Your job contains 1 sequence.
>039605
MAAPALTSSLSYSLATATKPFGNNSCFHGNGIPISSPPSSLLRPYQKPSIKYSSSSRKND
MSISASASASSPPSDLDAFKFDAIKESIVSRETTRRYMTDMITHADTDVVVVGAGSAGLS
CAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALF
TSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAK
VVVSSCGHDGPFGATGVRGMKALDMNTAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMG
PTFGAMMISGQKAAHLALKSLGQPNAMDGTYVGSIHPELVLAASSPAEIADA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 039605
(352 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2160130 - symbol:THI1 species:3702 "Arabidopsi... 1103 9.7e-112 1
CGD|CAL0003455 - symbol:THI4 species:5476 "Candida albica... 483 1.8e-68 2
SGD|S000003376 - symbol:THI4 "Thiazole synthase, abundant... 394 1.6e-53 2
POMBASE|SPBC26H8.01 - symbol:thi2 "thiazole biosynthetic ... 491 6.9e-47 1
UNIPROTKB|G4NKA9 - symbol:MGG_03098 "Thiazole biosyntheti... 487 1.8e-46 1
ASPGD|ASPL0000018231 - symbol:thiF species:162425 "Emeric... 463 6.4e-44 1
>TAIR|locus:2160130 [details] [associations]
symbol:THI1 species:3702 "Arabidopsis thaliana"
[GO:0009228 "thiamine biosynthetic process" evidence=IEA;IGI;TAS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0018131 "oxazole or
thiazole biosynthetic process" evidence=IGI;IMP] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0009579 "thylakoid" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0009409 "response to
cold" evidence=IEP;RCA] [GO:0010319 "stromule" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0000023 "maltose
metabolic process" evidence=RCA] [GO:0009637 "response to blue
light" evidence=RCA] [GO:0010155 "regulation of proton transport"
evidence=RCA] [GO:0019252 "starch biosynthetic process"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0043085 "positive regulation of catalytic
activity" evidence=RCA] [GO:0046777 "protein autophosphorylation"
evidence=RCA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR002922 GO:GO:0005739 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009570 GO:GO:0046872 GO:GO:0009409
GO:GO:0008270 GO:GO:0009941 GO:GO:0006974 GO:GO:0009579
GO:GO:0010319 GO:GO:0009228 EMBL:AB005232 GO:GO:0018131 EMBL:U17589
EMBL:AF419604 EMBL:AF428355 EMBL:AF428385 EMBL:AY054216
EMBL:AY058094 EMBL:AY143082 IPI:IPI00541324 PIR:S71191
RefSeq:NP_200288.1 UniGene:At.24888 PDB:1RP0 PDBsum:1RP0
ProteinModelPortal:Q38814 SMR:Q38814 IntAct:Q38814 STRING:Q38814
PaxDb:Q38814 PRIDE:Q38814 EnsemblPlants:AT5G54770.1 GeneID:835567
KEGG:ath:AT5G54770 TAIR:At5g54770 eggNOG:COG1635
HOGENOM:HOG000106048 InParanoid:Q38814 KO:K03146 OMA:CMDPNTI
PhylomeDB:Q38814 ProtClustDB:PLN02661
BioCyc:MetaCyc:AT5G54770-MONOMER EvolutionaryTrace:Q38814
Genevestigator:Q38814 GermOnline:AT5G54770 HAMAP:MF_03158
PANTHER:PTHR10617:SF54 TIGRFAMs:TIGR00292 Uniprot:Q38814
Length = 349
Score = 1103 (393.3 bits), Expect = 9.7e-112, P = 9.7e-112
Identities = 226/298 (75%), Positives = 244/298 (81%)
Query: 75 DLDAFKFDAIKESIVSRETTRRYMTDMITHADTDXXXXGAGSAGLSCAYEISKNPNVQVA 134
DL+AF FD IKESIVSRE TRRYMTDMIT+A+TD GAGSAGLS AYEISKNPNVQVA
