Query 039605
Match_columns 352
No_of_seqs 448 out of 3217
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 19:33:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039605.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039605hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jsk_A Cypbp37 protein; octame 100.0 7.8E-37 2.7E-41 287.4 17.1 251 75-325 46-338 (344)
2 2gjc_A Thiazole biosynthetic e 100.0 3.5E-33 1.2E-37 261.1 20.8 260 63-322 22-325 (326)
3 1rp0_A ARA6, thiazole biosynth 100.0 2E-31 6.7E-36 246.5 22.6 259 72-330 5-283 (284)
4 3fpz_A Thiazole biosynthetic e 100.0 8.3E-27 2.8E-31 219.3 23.3 261 61-322 20-325 (326)
5 2cul_A Glucose-inhibited divis 99.8 8.3E-18 2.8E-22 150.3 17.8 183 106-322 3-232 (232)
6 4fk1_A Putative thioredoxin re 99.7 2.7E-17 9.3E-22 152.5 12.9 114 104-250 4-117 (304)
7 4a5l_A Thioredoxin reductase; 99.7 3E-16 1E-20 145.4 12.9 117 186-322 195-312 (314)
8 3oz2_A Digeranylgeranylglycero 99.7 1.8E-15 6.1E-20 144.0 18.3 129 106-250 4-162 (397)
9 2ywl_A Thioredoxin reductase r 99.7 1.1E-15 3.8E-20 130.6 13.0 172 107-324 2-173 (180)
10 4gcm_A TRXR, thioredoxin reduc 99.6 1.8E-15 6.1E-20 140.5 14.6 116 190-323 192-307 (312)
11 3itj_A Thioredoxin reductase 1 99.6 7.1E-15 2.4E-19 137.2 13.5 123 183-324 213-337 (338)
12 3lxd_A FAD-dependent pyridine 99.6 1.1E-14 3.7E-19 141.0 14.1 112 190-319 205-320 (415)
13 2i0z_A NAD(FAD)-utilizing dehy 99.6 2.1E-14 7.3E-19 140.4 14.1 132 103-250 23-191 (447)
14 3o0h_A Glutathione reductase; 99.6 2.8E-14 9.7E-19 140.9 13.7 115 182-320 236-351 (484)
15 3f8d_A Thioredoxin reductase ( 99.5 1.4E-14 4.7E-19 134.2 10.1 125 183-324 194-319 (323)
16 4dna_A Probable glutathione re 99.5 6.2E-14 2.1E-18 137.7 15.0 115 182-320 215-331 (463)
17 4at0_A 3-ketosteroid-delta4-5a 99.5 5E-14 1.7E-18 140.0 13.0 133 105-250 40-264 (510)
18 1y0p_A Fumarate reductase flav 99.5 1.2E-13 4E-18 139.3 15.6 135 105-251 125-318 (571)
19 3lzw_A Ferredoxin--NADP reduct 99.5 2.2E-13 7.6E-18 126.6 16.1 115 106-248 7-121 (332)
20 1qo8_A Flavocytochrome C3 fuma 99.5 6.4E-14 2.2E-18 141.1 13.3 136 104-251 119-313 (566)
21 3v76_A Flavoprotein; structura 99.5 7.3E-14 2.5E-18 135.4 12.8 128 105-250 26-187 (417)
22 3urh_A Dihydrolipoyl dehydroge 99.5 2.1E-13 7E-18 134.9 16.0 119 182-319 243-362 (491)
23 3dgh_A TRXR-1, thioredoxin red 99.5 2.1E-13 7E-18 134.6 14.5 122 182-320 231-352 (483)
24 3e1t_A Halogenase; flavoprotei 99.5 3.4E-13 1.2E-17 134.1 15.9 135 105-251 6-173 (512)
25 3cgv_A Geranylgeranyl reductas 99.5 3.3E-13 1.1E-17 128.9 14.5 131 106-250 4-162 (397)
26 2h88_A Succinate dehydrogenase 99.5 1.9E-13 6.6E-18 138.6 13.0 135 105-250 17-217 (621)
27 3nix_A Flavoprotein/dehydrogen 99.5 6E-13 2.1E-17 128.4 15.7 131 106-250 5-166 (421)
28 2gqf_A Hypothetical protein HI 99.5 3.7E-13 1.3E-17 129.8 13.4 127 106-250 4-168 (401)
29 2x3n_A Probable FAD-dependent 99.5 5.6E-13 1.9E-17 127.9 14.1 132 105-251 5-167 (399)
30 1trb_A Thioredoxin reductase; 99.5 1.7E-12 5.9E-17 120.3 17.0 168 107-326 146-318 (320)
31 3i3l_A Alkylhalidase CMLS; fla 99.4 6.7E-13 2.3E-17 134.1 14.2 134 104-250 21-188 (591)
32 1kf6_A Fumarate reductase flav 99.4 5.5E-13 1.9E-17 135.1 13.5 136 105-250 4-197 (602)
33 3dme_A Conserved exported prot 99.4 8.9E-13 3E-17 124.3 14.1 132 106-251 4-210 (369)
34 4b1b_A TRXR, thioredoxin reduc 99.4 4.9E-13 1.7E-17 133.5 12.9 118 180-320 265-384 (542)
