFGLKRMDVFSVGDLGVQRGMAAFAGRNVAKLKSGKGKWKYMKDTEMQTIAEPFRPY 373
Query: 312 RSVASWYLWR 321
RSV WY+WR
Sbjct: 374 RSVFMWYMWR 383
>gi|386084659|ref|YP_006000941.1| DNA-3-methyladenine glycosylase [Xylella fastidiosa subsp.
fastidiosa GB514]
gi|307579606|gb|ADN63575.1| DNA-3-methyladenine glycosylase [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 232
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 110/203 (54%), Gaps = 6/203 (2%)
Query: 127 EVEAAIRHLRNADRQLASLID-IHPPPTFDSFHTPF---LALTRSILYQQLAFKAGTSIY 182
+V AA +L + D L+ + + P P + PF AL R+IL+QQL+ KA ++I
Sbjct: 15 DVMAAYDYLYHCDPGLSGWMQRLGPLPALRRWRQPFNVVDALARAILFQQLSGKAASTIV 74
Query: 183 TRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGIL-SDSAIVNM 241
R A+ G + ET+ + LR GVS K L DL R+ G L S + +M
Sbjct: 75 ARIEAVIGSTC-LYAETLACIDDACLRACGVSSNKILALRDLTRREVAGELPSVWQMGSM 133
Query: 242 DDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQM 301
++ L + GIG W+V M +IF L RPDVLP++DLGVRKG+Q + SL +P P +
Sbjct: 134 HHNTIVEKLIPIRGIGRWTVEMMLIFRLGRPDVLPVDDLGVRKGIQRVDSLAFVPTPKAL 193
Query: 302 DQLCEKWRPYRSVASWYLWRFVE 324
E W PYR+ A YLWR +
Sbjct: 194 CTRGECWAPYRTYAGLYLWRIAD 216
>gi|221198381|ref|ZP_03571427.1| HhH-GPD family protein [Burkholderia multivorans CGD2M]
gi|221208942|ref|ZP_03581939.1| HhH-GPD family protein [Burkholderia multivorans CGD2]
gi|221171225|gb|EEE03675.1| HhH-GPD family protein [Burkholderia multivorans CGD2]
gi|221182313|gb|EEE14714.1| HhH-GPD family protein [Burkholderia multivorans CGD2M]
Length = 293
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 107/197 (54%), Gaps = 3/197 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P F+ L RS++ QQ++ + S++ R A
Sbjct: 95 DKACADLVKRDRILKKLIPKFGPAHLVKRGDSFVTLARSVVGQQISVPSAQSLWARIQAA 154
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C + P+ V+ L +L G+S RK Y+ DLA+ + +G L +M+D+++
Sbjct: 155 C---PKLAPQPVIRLGADKLIACGLSKRKTEYILDLAQHFVSGALHVDKWTSMEDEAVIA 211
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GI W+ MF+IF+L RPDVLP++D G+ + + + Y E S+ ++ W
Sbjct: 212 ELTQIRGISRWTAEMFLIFNLSRPDVLPLDDPGLIRAISVNYFSGEPVTRSEAREVAANW 271
Query: 309 RPYRSVASWYLWRFVEA 325
P+R+VA+WY+WR ++A
Sbjct: 272 EPWRTVATWYMWRSLDA 288
>gi|448729296|ref|ZP_21711613.1| HhH-GPD family protein [Halococcus saccharolyticus DSM 5350]
gi|445795243|gb|EMA45772.1| HhH-GPD family protein [Halococcus saccharolyticus DSM 5350]
Length = 187
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 101/184 (54%), Gaps = 6/184 (3%)
Query: 142 LASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVL 201
+A LID P + F L +I+ Q ++ + T++ R L V PE +L
Sbjct: 10 MAELIDEFGPLELEPADNEFRRLVVTIINQSISTASATAVRERVFDLFDE---VTPEAIL 66
Query: 202 ALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSV 261
A P LR G+ K Y+ + AR +Q L+ + + + D+++ LT + G+G+W+
Sbjct: 67 AADPDALRDAGLGETKTEYVRNAARAFQEHDLTRAGLADESDEAVIDHLTEIRGVGAWTG 126
Query: 262 HMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
M++IF L R DV PI DL VR+G++ LY E+ R +M L E+WRPYRS+A+ YLW
Sbjct: 127 RMYLIFVLGREDVFPIGDLAVRRGIESLYG--EMTR-EEMHDLAERWRPYRSIATRYLWA 183
Query: 322 FVEA 325
E+
Sbjct: 184 HYES 187
>gi|448382353|ref|ZP_21562068.1| HhH-GPD family protein [Haloterrigena thermotolerans DSM 11522]
gi|445661952|gb|ELZ14729.1| HhH-GPD family protein [Haloterrigena thermotolerans DSM 11522]
Length = 196
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 108/187 (57%), Gaps = 11/187 (5%)
Query: 138 ADRQLASLIDIHPP---PTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAG 194
AD +A L+D H P P + + L SI+ QQL+ + ++ R + GE
Sbjct: 11 ADPVMAGLLDRHDPYVEPDWSEYER----LCISIINQQLSTASAAAVRERVFEVLEGE-- 64
Query: 195 VVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVN 254
V PE+VLA LR G+S RK Y+ + A ++ + + + + + + +LT +
Sbjct: 65 VTPESVLAADEAALRDAGLSRRKVEYVRNAAHAFREADYTRAGLASYSNAEVVDLLTEIK 124
Query: 255 GIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYS-LEELPRPSQMDQLCEKWRPYRS 313
G+G W+ M+++F L RPDVLP+ DL VR+G++ LY+ EEL R ++M ++ + W+PYRS
Sbjct: 125 GVGEWTARMYLLFVLERPDVLPLGDLAVRRGIEQLYADGEELTR-AEMREIAKPWKPYRS 183
Query: 314 VASWYLW 320
VA+ Y+W
Sbjct: 184 VATRYIW 190
>gi|448321445|ref|ZP_21510922.1| HhH-GPD family protein [Natronococcus amylolyticus DSM 10524]
gi|445603280|gb|ELY57244.1| HhH-GPD family protein [Natronococcus amylolyticus DSM 10524]
Length = 183
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 110/187 (58%), Gaps = 6/187 (3%)
Query: 142 LASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVL 201
+A +++ H P + T + L SI+ QQ++ + +I R + GGE V PETVL
Sbjct: 1 MAEIVERHDPYEEPDW-TEYERLCISIINQQVSTASAAAIRERVFDVLGGE--VTPETVL 57
Query: 202 ALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSV 261
A L + G+S K Y+ + A ++ + S + + ++ + +LT + GIG W+
Sbjct: 58 AADEDALYEAGLSRSKIEYVRNAAEAFRANDYTRSGLADHTNEEVIDVLTEIKGIGDWTA 117
Query: 262 HMFMIFSLHRPDVLPINDLGVRKGVQLLYS--LEELPRPSQMDQLCEKWRPYRSVASWYL 319
M+++F L RPD+LP+ DL VR+G++ LY+ EEL R ++M ++ E WRP+RSVA+ Y+
Sbjct: 118 RMYLLFVLERPDILPLGDLAVRRGIENLYADDGEELTR-AEMREIAETWRPHRSVATRYI 176
Query: 320 WRFVEAK 326
W EA+
Sbjct: 177 WAEYEAE 183
>gi|451849396|gb|EMD62700.1| hypothetical protein COCSADRAFT_93648 [Cochliobolus sativus ND90Pr]
Length = 401
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 89/265 (33%), Positives = 130/265 (49%), Gaps = 30/265 (11%)
Query: 82 QASSSQPTESSKATSAKSTKSRAIQQQQQTLTVPRIIARPLSS---EGEVEAAIRHLRNA 138
QA S P + AT A+ K++ L P + A P +S + ++ A HL +
Sbjct: 136 QAYGSSPVKPEDATPARKRKAK-------ELVPPDVGAIPSASTNIDRLLKDAEAHLVSV 188
Query: 139 DRQLASLIDIH-----PPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEA 193
D +L +LI+ H P PF AL+ I+ QQ+ +A SI ++F L
Sbjct: 189 DPKLKTLIEKHHCKIFSPEGLREVVDPFTALSSGIIGQQVLPQAAASIRSKFTCLFPSTH 248
Query: 194 GVVPE--TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLT 251
P VLAL+ LR G+S RKA Y+H LA K+ +G LS +V+ D+ L L
Sbjct: 249 PSFPSPSQVLALSLPTLRTAGLSQRKAEYIHGLAEKFASGELSAEMLVSASDEELIEKLV 308
Query: 252 MVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPR----------PSQM 301
V G+G WSV MF F L R DV DLGV++G+ +Y+ ++ + S+
Sbjct: 309 AVRGLGRWSVEMFACFGLKRMDVFSTGDLGVQRGMA-VYAGRDVSKLKNKGGKWKYMSEQ 367
Query: 302 DQL--CEKWRPYRSVASWYLWRFVE 324
D L K+ PYRS+ WY+WR +
Sbjct: 368 DMLATAAKFSPYRSLLMWYMWRIAD 392
>gi|167586802|ref|ZP_02379190.1| HhH-GPD family protein [Burkholderia ubonensis Bu]
Length = 275
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 106/197 (53%), Gaps = 3/197 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR + LI P PF+ L RS++ QQ++ + S++ A
Sbjct: 77 DKACADLVKRDRIMKKLIPKFGPAHLVKRGDPFVTLARSVVGQQISVASAQSVWASIEA- 135
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
+ P+ V+ L P +L G+S RK Y+ D+A+ + +G L +MDD+ +
Sbjct: 136 --ASPKLAPQQVIKLGPDKLIACGLSKRKTEYILDVAQHFVSGALHVDKWTSMDDEDVIA 193
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GI W+ MF+IF+L RPDVLP++D G+ + + + Y E S+ ++ W
Sbjct: 194 ELTQIRGISRWTAEMFLIFNLSRPDVLPLDDPGLIRAISVNYFSGEPVTRSEAREVAANW 253
Query: 309 RPYRSVASWYLWRFVEA 325
P+R+VA+WY+WR +++
Sbjct: 254 EPWRTVATWYMWRSLDS 270
>gi|182681159|ref|YP_001829319.1| HhH-GPD family protein [Xylella fastidiosa M23]
gi|417559179|ref|ZP_12210132.1| 3-Methyladenine DNA glycosylase AlkA [Xylella fastidiosa EB92.1]
gi|182631269|gb|ACB92045.1| HhH-GPD family protein [Xylella fastidiosa M23]
gi|338178263|gb|EGO81255.1| 3-Methyladenine DNA glycosylase AlkA [Xylella fastidiosa EB92.1]
Length = 226
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 110/203 (54%), Gaps = 6/203 (2%)
Query: 127 EVEAAIRHLRNADRQLASLID-IHPPPTFDSFHTPF---LALTRSILYQQLAFKAGTSIY 182
+V AA +L + D L+ + + P P + PF AL R+IL+QQL+ KA ++I
Sbjct: 9 DVMAAYDYLYHCDPGLSGWMQRLGPLPALRRWRQPFNVVDALARAILFQQLSGKAASTIV 68
Query: 183 TRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGIL-SDSAIVNM 241
R A+ G + ET+ + LR GVS K L DL R+ G L S + +M
Sbjct: 69 ARIEAVIGSTC-LYAETLACIDDACLRACGVSSNKILALRDLTRREVAGELPSVWQMGSM 127
Query: 242 DDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQM 301
++ L + GIG W+V M +IF L RPDVLP++DLGVRKG+Q + SL +P P +
Sbjct: 128 HHNTIVEKLIPIRGIGRWTVEMMLIFRLGRPDVLPVDDLGVRKGIQRVDSLAFVPTPKAL 187
Query: 302 DQLCEKWRPYRSVASWYLWRFVE 324
E W PYR+ A YLWR +
Sbjct: 188 CTRGECWAPYRTYAGLYLWRIAD 210
>gi|307129702|ref|YP_003881718.1| DNA-3-methyladenine glycosylase II [Dickeya dadantii 3937]
gi|306527231|gb|ADM97161.1| DNA-3-methyladenine glycosylase II [Dickeya dadantii 3937]
Length = 224
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 110/197 (55%), Gaps = 5/197 (2%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDS--FHTPFLALTRSILYQQLAFKAGTSIYTRFI-A 187
A+ HL D A LID F+S P+ AL R++ QQL+ +A +I +
Sbjct: 13 ALAHLAAIDAHWARLIDGVGHIRFESRPAREPYDALIRAVASQQLSNRAAAAIIGKLQQR 72
Query: 188 LCGGEAGVVPETVLA-LTPQQLRQIGVSGRKASYLHDLARKYQNGIL-SDSAIVNMDDKS 245
GE G LA P+ LRQ G S RK + +A+ QNG++ S + ++DD++
Sbjct: 73 FAVGENGFPSADQLATCEPEVLRQCGFSARKIDTVKGIAQGVQNGLVPSRAEAEHLDDET 132
Query: 246 LFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLC 305
L L + GIG W+V M +I +L R D++P++DLG+++G + LY L + P M ++
Sbjct: 133 LIERLCTLKGIGRWTVEMLLISTLERMDIMPVDDLGIKQGFRYLYRLPQDPTRKAMLEMS 192
Query: 306 EKWRPYRSVASWYLWRF 322
E RPYR++A+WYLWR
Sbjct: 193 EACRPYRTLAAWYLWRI 209
>gi|449546842|gb|EMD37811.1| hypothetical protein CERSUDRAFT_114463 [Ceriporiopsis subvermispora
B]
Length = 449
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/241 (34%), Positives = 119/241 (49%), Gaps = 47/241 (19%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFH--TPFLALTRSILYQQLAFKAGTSIYTRFI 186
E A +HL + DR+ + D F+ PF LT SIL QQ++++A SI RFI
Sbjct: 113 EDAKKHLISVDRRFKDIFDRLKCRPFEHLERVDPFRTLTDSILGQQISWRAARSIRHRFI 172
Query: 187 ALCGGEAGVVPET---------------VLALTPQQLRQIGVSGRKASYLHDLARKYQNG 231
L +PE V ++ LR G+SGRKA Y+ DLA ++ +G
Sbjct: 173 RLFDPS---LPEQLEDHQTIDFFPTAQQVASIDSATLRTAGLSGRKAEYVLDLASRFADG 229
Query: 232 ILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLY- 290
LS ++ D++ L+ MLT V GIG+W+V MF IFSL RPD+LP+ DLGV++G+ +
Sbjct: 230 RLSTQKLLEADEEELYRMLTEVRGIGNWTVDMFAIFSLRRPDILPVGDLGVQRGILRWFL 289
Query: 291 -----------SLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAKGAPSSAAAVAAGA 339
S ++LP+PS + +K VE GA + AAG
Sbjct: 290 SLHDPSYLVNISPQKLPKPSSDEGQGDK---------------VEQDGAADESEPAAAGP 334
Query: 340 A 340
A
Sbjct: 335 A 335
>gi|334131394|ref|ZP_08505158.1| DNA-3-methyladenine glycosylase 1 [Methyloversatilis universalis
FAM5]
gi|333443561|gb|EGK71524.1| DNA-3-methyladenine glycosylase 1 [Methyloversatilis universalis
FAM5]
Length = 207
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 98/163 (60%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R++ YQQL+ +AG ++ RF+AL G A P+ V + LR G SGRKA
Sbjct: 40 PWQALLRAVAYQQLSVRAGDTMIARFLALYGDVAFPSPQQVCDTPVEALRACGFSGRKAD 99
Query: 220 YLHDLARKYQNGIL-SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
L +A +G + S + + + D +L LT ++GIG W+V M +I++L R D+LP +
Sbjct: 100 TLRAIAAAALDGTVPSLAEALTLGDDALVARLTPLHGIGRWTVDMMLIYTLGRTDLLPAD 159
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
DLGVR G + L L+ P P QM L W P+R+ ASWYLWR
Sbjct: 160 DLGVRDGYRRLRRLDRPPTPRQMSALALPWSPHRTAASWYLWR 202
>gi|300311196|ref|YP_003775288.1| 3-methyladenine DNA glycosylase [Herbaspirillum seropedicae SmR1]
gi|300073981|gb|ADJ63380.1| 3-methyl-adenine DNA glycosylase II protein [Herbaspirillum
seropedicae SmR1]
Length = 219
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 106/197 (53%), Gaps = 11/197 (5%)
Query: 129 EAAIRHLRNADRQLASLI----DIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTR 184
E A L DR + +I D+ D+F T L RS++ QQ++ KA +++ R
Sbjct: 21 EEAKAELMKRDRIMRKIIPQFGDLQLTVRGDAFTT----LARSVIGQQISTKAANAVWQR 76
Query: 185 FIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDK 244
F+ C P V+ P+ L G+S RKA Y+ DLA ++ + M+D+
Sbjct: 77 FLEAC---PRCTPGQVIRTGPEGLAGCGLSKRKAEYILDLAAHFKAKTVHPDKWAEMEDE 133
Query: 245 SLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQL 304
++ + + GIG W+ MF+IF+L RP+VLP++DLG+ KG+ + Y E S ++
Sbjct: 134 AVIAEMIQIRGIGRWTAEMFLIFNLLRPNVLPLDDLGLLKGISISYFSGEPVSRSDAREV 193
Query: 305 CEKWRPYRSVASWYLWR 321
W P+R+VA+WYLWR
Sbjct: 194 AANWEPWRTVATWYLWR 210
>gi|89900144|ref|YP_522615.1| HhH-GPD [Rhodoferax ferrireducens T118]
gi|89344881|gb|ABD69084.1| HhH-GPD [Rhodoferax ferrireducens T118]
Length = 216
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 100/191 (52%), Gaps = 3/191 (1%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A +HL DR + LI + F+ L RS++ QQ++ KA +++ RF L
Sbjct: 20 ACKHLMKKDRVMKRLIPQFGDACLQTRGDAFVTLARSVVGQQISVKAAQTVWNRFALL-- 77
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
+ VL L +R G+S RK YL DLA + +G + MDD+++ L
Sbjct: 78 -PKKITAANVLKLKVDDMRAAGLSVRKVEYLVDLALHFDSGTVHVETWETMDDEAIIAEL 136
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRP 310
+ GIG W+ MF+IF L RP+VLP++D+G+ G+ Y ++ S ++ W P
Sbjct: 137 IAIRGIGRWTAEMFLIFHLMRPNVLPLDDVGLINGISKNYFSGDVVSRSDAREVAAAWAP 196
Query: 311 YRSVASWYLWR 321
Y SVA+WY+WR
Sbjct: 197 YCSVATWYIWR 207
>gi|134094512|ref|YP_001099587.1| DNA-3-methyladenine glycosylase II [Herminiimonas arsenicoxydans]
Length = 191
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 106/197 (53%), Gaps = 14/197 (7%)
Query: 139 DRQLASLIDIHPPPTFDSFHT-----PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEA 193
DR + LI P F H PF L RSI+ QQ++ KA S++ RF+ +C
Sbjct: 4 DRIMRKLI-----PQFGDLHLASRGEPFSTLARSIIGQQISVKAADSVWQRFLEIC---P 55
Query: 194 GVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMV 253
P V+ +L G+S RK+ Y+ DLA ++ ++ M+D+ + L +
Sbjct: 56 KCTPVQVIK-AGDKLASCGLSKRKSEYILDLADHFKAKRVNCDKWAEMEDEDVIADLIQI 114
Query: 254 NGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRS 313
GIG W+ MF+IF+L RP++LP++D+G+ G+ Y E S ++ W PYR+
Sbjct: 115 RGIGRWTAEMFLIFNLLRPNILPLDDVGLLAGISRNYFSGEPVSRSDAREVAANWEPYRT 174
Query: 314 VASWYLWRFVEAKGAPS 330
VA+WYLWR ++A AP+
Sbjct: 175 VATWYLWRSLDAVSAPA 191
>gi|67528382|ref|XP_661993.1| hypothetical protein AN4389.2 [Aspergillus nidulans FGSC A4]
gi|40741116|gb|EAA60306.1| hypothetical protein AN4389.2 [Aspergillus nidulans FGSC A4]
gi|259482800|tpe|CBF77626.1| TPA: DNA-3-methyladenine glycosylase, putative (AFU_orthologue;
AFUA_4G06800) [Aspergillus nidulans FGSC A4]
Length = 391
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 112/232 (48%), Gaps = 27/232 (11%)
Query: 120 RPLSSEGEV-EAAIRHLRNADRQLASLIDIH-----PPPTFDSFHTPFLALTRSILYQQL 173
RP ++ G + E A HL D +L LI H P PF +L +I+ QQ+
Sbjct: 152 RPTATTGTLLEKATAHLIATDPRLEPLIKAHHCSLFSPEGLAEKIDPFRSLVGTIIGQQV 211
Query: 174 AFKAGTSIYTRFIALCGG-----EAGV---------------VPETVLALTPQQLRQIGV 213
+ A SI +F+AL G E G PE ++ + LR G+
Sbjct: 212 SGAAARSIREKFVALLWGLNHTYENGDEVQRDREDENEGYFPTPEEIVRVDIPTLRTAGL 271
Query: 214 SGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPD 273
S RKA Y+H LA K+ +G LS + ++N D+ L LT V G+G WSV MF F+L R D
Sbjct: 272 SQRKAEYIHGLAEKFASGELSATMLLNASDEELLEKLTAVRGLGRWSVEMFACFTLKRTD 331
Query: 274 VLPINDLGVRKGVQLLYSLE-ELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
V DLGV++G + + +M L K+ PYRS+ WY+WR E
Sbjct: 332 VFSTGDLGVQRGCAAFMGKDFKYMSEKEMLDLAAKFAPYRSLFMWYMWRVEE 383
>gi|452984188|gb|EME83945.1| hypothetical protein MYCFIDRAFT_135013 [Pseudocercospora fijiensis
CIRAD86]
Length = 300
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 111/215 (51%), Gaps = 21/215 (9%)
Query: 128 VEAAIRHLRNADRQLASLIDIH-----PPPTFDSFHTPFLALTRSILYQQLAFKAGTSIY 182
++ A +HL + D +L +I+ H P PF +LT I+ QQ++ A SI
Sbjct: 67 LDDACKHLISVDEKLRPVIEKHYCRIFSPEGLAEQIDPFRSLTSGIMAQQVSGAAAKSIK 126
Query: 183 TRFIALCGGEA---GVVPETVLALTP-QQLRQIGVSGRKASYLHDLARKYQNGILSDSAI 238
+FI+L EA G P +++A T LR G+S RKA Y+ LA+K+ +G LS +
Sbjct: 127 NKFISLFPAEACPNGFPPPSIVAKTDIATLRTAGLSQRKAEYIQGLAQKFHSGELSAKML 186
Query: 239 VNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLE----- 293
+ D+ + L V G+G+WSV MFM F L R D+ DLGV++G+ +
Sbjct: 187 MEGSDEEVMEKLVAVRGLGAWSVEMFMCFGLKRMDIFSTGDLGVQRGMSAFVGRDVAKLK 246
Query: 294 -------ELPRPSQMDQLCEKWRPYRSVASWYLWR 321
+ M ++ EK+RPYRS+ WY+WR
Sbjct: 247 AKGGGKWKYMSEKDMLEISEKFRPYRSLFMWYMWR 281
>gi|425899097|ref|ZP_18875688.1| DNA-3-methyladenine glycosylase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397889777|gb|EJL06259.1| DNA-3-methyladenine glycosylase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 204
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 96/163 (58%), Gaps = 2/163 (1%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P AL R+I YQQL +AG +I RF+ L G + P +LA + LR G S K +
Sbjct: 39 PCEALVRAIAYQQLHARAGDAILGRFLGLYG-QTFPSPGQILATDFEPLRACGFSAGKIA 97
Query: 220 YLHDLARKYQNGILSDSAIV-NMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A +G++ D MDD++L LT + GIG W+V M +I+SL R D+LP +
Sbjct: 98 TIRGIAEATLSGVVPDYQTAQTMDDEALIERLTRLRGIGRWTVEMLLIYSLERLDILPAD 157
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GVR+G + L LE+ P QM ++ RP+R+VA+WYLWR
Sbjct: 158 DFGVREGYRRLKGLEQQPTRKQMIEIGLSLRPHRTVAAWYLWR 200
>gi|291296708|ref|YP_003508106.1| HhH-GPD family protein [Meiothermus ruber DSM 1279]
gi|290471667|gb|ADD29086.1| HhH-GPD family protein [Meiothermus ruber DSM 1279]
Length = 195
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 98/166 (59%), Gaps = 9/166 (5%)
Query: 159 TPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKA 218
P+ L SI+ QQL+ KA +I+ R + E PE + + LR +G+S KA
Sbjct: 39 APYEVLLSSIVGQQLSGKAADTIWRRLSSRFALE----PEVLYRAALEDLRAVGLSSAKA 94
Query: 219 SYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
Y+ DL+R G L + + D++L LT V GIG W+V MF++F L RPDV P+
Sbjct: 95 RYVQDLSRFALEGGLQ--GLEHHSDEALIAHLTQVKGIGVWTVQMFLMFGLGRPDVWPVL 152
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
DLG+RKG Q LY + E +++ L E++RPYRS A+WYLWR +E
Sbjct: 153 DLGIRKGAQKLYGVIE---RDELEALGERFRPYRSHAAWYLWRALE 195
>gi|448414239|ref|ZP_21577378.1| DNA-3-methyladenine glycosylase ii [Halosarcina pallida JCM 14848]
gi|445682532|gb|ELZ34949.1| DNA-3-methyladenine glycosylase ii [Halosarcina pallida JCM 14848]
Length = 187
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 106/190 (55%), Gaps = 6/190 (3%)
Query: 135 LRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAG 194
+RN DR LA L++ H + F SI+ QQL+ ++ +I R
Sbjct: 4 IRNDDR-LAELVEEHGELAVEPAQDEFERFVVSIVNQQLSTQSAAAIRDRLFERFE---- 58
Query: 195 VVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVN 254
V PE +LA LR +G+S +K SY+ +A ++ L+ + ++ D+ + LT +
Sbjct: 59 VTPEAMLAAEEDALRDVGLSSQKISYVRSVATAFRKEDLTREGLAHLTDEEVVERLTEIR 118
Query: 255 GIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSV 314
G+G W+ M+++F L R DV P+ DLG+RK + LY ++E R + +++ E WRP+R++
Sbjct: 119 GVGDWTAKMYLMFVLGREDVFPVEDLGIRKAMAELYGIDEDDRAAMVER-AETWRPHRTL 177
Query: 315 ASWYLWRFVE 324
AS YLWR V+
Sbjct: 178 ASRYLWRSVD 187
>gi|383765668|ref|YP_005444649.1| DNA-3-methyladenine glycosylase II [Phycisphaera mikurensis NBRC
102666]
gi|381385936|dbj|BAM02752.1| DNA-3-methyladenine glycosylase II [Phycisphaera mikurensis NBRC
102666]
Length = 249
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 101/202 (50%), Gaps = 10/202 (4%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+A R LR D L LI PP F F L R++ QQL+ K +++ RF A
Sbjct: 10 DAGTRALRT-DPHLGPLIASAPPCPFAPERGVFRRLARAVFAQQLSAKGAATLFARFEAH 68
Query: 189 CGGEAGVVPETVLA------LTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMD 242
G P +VLA L LR G+S +K SYL DLA + G L + M
Sbjct: 69 AGR---ATPASVLAACRDGSLDDDTLRFCGLSRQKKSYLVDLAEHFAGGRLDARKLNRMG 125
Query: 243 DKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMD 302
D LT V G+G W+ M++IF RPDV P++DL +R + L + P +
Sbjct: 126 DDEAVAALTAVRGVGRWTAQMWLIFGAARPDVWPVDDLAIRIATGRVLGLAQRPTARETA 185
Query: 303 QLCEKWRPYRSVASWYLWRFVE 324
+ E+WRP+R++A+W LWR ++
Sbjct: 186 AIGERWRPHRTLAAWLLWRSLD 207
>gi|409400533|ref|ZP_11250573.1| DNA-3-methyladenine glycosylase II [Acidocella sp. MX-AZ02]
gi|409130513|gb|EKN00275.1| DNA-3-methyladenine glycosylase II [Acidocella sp. MX-AZ02]
Length = 211
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 111/203 (54%), Gaps = 8/203 (3%)
Query: 134 HLRNADRQLASLID-IHPPPTFDSFHTP-FLALTRSILYQQLAFKAGTSIYTRFIALCGG 191
HL AD +L LI + P + H + AL +I +QQL KA SI R + CG
Sbjct: 7 HLSKADPRLGDLIKRLGKLPRVNPEHKELYHALFSAIAHQQLHAKAAQSILGRLRSACGE 66
Query: 192 EAGVVPE--TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGIL-SDSAIVNMDDKSLFT 248
+P+ T+LAL LR G SG K + L D+A K +G + S + D+ L
Sbjct: 67 ---TLPDSATLLALPDSTLRACGFSGSKVAALRDVAAKAADGTIPSHRVAKTLTDEELIA 123
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
L + G+G W+V M +IF+L RPD+ P++D GVR+G ++L+ L+ P+P ++ + +
Sbjct: 124 RLITIRGVGRWTVEMILIFTLERPDIFPVDDFGVREGYRILHGLDAQPKPKAFIEIGKAY 183
Query: 309 RPYRSVASWYLWRFVEAKGAPSS 331
P+R++A+ YLWR + P +
Sbjct: 184 APHRTLAARYLWRAADELKKPGT 206
>gi|326317610|ref|YP_004235282.1| HhH-GPD family protein [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323374446|gb|ADX46715.1| HhH-GPD family protein [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 219
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 111/208 (53%), Gaps = 13/208 (6%)
Query: 119 ARPLSSEGEVEAAIRHLRNADRQLASLI----DIHPPPTFDSFHTPFLALTRSILYQQLA 174
A P ++ G A RHL DR + LI D+ D+F T L RSI+ QQ++
Sbjct: 11 AEPSTAPGYWADACRHLVKKDRVMKRLIPQLGDVALVARGDAFTT----LARSIVGQQVS 66
Query: 175 FKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILS 234
+ ++ +F AL + P VL L +R G+S RK YL DLA + G L
Sbjct: 67 VASAQKVWDKFAAL---PRSMTPAAVLKLKVDDMRAAGLSARKVDYLVDLALHFDTGRLH 123
Query: 235 DSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV-QLLYSLE 293
MDD+++ L + GIG W+ MF+IF L RP+VLP++D + +G+ Q +S +
Sbjct: 124 VKDWDAMDDEAIAAELVAIRGIGRWTADMFLIFHLARPNVLPLDDATLLQGISQHYFSGD 183
Query: 294 ELPRPSQMDQLCEKWRPYRSVASWYLWR 321
+ R S ++ E W+P+ SVASWY+WR
Sbjct: 184 PVSR-SDAREVAEAWKPWCSVASWYIWR 210
>gi|325108445|ref|YP_004269513.1| HhH-GPD family protein [Planctomyces brasiliensis DSM 5305]
gi|324968713|gb|ADY59491.1| HhH-GPD family protein [Planctomyces brasiliensis DSM 5305]
Length = 228
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 105/208 (50%), Gaps = 7/208 (3%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
E R+L D L+ +I T PF L R+I+ QQ++ A +I R L
Sbjct: 14 EQGRRYLAKQDSVLSPVIARVGACTLKPIRRPFAMLVRAIISQQISTAAARNIRQRVQRL 73
Query: 189 CGGEAGVVPETVLALTPQQ-LRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLF 247
G + T LA P + R G+S +K YL DL + + L S + M D+ +
Sbjct: 74 --STTGQLSLTGLAGLPDEAFRSAGISPQKLRYLRDLIHRCETNQLPLSRLSRMSDEDVI 131
Query: 248 TMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEE----LPRPSQMDQ 303
LT V GIG W+ HMF+IF L RPDVLP DLG++K V LY EE L + ++
Sbjct: 132 AALTEVKGIGVWTAHMFLIFCLGRPDVLPTGDLGIQKAVAQLYFPEEADVRLATLAHFEE 191
Query: 304 LCEKWRPYRSVASWYLWRFVEAKGAPSS 331
+ WRP+ SVASWY WR ++ P +
Sbjct: 192 ATQNWRPHASVASWYCWRSLDLNTGPDN 219
>gi|448352144|ref|ZP_21540936.1| HhH-GPD family protein [Natrialba taiwanensis DSM 12281]
gi|445631943|gb|ELY85167.1| HhH-GPD family protein [Natrialba taiwanensis DSM 12281]
Length = 209
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 106/188 (56%), Gaps = 5/188 (2%)
Query: 142 LASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVL 201
++ L++ H P + T + L SI+ QQL+ + ++ R L E V PETVL
Sbjct: 15 MSRLVETHDPYVKPN-QTEYERLCISIINQQLSTASAAAVRERVFDLLEDE--VTPETVL 71
Query: 202 ALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSV 261
+ LR G+S K Y+ + AR +Q + + ++ ++ + + LT + GIG W+
Sbjct: 72 TAEDRALRDAGLSRSKIEYVRNAARAFQEDDYTRDGLADVSNEDVVSRLTEIKGIGEWTA 131
Query: 262 HMFMIFSLHRPDVLPINDLGVRKGVQLLY-SLEELPRPSQMDQLCEKWRPYRSVASWYLW 320
M+++F L RPD+LP+ DL VR+G+ LY EL R ++M ++ E WRPYRS A+ Y+W
Sbjct: 132 RMYLLFVLERPDILPLGDLAVRRGIDELYGDGAELTR-AEMREIAEAWRPYRSAATRYIW 190
Query: 321 RFVEAKGA 328
EA+ +
Sbjct: 191 AEYEAESS 198
>gi|383622364|ref|ZP_09948770.1| HhH-GPD family protein [Halobiforma lacisalsi AJ5]
gi|448694730|ref|ZP_21697230.1| HhH-GPD family protein [Halobiforma lacisalsi AJ5]
gi|445785315|gb|EMA36110.1| HhH-GPD family protein [Halobiforma lacisalsi AJ5]
Length = 197
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 100/179 (55%), Gaps = 3/179 (1%)
Query: 142 LASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVL 201
+A L+D H P + T + L SI+ QQL+ + ++ R + E + P+ VL
Sbjct: 15 MADLLDRHDPYVEPDW-TEYERLCISIINQQLSTASAMAVRERVFDVLDDE--ITPDRVL 71
Query: 202 ALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSV 261
A LR G+S K Y+ + AR +Q + + + + D+ + LT + G+G W+
Sbjct: 72 AADDGALRDAGLSRSKIEYMRNAARAFQERDYTRAGLADHDNDEVIDRLTEIKGVGEWTA 131
Query: 262 HMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLW 320
M+++F L RPDVLP+ DL VR+G++ LY+ E +M ++ E WRPYRSVA+ Y+W
Sbjct: 132 RMYLLFVLERPDVLPLGDLAVRRGIEQLYANGEDLTRGEMREIAEAWRPYRSVATRYIW 190
>gi|435846543|ref|YP_007308793.1| HhH-GPD superfamily base excision DNA repair protein [Natronococcus
occultus SP4]
gi|433672811|gb|AGB37003.1| HhH-GPD superfamily base excision DNA repair protein [Natronococcus
occultus SP4]
Length = 196
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 103/183 (56%), Gaps = 11/183 (6%)
Query: 142 LASLIDIHPP---PTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPE 198
+A L+D H P P + + L SI+ QQ++ + +I R + GE V PE
Sbjct: 15 MAELVDRHDPYVEPDWSEYER----LCISIINQQVSTASAAAIRERVFDVLDGE--VTPE 68
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
+VLA LR G+S K Y+ + AR +Q + + + + + LT + GIG
Sbjct: 69 SVLAADEAALRDAGLSPSKVEYVRNAARAFQENDYTRAGFADQTNAEVVDALTEIRGIGE 128
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSL-EELPRPSQMDQLCEKWRPYRSVASW 317
W+ M+++F L RPD+LP+ DL VR+G++ LY+ +EL R ++M ++ WRPYRSVA+
Sbjct: 129 WTARMYLLFVLERPDILPLGDLAVRRGIENLYADGDELTR-AEMREIAADWRPYRSVATR 187
Query: 318 YLW 320
Y+W
Sbjct: 188 YIW 190
>gi|28198482|ref|NP_778796.1| DNA-3-methyladenine glycosidase [Xylella fastidiosa Temecula1]
gi|28056566|gb|AAO28445.1| DNA-3-methyladenine glycosidase [Xylella fastidiosa Temecula1]
Length = 216
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 108/200 (54%), Gaps = 6/200 (3%)
Query: 130 AAIRHLRNADRQLASLID-IHPPPTFDSFHTPF---LALTRSILYQQLAFKAGTSIYTRF 185
AA +L + D L+ + + P P + PF AL R+IL+QQL+ KA ++I R
Sbjct: 2 AAYDYLYHCDPGLSGWMQRLGPLPALRRWRQPFNVVDALARAILFQQLSGKAASTIVARI 61
Query: 186 IALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGIL-SDSAIVNMDDK 244
A+ G + ET+ + LR GVS K L DL R+ G L S + +M
Sbjct: 62 EAVIGSTC-LYAETLACIDDACLRACGVSSNKILALRDLTRREVAGELPSVWQMGSMHHN 120
Query: 245 SLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQL 304
++ L + GIG W+V M +IF L RPDVLP++DLGVRKG+Q + SL +P P +
Sbjct: 121 TIVEKLIPIRGIGRWTVEMMLIFRLGRPDVLPVDDLGVRKGIQRVDSLAFVPTPKALCTR 180
Query: 305 CEKWRPYRSVASWYLWRFVE 324
E W PYR+ A YLWR +
Sbjct: 181 GECWAPYRTYAGLYLWRIAD 200
>gi|319762812|ref|YP_004126749.1| DNA-3-methyladenine glycosylase ii [Alicycliphilus denitrificans
BC]
gi|330824892|ref|YP_004388195.1| DNA-3-methyladenine glycosylase II [Alicycliphilus denitrificans
K601]
gi|317117373|gb|ADU99861.1| DNA-3-methyladenine glycosylase II [Alicycliphilus denitrificans
BC]
gi|329310264|gb|AEB84679.1| DNA-3-methyladenine glycosylase II [Alicycliphilus denitrificans
K601]
Length = 215
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 104/195 (53%), Gaps = 11/195 (5%)
Query: 131 AIRHLRNADRQLASLI----DIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFI 186
A +HL DR + LI D+ P P D+F T L RSI+ QQ++ + ++ +F
Sbjct: 19 ACKHLTKRDRVMRRLIPQVGDVAPYPRGDAFST----LARSIVGQQVSVASAQRVWDQFA 74
Query: 187 ALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSL 246
AL + P +VL L +R G+S RK YL DLA + +G L MDD ++
Sbjct: 75 AL---PRSMTPRSVLKLKVDDMRAAGLSARKVEYLVDLALHFDSGQLHVKQWGQMDDAAI 131
Query: 247 FTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCE 306
L + GI W+ MF+IF L RP+VLP++D + +G+ Y + S ++ E
Sbjct: 132 VAELVAIRGISRWTADMFLIFHLARPNVLPLDDTTLIQGISRHYFSGDPVSRSDAREVAE 191
Query: 307 KWRPYRSVASWYLWR 321
W+P+ SVASWY+WR
Sbjct: 192 AWKPWCSVASWYIWR 206
>gi|351729460|ref|ZP_08947151.1| HhH-GPD family protein [Acidovorax radicis N35]
Length = 186
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 93/161 (57%), Gaps = 3/161 (1%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASY 220
F L RSI+ QQ++ KA +++ RF+AL + P +VL L +R G+S RK Y
Sbjct: 20 FTTLARSIVGQQVSVKAAQTVWERFVAL---PRSMKPASVLKLKIDDMRAAGLSARKVDY 76
Query: 221 LHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDL 280
L DLA ++ G L MDD+++ L + GIG W+ MF+IF L RP+VLP++D
Sbjct: 77 LVDLAIHFEEGKLHVKDWAAMDDEAIIAELVAIRGIGRWTAEMFLIFYLMRPNVLPLDDP 136
Query: 281 GVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
G+ G+ Y + S ++ E W+P+ SVA+WY+WR
Sbjct: 137 GLIAGISHNYFSGDPVSRSDAREVAEAWKPWSSVATWYIWR 177
>gi|152980259|ref|YP_001353797.1| DNA-3-methyladenine glycosylase II [Janthinobacterium sp.
Marseille]
gi|151280336|gb|ABR88746.1| DNA-3-methyladenine glycosylase II [Janthinobacterium sp.
Marseille]
Length = 215
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 105/197 (53%), Gaps = 12/197 (6%)
Query: 129 EAAIRHLRNADRQLASLI----DIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTR 184
E A L DR L LI D+H ++F T L RSI+ QQ++ KA S++ R
Sbjct: 18 EEAKAELMKRDRILRKLIPQFGDLHLVGRGEAFST----LARSIIGQQISTKAADSVWQR 73
Query: 185 FIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDK 244
F+ +C P V+ +L G+S RKA Y+ DLA ++ ++ M+D+
Sbjct: 74 FLEVC---PKCTPAQVIK-AGDKLATCGLSKRKAEYIFDLADHFKAKRVNCDKWAEMEDE 129
Query: 245 SLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQL 304
+ L + GIG W+ MF+IF+L RP++LP++DLG+ G+ Y E S ++
Sbjct: 130 EVIAELIQIRGIGRWTAEMFLIFNLLRPNILPLDDLGLLAGISRNYFSGEPVSRSDAREV 189
Query: 305 CEKWRPYRSVASWYLWR 321
W PYR+VA+WYLWR
Sbjct: 190 AANWEPYRTVATWYLWR 206
>gi|172061027|ref|YP_001808679.1| HhH-GPD family protein [Burkholderia ambifaria MC40-6]
gi|171993544|gb|ACB64463.1| HhH-GPD family protein [Burkholderia ambifaria MC40-6]
Length = 287
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 110/211 (52%), Gaps = 7/211 (3%)
Query: 118 IARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKA 177
+ARP + A L DR L LI P PF+ L RS++ QQ++ +
Sbjct: 83 VARP----AYWDKACADLVKRDRILKKLIPKFGPAHLVKRGDPFVTLARSVVGQQISVPS 138
Query: 178 GTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSA 237
+++ C + P+ V+ L +L G+S RK Y+ DLA+ + +G L
Sbjct: 139 AQALWACIEDAC---PKLAPQPVIRLGADKLIACGLSKRKTEYILDLAQHFVSGALHVDK 195
Query: 238 IVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPR 297
+MDD+ + LT + GI W+ MF+IF+L RPDVLP++D G+ + + + Y E
Sbjct: 196 WTSMDDEDVIAELTQIRGISRWTAEMFLIFNLSRPDVLPLDDPGLIRAISVNYFSGEPVT 255
Query: 298 PSQMDQLCEKWRPYRSVASWYLWRFVEAKGA 328
S+ ++ W P+R+VA+WY+WR ++A A
Sbjct: 256 RSEAREVAANWEPWRTVATWYMWRSLDAPDA 286
>gi|397904484|ref|ZP_10505395.1| DNA-3-methyladenine glycosylase II( EC:3.2.2.21 ) [Caloramator
australicus RC3]
gi|397162494|emb|CCJ32729.1| DNA-3-methyladenine glycosylase II [Caloramator australicus RC3]
Length = 206
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 106/189 (56%), Gaps = 3/189 (1%)
Query: 132 IRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGG 191
++++ D+++ LI+ D F +L +SI+ QQL+ KA +I+ R + + G
Sbjct: 13 VKYISIKDKRVKELIERVGEIQLDLGKNYFSSLVQSIVGQQLSMKAAETIWNRLVFILGD 72
Query: 192 EAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLT 251
+ + ++ + L+ IG+S K +Y+ DLA K G ++ I ++ D+ + L
Sbjct: 73 ---INCDNIINAPFETLKSIGLSKSKIAYIKDLAEKVNEGAVNLDIIDSLSDEEIIDELI 129
Query: 252 MVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPY 311
V GIG W+ MF+IFSL R DV +NDLG++K VQ L+ LE LP + K++PY
Sbjct: 130 KVKGIGKWTAEMFLIFSLGRMDVFSMNDLGLQKAVQWLFKLEGLPPKEFLLDFTSKFKPY 189
Query: 312 RSVASWYLW 320
R++ S YLW
Sbjct: 190 RTILSLYLW 198
>gi|340788426|ref|YP_004753891.1| putative DNA-3-methyladenine glycosylase protein [Collimonas
fungivorans Ter331]
gi|340553693|gb|AEK63068.1| putative DNA-3-methyladenine glycosylase protein [Collimonas
fungivorans Ter331]
Length = 231
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 95/165 (57%), Gaps = 3/165 (1%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQ-LRQIGVSGRKA 218
P+ AL R+I YQQL +AG +I R +AL G +A L TP L G S K
Sbjct: 54 PYEALVRAIAYQQLHARAGDAILGRMLALFG-DAPFPSARQLRDTPVDILHGCGFSAGKI 112
Query: 219 SYLHDLARKYQNGILSDSA-IVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPI 277
+ +H +A+ +G++ A V M D L LT + G+G W+V MF+I++L R D+LP
Sbjct: 113 ATIHGIAQAALDGVVPPRAEAVTMSDADLIERLTSLRGVGRWTVEMFLIYTLERMDILPA 172
Query: 278 NDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRF 322
+D GVR+G + L +L + P Q+ + W PYR+VA+WYLWR
Sbjct: 173 DDFGVREGYRRLKNLPQAPTKKQIGDIGRAWSPYRTVAAWYLWRL 217
>gi|344172263|emb|CCA84895.1| na-3-methyladenine glycosylase protein [Ralstonia syzygii R24]
Length = 212
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 94/165 (56%), Gaps = 3/165 (1%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R+I YQQL +AG +I R +AL G P +L LR G S K +
Sbjct: 46 PYEALVRAIAYQQLHARAGDAILGRLLALYPGVDFPSPGQLLDTGEATLRGCGFSATKLA 105
Query: 220 YLHDLARKYQNGIL--SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPI 277
+ LA+ +G++ D A+ M D++L L + G+G W+V M +I++L R D+LP
Sbjct: 106 TIRGLAQATLDGVVPTRDEALA-MPDEALVERLVTLRGVGRWTVEMLLIYTLERADILPA 164
Query: 278 NDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRF 322
+D GVR+G + L LE P QM ++ W PYR++A+WYLWR
Sbjct: 165 DDFGVREGYRRLKRLESAPARKQMIEIGRAWSPYRTIAAWYLWRM 209
>gi|121706616|ref|XP_001271570.1| DNA-3-methyladenine glycosylase, putative [Aspergillus clavatus
NRRL 1]
gi|119399718|gb|EAW10144.1| DNA-3-methyladenine glycosylase, putative [Aspergillus clavatus
NRRL 1]
Length = 378
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 112/233 (48%), Gaps = 30/233 (12%)
Query: 120 RPLSSEGEV-EAAIRHLRNADRQLASLIDIH-----PPPTFDSFHTPFLALTRSILYQQL 173
RP ++ G + E A+ HL AD +L +I H P PF AL SI+ QQ+
Sbjct: 136 RPTATTGTLLEKALAHLIAADPRLEPVIQQHHCHLFSPEGLAEEIDPFEALVSSIIGQQV 195
Query: 174 AFKAGTSIYTRFIALC----GGEA--GV------VPETVLALTPQQLRQIGVSGRKASYL 221
+ A SI +F+AL GG A G PE ++ LR G+S RKA Y+
Sbjct: 196 SGAAARSIKNKFLALFNKAPGGSAPDGAFQARFPTPEDIVQCDLVTLRTAGLSQRKAEYI 255
Query: 222 HDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLG 281
H L++K+ G LS ++N D+ L LT V G+G WSV MF F+L R DV DLG
Sbjct: 256 HGLSQKFAAGELSARMLLNASDEELVEKLTAVRGLGKWSVEMFACFALKRTDVFSTGDLG 315
Query: 282 VRKGVQLLYSLE------------ELPRPSQMDQLCEKWRPYRSVASWYLWRF 322
V++G L + + M L K+ PYRS+ WY+WR
Sbjct: 316 VQRGCAALIGKDVSKLKAKGGGKFKYMSEKDMLDLAAKFTPYRSLFMWYMWRI 368
>gi|171322752|ref|ZP_02911492.1| HhH-GPD family protein [Burkholderia ambifaria MEX-5]
gi|171091902|gb|EDT37378.1| HhH-GPD family protein [Burkholderia ambifaria MEX-5]
Length = 227
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 106/200 (53%), Gaps = 3/200 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A L DR L LI P PF+ L RS++ QQ++ + + + R
Sbjct: 30 DKACADLVKRDRILKKLIPKFGPAHLVKRGDPFVTLARSVVGQQISVPSAQAQWARIEDA 89
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C + P+ V+ L +L G+S RK Y+ DLA+ + +G L +MDD+ +
Sbjct: 90 C---PKLAPQPVIRLGADKLIACGLSKRKTEYILDLAQHFVSGALHVDKWTSMDDEDVIA 146
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GI W+ MF+IF+L RPDVLP++D G+ + + + Y E S+ ++ W
Sbjct: 147 ELTQIRGISRWTAEMFLIFNLSRPDVLPLDDPGLIRAISVNYFSGEPVTRSEAREVAANW 206
Query: 309 RPYRSVASWYLWRFVEAKGA 328
P+R+VA+WY+WR ++A A
Sbjct: 207 EPWRTVATWYMWRSLDAPDA 226
>gi|58039425|ref|YP_191389.1| DNA-3-methyladenine glycosylase [Gluconobacter oxydans 621H]
gi|58001839|gb|AAW60733.1| DNA-3-methyladenine glycosylase [Gluconobacter oxydans 621H]
Length = 219
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 110/196 (56%), Gaps = 9/196 (4%)
Query: 137 NADRQLASLIDIHPPPTF--DSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAG 194
AD LA++I P T D+ P+ AL R+I QQL A I+ R + L G +
Sbjct: 13 GADPDLAAVIARIGPCTLRGDNGQEPYDALLRAIAGQQLHGAAARKIFGR-LCLLGAQES 71
Query: 195 V-----VPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVN-MDDKSLFT 248
V P +L+L+ ++LR G+SG K + LA+ +G++ A + M D+ L
Sbjct: 72 VDGPPPAPGRILSLSEERLRACGLSGNKILAMKGLAQARLDGLVPSRAEASVMTDEELIA 131
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
L + GIG W+V M ++F+L+RPDV+P++D GVR+G + + ++ P+P + + E++
Sbjct: 132 RLVTLRGIGRWTVEMLLMFTLNRPDVMPVDDFGVREGWRRIRKMDLPPKPKALKEETERF 191
Query: 309 RPYRSVASWYLWRFVE 324
P+RS +WY WR E
Sbjct: 192 APHRSTLAWYCWRVAE 207
>gi|423721235|ref|ZP_17695417.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Geobacillus thermoglucosidans TNO-09.020]
gi|383365606|gb|EID42899.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Geobacillus thermoglucosidans TNO-09.020]
Length = 288
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 94/169 (55%), Gaps = 5/169 (2%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSG 215
+ L + +++QQL K T + RF+ G + G V PE + AL+ +L+Q+ +SG
Sbjct: 120 YFCLMKCLIHQQLNLKVATRLTERFVQTFGTQIGGVWFYPRPEDIAALSYDELKQLQLSG 179
Query: 216 RKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVL 275
RKA Y+ D +R G LS + + L V GIG W+V F++F L R +V
Sbjct: 180 RKAEYIIDTSRLIAEGKLSLEELARKSEAEAMEALLSVRGIGPWTVQNFLLFGLGRRNVF 239
Query: 276 PINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
P D+G+++ VQ L L E P QM++L ++W PY S AS YLWR +E
Sbjct: 240 PKADIGLQRAVQRLLGLSERPSMKQMEELSKRWEPYLSYASLYLWRSIE 288
>gi|442772057|gb|AGC72726.1| DNA-3-methyladenine glycosylase II [uncultured bacterium
A1Q1_fos_2111]
Length = 225
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 101/188 (53%), Gaps = 8/188 (4%)
Query: 145 LIDIHPPPTFDSF---HTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVL 201
L+ ++ PPT F +L SI QQ++ KA SI+ R + + G + P+ +
Sbjct: 27 LLSLYGPPTLPRAPMRKDRFRSLVGSIAAQQVSGKAAASIFQRVVDIVGEDFN--PQRAI 84
Query: 202 ALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSV 261
+ LR G+SG KA+ + DLA +G + A+ +MDD + ML V GIG W+
Sbjct: 85 DVGFDGLRSAGLSGSKAASVLDLAEHSLSGSVRLEALGSMDDHDVIDMLIQVRGIGVWTA 144
Query: 262 HMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
M +IF L R DV P DLGVR G + LE P PS++ L E++ PYRSV +W+ WR
Sbjct: 145 QMVLIFDLRRIDVWPTGDLGVRVGFANAFGLETPPTPSELATLGEEFAPYRSVMAWWSWR 204
Query: 322 FVEAKGAP 329
A G P
Sbjct: 205 ---ATGTP 209
>gi|83748961|ref|ZP_00945970.1| DNA-3-methyladenine glycosylase II [Ralstonia solanacearum UW551]
gi|207744188|ref|YP_002260580.1| dna-3-methyladenine glycosylase protein [Ralstonia solanacearum
IPO1609]
gi|83724384|gb|EAP71553.1| DNA-3-methyladenine glycosylase II [Ralstonia solanacearum UW551]
gi|206595593|emb|CAQ62520.1| dna-3-methyladenine glycosylase protein [Ralstonia solanacearum
IPO1609]
Length = 215
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 92/164 (56%), Gaps = 1/164 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R+I YQQL KAG +I R +AL G P +L LR G S K +
Sbjct: 49 PYEALVRAIAYQQLHAKAGDAILGRLLALYPGTDFPSPGQLLDTDETALRGCGFSATKLA 108
Query: 220 YLHDLARKYQNGIL-SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ +G++ + + M D++L L + G+G W+V M +I++L R D+LP +
Sbjct: 109 TIRGIAQASLDGVVPTRGEALAMPDEALIERLVTLRGVGRWTVEMLLIYTLERSDILPAD 168
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRF 322
D GVR+G + L LE P QM + W PYR++A+WYLWR
Sbjct: 169 DFGVREGYRRLKRLEAAPTRRQMMETGRAWSPYRTIAAWYLWRM 212
>gi|160897949|ref|YP_001563531.1| HhH-GPD family protein [Delftia acidovorans SPH-1]
gi|160363533|gb|ABX35146.1| HhH-GPD family protein [Delftia acidovorans SPH-1]
Length = 269
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 110/199 (55%), Gaps = 13/199 (6%)
Query: 131 AIRHLRNADRQLASLI----DIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFI 186
A R L DR + LI + P D+F T L RSI+ QQ++ KA +++ +F
Sbjct: 74 ACRQLVRRDRVMKRLIPRFAHLALQPGGDAFAT----LARSIVGQQISMKAAQTLWNKFA 129
Query: 187 ALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSL 246
L A + P+ VL L +R +G+S RK YL DLA + L M D+++
Sbjct: 130 RL---PARMAPDLVLKLKVDDMRAVGLSARKVDYLVDLAMHFTEHRLHQDDWQGMSDEAI 186
Query: 247 FTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV-QLLYSLEELPRPSQMDQLC 305
L + G+G W+ MF+IF L RP+VLP++D G+ G+ Q +S + + R S+ ++
Sbjct: 187 VAELMSIRGVGRWTAEMFLIFYLQRPNVLPLDDAGLISGISQNYFSGDPVSR-SEAREVA 245
Query: 306 EKWRPYRSVASWYLWRFVE 324
E W+P+ +VA+WY+WR +E
Sbjct: 246 EAWKPWCTVATWYIWRSLE 264
>gi|320102289|ref|YP_004177880.1| HhH-GPD family protein [Isosphaera pallida ATCC 43644]
gi|319749571|gb|ADV61331.1| HhH-GPD family protein [Isosphaera pallida ATCC 43644]
Length = 226
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 96/172 (55%), Gaps = 7/172 (4%)
Query: 159 TPFLALTRSILYQQLAFKAGTSIYTRFIALCG------GEAGVVPETVLALTPQQLRQIG 212
T F L R+I+ QQ+A KA ++I+ R + G P+ +L + + LR +G
Sbjct: 51 TRFGILVRAIVGQQIAAKAASAIHRRLVLHLADDPESAGRFVTDPQRLLDTSEENLRGLG 110
Query: 213 VSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRP 272
+S K +YL LA NG L + + D + LT V GIG W+ MF++F+L RP
Sbjct: 111 LSRVKQTYLRALAHAQLNG-LEVERLHELPDDEIVARLTAVKGIGRWTAEMFLMFALARP 169
Query: 273 DVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
DV P+ DL +R GV + + P P+ +L + W P+R++ASWYLWR+VE
Sbjct: 170 DVFPVGDLAIRVGVARFHHIASPPSPADCLRLAQPWTPHRTLASWYLWRWVE 221
>gi|338213451|ref|YP_004657506.1| HhH-GPD family protein [Runella slithyformis DSM 19594]
gi|336307272|gb|AEI50374.1| HhH-GPD family protein [Runella slithyformis DSM 19594]
Length = 200
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 114/193 (59%), Gaps = 6/193 (3%)
Query: 134 HLRNADRQLASLIDIHPP-PTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGE 192
+L + D +AS+I+ P D H +LAL SI+ QQ++ KA SI+TRF AL +
Sbjct: 6 YLASNDAIMASIIETTPMFKKVDWNHDVYLALLESIVSQQISVKAADSIFTRFRALFD-D 64
Query: 193 AGVVPETVLALTPQQLRQIGVSGRKASYLHDLAR-KYQNGILSDSAIVNMDDKSLFTMLT 251
A PE++L+ T ++LR G+S +K YL ++A +NGI + + D+ + L
Sbjct: 65 AYPHPESLLSKTAEELRSAGLSLQKIKYLQNVALFAIENGI-DYEKLQKLTDEEIVRYLI 123
Query: 252 MVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRP--SQMDQLCEKWR 309
+ G+G W+V M ++F + RPDV PI+DL +R+ + Y+L E R ++ + E WR
Sbjct: 124 PIKGVGRWTVEMLLMFVMDRPDVFPIDDLVIRQKMVRAYNLTETGRALYKELHVIAENWR 183
Query: 310 PYRSVASWYLWRF 322
PYR++A YLWR+
Sbjct: 184 PYRTMACHYLWRW 196
>gi|239825989|ref|YP_002948613.1| DNA-3-methyladenine glycosylase II [Geobacillus sp. WCH70]
gi|239806282|gb|ACS23347.1| DNA-3-methyladenine glycosylase II [Geobacillus sp. WCH70]
Length = 288
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 99/169 (58%), Gaps = 5/169 (2%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSG 215
+ LT+ +++QQL K + RF+ G + V PE + +L+ +L+Q+ +SG
Sbjct: 120 YFCLTKCLIHQQLNLKVAYRLTERFVKTFGTQIDGVWFYPRPEDIASLSYDELKQLQLSG 179
Query: 216 RKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVL 275
RKA Y+ D +R +G LS + + +++ + L + GIG W+V F++F L +P+V
Sbjct: 180 RKAEYIIDTSRLIADGKLSLEELAHQNEEEVMEQLLSIRGIGPWTVQNFLLFGLGKPNVF 239
Query: 276 PINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
P D+G+++ +Q L L + P QM++L ++W PY S AS YLWR +E
Sbjct: 240 PKADIGLQRAIQRLLGLSQKPSIKQMEELSKRWEPYLSYASLYLWRSIE 288
>gi|296410984|ref|XP_002835215.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295627990|emb|CAZ79336.1| unnamed protein product [Tuber melanosporum]
Length = 339
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 139/301 (46%), Gaps = 40/301 (13%)
Query: 49 THANVTPQT--SSPPSKIPLRPRKIRKLSPDNGVDQASSSQPTESSK---ATSAKSTKSR 103
+ A VT +T SS K P+ +K +L P GV + + P ++ A A ST
Sbjct: 20 SKAGVTKRTKSSSAGGKKPVSTKKSTQL-PVAGVAKERPASPHGTNAPLIAPRANSTAVL 78
Query: 104 AIQQQQQTLTVPRIIARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDS-----FH 158
I+Q P ++ + A HL + D L LI+ H F +
Sbjct: 79 PIKQHA-----------PATTNTILGQATAHLLSVDPSLKWLIESHHCGIFSAEGLAELA 127
Query: 159 TPFLALTRSILYQQLAFKAGTSIYTRFIAL------CGGEAGVVPETVLALTPQQLRQIG 212
PF +L I+ QQ++ A +I TRFIAL C PE V+A +LR G
Sbjct: 128 DPFQSLVSGIISQQVSGAAARTIKTRFIALFAPTPTCPQPFFPTPEMVVACPNDKLRSAG 187
Query: 213 VSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRP 272
+SGRKA Y+ LA + +G LS + D + LT V GIG+WS MF++F L R
Sbjct: 188 LSGRKAEYVVSLAEHFIDGTLSPEVLSTAPDAEVIERLTRVRGIGNWSAEMFLMFGLKRM 247
Query: 273 DVLPINDLGVRKGVQLLYSLE------------ELPRPSQMDQLCEKWRPYRSVASWYLW 320
DV DLG+++G+ + + + + M +L E ++PYRS+ WY+W
Sbjct: 248 DVFSTGDLGIQRGMAAHFGKDVAKLKSGGKGKWKYMSETDMLRLSEGFKPYRSLFMWYMW 307
Query: 321 R 321
R
Sbjct: 308 R 308
>gi|409405695|ref|ZP_11254157.1| 3-methyl-adenine DNA glycosylase II [Herbaspirillum sp. GW103]
gi|386434244|gb|EIJ47069.1| 3-methyl-adenine DNA glycosylase II [Herbaspirillum sp. GW103]
Length = 219
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 104/197 (52%), Gaps = 11/197 (5%)
Query: 129 EAAIRHLRNADRQLASLI----DIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTR 184
E A L DR + +I D+ D+F T L RS++ QQ++ KA +++ R
Sbjct: 21 EEAKAELMKRDRIMRKIIPQFGDLQLTVRGDAFTT----LARSVIGQQISTKAANAVWQR 76
Query: 185 FIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDK 244
F+ C P V+ L G+S RKA Y+ DLA ++ + M+D+
Sbjct: 77 FLEAC---PRCTPAQVMRTGADGLATCGLSKRKAEYILDLAAHFKAKTVHPDKWAEMEDE 133
Query: 245 SLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQL 304
++ + + GIG W+ MF+IF+L RP+VLP++DLG+ KG+ + Y E S ++
Sbjct: 134 AVIAEMIQIRGIGRWTAEMFLIFNLLRPNVLPLDDLGLLKGISVSYFSGEPVSRSDAREV 193
Query: 305 CEKWRPYRSVASWYLWR 321
W P+R+VA+WYLWR
Sbjct: 194 AANWEPWRTVATWYLWR 210
>gi|302913163|ref|XP_003050858.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256731796|gb|EEU45145.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 360
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 110/221 (49%), Gaps = 19/221 (8%)
Query: 123 SSEGEVEAAIRHLRNADRQLASLIDIH-----PPPTFDSFHTPFLALTRSILYQQLAFKA 177
++E ++ A HL D ++ LID H P PF +L+ I+ QQ++ A
Sbjct: 133 TTENLLQEACDHLIKVDGRMKPLIDNHHCRVFSPEGLAEEIDPFESLSSGIISQQVSGAA 192
Query: 178 GTSIYTRFIALCGGEAGV---VPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILS 234
SI +FIAL + +P V A + ++LR G+S RKA Y+ LA K+ +G LS
Sbjct: 193 AKSIKAKFIALFEEQPDSRFPLPSQVAAKSIEELRTAGLSQRKAEYIKGLAEKFASGELS 252
Query: 235 DSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEE 294
+ + D+ + L V G+G WSV MF F L R DV + DLGV++G+ +
Sbjct: 253 ARMLHDASDEEVMEKLIAVRGLGKWSVEMFACFGLKRMDVFSLGDLGVQRGMAAFVGRDV 312
Query: 295 LPRPSQ-----------MDQLCEKWRPYRSVASWYLWRFVE 324
S+ M +L +K+ PYRS+ WY+WR E
Sbjct: 313 AKLKSKGGKWKYMSEQDMVELSDKFAPYRSLFMWYMWRVEE 353
>gi|421895706|ref|ZP_16326106.1| dna-3-methyladenine glycosylase protein [Ralstonia solanacearum
MolK2]
gi|206586871|emb|CAQ17456.1| dna-3-methyladenine glycosylase protein [Ralstonia solanacearum
MolK2]
Length = 215
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 92/164 (56%), Gaps = 1/164 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R+I YQQL KAG +I R +AL G P +L LR G S K +
Sbjct: 49 PYEALVRAIAYQQLHAKAGDAILGRLLALYPGTDFPSPGQLLDTDETALRGCGFSATKLA 108
Query: 220 YLHDLARKYQNGIL-SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ +G++ + + M D++L L + G+G W+V M +I++L R D+LP +
Sbjct: 109 TIRGIAQASLDGVVPTRGEALAMPDEALIEQLVTLRGVGRWTVEMLLIYTLERSDILPAD 168
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRF 322
D GVR+G + L LE P QM + WRPYR +A+W+LWR
Sbjct: 169 DFGVREGYRRLKRLEAAPTRQQMMETGRAWRPYRIIAAWHLWRM 212
>gi|427403813|ref|ZP_18894695.1| hypothetical protein HMPREF9710_04291 [Massilia timonae CCUG 45783]
gi|425717482|gb|EKU80440.1| hypothetical protein HMPREF9710_04291 [Massilia timonae CCUG 45783]
Length = 237
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 107/200 (53%), Gaps = 15/200 (7%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFH-----TPFLALTRSILYQQLAFKAGTSIYTRF 185
A R L DR + LI P F H PF+ L RSI+ QQ+ KA + +
Sbjct: 37 AKRELMQRDRIMNKLI-----PQFGDLHLRGQPDPFITLARSIVGQQVTPKAADLAWGKL 91
Query: 186 IALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKS 245
+A+C + P VL L QL G+S RK Y+ DLA ++ + MDD++
Sbjct: 92 LAVC---PKLAPSQVLKLGAAQLSGCGLSKRKTEYILDLADHFKAKRVHADLWSEMDDEA 148
Query: 246 LFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV-QLLYSLEELPRPSQMDQL 304
+ L + GI W+ MF+IF+L RP+VLP++D G+ +G+ Q +S E + R S ++
Sbjct: 149 VIAELVQIRGITRWTAEMFLIFNLLRPNVLPLDDPGLIQGISQNYFSGEPVSR-SDAREV 207
Query: 305 CEKWRPYRSVASWYLWRFVE 324
W P+R+VA+WYLWR ++
Sbjct: 208 SANWEPWRTVATWYLWRSLD 227
>gi|336236759|ref|YP_004589375.1| DNA-3-methyladenine glycosylase II [Geobacillus thermoglucosidasius
C56-YS93]
gi|335363614|gb|AEH49294.1| DNA-3-methyladenine glycosylase II [Geobacillus thermoglucosidasius
C56-YS93]
Length = 288
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 94/169 (55%), Gaps = 5/169 (2%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSG 215
+ L + +++QQL K + + RF+ G + G V PE + AL+ +L+Q+ +SG
Sbjct: 120 YFCLMKCLIHQQLNLKVASRLTERFVQTFGTQIGGVWFYPRPEDIAALSYDELKQLQLSG 179
Query: 216 RKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVL 275
RKA Y+ D +R G LS + + L V GIG W+V F++F L R +V
Sbjct: 180 RKAEYIIDTSRLIAEGKLSLEELARKSEAEAMEALLSVRGIGPWTVQNFLLFGLGRRNVF 239
Query: 276 PINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
P D+G+++ VQ L L E P QM++L ++W PY S AS YLWR +E
Sbjct: 240 PKADIGLQRAVQRLLGLSERPSMKQMEELSKRWEPYLSYASLYLWRSIE 288
>gi|392952371|ref|ZP_10317926.1| hypothetical protein WQQ_19980 [Hydrocarboniphaga effusa AP103]
gi|391861333|gb|EIT71861.1| hypothetical protein WQQ_19980 [Hydrocarboniphaga effusa AP103]
Length = 226
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 105/198 (53%), Gaps = 5/198 (2%)
Query: 133 RHLRNADRQLASLIDIHPPPTFD-SFHTPFLALTRSILYQQLAFKAGTSIYTRF-IALCG 190
RHL + LI H T S PF L SI+ QQL+ KA +I R A+
Sbjct: 24 RHLSRRCAVMKRLIKTHGSCTIGRSRRDPFHVLCTSIISQQLSVKAADTIQARVATAVLA 83
Query: 191 GEA---GVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLF 247
G A G +P + + LR G+S KA +L +A+K +G S + +DD++
Sbjct: 84 GAAEKGGFMPAHFIEVEFDLLRSAGLSTAKAKWLIAIAQKVHSGEFSFEKLRKLDDEAAI 143
Query: 248 TMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEK 307
L + GIG W+ M+++F+L R D+ ++D+G+R GV L++ + + E+
Sbjct: 144 EALDALPGIGRWTAEMYLMFALARRDLFALDDVGLRNGVNRLFNDGAKLDDAATLAIAER 203
Query: 308 WRPYRSVASWYLWRFVEA 325
WRPYRS+ASWYLWR +EA
Sbjct: 204 WRPYRSIASWYLWRAMEA 221
>gi|424068521|ref|ZP_17805975.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|407997375|gb|EKG37814.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
Length = 221
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 106/195 (54%), Gaps = 5/195 (2%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFD---SFHTPFLALTRSILYQQLAFKAGTSIYTRFIA 187
A+ L+ DR+ LI+ H P S PF AL +++ YQQL KAG +I R A
Sbjct: 15 AVERLKAIDRRWELLIN-HVGPCLHPVTSAQDPFQALIKAVAYQQLHAKAGDAIVMRLRA 73
Query: 188 LCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSD-SAIVNMDDKSL 246
L A + ++ L Q LR G S K + +A NG++ D S + M ++ L
Sbjct: 74 LFPDTAFPAAQALIDLDEQTLRSCGFSASKCRAIKAIAVARSNGLVPDISDALAMSNEEL 133
Query: 247 FTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCE 306
L + G+G W+V M +I+ L + DV+P +D GV +G + LY+LE P +M + E
Sbjct: 134 VARLVQLPGVGRWTVEMMLIYGLGQMDVMPASDYGVCEGYRRLYALELKPGHKEMAAMAE 193
Query: 307 KWRPYRSVASWYLWR 321
++ P+R+VA+WYLWR
Sbjct: 194 RFAPFRTVAAWYLWR 208
>gi|448611986|ref|ZP_21662416.1| DNA-3-methyladenine glycosylase [Haloferax mucosum ATCC BAA-1512]
gi|445742747|gb|ELZ94241.1| DNA-3-methyladenine glycosylase [Haloferax mucosum ATCC BAA-1512]
Length = 193
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 104/197 (52%), Gaps = 7/197 (3%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A R L+ D L +++ H P + D PF L SI+ QQL+ A +I R
Sbjct: 3 DDAYRELK-CDPHLGDVVEEHGPLSLDPADDPFERLVVSIVNQQLSTSAAATIRDRLFE- 60
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
V P +LA L G+S +K Y+ ++A +Q+G ++S + MDD +
Sbjct: 61 ---RVEVTPAGLLAADEAVLGDCGLSNQKIGYVRNVAEAFQDGFSAES-LRAMDDDDVID 116
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLE-ELPRPSQMDQLCEK 307
LT + G+G W+ MF+IF L R DV P+ DLG+R+G++ ++ + + M + K
Sbjct: 117 SLTEIRGVGVWTAKMFLIFVLAREDVFPVEDLGIRRGMERVFGFDVDTVSRGTMRERAAK 176
Query: 308 WRPYRSVASWYLWRFVE 324
W PYRS AS YLWR V+
Sbjct: 177 WTPYRSYASLYLWRSVD 193
>gi|448414240|ref|ZP_21577379.1| HhH-GPD family protein [Halosarcina pallida JCM 14848]
gi|445682533|gb|ELZ34950.1| HhH-GPD family protein [Halosarcina pallida JCM 14848]
Length = 204
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 111/201 (55%), Gaps = 15/201 (7%)
Query: 127 EVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFI 186
+ E+A+R AD + L++ P T + + F + ++ YQ ++ + ++ R
Sbjct: 4 DAESALR----ADPVMRRLMERRDPYT-EREWSEFERIVVAVAYQSISTASAAAVTERVF 58
Query: 187 ALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSL 246
+ GE V PE VL LR+ G+S RK Y+ + AR ++ S A+ + D +
Sbjct: 59 EVLDGE--VTPERVLDADESALREAGLSERKVEYVRNAARAFRESDFSREALADYSDGEV 116
Query: 247 FTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLY-----SLE--ELPRPS 299
LT V G+G W+ MF++F L R DVLP+ DL VR+G++ LY S E EL R +
Sbjct: 117 VERLTEVRGVGEWTAEMFLLFVLEREDVLPLGDLAVRRGIEDLYGDGRGSGEDGELTR-A 175
Query: 300 QMDQLCEKWRPYRSVASWYLW 320
+M ++ E+WRPYRS+A+ Y+W
Sbjct: 176 EMREVAERWRPYRSLATRYVW 196
>gi|299751274|ref|XP_002911617.1| hypothetical protein CC1G_14150 [Coprinopsis cinerea okayama7#130]
gi|298409299|gb|EFI28123.1| hypothetical protein CC1G_14150 [Coprinopsis cinerea okayama7#130]
Length = 388
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 97/176 (55%), Gaps = 23/176 (13%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHT--PFLALTRSILYQQLAFKAGTSIYTRFIAL 188
A+RHL D + L D P F+ PF AL+ SIL QQ+++KA SI +FI L
Sbjct: 93 AMRHLITVDPRFQDLFDRMPCRPFEQLEQVHPFRALSISILGQQISWKAARSITHKFIRL 152
Query: 189 CGGEAGVVPETV----------LALTPQQ--------LRQIGVSGRKASYLHDLARKYQN 230
+PE V + TP+Q LR G+S RKA Y+ DLA ++ +
Sbjct: 153 YSPS---IPEEVTDESRAAAMQVFPTPEQVSKTEVSLLRTAGLSERKAQYIQDLAARFAD 209
Query: 231 GILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV 286
G LS ++N D+ L ML V GIG W+V MF IFSL RPD+LP+ DLGV++G+
Sbjct: 210 GRLSTDKLLNASDEELAEMLIEVKGIGRWTVDMFAIFSLRRPDILPVGDLGVQRGL 265
>gi|257051379|ref|YP_003129212.1| HhH-GPD family protein [Halorhabdus utahensis DSM 12940]
gi|256690142|gb|ACV10479.1| HhH-GPD family protein [Halorhabdus utahensis DSM 12940]
Length = 190
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 108/190 (56%), Gaps = 7/190 (3%)
Query: 135 LRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAG 194
LR+ D +A L+ H + + PF L SI+ QQL+ + +I R
Sbjct: 8 LRD-DPAMAPLVAEHGELSVEPAEDPFERLVTSIVRQQLSMASADAIEERLFE----HFD 62
Query: 195 VVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVN 254
V P + + +QLR +GVSGRK + ++A +Q + +A D+++ LT ++
Sbjct: 63 VTPTALRDVPVEQLRDVGVSGRKGQTIRNVASAWQAHDYTQAAFDGRSDEAVIDELTDIS 122
Query: 255 GIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSV 314
GIG W+ MF++F+L R DV P+ DLG+RKG+Q ++ +++ R + M E+W+PYRS+
Sbjct: 123 GIGPWTAKMFLMFALGREDVFPVEDLGIRKGMQTIFE-DDMERQA-MVARAERWQPYRSI 180
Query: 315 ASWYLWRFVE 324
AS YLWR V+
Sbjct: 181 ASMYLWRVVD 190
>gi|312112310|ref|YP_003990626.1| HhH-GPD family protein [Geobacillus sp. Y4.1MC1]
gi|311217411|gb|ADP76015.1| HhH-GPD family protein [Geobacillus sp. Y4.1MC1]
Length = 288
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 94/169 (55%), Gaps = 5/169 (2%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSG 215
+ L + +++QQL K + + RF+ G + G V PE + AL+ +L+Q+ +SG
Sbjct: 120 YFCLMKCLIHQQLNLKVASRLTERFVQTFGTQIGGVWFYPRPEDIAALSYDELKQLQLSG 179
Query: 216 RKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVL 275
RKA Y+ D +R G LS + + L V GIG W+V F++F L R +V
Sbjct: 180 RKAEYIIDTSRLIAEGKLSLEELARKSEAEAMEALLSVRGIGPWTVQNFLLFGLGRRNVF 239
Query: 276 PINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
P D+G+++ VQ L L E P QM++L ++W PY S AS YLWR +E
Sbjct: 240 PKADIGLQRAVQRLLGLSERPSMKQMEELSKRWEPYLSYASLYLWRSIE 288
>gi|429220567|ref|YP_007182211.1| HhH-GPD superfamily base excision DNA repair protein [Deinococcus
peraridilitoris DSM 19664]
gi|429131430|gb|AFZ68445.1| HhH-GPD superfamily base excision DNA repair protein [Deinococcus
peraridilitoris DSM 19664]
Length = 207
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 98/171 (57%), Gaps = 12/171 (7%)
Query: 150 PPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLR 209
PPP TPF AL RS++ QQ++ KA SI R + + P +++L+P++LR
Sbjct: 37 PPPERG---TPFAALIRSVVGQQVSVKAAASIEGRLREVA---PSLSPHELVSLSPEELR 90
Query: 210 QIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSL 269
G+S K +H LA++ G+L A+ DD+++ L+ V GIG W+ MF++F+L
Sbjct: 91 ARGLSWAKVRTVHTLAQRAAEGLLDFEALSRSDDETVIEALSAVPGIGRWTAEMFLMFAL 150
Query: 270 HRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLW 320
RPDV D G+RK V+ LY P+ ++ +KW PYRSVA+ LW
Sbjct: 151 RRPDVFSWGDAGLRKAVRTLYG------PASGPEVAQKWSPYRSVAARLLW 195
>gi|395761810|ref|ZP_10442479.1| DNA-3-methyladenine glycosylase II [Janthinobacterium lividum PAMC
25724]
Length = 224
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFH-----TPFLALTRSILYQQLAFKAGTSIYT 183
E A L DR + LI P F H PF L RS++ QQ+ KA + +
Sbjct: 15 EEAKIELMKRDRIMKKLI-----PQFGDLHLVGHSDPFTTLARSLVGQQITPKAADAAWK 69
Query: 184 RFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDD 243
+ +A C P VL +QL G+S RK Y+ DLA ++ + S MDD
Sbjct: 70 KLLAAC---PKCTPSQVLKAGAEQLSACGLSKRKTEYILDLADHFKAKRVHASQWDQMDD 126
Query: 244 KSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQ 303
+++ L + GIG W+ MF+IF+L RP+VLP++D G+ +G+ + Y E S +
Sbjct: 127 EAVIAELVQIRGIGRWTAEMFLIFNLLRPNVLPLDDPGLIQGISVNYFSGEPVSRSDARE 186
Query: 304 LCEKWRPYRSVASWYLWR 321
+ W P+R+VA+WYLWR
Sbjct: 187 VSANWEPWRTVATWYLWR 204
>gi|421890884|ref|ZP_16321724.1| na-3-methyladenine glycosylase protein [Ralstonia solanacearum
K60-1]
gi|378963751|emb|CCF98472.1| na-3-methyladenine glycosylase protein [Ralstonia solanacearum
K60-1]
Length = 212
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 91/164 (55%), Gaps = 1/164 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R+I YQQL KAG +I R +AL G P L LR G S K +
Sbjct: 46 PYEALVRAIAYQQLHAKAGDAILGRLLALYPGVDFPSPGQFLDTDETALRGCGFSATKLA 105
Query: 220 YLHDLARKYQNGIL-SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A+ +G++ + + M D++L L + G+G W+V M +I++L R D+LP +
Sbjct: 106 TIRGIAQASLDGVVPTRGKALAMPDEALIERLVTLRGVGRWTVEMLLIYTLERSDILPAD 165
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRF 322
D GVR+G + L LE P QM + W PYR++A+WYLWR
Sbjct: 166 DFGVREGYRRLKRLEAAPTRRQMMETGRAWSPYRTIAAWYLWRM 209
>gi|251790833|ref|YP_003005554.1| DNA-3-methyladenine glycosylase II [Dickeya zeae Ech1591]
gi|247539454|gb|ACT08075.1| DNA-3-methyladenine glycosylase II [Dickeya zeae Ech1591]
Length = 224
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 109/197 (55%), Gaps = 5/197 (2%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDS--FHTPFLALTRSILYQQLAFKAGTSIYTRFI-A 187
A+ HL D A LID F+S P+ AL R++ QQL+ +A +I ++
Sbjct: 13 ALAHLSAIDAHWARLIDGVGHLRFESRPAREPYEALIRAVASQQLSNRAAAAIISKLQQR 72
Query: 188 LCGGEAGV-VPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSD-SAIVNMDDKS 245
GE G E + LRQ G S RK + +A+ +G++ D +A ++DD++
Sbjct: 73 FAVGENGFPAAEQLATCEAAILRQCGFSARKIDTVQGIAQGVLSGLVPDRTAAEHLDDET 132
Query: 246 LFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLC 305
L L + GIG W+V M +I +L R D++P++DLG+++G + LY L + P M +L
Sbjct: 133 LIERLCSLKGIGRWTVEMLLISTLERMDIMPVDDLGIKQGFRYLYRLPQDPTRKTMLELS 192
Query: 306 EKWRPYRSVASWYLWRF 322
E RPYR++A+WYLWR
Sbjct: 193 EPCRPYRTLAAWYLWRI 209
>gi|89097301|ref|ZP_01170191.1| YfjP [Bacillus sp. NRRL B-14911]
gi|89088124|gb|EAR67235.1| YfjP [Bacillus sp. NRRL B-14911]
Length = 281
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 105/198 (53%), Gaps = 11/198 (5%)
Query: 134 HLRNADRQLASLIDIH--PPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGG 191
H +N +L ++ D H P D P+ L + I++QQL ++ RF+ G
Sbjct: 88 HFQNT--ELKAIFDEHYGTPVVLD--FDPYGCLLKCIIHQQLNLSFAFTLTKRFVETFGF 143
Query: 192 EAGVV-----PETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSL 246
+ V PETV ALT +QLR++ SGRKA Y L+++ G L+ + D+ +
Sbjct: 144 QKDGVWFYPRPETVAALTVEQLRELQFSGRKAEYAIGLSKEITEGRLNLEELAKEPDEMV 203
Query: 247 FTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCE 306
L + GIG W+V F++F L RP++ P D+G++ ++ LY LE P QMD+
Sbjct: 204 MKKLIKIRGIGPWTVQNFLMFGLGRPNLFPKADIGLQNALKKLYKLEAKPTHEQMDEYML 263
Query: 307 KWRPYRSVASWYLWRFVE 324
W PY + AS YLWR +E
Sbjct: 264 GWDPYLTYASLYLWRSIE 281
>gi|330813269|ref|YP_004357508.1| drug/metabolite transporter [Candidatus Pelagibacter sp. IMCC9063]
gi|327486364|gb|AEA80769.1| drug/metabolite transporter (dmt superfamily) [Candidatus
Pelagibacter sp. IMCC9063]
Length = 205
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 97/169 (57%), Gaps = 3/169 (1%)
Query: 156 SFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSG 215
S + PF +L RSI+ QQ++ ++ S++ +F ++P+ +L L+ QL G+S
Sbjct: 34 SRNDPFFSLCRSIIGQQISVQSADSVWKKF---SHKAKKIIPKNILNLSKSQLSSCGLSR 90
Query: 216 RKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVL 275
+K YL LA+K+ + + + MDD+ L+ V GIG W+ MF+ F+ RPD+
Sbjct: 91 QKIEYLKILAKKFDDKSIDIKKLKEMDDEEAIKYLSEVKGIGRWTAEMFLFFNQLRPDIY 150
Query: 276 PINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
P+ D+G+ K + Y P ++++L + W PY +VA+WY+WR ++
Sbjct: 151 PVQDIGLLKAISKNYKTAYPPPQKKIEELKKLWSPYATVATWYMWRSID 199
>gi|406965958|gb|EKD91542.1| hypothetical protein ACD_30C00002G0039 [uncultured bacterium]
Length = 198
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 105/190 (55%), Gaps = 2/190 (1%)
Query: 132 IRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGG 191
I + +D + SLI+ + + T F+ L RSI+ QQ++ KAG +++ RFI L
Sbjct: 6 ILYFEKSDPVIYSLIEEYGLIEVVASKTYFINLCRSIINQQISNKAGRAVFERFINLFPN 65
Query: 192 EAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLT 251
+ PE +L + ++LR +G+S K SYL DL+++ L I M+D + L
Sbjct: 66 KIPT-PEKLLKIKDEKLRSVGMSKIKVSYLKDLSKRIIKKELLLEKIEVMEDTEVIEQLI 124
Query: 252 MVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPY 311
V GIG W+ MF++FSL R D+ D+G+R ++ LY LE P +++++ E W PY
Sbjct: 125 RVKGIGVWTAEMFLMFSLGREDIFSHGDIGLRNAIKKLYFLEN-PSRKEIEKIVENWSPY 183
Query: 312 RSVASWYLWR 321
++ LWR
Sbjct: 184 KTYVCKLLWR 193
>gi|297539848|ref|YP_003675617.1| DNA-3-methyladenine glycosylase II [Methylotenera versatilis 301]
gi|297259195|gb|ADI31040.1| DNA-3-methyladenine glycosylase II [Methylotenera versatilis 301]
Length = 206
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 110/207 (53%), Gaps = 12/207 (5%)
Query: 122 LSSEGEVEAAIRHLRNADRQLASLID------IHPPPTFDSFHTPFLALTRSILYQQLAF 175
L+S ++ A + L N D A LI+ P P P+ AL R++ YQQL
Sbjct: 2 LTSTLHLQQATKFLTNLDADWARLIETVGECQFEPKPA----REPYEALIRAVAYQQLHA 57
Query: 176 KAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGIL-S 234
KAG +I R +++ G +A +LA LR G S RK + +A +G++ +
Sbjct: 58 KAGDAIIKRLLSIYG-DAFPAASQLLATDFVNLRACGFSARKIETIQGIAEGAISGLVPT 116
Query: 235 DSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEE 294
+ +M D+ L L + GIG W+V M ++F++ R DVLP +D GV +G + L L+
Sbjct: 117 RTEAASMADEDLILRLVTLKGIGRWTVEMLLMFTMARMDVLPADDFGVVQGYKRLKKLKV 176
Query: 295 LPRPSQMDQLCEKWRPYRSVASWYLWR 321
P ++ ++ + W PYR++ASWYLWR
Sbjct: 177 APTRKEITEIGKTWSPYRTIASWYLWR 203
>gi|56418963|ref|YP_146281.1| DNA-3-methyladenine glycosidase II [Geobacillus kaustophilus
HTA426]
gi|56378805|dbj|BAD74713.1| DNA-3-methyladenine glycosidase II [Geobacillus kaustophilus
HTA426]
Length = 294
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 95/169 (56%), Gaps = 5/169 (2%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSG 215
+ L + +++QQL K G + RF+ G E V PE + A + + LR + +SG
Sbjct: 126 YFCLVKCLIHQQLHLKVGYRLTERFVKTFGEERDGVWFYPRPEEIAARSYEDLRALQLSG 185
Query: 216 RKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVL 275
RKA Y+ +++R G L I M+D + LT V GIG W+V F++F L RP+V
Sbjct: 186 RKAEYIVNVSRLIAEGKLRLDEIEQMEDGEVMERLTAVRGIGPWTVQNFLLFGLGRPNVF 245
Query: 276 PINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
P D+G+++ V+ + L + P +M L E+W+PY S A+ YLWR +E
Sbjct: 246 PPADIGLQRAVEKWFGLPKRPTTKEMAALGERWKPYASYAALYLWRSIE 294
>gi|452836605|gb|EME38549.1| hypothetical protein DOTSEDRAFT_140695 [Dothistroma septosporum
NZE10]
Length = 305
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 117/229 (51%), Gaps = 27/229 (11%)
Query: 123 SSEGEVEAAIRHLRNADR-----QLASLIDIH-----PPPTFDSFHTPFLALTRSILYQQ 172
SS+ ++ A HL D +L +I+ H P PF +++ I+ QQ
Sbjct: 68 SSKTLLDEACAHLLKVDHAHDNGRLKPIIERHHCRVFSPEGLAETIDPFRSISSGIMAQQ 127
Query: 173 LAFKAGTSIYTRFIALCGGE---AGVVPETVLALTP-QQLRQIGVSGRKASYLHDLARKY 228
++ A SI +FIAL + G P ++A TP +LR+ G+S RKA Y+ LA+K+
Sbjct: 128 VSGAAAKSIKNKFIALFEPDQCPTGFPPPALVAATPISRLREAGLSQRKAEYIQGLAQKF 187
Query: 229 QNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQL 288
+G ++ ++ D+ +F+ L V G+G+WSV MFM F L R DV DLGV++G+
Sbjct: 188 DSGEITVKQLMEGSDEDVFSQLIAVRGLGAWSVEMFMCFGLKRMDVFSTGDLGVQRGMAA 247
Query: 289 LYSLE-------------ELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
+ + +M ++ E++RPYRS+ WY+WR E
Sbjct: 248 YMGRDVGKLKAKGSNNKWKYMSEKEMVEIAERFRPYRSLFMWYMWRIEE 296
>gi|433638313|ref|YP_007284073.1| HhH-GPD superfamily base excision DNA repair protein [Halovivax
ruber XH-70]
gi|433290117|gb|AGB15940.1| HhH-GPD superfamily base excision DNA repair protein [Halovivax
ruber XH-70]
Length = 198
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 98/179 (54%), Gaps = 3/179 (1%)
Query: 142 LASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVL 201
+A L++ + P T ++ F L SI+ QQL+ + +I R + E + P+ VL
Sbjct: 16 MAELVETYDPYT-ETERDEFERLCVSIINQQLSTASANAIRGRVYEVLDDE--ITPDRVL 72
Query: 202 ALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSV 261
+ Q L G+SG K YL + AR + L+ S + + + + LT + GIG W+
Sbjct: 73 STADQPLLDAGLSGTKVEYLRNAARAFDETDLTRSGLADHSNDEVVDRLTEIKGIGEWTA 132
Query: 262 HMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLW 320
M+++F L RPDVLP+ DL +R G+Q LY E ++M + + WRPYRSV + Y+W
Sbjct: 133 EMYLLFVLERPDVLPLGDLAIRNGIQQLYGDGEEMTRAEMRTVADPWRPYRSVGTRYIW 191
>gi|347831149|emb|CCD46846.1| hypothetical protein [Botryotinia fuckeliana]
Length = 438
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 111/229 (48%), Gaps = 29/229 (12%)
Query: 122 LSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFH-----TPFLALTRSILYQQLAFK 176
+S+ + AI HL + +L +I+ HP F + PF AL I+ QQ++
Sbjct: 197 VSTSDVLNKAIEHLIKVEPKLKPIIEKHPCKMFSAEGLAEEIEPFRALVSGIISQQVSGA 256
Query: 177 AGTSIYTRFIALCG-------GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQ 229
A SI +F+AL P ++A LR G+S RKA Y+ LA K+
Sbjct: 257 AAKSIKAKFVALFNPPDSDPSTHTFPTPSAIVATDIPNLRTAGLSQRKAEYISGLALKFT 316
Query: 230 NGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLL 289
NG L+ ++ + +F L V G+G WSV MF F+L R DV DLGV++G+ L
Sbjct: 317 NGDLTTPFLLTASYEEVFDSLIQVRGLGKWSVEMFACFALKRLDVFSTGDLGVQRGMAAL 376
Query: 290 YS--LEELPRP---------------SQMDQLCEKWRPYRSVASWYLWR 321
+E+L + +M+++ EK+ PYR++ WY+WR
Sbjct: 377 VGRDVEKLKKAGKGAKGGGKWKYMSEKEMEEIAEKFSPYRTIFMWYMWR 425
>gi|212704565|ref|ZP_03312693.1| hypothetical protein DESPIG_02625 [Desulfovibrio piger ATCC 29098]
gi|212671964|gb|EEB32447.1| base excision DNA repair protein, HhH-GPD family [Desulfovibrio
piger ATCC 29098]
Length = 269
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 105/192 (54%), Gaps = 4/192 (2%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+AA+ HL D++LA+ + P + F AL +I QQ++ A +++ R AL