Sbjct: 52 DLNAFTFDPIKESIVSREMTRRYMTDMITYAETDVVVVGAGSAGLSAAYEISKNPNVQVA 111
Query: 135 IIEQXXX--------XXXXXXXXXRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186
IIEQ RKPAHLFLDE+G+ YDEQD YVV+KHAALFTSTIMS
Sbjct: 112 IIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAALFTSTIMS 171
Query: 187 KLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSC 246
KLLARPNVKLFNAVAAEDLIVKGNRVGG+VTNWALV+ NH +QSCMDPNVMEAK+VVSSC
Sbjct: 172 KLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSC 231
Query: 247 GHDGPFGATGVR------------GMKALDMNTAEDAIVKLTREIVPGMIVAGMEVAEID 294
GHDGPFGATGV+ GMKALDMNTAEDAIV+LTRE+VPGMIV GMEVAEID
Sbjct: 232 GHDGPFGATGVKRLKSIGMIDHVPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEID 291
Query: 295 GAPRMGPTFGAMMISGQKAAHLALKSLGQPNAMDGTYVGSIHPELVLAASSPAEIADA 352
GAPRMGPTFGAMMISGQKA LALK+LG PNA+DGT VG++ PELVLAA+ AE DA
Sbjct: 292 GAPRMGPTFGAMMISGQKAGQLALKALGLPNAIDGTLVGNLSPELVLAAADSAETVDA 349
>CGD|CAL0003455 [details] [associations]
symbol:THI4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0009228 "thiamine biosynthetic process" evidence=IEA]
[GO:0000002 "mitochondrial genome maintenance" evidence=IEA]
[GO:0052837 "thiazole biosynthetic process" evidence=IEA]
[GO:0008198 "ferrous iron binding" evidence=IEA] InterPro:IPR002922
CGD:CAL0003455 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0009228 EMBL:AACQ01000003 EMBL:AACQ01000004 eggNOG:COG1635
KO:K03146 HAMAP:MF_03158 PANTHER:PTHR10617:SF54 TIGRFAMs:TIGR00292
RefSeq:XP_723050.1 RefSeq:XP_723197.1 ProteinModelPortal:Q5ANB7
SMR:Q5ANB7 STRING:Q5ANB7 GeneID:3635160 GeneID:3635321
KEGG:cal:CaO19.13407 KEGG:cal:CaO19.5986 Uniprot:Q5ANB7
Length = 354
Score = 483 (175.1 bits), Expect = 1.8e-68, Sum P(2) = 1.8e-68
Identities = 100/204 (49%), Positives = 134/204 (65%)
Query: 75 DLDAFKFDAIKESIVSRETTRRYMTDMITHADTDXXXXGAGSAGLSCAYEISKN-PNVQV 133
D + FKF I+ES VSR TRRY D+ A++D GAGSAGLS AY + KN P++++
Sbjct: 41 DWNEFKFAPIRESTVSRAMTRRYFADLDKFAESDIVIIGAGSAGLSAAYTLGKNRPDLKI 100
Query: 134 AIIEQXXX--------XXXXXXXXXRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIM 185
AIIE RKPAHLFLD++G+DY+++ +YVV+KHAALF ST+M
Sbjct: 101 AIIEASVSPGGGCWLGGQLFSAMVLRKPAHLFLDDMGLDYEDEGDYVVVKHAALFMSTLM 160
Query: 186 SKLLARPNVKLFNAVAAEDLIVKGN------RVGGIVTNWALVSMNHDSQSCMDPNVMEA 239
SK+L PN+KLFNA A EDLI + + R+ G+V NWA ++HD+QSCMDPN +
Sbjct: 161 SKVLQFPNIKLFNATAVEDLITRKDPATNLQRIAGVVVNWA--QLDHDTQSCMDPNTINC 218
Query: 240 KVVVSSCGHDGPFGATGVRGMKAL 263
VV+S+ GHDGPFGA + ++ L
Sbjct: 219 NVVLSTSGHDGPFGAFTAKRLEQL 242
Score = 230 (86.0 bits), Expect = 1.8e-68, Sum P(2) = 1.8e-68
Identities = 52/97 (53%), Positives = 62/97 (63%)
Query: 241 VVVSSCGHDGPFGATGVRGMKALDMNTAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMG 300
+ S P + GMK LDMN AEDAIVK TRE+VPG+++AGME+AE+DG+ RMG
Sbjct: 258 ITTSKLQEPEPISNFQLGGMKGLDMNKAEDAIVKGTREVVPGLVIAGMELAEVDGSNRMG 317
Query: 301 PTFGAMMISGQKAAHLALKSLG---QPN-AMDGTYVG 333
PTFGAM +SG KAA L L Q N A G Y G
Sbjct: 318 PTFGAMALSGVKAAESVLNVLELRKQQNEACYGAYKG 354
>SGD|S000003376 [details] [associations]