35 1d4d_A Flavocytochrome C fumar 99.4 1.1E-12 3.9E-17 132.1 15.6 135 105-251 125-318 (572)
36 2wdq_A Succinate dehydrogenase 99.4 4.8E-13 1.6E-17 135.2 12.8 135 105-250 6-206 (588)
37 3fbs_A Oxidoreductase; structu 99.4 8.9E-13 3.1E-17 120.6 13.4 111 106-250 2-112 (297)
38 2bs2_A Quinol-fumarate reducta 99.4 4.8E-13 1.7E-17 136.6 12.6 135 105-250 4-220 (660)
39 3qfa_A Thioredoxin reductase 1 99.4 2E-12 6.8E-17 128.8 16.7 122 180-319 252-379 (519)
40 1chu_A Protein (L-aspartate ox 99.4 4.6E-13 1.6E-17 134.0 11.6 135 105-250 7-208 (540)
41 3atr_A Conserved archaeal prot 99.4 1.2E-12 4.2E-17 128.0 14.4 132 106-251 6-163 (453)
42 2qa1_A PGAE, polyketide oxygen 99.4 3.4E-12 1.2E-16 126.5 16.9 134 104-251 9-166 (500)
43 2qa2_A CABE, polyketide oxygen 99.4 4.3E-12 1.5E-16 125.8 17.2 134 104-251 10-167 (499)
44 3dje_A Fructosyl amine: oxygen 99.4 3.5E-12 1.2E-16 123.9 15.3 132 105-252 5-223 (438)
45 3nlc_A Uncharacterized protein 99.4 1E-12 3.4E-17 131.3 11.4 130 105-250 106-277 (549)
46 3alj_A 2-methyl-3-hydroxypyrid 99.4 3.8E-12 1.3E-16 121.4 15.0 126 106-251 11-161 (379)
47 3rp8_A Flavoprotein monooxygen 99.4 4.9E-12 1.7E-16 121.7 15.7 129 104-251 21-182 (407)
48 3gyx_A Adenylylsulfate reducta 99.4 7E-13 2.4E-17 135.4 9.8 137 105-250 21-233 (662)
49 3ihg_A RDME; flavoenzyme, anth 99.4 4.4E-12 1.5E-16 126.6 15.5 132 105-250 4-183 (535)
50 1jnr_A Adenylylsulfate reducta 99.4 1.5E-12 5.2E-17 132.9 12.3 137 105-251 21-219 (643)
51 3r9u_A Thioredoxin reductase; 99.4 6.5E-12 2.2E-16 115.8 15.4 164 107-323 148-313 (315)
52 2e5v_A L-aspartate oxidase; ar 99.4 4.4E-12 1.5E-16 124.8 14.0 126 108-250 1-176 (472)
53 3fg2_P Putative rubredoxin red 99.4 3.2E-12 1.1E-16 123.1 12.6 164 107-319 143-309 (404)
54 1k0i_A P-hydroxybenzoate hydro 99.4 3E-12 1E-16 122.5 12.3 133 106-252 2-165 (394)
55 2vou_A 2,6-dihydroxypyridine h 99.4 1.4E-11 4.6E-16 118.3 16.9 128 105-251 4-154 (397)
56 1fl2_A Alkyl hydroperoxide red 99.4 1.3E-11 4.3E-16 114.0 15.6 162 107-324 145-307 (310)
57 3ab1_A Ferredoxin--NADP reduct 99.4 1.1E-11 3.7E-16 117.1 15.2 169 107-326 164-332 (360)
58 3cty_A Thioredoxin reductase; 99.3 1E-11 3.4E-16 115.3 14.4 162 107-324 156-318 (319)
59 4a9w_A Monooxygenase; baeyer-v 99.3 1.3E-12 4.4E-17 122.5 8.3 135 106-259 3-141 (357)
60 2zxi_A TRNA uridine 5-carboxym 99.3 1.1E-11 3.9E-16 124.7 15.5 129 106-250 27-180 (637)
61 2q0l_A TRXR, thioredoxin reduc 99.3 2.6E-11 8.8E-16 112.0 16.8 166 106-323 143-310 (311)
62 3ces_A MNMG, tRNA uridine 5-ca 99.3 1.2E-11 4.3E-16 124.8 15.5 131 105-251 27-182 (651)
63 2bry_A NEDD9 interacting prote 99.3 4.9E-12 1.7E-16 125.3 12.2 137 104-252 90-232 (497)
64 2zbw_A Thioredoxin reductase; 99.3 2.6E-11 8.9E-16 113.1 16.2 169 107-326 153-321 (335)
65 1vdc_A NTR, NADPH dependent th 99.3 2.3E-11 8E-16 113.4 15.6 164 107-326 160-327 (333)
66 3nyc_A D-arginine dehydrogenas 99.3 5.2E-12 1.8E-16 119.7 11.2 127 105-250 8-209 (381)
67 3fmw_A Oxygenase; mithramycin, 99.3 4.7E-12 1.6E-16 127.4 11.3 132 105-250 48-207 (570)
68 1y56_B Sarcosine oxidase; dehy 99.3 1.2E-11 4.1E-16 117.7 13.5 128 106-250 5-205 (382)
69 3da1_A Glycerol-3-phosphate de 99.3 9.2E-12 3.2E-16 125.1 13.2 135 105-250 17-232 (561)
70 2v3a_A Rubredoxin reductase; a 99.3 1.9E-11 6.4E-16 117.0 14.7 160 107-319 146-305 (384)
71 2q7v_A Thioredoxin reductase; 99.3 2.6E-11 8.9E-16 112.8 15.2 166 107-329 153-319 (325)