Sbjct: 48 QAAVEHLARKDKKLAAAMQAIGPVRREVMPDLFQALMHAITGQQISMAAQRTVWGRLCAL 107
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
G V P+ +LA P L+ +G+S RK Y+ +AR+ +G L + +DD +
Sbjct: 108 LGE---VTPQALLAQPPAALQALGLSARKVDYMRGIARQVVDGELDLPGMAALDDAEVCR 164
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
L + GIG W+ M ++FSL RPD+L +DL +R+G+++LY +E+PR
Sbjct: 165 RLAALRGIGVWTAEMLLLFSLQRPDILSYDDLAIRRGLRMLYRHKEMPRERFERYRRRF- 223
Query: 309 RPYRSVASWYLW 320
PY S+AS YLW
Sbjct: 224 SPYGSLASLYLW 235
>gi|333915756|ref|YP_004489488.1| HhH-GPD family protein [Delftia sp. Cs1-4]
gi|333745956|gb|AEF91133.1| HhH-GPD family protein [Delftia sp. Cs1-4]
Length = 269
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 109/199 (54%), Gaps = 13/199 (6%)
Query: 131 AIRHLRNADRQLASLI----DIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFI 186
A R L DR + LI + P D+F T L RSI+ QQ++ KA +++ +F
Sbjct: 74 ACRQLVRRDRVMKRLIPRFAHLALQPGGDAFAT----LARSIVGQQISMKAAQTLWNKFA 129
Query: 187 ALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSL 246
L + P+ VL L +R +G+S RK YL DLA + L M D+++
Sbjct: 130 RL---PVRMAPDLVLKLKVDDMRAVGLSARKVDYLVDLAMHFTEHRLHQDDWQGMSDEAI 186
Query: 247 FTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV-QLLYSLEELPRPSQMDQLC 305
L + G+G W+ MF+IF L RP+VLP++D G+ G+ Q +S + + R S+ ++
Sbjct: 187 VAELMSIRGVGRWTAEMFLIFYLQRPNVLPLDDAGLISGISQNYFSGDPVSR-SEAREVA 245
Query: 306 EKWRPYRSVASWYLWRFVE 324
E W+P+ +VA+WY+WR +E
Sbjct: 246 EAWKPWCTVATWYIWRSLE 264
>gi|297531278|ref|YP_003672553.1| HhH-GPD family protein [Geobacillus sp. C56-T3]
gi|297254530|gb|ADI27976.1| HhH-GPD family protein [Geobacillus sp. C56-T3]
Length = 288
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 94/169 (55%), Gaps = 5/169 (2%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSG 215
+ L + +++QQL K G + RF+ G E V PE V A + LR + +SG
Sbjct: 120 YFCLMKCLIHQQLHLKVGYRLTERFVKAFGEERDGVWFYPRPEEVAARSYDDLRALQLSG 179
Query: 216 RKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVL 275
RKA Y+ D++R G L + M+D + LT V GIG W+V F++F L RP+V
Sbjct: 180 RKAEYIVDVSRLIAEGKLRLDELEQMEDGEVMEKLTAVRGIGPWTVQNFLLFGLGRPNVF 239
Query: 276 PINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
P D+G+++ V+ + L + P +M L E+W+PY S A+ YLWR +E
Sbjct: 240 PPADIGLQRAVEKWFGLPKRPTTKEMAALSERWKPYASYAALYLWRSIE 288
>gi|354611154|ref|ZP_09029110.1| HhH-GPD family protein [Halobacterium sp. DL1]
gi|353195974|gb|EHB61476.1| HhH-GPD family protein [Halobacterium sp. DL1]
Length = 191
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 99/191 (51%), Gaps = 6/191 (3%)
Query: 135 LRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAG 194
L AD ++A L+ H D F L SIL QQ++ + +I R
Sbjct: 7 LLRADPEMAPLVAEHGELELDLVEDTFQRLVTSILRQQVSIASADAIEERLF----DRFE 62
Query: 195 VVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVN 254
V P + A P L+ +G+S KA Y+ ++A Y+ + ++ D ++ LT +
Sbjct: 63 VTPAVIAAADPLALQDVGLSAAKADYVQNVATAYRERGYDRAFFADLSDDAVHDELTSIA 122
Query: 255 GIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSV 314
G+G W+ MF++F+L R DV P+ DLG+RKG++ LY E ++M + E+WRP RS
Sbjct: 123 GVGPWTADMFLMFALGREDVFPVGDLGIRKGMEALYGAE--TTRAEMRDIAERWRPVRSY 180
Query: 315 ASWYLWRFVEA 325
AS YLWR E
Sbjct: 181 ASLYLWRAYEG 191
>gi|330936529|ref|XP_003305427.1| hypothetical protein PTT_18264 [Pyrenophora teres f. teres 0-1]
gi|311317568|gb|EFQ86487.1| hypothetical protein PTT_18264 [Pyrenophora teres f. teres 0-1]
Length = 438
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 156/346 (45%), Gaps = 47/346 (13%)
Query: 8 QTQNQPEPQPEPETQPPPNQDSTTALAVIPVQTETANNATITHANVTPQTSSPPSKIPLR 67
+ + + P E +PPP + +A+ ++ T + P+T P + R
Sbjct: 102 KKKRKSGPAAESPLKPPPFTSTPSAINLVSTSTSARH----------PETDHPFDSLSSR 151
Query: 68 PRKIRK----LSPDNGVDQAS---SSQPTESSKATSAKSTKSRAIQQQQQTLTVPRIIAR 120
P LS NG S +S P + + AK +++ + L P + A
Sbjct: 152 PAAPHATNAPLSTPNGSHTVSAYPTSSPVKPEDTSPAK-------RRKAKELVPPDVGAI 204
Query: 121 PLSS---EGEVEAAIRHLRNADRQLASLI-----DIHPPPTFDSFHTPFLALTRSILYQQ 172
P +S E ++ A L D ++ +L+ +I P PF AL+ I+ QQ
Sbjct: 205 PNASTNVERLLKDAEEFLVKVDPKMEALVKKHHCEIFSPEGLREVVDPFTALSSGIIGQQ 264
Query: 173 LAFKAGTSIYTRFIAL--CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQN 230
++ KA +SI +F AL A P VL L LR G+S RKA Y+ LA K+ +
Sbjct: 265 VSGKAASSIRAKFTALFPTTHPAFPTPTQVLQLDIPTLRTAGLSQRKAEYITGLAEKFCS 324
Query: 231 GILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLY 290
G LS IV+ D+ L L V G+G WSV MF F L R DV DLGV++G+ +Y
Sbjct: 325 GELSAEMIVSASDEELIEKLVAVRGLGRWSVEMFACFGLKRMDVFSTGDLGVQRGMA-VY 383
Query: 291 SLEELPR------------PSQMDQLCEKWRPYRSVASWYLWRFVE 324
+ ++ + +M + K+ PYRS+ WY+WR V+
Sbjct: 384 AGRDVNKLKAKGGKWKYMTEREMLDIAAKFSPYRSLFMWYMWRIVD 429
>gi|28950140|emb|CAD70998.1| conserved hypothetical protein [Neurospora crassa]
Length = 408
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 137/322 (42%), Gaps = 79/322 (24%)
Query: 53 VTPQTSSPPSKIPLRPRKIRKLSPDNGVDQASSSQPTESSKATSAKSTKSRAIQQQQQTL 112
++PQTS S P+RPR IR +G+ + P ++K + + +T
Sbjct: 109 LSPQTSRVVSSSPIRPRDIR-----DGLSPSKPQAPGWTTKDSESTTT------------ 151
Query: 113 TVPRIIARPLSSEGEVEAAIRHLRNADRQLASLIDIHP-----PPTFDSFHTPFLALTRS 167
E +E A HL D ++ LID HP P PF +L S
Sbjct: 152 ------------ENILEKACAHLIAIDPRMKPLIDKHPCRVFSPEGLAEQIDPFESLVSS 199
Query: 168 ILYQQLAFKAGTSIYTRFIALC------------GGEAGVV----------------PET 199
I+ QQ++ A SI +F+AL G E P
Sbjct: 200 IISQQVSGAAAKSIKAKFVALFEEEDDPPSDQEDGKEKKKTQENDPTPTPTKRRFPTPAH 259
Query: 200 VLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSW 259
+LA LR G+S RKA Y+H LA K+ +G LS S + + + L L V G+G W
Sbjct: 260 ILAKDLPTLRTAGLSQRKAEYIHGLAAKFASGELSASLLASAPYEELVAKLVAVRGLGLW 319
Query: 260 SVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLE-----------------ELPRPSQMD 302
+V MF F+L R DV + DLGV++G+ + + ++M
Sbjct: 320 TVEMFACFALKRMDVFSLGDLGVQRGMAAFVGRDVKKLKNGGNGNGKDKKWKYMSEAEMR 379
Query: 303 QLCEKWRPYRSVASWYLWRFVE 324
++ E++RPYRS+ WY+WR E
Sbjct: 380 EISERFRPYRSLFMWYMWRVEE 401
>gi|170701541|ref|ZP_02892491.1| HhH-GPD family protein [Burkholderia ambifaria IOP40-10]
gi|170133535|gb|EDT01913.1| HhH-GPD family protein [Burkholderia ambifaria IOP40-10]
Length = 172
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 98/169 (57%), Gaps = 3/169 (1%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
PF+ L RS++ QQ++ + +++ R C + P+ V+ L +L G+S RK
Sbjct: 6 PFVTLARSVVGQQISVPSAQALWARIEDAC---PKLAPQPVIRLGADKLIACGLSKRKTE 62
Query: 220 YLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIND 279
Y+ DLA+ + +G L +MDD+ + LT + GI W+ MF+IF+L RPDVLP++D
Sbjct: 63 YILDLAQHFVSGALHVDKWTSMDDEDVIAELTQIRGISRWTAEMFLIFNLSRPDVLPLDD 122
Query: 280 LGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAKGA 328
G+ + + + Y E S+ ++ W P+R+VA+WY+WR ++A A
Sbjct: 123 PGLIRAISVNYFSGEPVTRSEAREVAANWEPWRTVATWYMWRSLDAPDA 171
>gi|448236703|ref|YP_007400761.1| putative DNA glycosylase [Geobacillus sp. GHH01]
gi|445205545|gb|AGE21010.1| putative DNA glycosylase [Geobacillus sp. GHH01]
Length = 288
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 94/169 (55%), Gaps = 5/169 (2%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSG 215
+ L + +++QQL K G + RF+ G E V PE V A + LR + +SG
Sbjct: 120 YFCLMKCLIHQQLHLKVGYRLTERFVKAFGEERDGVWFYPRPEEVAARSYDDLRALQLSG 179
Query: 216 RKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVL 275
RKA Y+ D++R G L + M+D + LT V GIG W+V F++F L RP+V
Sbjct: 180 RKAEYIVDVSRLIAEGKLRLDELEQMEDGEVMERLTAVRGIGPWTVQNFLLFGLGRPNVF 239
Query: 276 PINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
P D+G+++ V+ + L + P +M L E+W+PY S A+ YLWR +E
Sbjct: 240 PPADIGLQRAVEKWFGLPKRPTVKEMAALSERWKPYASYAALYLWRSIE 288
>gi|448328235|ref|ZP_21517549.1| HhH-GPD family protein [Natrinema versiforme JCM 10478]
gi|445616422|gb|ELY70049.1| HhH-GPD family protein [Natrinema versiforme JCM 10478]
Length = 196
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 98/179 (54%), Gaps = 3/179 (1%)
Query: 142 LASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVL 201
+A LID H P + + L SI+ QQL+ + ++ R L GE V PE VL
Sbjct: 15 MAELIDRHDPYVEQDW-DEYERLCISIINQQLSTASAAAVRDRVFELFRGE--VTPEAVL 71
Query: 202 ALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSV 261
+ L G+S K YL + AR ++ + + + ++++ LT + GIG W+
Sbjct: 72 DAEDEALLGAGLSRSKVEYLRNAARAFRENDFTREGLADHSNEAVVDALTEIKGIGPWTA 131
Query: 262 HMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLW 320
M+++F L R DVLP+ DL VR+ ++ LY E ++M ++ E+WRPYRSVA+ YLW
Sbjct: 132 RMYLLFVLEREDVLPLGDLAVRRAIEGLYGDGEEMTRAEMREVAEQWRPYRSVATRYLW 190
>gi|398334784|ref|ZP_10519489.1| DNA-3-methyladenine glycosylase II [Leptospira kmetyi serovar
Malaysia str. Bejo-Iso9]
Length = 235
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 105/198 (53%), Gaps = 1/198 (0%)
Query: 128 VEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIA 187
++ A LR D LID P + +P+ L +S+L QQL+ K + R IA
Sbjct: 34 LKKATDWLRKKDPITKRLIDGVGPCKLQTIGSPYQVLIKSVLGQQLSTKVALTFERRLIA 93
Query: 188 LCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLF 247
L GG PE +L + ++R+IGVS K + +A Y + ++DS + ++D ++
Sbjct: 94 LAGGRKIPSPEQILEIPNSKMREIGVSQAKTETIKRVAEAYNDRAITDSKLRKLEDLNVL 153
Query: 248 TMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEK 307
+L + G+G W+ M +IF+L R D INDL +RK V+ Y + + ++ Q +
Sbjct: 154 ELLCSLKGVGPWTAEMVLIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIIQFLKN 212
Query: 308 WRPYRSVASWYLWRFVEA 325
+ PYR++ SWYLW V+
Sbjct: 213 YSPYRTILSWYLWADVDG 230
>gi|424072939|ref|ZP_17810359.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
gi|407996970|gb|EKG37423.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
Length = 221
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 105/195 (53%), Gaps = 5/195 (2%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFD---SFHTPFLALTRSILYQQLAFKAGTSIYTRFIA 187
A+ L+ DR+ LI+ H P S PF AL +++ YQQL KAG +I R A
Sbjct: 15 AVERLKAIDRRWELLIN-HVGPCLHPVTSAQDPFQALIKAVAYQQLHAKAGDAIVMRLRA 73
Query: 188 LCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSD-SAIVNMDDKSL 246
L A + ++ L Q LR G S K + +A NG++ D S + M ++ L
Sbjct: 74 LFPDTAFPAAQALIDLDEQTLRSCGFSASKCRAIKAIAVARSNGLVPDISDALAMSNEEL 133
Query: 247 FTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCE 306
L + G+G W+V M +I+ L + DV+P +D GV +G + LY+LE P +M E
Sbjct: 134 VARLVQLPGVGRWTVEMMLIYGLGQMDVMPASDYGVCEGYRRLYALELKPGHKEMAARAE 193
Query: 307 KWRPYRSVASWYLWR 321
++ P+R+VA+WYLWR
Sbjct: 194 RFAPFRTVAAWYLWR 208
>gi|261418754|ref|YP_003252436.1| DNA-3-methyladenine glycosylase II [Geobacillus sp. Y412MC61]
gi|319765570|ref|YP_004131071.1| HhH-GPD family protein [Geobacillus sp. Y412MC52]
gi|261375211|gb|ACX77954.1| DNA-3-methyladenine glycosylase II [Geobacillus sp. Y412MC61]
gi|317110436|gb|ADU92928.1| HhH-GPD family protein [Geobacillus sp. Y412MC52]
Length = 288
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 94/169 (55%), Gaps = 5/169 (2%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSG 215
+ L + +++QQL K G + RF+ G E V PE V A + LR + +SG
Sbjct: 120 YFCLMKCLIHQQLHLKVGYRLTERFVKAFGEERDGVWFYPRPEEVAARSYDDLRALQLSG 179
Query: 216 RKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVL 275
RKA Y+ D++R G L + M+D + LT V GIG W+V F++F L RP+V
Sbjct: 180 RKAEYIVDVSRLIAEGKLRLDELKQMEDGEVMEKLTAVRGIGPWTVQNFLLFGLGRPNVF 239
Query: 276 PINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
P D+G+++ V+ + L + P +M L E+W+PY S A+ YLWR +E
Sbjct: 240 PPADIGLQRAVEKWFGLPKRPTVKEMAALSERWKPYASYAALYLWRSIE 288
>gi|440746381|ref|ZP_20925665.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae BRIP39023]
gi|440371181|gb|ELQ08031.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae BRIP39023]
Length = 221
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 112/197 (56%), Gaps = 9/197 (4%)
Query: 131 AIRHLRNADRQLASLID-----IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRF 185
A+ LR+ D Q SLID +HP + PF AL +++ YQQL +AG ++ R
Sbjct: 15 AVAALRSIDPQWQSLIDQVGPCLHP---VSAAQDPFQALVKAVAYQQLHARAGDAMVMRL 71
Query: 186 IALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSD-SAIVNMDDK 244
AL ++ + ++ L Q LR G S K + +A +G++ + SA + M ++
Sbjct: 72 RALFVDDSFPGAQALVELDDQALRSCGFSASKCRAIKAIAAARVDGLVPEVSAALAMGNE 131
Query: 245 SLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQL 304
+L L + G+G W+V M +I+ L + DV+P +D GV +G + LY+LE P QM +L
Sbjct: 132 ALVERLIQLPGVGRWTVEMMLIYGLGQLDVMPASDFGVCEGYRRLYALELKPSHRQMARL 191
Query: 305 CEKWRPYRSVASWYLWR 321
E++ PYR++A+WYLWR
Sbjct: 192 AERFAPYRTIAAWYLWR 208
>gi|375007331|ref|YP_004980963.1| DNA-3-methyladenine glycosylase yfjP [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|359286179|gb|AEV17863.1| DNA-3-methyladenine glycosylase yfjP [Geobacillus thermoleovorans
CCB_US3_UF5]
Length = 288
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 95/169 (56%), Gaps = 5/169 (2%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSG 215
+ L + +++QQL K G + RF+ G E V PE + A + + LR + +SG
Sbjct: 120 YFCLVKCLIHQQLHLKVGYRLTERFVKTFGEERDGVWFYPRPEEIAARSYEDLRALQLSG 179
Query: 216 RKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVL 275
RKA Y+ +++R G L + M+D + LT V GIG W+V F++F L RP+V
Sbjct: 180 RKAEYIVNVSRLIAEGKLRLDELEQMEDGEVMERLTAVRGIGPWTVQNFLLFGLGRPNVF 239
Query: 276 PINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
P D+G+++ V+ + L + P +M L E+W+PY S A+ YLWR +E
Sbjct: 240 PPADIGLQRAVEKWFGLPKRPTTKEMAALGERWKPYASYAALYLWRSIE 288
>gi|373857736|ref|ZP_09600476.1| HhH-GPD family protein [Bacillus sp. 1NLA3E]
gi|372452407|gb|EHP25878.1| HhH-GPD family protein [Bacillus sp. 1NLA3E]
Length = 288
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 104/204 (50%), Gaps = 11/204 (5%)
Query: 128 VEAAIRHLRNADRQLASLIDIH--PPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRF 185
+E RH + QL L H P D P+ L + I++QQL ++ TRF
Sbjct: 89 LEDVHRHFQKT--QLKDLFSEHYGTPLVLD--FDPYGCLLKCIIHQQLNMAFAHTLSTRF 144
Query: 186 IALCGGEAGVV-----PETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVN 240
+ G E V PE V + +QLR++ SGRKA Y+ + + G L+ I
Sbjct: 145 VKTFGFEVDGVWFYPRPEVVAGIEVEQLRELQFSGRKAEYVIGIGKAIAQGELNLEKIKQ 204
Query: 241 MDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQ 300
+ D+ + L + G+G W+V F++F L RP++ PI D+G++ ++ LY+L+ P +
Sbjct: 205 LSDEEILAQLVKLRGVGPWTVQNFLMFGLGRPNLFPIADIGIQNALKKLYNLDRKPTEEE 264
Query: 301 MDQLCEKWRPYRSVASWYLWRFVE 324
M+ W PY S AS YLWR +E
Sbjct: 265 MENFKLGWDPYLSYASLYLWRSIE 288
>gi|164423749|ref|XP_960805.2| hypothetical protein NCU08938 [Neurospora crassa OR74A]
gi|157070220|gb|EAA31569.2| hypothetical protein NCU08938 [Neurospora crassa OR74A]
Length = 468
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 137/322 (42%), Gaps = 79/322 (24%)
Query: 53 VTPQTSSPPSKIPLRPRKIRKLSPDNGVDQASSSQPTESSKATSAKSTKSRAIQQQQQTL 112
++PQTS S P+RPR IR +G+ + P ++K + + +T
Sbjct: 169 LSPQTSRVVSSSPIRPRDIR-----DGLSPSKPQAPGWTTKDSESTTT------------ 211
Query: 113 TVPRIIARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFH-----TPFLALTRS 167
E +E A HL D ++ LID HP F PF +L S
Sbjct: 212 ------------ENILEKACAHLIAIDPRMKPLIDKHPCRVFSPEGLAEQIDPFESLVSS 259
Query: 168 ILYQQLAFKAGTSIYTRFIALC------------GGEAGVV----------------PET 199
I+ QQ++ A SI +F+AL G E P
Sbjct: 260 IISQQVSGAAAKSIKAKFVALFEEEDDPPSDQEDGKEKKKTQENDPTPTPTKRRFPTPAH 319
Query: 200 VLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSW 259
+LA LR G+S RKA Y+H LA K+ +G LS S + + + L L V G+G W
Sbjct: 320 ILAKDLPTLRTAGLSQRKAEYIHGLAAKFASGELSASLLASAPYEELVAKLVAVRGLGLW 379
Query: 260 SVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLE-----------------ELPRPSQMD 302
+V MF F+L R DV + DLGV++G+ + + ++M
Sbjct: 380 TVEMFACFALKRMDVFSLGDLGVQRGMAAFVGRDVKKLKNGGNGNGKDKKWKYMSEAEMR 439
Query: 303 QLCEKWRPYRSVASWYLWRFVE 324
++ E++RPYRS+ WY+WR E
Sbjct: 440 EISERFRPYRSLFMWYMWRVEE 461
>gi|346970090|gb|EGY13542.1| DNA-3-methyladenine glycosylase [Verticillium dahliae VdLs.17]
Length = 405
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 150/329 (45%), Gaps = 36/329 (10%)
Query: 24 PPNQDSTTALAVIPVQ-TETANNATITHANVT---PQTSSPPSKIPLRPRKIRKLSPDNG 79
PP + + A A PV T +A + N T P+T++ P + LSP++
Sbjct: 53 PPGKRTQRAAAAPPVTPTPSAVSLIAERINGTAEKPRTAAAPRLADPKRTNAPLLSPESS 112
Query: 80 --VDQASSSQPTESSKATSAKSTKSRAIQQQQQTLTVPRIIARPLSSEGEVEAAIRHLRN 137
V A + QP+ +S + +A+ + ++ V + ++P ++E + A HL
Sbjct: 113 RLVATALAVQPSSASPSKAARLAPTSSL--------VSEVNSQPTTTENILAEACAHLIR 164
Query: 138 ADRQLASLIDIHPPPTFD-----SFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGE 192
D ++ +LID HP F PF +L I+ QQ++ A SI +F+AL
Sbjct: 165 VDPRMKALIDKHPCKVFSPEGLAEKIDPFESLCSGIISQQVSGAAAKSIKAKFVALFTAS 224
Query: 193 AGVV-----PETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLF 247
V P V A + + LR G+S RKA Y+ +A K+ +G LS + +
Sbjct: 225 DLVDGRFPHPSQVAAQSVEHLRTAGLSQRKAEYVKGIAEKFASGELSAEMLAGAPYAEVL 284
Query: 248 TMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLE------------EL 295
L + G+G WSV MF F+L R DV + DLGV++G+ + +
Sbjct: 285 EKLIAIRGLGQWSVEMFACFALKRMDVFSLGDLGVQRGMAAFEGRDVAKLKAKGGGKWKY 344
Query: 296 PRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
M + +K+ PYRSV WY+WR E
Sbjct: 345 MSEKDMIDMSDKFAPYRSVFMWYMWRVEE 373
>gi|344167473|emb|CCA79702.1| na-3-methyladenine glycosylase protein [blood disease bacterium
R229]
Length = 212
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 93/165 (56%), Gaps = 3/165 (1%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R+I YQQL +AG +I R +AL G P +L LR G S K +
Sbjct: 46 PYEALVRAIAYQQLHARAGDAILGRLLALYPGVDFPSPGQLLDTGEATLRGCGFSATKLA 105
Query: 220 YLHDLARKYQNGIL--SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPI 277
+ LA+ +G++ D A+ M D++L L + G+G W+V M +I++L R D+LP
Sbjct: 106 TIRGLAQATLDGVVPTRDEALA-MPDEALVERLVTLRGVGRWTVEMLLIYTLERADILPA 164
Query: 278 NDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRF 322
+D GVR+G + L LE QM ++ W PYR++A+WYLWR
Sbjct: 165 DDFGVREGYRRLKRLESALTRKQMIEIGRAWSPYRTIAAWYLWRM 209
>gi|300690563|ref|YP_003751558.1| na-3-methyladenine glycosylase protein [Ralstonia solanacearum
PSI07]
gi|299077623|emb|CBJ50258.1| na-3-methyladenine glycosylase protein [Ralstonia solanacearum
PSI07]
Length = 212
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 93/165 (56%), Gaps = 3/165 (1%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R+I YQQL +AG +I R +AL G P +L LR G S K +
Sbjct: 46 PYEALVRAIAYQQLHARAGDAILGRLLALYPGVDFPSPGQLLDTGEATLRGCGFSATKLA 105
Query: 220 YLHDLARKYQNGIL--SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPI 277
+ LA+ +G++ D A+ M D++L L + G+G W+V M +I++L R D+LP
Sbjct: 106 TIRGLAQATLDGVVPTRDEALA-MPDEALVERLVTLRGVGRWTVEMLLIYTLERADILPA 164
Query: 278 NDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRF 322
+D GVR+G + L LE QM ++ W PYR++A+WYLWR
Sbjct: 165 DDFGVREGYRRLKRLESALTRKQMIEIGRAWSPYRTIAAWYLWRM 209
>gi|406894572|gb|EKD39358.1| HhH-GPD family protein [uncultured bacterium]
Length = 200
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 109/193 (56%), Gaps = 9/193 (4%)
Query: 134 HLRNADRQLASLIDIHPPPT-FDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGE 192
HL AD L+ LI T F + P+ L RSI+ QQL+ K +I R +AL
Sbjct: 16 HLSAADPILSQLIVKFGKCTLFQRNYDPYGTLVRSIISQQLSAKVADTIEGRVLALV--- 72
Query: 193 AGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTM 252
P +L + +LR+ G+SG K+ Y+H+L+ + +G ++ + + +L+
Sbjct: 73 QDFNPANILEIPIDRLREAGLSGAKSRYIHELSSRVIDGRMNFDDLHAKSNDEAIAILSE 132
Query: 253 VNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYR 312
+ G+G W+ MF+IF L R DVL D G+++ V+LLY + +++ +KW+P+R
Sbjct: 133 LPGVGRWTAEMFLIFGLGRSDVLAQGDAGLKRAVRLLYG-----EKAVFEKVGKKWKPFR 187
Query: 313 SVASWYLWRFVEA 325
SVASWYLW+++++
Sbjct: 188 SVASWYLWKYLDS 200
>gi|398340862|ref|ZP_10525565.1| DNA-3-methyladenine glycosylase II [Leptospira kirschneri serovar
Bim str. 1051]
gi|418677766|ref|ZP_13239040.1| base excision DNA repair protein, HhH-GPD family [Leptospira
kirschneri serovar Grippotyphosa str. RM52]
gi|418684996|ref|ZP_13246178.1| base excision DNA repair protein, HhH-GPD family [Leptospira
kirschneri serovar Grippotyphosa str. Moskva]
gi|418742791|ref|ZP_13299160.1| base excision DNA repair protein, HhH-GPD family [Leptospira
kirschneri serovar Valbuzzi str. 200702274]
gi|421092028|ref|ZP_15552789.1| base excision DNA repair protein, HhH-GPD family [Leptospira
kirschneri str. 200802841]
gi|400320956|gb|EJO68816.1| base excision DNA repair protein, HhH-GPD family [Leptospira
kirschneri serovar Grippotyphosa str. RM52]
gi|409999285|gb|EKO49980.1| base excision DNA repair protein, HhH-GPD family [Leptospira
kirschneri str. 200802841]
gi|410740404|gb|EKQ85120.1| base excision DNA repair protein, HhH-GPD family [Leptospira
kirschneri serovar Grippotyphosa str. Moskva]
gi|410749534|gb|EKR06518.1| base excision DNA repair protein, HhH-GPD family [Leptospira
kirschneri serovar Valbuzzi str. 200702274]
Length = 228
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 104/203 (51%), Gaps = 1/203 (0%)
Query: 123 SSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIY 182
S E ++ A LR D L+D P + TP+ L +S+L QQL+ K +
Sbjct: 22 SREVRLKKASNWLRKKDPITKKLVDSIGPCKLKTIGTPYQVLIKSVLGQQLSVKVALTFE 81
Query: 183 TRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMD 242
R I+L G + PE +L + ++R+IGVS K + +A Y ++DS + ++
Sbjct: 82 RRLISLAGSKKIPSPEQILKIPNDEMRKIGVSQAKTETIKRIAEAYLKRSITDSKLRKLE 141
Query: 243 DKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMD 302
D + +L + G+G W+ M +IF+L R D INDL +RK V+ Y + + ++
Sbjct: 142 DSDVLKLLCSIKGVGPWTAEMVLIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIQ 200
Query: 303 QLCEKWRPYRSVASWYLWRFVEA 325
L + PYR++ SWYLW ++
Sbjct: 201 LLLNTYSPYRTIISWYLWADIDG 223
>gi|298157816|gb|EFH98895.1| DNA-3-methyladenine glycosylase II [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 221
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 112/197 (56%), Gaps = 9/197 (4%)
Query: 131 AIRHLRNADRQLASLID-----IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRF 185
A+ LR+ D Q SLID +HP + PF AL +++ YQQL +AG ++ R
Sbjct: 15 AVAALRSIDPQWQSLIDQVGPCLHP---VSAAQDPFQALVKAVAYQQLHARAGDAMVMRL 71
Query: 186 IALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSD-SAIVNMDDK 244
AL ++ + ++ L Q LR G S K + +A +G++ + SA + M ++
Sbjct: 72 RALFVDDSFPGAQALVELDDQALRSCGFSASKCRAIKAIAAARVDGLVPEVSAALAMGNE 131
Query: 245 SLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQL 304
+L L + G+G W+V M +I+ L + DV+P +D GV +G + LY+LE P QM +L
Sbjct: 132 ALVERLIQLPGVGRWTVEMMLIYGLGQLDVMPASDFGVCEGYRRLYALELKPSHRQMARL 191
Query: 305 CEKWRPYRSVASWYLWR 321
E++ PYR++A+WYLWR
Sbjct: 192 AERFAPYRTIAAWYLWR 208
>gi|340515358|gb|EGR45613.1| predicted protein [Trichoderma reesei QM6a]
Length = 353
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 106/217 (48%), Gaps = 20/217 (9%)
Query: 128 VEAAIRHLRNADRQLASLIDIHPPPTFDSFH-----TPFLALTRSILYQQLAFKAGTSIY 182
++ A HL D ++ LI+ H F + PF +L SI+ QQ++ A SI
Sbjct: 130 LKEACDHLIKVDERMRPLIEKHHCHVFSAEGLAEKIDPFESLVSSIISQQVSGAAAKSIK 189
Query: 183 TRFIALCGGEAGV----VPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAI 238
+FI L E P V A + ++LR G+S RKA Y+ LA K+ +G ++ +
Sbjct: 190 NKFIGLFFPEGQTRIFPTPSEVAACSIERLRTAGLSQRKAEYVQGLAEKFASGEITAQML 249
Query: 239 VNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLE----- 293
+ D+ L L V G+G WSV MF F+L R DV + DLGV++G+ +
Sbjct: 250 HDAPDEELMERLIAVRGLGKWSVEMFACFALKRMDVFSLGDLGVQRGMAAFVGRDVAKLK 309
Query: 294 ------ELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
+ M +L +K+ PYRSV WY+WR E
Sbjct: 310 NKGGKWKYMSEQDMVELSDKFSPYRSVFMWYMWRVEE 346
>gi|367039099|ref|XP_003649930.1| hypothetical protein THITE_2109071 [Thielavia terrestris NRRL 8126]
gi|346997191|gb|AEO63594.1| hypothetical protein THITE_2109071 [Thielavia terrestris NRRL 8126]
Length = 389
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 106/235 (45%), Gaps = 38/235 (16%)
Query: 128 VEAAIRHLRNADRQLASLIDIH-----PPPTFDSFHTPFLALTRSILYQQLAFKAGTSIY 182
+E A HL D ++ LID H P PF AL SI+ QQ++ A SI
Sbjct: 148 LEEACAHLIKVDPRMKPLIDKHYCRMFSPEGLAEQIDPFEALCSSIISQQVSGAAAKSIK 207
Query: 183 TRFIALCGGEAGV--------------------VPETVLALTPQQLRQIGVSGRKASYLH 222
RFIAL +G PE V A +LR G+S RKA Y+
Sbjct: 208 ARFIALFNSGSGPNAADGPADDNDGPGTRASFPRPEEVAATPLDRLRTAGLSQRKAEYIQ 267
Query: 223 DLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGV 282
LA K+ G L+ + + D L LT V G+G WS MF F+L R DV + DLGV
Sbjct: 268 GLAAKFGTGELTAQMLADAPDDELLARLTAVRGLGRWSAEMFACFALKRMDVFSLGDLGV 327
Query: 283 RKGVQLLYSLE-------------ELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
++G+ + + +M ++ +++RP+RS+ WY+WR E
Sbjct: 328 QRGMAAFVGRDVAKLKAKGAGGKWKYMSEREMVEISDRFRPFRSLFMWYMWRVEE 382
>gi|222111281|ref|YP_002553545.1| hhh-gpd family protein [Acidovorax ebreus TPSY]
gi|221730725|gb|ACM33545.1| HhH-GPD family protein [Acidovorax ebreus TPSY]
Length = 219
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 103/194 (53%), Gaps = 5/194 (2%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
E A RHL DR + LI F L RSI+ QQ++ + ++ +F AL
Sbjct: 21 EEACRHLTKKDRVMRRLIPQVGNVALSQRGDAFTTLARSIVGQQVSVASAQRVWDQFAAL 80
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
+ P +VL L +R G+S RK YL DLA + +G L MDD+++
Sbjct: 81 ---SRSMTPRSVLKLKVDDMRAAGLSARKVEYLVDLALHFDSGRLHVKQWDEMDDQAIVA 137
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV-QLLYSLEELPRPSQMDQLCEK 307
L + GI W+ MF+IF L RP+VLP++D + +G+ Q +S + + R S ++ +
Sbjct: 138 ELVAIRGISRWTADMFLIFHLARPNVLPLDDATLIQGISQHYFSGDPVSR-SDAREVADA 196
Query: 308 WRPYRSVASWYLWR 321
W+P+ SVASWY+WR
Sbjct: 197 WKPWCSVASWYIWR 210
>gi|336472053|gb|EGO60213.1| hypothetical protein NEUTE1DRAFT_127140 [Neurospora tetrasperma
FGSC 2508]
gi|350294742|gb|EGZ75827.1| DNA glycosylase [Neurospora tetrasperma FGSC 2509]
Length = 480
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 135/319 (42%), Gaps = 76/319 (23%)
Query: 53 VTPQTSSPPSKIPLRPRKIRKLSPDNGVDQASSSQPTESSKATSAKSTKSRAIQQQQQTL 112
++PQTS S P++PR I+ D S S+P AT + + T
Sbjct: 184 LSPQTSRVVSSSPIKPRDIQ--------DSLSPSKPKAPGVAT----------KDSESTT 225
Query: 113 TVPRIIARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFH-----TPFLALTRS 167
T E +E A HL D ++ LID HP F PF +L S
Sbjct: 226 T-----------ENILEKACAHLIAIDPRMKPLIDKHPCRVFSPEGLAEQIDPFESLVSS 274
Query: 168 ILYQQLAFKAGTSIYTRFIALCGGEAGV-------------------------VPETVLA 202
I+ QQ++ A SI +F+AL E P VLA
Sbjct: 275 IISQQVSGAAAKSIKAKFVALFEEEDDPPSDQKEDKEKKTQENDPTPTKRRFPTPAHVLA 334
Query: 203 LTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVH 262
LR G+S RKA Y+H LA K+ +G LS S + + + L L V G+G W+V
Sbjct: 335 KDLPTLRTAGLSQRKAEYIHGLAAKFASGELSASLLASAPYEELVAKLVAVRGLGLWTVE 394
Query: 263 MFMIFSLHRPDVLPINDLGVRKGVQLLYSLE-----------------ELPRPSQMDQLC 305
MF F+L R DV + DLGV++G+ + + ++M ++
Sbjct: 395 MFACFALKRMDVFSLGDLGVQRGMAAFVGRDVKKLKNGGNGNGKDKKWKYMSEAEMREIS 454
Query: 306 EKWRPYRSVASWYLWRFVE 324
E++RPYRS+ WY+WR E
Sbjct: 455 ERFRPYRSLFMWYMWRVEE 473
>gi|389739943|gb|EIM81135.1| DNA glycosylase [Stereum hirsutum FP-91666 SS1]
Length = 508
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 93/178 (52%), Gaps = 18/178 (10%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFH--TPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
A +HL D + + P F+ PF LT SIL QQ+++ A SI RF+ L
Sbjct: 108 AKKHLIEEDARFEDVFRRLPCKPFEKLERVEPFRTLTTSILGQQISWLAARSINHRFVRL 167
Query: 189 CGGEAGVVPET--------VLALTPQQ--------LRQIGVSGRKASYLHDLARKYQNGI 232
+ P+ L TP Q LR G+SGRKA Y+ DLA ++ +G
Sbjct: 168 YFPDLPEKPDAEYWAKAPITLFPTPHQVAVTDLNTLRTAGLSGRKAEYVQDLAARFADGR 227
Query: 233 LSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLY 290
LS + DD+ L+ +LT V GIG W+V MF IFSL RPD++P DLGV++GV +
Sbjct: 228 LSAEKLFEADDEELYELLTAVRGIGRWTVDMFAIFSLRRPDIMPYGDLGVQRGVMRWF 285
Score = 41.2 bits (95), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 298 PSQMDQLCEKWRPYRSVASWYLWRFVEAK 326
P +M++L E W+PYRS+ +Y+W E K
Sbjct: 480 PKEMEELTEGWKPYRSLGVYYMWALSEEK 508
>gi|149926800|ref|ZP_01915059.1| 3-methyladenine DNA glycosylase II [Limnobacter sp. MED105]
gi|149824352|gb|EDM83570.1| 3-methyladenine DNA glycosylase II [Limnobacter sp. MED105]
Length = 217
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 99/177 (55%), Gaps = 2/177 (1%)
Query: 145 LIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALT 204
L+ H S P+ + RS++ QQ++ KA +++ R + G+ + +LAL+
Sbjct: 34 LLARHSDRALRSRGAPYETMLRSLVGQQISVKAADAVWARVVDALNGK--ITSRALLALS 91
Query: 205 PQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMF 264
L+ G+S +K +Y L+ Q G L + + MDD++ L + G+G W+ MF
Sbjct: 92 DDTLKATGLSRQKIAYSRALSEFEQQGGLELAVLEGMDDEACTRHLCAIKGVGRWTAQMF 151
Query: 265 MIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
++F L RPDV P++D+GV++G+ + E P + Q EK +P+R+VA+WYLWR
Sbjct: 152 LMFCLRRPDVWPVDDIGVQRGISRQFFEGEPIGPKEALQFGEKLKPWRTVAAWYLWR 208
>gi|124002144|ref|ZP_01686998.1| HhH-GPD [Microscilla marina ATCC 23134]
gi|123992610|gb|EAY31955.1| HhH-GPD [Microscilla marina ATCC 23134]
Length = 207
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 98/164 (59%), Gaps = 3/164 (1%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASY 220
+LAL RSI+ QQL+ KA +IY RF L E P+ V+A L+ G+S +KA+Y
Sbjct: 32 YLALVRSIVGQQLSVKAAATIYQRFRELFP-ENYPTPKLVVAAELDTLKAAGLSKQKATY 90
Query: 221 LHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDL 280
+ ++A G L + N D+ + +L + G+G W+V M ++F+ RPDV ++DL
Sbjct: 91 IKNVAAFAIEGGLDFEVLNNQTDEEIIQVLITIKGVGRWTVEMLLMFAFQRPDVFSVDDL 150
Query: 281 GVRKGVQLLYSLEELPR--PSQMDQLCEKWRPYRSVASWYLWRF 322
G+++ V+ LY L+E + ++M + W+PYR++A YLW++
Sbjct: 151 GIQQAVKKLYQLDEEGKALKAKMKTIANAWKPYRTLACLYLWQW 194
>gi|255949860|ref|XP_002565697.1| Pc22g17880 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592714|emb|CAP99076.1| Pc22g17880 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 378
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 112/237 (47%), Gaps = 39/237 (16%)
Query: 120 RPLSSEGEV-EAAIRHLRNADRQLASLIDIHPPPTFDSFH-----TPFLALTRSILYQQL 173
RP ++ G + E A HL D ++A++I+ +P P F PF +LT SI+ QQ+
Sbjct: 137 RPTATTGTLLEKATAHLIAMDPRIATVIERNPCPLFSPAGLAEEIDPFNSLTSSIIGQQV 196
Query: 174 AFKAGTSIYTRFIALCGGEAGVVPET---VLALTPQQ--------LRQIGVSGRKASYLH 222
+ A SI +F+AL V P+ TP Q LR G+S RKA Y+
Sbjct: 197 SGAAAKSIRNKFLALFDLPDTVAPDGHRHAKFPTPDQVAKCDIATLRTAGLSQRKAEYIQ 256
Query: 223 DLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGV 282
LA K+ +G L + D+ LF L V G+G WSV MF +F+L R DV DLGV
Sbjct: 257 GLAEKFASGELGARMLARATDEELFEKLIAVRGLGRWSVEMFAMFALKRIDVFSTGDLGV 316
Query: 283 RKGVQLL-----------------YSLEELPRPSQMDQLCEKWRPYRSVASWYLWRF 322
++G Y E+ M +L K+ PYRS+ WY+WR
Sbjct: 317 QRGCAAFMGRDVSKLKGKGGGKFKYMAEK-----DMLELAAKFAPYRSLFMWYMWRI 368
>gi|319654159|ref|ZP_08008248.1| YfjP protein [Bacillus sp. 2_A_57_CT2]
gi|317394093|gb|EFV74842.1| YfjP protein [Bacillus sp. 2_A_57_CT2]
Length = 293
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 109/204 (53%), Gaps = 11/204 (5%)
Query: 128 VEAAIRHLRNADRQLASLIDIH--PPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRF 185
+E H +N +L + D H P D P+ + + I++QQL ++ RF
Sbjct: 94 LERIHEHFQNT--ELQPIFDAHYGTPIVLD--FDPYSCILKCIIHQQLNLAFAHTLTERF 149
Query: 186 IALCGGEA-GV----VPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVN 240
+ G E GV +PE V L +LR++ SGRKA Y+ +A++ +G L+ + N
Sbjct: 150 VKAFGFEKDGVWFYPLPEKVAELKVDELRELQFSGRKAEYVIGIAKETASGNLNFDELKN 209
Query: 241 MDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQ 300
+ D+ ++ L + G+G W+V F++F L RP++ P D+G++ ++ LY LE P +
Sbjct: 210 LSDEEIYDKLIKLRGVGPWTVQNFLMFGLGRPNLFPAADIGIQNALKKLYKLEAKPTLEE 269
Query: 301 MDQLCEKWRPYRSVASWYLWRFVE 324
M+ + W PY S AS YLWR +E
Sbjct: 270 METFSKSWDPYLSYASLYLWRSIE 293
>gi|17547288|ref|NP_520690.1| DNA-3-methyladenine glycosylase [Ralstonia solanacearum GMI1000]
gi|17429590|emb|CAD16276.1| probable dna-3-methyladenine glycosylase protein [Ralstonia
solanacearum GMI1000]
Length = 212
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 92/165 (55%), Gaps = 3/165 (1%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL R+I YQQL +AG +I R +A G P +L LR G S K +
Sbjct: 46 PYEALVRAIAYQQLHARAGDAILGRLLARYPGVDFPSPRQLLETDEATLRGCGFSATKLA 105
Query: 220 YLHDLARKYQNGIL--SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPI 277
+ +A+ + I+ D A+ + D++L L + G+G W+V M +I++L R D+LP
Sbjct: 106 TIRGIAQATLDSIVPTRDEALA-LPDEALIERLVTLRGVGRWTVEMLLIYTLERADILPA 164
Query: 278 NDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRF 322
+D GVR+G + L LE P QM ++ W PYR+VA+WYLWR
Sbjct: 165 DDFGVREGYRRLKRLETAPTRRQMAEIGRAWSPYRTVAAWYLWRM 209
>gi|253574190|ref|ZP_04851532.1| DNA-3-methyladenine glycosidase [Paenibacillus sp. oral taxon 786
str. D14]
gi|251846667|gb|EES74673.1| DNA-3-methyladenine glycosidase [Paenibacillus sp. oral taxon 786
str. D14]
Length = 228
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 90/163 (55%), Gaps = 3/163 (1%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASY 220
F L RSI+ QQ++ KA ++I R I L G + P +LA + LR G+S K +Y
Sbjct: 46 FTELARSIISQQISVKAASTIRGRVIELAGE---LSPAALLAQSDADLRAAGLSASKVAY 102
Query: 221 LHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDL 280
L DL+ K Q+G L + +DD+ + L V GIG WS MF+IF+L R V+ D
Sbjct: 103 LKDLSDKVQSGQLDLDRLQELDDEEVIKQLVSVKGIGRWSAEMFLIFALGREHVVSYGDA 162
Query: 281 GVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFV 323
G+++ + +Y +EE P + Q +W Y S+AS YLW +
Sbjct: 163 GLQRAAKWVYDMEERPDRKYLQQAAAQWPSYGSIASLYLWEAI 205
>gi|357032199|ref|ZP_09094139.1| DNA-3-methyladenine glycosylase [Gluconobacter morbifer G707]
gi|356414426|gb|EHH68073.1| DNA-3-methyladenine glycosylase [Gluconobacter morbifer G707]
Length = 217
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 96/177 (54%), Gaps = 9/177 (5%)
Query: 155 DSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGV------VPETVLALTPQQL 208
D P+ AL R+I QQL A I+ R AL G +G+ PET+LAL + L
Sbjct: 31 DDGQEPYDALLRAIAGQQLHGAAARKIFGRVRAL--GPSGLQDGPPPAPETLLALPEETL 88
Query: 209 RQIGVSGRKASYLHDLARKYQNGIL-SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIF 267
R G+S K + + +AR +G++ S + D L LT + GIG W+V M +IF
Sbjct: 89 RACGLSASKQTAMRGVARARLDGLVPSRDEAALLSDADLIARLTTLRGIGRWTVEMLLIF 148
Query: 268 SLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
+L+RPDV+P++D G R+G + + + P+P + E + P+RS +WY WR E
Sbjct: 149 TLNRPDVMPVDDFGAREGWRRIKGRVDAPKPRLLKAETECFAPWRSTLAWYCWRVSE 205
>gi|269122703|ref|YP_003310880.1| HhH-GPD family protein [Sebaldella termitidis ATCC 33386]
gi|268616581|gb|ACZ10949.1| HhH-GPD family protein [Sebaldella termitidis ATCC 33386]
Length = 201
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 112/187 (59%), Gaps = 4/187 (2%)
Query: 134 HLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEA 193
+L+ D++LA +ID P + F L SI+ QQ++ KA +I+ R L G
Sbjct: 13 YLKKKDKRLAEVIDRIGPVQREIIPDLFAGLVNSIVGQQISTKAFITIWNRIKDLFGT-- 70
Query: 194 GVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMV 253
V PE++L+ + ++L++ G++ +K+ Y+ ++A NG L+ + + D + L+ +
Sbjct: 71 -VTPESILSKSAEELQKCGITMKKSVYIRNIAVDIINGSLNLDELYELPDDEVCHRLSSL 129
Query: 254 NGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRS 313
NGIG+W+ M M FS+ RPD+L +DL +R+G+ +LY ++L + + ++ +++ PY S
Sbjct: 130 NGIGTWTAEMLMTFSMQRPDILSWDDLAIRRGIMMLYRHKKLDK-NLFERYKKRYSPYGS 188
Query: 314 VASWYLW 320
VAS YLW
Sbjct: 189 VASLYLW 195
>gi|121593997|ref|YP_985893.1| HhH-GPD family protein [Acidovorax sp. JS42]
gi|120606077|gb|ABM41817.1| HhH-GPD family protein [Acidovorax sp. JS42]
Length = 219
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 103/194 (53%), Gaps = 5/194 (2%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
E A RHL DR + LI F L RSI+ QQ++ + ++ +F AL
Sbjct: 21 EEACRHLTKKDRVMRRLIPQVGNVALSQRGDAFTTLARSIVGQQVSVASAQRVWDQFAAL 80
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
+ P +VL L +R G+S RK YL DLA + +G L MDD+++
Sbjct: 81 ---SRSMTPRSVLKLKVDDMRAAGLSARKVEYLVDLALHFDSGRLHVKQWDQMDDQAIVA 137
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV-QLLYSLEELPRPSQMDQLCEK 307
L + GI W+ MF+IF L RP+VLP++D + +G+ Q +S + + R S ++ +
Sbjct: 138 ELVAIRGISRWTADMFLIFHLARPNVLPLDDATLIQGISQHYFSGDPVSR-SDAREVADA 196
Query: 308 WRPYRSVASWYLWR 321
W+P+ SVASWY+WR
Sbjct: 197 WKPWCSVASWYIWR 210
>gi|336413055|ref|ZP_08593408.1| hypothetical protein HMPREF1017_00516 [Bacteroides ovatus
3_8_47FAA]
gi|335943101|gb|EGN04943.1| hypothetical protein HMPREF1017_00516 [Bacteroides ovatus
3_8_47FAA]
Length = 228
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 106/196 (54%), Gaps = 12/196 (6%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
E I +L++ D++L +ID F AL SI+ QQ+A KA +I+ + +
Sbjct: 9 EHEIAYLKSRDKRLGEIIDKVGMVKRRVIPDLFAALVHSIVGQQIATKAHETIWRKMTGV 68
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
G + PE VL L+P++L+ G++ RK + ARK +G ++ M D +
Sbjct: 69 LGE---ISPEKVLGLSPEELQAFGITFRKVDCIRSAARKIASGEFDIHSLRTMSDAEVCA 125
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
L+ ++GIG W+ M M+ SL RPDVL DL V++G+++LY ++ RP L EK+
Sbjct: 126 KLSELDGIGVWTAEMLMLHSLQRPDVLSFGDLAVQRGLRMLYHHRKITRP-----LFEKY 180
Query: 309 R----PYRSVASWYLW 320
R PY SVA YLW
Sbjct: 181 RRRYSPYGSVACIYLW 196
>gi|138894074|ref|YP_001124527.1| DNA-3-methyladenine glycosylase II [Geobacillus thermodenitrificans
NG80-2]
gi|196250257|ref|ZP_03148950.1| DNA-3-methyladenine glycosylase II [Geobacillus sp. G11MC16]
gi|134265587|gb|ABO65782.1| DNA-3-methyladenine glycosylase II [Geobacillus thermodenitrificans
NG80-2]
gi|196210146|gb|EDY04912.1| DNA-3-methyladenine glycosylase II [Geobacillus sp. G11MC16]
Length = 288
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 95/169 (56%), Gaps = 5/169 (2%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSG 215
+ L + ++QQL K G + RF+ G E V PE + A + LR + +S
Sbjct: 120 YFCLMKCFIHQQLHLKVGYRLTERFVKTFGEERDGVWFYPRPEDIAARSYDDLRALQLSR 179
Query: 216 RKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVL 275
RKA Y+ D++R +G L + M+D + LT + GIG W+V F++F L RP+V
Sbjct: 180 RKAEYIVDVSRLIADGTLRLDDLEQMEDGEVMERLTAIRGIGPWTVQNFLLFGLGRPNVF 239
Query: 276 PINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
P D+G+++ V+ L+ L + P S++ L E+W+PY S A+ YLWR +E
Sbjct: 240 PPADIGLQRAVERLFQLPKRPTASELALLGERWKPYTSYAALYLWRSIE 288
>gi|389628844|ref|XP_003712075.1| DNA-3-methyladenine glycosylase [Magnaporthe oryzae 70-15]
gi|351644407|gb|EHA52268.1| DNA-3-methyladenine glycosylase [Magnaporthe oryzae 70-15]
Length = 385
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 112/229 (48%), Gaps = 23/229 (10%)
Query: 118 IARPLSSEGEVEAAIRHLRNADRQLASLIDIH-----PPPTFDSFHTPFLALTRSILYQQ 172
I P ++ +E A HL D ++ LI+ H P PF +L I+ QQ
Sbjct: 151 IKGPTTTATLLEEACAHLIRVDPRMKPLIEAHHCHIFSPEGLAEKIDPFESLCSGIISQQ 210
Query: 173 LAFKAGTSIYTRFIALCG----GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKY 228
++ A SI +F+AL GE P +V A T ++LR G+S RKA Y+ LA K+
Sbjct: 211 VSGAAARSIKAKFVALFADEKPGELFPSPSSVAAATIEKLRTAGLSQRKAEYVKGLAEKF 270
Query: 229 QNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQL 288
+G LS ++ + + L V G+G WSV MF F L DV + DLGV++G+
Sbjct: 271 ASGELSAQLFADLPYEQVLQKLIAVRGLGRWSVEMFACFGLKFMDVFSLGDLGVQRGMA- 329
Query: 289 LYSLEELPR-------------PSQMDQLCEKWRPYRSVASWYLWRFVE 324
+S ++ + M +L ++++PYRS+ WY+WR E
Sbjct: 330 AFSGRDVAKMKNSKAGKWKYMNEKDMTELSDRFKPYRSLFMWYMWRVEE 378
>gi|399018069|ref|ZP_10720255.1| HhH-GPD superfamily base excision DNA repair protein
[Herbaspirillum sp. CF444]
gi|398102034|gb|EJL92226.1| HhH-GPD superfamily base excision DNA repair protein
[Herbaspirillum sp. CF444]
Length = 214
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 104/201 (51%), Gaps = 11/201 (5%)
Query: 129 EAAIRHLRNADRQLASLI----DIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTR 184
E A L DR + LI D+ D+F T L RSI+ QQ++ K ++ R
Sbjct: 18 EDAKAELMKRDRIMRKLIPQFGDLQLTGRGDAFTT----LARSIIGQQISTKTAQVVWQR 73
Query: 185 FIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDK 244
F+ C P VL P+ L G+S RKA Y+ DLA ++ + M+D+
Sbjct: 74 FLEEC---PKCTPLQVLKAGPENLVACGLSKRKAEYILDLANHFKAKTVHPDKWAEMEDE 130
Query: 245 SLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQL 304
+ + + G+G W+ MF+IF+L RP+VLP++D G+ KG+ Y E S ++
Sbjct: 131 DVIAEMLQIRGLGRWTAEMFLIFNLLRPNVLPLDDPGLLKGISNSYFSGEPVSRSDAREV 190
Query: 305 CEKWRPYRSVASWYLWRFVEA 325
W P+R+VA+WYLWR +++
Sbjct: 191 AANWEPWRTVATWYLWRSLDS 211
>gi|168702731|ref|ZP_02735008.1| DNA-3-methyladenine glycosylase II [Gemmata obscuriglobus UQM 2246]
Length = 227
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 103/184 (55%), Gaps = 20/184 (10%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRF------------------IALCGGEAGVVP-ETV 200
PF L R ++ QQ++ KA SIY R +A+ E G++P + +
Sbjct: 39 PFTLLVRCVIGQQISTKAAESIYNRLARAVNPPPEGPHPADGTSLAMWQRE-GIMPMDKL 97
Query: 201 LALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWS 260
AL+ + ++ GVSG K L + + +I +DD ++ LT++ GIG W+
Sbjct: 98 AALSEAEFKECGVSGPKQRTLRAVVEHARANPDLLPSIAGLDDDTIRERLTVIKGIGPWT 157
Query: 261 VHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLW 320
V M+++F L RPDVL + D G++ V+ L+ L +LP P+++ ++ + W+PYRSVA WYLW
Sbjct: 158 VDMYLLFGLGRPDVLSVGDYGIKVAVKNLFRLRKLPDPAKLTRVAKPWQPYRSVALWYLW 217
Query: 321 RFVE 324
R ++
Sbjct: 218 RSLD 221
>gi|226310513|ref|YP_002770407.1| DNA-3-methyladenine glycosylase II [Brevibacillus brevis NBRC
100599]
gi|226093461|dbj|BAH41903.1| putative DNA-3-methyladenine glycosylase II [Brevibacillus brevis
NBRC 100599]
Length = 309
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 119/230 (51%), Gaps = 24/230 (10%)
Query: 114 VPRIIARPLSSEGEVEAAIRHLRNADRQLASLID----IHPPPTFDSFHTPFLALTRSIL 169
+ ++I R S++ E+ +R + +LA L + + P D F + ++I+
Sbjct: 80 LEKMIRRTFSADLELSVIYEQMRE-EGELAILTERFRGLRPMLDADLFQ----CMVKTII 134
Query: 170 YQQLAFKAGTSIYTRFIALCG-------GEAGVV----PETVLALTPQQLRQIGVSGRKA 218
QQ+ ++ R + L G GE G++ P++V LT + LR + S RKA
Sbjct: 135 GQQINLTFAANLTERLVTLAGDPVENQNGE-GIIAFPTPDSVARLTVEDLRSLQFSQRKA 193
Query: 219 SYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
Y+ D AR N + + M+D+ + T LT + GIG W+V ++F + RPD+LP
Sbjct: 194 EYIIDFARAIVNETVDLERLWTMEDEEIITYLTSLRGIGRWTVECLLMFGMGRPDLLPAA 253
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAKGA 328
D+G+R G+ LY +E P + + +L EKW P+RS+ Y+W EA GA
Sbjct: 254 DIGLRNGIVHLYGMETKPNENDIRKLGEKWAPWRSIYCLYVW---EAVGA 300
>gi|418695201|ref|ZP_13256224.1| base excision DNA repair protein, HhH-GPD family [Leptospira
kirschneri str. H1]
gi|409957004|gb|EKO15922.1| base excision DNA repair protein, HhH-GPD family [Leptospira
kirschneri str. H1]
Length = 228
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 102/198 (51%), Gaps = 1/198 (0%)
Query: 123 SSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIY 182
S E ++ A LR D L+D + TP+ L +S+L QQL+ K +
Sbjct: 22 SREVRLKKASNWLRKKDPITKKLVDSIGLCKLKTIGTPYQVLIKSVLGQQLSVKVALTFE 81
Query: 183 TRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMD 242
R I+L G + PE +L + ++R+IGVS KA + +A Y ++DS + ++
Sbjct: 82 RRLISLAGSKKIPSPEQILKIPNDEMRKIGVSQAKAETIKRIAEAYSKRSITDSKLRKLE 141
Query: 243 DKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMD 302
D + +L + G+G W+ M +IF+L R D INDL +RK V+ Y + + ++
Sbjct: 142 DSDVLKLLCSIKGVGPWTAEMVLIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIQ 200
Query: 303 QLCEKWRPYRSVASWYLW 320
L + PYR++ SWYLW
Sbjct: 201 LLLNTYSPYRTIISWYLW 218
>gi|390456271|ref|ZP_10241799.1| HhH-GPD family protein [Paenibacillus peoriae KCTC 3763]
Length = 252
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 96/164 (58%), Gaps = 2/164 (1%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASY 220
F AL SI+ QQL+ KA T+I R LC G + PE+++++ LR G+S K Y
Sbjct: 65 FTALATSIIGQQLSSKAATTIRKRVSLLCNG--VITPESIISIPYDDLRAAGLSKAKTEY 122
Query: 221 LHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDL 280
+ DLA K + + I +D + + LT V GIG W+ MF+IF+L+R +V+ D
Sbjct: 123 IKDLAEKVYTKKIDFNEICLKEDNEIISSLTEVKGIGKWTAEMFLIFALNRVNVMSYADA 182
Query: 281 GVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
G+++ + LY+ E+P+ + + ++ W P++S+AS YLW ++
Sbjct: 183 GLQRAARWLYNSPEIPKYNYLQKVESSWEPFKSIASLYLWESID 226
>gi|445496218|ref|ZP_21463262.1| DNA-3-methyladenine glycosylase II [Janthinobacterium sp. HH01]
gi|444792379|gb|ELX13926.1| DNA-3-methyladenine glycosylase II [Janthinobacterium sp. HH01]
Length = 219
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 107/207 (51%), Gaps = 20/207 (9%)
Query: 121 PLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFH-----TPFLALTRSILYQQLAF 175
P E ++E L DR + LI P F H PF L RSI+ QQ+
Sbjct: 19 PYWEEAKIE-----LMKRDRIMKKLI-----PQFGDLHLVGHDDPFTTLARSIVGQQVTT 68
Query: 176 KAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSD 235
KA + + + + P ++ +QL G+S RK Y+ DLA ++N +
Sbjct: 69 KAADVAWKKLLLV---SPKCTPAQIIKAGAEQLSACGLSKRKTEYILDLADHFKNKRVHT 125
Query: 236 SAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV-QLLYSLEE 294
S MDD+++ L + GIG W+ MF+IF+L RP+VLP++D G+ +G+ Q +S E
Sbjct: 126 SQWDQMDDEAVIAELVQIRGIGRWTAEMFLIFNLLRPNVLPLDDPGLIQGISQNYFSGEP 185
Query: 295 LPRPSQMDQLCEKWRPYRSVASWYLWR 321
+ R S ++ W P+R+VA+WYLWR
Sbjct: 186 VSR-SDAREVSANWEPWRTVATWYLWR 211
>gi|424778294|ref|ZP_18205244.1| DNA-3-methyladenine glycosylase II [Alcaligenes sp. HPC1271]
gi|422886833|gb|EKU29245.1| DNA-3-methyladenine glycosylase II [Alcaligenes sp. HPC1271]
Length = 284
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 94/166 (56%), Gaps = 4/166 (2%)
Query: 169 LYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKY 228
+YQQL +A I R I + PE VLA LR G+SG KA+ + LA+
Sbjct: 1 MYQQLHTRAAERILQRLIDIYPHGHCPTPEEVLATPYDTLRACGLSGAKANSILGLAQAR 60
Query: 229 QNGILSDSAI-VNMDDKSLFTMLTMVNGIGSWSVHMFMI-FSLHRPDVLPINDLGVRKGV 286
+GI+ D A + M D+ L LT + GIG W+V M M+ ++L D+LP +D GVR+G
Sbjct: 61 LDGIIPDQATALQMPDEELIKRLTTLRGIGRWTVEMMMMMYTLEHEDILPADDFGVREGY 120
Query: 287 QLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAKGAPSSA 332
+ L L++ P + ++ + W PYRSVASWYLWR K AP+ A
Sbjct: 121 RNLKQLDKAPSARVLREIGQAWAPYRSVASWYLWRM--PKQAPALA 164
>gi|402835250|ref|ZP_10883826.1| base excision DNA repair protein, HhH-GPD family [Selenomonas sp.
CM52]
gi|402275712|gb|EJU24850.1| base excision DNA repair protein, HhH-GPD family [Selenomonas sp.
CM52]
Length = 213
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 112/195 (57%), Gaps = 10/195 (5%)
Query: 129 EAAIRHLRNADRQLASLID---IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRF 185
E I +L++ D++LA++I+ + P D F A+ I+ QQ++ KA +++ R
Sbjct: 8 EKEIAYLKSKDKKLAAVIESLGVLERPVHDDV---FSAVVHHIIGQQISTKAQEAVWAR- 63
Query: 186 IALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKS 245
LC + +L+L ++L+ +G S RK Y+ D A K N + +A+ M D
Sbjct: 64 --LCEKVGTMDAAHLLSLGREELQAVGTSFRKVDYIMDFAEKVANRDFNIAALYAMSDDE 121
Query: 246 LFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLC 305
+ L+ + GIG+W+ M +IF+L RPDVL DLG+++G+++LY +E+ R + ++
Sbjct: 122 VICALSSLKGIGAWTAEMLLIFTLRRPDVLSFGDLGIQRGLRMLYRHKEIDR-RRFERYK 180
Query: 306 EKWRPYRSVASWYLW 320
+++ PY S AS YLW
Sbjct: 181 KRYSPYASTASLYLW 195
>gi|399156757|ref|ZP_10756824.1| DNA-3-methyladenine glycosylase II [SAR324 cluster bacterium SCGC
AAA001-C10]
Length = 207
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 104/190 (54%), Gaps = 5/190 (2%)
Query: 135 LRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAG 194
LR AD ++A +I+ P F L+ +I+ QQL+ + I TRF L E
Sbjct: 11 LRLADSRIAGIIERAGPCELIPHEVGFAGLSSAIIGQQLSNQVAKIIRTRFRKLFENE-- 68
Query: 195 VVPE--TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTM 252
+P+ +L L LR+ G+S +K YL LA+ ++G L A+ MDD+ L
Sbjct: 69 -LPDHGYLLKLDYPVLRKTGLSFQKIKYLRGLAQWMKSGDLDFLALEGMDDEIAIQQLVQ 127
Query: 253 VNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYR 312
V GIG W+ M+++FSL+RPDVLP+ D + ++ LY L E + EKWRP+R
Sbjct: 128 VKGIGRWTAEMYLMFSLNRPDVLPLGDAALEVAMKSLYGLPEKDWEKPAITIAEKWRPWR 187
Query: 313 SVASWYLWRF 322
+VA WYL+R+
Sbjct: 188 TVACWYLYRY 197
>gi|406932694|gb|EKD67591.1| hypothetical protein ACD_48C00323G0001 [uncultured bacterium]
Length = 201
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 97/188 (51%), Gaps = 1/188 (0%)
Query: 134 HLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEA 193
H + D L+SLI + FL+L R I+ QQLA A +I+ RF L E
Sbjct: 9 HFNSVDPILSSLIPLSDNIAIQHSENYFLSLCREIITQQLAGGAARAIFGRFEKLFTTET 68
Query: 194 GVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMV 253
V E +L + Q +R G S K Y+ LA+ + I+ + + + D + L V
Sbjct: 69 -VTAEKILLIPDQIIRDTGASWAKVKYIKSLAQCVVSKIIHLNKLNELSDAEVIEELVKV 127
Query: 254 NGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRS 313
GIG W+ MF++FSL R DV DLG+R +Q LY +++ P QM+++ KW PYR+
Sbjct: 128 KGIGPWTAEMFLMFSLGREDVFSFGDLGLRHSLQKLYKMKKEPTVKQMEKITSKWSPYRT 187
Query: 314 VASWYLWR 321
+ LW+
Sbjct: 188 YGALLLWK 195
>gi|449301040|gb|EMC97051.1| hypothetical protein BAUCODRAFT_121565 [Baudoinia compniacensis
UAMH 10762]
Length = 297
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 109/219 (49%), Gaps = 30/219 (13%)
Query: 128 VEAAIRHLRNADRQLASLIDIH-----PPPTFDSFHTPFLALTRSILYQQLAFKAGTSIY 182
++ A+ HL D L +ID H P PF +L I+ QQ++ A SI
Sbjct: 71 LDEAVAHLLAVDSGLGPVIDQHHCHVFSPSGLAESIDPFRSLASGIMAQQVSGAAAKSIK 130
Query: 183 TRFIALCGGEA--------GVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILS 234
+F+AL E+ +V ET + +LR+ G+S RKA Y+ LA K+ NG L+
Sbjct: 131 NKFVALFPPESCPSGFPSPALVAETGIP----RLREAGLSQRKAEYIQGLAAKFTNGELT 186
Query: 235 DSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEE 294
++N D+ + L V G+G WSV MFM F L R DV DLGV++G+ Y +
Sbjct: 187 IPMLMNGSDEEVMEKLVAVRGLGIWSVEMFMCFGLKRMDVFSTGDLGVQRGMA-AYKGRD 245
Query: 295 LPR------------PSQMDQLCEKWRPYRSVASWYLWR 321
+ + +M ++ E +RPYRS+ WY+WR
Sbjct: 246 VAKLKAKGGKWKYMSEKEMLEVAEPFRPYRSLFMWYMWR 284
>gi|393217884|gb|EJD03373.1| DNA glycosylase [Fomitiporia mediterranea MF3/22]
Length = 440
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 97/176 (55%), Gaps = 18/176 (10%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFH--TPFLALTRSILYQQLAFKAGTSIYTRFI 186
E A +HL + D + L F+ PF L SIL QQ+++ A SI RFI
Sbjct: 92 EDAKQHLVSVDPRFEDLFSKLKCRPFEHLERVDPFRTLATSILGQQISWLAARSIVHRFI 151
Query: 187 ALCG-------GEAGVV--PET-------VLALTPQQLRQIGVSGRKASYLHDLARKYQN 230
L ++G P++ V+A LR G+SGRKA Y+ DLA ++ +
Sbjct: 152 RLFDPSLPEKPTDSGSTSNPDSFFPSAHQVVAQDIATLRTAGLSGRKAEYVQDLAARFAD 211
Query: 231 GILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV 286
G LS+ I+ +D+ L+ MLT V GIG W+V MF IFSL RPD++P+ DLGV++GV
Sbjct: 212 GRLSNEKIMQANDEELYEMLTAVRGIGKWTVDMFAIFSLRRPDIMPVGDLGVQRGV 267
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 15/61 (24%)
Query: 272 PDVLPINDLGVR-------KGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
P+ L + DL R KGV L P +M++L E W+PYRS+ +Y+W E
Sbjct: 385 PEGLSVKDLQSRLEGKKQKKGVFLT--------PKEMEELTEPWKPYRSIGVYYMWALSE 436
Query: 325 A 325
Sbjct: 437 G 437
>gi|212638179|ref|YP_002314699.1| 3-methyladenine DNA glycosylase [Anoxybacillus flavithermus WK1]
gi|212559659|gb|ACJ32714.1| 3-methyladenine DNA glycosylase [Anoxybacillus flavithermus WK1]
Length = 305
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 94/169 (55%), Gaps = 5/169 (2%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSG 215
+ L + I++QQL K + RF+ G E + PE + L+ +L+ + SG
Sbjct: 137 YFCLIKCIIHQQLHMKVAYKMTERFVKTFGQEIDGLWFYPRPEQIARLSYDELKALQFSG 196
Query: 216 RKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVL 275
+KA Y+ D +R G L +V+ D+ + L + GIG W+V F++F L RP++
Sbjct: 197 KKAEYMIDTSRLIVEGKLDLERLVDATDEEVMKTLLAIRGIGPWTVQNFLLFGLGRPNLF 256
Query: 276 PINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
P D+G+++ VQ L SLE P +QM+ L ++W PY S AS YLWR +E
Sbjct: 257 PKADIGLQRAVQKLLSLETKPSLAQMEALSKRWEPYLSYASLYLWRSIE 305
>gi|330839590|ref|YP_004414170.1| HhH-GPD family protein [Selenomonas sputigena ATCC 35185]
gi|329747354|gb|AEC00711.1| HhH-GPD family protein [Selenomonas sputigena ATCC 35185]
Length = 212
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 111/195 (56%), Gaps = 10/195 (5%)
Query: 129 EAAIRHLRNADRQLASLID---IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRF 185
E I +L++ D++LA++I+ + P D F A+ I+ QQ++ KA +I+ R
Sbjct: 7 EKEIAYLKSKDKKLAAVIESLGVLERPVHDDV---FSAVVHHIIGQQISTKAQEAIWAR- 62
Query: 186 IALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKS 245
LC V +L+L ++L+ +G S RK Y+ D A K + + +A+ M D
Sbjct: 63 --LCEKVGTVDATHLLSLGREELQAVGTSFRKVDYIMDFAEKVASRDFNIAALYAMSDDE 120
Query: 246 LFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLC 305
+ L+ + GIG W+ M +IF+L RPDVL DLG+++G+++LY +E+ R + ++
Sbjct: 121 VICTLSSLKGIGDWTAEMLLIFTLRRPDVLSFGDLGIQRGLRMLYRHKEIAR-RRFERYK 179
Query: 306 EKWRPYRSVASWYLW 320
+++ PY S AS YLW
Sbjct: 180 KRYSPYASTASLYLW 194
>gi|119188129|ref|XP_001244671.1| hypothetical protein CIMG_04112 [Coccidioides immitis RS]
Length = 437
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 113/272 (41%), Gaps = 67/272 (24%)
Query: 118 IARPLSSEGEV-EAAIRHLRNADRQLASLIDIHPPPTFDSFH-----TPFLALTRSILYQ 171
I RP ++ G + E + HL D +L S+I+ +P P F PF AL I+ Q
Sbjct: 156 IPRPTATTGNILEQGLAHLLKVDPKLRSVIEKYPSPPFSPSDLAEEIDPFQALASGIIGQ 215
Query: 172 QLAFKAGTSIYTRFIAL------------------------------------------- 188
Q++ A SI +F+AL
Sbjct: 216 QVSGAAAKSIKKKFVALFHKGLAVAGTTGALADATEVKSENAKQANDYDYGTNTEKSINE 275
Query: 189 --CGGEAGVV----PETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMD 242
C E G V PE V+ LR G+S RKA Y+ LA K+ NG LS ++
Sbjct: 276 NDCKNEDGAVRFPTPEEVMKCDLATLRTAGLSQRKAEYIQGLAEKFVNGELSARMLLTAS 335
Query: 243 DKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLE--------- 293
D+ + L V G+G WSV MF +F L R DV DLGV++G+ +
Sbjct: 336 DEDVLEKLIAVRGLGKWSVEMFSVFGLKRMDVFSTGDLGVQRGMAAFVGRDIAKLKAKGG 395
Query: 294 ---ELPRPSQMDQLCEKWRPYRSVASWYLWRF 322
+ +M ++ + PYRS+ WY+WR+
Sbjct: 396 GKFKYMAEKEMLEIAAPFAPYRSLFMWYMWRW 427
>gi|453080250|gb|EMF08301.1| DNA glycosylase [Mycosphaerella populorum SO2202]
Length = 388
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 110/233 (47%), Gaps = 30/233 (12%)
Query: 115 PRIIARPLSSEGEVEAAIRHLRNADRQLAS----LIDIH-----PPPTFDSFHTPFLALT 165
PR ++ L E A HL D L +ID H P PF +L
Sbjct: 147 PRTTSKTLLDE-----ACAHLLQIDSTLTGKLQPVIDQHYCRVFSPEGLAENIDPFRSLA 201
Query: 166 RSILYQQLAFKAGTSIYTRFIALCGGEA---GVVPETVLALTPQQ-LRQIGVSGRKASYL 221
I+ QQ++ A +SI +FIAL EA G P ++A T LR G+S RKA Y+
Sbjct: 202 SGIMAQQVSGAAASSIKNKFIALFPPEACPTGFPPPNLVAATDLAILRTAGLSQRKAEYI 261
Query: 222 HDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLG 281
LA+K+ G ++ ++ D+ + L V G+G+WSV MFM F L R DV DLG
Sbjct: 262 QGLAQKFDTGEITTKQLMTGSDEDVMRDLVAVRGLGAWSVEMFMCFGLKRLDVFSTGDLG 321
Query: 282 VRKGVQLLYSLE------------ELPRPSQMDQLCEKWRPYRSVASWYLWRF 322
V++G+ + + +M L EK+RPYRS+ WY+WR
Sbjct: 322 VQRGMAAYMGRDVSKLKAKGGGKWKYMSEKEMVDLAEKFRPYRSLFMWYMWRI 374
>gi|392871388|gb|EAS33296.2| DNA-3-methyladenine glycosylase [Coccidioides immitis RS]
Length = 455
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 113/272 (41%), Gaps = 67/272 (24%)
Query: 118 IARPLSSEGEV-EAAIRHLRNADRQLASLIDIHPPPTFDSFH-----TPFLALTRSILYQ 171
I RP ++ G + E + HL D +L S+I+ +P P F PF AL I+ Q
Sbjct: 174 IPRPTATTGNILEQGLAHLLKVDPKLRSVIEKYPSPPFSPSDLAEEIDPFQALASGIIGQ 233
Query: 172 QLAFKAGTSIYTRFIAL------------------------------------------- 188
Q++ A SI +F+AL
Sbjct: 234 QVSGAAAKSIKKKFVALFHKGLAVAGTTGALADATEVKSENAKQANDYDYGTNTEKSINE 293
Query: 189 --CGGEAGVV----PETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMD 242
C E G V PE V+ LR G+S RKA Y+ LA K+ NG LS ++
Sbjct: 294 NDCKNEDGAVRFPTPEEVMKCDLATLRTAGLSQRKAEYIQGLAEKFVNGELSARMLLTAS 353
Query: 243 DKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLE--------- 293
D+ + L V G+G WSV MF +F L R DV DLGV++G+ +
Sbjct: 354 DEDVLEKLIAVRGLGKWSVEMFSVFGLKRMDVFSTGDLGVQRGMAAFVGRDIAKLKAKGG 413
Query: 294 ---ELPRPSQMDQLCEKWRPYRSVASWYLWRF 322
+ +M ++ + PYRS+ WY+WR+
Sbjct: 414 GKFKYMAEKEMLEIAAPFAPYRSLFMWYMWRW 445
>gi|260886577|ref|ZP_05897840.1| putative DNA-3-methyladenine glycosidase II [Selenomonas sputigena
ATCC 35185]
gi|260863720|gb|EEX78220.1| putative DNA-3-methyladenine glycosidase II [Selenomonas sputigena
ATCC 35185]
Length = 213
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 111/195 (56%), Gaps = 10/195 (5%)
Query: 129 EAAIRHLRNADRQLASLID---IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRF 185
E I +L++ D++LA++I+ + P D F A+ I+ QQ++ KA +I+ R
Sbjct: 8 EKEIAYLKSKDKKLAAVIESLGVLERPVHDDV---FSAVVHHIIGQQISTKAQEAIWAR- 63
Query: 186 IALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKS 245
LC V +L+L ++L+ +G S RK Y+ D A K + + +A+ M D
Sbjct: 64 --LCEKVGTVDATHLLSLGREELQAVGTSFRKVDYIMDFAEKVASRDFNIAALYAMSDDE 121
Query: 246 LFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLC 305
+ L+ + GIG W+ M +IF+L RPDVL DLG+++G+++LY +E+ R + ++
Sbjct: 122 VICTLSSLKGIGDWTAEMLLIFTLRRPDVLSFGDLGIQRGLRMLYRHKEIAR-RRFERYK 180
Query: 306 EKWRPYRSVASWYLW 320
+++ PY S AS YLW
Sbjct: 181 KRYSPYASTASLYLW 195
>gi|320449265|ref|YP_004201361.1| DNA-3-methyladenine glycosidase [Thermus scotoductus SA-01]
gi|320149434|gb|ADW20812.1| DNA-3-methyladenine glycosidase [Thermus scotoductus SA-01]
Length = 183
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 94/162 (58%), Gaps = 10/162 (6%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
PF L SI+ QQL+ KA +I R + PE +L ++P LRQ G+S KA
Sbjct: 29 PFKVLAESIVAQQLSGKAAAAISARLWSRVEPH----PEALLQVSPAILRQAGLSHAKAQ 84
Query: 220 YLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIND 279
L DLA + G+L + +++D+++ L V GIG W+V MF++F L RPDV P+ D
Sbjct: 85 ALRDLAARSLEGLLD--GLDSLEDEAVKERLLQVRGIGPWTVDMFLMFGLRRPDVWPVGD 142
Query: 280 LGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
LG+R+ + L+ +E L P+ E +RPYRS +WYLWR
Sbjct: 143 LGLRRAAKALFDVEALGLPA----FGEPFRPYRSHLAWYLWR 180
>gi|422665673|ref|ZP_16725544.1| DNA-3-methyladenine glycosylase II, partial [Pseudomonas syringae
pv. aptata str. DSM 50252]
gi|330976090|gb|EGH76156.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 221
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 116/210 (55%), Gaps = 14/210 (6%)
Query: 123 SSEGEVEAAIRHLRNADRQLASLIDIHPPPTF---DSFHTPFLALTRSILYQQLAFKAGT 179
S++ E A+ LR+ D Q SLID H P + PF AL +++ YQQL +AG
Sbjct: 2 SADREHAEAVAALRSIDVQWQSLID-HVGPCLHPVSAAQDPFQALVKAVAYQQLHARAGD 60
Query: 180 SIYTRFIALCGGEAGVVPET-------VLALTPQQLRQIGVSGRKASYLHDLARKYQNGI 232
++ R AL ++ +PE ++ L Q LR G S K + +A +G+
Sbjct: 61 AMVRRLRALFLDDS--LPEVSFPGAQALVDLDDQALRSCGFSASKCRAIKAIAEARLDGL 118
Query: 233 LSD-SAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYS 291
+ + SA + M +++L L + G G W+V M +I+ L + DV+P +D GV +G + LY+
Sbjct: 119 VPEVSAALAMGNEALVERLIQLPGGGRWTVEMMLIYGLGQLDVMPASDFGVCEGYRRLYA 178
Query: 292 LEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
L+ P QM +L E++ PYR++A+WYLWR
Sbjct: 179 LQLKPSHRQMARLAERFAPYRTIAAWYLWR 208
>gi|115398273|ref|XP_001214728.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192919|gb|EAU34619.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 395
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 96/178 (53%), Gaps = 11/178 (6%)
Query: 120 RPLSSEGEV-EAAIRHLRNADRQLASLIDIHPPPTFDSFH-----TPFLALTRSILYQQL 173
RP ++ G + E A+ HL D +L +I +P P F PF +L SI+ QQ+
Sbjct: 143 RPTATTGTLLEKAVAHLIATDPRLEPVIKQYPCPLFSPEGLAEEIDPFRSLVSSIIGQQV 202
Query: 174 AFKAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSGRKASYLHDLARKY 228
+ A SI +F+AL G G V PE ++ LR G+S RKA Y+H L++K+
Sbjct: 203 SGAAAKSIKDKFVALFNGPDGGVAWFPTPEQIVQCDIATLRTAGLSQRKAEYIHGLSQKF 262
Query: 229 QNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV 286
+G LS ++N D+ L LT V G+G WSV MF F+L R DV DLGV++G
Sbjct: 263 ASGELSARMLLNASDEELLETLTAVRGLGRWSVEMFACFALKRIDVFSTGDLGVQRGC 320
>gi|398832798|ref|ZP_10590949.1| HhH-GPD superfamily base excision DNA repair protein
[Herbaspirillum sp. YR522]
gi|398222692|gb|EJN09060.1| HhH-GPD superfamily base excision DNA repair protein
[Herbaspirillum sp. YR522]
Length = 219
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 103/200 (51%), Gaps = 11/200 (5%)
Query: 126 GEVEAAIRHLRNADRQLASLI----DIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSI 181
G E A L DR + LI D+ D+F T L RS++ QQ++ KA ++
Sbjct: 18 GYWEEAKAELMKRDRIMRKLIPQFGDLQLTVRGDAFTT----LARSVIGQQISTKAANAV 73
Query: 182 YTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNM 241
+ RF+ C P V+ + + L G+S RKA Y+ DLA ++ + M
Sbjct: 74 WQRFLEAC---PRCQPGQVIRVGLEGLGDCGLSKRKAEYILDLANHFKAKTVHPDKWAEM 130
Query: 242 DDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQM 301
D+ + + + GIG W+ MF+IF+L RP+VLP++D G+ KG+ Y E S
Sbjct: 131 ADEDVIAEMIQIRGIGRWTAEMFLIFNLLRPNVLPLDDPGLLKGISDSYFSGEPVSRSDA 190
Query: 302 DQLCEKWRPYRSVASWYLWR 321
++ W P+R+VA+WYLWR
Sbjct: 191 REVAANWEPWRTVATWYLWR 210
>gi|296827142|ref|XP_002851122.1| DNA-3-methyladenine glycosylase [Arthroderma otae CBS 113480]
gi|238838676|gb|EEQ28338.1| DNA-3-methyladenine glycosylase [Arthroderma otae CBS 113480]
Length = 411
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 115/248 (46%), Gaps = 45/248 (18%)
Query: 120 RPLSSEGEV-EAAIRHLRNADRQLASLIDIHPPPTFDSFH-----TPFLALTRSILYQQL 173
RP ++ G + AI HL D +L ++ID P F PF AL I+ QQ+
Sbjct: 154 RPTTTVGNLLTDAIDHLLTVDGKLKTVIDKFPDAPFRPADLAVEIDPFQALVSGIIGQQV 213
Query: 174 AFKAGTSIYTRFIALC--------------GG-----EAGVVPETVLALTPQQ------- 207
+ A SI +FIAL GG +AG+ + V +PQQ
Sbjct: 214 SGAAAKSIKKKFIALFNPDSADESSKTKEDGGQGDHDDAGMRYKPVAFPSPQQVVACDLP 273
Query: 208 -LRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMI 266
LR G+S RKA Y+H LA K+ +G LS ++ D+ + L V G+G WSV MF++
Sbjct: 274 TLRTAGLSQRKAEYIHGLAEKFASGELSARMLLTASDEEVLEKLITVRGLGKWSVEMFLL 333
Query: 267 FSLHRPDVLPINDLGVRKGVQLLYSLE------------ELPRPSQMDQLCEKWRPYRSV 314
F L R DV DLGV++G+ + + M ++ + PYRS+
Sbjct: 334 FGLKRMDVFSTGDLGVQRGMAAYVGRDVSKLKAKGGGKFKYMSEKDMIEIAAPFSPYRSL 393
Query: 315 ASWYLWRF 322
WY+WR+
Sbjct: 394 FMWYMWRW 401
>gi|425781643|gb|EKV19595.1| DNA-3-methyladenine glycosylase, putative [Penicillium digitatum
PHI26]
gi|425782870|gb|EKV20751.1| DNA-3-methyladenine glycosylase, putative [Penicillium digitatum
Pd1]
Length = 374
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/228 (33%), Positives = 108/228 (47%), Gaps = 38/228 (16%)
Query: 128 VEAAIRHLRNADRQLASLIDIHPPPTFDSFH-----TPFLALTRSILYQQLAFKAGTSIY 182
+E A HL D ++A++I+ HP P F PF +LT SI+ QQ++ A SI
Sbjct: 142 LEKATAHLIATDPRIATVIEQHPCPLFSPAGLAEEIDPFNSLTSSIIGQQVSGAAAKSIR 201
Query: 183 TRFIALCGGEAGVVPET---VLALTPQQ--------LRQIGVSGRKASYLHDLARKYQNG 231
+F+AL V P+ TP Q LR G+S RKA Y+ LA+K+ +G
Sbjct: 202 NKFLALFDLPDTVAPDGHRHAKFPTPDQVAKCDIPTLRTAGLSQRKAEYIQGLAQKFASG 261
Query: 232 ILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLL-- 289
L + D+ LF L V G+G WSV MF +F+L R DV DLGV++G
Sbjct: 262 ELGARMLALATDEELFEKLIAVRGLGRWSVEMFALFALKRIDVFSTGDLGVQRGCAAFMG 321
Query: 290 ---------------YSLEELPRPSQMDQLCEKWRPYRSVASWYLWRF 322
Y E+ + +L K+ PYRS+ WY+WR
Sbjct: 322 RDVSKLKGKGGGKFKYMAEK-----DLLELAAKFAPYRSLFMWYMWRI 364
>gi|403418761|emb|CCM05461.1| predicted protein [Fibroporia radiculosa]
Length = 459
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 92/173 (53%), Gaps = 15/173 (8%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFH--TPFLALTRSILYQQLAFKAGTSIYTRFI 186
E A HL +AD + + P F+ PF L SI+ QQ+++ A +I +FI
Sbjct: 95 EDAKEHLISADCRFEEMFKRMPCKPFEHLEQFDPFRTLANSIMGQQISWLAARAIIHKFI 154
Query: 187 ALCGG---EAGVVPETVLALTPQQ----------LRQIGVSGRKASYLHDLARKYQNGIL 233
L E V V P LR G+SGRKA Y+HDLA ++ +G L
Sbjct: 155 RLFDPSLPEKPVDHSNVSTFFPTAHQVSEMDLSILRTAGLSGRKAEYIHDLASRFSDGRL 214
Query: 234 SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV 286
S ++ +D+ L+ ML V GIG W+V MF +FSL RPD+LP+ DLGV++GV
Sbjct: 215 STQKLLEANDEDLYDMLIEVKGIGRWTVDMFALFSLRRPDILPVGDLGVQRGV 267
>gi|186685302|ref|YP_001868498.1| HhH-GPD family protein [Nostoc punctiforme PCC 73102]
gi|186467754|gb|ACC83555.1| HhH-GPD family protein [Nostoc punctiforme PCC 73102]
Length = 212
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 103/199 (51%), Gaps = 3/199 (1%)
Query: 124 SEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYT 183
+E + + L N D LA +++ PP S F L IL QQ++ A +++
Sbjct: 11 TEESLTRGLMVLANIDSDLARILETLGPPPIWSREPGFATLLCIILEQQVSVAAARAVFN 70
Query: 184 RFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDD 243
R LCG + PE L L QLR IG S +K Y LA + L S + MD+
Sbjct: 71 R---LCGVIVPLTPENFLTLDDVQLRGIGFSRQKILYSRGLANAIASDQLDLSKLERMDE 127
Query: 244 KSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQ 303
++ T L + GIG W+V ++++ +L RPDV P DL + +Q L +L P P Q++
Sbjct: 128 TTIRTELKRLKGIGDWTVDIYLLMALQRPDVFPKGDLAIAIALQKLKNLATRPTPVQLEG 187
Query: 304 LCEKWRPYRSVASWYLWRF 322
+ + WRP+R+VA+ LW +
Sbjct: 188 MTQHWRPWRAVAARLLWHY 206
>gi|378729266|gb|EHY55725.1| DNA-3-methyladenine glycosylase II [Exophiala dermatitidis
NIH/UT8656]
Length = 397
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 105/216 (48%), Gaps = 22/216 (10%)
Query: 128 VEAAIRHLRNADRQLASLIDIHPPPTFDSFH-----TPFLALTRSILYQQLAFKAGTSIY 182
+E A HL + D + +LI+ HP F + PF +L SI+ QQ++ A SI
Sbjct: 169 LEEACNHLISVDPRFKTLIEKHPCHLFSAKGLAEQIDPFRSLASSIMGQQVSGAAAKSIR 228
Query: 183 TRFIALCGGEAGV-----VPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSA 237
+FIAL E P V A +LR G+S RKA Y+ LA+K+ G L+
Sbjct: 229 NKFIALFNEEGTDQARFPTPAQVAATDIARLRLAGLSQRKAEYIQGLAQKFATGELTADL 288
Query: 238 IVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPR 297
++ D+ + L V G+G WSV MF F L R D+L DLGV++G+ + +
Sbjct: 289 LMRATDEEVMEKLIAVRGLGKWSVEMFACFGLKRLDILSTGDLGVQRGMAAFFGKDVKKL 348
Query: 298 P----------SQMDQLCEK--WRPYRSVASWYLWR 321
S+ D L + + PYRS+ WY+WR
Sbjct: 349 KAKGGGKWKYMSEQDMLDKSAPFAPYRSLFMWYMWR 384
>gi|76802719|ref|YP_330814.1| DNA N-glycosylase / DNA lyase [Natronomonas pharaonis DSM 2160]
gi|76558584|emb|CAI50176.1| DNA N-glycosylase [Natronomonas pharaonis DSM 2160]
Length = 203
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 102/188 (54%), Gaps = 6/188 (3%)
Query: 137 NADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV 196
AD L LI+ H T + F L S+L QQ++ + + R
Sbjct: 9 RADPVLEPLIERHGALTIEPADDLFRRLLVSVLRQQVSMASAEATKKRLFDAVEP----T 64
Query: 197 PETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGI 256
P VLA + R+ G+S +KA+YLH++A +++ + MDD+++ LT + G+
Sbjct: 65 PTAVLAADTETFREAGLSRQKATYLHNIAAAFEDHGYDRAYFEPMDDEAVRAELTDITGV 124
Query: 257 GSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVAS 316
G W+ +M ++FSL R DV P+ DLG+RKG++ L E+L R + M + E+W PYRS AS
Sbjct: 125 GEWTANMQLLFSLGREDVFPVGDLGIRKGMRALLD-EDLDRAA-MTEAAERWAPYRSYAS 182
Query: 317 WYLWRFVE 324
YLWR E
Sbjct: 183 LYLWRVNE 190
>gi|387927652|ref|ZP_10130331.1| YfjP [Bacillus methanolicus PB1]
gi|387589796|gb|EIJ82116.1| YfjP [Bacillus methanolicus PB1]
Length = 286
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 111/216 (51%), Gaps = 20/216 (9%)
Query: 129 EAAIRHLRNADRQLASLIDIHP-------PPTFDSFH--------TPFLALTRSILYQQL 173
E AI+ L + + L++IH FD + P+ L + I++QQL
Sbjct: 71 EKAIKRLTHIFQWNIPLVNIHAHFQNTALKKIFDEHYGTPLVLDFNPYNCLLKCIIHQQL 130
Query: 174 AFKAGTSIYTRFIALCGG-EAGV----VPETVLALTPQQLRQIGVSGRKASYLHDLARKY 228