symbol:THI4 "Thiazole synthase, abundant protein involved in
the formation of the" species:4932 "Saccharomyces cerevisiae"
[GO:0005829 "cytosol" evidence=IDA] [GO:0052837 "thiazole
biosynthetic process" evidence=IDA] [GO:0000002 "mitochondrial
genome maintenance" evidence=IMP] [GO:0008198 "ferrous iron
binding" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0009228 "thiamine
biosynthetic process" evidence=IEA;IMP] [GO:0046872 "metal ion
binding" evidence=IEA] SGD:S000003376 InterPro:IPR002922
GO:GO:0005829 GO:GO:0005634 EMBL:BK006941 GO:GO:0008198
GO:GO:0000002 GO:GO:0009228 EMBL:X85807 EMBL:Z72930 eggNOG:COG1635
HOGENOM:HOG000106048 KO:K03146 OMA:CMDPNTI HAMAP:MF_03158
PANTHER:PTHR10617:SF54 TIGRFAMs:TIGR00292 OrthoDB:EOG45MRF9
EMBL:X61669 EMBL:Z72929 PIR:S25321 RefSeq:NP_011660.1 PDB:3FPZ
PDBsum:3FPZ ProteinModelPortal:P32318 SMR:P32318 DIP:DIP-1703N
IntAct:P32318 MINT:MINT-408091 STRING:P32318 EnsemblFungi:YGR144W
GeneID:853047 KEGG:sce:YGR144W CYGD:YGR144w
EvolutionaryTrace:P32318 NextBio:972960 Genevestigator:P32318
GermOnline:YGR144W GO:GO:0052837 Uniprot:P32318
Length = 326
Score = 394 (143.8 bits), Expect = 1.6e-53, Sum P(2) = 1.6e-53
Identities = 89/179 (49%), Positives = 110/179 (61%)
Query: 75 DLDAFKFDAIKESIVSRETTRRYMTDMITHADTDXXXXGAGSAGLSCAYEISKN-PNVQV 133
D FKF I+ES VSR T RY D+ A +D GAGS+GLS AY I+KN P+++V
Sbjct: 34 DWSDFKFAPIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKV 93
Query: 134 AIIEQXXX--------XXXXXXXXXRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIM 185
IIE RKPAHLFL EL I Y+++ +YVV+KHAALF ST++
Sbjct: 94 CIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHAALFISTVL 153
Query: 186 SKLLARPNVKLFNAVAAEDLIV-----KGN-RVGGIVTNWALVSMNHDSQSCMDPNVME 238
SK+L PNVKLFNA EDL+ KG V G+VTNW LV+ H +Q CMDPNV+E
Sbjct: 154 SKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIE 212
Score = 177 (67.4 bits), Expect = 1.6e-53, Sum P(2) = 1.6e-53
Identities = 46/93 (49%), Positives = 54/93 (58%)
Query: 241 VVVSSCGHDGPFGATGVR------------GMKALDMNTAE-DAIVKLTREI-VPGMIVA 286
V++S+ GHDGPFGA + GMK LDMN AE D ++ V M A
Sbjct: 230 VILSTTGHDGPFGAFCAKRIVDIDQNQKLGGMKGLDMNHAEHDVVIHSGAYAGVDNMYFA 289
Query: 287 GMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 319
GMEVAE+DG RMGPTFGAM +SG AA LK
Sbjct: 290 GMEVAELDGLNRMGPTFGAMALSGVHAAEQILK 322
>POMBASE|SPBC26H8.01 [details] [associations]
symbol:thi2 "thiazole biosynthetic enzyme" species:4896
"Schizosaccharomyces pombe" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=ISS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009228 "thiamine biosynthetic process"
evidence=IMP] [GO:0018131 "oxazole or thiazole biosynthetic
process" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] PomBase:SPBC26H8.01 InterPro:IPR002922 GO:GO:0005829
GO:GO:0005739 GO:GO:0005634 GO:GO:0046872 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0009228 GO:GO:0018131
eggNOG:COG1635 HOGENOM:HOG000106048 KO:K03146 OMA:CMDPNTI
HAMAP:MF_03158 PANTHER:PTHR10617:SF54 TIGRFAMs:TIGR00292