72 3ic9_A Dihydrolipoamide dehydr 99.3 6.4E-11 2.2E-15 117.1 18.8 165 106-322 174-340 (492)
73 3cp8_A TRNA uridine 5-carboxym 99.3 2.7E-11 9.3E-16 122.2 16.2 130 105-250 20-174 (641)
74 2pyx_A Tryptophan halogenase; 99.3 4.4E-11 1.5E-15 119.2 17.1 63 175-252 172-235 (526)
75 2xdo_A TETX2 protein; tetracyc 99.3 2.3E-11 7.7E-16 116.8 14.1 132 101-251 21-183 (398)
76 2r0c_A REBC; flavin adenine di 99.3 3.2E-11 1.1E-15 120.8 15.7 136 101-251 21-197 (549)
77 3c96_A Flavin-containing monoo 99.3 2.8E-11 9.7E-16 116.6 14.7 134 106-251 4-170 (410)
78 3cgb_A Pyridine nucleotide-dis 99.3 2.5E-11 8.5E-16 119.6 14.5 163 106-319 186-352 (480)
79 2gag_B Heterotetrameric sarcos 99.3 2.1E-11 7.1E-16 116.7 13.5 57 178-250 174-230 (405)
80 1q1r_A Putidaredoxin reductase 99.3 9.7E-12 3.3E-16 120.9 11.1 164 107-319 150-318 (431)
81 3ps9_A TRNA 5-methylaminomethy 99.3 4.8E-11 1.6E-15 122.5 16.2 129 106-251 272-474 (676)
82 2eq6_A Pyruvate dehydrogenase 99.3 4.3E-11 1.5E-15 117.4 15.1 162 107-319 170-333 (464)
83 1hyu_A AHPF, alkyl hydroperoxi 99.3 2.9E-11 9.9E-16 120.4 14.0 162 107-324 356-518 (521)
84 1v59_A Dihydrolipoamide dehydr 99.3 1.5E-10 5.2E-15 113.8 18.8 164 107-319 184-349 (478)
85 1ebd_A E3BD, dihydrolipoamide 99.3 8.3E-11 2.8E-15 115.0 16.6 162 106-319 170-332 (455)
86 3ef6_A Toluene 1,2-dioxygenase 99.3 6.5E-12 2.2E-16 121.3 8.5 164 107-320 144-309 (410)
87 1nhp_A NADH peroxidase; oxidor 99.3 2.7E-11 9.1E-16 118.3 12.6 163 106-319 149-315 (447)
88 1ges_A Glutathione reductase; 99.3 3.4E-11 1.2E-15 117.7 13.3 159 107-319 168-327 (450)
89 3ab1_A Ferredoxin--NADP reduct 99.3 3.5E-11 1.2E-15 113.6 13.0 118 106-250 14-131 (360)
90 2aqj_A Tryptophan halogenase, 99.3 6.3E-11 2.2E-15 118.4 15.4 130 106-252 5-224 (538)
91 2yqu_A 2-oxoglutarate dehydrog 99.3 7.7E-11 2.6E-15 115.2 15.6 158 107-319 168-326 (455)
92 3pvc_A TRNA 5-methylaminomethy 99.3 9E-11 3.1E-15 120.7 16.5 130 105-251 263-470 (689)
93 2gmh_A Electron transfer flavo 99.2 7.7E-11 2.6E-15 118.9 15.5 138 106-250 35-217 (584)
94 2gqw_A Ferredoxin reductase; f 99.2 3.2E-11 1.1E-15 116.4 12.0 160 107-320 146-308 (408)
95 1ryi_A Glycine oxidase; flavop 99.2 3E-11 1E-15 114.8 11.6 130 104-251 15-220 (382)
96 2oln_A NIKD protein; flavoprot 99.2 3.1E-11 1E-15 115.6 11.6 127 106-250 4-208 (397)
97 2gv8_A Monooxygenase; FMO, FAD 99.2 5E-11 1.7E-15 116.3 13.2 142 105-260 5-187 (447)
98 2weu_A Tryptophan 5-halogenase 99.2 6.9E-11 2.4E-15 117.2 14.4 63 174-252 169-232 (511)
99 2cdu_A NADPH oxidase; flavoenz 99.2 5.8E-11 2E-15 116.0 13.5 163 107-319 150-316 (452)
100 2e4g_A Tryptophan halogenase; 99.2 1.2E-10 4E-15 116.8 16.0 62 176-252 192-254 (550)
101 2r9z_A Glutathione amide reduc 99.2 1.2E-10 4.1E-15 114.2 15.1 158 107-319 167-326 (463)
102 4eqs_A Coenzyme A disulfide re 99.2 5.6E-11 1.9E-15 115.8 12.6 159 107-319 148-310 (437)
103 3gwf_A Cyclohexanone monooxyge 99.2 6.5E-11 2.2E-15 118.4 13.3 132 106-260 8-157 (540)
104 3ntd_A FAD-dependent pyridine 99.2 1.3E-10 4.4E-15 116.6 15.4 163 107-319 152-337 (565)
105 2zbw_A Thioredoxin reductase; 99.2 7.3E-11 2.5E-15 110.1 12.7 116 106-249 5-120 (335)
106 1xdi_A RV3303C-LPDA; reductase 99.2 2.1E-10 7.3E-15 113.4 16.5 158 107-319 183-341 (499)
107 3k7m_X 6-hydroxy-L-nicotine ox 99.2 2.5E-11 8.4E-16 117.4 9.4 38 107-145 2-39 (431)
108 3uox_A Otemo; baeyer-villiger 99.2 3.7E-11 1.3E-15 120.3 10.9 137 105-260 8-157 (545)