++ RF+ G E GV +PE + +LT +QLR++ SGRKA Y+ +A++
Sbjct: 131 NLAFAHTLTERFVKTFGFQEKGVWFYPLPEKLASLTVEQLRELQFSGRKAEYVIGIAKET 190
Query: 229 QNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQL 288
L + D+ + L + G+G W+V F+IF L RP++ P D+G++ ++
Sbjct: 191 AKRRLRFDELEKKSDEEIMEKLIKLRGVGPWTVQNFLIFGLGRPNLFPTADIGIQNALKK 250
Query: 289 LYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
LY+LE P +M++ + W PY S AS YLWR +E
Sbjct: 251 LYNLERKPTLEEMNEYKKNWAPYLSYASLYLWRSIE 286
>gi|393235153|gb|EJD42710.1| DNA glycosylase [Auricularia delicata TFB-10046 SS5]
Length = 440
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/257 (35%), Positives = 125/257 (48%), Gaps = 40/257 (15%)
Query: 61 PSKIPLRPRKIRKLSPDNGVDQASSSQPTESSKATSAKSTKSRAIQQQQQ---------T 111
P P PRK R + D+ + AS S ES+ AT + +S A ++ T
Sbjct: 36 PLSAPRTPRK-RARAVDDSIGDASVS---ESAPATPKRKPRSTAATPRKTPSANVGEPVT 91
Query: 112 LTVPR-----IIARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHT--PFLAL 164
+TVPR ++ L+ + +V A HL AD + A L + F +T PF L
Sbjct: 92 ITVPRGAEPELVPAQLTFDLDVAQA--HLIKADPRFAELFERRACKPFVHLNTVDPFRTL 149
Query: 165 TRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETV--------------LALTP-QQLR 209
+ SIL QQ++ A SI RF C +PE +A TP LR
Sbjct: 150 STSILSQQISTLAARSIGHRF---CRMYDPSLPEKYENGQTWDLFPTAQQVAATPLPALR 206
Query: 210 QIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSL 269
G+S RKA YLHDLA + +G ++ + D L ML V GIG W+VHMF +FSL
Sbjct: 207 SAGLSARKAEYLHDLAAHFADGRITTHKLREATDTELSEMLIAVRGIGPWTVHMFALFSL 266
Query: 270 HRPDVLPINDLGVRKGV 286
PD+LP+ DLGV+KG+
Sbjct: 267 RHPDILPVGDLGVQKGL 283
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 20/27 (74%)
Query: 298 PSQMDQLCEKWRPYRSVASWYLWRFVE 324
P++M+ L E W+PYRS+ WY+W ++
Sbjct: 412 PAEMEHLTEAWKPYRSLGVWYMWALLD 438
>gi|404486407|ref|ZP_11021598.1| hypothetical protein HMPREF9448_02034 [Barnesiella intestinihominis
YIT 11860]
gi|404336920|gb|EJZ63378.1| hypothetical protein HMPREF9448_02034 [Barnesiella intestinihominis
YIT 11860]
Length = 217
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 117/215 (54%), Gaps = 25/215 (11%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
E + +L+ D++L+ +ID F AL SI+ QQ++ KA +I+ R +
Sbjct: 9 EKELSYLKQRDKRLSEIIDKVGWVKRRVIPNLFAALVHSIVGQQISTKAHETIWQRIQSS 68
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
G + P+ V++LT ++L++ G+S +K +Y+ A K NG + + D+ +
Sbjct: 69 LGE---ITPQRVISLTDEELQRFGISFKKVTYIKRAATKILNGEFDIHGLYDKTDEEVIE 125
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
L+ ++GIG+WS M M+FS+ RPD+L +DL +++G++++Y ++ R +L EK+
Sbjct: 126 CLSKLDGIGTWSAEMLMLFSMQRPDILSYSDLAIQRGLRMVYHHRDITR-----KLFEKY 180
Query: 309 R----PYRSVASWYLWRFVEAKGAPSSAAAVAAGA 339
R PY SVAS YLW AVA GA
Sbjct: 181 RRRYSPYSSVASLYLW-------------AVAGGA 202
>gi|425737134|ref|ZP_18855408.1| DNA-3-methyladenine glycosidase [Staphylococcus massiliensis S46]
gi|425482855|gb|EKU50009.1| DNA-3-methyladenine glycosidase [Staphylococcus massiliensis S46]
Length = 224
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 106/192 (55%), Gaps = 2/192 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
EA ++ L D L LI D F +L RSI+ QQ++F A ++++R + L
Sbjct: 13 EAPVQALIEKDATLKKLITHLGDIEIDIRPYYFKSLVRSIVGQQISFPAAEAVFSRVVEL 72
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
G + V + V L+ + L +G+S K Y DL R Q+G L + ++DD+++
Sbjct: 73 TGHDFTV--DKVAQLSDEALLDVGLSRAKVKYTRDLIRCIQSGELDLERLDSLDDQTVLK 130
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT V GIG W+ M++IF+L RP++L ++D+ +++ V+ LY ++ R + + W
Sbjct: 131 QLTQVKGIGKWTAEMYLIFTLRRPNILAVDDVALQRVVEWLYQVDRDSRKRVLKEKKALW 190
Query: 309 RPYRSVASWYLW 320
PY S AS+YLW
Sbjct: 191 SPYLSYASFYLW 202
>gi|432331969|ref|YP_007250112.1| HhH-GPD superfamily base excision DNA repair protein [Methanoregula
formicicum SMSP]
gi|432138678|gb|AGB03605.1| HhH-GPD superfamily base excision DNA repair protein [Methanoregula
formicicum SMSP]
Length = 200
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 102/189 (53%), Gaps = 4/189 (2%)
Query: 132 IRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGG 191
I HL+ D++L + ID D F AL + QQ++ KA +++ R G
Sbjct: 11 IAHLKKRDKKLGAAIDEIGMIERDVTPDLFTALVVGVASQQISAKAAETVWRRMEEKLGT 70
Query: 192 EAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLT 251
+ P ++ TP++++Q G+S RKA Y+ + NG L + + ++ D + L+
Sbjct: 71 ---ITPSSIAGATPEEIQQCGMSMRKAGYIKGIGDAVTNGSLDLAGLRDLSDDDVIARLS 127
Query: 252 MVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPY 311
+NG+G W+ M +IFS+ RPDVL DL +R+G+ LY + R + ++ +++ PY
Sbjct: 128 ALNGVGVWTAEMLLIFSMERPDVLSWGDLAIRRGMMHLYGKSTIDRAA-FERYRKRYSPY 186
Query: 312 RSVASWYLW 320
SVAS YLW
Sbjct: 187 GSVASLYLW 195
>gi|226293001|gb|EEH48421.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 426
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 108/256 (42%), Gaps = 53/256 (20%)
Query: 120 RPLSSEGEV-EAAIRHLRNADRQLASLIDIHPPPTFDSFH-----TPFLALTRSILYQQL 173
RP ++ G V E A+ HL QL +ID HP P F PF AL I+ QQ+
Sbjct: 162 RPTTTTGTVLEEAVAHLITVAPQLKPVIDKHPCPLFSPAGLAEEIDPFNALVSGIIGQQV 221
Query: 174 AFKAGTSIYTRFIAL-----CGG------------EAGV------------------VPE 198
+ A SI RF+ L C G E GV P
Sbjct: 222 SGAAAKSIKRRFLGLFGCLDCNGNAEASNNGVNATEKGVGEEKERAEMRYDRDDHFPTPA 281
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V A LR G+S RKA Y+ LA K+ +G LS ++ D+ + L V G+G
Sbjct: 282 QVAACGVATLRTAGLSQRKAEYIQGLAEKFASGELSAHMLLQASDEEVLEKLIAVRGLGR 341
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLE------------ELPRPSQMDQLCE 306
WSV MF F L R DV DLGV++G+ + + +M ++
Sbjct: 342 WSVEMFECFGLKRMDVFSTGDLGVQRGMATFVGRDVSKLKTKGSGKFKYMSEKEMLEIAA 401
Query: 307 KWRPYRSVASWYLWRF 322
+ PYRS+ WY+WR
Sbjct: 402 PFSPYRSLLMWYMWRI 417
>gi|422641462|ref|ZP_16704885.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae Cit 7]
gi|330953849|gb|EGH54109.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae Cit 7]
Length = 221
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 111/197 (56%), Gaps = 9/197 (4%)
Query: 131 AIRHLRNADRQLASLI-----DIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRF 185
A+ LR+ D Q SLI +HP + PF AL +++ YQQL +AG ++ R
Sbjct: 15 AVAALRSIDPQWQSLIYQVGPCLHP---VSAAQDPFQALVKAVAYQQLHARAGDAMVMRL 71
Query: 186 IALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSD-SAIVNMDDK 244
AL ++ + ++ L Q LR G S K + +A +G++ + SA + M ++
Sbjct: 72 RALFVDDSFPGAQALVELDDQALRSCGFSASKCRAIKAIAAARVDGLVPEVSAALAMGNE 131
Query: 245 SLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQL 304
+L L + G+G W+V M +I+ L + DV+P +D GV +G + LY+LE P QM +L
Sbjct: 132 ALVERLIQLPGVGRWTVEMMLIYGLGQLDVMPASDFGVCEGYRRLYALELKPSHRQMARL 191
Query: 305 CEKWRPYRSVASWYLWR 321
E++ PYR++A+WYLWR
Sbjct: 192 AERFAPYRTIAAWYLWR 208
>gi|358387904|gb|EHK25498.1| hypothetical protein TRIVIDRAFT_229636 [Trichoderma virens Gv29-8]
Length = 410
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 108/230 (46%), Gaps = 33/230 (14%)
Query: 128 VEAAIRHLRNADRQLASLIDIH-----PPPTFDSFHTPFLALTRSILYQQLAFKAGTSIY 182
++ A HL D ++ LI+ H P PF +L SI+ QQ++ A SI
Sbjct: 173 LQEACDHLIKVDERMRPLIEKHHCRSFSPEGLAEKIDPFESLVSSIISQQVSGAAAKSIQ 232
Query: 183 TRFIALCGGEAGV-----------------VPETVLALTPQQLRQIGVSGRKASYLHDLA 225
+FIAL E G +P V A + ++LR G+S RKA Y+ LA
Sbjct: 233 NKFIALFSPEGGDAPSQPADGDSSSEKRFPIPSEVAACSIERLRTAGLSQRKAEYVQGLA 292
Query: 226 RKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKG 285
K+ +G ++ + + + L L V G+G WSV MF F+L R DV + DLGV++G
Sbjct: 293 EKFASGEITAQMLHDAPYEELMEKLIAVRGLGKWSVEMFACFALKRMDVFSLGDLGVQRG 352
Query: 286 VQLLYSLEELPRPSQ-----------MDQLCEKWRPYRSVASWYLWRFVE 324
+ + S+ M +L +K+ PYRS+ WY+W+ E
Sbjct: 353 MAAFVGRDVAKLKSKGGKWKYMSEQDMVELSDKFTPYRSLFMWYMWKVEE 402
>gi|398815899|ref|ZP_10574559.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Brevibacillus sp. BC25]
gi|398033625|gb|EJL26919.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Brevibacillus sp. BC25]
Length = 309
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 121/242 (50%), Gaps = 22/242 (9%)
Query: 101 KSRAIQQQQQTLTVPRIIARPLSSEGEVEAAIRHLRNADRQLASLID----IHPPPTFDS 156
+++AI + + ++I R S++ ++ +R +++LA L + + P D
Sbjct: 67 ETQAILSTTEQQLLEKMIRRTFSADLDLSVIYEQMRE-EKELAILTERFRGLRPMLDTDL 125
Query: 157 FHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG-------GEAGV---VPETVLALTPQ 206
F + ++I+ QQ+ ++ R + L G GE + P+ V LT +
Sbjct: 126 FQ----CMVKTIIGQQINLTFAANLTERLVTLAGDPVENPNGEGIIAFPTPDAVARLTVE 181
Query: 207 QLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMI 266
LR + S RKA Y+ D AR N + + M D+ + T LT + GIG W+V ++
Sbjct: 182 DLRTLQFSQRKAEYIIDFARAIVNETVDLERLWTMKDEEIITYLTSLRGIGRWTVECLLM 241
Query: 267 FSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAK 326
F + RPD+LP D+G+R G+ LY L P + + +L EKW P+RS+ Y+W EA
Sbjct: 242 FGMGRPDLLPAADIGLRNGMVHLYGLNSKPNENDIRKLGEKWAPWRSIYCLYVW---EAV 298
Query: 327 GA 328
GA
Sbjct: 299 GA 300
>gi|15614312|ref|NP_242615.1| DNA-3-methyladenine glycosidase [Bacillus halodurans C-125]
gi|10174367|dbj|BAB05468.1| DNA-3-methyladenine glycosidase [Bacillus halodurans C-125]
Length = 221
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 98/183 (53%), Gaps = 1/183 (0%)
Query: 139 DRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPE 198
D +L I+I + PF +L SI+ QQL+ KA ++IY R L GG A PE
Sbjct: 18 DSRLFQFIEIAGEVQLPTKPNPFQSLVSSIVEQQLSIKAASAIYGRVEQLVGG-ALEKPE 76
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
+ ++ + LRQ GVS RK Y+ + ++G L + + + ++ LT + GIG
Sbjct: 77 QLYRVSDEALRQAGVSKRKIEYIRHVCEHVESGRLDFTELEGAEATTVIEKLTAIKGIGQ 136
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+ MFM+FSL R DVL + D+G+++G + LY E + + W PY +VA Y
Sbjct: 137 WTAEMFMMFSLGRLDVLSVGDVGLQRGAKWLYGNGEGDGKKLLIYHGKAWAPYETVACLY 196
Query: 319 LWR 321
LW+
Sbjct: 197 LWK 199
>gi|422674393|ref|ZP_16733747.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae pv. aceris
str. M302273]
gi|330972121|gb|EGH72187.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae pv. aceris
str. M302273]
Length = 221
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 115/205 (56%), Gaps = 9/205 (4%)
Query: 123 SSEGEVEAAIRHLRNADRQLASLID-----IHPPPTFDSFHTPFLALTRSILYQQLAFKA 177
S++ E A+ LR++D Q SLID +HP + PF AL +++ YQQL +A
Sbjct: 7 STDREHAEAVAALRSSDPQWQSLIDQVGPCLHP---VSAAQDPFQALVKAVAYQQLHARA 63
Query: 178 GTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSD-S 236
G ++ R +L + ++ L Q LR G S K + +A +G++ + S
Sbjct: 64 GDAMVMRLRSLFPEVSFPSAPALVELDDQALRSCGFSASKCRAIKAIAAARLDGLVPEVS 123
Query: 237 AIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELP 296
A + M +++L L + G+G W+V M +I+ L + DV+P +D GV +G + LY+L+ P
Sbjct: 124 AALAMGNEALVERLIQLPGVGRWTVEMMLIYGLGQLDVMPASDFGVCEGYRRLYALQLKP 183
Query: 297 RPSQMDQLCEKWRPYRSVASWYLWR 321
QM +L E++ PYR++A+WYLWR
Sbjct: 184 SHRQMARLAERFAPYRTIAAWYLWR 208
>gi|291523228|emb|CBK81521.1| DNA-3-methyladenine glycosylase II [Coprococcus catus GD/7]
Length = 214
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 112/219 (51%), Gaps = 26/219 (11%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
E I +LRN D++L+ +ID + F A+ I+ QQ++ KA +I+ R
Sbjct: 7 ENEITYLRNKDKKLSEVIDQIGMIEREVDTDLFSAVVHHIIGQQISTKAQATIWQRMKET 66
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
G V T+L+ +L+ +G++ RKA Y+ D ARK G+ A+ M D++
Sbjct: 67 LGAVNAV---TILSADISKLQSLGMTFRKAEYITDFARKVHEGVFDLEAVAQMSDEAAIK 123
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
L + GIG W+ M ++F L RPD+ +DL +++G++++Y ++ R +L EK+
Sbjct: 124 ELASLKGIGVWTAEMILLFCLQRPDIFSYDDLAIQRGLRMVYHHRKIDR-----KLFEKY 178
Query: 309 R----PYRSVASWYLWRFVEAKGAPSSAAAVAAGAALPQ 343
R PY SVAS YLW AG A+P+
Sbjct: 179 RRRFSPYCSVASLYLW--------------AVAGGAIPE 203
>gi|264677339|ref|YP_003277245.1| hypothetical protein CtCNB1_1203 [Comamonas testosteroni CNB-2]
gi|262207851|gb|ACY31949.1| HhH-GPD [Comamonas testosteroni CNB-2]
Length = 274
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 109/203 (53%), Gaps = 15/203 (7%)
Query: 131 AIRHLRNADRQLASLI------DIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTR 184
A R L DR L LI + P +F T L RSI+ QQ++ K+ +++ +
Sbjct: 77 ACRQLMRRDRVLKRLIPQLGSQALLPCGQEQAFAT----LARSIIGQQISAKSAKTLWNK 132
Query: 185 FIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDK 244
F+ L A + PE VL L +R +G+S RK YL DLA + L M D+
Sbjct: 133 FVRL---PAAMQPEQVLRLKVDDMRAVGLSARKVDYLVDLALHFTENRLHMDEWAQMSDE 189
Query: 245 SLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQL-LYSLEELPRPSQMDQ 303
+ L + G+ W+ F+I+ L RP+VLP++D G+ +G+ L +S + + R S +
Sbjct: 190 VIIAELMSIRGLSRWTAENFLIYCLGRPNVLPLDDAGLIQGISLNHFSGDPVSR-SDARE 248
Query: 304 LCEKWRPYRSVASWYLWRFVEAK 326
+ E W+P+ +VA+WY+WR +EA+
Sbjct: 249 VAEAWKPWCTVATWYIWRSLEAQ 271
>gi|303256927|ref|ZP_07342941.1| 3-methyladenine DNA glycosylase II [Burkholderiales bacterium
1_1_47]
gi|302860418|gb|EFL83495.1| 3-methyladenine DNA glycosylase II [Burkholderiales bacterium
1_1_47]
Length = 224
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 98/198 (49%), Gaps = 10/198 (5%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A + L AD +A +I +P + PF L RS++ QQ++ KA +I+ RF C
Sbjct: 21 AKKELSEADPVMAQIIRANPEGFLATRGNPFETLLRSVIGQQISVKAAANIWERFAKAC- 79
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
+ PE + + LR G+S RK Y+ D+ R + + + ++ + L
Sbjct: 80 --KEIKPEIITRKHRRTLRTAGLSERKIEYVFDICRFFLENPDAADGFQHRSNEEIIKEL 137
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLY----SLEELP---RPSQMDQ 303
+ G+G W+ MF+IF+L RPDV P+ D G K V Y + EE R +M
Sbjct: 138 CTIKGVGPWTAEMFLIFALRRPDVAPMLDYGFIKAVGQAYFPEIAFEEWSAADRKEEMSS 197
Query: 304 LCEKWRPYRSVASWYLWR 321
+ KW P+++ +WYLWR
Sbjct: 198 VIAKWGPWKTAGTWYLWR 215
>gi|403237149|ref|ZP_10915735.1| hypothetical protein B1040_15389 [Bacillus sp. 10403023]
Length = 288
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 96/170 (56%), Gaps = 5/170 (2%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVS 214
P+ L + I++QQL ++ +RF+ G E PE + L+ LR++ S
Sbjct: 119 PYYCLMKCIIHQQLNMTFAYTLTSRFVTTFGQEIEGTWIHPRPEKIAQLSVADLRELQFS 178
Query: 215 GRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDV 274
GRKA Y+ D ++ G L+ + + + D+ + L + GIG W+ F++F+L RP++
Sbjct: 179 GRKAEYVIDTSKLIAAGELTLADLQSKTDEEVIDTLVKIRGIGKWTAQNFLLFALGRPNL 238
Query: 275 LPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
PI D+G++ ++ LY+L++ P QM++ + W PY S AS YLWR +E
Sbjct: 239 FPIADIGIQNAIKKLYNLDKKPTYEQMEEYSKPWEPYLSYASLYLWRSIE 288
>gi|148553471|ref|YP_001261053.1| DNA-3-methyladenine glycosylase II [Sphingomonas wittichii RW1]
gi|148498661|gb|ABQ66915.1| DNA-3-methyladenine glycosylase II [Sphingomonas wittichii RW1]
Length = 212
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 90/164 (54%), Gaps = 1/164 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ AL RSI YQQL +AG +I R GG P+ + P LR G S KA+
Sbjct: 40 PYEALVRSIAYQQLTARAGDAIIDRLKTRLGGHGFPSPKQLADADPDALRACGFSAAKAA 99
Query: 220 YLHDLARKYQNGIL-SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A +G + A M+D++L LT + GIG W+V M +I+SL R DVLP +
Sbjct: 100 TIQAIAGAALSGFVPGRDAAAAMEDEALIDRLTAIRGIGRWTVEMLLIYSLERLDVLPAD 159
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRF 322
D G R+G +LL +L P + + W P+R+VA+WYLWR
Sbjct: 160 DFGAREGYRLLKALPAPPTARALRGIASAWAPHRTVATWYLWRI 203
>gi|330998822|ref|ZP_08322549.1| base excision DNA repair protein, HhH-GPD family [Parasutterella
excrementihominis YIT 11859]
gi|329576036|gb|EGG57555.1| base excision DNA repair protein, HhH-GPD family [Parasutterella
excrementihominis YIT 11859]
Length = 217
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 98/198 (49%), Gaps = 10/198 (5%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A + L AD +A +I +P + PF L RS++ QQ++ KA +I+ RF C
Sbjct: 14 AKKELSEADPVMAQIIRANPEGFLATRGNPFETLLRSVIGQQISVKAAANIWERFAKAC- 72
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
+ PE + + LR G+S RK Y+ D+ R + + + ++ + L
Sbjct: 73 --KEIKPEIITRKHRRTLRTAGLSERKIEYVFDICRFFLENPDAADGFQHRSNEEVIKEL 130
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLY----SLEELP---RPSQMDQ 303
+ G+G W+ MF+IF+L RPDV P+ D G K V Y + EE R +M
Sbjct: 131 CTIKGVGPWTAEMFLIFALRRPDVAPMLDYGFIKAVGQAYFPEIAFEEWSAADRKEEMSS 190
Query: 304 LCEKWRPYRSVASWYLWR 321
+ KW P+++ +WYLWR
Sbjct: 191 VIAKWGPWKTAGTWYLWR 208
>gi|424776947|ref|ZP_18203922.1| DNA-3-methyladenine glycosylase [Alcaligenes sp. HPC1271]
gi|422887987|gb|EKU30381.1| DNA-3-methyladenine glycosylase [Alcaligenes sp. HPC1271]
Length = 223
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 106/206 (51%), Gaps = 6/206 (2%)
Query: 116 RIIARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAF 175
R++ +P + A L DR L LI H F L RSI+ QQLA
Sbjct: 15 RLVGKP----DYWDDACAQLMKRDRILRKLIPQHGDYWLQHQAPAFTTLVRSIVGQQLAS 70
Query: 176 KAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSD 235
+ ++ + + CG + PE +L L + L +G+ RKA Y+ DLA + +
Sbjct: 71 RTADQLWRKLLDGCGQP--LSPELILELGYEALHGLGLPKRKAEYIVDLATHFDARKIDP 128
Query: 236 SAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEEL 295
A ++ D+++ L + G+G W+ MF+IF+LHRPDVLP++D G+ K + L Y E
Sbjct: 129 QAWQSLSDEAVIADLCAIRGVGRWTADMFLIFNLHRPDVLPLDDAGLLKAISLHYFSGEP 188
Query: 296 PRPSQMDQLCEKWRPYRSVASWYLWR 321
+ ++ + W P+ +VA+W+LWR
Sbjct: 189 VSRFEAREVAQAWAPWCTVATWHLWR 214
>gi|406959945|gb|EKD87163.1| putative DNA-3-methyladenine glycosylase [uncultured bacterium]
Length = 198
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 107/194 (55%), Gaps = 7/194 (3%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTP---FLALTRSILYQQLAFKAGTSIYTRFIA 187
A+ H + D +L +I ++ P F+ L SI+ QQL+ KA +I++RF
Sbjct: 5 ALGHFKKID---PTLYEIALTVKLEALSKPSDYFIDLVDSIISQQLSGKAAATIFSRFKK 61
Query: 188 LCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLF 247
L E + + +L + Q++R+ G+S K Y+ +A K N L+ + + + D+ +
Sbjct: 62 LFPQEK-ITADKLLKIPDQKIREAGISFSKIHYIKGIAEKITNKELNLNKLEKLSDEEVI 120
Query: 248 TMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEK 307
L + GIG W+ MF+IF+L R D+ DLG++ V+ LY LE+ +++ ++ K
Sbjct: 121 MELVKIKGIGIWTAEMFLIFTLLREDIFSAGDLGLQNAVKKLYKLEKDLSKNELLEISSK 180
Query: 308 WRPYRSVASWYLWR 321
W+PYR++AS LWR
Sbjct: 181 WKPYRTLASRILWR 194
>gi|16331437|ref|NP_442165.1| hypothetical protein slr0231 [Synechocystis sp. PCC 6803]
gi|383323179|ref|YP_005384032.1| hypothetical protein SYNGTI_2270 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383326348|ref|YP_005387201.1| hypothetical protein SYNPCCP_2269 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383492232|ref|YP_005409908.1| hypothetical protein SYNPCCN_2269 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384437500|ref|YP_005652224.1| hypothetical protein SYNGTS_2271 [Synechocystis sp. PCC 6803]
gi|451815590|ref|YP_007452042.1| hypothetical protein MYO_122960 [Synechocystis sp. PCC 6803]
gi|1001607|dbj|BAA10235.1| slr0231 [Synechocystis sp. PCC 6803]
gi|339274532|dbj|BAK51019.1| hypothetical protein SYNGTS_2271 [Synechocystis sp. PCC 6803]
gi|359272498|dbj|BAL30017.1| hypothetical protein SYNGTI_2270 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359275668|dbj|BAL33186.1| hypothetical protein SYNPCCN_2269 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359278838|dbj|BAL36355.1| hypothetical protein SYNPCCP_2269 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407961178|dbj|BAM54418.1| hypothetical protein BEST7613_5487 [Bacillus subtilis BEST7613]
gi|451781559|gb|AGF52528.1| hypothetical protein MYO_122960 [Synechocystis sp. PCC 6803]
Length = 152
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 84/145 (57%), Gaps = 1/145 (0%)
Query: 181 IYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVN 240
++ RF+ G G +T+ + P+ LR++G+S K YL A QN S +
Sbjct: 2 LFQRFLD-YGQPKGWTAQTLANVDPELLRELGISRYKTRYLKTWAIALQNNFPSLPELET 60
Query: 241 MDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQ 300
D+++ LT + GIG W+ +F++F L R D+LP DLG+R +Q LY L + P P Q
Sbjct: 61 WGDRAIVEQLTAIKGIGPWTAQLFLLFRLRRQDILPNQDLGIRIAIQKLYQLPDRPNPKQ 120
Query: 301 MDQLCEKWRPYRSVASWYLWRFVEA 325
+ + + W+PYRS+ASWYLWR + A
Sbjct: 121 VSEYGKNWQPYRSLASWYLWRSLSA 145
>gi|410092054|ref|ZP_11288596.1| DNA-3-methyladenine glycosylase II [Pseudomonas viridiflava
UASWS0038]
gi|409760620|gb|EKN45749.1| DNA-3-methyladenine glycosylase II [Pseudomonas viridiflava
UASWS0038]
Length = 221
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 104/197 (52%), Gaps = 9/197 (4%)
Query: 131 AIRHLRNADRQLASLID-----IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRF 185
A L+ D + SLID +HP + P+ AL + + YQQL +AG ++ R
Sbjct: 14 ATEMLKAVDGRWQSLIDHVGPCLHP---VTAAQDPYQALVKGVAYQQLHARAGDAMVMRL 70
Query: 186 IALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSA-IVNMDDK 244
AL P+ + L Q LR G S K+ + +A +G++ D + + D+
Sbjct: 71 RALFPASRFPEPQALAELDDQALRGCGFSASKSRAIKAIAAAKVSGLVPDVVEALTLSDE 130
Query: 245 SLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQL 304
L T LT + G+G W+V M +I+ L + DV+P +D GV +G + LY L P P M L
Sbjct: 131 ELITRLTELPGVGRWTVEMMLIYGLGKLDVMPASDFGVCEGYRRLYGLALKPTPKAMTGL 190
Query: 305 CEKWRPYRSVASWYLWR 321
E++ P+R+VA+WYLWR
Sbjct: 191 AERFAPFRTVAAWYLWR 207
>gi|421129358|ref|ZP_15589558.1| base excision DNA repair protein, HhH-GPD family [Leptospira
kirschneri str. 2008720114]
gi|410358733|gb|EKP05842.1| base excision DNA repair protein, HhH-GPD family [Leptospira
kirschneri str. 2008720114]
Length = 228
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 101/198 (51%), Gaps = 1/198 (0%)
Query: 123 SSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIY 182
S E ++ A LR D L+D + TP+ L +S+L QQL+ K +
Sbjct: 22 SREVRLKKASNWLRKKDPITKKLVDSIGLCKLKTIGTPYQVLIKSVLGQQLSVKVALTFE 81
Query: 183 TRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMD 242
R I+L G + PE +L + ++R+IGVS K + +A Y ++DS + ++
Sbjct: 82 RRLISLAGSKKIPSPEQILKIPNDEMRKIGVSQAKMETIKRIAEAYLKRSITDSKLRKLE 141
Query: 243 DKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMD 302
D + +L + G+G W+ M +IF+L R D INDL +RK V+ Y + + ++
Sbjct: 142 DSDVLKLLCSIKGVGPWTAEMVLIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIQ 200
Query: 303 QLCEKWRPYRSVASWYLW 320
L + PYR++ SWYLW
Sbjct: 201 LLLNTYSPYRTIISWYLW 218
>gi|332665738|ref|YP_004448526.1| HhH-GPD family protein [Haliscomenobacter hydrossis DSM 1100]
gi|332334552|gb|AEE51653.1| HhH-GPD family protein [Haliscomenobacter hydrossis DSM 1100]
Length = 200
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 110/201 (54%), Gaps = 7/201 (3%)
Query: 129 EAAIRHLRNADRQLASLI-DIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIA 187
E + HL + D +LAS++ +I P + + L SI QQL+ KA +I+ RF+A
Sbjct: 3 EQIVAHL-SRDPKLASILPNIAFPDYGADNNDVYFGLLESIASQQLSVKAADTIFKRFLA 61
Query: 188 LCGGEAGVVPETVLALTPQQ-LRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSL 246
+ +L TPQ+ LR +G+S +KA Y+ + A + L D +
Sbjct: 62 IF--PTAYPAAELLVNTPQESLRAVGLSNQKAQYMRNTAAFFLEHQLFQKDWSGFSDDEV 119
Query: 247 FTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLY--SLEELPRPSQMDQL 304
+L+ + G+G W+V M ++F L RPDV PI+DLGVR+ + LY LE + ++ ++
Sbjct: 120 VKLLSSIKGVGKWTVEMILMFVLRRPDVFPIDDLGVRQAMIRLYEVELEGKAQYQKLTEI 179
Query: 305 CEKWRPYRSVASWYLWRFVEA 325
E WRPYR+ A YLWR+ +A
Sbjct: 180 AEAWRPYRTYACRYLWRWKDA 200
>gi|440723952|ref|ZP_20904305.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae BRIP34876]
gi|440725426|ref|ZP_20905695.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae BRIP34881]
gi|440358842|gb|ELP96179.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae BRIP34876]
gi|440368889|gb|ELQ05910.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae BRIP34881]
Length = 280
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 117/210 (55%), Gaps = 14/210 (6%)
Query: 123 SSEGEVEAAIRHLRNADRQLASLIDIHPPPTF---DSFHTPFLALTRSILYQQLAFKAGT 179
S++ E A+ LR+ D Q SLID H P + PF AL +++ YQQL +AG
Sbjct: 61 SADREHAEAVAALRSIDVQWQSLID-HVGPCLHPVSAAQDPFQALVKAVAYQQLHARAGD 119
Query: 180 SIYTRFIALCGGEAGVVPET-------VLALTPQQLRQIGVSGRKASYLHDLARKYQNGI 232
++ R AL ++ +PE ++ L Q LR G S K + +A +G+
Sbjct: 120 AMVRRLRALFLDDS--LPEVSFPGAQALVDLDDQALRSCGFSASKCRAIKAIAAARLDGL 177
Query: 233 LSD-SAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYS 291
+ + SA + M +++L L + G+G W+V M +I+ L + DV+P +D GV +G + LY+
Sbjct: 178 VPEVSAALAMGNEALVERLIQLPGVGRWTVEMMLIYGLGQLDVMPASDFGVCEGYRRLYA 237
Query: 292 LEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
L+ P QM +L E++ PYR++A+WYLWR
Sbjct: 238 LQLKPSHRQMARLAERFAPYRTIAAWYLWR 267
>gi|150391251|ref|YP_001321300.1| methylated-DNA--protein-cysteine methyltransferase [Alkaliphilus
metalliredigens QYMF]
gi|149951113|gb|ABR49641.1| methylated-DNA--protein-cysteine methyltransferase [Alkaliphilus
metalliredigens QYMF]
Length = 355
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 107/193 (55%), Gaps = 4/193 (2%)
Query: 132 IRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGG 191
I +L+ D++L + I+ + PF AL SI+ QQ++ KA +++ R L
Sbjct: 166 IAYLKKKDKKLGAAIERIGKIERGTIADPFTALISSIVSQQISNKAAETVWNRLDELL-- 223
Query: 192 EAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLT 251
+ PE++ Q++ G++ +KA Y+ +A G ++ + + D+ + L+
Sbjct: 224 -ESMTPESITKTELSQIQGCGMTNKKAEYIKGIADVALCGKINFKTLHMLSDQEIIQKLS 282
Query: 252 MVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPY 311
++G+G W+V M +IFSL+RP+V+ DL +R+G+ LY L+EL + Q +Q K+ PY
Sbjct: 283 SLHGVGIWTVEMLLIFSLNRPNVVSYGDLAIRRGMMNLYGLKELSK-EQFNQYRAKYAPY 341
Query: 312 RSVASWYLWRFVE 324
SVAS YLW E
Sbjct: 342 GSVASLYLWVMSE 354
>gi|406913132|gb|EKD52602.1| HhH-GPD [uncultured bacterium]
Length = 199
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASY 220
F L SI+ QQL+ KA +I F+ L + PE +L LR +G+S +K SY
Sbjct: 35 FRDLLESIIGQQLSVKAADTIIQCFMNLFPDPKNIRPEDILGQDDGALRSVGLSRQKISY 94
Query: 221 LHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDL 280
L L+ + L A++++ D+ + T LTMV GIG W+ M +IFSL R DV + DL
Sbjct: 95 LRSLSEFIVSEKLILDALIDLPDELVITHLTMVKGIGRWTAEMMLIFSLGREDVFSVGDL 154
Query: 281 GVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAK 326
G+R V LY ++ ++++++ W PYRS+AS YLW+ ++ K
Sbjct: 155 GLRTAVSRLYGVDR-EDKTKIEEISRIWSPYRSLASLYLWKSLDNK 199
>gi|321257031|ref|XP_003193444.1| DNA-3-methyladenine glycosidase [Cryptococcus gattii WM276]
gi|317459914|gb|ADV21657.1| DNA-3-methyladenine glycosidase, putative [Cryptococcus gattii
WM276]
Length = 461
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 100/181 (55%), Gaps = 6/181 (3%)
Query: 112 LTVPRIIARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHT--PFLALTRSIL 169
LTVP+ P + ++ +AI HL D + + + P F + PF L SI+
Sbjct: 79 LTVPQPTLLPPTLNFDLLSAISHLSALDPRFSLFFEHLPCRPFVNLEAIDPFRTLVTSII 138
Query: 170 YQQLAFKAGTSIYTRFIALCG----GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLA 225
QQ+++ A +I TRF AL G E P+ VL+ LR +G+SGRKA Y+ LA
Sbjct: 139 GQQVSWMAARAINTRFRALFGFTHEREGFPSPQMVLSQDVASLRGVGLSGRKAEYVLSLA 198
Query: 226 RKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKG 285
+ +G LS + + D+ + L V GIG W+V MFMIFSL RPD+L + DLGV+KG
Sbjct: 199 DHFASGQLSTHLLQSGTDEEISKALIAVRGIGQWTVDMFMIFSLRRPDILAVGDLGVQKG 258
Query: 286 V 286
+
Sbjct: 259 L 259
>gi|374291111|ref|YP_005038146.1| putative 3-methyl-adenine DNA glycosylase [Azospirillum lipoferum
4B]
gi|357423050|emb|CBS85893.1| putative 3-methyl-adenine DNA glycosylase [Azospirillum lipoferum
4B]
Length = 212
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 105/212 (49%), Gaps = 5/212 (2%)
Query: 134 HLRNADRQLASLIDIHPPPTFDSFH-TPFLALTRSILYQQLAFKAGTSIYTRFIALCGGE 192
HL D A + + P D T F+ L R ++ QQL+ K +++ + GGE
Sbjct: 5 HLAALDPIFAECLRVGGPVIRDFTRPTGFVGLLRMVMEQQLSTKVALALWAKLQDRLGGE 64
Query: 193 AGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTM 252
V P +LAL + LR G S +K Y LA +G L I ++ D+ L
Sbjct: 65 --VTPGAILALNDETLRACGFSRQKIGYARGLAEAVASGRLDFDIIHDLPDEEAIARLVA 122
Query: 253 VNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYR 312
+ GIG WS ++++ +L RPD+ PI DL ++ GVQ L + P Q+ ++ E WRPYR
Sbjct: 123 LKGIGRWSAEVYLMTTLDRPDIWPIGDLAIQLGVQRLKGWADKPTAKQLIEVAEPWRPYR 182
Query: 313 SVASWYLWRFVEAKGAPSSAAAVAAGAALPQP 344
S+A+ +W A + AA V G LP P
Sbjct: 183 SLAARLVWHHYVALQEQARAARV--GKGLPPP 212
>gi|392593695|gb|EIW83020.1| DNA glycosylase [Coniophora puteana RWD-64-598 SS2]
Length = 446
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 95/174 (54%), Gaps = 19/174 (10%)
Query: 131 AIRHLRNADRQLASL---IDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIA 187
A RHL + D + + + P + H PF ALT+SIL QQ+++ A SI +F+
Sbjct: 112 AKRHLVSVDGRFEDIFAKLQCKPFENLERVH-PFRALTQSILGQQISWLAARSINYKFVR 170
Query: 188 LCGGEAGVVPE-------TVLALTPQQ--------LRQIGVSGRKASYLHDLARKYQNGI 232
L +P+ T TP Q L+ G+S RKA Y+ DLA ++ +G
Sbjct: 171 LFDSSLSEIPDYSIIKSSTSFFPTPAQVAAQDIATLKTAGLSTRKAEYVQDLAARFADGR 230
Query: 233 LSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV 286
LS ++ DD+ L ML V GIG W+V MF IFSL RP++LP+ DLGV++G+
Sbjct: 231 LSTERLLEADDEELAEMLIEVRGIGRWTVDMFAIFSLRRPNILPVGDLGVQRGL 284
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 298 PSQMDQLCEKWRPYRSVASWYLWRFVEA 325
P +M+QL EKW PYRS+ +++W +A
Sbjct: 414 PGEMEQLTEKWEPYRSLGVYFMWALQDA 441
>gi|238798570|ref|ZP_04642047.1| Methylated-DNA--protein-cysteine methyltransferase [Yersinia
mollaretii ATCC 43969]
gi|238717590|gb|EEQ09429.1| Methylated-DNA--protein-cysteine methyltransferase [Yersinia
mollaretii ATCC 43969]
Length = 201
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 108/201 (53%), Gaps = 14/201 (6%)
Query: 124 SEGEVEAAIRHLRNADRQLASLID----IHPPPTFDSFHTPFLALTRSILYQQLAFKAGT 179
S GE E I HL+ D+++A+ ID I P + D F AL R+I+ QQ++ KA
Sbjct: 4 SYGETE--INHLKRRDKKMAAAIDRLGMIARPLSPDLFA----ALIRNIVDQQISVKAAL 57
Query: 180 SIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIV 239
++ R +AL G + P TV A + + ++ G++ +KA Y+ A NG L +AI
Sbjct: 58 TVNARLVALLGT---ITPFTVAAASAEAIQGCGMTMKKAGYIKGAAEAALNGSLDLAAIA 114
Query: 240 NMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPS 299
+ D + T L+ +NG+G W+ M MI SL RPDVL DL +R+G+ LY + LPR
Sbjct: 115 QLPDSDVITQLSNLNGVGIWTAEMLMISSLCRPDVLSWGDLAIRRGMMNLYRHKTLPRER 174
Query: 300 QMDQLCEKWRPYRSVASWYLW 320
PY + AS YLW
Sbjct: 175 FERYRRRY-APYGTTASLYLW 194
>gi|256827461|ref|YP_003151420.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Cryptobacterium curtum DSM 15641]
gi|256583604|gb|ACU94738.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Cryptobacterium curtum DSM 15641]
Length = 234
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 106/198 (53%), Gaps = 16/198 (8%)
Query: 129 EAAIRHLRNADRQLASLIDI--HPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFI 186
+ A +L++ D QLA ID H D+ F A+ I+ QQ++ A +++ R
Sbjct: 8 DEATEYLKSRDPQLACAIDAIGHVYREMDA--DLFSAVVHHIIGQQISTAAQQTVWLRMC 65
Query: 187 ALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSL 246
L G V +++ A +P+QL+ G+S RK Y+ D A K +G AI D
Sbjct: 66 DLLGE---VSAQSITATSPEQLQSCGISFRKVDYIQDFAEKVMDGSFDLDAIEQASDAEA 122
Query: 247 FTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCE 306
L+ + GIG+W+ M ++F L RPDVL +DL +++G++++Y ++ RP L E
Sbjct: 123 IAALSSLRGIGTWTAEMLLLFCLGRPDVLSFDDLAIQRGLRMVYHHRKITRP-----LFE 177
Query: 307 KWR----PYRSVASWYLW 320
K+R PY SVAS YLW
Sbjct: 178 KYRRRYSPYGSVASLYLW 195
>gi|392396195|ref|YP_006432796.1| 3-methyladenine DNA glycosylase [Flexibacter litoralis DSM 6794]
gi|390527273|gb|AFM03003.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Flexibacter litoralis DSM 6794]
Length = 211
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 98/165 (59%), Gaps = 9/165 (5%)
Query: 163 ALTRSILYQQLAFKAGTSIYTRFIALCGG---EAGVVPETVLALTPQQLRQIGVSGRKAS 219
+L ++I+ QQL+ KA +IY RF+ L G A V+ ET + + L+ +G+S +K +
Sbjct: 44 SLIKAIVSQQLSVKAADTIYKRFLGLFDGVSPNATVLLETDI----ETLKSVGLSKQKIT 99
Query: 220 YLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIND 279
Y+ ++A Q +S I ++ + LT + G+G W+V M ++F+L RPDV P+ D
Sbjct: 100 YIREVALFAQKNDISIEFINQKSNEEVIEYLTQIKGVGRWTVEMLLMFTLWRPDVFPVAD 159
Query: 280 LGVRKGVQLLYSLEELPRP--SQMDQLCEKWRPYRSVASWYLWRF 322
LG+++ +Q L EE + +M EKW+PYR+ A+ YLW++
Sbjct: 160 LGIQQAIQKLLKTEEKGKELIKRMIIYSEKWKPYRTFAAMYLWKW 204
>gi|456863456|gb|EMF81923.1| base excision DNA repair protein, HhH-GPD family [Leptospira weilii
serovar Topaz str. LT2116]
Length = 228
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 99/191 (51%), Gaps = 1/191 (0%)
Query: 135 LRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAG 194
LR D LID P + +P+ L +S+L QQL+ K + R I+L G +
Sbjct: 34 LRKKDPITKKLIDSIGPCKLQTIGSPYQVLIKSVLGQQLSVKVALTFERRLISLAGSKKI 93
Query: 195 VVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVN 254
P+ +L + +L++IGVS K + +A Y N ++SDS + +D + +L +
Sbjct: 94 PSPDQILTIPNGKLKEIGVSQAKTETIKRIAEAYLNRVISDSKLRKSEDSDVLNLLCSLK 153
Query: 255 GIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSV 314
G+G W+ M +IF+L R D INDL +RK V+ Y + + ++ + P+R++
Sbjct: 154 GVGPWTAEMVLIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIQNFLMSYSPFRTI 212
Query: 315 ASWYLWRFVEA 325
SWYLW ++
Sbjct: 213 LSWYLWADIDG 223
>gi|242240588|ref|YP_002988769.1| DNA-3-methyladenine glycosylase II [Dickeya dadantii Ech703]
gi|242132645|gb|ACS86947.1| DNA-3-methyladenine glycosylase II [Dickeya dadantii Ech703]
Length = 225
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 3/166 (1%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRF-IALCGGEAGV-VPETVLALTPQQLRQIGVSGRK 217
P+ AL R++ QQL+ +A +I + E G P + P+ LRQ G S RK
Sbjct: 44 PYEALIRAVASQQLSNRAAAAIIAKLQKQFAMEETGFPSPSQLAECPPEHLRQCGFSSRK 103
Query: 218 ASYLHDLARKYQNGILSDSAIVN-MDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLP 276
+ +AR +G++ D A M+D +L T L ++GIG W+V M +I +L R D++P
Sbjct: 104 IDTVQAIARGAISGLVPDRASAALMEDDTLITQLCTLHGIGRWTVEMLLINTLERMDIMP 163
Query: 277 INDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRF 322
++DLG+R+G + LY L P +M L +PYR++A+WYLWR
Sbjct: 164 VDDLGIRQGFRYLYQLPSDPSRKEMLALSAPCQPYRTLAAWYLWRI 209
>gi|294654316|ref|XP_456352.2| DEHA2A00418p [Debaryomyces hansenii CBS767]
gi|199428784|emb|CAG84297.2| DEHA2A00418p [Debaryomyces hansenii CBS767]
Length = 300
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 110/227 (48%), Gaps = 39/227 (17%)
Query: 128 VEAAIRHLRNADRQLASLIDIHPPPT--FDSFHTPFLALTRSILYQQLAFKAGTSIYTRF 185
E AI D L+ I P D + L + I+ QQL+ A SI T+F
Sbjct: 65 FEKAIALFEKTDPALSDFIKSCDDPNTLMDVKMNAYQTLVKIIISQQLSTSAARSIMTKF 124
Query: 186 IALCGGEAGVV--------------PETVLALTPQQLRQIGVSGRKASYLHDLARKY--Q 229
I L E PE V +P++LR G+S RKA YL ++ K+ +
Sbjct: 125 IKLFLKEGESTEPDHQFKAHPHFPTPEIVKETSPERLRSAGISFRKAGYLLIISEKFSDK 184
Query: 230 NGILSDSAIVN-MDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQL 288
N +L+D +N M ++ + +L + GIG W+V +F++ + R D+ PI+D G+RKG+ +
Sbjct: 185 NYLLNDDKKLNDMSNEDIARLLIDLKGIGPWAVDIFLLLYMKRSDIFPISDAGIRKGLSM 244
Query: 289 L--------------YSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
L S+EE M++ E W+PYRSVASWYL +
Sbjct: 245 LIQNTSGKKGKKLNYLSIEE------MEKYSENWKPYRSVASWYLMK 285
>gi|238751783|ref|ZP_04613271.1| Methylated-DNA--protein-cysteine methyltransferase [Yersinia rohdei
ATCC 43380]
gi|238710054|gb|EEQ02284.1| Methylated-DNA--protein-cysteine methyltransferase [Yersinia rohdei
ATCC 43380]
Length = 207
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 111/201 (55%), Gaps = 14/201 (6%)
Query: 124 SEGEVEAAIRHLRNADRQLASLID----IHPPPTFDSFHTPFLALTRSILYQQLAFKAGT 179
S GE E I HL+ D+++A+ I+ I P + D F AL R+I+ QQ++ KA
Sbjct: 9 SYGETE--INHLKKRDKKMAAAIERLGMIARPLSPDLFA----ALIRNIVDQQISVKAAQ 62
Query: 180 SIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIV 239
++ +R + L G V P T+ A + ++ G++ RKA Y+ A NG L AI
Sbjct: 63 TVNSRLVTLLGT---VTPMTIAAAPIEAIQACGMTMRKAGYIKGAADAALNGSLDLLAIS 119
Query: 240 NMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPS 299
+ D + T L+ +NG+G W+ M +I SL RPDVL DL +R+G+ LY + LPR
Sbjct: 120 QLPDNEVITQLSSLNGVGIWTAEMLLISSLSRPDVLSWGDLAIRRGMMNLYRHKTLPR-E 178
Query: 300 QMDQLCEKWRPYRSVASWYLW 320
+ ++ ++ PY + AS YLW
Sbjct: 179 RFEKYRRRYAPYGTTASLYLW 199
>gi|389872127|ref|YP_006379546.1| base excision DNA repair protein [Advenella kashmirensis WT001]
gi|388537376|gb|AFK62564.1| base excision DNA repair protein [Advenella kashmirensis WT001]
Length = 200
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 102/200 (51%), Gaps = 5/200 (2%)
Query: 121 PLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTS 180
P+ GE E + L D++LA I+ + F AL + I+ QQ++ A +
Sbjct: 2 PIFQYGETE--VEWLSKRDKRLAQAIERIGLIERSTMPDLFTALIQCIIDQQISAAAART 59
Query: 181 IYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVN 240
+ R + +CGG + E +LA L++ G S RK Y+ +A Q G L SAI
Sbjct: 60 VNARILQVCGGH--MSAEALLAAGADNLQRCGTSMRKVQYMLGVAEAVQAGKLDLSAIPA 117
Query: 241 MDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQ 300
MDD + LT + GIG W+ M MIFSL RPDVL DL +++G+ LY+ +ELPR
Sbjct: 118 MDDAQVIQTLTGLKGIGIWTAEMLMIFSLGRPDVLSWGDLAIQRGIMRLYNHKELPRERF 177
Query: 301 MDQLCEKWRPYRSVASWYLW 320
PY S AS YLW
Sbjct: 178 ERYRRRY-SPYGSTASLYLW 196
>gi|358065198|ref|ZP_09151748.1| hypothetical protein HMPREF9473_03811 [Clostridium hathewayi
WAL-18680]
gi|356696744|gb|EHI58353.1| hypothetical protein HMPREF9473_03811 [Clostridium hathewayi
WAL-18680]
Length = 213
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 96/164 (58%), Gaps = 12/164 (7%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASY 220
F AL SI+ QQ++ KAG +I+ R +C G + V PET+ ++L+ G+S RK Y
Sbjct: 40 FGALVSSIVDQQISTKAGQTIWKR---MCDGLSEVTPETIGKCPVEELQAFGISFRKVEY 96
Query: 221 LHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDL 280
+ + ARK +G L+ A+ M D+ + L+ + G+G W+ M M FS+ RPDV DL
Sbjct: 97 IKNAARKVLDGELNLEALHTMSDEEVCRELSSLKGVGVWTAEMLMTFSMQRPDVFSFGDL 156
Query: 281 GVRKGVQLLYSLEELPRPSQMDQLCEKWR----PYRSVASWYLW 320
+ +G+++LY ++ + +L EK+R PY +VAS YLW
Sbjct: 157 AIHRGLRMLYHHRKIDK-----KLFEKYRRRYSPYGTVASLYLW 195
>gi|406705668|ref|YP_006756021.1| HhH-GPD superfamily base excision DNA repair protein [alpha
proteobacterium HIMB5]
gi|406651444|gb|AFS46844.1| HhH-GPD superfamily base excision DNA repair protein [alpha
proteobacterium HIMB5]
Length = 211
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 108/197 (54%), Gaps = 5/197 (2%)
Query: 131 AIRHLRNADRQLASLIDIHPPPT---FDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIA 187
A ++L N D+ + LI + P+ S F +L +SI+ QQ++ A S++ RF
Sbjct: 11 AKKYLSNKDKIMEKLIKSYKSPSEVILTSRKDIFFSLCKSIIGQQISVAAANSVFLRFKK 70
Query: 188 LCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLF 247
+C G+ + P V LT +LR+ G+S +K + L+++ + I M+D+
Sbjct: 71 VCNGK--IKPLIVSKLTTAKLRKCGLSRQKILGIKSLSKQMIEKSFNPKLIEKMNDEEAI 128
Query: 248 TMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEK 307
L+ + IG WS M ++F+ +RP++ PI D+G+ + + Y + LP ++ L ++
Sbjct: 129 EYLSKLRQIGKWSAEMILLFTYNRPNIWPIQDIGLLRAISKNYKKDYLPPEKFVNLLKKR 188
Query: 308 WRPYRSVASWYLWRFVE 324
+ PY SVA+WYLWR ++
Sbjct: 189 FSPYCSVATWYLWRSID 205
>gi|427727520|ref|YP_007073757.1| HhH-GPD superfamily base excision DNA repair protein [Nostoc sp.
PCC 7524]
gi|427363439|gb|AFY46160.1| HhH-GPD superfamily base excision DNA repair protein [Nostoc sp.
PCC 7524]
Length = 240
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 102/192 (53%), Gaps = 3/192 (1%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A+ L D LA ++ + P + F L + IL QQ++ A +++ R L
Sbjct: 47 ALNMLAQIDSDLAHVLAVLGNPPLWNREPGFPTLVQIILEQQVSLAAAQAVFNR---LSQ 103
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
+ P L +QL+ IG S +K+ Y +LA NG L+ + + +MDD+++ L
Sbjct: 104 TVTPLTPNNFLTFDHEQLKAIGFSRQKSLYCRELADAIVNGQLNLTQLESMDDRTIRNQL 163
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRP 310
++ GIG W+V ++++ +L RPD P DLG+ Q L L E P P Q++ + + WRP
Sbjct: 164 KLIKGIGDWTVDIYLLMALKRPDAFPKGDLGLVIATQKLKGLAERPTPIQLEAIAQNWRP 223
Query: 311 YRSVASWYLWRF 322
+R+VA+ LW +
Sbjct: 224 WRAVAARILWHY 235
>gi|406985582|gb|EKE06329.1| DNA-3-methyladenine glycosylase II [uncultured bacterium]
Length = 189
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 95/174 (54%), Gaps = 14/174 (8%)
Query: 151 PPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQ 210
PT S + F L +I QQL+ KA +I+ R L + +L +LR+
Sbjct: 28 KPTKKSLY--FEDLVDAICSQQLSGKAALTIFGRVKKLL---VKITSAKILKTDDLKLRE 82
Query: 211 IGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLH 270
G+S +K SY+ DLA + +N L + ++D + L V GIG W+ MF++FSL
Sbjct: 83 CGLSWQKVSYVKDLATQVENLKLKIKNLNKLEDNEVIEQLVQVKGIGRWTAEMFLMFSLA 142
Query: 271 RPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
RPD+LP DLG+ K ++ L + + D EKW+P+R+VASWYLWR +E
Sbjct: 143 RPDILPTADLGINKALKNL-------KIKEKDT--EKWKPHRTVASWYLWRSLE 187
>gi|319943840|ref|ZP_08018121.1| methylated-DNA--protein-cysteine methyltransferase [Lautropia
mirabilis ATCC 51599]
gi|319743073|gb|EFV95479.1| methylated-DNA--protein-cysteine methyltransferase [Lautropia
mirabilis ATCC 51599]
Length = 222
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 114/231 (49%), Gaps = 36/231 (15%)
Query: 121 PLSSEGEVEAAIRHLRNADRQLASLID----IHPPPTFDSFHTPFLALTRSILYQQLAFK 176
P G+ E + HLR D +LA ID I D FH AL SI+ QQ++ K
Sbjct: 9 PCFRYGQTE--LDHLRTRDPRLAVAIDRIGLIRREVQPDLFH----ALVHSIIGQQISTK 62
Query: 177 AGTSIY----TRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGI 232
A T+I+ TRF GV PE + + +L+ +G++ RKA Y+ D+AR G
Sbjct: 63 AQTTIWGKMQTRF-------PGVSPEVMASCELDELQGVGITFRKAGYIQDIARSIVEGR 115
Query: 233 LSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSL 292
A+ +DD++L L+ GIG W+ M M+FSL RPD++ DL + +G+++LY
Sbjct: 116 TDLHALAQLDDEALCHALSQFRGIGVWTAEMLMLFSLQRPDIVSYGDLAILRGMRMLYRH 175
Query: 293 EELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAKGAPSSAAAVAAGAALPQ 343
+ P + ++ PY S AS YLW AG ALP+
Sbjct: 176 RSIT-PQLFARYRRRYSPYGSTASLYLW--------------AIAGGALPE 211
>gi|415885802|ref|ZP_11547625.1| YfjP [Bacillus methanolicus MGA3]
gi|387588455|gb|EIJ80776.1| YfjP [Bacillus methanolicus MGA3]
Length = 286
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 104/198 (52%), Gaps = 11/198 (5%)
Query: 134 HLRNADRQLASLIDIH--PPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGG 191
H +N L + D H P D P+ L + I++QQL ++ RF+ G
Sbjct: 93 HFQNT--ALKKIFDEHYGTPLVLD--FDPYSCLLKCIIHQQLNLAFAHTLTERFVKTFGF 148
Query: 192 -EAGVV----PETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSL 246
E GV PE + +LT +QLRQ+ SGRK+ Y+ +A++ G L + D+ +
Sbjct: 149 QEKGVWFYPPPEKIASLTVEQLRQLQFSGRKSEYVIGIAKEAAEGRLRFDELDMKSDEEI 208
Query: 247 FTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCE 306
L + G+G W+V F+IF L RP+ P D+G++ ++ LY+LE P ++++ +
Sbjct: 209 MEELIRLRGVGPWTVQNFLIFGLGRPNQFPTADIGIQNALKKLYNLERKPTIEEINEYKK 268
Query: 307 KWRPYRSVASWYLWRFVE 324
W PY S AS YLWR +E
Sbjct: 269 SWAPYLSYASLYLWRSIE 286
>gi|448726329|ref|ZP_21708737.1| HhH-GPD family protein [Halococcus morrhuae DSM 1307]
gi|445795407|gb|EMA45934.1| HhH-GPD family protein [Halococcus morrhuae DSM 1307]
Length = 215
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 94/184 (51%), Gaps = 3/184 (1%)
Query: 142 LASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVL 201
L +LI+ D+ PF L SI+ Q ++ + ++ R V P TVL
Sbjct: 35 LRALIEEFGEIEIDTAEEPFERLVVSIVNQSISTASANAVRERVFERFDE---VTPATVL 91
Query: 202 ALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSV 261
A +L G+ K Y+ + AR ++ L + + D+ + L + GIG W+
Sbjct: 92 AADADELSDAGLGETKTEYVRNAARAFRERDLGREGLADASDEEVIDELGEIRGIGEWTA 151
Query: 262 HMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
M++IF+L R DVLP+ DL VR+G++ LY +M ++ E+WRPYRS+A+ Y+W
Sbjct: 152 RMYLIFALGREDVLPLGDLAVRRGIESLYGDGGDLTRGEMREIAERWRPYRSLATLYIWH 211
Query: 322 FVEA 325
E+
Sbjct: 212 HYES 215
>gi|302187067|ref|ZP_07263740.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae pv.
syringae 642]
Length = 226
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 114/210 (54%), Gaps = 14/210 (6%)
Query: 123 SSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHT---PFLALTRSILYQQLAFKAGT 179
S++ E A+ LR+ D Q LID H P PF AL +++ YQQL +AG
Sbjct: 7 SADREHAQAVASLRSIDPQWQLLID-HVGPCLHPVSVAQDPFQALVKAVAYQQLHARAGD 65
Query: 180 SIYTRFIALCGGEAGVVPET-------VLALTPQQLRQIGVSGRKASYLHDLARKYQNGI 232
++ +R AL ++ PE ++ L Q LR G S K + +A G+
Sbjct: 66 AMVSRLRALFLDDSS--PEVSFPGAQALVELDDQALRSCGFSASKCRAIKAIAAARLGGL 123
Query: 233 LSD-SAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYS 291
+ + SA + M +++L L + G+G W+V M +I+ L + DV+P +D GV +G + LY+
Sbjct: 124 VPEVSAALAMGNEALVERLIQLPGVGRWTVEMMLIYGLGQLDVMPASDFGVCEGYRRLYA 183
Query: 292 LEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
LE P QM +L E++ PYR++A+WYLWR
Sbjct: 184 LELKPSHRQMARLAERFAPYRTIAAWYLWR 213
>gi|393759332|ref|ZP_10348148.1| DNA-3-methyladenine glycosylase [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
gi|393162560|gb|EJC62618.1| DNA-3-methyladenine glycosylase [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
Length = 223
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 109/207 (52%), Gaps = 8/207 (3%)
Query: 116 RIIARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAF 175
R++ +P + A L DR L LI H F L RSI+ QQLA
Sbjct: 15 RLVGKP----DYWDDACAQLMKRDRILRKLIPQHGDYWLQHQAPAFTTLVRSIVGQQLAS 70
Query: 176 KAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSD 235
+ ++ + + CG + P+ +L L + L +G+ RKA Y+ DLA + +
Sbjct: 71 RTADQLWAKLLEGCG--QALSPQLILELGYETLHGLGLPKRKAEYIVDLATHFDARKIDP 128
Query: 236 SAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV-QLLYSLEE 294
A ++ D+++ L + G+G W+ MF+IF+LHRPDVLP++D G+ K + Q +S E
Sbjct: 129 QAWQSLSDEAVIADLCAIRGVGRWTADMFLIFNLHRPDVLPLDDAGLLKAISQHYFSGEP 188
Query: 295 LPRPSQMDQLCEKWRPYRSVASWYLWR 321
+ R + ++ + W P+ +VA+W+LWR
Sbjct: 189 VSR-FEAREVAQAWAPWCTVATWHLWR 214
>gi|410940722|ref|ZP_11372523.1| base excision DNA repair protein, HhH-GPD family [Leptospira
noguchii str. 2006001870]
gi|410784048|gb|EKR73038.1| base excision DNA repair protein, HhH-GPD family [Leptospira
noguchii str. 2006001870]
Length = 228
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 102/201 (50%), Gaps = 1/201 (0%)
Query: 125 EGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTR 184
E +++A LR D LID + TP+ L +S+L QQL+ K + R
Sbjct: 24 EARLKSASNWLRKKDPITKKLIDSIGLCKLKTIGTPYQVLIKSVLGQQLSVKVALTFERR 83
Query: 185 FIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDK 244
I+L G + PE +L + ++R+IG+S K + +A Y ++DS + ++D
Sbjct: 84 LISLAGSKKIPSPEQILKIPNDKMRKIGISQAKTETIKRIAEAYLKRSITDSKLRKLEDF 143
Query: 245 SLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQL 304
+ +L + G+G W+ M +IF+L R D INDL +RK V+ Y + + ++
Sbjct: 144 DVLNLLCSIKGVGPWTAEMTLIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIQLF 202
Query: 305 CEKWRPYRSVASWYLWRFVEA 325
+ PYR++ SWYLW V+
Sbjct: 203 LNTYSPYRTILSWYLWADVDG 223
>gi|448296761|ref|ZP_21486812.1| HhH-GPD family protein [Halalkalicoccus jeotgali B3]
gi|445580744|gb|ELY35118.1| HhH-GPD family protein [Halalkalicoccus jeotgali B3]
Length = 197
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 101/188 (53%), Gaps = 5/188 (2%)
Query: 134 HLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEA 193
HLR+ D +A LI+ + P + F L S++ Q ++ A +++ R L G
Sbjct: 8 HLRD-DPVMARLIEEYDPYAEPEWGEEFERLVVSVISQSISTAAASAVRERVYELFDGP- 65
Query: 194 GVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMV 253
+ PE VLA +L G + Y+++ A + L+ + + D+ + LT +
Sbjct: 66 -ITPEAVLATDDDELAAAGFGTQNTEYVNNAAEAFLERDLTREGLADHTDREVIEELTRI 124
Query: 254 NGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYS-LEELPRPSQMDQLCEKWRPYR 312
GIG W+ M+++F L R DVLP+ DL VR+G++ LY+ EEL R +M ++ + WRPYR
Sbjct: 125 RGIGEWTARMYLLFVLEREDVLPLGDLAVRRGIETLYNDGEELTR-EEMTEIAKAWRPYR 183
Query: 313 SVASWYLW 320
S + Y+W
Sbjct: 184 STGTKYVW 191
>gi|409044793|gb|EKM54274.1| hypothetical protein PHACADRAFT_210092 [Phanerochaete carnosa
HHB-10118-sp]
Length = 461
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 90/166 (54%), Gaps = 25/166 (15%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCG-----------GEAGVVPET--VLALTPQ 206
PF LT SIL QQ+++ A SI +FI L G P V+ +
Sbjct: 151 PFRTLTHSILGQQISWLAARSITHKFIRLFDPSLPEKPTDHHGPDTFFPTAHQVIQMDIP 210
Query: 207 QLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMI 266
LR G+S RKA Y+ DLA ++ +G LS ++ +D+ L+ +LT V GIG W+V MF I
Sbjct: 211 TLRTAGLSQRKAEYILDLAARFADGRLSTEKLLEAEDEELYELLTAVRGIGRWTVDMFAI 270
Query: 267 FSLHRPDVLPINDLGVRKGV------------QLLYSLEELPRPSQ 300
FSL RPD+LP+ DLGV++G+ L S ++LPRP +
Sbjct: 271 FSLRRPDILPVGDLGVQRGILRWFLSLHSPDYNLTISPKKLPRPDE 316
>gi|406926336|gb|EKD62582.1| HhH-GPD [uncultured bacterium]
Length = 199
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 106/200 (53%), Gaps = 2/200 (1%)
Query: 128 VEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIA 187
++ A+ HL+ D L ++ TF F+ + +I+ QQL+ +I RF
Sbjct: 1 MKTALAHLK-GDPVLKKILHKSYKFTFGKSENLFVDIIENIIGQQLSSGPAETITNRFWG 59
Query: 188 LCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLF 247
L P+ VLA+ +LR +G+S KASY+ +L+R+ L + +DD +
Sbjct: 60 LFTEPLYPAPDVVLAVPDDKLRAVGMSWAKASYIKNLSREIVELRLDLDLVKTLDDNHVI 119
Query: 248 TMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEK 307
LT V GIG W+ M +IF L+RPDV + DLG+R V LY + ++++ + K
Sbjct: 120 VELTKVKGIGRWTAEMILIFHLNRPDVFSLGDLGLRTAVSKLYRVNR-DDVAKIEAISLK 178
Query: 308 WRPYRSVASWYLWRFVEAKG 327
W PYRS+AS YLW+ ++ K
Sbjct: 179 WSPYRSLASRYLWKSLDEKA 198
>gi|358390287|gb|EHK39693.1| hypothetical protein TRIATDRAFT_133222 [Trichoderma atroviride IMI
206040]
Length = 522
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 107/224 (47%), Gaps = 30/224 (13%)
Query: 131 AIRHLRNADRQLASLIDIH-----PPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRF 185
A HL D ++ LI+ H P PF +L SI+ QQ++ A SI +F
Sbjct: 141 ACDHLIKVDERMRLLIEKHHCHVFSPEGLAEKIDPFESLVSSIISQQVSGAAARSIKAKF 200
Query: 186 IAL----------CGGEAGV----VPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNG 231
IAL E+ V P V A + ++LR G+S RKA Y+ LA K+ +G
Sbjct: 201 IALFFPQDEASQPTNYESAVDRFPAPSDVAACSIEKLRTAGLSQRKAEYVQGLAEKFASG 260
Query: 232 ILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYS 291
++ + + D+ L L V G+G W+V MF F+L R +V + DLG+++G+
Sbjct: 261 EITAQMLHDAPDEELMEKLVAVRGLGKWTVEMFAFFALKRMNVFSLGDLGIQRGMAAFVG 320
Query: 292 LE-----------ELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
+ + M +L +K+RPYRS+ WY+W+ E
Sbjct: 321 RDVAKLKNKGGKWKYMSEQDMVELSDKFRPYRSLFMWYMWKVEE 364
>gi|336268991|ref|XP_003349257.1| hypothetical protein SMAC_05541 [Sordaria macrospora k-hell]
gi|380089830|emb|CCC12363.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 415
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 112/257 (43%), Gaps = 54/257 (21%)
Query: 122 LSSEGEVEAAIRHLRNADRQLASLIDIHP-----PPTFDSFHTPFLALTRSILYQQLAFK 176
+++E +E A HL D ++ LID HP P PF +L SI+ QQ++
Sbjct: 152 ITTENILEKACAHLIAVDPRMKPLIDKHPCRIFSPEGLAEQIDPFESLVSSIISQQVSGA 211
Query: 177 AGTSIYTRFIALCGG---------EAGV----------------------VPETVLALTP 205
A SI +F+AL E G P VL
Sbjct: 212 AAKSIKGKFVALFDDPSLDQDQDDEDGKDTPPGHPAEDQPSSKRRKRRFPTPSLVLQKDL 271
Query: 206 QQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFM 265
LR G+S RKA Y+H LA K+ +G LS S + + L + L V G+G W+V MF
Sbjct: 272 PTLRTAGLSQRKAEYIHGLASKFASGELSASLLASAPYDELVSKLVAVRGLGLWTVEMFA 331
Query: 266 IFSLHRPDVLPINDLGVRKGVQLLYSLE------------------ELPRPSQMDQLCEK 307
F+L R DV + DLGV++G+ + + +M ++ E+
Sbjct: 332 CFALKRMDVFSLGDLGVQRGMAAFVGRDVKKLKNGNGKGNGKDKKWKYMSEGEMKEISER 391
Query: 308 WRPYRSVASWYLWRFVE 324
+RPYRS+ WY+WR E
Sbjct: 392 FRPYRSLFMWYMWRVEE 408
>gi|303316542|ref|XP_003068273.1| HhH-GPD family base excision DNA repair protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240107954|gb|EER26128.1| HhH-GPD family base excision DNA repair protein [Coccidioides
posadasii C735 delta SOWgp]
gi|320038045|gb|EFW19981.1| DNA-3-methyladenine glycosylase [Coccidioides posadasii str.
Silveira]
Length = 437
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 112/272 (41%), Gaps = 67/272 (24%)
Query: 118 IARPLSSEGEV-EAAIRHLRNADRQLASLIDIHPPPTFDSFH-----TPFLALTRSILYQ 171
I RP ++ G + E + HL D +L S+I+ +P P F PF AL I+ Q
Sbjct: 156 IPRPTATTGNILEQGLAHLLKVDPKLRSVIEKYPSPPFSPSDLAEEIDPFQALASGIIGQ 215
Query: 172 QLAFKAGTSIYTRFIAL------CGGEAGVV----------------------------- 196
Q++ A SI +F+AL G G +
Sbjct: 216 QVSGAAAKSIKKKFVALFHKGLAVAGTTGALADATEVKSENAKQANDYDYGTNTEKSINE 275
Query: 197 --------------PETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMD 242
PE V+ LR G+S RKA Y+ LA K+ NG LS ++
Sbjct: 276 NDRKSEDGAVRFPTPEEVMKCDLATLRTAGLSQRKAEYIQGLAEKFVNGELSARMLLTAS 335
Query: 243 DKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLE--------- 293
D+ + L V G+G WSV MF +F L R DV DLGV++G+ +
Sbjct: 336 DEDVLEKLIAVRGLGKWSVEMFSVFGLKRMDVFSTGDLGVQRGMAAFVGRDIAKLKAKGG 395
Query: 294 ---ELPRPSQMDQLCEKWRPYRSVASWYLWRF 322
+ +M ++ + PYRS+ WY+WR+
Sbjct: 396 GKFKYMAEKEMLEIAAPFAPYRSLFMWYMWRW 427
>gi|406883303|gb|EKD30922.1| hypothetical protein ACD_77C00448G0005 [uncultured bacterium]
Length = 198
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 96/160 (60%), Gaps = 4/160 (2%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASY 220
F+AL SI+ QQ++ KA +++ RFIAL V PE +LA P +++ G+S +K Y
Sbjct: 41 FVALVSSIVAQQISGKAAETVWKRFIALI---VEVSPENILAADPLLMQKCGMSHKKVGY 97
Query: 221 LHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDL 280
+ +A+ +G ++ + M+D + L+ + G+G W+ M +IFSL RPDVL D
Sbjct: 98 IIGIAQAATDGTINFKELSTMNDSEIIGKLSSLRGVGVWTAEMLLIFSLERPDVLSWGDF 157
Query: 281 GVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLW 320
++KG+ L+ LE + + +Q ++ + + PY S+AS YLW
Sbjct: 158 AIKKGLMKLHGLESISK-AQFEEYRKLYSPYNSIASLYLW 196
>gi|398331296|ref|ZP_10516001.1| DNA-3-methyladenine glycosylase II [Leptospira alexanderi serovar
Manhao 3 str. L 60]
Length = 228
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 98/193 (50%), Gaps = 1/193 (0%)
Query: 128 VEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIA 187
++ A LR D LID P + P+ L +S+L QQL+ K + R IA
Sbjct: 27 LQKASDWLRKKDPITKKLIDSVGPCKLQTIGNPYQVLIKSVLGQQLSVKVALTFERRLIA 86
Query: 188 LCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLF 247
L + PE +L + ++R+IGVS K + +A Y N ++DS + ++D +
Sbjct: 87 LAESKKIPSPEQILRIPTSEMRKIGVSQAKTETIQRVAEAYLNRDITDSKLRKLEDSDVL 146
Query: 248 TMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEK 307
+L G+G W+ M +IF+L R D INDL +RK V+ Y + + ++ +
Sbjct: 147 NLLCSFKGVGPWTAEMVLIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIQHFLKS 205
Query: 308 WRPYRSVASWYLW 320
+ P+R++ SWYLW
Sbjct: 206 YSPFRTILSWYLW 218
>gi|433543911|ref|ZP_20500308.1| DNA-3-methyladenine glycosylase II [Brevibacillus agri BAB-2500]
gi|432184811|gb|ELK42315.1| DNA-3-methyladenine glycosylase II [Brevibacillus agri BAB-2500]
Length = 309
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 115/229 (50%), Gaps = 26/229 (11%)
Query: 123 SSEGEVEAAIRHLRNADR-------------QLASLIDIHPPPTFDSFHTPFLALTRSIL 169
+ + E+E IRH+ +AD +LA L+D F ++ ++I+
Sbjct: 75 AEQRELERTIRHVFSADLDLLPIYEQMREEPELAVLVDRFSGLRLMHDSDLFQSMVKTII 134
Query: 170 YQQLAFKAGTSIYTRFIALCGGEA----GV------VPETVLALTPQQLRQIGVSGRKAS 219
QQ+ ++ R + L G E GV E V L+ + LR + S RKA
Sbjct: 135 GQQINLTFAANLTQRLLTLAGEEVADEQGVKFLAFPTAEAVARLSTEDLRPLQFSQRKAE 194
Query: 220 YLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIND 279
Y+ D AR +G + + M+D+ + LT + GIG W+V ++F + RP++LP D
Sbjct: 195 YIIDYARAIVDGKVDLERLWAMEDEEIIAHLTPLRGIGRWTVECLLMFGMGRPNLLPAAD 254
Query: 280 LGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAKGA 328
+G+R G+ L+Y ++ P ++ ++ E+W P+RS+ S Y+W EA GA
Sbjct: 255 IGLRNGIALVYKMDNKPDEREIRRIGERWAPWRSIYSLYIW---EAVGA 300
>gi|359727612|ref|ZP_09266308.1| DNA-3-methyladenine glycosylase II [Leptospira weilii str.
2006001855]
gi|417779371|ref|ZP_12427163.1| base excision DNA repair protein, HhH-GPD family [Leptospira weilii
str. 2006001853]
gi|410780706|gb|EKR65293.1| base excision DNA repair protein, HhH-GPD family [Leptospira weilii
str. 2006001853]
Length = 228
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 99/191 (51%), Gaps = 1/191 (0%)
Query: 135 LRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAG 194
LR D LID P + P+ L +S+L QQL+ K + R I+L G +
Sbjct: 34 LRKKDPITKKLIDSIGPCKLKTIGNPYQVLIKSVLGQQLSVKVALTFERRLISLAGSKKI 93
Query: 195 VVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVN 254
P+ ++ + ++L++IGVS K + +A Y N ++DS + ++D + +L +
Sbjct: 94 PSPDQIVTIPNEKLKKIGVSQAKTETIKRIAEAYLNRDITDSKLRKLEDSDVLNLLCSLK 153
Query: 255 GIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSV 314
G+G W+ M +IF+L R D INDL +RK V+ Y + + ++ + P+R++
Sbjct: 154 GVGPWTAEMVLIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIQHFLMSYSPFRTI 212
Query: 315 ASWYLWRFVEA 325
SWYLW ++
Sbjct: 213 LSWYLWADIDG 223
>gi|421106158|ref|ZP_15566734.1| base excision DNA repair protein, HhH-GPD family [Leptospira
kirschneri str. H2]
gi|410008880|gb|EKO62540.1| base excision DNA repair protein, HhH-GPD family [Leptospira
kirschneri str. H2]
Length = 228
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 100/198 (50%), Gaps = 1/198 (0%)
Query: 123 SSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIY 182
S E ++ A LR D L+D + TP+ L +S+L QQL+ K +
Sbjct: 22 SREVRLKKASNWLRKKDPITKKLVDSIGLCKLKTIGTPYQVLIKSVLGQQLSVKVALTFE 81
Query: 183 TRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMD 242
R I+L G + PE +L + ++R+IGVS K + +A Y ++DS + ++
Sbjct: 82 RRLISLAGSKKIPSPEQILKIPNDEMRKIGVSQAKTETIKRIAEAYLKRSITDSKLHKLE 141
Query: 243 DKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMD 302
D + +L + G+G W+ M +IF+L R D INDL +RK V+ Y + + ++
Sbjct: 142 DSDVLKLLCSIKGVGPWTAEMVLIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIQ 200
Query: 303 QLCEKWRPYRSVASWYLW 320
+ PYR++ SWYLW
Sbjct: 201 LFLNTYSPYRTILSWYLW 218
>gi|409730391|ref|ZP_11271964.1| HhH-GPD family protein [Halococcus hamelinensis 100A6]
gi|448724637|ref|ZP_21707143.1| HhH-GPD family protein [Halococcus hamelinensis 100A6]
gi|445785465|gb|EMA36256.1| HhH-GPD family protein [Halococcus hamelinensis 100A6]
Length = 187
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 99/184 (53%), Gaps = 6/184 (3%)
Query: 142 LASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVL 201
+A L++ + P D + F L SI+ Q ++ + ++ R AL G V PE VL
Sbjct: 10 MAELVEEYGPLELDPAESEFERLVISIVNQSISTASANAVRERTFALFDG---VTPEAVL 66
Query: 202 ALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSV 261
A + L + G+ K Y+ + A + L+ + + + D+ + L ++GIG W+
Sbjct: 67 AADEETLVEAGLGKAKTEYIRNAAEAFIERDLTRAGLADATDQEVIDELAEIHGIGEWTG 126
Query: 262 HMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
M++IF+L R DV P+ DL VR+ V+ LY E+ R ++M + E+W P RS+A+ YLW
Sbjct: 127 RMYLIFALGREDVFPVGDLAVRRAVESLYG--EMSR-AEMREFAERWEPSRSLATLYLWE 183
Query: 322 FVEA 325
E+
Sbjct: 184 HYES 187
>gi|311029128|ref|ZP_07707218.1| YfjP [Bacillus sp. m3-13]
Length = 293
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 96/176 (54%), Gaps = 9/176 (5%)
Query: 154 FDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQL 208
FD +H L + I++QQ+ K ++ RF+ G E V PE V L +Q+
Sbjct: 114 FDLYH----CLMKCIIHQQVNMKFAHTLTQRFVHTFGFEKEGVWFYPKPEDVATLDYEQI 169
Query: 209 RQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFS 268
++ +S RKA Y+ D ++ +G L ++ NM D+ + L V GIG W+V ++F
Sbjct: 170 TELKMSRRKAEYIIDTSKLIASGELPLYSLDNMSDEEILKKLIKVRGIGPWTVQNLLLFG 229
Query: 269 LHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
L RP++ PI D+G++ ++ L L++ P QM + + W PY S AS YLWR +E
Sbjct: 230 LGRPNLFPIADIGIQNALKKLKGLDQKPTVLQMQEWAKDWEPYLSYASLYLWRSIE 285
>gi|345888588|ref|ZP_08839663.1| hypothetical protein HMPREF0178_02437 [Bilophila sp. 4_1_30]
gi|345040544|gb|EGW44789.1| hypothetical protein HMPREF0178_02437 [Bilophila sp. 4_1_30]
Length = 403
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 103/190 (54%), Gaps = 4/190 (2%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A+ L+ D++L +I+ P F AL S++ QQ++ +A +I R L G
Sbjct: 202 ALDALKRRDKRLGRVIERLGPIRRGVEPDLFTALVDSVIAQQISGRAAQTISDRLHGLVG 261
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
P+ + P Q++Q G+S RK Y+ +AR+ +G L A+ + D+ L L
Sbjct: 262 N---FTPQGLAEAEPSQIQQCGLSQRKVGYIQGIAREVASGALDLEALRHAPDEELIREL 318
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRP 310
+ +NGIG W+ M MIFSL RPDVL DLG+R+G+ LLY + + ++ +++ P
Sbjct: 319 SALNGIGVWTAEMLMIFSLCRPDVLSWGDLGIRRGMALLYG-DRELTRERFERRRKRYSP 377
Query: 311 YRSVASWYLW 320
Y SV S YLW
Sbjct: 378 YGSVVSLYLW 387
>gi|24212981|ref|NP_710462.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Leptospira interrogans serovar Lai str. 56601]
gi|45656143|ref|YP_000229.1| 3-methyladenine DNA glycosylase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|386072718|ref|YP_005987035.1| 3-methyladenine DNA glycosylase [Leptospira interrogans serovar Lai
str. IPAV]
gi|417762054|ref|ZP_12410049.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. 2002000624]
gi|417771888|ref|ZP_12419780.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Pomona str. Pomona]
gi|417774556|ref|ZP_12422420.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. 2002000621]
gi|417784843|ref|ZP_12432548.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. C10069]
gi|418668475|ref|ZP_13229877.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Pyrogenes str. 2006006960]
gi|418674481|ref|ZP_13235784.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. 2002000623]
gi|418683722|ref|ZP_13244917.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Pomona str. Kennewicki LC82-25]
gi|418689281|ref|ZP_13250403.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. FPW2026]
gi|418707665|ref|ZP_13268485.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Grippotyphosa str. UI 08368]
gi|418713073|ref|ZP_13273800.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. UI 08452]
gi|418727020|ref|ZP_13285619.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. UI 12621]
gi|421087506|ref|ZP_15548342.1| base excision DNA repair protein, HhH-GPD family [Leptospira
santarosai str. HAI1594]
gi|421104457|ref|ZP_15565052.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Icterohaemorrhagiae str. Verdun LP]
gi|421114467|ref|ZP_15574885.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Canicola str. Fiocruz LV133]
gi|421122996|ref|ZP_15583278.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. Brem 329]
gi|421124694|ref|ZP_15584951.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Grippotyphosa str. 2006006986]
gi|421133663|ref|ZP_15593809.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Grippotyphosa str. Andaman]
gi|24193660|gb|AAN47480.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Leptospira interrogans serovar Lai str. 56601]
gi|45599376|gb|AAS68866.1| 3-methyladenine DNA glycosylase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|353456507|gb|AER01052.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Leptospira interrogans serovar Lai str. IPAV]
gi|400324471|gb|EJO76765.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Pomona str. Kennewicki LC82-25]
gi|400361426|gb|EJP17392.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. FPW2026]
gi|409942108|gb|EKN87730.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. 2002000624]
gi|409946301|gb|EKN96313.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Pomona str. Pomona]
gi|409951632|gb|EKO06146.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. C10069]
gi|409959767|gb|EKO23533.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. UI 12621]
gi|410014038|gb|EKO72111.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Canicola str. Fiocruz LV133]
gi|410022108|gb|EKO88887.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Grippotyphosa str. Andaman]
gi|410343740|gb|EKO94935.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. Brem 329]
gi|410365909|gb|EKP21302.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Icterohaemorrhagiae str. Verdun LP]
gi|410429755|gb|EKP74130.1| base excision DNA repair protein, HhH-GPD family [Leptospira
santarosai str. HAI1594]
gi|410437825|gb|EKP86924.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Grippotyphosa str. 2006006986]
gi|410575398|gb|EKQ38416.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. 2002000621]
gi|410578464|gb|EKQ46322.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. 2002000623]
gi|410755984|gb|EKR17612.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Pyrogenes str. 2006006960]
gi|410772086|gb|EKR47280.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Grippotyphosa str. UI 08368]
gi|410790156|gb|EKR83850.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. UI 08452]
gi|455667220|gb|EMF32552.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Pomona str. Fox 32256]
gi|455791771|gb|EMF43568.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Lora str. TE 1992]
gi|456824144|gb|EMF72581.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Canicola str. LT1962]
gi|456968956|gb|EMG10053.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Grippotyphosa str. LT2186]
Length = 228
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 1/196 (0%)
Query: 125 EGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTR 184
E ++ A LR D LID + TP+ L +S+L QQL+ K + R
Sbjct: 24 EVRLKKASSWLRKKDPITKKLIDSIGLCKLKTIGTPYQVLIKSVLGQQLSVKVALTFERR 83
Query: 185 FIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDK 244
I+L G + PE +L + ++R+IGVS K + +A Y ++DS + ++D
Sbjct: 84 LISLVGSKKIPSPEQILKIPNDEMRKIGVSQAKTETIKRIAEAYLKRSITDSKLHKLEDS 143
Query: 245 SLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQL 304
+ +L + G+G W+ M +IF+L R D INDL +RK V+ Y + + ++
Sbjct: 144 DVLKLLCSIKGVGPWTAEMVLIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIQLF 202
Query: 305 CEKWRPYRSVASWYLW 320
+ PYR++ SWYLW
Sbjct: 203 LNTYSPYRTILSWYLW 218
>gi|315056675|ref|XP_003177712.1| DNA-3-methyladenine glycosylase [Arthroderma gypseum CBS 118893]
gi|311339558|gb|EFQ98760.1| DNA-3-methyladenine glycosylase [Arthroderma gypseum CBS 118893]
Length = 396
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 110/240 (45%), Gaps = 42/240 (17%)
Query: 125 EGEVEAAIRHLRNADRQLASLIDIHP-----PPTFDSFHTPFLALTRSILYQQLAFKAGT 179
E ++ AI HL + D +L +ID P P PF AL I+ QQ++ A
Sbjct: 147 ENLLKEAIAHLLSVDARLKPVIDKFPDAPFRPADLAVEIDPFQALVSGIIGQQVSGAAAK 206
Query: 180 SIYTRFIALCG-----------------GEAGV--------VPETVLALTPQQLRQIGVS 214
SI +FI+L G+AG+ P+ V++L LR G+S
Sbjct: 207 SIKNKFISLFSATTEQAGAEAEDGEDEVGDAGLRYRPVPFPSPQQVVSLDLPTLRTAGLS 266
Query: 215 GRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDV 274
RKA Y+H LA K+ +G LS ++ D+ + L V G+G WSV MF+ F L R DV
Sbjct: 267 QRKAEYIHGLAEKFVSGELSARMLLTASDEEVLEKLIAVRGLGKWSVEMFLFFGLKRMDV 326
Query: 275 LPINDLGVRKGVQLLYSLE------------ELPRPSQMDQLCEKWRPYRSVASWYLWRF 322
DLGV++G+ + + M ++ + PYRS+ WY+WR+
Sbjct: 327 FSTGDLGVQRGMAAFAGRDVGKLKAKGGGKFKYMSEKDMVEIAAPFSPYRSLFMWYMWRW 386
>gi|66046595|ref|YP_236436.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae pv.
syringae B728a]
gi|63257302|gb|AAY38398.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae pv.