EMBL:X82363 PIR:T40013 RefSeq:NP_596642.1 ProteinModelPortal:P40998
SMR:P40998 STRING:P40998 EnsemblFungi:SPBC26H8.01.1 GeneID:2540526
KEGG:spo:SPBC26H8.01 OrthoDB:EOG45MRF9 NextBio:20801653
Uniprot:P40998
Length = 328
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 102/203 (50%), Positives = 138/203 (67%)
Query: 77 DAFKFDAIKESIVSRETTRRYMTDMITHADTDXXXXGAGSAGLSCAYEI-SKNPNVQVAI 135
++F F I+ES VSR TRRY +D+ +A++D GAGSAGL+ AY I ++ P++++AI
Sbjct: 47 ESFSFAPIRESTVSRAMTRRYFSDLDKYAESDIVIVGAGSAGLTAAYYIGTRRPDLKIAI 106
Query: 136 IEQXXX--------XXXXXXXXXRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMSK 187
IE RKPA LFL+E+G+ Y+++ +YVV+KHAALFTST+M++
Sbjct: 107 IEASVAPGGGAWLGGQLFSAMVVRKPADLFLNEIGVPYEDEGDYVVVKHAALFTSTVMAR 166
Query: 188 LLARPNVKLFNAVAAEDLIVK-GN----RVGGIVTNWALVSMNHDSQSCMDPNVMEAKVV 242
LA PNVKLFNA A EDLIVK G R+ G+VTNW LVS+NH QSCMDPN + A +V
Sbjct: 167 TLALPNVKLFNATAVEDLIVKEGKDGKQRIAGVVTNWTLVSLNHGLQSCMDPNTINAHLV 226
Query: 243 VSSCGHDGPFGATGVRGMKALDM 265
VS+ GHDGPFGA V+ + + +
Sbjct: 227 VSATGHDGPFGAFCVKRLASAQL 249
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 74/134 (55%), Positives = 90/134 (67%)
Query: 211 RVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGA------------TGVR 258
R+ G+VTNW LVS+NH QSCMDPN + A +VVS+ GHDGPFGA + +
Sbjct: 195 RIAGVVTNWTLVSLNHGLQSCMDPNTINAHLVVSATGHDGPFGAFCVKRLASAQLVSNLH 254
Query: 259 GMKALDMNTAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLAL 318
M+ LDMN AED IVK TRE+ PGMIV GME++E DGA RMGPTFG MM SG KAA AL
Sbjct: 255 DMRPLDMNRAEDLIVKGTREVFPGMIVGGMELSEFDGANRMGPTFGGMMFSGIKAAQEAL 314
Query: 319 KSLGQPNAMDGTYV 332
+ A++ Y+
Sbjct: 315 AIFDERKAVNEKYL 328
>UNIPROTKB|G4NKA9 [details] [associations]
symbol:MGG_03098 "Thiazole biosynthetic enzyme"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR002922 EMBL:CM001237 KO:K03146
PANTHER:PTHR10617:SF54 TIGRFAMs:TIGR00292 RefSeq:XP_003720575.1
ProteinModelPortal:G4NKA9 SMR:G4NKA9 EnsemblFungi:MGG_03098T0
GeneID:2682651 KEGG:mgr:MGG_03098 Uniprot:G4NKA9
Length = 327
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 101/230 (43%), Positives = 135/230 (58%)
Query: 50 IKYSSSSRKNDMXXXXXXXXXXXXXDLDAFKFDAIKESIVSRETTRRYMTDMITHADTDX 109
+K D D + F F I+ES VSR T RY D+ HA+TD
Sbjct: 19 VKNGKHQHNADSAAAAAAKLHDLATDWNQFSFSPIRESQVSRAMTSRYFADLHAHAETDV 78
Query: 110 XXXGAGSAGLSCAYEISK-NPNVQVAIIEQXXX--------XXXXXXXXXRKPAHLFLDE 160
GAGS GLS A+ ++ P++++ ++E RKPAHLFLD
Sbjct: 79 VIVGAGSCGLSAAFHLATARPDLRITLVEAGVAPGGGAWLGGQLFSAMVMRKPAHLFLDR 138
Query: 161 LGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-------GNRVG 213
LG+ Y+++ ++VV+KHAALFTST++SK+LA NVKLFNA A EDLI + G RV
Sbjct: 139 LGVAYEDEGSFVVVKHAALFTSTLLSKVLALDNVKLFNATAVEDLITRREGGDNAGVRVA 198
Query: 214 GIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKAL 263
G+VTNW LVSM+HD QSCMDPN + A VV+S+ GHDGPFGA + + ++
Sbjct: 199 GVVTNWTLVSMHHDDQSCMDPNTINAPVVISTTGHDGPFGAFSAKRLVSM 248
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 76/122 (62%), Positives = 91/122 (74%)
Query: 209 GNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVR---------- 258