109 2dkh_A 3-hydroxybenzoate hydro 99.2 1.5E-10 5.2E-15 118.0 15.5 139 106-251 32-212 (639)
110 3oc4_A Oxidoreductase, pyridin 99.2 3.1E-10 1E-14 110.9 17.1 162 107-319 148-313 (452)
111 1onf_A GR, grase, glutathione 99.2 3.2E-10 1.1E-14 112.3 17.3 166 107-319 177-370 (500)
112 2qcu_A Aerobic glycerol-3-phos 99.2 1.6E-10 5.6E-15 114.4 14.6 134 106-251 3-211 (501)
113 1ojt_A Surface protein; redox- 99.2 1.2E-10 4.3E-15 114.7 13.6 163 106-319 185-348 (482)
114 2hqm_A GR, grase, glutathione 99.2 2E-10 6.9E-15 113.1 15.0 159 107-319 186-346 (479)
115 4dgk_A Phytoene dehydrogenase; 99.2 1.5E-10 5.2E-15 114.1 14.0 54 181-249 224-277 (501)
116 2a8x_A Dihydrolipoyl dehydroge 99.2 1.7E-10 5.9E-15 113.0 14.3 161 107-319 172-333 (464)
117 3h28_A Sulfide-quinone reducta 99.2 5.5E-11 1.9E-15 115.4 10.6 126 183-326 205-337 (430)
118 1zmd_A Dihydrolipoyl dehydroge 99.2 1.9E-10 6.4E-15 113.1 14.4 165 107-319 179-344 (474)
119 2bc0_A NADH oxidase; flavoprot 99.2 1.7E-10 5.8E-15 114.0 13.9 162 107-319 195-360 (490)
120 3dk9_A Grase, GR, glutathione 99.2 5.3E-10 1.8E-14 109.9 17.2 165 107-320 188-356 (478)
121 1dxl_A Dihydrolipoamide dehydr 99.2 2.5E-10 8.6E-15 111.9 14.8 163 107-319 178-341 (470)
122 2gf3_A MSOX, monomeric sarcosi 99.2 2.1E-10 7.1E-15 109.1 13.7 127 106-250 3-205 (389)
123 2uzz_A N-methyl-L-tryptophan o 99.2 8.7E-11 3E-15 111.2 11.0 128 106-251 2-205 (372)
124 2a87_A TRXR, TR, thioredoxin r 99.2 1.9E-10 6.6E-15 107.5 13.2 161 106-323 155-317 (335)
125 3dgz_A Thioredoxin reductase 2 99.2 4.1E-10 1.4E-14 111.1 16.1 165 107-320 186-352 (488)
126 3lad_A Dihydrolipoamide dehydr 99.2 1.1E-09 3.8E-14 107.5 19.1 163 106-320 180-343 (476)
127 3iwa_A FAD-dependent pyridine 99.2 1.1E-10 3.7E-15 114.7 11.7 166 106-319 159-328 (472)
128 3ka7_A Oxidoreductase; structu 99.2 3.7E-10 1.3E-14 108.9 15.2 38 107-145 1-38 (425)
129 2qae_A Lipoamide, dihydrolipoy 99.2 5E-10 1.7E-14 109.8 16.1 164 107-319 175-339 (468)
130 3vrd_B FCCB subunit, flavocyto 99.2 6.6E-11 2.3E-15 113.5 9.6 119 190-331 213-333 (401)
131 3ics_A Coenzyme A-disulfide re 99.2 1.9E-10 6.5E-15 116.1 13.4 161 107-319 188-352 (588)
132 1mo9_A ORF3; nucleotide bindin 99.2 1.7E-10 5.9E-15 114.9 12.9 159 107-319 215-377 (523)
133 1fec_A Trypanothione reductase 99.2 3.7E-10 1.3E-14 111.6 15.0 160 107-319 188-350 (490)
134 2wpf_A Trypanothione reductase 99.2 3.7E-10 1.3E-14 111.7 14.8 160 107-319 192-354 (495)
135 1w4x_A Phenylacetone monooxyge 99.2 3.2E-10 1.1E-14 113.4 14.4 133 105-259 15-163 (542)
136 1yvv_A Amine oxidase, flavin-c 99.2 2.4E-10 8.1E-15 106.5 12.6 126 106-250 2-162 (336)
137 1y56_A Hypothetical protein PH 99.1 1.1E-10 3.9E-15 115.4 10.7 107 191-321 269-376 (493)
138 4ap3_A Steroid monooxygenase; 99.1 1.8E-10 6.1E-15 115.4 12.2 133 105-260 20-169 (549)
139 3k30_A Histamine dehydrogenase 99.1 1E-11 3.6E-16 127.7 3.3 106 184-325 573-678 (690)
140 1zk7_A HGII, reductase, mercur 99.1 9.3E-10 3.2E-14 107.9 17.0 156 107-319 177-333 (467)
141 3klj_A NAD(FAD)-dependent dehy 99.1 8.8E-11 3E-15 112.5 9.3 147 108-320 148-294 (385)
142 2rgh_A Alpha-glycerophosphate 99.1 6E-10 2.1E-14 112.1 15.2 63 178-250 188-250 (571)
143 1pj5_A N,N-dimethylglycine oxi 99.1 3.7E-10 1.3E-14 118.5 14.0 128 106-250 4-207 (830)
144 4hb9_A Similarities with proba 99.1 4.3E-10 1.5E-14 107.3 13.2 124 108-250 3-166 (412)
145 1xhc_A NADH oxidase /nitrite r 99.1 1.7E-10 5.8E-15 109.8 9.9 152 108-319 145-296 (367)