syringae B728a]
Length = 221
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 112/202 (55%), Gaps = 3/202 (1%)
Query: 123 SSEGEVEAAIRHLRNADRQLASLIDIHPPPT--FDSFHTPFLALTRSILYQQLAFKAGTS 180
S++ E A+ LR+ D Q +LID+ P + PF AL ++ YQQL +AG +
Sbjct: 7 STDREHAEAVAALRSLDPQWQALIDLVGPCLHPVSAAQDPFQALVEAVAYQQLHARAGDA 66
Query: 181 IYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSD-SAIV 239
+ R +L + ++ L Q LR G S K + +A +G++ + SA +
Sbjct: 67 MVMRLRSLFPEVSFPSAPALVELDDQALRSCGFSAAKCRAIKAIAAARLDGLVPEVSAAL 126
Query: 240 NMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPS 299
M +++L L + G+G W+V M +I+ L + DV+P +D GV +G + LY+L+ P
Sbjct: 127 AMGNEALVERLIQLPGVGRWTVEMMLIYGLGQLDVMPASDFGVCEGYRRLYALQLKPSHR 186
Query: 300 QMDQLCEKWRPYRSVASWYLWR 321
QM +L E++ PYR++A+WYLWR
Sbjct: 187 QMARLAERFAPYRTIAAWYLWR 208
>gi|317484700|ref|ZP_07943601.1| HhH-GPD superfamily base excision DNA repair protein [Bilophila
wadsworthia 3_1_6]
gi|316924056|gb|EFV45241.1| HhH-GPD superfamily base excision DNA repair protein [Bilophila
wadsworthia 3_1_6]
Length = 403
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 103/190 (54%), Gaps = 4/190 (2%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A+ L+ D++L +I+ P F AL S++ QQ++ +A +I R L G
Sbjct: 202 ALDALKRRDKRLGRVIERLGPIRRGVEPDLFTALVDSVIAQQISGRAAQTISDRLHVLVG 261
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
P+ + P Q++Q G+S RK Y+ +AR+ +G L A+ + D+ L L
Sbjct: 262 N---FTPQGLAEADPSQIQQCGLSQRKVGYIQGIAREVASGALDLEALRHAPDEELIRKL 318
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRP 310
+ +NGIG W+ M MIFSL RPDVL DLG+R+G+ LLY + + ++ +++ P
Sbjct: 319 SALNGIGVWTAEMLMIFSLCRPDVLSWGDLGIRRGMALLYG-DRELTRERFERRRKRYSP 377
Query: 311 YRSVASWYLW 320
Y SV S YLW
Sbjct: 378 YGSVVSLYLW 387
>gi|345856597|ref|ZP_08809074.1| hhH-GPD superbase excision DNA repair family protein
[Desulfosporosinus sp. OT]
gi|344330353|gb|EGW41654.1| hhH-GPD superbase excision DNA repair family protein
[Desulfosporosinus sp. OT]
Length = 208
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 107/189 (56%), Gaps = 4/189 (2%)
Query: 132 IRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGG 191
I HL+ D++LA ID + PF AL S++ QQ++ KA +++ R LC
Sbjct: 19 IDHLKRKDKKLAVAIDKIGIIKREITPDPFRALISSVVSQQISNKAAATVWNR---LCTL 75
Query: 192 EAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLT 251
+ PE++ ++ +++ G+S RKA Y+ +A GI+ ++ + D+ + L+
Sbjct: 76 LEDITPESIAQVSLPEIQACGMSERKAGYIKGIANAANLGIVDFKSLHTLTDEEIIKKLS 135
Query: 252 MVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPY 311
++G+G W+ M +IFS RPDV+ DL + +G+ LY L+EL + + ++ +++ PY
Sbjct: 136 SLHGVGVWTAEMLLIFSFCRPDVVSYKDLAICRGMMNLYGLKELSK-EKFERYRKRYTPY 194
Query: 312 RSVASWYLW 320
+VAS YLW
Sbjct: 195 GTVASLYLW 203
>gi|418705109|ref|ZP_13265974.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Hebdomadis str. R499]
gi|410764960|gb|EKR35662.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Hebdomadis str. R499]
Length = 228
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 1/196 (0%)
Query: 125 EGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTR 184
E ++ A LR D LID + TP+ L +S+L QQL+ K + R
Sbjct: 24 EVRLKKASSWLRKKDPITKKLIDSIGLCKLKTIGTPYQVLIKSVLGQQLSVKVALTFERR 83
Query: 185 FIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDK 244
I+L G + PE +L + ++R+IGVS K + +A Y ++DS + ++D
Sbjct: 84 LISLVGSKKIPSPEQILKIPNDEMRKIGVSQAKTETIKRIAEAYLKRSITDSKLHKLEDS 143
Query: 245 SLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQL 304
+ +L + G+G W+ M +IF+L R D INDL +RK V+ Y + + ++
Sbjct: 144 DVLKLLCSIKGVGPWTAEMVLIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIQLF 202
Query: 305 CEKWRPYRSVASWYLW 320
+ PYR++ SWYLW
Sbjct: 203 LNTYSPYRTILSWYLW 218
>gi|315647225|ref|ZP_07900338.1| DNA-3-methyladenine glycosidase [Paenibacillus vortex V453]
gi|315277427|gb|EFU40756.1| DNA-3-methyladenine glycosidase [Paenibacillus vortex V453]
Length = 223
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 93/165 (56%), Gaps = 3/165 (1%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASY 220
F +TR+++ QQL+ KA +I+ R +CG + + +LA + LR G+S K Y
Sbjct: 46 FTYITRTLVGQQLSIKAARTIFLRVEQVCGT---ITADAILAAAEESLRSAGLSRNKLGY 102
Query: 221 LHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDL 280
+ + A + + G L ++ ++DD + LT+V GIG W+ MF+IF L R DVL D
Sbjct: 103 IRNAAEQTKLGALHFPSLADLDDDEVVRQLTLVKGIGRWTAEMFLIFHLGRQDVLSFGDH 162
Query: 281 GVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEA 325
G+++ + LY+ E S + + +W+PY ++AS YLW + A
Sbjct: 163 GLKRASEWLYAAEASEGRSPLHRKQAEWKPYSTIASLYLWEAINA 207
>gi|421100623|ref|ZP_15561246.1| base excision DNA repair protein, HhH-GPD family [Leptospira
borgpetersenii str. 200901122]
gi|410796426|gb|EKR98562.1| base excision DNA repair protein, HhH-GPD family [Leptospira
borgpetersenii str. 200901122]
Length = 228
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 97/193 (50%), Gaps = 1/193 (0%)
Query: 128 VEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIA 187
++ A LR D LID P + P+ L +S+L QQL+ K + R I+
Sbjct: 27 LQKASNWLRKKDSTTKKLIDSIGPCKLQTIGNPYQVLIKSVLGQQLSVKVALTFERRLIS 86
Query: 188 LCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLF 247
L G + P +L + +L++IGVS K + +A Y N ++DS + ++D +
Sbjct: 87 LAGSKKIPSPNQILMIPNGKLKKIGVSQAKTETIKRIAEAYLNRDITDSKLRKLEDSDVL 146
Query: 248 TMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEK 307
+L G+G W+ M +IF+L R D INDL +RK V+ Y + + ++
Sbjct: 147 NLLCSFKGVGPWTAEMVLIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIQHFLMS 205
Query: 308 WRPYRSVASWYLW 320
+ P+R++ SWYLW
Sbjct: 206 YSPFRTILSWYLW 218
>gi|422631151|ref|ZP_16696341.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae pv. pisi
str. 1704B]
gi|330940826|gb|EGH43798.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 280
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 115/210 (54%), Gaps = 14/210 (6%)
Query: 123 SSEGEVEAAIRHLRNADRQLASLIDIHPPPTF---DSFHTPFLALTRSILYQQLAFKAGT 179
S++ E A LR+ D Q SLID H P + PF AL +++ YQQL +AG
Sbjct: 61 SADREHAEACAALRSIDVQWQSLID-HVGPCLHPVSAAQDPFQALVKAVAYQQLHARAGD 119
Query: 180 SIYTRFIALCGGEAGVVPET-------VLALTPQQLRQIGVSGRKASYLHDLARKYQNGI 232
++ R AL ++ +PE ++ L Q LR G S K + +A +G+
Sbjct: 120 AMVRRLRALFLDDS--LPEVSFPGAQALVELDDQALRSCGFSASKCRAIKAIAAARLDGL 177
Query: 233 LSD-SAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYS 291
+ + SA + M +++L L + G+G W+V M +I+ L + DV P +D GV +G + LY+
Sbjct: 178 VPEVSAALAMGNEALVERLIQLPGVGRWTVEMMLIYGLGQLDVTPASDFGVCEGYRRLYA 237
Query: 292 LEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
L+ P QM +L E++ PYR++A+WYLWR
Sbjct: 238 LQLRPSHRQMARLAERFAPYRTIAAWYLWR 267
>gi|418698329|ref|ZP_13259306.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Bataviae str. L1111]
gi|418732079|ref|ZP_13290155.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. UI 12758]
gi|410762472|gb|EKR28633.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Bataviae str. L1111]
gi|410773479|gb|EKR53506.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans str. UI 12758]
Length = 228
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 1/196 (0%)
Query: 125 EGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTR 184
E ++ A LR D LID + TP+ L +S+L QQL+ K + R
Sbjct: 24 EIRLKKASSWLRKKDPITKKLIDSIGLCKLKTIGTPYQVLIKSVLGQQLSVKVALTFERR 83
Query: 185 FIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDK 244
I+L G + PE +L + ++R+IGVS K + +A Y ++DS + ++D
Sbjct: 84 LISLVGSKKIPSPEQILKIPNDEMRKIGVSQAKTETIKRIAEAYLKRSITDSKLHKLEDS 143
Query: 245 SLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQL 304
+ +L + G+G W+ M +IF+L R D INDL +RK V+ Y + + ++
Sbjct: 144 DVLKLLCSIKGVGPWTAEMVLIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIQLF 202
Query: 305 CEKWRPYRSVASWYLW 320
+ PYR++ SWYLW
Sbjct: 203 LNTYSPYRTILSWYLW 218
>gi|392397318|ref|YP_006433919.1| 3-methyladenine DNA glycosylase [Flexibacter litoralis DSM 6794]
gi|390528396|gb|AFM04126.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Flexibacter litoralis DSM 6794]
Length = 237
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 98/165 (59%), Gaps = 9/165 (5%)
Query: 163 ALTRSILYQQLAFKAGTSIYTRFIALCGG---EAGVVPETVLALTPQQLRQIGVSGRKAS 219
+L ++I+ QQL+ KA +IY RF+ L G A V+ ET + + L+ +G+S +K +
Sbjct: 70 SLIKAIVSQQLSVKAADTIYKRFLGLFDGVSPNATVLLETDI----ETLKSVGLSKQKIT 125
Query: 220 YLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIND 279
Y+ ++A Q +S I ++ + LT + G+G W+V M ++F+L RPDV P+ D
Sbjct: 126 YIREVALFAQKNDISIEFINQKSNEEVIEYLTQIKGVGRWTVEMLLMFTLWRPDVFPVAD 185
Query: 280 LGVRKGVQLLYSLEELPRP--SQMDQLCEKWRPYRSVASWYLWRF 322
LG+++ +Q L EE + +M EKW+PYR+ A+ YLW++
Sbjct: 186 LGIQQAIQKLLKTEEKGKELIKRMIIYSEKWKPYRTFAAMYLWKW 230
>gi|288957477|ref|YP_003447818.1| DNA glycosylase [Azospirillum sp. B510]
gi|288909785|dbj|BAI71274.1| DNA glycosylase [Azospirillum sp. B510]
Length = 208
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 97/190 (51%), Gaps = 3/190 (1%)
Query: 132 IRHLRNADRQLASLIDIHPPPTFDSFH-TPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
I +L D A + + P D T F+ L R ++ QQL+ K +++ + G
Sbjct: 3 IAYLAALDPIFAECLRVGGPVIRDFVRPTGFVGLLRMVMEQQLSTKVALALWAKLQERVG 62
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
G V PE +LAL + LR G S +K Y LA G+L I ++ D+ L
Sbjct: 63 GP--VTPEAILALDDEALRACGFSRQKIGYARGLAEAAAGGLLDFDIIHDLPDEEAIARL 120
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRP 310
+ GIG WS ++++ +L RPD+ P+ DL ++ GVQ L + P Q+ ++ E WRP
Sbjct: 121 VALKGIGRWSAEVYLMAALDRPDIWPVGDLAIQLGVQRLKGWADRPTAKQLIEVAEPWRP 180
Query: 311 YRSVASWYLW 320
YRS+A+ +W
Sbjct: 181 YRSLAARLVW 190
>gi|15790351|ref|NP_280175.1| 3-methyladenine DNA glycosylase [Halobacterium sp. NRC-1]
gi|169236084|ref|YP_001689284.1| DNA-3-methyladenine glycosidase I [Halobacterium salinarum R1]
gi|10580829|gb|AAG19655.1| 3-methyladenine DNA glycosylase [Halobacterium sp. NRC-1]
gi|167727150|emb|CAP13936.1| DNA N-glycosylase [Halobacterium salinarum R1]
Length = 191
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 94/183 (51%), Gaps = 6/183 (3%)
Query: 139 DRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPE 198
D LA L+D H F L +I+ QQL+ A +I R V P
Sbjct: 11 DPTLAPLLDAHGELAVTPHDDLFERLVVAIIRQQLSTDAAATIRERVF----DAVDVTPA 66
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
+ A P LR G+S +K Y+ ++A ++ + + + D ++ LT + G+G
Sbjct: 67 GIAAADPAVLRDAGLSRQKTDYVTNVAAAFREHDYTRARFAELSDAAVREELTAITGVGD 126
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+ MF++F+L R DV P+ DLG+R G+Q LY + ++M ++ + WRPYRS AS Y
Sbjct: 127 WTASMFLLFALGRADVFPVGDLGIRTGMQALYGAD--TTRAEMREIADSWRPYRSYASLY 184
Query: 319 LWR 321
+WR
Sbjct: 185 VWR 187
>gi|299533877|ref|ZP_07047244.1| HhH-GPD [Comamonas testosteroni S44]
gi|298718161|gb|EFI59151.1| HhH-GPD [Comamonas testosteroni S44]
Length = 274
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 13/202 (6%)
Query: 131 AIRHLRNADRQLASLI------DIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTR 184
A R L DR L LI + P +F T L SI+ QQ++ K+ +++ +
Sbjct: 77 ACRQLMRRDRVLKRLIPQLGSQALLPCGQEQAFAT----LAWSIIGQQISAKSAKTLWNK 132
Query: 185 FIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDK 244
F+ L A + PE VL L +R +G+S RK YL DLA + L M D+
Sbjct: 133 FVRL---PAAMQPEQVLRLKVDDMRAVGLSARKVDYLVDLALHFTENRLHMDEWAQMSDE 189
Query: 245 SLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQL 304
+ L + G+ W+ F+I+ L RP+VLP++D G+ +G+ L + + S ++
Sbjct: 190 VIIAELMSIRGLSRWTAENFLIYCLGRPNVLPLDDAGLIQGISLNHFSGDPVSRSDAREV 249
Query: 305 CEKWRPYRSVASWYLWRFVEAK 326
E W+P+ +VA+WY+WR +EA+
Sbjct: 250 AEAWKPWCTVATWYIWRSLEAQ 271
>gi|386713185|ref|YP_006179508.1| DNA-3-methyladenine glycosylase YfjP [Halobacillus halophilus DSM
2266]
gi|384072741|emb|CCG44231.1| DNA-3-methyladenine glycosylase YfjP [Halobacillus halophilus DSM
2266]
Length = 288
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 118/232 (50%), Gaps = 27/232 (11%)
Query: 119 ARP---LSSEGE--VEAAIRHL-------RNADR--------QLASLIDIHP-PPTFDSF 157
ARP +SSE E +EA I+H+ RN + LA L +P P F
Sbjct: 58 ARPSFSISSEDEDAIEALIQHVQYLFQWDRNLENVQSHFLNTNLADLFSAYPGTPIVKDF 117
Query: 158 HTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIG 212
H + L + I++QQL K ++ TRF+ G + V PETV + ++LR++
Sbjct: 118 HL-YDCLVKVIIHQQLNMKFAHTLSTRFVERLGYQKDGVWFYPEPETVAEVPYEELRKLQ 176
Query: 213 VSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRP 272
S RKA Y+ D +RK G L + D+ + L + GIG W+ +++F + R
Sbjct: 177 FSQRKAEYVIDASRKIVEGELDLEWLARQADEEVMKHLVKIRGIGPWTAENWLMFGVGRE 236
Query: 273 DVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
++LP D+G++ ++ ++LE+ P QM+ E W PY+S AS LWR +E
Sbjct: 237 NLLPKADIGIQNALKSYFNLEDKPSKEQMESFSESWPPYQSYASLTLWRSIE 288
>gi|399048287|ref|ZP_10739905.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Brevibacillus sp. CF112]
gi|398053733|gb|EJL45893.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Brevibacillus sp. CF112]
Length = 326
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 115/229 (50%), Gaps = 26/229 (11%)
Query: 123 SSEGEVEAAIRHLRNADR-------------QLASLIDIHPPPTFDSFHTPFLALTRSIL 169
+ + E+E IRH+ +AD +LA L+D F ++ ++I+
Sbjct: 92 AEQRELERTIRHVFSADLDLLPIYEQMREEPELAVLVDRFSGLRLMHDSDLFQSMVKTII 151
Query: 170 YQQLAFKAGTSIYTRFIALCGGEA----GV------VPETVLALTPQQLRQIGVSGRKAS 219
QQ+ ++ R + L G E GV E V L+ + LR + S RKA
Sbjct: 152 GQQINLTFAANLTQRLLTLAGEEVADEQGVKFLAFPTAEAVARLSTEDLRPLQFSQRKAE 211
Query: 220 YLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIND 279
Y+ D AR +G + + M+D+ + LT + GIG W+V ++F + RP++LP D
Sbjct: 212 YIIDYARAIVDGKVDLERLWAMEDEEIIAHLTPLRGIGRWTVECLLMFGMGRPNLLPAAD 271
Query: 280 LGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAKGA 328
+G+R G+ L+Y ++ P ++ ++ E+W P+RS+ S Y+W EA GA
Sbjct: 272 IGLRNGIALVYKMDNKPDEREIRRIGERWAPWRSIYSLYIW---EAVGA 317
>gi|410460244|ref|ZP_11313927.1| HhH-GPD family protein [Bacillus azotoformans LMG 9581]
gi|409927474|gb|EKN64610.1| HhH-GPD family protein [Bacillus azotoformans LMG 9581]
Length = 289
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 99/199 (49%), Gaps = 11/199 (5%)
Query: 133 RHLRNADRQLASLIDIH--PPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
RH + D L L H P D PF L + I++QQL ++ RF+ G
Sbjct: 95 RHFQQTD--LRDLFQEHFGTPLVLD--FDPFSCLVKCIIHQQLNLSFSHTLTERFVKTFG 150
Query: 191 GEAGVV-----PETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKS 245
E V PE V +T +QLR + S RK Y+ + L A+ ++
Sbjct: 151 NEIDGVWFYPNPEIVANITVEQLRDMQFSSRKGEYVIGIGIAVAERDLEFEALARKSEEE 210
Query: 246 LFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLC 305
+F L + GIG+W++ F++F+L RP++ P D+G++ ++ LY L+ P +++Q
Sbjct: 211 IFNELIKIRGIGAWTIQNFLLFALGRPNLFPATDIGIQNALKKLYRLDRKPTLEEIEQYK 270
Query: 306 EKWRPYRSVASWYLWRFVE 324
+W PY S A+ YLWR +E
Sbjct: 271 HRWEPYLSYAALYLWRSIE 289
>gi|418530404|ref|ZP_13096327.1| HhH-GPD [Comamonas testosteroni ATCC 11996]
gi|371452123|gb|EHN65152.1| HhH-GPD [Comamonas testosteroni ATCC 11996]
Length = 274
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 107/203 (52%), Gaps = 15/203 (7%)
Query: 131 AIRHLRNADRQLASLI------DIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTR 184
A R L DR L LI + P +F T L RSI+ QQ++ K+ +++ +
Sbjct: 77 ACRQLMRRDRVLKRLIPQLGSQALQPCGQEQAFAT----LARSIIGQQISAKSAKTLWNK 132
Query: 185 FIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDK 244
F L A + PE VL L +R G+S RK YL DLA + L M D+
Sbjct: 133 FARL---PAAMQPEQVLRLKVDDMRGAGLSARKVDYLVDLALHFTEHRLHMDEWAQMSDE 189
Query: 245 SLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQL-LYSLEELPRPSQMDQ 303
+ L + G+ W+ F+I+ L RP+VLP++D G+ +G+ L +S + + R S +
Sbjct: 190 VIIAELMSIRGLSRWTAENFLIYCLGRPNVLPLDDAGLIQGISLNHFSGDPVSR-SDARE 248
Query: 304 LCEKWRPYRSVASWYLWRFVEAK 326
+ E W+P+ +VA+WY+WR +EA+
Sbjct: 249 VAEAWKPWCTVATWYIWRSLEAQ 271
>gi|328858480|gb|EGG07592.1| hypothetical protein MELLADRAFT_43085 [Melampsora larici-populina
98AG31]
Length = 362
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 99/187 (52%), Gaps = 18/187 (9%)
Query: 123 SSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFH-----TPFLALTRSILYQQLAFKA 177
SS ++E A HL DR+ L + P F+S PF +L +SIL QQ+++ A
Sbjct: 72 SSPFDLEDAKSHLIKVDRRFKLLFESLPCKPFESSQLNAKPEPFQSLCKSILGQQVSWLA 131
Query: 178 GTSIYTRFIALCGGE-------------AGVVPETVLALTPQQLRQIGVSGRKASYLHDL 224
SI +F+ L E + P V + ++LR G S RKA YL DL
Sbjct: 132 ARSITHKFVRLFFPELPEKADDLDPSDSSFPTPSQVSTCSMERLRSAGASQRKAEYLLDL 191
Query: 225 ARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRK 284
+ ++ NG LS ++ M+ + L V GIG W+V MF+IF++ P++LP++DLG++K
Sbjct: 192 SNRFVNGQLSSEKLLAMNPDEIMEELCAVRGIGRWTVEMFLIFTVKHPNILPVSDLGIQK 251
Query: 285 GVQLLYS 291
G+ Y+
Sbjct: 252 GLLRWYT 258
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 298 PSQMDQLCEKWRPYRSVASWYLWRFVEAKGAPS 330
P +M++L E W+P+RS+A WYLW +A APS
Sbjct: 330 PKEMEELTEPWKPFRSIAIWYLWSLTDASAAPS 362
>gi|414342198|ref|YP_006983719.1| DNA-3-methyladenine glycosylase [Gluconobacter oxydans H24]
gi|411027533|gb|AFW00788.1| DNA-3-methyladenine glycosylase [Gluconobacter oxydans H24]
Length = 216
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 93/177 (52%), Gaps = 9/177 (5%)
Query: 155 DSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGV------VPETVLALTPQQL 208
D P+ AL R+I QQL A I+ R L G A VPE +LA + L
Sbjct: 30 DDGQEPYDALLRAIAGQQLHGAAARRIFGRLCLL--GHASSEDGPPPVPEALLAFPEETL 87
Query: 209 RQIGVSGRKASYLHDLARKYQNGIL-SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIF 267
R G+S K + + +A+ G++ + +DD+ L L + G+G W+V M ++F
Sbjct: 88 RACGLSASKQAAMRGVAQARLEGLVPTRLEAERLDDEDLIQRLITLRGVGRWTVEMILMF 147
Query: 268 SLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
+L RPDV+P++D GVR+G + + L+ PRP + ++ P+RS +WY WR E
Sbjct: 148 TLGRPDVMPVDDFGVREGWRRIKRLDTAPRPKDLKTETLRFSPHRSALAWYCWRVAE 204
>gi|417768102|ref|ZP_12416037.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Bulgarica str. Mallika]
gi|400349547|gb|EJP01840.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Bulgarica str. Mallika]
Length = 228
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 99/196 (50%), Gaps = 1/196 (0%)
Query: 125 EGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTR 184
E ++ A LR D LID + TP+ L +S+L QQL+ K + R
Sbjct: 24 EVRLKKASSWLRKKDPITKKLIDSIGLCKLKTIGTPYQVLIKSVLGQQLSVKVALTFERR 83
Query: 185 FIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDK 244
I+L G + PE +L + ++R+IGVS K + +A Y ++DS + ++D
Sbjct: 84 LISLVGSKKIPSPEQILKIPNDEMRKIGVSQAKTETIKRIAEAYLKRSITDSKLHKLEDS 143
Query: 245 SLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQL 304
+ +L + G+G W+ M +IF+L R D INDL +RK V+ Y + + ++
Sbjct: 144 DVLKLLCSIKGMGPWTAEMVLIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIQLF 202
Query: 305 CEKWRPYRSVASWYLW 320
+ PYR++ SWYLW
Sbjct: 203 LNTYSPYRTILSWYLW 218
>gi|451347874|ref|YP_007446505.1| DNA-3-methyladenine glycosylase II [Bacillus amyloliquefaciens
IT-45]
gi|449851632|gb|AGF28624.1| DNA-3-methyladenine glycosylase II [Bacillus amyloliquefaciens
IT-45]
Length = 287
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 95/167 (56%), Gaps = 5/167 (2%)
Query: 163 ALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSGRK 217
L + I++QQL ++ RF+ G + V P+T+ AL Q+LR++ S RK
Sbjct: 121 CLMKCIIHQQLNLSFAFTLTERFVHAFGEQKDGVWCYPEPKTIAALEYQELRELQFSMRK 180
Query: 218 ASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPI 277
A Y D++R +G L+ + + ++ D+ + L + GIG W+V ++F L RP++ P+
Sbjct: 181 AEYAIDISRMIADGALNLAELTHLSDEDIMKKLITIRGIGPWTVQNVLMFGLGRPNLFPL 240
Query: 278 NDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
D+G++ ++ ++LE+ P M Q+ +W PY S AS YLWR +E
Sbjct: 241 ADIGLQNAIKRRFALEDKPSKDVMLQVSSEWAPYLSYASLYLWRSIE 287
>gi|311067289|ref|YP_003972212.1| DNA-modified purine glycosidase [Bacillus atrophaeus 1942]
gi|310867806|gb|ADP31281.1| putative DNA-modified purine glycosidase [Bacillus atrophaeus 1942]
Length = 330
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 142/307 (46%), Gaps = 31/307 (10%)
Query: 40 TETANNATITHANVTPQTSSPPSKIPLRPRKIRKLSPD--NGVD-QASSSQPTESSKATS 96
TE N + H + +PP R + +LS D N VD +A + + ++A
Sbjct: 33 TEQKNGKRVDHMWKEKVSVTPPYHFD---RVLDRLSLDPLNAVDIKARNVRVPIRNRAGD 89
Query: 97 AKSTKSRAI------------QQQQQTLTVPRIIARPLSSEGEVEAAIRHLRNADRQLAS 144
K +A+ + Q+ + + I R E ++ + H L++
Sbjct: 90 VCIVKVQALGHADEPEFLVSGETDQEDMMME--IKRIFQWENDLRHVLDHFSKT--SLSA 145
Query: 145 LIDIHP--PPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----P 197
+ + H P D ++ + + + I++QQL ++ RF+ G + V P
Sbjct: 146 IFEEHAGTPLVLD--YSVYNCIMKCIVHQQLNLSFAYTLTERFVHTFGEQKDGVWCYPKP 203
Query: 198 ETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIG 257
ET+ AL Q LR + S RKA Y D +R GIL S + + D+ + L + GIG
Sbjct: 204 ETIAALDYQDLRDLQFSMRKAEYAIDTSRMIAEGILDLSELAQLTDEEIMKKLIKIRGIG 263
Query: 258 SWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASW 317
W+V ++F L RP++ P+ D+G++ ++ ++L++ P M + ++W PY S AS
Sbjct: 264 PWTVQNVLMFGLGRPNLFPLADIGLQNAIKRHFALDDKPAKDVMLAMSKEWEPYLSYASL 323
Query: 318 YLWRFVE 324
YLWR +E
Sbjct: 324 YLWRSIE 330
>gi|453328879|dbj|GAC88878.1| DNA-3-methyladenine glycosylase [Gluconobacter thailandicus NBRC
3255]
Length = 216
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 92/172 (53%), Gaps = 9/172 (5%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGV------VPETVLALTPQQLRQIGV 213
P+ AL R+I QQL A I+ R L G A VPE +LA + LR G+
Sbjct: 35 PYDALLRAIAGQQLHGAAARRIFGRLCLL--GHASSEDGPPPVPEALLAFPEETLRACGL 92
Query: 214 SGRKASYLHDLARKYQNGIL-SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRP 272
S K + + +A+ G++ + +DD+ L L + G+G W+V M ++F+L RP
Sbjct: 93 SASKQAAMRGVAQARLEGLVPTRLEAERLDDEDLIQRLITLRGVGRWTVEMILMFTLGRP 152
Query: 273 DVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
DV+P++D GVR+G + + LE PRP + ++ P+RS +WY WR E
Sbjct: 153 DVMPVDDFGVREGWRRIKRLETAPRPKDLKTETLRFSPHRSALAWYCWRVAE 204
>gi|255527407|ref|ZP_05394281.1| HhH-GPD family protein [Clostridium carboxidivorans P7]
gi|296184948|ref|ZP_06853359.1| base excision DNA repair protein, HhH-GPD family [Clostridium
carboxidivorans P7]
gi|255508898|gb|EET85264.1| HhH-GPD family protein [Clostridium carboxidivorans P7]
gi|296050730|gb|EFG90153.1| base excision DNA repair protein, HhH-GPD family [Clostridium
carboxidivorans P7]
Length = 200
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 106/189 (56%), Gaps = 4/189 (2%)
Query: 132 IRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGG 191
I +L+ D++L + ID + PF AL +I+ QQ++ KA +++ R LC
Sbjct: 11 IEYLKRKDKRLGAAIDKIGMIKREIIADPFTALVSNIVGQQISSKAAETVWNR---LCNL 67
Query: 192 EAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLT 251
+ PE++ + +++ G++ RKA Y+ +A +G ++ + + + D + L+
Sbjct: 68 LGNITPESIAKASLSEIQGCGMTLRKAGYIKGIADVDISGEVNFNTLYTLTDIEVIKKLS 127
Query: 252 MVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPY 311
+NG+G W+ M +IFSL RPDV DL +RKG+ LY L+EL + + + +++ PY
Sbjct: 128 SLNGVGVWTAEMVLIFSLCRPDVASYGDLAIRKGMMNLYGLKELTKE-KFYKYKKRYSPY 186
Query: 312 RSVASWYLW 320
S+AS YLW
Sbjct: 187 GSIASLYLW 195
>gi|310796874|gb|EFQ32335.1| HhH-GPD superfamily base excision DNA repair protein [Glomerella
graminicola M1.001]
Length = 368
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 102/219 (46%), Gaps = 22/219 (10%)
Query: 128 VEAAIRHLRNADRQLASLID-----IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIY 182
+E A RHL D ++ LI+ + P PF +L I+ QQ++ A SI
Sbjct: 143 LEEACRHLIKVDPRMKPLIEKNHCRVFSPEGLADKVDPFESLCSGIISQQVSGAAARSIK 202
Query: 183 TRFIALCG---GEAGVVPE--TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSA 237
+F+AL GE P V A ++LR G+S RKA Y+ LA K+ +G LS
Sbjct: 203 NKFVALFTEREGEPKTFPHPSEVAAAPIERLRTAGLSQRKAEYIKGLAEKFSSGELSAQM 262
Query: 238 IVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLE---- 293
+ + + L V G+G WSV MF F L R DV + DLGV++G+ +
Sbjct: 263 LAEAPYEEVRDKLIAVRGLGLWSVEMFACFGLKRMDVFSLGDLGVQRGMAAFAGRDVAKL 322
Query: 294 --------ELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
+ M ++ K+ PYRSV WY+WR E
Sbjct: 323 KAKGGGKWKYMSEKDMTEMASKFVPYRSVFMWYMWRVEE 361
>gi|448410117|ref|ZP_21575066.1| DNA N-glycosylase / DNA lyase [Halosimplex carlsbadense 2-9-1]
gi|445672397|gb|ELZ24973.1| DNA N-glycosylase / DNA lyase [Halosimplex carlsbadense 2-9-1]
Length = 192
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 94/187 (50%), Gaps = 6/187 (3%)
Query: 138 ADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVP 197
AD L ++D H + + F L S++ QQ++ A +I R V P
Sbjct: 11 ADEVLGPVVDEHGAVSIEPADDCFERLVVSLIRQQVSMDAAAAIRERLFEAVE----VTP 66
Query: 198 ETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIG 257
E ++ L + G+S KA Y A + + D ++ LT ++GIG
Sbjct: 67 EAIVEADYATLHEAGLSEAKADYAKSAASAFLTREWDRDTFADTSDDAVRAELTDIHGIG 126
Query: 258 SWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASW 317
W+ MF++F+L R DV P+ DLG+RKG+ L+ E+ R ++M E+WRPYRS AS
Sbjct: 127 PWTADMFLMFALGREDVFPVGDLGIRKGMDRLFDA-EMTR-AEMTDAAERWRPYRSYASC 184
Query: 318 YLWRFVE 324
YLWR VE
Sbjct: 185 YLWRAVE 191
>gi|317127542|ref|YP_004093824.1| HhH-GPD family protein [Bacillus cellulosilyticus DSM 2522]
gi|315472490|gb|ADU29093.1| HhH-GPD family protein [Bacillus cellulosilyticus DSM 2522]
Length = 288
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 104/190 (54%), Gaps = 7/190 (3%)
Query: 141 QLASLI-DIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG-GEAGV--- 195
+LA+L ++ P F T + L ++I++QQL + RFI G + GV
Sbjct: 99 ELAALFQELRGTPFVCDF-TLYGCLMKTIIHQQLNMTFAYELTKRFITTYGFKKKGVWFY 157
Query: 196 -VPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVN 254
+ V +L+ +LR++ S RKA Y+ D ++ G L+ A+ N D+ + L +
Sbjct: 158 PTADRVASLSVAELRELQFSQRKAEYVIDTSKLIAEGNLNLEALKNFSDEEVMDKLVRIR 217
Query: 255 GIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSV 314
GIG W+ F++F L R D+ P+ D+G++ G++ Y L++ P +M ++ W+PYR+
Sbjct: 218 GIGRWTAECFLMFGLGRLDLFPVQDIGIQNGIKKYYQLDKKPEKEKMLEMSSHWKPYRTY 277
Query: 315 ASWYLWRFVE 324
AS YLW ++E
Sbjct: 278 ASLYLWDYLE 287
>gi|418719777|ref|ZP_13278976.1| base excision DNA repair protein, HhH-GPD family [Leptospira
borgpetersenii str. UI 09149]
gi|418737460|ref|ZP_13293857.1| base excision DNA repair protein, HhH-GPD family [Leptospira
borgpetersenii serovar Castellonis str. 200801910]
gi|421093715|ref|ZP_15554439.1| base excision DNA repair protein, HhH-GPD family [Leptospira
borgpetersenii str. 200801926]
gi|410363698|gb|EKP14727.1| base excision DNA repair protein, HhH-GPD family [Leptospira
borgpetersenii str. 200801926]
gi|410743820|gb|EKQ92562.1| base excision DNA repair protein, HhH-GPD family [Leptospira
borgpetersenii str. UI 09149]
gi|410746654|gb|EKQ99560.1| base excision DNA repair protein, HhH-GPD family [Leptospira
borgpetersenii serovar Castellonis str. 200801910]
gi|456891392|gb|EMG02112.1| base excision DNA repair protein, HhH-GPD family [Leptospira
borgpetersenii str. 200701203]
Length = 228
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 99/193 (51%), Gaps = 1/193 (0%)
Query: 128 VEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIA 187
++ A LR D L+D P + P+ L +S+L QQL+ K + R I+
Sbjct: 27 LQKASDWLRKKDPITKKLVDSIGPCKLQTIGNPYQVLIKSVLGQQLSVKVALTFERRLIS 86
Query: 188 LCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLF 247
L G + P+ +L + ++L++IGVS K + +A Y N ++DS + ++D +
Sbjct: 87 LAGSKKIPSPDQILMIPNEELKKIGVSRAKIETIKRIAEAYLNRDITDSKLRKLEDSDVL 146
Query: 248 TMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEK 307
+L G+G W+ M +IF+L R D INDL +RK V+ Y + + ++
Sbjct: 147 NLLCSFKGVGPWTAEMVLIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIQHFLMS 205
Query: 308 WRPYRSVASWYLW 320
+ P+R++ SWYLW
Sbjct: 206 YSPFRTILSWYLW 218
>gi|209695169|ref|YP_002263098.1| DNA repair protein [Aliivibrio salmonicida LFI1238]
gi|208009121|emb|CAQ79358.1| DNA repair protein [Aliivibrio salmonicida LFI1238]
Length = 202
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 101/198 (51%), Gaps = 3/198 (1%)
Query: 125 EGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTR 184
E +E ++ L D+ L + + P+ F A I+ QQL+ K I R
Sbjct: 3 EQTIEQGLKALCLIDKDLEAAVKTQGYPSPRVNPHGFEAFLSIIVSQQLSTKVAAVIMGR 62
Query: 185 FIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDK 244
+AL V PE +L++ Q LR +G+S RK Y LA Q+G L + ++ D+
Sbjct: 63 LVALL---KEVTPERLLSIEEQNLRDVGLSWRKIEYAKGLALAVQSGNLDIDGLESLSDE 119
Query: 245 SLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQL 304
+ +T + G G WS ++++FSL R D+ P +DLGV + L L + P P Q ++
Sbjct: 120 DAISAITSLKGFGRWSAEIYLMFSLGRQDIFPADDLGVLIALGRLKGLTDKPTPKQAREM 179
Query: 305 CEKWRPYRSVASWYLWRF 322
W+P+RSV S +LW++
Sbjct: 180 VGHWQPWRSVGSLFLWQY 197
>gi|197285098|ref|YP_002150970.1| base excision DNA repair protein [Proteus mirabilis HI4320]
gi|227355524|ref|ZP_03839919.1| base excision DNA repair protein [Proteus mirabilis ATCC 29906]
gi|194682585|emb|CAR42639.1| probable base excision DNA repair protein [Proteus mirabilis
HI4320]
gi|227164320|gb|EEI49209.1| base excision DNA repair protein [Proteus mirabilis ATCC 29906]
Length = 203
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 109/196 (55%), Gaps = 11/196 (5%)
Query: 129 EAAIRHLRNADRQLASLID----IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTR 184
E I L+ D++LA++++ I P T D F AL ++I+ QQ++ A T++ R
Sbjct: 7 EKEISFLKQKDKRLAAVMERIGEIKRPLTPD----LFTALIKNIIEQQISVAAATTVQQR 62
Query: 185 FIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDK 244
+ LC G P + +L+ Q ++Q G++ RKA Y+ +A N L I M DK
Sbjct: 63 LLTLCDGI--YTPVHIASLSVQDIQQCGMTMRKAGYIKGIADSVINHTLDLDQIPAMSDK 120
Query: 245 SLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQL 304
++ L + GIG W+ M +I SL+RPD+L DL +++G+ LY + L R ++ ++
Sbjct: 121 AVINTLIKLKGIGIWTAEMLLISSLNRPDILSWGDLAIQRGIMRLYRHQSLDR-TRFERY 179
Query: 305 CEKWRPYRSVASWYLW 320
+++ PY S AS YLW
Sbjct: 180 RKRYSPYGSTASLYLW 195
>gi|387897306|ref|YP_006327602.1| nucleoside deoxyribosyltransferase [Bacillus amyloliquefaciens Y2]
gi|387171416|gb|AFJ60877.1| nucleoside deoxyribosyltransferase [Bacillus amyloliquefaciens Y2]
Length = 310
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 94/167 (56%), Gaps = 5/167 (2%)
Query: 163 ALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSGRK 217
L + I++QQL ++ RF+ G + V P+T+ AL Q LR++ S RK
Sbjct: 144 CLMKCIIHQQLNLSFAFTLTERFVHAFGEQKDGVWCYPEPKTIAALDYQDLRKLQFSMRK 203
Query: 218 ASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPI 277
A Y D++R +G L+ + + ++ D+ + L + GIG W+V ++F L RP++ P+
Sbjct: 204 AEYAIDISRMIADGALNLAELTHLSDEGIMKKLITIRGIGPWTVQNVLMFGLGRPNLFPL 263
Query: 278 NDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
D+G++ V+ ++LE+ P M Q+ +W PY S AS YLWR +E
Sbjct: 264 ADIGLQNAVKRRFALEDKPSKDVMLQVSSEWAPYLSYASLYLWRSIE 310
>gi|385263920|ref|ZP_10042007.1| HhH-GPD superfamily base excision DNA repair protein [Bacillus sp.
5B6]
gi|385148416|gb|EIF12353.1| HhH-GPD superfamily base excision DNA repair protein [Bacillus sp.
5B6]
Length = 310
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 95/167 (56%), Gaps = 5/167 (2%)
Query: 163 ALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSGRK 217
L + I++QQL ++ RF+ G + V P+T+ AL Q LR++ S RK
Sbjct: 144 CLMKCIIHQQLNLSFAFTLTERFVHAFGEQKDGVWCYPEPKTIAALDYQDLRELQFSMRK 203
Query: 218 ASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPI 277
A Y D++R +G L+ + + ++ D+++ L + GIG W+V ++F L RP++ P+
Sbjct: 204 AEYAIDISRMIADGALNLAELSHLSDEAIMKKLITIRGIGPWTVQNVLMFGLGRPNLFPL 263
Query: 278 NDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
D+G++ V+ ++LE+ P M Q+ +W PY S AS YLWR +E
Sbjct: 264 ADIGLQNAVKRRFALEDKPSKDVMLQVSSEWAPYLSYASLYLWRSIE 310
>gi|374724550|gb|EHR76630.1| DNA-3-methyladenine glycosylase II [uncultured marine group II
euryarchaeote]
Length = 203
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 101/194 (52%), Gaps = 8/194 (4%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A HL D L ++ +P + F L RSI+ QQ++ A +++ R G
Sbjct: 12 ATEHLAK-DELLGPVLAQYPDGSLLGRGDLFCTLVRSIVGQQISVLAADAVWGRLETFLG 70
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
V P T+ P++L G+S KASY+H LA + + + D + MDD ++
Sbjct: 71 E---VKPATIREKQPEELAACGLSRSKASYIHGLAEQSEALLSPDWS--AMDDNAIHAHF 125
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRP 310
T GIG W+ M IF+L RPDV I D+G+ K VQ+L E + + ++ E+W P
Sbjct: 126 TSFRGIGPWTSEMVCIFALLRPDVFSIGDIGLIKAVQILDPSAE--SKADVVRVAERWSP 183
Query: 311 YRSVASWYLWRFVE 324
YR+ ASWYLWR ++
Sbjct: 184 YRTAASWYLWRMLD 197
>gi|375361484|ref|YP_005129523.1| DNA-3-methyladenine glycosylase II [Bacillus amyloliquefaciens
subsp. plantarum CAU B946]
gi|371567478|emb|CCF04328.1| DNA-3-methyladenine glycosylase II [Bacillus amyloliquefaciens
subsp. plantarum CAU B946]
Length = 287
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 94/167 (56%), Gaps = 5/167 (2%)
Query: 163 ALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSGRK 217
L + I++QQL ++ RF+ G + V P+T+ AL Q LR++ S RK
Sbjct: 121 CLMKCIIHQQLNLSFAFTLTERFVHAFGEQKDGVWCYPEPKTIAALDYQDLRELQFSMRK 180
Query: 218 ASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPI 277
A Y D++R +G L+ + + ++ D+ + L + GIG W+V ++F L RP++ P+
Sbjct: 181 AEYAIDISRMIADGALNLAELTHLSDEDIMKKLITIRGIGPWTVQNVLMFGLGRPNLFPL 240
Query: 278 NDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
D+G++ ++ ++LE+ P M Q+ +W PY S AS YLWR +E
Sbjct: 241 ADIGLQNAIKRRFALEDKPSKDVMLQVSSEWAPYLSYASLYLWRSIE 287
>gi|46137149|ref|XP_390266.1| hypothetical protein FG10090.1 [Gibberella zeae PH-1]
Length = 358
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 20/217 (9%)
Query: 128 VEAAIRHLRNADRQLASLIDIH-----PPPTFDSFHTPFLALTRSILYQQLAFKAGTSIY 182
++ A +L D ++ LI+ H P PF +L+ SI+ QQ++ A SI
Sbjct: 134 LKEACDYLIKVDARMKPLIENHHCRAFSPEGLAEEIDPFESLSSSIIGQQVSGAAAKSIK 193
Query: 183 TRFIALCGGEAGVV---PETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIV 239
+F+ L + G P V + ++LR G+S RKA Y+ LA K+ +G LS +
Sbjct: 194 GKFLTLFELQPGSRFPHPSQVAIKSIEELRTAGLSQRKAEYIKGLAEKFDSGELSTQMLH 253
Query: 240 NMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPS 299
+ D+ + L V G+G WSV MF F+L R DV + DLGV++G+ + +
Sbjct: 254 DASDEEVMEKLIAVRGLGKWSVEMFACFALKRMDVFSLGDLGVQRGMAAFVGRDVAKLKA 313
Query: 300 Q------------MDQLCEKWRPYRSVASWYLWRFVE 324
+ M +L K+ PYRS+ WY+WR E
Sbjct: 314 KGGGKWKYMSEQDMIELSNKFSPYRSLFMWYMWRVEE 350
>gi|384264376|ref|YP_005420083.1| DNA-3-methyladenine glycosylase II [Bacillus amyloliquefaciens
subsp. plantarum YAU B9601-Y2]
gi|380497729|emb|CCG48767.1| DNA-3-methyladenine glycosylase II [Bacillus amyloliquefaciens
subsp. plantarum YAU B9601-Y2]
Length = 287
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 94/167 (56%), Gaps = 5/167 (2%)
Query: 163 ALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSGRK 217
L + I++QQL ++ RF+ G + V P+T+ AL Q LR++ S RK
Sbjct: 121 CLMKCIIHQQLNLSFAFTLTERFVHAFGEQKDGVWCYPEPKTIAALDYQDLRKLQFSMRK 180
Query: 218 ASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPI 277
A Y D++R +G L+ + + ++ D+ + L + GIG W+V ++F L RP++ P+
Sbjct: 181 AEYAIDISRMIADGALNLAELTHLSDEGIMKKLITIRGIGPWTVQNVLMFGLGRPNLFPL 240
Query: 278 NDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
D+G++ V+ ++LE+ P M Q+ +W PY S AS YLWR +E
Sbjct: 241 ADIGLQNAVKRRFALEDKPSKDVMLQVSSEWAPYLSYASLYLWRSIE 287
>gi|323141170|ref|ZP_08076071.1| base excision DNA repair protein, HhH-GPD family
[Phascolarctobacterium succinatutens YIT 12067]
gi|322414313|gb|EFY05131.1| base excision DNA repair protein, HhH-GPD family
[Phascolarctobacterium succinatutens YIT 12067]
Length = 210
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 99/191 (51%), Gaps = 4/191 (2%)
Query: 133 RHLRNADRQLASLIDIHPPPTFD--SFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
R+LR +LA L+D + P S F L I+ QQL + + L G
Sbjct: 14 RYLRENVPELAPLVDRYSPCPLKPKSKEVYFTILLTGIIAQQLPPDVSQQLMKKLEGLTG 73
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
+ P+ VLA + + L IG+ +K YL A NG ++ +M D + L
Sbjct: 74 NP--ITPQAVLAASAEDLLSIGLVKQKIDYLRSFAEAVINGSVTMDKFDDMTDGQITKQL 131
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRP 310
+ G+G W++ MF++ +L R DV+P +D +K +Q + +L E+P+ +++ L E WRP
Sbjct: 132 MQIRGLGQWTIEMFLLLALCRTDVVPSSDFIFKKELQKMLNLSEIPKRGKINTLTETWRP 191
Query: 311 YRSVASWYLWR 321
+RS+A WY+W+
Sbjct: 192 WRSLAVWYIWQ 202
>gi|213405197|ref|XP_002173370.1| DNA-3-methyladenine glycosylase [Schizosaccharomyces japonicus
yFS275]
gi|212001417|gb|EEB07077.1| DNA-3-methyladenine glycosylase [Schizosaccharomyces japonicus
yFS275]
Length = 224
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 91/163 (55%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P+ L ++ YQ+L+ AG +I R ++ + +L+L + LR G S RK
Sbjct: 50 PYEGLIHALTYQRLSDSAGDAILGRLCQHFHKKSFPSVQELLSLDTEDLRSFGFSHRKGE 109
Query: 220 YLHDLARKYQNGIL-SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +LA +G L S I +M + + T V GIG+W+V + IF+L RP+V+P
Sbjct: 110 TILELANMAADGSLPSREEISHMPLDKMIGIFTKVKGIGAWTVEKYAIFTLGRPNVMPTM 169
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D +R+ VQLLY L+ P +M++ + PY++VASWYLWR
Sbjct: 170 DREIRENVQLLYHLDHTPTDVEMEERSRAYVPYKTVASWYLWR 212
>gi|402082598|gb|EJT77616.1| hypothetical protein GGTG_02722 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 479
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 111/240 (46%), Gaps = 43/240 (17%)
Query: 128 VEAAIRHLRNADRQLASLIDIH-----PPPTFDSFHTPFLALTRSILYQQLAFKAGTSIY 182
++ A +L D ++ SL++ H P PF +L I+ QQ++ A SI
Sbjct: 233 LDEACAYLVRVDARMRSLVEAHHCHIFSPEGLAEEIDPFESLCSGIISQQVSGAAARSIK 292
Query: 183 TRFIAL-------------CGGEAGVV------------PETVLALTPQQLRQIGVSGRK 217
+F+AL GG+ P V A + ++LR G+S RK
Sbjct: 293 AKFVALFSPPPSPPSPPPHSGGDDDDTATTTEPPRRFPQPSQVAAASLERLRTAGLSQRK 352
Query: 218 ASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPI 277
A Y+ LA K+ +G LS +A+ + + LT V G+G WSV MF F+L R DV +
Sbjct: 353 AEYVQGLAAKFASGELSAAALADAPYDEVVARLTAVRGLGQWSVEMFACFALKRMDVFSL 412
Query: 278 NDLGVRKGVQLLYSLE-------------ELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
DLGV++G+ + + + M +L ++++PYRS+ WY+WR E
Sbjct: 413 GDLGVQRGMAAFVGRDVAKLKAAGKGGKWKYMNEADMRELSDRFKPYRSLFMWYMWRVEE 472
>gi|421732514|ref|ZP_16171635.1| DNA-3-methyladenine glycosylase II [Bacillus amyloliquefaciens
subsp. plantarum M27]
gi|407073643|gb|EKE46635.1| DNA-3-methyladenine glycosylase II [Bacillus amyloliquefaciens
subsp. plantarum M27]
Length = 287
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 94/167 (56%), Gaps = 5/167 (2%)
Query: 163 ALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSGRK 217
L + I++QQL ++ RF+ G + V P+T+ AL Q LR++ S RK
Sbjct: 121 CLMKCIIHQQLNLSFAFTLTERFVHAFGEQKDGVWCYPEPKTIAALEYQDLRELQFSMRK 180
Query: 218 ASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPI 277
A Y D++R +G L+ + + ++ D+ + L + GIG W+V ++F L RP++ P+
Sbjct: 181 AEYAIDISRMIADGALNLAELTHLSDEDIMKKLITIRGIGPWTVQNVLMFGLGRPNLFPL 240
Query: 278 NDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
D+G++ ++ ++LE+ P M Q+ +W PY S AS YLWR +E
Sbjct: 241 ADIGLQNAIKRRFALEDKPSKDVMLQVSSEWAPYLSYASLYLWRSIE 287
>gi|400754503|ref|YP_006562871.1| DNA repair protein [Phaeobacter gallaeciensis 2.10]
gi|398653656|gb|AFO87626.1| putative DNA repair protein [Phaeobacter gallaeciensis 2.10]
Length = 222
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 110/206 (53%), Gaps = 10/206 (4%)
Query: 118 IARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKA 177
+ R ++S+ V L + D + A+ ID+ P F L +I+ QQ++ +
Sbjct: 15 VGRIITSDACVSEGAAWLADQDARFAAAIDLCGPLPLRRKPEGFAELLSAIVSQQVSVAS 74
Query: 178 GTSIYTRFIALCGGEAGVVPET-VLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDS 236
+I+ R + EAG+ T V A + LR +G+S +K Y H LA GI D
Sbjct: 75 ANAIWGRMV-----EAGLDTATAVAAASEDDLRGVGLSRQKIRYAHALA---AAGIDFD- 125
Query: 237 AIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELP 296
A+ + D + +LT V+GIG+W+ ++ +FSL R DV DL +++G ++L L E P
Sbjct: 126 ALRQLPDSEVIAILTQVSGIGTWTAEIYAMFSLGRADVFAHGDLALQEGARILLDLPERP 185
Query: 297 RPSQMDQLCEKWRPYRSVASWYLWRF 322
+P+ M ++ E W P+RSVA+ LW +
Sbjct: 186 KPAAMRRIAEAWSPWRSVAARVLWAY 211
>gi|374620282|ref|ZP_09692816.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [gamma
proteobacterium HIMB55]
gi|374303509|gb|EHQ57693.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [gamma
proteobacterium HIMB55]
Length = 208
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 89/166 (53%), Gaps = 2/166 (1%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASY 220
F L R ++ QQ++ A TSI + + G + VL + + LR G+S +K +Y
Sbjct: 43 FETLARIVVGQQVSVAAATSINKKLVDALEGR--LTATAVLDASEELLRSAGLSRQKVNY 100
Query: 221 LHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDL 280
+ LA G L + + D+ ++T + G G WS HM+++FSL RPD+ P+ DL
Sbjct: 101 IQSLATAEATGALVLDGLPELSDEDAVAVITNIKGFGEWSAHMYLMFSLGRPDIWPVGDL 160
Query: 281 GVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAK 326
VR+G + + LEE P ++ + + +RPYRS + WRF A+
Sbjct: 161 AVREGFKRIQGLEERPSAGKLKPMGDDFRPYRSALAMLCWRFCTAE 206
>gi|58261184|ref|XP_568002.1| DNA-3-methyladenine glycosidase [Cryptococcus neoformans var.
neoformans JEC21]
gi|134115807|ref|XP_773617.1| hypothetical protein CNBI2310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256243|gb|EAL18970.1| hypothetical protein CNBI2310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230084|gb|AAW46485.1| DNA-3-methyladenine glycosidase, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 461
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 97/180 (53%), Gaps = 6/180 (3%)
Query: 113 TVPRIIARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHT--PFLALTRSILY 170
TVP+ P + + +AI HL D + + + P F + PF L SI+
Sbjct: 80 TVPQPTLLPPTLNFNLPSAISHLSALDPRFSLFFEHLPCRPFVNLEAIDPFRTLVTSIIG 139
Query: 171 QQLAFKAGTSIYTRFIALCG----GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLAR 226
QQ+++ A +I TRF AL G E P+ VL L+ +G+SGRKA Y+ LA
Sbjct: 140 QQVSWMAARAINTRFRALFGFTHEKEGFPSPQMVLMQDVTSLKGVGLSGRKAEYVLSLAD 199
Query: 227 KYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV 286
+ +G LS + + D+ + L V GIG W+V MFMIFSL RPD+L + DLGV+KG+
Sbjct: 200 HFASGQLSTQLLQSGTDEEISKALIAVRGIGQWTVDMFMIFSLRRPDILAVGDLGVQKGL 259
>gi|297624911|ref|YP_003706345.1| HhH-GPD family protein [Truepera radiovictrix DSM 17093]
gi|297166091|gb|ADI15802.1| HhH-GPD family protein [Truepera radiovictrix DSM 17093]
Length = 208
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 103/198 (52%), Gaps = 11/198 (5%)
Query: 130 AAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALC 189
AA+ HL+ D +A+L+ P + P+ L R+I+ Q ++ A ++Y R A
Sbjct: 16 AALAHLQT-DPTMATLVARFGPYGW-RLGEPYRVLVRAIVGQLISGAAARAVYGRLQA-- 71
Query: 190 GGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTM 249
+ PE +L T L +GV RK YL +L+ Y + + D +
Sbjct: 72 --ATDLDPERLLTCTTDDLLALGVPRRKGEYLRELSAAYLG--GALEGLAGGSDADVLAR 127
Query: 250 LTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWR 309
LT + G+G W+ MF+IF+L RPDV P+ D+GV + + LY +P + +L ++
Sbjct: 128 LTALRGVGVWTAEMFLIFALGRPDVWPLKDMGVVRAGEGLYGAFGVP---ALSELGARFA 184
Query: 310 PYRSVASWYLWRFVEAKG 327
PYRS A WYLWR++EA G
Sbjct: 185 PYRSAAVWYLWRWIEAGG 202
>gi|116329013|ref|YP_798733.1| DNA-3-methyladenine glycosylase II [Leptospira borgpetersenii
serovar Hardjo-bovis str. L550]
gi|116330379|ref|YP_800097.1| DNA-3-methyladenine glycosylase II [Leptospira borgpetersenii
serovar Hardjo-bovis str. JB197]
gi|116121757|gb|ABJ79800.1| DNA-3-methyladenine glycosylase II [Leptospira borgpetersenii
serovar Hardjo-bovis str. L550]
gi|116124068|gb|ABJ75339.1| DNA-3-methyladenine glycosylase II [Leptospira borgpetersenii
serovar Hardjo-bovis str. JB197]
Length = 228
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 99/193 (51%), Gaps = 1/193 (0%)
Query: 128 VEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIA 187
++ A LR D L+D P + P+ L +S+L QQL+ K + R I+
Sbjct: 27 LQKASDWLRKKDPITKKLVDSIGPCKLQTIGNPYQVLIKSVLGQQLSVKVALTFERRLIS 86
Query: 188 LCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLF 247
L G + P+ +L + ++L++IGVS K + +A Y N ++DS + ++D +
Sbjct: 87 LAGSKKIPPPDRILMIPNEELKKIGVSQAKIETIQRIAEAYLNRDITDSKLRKLEDSDVL 146
Query: 248 TMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEK 307
+L G+G W+ M +IF+L R D INDL +RK V+ Y + + ++
Sbjct: 147 NLLCSFKGVGPWTAEMVLIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIQHFLMS 205
Query: 308 WRPYRSVASWYLW 320
+ P+R++ SWYLW
Sbjct: 206 YSPFRTILSWYLW 218
>gi|374993782|ref|YP_004969281.1| HhH-GPD superfamily base excision DNA repair protein
[Desulfosporosinus orientis DSM 765]
gi|357212148|gb|AET66766.1| HhH-GPD superfamily base excision DNA repair protein
[Desulfosporosinus orientis DSM 765]
Length = 199
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 112/193 (58%), Gaps = 12/193 (6%)
Query: 132 IRHLRNADRQLASLID----IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIA 187
I +L+ D++L + I+ I T D PF+A+ S++ QQ++ KA +++ R ++
Sbjct: 11 INYLKRKDKKLGAAIERIGMIERKITPD----PFIAIVSSVVSQQISNKAAETVWNRLLS 66
Query: 188 LCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLF 247
L + PE + + +++ G+S RKA Y+ +A +G + + + D+ +
Sbjct: 67 LL---ERITPENIAQMNVSKIQGCGMSERKAGYIKGIADAAISGSVDFKTLHTLSDQEII 123
Query: 248 TMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEK 307
+L+ ++G+G W+ M +IFSL RPDV+ DL + +G++ LY L+ELP+ + ++ ++
Sbjct: 124 DVLSSLHGVGVWTAEMILIFSLTRPDVVSYRDLAICRGMKNLYGLKELPKE-KFERYRKR 182
Query: 308 WRPYRSVASWYLW 320
+ PY +VAS YLW
Sbjct: 183 YSPYGTVASLYLW 195
>gi|308172665|ref|YP_003919370.1| DNA-modified purine glycosidase [Bacillus amyloliquefaciens DSM 7]
gi|384158337|ref|YP_005540410.1| DNA-modified purine glycosidase [Bacillus amyloliquefaciens TA208]
gi|307605529|emb|CBI41900.1| putative DNA-modified purine glycosidase [Bacillus
amyloliquefaciens DSM 7]
gi|328552425|gb|AEB22917.1| DNA-modified purine glycosidase [Bacillus amyloliquefaciens TA208]
Length = 287
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 93/167 (55%), Gaps = 5/167 (2%)
Query: 163 ALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSGRK 217
L + I++QQL ++ RF+ G + V P+T+ AL Q LR++ S RK
Sbjct: 121 CLMKCIIHQQLNLSFAFTLTERFVHAFGEQKDGVWCYPEPKTIAALEYQDLRELQFSMRK 180
Query: 218 ASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPI 277
A Y DL+R +G L+ + + + D+ + L + GIG W+V ++F L RP++ P+
Sbjct: 181 AEYAIDLSRMIADGALNLAELPQLSDEDIMKKLITIRGIGPWTVQNVLMFGLGRPNLFPL 240
Query: 278 NDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
D+G++ V+ ++LE+ P M Q+ +W PY S AS YLWR +E
Sbjct: 241 ADIGLQNAVKRRFALEDKPSKDLMLQVSREWAPYLSYASLYLWRSIE 287
>gi|342878011|gb|EGU79424.1| hypothetical protein FOXB_10100 [Fusarium oxysporum Fo5176]
Length = 351
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 105/222 (47%), Gaps = 20/222 (9%)
Query: 123 SSEGEVEAAIRHLRNADRQLASLIDIH-----PPPTFDSFHTPFLALTRSILYQQLAFKA 177
++E ++ A +L D ++ L++ H P PF L+ I+ QQ++ A
Sbjct: 123 TTENILKEACDYLVKVDPRMKPLVESHHCRVFSPEGLAEKIDPFENLSSGIISQQVSGAA 182
Query: 178 GTSIYTRFIALCGGEAGVV---PETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILS 234
SI +F+ L + G+ P V A + +LR G+S RKA Y+ LA K+ +G LS
Sbjct: 183 AKSIKAKFLTLFEEQPGIRFPHPSQVAAKSIDELRTAGLSQRKAEYIKGLAEKFVSGELS 242
Query: 235 DSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLE- 293
+ + D + L V G+G WSV MF F L R DV + DLGV++G+ +
Sbjct: 243 AQMLHDASDAEVMEKLIAVRGLGKWSVEMFACFGLKRMDVFSLGDLGVQRGMAAFVGRDI 302
Query: 294 -----------ELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
+ M +L ++ PYRS+ WY+WR E
Sbjct: 303 AKLKAKGGGKWKYMSEQDMTELSTRFSPYRSLFMWYMWRVEE 344
>gi|345563223|gb|EGX46226.1| hypothetical protein AOL_s00110g50 [Arthrobotrys oligospora ATCC
24927]
Length = 364
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 111/222 (50%), Gaps = 21/222 (9%)
Query: 124 SEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFH-----TPFLALTRSILYQQLAFKAG 178
E EV I HL + L+++I HP F + PF +L I+ QQ++ A
Sbjct: 128 GEEEVHPGITHLLTTNPSLSTIITRHPCTLFSASGLLEPVNPFHSLCSGIISQQVSSAAA 187
Query: 179 TSIYTRFIALCGGEAGVVPET-VLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSA 237
SI +RFIAL P + +L LR G+S RKA Y+ LA + +G L++
Sbjct: 188 ASIKSRFIALFNATNTFPPPSEILTKDIDTLRTAGLSQRKAEYITGLAELFVSGDLTNEL 247
Query: 238 IVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLE---- 293
++ D + L V G+G WS+ MF++F+L R DV DLG+++G+ +L +
Sbjct: 248 LLESPDDVVTEKLIKVRGLGLWSIQMFLLFALKRTDVFATGDLGIQRGMAILAGRDVNKL 307
Query: 294 ELPRPS-----------QMDQLCEKWRPYRSVASWYLWRFVE 324
+ +P +M +L E + PYRS+ SWYLWR +
Sbjct: 308 KFSKPGKAGKWKYMAEDEMIKLAEVYSPYRSLLSWYLWRLAD 349
>gi|384163220|ref|YP_005544599.1| DNA-modified purine glycosidase [Bacillus amyloliquefaciens LL3]
gi|384167388|ref|YP_005548766.1| DNA-modified purine glycosidase [Bacillus amyloliquefaciens XH7]
gi|328910775|gb|AEB62371.1| putative DNA-modified purine glycosidase [Bacillus
amyloliquefaciens LL3]
gi|341826667|gb|AEK87918.1| putative DNA-modified purine glycosidase [Bacillus
amyloliquefaciens XH7]
Length = 310
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 101/188 (53%), Gaps = 5/188 (2%)
Query: 142 LASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV----- 196
L++L + H + + L + I++QQL ++ RF+ G + V
Sbjct: 123 LSALFEEHAGTPLVLEYDVYNCLMKCIIHQQLNLSFAFTLTERFVHAFGEQKDGVWCYPE 182
Query: 197 PETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGI 256
P+T+ AL Q LR++ S RKA Y DL+R +G L+ + + + D+ + L + GI
Sbjct: 183 PKTIAALEYQDLRELQFSMRKAEYAIDLSRMIADGALNLAELPQLSDEDIMKKLITIRGI 242
Query: 257 GSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVAS 316
G W+V ++F L RP++ P+ D+G++ V+ ++LE+ P M Q+ +W PY S AS
Sbjct: 243 GPWTVQNVLMFGLGRPNLFPLADIGLQNAVKRRFALEDKPSKDLMLQVSREWAPYLSYAS 302
Query: 317 WYLWRFVE 324
YLWR +E
Sbjct: 303 LYLWRSIE 310
>gi|126656630|ref|ZP_01727844.1| HhH-GPD [Cyanothece sp. CCY0110]
gi|126621850|gb|EAZ92558.1| HhH-GPD [Cyanothece sp. CCY0110]
Length = 180
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 94/176 (53%), Gaps = 3/176 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+ A +L D LA+LI + T ++H PFL L +I+ QQ++ A T++ R +L
Sbjct: 8 QEAKEYLAKKDDILANLISSYSSETIINYHNPFLTLANAIIGQQISVSAATTVSQRLKSL 67
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
G + + L LR+ G+S RK SY+ ++A+ ++ IL+ M D+ +
Sbjct: 68 LGD---ITIKNYLEADEASLRKCGLSYRKISYITNIAQGFEQDILTPKTWSMMSDQEVIK 124
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQL 304
LT + GIG W+ MF+IF LHR D+ PI DLG+ +Q YS E Q+ +L
Sbjct: 125 QLTSIKGIGLWTAQMFLIFHLHRKDIFPIADLGLINAIQRHYSTENSLTKEQILEL 180
>gi|418744686|ref|ZP_13301035.1| base excision DNA repair protein, HhH-GPD family [Leptospira
santarosai str. CBC379]
gi|418754116|ref|ZP_13310350.1| base excision DNA repair protein, HhH-GPD family [Leptospira
santarosai str. MOR084]
gi|409965538|gb|EKO33401.1| base excision DNA repair protein, HhH-GPD family [Leptospira
santarosai str. MOR084]
gi|410794352|gb|EKR92258.1| base excision DNA repair protein, HhH-GPD family [Leptospira
santarosai str. CBC379]
Length = 226
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 96/191 (50%), Gaps = 1/191 (0%)
Query: 135 LRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAG 194
LR D LID P + TP+ L +S+L QQL+ K + R I+L G
Sbjct: 32 LRKKDSITKKLIDSVGPCKLRTIGTPYQVLIKSVLGQQLSVKVALTFERRLISLAGSRKI 91
Query: 195 VVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVN 254
P +L + +L++IGVS K + +A Y ++DS + ++D + +L
Sbjct: 92 PPPNRILTIPNGELKKIGVSQAKTETIKRIAEAYSIRNITDSKLRKLEDSDVLNLLCSFK 151
Query: 255 GIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSV 314
G+G W+ M +IF+L R D INDL +RK V+ Y + + ++ + + P+R++
Sbjct: 152 GVGPWTAEMVLIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIQRFLTGYSPFRTI 210
Query: 315 ASWYLWRFVEA 325
SWYLW V+
Sbjct: 211 LSWYLWADVDG 221
>gi|221068473|ref|ZP_03544578.1| HhH-GPD family protein [Comamonas testosteroni KF-1]
gi|220713496|gb|EED68864.1| HhH-GPD family protein [Comamonas testosteroni KF-1]
Length = 280
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 104/202 (51%), Gaps = 13/202 (6%)
Query: 131 AIRHLRNADRQLASLI------DIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTR 184
A R L DR L LI + P +F T L RSI+ QQ++ K+ +++ +
Sbjct: 83 ACRQLMRRDRVLKRLIPQLGSQALLPCGQEQAFAT----LARSIIGQQISAKSAKTLWNK 138
Query: 185 FIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDK 244
F L A + PE VL L +R G+S RK YL DLA + L M D+
Sbjct: 139 FAKL---PAAMQPEQVLRLKVDDMRGAGLSARKVDYLVDLALHFTEHRLHMDEWAQMSDE 195
Query: 245 SLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQL 304
+ L + G+ W+ F+I+ L RP+VLP++D G+ +G+ L + + S ++
Sbjct: 196 VIIAELMSIRGLSRWTAENFLIYCLGRPNVLPLDDAGLIQGISLNHFSGDPVSRSDAREV 255
Query: 305 CEKWRPYRSVASWYLWRFVEAK 326
E W+P+ +VA+WY+WR +EA+
Sbjct: 256 AEAWKPWCTVATWYIWRSLEAQ 277
>gi|422681813|ref|ZP_16740081.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
gi|331011155|gb|EGH91211.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
Length = 204
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 106/191 (55%), Gaps = 5/191 (2%)
Query: 135 LRNADRQLASLIDIHPPPTFD---SFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGG 191
L+ DR+ LI+ H P + PF AL +++ YQQL KAG ++ R AL
Sbjct: 2 LKAIDRRWELLIN-HVGPCLHPVTAAQDPFQALIKAVAYQQLHAKAGDAMVVRLRALFPD 60
Query: 192 EAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSD-SAIVNMDDKSLFTML 250
+ ++ L Q LR G S K + +A +G++ D SA + M +++L L
Sbjct: 61 ATFPAAQALIDLDEQTLRSCGFSASKCRAIKAIAAARVDGLVPDVSAALAMSNEALVERL 120
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRP 310
+ G+G W+V M +I+ L + DV+P +D GV +G + LY+LE P +M ++ E++ P
Sbjct: 121 IQLPGVGRWTVEMMLIYGLGQMDVMPASDYGVCEGYRRLYALELKPGHREMARIGERFGP 180
Query: 311 YRSVASWYLWR 321
YR++A+WYLWR
Sbjct: 181 YRTIAAWYLWR 191
>gi|425068049|ref|ZP_18471165.1| hypothetical protein HMPREF1311_01206 [Proteus mirabilis WGLW6]
gi|404600432|gb|EKB00867.1| hypothetical protein HMPREF1311_01206 [Proteus mirabilis WGLW6]
Length = 203
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 109/196 (55%), Gaps = 11/196 (5%)
Query: 129 EAAIRHLRNADRQLASLID----IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTR 184
E I L+ D++LA++++ I P T D F AL ++I+ QQ++ A T++ R
Sbjct: 7 EKEISFLKQKDKRLAAVMERIGEIKRPLTPD----LFTALIKNIIEQQISVAAATTVQQR 62
Query: 185 FIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDK 244
+ LC G P + +L+ Q ++Q G++ RKA Y+ +A N L I M D+
Sbjct: 63 LLTLCDGI--YTPVHIASLSEQDIQQCGMTMRKAGYIKGIADSVINHTLDLDQIPAMSDQ 120
Query: 245 SLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQL 304
++ L + GIG W+ M +I SL+RPD+L DL +++G+ LY + L R ++ ++
Sbjct: 121 AVINTLIKLKGIGIWTAEMLLISSLNRPDILSWGDLAIQRGIMRLYRHQSLDR-TRFERY 179
Query: 305 CEKWRPYRSVASWYLW 320
+++ PY S AS YLW
Sbjct: 180 RKRYSPYGSTASLYLW 195
>gi|434393336|ref|YP_007128283.1| HhH-GPD family protein [Gloeocapsa sp. PCC 7428]
gi|428265177|gb|AFZ31123.1| HhH-GPD family protein [Gloeocapsa sp. PCC 7428]
Length = 206
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 104/193 (53%), Gaps = 6/193 (3%)
Query: 131 AIRHLRNADRQLASLID-IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALC 189
A+ L DR LAS+++ PP ++ T F+ L R+I+ QQL+ + +I+TR L
Sbjct: 12 AVAELTQRDRDLASIVEKWGHPPNWER-ETGFVGLVRTIIGQQLSIASAKAIFTRLSQL- 69
Query: 190 GGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTM 249
+ P L L QL+ G+S RK Y +LAR ++ + +DD S+ +
Sbjct: 70 ---VPLTPANFLQLDDAQLQAAGLSQRKILYCRELARAIATNVIDLDELALLDDASVRSQ 126
Query: 250 LTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWR 309
L + GIG W+V ++++ L RPD P DL + Q L L + P P +++ + EKW+
Sbjct: 127 LRQIKGIGDWTVDIYLLMCLQRPDAFPSGDLALAIAYQKLKRLPKRPTPVELEAVSEKWK 186
Query: 310 PYRSVASWYLWRF 322
P+R+VA+ LW +
Sbjct: 187 PWRAVAARILWHY 199
>gi|422618019|ref|ZP_16686719.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae pv.
japonica str. M301072]
gi|330898399|gb|EGH29818.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae pv.
japonica str. M301072]
Length = 280
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 115/210 (54%), Gaps = 14/210 (6%)
Query: 123 SSEGEVEAAIRHLRNADRQLASLIDIHPPPTF---DSFHTPFLALTRSILYQQLAFKAGT 179
S++ E A+ LR+ D Q S I H P + PF AL +++ YQQL +AG
Sbjct: 61 SADREHAEAVAALRSIDVQWQSFI-YHVGPCLHPVSAAQDPFQALVKAVAYQQLHARAGD 119
Query: 180 SIYTRFIALCGGEAGVVPET-------VLALTPQQLRQIGVSGRKASYLHDLARKYQNGI 232
++ R AL ++ +PE ++ L Q LR G S K + +A +G+
Sbjct: 120 AMVGRLRALFLDDS--LPEVSFPGAQALVDLDDQALRSCGFSASKCRAIKAIAAARLDGL 177
Query: 233 LSD-SAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYS 291
+ + SA + M +++L L + G+G W+V M +I+ L + DV+P +D GV +G + LY+
Sbjct: 178 VPEVSAALAMGNEALVERLIQLPGVGRWTVEMMLIYGLGQLDVMPASDFGVCEGYRRLYA 237
Query: 292 LEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
L+ P QM +L E++ PYR++A+WYLWR
Sbjct: 238 LQLKPSHRQMARLAERFAPYRTIAAWYLWR 267
>gi|167759409|ref|ZP_02431536.1| hypothetical protein CLOSCI_01756 [Clostridium scindens ATCC 35704]
gi|336420916|ref|ZP_08601077.1| hypothetical protein HMPREF0993_00454 [Lachnospiraceae bacterium
5_1_57FAA]
gi|167662966|gb|EDS07096.1| base excision DNA repair protein, HhH-GPD family [Clostridium
scindens ATCC 35704]
gi|336003935|gb|EGN34011.1| hypothetical protein HMPREF0993_00454 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 203
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 103/195 (52%), Gaps = 16/195 (8%)
Query: 132 IRHLRNADRQLASLIDIHPPPTFDSFHTP-FLALTRSILYQQLAFKAGTSIYTRFIALCG 190
I +L+ D++L ID H + F ++ I+ QQ++ A +++ RF + G
Sbjct: 10 IEYLKRKDKKLGEAID-HIGHIYREVDADIFQSVVHQIIGQQISNAALATVWGRFRNMVG 68
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
V P+ VL ++L+ +G+S RKA Y+ + A K G L + MDD+ + L
Sbjct: 69 E---VTPQAVLKYQAEELKGLGMSFRKAEYIRNFAEKVCQGELDLEELCQMDDQKVIKTL 125
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQ-LCEKWR 309
+ + GIG W+ M +IF + RPDVL D + KG+Q+LY +MD+ L EK+R
Sbjct: 126 SSLRGIGVWTAEMLLIFCMQRPDVLSYGDGAILKGMQILY------HHRKMDKNLFEKYR 179
Query: 310 ----PYRSVASWYLW 320
PY SVAS YLW
Sbjct: 180 KRYSPYGSVASLYLW 194
>gi|442805735|ref|YP_007373884.1| HhH-GPD family protein [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442741585|gb|AGC69274.1| HhH-GPD family protein [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 200
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 100/192 (52%), Gaps = 4/192 (2%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
E +L+ D++L ID PF AL SI+ QQ+ KA +++ R +A
Sbjct: 7 EKETEYLKERDKKLGEAIDRIGFVKRRIIPDPFRALVYSIVGQQITGKAADTVFNRLVAR 66
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
G + PE + L +++ G+S RKA Y+ +A NG + + D+ +
Sbjct: 67 AGE---IAPERLAELDISEIKACGMSLRKAEYIRKIAEAAVNGTVDFGGLKAKPDREVID 123
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
+LT + G+G W+ M +IFSL RP+VL +D G+RKG+ L+ ++ L + + D+ +
Sbjct: 124 ILTTLPGVGIWTAEMLLIFSLARPNVLSFSDFGIRKGLMKLHGIDRLTK-EKFDEYRSLY 182
Query: 309 RPYRSVASWYLW 320
PY + AS YLW
Sbjct: 183 SPYCTTASIYLW 194
>gi|422596124|ref|ZP_16670408.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|330986425|gb|EGH84528.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 204
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 106/191 (55%), Gaps = 5/191 (2%)
Query: 135 LRNADRQLASLIDIHPPPTFD---SFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGG 191
L+ DR+ LI+ H P + PF AL +++ YQQL KAG ++ R AL
Sbjct: 2 LKAIDRRWELLIN-HVGPCLHPVTAAQDPFQALIKAVAYQQLHAKAGDAMVMRLRALFPD 60
Query: 192 EAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSD-SAIVNMDDKSLFTML 250
+ ++ L Q LR G S K + +A +G++ D SA + M +++L L
Sbjct: 61 ATFPAAQALIDLDEQTLRSCGFSASKCRAIKAIAAARVDGLVPDVSAALAMSNEALVERL 120
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRP 310
+ G+G W+V M +I+ L + DV+P +D GV +G + LY+LE P +M ++ E++ P
Sbjct: 121 IQLPGVGRWTVEMMLIYGLGQMDVMPASDYGVCEGYRRLYALELKPGHREMARMGERFGP 180
Query: 311 YRSVASWYLWR 321
YR++A+WYLWR
Sbjct: 181 YRTIAAWYLWR 191
>gi|350265070|ref|YP_004876377.1| hypothetical protein GYO_1067 [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|349597957|gb|AEP85745.1| YfjP [Bacillus subtilis subsp. spizizenii TU-B-10]
Length = 287
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 107/214 (50%), Gaps = 11/214 (5%)
Query: 118 IARPLSSEGEVEAAIRHLRNADRQLASLIDIHP--PPTFDSFHTPFLALTRSILYQQLAF 175
I R E +++ + H L+++ + H P D ++ + + + I++QQL
Sbjct: 78 IKRIFQWENDLQHVLDHFSKT--SLSAIFEAHAGTPLVLD--YSVYNCIMKCIIHQQLNL 133
Query: 176 KAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSGRKASYLHDLARKYQN 230
++ RF+ G + V PET+ L Q LR + S RKA Y D +R
Sbjct: 134 SFAYTLTERFVHAFGEQKDGVWCYPKPETIAELDYQDLRDLQFSMRKAEYTIDTSRMIAE 193
Query: 231 GILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLY 290
G L S + NM D+ + L + GIG W+V ++F L RP++ P+ D+G++ ++ +
Sbjct: 194 GTLDLSELPNMTDEDIMKKLIKIRGIGPWTVQNVLMFGLGRPNLFPLADIGLQNAIKRHF 253
Query: 291 SLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
L++ P M + ++W PY S AS YLWR +E
Sbjct: 254 QLDDKPAKDVMLAMSKEWEPYLSYASLYLWRSIE 287
>gi|238784724|ref|ZP_04628728.1| Methylated-DNA--protein-cysteine methyltransferase [Yersinia
bercovieri ATCC 43970]
gi|238714403|gb|EEQ06411.1| Methylated-DNA--protein-cysteine methyltransferase [Yersinia
bercovieri ATCC 43970]
Length = 201
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 108/201 (53%), Gaps = 14/201 (6%)
Query: 124 SEGEVEAAIRHLRNADRQLASLID----IHPPPTFDSFHTPFLALTRSILYQQLAFKAGT 179
S GE E I HL+ D+++A+ ID I P + D F AL R+I+ QQ++ KA
Sbjct: 4 SYGETE--INHLKRRDKKMAAAIDRLGMIARPLSPDLFA----ALIRNIVDQQISVKAAI 57
Query: 180 SIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIV 239
++ R +AL G + P TV + + ++ G++ +KA Y+ A +G L+ +AI
Sbjct: 58 TVNARLVALLGA---ITPITVAQASAETIQGCGMTMKKAGYIKGAAEAALDGSLNLAAIA 114
Query: 240 NMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPS 299
+ D + T L+ +NG+G W+ M +I SL RPDVL DL +R+G+ LY + +PR
Sbjct: 115 QLPDNEVITQLSSLNGVGVWTAEMLLISSLARPDVLSWGDLAIRRGMMNLYRHKTVPRER 174
Query: 300 QMDQLCEKWRPYRSVASWYLW 320
PY + AS YLW
Sbjct: 175 FERYRRRY-APYGTTASLYLW 194
>gi|301630359|ref|XP_002944289.1| PREDICTED: acetyl-coenzyme A carboxylase carboxyl transferase
subunit alpha-like, partial [Xenopus (Silurana)
tropicalis]
Length = 419
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 85/151 (56%), Gaps = 3/151 (1%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASY 220
F L RSI+ QQ++ KA +++ RF L A + PE+VL L +R G+S RK Y
Sbjct: 20 FGTLARSIVGQQISVKAAQTVWDRFALL---PANMEPESVLKLKVDDMRAAGLSARKVDY 76
Query: 221 LHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDL 280
L DLA + NG L MDD+++ L + G+G W+ MF+IF L RP+VLP++D+
Sbjct: 77 LVDLALHFANGKLHVQDWQGMDDETIIAELVAIRGVGRWTAEMFLIFHLMRPNVLPLDDV 136
Query: 281 GVRKGVQLLYSLEELPRPSQMDQLCEKWRPY 311
G+ G+ LY + S ++ W+P+
Sbjct: 137 GLINGISRLYFSGDPVSRSDAREVAAAWKPW 167
>gi|326479118|gb|EGE03128.1| DNA-3-methyladenine glycosylase [Trichophyton equinum CBS 127.97]
Length = 367
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 109/240 (45%), Gaps = 48/240 (20%)
Query: 131 AIRHLRNADRQLASLIDIHP-----PPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRF 185
AI HL + D +L +ID P P PF AL I+ QQ++ A SI ++F
Sbjct: 118 AIAHLLSVDPRLKPVIDKFPDAPFRPADLAVEIDPFQALVSGIIGQQVSGAAAKSIKSKF 177
Query: 186 IALCG-----------------------GEAGV--------VPETVLALTPQQLRQIGVS 214
I+L G+AG+ P+ V+++ LR G+S
Sbjct: 178 ISLFSATTTPIDTQAETEAGDGDGEDEVGDAGLRYKPVPFPSPQQVVSMDIPTLRTAGLS 237
Query: 215 GRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDV 274
RKA Y+H LA K+ +G LS ++ D+ + L V G+G WSV MF++F L R DV
Sbjct: 238 QRKAEYIHGLAEKFASGELSARMLLTASDEEVLDKLIAVRGLGKWSVEMFLLFGLKRMDV 297
Query: 275 LPINDLGVRKGVQLLYSLE------------ELPRPSQMDQLCEKWRPYRSVASWYLWRF 322
DLGV++G+ + + M ++ + PYRS+ WY+WR+
Sbjct: 298 FSTGDLGVQRGMAAFAGRDVSKLKAKGGGKFKYMSEKDMVEIAAPFSPYRSLFMWYMWRW 357
>gi|257484797|ref|ZP_05638838.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
gi|416027971|ref|ZP_11571145.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas syringae pv.
glycinea str. race 4]
gi|422404135|ref|ZP_16481190.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas syringae pv.
glycinea str. race 4]
gi|422605305|ref|ZP_16677319.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas syringae pv. mori
str. 301020]
gi|320328091|gb|EFW84096.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330875940|gb|EGH10089.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330888961|gb|EGH21622.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas syringae pv. mori
str. 301020]
Length = 204
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 106/191 (55%), Gaps = 5/191 (2%)
Query: 135 LRNADRQLASLIDIHPPPTFD---SFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGG 191
L+ DR+ LI+ H P + PF AL +++ YQQL KAG ++ R AL
Sbjct: 2 LKAIDRRWELLIN-HVGPCLHPVTAAQDPFQALIKAVAYQQLHAKAGDAMVMRLRALFPD 60
Query: 192 EAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSD-SAIVNMDDKSLFTML 250
+ ++ L Q LR G S K + +A +G++ D SA + M +++L L
Sbjct: 61 ATFPAAQALIDLDEQTLRSCGFSASKCRAIKAIAAARVDGLVPDVSAALAMSNEALVERL 120
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRP 310
+ G+G W+V M +I+ L + DV+P +D GV +G + LY+LE P +M ++ E++ P
Sbjct: 121 IQLPGVGRWTVEMMLIYGLGQMDVMPASDYGVCEGYRRLYALELKPGHREMARIGERFGP 180
Query: 311 YRSVASWYLWR 321
YR++A+WYLWR
Sbjct: 181 YRTIAAWYLWR 191
>gi|392425487|ref|YP_006466481.1| HhH-GPD superfamily base excision DNA repair protein
[Desulfosporosinus acidiphilus SJ4]
gi|391355450|gb|AFM41149.1| HhH-GPD superfamily base excision DNA repair protein
[Desulfosporosinus acidiphilus SJ4]
Length = 206
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 112/201 (55%), Gaps = 6/201 (2%)
Query: 120 RPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGT 179
+P+ G+ E I +L+ D++L ID + PF AL SI+ QQ++ KA
Sbjct: 8 KPIFVYGQKE--IDYLKRKDKKLGLAIDKIGFIRREIIPDPFTALISSIVSQQISNKAAE 65
Query: 180 SIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIV 239
+++ R +L + P ++ + +++ G+S RKA Y+ +A NG + I
Sbjct: 66 TVWMRLTSLI---PDLTPGSIARVPLSEIKACGMSERKAGYIKGIADSALNGAIDFQDIN 122
Query: 240 NMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPS 299
++ D + + LT + G+G W+ M +IFSL+R DVL DL + +G+ LY+L+ELP+ +
Sbjct: 123 SLSDLDIISKLTSLRGVGVWTAEMILIFSLNRLDVLSFKDLAICRGMMNLYNLKELPKET 182
Query: 300 QMDQLCEKWRPYRSVASWYLW 320
++ +++ PY SVAS YLW
Sbjct: 183 -FERYRKRYSPYGSVASLYLW 202
>gi|325284136|ref|YP_004256677.1| HhH-GPD family protein [Deinococcus proteolyticus MRP]
gi|324315945|gb|ADY27060.1| HhH-GPD family protein [Deinococcus proteolyticus MRP]
Length = 205
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 99/194 (51%), Gaps = 13/194 (6%)
Query: 129 EAAIRHLRNADRQLASLIDIHPP-PTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIA 187
AA+ HL D LA+LID + P PF L RS++ QQL+ KA SIY R
Sbjct: 9 RAALAHL-GRDPALAALIDQYGDLPVLAPVADPFARLIRSVVGQQLSVKAARSIYARLEE 67
Query: 188 LCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLF 247
G V +LA +P LR +G+S K + + D+AR G + + + D+ L
Sbjct: 68 RLGV---VDAAGLLATSPDDLRALGLSWAKVASVQDIARAAAEGQVDFAGLAGHTDEQLL 124
Query: 248 TMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQ-LCE 306
L + G+G W+ MFM+F+L PDV DL +RKG+Q Y P Q + +
Sbjct: 125 AELLPLRGVGRWTAEMFMMFALAHPDVFSFGDLALRKGLQRHY-------PGQDHAVVVQ 177
Query: 307 KWRPYRSVASWYLW 320
W PYR++A+ YLW
Sbjct: 178 GWSPYRTLAARYLW 191
>gi|300711140|ref|YP_003736954.1| HhH-GPD family protein [Halalkalicoccus jeotgali B3]
gi|299124823|gb|ADJ15162.1| HhH-GPD family protein [Halalkalicoccus jeotgali B3]
Length = 183
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 96/180 (53%), Gaps = 4/180 (2%)
Query: 142 LASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVL 201
+A LI+ + P + F L S++ Q ++ A +++ R L G + PE VL
Sbjct: 1 MARLIEEYDPYAEPEWGEEFERLVVSVISQSISTAAASAVRERVYELFDGP--ITPEAVL 58
Query: 202 ALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSV 261
A +L G + Y+++ A + L+ + + D+ + LT + GIG W+
Sbjct: 59 ATDDDELAAAGFGTQNTEYVNNAAEAFLERDLTREGLADHTDREVIEELTRIRGIGEWTA 118
Query: 262 HMFMIFSLHRPDVLPINDLGVRKGVQLLYS-LEELPRPSQMDQLCEKWRPYRSVASWYLW 320
M+++F L R DVLP+ DL VR+G++ LY+ EEL R +M ++ + WRPYRS + Y+W
Sbjct: 119 RMYLLFVLEREDVLPLGDLAVRRGIETLYNDGEELTR-EEMTEIAKAWRPYRSTGTKYVW 177
>gi|112491140|pdb|2H56|A Chain A, Crystal Structure Of Dna-3-methyladenine Glycosidase
(10174367) From Bacillus Halodurans At 2.55 A Resolution
gi|112491141|pdb|2H56|B Chain B, Crystal Structure Of Dna-3-methyladenine Glycosidase
(10174367) From Bacillus Halodurans At 2.55 A Resolution
gi|112491142|pdb|2H56|C Chain C, Crystal Structure Of Dna-3-methyladenine Glycosidase
(10174367) From Bacillus Halodurans At 2.55 A Resolution
Length = 233
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 95/183 (51%), Gaps = 1/183 (0%)
Query: 139 DRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPE 198
D +L I+I + PF +L SI+ QQL+ KA ++IY R L GG A PE
Sbjct: 30 DSRLFQFIEIAGEVQLPTKPNPFQSLVSSIVEQQLSIKAASAIYGRVEQLVGG-ALEKPE 88
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
+ ++ + LRQ GVS RK Y+ + ++G L + + + ++ LT + GIG
Sbjct: 89 QLYRVSDEALRQAGVSKRKIEYIRHVCEHVESGRLDFTELEGAEATTVIEKLTAIKGIGQ 148
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+ F FSL R DVL + D+G+++G + LY E + + W PY +VA Y
Sbjct: 149 WTAEXFXXFSLGRLDVLSVGDVGLQRGAKWLYGNGEGDGKKLLIYHGKAWAPYETVACLY 208
Query: 319 LWR 321
LW+
Sbjct: 209 LWK 211
>gi|416017493|ref|ZP_11564612.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas syringae pv.
glycinea str. B076]
gi|320323955|gb|EFW80039.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas syringae pv.
glycinea str. B076]
Length = 204
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 106/191 (55%), Gaps = 5/191 (2%)
Query: 135 LRNADRQLASLIDIHPPPTFD---SFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGG 191
L+ DR+ LI+ H P + PF AL +++ YQQL KAG ++ R AL
Sbjct: 2 LKAIDRRWELLIN-HIGPCLHPVTAAQDPFQALIKAVAYQQLHAKAGDAMVMRLRALFPD 60
Query: 192 EAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSD-SAIVNMDDKSLFTML 250
+ ++ L Q LR G S K + +A +G++ D SA + M +++L L
Sbjct: 61 ATFPAAQALIDLDEQTLRSCGFSASKCRAIKAIAAARVDGLVPDVSAALAMSNEALVERL 120
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRP 310
+ G+G W+V M +I+ L + DV+P +D GV +G + LY+LE P +M ++ E++ P
Sbjct: 121 IQLPGVGRWTVEMMLIYGLGQMDVMPASDYGVCEGYRRLYALELKPGHREMARIGERFGP 180
Query: 311 YRSVASWYLWR 321
YR++A+WYLWR
Sbjct: 181 YRTIAAWYLWR 191
>gi|71734928|ref|YP_275445.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71555481|gb|AAZ34692.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 204
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 105/191 (54%), Gaps = 5/191 (2%)
Query: 135 LRNADRQLASLIDIHPPPTFD---SFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGG 191
L+ DR+ LI+ H P + PF AL +++ YQQL KAG ++ R AL
Sbjct: 2 LKAIDRRWELLIN-HVGPCLHPVTAAQDPFQALIKAVAYQQLHAKAGDAMVMRLRALFPD 60
Query: 192 EAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSD-SAIVNMDDKSLFTML 250
+ ++ L Q LR G S K + +A +G+ D SA + M +++L L
Sbjct: 61 ATFPAAQALIDLDEQTLRSCGFSASKCRAIKAIAAARVDGLFPDVSAALAMSNEALVERL 120
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRP 310
+ G+G W+V M +I+ L + DV+P +D GV +G + LY+LE P +M ++ E++ P
Sbjct: 121 IQLPGVGRWTVEMMLIYGLGQMDVMPASDYGVCEGYRRLYALELKPGHREMARIGERFGP 180
Query: 311 YRSVASWYLWR 321
YR++A+WYLWR
Sbjct: 181 YRTIAAWYLWR 191
>gi|419823514|ref|ZP_14347059.1| putative DNA-modified purine glycosidase [Bacillus atrophaeus C89]
gi|388472302|gb|EIM09080.1| putative DNA-modified purine glycosidase [Bacillus atrophaeus C89]
Length = 287
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 108/214 (50%), Gaps = 11/214 (5%)
Query: 118 IARPLSSEGEVEAAIRHLRNADRQLASLIDIHP--PPTFDSFHTPFLALTRSILYQQLAF 175
I R E ++ + H L+++ + H P D ++ + + + I++QQL
Sbjct: 78 IKRIFQWENDLRHVLDHFSKT--SLSAIFEEHAGTPLVLD--YSVYNCIMKCIVHQQLNL 133
Query: 176 KAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSGRKASYLHDLARKYQN 230
++ RF+ G + V PET+ AL Q LR + S RKA Y D +R
Sbjct: 134 SFAYTLTERFVHTFGEQKDGVWCYPKPETIAALDYQDLRDLQFSMRKAEYAIDTSRMIAE 193
Query: 231 GILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLY 290
GIL S + + D+ + L + GIG W+V ++F L RP++ P+ D+G++ ++ +
Sbjct: 194 GILDLSELAQLTDEEIMKKLIKIRGIGPWTVQNVLMFGLGRPNLFPLADIGLQNAIKRHF 253
Query: 291 SLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
+L++ P M + ++W PY S AS YLWR +E
Sbjct: 254 ALDDKPAKDVMLAMSKEWEPYLSYASLYLWRSIE 287
>gi|410448475|ref|ZP_11302549.1| base excision DNA repair protein, HhH-GPD family [Leptospira sp.
Fiocruz LV3954]
gi|410017545|gb|EKO79603.1| base excision DNA repair protein, HhH-GPD family [Leptospira sp.
Fiocruz LV3954]
Length = 226
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 96/191 (50%), Gaps = 1/191 (0%)
Query: 135 LRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAG 194
LR D LID P + TP+ L +S+L QQL+ K + R I+L G
Sbjct: 32 LRKKDPITKKLIDSVGPCKLRTIGTPYQVLIKSVLGQQLSVKVALTFERRLISLAGSRKI 91
Query: 195 VVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVN 254
P +L + +L++IGVS K + +A Y ++DS + ++D + +L
Sbjct: 92 PPPNRILTIPNGKLKEIGVSRAKTETIKRIAEAYSIRNITDSKLRKLEDSDVLNLLCSFK 151
Query: 255 GIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSV 314
G+G W+ M +IF+L R D INDL +RK V+ Y + + ++ + + P+R++
Sbjct: 152 GVGPWTAEMVLIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIQRFLTDYSPFRTI 210
Query: 315 ASWYLWRFVEA 325
SWYLW V+
Sbjct: 211 LSWYLWADVDG 221
>gi|296331892|ref|ZP_06874357.1| putative DNA-modified purine glycosidase [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305673504|ref|YP_003865176.1| DNA-modified purine glycosidase [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296150970|gb|EFG91854.1| putative DNA-modified purine glycosidase [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305411748|gb|ADM36867.1| putative DNA-modified purine glycosidase [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 313
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 108/214 (50%), Gaps = 11/214 (5%)
Query: 118 IARPLSSEGEVEAAIRHLRNADRQLASLIDIHP--PPTFDSFHTPFLALTRSILYQQLAF 175
I R E +++ + H L+++ + H P D ++ + + + I++QQL
Sbjct: 104 IKRIFQWENDLQHVLDHFSKT--SLSAIFETHAGTPLVLD--YSVYNCIMKCIIHQQLNL 159
Query: 176 KAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSGRKASYLHDLARKYQN 230
++ RF+ G + V PET+ L Q LR + S RKA Y D +R
Sbjct: 160 SFAYTLTERFVHAFGEQKDGVWCYPKPETIAELDYQDLRDLQFSMRKAEYAIDTSRMIAE 219
Query: 231 GILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLY 290
G L+ S + NM D+ + L + GIG W+V ++F L RP++ P+ D+G++ ++ +
Sbjct: 220 GTLNLSELPNMTDEDIMKKLIKIRGIGPWTVQNVLMFGLGRPNLFPLADIGLQNAIKRHF 279
Query: 291 SLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
L++ P M + ++W PY S AS YLWR +E
Sbjct: 280 QLDDKPAKDVMLAMSKEWEPYLSYASLYLWRSIE 313
>gi|408400242|gb|EKJ79326.1| hypothetical protein FPSE_00466 [Fusarium pseudograminearum CS3096]
Length = 359
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 106/217 (48%), Gaps = 20/217 (9%)
Query: 128 VEAAIRHLRNADRQLASLIDIH-----PPPTFDSFHTPFLALTRSILYQQLAFKAGTSIY 182
++ A +L D ++ LI+ H P PF +L+ SI+ QQ++ A SI
Sbjct: 135 LKEACDYLIKVDARMKPLIENHHCRAFSPEGLAEEIDPFESLSSSIIGQQVSGAAAKSIK 194
Query: 183 TRFIALCGGEAGVV---PETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIV 239
+F+ L + G P V + ++LR G+S RKA Y+ LA K+ +G LS +
Sbjct: 195 GKFLTLFELQPGSRFPHPSQVAIKSIEELRTAGLSQRKAEYIKGLADKFGSGELSAQMLH 254
Query: 240 NMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPS 299
+ D+ + L V G+G WSV MF F+L R DV + DLGV++G+ + +
Sbjct: 255 DASDEEVMEKLIAVRGLGKWSVEMFACFALKRMDVFSLGDLGVQRGMAAFVGRDVAKLKA 314
Query: 300 Q------------MDQLCEKWRPYRSVASWYLWRFVE 324
+ M +L K+ PYRS+ WY+WR E
Sbjct: 315 KGGGKWKYMSEQDMIELSNKFSPYRSLFMWYMWRVEE 351
>gi|289625148|ref|ZP_06458102.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas syringae pv. aesculi
str. NCPPB 3681]
gi|289649457|ref|ZP_06480800.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas syringae pv. aesculi
str. 2250]
gi|422584263|ref|ZP_16659375.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330869082|gb|EGH03791.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 204
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 107/193 (55%), Gaps = 9/193 (4%)
Query: 135 LRNADRQLASLID-----IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALC 189
L+ DR+ LI+ +HP + PF AL +++ YQQL KAG ++ R AL
Sbjct: 2 LKAIDRRWELLINHVGPCLHP---LTAAQDPFQALIKAVAYQQLHAKAGDAMVMRLRALF 58
Query: 190 GGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSD-SAIVNMDDKSLFT 248
+ ++ L Q LR G S K + +A +G++ D SA + M +++L
Sbjct: 59 PDATFPAAQALIDLDEQTLRSCGFSASKCRAIKAIAAARVDGLVPDVSAALAMSNEALVE 118
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
L + G+G W+V M +I+ L + DV+P +D GV +G + LY+LE P +M ++ E++
Sbjct: 119 RLIQLPGVGRWTVEMMLIYGLGQMDVIPASDYGVCEGYRRLYALELKPGHREMARIGERF 178
Query: 309 RPYRSVASWYLWR 321
PYR++A+WYLWR
Sbjct: 179 GPYRTIAAWYLWR 191
>gi|257388117|ref|YP_003177890.1| HhH-GPD family protein [Halomicrobium mukohataei DSM 12286]
gi|257170424|gb|ACV48183.1| HhH-GPD family protein [Halomicrobium mukohataei DSM 12286]
Length = 202
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 95/183 (51%), Gaps = 6/183 (3%)
Query: 139 DRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPE 198
D L L++ H T F + SI+ QQ++ + + R V P
Sbjct: 11 DPDLGPLVETHGELTISPAEDLFARILTSIVRQQVSMASAAATRERLFDAVE----VTPS 66
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
VLA LR G+S +K Y++++A ++ LS + +MDD ++ LT + G+G
Sbjct: 67 GVLAADDDVLRDAGLSRQKTRYVNNVASAFEERGLSRTYFEDMDDDAVVDELTSITGVGE 126
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+ +M ++FSL R DV P+ DLG+R G+ L E+ R ++M E+W PYRS AS Y
Sbjct: 127 WTANMQLVFSLGREDVFPVGDLGIRTGMASLVD-PEMTR-AEMSAYAERWEPYRSYASLY 184
Query: 319 LWR 321
LWR
Sbjct: 185 LWR 187
>gi|401880891|gb|EJT45201.1| DNA-3-methyladenine glycosidase [Trichosporon asahii var. asahii
CBS 2479]
Length = 588
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 120/252 (47%), Gaps = 31/252 (12%)
Query: 65 PLRPRKIRKLSPDNGVDQASSSQPTESSKATSAKSTKSRAIQQQQQTLTVPRIIARPLSS 124
P +P K RK+S AS + E + +T K + ++ T+P +
Sbjct: 109 PTKPAKRRKVS-------ASDASAKEEAGSTPKKP------KAGKKDGTIPPLTRHTPPP 155
Query: 125 EGEVEAAIRHLRNADRQLASLIDIHPPPTF-------DSFHTPFLALTRSILYQQLAFKA 177
+ A+ HL AD + A L + P F PF +L SI+ QQ+++ A
Sbjct: 156 AVHLPTALAHLSAADPRFAKLSERVPCKPFLGPDGRNGHKDDPFRSLVTSIIGQQVSWMA 215
Query: 178 GTSIYTRFIAL-CGGEAGV--------VPETVLALTPQQLRQIGVSGRKASYLHDLARKY 228
SI RFI CG G PE V A L+ +G S RK+ Y+ +LA +
Sbjct: 216 ARSITKRFIEFFCGPVDGEERGDWPFPTPEQVAASNILDLKGVGFSTRKSEYVIELAGHF 275
Query: 229 QNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV-- 286
G LS A++ D+ + LT V GIG W+V MF+IF+L R DVLP+ DLGV+KG+
Sbjct: 276 AAGRLSTEALLTAPDEDVLAALTAVRGIGKWTVDMFLIFTLRRGDVLPVGDLGVQKGLLR 335
Query: 287 QLLYSLEELPRP 298
+L + LP P
Sbjct: 336 WVLAAHGALPPP 347
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 13/79 (16%)
Query: 253 VNGIGSWSVHM---FMIFSLHRPDVL--PINDLGVRKGVQLLYSLEELPRPSQMDQLCEK 307
+ IG W++ + ++ S++ P L ND R GV LL P +M+ L
Sbjct: 518 CDAIGGWNMTLPSHAVVHSIYPPQSLDDEWNDANSRGGVYLL--------PEEMEALTAN 569
Query: 308 WRPYRSVASWYLWRFVEAK 326
WRPYRSV +++ W K
Sbjct: 570 WRPYRSVGTFFTWAMAGEK 588
>gi|421111873|ref|ZP_15572342.1| base excision DNA repair protein, HhH-GPD family [Leptospira
santarosai str. JET]
gi|410802794|gb|EKS08943.1| base excision DNA repair protein, HhH-GPD family [Leptospira
santarosai str. JET]
Length = 226
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 96/191 (50%), Gaps = 1/191 (0%)
Query: 135 LRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAG 194
LR D LID P + TP+ L +S+L QQL+ K + R I+L G
Sbjct: 32 LRKKDPITQKLIDSVGPCKLRTIGTPYQVLIKSVLGQQLSVKVALTFERRLISLAGSRKI 91
Query: 195 VVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVN 254
P +L + +L++IGVS K + +A Y ++DS + ++D + +L
Sbjct: 92 PPPNRILTIPNGELKKIGVSQAKTETIKRIAEAYSIRNITDSKLRKLEDSDVLNLLCSFK 151
Query: 255 GIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSV 314
G+G W+ M +IF+L R D INDL +RK V+ Y + + ++ + + P+R++
Sbjct: 152 GVGPWTAEMVLIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIQRFLTDYSPFRTI 210
Query: 315 ASWYLWRFVEA 325
SWYLW V+
Sbjct: 211 LSWYLWADVDG 221
>gi|326469895|gb|EGD93904.1| DNA-3-methyladenine glycosylase [Trichophyton tonsurans CBS 112818]
Length = 379
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 109/240 (45%), Gaps = 48/240 (20%)
Query: 131 AIRHLRNADRQLASLIDIHP-----PPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRF 185
AI HL + D +L +ID P P PF AL I+ QQ++ A SI ++F
Sbjct: 130 AIAHLLSVDPRLKPVIDKFPDAPFRPADLAVEIDPFQALVSGIIGQQVSGAAAKSIKSKF 189
Query: 186 IALCG-----------------------GEAGV--------VPETVLALTPQQLRQIGVS 214
I+L G+AG+ P+ V+++ LR G+S
Sbjct: 190 ISLFSATTTPIDTQAETEAGDGDGEDEVGDAGLRYKPVPFPSPQQVVSMDIPTLRTAGLS 249
Query: 215 GRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDV 274
RKA Y+H LA K+ +G LS ++ D+ + L V G+G WSV MF++F L R DV
Sbjct: 250 QRKAEYIHGLAEKFASGELSARMLLTASDEEVLDKLIAVRGLGKWSVEMFLLFGLKRMDV 309
Query: 275 LPINDLGVRKGVQLLYSLE------------ELPRPSQMDQLCEKWRPYRSVASWYLWRF 322
DLGV++G+ + + M ++ + PYRS+ WY+WR+
Sbjct: 310 FSTGDLGVQRGMAAFAGRDVSKLKAKGGGKFKYMSEKDMVEIAAPFSPYRSLFMWYMWRW 369
>gi|456876308|gb|EMF91420.1| base excision DNA repair protein, HhH-GPD family [Leptospira
santarosai str. ST188]
Length = 226
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 96/191 (50%), Gaps = 1/191 (0%)
Query: 135 LRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAG 194
LR D LID P + TP+ L +S+L QQL+ K + R I+L G
Sbjct: 32 LRKKDPITKKLIDSVGPCKLRTIGTPYQVLIKSVLGQQLSVKVALTFERRLISLAGSRKI 91
Query: 195 VVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVN 254
P +L + +L++IGVS K + +A Y ++DS + ++D + +L
Sbjct: 92 PPPNRILTIPNGKLKEIGVSRAKTETIKRIAEAYSIRNITDSKLRKLEDSDVLNLLCSFK 151
Query: 255 GIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSV 314
G+G W+ M +IF+L R D INDL +RK V+ Y + + ++ + + P+R++
Sbjct: 152 GVGPWTAEMVLIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIQRFLTGYSPFRTI 210
Query: 315 ASWYLWRFVEA 325
SWYLW V+
Sbjct: 211 LSWYLWADVDG 221
>gi|359685109|ref|ZP_09255110.1| DNA-3-methyladenine glycosylase II [Leptospira santarosai str.