G RV G+VTNW LVSM+HD QSCMDPN + A VV+S+ GHDGPFGA +
Sbjct: 194 GVRVAGVVTNWTLVSMHHDDQSCMDPNTINAPVVISTTGHDGPFGAFSAKRLVSMKQIEQ 253
Query: 259 --GMKALDMNTAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHL 316
GM+ LDM +AEDAIVK TREIVPG+I+ GME++EIDGA RMGPTFGAM++SG KAA
Sbjct: 254 LGGMRGLDMQSAEDAIVKRTREIVPGLIIGGMELSEIDGANRMGPTFGAMVLSGVKAAEE 313
Query: 317 AL 318
A+
Sbjct: 314 AM 315
>ASPGD|ASPL0000018231 [details] [associations]
symbol:thiF species:162425 "Emericella nidulans"
[GO:0009228 "thiamine biosynthetic process" evidence=IEA]
[GO:0000002 "mitochondrial genome maintenance" evidence=IEA]
[GO:0052837 "thiazole biosynthetic process" evidence=IEA]
[GO:0008198 "ferrous iron binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR002922 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
EMBL:BN001302 GO:GO:0009228 EMBL:AACD01000064 HOGENOM:HOG000106048
KO:K03146 OMA:CMDPNTI HAMAP:MF_03158 PANTHER:PTHR10617:SF54
TIGRFAMs:TIGR00292 RefSeq:XP_661532.1 ProteinModelPortal:G5EAZ2
SMR:G5EAZ2 STRING:Q76B84 GeneID:2873351 KEGG:ani:AN3928.2
Uniprot:G5EAZ2
Length = 331
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 99/213 (46%), Positives = 136/213 (63%)
Query: 77 DAFKFDAIKESIVSRETTRRYMTDMITHADTDXXXXGAGSAGLSCAYEISK-NPNVQVAI 135
D FKF I+ES VSR TRRY D+ +A++D GAGS GLS AY ++K P++++AI
Sbjct: 46 DNFKFAPIRESQVSRAMTRRYFQDLDRYAESDVVIVGAGSCGLSTAYVLAKARPDLKIAI 105
Query: 136 IEQXXX--------XXXXXXXXXRKPAHLFLDELGIDYDEQD---NYVVIKHAALFTSTI 184
IE R+PA LFL+ELG+ Y+E NYVV+KHA+LFTST+
Sbjct: 106 IEASVSPGGGAWLGGQLFSAMVMRRPAELFLNELGVPYEEDPDMPNYVVVKHASLFTSTL 165
Query: 185 MSKLLARPNVKLFNAVAAEDLIVK----GN----RVGGIVTNWALVSMNHDSQSCMDPNV 236
+SK+L+ PNVKLFNA EDL+ + GN ++ G+VTNW LV+++HD SCMDPN
Sbjct: 166 LSKVLSFPNVKLFNATCVEDLVTRPGPNGNAQEVQIAGVVTNWTLVTLHHDDHSCMDPNT 225
Query: 237 MEAKVVVSSCGHDGPFGATGVRGMKALDMNTAE 269
+ A V++S+ GHDGPFGA + + + M T +
Sbjct: 226 INAPVIISTTGHDGPFGAFSAK--RLVSMTTID 256
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 76/153 (49%), Positives = 100/153 (65%)
Query: 179 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVME 238
LF +T + L+ RP N A E ++ G+VTNW LV+++HD SCMDPN +
Sbjct: 177 LFNATCVEDLVTRPGP---NGNAQEV------QIAGVVTNWTLVTLHHDDHSCMDPNTIN 227
Query: 239 AKVVVSSCGHDGPFGATGVR------------GMKALDMNTAEDAIVKLTREIVPGMIVA 286
A V++S+ GHDGPFGA + GM+ LDMN+AEDAIVK TRE+ G+I+
Sbjct: 228 APVIISTTGHDGPFGAFSAKRLVSMTTIDKLGGMRGLDMNSAEDAIVKNTREVAKGLIIG 287
Query: 287 GMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 319
GME++EIDG RMGPTFGAM++SG KAA AL+
Sbjct: 288 GMELSEIDGFNRMGPTFGAMVLSGVKAAEEALR 320
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.378 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 352 293 0.00091 115 3 11 22 0.40 34
33 0.44 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 6
No. of states in DFA: 606 (64 KB)
Total size of DFA: 192 KB (2109 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.17u 0.17s 20.34t Elapsed: 00:00:01
Total cpu time: 20.17u 0.17s 20.34t Elapsed: 00:00:01
Start: Sat May 11 08:39:04 2013 End: Sat May 11 08:39:05 2013