146 1m6i_A Programmed cell death p 99.1 5.8E-10 2E-14 110.2 14.1 164 107-320 181-352 (493)
147 1lvl_A Dihydrolipoamide dehydr 99.1 3.5E-10 1.2E-14 110.8 12.3 158 107-319 172-329 (458)
148 3kd9_A Coenzyme A disulfide re 99.1 2.6E-10 8.9E-15 111.3 11.2 162 107-319 149-314 (449)
149 2xve_A Flavin-containing monoo 99.1 4E-10 1.4E-14 110.6 12.5 142 107-260 3-176 (464)
150 3qj4_A Renalase; FAD/NAD(P)-bi 99.1 4.8E-10 1.6E-14 105.2 12.6 122 107-248 2-163 (342)
151 3axb_A Putative oxidoreductase 99.1 3.1E-10 1E-14 110.5 11.6 34 105-139 22-56 (448)
152 2q0l_A TRXR, thioredoxin reduc 99.1 6E-10 2E-14 102.7 12.9 112 107-250 2-114 (311)
153 3l8k_A Dihydrolipoyl dehydroge 99.1 1.3E-09 4.4E-14 106.9 15.3 159 107-320 173-333 (466)
154 2q7v_A Thioredoxin reductase; 99.1 3.4E-10 1.1E-14 105.2 10.5 114 106-250 8-123 (325)
155 3h8l_A NADH oxidase; membrane 99.1 3.1E-10 1.1E-14 109.2 9.5 117 180-324 220-338 (409)
156 1pn0_A Phenol 2-monooxygenase; 99.1 6.9E-10 2.4E-14 113.6 12.5 103 106-209 8-152 (665)
157 3d1c_A Flavin-containing putat 99.1 8.8E-10 3E-14 104.0 12.2 127 106-252 4-145 (369)
158 3sx6_A Sulfide-quinone reducta 99.0 6.7E-10 2.3E-14 108.0 11.1 129 187-328 216-350 (437)
159 3cty_A Thioredoxin reductase; 99.0 1.8E-09 6.3E-14 99.9 13.3 111 106-250 16-126 (319)
160 3c4n_A Uncharacterized protein 99.0 3.8E-10 1.3E-14 108.6 8.9 128 106-250 36-236 (405)
161 3s5w_A L-ornithine 5-monooxyge 99.0 3.5E-10 1.2E-14 110.5 8.7 130 105-249 29-191 (463)
162 3hyw_A Sulfide-quinone reducta 99.0 2.7E-10 9.1E-15 110.7 7.7 125 185-326 206-337 (430)
163 2vdc_G Glutamate synthase [NAD 99.0 3.1E-10 1.1E-14 111.1 7.6 173 106-323 264-445 (456)
164 1vdc_A NTR, NADPH dependent th 99.0 3.1E-10 1.1E-14 105.6 6.9 114 106-251 8-125 (333)
165 3qvp_A Glucose oxidase; oxidor 99.0 1.8E-09 6.3E-14 108.5 12.4 56 185-250 233-293 (583)
166 3dgz_A Thioredoxin reductase 2 99.0 7.3E-10 2.5E-14 109.3 9.4 129 105-250 5-159 (488)
167 2x8g_A Thioredoxin glutathione 99.0 7.7E-09 2.6E-13 104.5 16.5 162 108-320 288-459 (598)
168 3nrn_A Uncharacterized protein 99.0 3.3E-09 1.1E-13 102.3 12.7 37 108-145 2-38 (421)
169 2a87_A TRXR, TR, thioredoxin r 99.0 1.3E-09 4.4E-14 101.9 9.1 113 105-250 13-126 (335)
170 1fl2_A Alkyl hydroperoxide red 99.0 1.9E-09 6.6E-14 99.2 10.1 113 106-250 1-115 (310)
171 1dxl_A Dihydrolipoamide dehydr 99.0 4.5E-10 1.5E-14 110.2 6.1 128 106-251 6-152 (470)
172 3r9u_A Thioredoxin reductase; 99.0 1.8E-09 6.2E-14 99.3 9.8 111 106-249 4-117 (315)
173 3l8k_A Dihydrolipoyl dehydroge 99.0 6.2E-10 2.1E-14 109.2 6.9 41 106-147 4-44 (466)
174 2qae_A Lipoamide, dihydrolipoy 98.9 5.7E-10 1.9E-14 109.4 5.7 127 106-250 2-148 (468)
175 1trb_A Thioredoxin reductase; 98.9 2.1E-09 7.1E-14 99.4 9.2 112 106-250 5-116 (320)
176 1gte_A Dihydropyrimidine dehyd 98.9 3.5E-09 1.2E-13 113.4 11.6 167 108-322 334-508 (1025)
177 3kkj_A Amine oxidase, flavin-c 98.9 6.7E-10 2.3E-14 98.1 5.1 39 106-145 2-40 (336)
178 3i6d_A Protoporphyrinogen oxid 98.9 5.8E-09 2E-13 101.5 11.7 39 106-145 5-49 (470)
179 3t37_A Probable dehydrogenase; 98.9 4.4E-09 1.5E-13 104.4 11.0 53 186-249 218-270 (526)
180 1v59_A Dihydrolipoamide dehydr 98.9 5.2E-10 1.8E-14 110.0 4.1 40 106-146 5-44 (478)
181 1cjc_A Protein (adrenodoxin re 98.9 2.3E-08 7.9E-13 97.9 15.5 119 192-324 270-397 (460)
182 1zmd_A Dihydrolipoyl dehydroge 98.9 9.9E-10 3.4E-14 107.9 5.6 40 106-146 6-45 (474)