2000030832]
gi|422004985|ref|ZP_16352191.1| DNA-3-methyladenine glycosylase II [Leptospira santarosai serovar
Shermani str. LT 821]
gi|417256355|gb|EKT85780.1| DNA-3-methyladenine glycosylase II [Leptospira santarosai serovar
Shermani str. LT 821]
Length = 226
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 96/191 (50%), Gaps = 1/191 (0%)
Query: 135 LRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAG 194
LR D LID P + TP+ L +S+L QQL+ K + R I+L G
Sbjct: 32 LRKKDPITKKLIDSVGPCKLRTIGTPYQVLIKSVLGQQLSVKVALTFERRLISLAGSRKI 91
Query: 195 VVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVN 254
P +L + +L++IGVS K + +A Y ++DS + ++D + +L
Sbjct: 92 PPPNRILTIPNGKLKKIGVSQAKTETIKRIAEAYSIRNITDSKLRKLEDSDVLNLLCSFK 151
Query: 255 GIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSV 314
G+G W+ M +IF+L R D INDL +RK V+ Y + + ++ + + P+R++
Sbjct: 152 GVGPWTAEMVLIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIQRFLTGYSPFRTI 210
Query: 315 ASWYLWRFVEA 325
SWYLW V+
Sbjct: 211 LSWYLWADVDG 221
>gi|154685278|ref|YP_001420439.1| hypothetical protein RBAM_008240 [Bacillus amyloliquefaciens FZB42]
gi|154351129|gb|ABS73208.1| YfjP [Bacillus amyloliquefaciens FZB42]
Length = 287
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 127/267 (47%), Gaps = 21/267 (7%)
Query: 63 KIPLRPRKIRKLSPDNGVDQASSSQPTESSKATSAKSTKSRAIQQQQQTLTVPRIIARPL 122
K+PLR R KLS + +S+ P S ++ + I++ I
Sbjct: 37 KVPLRTRD-GKLSVITVQAEGTSADPV---FLVSGETDREEMIER----------IKHIF 82
Query: 123 SSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIY 182
E ++ + H + L+ L + H + + L + I++QQL ++
Sbjct: 83 QWEQPLQPVLDHFSKTN--LSGLFEEHAGTPLVLEYDVYNCLMKCIIHQQLNLSFAFTLT 140
Query: 183 TRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSA 237
RF+ G + V P+T+ L Q LR++ S RKA Y D++R G L+ +
Sbjct: 141 ERFVHAFGEQKDGVWCYPEPKTITGLEYQDLRELQFSMRKAEYAIDISRMIAEGALNLAE 200
Query: 238 IVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPR 297
+ ++ D+ + L + GIG W+V ++F L RP++ P+ D+G++ V+ ++LE+ P
Sbjct: 201 LTHLSDEDIMKKLITIRGIGPWTVQNVLMFGLGRPNLFPLADIGLQNAVKRRFALEDKPS 260
Query: 298 PSQMDQLCEKWRPYRSVASWYLWRFVE 324
M Q+ +W PY S AS YLWR +E
Sbjct: 261 KDVMLQVSSEWAPYLSYASLYLWRSIE 287
>gi|427739927|ref|YP_007059471.1| 3-methyladenine DNA glycosylase [Rivularia sp. PCC 7116]
gi|427374968|gb|AFY58924.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Rivularia sp. PCC 7116]
Length = 208
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 106/205 (51%), Gaps = 4/205 (1%)
Query: 118 IARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKA 177
+ +PL+ E + ++ L D+ A +++ P + F L R+IL QQ++ +
Sbjct: 3 LEQPLTEETFTQG-LKELATRDKDFAEILNKLGKPAKWEENAGFSGLVRTILGQQVSVNS 61
Query: 178 GTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSA 237
+ R A + + PE +L QL+ GVS +K +Y+ +LA N L
Sbjct: 62 AAATMKRLSATV---SPLTPEHLLQFEDAQLKACGVSRQKITYIKELAIAIINNDLDLQK 118
Query: 238 IVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPR 297
+ D++++ L + GIG W++ ++++ SL RPD P DLGV Q L LE+ P
Sbjct: 119 LAVADEETIRNQLKPIKGIGDWTIDIYLLMSLQRPDAFPKGDLGVILAYQKLKKLEKRPT 178
Query: 298 PSQMDQLCEKWRPYRSVASWYLWRF 322
P +++ + E WRP+R++A+ LW +
Sbjct: 179 PQELEIIAENWRPWRAIAARILWHY 203
>gi|429504306|ref|YP_007185490.1| hypothetical protein B938_03960 [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|429485896|gb|AFZ89820.1| hypothetical protein B938_03960 [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
Length = 287
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 92/167 (55%), Gaps = 5/167 (2%)
Query: 163 ALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSGRK 217
L + I++QQL ++ RF+ G + V P+T+ L Q LR++ S RK
Sbjct: 121 CLMKCIIHQQLNLSFAFTLTERFVHAFGEQKDGVWCYPEPKTIAGLEYQDLRELQFSMRK 180
Query: 218 ASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPI 277
A Y D++R G L+ + + ++ D+ + L + GIG W+V ++F L RP++ P+
Sbjct: 181 AEYAIDISRMIAEGALNLAELTHLSDEDIMKKLITIRGIGPWTVQNVLMFGLGRPNLFPL 240
Query: 278 NDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
D+G++ V+ ++LE+ P M Q+ +W PY S AS YLWR +E
Sbjct: 241 ADIGLQNAVKRRFALEDKPSKDVMLQVSSEWAPYLSYASLYLWRSIE 287
>gi|352101586|ref|ZP_08958822.1| DNA repair protein [Halomonas sp. HAL1]
gi|350600425|gb|EHA16491.1| DNA repair protein [Halomonas sp. HAL1]
Length = 204
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 101/206 (49%), Gaps = 13/206 (6%)
Query: 128 VEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIA 187
+E A++ L AD +A + PP F +I+ QQL+ +A +I R
Sbjct: 7 IEQAMQALAQADPDIARAYPLVGPPGPRQRDQGFATFFSTIISQQLSTEAARAIMGRVNT 66
Query: 188 LCGGEAGVVPE----TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDD 243
L +PE V+ + Q LR G+S RK Y LA G S + ++ D
Sbjct: 67 L-------LPELHAKAVMDVEGQALRDAGLSWRKIEYAKGLAEAELAGTFSADGLEHLSD 119
Query: 244 KSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQ 303
+ + +T + G G WS ++++FSL RPDV P +DL +R + L +++ P P Q Q
Sbjct: 120 EEVIAAITELRGFGRWSAEIYLMFSLKRPDVFPADDLALRVALGRLKGMDDKPTPKQARQ 179
Query: 304 LCEKWRPYRSVASWYLWRFVEAKGAP 329
L E W P+RSV S +LW + +G P
Sbjct: 180 LVEHWAPWRSVGSLFLWHYY--RGEP 203
>gi|452854778|ref|YP_007496461.1| putative DNA-modified purine glycosidase [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
gi|452079038|emb|CCP20791.1| putative DNA-modified purine glycosidase [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
Length = 287
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 92/167 (55%), Gaps = 5/167 (2%)
Query: 163 ALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSGRK 217
L + I++QQL ++ RF+ G + V P+T+ L Q LR++ S RK
Sbjct: 121 CLMKCIIHQQLNLSFAFTLTERFVHAFGEQKDGVWCYPEPKTIAGLEYQDLRELQFSMRK 180
Query: 218 ASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPI 277
A Y D++R G L+ + + ++ D+ + L + GIG W+V ++F L RP++ P+
Sbjct: 181 AEYAIDISRMIAEGALNLAELTHLSDEDIMKKLIAIRGIGPWTVQNVLMFGLGRPNLFPL 240
Query: 278 NDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
D+G++ V+ ++LE+ P M Q+ +W PY S AS YLWR +E
Sbjct: 241 ADIGLQNAVKRRFALEDKPSKDVMLQVSSEWAPYLSYASLYLWRSIE 287
>gi|119501178|ref|XP_001267346.1| DNA-3-methyladenine glycosylase, putative [Neosartorya fischeri
NRRL 181]
gi|119415511|gb|EAW25449.1| DNA-3-methyladenine glycosylase, putative [Neosartorya fischeri
NRRL 181]
Length = 362
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 102/221 (46%), Gaps = 28/221 (12%)
Query: 120 RPLSSEGEV-EAAIRHLRNADRQLASLIDIHP-----PPTFDSFHTPFLALTRSILYQQL 173
RP ++ G + E A+ HL D +L LI HP P PF +L SI+ QQ+
Sbjct: 142 RPTATTGTLLEKAVAHLIATDARLEPLIRRHPCSLFSPEGLAEEIDPFRSLVSSIIGQQV 201
Query: 174 AFKAGTSIYTRFIALCGGEAGV----------VPETVLALTPQQLRQIGVSGRKASYLHD 223
+ A SI +F+AL E PE V+ LR G+S RKA Y+H
Sbjct: 202 SGAAARSIKDKFVALFNRENDGQDPAKPRRFPTPEEVVQCDLATLRTAGLSQRKAEYIHG 261
Query: 224 LARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVR 283
L++K+ G LS ++N D+ L LT V G+G WSV MF F+L R DV DLGV+
Sbjct: 262 LSQKFATGELSARMLLNASDEELMEKLTAVRGLGRWSVEMFACFALKRIDVFSTGDLGVQ 321
Query: 284 KGVQLLYSLE------------ELPRPSQMDQLCEKWRPYR 312
+G + + M +L K+ PYR
Sbjct: 322 RGCAAFMGKDVSKLKAKGGGKFKYMAEKDMLELAAKFAPYR 362
>gi|116197677|ref|XP_001224650.1| hypothetical protein CHGG_06994 [Chaetomium globosum CBS 148.51]
gi|88178273|gb|EAQ85741.1| hypothetical protein CHGG_06994 [Chaetomium globosum CBS 148.51]
Length = 388
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 103/235 (43%), Gaps = 38/235 (16%)
Query: 128 VEAAIRHLRNADRQLASLIDIH-----PPPTFDSFHTPFLALTRSILYQQLAFKAGTSIY 182
+E A HL D ++ LID H P PF AL SI+ QQ++ A +I
Sbjct: 147 LEEACAHLIKVDARMKPLIDAHHCRIFSPEGLAEQIDPFEALCSSIISQQVSGAAAKTIK 206
Query: 183 TRFIALCG--------------------GEAGVVPETVLALTP-QQLRQIGVSGRKASYL 221
RFIAL +A TP + LR G+S RKA Y+
Sbjct: 207 NRFIALFNPTTTTTSTEPAAPTDNNTPTPPPTFPRPADVASTPLETLRTAGLSQRKAEYI 266
Query: 222 HDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLG 281
LA ++ G LS + + + + LT V G+G WS MF F+L R DV DLG
Sbjct: 267 QGLATEFTAGTLSAQLLADAPYEEVLARLTAVRGLGQWSAEMFACFALKRLDVFSTGDLG 326
Query: 282 VRKGVQLLYSLE------------ELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
V++G+ + + +M ++ E++RPYRS+ WY+WR E
Sbjct: 327 VQRGMAAFVGRDVAKLKARGGGKWKYMGEKEMVEVAERFRPYRSLFMWYMWRVEE 381
>gi|394992386|ref|ZP_10385166.1| YfjP [Bacillus sp. 916]
gi|393806718|gb|EJD68057.1| YfjP [Bacillus sp. 916]
Length = 287
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 92/167 (55%), Gaps = 5/167 (2%)
Query: 163 ALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSGRK 217
L + I++QQL ++ RF+ G + V P+T+ L Q LR++ S RK
Sbjct: 121 CLMKCIIHQQLNLSFAFTLTERFVHAFGEQKDGVWCYPEPKTIAGLEYQDLRELQFSMRK 180
Query: 218 ASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPI 277
A Y D++R G L+ + + ++ D+ + L + GIG W+V ++F L RP++ P+
Sbjct: 181 AEYAIDISRMIAEGALNLAELTHLSDEDIMKKLITIRGIGPWTVQNVLMFGLGRPNLFPL 240
Query: 278 NDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
D+G++ V+ ++LE+ P M Q+ +W PY S AS YLWR +E
Sbjct: 241 ADIGLQNAVKRRFALEDKPSKDVMLQVSSEWAPYLSYASLYLWRSIE 287
>gi|399992826|ref|YP_006573066.1| DNA repair protein [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
gi|398657381|gb|AFO91347.1| putative DNA repair protein [Phaeobacter gallaeciensis DSM 17395 =
CIP 105210]
Length = 222
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 109/206 (52%), Gaps = 10/206 (4%)
Query: 118 IARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKA 177
+ R ++S+ V L + D + A+ ID+ P F L +I+ QQ++ +
Sbjct: 15 VGRIITSDACVSEGAAWLADHDARFAAAIDLCGPLPLRRKPEGFAELLSAIVSQQVSVAS 74
Query: 178 GTSIYTRFIALCGGEAGVVPET-VLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDS 236
+I+ R + EAG+ T V A + LR +G+S +K Y H LA GI D
Sbjct: 75 ANAIWGRMV-----EAGLDTATAVAAASEDDLRGVGLSRQKIRYAHALA---AAGIDFD- 125
Query: 237 AIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELP 296
A+ + D + LT V+GIG+W+ ++ +FSL R DV DL +++G ++L L E P
Sbjct: 126 ALRQLPDSEVIETLTQVSGIGTWTAEIYAMFSLGRADVFAHGDLALQEGARILLDLPERP 185
Query: 297 RPSQMDQLCEKWRPYRSVASWYLWRF 322
+P+ M ++ E W P+RSVA+ LW +
Sbjct: 186 KPAAMRRIAEAWSPWRSVAARALWAY 211
>gi|52079265|ref|YP_078056.1| DNA glycosylase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|319646953|ref|ZP_08001181.1| YfjP protein [Bacillus sp. BT1B_CT2]
gi|404488131|ref|YP_006712237.1| DNA-glycosylase YfjP [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|423681226|ref|ZP_17656065.1| DNA glycosylase [Bacillus licheniformis WX-02]
gi|52002476|gb|AAU22418.1| putative DNA glycosylase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52347132|gb|AAU39766.1| putative DNA-glycosylase YfjP [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317391012|gb|EFV71811.1| YfjP protein [Bacillus sp. BT1B_CT2]
gi|383438000|gb|EID45775.1| DNA glycosylase [Bacillus licheniformis WX-02]
Length = 287
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 108/213 (50%), Gaps = 9/213 (4%)
Query: 118 IARPLSSEGEVEAAIRHLRNADRQLASLIDIHP-PPTFDSFHTPFLALTRSILYQQLAFK 176
+ R E ++ + H + L+S+ + H P FH + L + I++QQL
Sbjct: 78 VKRIFRWEESLQPVLDHFSQS--SLSSIFEEHAGTPLVLDFHL-YHCLMKCIIHQQLNLS 134
Query: 177 AGTSIYTRFIALCGGEA-GV----VPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNG 231
++ RF+ G + GV +PET+ L LR++ S RKA Y+ D +R +G
Sbjct: 135 FAYTLTERFVHTFGEQKDGVWFYPLPETIAQLDYNDLRELQFSMRKAEYVIDTSRMIADG 194
Query: 232 ILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYS 291
L + + D+ + L + GIG W+V ++F L RP++ P D+G++ ++ +
Sbjct: 195 RLDLDELDQLSDEDIMEKLVKIRGIGPWTVQNVLLFGLGRPNLFPAADIGIQNAIKRHFG 254
Query: 292 LEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
L + P QM ++ ++W PY S AS YLWR +E
Sbjct: 255 LNDKPTKEQMLEMSKEWHPYLSYASLYLWRSIE 287
>gi|19114903|ref|NP_593991.1| DNA-3-methyladenine glycosylase Mag1 [Schizosaccharomyces pombe
972h-]
gi|2494171|sp|Q92383.1|MAG1_SCHPO RecName: Full=DNA-3-methyladenine glycosylase 1; AltName:
Full=3-methyladenine DNA glycosidase 1; AltName:
Full=3MEA DNA glycosylase 1
gi|361131494|pdb|3S6I|A Chain A, Schizosaccaromyces Pombe 3-Methyladenine Dna Glycosylase
(Mag1) In Complex With Abasic-Dna.
gi|361131497|pdb|3S6I|D Chain D, Schizosaccaromyces Pombe 3-Methyladenine Dna Glycosylase
(Mag1) In Complex With Abasic-Dna.
gi|3645901|gb|AAC49524.1| 3-methyladenine DNA glycosylase [Schizosaccharomyces pombe]
gi|13624907|emb|CAC36900.1| DNA-3-methyladenine glycosylase Mag1 [Schizosaccharomyces pombe]
Length = 228
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 99/192 (51%), Gaps = 4/192 (2%)
Query: 134 HLRNAD---RQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
HL D ++L L+ + P P+ L R++ QQL KA +I+ RF ++
Sbjct: 21 HLSGLDENWKRLVKLVGNYRPNRSMEKKEPYEELIRAVASQQLHSKAANAIFNRFKSISN 80
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGIL-SDSAIVNMDDKSLFTM 249
PE + + + +R G S RK L +A +G++ + + ++ L
Sbjct: 81 NGQFPTPEEIRDMDFEIMRACGFSARKIDSLKSIAEATISGLIPTKEEAERLSNEELIER 140
Query: 250 LTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWR 309
LT + GIG W+V M +IFSL+R DV+P +DL +R G + L+ L ++P + + E
Sbjct: 141 LTQIKGIGRWTVEMLLIFSLNRDDVMPADDLSIRNGYRYLHRLPKIPTKMYVLKHSEICA 200
Query: 310 PYRSVASWYLWR 321
P+R+ A+WYLW+
Sbjct: 201 PFRTAAAWYLWK 212
>gi|335438322|ref|ZP_08561070.1| HhH-GPD family protein [Halorhabdus tiamatea SARL4B]
gi|334892516|gb|EGM30749.1| HhH-GPD family protein [Halorhabdus tiamatea SARL4B]
Length = 190
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 96/180 (53%), Gaps = 6/180 (3%)
Query: 145 LIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALT 204
L+ H T + PF L SI+ QQL+ + +I R E P ++ A +
Sbjct: 17 LVAEHGELTLEPARDPFERLVVSIVRQQLSIASADAIRERLFERFTVE----PSSLRAPS 72
Query: 205 PQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMF 264
L +G+S RKA + ++A ++ S D + LT + GIG W+ MF
Sbjct: 73 IDALADVGLSERKAETIRNVAVAFEKRGYSRDYFAEHTDGEVVAELTEITGIGPWTAKMF 132
Query: 265 MIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
+++ L R DV P+ DLG+RKG+ ++ +E+ R + +++ E+WRPYRS+AS YLWR V+
Sbjct: 133 LVYGLGREDVFPVEDLGIRKGMWAVFD-DEMDRAAMVER-AERWRPYRSIASLYLWRVVD 190
>gi|402572309|ref|YP_006621652.1| 3-methyladenine DNA glycosylase [Desulfosporosinus meridiei DSM
13257]
gi|402253506|gb|AFQ43781.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Desulfosporosinus meridiei DSM 13257]
Length = 227
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 94/160 (58%), Gaps = 4/160 (2%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASY 220
F AL +I+ QQ++ KA +I+ R + C + + PE + A++ ++L+ G+S RK Y
Sbjct: 43 FTALVNAIVGQQISTKAQVTIWNRMLEKC---SAITPEILRAISAEELQSCGISMRKTLY 99
Query: 221 LHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDL 280
+ ++A Q G L+ + M D+ + L+ + GIG W+ M MIFSL RPDV+ DL
Sbjct: 100 IKEIADSVQKGSLNLRLLQTMSDEEVCLHLSQIKGIGVWTAEMLMIFSLQRPDVMSWYDL 159
Query: 281 GVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLW 320
+ +G+++LY ++ P ++ ++ PY +VAS YLW
Sbjct: 160 AILRGLRMLYHHRKIT-PQLFNKYKRRYSPYATVASLYLW 198
>gi|448738682|ref|ZP_21720703.1| HhH-GPD family protein [Halococcus thailandensis JCM 13552]
gi|445801068|gb|EMA51412.1| HhH-GPD family protein [Halococcus thailandensis JCM 13552]
Length = 194
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 98/185 (52%), Gaps = 5/185 (2%)
Query: 142 LASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVL 201
L +LI+ D+ PF L SI+ Q ++ + ++ R + P TVL
Sbjct: 14 LRALIEEFGEIEIDTAEDPFERLVVSIINQSISTASANAVRERVFERFDE---ITPATVL 70
Query: 202 ALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSV 261
A L G+ K Y+ + AR ++ L + + D+ + L + GIG W+
Sbjct: 71 AADADALSDAGLGEAKTEYVRNAARAFRERDLGREGLADASDEEVIDELGEIRGIGEWTA 130
Query: 262 HMFMIFSLHRPDVLPINDLGVRKGVQLLYS-LEELPRPSQMDQLCEKWRPYRSVASWYLW 320
M++IF+L R DVLP+ DL VR+G++ LY EEL R ++M ++ E+WRPYRS+A+ Y+W
Sbjct: 131 RMYLIFALGREDVLPLGDLAVRRGIESLYGDGEELTR-AEMREIAERWRPYRSLATLYIW 189
Query: 321 RFVEA 325
E+
Sbjct: 190 HHYES 194
>gi|405119666|gb|AFR94438.1| DNA-3-methyladenine glycosidase [Cryptococcus neoformans var.
grubii H99]
Length = 445
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 89/163 (54%), Gaps = 6/163 (3%)
Query: 130 AAIRHLRNADRQLASLIDIHPPPTFDSFHT--PFLALTRSILYQQLAFKAGTSIYTRFIA 187
+AI HL D + + + P F + PF L SI+ QQ+++ A +I TRF A
Sbjct: 81 SAISHLSALDPRFSLFFEHLPCRPFVNLEAIDPFRTLVTSIIGQQVSWMAAKAINTRFRA 140
Query: 188 LCG----GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDD 243
L G E P+ VL LR G+SGRKA Y+ LA + +G LS + + D
Sbjct: 141 LFGFTHEKEGFPSPQMVLMQDVASLRGAGLSGRKAEYVLSLADHFASGQLSTQLLQSGTD 200
Query: 244 KSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV 286
+ + L V GIG W++ MFMIFSL RPD+L + DLGV+KG+
Sbjct: 201 EEISKALIAVRGIGQWTIDMFMIFSLRRPDILAVGDLGVQKGL 243
>gi|443633609|ref|ZP_21117786.1| putative DNA-modified purine glycosidase [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|443346403|gb|ELS60463.1| putative DNA-modified purine glycosidase [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
Length = 287
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 107/214 (50%), Gaps = 11/214 (5%)
Query: 118 IARPLSSEGEVEAAIRHLRNADRQLASLIDIHP--PPTFDSFHTPFLALTRSILYQQLAF 175
I R E +++ + H L+++ + H P D ++ + + + I++QQL
Sbjct: 78 IKRIFQWEHDLQHVLDHFSKT--SLSAIFEEHAGTPLVLD--YSVYNCIMKCIIHQQLNL 133
Query: 176 KAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSGRKASYLHDLARKYQN 230
++ RF+ G + V PET+ L Q LR + S RKA Y D +R
Sbjct: 134 SFAYTLTERFVHAFGEQKDGVWCYPKPETIAELDYQDLRDLQFSMRKAEYAIDTSRMIAE 193
Query: 231 GILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLY 290
G L S + NM D+ + L + GIG W+V ++F L RP++ P+ D+G++ ++ +
Sbjct: 194 GTLDLSELPNMTDEDIMKKLIKIRGIGPWTVQNVLMFGLGRPNLFPLADIGLQNAIKRHF 253
Query: 291 SLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
L++ P M + ++W PY S AS YLWR +E
Sbjct: 254 QLDDKPAKDVMLAMSKEWEPYLSYASLYLWRSIE 287
>gi|398309866|ref|ZP_10513340.1| putative DNA-modified purine glycosidase [Bacillus mojavensis
RO-H-1]
Length = 287
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 108/214 (50%), Gaps = 11/214 (5%)
Query: 118 IARPLSSEGEVEAAIRHLRNADRQLASLIDIHP--PPTFDSFHTPFLALTRSILYQQLAF 175
I R E +++ + H + L+++ + H P D ++ + + + I++QQL
Sbjct: 78 IKRIFQWEHDLQHVLEHFSKTN--LSAIFEEHAGTPLVLD--YSVYNCIMKCIVHQQLNL 133
Query: 176 KAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSGRKASYLHDLARKYQN 230
++ RF+ G + V PET+ AL Q LR + S RKA Y D +R
Sbjct: 134 SFAYTLTERFVHTFGEQKDGVWCYPKPETIAALDYQDLRDLQFSMRKAEYAIDTSRMIAE 193
Query: 231 GILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLY 290
G L S + M D+ + L + GIG W+V ++F L RP++ P+ D+G++ ++ +
Sbjct: 194 GTLDLSELPQMTDEDIMKKLIKIRGIGPWTVQNVLMFGLGRPNLFPLADIGLQNAIKRHF 253
Query: 291 SLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
+L++ P M + +W PY S AS YLWR +E
Sbjct: 254 NLDDKPAKDVMLAMSREWEPYLSYASLYLWRSIE 287
>gi|327294663|ref|XP_003232027.1| DNA-3-methyladenine glycosylase [Trichophyton rubrum CBS 118892]
gi|326465972|gb|EGD91425.1| DNA-3-methyladenine glycosylase [Trichophyton rubrum CBS 118892]
Length = 366
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 111/244 (45%), Gaps = 46/244 (18%)
Query: 125 EGEVEAAIRHLRNADRQLASLIDIHP-----PPTFDSFHTPFLALTRSILYQQLAFKAGT 179
E + AI HL + D +L +I+ P P PF AL I+ QQ++ A
Sbjct: 113 ENLLAGAIAHLLSVDPRLKPVINKFPDAPFRPADLAVEIDPFQALVSGIIGQQVSGAAAK 172
Query: 180 SIYTRFIALCG---------------------GEAGV--------VPETVLALTPQQLRQ 210
SI ++FI+L G+AG+ P+ V+++ LR
Sbjct: 173 SIKSKFISLFSATTTTTTDTQVEADGDGEDEVGDAGLRYKPVPFPSPQQVVSMDIPTLRT 232
Query: 211 IGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLH 270
G+S RKA Y+H LA K+ +G LS ++ D+ + L V G+G WSV MF++F L
Sbjct: 233 AGLSQRKAEYIHGLADKFASGELSARMLLTASDEEVLDKLIAVRGLGKWSVEMFLLFGLK 292
Query: 271 RPDVLPINDLGVRKGVQLLYSLE------------ELPRPSQMDQLCEKWRPYRSVASWY 318
R DV DLGV++G+ + + M ++ + PYRS+ WY
Sbjct: 293 RMDVFSTGDLGVQRGMAAFAGRDVSKLKAKGGGKFKYMSEKDMIEIAAPFSPYRSLFMWY 352
Query: 319 LWRF 322
+WR+
Sbjct: 353 MWRW 356
>gi|380486413|emb|CCF38718.1| HhH-GPD superfamily base excision DNA repair protein
[Colletotrichum higginsianum]
Length = 375
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 104/220 (47%), Gaps = 23/220 (10%)
Query: 128 VEAAIRHLRNADRQLASLID-----IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIY 182
+E A RHL + ++ LI+ + P PF +L I+ QQ++ A SI
Sbjct: 149 LEEACRHLIQVEPRMKPLIEKNHCRVFSPEGLAEKIDPFESLCSGIISQQVSGAAARSIK 208
Query: 183 TRFIAL-----CGGEAGVVPE--TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSD 235
+F+AL GE+ P V A + + LR G+S RKA Y+ LA K+ +G LS
Sbjct: 209 NKFVALFTEDGSDGESKGFPHPSEVAAASIEHLRTAGLSQRKAEYVKGLAEKFVSGELSA 268
Query: 236 SAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLE-- 293
+ + + L V G+G WSV MF F L R DV + DLGV++G+ +
Sbjct: 269 QMLAESPYEEVRDRLIAVRGLGLWSVEMFACFGLKRMDVFSLGDLGVQRGMAAFAGRDVA 328
Query: 294 ---------ELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
+ +M ++ ++ PYRSV WY+WR E
Sbjct: 329 KLKAKGGKWKYMSEKEMVEMASRFAPYRSVFMWYMWRVEE 368
>gi|223986618|ref|ZP_03636612.1| hypothetical protein HOLDEFILI_03934 [Holdemania filiformis DSM
12042]
gi|223961413|gb|EEF65931.1| hypothetical protein HOLDEFILI_03934 [Holdemania filiformis DSM
12042]
Length = 234
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 113/227 (49%), Gaps = 16/227 (7%)
Query: 121 PLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTS 180
P+ GE E I++L+ D +L ++ID P F A+ I+ QQ++ KA +
Sbjct: 7 PIFRYGETE--IQYLKQRDPKLGAIIDQIGPIERTVDDDLFSAIVHHIVGQQISTKAQQT 64
Query: 181 IYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVN 240
I+ R G + ET+LA ++L+ G++ +K Y+ D ARK +G L +
Sbjct: 65 IWRRMREDLGE---INAETILAAGTERLQGFGMTFKKVEYIEDCARKAASGELDLEQLPQ 121
Query: 241 MDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQ 300
DK + L + GIG W+ M ++F L RPDV DL + +G++++Y ++ R
Sbjct: 122 CSDKEIIDQLVSLKGIGVWTAEMILLFCLQRPDVFSYGDLAILRGLRMVYHHRKIDR--- 178
Query: 301 MDQLCEKWR----PYRSVASWYLWRFVEAKGAPSSAAAVAAGAALPQ 343
+L EK+R PY SVAS YLW A GA A A PQ
Sbjct: 179 --KLFEKYRRRFSPYGSVASLYLW--AVAGGAVEGMKDYAPKQANPQ 221
>gi|403070444|ref|ZP_10911776.1| HhH-GPD family protein [Oceanobacillus sp. Ndiop]
Length = 229
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 108/198 (54%), Gaps = 6/198 (3%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A +LR D+ L ID P + F AL +I+ QQ++ KA +++ R +++ G
Sbjct: 9 ATDYLRKKDKILGEAIDRIGPIEREIMTNIFEALVNNIVGQQISMKALETVWKRMVSMIG 68
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
+ PE + + ++++ G+S RKA Y+ A + +G L ++ ++ D+++ L
Sbjct: 69 T---ITPENIAGKSAKEIQACGISMRKAEYIKLAADQVMSGELEIESLYDLPDEAVIERL 125
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRP 310
+ + GIG W+ M +IFS+ R +++ NDL + +G+++LY + + D+ ++ P
Sbjct: 126 SELKGIGIWTAEMILIFSMQRANIMSWNDLAIHRGLRMLYHHRRIDK-KLFDKYKRRYTP 184
Query: 311 YRSVASWYLWRFVEAKGA 328
Y SVAS YLW A GA
Sbjct: 185 YASVASLYLWEI--ATGA 200
>gi|336115084|ref|YP_004569851.1| DNA-3-methyladenine glycosylase II [Bacillus coagulans 2-6]
gi|335368514|gb|AEH54465.1| DNA-3-methyladenine glycosylase II [Bacillus coagulans 2-6]
Length = 287
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 104/214 (48%), Gaps = 17/214 (7%)
Query: 128 VEAAIRHLRNADRQLAS------------LIDIHPPPTFDSFHTPFLALTRSILYQQLAF 175
VE I HL ++ LA L H F +P+ L + I++QQL
Sbjct: 74 VEKRIFHLFQWEKDLAGITNHFTGTALEPLFKEHRGTPFVLDFSPYACLVKCIIHQQLNM 133
Query: 176 KAGTSIYTRFIALCGGEA-GV----VPETVLALTPQQLRQIGVSGRKASYLHDLARKYQN 230
K ++ RF+ G + GV PE AL LR + S RKA Y+ L++ +
Sbjct: 134 KFAHTLTERFVYHFGFQKDGVWFYPFPEKTAALQVADLRALQFSERKAEYVIGLSKLVVS 193
Query: 231 GILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLY 290
G L +A+ D+ + L + GIG W+V F++F L R + P D+G++K ++ L+
Sbjct: 194 GELDLAALEKEPDEEILKTLVKIRGIGPWTVQNFLMFGLGRLNHFPKADIGIQKALKKLF 253
Query: 291 SLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
LE+ P +MD + W PY S AS YLWR +E
Sbjct: 254 QLEKKPTYEEMDAYAKDWEPYLSYASLYLWRSIE 287
>gi|398348759|ref|ZP_10533462.1| DNA-3-methyladenine glycosylase II [Leptospira broomii str. 5399]
Length = 208
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 101/188 (53%), Gaps = 2/188 (1%)
Query: 135 LRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAG 194
LR D L LI+ P T +P+ L +S++ QQL+ KA +++ R I G
Sbjct: 14 LRRKDPVLRKLINRIGPCTLKMVGSPYHVLLKSVISQQLSVKAASTMENRVIERFGSRKR 73
Query: 195 V-VPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMV 253
P +L L+ +QLR G+S KA + +A Y++G ++D + ++D+ + L +
Sbjct: 74 FPEPNLLLGLSAEQLRSAGLSFAKADTVKRIASAYESGEITDRKLRKLEDEKVLEFLCSI 133
Query: 254 NGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRS 313
G+G W+ M ++F+L R D +NDL +RK ++ + + ++ L ++ PYR+
Sbjct: 134 KGVGPWTAEMVLMFALDRWDHFSLNDLILRKSIERHFGIHR-DSKKEILALAGRFSPYRT 192
Query: 314 VASWYLWR 321
+ SWYLWR
Sbjct: 193 IFSWYLWR 200
>gi|443428212|pdb|4HSB|A Chain A, S. Pombe 3-methyladenine Dna Glycosylase-like Protein Mag2
Bound To Damaged Dna
Length = 217
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 106/205 (51%), Gaps = 4/205 (1%)
Query: 122 LSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSF--HTPFLALTRSILYQQLAFKAGT 179
+S + + + A +HL + D + +SL+ P T H P+ + R+I Q+L+ A
Sbjct: 5 MSKDSDYKRAEKHLSSIDNKWSSLVKKVGPCTLTPHPEHAPYEGIIRAITSQKLSDAATN 64
Query: 180 SIYTRFIALCGGEAGV-VPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNG-ILSDSA 237
SI +F C P+ ++ + L + G S K+ +H +A N I S S
Sbjct: 65 SIINKFCTQCSDNDEFPTPKQIMETDVETLHECGFSKLKSQEIHIVAEAALNKQIPSKSE 124
Query: 238 IVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPR 297
I M ++ L L+ + G+ W++ M+ IF+L R D++P +D ++ + + L P+
Sbjct: 125 IEKMSEEELMESLSKIKGVKRWTIEMYSIFTLGRLDIMPADDSTLKNEAKEFFGLSSKPQ 184
Query: 298 PSQMDQLCEKWRPYRSVASWYLWRF 322
++++L + +PYR++A+WYLW+
Sbjct: 185 TEEVEKLTKPCKPYRTIAAWYLWQI 209
>gi|440690734|pdb|4B21|A Chain A, Unprecedented Sculpting Of Dna At Abasic Sites By Dna
Glycosylase Homolog Mag2
gi|440690738|pdb|4B22|A Chain A, Unprecedented Sculpting Of Dna At Abasic Sites By Dna
Glycosylase Homolog Mag2
gi|440690742|pdb|4B23|A Chain A, Unprecedented Sculpting Of Dna At Abasic Sites By Dna
Glycoslase Homolog Mag2
gi|440690746|pdb|4B24|A Chain A, Unprecedented Sculpting Of Dna At Abasic Sites By Dna
Glycoslase Homolog Mag2
Length = 232
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 109/213 (51%), Gaps = 6/213 (2%)
Query: 114 VPRIIARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSF--HTPFLALTRSILYQ 171
VPR +S + + + A +HL + D + +SL+ P T H P+ + R+I Q
Sbjct: 14 VPR--GSHMSKDSDYKRAEKHLSSIDNKWSSLVKKVGPCTLTPHPEHAPYEGIIRAITSQ 71
Query: 172 QLAFKAGTSIYTRFIALCGGEAGV-VPETVLALTPQQLRQIGVSGRKASYLHDLARKYQN 230
+L+ A SI +F C P+ ++ + L + G S K+ +H +A N
Sbjct: 72 KLSDAATNSIINKFCTQCSDNDEFPTPKQIMETDVETLHECGFSKLKSQEIHIVAEAALN 131
Query: 231 G-ILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLL 289
I S S I M ++ L L+ + G+ W++ M+ IF+L R D++P +D ++ +
Sbjct: 132 KQIPSKSEIEKMSEEELMESLSKIKGVKRWTIEMYSIFTLGRLDIMPADDSTLKNEAKEF 191
Query: 290 YSLEELPRPSQMDQLCEKWRPYRSVASWYLWRF 322
+ L P+ ++++L + +PYR++A+WYLW+
Sbjct: 192 FGLSSKPQTEEVEKLTKPCKPYRTIAAWYLWQI 224
>gi|91775652|ref|YP_545408.1| DNA-3-methyladenine glycosylase II [Methylobacillus flagellatus KT]
gi|91709639|gb|ABE49567.1| DNA-3-methyladenine glycosylase II [Methylobacillus flagellatus KT]
Length = 142
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 76/125 (60%), Gaps = 1/125 (0%)
Query: 197 PETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAI-VNMDDKSLFTMLTMVNG 255
P +LA QLR G SGRK +Y+ LA+ G + D A + M+D++L T LT + G
Sbjct: 9 PAALLATDVAQLRACGFSGRKITYITGLAQAALAGNIPDHATALAMEDEALITQLTALPG 68
Query: 256 IGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVA 315
IG W+V M ++ +L R D+LP++DLGVR+G + L L P P + + W P+RS A
Sbjct: 69 IGRWTVEMMLMHTLRRADILPVDDLGVREGFRRLKGLSTAPTPRLLRDIGLAWSPHRSSA 128
Query: 316 SWYLW 320
+WYLW
Sbjct: 129 AWYLW 133
>gi|55980298|ref|YP_143595.1| DNA-3-methyladenine glycosidase [Thermus thermophilus HB8]
gi|55771711|dbj|BAD70152.1| DNA-3-methyladenine glycosidase [Thermus thermophilus HB8]
Length = 185
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 86/162 (53%), Gaps = 10/162 (6%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
PF L S++ QQL+ +A + R L PE L LRQ G+S KA
Sbjct: 29 PFRVLAESVVAQQLSTRAAARLAERLFRLVPP----TPEAFLEAPLDLLRQAGLSRAKAL 84
Query: 220 YLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIND 279
L DLA K + G+L + ++D+++ LT V G+G W+ MF++F L RPDV P+ D
Sbjct: 85 ALKDLAAKAEEGLLD--GLDRLEDEAVVERLTRVRGVGLWTAEMFLMFGLGRPDVWPVRD 142
Query: 280 LGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
LG+R+ L+ + P + E +RPYRS +WYLWR
Sbjct: 143 LGLRRAAARLFGVA----PEALPAFGEAFRPYRSHLAWYLWR 180
>gi|157691536|ref|YP_001485998.1| DNA-3-methyladenine glycosylase II [Bacillus pumilus SAFR-032]
gi|157680294|gb|ABV61438.1| DNA-3-methyladenine glycosylase II [Bacillus pumilus SAFR-032]
Length = 333
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 111/214 (51%), Gaps = 9/214 (4%)
Query: 118 IARPLSSEGEVEAAIRHLRNADRQLASLIDIHP-PPTFDSFHTPFLALTRSILYQQLAFK 176
+ R E +++A H ++ LAS+ + H P FH + L + I++QQL
Sbjct: 121 VKRIFGMEHQLDAVQEHF--SETNLASVFERHKGTPLMLDFHL-YHCLMKCIIHQQLNLS 177
Query: 177 AGTSIYTRFIALCGGEA-GV----VPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNG 231
+ RF+ G + GV +PET+ +L ++LR++ S RKA Y+ D++++ +G
Sbjct: 178 FAYELTKRFVHTYGEQIDGVWFDPLPETIASLETEELRKLQFSQRKAEYVIDVSKRIVSG 237
Query: 232 ILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYS 291
L + + D + L + GIG W+V ++ L RP++ P+ D+G++ ++ +
Sbjct: 238 SLCLDELHELTDLEVEERLLPIRGIGPWTVQNVLMNGLGRPNLFPMADIGIQNAIKRHFD 297
Query: 292 LEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEA 325
L E P +M L + W PY S AS YLWR +E
Sbjct: 298 LPEKPTKEEMAALSKDWTPYLSYASLYLWRSIET 331
>gi|336416646|ref|ZP_08596979.1| hypothetical protein HMPREF1017_04087 [Bacteroides ovatus
3_8_47FAA]
gi|335937703|gb|EGM99601.1| hypothetical protein HMPREF1017_04087 [Bacteroides ovatus
3_8_47FAA]
Length = 223
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 112/211 (53%), Gaps = 17/211 (8%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
E I HL+ D++LA +ID F AL SI+ QQ++ KA +I+ R
Sbjct: 9 ETEIEHLKKVDKRLAEVIDKVGRVKRKIIPDLFSALVNSIIGQQISTKAHRTIWERMKQR 68
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
+ P V L+ +L++ G++ +KA Y+ + RK +G + + M D+ + T
Sbjct: 69 LND---ISPTVVNDLSLDELQKFGITFKKAVYIQSMTRKIVSGEFNIQELETMSDEEICT 125
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
L+ ++GIG+W+ M MI S+ RP++L DL + +G++++Y + + + ++ ++ +++
Sbjct: 126 KLSELDGIGTWTAEMLMIHSMQRPNILSYGDLAIIRGLRMIYHHQTIDK-AKFERYKKRY 184
Query: 309 RPYRSVASWYLWRFVEAKGAPSSAAAVAAGA 339
PY S+AS Y+W AVA GA
Sbjct: 185 SPYASIASLYIW-------------AVAGGA 202
>gi|240280040|gb|EER43544.1| DNA-3-methyladenine glycosylase [Ajellomyces capsulatus H143]
Length = 399
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 103/232 (44%), Gaps = 41/232 (17%)
Query: 128 VEAAIRHLRNADRQLASLIDIHPPPTFDSFH-----TPFLALTRSILYQQLAFKAGTSIY 182
+E A HL N QL +++ HP P F PF +L I+ QQ++ A SI
Sbjct: 156 LEEATAHLLNVAPQLRPVVEKHPCPLFSPAGLAEEIDPFNSLVSGIIGQQVSGAAARSIK 215
Query: 183 TRFIALC--GGEAG------------------VVPETVLALTPQQLRQIGVSGRKASYLH 222
+F+AL G E G +V + +A LR G+S RKA Y+
Sbjct: 216 KKFMALFRGGAEGGNGNYSNNIHNNNHNANDVIVAKCDIA----TLRSAGLSQRKAEYIQ 271
Query: 223 DLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGV 282
LA K+ +G LS ++ D+ + L V G+G WSV MF F L R DV DLGV
Sbjct: 272 GLAEKFASGELSAQMLLQASDEEVLEKLIAVRGLGRWSVEMFSCFGLKRMDVFSTGDLGV 331
Query: 283 RKGVQLLYSLE------------ELPRPSQMDQLCEKWRPYRSVASWYLWRF 322
++G+ + + +M + + PYRS+ WY+WR
Sbjct: 332 QRGMAAFMGRDVSKLKAKGGGKFKYMSEKEMVDIAAPFSPYRSLFMWYMWRI 383
>gi|19112661|ref|NP_595869.1| DNA-3-methyladenine glycosidase Mag2 [Schizosaccharomyces pombe
972h-]
gi|8928183|sp|O94468.1|MAG2_SCHPO RecName: Full=Probable DNA-3-methyladenine glycosylase 2; AltName:
Full=3-methyladenine DNA glycosidase 2; AltName:
Full=3MEA DNA glycosylase 2
gi|4106688|emb|CAA22627.1| DNA-3-methyladenine glycosidase Mag2 [Schizosaccharomyces pombe]
Length = 213
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 106/205 (51%), Gaps = 4/205 (1%)
Query: 122 LSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSF--HTPFLALTRSILYQQLAFKAGT 179
+S + + + A +HL + D + +SL+ P T H P+ + R+I Q+L+ A
Sbjct: 1 MSKDSDYKRAEKHLSSIDNKWSSLVKKVGPCTLTPHPEHAPYEGIIRAITSQKLSDAATN 60
Query: 180 SIYTRFIALCGGEAGV-VPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNG-ILSDSA 237
SI +F C P+ ++ + L + G S K+ +H +A N I S S
Sbjct: 61 SIINKFCTQCSDNDEFPTPKQIMETDVETLHECGFSKLKSQEIHIVAEAALNKQIPSKSE 120
Query: 238 IVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPR 297
I M ++ L L+ + G+ W++ M+ IF+L R D++P +D ++ + + L P+
Sbjct: 121 IEKMSEEELMESLSKIKGVKRWTIEMYSIFTLGRLDIMPADDSTLKNEAKEFFGLSSKPQ 180
Query: 298 PSQMDQLCEKWRPYRSVASWYLWRF 322
++++L + +PYR++A+WYLW+
Sbjct: 181 TEEVEKLTKPCKPYRTIAAWYLWQI 205
>gi|302661113|ref|XP_003022227.1| hypothetical protein TRV_03630 [Trichophyton verrucosum HKI 0517]
gi|291186164|gb|EFE41609.1| hypothetical protein TRV_03630 [Trichophyton verrucosum HKI 0517]
Length = 376
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 109/236 (46%), Gaps = 44/236 (18%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFH-----TPFLALTRSILYQQLAFKAGTSIYTRF 185
AI HL + D +L +ID P F PF AL I+ QQ++ A SI ++F
Sbjct: 131 AIAHLLSVDPRLKPVIDKFPDAPFRPADLAVEIDPFQALVSGIIGQQVSGAAAKSIKSKF 190
Query: 186 IALCG-------------------GEAGV--------VPETVLALTPQQLRQIGVSGRKA 218
I+L G+AG+ P+ V+++ LR G+S RKA
Sbjct: 191 ISLFSVTTTTDTQVEADGDDEDEVGDAGLRYKPAPFPSPQQVVSMDIPTLRTAGLSQRKA 250
Query: 219 SYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
Y+H LA K+ +G LS ++ D+ + L V G+G WSV MF++F L R DV
Sbjct: 251 EYIHGLADKFASGELSARMLLTASDEEVLDKLIAVRGLGKWSVEMFLLFGLKRMDVFSTG 310
Query: 279 DLGVRKGVQLLYSLE------------ELPRPSQMDQLCEKWRPYRSVASWYLWRF 322
DLGV++G+ + + M ++ + PYRS+ WY+WR+
Sbjct: 311 DLGVQRGMAAFAGRDVSKLKAKGGGKFKYMSEKDMVEIAAPFSPYRSLFMWYVWRW 366
>gi|322710222|gb|EFZ01797.1| DNA-3-methyladenine glycosylase, putative [Metarhizium anisopliae
ARSEF 23]
Length = 360
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 20/220 (9%)
Query: 122 LSSEGEVEAAIRHLRNADRQLASLID-----IHPPPTFDSFHTPFLALTRSILYQQLAFK 176
+++E ++ A HL + D ++ L++ + P PF +L I+ QQ++
Sbjct: 129 ITTENLLDVACAHLISVDERMRPLVERNHCKVFSPEGLAEKIDPFESLASGIISQQVSGA 188
Query: 177 AGTSIYTRFIALCGGEAGVV----PETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGI 232
A SI +F+AL P V + + LR G+S RKA Y+ LA K+ NG
Sbjct: 189 AARSIKAKFLALFDTRDRTTRFPHPSEVAPVPVETLRTAGLSQRKAEYIKGLAEKFANGE 248
Query: 233 LSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSL 292
LS + + + L L V G+G WSV MF F L R DV + DLGV++G+
Sbjct: 249 LSTEMLHDAPYEELVEKLIAVRGLGRWSVEMFACFGLKRMDVFSVGDLGVQRGMAAFVGR 308
Query: 293 EELPRPS-----------QMDQLCEKWRPYRSVASWYLWR 321
+ S +M + EK+ PYRS+ W +WR
Sbjct: 309 DVAKLKSKGGKWKYMSEREMLDISEKFAPYRSLFMWLMWR 348
>gi|406697130|gb|EKD00396.1| DNA-3-methyladenine glycosidase [Trichosporon asahii var. asahii
CBS 8904]
Length = 492
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 119/252 (47%), Gaps = 31/252 (12%)
Query: 65 PLRPRKIRKLSPDNGVDQASSSQPTESSKATSAKSTKSRAIQQQQQTLTVPRIIARPLSS 124
P +P K RK+S AS + E + +T K + ++ T+P +
Sbjct: 109 PTKPAKRRKVS-------ASDASAKEEAGSTPKKP------KAGKKDGTIPPLTQHTPPP 155
Query: 125 EGEVEAAIRHLRNADRQLASLIDIHPPPTF-------DSFHTPFLALTRSILYQQLAFKA 177
+ A+ HL AD + L + P F PF +L SI+ QQ+++ A
Sbjct: 156 AVHLPTALAHLSAADPRFTKLSERVPCKPFLGPDGRNGHKDDPFRSLVTSIIGQQVSWMA 215
Query: 178 GTSIYTRFIAL-CGGEAGV--------VPETVLALTPQQLRQIGVSGRKASYLHDLARKY 228
SI RFI CG G PE V A L+ +G S RK+ Y+ +LA +
Sbjct: 216 ARSITKRFIEFFCGPVDGEERGDWPFPTPEQVAASNILDLKGVGFSTRKSEYVIELAGHF 275
Query: 229 QNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV-- 286
G LS A++ D+ + LT V GIG W+V MF+IF+L R DVLP+ DLGV+KG+
Sbjct: 276 AAGRLSTEALLTAPDEDVLAALTAVRGIGKWTVDMFLIFTLRRGDVLPVGDLGVQKGLLR 335
Query: 287 QLLYSLEELPRP 298
+L + LP P
Sbjct: 336 WVLAAHGALPPP 347
>gi|347541873|ref|YP_004856509.1| DNA-3-methyladenine glycosylase II [Candidatus Arthromitus sp.
SFB-rat-Yit]
gi|346984908|dbj|BAK80583.1| DNA-3-methyladenine glycosylase II [Candidatus Arthromitus sp.
SFB-rat-Yit]
Length = 222
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 104/194 (53%), Gaps = 8/194 (4%)
Query: 129 EAAIRHLRNADRQLASLIDI--HPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFI 186
+ A+ +L++ D++LA +ID H DS F ++ I+ QQ++ KA +I+ R
Sbjct: 7 DEAVEYLKSKDKKLAWVIDHVGHIDREVDS--DLFSSVVHHIIGQQISTKAHRTIWQRMN 64
Query: 187 ALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSL 246
G V PET+ + +L+ +G++ RKA Y+ D + K G +A+ M D
Sbjct: 65 DYLGK---VTPETINSANIAELQSLGMTFRKAEYIKDFSEKVTIGKFDLAAVKKMSDTEA 121
Query: 247 FTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCE 306
L + GIG W+ M +IF L RP++L DL + +G++++Y E+ R Q ++ +
Sbjct: 122 IDALVNLKGIGVWTAEMILIFCLQRPNILSFGDLAILRGMRMVYQHREIDRK-QFEKYRK 180
Query: 307 KWRPYRSVASWYLW 320
+ PY SVAS Y W
Sbjct: 181 RLSPYGSVASLYFW 194
>gi|323141350|ref|ZP_08076242.1| base excision DNA repair protein, HhH-GPD family
[Phascolarctobacterium succinatutens YIT 12067]
gi|322414176|gb|EFY05003.1| base excision DNA repair protein, HhH-GPD family
[Phascolarctobacterium succinatutens YIT 12067]
Length = 237
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 108/197 (54%), Gaps = 10/197 (5%)
Query: 126 GEVEAAIRHLRNADRQLASLID--IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYT 183
GE E I +L+ D++LA I+ H D+ F A+ R I+ QQ++ KA +++
Sbjct: 30 GETE--INYLKRKDKKLAWAIEQIGHIERKLDA--NLFAAVVRHIVGQQISSKAQATVWA 85
Query: 184 RFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDD 243
R A V P TV A + ++L+ +G+S RKA Y+ D A K +G A+ M D
Sbjct: 86 RLEARL---KVVTPFTVHAASAEELQGLGMSLRKAEYIKDFADKIVSGEFDLQAVEQMSD 142
Query: 244 KSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQ 303
T L+ + GIG W+ M ++F L RPD+L +DL +++G+++LY ++ R +
Sbjct: 143 AEAITALSSLKGIGKWTAEMILLFCLQRPDILSYDDLAIQRGLRMLYHHRKITRE-LFAK 201
Query: 304 LCEKWRPYRSVASWYLW 320
+++ PY S A+ YLW
Sbjct: 202 YQKRYSPYGSTAAIYLW 218
>gi|291543903|emb|CBL17012.1| DNA-3-methyladenine glycosylase II [Ruminococcus champanellensis
18P13]
Length = 214
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 113/221 (51%), Gaps = 30/221 (13%)
Query: 129 EAAIRHLRNADRQLASLIDI--HPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFI 186
E I +LR DR+L +ID H D+ F ++ I+ QQ++ KA +I+ R
Sbjct: 7 EREISYLRQKDRRLCEVIDRIGHIDREVDT--DLFSSVIHHIIGQQISTKAQATIWLRMQ 64
Query: 187 ALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSL 246
G V ET+L+ +L+ +G++ RKA Y+ D A+K +G + A+ +M D
Sbjct: 65 EALGK---VNAETILSAGAPKLQSLGMTFRKAEYITDFAQKVCSGACNLEAVWHMTDADA 121
Query: 247 FTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCE 306
L + GIG W+ M ++F + RPD+ +DL +++G++++Y + R +L E
Sbjct: 122 IRALCTLKGIGVWTAEMILLFCMQRPDIFSFDDLAIQRGLRMVYHHRNIDR-----KLFE 176
Query: 307 KWR----PYRSVASWYLWRFVEAKGAPSSAAAVAAGAALPQ 343
K+R PY SVAS YLW AAG A+P+
Sbjct: 177 KYRRRFTPYCSVASLYLW--------------AAAGGAIPE 203
>gi|430756109|ref|YP_007210487.1| hypothetical protein A7A1_0617 [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|430020629|gb|AGA21235.1| Hypothetical protein YfjP [Bacillus subtilis subsp. subtilis str.
BSP1]
Length = 287
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 107/214 (50%), Gaps = 11/214 (5%)
Query: 118 IARPLSSEGEVEAAIRHLRNADRQLASLIDIHP--PPTFDSFHTPFLALTRSILYQQLAF 175
I R E ++ + H L+++ + H P D ++ + + + I++QQL
Sbjct: 78 IKRIFQWENHLQHVLDHFSKT--SLSAIFEEHAGTPLVLD--YSVYNCMMKCIIHQQLNL 133
Query: 176 KAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSGRKASYLHDLARKYQN 230
++ RF+ G + V PET+ L Q LR + S RKA Y D +R
Sbjct: 134 SFAYTLTERFVHAFGEQKDGVWCYPKPETIAELDYQDLRDLQFSMRKAEYTIDTSRMIAE 193
Query: 231 GILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLY 290
G LS S + +M D+ + L + GIG W+V ++F L RP++ P+ D+G++ ++ +
Sbjct: 194 GTLSLSELPHMADEDIMKKLIKIRGIGPWTVQNILMFGLGRPNLFPLADIGLQNAIKRHF 253
Query: 291 SLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
L++ P M + ++W PY S AS YLWR +E
Sbjct: 254 QLDDKPAKDVMLAMSKEWEPYLSYASLYLWRSIE 287
>gi|390602613|gb|EIN12006.1| DNA glycosylase [Punctularia strigosozonata HHB-11173 SS5]
Length = 458
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 129/295 (43%), Gaps = 74/295 (25%)
Query: 98 KSTKSRAIQQQQQTLTVPRIIARP------------LSSEGEV---------EAAIRHLR 136
K T R+ + P+ I +P L EGE+ E A RHL
Sbjct: 50 KGTPKRSRAGNEDAAASPKSILKPSPSPGPTAQRASLEPEGELVPAVLTFSFEGAKRHLI 109
Query: 137 NADRQLASLIDIHPPPTFDSFH--TPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAG 194
+ D + A + F + PF LT+SIL QQ+++KA SI +FI L
Sbjct: 110 SVDGRFADVFAKMKCRPFQNLERVDPFRTLTQSILGQQISWKAARSITYKFIRLFHMSLP 169
Query: 195 VV----PETVLALTP------------QQLRQIGVSGRKASYLHDLARKYQNGILSDSAI 238
PE+V P LR G+SGRKA Y+ DLA+++ +G LS +
Sbjct: 170 EARPDGPESVFQQFPFPTAHQVATIDIPALRSAGLSGRKAEYVQDLAQRFADGRLSTKKL 229
Query: 239 VNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRP 298
+ DD+ L ML V GIG + MF +FSL RPD+LP+ DLGV++G
Sbjct: 230 LEADDEELARMLLEVRGIGR-VLDMFAMFSLRRPDILPVGDLGVQRG------------- 275
Query: 299 SQMDQLCEKWRPYRSVASWYLWRFVEAKGAPSSAAAVAAGAALPQPQQEEQQQPQ 353
+ W+L + +PS A+AA LP+P +EQQQ Q
Sbjct: 276 ---------------MLRWFL-----SLHSPSHRFAIAAD-KLPKPPGDEQQQQQ 309
>gi|321314529|ref|YP_004206816.1| putative DNA-modified purine glycosidase [Bacillus subtilis BSn5]
gi|428278285|ref|YP_005560020.1| hypothetical protein BSNT_01337 [Bacillus subtilis subsp. natto
BEST195]
gi|291483242|dbj|BAI84317.1| hypothetical protein BSNT_01337 [Bacillus subtilis subsp. natto
BEST195]
gi|320020803|gb|ADV95789.1| putative DNA-modified purine glycosidase [Bacillus subtilis BSn5]
Length = 287
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 107/214 (50%), Gaps = 11/214 (5%)
Query: 118 IARPLSSEGEVEAAIRHLRNADRQLASLIDIHP--PPTFDSFHTPFLALTRSILYQQLAF 175
I R E ++ + H L+++ + H P D ++ + + + I++QQL
Sbjct: 78 IKRIFQWENHLQHVLDHFSKT--SLSAIFEEHAGTPLVLD--YSVYNCMMKCIIHQQLNL 133
Query: 176 KAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSGRKASYLHDLARKYQN 230
++ RF+ G + V PET+ L Q LR + S RKA Y D +R
Sbjct: 134 SFAYTLTERFVHAFGEQKDGVWCYPKPETIAELDYQDLRDLQFSMRKAEYTIDTSRMIAE 193
Query: 231 GILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLY 290
G LS S + +M D+ + L + GIG W+V ++F L RP++ P+ D+G++ ++ +
Sbjct: 194 GTLSLSELPHMADEDIMKKLIKIRGIGPWTVQNILMFGLGRPNLFPLADIGLQNAIKRHF 253
Query: 291 SLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
L++ P M + ++W PY S AS YLWR +E
Sbjct: 254 QLDDKPAKDVMLAMSKEWEPYLSYASLYLWRSIE 287
>gi|384174480|ref|YP_005555865.1| DNA-3-methyladenine glycosylase [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
gi|349593704|gb|AEP89891.1| DNA-3-methyladenine glycosylase [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
Length = 287
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 107/214 (50%), Gaps = 11/214 (5%)
Query: 118 IARPLSSEGEVEAAIRHLRNADRQLASLIDIHP--PPTFDSFHTPFLALTRSILYQQLAF 175
I R E ++ + H L+++ + H P D ++ + + + I++QQL
Sbjct: 78 IKRIFQWENHLQHVLDHFSKT--SLSAIFEEHAGTPLVLD--YSVYNCMMKCIIHQQLNL 133
Query: 176 KAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSGRKASYLHDLARKYQN 230
++ RF+ G + V PET+ L Q LR + S RKA Y D +R
Sbjct: 134 SFAYTLTERFVHAFGEQKDGVWCYPKPETIAELDYQDLRDLQFSMRKAEYTIDTSRMIAE 193
Query: 231 GILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLY 290
G LS S + +M D+ + L + GIG W+V ++F L RP++ P+ D+G++ ++ +
Sbjct: 194 GTLSLSELPHMADEDIMKKLIKIRGIGPWTVQNVLMFGLGRPNLFPLADIGLQNAIKRHF 253
Query: 291 SLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
L++ P M + ++W PY S AS YLWR +E
Sbjct: 254 QLDDKPAKDVMLAMSKEWEPYLSYASLYLWRSIE 287
>gi|16077868|ref|NP_388682.1| DNA-modified purine glycosidase [Bacillus subtilis subsp. subtilis
str. 168]
gi|221308636|ref|ZP_03590483.1| hypothetical protein Bsubs1_04458 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221312960|ref|ZP_03594765.1| hypothetical protein BsubsN3_04409 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221317886|ref|ZP_03599180.1| hypothetical protein BsubsJ_04353 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221322159|ref|ZP_03603453.1| hypothetical protein BsubsS_04449 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|402775024|ref|YP_006628968.1| DNA-modified purine glycosidase [Bacillus subtilis QB928]
gi|418034103|ref|ZP_12672579.1| hypothetical protein BSSC8_35230 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|449093508|ref|YP_007425999.1| putative DNA-modified purine glycosidase [Bacillus subtilis XF-1]
gi|452912467|ref|ZP_21961095.1| hhH-GPD superbase excision DNA repair family protein [Bacillus
subtilis MB73/2]
gi|81637509|sp|O31544.1|YFJP_BACSU RecName: Full=Putative DNA-3-methyladenine glycosylase YfjP
gi|2633125|emb|CAB12630.1| putative DNA-modified purine glycosidase [Bacillus subtilis subsp.
subtilis str. 168]
gi|2780400|dbj|BAA24301.1| YfjP [Bacillus subtilis]
gi|351469047|gb|EHA29243.1| hypothetical protein BSSC8_35230 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|402480209|gb|AFQ56718.1| Putative DNA-modified purine glycosidase [Bacillus subtilis QB928]
gi|407956481|dbj|BAM49721.1| DNA-modified purine glycosidase [Bacillus subtilis BEST7613]
gi|407963752|dbj|BAM56991.1| DNA-modified purine glycosidase [Bacillus subtilis BEST7003]
gi|449027423|gb|AGE62662.1| putative DNA-modified purine glycosidase [Bacillus subtilis XF-1]
gi|452117495|gb|EME07889.1| hhH-GPD superbase excision DNA repair family protein [Bacillus
subtilis MB73/2]
Length = 287
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 107/214 (50%), Gaps = 11/214 (5%)
Query: 118 IARPLSSEGEVEAAIRHLRNADRQLASLIDIHP--PPTFDSFHTPFLALTRSILYQQLAF 175
I R E ++ + H L+++ + H P D ++ + + + I++QQL
Sbjct: 78 IKRIFQWENHLQHVLDHFSKT--SLSAIFEEHAGTPLVLD--YSVYNCMMKCIIHQQLNL 133
Query: 176 KAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSGRKASYLHDLARKYQN 230
++ RF+ G + V PET+ L Q LR + S RKA Y D +R
Sbjct: 134 SFAYTLTERFVHAFGEQKDGVWCYPKPETIAELDYQDLRDLQFSMRKAEYTIDTSRMIAE 193
Query: 231 GILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLY 290
G LS S + +M D+ + L + GIG W+V ++F L RP++ P+ D+G++ ++ +
Sbjct: 194 GTLSLSELPHMADEDIMKKLIKIRGIGPWTVQNVLMFGLGRPNLFPLADIGLQNAIKRHF 253
Query: 291 SLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
L++ P M + ++W PY S AS YLWR +E
Sbjct: 254 QLDDKPAKDVMLAMSKEWEPYLSYASLYLWRSIE 287
>gi|386359517|ref|YP_006057762.1| HhH-GPD superfamily base excision DNA repair protein [Thermus
thermophilus JL-18]
gi|383508544|gb|AFH37976.1| HhH-GPD superfamily base excision DNA repair protein [Thermus
thermophilus JL-18]
Length = 185
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 87/162 (53%), Gaps = 10/162 (6%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
PF L S++ QQL+ +A + R L P+ L LRQ G+S KA
Sbjct: 29 PFRVLAESVVAQQLSTRAAARLTERLFRLVPP----TPKAFLEAPLDLLRQAGLSRAKAL 84
Query: 220 YLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIND 279
L DLA K + G+L+ + ++D+++ LT V G+G W+ MF++F L RPDV P+ D
Sbjct: 85 ALKDLAAKAEEGLLA--GLDRLEDEAVVERLTRVRGVGPWTAEMFLMFGLGRPDVWPVRD 142
Query: 280 LGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
LG+R+ L+ + P + E +RPYRS +WYLWR
Sbjct: 143 LGLRRAAARLFGVA----PEALPAFGEAFRPYRSHLAWYLWR 180
>gi|402223909|gb|EJU03972.1| DNA glycosylase [Dacryopinax sp. DJM-731 SS1]
Length = 381
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 94/178 (52%), Gaps = 20/178 (11%)
Query: 127 EVEAAIRHLRNADRQLASLIDIHPP----PTFDSFHTPFLALTRSILYQQLAFKAGTSIY 182
++E A +H+ AD++ + IH P D H PF L SIL QQ+++KA SI
Sbjct: 69 DLEVAKQHIIAADKRFKEVF-IHLPCRPFEVLDVVH-PFRTLATSILGQQISWKAARSIV 126
Query: 183 TRFIALCGG---EAGVVPETVLAL---TPQQL--------RQIGVSGRKASYLHDLARKY 228
+F+ L E G VP + TP QL R G+S RKA Y+ DLA +
Sbjct: 127 AKFLLLFDPSLPERGDVPPAMHDRPFPTPHQLAGMDIPTLRSAGLSQRKAEYVIDLATHF 186
Query: 229 QNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV 286
NG LS S + D+ L L V GIG W+V MF IFS RPD++P DLGV++G+
Sbjct: 187 ANGQLSPSFLAKASDEQLAEHLIAVRGIGRWTVDMFAIFSARRPDIMPYGDLGVQRGL 244
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 260 SVHMFMIFSLHRPDVLPINDLGVR---KGVQLLYSLEELPRPSQMDQLCEKWRPYRSVAS 316
+VH+ + + PD L ++ L R K VQ L P++MD L E W+PYRS+A
Sbjct: 315 AVHVPLGKPVKLPDGLTVSQLKSRLSGKKVQKGMYLT----PAEMDALTEGWKPYRSIAV 370
Query: 317 WYLWRFVE 324
WY+W E
Sbjct: 371 WYMWALSE 378
>gi|365170643|ref|ZP_09361096.1| hypothetical protein HMPREF1006_01972 [Synergistes sp. 3_1_syn1]
gi|363618010|gb|EHL69372.1| hypothetical protein HMPREF1006_01972 [Synergistes sp. 3_1_syn1]
Length = 221
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 99/180 (55%), Gaps = 10/180 (5%)
Query: 141 QLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETV 200
++ +L H P F AL I QQ++ +A +++ R A G V PE V
Sbjct: 26 EIGALTGWHVEPDI------FSALVHHIAGQQISTQAQRTVWGRISA---GIKEVTPENV 76
Query: 201 LALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWS 260
+ ++++ G+S RKA Y+ +LA+K +G +A+ MDD+ + L + GIG W+
Sbjct: 77 RSAGVEKMQSFGISFRKAEYITELAQKTASGEFDPAALWEMDDEDVIKELCALRGIGRWT 136
Query: 261 VHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLW 320
M +IFS+ R DVL D G+R+G+++LY +E+ P ++ +++ P S+AS YLW
Sbjct: 137 AEMLLIFSMQRRDVLSFGDFGIRRGLRMLYRHKEIT-PELFERYRKRYSPCGSLASLYLW 195
>gi|386757469|ref|YP_006230685.1| DNA-modified purine glycosidase [Bacillus sp. JS]
gi|384930751|gb|AFI27429.1| DNA-modified purine glycosidase [Bacillus sp. JS]
Length = 287
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 107/214 (50%), Gaps = 11/214 (5%)
Query: 118 IARPLSSEGEVEAAIRHLRNADRQLASLIDIHP--PPTFDSFHTPFLALTRSILYQQLAF 175
I R E ++ + H L+++ + H P D ++ + + + I++QQL
Sbjct: 78 IKRIFQWEHHLQHVLDHFSKT--SLSAIFEEHAGTPLVLD--YSVYNCMMKCIIHQQLNL 133
Query: 176 KAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSGRKASYLHDLARKYQN 230
++ RF+ G + V PET+ L Q LR + S RKA Y D ++
Sbjct: 134 SFAYTLTERFVHAFGEQKDGVWCYPKPETIAKLDYQDLRDLQFSMRKAEYTIDTSKMIAE 193
Query: 231 GILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLY 290
G LS S + +M D+ + L + GIG W+V ++F L RP++ P+ D+G++ ++ +
Sbjct: 194 GTLSLSELTHMADEDIMKKLIKIRGIGPWTVQNVLMFGLGRPNLFPLADIGLQNAIKRHF 253
Query: 291 SLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
L++ P M + ++W PY S AS YLWR +E
Sbjct: 254 QLDDKPAKDVMLAMSKEWEPYLSYASLYLWRSIE 287
>gi|398389438|ref|XP_003848180.1| hypothetical protein MYCGRDRAFT_15641, partial [Zymoseptoria
tritici IPO323]
gi|339468054|gb|EGP83156.1| hypothetical protein MYCGRDRAFT_15641 [Zymoseptoria tritici IPO323]
Length = 285
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 115/235 (48%), Gaps = 36/235 (15%)
Query: 122 LSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHT-----PFLALTRSILYQQLAFK 176
L+++ + A HL + LA LI+ HP F + P+ +L SI+ QQ++
Sbjct: 42 LTNKSLLPTAYAHLISVAPNLAPLIESHPCTPFSAEGLAEPVDPWQSLVSSIIGQQVSGA 101
Query: 177 AGTSIYTRFIALCG---------GEAGVVPETVLALTPQQ--------LRQIGVSGRKAS 219
A +SI +F+AL A P++ TP Q LR G+S RKA
Sbjct: 102 AASSIKRKFVALFNTAEDENIDTAAAASKPKSTFP-TPAQVVSKDLPTLRTAGLSQRKAE 160
Query: 220 YLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIND 279
Y+ LA + + L+ S ++N D+ + L + G+G WSV MFM+FSL R DV D
Sbjct: 161 YISGLAAAFLDKSLTPSLLLNGTDQEVHDALIAIRGLGPWSVEMFMLFSLKRTDVFSTGD 220
Query: 280 LGVRKGVQLLYSLEELP-------------RPSQMDQLCEKWRPYRSVASWYLWR 321
LGV++G+ ++ + +M ++ E++RP+RS+ WY+WR
Sbjct: 221 LGVQRGMAGFVGKWKVGLKAKEGGGKWKYMKEQEMLEIGERFRPFRSIFMWYMWR 275
>gi|429849223|gb|ELA24627.1| DNA-3-methyladenine [Colletotrichum gloeosporioides Nara gc5]
Length = 372
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 104/223 (46%), Gaps = 26/223 (11%)
Query: 128 VEAAIRHLRNADRQLASLIDIHPPPTFDSFH-----TPFLALTRSILYQQLAFKAGTSIY 182
+E A RHL D ++ LI+ + F PF +L I+ QQ++ A SI
Sbjct: 143 LEEACRHLIEVDPRMKPLIEKNYCRVFSQEGLAEKIDPFESLCSGIISQQVSGAAARSIK 202
Query: 183 TRFIALC----GGEAGV------VPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGI 232
+FIAL GEA P V + ++LR G+S RKA Y+ LA K+ +G
Sbjct: 203 NKFIALFSDEDNGEAEKPKKKFPQPSEVAPTSIERLRTAGLSQRKAEYVKGLAEKFASGE 262
Query: 233 LSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSL 292
L+ + + + + L V G+G WSV MF F L R DV + DLGV++G+
Sbjct: 263 LTATMLAEAPYEEVRDKLIAVRGLGLWSVEMFACFGLKRMDVFSLGDLGVQRGMAAFVGR 322
Query: 293 E-----------ELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
+ + +M ++ + PYRSV WY+WR E
Sbjct: 323 DVAKLKAKGGKWKYMSEKEMAEMASPFAPYRSVFMWYMWRVEE 365
>gi|322699688|gb|EFY91448.1| DNA-3-methyladenine glycosylase, putative [Metarhizium acridum CQMa
102]
Length = 360
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 103/220 (46%), Gaps = 20/220 (9%)
Query: 122 LSSEGEVEAAIRHLRNADRQLASLID-----IHPPPTFDSFHTPFLALTRSILYQQLAFK 176
+++E ++ A HL D ++ L++ I P PF +L I+ QQ++
Sbjct: 129 ITTENLLDVACAHLIRVDERMRPLVERNHCKIFSPEGLAEKIDPFESLASGIISQQVSGA 188
Query: 177 AGTSIYTRFIAL--CGGEAGVVPE--TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGI 232
A SI +F+AL G + P V ++ + LR G+S RKA Y+ LA K+ NG
Sbjct: 189 AAKSIKAKFVALFETGDKTTRFPHPSEVTPMSIETLRTAGLSQRKAEYIKGLAEKFANGE 248
Query: 233 LSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSL 292
LS + + L L V G+G WSV MF F L R DV + DLGV++G+
Sbjct: 249 LSTEMLHEAPYEELVEKLIAVRGLGRWSVEMFACFGLKRMDVFSVGDLGVQRGMAAFVGK 308
Query: 293 EELPRPS-----------QMDQLCEKWRPYRSVASWYLWR 321
+ S +M + K+ PYRS+ W +WR
Sbjct: 309 DVAKLKSKGGKWKYMSEKEMLDISGKFAPYRSLFMWLMWR 348
>gi|358055905|dbj|GAA98250.1| hypothetical protein E5Q_04933 [Mixia osmundae IAM 14324]
Length = 407
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 90/176 (51%), Gaps = 14/176 (7%)
Query: 130 AAIRHLRNADRQLASLIDIHPPPTFD---SFHTPFLALTRSILYQQLAFKAGTSIYTRFI 186
AA HL AD + L+D P F+ +PF +L SIL QQ+++ A SI RFI
Sbjct: 85 AAREHLIAADPRFGHLMDSLPCKPFEMPEETVSPFRSLCSSILGQQISWLAARSIKYRFI 144
Query: 187 ALCG-----------GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSD 235
L E P V + + Q LR G+S RKA Y+ DLA K+ G L
Sbjct: 145 RLWFPDLPEKPDYSIVEPFPTPFQVASASVQHLRSAGLSQRKAEYIQDLASKFVEGWLDA 204
Query: 236 SAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYS 291
A++ M D+ + L V GIG W+V M +IF RPD++P DLGV+K + ++
Sbjct: 205 KAMLKMSDEEVMEHLIKVRGIGRWTVEMALIFVFLRPDIMPSGDLGVQKAMLTWFT 260
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 298 PSQMDQLCEKWRPYRSVASWYLWRFVEAKGA 328
P +M++L + WRPYRS+A WYLW + + +
Sbjct: 375 PEEMEELSQSWRPYRSIAVWYLWSLSDGENS 405
>gi|398307222|ref|ZP_10510808.1| DNA-modified purine glycosidase [Bacillus vallismortis DV1-F-3]
Length = 287
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 105/212 (49%), Gaps = 7/212 (3%)
Query: 118 IARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKA 177
I R E +++ + H L+++ + H ++ + + + I++QQL
Sbjct: 78 IKRIFQWEHDLQHVLDHFSKT--SLSAIFEEHAGTPLILDYSVYNCIMKCIIHQQLNLSF 135
Query: 178 GTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGI 232
++ RF+ G + V PET+ L Q LR + S RKA Y D +R G
Sbjct: 136 AYTLTERFVHAFGEQKDGVWCYPKPETIADLDYQDLRDLQFSMRKAEYAIDTSRMIAEGT 195
Query: 233 LSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSL 292
L S + +M D+ + L + GIG W+V ++F L RP++ P+ D+G++ ++ + L
Sbjct: 196 LDLSKLPDMTDEDIMKKLVKIRGIGPWTVQNVLMFGLGRPNLFPLADIGLQNAIKRHFHL 255
Query: 293 EELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
++ P M + ++W PY S AS YLWR +E
Sbjct: 256 DDKPAKDVMLAMSKEWEPYLSYASLYLWRSIE 287
>gi|354559127|ref|ZP_08978379.1| HhH-GPD family protein [Desulfitobacterium metallireducens DSM
15288]
gi|353544297|gb|EHC13752.1| HhH-GPD family protein [Desulfitobacterium metallireducens DSM
15288]
Length = 200
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 108/202 (53%), Gaps = 6/202 (2%)
Query: 121 PLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTS 180
P G+ E + L+ D++L I+ + PF AL S++ QQ++ KA +
Sbjct: 2 PFFEYGQKE--MECLKRKDKRLGEAIEKIGMIQREILPDPFTALISSVVSQQISNKAAAT 59
Query: 181 IYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVN 240
+++R L G + PE + + ++ G+S RKA Y+ +A NG + + +
Sbjct: 60 VWSRLTTLLGS---ITPECIAQVDQSAIQGCGMSVRKAGYIKGIADAAMNGTVDFANLHT 116
Query: 241 MDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQ 300
D+ + L+ ++G+G W+ M +IFSL RPDV+ DL + +G+ LY L++L + +
Sbjct: 117 FQDEEIIKKLSSLHGVGIWTAEMLLIFSLSRPDVVSYRDLAICRGMMNLYGLKDLSKE-K 175
Query: 301 MDQLCEKWRPYRSVASWYLWRF 322
++ +++ PY S+AS YLW+
Sbjct: 176 FERYRKRYSPYGSIASLYLWQL 197
>gi|392577334|gb|EIW70463.1| hypothetical protein TREMEDRAFT_71310 [Tremella mesenterica DSM
1558]
Length = 366
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 99/178 (55%), Gaps = 8/178 (4%)
Query: 128 VEAAIRHLRNADRQLASLIDIHPPPTFDSFHT---PFLALTRSILYQQLAFKAGTSIYTR 184
++ AI HL AD + ++ P + +T PF L SI+ QQ+++ A +I R
Sbjct: 26 LQDAITHLSLADPRFGNMFQHLPCKPYIPPYTAIDPFRTLVTSIIGQQVSWMAARAINGR 85
Query: 185 FIALCG--GEAGV-VPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNM 241
F AL G E G P V A Q L+ +G+S RKA Y+ LA + +G LS + +
Sbjct: 86 FRALFGYEDENGFPSPAQVAATEVQTLKGVGLSTRKAEYVISLAEHFLSGQLSTELLRDG 145
Query: 242 DDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV--QLLYSLEELPR 297
D + L V GIG W+V MF++FSL RPDVLP+ DLGV+KG+ +L + + LPR
Sbjct: 146 SDDQIAKALIAVRGIGQWTVDMFLMFSLKRPDVLPVGDLGVQKGLIRWVLAAHQALPR 203
>gi|397620086|gb|EJK65535.1| hypothetical protein THAOC_13590 [Thalassiosira oceanica]
Length = 327
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 118/230 (51%), Gaps = 31/230 (13%)
Query: 120 RPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPT---------FDSFHTPFLALTRSILY 170
+ LS V+A D +L LI PPT + F +L R+++
Sbjct: 89 KTLSGWCLVDALTHCCCANDGKLLPLIRKAGPPTHFLGGEENMIGDGNDSFRSLCRTVIA 148
Query: 171 QQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQ-----QLRQ-IGVSGRKASYLHDL 224
Q LA KA +I+++ + + G + + P ++A+ + +LR+ +G+S K + + L
Sbjct: 149 QLLADKAARTIHSKLLDVVGSSSNLTPSNIVAIAARGDVENELRKPVGLSNAKCNCILKL 208
Query: 225 ARKYQNGILSDSAIVNMDDKS-LFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVR 283
A +Q+G LSD ++ D+S + L V GIG W+V MFM+FS H P+V PI DL R
Sbjct: 209 AELFQSGTLSDDLLLKTSDESAVRERLIQVKGIGQWTVDMFMLFSRHSPNVFPIGDLAFR 268
Query: 284 KGVQLLYSLEELPRPSQMDQLCEK------------WRPYRSVASWYLWR 321
+G + ++ ++ ++ +LC K + PYRS++++Y+++
Sbjct: 269 RGTKKVFGIKG---SAKGGELCPKKDLQKILDAHAPFHPYRSISAYYMYK 315
>gi|429218990|ref|YP_007180634.1| 3-methyladenine DNA glycosylase [Deinococcus peraridilitoris DSM
19664]
gi|429129853|gb|AFZ66868.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Deinococcus peraridilitoris DSM 19664]
Length = 243
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 109/205 (53%), Gaps = 10/205 (4%)
Query: 124 SEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYT 183
+EG E A R D L +L+ P S F AL IL QQ++ + + +T
Sbjct: 43 AEGLAELAGR-----DPVLRALLAQFGAPPLWSRPPGFAALVLIILEQQVSLASARAAFT 97
Query: 184 RFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDD 243
R A G V PE +LA + LR G++ +K++YL LA NG + + DD
Sbjct: 98 RLQARVGE---VTPEVILA-SADNLRGAGLTRQKSAYLLALAEAVVNGRVDLDGLERQDD 153
Query: 244 KSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQ 303
+ L+ + G+G W+V ++++ +L RPD+LP+ DL + V+ +Y L E P +Q+
Sbjct: 154 AGVREALSGIKGVGPWTVDVYLLLALLRPDILPVGDLALVSSVRRVYGLAERPTRAQLLV 213
Query: 304 LCEKWRPYRSVASWYLWR-FVEAKG 327
+ + WRP+RSVA+ LW +++ +G
Sbjct: 214 MGQSWRPWRSVATRLLWHAYLQERG 238
>gi|46199956|ref|YP_005623.1| DNA-3-methyladenine glycosylase II [Thermus thermophilus HB27]
gi|46197583|gb|AAS81996.1| DNA-3-methyladenine glycosylase II [Thermus thermophilus HB27]
Length = 185
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 86/162 (53%), Gaps = 10/162 (6%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
PF L S++ QQL+ +A + R L P+ L LRQ G+S KA
Sbjct: 29 PFRVLAESVVAQQLSTRAAARLAERLFRLVPP----TPKAFLEAPLDLLRQAGLSRAKAL 84
Query: 220 YLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIND 279
L DLA K + G+L + ++D+++ LT V G+G W+ MF++F L RPDV P+ D
Sbjct: 85 ALKDLAAKAEEGLLD--GLDRLEDEAVVERLTRVRGVGLWTAEMFLMFGLGRPDVWPVRD 142
Query: 280 LGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
LG+R+ L+ + P + E +RPYRS +WYLWR
Sbjct: 143 LGLRRAAARLFGVA----PEALPAFGEAFRPYRSHLAWYLWR 180
>gi|164656014|ref|XP_001729135.1| hypothetical protein MGL_3602 [Malassezia globosa CBS 7966]
gi|159103025|gb|EDP41921.1| hypothetical protein MGL_3602 [Malassezia globosa CBS 7966]
Length = 339
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 113/264 (42%), Gaps = 71/264 (26%)
Query: 128 VEAAIRHLRNADRQLASLIDIHPPPTFDSFHTP-------FLALTRSILYQQLAFKAGTS 180
++ A +HL + D + ASL +D + F LT SIL QQ+++ A S
Sbjct: 72 IQEARQHLCSIDSRFASLFAQLDLKVYDELRSGKVKELNLFRVLTTSILGQQISWLAARS 131
Query: 181 IYTRFIALCGGEAGVVPET---------------VLALTPQQLRQIGVSGRKASYLHDLA 225
I +F L + + P VL T +LR+ G+S K Y+ D+A
Sbjct: 132 IMYKFCRLFAPDLPLQPNLDAVNKDELPFPTPLQVLKATDDELRRAGLSTAKIKYVRDVA 191
Query: 226 RKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKG 285
R++ +G L I++M+ ++ T LT V G+G W+ M ++F+L PD+LP+ DLGV++G
Sbjct: 192 RRFSDGRLDVRKIIHMNPEACITELTQVKGVGRWTAEMLLMFALRSPDILPVGDLGVQRG 251
Query: 286 VQLLY-----------------------------------SLEELPR------------- 297
+ Y SLE+L
Sbjct: 252 IVKFYLSNSAGPKISERKRKDDYVHHDESKAPGFLPSNSLSLEQLVSRSQGNKTKKHMYL 311
Query: 298 -PSQMDQLCEKWRPYRSVASWYLW 320
P +M L W PYRSVA ++W
Sbjct: 312 DPEEMSVLAAPWAPYRSVACMFMW 335
>gi|448746032|ref|ZP_21727702.1| DNA glycosylase [Halomonas titanicae BH1]
gi|445566760|gb|ELY22866.1| DNA glycosylase [Halomonas titanicae BH1]
Length = 208
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 100/211 (47%), Gaps = 13/211 (6%)
Query: 123 SSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIY 182
SS +E A+ L AD +A + + P+ F +I+ QQL+ +A +I
Sbjct: 6 SSFNTIEHAMAELVEADPDIAHALPLVGAPSPRERDKGFATFFSTIVSQQLSTEAARAIM 65
Query: 183 TRFIALCGGEAGVVPE----TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAI 238
R L +PE V+ + Q LR G+S RK Y LA G S +
Sbjct: 66 GRVNTL-------LPELHAKAVMEVEGQALRDAGLSWRKIEYAKGLAEAELAGTFSAVGL 118
Query: 239 VNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRP 298
+ D +T + G G WS ++++FSL RPD+ P +DL +R + L +++ P P
Sbjct: 119 EQLSDDEAIAAITELRGFGRWSAEIYLMFSLQRPDIFPADDLALRVALGRLKGMDDKPTP 178
Query: 299 SQMDQLCEKWRPYRSVASWYLWRFVEAKGAP 329
Q QL E W P+RSV S +LW + +G P
Sbjct: 179 KQARQLVEHWAPWRSVGSLFLWHYY--RGEP 207
>gi|123442759|ref|YP_001006736.1| putative glycosidase [Yersinia enterocolitica subsp. enterocolitica
8081]
gi|420258145|ref|ZP_14760885.1| putative glycosidase [Yersinia enterocolitica subsp. enterocolitica
WA-314]
gi|122089720|emb|CAL12572.1| putative glycosidase [Yersinia enterocolitica subsp. enterocolitica
8081]
gi|404514454|gb|EKA28249.1| putative glycosidase [Yersinia enterocolitica subsp. enterocolitica
WA-314]
Length = 200
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 106/201 (52%), Gaps = 14/201 (6%)
Query: 124 SEGEVEAAIRHLRNADRQLASLID----IHPPPTFDSFHTPFLALTRSILYQQLAFKAGT 179
S GE E I HL+ D+++A+ I+ I P + D F AL R+I+ QQ++ KA
Sbjct: 4 SYGETE--INHLKRRDKKMAAAIERLGMIARPLSPDLFA----ALIRNIVDQQISVKAAL 57
Query: 180 SIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIV 239
++ R + L G V P T+ A + ++ G++ RKA Y+ A +G L SAI
Sbjct: 58 TVNARLLTLVGT---VTPITIAAAPIEAIQGCGMTMRKAGYIKGAANAALDGSLDLSAIS 114
Query: 240 NMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPS 299
+ D + T L+ +NGIG W+ M +I SL RPDVL DL +R+G+ LY + LPR
Sbjct: 115 LLPDNEVITQLSSLNGIGIWTAEMLLISSLSRPDVLSWGDLAIRRGMMNLYRHKTLPRER 174
Query: 300 QMDQLCEKWRPYRSVASWYLW 320
PY + AS YLW
Sbjct: 175 FERYRRRY-TPYGTTASLYLW 194
>gi|400593931|gb|EJP61821.1| HhH-GPD superfamily base excision DNA repair protein [Beauveria
bassiana ARSEF 2860]
Length = 411
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 101/217 (46%), Gaps = 23/217 (10%)
Query: 131 AIRHLRNADRQLASLIDIH-----PPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRF 185
A HL D ++ LI+ H P PF ++T I+ QQ++ A SI +F
Sbjct: 188 ACDHLIRVDERMRPLIEKHTCRVFSPEGLAEEVDPFESITSGIISQQVSGAAAKSIKNKF 247
Query: 186 IALCGG--EAGVVPE----TVLALTP-QQLRQIGVSGRKASYLHDLARKYQNGILSDSAI 238
I L + P + +A TP + LR G+S RKA Y+H LA ++ +G LS +
Sbjct: 248 IMLFAATSDGDATPRFPHPSKVAATPLETLRTAGLSQRKAEYIHGLAARFTSGELSAQML 307
Query: 239 VNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLE----- 293
+ + L V G+G WSV MF F L R DV + DLGV++G+ +
Sbjct: 308 QDAPYDEVLAKLLAVRGLGRWSVEMFACFGLKRMDVFSLGDLGVQRGMAAFAGRDVAKLR 367
Query: 294 ------ELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
+ M + +++ PYRS+ WY+WR E
Sbjct: 368 NKGGKWKYMSEQDMVAMSDRFAPYRSLFMWYMWRVEE 404
>gi|378823317|ref|ZP_09845973.1| base excision DNA repair protein, HhH-GPD family [Sutterella
parvirubra YIT 11816]
gi|378597866|gb|EHY31098.1| base excision DNA repair protein, HhH-GPD family [Sutterella
parvirubra YIT 11816]
Length = 216
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 99/190 (52%), Gaps = 5/190 (2%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A+ HL + D +LA + + PF +L + I+ QQ++ KA +++ R A G
Sbjct: 12 ALDHLASLDDELAHAVRVIGRVERTMEPDPFRSLMKHIVGQQISTKAQEAVWARVTARVG 71
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
V PE V AL ++LR G+S +KA ++ +A K +G A+ D + L
Sbjct: 72 T---VTPEAVAALPEEELRACGMSLKKADWMRAIAVKVASGETDLEALRRAPDAEVVAAL 128
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRP 310
T G+G W+ M MIFS RPDVL I D GVR GV+++Y E + ++ +L + P
Sbjct: 129 TAFAGVGLWTAEMLMIFSYGRPDVLSIGDFGVRHGVRVVYGREMTTK--ELRELKTRVSP 186
Query: 311 YRSVASWYLW 320
+ SVAS W
Sbjct: 187 WGSVASIIFW 196
>gi|303328110|ref|ZP_07358549.1| putative DNA-3-methyladenine glycosylase II [Desulfovibrio sp.