183 3q9t_A Choline dehydrogenase a 98.9 2.5E-09 8.5E-14 107.5 8.5 51 190-250 217-270 (577)
184 1hyu_A AHPF, alkyl hydroperoxi 98.9 5.2E-09 1.8E-13 104.1 10.7 116 103-250 209-326 (521)
185 1ojt_A Surface protein; redox- 98.9 2.1E-09 7E-14 105.9 7.6 138 106-251 6-161 (482)
186 2eq6_A Pyruvate dehydrogenase 98.9 1E-09 3.5E-14 107.6 5.1 38 106-145 6-43 (464)
187 4gde_A UDP-galactopyranose mut 98.9 3.2E-09 1.1E-13 104.7 8.5 40 105-145 9-49 (513)
188 3lad_A Dihydrolipoamide dehydr 98.9 1.1E-09 3.9E-14 107.5 4.3 38 106-144 3-40 (476)
189 2a8x_A Dihydrolipoyl dehydroge 98.8 1.2E-09 4.2E-14 106.9 4.1 38 106-145 3-40 (464)
190 1ebd_A E3BD, dihydrolipoamide 98.8 4E-09 1.4E-13 103.0 7.7 125 106-250 3-145 (455)
191 2ivd_A PPO, PPOX, protoporphyr 98.8 1.8E-08 6.3E-13 98.5 12.3 44 101-145 11-54 (478)
192 4g6h_A Rotenone-insensitive NA 98.8 9E-09 3.1E-13 101.9 9.9 165 108-320 219-399 (502)
193 1lvl_A Dihydrolipoamide dehydr 98.8 5.6E-09 1.9E-13 102.1 8.2 39 106-146 5-43 (458)
194 3nks_A Protoporphyrinogen oxid 98.8 1.1E-08 3.7E-13 100.0 10.1 38 107-145 3-42 (477)
195 4a9w_A Monooxygenase; baeyer-v 98.8 1.2E-08 4E-13 95.2 9.1 181 106-323 163-353 (357)
196 3d1c_A Flavin-containing putat 98.8 1.1E-07 3.6E-12 89.6 15.6 173 107-325 167-342 (369)
197 3pl8_A Pyranose 2-oxidase; sub 98.8 1.1E-08 3.8E-13 103.8 8.9 40 105-145 45-84 (623)
198 1mo9_A ORF3; nucleotide bindin 98.8 8.7E-09 3E-13 102.5 8.0 41 105-146 42-82 (523)
199 2hqm_A GR, grase, glutathione 98.8 3.5E-09 1.2E-13 104.2 4.9 40 105-146 10-49 (479)
200 2yqu_A 2-oxoglutarate dehydrog 98.8 2.8E-09 9.7E-14 104.1 4.2 40 106-146 1-40 (455)
201 2vvm_A Monoamine oxidase N; FA 98.8 8.4E-08 2.9E-12 94.4 14.6 39 106-145 39-77 (495)
202 1s3e_A Amine oxidase [flavin-c 98.8 5.1E-08 1.7E-12 96.7 13.1 39 106-145 4-42 (520)
203 2gag_A Heterotetrameric sarcos 98.7 5.1E-08 1.7E-12 103.7 13.2 124 106-249 128-252 (965)
204 2gag_A Heterotetrameric sarcos 98.7 2.7E-08 9.4E-13 105.8 10.9 155 107-323 285-445 (965)
205 1zk7_A HGII, reductase, mercur 98.7 2.5E-08 8.5E-13 97.7 9.8 39 106-146 4-42 (467)
206 3dk9_A Grase, GR, glutathione 98.7 4.4E-09 1.5E-13 103.4 4.3 40 105-146 19-58 (478)
207 1lqt_A FPRA; NADP+ derivative, 98.7 1E-07 3.5E-12 93.2 13.7 196 107-323 148-388 (456)
208 3p1w_A Rabgdi protein; GDI RAB 98.7 5.1E-08 1.8E-12 95.5 11.1 40 105-145 19-58 (475)
209 1fec_A Trypanothione reductase 98.7 9.5E-09 3.3E-13 101.4 6.0 40 106-146 3-51 (490)
210 3lov_A Protoporphyrinogen oxid 98.7 1.5E-07 5.2E-12 92.0 14.4 39 106-145 4-44 (475)
211 3fim_B ARYL-alcohol oxidase; A 98.7 1.3E-08 4.5E-13 102.1 6.8 37 106-142 2-38 (566)
212 3c4a_A Probable tryptophan hyd 98.7 7.8E-09 2.7E-13 98.5 4.6 117 108-251 2-144 (381)
213 1onf_A GR, grase, glutathione 98.7 8.3E-09 2.8E-13 102.1 4.8 39 106-146 2-40 (500)
214 3iwa_A FAD-dependent pyridine 98.7 3E-08 1E-12 97.2 8.8 115 107-250 4-125 (472)
215 3oc4_A Oxidoreductase, pyridin 98.7 7.8E-08 2.7E-12 93.7 11.4 112 107-250 3-115 (452)
216 3ic9_A Dihydrolipoamide dehydr 98.7 4.8E-08 1.6E-12 96.4 9.3 39 106-146 8-46 (492)
217 2wpf_A Trypanothione reductase 98.7 8.5E-09 2.9E-13 101.9 3.9 40 106-146 7-55 (495)
218 1xdi_A RV3303C-LPDA; reductase 98.7 1.1E-08 3.9E-13 101.0 4.6 39 106-145 2-42 (499)
219 3kd9_A Coenzyme A disulfide re 98.7 3.4E-08 1.2E-12 96.2 7.7 111 106-250 3-114 (449)
220 2r9z_A Glutathione amide reduc 98.7 1.8E-08 6E-13 98.8 5.6 39 106-146 4-42 (463)