3_1_syn3]
gi|302861936|gb|EFL84871.1| putative DNA-3-methyladenine glycosylase II [Desulfovibrio sp.
3_1_syn3]
Length = 234
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 100/192 (52%), Gaps = 4/192 (2%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
E I HL+ D++LA +I++ P + F AL +I+ QQ+A +A +I+ R A
Sbjct: 9 EQEIAHLKARDKRLAEIIELIGPVRREVVPDLFEALIHAIVGQQIATRAQQTIWARMRA- 67
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
G + P + + L+ G+S RK Y+ A + +G A+ + D +L
Sbjct: 68 --GLGAITPGVIRETSETGLQAFGLSFRKVGYMKAAAERVLSGEFDVEALRTLPDDALCA 125
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
L + G+G W+ M M FSL RPDV+ DL +++G+++LY + R D+ ++
Sbjct: 126 ELARLPGVGVWTAEMLMTFSLQRPDVISYGDLAIQRGLRMLYRHRRVDR-KLFDKYRRRY 184
Query: 309 RPYRSVASWYLW 320
P+ +VAS YLW
Sbjct: 185 APHATVASLYLW 196
>gi|148652307|ref|YP_001279400.1| HhH-GPD family protein [Psychrobacter sp. PRwf-1]
gi|148571391|gb|ABQ93450.1| DNA-3-methyladenine glycosylase II [Psychrobacter sp. PRwf-1]
Length = 231
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 101/196 (51%), Gaps = 18/196 (9%)
Query: 135 LRNADRQLASLIDIHP--PPTFDSFHTP--------FLALTRSILYQQLAFKAGTSIYTR 184
L + + LIDI P P + P F L R+++ QQL+ A +SI+++
Sbjct: 30 LSELEGHIKQLIDIEPRFAPIYQQLGVPSLRRNRGGFRELMRAMVGQQLSVAAASSIWSK 89
Query: 185 FIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDK 244
A + P+ ++ LR G+S +K Y+ L + A+ ++ D+
Sbjct: 90 L----ENAALITPDAIMKADDDTLRSHGLSRQKIRYIRSLVEHD----IDFEALAHLPDE 141
Query: 245 SLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQL 304
++ + LT V GIG W+ M+++FSL R D+L ++DL ++ G + L+E P P Q+++L
Sbjct: 142 AVISELTAVTGIGKWTAQMYLLFSLGRADILAVDDLAIKVGAMEVLGLDERPTPKQLERL 201
Query: 305 CEKWRPYRSVASWYLW 320
+ W P+RS AS LW
Sbjct: 202 TQSWSPHRSAASLLLW 217
>gi|410944080|ref|ZP_11375821.1| DNA-3-methyladenine glycosylase [Gluconobacter frateurii NBRC
101659]
Length = 216
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 94/184 (51%), Gaps = 7/184 (3%)
Query: 155 DSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL--CGGEAGV--VPETVLALTPQQLRQ 210
D P+ AL R+I QQL A I+ R L E G PE +LA + LR
Sbjct: 30 DDGQDPYDALLRAIAGQQLHGAAARRIFGRLCLLGPAASETGPPPAPEVLLAFSEDILRA 89
Query: 211 IGVSGRKASYLHDLARKYQNGIL-SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSL 269
G+S K + +A+ G++ + + D+ L L + G+G W+V M ++F+L
Sbjct: 90 CGLSASKQIAMRGVAQARLEGLVPTRLEAETLGDEELIQRLVTLRGVGRWTVEMLLMFTL 149
Query: 270 HRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE--AKG 327
RPDV+P++D GVR+G + + +E P+P + + P+RS +WY WR E K
Sbjct: 150 GRPDVMPVDDFGVREGWRRIKKMETAPKPKNLKNETFCFSPHRSALAWYCWRVAEEGKKA 209
Query: 328 APSS 331
AP++
Sbjct: 210 APNT 213
>gi|381191527|ref|ZP_09899037.1| DNA-3-methyladenine glycosylase II [Thermus sp. RL]
gi|384430255|ref|YP_005639615.1| HhH-GPD family protein [Thermus thermophilus SG0.5JP17-16]
gi|333965723|gb|AEG32488.1| HhH-GPD family protein [Thermus thermophilus SG0.5JP17-16]
gi|380450887|gb|EIA38501.1| DNA-3-methyladenine glycosylase II [Thermus sp. RL]
Length = 185
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 86/162 (53%), Gaps = 10/162 (6%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
PF L S++ QQL+ +A + R L P+ L LRQ G+S KA
Sbjct: 29 PFRVLAESVVAQQLSTQAAARLAERLFRLVPP----TPKAFLEAPLDLLRQAGLSRAKAL 84
Query: 220 YLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIND 279
L DLA K + G+L + ++D+++ LT V G+G W+ MF++F L RPDV P+ D
Sbjct: 85 ALKDLAAKAEEGLLD--GLDRLEDEAVVERLTRVRGVGLWTAEMFLMFGLGRPDVWPVRD 142
Query: 280 LGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
LG+R+ L+ + P + E +RPYRS +WYLWR
Sbjct: 143 LGLRRAAARLFGVA----PEALPAFGEAFRPYRSHLAWYLWR 180
>gi|456983334|gb|EMG19662.1| base excision DNA repair protein, HhH-GPD family [Leptospira
interrogans serovar Copenhageni str. LT2050]
Length = 185
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 92/176 (52%), Gaps = 1/176 (0%)
Query: 145 LIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALT 204
+ID + TP+ L +S+L QQL+ K + R I+L G + PE +L +
Sbjct: 1 MIDSIGLCKLKTIGTPYQVLIKSVLGQQLSVKVALTFERRLISLVGSKKIPSPEQILKIP 60
Query: 205 PQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMF 264
++R+IGVS K + +A Y ++DS + ++D + +L + G+G W+ M
Sbjct: 61 NDEMRKIGVSQAKTETIKRIAEAYLKRSITDSKLHKLEDSDVLKLLCSIKGVGPWTAEMV 120
Query: 265 MIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLW 320
+IF+L R D INDL +RK V+ Y + + ++ + PYR++ SWYLW
Sbjct: 121 LIFALDRWDHFSINDLILRKSVEKHYGISK-DNKKEIQLFLNTYSPYRTILSWYLW 175
>gi|347752385|ref|YP_004859950.1| HhH-GPD family protein [Bacillus coagulans 36D1]
gi|347584903|gb|AEP01170.1| HhH-GPD family protein [Bacillus coagulans 36D1]
Length = 287
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 101/214 (47%), Gaps = 17/214 (7%)
Query: 128 VEAAIRHLRNADRQLAS------------LIDIHPPPTFDSFHTPFLALTRSILYQQLAF 175
VE I HL ++ +A L H F +P+ L + I++QQL
Sbjct: 74 VEKRIFHLFQWEKDIAGITNHFTGTALEPLFKEHRGTPFVLDFSPYACLIKCIIHQQLNM 133
Query: 176 KAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSGRKASYLHDLARKYQN 230
K ++ RF+ G + V PE AL LR + S RKA Y+ L+R +
Sbjct: 134 KFAHTLTERFVYHFGFQKDGVWFYPSPEKTAALQVADLRALQFSERKAEYVIGLSRLVAS 193
Query: 231 GILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLY 290
L + + D+ + L + GIG W+V F++F L R + P D+G++K ++ L+
Sbjct: 194 SELDLAELEKKPDEEILKTLVKIRGIGPWTVQNFLMFGLGRLNHFPKADIGIQKALKKLF 253
Query: 291 SLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
LE+ P +MD + W PY S AS YLWR +E
Sbjct: 254 QLEKKPTYEEMDAYAKDWEPYLSYASLYLWRSIE 287
>gi|423434089|ref|ZP_17411070.1| hypothetical protein IE9_00270 [Bacillus cereus BAG4X12-1]
gi|401127358|gb|EJQ35084.1| hypothetical protein IE9_00270 [Bacillus cereus BAG4X12-1]
Length = 287
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 105/186 (56%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ HTP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 102 PLFETYAHTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 161
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L R +G L+ ++I N ++ + L + GIG+
Sbjct: 162 IVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIENGTEEDISAQLLPIRGIGA 221
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + +++L ++ PY S A+ Y
Sbjct: 222 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGIFQLDDKPDDAFLEKLKQECEPYCSYAALY 281
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 282 LWKSIE 287
>gi|336371959|gb|EGO00299.1| hypothetical protein SERLA73DRAFT_160226 [Serpula lacrymans var.
lacrymans S7.3]
gi|336384711|gb|EGO25859.1| hypothetical protein SERLADRAFT_415259 [Serpula lacrymans var.
lacrymans S7.9]
Length = 479
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 93/190 (48%), Gaps = 33/190 (17%)
Query: 129 EAAIRHLRNAD---RQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRF 185
E A RHL N D + S + P + H PF AL +SIL QQ+++ A SI RF
Sbjct: 108 EDAKRHLINVDGRFEDIFSKLRCKPYEQLEQVH-PFRALVQSILGQQISWLAARSINHRF 166
Query: 186 IALCG----------GEAGVV------PETVLALTPQQLRQIGVSGRKASY--------- 220
I L EA P V L+ G+S RKA Y
Sbjct: 167 IRLYNPSLPEKATDYNEAKSAASFFPSPSRVAKTDIAVLKSAGLSTRKAEYESNARNPKH 226
Query: 221 ----LHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLP 276
+ DLA ++ +G LS ++ DD+ L MLT V GIG W+V MF +FSL RP++LP
Sbjct: 227 ACTEVQDLAARFSDGRLSTEKLLEADDEELTQMLTEVRGIGKWTVDMFAMFSLRRPNILP 286
Query: 277 INDLGVRKGV 286
+ DLGV++GV
Sbjct: 287 VGDLGVQRGV 296
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 246 LFT--MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQ 303
LFT + +N + + H + L P+ L + +L R G + L P++M+
Sbjct: 400 LFTPSISKTLNDVQKATSHASALMPL--PEGLTVAELKTRLGGKKKIK-GALLTPNEMEA 456
Query: 304 LCEKWRPYRSVASWYLWRFVEAK 326
L E W+PYRS+ +Y+W E K
Sbjct: 457 LTETWKPYRSLGVYYMWSLAEDK 479
>gi|325289647|ref|YP_004265828.1| DNA-3-methyladenine glycosylase II [Syntrophobotulus glycolicus DSM
8271]
gi|324965048|gb|ADY55827.1| DNA-3-methyladenine glycosylase II [Syntrophobotulus glycolicus DSM
8271]
Length = 231
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 12/196 (6%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTR---- 184
E I +LR+ D L ID F+AL +I+ QQ++ KA +I+ R
Sbjct: 11 EKEIAYLRSRDPLLGVAIDEIGQIERVVIPDLFMALVNTIVGQQISTKAQATIWARMREQ 70
Query: 185 FIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDK 244
F+ L PE + T ++LR G+S RKASY+ ++A NG L + + + D
Sbjct: 71 FVPL-------TPEIIGTATAEELRTCGISLRKASYIKEIAGSVLNGSLDLAHLQTLPDD 123
Query: 245 SLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQL 304
+ L+ + GIG W+ M M FS+ RPDV+ DL + +G+++LY ++ P +
Sbjct: 124 EVCLYLSQIKGIGVWTAEMLMTFSMQRPDVMSAGDLAILRGLRMLYHHRKIT-PKLFARY 182
Query: 305 CEKWRPYRSVASWYLW 320
++ PY +VAS YLW
Sbjct: 183 KRRYSPYATVASLYLW 198
>gi|392970484|ref|ZP_10335889.1| DNA-3-methyladenine glycosylase [Staphylococcus equorum subsp.
equorum Mu2]
gi|392511524|emb|CCI59108.1| DNA-3-methyladenine glycosylase [Staphylococcus equorum subsp.
equorum Mu2]
Length = 221
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 90/165 (54%), Gaps = 2/165 (1%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P +L RSI+ QQ+ K SI+ + E V + + + Q++ G+S K +
Sbjct: 45 PLKSLIRSIIGQQITVKVAASIFEQLTDAINDEWTV--DKLSEIEDTQMKSFGLSKSKIN 102
Query: 220 YLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIND 279
Y+H+L Q+G L + + + + LT V GIG W+ +F++F+L RPDV+P++D
Sbjct: 103 YIHNLVTHIQHGKLDLENLHKLSNDEVIRTLTEVKGIGQWTAEVFLLFTLQRPDVVPVHD 162
Query: 280 LGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
+G+++ Q LY + R +Q+ E+W+ S+ ++YLW +
Sbjct: 163 VGLQRSAQWLYGTTKAQRKAQLALCSERWKHCASIGAFYLWEAIH 207
>gi|403045546|ref|ZP_10901022.1| DNA-3-methyladenine glycosidase [Staphylococcus sp. OJ82]
gi|402764367|gb|EJX18453.1| DNA-3-methyladenine glycosidase [Staphylococcus sp. OJ82]
Length = 217
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 90/165 (54%), Gaps = 2/165 (1%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
P +L RSI+ QQ+ K SI+ + E V + + + Q++ G+S K +
Sbjct: 41 PLKSLIRSIIGQQITVKVAASIFEQLTDAINDEWTV--DKLSEIEDTQMKSFGLSKSKIN 98
Query: 220 YLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIND 279
Y+H+L Q+G L + + + + LT V GIG W+ +F++F+L RPDV+P++D
Sbjct: 99 YIHNLVTHIQHGKLDLENLHKLSNDEVIRTLTEVKGIGQWTAEVFLLFTLQRPDVVPVHD 158
Query: 280 LGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
+G+++ Q LY + R +Q+ E+W+ S+ ++YLW +
Sbjct: 159 VGLQRSAQWLYGTTKAQRKAQLALCSERWKHCASIGAFYLWEAIH 203
>gi|255015545|ref|ZP_05287671.1| HhH-GPD family protein [Bacteroides sp. 2_1_7]
gi|410101426|ref|ZP_11296355.1| hypothetical protein HMPREF0999_00127 [Parabacteroides sp. D25]
gi|409240252|gb|EKN33033.1| hypothetical protein HMPREF0999_00127 [Parabacteroides sp. D25]
Length = 222
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 106/196 (54%), Gaps = 12/196 (6%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
E + +L++ D++LA +ID F AL SI+ QQ++ +A +I+ + +
Sbjct: 9 EKELSYLKSKDKRLAEVIDKVGMVKRRVIPDLFAALVHSIVGQQISTRAHETIWQKLLTH 68
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
G + P + ++ ++L++ G++ RKA Y+ ARK +G + M D +
Sbjct: 69 FGT---ITPAAIASIPREELQRFGITFRKADYIQSAARKIISGEFDIKELHGMADAEVCN 125
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
L+ ++GIG W+ M M+ SL RPD+L DL +++G+++LY ++ R +L EK+
Sbjct: 126 RLSALDGIGIWTAEMMMLHSLQRPDILSFGDLAMQRGLRMLYHHRKITR-----KLFEKY 180
Query: 309 R----PYRSVASWYLW 320
R PY SVA YLW
Sbjct: 181 RRRYSPYGSVACIYLW 196
>gi|345891263|ref|ZP_08842113.1| hypothetical protein HMPREF1022_00773 [Desulfovibrio sp.
6_1_46AFAA]
gi|345048405|gb|EGW52240.1| hypothetical protein HMPREF1022_00773 [Desulfovibrio sp.
6_1_46AFAA]
Length = 234
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 100/192 (52%), Gaps = 4/192 (2%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
E I HL+ D++LA +I++ P + F AL +I+ QQ+A +A +I+ R A
Sbjct: 9 EQEIAHLKARDKRLAEIIELIGPVRREVVPDLFEALIHAIVGQQIATRAQQTIWARMRA- 67
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
G + P + + L+ G+S RK Y+ A + +G A+ + D +L
Sbjct: 68 --GLGAITPGVIRETSETGLQAFGLSFRKVGYMKAAAERVLSGEFDVEALRTLPDNALCA 125
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
L + G+G W+ M M FSL RPDV+ DL +++G+++LY + R D+ ++
Sbjct: 126 ELARLPGVGVWTAEMLMTFSLQRPDVISYGDLAIQRGLRMLYRHRRVDR-KLFDKYRRRY 184
Query: 309 RPYRSVASWYLW 320
P+ +VAS YLW
Sbjct: 185 APHATVASLYLW 196
>gi|302500252|ref|XP_003012120.1| hypothetical protein ARB_01628 [Arthroderma benhamiae CBS 112371]
gi|291175676|gb|EFE31480.1| hypothetical protein ARB_01628 [Arthroderma benhamiae CBS 112371]
Length = 398
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 109/246 (44%), Gaps = 48/246 (19%)
Query: 125 EGEVEAAIRHLRNADRQLASLIDIHP-----PPTFDSFHTPFLALTRSILYQQLAFKAGT 179
E + AI HL + D +L +ID P P PF AL I+ QQ++ A
Sbjct: 143 ENLLTEAIAHLLSVDPRLKPVIDKFPDAPFRPADLAVEIDPFQALVSGIIGQQVSGAAAK 202
Query: 180 SIYTRFIALCGGE-----------------------AGV--------VPETVLALTPQQL 208
SI ++FI+L AG+ P+ V+++ L
Sbjct: 203 SIKSKFISLFSATTTTTTTTDTQVEADGDDEDEVGDAGLRYKPVPFPSPQQVVSMDIPTL 262
Query: 209 RQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFS 268
R G+S RKA Y+H LA K+ +G LS ++ D+ + L V G+G WSV MF++F
Sbjct: 263 RTAGLSQRKAEYIHGLADKFASGELSARMLLTASDEEVLDKLIAVRGLGKWSVEMFLLFG 322
Query: 269 LHRPDVLPINDLGVRKGVQLLYSLE------------ELPRPSQMDQLCEKWRPYRSVAS 316
L R DV DLGV++G+ + + M ++ + PYRS+
Sbjct: 323 LKRMDVFSTGDLGVQRGMAAFAGRDVSKLKAKGGGKFKYMSEKDMVEIAAPFSPYRSLFM 382
Query: 317 WYLWRF 322
WY+WR+
Sbjct: 383 WYMWRW 388
>gi|345005167|ref|YP_004808020.1| HhH-GPD family protein [halophilic archaeon DL31]
gi|344320793|gb|AEN05647.1| HhH-GPD family protein [halophilic archaeon DL31]
Length = 217
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 97/197 (49%), Gaps = 12/197 (6%)
Query: 134 HLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEA 193
HLR DR L L+ D F L SI+ QQ++ + + R
Sbjct: 15 HLRE-DRYLGPLVAEFGELCLDPEDDAFRRLVASIISQQVSTASAAATRERLFEAVEP-- 71
Query: 194 GVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMV 253
PE + A L++ G+S +K Y++ +A ++ + + M + + LT +
Sbjct: 72 --TPEGIRAADEATLKEAGLSRQKTRYVNAVADRFHEEGWTRESFEPMSNDEVRAALTDI 129
Query: 254 NGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYS------LEELPRPSQMDQLCEK 307
G+G W+ MF++F+L RPDV P+ DLGVRKG+Q L S E + R ++M E+
Sbjct: 130 TGVGEWTADMFLLFALGRPDVFPVGDLGVRKGLQTLLSPYDDHDAENMTR-AEMRVFAER 188
Query: 308 WRPYRSVASWYLWRFVE 324
W+P RS A+ YLWR E
Sbjct: 189 WKPARSYAALYLWRVNE 205
>gi|396461943|ref|XP_003835583.1| similar to DNA-3-methyladenine glycosylase [Leptosphaeria maculans
JN3]
gi|312212134|emb|CBX92218.1| similar to DNA-3-methyladenine glycosylase [Leptosphaeria maculans
JN3]
Length = 346
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 83/161 (51%), Gaps = 7/161 (4%)
Query: 134 HLRNADRQLASLIDIH-----PPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
HL D +L L++ H P PF L++ I+ QQ++ +A TSI +F +L
Sbjct: 172 HLIRTDERLRVLVEKHRCEMFSPEGLKEVIDPFTELSKGIIGQQVSGQAATSIRQKFTSL 231
Query: 189 --CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSL 246
+ P VLAL LR G+S RKA Y+H LA K+ +G LS + +V D+ L
Sbjct: 232 FPTTHPSFPSPSQVLALDLPTLRTAGLSQRKAEYIHGLAGKFASGELSAAMLVGASDEEL 291
Query: 247 FTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQ 287
L V G+G WSV MF F L R DV DLGV++G
Sbjct: 292 VERLVAVRGLGRWSVEMFACFGLKRMDVFSTGDLGVQQGAH 332
>gi|416991622|ref|ZP_11938766.1| DNA-3-methyladenine glycosylase II, partial [Burkholderia sp.
TJI49]
gi|325518593|gb|EGC98256.1| DNA-3-methyladenine glycosylase II [Burkholderia sp. TJI49]
Length = 134
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 80/134 (59%)
Query: 197 PETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGI 256
P+ V+ L +L G+S RK Y+ DLA+ + +G L +MDD+ + LT + GI
Sbjct: 1 PQPVIRLGADKLIACGLSKRKTEYILDLAQHFVSGALHVDKWTSMDDEDVIAELTQIRGI 60
Query: 257 GSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVAS 316
W+ MF+IF+L RPDVLP++D G+ + + + Y E S+ ++ W P+R+VA+
Sbjct: 61 SRWTAEMFLIFNLSRPDVLPLDDPGLIRAISVNYFSGEPVTRSEAREVAANWEPWRTVAT 120
Query: 317 WYLWRFVEAKGAPS 330
WY+WR ++A A +
Sbjct: 121 WYMWRSLDALDADA 134
>gi|91762686|ref|ZP_01264651.1| DNA-3-methyladenine glycosylase I [Candidatus Pelagibacter ubique
HTCC1002]
gi|91718488|gb|EAS85138.1| DNA-3-methyladenine glycosylase I [Candidatus Pelagibacter ubique
HTCC1002]
Length = 211
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 107/197 (54%), Gaps = 5/197 (2%)
Query: 131 AIRHLRNADRQLASLIDIHPPPT---FDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIA 187
A ++L N D+ ++SLI+ + P+ S F +L +SI+ QQ++ A S++
Sbjct: 11 AKKYLSNKDKVMSSLINKYKSPSEAVLTSRKDIFFSLCKSIIGQQISVAAANSVF--LKF 68
Query: 188 LCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLF 247
+ + +TV L+ QL+ G+SG+K + LA++ + + I M D+
Sbjct: 69 KKKCKNKINAKTVSKLSSVQLKSCGLSGQKVKGIKSLAKQILDKSFNPRLIPKMSDEEAI 128
Query: 248 TMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEK 307
L+ + IG WS M ++F+ +R ++ PI D+G+ +G+ Y + LP S + L ++
Sbjct: 129 IYLSQLRQIGRWSAEMILLFTYNRSNIWPIQDIGLLRGISKNYKKKYLPPESYVKLLNKR 188
Query: 308 WRPYRSVASWYLWRFVE 324
+ PY SVA+WYLWR ++
Sbjct: 189 FSPYCSVATWYLWRSID 205
>gi|294084258|ref|YP_003551016.1| hypothetical protein [Candidatus Puniceispirillum marinum IMCC1322]
gi|292663831|gb|ADE38932.1| HhH-GPD [Candidatus Puniceispirillum marinum IMCC1322]
Length = 219
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 98/193 (50%), Gaps = 4/193 (2%)
Query: 130 AAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALC 189
AI L D +A +I + PP S F L R+I+ QQ++ A TSI+ R A
Sbjct: 18 GAIDQLSAIDADVADVIKQYGPPPDRSLPANFDTLARAIVGQQISRAAATSIWNRMEANG 77
Query: 190 GGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTM 249
E V+ +P L ++G+S RKA Y+ +A + + + + +D +++
Sbjct: 78 VSEVDVIATK----SPDDLAELGLSRRKAEYIIGIADEIVSKRIDLHELATLDGQAVQDR 133
Query: 250 LTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWR 309
L + GIG+W+ F +F+L D P+ND+ +++G++ L L P+ +M+ L E WR
Sbjct: 134 LVQIRGIGAWTADNFRLFALGDMDAWPVNDIALQEGMKRLKKLSHRPKAPEMETLGEAWR 193
Query: 310 PYRSVASWYLWRF 322
PYR + LW
Sbjct: 194 PYRGAGALVLWHL 206
>gi|381206856|ref|ZP_09913927.1| HhH-GPD [SAR324 cluster bacterium JCVI-SC AAA005]
Length = 207
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 107/203 (52%), Gaps = 6/203 (2%)
Query: 124 SEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYT 183
SE E +++L +D L +I P D F +L R I QQL+ A ++I+
Sbjct: 2 SELNFEEGLKYLSESDEILRRVIGNLRPKKPDQREPNFESLIRIIAGQQLSSAAASTIFQ 61
Query: 184 RFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQN--GILSDSAIVNM 241
R + G+ + PE ++ ++ + G+S K Y+ +A+++++ ++ D ++ M
Sbjct: 62 RLKSRYTGQT-ITPEMIITTFSAEILECGLSKPKVRYILQIAQEFKDQPNLIED--LIRM 118
Query: 242 DDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQM 301
+ + + L GIG WS +F +F LH PD+ D+ ++K ++LLY + L +
Sbjct: 119 NSEQILQTLQKFKGIGIWSASIFALFYLHHPDIFAWGDVSIKKAIKLLYEEQNL-NEKRT 177
Query: 302 DQLCEKWRPYRSVASWYLWRFVE 324
+++ E WRPYRS A LWR+++
Sbjct: 178 EEIIEPWRPYRSTACLVLWRWID 200
>gi|367026065|ref|XP_003662317.1| hypothetical protein MYCTH_2302825 [Myceliophthora thermophila ATCC
42464]
gi|347009585|gb|AEO57072.1| hypothetical protein MYCTH_2302825 [Myceliophthora thermophila ATCC
42464]
Length = 420
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 107/256 (41%), Gaps = 59/256 (23%)
Query: 128 VEAAIRHLRNADRQLASLIDIH-----PPPTFDSFHTPFLALTRSILYQQLAFKAGTSIY 182
+E A HL D ++ LI+ H P PF +L SI+ QQ++ A SI
Sbjct: 157 LEEACAHLIKVDPRMKPLIEKHYCRIFSPEGLAEQIDPFESLCSSIISQQVSGAAAKSIK 216
Query: 183 TRFIALCGGEAGVV----------------------------------------PETVLA 202
RFIAL P+ V A
Sbjct: 217 ARFIALFNNSNNGGGSNDSSDNDNNNSHTAGAGADGVDGVDGVDGPAVAATFPSPDEVAA 276
Query: 203 LTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVH 262
+ ++LR G+S RKA Y+ LA K+ G L+ + + + + LT V G+G W+V
Sbjct: 277 MPLERLRTAGLSQRKAEYIQGLAAKFATGELTAQMLADAPYEEVLERLTAVRGLGRWTVE 336
Query: 263 MFMIFSLHRPDVLPINDLGVRKGVQLLYSLE--------------ELPRPSQMDQLCEKW 308
MF F+L R DV DLGV++G+ + + +M+++ +++
Sbjct: 337 MFACFALKRMDVFSTGDLGVQRGMAAFVGRDVGRLKAKGGGGGKWKYMSEREMEEISDRF 396
Query: 309 RPYRSVASWYLWRFVE 324
RPYRS+ WY+WR E
Sbjct: 397 RPYRSLFMWYMWRVEE 412
>gi|448630092|ref|ZP_21672853.1| DNA-3-methyladenine glycosylase [Haloarcula vallismortis ATCC
29715]
gi|445756724|gb|EMA08086.1| DNA-3-methyladenine glycosylase [Haloarcula vallismortis ATCC
29715]
Length = 203
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 95/185 (51%), Gaps = 8/185 (4%)
Query: 138 ADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTR-FIALCGGEAGVV 196
AD + +L++ H T D F L SIL QQ++ + + R F A+ V
Sbjct: 11 ADPDIGTLVENHGELTLDPASDLFERLVVSILRQQVSMASAAATRERLFDAVT-----VT 65
Query: 197 PETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGI 256
P + + LR G+S +K Y++++A + S A + D+ + LT + G+
Sbjct: 66 PAGIREADNELLRDAGLSRQKTRYVNEVADTFLEENYSLEAFADATDEEIREALTAITGV 125
Query: 257 GSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVAS 316
G W+ +M ++F+ R DV P+ DLG+RKG + + E ++M + E+W PYRS AS
Sbjct: 126 GDWTANMQLLFAFGREDVFPVGDLGIRKGFEAVVG--EGYSRAEMREYAERWSPYRSYAS 183
Query: 317 WYLWR 321
YLWR
Sbjct: 184 LYLWR 188
>gi|389571381|ref|ZP_10161477.1| DNA-3-methyladenine glycosylase II [Bacillus sp. M 2-6]
gi|388428942|gb|EIL86731.1| DNA-3-methyladenine glycosylase II [Bacillus sp. M 2-6]
Length = 289
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 117/238 (49%), Gaps = 9/238 (3%)
Query: 93 KATSAKSTKSRAIQQQQQTLTVPRIIARPLSSEGEVEAAIRHLRNADRQLASLIDIH-PP 151
+AT K S +Q + + R E ++ A H A LA + + H
Sbjct: 52 QATGTKEAPSFRVQANGPEEAILSEVKRIFGMEHQLHAVHEHF--AQTNLAPIFERHIGT 109
Query: 152 PTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEA-GV----VPETVLALTPQ 206
P FH + L + I++QQL + RF+ G + GV +PET+ +L
Sbjct: 110 PLMLDFHL-YHCLMKCIIHQQLNLAFAYELTKRFVHTYGEQIDGVWFDPLPETIASLETD 168
Query: 207 QLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMI 266
LR++ S RKA Y+ D++++ +G L+ + ++ D + L + GIG W+V ++
Sbjct: 169 DLRKLQFSQRKAEYVIDVSKRIVSGSLNLEELHDLTDIEIEERLLPIRGIGPWTVQNVLM 228
Query: 267 FSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
L RP++ P+ D+G++ ++ + L + P +M L ++W PY S AS YLWR +E
Sbjct: 229 NGLGRPNLFPMADIGIQNAIKRHFDLPKKPTKEEMAVLSKEWAPYLSYASLYLWRSIE 286
>gi|452973076|gb|EME72901.1| DNA-glycosylase YfjP [Bacillus sonorensis L12]
Length = 287
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 100/189 (52%), Gaps = 7/189 (3%)
Query: 142 LASLIDIHP-PPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEA-GV---- 195
L+ L + H P FH + L + I++QQL ++ RF+ G + GV
Sbjct: 100 LSQLFEEHAGTPLVLDFHL-YHCLMKCIIHQQLNLSFAYTLTERFVHAFGEQKDGVWFYP 158
Query: 196 VPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNG 255
+PET+ L LR + S RK+ Y+ D +R G L + ++ D+ + L + G
Sbjct: 159 LPETIAGLDYADLRALQFSMRKSEYVIDTSRMIAEGGLKLDELGSLTDEDIMEKLVKIRG 218
Query: 256 IGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVA 315
IG W+V ++F L RP++ P+ D+G++ ++ + L++ P +M ++ +W+PY S A
Sbjct: 219 IGPWTVQNVLLFGLGRPNLFPMADIGIQNAIKRHFGLKDKPTKEEMLEMSREWQPYLSYA 278
Query: 316 SWYLWRFVE 324
S YLWR +E
Sbjct: 279 SLYLWRSIE 287
>gi|15807566|ref|NP_296303.1| DNA-3-methyladenine glycosidase II [Deinococcus radiodurans R1]
gi|329665899|pdb|2YG9|A Chain A, Structure Of An Unusual 3-Methyladenine Dna Glycosylase Ii
( Alka) From Deinococcus Radiodurans
gi|329665900|pdb|2YG9|B Chain B, Structure Of An Unusual 3-Methyladenine Dna Glycosylase Ii
( Alka) From Deinococcus Radiodurans
gi|6460411|gb|AAF12123.1|AE002087_6 DNA-3-methyladenine glycosidase II, putative [Deinococcus
radiodurans R1]
Length = 225
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 92/173 (53%), Gaps = 12/173 (6%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
PF L RS+ QQL+ KA +IY R L GG VVP +L ++ LR +G+S K
Sbjct: 61 PFGRLVRSVAGQQLSVKAAQAIYGRLEGLPGG---VVPAALLKVSGDDLRGVGLSWAKVR 117
Query: 220 YLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIND 279
+ A +G + + + D+ + L + GIG W+ MF++F+L RPDV D
Sbjct: 118 TVQAAAAAAVSGQIDFAHLSGQPDELVIAELVQLPGIGRWTAEMFLLFALARPDVFSSGD 177
Query: 280 LGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLW---RFVEAKGAP 329
L +R+GV+ LY E+ + +W PYRS+AS YLW ++A GAP
Sbjct: 178 LALRQGVERLYPGED------WRDVTARWAPYRSLASRYLWANSARMQAGGAP 224
>gi|456358955|dbj|BAM93329.1| putative DNA-3-methyladenine glycosylase II [Sphingomonas sp. KSM1]
Length = 209
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 85/157 (54%), Gaps = 3/157 (1%)
Query: 164 LTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHD 223
L R+I+ QQ++ A SI+ + A G G+ PE + + + LR G+S +KASY
Sbjct: 46 LLRTIVGQQVSVAAAASIWRKLEAAVG--TGIAPEALTDASDEALRGAGLSRQKASYAKS 103
Query: 224 LARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVR 283
LA + +G L D + DD+ LT + GIG WS ++++F+ RPD+ P DL V+
Sbjct: 104 LAEEVTSGRL-DLHALPADDEDAIQALTAIKGIGRWSAEIYLLFAEGRPDMWPAGDLAVQ 162
Query: 284 KGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLW 320
+ + LEE P L E WRP+R A+ +LW
Sbjct: 163 IALGRIKGLEERPSEKLTRTLAEGWRPHRGAAAIFLW 199
>gi|331241158|ref|XP_003333228.1| hypothetical protein PGTG_14148 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312218|gb|EFP88809.1| hypothetical protein PGTG_14148 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 352
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 145/365 (39%), Gaps = 104/365 (28%)
Query: 29 STTALAVIPVQTE-TANNATITHANVTPQTSSPPSKIPLRPRKIRKLSPDNGVDQASSSQ 87
STT A+ QT+ +A++A +T + QT+ P RPRK R ASS
Sbjct: 10 STTRKAIAEAQTKLSASSAKLT----SKQTAGPLEDEERRPRKKR----SKARVGASSQD 61
Query: 88 PTESSKATSAKSTKSRAIQQQQQTLTVPRIIARPLSSEGEVEAAIRHLRNADRQLASLID 147
+S K S T+ + + Q HL D + + L
Sbjct: 62 DGQSLKTASQDPTRPFVLSEAQA-----------------------HLAALDDRFSLLFG 98
Query: 148 IHPPPTFDSFHT--------PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEA--GVVP 197
P FD+ PF L SIL QQ++ A SI +FI L E + P
Sbjct: 99 RLPCGPFDNLSKSSIDQVAEPFRNLCCSILGQQVSCLAARSITYKFIKLFQPELPPKLEP 158
Query: 198 ET------------VLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKS 245
T VL LR G+S RKA Y+HDLA+++ + L A++ M+ +
Sbjct: 159 NTRPSEFQFPSPSDVLHTPVLTLRTAGLSQRKAEYIHDLAQRFVDRRLDPQALLTMEPRM 218
Query: 246 LFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLY--------------- 290
+ L V GIG W+ MF+IF + PD+LP DL ++KG+ Y
Sbjct: 219 VVNELCKVRGIGRWTAEMFLIFCVKHPDILPHADLAIQKGILRWYTTALLPLKAEEGRGS 278
Query: 291 ----------------------SLEELPR-------------PSQMDQLCEKWRPYRSVA 315
S +EL R P +M+QL E+W+PYRS+
Sbjct: 279 KKEAEEGNAGLSTPPIPVGCPLSRQELSRRLTKPLKPGLFLTPLEMEQLTEQWKPYRSLP 338
Query: 316 SWYLW 320
Y+W
Sbjct: 339 VCYMW 343
>gi|384918971|ref|ZP_10019035.1| HhH-GPD [Citreicella sp. 357]
gi|384467165|gb|EIE51646.1| HhH-GPD [Citreicella sp. 357]
Length = 209
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 107/207 (51%), Gaps = 10/207 (4%)
Query: 117 IIARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFK 176
+I R + +E V LR A+ + A +D+ P F L +I+ QQ++
Sbjct: 1 MIGRIIETEACVAEGAAWLRRAEPRFARALDLTGPLPLRRRPDGFAQLLSAIVSQQVSVA 60
Query: 177 AGTSIYTRFIALCGGEAGVV-PETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSD 235
+ +I+ R A AG+V P VLA + ++LR +G+S +KASY LA GI D
Sbjct: 61 SARAIWARLEA-----AGMVAPAPVLAASEEELRSLGLSRQKASYARALA---GAGIDFD 112
Query: 236 SAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEEL 295
A+ + + L V GIG W+ ++ +FSL R DV DL +++ V+LL+ L E
Sbjct: 113 -ALRGAPTDDVISTLVAVKGIGIWTAEIYAMFSLGRADVFAPGDLALQEAVRLLFDLPER 171
Query: 296 PRPSQMDQLCEKWRPYRSVASWYLWRF 322
PR + + E W P+RSVA+ LW +
Sbjct: 172 PRDKALRTMAEAWSPWRSVAARALWAY 198
>gi|340914991|gb|EGS18332.1| hypothetical protein CTHT_0063560 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 374
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 98/199 (49%), Gaps = 35/199 (17%)
Query: 123 SSEGEVEAAIRHLRNADRQLASLIDIHP-----PPTFDSFHTPFLALTRSILYQQLAFKA 177
++E ++ A+ HL + + +L LID +P P F PF AL SI+ QQ++ A
Sbjct: 152 TTENILQKAVDHLISVEPRLKPLIDKYPCRLFSPEGFAEQVDPFEALASSIIAQQVSGAA 211
Query: 178 GTSIYTRFIAL-----CGGEAGV-------------------------VPETVLALTPQQ 207
SI +FIAL G+A P V A +
Sbjct: 212 AKSIKAKFIALFKPSNSDGDASQPQLWDEDQAQPPSQSQQPFLSRYFPSPAQVAATPLET 271
Query: 208 LRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIF 267
LR G+S RKA YLH L++ + +G LS + + + D+ L T+LT + GIG W+ MF +F
Sbjct: 272 LRTAGLSQRKAEYLHSLSQAFLSGTLSTTTLASAPDEELITLLTSLRGIGRWTAEMFAVF 331
Query: 268 SLHRPDVLPINDLGVRKGV 286
+L R DV DLGV++G+
Sbjct: 332 ALKRMDVFSTGDLGVQRGL 350
>gi|392570360|gb|EIW63533.1| DNA glycosylase [Trametes versicolor FP-101664 SS1]
Length = 451
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 90/175 (51%), Gaps = 18/175 (10%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFH--TPFLALTRSILYQQLAFKAGTSIYTRFI 186
E A RHL D + + F+ PF L SIL QQ+++KA SI +F+
Sbjct: 101 EEARRHLVRVDPRFEDVFRRVKCRPFEHLERVDPFRTLAHSILGQQISWKAAASITHKFV 160
Query: 187 AL--------CGGEAGVVPETVLALTPQ--QLRQIGVSGRKASYLHDLARKYQNGILSDS 236
L C G + P +T LR G+SGRKA Y+ DLA ++ +G LS
Sbjct: 161 RLFDPSLPETCPGRSNFFPSAHQVITKDIATLRSAGLSGRKAEYVLDLAGRFADGRLSTR 220
Query: 237 AIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN-----DLGVRKGV 286
++ DD+ L+ ML V GIG + MF +FSL RPD+LP+ DLGV+KG+
Sbjct: 221 KLLLADDEELYKMLIEVRGIGR-VIDMFAMFSLRRPDILPVGKSSRWDLGVQKGM 274
>gi|238788336|ref|ZP_04632130.1| Methylated-DNA--protein-cysteine methyltransferase [Yersinia
frederiksenii ATCC 33641]
gi|238723582|gb|EEQ15228.1| Methylated-DNA--protein-cysteine methyltransferase [Yersinia
frederiksenii ATCC 33641]
Length = 202
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 106/201 (52%), Gaps = 14/201 (6%)
Query: 124 SEGEVEAAIRHLRNADRQLASLID----IHPPPTFDSFHTPFLALTRSILYQQLAFKAGT 179
S GE E I HL+ D+++A+ ID I P + D F AL R+I+ QQ++ KA
Sbjct: 4 SYGETE--INHLKRRDKKMAAAIDRLGMIARPLSPDLFA----ALIRNIVDQQISVKAAL 57
Query: 180 SIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIV 239
++ R + L G V P + A + + ++ G++ RKA Y+ A NG L SAI
Sbjct: 58 TVNARLMTLLGA---VTPMAIAAASIEAIQGCGMTMRKAGYIKGTADAVLNGSLDLSAIS 114
Query: 240 NMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPS 299
+ D + T L+ +NG+G W+ M +I SL RPDV+ DL +R+G+ LY + LPR
Sbjct: 115 QLPDNEVITQLSNLNGVGIWTAEMLLISSLSRPDVVSWGDLAIRRGMMNLYRHKTLPRER 174
Query: 300 QMDQLCEKWRPYRSVASWYLW 320
PY + AS YLW
Sbjct: 175 FERYRRRY-TPYGTTASLYLW 194
>gi|238764894|ref|ZP_04625834.1| Methylated-DNA--protein-cysteine methyltransferase [Yersinia
kristensenii ATCC 33638]
gi|238696913|gb|EEP89690.1| Methylated-DNA--protein-cysteine methyltransferase [Yersinia
kristensenii ATCC 33638]
Length = 202
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 104/199 (52%), Gaps = 14/199 (7%)
Query: 126 GEVEAAIRHLRNADRQLASLID----IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSI 181
GE E I HL+ D+++A I+ I P + D F AL R+I+ QQ++ KA ++
Sbjct: 6 GETE--INHLKQRDKKMAVAIERIGMIARPLSPDLFA----ALIRNIVDQQISVKAALTV 59
Query: 182 YTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNM 241
R + L G V P TV A + ++ G++ RKA Y+ A +G L SAI +
Sbjct: 60 NARLLTLLGS---VTPLTVAATAIETIQGCGMTMRKAGYIKGAADAALSGSLDLSAISQL 116
Query: 242 DDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQM 301
D + + L+ +NG+G W+ M +I SL RPD+L DL +R+G+ LY + LPR
Sbjct: 117 PDNEVISQLSNLNGVGIWTAEMLLISSLSRPDILSWGDLAIRRGMMNLYRHKTLPRERFE 176
Query: 302 DQLCEKWRPYRSVASWYLW 320
PY + AS YLW
Sbjct: 177 RYRRRY-APYGTTASLYLW 194
>gi|336396066|ref|ZP_08577465.1| HhH-GPD family protein [Lactobacillus farciminis KCTC 3681]
Length = 216
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 95/193 (49%), Gaps = 7/193 (3%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
++++L D+ LA +I + P + + L I+ Q L+ K + R C
Sbjct: 13 SVQYLIKKDKHLAKVIQMVGPINYQLQTDAYAFLVSQIIEQMLSKKVAQVLTLRLTNECD 72
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDL--ARKYQNGILSDSAIVNMDDKSLFT 248
G + P + L+ +QL IG+S K Y+ +L A + I SD + M D +
Sbjct: 73 GL--ICPTKIKCLSDEQLLSIGISHSKVHYIQNLTAAILTKKVIFSDYS--KMSDSEVID 128
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GIG WS MF+IFSL RPD+LP D+ + +Y + + M + C KW
Sbjct: 129 SLTTIKGIGVWSAKMFLIFSLDRPDILPFEDVAFLQSYSWVYKTHNFKKAAVMKK-CSKW 187
Query: 309 RPYRSVASWYLWR 321
PY S+AS Y+++
Sbjct: 188 HPYASIASRYMYQ 200
>gi|443643195|ref|ZP_21127045.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae pv.
syringae B64]
gi|443283212|gb|ELS42217.1| DNA-3-methyladenine glycosylase II [Pseudomonas syringae pv.
syringae B64]
Length = 203
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 105/189 (55%), Gaps = 14/189 (7%)
Query: 144 SLID-----IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGV--- 195
SLID +HP + PF AL +++ YQQL +AG ++ R AL ++
Sbjct: 5 SLIDHVGSCLHP---VSAAQDPFQALVKAVAYQQLHARAGDAMVRRLRALFLDDSLAEVS 61
Query: 196 --VPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSD-SAIVNMDDKSLFTMLTM 252
+ ++ L Q LR G S K + +A +G++ + SA + M +++L L
Sbjct: 62 FPGAQALVDLDDQALRSCGFSASKCRAIKAIAAARLDGLVPEVSAALAMGNEALVERLIQ 121
Query: 253 VNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYR 312
+ G+G W+V M +I+ L + DV+P +D GV +G + LY+L+ P QM +L E++ PYR
Sbjct: 122 LPGVGRWTVEMMLIYGLGQLDVMPASDFGVCEGYRRLYALQLKPSHRQMARLAERFAPYR 181
Query: 313 SVASWYLWR 321
++A+WYLWR
Sbjct: 182 TIAAWYLWR 190
>gi|237799367|ref|ZP_04587828.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331022223|gb|EGI02280.1| DNA-3-methyladenine glycosylase 1 [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 190
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 90/163 (55%), Gaps = 1/163 (0%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
PF AL +++ YQQL +AG ++ R L G + ++ L Q LR G S K
Sbjct: 19 PFQALVKAVAYQQLHARAGDAMIMRLCGLFPGVGFPDAQELVDLDEQALRSCGFSASKCR 78
Query: 220 YLHDLARKYQNGILSD-SAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
+ +A + + D SA + M + L L + G+G W+V M +I+ L + DV+P +
Sbjct: 79 AIKAIAAARSDDRVPDVSAALAMTNDELVERLIQLPGVGRWTVEMMLIYGLGQMDVMPAS 138
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
D GV +G + LY+LE P +M +L E + PYR++A+WYLWR
Sbjct: 139 DFGVCEGYRRLYALELKPGHGEMRRLGEGFAPYRTIAAWYLWR 181
>gi|332161348|ref|YP_004297925.1| putative glycosidase [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|386308855|ref|YP_006004911.1| DNA-3-methyladenine glycosylase II [Yersinia enterocolitica subsp.
palearctica Y11]
gi|418241337|ref|ZP_12867867.1| putative glycosidase [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|433548617|ref|ZP_20504667.1| DNA-3-methyladenine glycosylase II [Yersinia enterocolitica IP
10393]
gi|318605271|emb|CBY26769.1| DNA-3-methyladenine glycosylase II [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325665578|gb|ADZ42222.1| putative glycosidase [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|351779282|gb|EHB21397.1| putative glycosidase [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|431791177|emb|CCO67707.1| DNA-3-methyladenine glycosylase II [Yersinia enterocolitica IP
10393]
Length = 200
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 105/201 (52%), Gaps = 14/201 (6%)
Query: 124 SEGEVEAAIRHLRNADRQLASLID----IHPPPTFDSFHTPFLALTRSILYQQLAFKAGT 179
S GE E I HL+ D+++A+ I+ I P + D F AL R+I+ QQ++ KA
Sbjct: 4 SYGETE--INHLKRRDKKMAAAIERLGMIARPLSPDLFA----ALIRNIVDQQISVKAAL 57
Query: 180 SIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIV 239
++ R + L G V P T+ A + ++ G++ RKA Y+ A +G L SAI
Sbjct: 58 TVNARLMTLVGT---VTPITIAAAPIEAIQGCGMTMRKAGYIKGAANAALDGSLDLSAIS 114
Query: 240 NMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPS 299
+ D + L+ +NGIG W+ M +I SL RPDVL DL +R+G+ LY + LPR
Sbjct: 115 LLPDNEVIDQLSSLNGIGIWTAEMLLISSLSRPDVLSWGDLAIRRGMMNLYRHKTLPRER 174
Query: 300 QMDQLCEKWRPYRSVASWYLW 320
PY + AS YLW
Sbjct: 175 FERYRRRY-TPYGTTASLYLW 194
>gi|406994499|gb|EKE13485.1| hypothetical protein ACD_13C00015G0050 [uncultured bacterium]
Length = 198
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 88/177 (49%), Gaps = 7/177 (3%)
Query: 148 IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQ 207
I P D F L I+ QQL+ + I +R G + E +L +
Sbjct: 27 IKPKLHIDYFQ----GLVGDIIGQQLSGRVADVIESRLRTKIKGV--MTSEKILKMDENI 80
Query: 208 LRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIF 267
LR G++ K + DLA + QNG L ++ + D+ + L V GIG W+ MF++F
Sbjct: 81 LRNCGMAWSKVRAIKDLALRTQNGELKVKSLDKLSDEEVRKELVAVKGIGPWTADMFLMF 140
Query: 268 SLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
L RPDV P+ DLG++ G + + ++ + + W PYR+VASWYLWR +E
Sbjct: 141 KLGRPDVFPVEDLGIKNGFEKVTG-KKFDKEKSAKFALKNWSPYRTVASWYLWRSLE 196
>gi|359785660|ref|ZP_09288807.1| DNA repair protein [Halomonas sp. GFAJ-1]
gi|359296893|gb|EHK61134.1| DNA repair protein [Halomonas sp. GFAJ-1]
Length = 208
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 90/182 (49%), Gaps = 20/182 (10%)
Query: 152 PTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPE----TVLALTPQQ 207
P F +F + +I+ QQ++ +A +I R L +PE VL + Q
Sbjct: 42 PGFATFFS-------TIVSQQISTEAARAIMGRVNTL-------LPELHAKAVLEVEGQA 87
Query: 208 LRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIF 267
LR+ G+S RK Y LA G S + ++D +T + G G WS ++++F
Sbjct: 88 LREAGLSWRKIEYAKGLAEAELAGTFSADGLEQLNDNEAIAAITALRGFGRWSAEIYLMF 147
Query: 268 SLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAKG 327
SL RPD+ P +DL +R + L ++ P P Q QL E W P+RSV S +LW + +G
Sbjct: 148 SLQRPDIFPADDLALRVALGRLKGMDNKPTPKQARQLVEHWAPWRSVGSLFLWHYY--RG 205
Query: 328 AP 329
P
Sbjct: 206 EP 207
>gi|229077780|ref|ZP_04210407.1| DNA-3-methyladenine glycosylase II [Bacillus cereus Rock4-2]
gi|228705508|gb|EEL57867.1| DNA-3-methyladenine glycosylase II [Bacillus cereus Rock4-2]
Length = 291
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 105/186 (56%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 106 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 165
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L R +G L+ ++I N ++ + L + GIG+
Sbjct: 166 IVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIENGTEEDISAQLLPIRGIGA 225
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + +++L ++ PY S A+ Y
Sbjct: 226 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGIFQLDDKPDDAFLEKLKQECEPYCSYAALY 285
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 286 LWKSIE 291
>gi|255654622|ref|ZP_05400031.1| methylated-DNA--protein-cysteine methyltransferase [Clostridium
difficile QCD-23m63]
gi|296449396|ref|ZP_06891177.1| methylated-DNA--protein-cysteine methyltransferase [Clostridium
difficile NAP08]
gi|296880668|ref|ZP_06904622.1| methylated-DNA--protein-cysteine methyltransferase [Clostridium
difficile NAP07]
gi|296261742|gb|EFH08556.1| methylated-DNA--protein-cysteine methyltransferase [Clostridium
difficile NAP08]
gi|296428327|gb|EFH14220.1| methylated-DNA--protein-cysteine methyltransferase [Clostridium
difficile NAP07]
Length = 217
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 104/193 (53%), Gaps = 8/193 (4%)
Query: 130 AAIRHLRNADRQLASLIDI--HPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIA 187
A I +L++ D+ L+ +ID H D+ F ++ I+ QQ++ KA +I+ R
Sbjct: 8 AEIEYLKHKDKILSDIIDKIGHIEREIDT--DLFSSVIHHIIGQQISTKAQATIWKR--- 62
Query: 188 LCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLF 247
+ + ++L+ L+ G++ RKA YL D A K QNG +I M DK
Sbjct: 63 MKEHLKEINASSILSAGTTGLQSFGMTYRKAEYLTDFATKIQNGEFDLQSITYMSDKEAI 122
Query: 248 TMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEK 307
LT + GIG W+ M ++F L RP++ +DL +++G++++Y ++ R ++ ++
Sbjct: 123 DKLTSLKGIGVWTAEMILLFCLQRPNIFSFDDLAIQRGLRMVYHHRKITRK-MFEKYQKR 181
Query: 308 WRPYRSVASWYLW 320
+ PY SVAS YLW
Sbjct: 182 FSPYCSVASLYLW 194
>gi|228950977|ref|ZP_04113098.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|229068173|ref|ZP_04201480.1| DNA-3-methyladenine glycosylase II [Bacillus cereus F65185]
gi|229177010|ref|ZP_04304405.1| DNA-3-methyladenine glycosylase II [Bacillus cereus 172560W]
gi|228606485|gb|EEK63911.1| DNA-3-methyladenine glycosylase II [Bacillus cereus 172560W]
gi|228714987|gb|EEL66855.1| DNA-3-methyladenine glycosylase II [Bacillus cereus F65185]
gi|228808704|gb|EEM55202.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
kurstaki str. T03a001]
Length = 291
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 105/186 (56%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 106 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 165
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L R +G L+ ++I N ++ + L + GIG+
Sbjct: 166 IVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIENGTEEDISAQLLPIRGIGA 225
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + +++L ++ PY S A+ Y
Sbjct: 226 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGIFQLDDKPDDAFLEKLKQECEPYCSYAALY 285
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 286 LWKSIE 291
>gi|347535508|ref|YP_004842933.1| putative DNA-3-methyladenine glycosylase [Flavobacterium
branchiophilum FL-15]
gi|345528666|emb|CCB68696.1| Probable DNA-3-methyladenine glycosylase [Flavobacterium
branchiophilum FL-15]
Length = 203
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 101/199 (50%), Gaps = 6/199 (3%)
Query: 128 VEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIA 187
+E AI +L+N D +I ++ P F L IL QQ++ + F+
Sbjct: 1 METAIEYLKNKDGIFEKIIHLYGVPKIPYRPEGFETLVLLILEQQVSVDVAKA---TFLK 57
Query: 188 LCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLF 247
L G ++PE ++ L+ R GVS +KA Y+H LA N + + + +D+++
Sbjct: 58 LKNGVNHILPEVLIPLSEADFRLYGVSRQKAKYIHCLAEAVLNKQIHLDQLSSKNDETIR 117
Query: 248 TMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEK 307
L + GIG W++ ++++F L PD+LP+ D+ V ++ L L ++M E
Sbjct: 118 NELIKIKGIGHWTIDIYLMFCLKSPDILPLGDIAVSHTIK---ELTGLTTQTEMAAYTEN 174
Query: 308 WRPYRSVASWYLWRFVEAK 326
W+P+R++A++ LW + K
Sbjct: 175 WKPFRTMATYLLWHYYLKK 193
>gi|433460194|ref|ZP_20417829.1| DNA-3-methyladenine glycosylase YfjP [Halobacillus sp. BAB-2008]
gi|432191976|gb|ELK48895.1| DNA-3-methyladenine glycosylase YfjP [Halobacillus sp. BAB-2008]
Length = 289
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 95/198 (47%), Gaps = 7/198 (3%)
Query: 134 HLRNADRQLASLIDIHP-PPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGE 192
H D + L HP P FH + L + I++QQL K ++ TRF+ G
Sbjct: 93 HQHFMDTNVKQLFQDHPGTPIVKDFHL-YDCLMKVIIHQQLNMKFAYTLSTRFVHTFGST 151
Query: 193 AGVV-----PETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLF 247
V PE AL + LR + S RKA Y+ D +R G L +A+ D+ +
Sbjct: 152 KDGVWFYPDPEETAALKYEDLRALQFSQRKAEYVIDTSRMIAEGRLDLAALSGQSDEEVK 211
Query: 248 TMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEK 307
L + GIG W+ +++F L R D+ P D+G++ ++ + +++ P QM+
Sbjct: 212 KQLVKIRGIGPWTAENWLLFGLGRQDLFPKADIGIQNAWKVYFDMDKKPSYEQMETHSAG 271
Query: 308 WRPYRSVASWYLWRFVEA 325
W PYRS AS LWR +E
Sbjct: 272 WHPYRSYASLTLWRSIEG 289
>gi|229188690|ref|ZP_04315729.1| DNA-3-methyladenine glycosylase II [Bacillus cereus ATCC 10876]
gi|228594879|gb|EEK52659.1| DNA-3-methyladenine glycosylase II [Bacillus cereus ATCC 10876]
Length = 291
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 105/186 (56%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 106 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 165
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L R +G L+ ++I N ++ + L + GIG+
Sbjct: 166 IVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIENGTEEDISAQLLPIRGIGA 225
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + +++L ++ PY S A+ Y
Sbjct: 226 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGIFQLDDKPDDAFLEKLKQECEPYCSYAALY 285
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 286 LWKSIE 291
>gi|206968551|ref|ZP_03229507.1| endonuclease III domain protein [Bacillus cereus AH1134]
gi|423415692|ref|ZP_17392812.1| hypothetical protein IE1_04996 [Bacillus cereus BAG3O-2]
gi|423422655|ref|ZP_17399686.1| hypothetical protein IE5_00344 [Bacillus cereus BAG3X2-2]
gi|423428516|ref|ZP_17405520.1| hypothetical protein IE7_00332 [Bacillus cereus BAG4O-1]
gi|423507195|ref|ZP_17483778.1| hypothetical protein IG1_04752 [Bacillus cereus HD73]
gi|449087215|ref|YP_007419656.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|206737471|gb|EDZ54618.1| endonuclease III domain protein [Bacillus cereus AH1134]
gi|401095427|gb|EJQ03485.1| hypothetical protein IE1_04996 [Bacillus cereus BAG3O-2]
gi|401119159|gb|EJQ26985.1| hypothetical protein IE5_00344 [Bacillus cereus BAG3X2-2]
gi|401124736|gb|EJQ32498.1| hypothetical protein IE7_00332 [Bacillus cereus BAG4O-1]
gi|402444713|gb|EJV76592.1| hypothetical protein IG1_04752 [Bacillus cereus HD73]
gi|449020972|gb|AGE76135.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 287
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 105/186 (56%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 102 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 161
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L R +G L+ ++I N ++ + L + GIG+
Sbjct: 162 IVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIENGTEEDISAQLLPIRGIGA 221
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + +++L ++ PY S A+ Y
Sbjct: 222 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGIFQLDDKPDDAFLEKLKQECEPYCSYAALY 281
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 282 LWKSIE 287
>gi|206974371|ref|ZP_03235288.1| endonuclease III domain protein [Bacillus cereus H3081.97]
gi|217958022|ref|YP_002336566.1| endonuclease III domain-containing protein [Bacillus cereus AH187]
gi|375282558|ref|YP_005102995.1| DNA-3-methyladenine glycosidase [Bacillus cereus NC7401]
gi|423356687|ref|ZP_17334289.1| hypothetical protein IAU_04738 [Bacillus cereus IS075]
gi|423375583|ref|ZP_17352919.1| hypothetical protein IC5_04635 [Bacillus cereus AND1407]
gi|423571398|ref|ZP_17547640.1| hypothetical protein II7_04616 [Bacillus cereus MSX-A12]
gi|206747611|gb|EDZ59001.1| endonuclease III domain protein [Bacillus cereus H3081.97]
gi|217066807|gb|ACJ81057.1| endonuclease III domain protein [Bacillus cereus AH187]
gi|358351083|dbj|BAL16255.1| DNA-3-methyladenine glycosidase [Bacillus cereus NC7401]
gi|401077274|gb|EJP85614.1| hypothetical protein IAU_04738 [Bacillus cereus IS075]
gi|401091847|gb|EJP99986.1| hypothetical protein IC5_04635 [Bacillus cereus AND1407]
gi|401200768|gb|EJR07647.1| hypothetical protein II7_04616 [Bacillus cereus MSX-A12]
Length = 287
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 105/186 (56%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T++ +F+ G E V PE
Sbjct: 102 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATALTEQFVKRYGAEKNGVFFFPTPE 161
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L R +G L+ ++I ++ + L + GIG+
Sbjct: 162 IVANISIEELREQKFSQRKAEYIVGLGRSIASGTLNLASIETKAEEEVSAQLLPIRGIGT 221
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ LE+ P + ++++ ++ PY S A+ Y
Sbjct: 222 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQLEDKPDDAFLEKVKQECEPYCSYAALY 281
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 282 LWKSIE 287
>gi|395332879|gb|EJF65257.1| hypothetical protein DICSQDRAFT_159443 [Dichomitus squalens
LYAD-421 SS1]
Length = 516
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 61/87 (70%)
Query: 200 VLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSW 259
V+A LR G+SGRKA Y+ DLA K+ +G LS ++ DD+ L MLT V GIG+W
Sbjct: 253 VIAKDVATLRTAGLSGRKAEYVLDLAGKFADGTLSTRKLLEADDEELHKMLTAVRGIGTW 312
Query: 260 SVHMFMIFSLHRPDVLPINDLGVRKGV 286
+V MF +FSL RPD+LP+ DLGV++G+
Sbjct: 313 TVDMFAMFSLRRPDILPVGDLGVQRGM 339
>gi|422318640|ref|ZP_16399769.1| DNA-3-methyladenine glycosylase II, partial [Achromobacter
xylosoxidans C54]
gi|317406764|gb|EFV86901.1| DNA-3-methyladenine glycosylase II [Achromobacter xylosoxidans C54]
Length = 199
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 77/126 (61%), Gaps = 3/126 (2%)
Query: 197 PETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGIL--SDSAIVNMDDKSLFTMLTMVN 254
P +L PQ R G S K + + +A+ +G++ D A+ M D++L L +
Sbjct: 4 PRALLDTDPQVQRACGFSASKLATIRGIAQAALDGLIPARDEALA-MSDEALVERLVTLR 62
Query: 255 GIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSV 314
G+G W+V M +I++L R D+LP++D GVR+G + L L++ P P+QM + E + PYR++
Sbjct: 63 GVGRWTVEMLLIYTLERMDILPVDDFGVREGYRRLKRLDKAPSPAQMRAIGEAFSPYRTI 122
Query: 315 ASWYLW 320
A+WYLW
Sbjct: 123 AAWYLW 128
>gi|229137288|ref|ZP_04265904.1| DNA-3-methyladenine glycosylase II [Bacillus cereus BDRD-ST26]
gi|228646191|gb|EEL02409.1| DNA-3-methyladenine glycosylase II [Bacillus cereus BDRD-ST26]
Length = 291
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 105/186 (56%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T++ +F+ G E V PE
Sbjct: 106 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATALTEQFVKRYGAEKNGVFFFPTPE 165
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L R +G L+ ++I ++ + L + GIG+
Sbjct: 166 IVANISIEELREQKFSQRKAEYIVGLGRSIASGTLNLASIETKAEEEVSAQLLPIRGIGT 225
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ LE+ P + ++++ ++ PY S A+ Y
Sbjct: 226 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQLEDKPDDAFLEKVKQECEPYCSYAALY 285
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 286 LWKSIE 291
>gi|359394631|ref|ZP_09187684.1| DNA-3-methyladenine glycosylase 1 [Halomonas boliviensis LC1]
gi|357971878|gb|EHJ94323.1| DNA-3-methyladenine glycosylase 1 [Halomonas boliviensis LC1]
Length = 209
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 100/214 (46%), Gaps = 19/214 (8%)
Query: 123 SSEGEVEAAIRHLRNADRQLAS---LIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGT 179
SS +E A+ L AD +A L+ PP D F + +I+ QQL+ +A
Sbjct: 7 SSLNTIEHAMAALAKADPDIARALPLVGAPPPRERDKGFATFFS---TIVSQQLSTEAAR 63
Query: 180 SIYTRFIALCGGEAGVVPE----TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSD 235
+I R L +PE V+ + Q LR G+S RK Y LA G S
Sbjct: 64 AIMGRVNTL-------LPELHAKAVMEVEGQALRDAGLSWRKIEYAKGLAEAELAGTFSA 116
Query: 236 SAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEEL 295
+ + D +T + G G WS ++++FSL R D+ P +DL +R + L ++
Sbjct: 117 EGLEQLSDDEAIAAITELRGFGRWSAEIYLMFSLKRQDIFPADDLALRVALGRLKGMDNK 176
Query: 296 PRPSQMDQLCEKWRPYRSVASWYLWRFVEAKGAP 329
P P Q QL E W P+RSV S +LW + +G P
Sbjct: 177 PTPKQARQLVEHWAPWRSVGSLFLWHYY--RGEP 208
>gi|229148823|ref|ZP_04277071.1| DNA-3-methyladenine glycosylase II [Bacillus cereus m1550]
gi|228634617|gb|EEK91198.1| DNA-3-methyladenine glycosylase II [Bacillus cereus m1550]
Length = 291
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 105/186 (56%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 106 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEKFVKRYGTEKNGVFFFPTPE 165
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L R +G L+ ++I N ++ + L + GIG+
Sbjct: 166 IVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIENGTEEDISAQLLPIRGIGA 225
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++++ ++ PY S A+ Y
Sbjct: 226 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGIFQLDDKPDDAFLEKVKQECEPYCSYAALY 285
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 286 LWKSIE 291
>gi|398343729|ref|ZP_10528432.1| DNA-3-methyladenine glycosylase II [Leptospira inadai serovar Lyme
str. 10]
Length = 208
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 99/188 (52%), Gaps = 2/188 (1%)
Query: 135 LRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAG 194
LR D + LI P T +P+ L +S++ QQL+ KA ++ R I G
Sbjct: 14 LRRKDPVMRKLITGIGPCTLKMVGSPYHVLIKSVISQQLSVKAAATMENRVIERFGSRKR 73
Query: 195 V-VPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMV 253
P +L L+ ++LR G+S K + + +A Y +G ++D + ++D+ + L +
Sbjct: 74 FPEPNRLLGLSAEELRSAGLSFAKVATVRRIATAYDSGEITDRKLRKLEDEKVLEFLCSI 133
Query: 254 NGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRS 313
G+G W+ M ++F+L R D +NDL +RK ++ + + + ++ L ++ PYR+
Sbjct: 134 KGVGPWTAEMVLMFALDRWDHFSLNDLILRKSIERHFGIHRNSKK-EILALAGRFSPYRT 192
Query: 314 VASWYLWR 321
+ SWYLWR
Sbjct: 193 IFSWYLWR 200
>gi|103486334|ref|YP_615895.1| HhH-GPD [Sphingopyxis alaskensis RB2256]
gi|98976411|gb|ABF52562.1| HhH-GPD [Sphingopyxis alaskensis RB2256]
Length = 205
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 86/160 (53%), Gaps = 3/160 (1%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASY 220
+ L R+I+ QQ++ A TSI+ + A G AG E + A LR G+SG+K Y
Sbjct: 41 YTTLLRTIVGQQVSVAAATSIWNKLEAQFG--AGCPAEVIAAADFDTLRACGLSGQKQGY 98
Query: 221 LHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDL 280
LA+ +G L+ A+ DD+ +LT V GIG WS ++++F+ RPD+ P DL
Sbjct: 99 AKSLAQLILDGELTFDAL-PADDEEAIALLTRVKGIGRWSAEIYLLFAEGRPDIWPAGDL 157
Query: 281 GVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLW 320
V++ V + L P Q +L E WRP+R A+ + W
Sbjct: 158 AVQEAVGRILQLGARPSEKQARELAEAWRPHRGAAAIFSW 197
>gi|329890577|ref|ZP_08268920.1| hhH-GPD superfamily base excision DNA repair family protein
[Brevundimonas diminuta ATCC 11568]
gi|328845878|gb|EGF95442.1| hhH-GPD superfamily base excision DNA repair family protein
[Brevundimonas diminuta ATCC 11568]
Length = 217
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 88/173 (50%), Gaps = 4/173 (2%)
Query: 152 PTFDSFHTP--FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLR 209
P F+ P + L R I+ QQ++ A SI+ R + G+ V PE VLA + LR
Sbjct: 32 PVFEWRLRPGGYEGLFRMIVEQQVSVAAAASIWKRVVEGLDGQ--VTPEAVLARDVETLR 89
Query: 210 QIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSL 269
G+SG+KA Y H++AR + G + + +DD L + G+G W+ F++F
Sbjct: 90 TFGLSGQKAKYGHEIARAHAEGHIDFDHLERLDDAEAIAALVAIKGVGKWTAETFLMFCE 149
Query: 270 HRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRF 322
R DV P D+ +++ ++ E P Q E WRP+R+VA+ LW +
Sbjct: 150 GRGDVFPGGDVALQEAMRWADRAEARPNEKQAYARAEIWRPHRAVAAHLLWGW 202
>gi|333368196|ref|ZP_08460406.1| base-excision DNA repair protein [Psychrobacter sp. 1501(2011)]
gi|332977586|gb|EGK14354.1| base-excision DNA repair protein [Psychrobacter sp. 1501(2011)]
Length = 218
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 97/200 (48%), Gaps = 20/200 (10%)
Query: 132 IRHLRNADRQLASLIDIHP--PPTFDSFHTP--------FLALTRSILYQQLAFKAGTSI 181
I L +R + LI I P P + TP F L R+++ QQL+ A SI
Sbjct: 14 IDTLNELERHIKQLIQIEPRFAPVYKQVGTPSLRRNNGGFNELMRAMVGQQLSVAAAASI 73
Query: 182 YTRFIALCGGEAGVV-PETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVN 240
+ + +AG+ P+ + +LR G+S +K YL L + + +
Sbjct: 74 WNKL-----DKAGMTTPQDIKNADDDELRINGLSRQKIRYLRSLVEHD----IDFATLKT 124
Query: 241 MDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQ 300
+ D + LT V GIG W+ M+++FSL R DVL ++DL ++ G L L++ P P Q
Sbjct: 125 LPDDEVIATLTAVTGIGRWTAEMYLLFSLGRADVLAVDDLAIKAGAMSLLGLDDRPTPKQ 184
Query: 301 MDQLCEKWRPYRSVASWYLW 320
+ L E W PYRS AS LW
Sbjct: 185 LRLLSEPWSPYRSAASLLLW 204
>gi|163759903|ref|ZP_02166987.1| DNA-3-methyladenine glycosidase II protein [Hoeflea phototrophica
DFL-43]
gi|162282861|gb|EDQ33148.1| DNA-3-methyladenine glycosidase II protein [Hoeflea phototrophica
DFL-43]
Length = 233
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 100/203 (49%), Gaps = 3/203 (1%)
Query: 120 RPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGT 179
R + S +VEA + L AD +LA ID+ P + AL I+ Q ++ +
Sbjct: 20 RRIDSALDVEAGLAALAKADSRLAKAIDVAGPVPLRRKPPGYAALAEIIMSQMVSKASAN 79
Query: 180 SIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIV 239
+++T+ A G + PE +L L+P+ R G+S KA L ++ G L +
Sbjct: 80 ALWTKLEAAAGD---INPEAILRLSPEAHRAAGLSKAKAETLCRVSEAVLAGDLDLEELC 136
Query: 240 NMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPS 299
+D ++T + G+G W+ ++++F PDV P D+ ++ + L+ P+P
Sbjct: 137 AVDGDQAIAVMTAIKGVGPWTAEVYLLFCAGHPDVFPAGDVALQNAAAEILGLDARPQPK 196
Query: 300 QMDQLCEKWRPYRSVASWYLWRF 322
+ +L E+W P+R VA+ LW +
Sbjct: 197 ALYRLTEQWSPWRGVAARLLWAY 219
>gi|73661598|ref|YP_300379.1| DNA-3-methyladenine glycosidase [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
gi|72494113|dbj|BAE17434.1| putative DNA-3-methyladenine glycosidase [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
Length = 221
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 103/192 (53%), Gaps = 2/192 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+A ++ L D LA LI+ + P +L RSI+ QQ+ SI+ + +++
Sbjct: 10 DACVQTLIKQDATLAQLINQIGDLQIQTRADPLKSLIRSIIGQQITVAVAQSIFQK-LSI 68
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
+ V + + L +++ +G+S K +Y+ ++ +NG L+ + MDD S+
Sbjct: 69 AIDDHWTVNQ-LSQLRESEMKALGLSQSKINYIQNVLFAVRNGQLNFEQLYKMDDNSVIN 127
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GIG W+ +F++F+L R ++LPI D+G+++ Q LY + R Q+ E+W
Sbjct: 128 ALTQIKGIGRWTAEVFLLFTLQRKNILPIYDVGLQRAAQWLYQTTKAERKKQLTICKEQW 187
Query: 309 RPYRSVASWYLW 320
+ S+ ++YLW
Sbjct: 188 QGCASIGAFYLW 199
>gi|238794017|ref|ZP_04637635.1| Methylated-DNA--protein-cysteine methyltransferase [Yersinia
intermedia ATCC 29909]
gi|238726649|gb|EEQ18185.1| Methylated-DNA--protein-cysteine methyltransferase [Yersinia
intermedia ATCC 29909]
Length = 201
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 105/199 (52%), Gaps = 14/199 (7%)
Query: 126 GEVEAAIRHLRNADRQLASLID----IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSI 181
GE E I HL+ D+++A+ I+ I P + D F AL R+I+ QQ++ KA ++
Sbjct: 6 GETE--INHLKRRDKKMAAAIERLGMITRPLSPDLFA----ALIRNIVDQQISVKAALTV 59
Query: 182 YTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNM 241
R + L G V P TV A + + ++ G++ +KA Y+ A NG L SAI +
Sbjct: 60 NARLLTLLGA---VTPITVAAASVEAIQGCGMTMKKAGYIKGAADAALNGSLDLSAISLL 116
Query: 242 DDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQM 301
D + L+ ++G+G W+ M +I SL RPDV+ DL +R+G+ LY + LPR
Sbjct: 117 PDNDVIAQLSNLSGVGIWTAEMLLISSLARPDVVSWGDLAIRRGMMNLYGHKTLPRERFE 176
Query: 302 DQLCEKWRPYRSVASWYLW 320
PY + AS YLW
Sbjct: 177 RYRRRY-TPYGTTASLYLW 194
>gi|225683647|gb|EEH21931.1| DNA-3-methyladenine glycosylase [Paracoccidioides brasiliensis
Pb03]
Length = 407
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 91/208 (43%), Gaps = 41/208 (19%)
Query: 120 RPLSSEGEV-EAAIRHLRNADRQLASLIDIHPPPTFDSFH-----TPFLALTRSILYQQL 173
RP ++ G V E A+ HL QL +ID HP P F PF AL I+ QQ+
Sbjct: 162 RPTTTTGTVLEEAVAHLITVAPQLKPVIDKHPCPLFSPAGLAEEIDPFNALVSGIIGQQV 221
Query: 174 AFKAGTSIYTRFIAL-----CGG------------EAGV------------------VPE 198
+ A SI RF+ L C G E GV P
Sbjct: 222 SGAAAKSIKRRFLGLFGCLDCNGNAEASNNGVDATEKGVGEEKERAEMRYDRDDHFPTPA 281
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V A LR G+S RKA Y+ LA K+ +G LS ++ D+ + L V G+G
Sbjct: 282 QVAACGVATLRTAGLSQRKAEYIQGLAEKFASGELSAHMLLQASDEEVLEKLIAVRGLGR 341
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGV 286
WSV MF F L R DV DLGV++G+
Sbjct: 342 WSVEMFECFGLKRMDVFSTGDLGVQRGM 369
>gi|88706229|ref|ZP_01103936.1| DNA-3-methyladenine glycosidase II [Congregibacter litoralis KT71]
gi|88699623|gb|EAQ96735.1| DNA-3-methyladenine glycosidase II [Congregibacter litoralis KT71]
Length = 204
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 95/191 (49%), Gaps = 3/191 (1%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A+ L DR LA ++ H PP S F L I QQ++ + S Y + AL
Sbjct: 12 AVETLIAGDRDLARVVARHGPPKLLSRPPGFPTLVYIIFEQQVSLASAKSTYDKVAALL- 70
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
E L L+ + LR GVS +KA Y +A G L A+ D+ + T+L
Sbjct: 71 --PEFTAEAYLQLSDEALRAAGVSRQKARYTRLVAEATIAGDLPIHALGRKPDEEVRTLL 128
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRP 310
T + GIG+W+ ++++ +L RPD+ P+ DL + K + S P ++ L E++RP
Sbjct: 129 TAITGIGNWTADVYLMLALRRPDLWPVGDLALVKAATAIKSRPHKPDKLWLENLGERYRP 188
Query: 311 YRSVASWYLWR 321
YRSVA+ WR
Sbjct: 189 YRSVATGIFWR 199
>gi|30018676|ref|NP_830307.1| DNA-3-methyladenine glycosylase II [Bacillus cereus ATCC 14579]
gi|423590244|ref|ZP_17566308.1| hypothetical protein IIE_05633 [Bacillus cereus VD045]
gi|423644769|ref|ZP_17620385.1| hypothetical protein IK9_04712 [Bacillus cereus VD166]
gi|29894217|gb|AAP07508.1| DNA-3-methyladenine glycosylase II [Bacillus cereus ATCC 14579]
gi|401221066|gb|EJR27692.1| hypothetical protein IIE_05633 [Bacillus cereus VD045]
gi|401269385|gb|EJR75418.1| hypothetical protein IK9_04712 [Bacillus cereus VD166]
Length = 287
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 105/186 (56%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 102 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 161
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L R +G L+ ++I N ++ + L + GIG+
Sbjct: 162 IVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIENGTEEDISAQLLPIRGIGA 221
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++++ ++ PY S A+ Y
Sbjct: 222 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGIFQLDDKPDDAFLEKVKQECEPYCSYAALY 281
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 282 LWKSIE 287
>gi|229125918|ref|ZP_04254943.1| DNA-3-methyladenine glycosylase II [Bacillus cereus BDRD-Cer4]
gi|228657576|gb|EEL13389.1| DNA-3-methyladenine glycosylase II [Bacillus cereus BDRD-Cer4]
Length = 291
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 105/186 (56%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 106 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 165
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L R +G L+ ++I N ++ + L + GIG+
Sbjct: 166 IVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIENGTEEDISAQLLPIRGIGA 225
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++++ ++ PY S A+ Y
Sbjct: 226 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGIFQLDDKPDDAFLEKVKQECEPYCSYAALY 285
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 286 LWKSIE 291
>gi|296501250|ref|YP_003662950.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis BMB171]
gi|296322302|gb|ADH05230.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis BMB171]
Length = 287
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 105/186 (56%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 102 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 161
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L R +G L+ ++I N ++ + L + GIG+
Sbjct: 162 IVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIENGTEEDISAQLLPIRGIGA 221
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++++ ++ PY S A+ Y
Sbjct: 222 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGIFQLDDKPDDAFLEKVKQECEPYCSYAALY 281
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 282 LWKSIE 287
>gi|228919349|ref|ZP_04082718.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228840285|gb|EEM85557.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 291
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 105/186 (56%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 106 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 165
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L R +G L+ ++I N ++ + L + GIG+
Sbjct: 166 IVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIENGTEEEVSAQLLPIRGIGA 225
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++++ ++ PY S A+ Y
Sbjct: 226 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGIFQLDDKPDDAFLEKVKQECEPYCSYAALY 285
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 286 LWKSIE 291
>gi|229108091|ref|ZP_04237716.1| DNA-3-methyladenine glycosylase II [Bacillus cereus Rock1-15]
gi|228675366|gb|EEL30585.1| DNA-3-methyladenine glycosylase II [Bacillus cereus Rock1-15]
Length = 291
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 105/186 (56%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 106 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 165
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L R +G L+ ++I N ++ + L + GIG+
Sbjct: 166 IVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIENGTEEDISAQLLPIRGIGA 225
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++++ ++ PY S A+ Y
Sbjct: 226 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGIFQLDDKPDDAFLEKVKQECEPYCSYAALY 285
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 286 LWKSIE 291
>gi|229154190|ref|ZP_04282313.1| DNA-3-methyladenine glycosylase II [Bacillus cereus ATCC 4342]
gi|228629280|gb|EEK85984.1| DNA-3-methyladenine glycosylase II [Bacillus cereus ATCC 4342]
Length = 291
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 105/186 (56%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 106 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 165
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L R +GIL+ ++I ++ + L + GIG+
Sbjct: 166 IVANISIEELREQKFSQRKAEYIVGLGRSIASGILNLASIETKAEEEVSAQLLPIRGIGT 225
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++++ ++ PY S A+ Y
Sbjct: 226 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQLDDKPDDAFLEKVKQECEPYCSYAALY 285
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 286 LWKSIE 291
>gi|218232083|ref|YP_002365268.1| endonuclease III domain protein [Bacillus cereus B4264]
gi|218160040|gb|ACK60032.1| endonuclease III domain protein [Bacillus cereus B4264]
Length = 287
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 105/186 (56%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 102 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 161
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L R +G L+ ++I N ++ + L + GIG+
Sbjct: 162 IVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIENGTEEDISAQLLPIRGIGA 221
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++++ ++ PY S A+ Y
Sbjct: 222 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGIFQLDDKPDDAFLEKVKQECEPYCSYAALY 281
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 282 LWKSIE 287
>gi|229143211|ref|ZP_04271643.1| DNA-3-methyladenine glycosylase II [Bacillus cereus BDRD-ST24]
gi|228640292|gb|EEK96690.1| DNA-3-methyladenine glycosylase II [Bacillus cereus BDRD-ST24]
Length = 291
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 105/186 (56%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 106 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 165
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L R +G L+ ++I N ++ + L + GIG+
Sbjct: 166 IVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIENGTEEDISAQLLPIRGIGA 225
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++++ ++ PY S A+ Y
Sbjct: 226 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGIFQLDDKPDDAFLEKVKQECEPYCSYAALY 285
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 286 LWKSIE 291
>gi|423653366|ref|ZP_17628665.1| hypothetical protein IKG_00354 [Bacillus cereus VD200]
gi|401301530|gb|EJS07118.1| hypothetical protein IKG_00354 [Bacillus cereus VD200]
Length = 287
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 105/186 (56%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 102 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 161
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L R +G L+ ++I N ++ + L + GIG+
Sbjct: 162 IVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIENGTEEDISAQLLPIRGIGA 221
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++++ ++ PY S A+ Y
Sbjct: 222 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGIFQLDDKPDDAFLEKVKQECEPYCSYAALY 281
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 282 LWKSIE 287
>gi|423632396|ref|ZP_17608142.1| hypothetical protein IK5_05245 [Bacillus cereus VD154]
gi|401261274|gb|EJR67436.1| hypothetical protein IK5_05245 [Bacillus cereus VD154]
Length = 287
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 105/186 (56%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 102 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 161
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L R +G L+ ++I N ++ + L + GIG+
Sbjct: 162 IVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIENGTEEDISAQLLPIRGIGA 221
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++++ ++ PY S A+ Y
Sbjct: 222 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGIFRLDDKPDDAFLEKVKQECEPYCSYAALY 281
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 282 LWKSIE 287
>gi|423638470|ref|ZP_17614122.1| hypothetical protein IK7_04878 [Bacillus cereus VD156]
gi|401270786|gb|EJR76805.1| hypothetical protein IK7_04878 [Bacillus cereus VD156]
Length = 287
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 105/186 (56%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 102 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 161
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L R +G L+ ++I N ++ + L + GIG+
Sbjct: 162 IVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIENGTEEEVSAQLLPIRGIGA 221
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++++ ++ PY S A+ Y
Sbjct: 222 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGIFQLDDKPDDAFLEKVKQECEPYCSYAALY 281
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 282 LWKSIE 287
>gi|170092255|ref|XP_001877349.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647208|gb|EDR11452.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 415
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 98/196 (50%), Gaps = 32/196 (16%)
Query: 127 EVEAAIRHLRNADRQLASL-----------IDIHPPPTFDSFHTPFLALTRSILYQQLAF 175
+ E A HL + DR+ L ++ P +D+ + P QQ+++
Sbjct: 81 DFELAKNHLVSVDRRFQDLFLKMQCKPFEHLEQLDPFRYDNLNFP------KCRGQQISW 134
Query: 176 KAGTSIYTRFIALCGGEAGVVPE-----TVLAL--TPQQ--------LRQIGVSGRKASY 220
A SI RFI L P+ + L L TPQ LR G+S RKA Y
Sbjct: 135 LAARSITHRFIRLYHPSIPEKPDHQMMKSYLHLFPTPQDIVDTDIATLRTAGLSARKAEY 194
Query: 221 LHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDL 280
+ DLA ++ +G LS ++N DD L+++L V GIG W+V MF IFSL RPD+LP+ DL
Sbjct: 195 VKDLASRFVDGRLSTEKLLNADDDDLYSILIEVRGIGRWTVDMFAIFSLRRPDILPVGDL 254
Query: 281 GVRKGVQLLYSLEELP 296
GV++G+ + LP
Sbjct: 255 GVQRGLVRWFLSLHLP 270
>gi|228956902|ref|ZP_04118683.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228802745|gb|EEM49581.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
pakistani str. T13001]
Length = 291
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 105/186 (56%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 106 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 165
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L R +G L+ ++I N ++ + L + GIG+
Sbjct: 166 IVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIENGTEEDISAQLLPIRGIGA 225
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++++ ++ PY S A+ Y
Sbjct: 226 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGIFRLDDKPDDAFLEKVKQECEPYCSYAALY 285
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 286 LWKSIE 291
>gi|448688094|ref|ZP_21693989.1| DNA-3-methyladenine glycosylase [Haloarcula japonica DSM 6131]
gi|445779623|gb|EMA30542.1| DNA-3-methyladenine glycosylase [Haloarcula japonica DSM 6131]
Length = 203
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 93/185 (50%), Gaps = 8/185 (4%)
Query: 138 ADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTR-FIALCGGEAGVV 196
AD + L++ H T D F L SIL QQ++ + + R F A+ V
Sbjct: 11 ADPDIGPLVETHGELTLDPASDLFERLVVSILRQQVSMASAAATRERLFDAVT-----VT 65
Query: 197 PETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGI 256
P + + LR G+S +K Y++++A + S + D+ + LT + G+
Sbjct: 66 PAGIRDADDEVLRDAGLSRQKTRYVNEVADTFLEHGYSMETFEDTTDEEIHEELTTITGV 125
Query: 257 GSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVAS 316
G W+ +M ++F+ R DV P+ DLG+RKG + + E ++M + E+W PYRS AS
Sbjct: 126 GDWTANMQLLFAFGREDVFPVGDLGIRKGFEAVVG--EGYSRAEMREYAERWSPYRSYAS 183
Query: 317 WYLWR 321
YLWR
Sbjct: 184 LYLWR 188
>gi|47567251|ref|ZP_00237965.1| DNA-3-methyladenine glycosylase II [Bacillus cereus G9241]
gi|47556094|gb|EAL14431.1| DNA-3-methyladenine glycosylase II [Bacillus cereus G9241]
Length = 287
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 105/186 (56%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 102 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 161
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L R +GIL+ ++I ++ + L + GIG+
Sbjct: 162 RVANISIEELREQKFSQRKAEYIVGLGRSIASGILNLASIETKAEEEVSAQLLPIRGIGT 221
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++++ ++ PY S A+ Y
Sbjct: 222 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQLDDKPDDAFLEKVKQECEPYCSYAALY 281
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 282 LWKSIE 287
>gi|365163523|ref|ZP_09359631.1| hypothetical protein HMPREF1014_05094 [Bacillus sp. 7_6_55CFAA_CT2]
gi|363615389|gb|EHL66853.1| hypothetical protein HMPREF1014_05094 [Bacillus sp. 7_6_55CFAA_CT2]
Length = 287
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 97/169 (57%), Gaps = 5/169 (2%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSG 215
F L R I++QQ+ K T + +F+ G E V PE V ++ ++LR+ S
Sbjct: 119 FACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPEIVANISIEELREQKFSQ 178
Query: 216 RKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVL 275
RKA Y+ L R +G L+ ++I N ++ + L + GIG+W+V F++F L R ++
Sbjct: 179 RKAEYIVGLGRSIVSGTLNLASIENGTEEEVSAQLLPIRGIGAWTVQNFLMFGLGRKNMF 238
Query: 276 PINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
P D+G+++ VQ ++ L++ P + +++L ++ PY S A+ YLW+ +E
Sbjct: 239 PKADIGIQRAVQGIFQLDDKPDDAFLEKLKQECEPYCSYAALYLWKSIE 287
>gi|431794172|ref|YP_007221077.1| HhH-GPD superfamily base excision DNA repair protein
[Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430784398|gb|AGA69681.1| HhH-GPD superfamily base excision DNA repair protein
[Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 197
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 97/191 (50%), Gaps = 8/191 (4%)
Query: 132 IRHLRNADRQLASLIDIHPPPTFDSFHTP--FLALTRSILYQQLAFKAGTSIYTRFIALC 189
I HL+ D L ID + TP F AL S++ QQ++ KA +++ R L
Sbjct: 10 IEHLKAQDPVLGQAID--QIGMIEREVTPQLFEALISSVVSQQISKKAAETVWNRLQTLL 67
Query: 190 GGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTM 249
G V E + + ++ G+S RKA Y+ +A Q G + + + D + +
Sbjct: 68 GE---VNAEQIDQTELEAIQGCGMSMRKAGYIKGIAEAAQRGEVDFEKLPTLSDDEIIKL 124
Query: 250 LTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWR 309
L + G+G W+ M +IFSL RPDV+ DL +R+G+ Y L EL + + D +K+
Sbjct: 125 LPALPGVGVWTAEMLLIFSLCRPDVVSFKDLAIRRGMMNCYGLNELTKET-FDHYRQKYS 183
Query: 310 PYRSVASWYLW 320
PY SVAS YLW
Sbjct: 184 PYGSVASLYLW 194
>gi|328951382|ref|YP_004368717.1| HhH-GPD family protein [Marinithermus hydrothermalis DSM 14884]
gi|328451706|gb|AEB12607.1| HhH-GPD family protein [Marinithermus hydrothermalis DSM 14884]
Length = 201
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 109/210 (51%), Gaps = 19/210 (9%)
Query: 117 IIARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFK 176
+ ARP EV AA+ D +A+L+ H P + H P+ L R+I+ QQL+
Sbjct: 10 VTARP-----EVLAAL----QTDPVMAALVARHGPYRW-GLHPPYATLVRAIVGQQLSNA 59
Query: 177 AGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDS 236
A +IY R A G+ P +LA + LR +G+S K YL LAR G L
Sbjct: 60 AARTIYARLKA----RVGLDPAALLAASEASLRAVGLSRVKIGYLRGLARFALEGGLE-- 113
Query: 237 AIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELP 296
+ + D + L + G+G W+V M +IF L R +V P+ DLG+ + + LY + +
Sbjct: 114 GLEALPDAEVARQLGALKGVGPWTVEMLLIFGLGRMNVWPVADLGLARQARALYGVAD-- 171
Query: 297 RPSQMDQLCEKWRPYRSVASWYLWRFVEAK 326
+ + +L E+++PYRS A+WYLW + K
Sbjct: 172 -RAGLVRLGERFQPYRSAAAWYLWAEADGK 200
>gi|436836327|ref|YP_007321543.1| HhH-GPD family protein [Fibrella aestuarina BUZ 2]
gi|384067740|emb|CCH00950.1| HhH-GPD family protein [Fibrella aestuarina BUZ 2]
Length = 218
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 91/172 (52%), Gaps = 10/172 (5%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCG----GEAGVVPETVLALTPQQLRQIGVSGR 216
++AL SI+ QQ++ KA +I+ RF L E P ++A + +LR G+S +
Sbjct: 41 YVALLNSIVSQQISTKAAEAIFRRFRLLFSETAEAEGYPTPAQLVAKSIDELRSAGLSFQ 100
Query: 217 KASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLP 276
K YL + R L+ S + + D+++ LT + G+G W+V M ++F L RPDV P
Sbjct: 101 KIDYLQSVGRFALANDLTTSYVEQLTDEAIVQYLTPIKGVGRWTVEMLLMFVLDRPDVFP 160
Query: 277 INDLGVRKGVQLLY------SLEELPRPSQMDQLCEKWRPYRSVASWYLWRF 322
I+DL +R+ + Y Q+ + E WRPYR++A YLWR+
Sbjct: 161 IDDLVIRQKMIRAYEPTADSGKTGRALYKQLHAIAEPWRPYRTLACRYLWRW 212
>gi|399067200|ref|ZP_10748817.1| HhH-GPD superfamily base excision DNA repair protein
[Novosphingobium sp. AP12]
gi|398027212|gb|EJL20771.1| HhH-GPD superfamily base excision DNA repair protein
[Novosphingobium sp. AP12]
Length = 205
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 88/175 (50%), Gaps = 5/175 (2%)
Query: 146 IDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTP 205
I +P P + T L R+I+ QQ++ A S++ R AL G ++PET+LA
Sbjct: 28 ITGYPEPRIRA--TGHATLLRTIVGQQVSVAAAASVWNRLEALLG--ENLLPETLLAAEF 83
Query: 206 QQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFM 265
LR G+S +K Y L G L D + DD+ L + GIG WS +++
Sbjct: 84 DALRACGLSRQKQGYARSLCELVLAGNL-DLDNLPADDEEAIAQLVQIKGIGRWSAEIYL 142
Query: 266 IFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLW 320
+F+ RPD+ P DL V+ G+ L LE P + +L E WRP+R A+ + W
Sbjct: 143 LFAEGRPDIWPAGDLAVQAGLHKLLGLEARPSEKRTRELAEAWRPHRGAAAIFTW 197
>gi|83950338|ref|ZP_00959071.1| DNA-3-methyladenine glycosylase II, putative [Roseovarius
nubinhibens ISM]
gi|83838237|gb|EAP77533.1| DNA-3-methyladenine glycosylase II, putative [Roseovarius
nubinhibens ISM]
Length = 209
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 91/163 (55%), Gaps = 10/163 (6%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-PETVLALTPQQLRQIGVSGRKAS 219
F L +I+ QQ++ + +I+ R A AG+ PE V A T + LR++G+S +K
Sbjct: 45 FAELLSAIVSQQVSVASANAIWGRVAA-----AGLTTPEAVSAATEESLRELGLSRQKVR 99
Query: 220 YLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIND 279
Y LA GI D + M +++ LT V GIG W+ ++ +FSL R DV ND
Sbjct: 100 YAKALA---AAGIDFDG-LREMPSEAVIARLTEVAGIGRWTAEIYAMFSLGRADVFAHND 155
Query: 280 LGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRF 322
L +++ ++LY LE P+ QM ++ + W P+RSVA+ LW +
Sbjct: 156 LALQEAARVLYELETRPKERQMREMAQAWSPWRSVAARLLWAY 198
>gi|329665897|pdb|2YG8|A Chain A, Structure Of An Unusual 3-Methyladenine Dna Glycosylase Ii
( Alka) From Deinococcus Radiodurans
gi|329665898|pdb|2YG8|B Chain B, Structure Of An Unusual 3-Methyladenine Dna Glycosylase Ii
( Alka) From Deinococcus Radiodurans
Length = 225
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 90/173 (52%), Gaps = 12/173 (6%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
PF L RS+ QQL+ KA +IY R L GG VVP +L ++ LR +G+S K
Sbjct: 61 PFGRLVRSVAGQQLSVKAAQAIYGRLEGLPGG---VVPAALLKVSGDDLRGVGLSWAKVR 117
Query: 220 YLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIND 279
+ A +G + + + D+ + L + GIG W+ F++F+L RPDV D
Sbjct: 118 TVQAAAAAAVSGQIDFAHLSGQPDELVIAELVQLPGIGRWTAEXFLLFALARPDVFSSGD 177
Query: 280 LGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLW---RFVEAKGAP 329
L +R+GV+ LY E+ + +W PYRS+AS YLW +A GAP
Sbjct: 178 LALRQGVERLYPGED------WRDVTARWAPYRSLASRYLWANSARXQAGGAP 224
>gi|423387094|ref|ZP_17364348.1| hypothetical protein ICE_04838 [Bacillus cereus BAG1X1-2]
gi|423531513|ref|ZP_17507958.1| hypothetical protein IGE_05065 [Bacillus cereus HuB1-1]
gi|401629988|gb|EJS47797.1| hypothetical protein ICE_04838 [Bacillus cereus BAG1X1-2]
gi|402443963|gb|EJV75855.1| hypothetical protein IGE_05065 [Bacillus cereus HuB1-1]
Length = 287
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 105/186 (56%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 102 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGIEKNGVFFFPTPE 161
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L R +G L+ ++I N ++ + L + GIG+
Sbjct: 162 IVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIENGTEEEVSAQLLPIRGIGA 221
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++++ ++ PY S A+ Y
Sbjct: 222 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGIFQLDDKPDDAFLEKVKQECEPYCSYAALY 281
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 282 LWKSIE 287
>gi|228937722|ref|ZP_04100356.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228970602|ref|ZP_04131250.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228977181|ref|ZP_04137580.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis Bt407]
gi|228782490|gb|EEM30669.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis Bt407]
gi|228789068|gb|EEM36999.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228821930|gb|EEM67924.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
berliner ATCC 10792]
Length = 291
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 104/186 (55%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 106 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 165
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L R +G L+ ++I N ++ + L + GIG+
Sbjct: 166 IVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIENETEEEVSAQLLPIRGIGA 225
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P ++++ ++ PY S A+ Y
Sbjct: 226 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGIFQLDDKPDDVFLEKVKQECEPYCSYAALY 285
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 286 LWKSIE 291
>gi|254455971|ref|ZP_05069400.1| DNA-3-methyladenine glycosylase I [Candidatus Pelagibacter sp.
HTCC7211]
gi|207082973|gb|EDZ60399.1| DNA-3-methyladenine glycosylase I [Candidatus Pelagibacter sp.
HTCC7211]
Length = 211
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 102/198 (51%), Gaps = 5/198 (2%)
Query: 130 AAIRHLRNADRQLASLIDIHPPP---TFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFI 186
+A ++L D+ + LI + P T S F +L +SI+ QQ++ A S++
Sbjct: 10 SAKKYLSRNDKVMKYLIQKYSEPSEVTLTSRKDIFYSLCKSIIGQQISVAAANSVF--LK 67
Query: 187 ALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSL 246
+ + +TV LT QL+ G+S +KA + LA++ N I M D+
Sbjct: 68 FKKKCKNKINAKTVYKLTVTQLKSCGLSRQKAKGIKSLAKQTLNKTFDSKLIPKMSDEEA 127
Query: 247 FTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCE 306
L+ + IG WS M ++F+ +R ++ PI D+G+ + + Y E LP ++ L +
Sbjct: 128 IIYLSKLRQIGRWSAEMILLFTYNRSNIWPIQDIGLLRAISKNYKKEYLPPEKYVNLLYK 187
Query: 307 KWRPYRSVASWYLWRFVE 324
++ PY SVA+WYLWR ++
Sbjct: 188 RFSPYCSVATWYLWRSID 205
>gi|434399718|ref|YP_007133722.1| HhH-GPD family protein [Stanieria cyanosphaera PCC 7437]
gi|428270815|gb|AFZ36756.1| HhH-GPD family protein [Stanieria cyanosphaera PCC 7437]
Length = 224
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 103/194 (53%), Gaps = 5/194 (2%)
Query: 130 AAIRHLRNADRQLASLID-IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+A+++L +D LA +++ + PP + F L + IL QQ++ A ++Y R L
Sbjct: 16 SALKYLAQSDLDLAQILETLGNPPRWQR-EPGFPTLLQIILEQQVSLAAAKAVYQR---L 71
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
C + PE L+L QL+ IG S +K SY L+ N ++ + + ++ + T
Sbjct: 72 CNLVQPLTPENFLSLDEIQLKTIGFSRQKISYGRALSEAIINQQINLDWLADQEETIIRT 131
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
L + GIG W++ +++ +L DV P DL V VQ + +L P P Q++ + E W
Sbjct: 132 QLKQIKGIGDWTIDNYLLMALQHWDVFPKGDLAVAIAVQKIKNLPTRPTPIQLELIAEAW 191
Query: 309 RPYRSVASWYLWRF 322
RP+R++A+ LW +
Sbjct: 192 RPWRAIATQILWHY 205
>gi|229171270|ref|ZP_04298860.1| DNA-3-methyladenine glycosylase II [Bacillus cereus MM3]
gi|228612227|gb|EEK69459.1| DNA-3-methyladenine glycosylase II [Bacillus cereus MM3]
Length = 291
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 104/186 (55%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 106 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 165
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L R +G L+ ++I D+ + L + GIG+
Sbjct: 166 IVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIETRTDEEVSAQLLPIRGIGT 225
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++++ ++ PY S A+ Y
Sbjct: 226 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQLDDKPDDAFLEKVKQECEPYCSYAALY 285
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 286 LWKSIE 291
>gi|418575079|ref|ZP_13139236.1| putative DNA-3-methyladenine glycosidase [Staphylococcus
saprophyticus subsp. saprophyticus KACC 16562]
gi|379326534|gb|EHY93655.1| putative DNA-3-methyladenine glycosidase [Staphylococcus
saprophyticus subsp. saprophyticus KACC 16562]
Length = 221
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 103/192 (53%), Gaps = 2/192 (1%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+A ++ L D LA LI+ + P +L RSI+ QQ+ SI+ + +++
Sbjct: 10 DACVQTLIKQDATLAHLINQIGDLQIQTRPDPLKSLIRSIIGQQITVAVAQSIFQK-LSI 68
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
+ V + + L +++ +G+S K +Y+ ++ +NG L+ + MDD S+
Sbjct: 69 AIDDHWTVNQ-LSQLRESEMKALGLSQSKINYIQNVLFAVRNGQLNFEQLYKMDDNSVIN 127
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + GIG W+ +F++F+L R ++LPI D+G+++ Q LY + R Q+ E+W
Sbjct: 128 ALTQIKGIGRWTAEVFLLFTLQRKNILPIYDVGLQRAAQWLYQTTKAERKKQLTICKEQW 187
Query: 309 RPYRSVASWYLW 320
+ S+ ++YLW
Sbjct: 188 QGCASIGAFYLW 199
>gi|448666519|ref|ZP_21685164.1| DNA-3-methyladenine glycosylase [Haloarcula amylolytica JCM 13557]
gi|445771650|gb|EMA22706.1| DNA-3-methyladenine glycosylase [Haloarcula amylolytica JCM 13557]
Length = 203
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 94/185 (50%), Gaps = 8/185 (4%)
Query: 138 ADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTR-FIALCGGEAGVV 196
AD + L++ H T D F L SIL QQ++ + + R F A+ V
Sbjct: 11 ADPDIGPLVETHGELTLDPSSDLFERLVVSILRQQVSMASAAATRERLFDAVT-----VT 65
Query: 197 PETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGI 256
PE + LR G+S +K Y++++A + S + D+ + LT + G+
Sbjct: 66 PEGIRDADNDLLRDAGLSRQKTRYVNEVADAFLEHGYSLETFEDAADEEIHEELTAITGV 125
Query: 257 GSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVAS 316
G W+ +M ++F+ R DV P+ DLG+RKG + + + + ++M + E+W PYRS AS
Sbjct: 126 GDWTANMQLLFAFGREDVFPVGDLGIRKGFEAV--VGDGYSRAEMREYAERWSPYRSYAS 183
Query: 317 WYLWR 321
YLWR
Sbjct: 184 LYLWR 188
>gi|384184499|ref|YP_005570395.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
chinensis CT-43]
gi|410672788|ref|YP_006925159.1| putative DNA-3-methyladenine glycosylase YfjP [Bacillus
thuringiensis Bt407]
gi|452196794|ref|YP_007476875.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|326938208|gb|AEA14104.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
chinensis CT-43]
gi|409171917|gb|AFV16222.1| putative DNA-3-methyladenine glycosylase YfjP [Bacillus
thuringiensis Bt407]
gi|452102187|gb|AGF99126.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 287
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 104/186 (55%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 102 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 161
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L R +G L+ ++I N ++ + L + GIG+
Sbjct: 162 IVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIENETEEEVSAQLLPIRGIGA 221
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P ++++ ++ PY S A+ Y
Sbjct: 222 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGIFQLDDKPDDVFLEKVKQECEPYCSYAALY 281
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 282 LWKSIE 287
>gi|423404871|ref|ZP_17382044.1| hypothetical protein ICW_05269 [Bacillus cereus BAG2X1-2]
gi|423461508|ref|ZP_17438305.1| hypothetical protein IEI_04648 [Bacillus cereus BAG5X2-1]
gi|423479708|ref|ZP_17456422.1| hypothetical protein IEO_05165 [Bacillus cereus BAG6X1-1]
gi|401136646|gb|EJQ44233.1| hypothetical protein IEI_04648 [Bacillus cereus BAG5X2-1]
gi|401646177|gb|EJS63809.1| hypothetical protein ICW_05269 [Bacillus cereus BAG2X1-2]
gi|402424934|gb|EJV57096.1| hypothetical protein IEO_05165 [Bacillus cereus BAG6X1-1]
Length = 287
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 104/186 (55%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 102 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 161
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L R +G L+ ++I D+ + L + GIG+
Sbjct: 162 IVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIETRADEEVSAQLLPIRGIGT 221
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++++ ++ PY S A+ Y
Sbjct: 222 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQLDDKPDDAFLEKVKQECEPYCSYAALY 281
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 282 LWKSIE 287
>gi|149181244|ref|ZP_01859742.1| YfjP [Bacillus sp. SG-1]
gi|148850969|gb|EDL65121.1| YfjP [Bacillus sp. SG-1]
Length = 290
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 116/240 (48%), Gaps = 9/240 (3%)
Query: 94 ATSAKSTKSRAIQQQQQTLTVPRI--IARPLSSEGEVEAAIRHLRNADRQLASLIDIHPP 151
AT S I+ + + R+ + R EG + +H + D + I+
Sbjct: 52 ATGTSDNPSFLIKMESEDADDSRLAYLKRIFQWEGTLRDIHQHFLDTDLR-DIFIEHSGT 110
Query: 152 PTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PETVLALTPQ 206
P F +P+ L +SI++QQL ++ RF+ G + V P V L
Sbjct: 111 PIVLEF-SPYATLMKSIIHQQLNLAFAHTLTQRFVQKYGRQKDGVWFYPQPSDVAELDIS 169
Query: 207 QLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMI 266
+LR++ S RKA Y+ ++++ G L+ + D+ + L + GIG W+ +++
Sbjct: 170 ELREMQFSQRKAEYVIGVSKEIAEGRLNLQELEEKSDEEILKELVKLRGIGPWTAENYLM 229
Query: 267 FSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAK 326
F+L R ++ P D+G++ ++ LY ++ P +++D++ W PY S AS YLWR +E +
Sbjct: 230 FALGRLNLFPKTDIGIQNALKKLYGMDRKPSLAEIDKMSAAWNPYLSYASLYLWRSIENR 289
>gi|154247764|ref|YP_001418722.1| HhH-GPD family protein [Xanthobacter autotrophicus Py2]
gi|154161849|gb|ABS69065.1| HhH-GPD family protein [Xanthobacter autotrophicus Py2]
Length = 217
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 101/213 (47%), Gaps = 6/213 (2%)
Query: 122 LSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSI 181
LS + + A+ L D +L L+D+ PT F L ++ QQL+ + +I
Sbjct: 7 LSDQRAFDRALDDLLALDPRLVPLVDLAGRPTLRRRPPGFAGLAAVVVAQQLSVASARAI 66
Query: 182 YTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNM 241
+ R + GG V E +LA TP+ LR G+S K L +AR G + A+ M
Sbjct: 67 HGRLESTLGGAPSV--EAMLAATPEALRAAGLSAPKIRTLTGIARALAEGAVDLDAVARM 124
Query: 242 DDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQM 301
+ + LT + G+G W+ ++++F L R D P DL ++ + + L P +
Sbjct: 125 EADAAAETLTRLPGVGLWTADIYLLFCLGRADAFPHGDLALQVALGEAFDLPGRATPQGL 184
Query: 302 DQLCEKWRPYRSVASWYLWRFVEAK----GAPS 330
+ E WRP R VA+ LW + A+ GAP+
Sbjct: 185 RAVAEDWRPLRGVAAHLLWAYYGARRTRQGAPA 217
>gi|346322738|gb|EGX92336.1| DNA-3-methyladenine glycosylase, putative [Cordyceps militaris
CM01]
Length = 357
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 117/272 (43%), Gaps = 34/272 (12%)
Query: 87 QPTESSKATSAKSTKSRAIQQQQQTLTVPRIIARPLSSEGEVEA-------------AIR 133
QP ++ + T + + + L PR A P S+G + A
Sbjct: 78 QPATVARLADPRGTNAMLLSPETSRLIAPRDEAPPSPSKGRGKPPPTTTTTQTLLQEACD 137
Query: 134 HLRNADRQLASLIDIH-----PPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
HL + D ++ LI H P PF +L+ I+ QQ++ A SI +F+AL
Sbjct: 138 HLISVDERMRPLIAKHTCRAFSPEGLAEKVDPFESLSSGIISQQVSGAAAKSIKNKFVAL 197
Query: 189 CGGEAGVV-----PETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDD 243
++ P V A LR G+S RKA Y+ LA ++ +G LS + +
Sbjct: 198 FAADSAAAARFPHPSQVAATPLDTLRTAGLSQRKAEYIQGLAGRFASGELSAQMLRDAPY 257
Query: 244 KSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLE---------- 293
+ LT V G+G WSV MF F L R DV + DLGV++G+ +
Sbjct: 258 DEVLARLTAVRGLGRWSVEMFACFGLKRMDVFALGDLGVQRGMAAFEGRDVAKLRTKGGK 317
Query: 294 -ELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
+ M L +++ PYRS+ WY+WR E
Sbjct: 318 WKYMSEQDMVALSDRFAPYRSLFMWYMWRVEE 349
>gi|194018032|ref|ZP_03056638.1| DNA-3-methyladenine glycosylase II [Bacillus pumilus ATCC 7061]
gi|194010277|gb|EDW19853.1| DNA-3-methyladenine glycosylase II [Bacillus pumilus ATCC 7061]
Length = 289
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 108/213 (50%), Gaps = 9/213 (4%)
Query: 118 IARPLSSEGEVEAAIRHLRNADRQLASLIDIHP-PPTFDSFHTPFLALTRSILYQQLAFK 176
+ R E +++A H + LA + + H P FH + L + I++QQL
Sbjct: 77 MKRIFGMEHQLDAVHEHFSQTN--LAPVFERHKGTPLMLDFHL-YHCLMKCIIHQQLNLA 133
Query: 177 AGTSIYTRFIALCGGE-AGV----VPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNG 231
+ RF+ G + GV +PE + +L + LR++ S RKA Y+ D++++ +G
Sbjct: 134 FAFELTKRFVHTYGEQIEGVWFDPLPEAIASLETEDLRKLQFSQRKAEYVIDVSKRIVSG 193
Query: 232 ILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYS 291
LS + ++ D + L + GIG W+V ++ L RP++ P+ D+G++ ++ +
Sbjct: 194 SLSLEELHDLTDLEVEERLLPIRGIGPWTVQNVLMNGLGRPNLFPMADIGIQNAIKRHFD 253
Query: 292 LEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
L P +M L + W PY S AS YLWR +E
Sbjct: 254 LPAKPTKEEMVALSKDWTPYLSYASLYLWRSIE 286
>gi|152974245|ref|YP_001373762.1| DNA-3-methyladenine glycosylase II [Bacillus cytotoxicus NVH
391-98]
gi|152022997|gb|ABS20767.1| DNA-3-methyladenine glycosylase II [Bacillus cytotoxicus NVH
391-98]
Length = 287
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 102/186 (54%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 102 PLFETYAYTPLILEFDYFACLLRCIIHQQVNLKFATVLTEQFVKTYGTEKNDVFFFPTPE 161
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR S RKA Y+ LA++ G L+ S + ++ + L V GIG+
Sbjct: 162 RVAKISIEELRGQKFSQRKAEYMIGLAKQIVEGKLNLSKLEKQTEEEISAQLLPVRGIGA 221
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ +Q L+ L+ P + ++Q+ ++ PY S A+ Y
Sbjct: 222 WTVQNFLLFGLGRRNMFPKTDIGIQRALQRLFQLDNKPDDALLEQIKQECEPYCSYAALY 281
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 282 LWKSIE 287
>gi|317470764|ref|ZP_07930148.1| HhH-GPD superfamily base excision DNA repair protein [Anaerostipes
sp. 3_2_56FAA]
gi|316901753|gb|EFV23683.1| HhH-GPD superfamily base excision DNA repair protein [Anaerostipes
sp. 3_2_56FAA]
Length = 214
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 106/215 (49%), Gaps = 18/215 (8%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
E I +L++ D L ID + F AL SI+ QQ++ KA +++ R +
Sbjct: 8 EQEIGYLKSRDPVLGQAIDRIGFIKREVHTELFAALVNSIVGQQISTKAQETVWRR---I 64
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
G + V PE V T ++L+ G+S RKA Y+ A + +G L + D+ +
Sbjct: 65 KDGLSDVTPEKVGECTEEELQSFGISFRKAGYIKAAADRILSGSLDLEGLKEAGDEQVKK 124
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + G+G W+ M M FS+ RPD++ +DL +++G+++LY + P + ++
Sbjct: 125 ELTKLPGVGVWTAEMLMTFSMQRPDIVSYSDLAIQRGMRMLYHHRTIT-PKLFAKYAGRY 183
Query: 309 RPYRSVASWYLWRFVEAKGAPSSAAAVAAGAALPQ 343
PY +VAS YLW AG ALP+
Sbjct: 184 SPYGTVASLYLW--------------AVAGGALPE 204
>gi|440474100|gb|ELQ42867.1| DNA-3-methyladenine glycosylase [Magnaporthe oryzae Y34]
gi|440485926|gb|ELQ65842.1| DNA-3-methyladenine glycosylase [Magnaporthe oryzae P131]
Length = 467
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 106/219 (48%), Gaps = 23/219 (10%)
Query: 118 IARPLSSEGEVEAAIRHLRNADRQLASLIDIH-----PPPTFDSFHTPFLALTRSILYQQ 172
I P ++ +E A HL D ++ LI+ H P PF +L I+ QQ
Sbjct: 123 IKGPTTTATLLEEACAHLIRVDPRMKPLIEAHHCHIFSPEGLAEKIDPFESLCSGIISQQ 182
Query: 173 LAFKAGTSIYTRFIALCG----GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKY 228
++ A SI +F+AL GE P +V A T ++LR G+S RKA Y+ LA K+
Sbjct: 183 VSGAAARSIKAKFVALFADEKPGELFPSPSSVAAATIEKLRTAGLSQRKAEYVKGLAEKF 242
Query: 229 QNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQL 288
+G LS ++ + + L V G+G WSV MF F L DV + DLGV++G+
Sbjct: 243 ASGELSAQLFADLPYEQVLQKLIAVRGLGRWSVEMFACFGLKFMDVFSLGDLGVQRGMA- 301
Query: 289 LYSLEELPR-------------PSQMDQLCEKWRPYRSV 314
+S ++ + M +L ++++PYRS+
Sbjct: 302 AFSGRDVAKMKNSKAGKWKYMNEKDMTELSDRFKPYRSL 340
>gi|429767709|ref|ZP_19299896.1| base excision DNA repair protein, HhH-GPD family [Brevundimonas
diminuta 470-4]
gi|429189868|gb|EKY30684.1| base excision DNA repair protein, HhH-GPD family [Brevundimonas
diminuta 470-4]
Length = 217
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 87/171 (50%), Gaps = 4/171 (2%)
Query: 152 PTFDSFHTP--FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLR 209
P F+ P + L R I+ QQ++ A SI+ R + G+ V PE VLA LR
Sbjct: 32 PVFEWRLRPGGYEGLFRMIVEQQVSVAAAASIWKRVVEGLDGQ--VTPEAVLARDVDTLR 89
Query: 210 QIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSL 269
G+SG+KA Y H++AR +G + + +DD L + G+G W+ F++F
Sbjct: 90 TFGLSGQKAKYGHEIARAQTDGHIDFDHLERLDDAQAIAALVAIKGVGRWTAETFLMFCE 149
Query: 270 HRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLW 320
R DV P D+ +++ ++ E+ P Q E WRP+R+VA+ LW
Sbjct: 150 GRLDVFPGGDVALQEAMRWADRAEDRPNEKQAYARAEIWRPHRAVAAHLLW 200
>gi|423613862|ref|ZP_17589721.1| hypothetical protein IIM_04575 [Bacillus cereus VD107]
gi|401240462|gb|EJR46863.1| hypothetical protein IIM_04575 [Bacillus cereus VD107]
Length = 287
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 105/186 (56%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEA-GVV----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E GV+ PE
Sbjct: 102 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVLFFPTPE 161
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V + ++LR+ S RKA Y+ LA++ +G L + I N ++ + L + GIG+
Sbjct: 162 RVANIPIEELREQKFSQRKAEYMVGLAKRIVDGKLDLAGIENETEEEVSAQLLPIRGIGA 221
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ +Q ++ LE P + ++++ ++ PY S A+ Y
Sbjct: 222 WTVQNFLMFGLGRKNMFPKADIGIQRALQGVFQLENKPDDAFLEKVKQECEPYCSYAALY 281
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 282 LWKSIE 287
>gi|229194803|ref|ZP_04321590.1| DNA-3-methyladenine glycosylase II [Bacillus cereus m1293]
gi|228588651|gb|EEK46682.1| DNA-3-methyladenine glycosylase II [Bacillus cereus m1293]
Length = 291
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 104/186 (55%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 106 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 165
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L R +G L+ ++I ++ + L + GIG+
Sbjct: 166 IVANISIEELREQKFSQRKAEYIVGLGRSIASGTLNLASIETKAEEEISAQLLPIRGIGT 225
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++++ ++ PY S A+ Y
Sbjct: 226 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQLDDKPDDAFLEKVKQECEPYCSYAALY 285
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 286 LWKSIE 291
>gi|220904429|ref|YP_002479741.1| HhH-GPD family protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868728|gb|ACL49063.1| HhH-GPD family protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 235
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 104/193 (53%), Gaps = 11/193 (5%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIA-LCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
F AL SI+ QQ++ KA +I+ R C + PE + ++ + L+ G+S RKA+
Sbjct: 43 FNALLNSIVGQQISTKAQATIWKRMREQFCP----ITPENIGTISAESLQTCGISMRKAA 98
Query: 220 YLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIND 279
Y+ + +G L + + ++ DK + L + GIG W+ M MIFS+ RPD+L +D
Sbjct: 99 YIKSITEAVLDGSLDLARLPSLTDKEICAQLVQLKGIGVWTAEMIMIFSMQRPDILSWDD 158
Query: 280 LGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAKGAPSSAAAVAAGA 339
L +++G+++LY ++ P+ + +++ P+ + AS YLW A + A + A
Sbjct: 159 LAIQRGLRMLYRHRQIT-PALFARYRKRYSPHATTASLYLWAI-----AGGACAELKDCA 212
Query: 340 ALPQPQQEEQQQP 352
L + + ++QP
Sbjct: 213 PLKKKTKPAKRQP 225
>gi|222094221|ref|YP_002528278.1| DNA-3-methyladenine glycosylase ii [Bacillus cereus Q1]
gi|423577720|ref|ZP_17553839.1| hypothetical protein II9_04941 [Bacillus cereus MSX-D12]
gi|221238276|gb|ACM10986.1| DNA-3-methyladenine glycosylase II [Bacillus cereus Q1]
gi|401204424|gb|EJR11241.1| hypothetical protein II9_04941 [Bacillus cereus MSX-D12]
Length = 287
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 104/186 (55%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 102 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 161
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L R +G L+ ++I ++ + L + GIG+
Sbjct: 162 IVANISIEELREQKFSQRKAEYIVGLGRSIASGTLNLASIETKAEEEISAQLLPIRGIGT 221
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++++ ++ PY S A+ Y
Sbjct: 222 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQLDDKPDDAFLEKVKQECEPYCSYAALY 281
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 282 LWKSIE 287
>gi|423607753|ref|ZP_17583646.1| hypothetical protein IIK_04334 [Bacillus cereus VD102]
gi|401239950|gb|EJR46358.1| hypothetical protein IIK_04334 [Bacillus cereus VD102]
Length = 287
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 104/186 (55%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 102 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 161
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L R +G L+ ++I ++ + L + GIG+
Sbjct: 162 IVANISIEELREQKFSQRKAEYIVGLGRSIASGTLNLASIETKAEEEISAQLLPIRGIGT 221
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++++ ++ PY S A+ Y
Sbjct: 222 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQLDDKPDDAFLEKVKQECEPYCSYAALY 281
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 282 LWKSIE 287
>gi|219121055|ref|XP_002185759.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582608|gb|ACI65229.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 394
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 105/211 (49%), Gaps = 32/211 (15%)
Query: 159 TPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQ---------QLR 209
T F +L R I Q ++ K+ +++ R + + P +L L Q +
Sbjct: 152 TCFESLCRIIAGQFVSGKSAQAVWKRLLE--HARHDLTPTRILQLVSQPQGEDIEFGLQK 209
Query: 210 QIGVSGRKASYLHDLARKYQNGILSDSAIVNM-----DDKSLFT----MLTMVNGIGSWS 260
+G++ KA + DLAR +++G LS+ + + D S T L V GIG WS
Sbjct: 210 PVGLTKNKAKSIVDLARHFEDGRLSEGFLTSSTSPSGDTDSTITSIQKALLKVQGIGPWS 269
Query: 261 VHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLC------------EKW 308
V MF++F L +P+VLP+ DLGVRKG+ + +++ + + QLC E +
Sbjct: 270 VDMFLLFYLEQPNVLPLGDLGVRKGIAIHFAMRGSVKKGKQAQLCPKQDAPQIRRRLEAY 329
Query: 309 RPYRSVASWYLWRFVEAKGAPSSAAAVAAGA 339
PY+S+ ++Y+WR + AP SAA + A
Sbjct: 330 APYQSLLTYYMWRAADTPSAPDSAATLEGKA 360
>gi|326388903|ref|ZP_08210485.1| HhH-GPD [Novosphingobium nitrogenifigens DSM 19370]
gi|326206503|gb|EGD57338.1| HhH-GPD [Novosphingobium nitrogenifigens DSM 19370]
Length = 205
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 83/157 (52%), Gaps = 3/157 (1%)
Query: 164 LTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHD 223
L R+I+ QQ++ A S+++R AL G G+ P VLA + LR G+S +K Y
Sbjct: 44 LLRTIVGQQVSVAAAASVWSRLEALLG--QGMAPAAVLAASFDDLRACGLSRQKQGYARS 101
Query: 224 LARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVR 283
L + G + A+ DD++ +LT + GIG WS ++++F+ RPD+ P DL V+
Sbjct: 102 LCELVEEGAIDFEALPG-DDEAAIELLTRIKGIGRWSAEIYLLFAEGRPDIWPAGDLAVQ 160
Query: 284 KGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLW 320
G+ L L E P L + WRP+R + + W
Sbjct: 161 VGLAKLLDLPERPDERTTRSLADDWRPHRGSVAIFTW 197
>gi|327351602|gb|EGE80459.1| DNA-3-methyladenine glycosylase [Ajellomyces dermatitidis ATCC
18188]
Length = 439
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 106/264 (40%), Gaps = 69/264 (26%)
Query: 128 VEAAIRHLRNADRQLASLIDIHPPPTFDSFH-----TPFLALTRSILYQQLAFKAGTSIY 182
+E A+ HL QL +I+ HP P F PF +L I+ QQ++ A SI
Sbjct: 167 LEEAVAHLIKVAPQLRPVIEKHPCPLFSPAGLAEEIDPFNSLVSGIIGQQVSGAAAKSIK 226
Query: 183 TRFIALC---GGEAG----------VVPETVLAL-------------------------- 203
+F+AL GG G + TV+
Sbjct: 227 KKFMALFRSDGGGGGDCNSINNATATIATTVINDGGAATKNNNNMDAGEKIETAEMRYDR 286
Query: 204 -----TPQQ--------LRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
TP Q LR G+S RKA Y+ LA K+ +G LS ++ D+ + L
Sbjct: 287 DDDFPTPAQVAKCDIATLRTAGLSQRKAEYIQGLAEKFASGELSARMLLQASDEEVLEKL 346
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLE------------ELPRP 298
V G+G WSV MF F L R DV DLGV++G+ + +
Sbjct: 347 IAVRGLGKWSVEMFSCFGLKRMDVFSTGDLGVQRGMAAFVGRDVSKLKAKGGGKFKYMSE 406
Query: 299 SQMDQLCEKWRPYRSVASWYLWRF 322
+M ++ + PYRS+ WY+WR
Sbjct: 407 KEMVEVAAPFSPYRSLFMWYMWRI 430
>gi|239606632|gb|EEQ83619.1| DNA-3-methyladenine glycosylase [Ajellomyces dermatitidis ER-3]
Length = 438
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 106/264 (40%), Gaps = 69/264 (26%)
Query: 128 VEAAIRHLRNADRQLASLIDIHPPPTFDSFH-----TPFLALTRSILYQQLAFKAGTSIY 182
+E A+ HL QL +I+ HP P F PF +L I+ QQ++ A SI
Sbjct: 166 LEEAVAHLIKVAPQLRPVIEKHPCPLFSPAGLAEEIDPFNSLVSGIIGQQVSGAAAKSIK 225
Query: 183 TRFIALC---GGEAG----------VVPETVLAL-------------------------- 203
+F+AL GG G + TV+
Sbjct: 226 KKFMALFRSDGGGGGDCNSINNATATIATTVINDGGAATKNNNNMDAGEKIETAEMRYDR 285
Query: 204 -----TPQQ--------LRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
TP Q LR G+S RKA Y+ LA K+ +G LS ++ D+ + L
Sbjct: 286 DDDFPTPAQVAKCDIATLRTAGLSQRKAEYIQGLAEKFASGELSARMLLQASDEEVLEKL 345
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLE------------ELPRP 298
V G+G WSV MF F L R DV DLGV++G+ + +
Sbjct: 346 IAVRGLGKWSVEMFSCFGLKRMDVFSTGDLGVQRGMAAFVGRDVSKLKAKGGGKFKYMSE 405
Query: 299 SQMDQLCEKWRPYRSVASWYLWRF 322
+M ++ + PYRS+ WY+WR
Sbjct: 406 KEMVEVAAPFSPYRSLFMWYMWRI 429
>gi|320335587|ref|YP_004172298.1| HhH-GPD family protein [Deinococcus maricopensis DSM 21211]
gi|319756876|gb|ADV68633.1| HhH-GPD family protein [Deinococcus maricopensis DSM 21211]
Length = 199
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 85/163 (52%), Gaps = 13/163 (7%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
PF L RS++ QQL+ +A +I R AL + E + AL+ + LR G+SG K
Sbjct: 40 PFATLVRSVIGQQLSVRAANTIEARVRALAPDLSA---EQLAALSAETLRAAGLSGAKVR 96
Query: 220 YLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIND 279
+H L + +G L +V + D+ + L + GIG W+ MF++F+L RPDV D
Sbjct: 97 TVHALVARVLDGTLDFERLVTLPDEDVIAALVPLPGIGRWTAEMFLMFALGRPDVFAWGD 156
Query: 280 LGVRKGVQLLYSLEELPRPSQMD--QLCEKWRPYRSVASWYLW 320
LG+R+ ++ Y +D + W PYRS A+ Y+W
Sbjct: 157 LGLRRALERHY--------PDLDPVLVVAAWSPYRSAAARYMW 191
>gi|423473425|ref|ZP_17450167.1| hypothetical protein IEM_04729 [Bacillus cereus BAG6O-2]
gi|423556595|ref|ZP_17532898.1| hypothetical protein II3_01800 [Bacillus cereus MC67]
gi|401194869|gb|EJR01837.1| hypothetical protein II3_01800 [Bacillus cereus MC67]
gi|402425910|gb|EJV58052.1| hypothetical protein IEM_04729 [Bacillus cereus BAG6O-2]
Length = 287
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 103/186 (55%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 102 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTDQFVKRYGTEKNGVFFFPTPE 161
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ LA+ +G L + I N ++ + L + GIG+
Sbjct: 162 RVANISIEELREQKFSQRKAEYIVGLAKHIADGKLDLARIENETEEEVSAQLLPIRGIGA 221
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+R+ +Q ++ L+ P + ++++ ++ PY S A+ Y
Sbjct: 222 WTVQNFLMFGLGRKNMFPEADIGIRRALQGVFQLDNKPDDAFLEKVKQECEPYCSYAALY 281
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 282 LWKSIE 287
>gi|392965885|ref|ZP_10331304.1| HhH-GPD family protein [Fibrisoma limi BUZ 3]
gi|387844949|emb|CCH53350.1| HhH-GPD family protein [Fibrisoma limi BUZ 3]
Length = 215
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 93/178 (52%), Gaps = 6/178 (3%)
Query: 150 PPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLR 209
P P +D + +LAL SI+ QQ++ KA +I+ R + L P +LA + +LR
Sbjct: 22 PKPFYDWENDIYLALLESIVSQQISTKAADAIFRRLLGLFPDNYPH-PNALLAKSTDELR 80
Query: 210 QIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSL 269
G+S +K YL +A + M D+ + L + G+G W+V M ++F L
Sbjct: 81 SAGLSFQKIKYLQSVAEFALTNRMDRPFFDTMTDEEIVQYLIPIKGVGRWTVEMLLMFVL 140
Query: 270 HRPDVLPINDLGVRKGVQLLYS-----LEELPRPSQMDQLCEKWRPYRSVASWYLWRF 322
RPDV P++DL +R+ + Y+ L ++ ++ E WRP+R++A YLWR+
Sbjct: 141 DRPDVFPVDDLVIRQSMLRAYADQTAGLTGKALYRRLHEIAEPWRPHRTLACRYLWRW 198
>gi|423393127|ref|ZP_17370353.1| hypothetical protein ICG_04975 [Bacillus cereus BAG1X1-3]
gi|401632160|gb|EJS49949.1| hypothetical protein ICG_04975 [Bacillus cereus BAG1X1-3]
Length = 287
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 103/186 (55%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 102 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTDQFVKRYGTEKNGVFFFPTPE 161
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ LA+ G L + I N ++ + L + GIG+
Sbjct: 162 RVANISIEELREQKFSQRKAEYIVGLAKHIVGGKLDLARIENETEEEVSAQLIPIRGIGA 221
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++++ ++ PY S A+ Y
Sbjct: 222 WTVQNFLMFGLGRKNMFPKTDIGIQRAVQGVFQLDDKPDDAFLEKVKQECEPYCSYAALY 281
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 282 LWKSIE 287
>gi|55377906|ref|YP_135756.1| DNA-3-methyladenine glycosylase [Haloarcula marismortui ATCC 43049]
gi|55230631|gb|AAV46050.1| DNA-3-methyladenine glycosylase [Haloarcula marismortui ATCC 43049]
Length = 203
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 93/185 (50%), Gaps = 8/185 (4%)
Query: 138 ADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTR-FIALCGGEAGVV 196
AD + L++ H T D F L SIL QQ++ + + R F A+ V
Sbjct: 11 ADPDIGPLVETHGELTLDPASDLFERLVVSILRQQVSMASAAATRERLFDAVT-----VT 65
Query: 197 PETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGI 256
P + LR G+S +K Y++++A + S A + D+ + LT + G+
Sbjct: 66 PAGIKDADNDLLRDAGLSRQKTRYVNEVADAFLEHGYSLEAFEDAADEEIHEELTAITGV 125
Query: 257 GSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVAS 316
G W+ +M ++F+ R DV P+ DLG+RKG + + + ++M + E+W PYRS AS
Sbjct: 126 GDWTANMQLLFAFGRKDVFPVGDLGIRKGFEAVVG--DGYSRAEMREYAERWSPYRSYAS 183
Query: 317 WYLWR 321
YLWR
Sbjct: 184 LYLWR 188
>gi|407979239|ref|ZP_11160058.1| DNA-3-methyladenine glycosylase II [Bacillus sp. HYC-10]
gi|407414167|gb|EKF35828.1| DNA-3-methyladenine glycosylase II [Bacillus sp. HYC-10]
Length = 288
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 108/215 (50%), Gaps = 9/215 (4%)
Query: 118 IARPLSSEGEVEAAIRHLRNADRQLASLIDIH-PPPTFDSFHTPFLALTRSILYQQLAFK 176
+ R E ++ H + LAS+ + H P FH + L + I++QQL
Sbjct: 77 VKRIFGMEHQLHVVQDHFSQTN--LASIFERHIGMPLMLDFHL-YHCLMKCIIHQQLNLA 133
Query: 177 AGTSIYTRFIALCGGEA-GV----VPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNG 231
+ RF+ G + GV +PET+ +L LR++ S RKA Y+ D++++ +G
Sbjct: 134 FAYELTKRFVQTYGEQIDGVWFDPLPETIASLETDDLRKLQFSQRKAEYVIDVSKRIVSG 193
Query: 232 ILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYS 291
L + ++ D + L + GIG W+V ++ L R ++ P+ D+G++ ++ +
Sbjct: 194 SLCLEELHHLPDAEVEERLLPIRGIGPWTVQNVLMNGLGRHNLFPMADIGIQNAIKRHFD 253
Query: 292 LEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAK 326
L E P +M L ++W PY S AS YLWR +E +
Sbjct: 254 LPEKPTKEEMAVLSKEWAPYLSYASLYLWRSIETE 288
>gi|423646551|ref|ZP_17622121.1| hypothetical protein IKA_00338 [Bacillus cereus VD169]
gi|401287243|gb|EJR93044.1| hypothetical protein IKA_00338 [Bacillus cereus VD169]
Length = 287
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 104/186 (55%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 102 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 161
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L R +G L+ ++I ++ + L + GIG+
Sbjct: 162 IVANISIEELREQKFSQRKAEYIVGLGRSIASGTLNLASIETKAEEEVSAQLLPIRGIGT 221
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++++ ++ PY S A+ Y
Sbjct: 222 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQLDDKPDDAFLEKVKQECEPYCSYAALY 281
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 282 LWKSIE 287
>gi|261197219|ref|XP_002625012.1| DNA-3-methyladenine glycosylase [Ajellomyces dermatitidis SLH14081]
gi|239595642|gb|EEQ78223.1| DNA-3-methyladenine glycosylase [Ajellomyces dermatitidis SLH14081]
Length = 438
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 104/263 (39%), Gaps = 68/263 (25%)
Query: 128 VEAAIRHLRNADRQLASLIDIHPPPTFDSFH-----TPFLALTRSILYQQLAFKAGTSIY 182
+E A+ HL QL +I+ HP P F PF +L I+ QQ++ A SI
Sbjct: 167 LEEAVAHLIKVAPQLRPVIEKHPCPLFSPAGLAEEIDPFNSLVSGIIGQQVSGAAAKSIK 226
Query: 183 TRFIAL-----CGGEAGVVPETVLAL---------------------------------- 203
+F+AL GG+ + +
Sbjct: 227 KKFMALFRSDGGGGDCNSINSATATIATTVINDGGAATKNNNNMDAGEKIETAEMRYDRD 286
Query: 204 ----TPQQ--------LRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLT 251
TP Q LR G+S RKA Y+ LA K+ +G LS ++ D+ + L
Sbjct: 287 DDFPTPAQVAKCDIATLRTAGLSQRKAEYIQGLAEKFASGELSARMLLQASDEEVLEKLI 346
Query: 252 MVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLE------------ELPRPS 299
V G+G WSV MF F L R DV DLGV++G+ + +
Sbjct: 347 AVRGLGKWSVEMFSCFGLKRMDVFSTGDLGVQRGMAAFVGRDVSKLKAKGGGKFKYMSEK 406
Query: 300 QMDQLCEKWRPYRSVASWYLWRF 322
+M ++ + PYRS+ WY+WR
Sbjct: 407 EMVEVAAPFSPYRSLFMWYMWRI 429
>gi|228983683|ref|ZP_04143883.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228776035|gb|EEM24401.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 291
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 104/186 (55%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 106 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 165
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L R +G L+ ++I ++ + L + GIG+
Sbjct: 166 IVANISIEELREQKFSQRKAEYIVGLGRSIASGTLNLASIETKAEEEVSAQLLPIRGIGT 225
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++++ ++ PY S A+ Y
Sbjct: 226 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQLDDKPDDAFLEKVKQECEPYCSYAALY 285
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 286 LWKSIE 291
>gi|392394216|ref|YP_006430818.1| HhH-GPD superfamily base excision DNA repair protein
[Desulfitobacterium dehalogenans ATCC 51507]
gi|390525294|gb|AFM01025.1| HhH-GPD superfamily base excision DNA repair protein
[Desulfitobacterium dehalogenans ATCC 51507]
Length = 197
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 98/189 (51%), Gaps = 4/189 (2%)
Query: 132 IRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGG 191
I +L+ D L I+ + F AL S++ QQ++ KA +++ R L G
Sbjct: 10 IEYLKTRDEVLGQAIERMGMIEREVTPNLFKALISSVVSQQISKKAAETVWNRLQTLLGN 69
Query: 192 EAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLT 251
+ E ++ + ++ G+S RKA Y+ +A Q G + + + D+ + L+
Sbjct: 70 ---ISAEEIVLADLKAIQGCGMSTRKAGYIKGIAAAAQRGEVDFHKLHTLSDEEIIHSLS 126
Query: 252 MVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPY 311
+ G+G W+ M +IFSL RPDV+ DL +R+G+ Y LEEL + + + +K+ PY
Sbjct: 127 ALPGVGVWTAEMLLIFSLCRPDVVSYRDLAIRRGMMNCYVLEELSKGT-FEHYRKKYSPY 185
Query: 312 RSVASWYLW 320
SVAS YLW
Sbjct: 186 GSVASLYLW 194
>gi|229042326|ref|ZP_04190076.1| DNA-3-methyladenine glycosylase II [Bacillus cereus AH676]
gi|228726985|gb|EEL78192.1| DNA-3-methyladenine glycosylase II [Bacillus cereus AH676]
Length = 291
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 104/186 (55%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 106 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 165
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L R +G L+ ++I ++ + L + GIG+
Sbjct: 166 IVANISIEELREQKFSQRKAEYIVGLGRSIASGTLNLASIETKAEEEVSAQLLPIRGIGT 225
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++++ ++ PY S A+ Y
Sbjct: 226 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQLDDKPDDAFLEKVKQECEPYCSYAALY 285
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 286 LWKSIE 291
>gi|384178442|ref|YP_005564204.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|324324526|gb|ADY19786.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 287
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 104/186 (55%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 102 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 161
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L R +G L+ ++I ++ + L + GIG+
Sbjct: 162 IVANISIEELREQKFSQRKAEYIVGLGRSIASGTLNLASIETKAEEEVSAQLLPIRGIGT 221
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++++ ++ PY S A+ Y
Sbjct: 222 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQLDDKPDDAFLEKVKQECEPYCSYAALY 281
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 282 LWKSIE 287
>gi|425072553|ref|ZP_18475659.1| hypothetical protein HMPREF1310_01991 [Proteus mirabilis WGLW4]
gi|404597223|gb|EKA97729.1| hypothetical protein HMPREF1310_01991 [Proteus mirabilis WGLW4]
Length = 196
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 104/196 (53%), Gaps = 18/196 (9%)
Query: 129 EAAIRHLRNADRQLASLID----IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTR 184
E I L+ D++LA++++ I P T D F AL ++I+ QQ++ A T++ R
Sbjct: 7 EKEISFLKQKDKRLAAVMERIGEIKRPLTPD----LFTALIKNIIEQQISVAAATTVQQR 62
Query: 185 FIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDK 244
I LC G P + +L+ Q ++Q G++ RKA Y+ +A N L I M DK
Sbjct: 63 LITLCDGI--YTPVHIASLSVQDIQQCGMTMRKAGYIKGIADSVINHTLDLDQIPAMSDK 120
Query: 245 SLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQL 304
++ L + GIG W+ M +I SL+RPD+L D+ LY + L R ++ ++
Sbjct: 121 AVINTLIKLKGIGIWTAEMLLISSLNRPDILSWGDMR-------LYRHQSLDR-TRFERY 172
Query: 305 CEKWRPYRSVASWYLW 320
+++ PY S AS YLW
Sbjct: 173 RKRYSPYGSTASLYLW 188
>gi|402824950|ref|ZP_10874281.1| HhH-GPD [Sphingomonas sp. LH128]
gi|402261526|gb|EJU11558.1| HhH-GPD [Sphingomonas sp. LH128]
Length = 205
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 86/172 (50%), Gaps = 5/172 (2%)
Query: 149 HPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQL 208
+P P + T + L R+I+ QQ++ A S++ R AL G + PE +LA L
Sbjct: 31 YPEPRIRA--TGYATLLRTIVGQQVSVAAAASVWNRLEALLG--ETMAPEALLAAEFDAL 86
Query: 209 RQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFS 268
R G+S +K Y L G L D + DD+ L + GIG WS ++++F+
Sbjct: 87 RGCGLSRQKQGYARSLCELVVAGSL-DFDSLPADDEEAIAHLVQIKGIGRWSAEIYLLFA 145
Query: 269 LHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLW 320
RPD+ P DL V+ G+ L L E P Q +L E WRP+R A+ + W
Sbjct: 146 EGRPDIWPAGDLAVQVGLGKLLGLPERPSEKQTRELAEAWRPHRGAAAIFTW 197
>gi|365904590|ref|ZP_09442349.1| hypothetical protein LverK3_03345 [Lactobacillus versmoldensis KCTC
3814]
Length = 215
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 97/189 (51%), Gaps = 3/189 (1%)
Query: 132 IRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGG 191
+++L D+ LA I + P + + L I+ Q L K +Y R LC
Sbjct: 14 VKYLLKRDKHLAKAIQLVGPIEYRPISDGYAFLISQIIGQMLNNKVADILYDRLKKLC-- 71
Query: 192 EAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLT 251
+A + E++ L+ Q++ IG+S K Y+ +L + ++G ++ ++ + + L
Sbjct: 72 QADITIESIDKLSDQEILSIGISHSKVQYIRNLTQAVKHGQINFDQYPDISNDDIMAGLK 131
Query: 252 MVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPY 311
V GIG WS M++IF L+R DVLP D+ +G ++ ++ + S + + C KW PY
Sbjct: 132 TVKGIGDWSAKMYLIFCLNREDVLPYEDIAFLQGYGWIHKTKDYHKQSVIKK-CRKWHPY 190
Query: 312 RSVASWYLW 320
S+A+ +L+
Sbjct: 191 ESIAARFLY 199
>gi|423578820|ref|ZP_17554931.1| hypothetical protein IIA_00335 [Bacillus cereus VD014]
gi|401219751|gb|EJR26402.1| hypothetical protein IIA_00335 [Bacillus cereus VD014]
Length = 287
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 96/169 (56%), Gaps = 5/169 (2%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSG 215
F L R I++QQ+ K T + +F+ G E V PE V ++ ++LR+ S
Sbjct: 119 FACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPEIVANISIEELREQKFSQ 178
Query: 216 RKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVL 275
RKA Y+ L R +G L+ ++I N + + L + GIG+W+V F++F L R ++
Sbjct: 179 RKAEYIVGLGRSIVSGTLNLASIENGTKEEVSAQLLPIRGIGAWTVQNFLMFGLGRKNMF 238
Query: 276 PINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
P D+G+++ VQ ++ L++ P + ++++ ++ PY S A+ YLW+ +E
Sbjct: 239 PKADIGIQRAVQGIFQLDDKPDDAFLEKVKQECEPYCSYAALYLWKSIE 287
>gi|229083729|ref|ZP_04216050.1| DNA-3-methyladenine glycosylase II [Bacillus cereus Rock3-44]
gi|228699587|gb|EEL52251.1| DNA-3-methyladenine glycosylase II [Bacillus cereus Rock3-44]
Length = 291
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 101/186 (54%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T++ +F+ G E V PE
Sbjct: 106 PLFETYAYTPLVLEFDYFACLLRCIIHQQVHLKFATALTEQFVKKYGTEKNGVFFFPTPE 165
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR S RKA Y+ LA+ G L+ + ++ + L V GIG+
Sbjct: 166 RVANISVEELRNQKFSQRKAEYMIGLAKHIVEGKLNLVELEKQTEEEVSAQLLPVRGIGA 225
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ +Q L+ LE P + ++Q+ ++ PY S A+ Y
Sbjct: 226 WTVQNFLLFGLGRKNMFPKADIGIQRALQGLFQLENKPDDALLEQVKQECEPYCSYAALY 285
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 286 LWKSIE 291
>gi|452752848|ref|ZP_21952588.1| DNA-3-methyladenine glycosylase II [alpha proteobacterium JLT2015]
gi|451959920|gb|EMD82336.1| DNA-3-methyladenine glycosylase II [alpha proteobacterium JLT2015]
Length = 203
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 80/157 (50%), Gaps = 3/157 (1%)
Query: 164 LTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHD 223
L R+I+ QQ++ KA SI+ + + G VP +LA + LR G+S +KA+Y
Sbjct: 42 LLRTIIGQQVSVKAAASIWDKLAGIVGDVH--VPAVMLAASDADLRAAGLSRQKAAYARS 99
Query: 224 LARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVR 283
LA G L A+ DD+ L V GIG WS ++++F+ RPD+ P DL V+
Sbjct: 100 LAEHVSAGTLDLDALPE-DDEEAIARLVDVKGIGRWSAEIYLLFAEGRPDIWPAGDLAVQ 158
Query: 284 KGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLW 320
+ LE P Q L E WRP+R A+ +W
Sbjct: 159 IEAGRIMGLEGRPTERQTRALAEAWRPHRGAAAILMW 195
>gi|89092661|ref|ZP_01165614.1| DNA-3-methyladenine glycosylase II, putative [Neptuniibacter
caesariensis]
gi|89083173|gb|EAR62392.1| DNA-3-methyladenine glycosylase II, putative [Oceanospirillum sp.
MED92]
Length = 202
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 5/167 (2%)
Query: 163 ALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLH 222
AL I+ QQL+ +A SI + L + ++L P+QLR G+S RK Y+
Sbjct: 41 ALVSIIISQQLSTEAAASIMAKVKNLL---PDISANSILKTPPEQLRAAGLSRRKIEYVC 97
Query: 223 DLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGV 282
LA + L A+ M D +T + G+G WS ++++FSL R D+ P +DL +
Sbjct: 98 ALAEAIKTNRLDLEALKQMPDSEAINHITQLRGMGRWSAEIYLMFSLQRQDIFPADDLAI 157
Query: 283 RKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAKGAP 329
+Q L LEE P + + E W P+ SV S +LW + +GAP
Sbjct: 158 VIALQKLKGLEERPSAKEARVITEHWSPWLSVGSLFLWHYY--RGAP 202
>gi|228906230|ref|ZP_04070117.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis IBL 200]
gi|228853386|gb|EEM98156.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis IBL 200]
Length = 291
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 104/186 (55%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 106 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 165
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L R +G L+ ++I ++ + L + GIG+
Sbjct: 166 IVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIETGTEEEVGAQLLPIRGIGA 225
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++++ ++ PY S A+ Y
Sbjct: 226 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGIFQLDDKPDDAFLEKVKQECEPYCSYAALY 285
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 286 LWKSIE 291
>gi|294677715|ref|YP_003578330.1| DNA-3-methyladenine glycosylase II [Rhodobacter capsulatus SB 1003]
gi|294476535|gb|ADE85923.1| DNA-3-methyladenine glycosylase II [Rhodobacter capsulatus SB 1003]
Length = 210
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 8/209 (3%)
Query: 117 IIARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFK 176
++ R +++E +V L + + A ++D P F AL +IL QQ++
Sbjct: 1 MVGRIITTEDDVAEGAAWLAATEPRFARVLDRTGPWPLRRREDGFDALRDAILGQQVSTA 60
Query: 177 AGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDS 236
A +I R I G A + E + + LR G+S +K YL LAR +GI D
Sbjct: 61 AARAIRGRLIDAGFGAAPALAEA----SEEDLRGCGLSRQKVRYLQALAR---SGIDFD- 112
Query: 237 AIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELP 296
A+ + D + L + GIG W+V M++IF+L R DV ++DL + + ++L+ L E P
Sbjct: 113 ALRRLPDAQVIETLLPLPGIGRWTVEMYLIFALGRADVFAVDDLALAEAARMLFDLPERP 172
Query: 297 RPSQMDQLCEKWRPYRSVASWYLWRFVEA 325
+P L W P+R+VA+ LW + A
Sbjct: 173 KPRAFGTLSAAWSPWRAVAARGLWAYYAA 201
>gi|338998391|ref|ZP_08637065.1| DNA repair protein [Halomonas sp. TD01]
gi|338764708|gb|EGP19666.1| DNA repair protein [Halomonas sp. TD01]
Length = 203
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 85/173 (49%), Gaps = 13/173 (7%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPE----TVLALTPQQLRQIGVSGR 216
F +I+ QQ++ +A +I +R AL +PE V+ + Q LR G+S R
Sbjct: 39 FATFFSTIVSQQISTEAARAIMSRVKAL-------LPELSAKAVMDVEDQALRDAGLSWR 91
Query: 217 KASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLP 276
K +Y LA G S + + D +T + G G WS ++++FSL R D+ P
Sbjct: 92 KVAYAKGLAEAELAGTFSADGLALLSDDEAIAAITQLRGFGRWSAEIYLMFSLQRMDIFP 151
Query: 277 INDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAKGAP 329
+DL +R + L E P P Q QL E W P+RSV S +LW + +G P
Sbjct: 152 ADDLALRVALGRLKKREGKPTPKQARQLVEHWGPWRSVGSLFLWHYY--RGEP 202
>gi|229015809|ref|ZP_04172785.1| DNA-3-methyladenine glycosylase II [Bacillus cereus AH1273]
gi|229022016|ref|ZP_04178572.1| DNA-3-methyladenine glycosylase II [Bacillus cereus AH1272]
gi|228739272|gb|EEL89712.1| DNA-3-methyladenine glycosylase II [Bacillus cereus AH1272]
gi|228745468|gb|EEL95494.1| DNA-3-methyladenine glycosylase II [Bacillus cereus AH1273]
Length = 291
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 103/186 (55%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 106 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTDQFVKRYGTEKNGVFFFPTPE 165
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ LA+ G L + I N ++ + L + GIG+
Sbjct: 166 RVANISIEELREQKFSQRKAEYIVGLAKHIVGGKLDLARIENETEEEVSAQLLPIRGIGA 225
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++++ ++ PY S A+ Y
Sbjct: 226 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQLDDKPDDAFLEKVKQECEPYCSYAALY 285
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 286 LWKSIE 291
>gi|423370309|ref|ZP_17347731.1| hypothetical protein IC3_05400 [Bacillus cereus VD142]
gi|401074248|gb|EJP82653.1| hypothetical protein IC3_05400 [Bacillus cereus VD142]
Length = 287
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 102/186 (54%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 102 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTDQFVKRYGTEKNGVFFFPTPE 161
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ LA+ G L + I N ++ + L + GIG+
Sbjct: 162 RVANISIEELREQKFSQRKAEYIVGLAKHVVGGTLDLARIENETEEEVSAQLLPIRGIGA 221
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L+ P + ++++ ++ PY S A+ Y
Sbjct: 222 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQLDNKPDDAFLEKVKQECEPYCSYAALY 281
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 282 LWKSIE 287
>gi|156043143|ref|XP_001588128.1| hypothetical protein SS1G_10574 [Sclerotinia sclerotiorum 1980]
gi|154694962|gb|EDN94700.1| hypothetical protein SS1G_10574 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 418
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 12/180 (6%)
Query: 122 LSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFH-----TPFLALTRSILYQQLAFK 176
+S+ ++ A+ HL + +L +I+ HP F + PF AL I+ QQ++
Sbjct: 198 ISTSDILDKALEHLIKVEPKLKPIIEKHPCRIFSAEGLAEEIEPFRALVSGIISQQVSGA 257
Query: 177 AGTSIYTRFIALC-------GGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQ 229
A SI +F+AL P ++A +LR G+S RKA Y+ LA K+
Sbjct: 258 AAKSIKAKFVALFNPPDSDPSTHTFPTPSAIVATDLARLRTAGLSQRKAEYISGLALKFT 317
Query: 230 NGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLL 289
+G L+ +++ + +F L V G+G WSV MF F+L R DV DLGV++G+ L
Sbjct: 318 DGELTTQFLLSASYEEVFASLIQVRGLGKWSVEMFACFALKRLDVFSTGDLGVQRGMAAL 377
>gi|423421415|ref|ZP_17398504.1| hypothetical protein IE3_04887 [Bacillus cereus BAG3X2-1]
gi|401098581|gb|EJQ06593.1| hypothetical protein IE3_04887 [Bacillus cereus BAG3X2-1]
Length = 287
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 103/186 (55%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 102 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTDQFVKRYGTEKNGVFFFPTPE 161
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ LA+ G L + I N ++ + L + GIG+
Sbjct: 162 RVANISIEELREQKFSQRKAEYIVGLAKHIVGGKLDLARIENETEEEVSAQLLPIRGIGA 221
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++++ ++ PY S A+ Y
Sbjct: 222 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQLDDKPDDAFLEKVKQECEPYCSYAALY 281
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 282 LWKSIE 287
>gi|171694385|ref|XP_001912117.1| hypothetical protein [Podospora anserina S mat+]
gi|170947141|emb|CAP73946.1| unnamed protein product [Podospora anserina S mat+]
Length = 428
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 100/219 (45%), Gaps = 29/219 (13%)
Query: 128 VEAAIRHLRNADRQLASLIDIH-----PPPTFDSFHTPFLALTRSILYQQLAFKAGTSIY 182
+E A HL D ++ LI+ H P PF +L I+ QQ++ A +I
Sbjct: 210 LEEACAHLIKVDPRMKPLIEKHHCHIFSPEGLSEKIDPFESLASGIISQQVSGAAAKAIK 269
Query: 183 TRFIALC--GGEAGV---------VPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNG 231
RFI+L G + P V+ + + LR G+S RKA YL LA+K+ +G
Sbjct: 270 NRFISLFYPGNDTTTTTHEKKKFPTPADVIGKSIETLRTAGLSQRKAEYLLGLAQKFVSG 329
Query: 232 ILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYS 291
L+ + + + + L V G+G WSV MF F L R DV DLGV++G+
Sbjct: 330 ELTAQMLADAPYEEVLEKLIAVRGLGRWSVEMFACFGLKRMDVFSTGDLGVQRGMAAFVG 389
Query: 292 LE-------------ELPRPSQMDQLCEKWRPYRSVASW 317
+ + +M+++ E +RPYRS+ W
Sbjct: 390 RDVGKLKAKGGGNKWKYMSEREMEEIAEGFRPYRSLFMW 428
>gi|359407860|ref|ZP_09200334.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[SAR116 cluster alpha proteobacterium HIMB100]
gi|356677223|gb|EHI49570.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[SAR116 cluster alpha proteobacterium HIMB100]
Length = 214
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 97/187 (51%), Gaps = 11/187 (5%)
Query: 149 HPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTP-QQ 207
+PP F+ F +L R IL QQ++ + +++ R E G+ LA P +
Sbjct: 35 NPPDRFEP--AQFSSLVRIILGQQISRQVAVALWGRM-----SEQGLTDAQALAPLPYEN 87
Query: 208 LRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIF 267
L+ IG+S RKA Y+ DLAR NG L+ + + D ++ T L GIG W+V + +F
Sbjct: 88 LQSIGLSRRKAEYIIDLARAETNGELNLTELNKADSETFTTKLISYRGIGGWTVSNYRLF 147
Query: 268 SLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVAS---WYLWRFVE 324
L + P NDL + + V+ L L++ P ++MD+ + W PYR A+ W+L+ +
Sbjct: 148 CLADFNAWPGNDLALMEAVKRLKHLDQRPSHTEMDRFADGWHPYRGAAALMLWHLYSCLV 207
Query: 325 AKGAPSS 331
G P+
Sbjct: 208 RDGTPTG 214
>gi|257790302|ref|YP_003180908.1| HhH-GPD family protein [Eggerthella lenta DSM 2243]
gi|325830445|ref|ZP_08163902.1| base excision DNA repair protein, HhH-GPD family [Eggerthella sp.
HGA1]
gi|257474199|gb|ACV54519.1| HhH-GPD family protein [Eggerthella lenta DSM 2243]
gi|325487912|gb|EGC90350.1| base excision DNA repair protein, HhH-GPD family [Eggerthella sp.
HGA1]
Length = 219
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 87/160 (54%), Gaps = 4/160 (2%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASY 220
F AL I+ QQ+A KA T+I+ R + G V PE + A + +L+Q+G+S RK Y
Sbjct: 44 FAALVNCIVGQQIATKAQTTIWNRMLERFGE---VTPEAMAACSDDELQQVGISFRKVGY 100
Query: 221 LHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDL 280
+ A + +G + + + D + L+ + GIG W+ M M FS+ RP++L DL
Sbjct: 101 IKGAAARVLSGEVDLEGLAELSDDEVCRTLSALPGIGVWTAEMLMTFSMQRPNILSWGDL 160
Query: 281 GVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLW 320
+ +G+++++ + P + ++ PY SVAS YLW
Sbjct: 161 AIHRGLRMVHHHRRIT-PELFAKYRRRYTPYGSVASLYLW 199
>gi|22126356|ref|NP_669779.1| DNA repair enzyme [Yersinia pestis KIM10+]
gi|45441376|ref|NP_992915.1| glycosidase [Yersinia pestis biovar Microtus str. 91001]
gi|51596043|ref|YP_070234.1| DNA-3-methyladenine glycosidase [Yersinia pseudotuberculosis IP
32953]
gi|108807206|ref|YP_651122.1| putative glycosidase [Yersinia pestis Antiqua]
gi|108812450|ref|YP_648217.1| glycosidase [Yersinia pestis Nepal516]
gi|145598578|ref|YP_001162654.1| glycosidase [Yersinia pestis Pestoides F]
gi|149366218|ref|ZP_01888253.1| putative glycosidase [Yersinia pestis CA88-4125]
gi|153950825|ref|YP_001401257.1| base excision DNA repair protein [Yersinia pseudotuberculosis IP
31758]
gi|162418266|ref|YP_001606487.1| base excision DNA repair protein [Yersinia pestis Angola]
gi|165925979|ref|ZP_02221811.1| base excision DNA repair protein, HhH-GPD family [Yersinia pestis
biovar Orientalis str. F1991016]
gi|165938766|ref|ZP_02227321.1| base excision DNA repair protein, HhH-GPD family [Yersinia pestis
biovar Orientalis str. IP275]
gi|166010900|ref|ZP_02231798.1| base excision DNA repair protein, HhH-GPD family [Yersinia pestis
biovar Antiqua str. E1979001]
gi|166210564|ref|ZP_02236599.1| base excision DNA repair protein, HhH-GPD family [Yersinia pestis
biovar Antiqua str. B42003004]
gi|167401056|ref|ZP_02306559.1| base excision DNA repair protein, HhH-GPD family [Yersinia pestis
biovar Antiqua str. UG05-0454]
gi|167420209|ref|ZP_02311962.1| base excision DNA repair protein, HhH-GPD family [Yersinia pestis
biovar Orientalis str. MG05-1020]
gi|167425801|ref|ZP_02317554.1| base excision DNA repair protein, HhH-GPD family [Yersinia pestis
biovar Mediaevalis str. K1973002]
gi|167468926|ref|ZP_02333630.1| base excision DNA repair protein, HhH-GPD family [Yersinia pestis
FV-1]
gi|170024612|ref|YP_001721117.1| HhH-GPD family protein [Yersinia pseudotuberculosis YPIII]
gi|186895148|ref|YP_001872260.1| HhH-GPD family protein [Yersinia pseudotuberculosis PB1/+]
gi|218928955|ref|YP_002346830.1| glycosidase [Yersinia pestis CO92]
gi|229896281|ref|ZP_04511451.1| putative glycosidase [Yersinia pestis Pestoides A]
gi|229897217|ref|ZP_04512373.1| putative glycosidase [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229897944|ref|ZP_04513095.1| putative glycosidase [Yersinia pestis biovar Orientalis str. India
195]
gi|229902825|ref|ZP_04517942.1| putative glycosidase [Yersinia pestis Nepal516]
gi|270486613|ref|ZP_06203687.1| base excision DNA repair protein, HhH-GPD family [Yersinia pestis
KIM D27]
gi|294504001|ref|YP_003568063.1| putative glycosidase [Yersinia pestis Z176003]
gi|384122218|ref|YP_005504838.1| putative glycosidase [Yersinia pestis D106004]
gi|384140275|ref|YP_005522977.1| putative glycosidase [Yersinia pestis A1122]
gi|384414923|ref|YP_005624285.1| putative glycosidase [Yersinia pestis biovar Medievalis str. Harbin
35]
gi|420546633|ref|ZP_15044604.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-01]
gi|420551954|ref|ZP_15049363.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-02]
gi|420557509|ref|ZP_15054253.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-03]
gi|420563003|ref|ZP_15059096.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-04]
gi|420568044|ref|ZP_15063670.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-05]
gi|420573747|ref|ZP_15068841.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-06]
gi|420579025|ref|ZP_15073627.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-07]
gi|420584354|ref|ZP_15078463.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-08]
gi|420589561|ref|ZP_15083150.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-09]
gi|420594871|ref|ZP_15087932.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-10]
gi|420600578|ref|ZP_15093024.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-11]
gi|420605973|ref|ZP_15097865.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-12]
gi|420611341|ref|ZP_15102710.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-13]
gi|420616709|ref|ZP_15107436.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-14]
gi|420622038|ref|ZP_15112171.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-15]
gi|420627115|ref|ZP_15116775.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-16]
gi|420632323|ref|ZP_15121470.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-19]
gi|420637437|ref|ZP_15126053.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-25]
gi|420642977|ref|ZP_15131077.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-29]
gi|420648180|ref|ZP_15135815.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-32]
gi|420653826|ref|ZP_15140887.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-34]
gi|420659306|ref|ZP_15145813.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-36]
gi|420664626|ref|ZP_15150575.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-42]
gi|420669535|ref|ZP_15155030.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-45]
gi|420674868|ref|ZP_15159885.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-46]
gi|420680462|ref|ZP_15164949.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-47]
gi|420685745|ref|ZP_15169672.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-48]
gi|420690927|ref|ZP_15174250.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-52]
gi|420696728|ref|ZP_15179333.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-53]
gi|420702247|ref|ZP_15183937.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-54]
gi|420708010|ref|ZP_15188754.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-55]
gi|420713417|ref|ZP_15193598.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-56]
gi|420718845|ref|ZP_15198329.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-58]
gi|420724405|ref|ZP_15203141.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-59]
gi|420730007|ref|ZP_15208155.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-60]
gi|420735048|ref|ZP_15212715.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-61]
gi|420740515|ref|ZP_15217638.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-63]
gi|420746006|ref|ZP_15222388.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-64]
gi|420751656|ref|ZP_15227300.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-65]
gi|420757114|ref|ZP_15231903.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-66]
gi|420762809|ref|ZP_15236672.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-71]
gi|420765762|ref|ZP_15239361.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-72]
gi|420773033|ref|ZP_15245880.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-76]
gi|420778477|ref|ZP_15250714.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-88]
gi|420784040|ref|ZP_15255580.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-89]
gi|420789296|ref|ZP_15260253.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-90]
gi|420794782|ref|ZP_15265197.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-91]
gi|420799833|ref|ZP_15269735.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-92]
gi|420805231|ref|ZP_15274607.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-93]
gi|420810526|ref|ZP_15279387.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-94]
gi|420816182|ref|ZP_15284471.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-95]
gi|420821382|ref|ZP_15289164.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-96]
gi|420826473|ref|ZP_15293722.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-98]
gi|420832250|ref|ZP_15298946.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-99]
gi|420837061|ref|ZP_15303287.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-100]
gi|420842221|ref|ZP_15307964.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-101]
gi|420847868|ref|ZP_15313049.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-102]
gi|420853340|ref|ZP_15317802.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-103]
gi|420858798|ref|ZP_15322500.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-113]
gi|421763314|ref|ZP_16200109.1| putative glycosidase [Yersinia pestis INS]
gi|21959340|gb|AAM86030.1|AE013851_2 putative DNA repair enzyme [Yersinia pestis KIM10+]
gi|45436236|gb|AAS61792.1| putative glycosidase [Yersinia pestis biovar Microtus str. 91001]
gi|51589325|emb|CAH20947.1| putative DNA-3-methyladenine glycosidase [Yersinia
pseudotuberculosis IP 32953]
gi|108776098|gb|ABG18617.1| glycosidase [Yersinia pestis Nepal516]
gi|108779119|gb|ABG13177.1| putative glycosidase [Yersinia pestis Antiqua]
gi|115347566|emb|CAL20475.1| putative glycosidase [Yersinia pestis CO92]
gi|145210274|gb|ABP39681.1| glycosidase [Yersinia pestis Pestoides F]
gi|149292631|gb|EDM42705.1| putative glycosidase [Yersinia pestis CA88-4125]
gi|152962320|gb|ABS49781.1| base excision DNA repair protein, HhH-GPD family [Yersinia
pseudotuberculosis IP 31758]
gi|162351081|gb|ABX85029.1| base excision DNA repair protein, HhH-GPD family [Yersinia pestis
Angola]
gi|165913380|gb|EDR32002.1| base excision DNA repair protein, HhH-GPD family [Yersinia pestis
biovar Orientalis str. IP275]
gi|165922183|gb|EDR39360.1| base excision DNA repair protein, HhH-GPD family [Yersinia pestis
biovar Orientalis str. F1991016]
gi|165990244|gb|EDR42545.1| base excision DNA repair protein, HhH-GPD family [Yersinia pestis
biovar Antiqua str. E1979001]
gi|166207744|gb|EDR52224.1| base excision DNA repair protein, HhH-GPD family [Yersinia pestis
biovar Antiqua str. B42003004]
gi|166961904|gb|EDR57925.1| base excision DNA repair protein, HhH-GPD family [Yersinia pestis
biovar Orientalis str. MG05-1020]
gi|167049445|gb|EDR60853.1| base excision DNA repair protein, HhH-GPD family [Yersinia pestis
biovar Antiqua str. UG05-0454]
gi|167055200|gb|EDR64997.1| base excision DNA repair protein, HhH-GPD family [Yersinia pestis
biovar Mediaevalis str. K1973002]
gi|169751146|gb|ACA68664.1| HhH-GPD family protein [Yersinia pseudotuberculosis YPIII]
gi|186698174|gb|ACC88803.1| HhH-GPD family protein [Yersinia pseudotuberculosis PB1/+]
gi|229680272|gb|EEO76371.1| putative glycosidase [Yersinia pestis Nepal516]
gi|229688985|gb|EEO81050.1| putative glycosidase [Yersinia pestis biovar Orientalis str. India
195]
gi|229693554|gb|EEO83603.1| putative glycosidase [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229701204|gb|EEO89233.1| putative glycosidase [Yersinia pestis Pestoides A]
gi|262361814|gb|ACY58535.1| putative glycosidase [Yersinia pestis D106004]
gi|270335117|gb|EFA45894.1| base excision DNA repair protein, HhH-GPD family [Yersinia pestis
KIM D27]
gi|294354460|gb|ADE64801.1| putative glycosidase [Yersinia pestis Z176003]
gi|320015427|gb|ADV98998.1| putative glycosidase [Yersinia pestis biovar Medievalis str. Harbin
35]
gi|342855404|gb|AEL73957.1| putative glycosidase [Yersinia pestis A1122]
gi|391427290|gb|EIQ89386.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-01]
gi|391428758|gb|EIQ90683.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-02]
gi|391430132|gb|EIQ91887.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-03]
gi|391442555|gb|EIR02944.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-04]
gi|391444266|gb|EIR04506.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-05]
gi|391447276|gb|EIR07210.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-06]
gi|391459646|gb|EIR18408.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-07]
gi|391460753|gb|EIR19425.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-08]
gi|391462717|gb|EIR21195.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-09]
gi|391475753|gb|EIR32927.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-10]
gi|391477370|gb|EIR34401.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-11]
gi|391477802|gb|EIR34786.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-12]
gi|391491799|gb|EIR47319.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-13]
gi|391492770|gb|EIR48190.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-15]
gi|391494791|gb|EIR49981.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-14]
gi|391507311|gb|EIR61149.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-16]
gi|391507758|gb|EIR61557.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-19]
gi|391512432|gb|EIR65749.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-25]
gi|391522971|gb|EIR75323.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-29]
gi|391525632|gb|EIR77754.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-34]
gi|391526456|gb|EIR78479.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-32]
gi|391538705|gb|EIR89491.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-36]
gi|391541246|gb|EIR91805.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-42]
gi|391542761|gb|EIR93168.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-45]
gi|391556472|gb|EIS05551.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-46]
gi|391556899|gb|EIS05945.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-47]
gi|391558066|gb|EIS06986.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-48]
gi|391571614|gb|EIS18940.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-52]
gi|391572309|gb|EIS19555.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-53]
gi|391581057|gb|EIS26984.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-54]
gi|391584414|gb|EIS29954.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-55]
gi|391587528|gb|EIS32679.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-56]
gi|391600208|gb|EIS43759.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-58]
gi|391600964|gb|EIS44432.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-60]
gi|391602549|gb|EIS45827.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-59]
gi|391615484|gb|EIS57244.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-61]
gi|391616270|gb|EIS57946.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-63]
gi|391621686|gb|EIS62702.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-64]
gi|391627497|gb|EIS67695.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-65]
gi|391638017|gb|EIS76870.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-66]
gi|391638580|gb|EIS77367.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-71]
gi|391646738|gb|EIS84449.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-72]
gi|391650650|gb|EIS87909.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-76]
gi|391655715|gb|EIS92421.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-88]
gi|391660083|gb|EIS96278.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-89]
gi|391663955|gb|EIS99739.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-90]
gi|391671064|gb|EIT06043.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-91]
gi|391681516|gb|EIT15468.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-93]
gi|391682985|gb|EIT16799.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-92]
gi|391683781|gb|EIT17524.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-94]
gi|391695386|gb|EIT27961.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-95]
gi|391698869|gb|EIT31123.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-96]
gi|391700159|gb|EIT32280.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-98]
gi|391709575|gb|EIT40734.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-99]
gi|391716177|gb|EIT46649.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-100]
gi|391717010|gb|EIT47415.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-101]
gi|391727966|gb|EIT57119.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-102]
gi|391730489|gb|EIT59315.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-103]
gi|391735288|gb|EIT63451.1| hhH-GPD superbase excision DNA repair family protein [Yersinia
pestis PY-113]
gi|411176215|gb|EKS46235.1| putative glycosidase [Yersinia pestis INS]
Length = 203
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 106/199 (53%), Gaps = 14/199 (7%)
Query: 126 GEVEAAIRHLRNADRQLASLID----IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSI 181
GE E I HL+ D+++A+ I+ + P + D F AL R+I+ QQ++ KA ++
Sbjct: 6 GETE--INHLKRRDKKMAAAIERLGMLERPLSPDLFA----ALIRNIVDQQISVKAAQTV 59
Query: 182 YTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNM 241
TR L G + P TV A + + +++ G++ RKA Y+ A NG L S I +
Sbjct: 60 NTRLTLLLGS---ITPATVAAASAEAIQRCGMTMRKAGYIKGAADAAINGSLDLSVIAQL 116
Query: 242 DDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQM 301
D + T L+ ++G+G W+ M +I SL RPD++ DL +R+G+ LY + LPR
Sbjct: 117 PDNEVITQLSRLDGVGVWTAEMLLISSLSRPDIVSWGDLAIRRGMMNLYRHKTLPRERFE 176
Query: 302 DQLCEKWRPYRSVASWYLW 320
PY + AS YLW
Sbjct: 177 RYRRRY-TPYGTTASLYLW 194
>gi|423526019|ref|ZP_17502471.1| hypothetical protein IGC_05381 [Bacillus cereus HuA4-10]
gi|401164845|gb|EJQ72177.1| hypothetical protein IGC_05381 [Bacillus cereus HuA4-10]
Length = 287
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 103/186 (55%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 102 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTDQFVKRYGTEKNGVFFFPTPE 161
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ LA+ G L + I N ++ + L + GIG+
Sbjct: 162 RVANISIEELREQKFSQRKAEYIVGLAKHIGGGKLDLARIGNETEEEVSAQLLPIRGIGA 221
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++++ ++ PY S A+ Y
Sbjct: 222 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQLDDKPDDAFLEKVKQECEPYCSYAALY 281
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 282 LWKSIE 287
>gi|421078129|ref|ZP_15539088.1| HhH-GPD family protein [Pelosinus fermentans JBW45]
gi|392523714|gb|EIW46881.1| HhH-GPD family protein [Pelosinus fermentans JBW45]
Length = 206
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 108/191 (56%), Gaps = 4/191 (2%)
Query: 132 IRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGG 191
I +L+N D+ L + + + F AL +I+ QQ++ KA +++ R + L
Sbjct: 16 IEYLQNVDQILGAAMKRLGKIDREVIPDLFTALIYAIVGQQISVKAAYTVWHR-MQLHFE 74
Query: 192 EAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLT 251
E ++P+ + T ++++Q G+S RKA Y+ ++ G L + ++ D+ + L+
Sbjct: 75 E--MIPQHIALATVEEIQQCGMSTRKAIYIKNIGEAVMYGSLKLMELYDLSDEEVIKRLS 132
Query: 252 MVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPY 311
+NGIG W+ M ++ S+ RPD++ D+ +R+G+ LY+L ++ + Q ++ +++ PY
Sbjct: 133 KMNGIGVWTAEMLLLNSMERPDIVSWGDIAIRRGMMNLYNLTDITKE-QFEKYKKQYSPY 191
Query: 312 RSVASWYLWRF 322
SVAS YLW+
Sbjct: 192 GSVASIYLWKL 202
>gi|423074537|ref|ZP_17063263.1| base excision DNA repair protein, HhH-GPD family
[Desulfitobacterium hafniense DP7]
gi|361854585|gb|EHL06644.1| base excision DNA repair protein, HhH-GPD family
[Desulfitobacterium hafniense DP7]
Length = 198
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 99/193 (51%), Gaps = 12/193 (6%)
Query: 132 IRHLRNADRQLASLID----IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIA 187
I HL+ D+ L I+ I T D F AL S++ QQ++ KA +++ R
Sbjct: 11 IEHLKTRDKVLGQAIERIGMIERGITPDLFE----ALISSVVSQQISKKAAETVWNRLQT 66
Query: 188 LCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLF 247
L G + E + + ++ G+S RKA Y+ +A Q G + + + D+ +
Sbjct: 67 LLGE---ISAEKIALADLEAIQGCGMSMRKAGYIKGVAAAAQRGEVDFQELPTLSDEEII 123
Query: 248 TMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEK 307
L+ + G+G W+ M +I SL RPDV+ DL +R+G+ Y LEEL + + + +K
Sbjct: 124 QSLSALPGVGVWTAEMLLIHSLCRPDVVSYRDLAIRRGMMNCYGLEELSKET-FEHYRKK 182
Query: 308 WRPYRSVASWYLW 320
+ PY SVAS YLW
Sbjct: 183 YSPYGSVASLYLW 195
>gi|89894825|ref|YP_518312.1| hypothetical protein DSY2079 [Desulfitobacterium hafniense Y51]
gi|219669264|ref|YP_002459699.1| HhH-GPD family protein [Desulfitobacterium hafniense DCB-2]
gi|89334273|dbj|BAE83868.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219539524|gb|ACL21263.1| HhH-GPD family protein [Desulfitobacterium hafniense DCB-2]
Length = 198
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 99/193 (51%), Gaps = 12/193 (6%)
Query: 132 IRHLRNADRQLASLID----IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIA 187
I HL+ D+ L I+ I T D F AL S++ QQ++ KA +++ R
Sbjct: 11 IEHLKTRDKVLGQAIERIGMIERGITPDLFE----ALISSVVSQQISKKAAETVWNRLQT 66
Query: 188 LCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLF 247
L G + E + + ++ G+S RKA Y+ +A Q G + + + D+ +
Sbjct: 67 LLGE---ISAEKIALADLEAIQGCGMSMRKAGYIKGVAAAAQRGEVDFQELPTLSDEEII 123
Query: 248 TMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEK 307
L+ + G+G W+ M +I SL RPDV+ DL +R+G+ Y LEEL + + + +K
Sbjct: 124 QSLSALPGVGVWTAEMLLIHSLCRPDVVSYRDLAIRRGMMNCYGLEELSKET-FEHYRKK 182
Query: 308 WRPYRSVASWYLW 320
+ PY SVAS YLW
Sbjct: 183 YSPYGSVASLYLW 195
>gi|329896444|ref|ZP_08271522.1| HhH-GPD [gamma proteobacterium IMCC3088]
gi|328921762|gb|EGG29134.1| HhH-GPD [gamma proteobacterium IMCC3088]
Length = 206
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 86/165 (52%), Gaps = 5/165 (3%)
Query: 162 LALTRSILYQQLAFKAGTSIYTRFIALCG-GEAGVVPETVLALTPQQLRQIGVSGRKASY 220
+AL R I+ QQL+ KA +I R L G G +P + + +LR +G+S K Y
Sbjct: 42 MALVRIIVGQQLSTKAAATINQRLSDLLGDGGYSNIP----SFSDDELRAVGMSRPKIRY 97
Query: 221 LHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDL 280
L L G L + +MDD+S+ LT + G G WS HM+++F+L R DV P DL
Sbjct: 98 LRALTDALLTGELVLADFPSMDDESVVKALTALPGFGRWSAHMYLLFNLQRTDVWPTGDL 157
Query: 281 GVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEA 325
VR G+ + ++++Q E+WRP+RS S W + A
Sbjct: 158 AVRVGISRMVGASGRLTEAELEQWGERWRPHRSALSLLAWHYYGA 202
>gi|229003419|ref|ZP_04161239.1| DNA-3-methyladenine glycosylase II [Bacillus mycoides Rock1-4]
gi|228757797|gb|EEM07022.1| DNA-3-methyladenine glycosylase II [Bacillus mycoides Rock1-4]
Length = 267
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 113/222 (50%), Gaps = 20/222 (9%)
Query: 123 SSEGEVEAAIRHLRNADRQLASLIDIHPP-------PTFDSF-HTP-------FLALTRS 167
S GE E ++ + + + S DI P F+++ +TP F L R
Sbjct: 46 SQTGEQEKVMKRIYSIFQWNESFQDIQTHFRNTSLRPLFETYAYTPLVLEFDYFACLLRC 105
Query: 168 ILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSGRKASYLH 222
I++QQ+ K TS+ +F+ G E V PE V ++ ++LR S RKA Y+
Sbjct: 106 IIHQQVHLKFATSLTEQFVKRYGTEKNGVFFFPTPERVANISIEELRNQKFSQRKAEYMV 165
Query: 223 DLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGV 282
LA+ G L+ + ++ + L V GIG+W+V F++F L R ++ P D+G+
Sbjct: 166 GLAKHIVEGKLNLVELEKQTEEVVAAQLLPVRGIGAWTVQNFLLFGLGRKNMFPKADIGI 225
Query: 283 RKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
++ +Q ++ LE P + ++++ ++ PY S A+ YLW+ +E
Sbjct: 226 QRALQGIFQLENKPDDAFLEKMKQECEPYCSYAALYLWKSIE 267
>gi|229159572|ref|ZP_04287586.1| DNA-3-methyladenine glycosylase II [Bacillus cereus R309803]
gi|228623874|gb|EEK80686.1| DNA-3-methyladenine glycosylase II [Bacillus cereus R309803]
Length = 287
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 102/186 (54%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 102 PLFETYAYTPLILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 161
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ LA+ G L + I N ++ + L + GIG+
Sbjct: 162 IVANISIEELREQKFSQRKAEYMVGLAKCIIGGKLDLTRIENETEEGVAAQLLPIRGIGA 221
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++ + ++ PY S A+ Y
Sbjct: 222 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQLDDKPSDAFLENVKQECEPYCSYAALY 281
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 282 LWKSIE 287
>gi|407928598|gb|EKG21452.1| hypothetical protein MPH_01250 [Macrophomina phaseolina MS6]
Length = 377
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 78/164 (47%), Gaps = 18/164 (10%)
Query: 177 AGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSGRKASYLHDLARKYQNG 231
A SI +FIAL P V A LR G+SGRKA Y+ LA K+ +G
Sbjct: 203 AAKSIQNKFIALFSNSNDSSSFFPSPAQVAAAELSLLRTAGLSGRKAEYVKGLAEKFASG 262
Query: 232 ILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV----- 286
LS +V D + L V G+G WSV MF F+L R DV DLGV++G+
Sbjct: 263 ELSAQMLVEASDAEVLEKLVAVRGLGRWSVEMFACFALKRTDVFSTGDLGVQRGMAAWLG 322
Query: 287 QLLYSLEELPRPSQMDQLCEK--------WRPYRSVASWYLWRF 322
+ + L+ + + L EK + PYRS+ WY+WR
Sbjct: 323 KDVAKLKANGKGGKWKYLSEKEMLDRSAPFAPYRSLFMWYMWRI 366
>gi|374581277|ref|ZP_09654371.1| HhH-GPD superfamily base excision DNA repair protein
[Desulfosporosinus youngiae DSM 17734]
gi|374417359|gb|EHQ89794.1| HhH-GPD superfamily base excision DNA repair protein
[Desulfosporosinus youngiae DSM 17734]
Length = 231
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 101/194 (52%), Gaps = 8/194 (4%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTP--FLALTRSILYQQLAFKAGTSIYTRFI 186
E I HL+ D L + ID D P F+AL SI+ QQ++ KA +I+ R
Sbjct: 11 EKEIEHLKAKDPILGAAID--EVGHIDRVVIPDMFMALVNSIVGQQISTKAQATIWER-- 66
Query: 187 ALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSL 246
+ A + PE + ++ + L+ G+S RKA Y+ ++A +G L + + M D +
Sbjct: 67 -MQNQFAPLTPENIGIISAEDLQTCGISMRKALYIKEIAAAVLDGSLDLAHLHTMTDDEI 125
Query: 247 FTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCE 306
L + GIG W+ M M FS+ R D++ +DL + +G++++Y ++ P +
Sbjct: 126 CKRLCRIKGIGVWTAEMLMTFSMQRMDIMSWDDLAIHRGLRMIYHHRKIT-PELFAKYKR 184
Query: 307 KWRPYRSVASWYLW 320
++ PY +VAS YLW
Sbjct: 185 RYSPYATVASLYLW 198
>gi|423381545|ref|ZP_17358828.1| hypothetical protein IC9_04897 [Bacillus cereus BAG1O-2]
gi|423444607|ref|ZP_17421512.1| hypothetical protein IEA_04936 [Bacillus cereus BAG4X2-1]
gi|423450434|ref|ZP_17427312.1| hypothetical protein IEC_05041 [Bacillus cereus BAG5O-1]
gi|423467660|ref|ZP_17444428.1| hypothetical protein IEK_04847 [Bacillus cereus BAG6O-1]
gi|423537062|ref|ZP_17513480.1| hypothetical protein IGI_04894 [Bacillus cereus HuB2-9]
gi|423542787|ref|ZP_17519176.1| hypothetical protein IGK_04877 [Bacillus cereus HuB4-10]
gi|423543903|ref|ZP_17520261.1| hypothetical protein IGO_00338 [Bacillus cereus HuB5-5]
gi|423626370|ref|ZP_17602147.1| hypothetical protein IK3_04967 [Bacillus cereus VD148]
gi|401124819|gb|EJQ32580.1| hypothetical protein IEC_05041 [Bacillus cereus BAG5O-1]
gi|401167845|gb|EJQ75119.1| hypothetical protein IGK_04877 [Bacillus cereus HuB4-10]
gi|401185607|gb|EJQ92699.1| hypothetical protein IGO_00338 [Bacillus cereus HuB5-5]
gi|401252549|gb|EJR58807.1| hypothetical protein IK3_04967 [Bacillus cereus VD148]
gi|401629454|gb|EJS47271.1| hypothetical protein IC9_04897 [Bacillus cereus BAG1O-2]
gi|402410529|gb|EJV42930.1| hypothetical protein IEA_04936 [Bacillus cereus BAG4X2-1]
gi|402413275|gb|EJV45621.1| hypothetical protein IEK_04847 [Bacillus cereus BAG6O-1]
gi|402460246|gb|EJV91969.1| hypothetical protein IGI_04894 [Bacillus cereus HuB2-9]
Length = 287
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 102/186 (54%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 102 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 161
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ LA + G L ++I ++ + L + GIG+
Sbjct: 162 IVANISIEELREQKFSQRKAEYIVGLAERIARGTLDLASIETGTEEEVSAQLLPIRGIGA 221
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++ + ++ PY S A+ Y
Sbjct: 222 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQLDDKPDDAFLENVKQECEPYCSYAALY 281
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 282 LWKSIE 287
>gi|42779621|ref|NP_976868.1| HhH-GPD superfamily base excision DNA repair protein [Bacillus
cereus ATCC 10987]
gi|4584142|emb|CAB40601.1| DNA alkylation repair enzyme [Bacillus cereus ATCC 10987]
gi|42735537|gb|AAS39476.1| HhH-GPD superfamily base excision DNA repair protein [Bacillus
cereus ATCC 10987]
Length = 287
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 102/186 (54%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 102 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 161
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ LA+ G L + I N ++ + L + GIG+
Sbjct: 162 IVANISIEELREQKFSQRKAEYMVGLAKCIIGGKLDLTRIENETEEGVAAQLLPIRGIGA 221
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++ + ++ PY S A+ Y
Sbjct: 222 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQLDDKPDDAFLENVKQECEPYCSYAALY 281
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 282 LWKSIE 287
>gi|75760088|ref|ZP_00740151.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228899169|ref|ZP_04063439.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis IBL
4222]
gi|228963567|ref|ZP_04124720.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
sotto str. T04001]
gi|74492438|gb|EAO55591.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228796085|gb|EEM43540.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228860438|gb|EEN04828.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis IBL
4222]
Length = 291
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 104/186 (55%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 106 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 165
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L R +G L+ ++I ++ + L + GIG+
Sbjct: 166 IVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIETGTEEEVSAQLLPIRGIGA 225
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F + R ++ P D+G+++ VQ ++ L++ P + ++++ ++ PY S A+ Y
Sbjct: 226 WTVQNFLMFGIGRKNMFPKADIGIQRAVQGIFQLDDKPDDAFLEKVKQECEPYCSYAALY 285
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 286 LWKSIE 291
>gi|423602054|ref|ZP_17578054.1| hypothetical protein III_04856 [Bacillus cereus VD078]
gi|401227918|gb|EJR34446.1| hypothetical protein III_04856 [Bacillus cereus VD078]
Length = 287
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 102/186 (54%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 102 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTDQFVKRYGKEKNGVFFFPTPE 161
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ LA+ G L + I N ++ + L + GIG+
Sbjct: 162 RVANISIEELREQKFSQRKAEYIVGLAKHIVGGKLDLARIQNETEEEVSAQLLPIRGIGA 221
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L+ P + ++++ ++ PY S A+ Y
Sbjct: 222 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQLDNKPDDAFLEKVKQECEPYCSYAALY 281
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 282 LWKSIE 287
>gi|228989611|ref|ZP_04149595.1| DNA-3-methyladenine glycosylase II [Bacillus pseudomycoides DSM
12442]
gi|228770148|gb|EEM18728.1| DNA-3-methyladenine glycosylase II [Bacillus pseudomycoides DSM
12442]
Length = 291
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 114/222 (51%), Gaps = 20/222 (9%)
Query: 123 SSEGEVEAAIRHLRNADRQLASLIDIHPP-------PTFDSF-HTP-------FLALTRS 167
S GE E ++ + + + S DI P F+++ +TP F L R
Sbjct: 70 SQTGEQEKVMKRIYSIFQWNESFQDIQTHFRNTSLRPLFETYAYTPLVLEFDYFACLLRC 129
Query: 168 ILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSGRKASYLH 222
I++QQ+ K TS+ +F+ G E V PE V ++ ++LR S RKA Y+
Sbjct: 130 IIHQQVHLKFATSLTEQFVKRYGTEKNGVFFFPTPERVANISIEELRNQKFSQRKAEYMV 189
Query: 223 DLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGV 282
LA+ G L+ + ++ + L V GIG+W+V F++F L R ++ P D+G+
Sbjct: 190 GLAKHIVEGKLNLVELEKQTEEVVAAQLLPVRGIGAWTVQNFLLFGLGRKNMFPKADIGI 249
Query: 283 RKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
++ +Q ++ LE+ P + ++++ ++ PY S A+ YLW+ +E
Sbjct: 250 QRALQGIFQLEDKPDDAFLEKMKQECEPYCSYAALYLWKSIE 291
>gi|218895543|ref|YP_002443954.1| endonuclease III domain protein [Bacillus cereus G9842]
gi|402562486|ref|YP_006605210.1| endonuclease III domain-containing protein [Bacillus thuringiensis
HD-771]
gi|423363084|ref|ZP_17340583.1| hypothetical protein IC1_05060 [Bacillus cereus VD022]
gi|423565241|ref|ZP_17541517.1| hypothetical protein II5_04645 [Bacillus cereus MSX-A1]
gi|434373536|ref|YP_006608180.1| endonuclease III domain protein [Bacillus thuringiensis HD-789]
gi|218542357|gb|ACK94751.1| endonuclease III domain protein [Bacillus cereus G9842]
gi|401076518|gb|EJP84872.1| hypothetical protein IC1_05060 [Bacillus cereus VD022]
gi|401194458|gb|EJR01438.1| hypothetical protein II5_04645 [Bacillus cereus MSX-A1]
gi|401791138|gb|AFQ17177.1| endonuclease III domain protein [Bacillus thuringiensis HD-771]
gi|401872093|gb|AFQ24260.1| endonuclease III domain protein [Bacillus thuringiensis HD-789]
Length = 287
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 104/186 (55%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 102 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 161
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L R +G L+ ++I ++ + L + GIG+
Sbjct: 162 IVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIETGTEEEVSAQLLPIRGIGA 221
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F + R ++ P D+G+++ VQ ++ L++ P + ++++ ++ PY S A+ Y
Sbjct: 222 WTVQNFLMFGIGRKNMFPKADIGIQRAVQGIFQLDDKPDDAFLEKVKQECEPYCSYAALY 281
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 282 LWKSIE 287
>gi|355671209|ref|ZP_09057781.1| hypothetical protein HMPREF9469_00818 [Clostridium citroniae
WAL-17108]
gi|354815761|gb|EHF00352.1| hypothetical protein HMPREF9469_00818 [Clostridium citroniae
WAL-17108]
Length = 212
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 109/210 (51%), Gaps = 18/210 (8%)
Query: 134 HLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEA 193
+L+ D+ L +ID + F A+ SI+ QQ++ KA +I+ + + + GE
Sbjct: 12 YLKKKDKILGQIIDQIGHIEREVRPDLFSAVVYSIIGQQISTKAHNTIWLK-MQMELGE- 69
Query: 194 GVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMV 253
+ E++LA +L+Q G + K Y+ D ARK ++G ++ + + + D+ L L+ +
Sbjct: 70 -INTESILAAGRDRLQQFGTTYHKVDYILDFARKVKSGAVNLNHLSQLPDEELIAELSQL 128
Query: 254 NGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRS 313
GIG W+ M ++F L RPDV DL + +G+++ Y +E+ R + + +++ PY S
Sbjct: 129 KGIGVWTSEMILLFCLQRPDVFSYGDLAILRGIRMAYHHKEISR-ERFQKYRQRFSPYCS 187
Query: 314 VASWYLWRFVEAKGAPSSAAAVAAGAALPQ 343
VAS Y W AG A+P+
Sbjct: 188 VASLYFW--------------AVAGGAIPE 203
>gi|404416250|ref|ZP_10998073.1| DNA-3-methyladenine glycosidase [Staphylococcus arlettae CVD059]
gi|403491330|gb|EJY96852.1| DNA-3-methyladenine glycosidase [Staphylococcus arlettae CVD059]
Length = 216
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 98/193 (50%), Gaps = 2/193 (1%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
I+ L D QLA LI P TF +P ++ RSI+ QQ+ K +I+ R
Sbjct: 13 CIKQLITQDAQLAKLIKHIGPITFPKRPSPLKSIIRSIIGQQITVKLAQTIFQRLTETVN 72
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
+ + + L+ T +L+++G+S K + L Q G + + + + ++ L
Sbjct: 73 DDWSIASLSKLSAT--KLQELGLSRAKTQCIIALLEHVQAGNIDFQKLPYLSNTAVTRNL 130
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRP 310
T V GIG W+ +++IF+LHR D+LP+ D+G+++ Q LY + + Q ++W
Sbjct: 131 TQVKGIGQWTAEIYLIFTLHRIDILPVKDVGLQRAAQWLYQPTNTTKAETLKQCNQRWTG 190
Query: 311 YRSVASWYLWRFV 323
+++ + YLW +
Sbjct: 191 CQTIGALYLWEAI 203
>gi|402553976|ref|YP_006595247.1| HhH-GPD superfamily base excision DNA repair protein [Bacillus
cereus FRI-35]
gi|401795186|gb|AFQ09045.1| HhH-GPD superfamily base excision DNA repair protein [Bacillus
cereus FRI-35]
Length = 287
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 102/186 (54%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 102 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 161
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ LA+ G L + I N ++ + L + GIG+
Sbjct: 162 IVANISIEELREQKFSQRKAEYMVGLAKCIIGGKLDLARIENETEEGVAAQLLPIRGIGA 221
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++ + ++ PY S A+ Y
Sbjct: 222 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQLDDKPDDAFLENVKQECEPYCSYAALY 281
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 282 LWKSIE 287
>gi|423515263|ref|ZP_17491744.1| hypothetical protein IG7_00333 [Bacillus cereus HuA2-4]
gi|401167389|gb|EJQ74673.1| hypothetical protein IG7_00333 [Bacillus cereus HuA2-4]
Length = 287
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 102/186 (54%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 102 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTDQFVKRYGTEKNGVFFFPTPE 161
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ LA+ G L + I N ++ + L + GIG+
Sbjct: 162 RVANISIEELREQKFSQRKAEYIVGLAKHIVGGKLDLARIQNETEEEVSAQLLPIRGIGA 221
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L+ P + ++++ ++ PY S A+ Y
Sbjct: 222 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQLDNKPDDAFLEKVKQECEPYCSYAALY 281
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 282 LWKSIE 287
>gi|229074351|ref|ZP_04207389.1| DNA-3-methyladenine glycosylase II [Bacillus cereus Rock4-18]
gi|229095126|ref|ZP_04226121.1| DNA-3-methyladenine glycosylase II [Bacillus cereus Rock3-29]
gi|229114080|ref|ZP_04243505.1| DNA-3-methyladenine glycosylase II [Bacillus cereus Rock1-3]
gi|228669350|gb|EEL24767.1| DNA-3-methyladenine glycosylase II [Bacillus cereus Rock1-3]
gi|228688311|gb|EEL42194.1| DNA-3-methyladenine glycosylase II [Bacillus cereus Rock3-29]
gi|228708793|gb|EEL60928.1| DNA-3-methyladenine glycosylase II [Bacillus cereus Rock4-18]
Length = 291
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 102/186 (54%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 106 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 165
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ LA + G L ++I ++ + L + GIG+
Sbjct: 166 IVANISIEELREQKFSQRKAEYIVGLAERIARGTLDLASIETGTEEEVSAQLLPIRGIGA 225
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++ + ++ PY S A+ Y
Sbjct: 226 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQLDDKPDDAFLENVKQECEPYCSYAALY 285
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 286 LWKSIE 291
>gi|229131422|ref|ZP_04260318.1| DNA-3-methyladenine glycosylase II [Bacillus cereus BDRD-ST196]
gi|228652006|gb|EEL07947.1| DNA-3-methyladenine glycosylase II [Bacillus cereus BDRD-ST196]
Length = 291
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 102/186 (54%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 106 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTDQFVKRYGTEKNGVFFFPTPE 165
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ LA+ G L + I N ++ + L + GIG+
Sbjct: 166 RVANISIEELREQKFSQRKAEYIVGLAKHIVGGKLDLARIQNETEEEVSAQLLPIRGIGA 225
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L+ P + ++++ ++ PY S A+ Y
Sbjct: 226 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQLDNKPDDAFLEKVKQECEPYCSYAALY 285
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 286 LWKSIE 291
>gi|423455959|ref|ZP_17432812.1| hypothetical protein IEE_04703 [Bacillus cereus BAG5X1-1]
gi|401133383|gb|EJQ41014.1| hypothetical protein IEE_04703 [Bacillus cereus BAG5X1-1]
Length = 287
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 102/186 (54%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEA-GVV----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E GV PE
Sbjct: 102 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTDQFVKRYGTEKDGVFFFPTPE 161
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ LA+ G L + I N ++ + L + GIG+
Sbjct: 162 RVANISIEELREQKFSQRKAEYIVGLAKHIAGGKLDLARIENETEEEVSAQLLPIRGIGA 221
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+R+ +Q ++ L+ P + ++++ + PY S A+ Y
Sbjct: 222 WTVQNFLMFGLGRKNMFPEADIGIRRALQGVFQLDNKPDDAFLEKVKQDCEPYCSYAALY 281
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 282 LWKSIE 287
>gi|163938415|ref|YP_001643299.1| HhH-GPD family protein [Bacillus weihenstephanensis KBAB4]
gi|423485712|ref|ZP_17462394.1| hypothetical protein IEU_00335 [Bacillus cereus BtB2-4]
gi|423491436|ref|ZP_17468080.1| hypothetical protein IEW_00334 [Bacillus cereus CER057]
gi|423501771|ref|ZP_17478388.1| hypothetical protein IEY_04998 [Bacillus cereus CER074]
gi|423596516|ref|ZP_17572543.1| hypothetical protein IIG_05380 [Bacillus cereus VD048]
gi|423664452|ref|ZP_17639617.1| hypothetical protein IKM_04842 [Bacillus cereus VDM022]
gi|163860612|gb|ABY41671.1| HhH-GPD family protein [Bacillus weihenstephanensis KBAB4]
gi|401152218|gb|EJQ59657.1| hypothetical protein IEY_04998 [Bacillus cereus CER074]
gi|401159780|gb|EJQ67160.1| hypothetical protein IEW_00334 [Bacillus cereus CER057]
gi|401219686|gb|EJR26338.1| hypothetical protein IIG_05380 [Bacillus cereus VD048]
gi|401293023|gb|EJR98672.1| hypothetical protein IKM_04842 [Bacillus cereus VDM022]
gi|402440976|gb|EJV72954.1| hypothetical protein IEU_00335 [Bacillus cereus BtB2-4]
Length = 287
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 102/186 (54%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 102 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTDQFVKRYGTEKNGVFFFPTPE 161
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ LA+ G L + I N ++ + L + GIG+
Sbjct: 162 RVANISIEELREQKFSQRKAEYIVGLAKHIVGGKLDLARIQNETEEEVSAQLLPIRGIGA 221
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L+ P + ++++ ++ PY S A+ Y
Sbjct: 222 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQLDNKPDDAFLEKVKQECEPYCSYAALY 281
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 282 LWKSIE 287
>gi|229101228|ref|ZP_04231992.1| DNA-3-methyladenine glycosylase II [Bacillus cereus Rock3-28]
gi|228682196|gb|EEL36309.1| DNA-3-methyladenine glycosylase II [Bacillus cereus Rock3-28]
Length = 291
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 102/186 (54%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+ + +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 106 PLFEMYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 165
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ LA + +G L ++I ++ + L + GIG+
Sbjct: 166 IVANISIEELREQKFSQRKAEYIVGLAERIAHGTLDLASIETKTEEEVSAQLLPIRGIGA 225
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++ + ++ PY S A+ Y
Sbjct: 226 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQLDDKPDDAFLENVKQECEPYCSYAALY 285
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 286 LWKSIE 291
>gi|15828566|ref|NP_325926.1| methylated-DNA--protein-cysteine methyltransferase [Mycoplasma
pulmonis UAB CTIP]
gi|14089508|emb|CAC13268.1| METHYLATED-DNA--PROTEIN-CYSTEINE METHYLTRANSFERASE
(6-O-METHYLGUANINE-DNA METHYLTRANSFERASE)
(O-6-METHYLGUANINE-DNA-ALKYLTRANSFERASE) [Mycoplasma
pulmonis]
Length = 378
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 104/206 (50%), Gaps = 20/206 (9%)
Query: 129 EAAIRHLRNADRQLASLID--------IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTS 180
E + +L+ D++LA I+ I P F+A+ SI+ QQ++ KA +
Sbjct: 7 ENEVNYLKRKDKKLAKAIEKIGFIKREIKP--------NLFVAIVHSIIGQQISTKAHKT 58
Query: 181 IYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVN 240
++ RF + +T+ + IG++ RK +Y+ D A+K N A+ +
Sbjct: 59 LWKRFEEKV---KNIDAKTLASFDLFDFDGIGIANRKLTYILDFAKKVYNKEFDIDALYS 115
Query: 241 MDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQ 300
M D L+ + GIG W+ M MIFS+ R ++L DL + + +++LY +++ + +
Sbjct: 116 MSDNEAIKSLSSLKGIGQWTAEMAMIFSMQRKNILSYKDLAIIRAIKMLYGYKDVDKIT- 174
Query: 301 MDQLCEKWRPYRSVASWYLWRFVEAK 326
++L +++ P+ S+AS YLW K
Sbjct: 175 FEKLEKRYSPFASIASLYLWEIASGK 200
>gi|229009909|ref|ZP_04167128.1| DNA-3-methyladenine glycosylase II [Bacillus mycoides DSM 2048]
gi|229165424|ref|ZP_04293208.1| DNA-3-methyladenine glycosylase II [Bacillus cereus AH621]
gi|228618022|gb|EEK75063.1| DNA-3-methyladenine glycosylase II [Bacillus cereus AH621]
gi|228751340|gb|EEM01147.1| DNA-3-methyladenine glycosylase II [Bacillus mycoides DSM 2048]
Length = 291
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 102/186 (54%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 106 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTDQFVKRYGTEKNGVFFFPTPE 165
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ LA+ G L + I N ++ + L + GIG+
Sbjct: 166 RVANISIEELREQKFSQRKAEYIVGLAKHIVGGKLDLARIQNETEEEVSAQLLPIRGIGA 225
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L+ P + ++++ ++ PY S A+ Y
Sbjct: 226 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQLDNKPDDAFLEKVKQECEPYCSYAALY 285
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 286 LWKSIE 291
>gi|258515728|ref|YP_003191950.1| HhH-GPD family protein [Desulfotomaculum acetoxidans DSM 771]
gi|257779433|gb|ACV63327.1| HhH-GPD family protein [Desulfotomaculum acetoxidans DSM 771]
Length = 201
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 91/160 (56%), Gaps = 4/160 (2%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASY 220
F AL SI+ QQ++ KA +++ RF+ + + + T ++++Q G++ +KA Y
Sbjct: 40 FAALVHSIISQQISSKAAATVWNRFLERFDE---ITSQKIAYTTAEEIQQCGITMKKAIY 96
Query: 221 LHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDL 280
+ +A G + + + D+ + L+ +NGIG W+ M M FS+ RP+V+ DL
Sbjct: 97 IKSIADAVMQGEFNIDELSELPDEEVCKRLSALNGIGVWTAEMLMTFSMQRPNVMSWGDL 156
Query: 281 GVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLW 320
+R+G+ +LY +L + ++ ++ ++ PY ++AS YLW
Sbjct: 157 AIRRGIMMLYHHRKLDK-AKFEKYKRRYSPYCTIASLYLW 195
>gi|448639440|ref|ZP_21676766.1| DNA-3-methyladenine glycosylase [Haloarcula sinaiiensis ATCC 33800]
gi|448658503|ref|ZP_21682903.1| DNA-3-methyladenine glycosylase [Haloarcula californiae ATCC 33799]
gi|445761228|gb|EMA12477.1| DNA-3-methyladenine glycosylase [Haloarcula californiae ATCC 33799]
gi|445762719|gb|EMA13937.1| DNA-3-methyladenine glycosylase [Haloarcula sinaiiensis ATCC 33800]
Length = 203
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 92/185 (49%), Gaps = 8/185 (4%)
Query: 138 ADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTR-FIALCGGEAGVV 196
AD + L++ H T D F L SIL QQ++ + + R F A+ V
Sbjct: 11 ADPDIGPLVETHGELTLDPASDLFERLVVSILRQQVSMASAAATRERLFDAVT-----VT 65
Query: 197 PETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGI 256
P + LR G+S +K Y++++A + S + D+ + LT + G+
Sbjct: 66 PAGIKDADNDLLRDAGLSRQKTRYVNEVADAFLEHGYSLETFEDAADEEIHEELTAITGV 125
Query: 257 GSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVAS 316
G W+ +M ++F+ R DV P+ DLG+RKG + + + ++M + E+W PYRS AS
Sbjct: 126 GDWTANMQLLFAFGRKDVFPVGDLGIRKGFEAVVG--DGYSRAEMREYAERWSPYRSYAS 183
Query: 317 WYLWR 321
YLWR
Sbjct: 184 LYLWR 188
>gi|210630624|ref|ZP_03296527.1| hypothetical protein COLSTE_00412 [Collinsella stercoris DSM 13279]
gi|210160399|gb|EEA91370.1| base excision DNA repair protein, HhH-GPD family [Collinsella
stercoris DSM 13279]
Length = 189
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 7/165 (4%)
Query: 158 HTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRK 217
+ F +L SI+ Q L+ KAG +I +R LC G+ PE + + + ++ G+S RK
Sbjct: 13 ESAFHSLAHSIIEQMLSMKAGRAIESRLRELCDGD--YTPECIAGIPAENIKSCGMSFRK 70
Query: 218 ASYLHDLARKYQNGILSD-SAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLP 276
L LA + + +D ++ + D+ ++ L + GIG W+ MF++F L RPD+LP
Sbjct: 71 VQSLKTLA---EYALANDLESLAELPDEDVYKTLVQLPGIGKWTCDMFLLFYLGRPDILP 127
Query: 277 INDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
+ D +R+ + LY + + Q +C WRPY S A YL+R
Sbjct: 128 VEDGALRQAFEWLYGAPIVSKEVQA-VVCSLWRPYSSTAVRYLYR 171
>gi|374315392|ref|YP_005061820.1| 3-methyladenine DNA glycosylase [Sphaerochaeta pleomorpha str.