221 3klj_A NAD(FAD)-dependent dehy 98.6 1.5E-07 5.1E-12 90.0 11.6 109 105-250 8-116 (385)
222 1ges_A Glutathione reductase; 98.6 1.4E-08 4.7E-13 99.2 4.2 39 106-146 4-42 (450)
223 4b63_A L-ornithine N5 monooxyg 98.6 3.9E-08 1.3E-12 97.3 7.5 132 105-249 38-213 (501)
224 1ju2_A HydroxynitrIle lyase; f 98.6 1.9E-08 6.6E-13 100.3 5.1 35 105-141 25-59 (536)
225 2vdc_G Glutamate synthase [NAD 98.6 2.7E-08 9.1E-13 97.4 5.5 99 105-250 121-219 (456)
226 3s5w_A L-ornithine 5-monooxyge 98.6 1.8E-06 6E-11 84.1 18.4 174 106-292 227-421 (463)
227 2x8g_A Thioredoxin glutathione 98.6 9E-08 3.1E-12 96.6 9.2 35 104-139 105-139 (598)
228 1kdg_A CDH, cellobiose dehydro 98.6 7.8E-08 2.7E-12 96.1 8.5 59 183-250 200-261 (546)
229 3g5s_A Methylenetetrahydrofola 98.6 1.8E-07 6.3E-12 88.7 10.4 92 107-199 2-119 (443)
230 4gut_A Lysine-specific histone 98.6 1.6E-07 5.6E-12 97.4 11.0 39 105-144 335-373 (776)
231 3ihm_A Styrene monooxygenase A 98.6 4.7E-08 1.6E-12 94.8 6.3 35 105-140 21-55 (430)
232 1xhc_A NADH oxidase /nitrite r 98.6 1.3E-07 4.3E-12 89.8 9.1 106 106-250 8-113 (367)
233 3ics_A Coenzyme A-disulfide re 98.6 2.5E-08 8.4E-13 100.6 4.1 116 106-250 36-152 (588)
234 1q1r_A Putidaredoxin reductase 98.6 5.7E-08 2E-12 94.2 6.4 109 106-250 4-114 (431)
235 3cgb_A Pyridine nucleotide-dis 98.6 2.9E-07 1E-11 90.4 11.3 115 107-250 37-152 (480)
236 2bc0_A NADH oxidase; flavoprot 98.5 1.4E-07 4.7E-12 93.0 8.7 113 105-250 34-149 (490)
237 2gqw_A Ferredoxin reductase; f 98.5 2E-07 6.7E-12 89.7 8.8 106 105-250 6-113 (408)
238 3ef6_A Toluene 1,2-dioxygenase 98.5 1.6E-07 5.5E-12 90.4 7.3 107 107-250 3-111 (410)
239 2v3a_A Rubredoxin reductase; a 98.5 7.9E-08 2.7E-12 91.6 5.1 108 106-250 4-113 (384)
240 2jbv_A Choline oxidase; alcoho 98.5 3.3E-07 1.1E-11 91.5 9.8 56 185-249 215-272 (546)
241 1nhp_A NADH peroxidase; oxidor 98.5 4.3E-07 1.5E-11 88.3 10.1 113 108-250 2-115 (447)
242 3ntd_A FAD-dependent pyridine 98.5 3.7E-07 1.3E-11 91.3 9.5 114 108-250 3-117 (565)
243 1o94_A Tmadh, trimethylamine d 98.4 9.3E-08 3.2E-12 98.8 4.7 164 107-323 529-701 (729)
244 2cdu_A NADPH oxidase; flavoenz 98.4 4.9E-07 1.7E-11 88.0 9.2 114 107-250 1-117 (452)
245 3fg2_P Putative rubredoxin red 98.4 2.6E-07 8.9E-12 88.6 7.1 106 107-249 2-109 (404)
246 4eqs_A Coenzyme A disulfide re 98.4 4.5E-07 1.6E-11 88.0 8.9 113 108-250 2-116 (437)
247 1gpe_A Protein (glucose oxidas 98.4 6.8E-07 2.3E-11 90.1 10.1 53 188-250 240-297 (587)
248 1cjc_A Protein (adrenodoxin re 98.4 1.6E-07 5.5E-12 91.9 5.0 99 106-250 6-106 (460)
249 2bcg_G Secretory pathway GDP d 98.4 2.2E-07 7.4E-12 90.7 5.5 40 105-145 10-49 (453)
250 1ps9_A 2,4-dienoyl-COA reducta 98.4 2E-07 6.9E-12 95.4 5.4 39 106-145 373-411 (671)
251 1gte_A Dihydropyrimidine dehyd 98.4 2E-07 6.9E-12 99.8 5.6 99 106-249 187-286 (1025)
252 2b9w_A Putative aminooxidase; 98.3 4.1E-07 1.4E-11 87.5 5.9 40 105-145 5-45 (424)
253 1lqt_A FPRA; NADP+ derivative, 98.3 3.8E-07 1.3E-11 89.1 5.4 99 106-249 3-107 (456)
254 2jae_A L-amino acid oxidase; o 98.3 1E-06 3.4E-11 86.5 7.9 39 106-145 11-49 (489)
255 1o94_A Tmadh, trimethylamine d 98.3 3E-07 1E-11 95.1 4.3 40 105-145 388-427 (729)
256 2xve_A Flavin-containing monoo 98.3 7E-06 2.4E-10 80.2 13.3 140 107-321 198-340 (464)
257 1rsg_A FMS1 protein; FAD bindi 98.3 3.7E-07 1.3E-11 90.4 4.1 39 106-145 8-47 (516)
258 1v0j_A UDP-galactopyranose mut 98.2 6.1E-07 2.1E-11 86.1 4.9 40 106-145 7-46 (399)