Grapes]
gi|359351036|gb|AEV28810.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Sphaerochaeta pleomorpha str. Grapes]
Length = 209
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 96/193 (49%), Gaps = 3/193 (1%)
Query: 132 IRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGG 191
I++L N D LA I+ ++ + + ++ Q L+ K I RF LC
Sbjct: 11 IQYLCNKDPILAKGIERVGKLSYTTSEEGLTFVVGLVISQMLSSKVAEVIEKRFQLLCN- 69
Query: 192 EAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLT 251
+ ET+ +L Q+R IG+S RKA + D+A Q + DK + + LT
Sbjct: 70 -YNLTTETISSLEIAQMRSIGLSNRKAQTIKDVALYCQEHPSFFKELATCLDKEVISRLT 128
Query: 252 MVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPY 311
+ GIG W+ M++IF+L R DVLP D + + LY E+L S + Q C W PY
Sbjct: 129 SLKGIGPWTAKMYLIFALDRMDVLPYEDGAFLQAYRYLYKTEDLS-ISSITQRCAVWHPY 187
Query: 312 RSVASWYLWRFVE 324
SVAS YL+R ++
Sbjct: 188 ASVASRYLYRMLD 200
>gi|228913173|ref|ZP_04076812.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228846578|gb|EEM91591.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 291
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 103/186 (55%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 106 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 165
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L R +G L+ ++I + + L + GIG+
Sbjct: 166 IVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASIETRVEDEVSAQLLPIRGIGT 225
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++++ ++ PY S A+ Y
Sbjct: 226 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQLDDKPDDAFLEKVKQECEPYCSYAALY 285
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 286 LWKSIE 291
>gi|52144820|ref|YP_082008.1| DNA-3-methyladenine glycosylase II [Bacillus cereus E33L]
gi|51978289|gb|AAU19839.1| DNA-3-methyladenine glycosylase II (3-methyladenine-DNA
glycosidase) [Bacillus cereus E33L]
Length = 287
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 103/186 (55%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 102 PLFETYAYTPIILEFDYFSCLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 161
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L R +G L+ + I ++ + L + GIG+
Sbjct: 162 IVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLTNIETRAEEEVSAQLLPIRGIGT 221
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++++ ++ PY S A+ Y
Sbjct: 222 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQLDDRPDEAFLEKVKQECEPYCSYAALY 281
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 282 LWKSIE 287
>gi|238758090|ref|ZP_04619270.1| Methylated-DNA--protein-cysteine methyltransferase [Yersinia
aldovae ATCC 35236]
gi|238703628|gb|EEP96165.1| Methylated-DNA--protein-cysteine methyltransferase [Yersinia
aldovae ATCC 35236]
Length = 201
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 107/199 (53%), Gaps = 14/199 (7%)
Query: 126 GEVEAAIRHLRNADRQLASLID----IHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSI 181
GE E I HL+ D+++A+ I+ I P + D F AL R+I+ QQ++ KA ++
Sbjct: 6 GETE--INHLKQRDKKMAAAIERLGMITRPLSRDLFS----ALIRNIIDQQISVKAALTV 59
Query: 182 YTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNM 241
R AL G V P TV A T + +++ G++ RKA Y+ A NG L S+I +
Sbjct: 60 NARLRALLGT---VTPMTVAATTVEAIQRCGMTMRKAGYIKGAADAALNGSLDLSSISLL 116
Query: 242 DDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQM 301
D + + L+ ++G+G W+ M +I SL RPDV+ DL +R+G+ LY + LPR
Sbjct: 117 SDDEVISQLSRLDGVGIWTAEMLLISSLARPDVVSWGDLAIRRGMMNLYHHKTLPRERFE 176
Query: 302 DQLCEKWRPYRSVASWYLW 320
PY + AS YLW
Sbjct: 177 RYRRRY-APYGTTASLYLW 194
>gi|392570358|gb|EIW63531.1| DNA glycosylase [Trametes versicolor FP-101664 SS1]
Length = 457
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 89/176 (50%), Gaps = 19/176 (10%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFH--TPFLALTRSILYQQLAFKAGTSIYTRFI 186
E A RHL D + + F+ PF L SIL QQ+++KA SI +F+
Sbjct: 102 EEARRHLVRVDPRFEDVFRRVKCRPFEHLERVDPFRTLAHSILGQQISWKAAASITHKFV 161
Query: 187 AL---------CGGEAGVVPETVLALTPQ--QLRQIGVSGRKASYLHDLARKYQNGILSD 235
L ++ P +T LR G+SGRKA Y+ DLA ++ +G LS
Sbjct: 162 RLFDPSLPESIADSKSNFFPSAHQVITKDIATLRSAGLSGRKAEYVLDLAGRFADGRLST 221
Query: 236 SAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN-----DLGVRKGV 286
++ DD+ L+ ML V GIG + MF +FSL RPD+LP+ DLGV+KG+
Sbjct: 222 RKLLLADDEELYKMLIEVRGIGR-VIDMFAMFSLRRPDILPVGKSSRWDLGVQKGM 276
>gi|258568236|ref|XP_002584862.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237906308|gb|EEP80709.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 425
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 95/215 (44%), Gaps = 48/215 (22%)
Query: 120 RPLSSEGEV-EAAIRHLRNADRQLASLIDIHPPPTFDSFH-----TPFLALTRSILYQQL 173
RP ++ G + E + HL +L+++I+ +P P F + PF AL+ I+ QQ+
Sbjct: 162 RPTATTGNILEHGLSHLLRVGPRLSAVIEKYPSPPFSASDLAEEVDPFQALSSGIIGQQV 221
Query: 174 AFKAGTSIYTRFIALC--GGEAGV------------------------------------ 195
+ A SI +F+AL G AG
Sbjct: 222 SGAAAKSIKKKFVALFKKGSAAGDSIGSTGESEKNDYDYGTNTQKSINETGDVNDGDNVS 281
Query: 196 ----VPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLT 251
PE V+ LR G+S RKA Y+H LA K+ +G LS ++ D + L
Sbjct: 282 MGFPTPEEVVKCDLATLRTAGLSQRKAEYIHGLAEKFVSGELSARMLLTASDDEVLEKLI 341
Query: 252 MVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV 286
V G+G WSV MF +F L R DV DLGV++G+
Sbjct: 342 AVRGLGKWSVEMFSVFGLKRLDVFSTGDLGVQRGM 376
>gi|189196784|ref|XP_001934730.1| DNA-3-methyladenine glycosylase [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187980609|gb|EDU47235.1| DNA-3-methyladenine glycosylase [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 439
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 86/170 (50%), Gaps = 21/170 (12%)
Query: 172 QLAFKAGTSIYTRFIAL--CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQ 229
Q++ +A +SI +F AL A P VL L LR G+S RKA Y+ LA K+
Sbjct: 265 QVSGQAASSIRAKFTALFPTTHPAFPTPTQVLQLPIPTLRTAGLSQRKAEYITGLAEKFC 324
Query: 230 NGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLL 289
+G L+ +V+ D+ L L V G+G WSV MF F L R DV DLGV++G+ +
Sbjct: 325 SGELTAQMLVSASDEELIEKLVAVRGLGRWSVEMFACFGLKRMDVFSTGDLGVQRGMA-V 383
Query: 290 YSLEELPRPSQMDQLCEKWR---------------PYRSVASWYLWRFVE 324
Y+ ++ +++ KW+ PYRS+ WY+WR +
Sbjct: 384 YAGRDV---NKLKSKGGKWKYMTEREMLDTAANFSPYRSLFMWYMWRIAD 430
>gi|423619962|ref|ZP_17595793.1| hypothetical protein IIO_05285 [Bacillus cereus VD115]
gi|401250455|gb|EJR56755.1| hypothetical protein IIO_05285 [Bacillus cereus VD115]
Length = 287
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 101/186 (54%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+ + +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 102 PLFEMYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 161
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ LA + G L ++I ++ + L + GIG+
Sbjct: 162 IVANISIEELREQKFSQRKAEYIVGLAERIARGTLDLASIETKTEEEVSAQLLPIRGIGA 221
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++ + ++ PY S A+ Y
Sbjct: 222 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQLDDKPDDAFLENVKQECEPYCSYAALY 281
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 282 LWKSIE 287
>gi|448677641|ref|ZP_21688831.1| DNA-3-methyladenine glycosylase [Haloarcula argentinensis DSM
12282]
gi|445773316|gb|EMA24349.1| DNA-3-methyladenine glycosylase [Haloarcula argentinensis DSM
12282]
Length = 203
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 92/178 (51%), Gaps = 8/178 (4%)
Query: 145 LIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTR-FIALCGGEAGVVPETVLAL 203
L++ H T D F L SIL QQ++ + + R F A+ V P +
Sbjct: 18 LVETHGELTLDPASDLFERLVVSILRQQVSMASAAATRDRLFDAVT-----VTPAGIRDA 72
Query: 204 TPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHM 263
+ LR G+S +K Y++++A + S + + D+ + LT + G+G W+ +M
Sbjct: 73 DNEVLRDAGLSRQKTRYVNEVADAFLEHGYSLATFEDAADEEIHEKLTAITGVGDWTANM 132
Query: 264 FMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
++F+ R DV P+ DLG+RKG + + + + ++M + E+W PYRS AS YLWR
Sbjct: 133 QLLFAFGREDVFPVGDLGIRKGFEAV--VGDGYSRAEMCEYAERWSPYRSYASLYLWR 188
>gi|386858113|ref|YP_006262290.1| Putative 3-methyladenine DNA glycosylase [Deinococcus gobiensis
I-0]
gi|380001642|gb|AFD26832.1| Putative 3-methyladenine DNA glycosylase [Deinococcus gobiensis
I-0]
Length = 186
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 85/169 (50%), Gaps = 9/169 (5%)
Query: 152 PTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQI 211
P ++ PF L RS+ QQL+ KA SI+ R +A G V +TV LR +
Sbjct: 13 PVLEATADPFGTLVRSVAGQQLSVKAAASIHGRLVAALGE---VTAQTVRRTPGDDLRAL 69
Query: 212 GVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHR 271
G+S K +H LA G + + + D+ + L+ + GIG W+ MF++F L R
Sbjct: 70 GLSWAKVRTVHALADAALGGRIDFAHLSGQGDEEIVAELSALPGIGRWTAEMFLMFGLAR 129
Query: 272 PDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLW 320
PDV DL +R+G+ LY P Q D + W PYR++ + YLW
Sbjct: 130 PDVFSFGDLALRQGLARLY-----PGAPQAD-VPLPWAPYRTLGARYLW 172
>gi|94984215|ref|YP_603579.1| HhH-GPD [Deinococcus geothermalis DSM 11300]
gi|94554496|gb|ABF44410.1| endonuclease III, DNA-3-methyladenine glycosidase II [Deinococcus
geothermalis DSM 11300]
Length = 216
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 86/161 (53%), Gaps = 5/161 (3%)
Query: 160 PFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKAS 219
PF L RS++ QQL+ +A SI R GG V PE +L P +LR +G+S K
Sbjct: 46 PFGTLVRSVVGQQLSTQAAASIAARLEDALGG---VEPEALLRTPPDKLRALGLSWAKVR 102
Query: 220 YLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIND 279
+ LA +G + + + ++ D ++ LT + GIG W+V MF++F L RPDV D
Sbjct: 103 TVRALADAALSGQVDFAHLSSLPDAAVIDALTPLPGIGRWTVEMFLMFGLARPDVFSFGD 162
Query: 280 LGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLW 320
L +R+G+ LY + S + W PYR++A+ LW
Sbjct: 163 LVLRQGLSRLY--PHVAPGSAQAAVVAAWSPYRTLAARVLW 201
>gi|229056262|ref|ZP_04195683.1| DNA-3-methyladenine glycosylase II [Bacillus cereus AH603]
gi|228721067|gb|EEL72605.1| DNA-3-methyladenine glycosylase II [Bacillus cereus AH603]
Length = 291
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 102/186 (54%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 106 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTDQFVKRYGTEKNGVFFFPTPE 165
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ LA+ G L + I N ++ + L + GIG+
Sbjct: 166 RVANISIEELREQKFSQRKAEYIVGLAKHIVGGKLDLARIENETEEEVSAQLLPIRGIGA 225
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L+ P + ++++ ++ PY S A+ Y
Sbjct: 226 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQLDYKPDDAFLEKVKQECEPYCSYAALY 285
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 286 LWKSIE 291
>gi|228995799|ref|ZP_04155459.1| DNA-3-methyladenine glycosylase II [Bacillus mycoides Rock3-17]
gi|228763960|gb|EEM12847.1| DNA-3-methyladenine glycosylase II [Bacillus mycoides Rock3-17]
Length = 291
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 113/222 (50%), Gaps = 20/222 (9%)
Query: 123 SSEGEVEAAIRHLRNADRQLASLIDIHPP-------PTFDSF-HTP-------FLALTRS 167
S GE E ++ + + + S DI P F+++ +TP F L R
Sbjct: 70 SQTGEQEKVMKRIYSIFQWNESFQDIQTHFRNTSLRPLFETYAYTPLVLEFDYFACLLRC 129
Query: 168 ILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSGRKASYLH 222
I++QQ+ K TS+ +F+ G E V PE V ++ ++LR S RKA Y+
Sbjct: 130 IIHQQVHLKFATSLTEQFVKRYGTEKNGVFFFPTPERVANISIEELRNQKFSQRKAEYMV 189
Query: 223 DLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGV 282
LA+ G L+ + ++ + L V GIG+W+V F++F L R ++ P D+G+
Sbjct: 190 GLAKHIVEGKLNLVELEKQTEEVVAAQLLPVRGIGAWTVQNFLLFGLGRKNMFPKADIGI 249
Query: 283 RKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
++ +Q ++ LE P + ++++ ++ PY S A+ YLW+ +E
Sbjct: 250 QRALQGIFQLENKPDDAFLEKMKQECEPYCSYAALYLWKSIE 291
>gi|49476817|ref|YP_034753.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|196034736|ref|ZP_03102144.1| endonuclease III domain protein [Bacillus cereus W]
gi|218901629|ref|YP_002449463.1| endonuclease III domain protein [Bacillus cereus AH820]
gi|300119049|ref|ZP_07056760.1| endonuclease III domain protein [Bacillus cereus SJ1]
gi|301052141|ref|YP_003790352.1| DNA-3-methyladenine glycosylase II [Bacillus cereus biovar
anthracis str. CI]
gi|423553657|ref|ZP_17529984.1| hypothetical protein IGW_04288 [Bacillus cereus ISP3191]
gi|49328373|gb|AAT59019.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|195992779|gb|EDX56739.1| endonuclease III domain protein [Bacillus cereus W]
gi|218538815|gb|ACK91213.1| endonuclease III domain protein [Bacillus cereus AH820]
gi|298723665|gb|EFI64396.1| endonuclease III domain protein [Bacillus cereus SJ1]
gi|300374310|gb|ADK03214.1| DNA-3-methyladenine glycosylase II [Bacillus cereus biovar
anthracis str. CI]
gi|401183430|gb|EJQ90546.1| hypothetical protein IGW_04288 [Bacillus cereus ISP3191]
Length = 287
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 104/186 (55%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 102 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 161
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L + +G L+ ++I ++ + L + GIG+
Sbjct: 162 IVANISIEELREQKFSQRKAEYIVGLGQSIASGTLNLASIETRAEEEVSARLLPIRGIGT 221
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++++ ++ PY S A+ Y
Sbjct: 222 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQLDDKPDDAFLEKVKQECEPYCSYAALY 281
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 282 LWKSIE 287
>gi|328954683|ref|YP_004372016.1| DNA-3-methyladenine glycosylase II [Coriobacterium glomerans PW2]
gi|328455007|gb|AEB06201.1| DNA-3-methyladenine glycosylase II [Coriobacterium glomerans PW2]
Length = 305
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 85/154 (55%), Gaps = 6/154 (3%)
Query: 168 ILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTP-QQLRQIGVSGRKASYLHDLAR 226
I+ QQ++ A +I+ R G + V+A TP ++L+ G++ RKA Y+ DLAR
Sbjct: 128 IIGQQISTAAQQTIWRRM----HDALGEIDADVIAATPVEELQSFGMTFRKAGYIRDLAR 183
Query: 227 KYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV 286
+ +G I ++DD L + G+G W+ M ++F L RPDVL DLG+++G+
Sbjct: 184 QLVDGSFDLEGIRSLDDADAVERLVAIKGVGVWTAEMILLFCLERPDVLSYGDLGIQRGL 243
Query: 287 QLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLW 320
++LY + P+ + ++ P SVAS YLW
Sbjct: 244 RMLYHHRAIS-PALFKRYRRRFSPCGSVASLYLW 276
>gi|228925679|ref|ZP_04088766.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228931915|ref|ZP_04094809.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228944239|ref|ZP_04106615.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|229089547|ref|ZP_04220814.1| DNA-3-methyladenine glycosylase II [Bacillus cereus Rock3-42]
gi|229120087|ref|ZP_04249339.1| DNA-3-methyladenine glycosylase II [Bacillus cereus 95/8201]
gi|228663325|gb|EEL18913.1| DNA-3-methyladenine glycosylase II [Bacillus cereus 95/8201]
gi|228693763|gb|EEL47459.1| DNA-3-methyladenine glycosylase II [Bacillus cereus Rock3-42]
gi|228815390|gb|EEM61635.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228827700|gb|EEM73440.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228833954|gb|EEM79504.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 291
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 104/186 (55%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 106 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 165
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L + +G L+ ++I ++ + L + GIG+
Sbjct: 166 IVANISIEELREQKFSQRKAEYIVGLGQSIASGTLNLASIETRAEEEVSARLLPIRGIGT 225
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++++ ++ PY S A+ Y
Sbjct: 226 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQLDDKPDDAFLEKVKQECEPYCSYAALY 285
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 286 LWKSIE 291
>gi|338814128|ref|ZP_08626172.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Acetonema longum DSM 6540]
gi|337273897|gb|EGO62490.1| 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[Acetonema longum DSM 6540]
Length = 258
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 37/230 (16%)
Query: 120 RPLSSEGEVEAAIRHLRNADRQLASLID----IHPPPTFDSFHTPFLALTRSILYQQLAF 175
R + GE E +LR D++L +I+ I+ D F + + I+ QQ++
Sbjct: 41 RMYFAYGEKET--EYLRQKDKRLGEVIEKIGHIYRKTDTDLFSS----VIHHIIGQQIST 94
Query: 176 KAGTSIYTRFIALCGGEAGVVPETVLALTPQ-QLRQIGVSGRKASYLHDLARKYQNGILS 234
KA +I+ R G V +A+T + +L+ G++ RKA Y+ D ++K Q+G
Sbjct: 95 KAQATIWQRM----QNTFGTVTAGKIAITNENELQGFGMTFRKAEYIIDFSQKVQDGSFD 150
Query: 235 DSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEE 294
I ++ L+ + GIG+W+ M ++F L RPDV +DL +++G++++Y +
Sbjct: 151 LDGIRQKTNEEAIAALSALKGIGAWTAEMILLFCLERPDVFSFDDLAIQRGLRMVYHHRK 210
Query: 295 LPRPSQMDQLCEKWR----PYRSVASWYLWRFVEAKGAPSSAAAVAAGAA 340
+ R +L EK+R PY SVAS YLW AVA GA
Sbjct: 211 IDR-----KLFEKYRRRFSPYCSVASLYLW-------------AVAGGAV 242
>gi|149914715|ref|ZP_01903245.1| DNA-3-methyladenine glycosylase II, putative [Roseobacter sp.
AzwK-3b]
gi|149811508|gb|EDM71343.1| DNA-3-methyladenine glycosylase II, putative [Roseobacter sp.
AzwK-3b]
Length = 209
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 99/206 (48%), Gaps = 8/206 (3%)
Query: 117 IIARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFK 176
+I R + + +VE HLR A ++A D+ P F L +I+ QQ++
Sbjct: 1 MIGRIIETLDDVEEGATHLRAACPRMAHAHDLTAPLPLRRRQDGFEQLLNAIVSQQVSVA 60
Query: 177 AGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDS 236
A +I++R G P +L + LR G+S +K Y AR +
Sbjct: 61 AADAIWSRM----KGAKLTGPRKILWASDDDLRAAGLSRQKIRY----ARALAGARIDYR 112
Query: 237 AIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELP 296
A+ + + + LT V GIG W+ ++ +FSL R DV DL +++G +LLY L E P
Sbjct: 113 ALRDAPTEQVIETLTEVPGIGVWTAEIYAMFSLGRADVFAPGDLALQEGARLLYDLPERP 172
Query: 297 RPSQMDQLCEKWRPYRSVASWYLWRF 322
+ + E WRP+RSVA+ LW +
Sbjct: 173 NERALRAMSEAWRPWRSVAARILWAY 198
>gi|49183441|ref|YP_026693.1| DNA-3-methyladenine glycosylase II, C-terminus, partial [Bacillus
anthracis str. Sterne]
gi|227813099|ref|YP_002813108.1| endonuclease III domain protein [Bacillus anthracis str. CDC 684]
gi|254686815|ref|ZP_05150673.1| endonuclease III domain protein [Bacillus anthracis str.
CNEVA-9066]
gi|254738959|ref|ZP_05196661.1| endonuclease III domain protein [Bacillus anthracis str. Western
North America USA6153]
gi|254744547|ref|ZP_05202226.1| endonuclease III domain protein [Bacillus anthracis str. Kruger B]
gi|254756195|ref|ZP_05208224.1| endonuclease III domain protein [Bacillus anthracis str. Vollum]
gi|254762014|ref|ZP_05213863.1| endonuclease III domain protein [Bacillus anthracis str. Australia
94]
gi|386734279|ref|YP_006207460.1| DNA-3-methyladenine glycosylase II [Bacillus anthracis str. H9401]
gi|421507827|ref|ZP_15954745.1| DNA-3-methyladenine glycosylase II [Bacillus anthracis str. UR-1]
gi|421638999|ref|ZP_16079593.1| DNA-3-methyladenine glycosylase II [Bacillus anthracis str. BF1]
gi|49177368|gb|AAT52744.1| DNA-3-methyladenine glycosylase II, C-terminus [Bacillus anthracis
str. Sterne]
gi|227002664|gb|ACP12407.1| endonuclease III domain protein [Bacillus anthracis str. CDC 684]
gi|384384131|gb|AFH81792.1| DNA-3-methyladenine glycosylase II [Bacillus anthracis str. H9401]
gi|401822262|gb|EJT21414.1| DNA-3-methyladenine glycosylase II [Bacillus anthracis str. UR-1]
gi|403393914|gb|EJY91156.1| DNA-3-methyladenine glycosylase II [Bacillus anthracis str. BF1]
Length = 213
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 104/186 (55%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 28 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 87
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L + +G L+ ++I ++ + L + GIG+
Sbjct: 88 IVANISIEELREQKFSQRKAEYIVGLGQSIASGTLNLASIETRAEEEVSARLLPIRGIGT 147
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++++ ++ PY S A+ Y
Sbjct: 148 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQLDDKPDDAFLEKVKQECEPYCSYAALY 207
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 208 LWKSIE 213
>gi|407708386|ref|YP_006831971.1| protein fdhD [Bacillus thuringiensis MC28]
gi|407386071|gb|AFU16572.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis MC28]
Length = 291
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 94/169 (55%), Gaps = 5/169 (2%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSG 215
F L R I++QQ+ K T + +F+ G E V PE V ++ ++LR+ S
Sbjct: 123 FACLLRCIIHQQINLKFATVLTKQFVKRYGTEKNGVFFFPTPEIVANISIEELREQKFSQ 182
Query: 216 RKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVL 275
RKA Y+ LA + G L ++I ++ + L + GIG+W+V F++F L R ++
Sbjct: 183 RKAEYIVGLAERIARGTLDLASIETGTEEEVSAQLLPIRGIGAWTVQNFLMFGLGRKNMF 242
Query: 276 PINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
P D+G+++ VQ ++ L++ P + ++ + ++ PY S A+ YLW+ +E
Sbjct: 243 PKADIGIQRAVQGVFQLDDKPDDAFLENVKQECEPYCSYAALYLWKSIE 291
>gi|65317855|ref|ZP_00390814.1| COG0122: 3-methyladenine DNA glycosylase/8-oxoguanine DNA
glycosylase [Bacillus anthracis str. A2012]
Length = 210
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 104/186 (55%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 25 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 84
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L + +G L+ ++I ++ + L + GIG+
Sbjct: 85 IVANISIEELREQKFSQRKAEYIVGLGQSIASGTLNLASIETRAEEEVSARLLPIRGIGT 144
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++++ ++ PY S A+ Y
Sbjct: 145 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQLDDKPDDAFLEKVKQECEPYCSYAALY 204
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 205 LWKSIE 210
>gi|427427421|ref|ZP_18917465.1| DNA-3-methyladenine glycosylase II [Caenispirillum salinarum AK4]
gi|425883347|gb|EKV32023.1| DNA-3-methyladenine glycosylase II [Caenispirillum salinarum AK4]
Length = 231
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 87/162 (53%), Gaps = 1/162 (0%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASY 220
F +L R I+ QQ++ AG +I+ + +A G AG PE V+A + + L G+S K Y
Sbjct: 53 FGSLLRIIIDQQVSTAAGAAIWDKTVAAFDG-AGPTPEAVVAASEETLTACGLSRPKRRY 111
Query: 221 LHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDL 280
+ LA + +G L A+ + D ++ L+ V GIG WS+ ++++F L R DV P DL
Sbjct: 112 VRALAERIVDGRLDVDALADAPDDAVRAALSPVPGIGPWSIDIYLLFCLGRTDVWPAGDL 171
Query: 281 GVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRF 322
++ L+ L P M L E WRP+R + LWR+
Sbjct: 172 ALQAACHALHDLPARPDAKAMTPLAEAWRPWRGAVALLLWRW 213
>gi|359398457|ref|ZP_09191476.1| DNA-3-methyladenine glycosylase II [Novosphingobium
pentaromativorans US6-1]
gi|357600148|gb|EHJ61848.1| DNA-3-methyladenine glycosylase II [Novosphingobium
pentaromativorans US6-1]
Length = 205
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 84/160 (52%), Gaps = 3/160 (1%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASY 220
+ L R+I+ QQ++ A S+++R AL G G+ P+ +LA LR G+S +K Y
Sbjct: 41 YATLLRTIVGQQVSVAAAASVWSRLEALLG--EGLSPDALLAADFDALRGCGLSRQKQGY 98
Query: 221 LHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDL 280
L G L D + DD++ L + GIG WS ++++F+ RPD+ P DL
Sbjct: 99 ARSLCELVVAGAL-DLENLPEDDEAAIADLVRIKGIGRWSAEIYLLFAEGRPDIWPAGDL 157
Query: 281 GVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLW 320
V+ G+ + L+ P + +L E WRP+R A+ + W
Sbjct: 158 AVQAGLHRILGLDARPSEKETRELAEGWRPHRGSAAIFTW 197
>gi|229028276|ref|ZP_04184412.1| DNA-3-methyladenine glycosylase II [Bacillus cereus AH1271]
gi|228733040|gb|EEL83886.1| DNA-3-methyladenine glycosylase II [Bacillus cereus AH1271]
Length = 291
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 101/186 (54%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 106 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 165
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR S RKA Y+ L + +G L ++I ++ + L + GIG+
Sbjct: 166 IVANISIEELRGQKFSQRKAEYIVGLGQSIVSGTLDLASIETRAEEEVSAQLLPIRGIGA 225
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ LE+ P ++++ ++ PY S A+ Y
Sbjct: 226 WTVQNFLMFGLGRKNMFPKTDIGIQRAVQGIFQLEDKPDDVFLEKVKQECEPYCSYAALY 285
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 286 LWKSIE 291
>gi|423398622|ref|ZP_17375823.1| hypothetical protein ICU_04316 [Bacillus cereus BAG2X1-1]
gi|423409526|ref|ZP_17386675.1| hypothetical protein ICY_04211 [Bacillus cereus BAG2X1-3]
gi|401646790|gb|EJS64405.1| hypothetical protein ICU_04316 [Bacillus cereus BAG2X1-1]
gi|401655146|gb|EJS72681.1| hypothetical protein ICY_04211 [Bacillus cereus BAG2X1-3]
Length = 287
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 114/222 (51%), Gaps = 20/222 (9%)
Query: 123 SSEGEVEAAIRHLRNADRQLASLIDIHPP-------PTFDSF-HTP-------FLALTRS 167
S G+ E ++ +R+ S DI P F+ + +TP F L R
Sbjct: 66 SQTGDPEKVMKRMRSIFHWNDSFQDIQNHFLNTSLRPLFEMYAYTPIILEFDYFACLLRC 125
Query: 168 ILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSGRKASYLH 222
I++QQ+ K T + +F+ G E V PE V ++ ++LR+ S RKA Y+
Sbjct: 126 IIHQQINLKFATVLTEQFVKRYGIEKNGVFFFPTPEIVANISIEELREQKFSQRKAEYIV 185
Query: 223 DLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGV 282
LA+ +G L ++I ++ + L + GIG+W+V F++F L R ++ P D+G+
Sbjct: 186 GLAKHIVDGKLDLASIETRAEEEVSAQLLPIRGIGAWTVQNFLMFGLGRKNMFPKADIGI 245
Query: 283 RKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
++ VQ ++ L++ P + ++ + ++ PY S A+ YLW+ +E
Sbjct: 246 QRAVQGIFQLDDKPDDAFLENVKQECEPYCSYAALYLWKSIE 287
>gi|357976727|ref|ZP_09140698.1| HhH-GPD family protein [Sphingomonas sp. KC8]
Length = 226
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Query: 164 LTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHD 223
L R+I+ QQ++ A +++ R A G + P ++ + + LR G+S +K+ Y
Sbjct: 57 LLRTIVGQQVSVHAANAVWARLDAALG--SATDPAALIGASDETLRAAGLSRQKSGYARS 114
Query: 224 LARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVR 283
LA +G L D A + DD++ T L + GIG WS ++++F+ R DV P DL V+
Sbjct: 115 LADHVLSGRL-DLAALPDDDEAAITQLVDIKGIGRWSAEIYLLFAEGRSDVWPAGDLAVQ 173
Query: 284 KGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLW 320
V L L+E P + +L E WRP+R A+ + W
Sbjct: 174 IEVGRLMGLDERPSEKKTRELAEAWRPHRGAAAIFTW 210
>gi|338983464|ref|ZP_08632654.1| DNA-3-methyladenine glycosylase II [Acidiphilium sp. PM]
gi|338207595|gb|EGO95542.1| DNA-3-methyladenine glycosylase II [Acidiphilium sp. PM]
Length = 96
Score = 95.5 bits (236), Expect = 4e-17, Method: Composition-based stats.
Identities = 39/81 (48%), Positives = 54/81 (66%)
Query: 241 MDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQ 300
M D +L L + GIG W+V M +IF+L RPDV P++D GVR+G +L++ LE P+P
Sbjct: 4 MSDAALIERLCTLRGIGRWTVEMLLIFTLGRPDVFPVDDFGVREGYRLIHGLEAQPKPRA 63
Query: 301 MDQLCEKWRPYRSVASWYLWR 321
+ E + PYRS A+WYLWR
Sbjct: 64 FAAIGEAYAPYRSTAAWYLWR 84
>gi|50546795|ref|XP_500867.1| YALI0B14080p [Yarrowia lipolytica]
gi|49646733|emb|CAG83118.1| YALI0B14080p [Yarrowia lipolytica CLIB122]
Length = 360
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 81/146 (55%), Gaps = 7/146 (4%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALC---GGEAGVVP--ETVLALTPQQLRQIGVSG 215
F LTR I+ QQ++ A SI +F L G E G P + +L + LR G+SG
Sbjct: 139 FEHLTRGIIGQQVSGAAAESILKKFKKLFPVEGSEDGKFPSPQEILDTPTEALRSAGLSG 198
Query: 216 RKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVL 275
RKA Y+ L+ +++G LSD + D + L + GIG WS MF++F+L R DV
Sbjct: 199 RKAEYITCLSTAFKDGTLSDDWLSTASDDDVVDALVAIKGIGPWSADMFLLFALKRMDVF 258
Query: 276 PINDLGVRKGVQLLYSLEELPRPSQM 301
+ DLG+++GV + L+E P +++
Sbjct: 259 TLGDLGIQRGVSVY--LKERPHLAEI 282
>gi|225862466|ref|YP_002747844.1| endonuclease III domain protein [Bacillus cereus 03BB102]
gi|225786444|gb|ACO26661.1| endonuclease III domain protein [Bacillus cereus 03BB102]
Length = 287
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 103/186 (55%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 102 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 161
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L R +G L+ +++ + + L + GIG+
Sbjct: 162 IVANISIEELREQKFSQRKAEYIVGLGRSIVSGTLNLASMETEMEDEVSAQLLPIRGIGT 221
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++++ ++ PY S A+ Y
Sbjct: 222 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQLDDKPDDAFLEKVKQECEPYCSYAALY 281
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 282 LWKSIE 287
>gi|330863297|emb|CBX73421.1| hypothetical protein YEW_GD25410 [Yersinia enterocolitica W22703]
Length = 181
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 85/162 (52%), Gaps = 4/162 (2%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASY 220
F AL R+I+ QQ++ KA ++ R + L G V P T+ A + ++ G++ RKA Y
Sbjct: 20 FAALIRNIVDQQISVKAALTVNARLMTLVGT---VTPITIAAAPIEAIQGCGMTMRKAGY 76
Query: 221 LHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDL 280
+ A +G L SAI + D + L+ +NGIG W+ M +I SL RPDVL DL
Sbjct: 77 IKGAANAALDGSLDLSAISLLPDNEVIDQLSSLNGIGIWTAEMLLISSLSRPDVLSWGDL 136
Query: 281 GVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRF 322
+R+G+ LY + LPR PY + AS YLW
Sbjct: 137 AIRRGMMNLYRHKTLPRERFERYRRRY-TPYGTTASLYLWAL 177
>gi|93006271|ref|YP_580708.1| hypothetical protein Pcryo_1445 [Psychrobacter cryohalolentis K5]
gi|92393949|gb|ABE75224.1| HhH-GPD [Psychrobacter cryohalolentis K5]
Length = 219
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 84/161 (52%), Gaps = 10/161 (6%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-PETVLALTPQQLRQIGVSGRKAS 219
F L R+I+ QQL+ A +SI+ + + A + P+T++ + LR G+S +K
Sbjct: 54 FEQLMRAIIGQQLSVAAASSIWKKLL-----NANLTSPQTIIQVEDDILRTQGLSKQKIR 108
Query: 220 YLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIND 279
Y L + A+ + DK + +LT V GIG W+ M+++FSL R DVL ++D
Sbjct: 109 YTRSLVEHD----IDFEALTTISDKEVLEILTAVVGIGCWTAEMYLLFSLGRADVLAVDD 164
Query: 280 LGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLW 320
L ++ L L E P P Q+ + W P+RS AS LW
Sbjct: 165 LAIKVAAMDLLGLAERPTPKQLKMATKDWSPHRSAASLLLW 205
>gi|423480565|ref|ZP_17457255.1| hypothetical protein IEQ_00343 [Bacillus cereus BAG6X1-2]
gi|401147501|gb|EJQ55003.1| hypothetical protein IEQ_00343 [Bacillus cereus BAG6X1-2]
Length = 287
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 114/222 (51%), Gaps = 20/222 (9%)
Query: 123 SSEGEVEAAIRHLRNADRQLASLIDIHPP-------PTFDSF-HTP-------FLALTRS 167
S G+ E ++ +R+ S DI P F+ + +TP F L R
Sbjct: 66 SQTGDPEKVMKRMRSIFHWNDSFQDIQNHFLNTSLRPLFEMYAYTPIILEFDYFACLLRC 125
Query: 168 ILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PETVLALTPQQLRQIGVSGRKASYLH 222
I++QQ+ K T + +F+ G E V PE V ++ ++LR+ S RKA Y+
Sbjct: 126 IIHQQINLKFATVLTEQFVKRYGIEKNGVFFFPTPEIVANISIEELREQKFSQRKAEYIV 185
Query: 223 DLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGV 282
LA+ +G L ++I ++ + L + GIG+W+V F++F L R ++ P D+G+
Sbjct: 186 GLAKHIVDGKLDLASIETRAEEEVSAQLLPIRGIGAWTVQNFLMFGLGRKNMFPKADIGI 245
Query: 283 RKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
++ VQ ++ L++ P + ++ + ++ PY S A+ YLW+ +E
Sbjct: 246 QRAVQGVFQLDDKPDDAFLENVKQECEPYCSYAALYLWKSIE 287
>gi|196040065|ref|ZP_03107367.1| endonuclease III domain protein [Bacillus cereus NVH0597-99]
gi|196028920|gb|EDX67525.1| endonuclease III domain protein [Bacillus cereus NVH0597-99]
Length = 287
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 103/186 (55%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 102 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 161
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L + +G L+ ++I ++ + L + GIG+
Sbjct: 162 IVANISIEELREQKFSQRKAEYIVGLGQSIASGTLNLASIETRAEEEVSAQLLPIRGIGT 221
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L+ P + ++++ ++ PY S A+ Y
Sbjct: 222 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQLDGKPDDAFLEKVKQECEPYCSYAALY 281
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 282 LWKSIE 287
>gi|302679562|ref|XP_003029463.1| hypothetical protein SCHCODRAFT_42997 [Schizophyllum commune H4-8]
gi|300103153|gb|EFI94560.1| hypothetical protein SCHCODRAFT_42997, partial [Schizophyllum
commune H4-8]
Length = 363
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/175 (36%), Positives = 86/175 (49%), Gaps = 19/175 (10%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHT--PFLALTRSILYQQLAFKAGTSIYTRFIAL 188
A RHL + D + L P ++ T PF LT QQ+++ A SI RF L
Sbjct: 13 AKRHLISVDSRFEELFKRLPCKPYEQLETVHPFRRLTLQRRGQQISWLAARSINHRFRRL 72
Query: 189 CGG---------------EAGV-VPETVLALTPQQLRQIGVSGRKASY-LHDLARKYQNG 231
EA P V LR G+S RKA Y + DLAR++ +G
Sbjct: 73 YDPTLPEKPTQHSDSRDPEASFPTPAQVANTAIPTLRSAGLSQRKAEYTVQDLARRFADG 132
Query: 232 ILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGV 286
LS ++ D+ L ML V GIG W+V MF +FSL RP++LP+ DLGV++G+
Sbjct: 133 SLSTDKLLQATDEELAEMLIAVKGIGRWTVDMFAMFSLRRPNILPVGDLGVQRGL 187
>gi|167746355|ref|ZP_02418482.1| hypothetical protein ANACAC_01064 [Anaerostipes caccae DSM 14662]
gi|167654348|gb|EDR98477.1| base excision DNA repair protein, HhH-GPD family [Anaerostipes
caccae DSM 14662]
Length = 242
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 18/215 (8%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
E I +L++ D L ID + F AL SI+ QQ++ KA +++ R +
Sbjct: 36 EQEIGYLKSRDPVLGQAIDRIGFIKREVHTELFAALVNSIVGQQISTKAQETVWRR---I 92
Query: 189 CGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFT 248
G + V PE V T ++L+ G+S RKA Y+ A + +G L + D+ +
Sbjct: 93 KDGLSDVTPEKVGECTEEELQSFGISFRKAGYIKAAADRILSGSLDLEGLKEAGDEQVKK 152
Query: 249 MLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKW 308
LT + G+G W+ M M FS+ RPD++ +DL +++G+++LY + P + ++
Sbjct: 153 ELTKLPGVGVWTAEMLMTFSMQRPDIVSYSDLAIQRGMRMLYHHRTIT-PKLFAKYAGRY 211
Query: 309 RPYRSVASWYLWRFVEAKGAPSSAAAVAAGAALPQ 343
P +VAS YLW AG ALP+
Sbjct: 212 SPCGTVASLYLW--------------AVAGGALPE 232
>gi|295101942|emb|CBK99487.1| DNA-3-methyladenine glycosylase II [Faecalibacterium prausnitzii
L2-6]
Length = 198
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 95/187 (50%), Gaps = 28/187 (14%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-PETVLALTPQQLRQIGVSGRKAS 219
F A+ I+ QQ++ KA +I+ R E GVV VL ++L+ G++ RKA
Sbjct: 20 FSAVVHHIVGQQISTKAQATIWKRM----RDEFGVVDAAAVLGAGVEKLQSFGMTFRKAE 75
Query: 220 YLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIND 279
Y+ D ARK ++G I D L+ + G+G W+ M ++F + RPDV +D
Sbjct: 76 YITDFARKIESGEFDLEGIWQKPDDEAIRELSGLKGVGVWTAEMILLFCMQRPDVFSYDD 135
Query: 280 LGVRKGVQLLYSLEELPRPSQMDQLCEKWR----PYRSVASWYLWRFVEAKGAPSSAAAV 335
L +++G++++Y ++ R +L EK+R PY SVAS YLW
Sbjct: 136 LAIQRGLRMVYHHRKIDR-----KLFEKYRRRFSPYCSVASLYLW--------------A 176
Query: 336 AAGAALP 342
AAG A+P
Sbjct: 177 AAGGAVP 183
>gi|196045257|ref|ZP_03112489.1| endonuclease III domain protein [Bacillus cereus 03BB108]
gi|376264442|ref|YP_005117154.1| DNA-3-methyladenine glycosylase II [Bacillus cereus F837/76]
gi|196023841|gb|EDX62516.1| endonuclease III domain protein [Bacillus cereus 03BB108]
gi|364510242|gb|AEW53641.1| DNA-3-methyladenine glycosylase II [Bacillus cereus F837/76]
Length = 287
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 103/186 (55%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 102 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 161
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L + + L+ ++I ++ + L + GIG+
Sbjct: 162 RVANISIEELREQKFSQRKAEYIVGLGQSIASSTLNLASIETRAEEEVSAQLLPIRGIGT 221
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ L+ L++ P + ++++ ++ PY S A+ Y
Sbjct: 222 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGLFQLDDKPDDAFLEKVKQECEPYCSYAALY 281
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 282 LWKSIE 287
>gi|149204184|ref|ZP_01881152.1| DNA-3-methyladenine glycosylase II, putative [Roseovarius sp.
TM1035]
gi|149142626|gb|EDM30671.1| DNA-3-methyladenine glycosylase II, putative [Roseovarius sp.
TM1035]
Length = 209
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 92/163 (56%), Gaps = 10/163 (6%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-PETVLALTPQQLRQIGVSGRKAS 219
F L +I+ QQ++ + +I++R +AG P+ ++A+T LR +G+S +KA
Sbjct: 45 FARLLSAIVSQQVSVASANAIWSRL-----EQAGFTEPQRIVAVTDDDLRAVGLSRQKAR 99
Query: 220 YLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIND 279
Y LA + GI +A+ + + LT V+GIG W+ ++ +FSL R DV D
Sbjct: 100 YARALA---EAGI-DYAALRSAPTSEVIATLTQVSGIGVWTAEIYAMFSLGRADVFAPGD 155
Query: 280 LGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRF 322
L +++ V+LLY L E P+ + Q+ E W P+R+VA+ LW +
Sbjct: 156 LALQEAVRLLYDLPERPKERALRQMAEDWSPWRAVAARLLWAY 198
>gi|254724889|ref|ZP_05186672.1| endonuclease III domain protein [Bacillus anthracis str. A1055]
Length = 213
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 104/186 (55%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 28 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 87
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L + +G ++ ++I ++ + L + GIG+
Sbjct: 88 IVANISIEELREQKFSQRKAEYIVGLGQSIASGTVNLASIETRAEEEVSARLLPIRGIGT 147
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++++ ++ PY S A+ Y
Sbjct: 148 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQLDDKPDDAFLEKVKQECEPYCSYAALY 207
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 208 LWKSIE 213
>gi|148555342|ref|YP_001262924.1| HhH-GPD family protein [Sphingomonas wittichii RW1]
gi|148500532|gb|ABQ68786.1| HhH-GPD family protein [Sphingomonas wittichii RW1]
Length = 368
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 87/178 (48%), Gaps = 5/178 (2%)
Query: 149 HPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQL 208
+PPP + L R+I+ QQ++ A +I+ + + G AG+ PE V A L
Sbjct: 185 YPPPRIRD--RGYQTLLRTIVGQQVSVAAANAIWAKMETMVG--AGLAPEAVAAAPDDLL 240
Query: 209 RQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFS 268
R G+S +K +Y LA +G + D + DD+ +T + GIG WS ++++F+
Sbjct: 241 RATGLSRQKIAYARSLAEHVASGTI-DFDRLPADDEEAIAQMTAIKGIGRWSAEIYLLFA 299
Query: 269 LHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAK 326
R DV P DL V+ V L L E P + +L W P+R A+ + W A+
Sbjct: 300 EGRGDVWPAGDLAVQIEVGRLLGLPERPSERETRRLAHGWSPHRGAAAIFAWHSYNAR 357
>gi|118476177|ref|YP_893328.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis str. Al
Hakam]
gi|229182810|ref|ZP_04310049.1| DNA-3-methyladenine glycosylase II [Bacillus cereus BGSC 6E1]
gi|118415402|gb|ABK83821.1| DNA-3-methyladenine glycosylase II [Bacillus thuringiensis str. Al
Hakam]
gi|228600690|gb|EEK58271.1| DNA-3-methyladenine glycosylase II [Bacillus cereus BGSC 6E1]
Length = 291
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 103/186 (55%), Gaps = 13/186 (6%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 106 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPE 165
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ L + + L+ ++I ++ + L + GIG+
Sbjct: 166 RVANISIEELREQKFSQRKAEYIVGLGQSIASSTLNLASIETRAEEEVSAQLLPIRGIGT 225
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ L+ L++ P + ++++ ++ PY S A+ Y
Sbjct: 226 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGLFQLDDKPDDAFLEKVKQECEPYCSYAALY 285
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 286 LWKSIE 291
>gi|423514196|ref|ZP_17490712.1| hypothetical protein IG3_05678 [Bacillus cereus HuA2-1]
gi|402442879|gb|EJV74796.1| hypothetical protein IG3_05678 [Bacillus cereus HuA2-1]
Length = 286
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 103/186 (55%), Gaps = 14/186 (7%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 102 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTDQFVKRYGTEKNGVFFFPTPE 161
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ LA+ G L D A + + + + L + GIG+
Sbjct: 162 RVANISIEELREQKFSQRKAEYIVGLAKHIVGGKL-DLARIENETEEVSAQLLPIRGIGA 220
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L++ P + ++++ ++ PY S A+ Y
Sbjct: 221 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQLDDKPDDAFLEKVKQECEPYCSYAALY 280
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 281 LWKSIE 286
>gi|119505406|ref|ZP_01627480.1| HhH-GPD protein [marine gamma proteobacterium HTCC2080]
gi|119458861|gb|EAW39962.1| HhH-GPD protein [marine gamma proteobacterium HTCC2080]
Length = 215
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 98/205 (47%), Gaps = 12/205 (5%)
Query: 118 IARPLSSEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKA 177
I R LS+ E+ D ++A+ + + P F +L + ++ QQ++ +A
Sbjct: 14 IKRALSAAAEI----------DVRVATALGLIGLPAARKRDHGFDSLAKIVVGQQVSTRA 63
Query: 178 GTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSA 237
+I R + G+ + PE +L+ LR G+S +K SYL LA G L
Sbjct: 64 AEAITQRLLESLNGQ--LEPEILLSRDDDSLRAAGLSRQKISYLRSLATAVVEGALPLLD 121
Query: 238 IVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPR 297
+ M D + +T + G G+WS M+++FSL R D+ P DL VR G L L E P
Sbjct: 122 LPKMSDDEVLQRITAIRGFGAWSAQMYLMFSLGRTDIWPSGDLAVRVGFGRLLGLVERPT 181
Query: 298 PSQMDQLCEKWRPYRSVASWYLWRF 322
+ ++L + + PYRS + W +
Sbjct: 182 AKKTEELAKDFTPYRSALALLCWHY 206
>gi|114799381|ref|YP_762066.1| putative DNA-3-methyladenine glycosylase [Hyphomonas neptunium ATCC
15444]
gi|114739555|gb|ABI77680.1| putative DNA-3-methyladenine glycosylase [Hyphomonas neptunium ATCC
15444]
Length = 213
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 99/209 (47%), Gaps = 3/209 (1%)
Query: 124 SEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYT 183
S ++ A L AD LA D P + + + L R I +QQL+ KA +I+
Sbjct: 5 SRRRLKTACERLALADPALARAYDSLGVPEWRTSEPGYNMLGRMISHQQLSTKAAATIWG 64
Query: 184 RFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDD 243
R G V PET+LA P LR G+S K ++L +A G L+ + + D
Sbjct: 65 RVEVFLGE---VTPETLLAADPDALRACGLSRPKVAHLTSIAEAMVTGELNLARVCAADL 121
Query: 244 KSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQ 303
S L V GIG W+ +F+++++ D PI D+G+ + + L E Q
Sbjct: 122 DSARAELVSVRGIGPWTAELFLLYAVGAMDAFPIADVGLMEAHKQLGRYETRMESKIFTQ 181
Query: 304 LCEKWRPYRSVASWYLWRFVEAKGAPSSA 332
E WRP+R VA+ LW ++ A+ A SA
Sbjct: 182 HAEIWRPHRGVAAHLLWGWLNAERARDSA 210
>gi|393772212|ref|ZP_10360669.1| HhH-GPD [Novosphingobium sp. Rr 2-17]
gi|392722351|gb|EIZ79759.1| HhH-GPD [Novosphingobium sp. Rr 2-17]
Length = 205
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 87/162 (53%), Gaps = 3/162 (1%)
Query: 159 TPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKA 218
T + L R+I+ QQ++ A S++ R AL G + + PET+LA + LR G+S +K
Sbjct: 39 TGYATLLRTIVGQQVSVAAAASVWARLEALLGDD--LAPETLLAAEFEALRGCGLSRQKQ 96
Query: 219 SYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIN 278
Y L G L A+ +DD+ +L + GIG WS ++++F+ RPD+ P
Sbjct: 97 GYARSLCELVIAGSLDFDAL-PLDDEEAIDLLVKIKGIGRWSAEIYLLFAEGRPDIWPAG 155
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLW 320
DL V+ G+ + SL+ P + L E WRP+R A+ + W
Sbjct: 156 DLAVQAGLHKILSLDARPSERETRALAEAWRPHRGAAAIFTW 197
>gi|353236658|emb|CCA68648.1| related to MAG1-3-methyladenine DNA glycosylase [Piriformospora
indica DSM 11827]
Length = 433
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 91/193 (47%), Gaps = 47/193 (24%)
Query: 129 EAAIRHLRNADRQLASLIDIHPPPTFDSFHT-PFLAL-------TRSILY--------QQ 172
E A RHL + D + A + F+ PF+ L TR ++ QQ
Sbjct: 102 EEAERHLISVDHRWAGI--------FERLKCRPFVQLERVDPFSTREVIRTELTSRRGQQ 153
Query: 173 LAFKAGTSIYTRFIALCGGE-------------------AGVVPETVLALTPQQLRQIGV 213
+++KA S+ +F+ L VV ET LA LR G+
Sbjct: 154 ISWKAARSVNWKFMRLYDDTLPETVPPPEEYTAPERFPPPHVVAETSLA----TLRSAGL 209
Query: 214 SGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPD 273
S RKA Y+ DLA+ + +G LS ++ D+ L L V GIG W++ MF IFSL RP+
Sbjct: 210 SARKAEYIQDLAQHFSDGRLSAEKLITASDEELREALIAVRGIGPWTIDMFAIFSLRRPN 269
Query: 274 VLPINDLGVRKGV 286
+LP DLGV++G+
Sbjct: 270 ILPTGDLGVQRGL 282
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 7/44 (15%)
Query: 281 GVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVE 324
G KG LL P +M+ L W+PYRS+ WY+W V+
Sbjct: 391 GRNKGKPLLS-------PDEMESLTASWKPYRSLGVWYMWSLVD 427
>gi|317489751|ref|ZP_07948250.1| HhH-GPD superfamily base excision DNA repair protein [Eggerthella
sp. 1_3_56FAA]
gi|316911097|gb|EFV32707.1| HhH-GPD superfamily base excision DNA repair protein [Eggerthella
sp. 1_3_56FAA]
Length = 219
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 86/160 (53%), Gaps = 4/160 (2%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASY 220
F L I+ QQ++ KA T+I+ R + G V PE + A + +L+Q+G+S RK Y
Sbjct: 44 FAVLANCIVGQQISTKAQTTIWNRMLDRFGE---VTPEAMAACSDDELQQVGISFRKVGY 100
Query: 221 LHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDL 280
+ A + +G + + + D + L+ + GIG W+ M M FS+ RP++L DL
Sbjct: 101 IKGAAARVLSGEVDLEGLAELSDDEVCRTLSALPGIGVWTAEMLMTFSMQRPNILSWGDL 160
Query: 281 GVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLW 320
+ +G+++++ + P + ++ PY SVAS YLW
Sbjct: 161 AIHRGLRMVHHHRRIT-PELFAKYRRRYTPYGSVASLYLW 199
>gi|71082891|ref|YP_265610.1| DNA-3-methyladenine glycosylase I [Candidatus Pelagibacter ubique
HTCC1062]
gi|71062004|gb|AAZ21007.1| DNA-3-methyladenine glycosylase I [Candidatus Pelagibacter ubique
HTCC1062]
Length = 190
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 100/186 (53%), Gaps = 5/186 (2%)
Query: 142 LASLIDIHPPPT---FDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPE 198
++SLI+ + P+ S F +L +SI+ QQ++ A S++ + + +
Sbjct: 1 MSSLINKYKSPSEAVLTSRKDIFFSLCKSIIGQQISVAAANSVF--LKFKKKCKNKINAK 58
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
TV L+ QL+ G+SG+K + LA++ + + I M D+ L+ + IG
Sbjct: 59 TVSKLSSVQLKSCGLSGQKVRGIKSLAKQILDKSFNPRLIPKMSDEEAIIYLSQLRQIGR 118
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
WS M ++F+ +R ++ PI D+G+ +G+ Y + LP S + L +++ PY SVA+WY
Sbjct: 119 WSAEMILLFTYNRSNIWPIQDIGLLRGISKNYKKKYLPPESYVKLLNKRFSPYCSVATWY 178
Query: 319 LWRFVE 324
LWR ++
Sbjct: 179 LWRSID 184
>gi|284037159|ref|YP_003387089.1| HhH-GPD family protein [Spirosoma linguale DSM 74]
gi|283816452|gb|ADB38290.1| HhH-GPD family protein [Spirosoma linguale DSM 74]
Length = 207
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 101/200 (50%), Gaps = 9/200 (4%)
Query: 130 AAIRHLRNADRQLASLIDIHPPPTF--DSFHTPFLALTRSILYQQLAFKAGTSIYTRFIA 187
+A+ HL D +A +I P P D +LAL SI+ QQ++ KA +I++RF A
Sbjct: 7 SALTHLAQ-DPVMARIIAETPVPKLVNDYADDVYLALLESIVSQQISVKAADAIFSRFRA 65
Query: 188 LCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLF 247
L + + +L T +LR G+S +K YL +A + + + D+ +
Sbjct: 66 LFPDKYPQA-DALLLKTTDELRSAGLSFQKIKYLQSVAEFSLEKPIDRVHLDALTDEEIV 124
Query: 248 TMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLY-----SLEELPRPSQMD 302
L + G+G W+V M ++F L RPD+ PI+DL +R+ + Y L +
Sbjct: 125 QYLLPIKGVGRWTVEMLLMFVLDRPDIFPIDDLVIRQRMLRAYPEQTNGLTGKALYKVLL 184
Query: 303 QLCEKWRPYRSVASWYLWRF 322
+ E WRPYR+ AS YLWR+
Sbjct: 185 SIAEPWRPYRTTASRYLWRW 204
>gi|423671859|ref|ZP_17646863.1| hypothetical protein IKO_05137 [Bacillus cereus VDM034]
gi|423677680|ref|ZP_17652615.1| hypothetical protein IKS_05216 [Bacillus cereus VDM062]
gi|401290700|gb|EJR96389.1| hypothetical protein IKO_05137 [Bacillus cereus VDM034]
gi|401306150|gb|EJS11659.1| hypothetical protein IKS_05216 [Bacillus cereus VDM062]
Length = 286
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 102/186 (54%), Gaps = 14/186 (7%)
Query: 152 PTFDSF-HTP-------FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-----PE 198
P F+++ +TP F L R I++QQ+ K T + +F+ G E V PE
Sbjct: 102 PLFETYAYTPIILEFDYFACLLRCIIHQQINLKFATVLTDQFVKRYGTEKNGVFFFPTPE 161
Query: 199 TVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGS 258
V ++ ++LR+ S RKA Y+ LA+ G L D A + + + + L + GIG+
Sbjct: 162 RVANISIEELREQKFSQRKAEYIVGLAKHIVGGKL-DLARIQNETEEVSAQLLPIRGIGA 220
Query: 259 WSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWY 318
W+V F++F L R ++ P D+G+++ VQ ++ L+ P + ++++ ++ PY S A+ Y
Sbjct: 221 WTVQNFLMFGLGRKNMFPKADIGIQRAVQGVFQLDNKPDDAFLEKVKQECEPYCSYAALY 280
Query: 319 LWRFVE 324
LW+ +E
Sbjct: 281 LWKSIE 286
>gi|395492169|ref|ZP_10423748.1| HhH-GPD family protein [Sphingomonas sp. PAMC 26617]
Length = 207
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 86/172 (50%), Gaps = 5/172 (2%)
Query: 149 HPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQL 208
+PPP + F L R+I+ QQ++ + S Y + + G P ++A T +QL
Sbjct: 31 YPPPRISA--RGFGTLLRTIVGQQVSVTSAQSTYKKLEGIVGSLDD--PANIIAATDEQL 86
Query: 209 RQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFS 268
R G+S +KASY L+ +G L D + DD+ L V GIG WS ++++F+
Sbjct: 87 RAAGLSRQKASYARSLSELVASGAL-DLENLPEDDEEAIAKLVAVKGIGRWSAEIYLLFA 145
Query: 269 LHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLW 320
R DV P DL V+ + L E P + +L E WRP+R A+ + W
Sbjct: 146 EGRTDVWPAGDLAVQIEIGRLLGHEARPSEKLVRELAEAWRPHRGAAAIFAW 197
>gi|325971947|ref|YP_004248138.1| HhH-GPD family protein [Sphaerochaeta globus str. Buddy]
gi|324027185|gb|ADY13944.1| HhH-GPD family protein [Sphaerochaeta globus str. Buddy]
Length = 199
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 102/197 (51%), Gaps = 8/197 (4%)
Query: 128 VEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIA 187
++ AI L+ +D +L +I+ +++ F L + I+ Q L+ KA +IY R +A
Sbjct: 6 LQLAIETLKQSDPKLHQVIEKVGQLQYEAEQDGFAFLVQVIIGQMLSAKAADTIYARLVA 65
Query: 188 LCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLF 247
G + + ++ L LR +G++ RKA + LA + +++ ++ DK
Sbjct: 66 RLGKD--IDAASISGLDEDLLRSLGIARRKAQTILALAAMVEKNPTLLASLASLGDKECM 123
Query: 248 TMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEK 307
L GIG W+ M++IF L R D+LP+ D + + LY E++ + +
Sbjct: 124 ASLCQYKGIGPWTAKMYLIFVLDRNDILPLEDGAFLQAYRYLYGDEDIETRASV------ 177
Query: 308 WRPYRSVASWYLWRFVE 324
W+PYRS+A+ YL+RF++
Sbjct: 178 WKPYRSLAARYLYRFLD 194
>gi|388583742|gb|EIM24043.1| DNA glycosylase [Wallemia sebi CBS 633.66]
Length = 297
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 86/178 (48%), Gaps = 15/178 (8%)
Query: 133 RHLRNADRQLASLIDIHPPPTF----DSFHTPFLALTRSILYQQLAFKAGTSIYTRFIAL 188
+H + D + +S+ D P F D PF + SIL QQ+++KA ++ +FI
Sbjct: 13 KHYIHQDYRWSSIFDAVPCKPFEQGLDKPINPFRVICESILAQQISYKASKAVCYKFIRY 72
Query: 189 C-----------GGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSA 237
E PE V +LR+IG S RK Y LA+ + G ++
Sbjct: 73 FYPHLPEKREKDDPEEFPTPEQVANTEVSRLREIGFSVRKGEYAVGLAQAFVRGEITPRK 132
Query: 238 IVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEEL 295
++ D+ L MLT + GIG W+VHM IF L R D+LP DLGV+ G+ + EL
Sbjct: 133 LIEASDEELMEMLTNIRGIGPWTVHMLSIFMLRRVDILPPADLGVQLGLVKFWLGHEL 190
>gi|154300990|ref|XP_001550909.1| hypothetical protein BC1G_10633 [Botryotinia fuckeliana B05.10]
Length = 338
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 71/131 (54%), Gaps = 17/131 (12%)
Query: 208 LRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIF 267
+R G+S RKA Y+ LA K+ NG L+ ++ + +F L V G+G WSV MF F
Sbjct: 195 IRTAGLSQRKAEYISGLALKFTNGDLTTPFLLTASYEEVFDSLIQVRGLGKWSVEMFACF 254
Query: 268 SLHRPDVLPINDLGVRKGVQLLYS--LEELPRP---------------SQMDQLCEKWRP 310
+L R DV DLGV++G+ L +E+L + +M+++ EK+ P
Sbjct: 255 ALKRLDVFSTGDLGVQRGMAALVGRDVEKLKKAGKGAKGGGKWKYMSEKEMEEIAEKFSP 314
Query: 311 YRSVASWYLWR 321
YR++ WY+WR
Sbjct: 315 YRTIFMWYMWR 325
>gi|392961987|ref|ZP_10327434.1| HhH-GPD family protein [Pelosinus fermentans DSM 17108]
gi|421056158|ref|ZP_15519085.1| HhH-GPD family protein [Pelosinus fermentans B4]
gi|421061392|ref|ZP_15523726.1| HhH-GPD family protein [Pelosinus fermentans B3]
gi|421067287|ref|ZP_15528783.1| HhH-GPD family protein [Pelosinus fermentans A12]
gi|421072863|ref|ZP_15533967.1| HhH-GPD family protein [Pelosinus fermentans A11]
gi|392438574|gb|EIW16397.1| HhH-GPD family protein [Pelosinus fermentans B4]
gi|392445290|gb|EIW22622.1| HhH-GPD family protein [Pelosinus fermentans A11]
gi|392449926|gb|EIW27001.1| HhH-GPD family protein [Pelosinus fermentans B3]
gi|392450016|gb|EIW27074.1| HhH-GPD family protein [Pelosinus fermentans A12]
gi|392452745|gb|EIW29650.1| HhH-GPD family protein [Pelosinus fermentans DSM 17108]
Length = 206
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 107/191 (56%), Gaps = 4/191 (2%)
Query: 132 IRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGG 191
I +L+N D L + + + F AL +I+ QQ++ KA +++ R + L
Sbjct: 16 IEYLQNVDPILGAAMKRLGKIDREVIPDLFAALIYAIVGQQISVKAAYTVWHR-MQLHFE 74
Query: 192 EAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLT 251
E ++P+ + T ++++Q G+S RKA Y+ ++ + L+ + ++ D+ + L+
Sbjct: 75 E--MIPQQIALATVEEIQQCGMSTRKAIYIKNIGEAVMHSRLNLIELYDLPDEEVIKRLS 132
Query: 252 MVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPY 311
+NGIG W+ M ++ S+ RPD++ D+ +R+G+ LY+L + + Q ++ +++ PY
Sbjct: 133 QINGIGVWTAEMLLLNSMERPDIVSWGDIAIRRGMMNLYNLTTITK-EQFEKYKKQYSPY 191
Query: 312 RSVASWYLWRF 322
SVAS YLW+
Sbjct: 192 GSVASIYLWKL 202
>gi|400289203|ref|ZP_10791235.1| hypothetical protein PPAM21_14104 [Psychrobacter sp. PAMC 21119]
Length = 210
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 87/163 (53%), Gaps = 10/163 (6%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVV-PETVLALTPQQLRQIGVSGRKAS 219
F L R+++ QQL+ A SI+ + +A AG+ P + T + L+ G+S +K
Sbjct: 45 FEQLMRAMVGQQLSVAAAASIWKKLVA-----AGLTTPCAIREATDETLKTQGLSKQKTR 99
Query: 220 YLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPIND 279
Y+ L + + SA+ + +++ LT V GIG W+ M+++FSL R D+L ++D
Sbjct: 100 YVRSLV----DHDIDFSALGALPNEAAIKTLTAVTGIGHWTAEMYLLFSLKRDDILAVDD 155
Query: 280 LGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRF 322
L ++ + L E P P Q+ L E W P+RS AS LW +
Sbjct: 156 LAIKVAAMTVLGLAERPTPKQLKILTESWSPHRSAASLLLWSY 198
>gi|334140287|ref|YP_004533489.1| DNA-3-methyladenine glycosylase II [Novosphingobium sp. PP1Y]
gi|333938313|emb|CCA91671.1| DNA-3-methyladenine glycosylase II [Novosphingobium sp. PP1Y]
Length = 205
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 83/160 (51%), Gaps = 3/160 (1%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASY 220
+ L R+I+ QQ++ A S+++R AL G G+ P+ +L LR G+S +K Y
Sbjct: 41 YATLLRTIVGQQVSVAAAASVWSRLEALLG--QGLPPDALLEADFDALRGCGLSRQKQGY 98
Query: 221 LHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDL 280
L G L D + DD++ L + GIG WS ++++F+ RPD+ P DL
Sbjct: 99 ARSLCELVVAGAL-DLENLPEDDEAAIADLVRIKGIGRWSAEIYLLFAEGRPDIWPAGDL 157
Query: 281 GVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLW 320
V+ G+ + L+ P + +L E WRP+R A+ + W
Sbjct: 158 AVQSGLHRILGLDARPSEKETRELAENWRPHRGSAAIFTW 197
>gi|194691800|gb|ACF79984.1| unknown [Zea mays]
gi|413948593|gb|AFW81242.1| hypothetical protein ZEAMMB73_471768 [Zea mays]
gi|413948594|gb|AFW81243.1| hypothetical protein ZEAMMB73_471768 [Zea mays]
Length = 107
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 53/66 (80%), Gaps = 4/66 (6%)
Query: 279 DLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRFVEAKGAPSSAAAVAAG 338
DLGVRKGVQ+LY+L+++PRPSQMD+LCE+WRPYRSV +WY+WR +E+K P A +
Sbjct: 25 DLGVRKGVQMLYALQDVPRPSQMDRLCERWRPYRSVGAWYMWRLIESK-VPQPAPPI--- 80
Query: 339 AALPQP 344
ALP P
Sbjct: 81 PALPSP 86
>gi|404252568|ref|ZP_10956536.1| HhH-GPD family protein [Sphingomonas sp. PAMC 26621]
Length = 207
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 86/172 (50%), Gaps = 5/172 (2%)
Query: 149 HPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQL 208
+PPP + F L R+I+ QQ++ + S Y + + G P ++A T +QL
Sbjct: 31 YPPPRISA--RGFGTLLRTIVGQQVSVTSAQSTYKKLEGIVGSLDD--PANIIAATDEQL 86
Query: 209 RQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFS 268
R G+S +KASY L+ +G L D + DD+ L V GIG WS ++++F+
Sbjct: 87 RAAGLSRQKASYARSLSELVTSGAL-DLENLPEDDEEAIAKLVAVKGIGRWSAEIYLLFA 145
Query: 269 LHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLW 320
R D+ P DL V+ + L E P + +L E WRP+R A+ + W
Sbjct: 146 EGRTDIWPAGDLAVQIEIGRLLGHEARPSEKLVRELAEAWRPHRGAAAIFAW 197
>gi|254282691|ref|ZP_04957659.1| HhH-GPD family protein [gamma proteobacterium NOR51-B]
gi|219678894|gb|EED35243.1| HhH-GPD family protein [gamma proteobacterium NOR51-B]
Length = 209
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 90/162 (55%), Gaps = 2/162 (1%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASY 220
F AL R I+ QQ++ A +SI R A GGE + + V + ++LR G+S +K +Y
Sbjct: 44 FAALARIIIGQQVSVAAASSIAARVEAALGGE--ISADQVSRVGDEKLRSAGLSRQKVNY 101
Query: 221 LHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDL 280
L +LAR + + +V +D ++ +T + G G WS M+++FSL R D+ P+ DL
Sbjct: 102 LRELARHCREEGFAPERLVREEDDAVLEAITAIKGFGVWSAQMYLMFSLGRTDIWPVGDL 161
Query: 281 GVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRF 322
VR G + +L+E P + +L E + P+RS + W+F
Sbjct: 162 AVRAGFGRIMALDERPDEHETARLGEVFSPHRSALAMLCWKF 203
>gi|313681033|ref|YP_004058772.1| hhh-gpd family protein [Oceanithermus profundus DSM 14977]
gi|313153748|gb|ADR37599.1| HhH-GPD family protein [Oceanithermus profundus DSM 14977]
Length = 195
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 98/190 (51%), Gaps = 11/190 (5%)
Query: 131 AIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYTRFIALCG 190
A+ HL D +A LI+ H P + H F +L R+++ QQL+ +++ R G
Sbjct: 12 ALAHLAR-DPVMARLIERHGPYRW-GLHPVFPSLVRAVVGQQLSNAVARTMFRRVQQATG 69
Query: 191 GEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTML 250
E PE +LAL + LR++G++ K L LA + G + + D L
Sbjct: 70 LE----PERLLALGEEGLRELGLARAKGRALVGLAEAQREGYFE--GLEGLPDDVAAARL 123
Query: 251 TMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRP 310
+ G+G W+ M +IFSL R DV P DLG+ + + LY L ++++ L E++RP
Sbjct: 124 VRLRGVGPWTAQMVLIFSLGRMDVWPTGDLGMVRQAERLYGLAT---RAEVEALGERFRP 180
Query: 311 YRSVASWYLW 320
+RS A+ YLW
Sbjct: 181 WRSAAAHYLW 190
>gi|357037182|ref|ZP_09098982.1| HhH-GPD family protein [Desulfotomaculum gibsoniae DSM 7213]
gi|355361347|gb|EHG09102.1| HhH-GPD family protein [Desulfotomaculum gibsoniae DSM 7213]
Length = 205
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 91/162 (56%), Gaps = 4/162 (2%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASY 220
F AL +I+ Q ++ + +++ R I GE + PE + TP +RQ G++ +KA
Sbjct: 45 FAALVYAIIGQLVSVHSAKTVWER-IQESIGE--ITPENLSGFTPDDVRQCGMTMKKAVC 101
Query: 221 LHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDL 280
+ DL+++ G L + + + D + LT + GIG W+ M +I + RPD++ D+
Sbjct: 102 ICDLSKEIVQGNLCLNNLRELPDSEIIRHLTAIRGIGRWTAEMLLINCMERPDIVSWEDI 161
Query: 281 GVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWRF 322
+R+G++ LY + +L + Q + +++ PY SVAS YLW+
Sbjct: 162 AIRRGMEKLYGIPKLTK-KQFESYKKRYSPYGSVASIYLWKL 202
>gi|254468232|ref|ZP_05081638.1| DNA-3-methyladenine glycosylase 1 [beta proteobacterium KB13]
gi|207087042|gb|EDZ64325.1| DNA-3-methyladenine glycosylase 1 [beta proteobacterium KB13]
Length = 201
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 89/161 (55%), Gaps = 5/161 (3%)
Query: 163 ALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVP-ETVLALTPQQLRQIGVSGRKASYL 221
++ +S+ +QQL KA ++IY RF+ L V P E + L IG+S +KA +
Sbjct: 42 SIIKSVFFQQLHPKAASTIYQRFLDLFNN---VFPTEQDIIKNKDLLSSIGLSNQKAQTI 98
Query: 222 HDLARKYQNGIL-SDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDL 280
+A Y + ++ I+ ++ + + T + G+G W+V M +IF+ +PD++P +DL
Sbjct: 99 LSIADGYLKQFIPNEKKIMLLNGQEIIEQFTQIKGVGVWTVQMMLIFNQGQPDIMPSSDL 158
Query: 281 GVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSVASWYLWR 321
+RK + L P+Q+ + E PYR++A+WYLW+
Sbjct: 159 AIRKKYSFFKQRDCLITPTQLIKETEYLSPYRTIAAWYLWQ 199
>gi|374372927|ref|ZP_09630588.1| HhH-GPD family protein [Niabella soli DSM 19437]
gi|373235003|gb|EHP54795.1| HhH-GPD family protein [Niabella soli DSM 19437]
Length = 210
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 97/197 (49%), Gaps = 3/197 (1%)
Query: 124 SEGEVEAAIRHLRNADRQLASLIDIHPPPTFDSFHTPFLALTRSILYQQLAFKAGTSIYT 183
S+ + + L D+ LA++++ + PP + F +L IL QQ++ + +
Sbjct: 6 SDKNFKRICKQLAKKDKHLAAVLNAYGPPPMWTRPNSFESLVHIILEQQVSLASALAALK 65
Query: 184 RFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDD 243
+ GG + P +L + Q LR VS +K Y+ LA+ + L A++ + D
Sbjct: 66 KLQEFTGG---ITPGKILRMDDQALRACYVSRQKMIYIRGLAKAIADKELDLDAMLLLTD 122
Query: 244 KSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQ 303
++ LT GIG+W+V ++++F L R D+ P DL ++ L +L +
Sbjct: 123 NAVRAKLTTFKGIGNWTVDVYLMFVLQRTDIFPSGDLAAVNALKQLKTLAAATPREALIA 182
Query: 304 LCEKWRPYRSVASWYLW 320
+ E+W PYR++A+ LW
Sbjct: 183 IAEEWMPYRTIATMILW 199
>gi|374812908|ref|ZP_09716645.1| methylated-DNA--[protein]-cysteine S-methyltransferase [Treponema
primitia ZAS-1]
Length = 216
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 74/126 (58%), Gaps = 1/126 (0%)
Query: 195 VVPETVLALTPQQLRQIGVSGRKASYLHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVN 254
+ + + L+ ++++ G++ RKA Y+ D A K ++G L + I + D + T L+ +
Sbjct: 70 ITVDAITDLSIDEIQKFGMTFRKAEYIKDFANKIKSGELILNDINDKSDDEIITYLSALK 129
Query: 255 GIGSWSVHMFMIFSLHRPDVLPINDLGVRKGVQLLYSLEELPRPSQMDQLCEKWRPYRSV 314
GIG W+ M MIF L RPDVL DL + +G+++LY + + + ++ K+ PY +V
Sbjct: 130 GIGVWTAEMLMIFCLQRPDVLSYTDLAIHRGLRMLYHHRNIDKK-KFEKYRRKFSPYGTV 188
Query: 315 ASWYLW 320
AS Y+W
Sbjct: 189 ASLYIW 194
>gi|421613727|ref|ZP_16054799.1| HhH-GPD family protein [Rhodopirellula baltica SH28]
gi|408495498|gb|EKK00085.1| HhH-GPD family protein [Rhodopirellula baltica SH28]
Length = 198
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 88/163 (53%), Gaps = 9/163 (5%)
Query: 161 FLALTRSILYQQLAFKAGTSIYTRFIALCGGEAGVVPETVLALTPQQLRQIGVSGRKASY 220
F L R +L QQ++ ++ S + + L E + P ++ L+ QQ R GVS +K Y
Sbjct: 24 FETLARIVLEQQVSLRSAESTFHKLQQLL--EGPLTPRGIVGLSAQQTRACGVSRQKHRY 81
Query: 221 LHDLARKYQNGILSDSAIVNMDDKSLFTMLTMVNGIGSWSVHMFMIFSLHRPDVLPINDL 280
L+ LA +G + +M D+ LT GIG WS ++++ +L+RPD+LP DL
Sbjct: 82 LNQLAADIVDGRFVLDRLPDMSDQEARDQLTARLGIGHWSAEVYLMSALNRPDILPFGDL 141
Query: 281 GVRKGVQLLYSLEELPRPSQMDQL---CEKWRPYRSVASWYLW 320
G+ KGV+ L + R D + ++WRPYRS+A+ +W
Sbjct: 142 GLLKGVEEL----DGGRYDDFDAIIRRADRWRPYRSMATRLVW 180
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.129 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,909,273,492
Number of Sequences: 23463169
Number of extensions: 246644404
Number of successful extensions: 1756148
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1763
Number of HSP's successfully gapped in prelim test: 3157
Number of HSP's that attempted gapping in prelim test: 1729306
Number of HSP's gapped (non-prelim): 21668
length of query: 373
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 229
effective length of database: 8,980,499,031
effective search space: 2056534278099
effective search space used: 2056534278099
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 77 (34.3 bits)