259 2yg5_A Putrescine oxidase; oxi 98.2 5.4E-07 1.8E-11 87.4 4.0 39 106-145 5-43 (453)
260 1c0p_A D-amino acid oxidase; a 98.2 1.2E-06 4E-11 82.5 6.0 38 105-143 5-42 (363)
261 1m6i_A Programmed cell death p 98.2 1.1E-06 3.7E-11 86.7 5.5 124 106-250 11-144 (493)
262 1sez_A Protoporphyrinogen oxid 98.2 2.2E-06 7.5E-11 84.3 7.3 39 106-145 13-51 (504)
263 3hdq_A UDP-galactopyranose mut 98.2 1.2E-06 4.1E-11 84.0 5.1 40 105-145 28-67 (397)
264 1i8t_A UDP-galactopyranose mut 98.1 1.3E-06 4.6E-11 82.7 4.7 38 107-145 2-39 (367)
265 2e1m_A L-glutamate oxidase; L- 98.1 1.8E-06 6.3E-11 82.0 5.4 42 105-147 43-85 (376)
266 4dsg_A UDP-galactopyranose mut 98.1 2E-06 6.8E-11 84.6 5.5 41 104-145 7-48 (484)
267 2bi7_A UDP-galactopyranose mut 98.0 3.2E-06 1.1E-10 80.7 5.3 39 106-145 3-41 (384)
268 2gv8_A Monooxygenase; FMO, FAD 98.0 2.3E-05 7.9E-10 76.0 11.3 145 106-324 212-364 (447)
269 1d5t_A Guanine nucleotide diss 98.0 4.4E-06 1.5E-10 80.9 5.7 39 106-145 6-44 (433)
270 4g6h_A Rotenone-insensitive NA 98.0 2E-05 6.7E-10 77.9 9.2 122 106-250 42-169 (502)
271 2iid_A L-amino-acid oxidase; f 97.9 5.1E-06 1.7E-10 81.6 4.7 40 105-145 32-71 (498)
272 3g3e_A D-amino-acid oxidase; F 97.9 3.9E-06 1.3E-10 78.5 2.9 34 108-142 2-41 (351)
273 3lzw_A Ferredoxin--NADP reduct 97.8 7.6E-05 2.6E-09 68.5 10.6 164 107-325 155-318 (332)
274 1vg0_A RAB proteins geranylger 97.8 2.1E-05 7.3E-10 79.4 6.8 57 105-162 7-63 (650)
275 1b37_A Protein (polyamine oxid 97.8 1.4E-05 4.7E-10 78.1 5.0 39 106-145 4-43 (472)
276 1ps9_A 2,4-dienoyl-COA reducta 97.8 5.4E-05 1.9E-09 77.4 9.3 87 191-317 585-671 (671)
277 2z3y_A Lysine-specific histone 97.7 2.9E-05 1E-09 79.2 5.3 40 105-145 106-145 (662)
278 2xag_A Lysine-specific histone 97.6 4.1E-05 1.4E-09 80.1 5.6 39 106-145 278-316 (852)
279 1n4w_A CHOD, cholesterol oxida 97.5 6.4E-05 2.2E-09 74.2 4.9 36 105-141 4-39 (504)
280 1coy_A Cholesterol oxidase; ox 97.4 8.6E-05 2.9E-09 73.3 4.6 35 105-140 10-44 (507)
281 3fbs_A Oxidoreductase; structu 97.4 0.00053 1.8E-08 61.7 8.8 151 106-325 141-295 (297)
282 3gwf_A Cyclohexanone monooxyge 97.4 0.00042 1.5E-08 68.9 8.6 35 106-141 178-212 (540)
283 3uox_A Otemo; baeyer-villiger 97.1 0.0064 2.2E-07 60.4 14.0 34 107-141 186-219 (545)
284 3ayj_A Pro-enzyme of L-phenyla 97.1 0.00016 5.4E-09 74.0 2.0 36 106-142 56-100 (721)
285 4fk1_A Putative thioredoxin re 96.7 0.0026 8.8E-08 57.9 7.2 153 107-323 147-301 (304)
286 4ap3_A Steroid monooxygenase; 96.5 0.01 3.5E-07 59.0 10.0 34 107-141 192-225 (549)
287 1w4x_A Phenylacetone monooxyge 95.9 0.013 4.3E-07 58.1 7.1 34 107-141 187-220 (542)
288 4gcm_A TRXR, thioredoxin reduc 95.4 0.013 4.5E-07 53.2 4.8 35 107-142 146-180 (312)
289 3fwz_A Inner membrane protein 95.3 0.022 7.6E-07 45.5 5.1 33 107-140 8-40 (140)
290 3llv_A Exopolyphosphatase-rela 95.1 0.022 7.6E-07 45.3 4.6 32 108-140 8-39 (141)
291 2g1u_A Hypothetical protein TM 95.0 0.024 8.2E-07 46.1 4.6 33 107-140 20-52 (155)
292 4a5l_A Thioredoxin reductase; 94.7 0.028 9.5E-07 50.8 4.7 34 107-141 153-186 (314)
293 3urh_A Dihydrolipoyl dehydroge 94.7 0.028 9.5E-07 54.8 5.0 60 107-167 199-258 (491)
294 1lss_A TRK system potassium up 94.5 0.039 1.3E-06 43.4 4.6 32 108-140 6-37 (140)
295 1id1_A Putative potassium chan 94.5 0.048 1.6E-06 44.1 5.2 32 107-139 4-35 (153)
296 3lk7_A UDP-N-acetylmuramoylala 94.4 0.05 1.7E-06 52.5 6.1 50 107-165 10-59 (451)
297 2hmt_A YUAA protein; RCK, KTN, 94.0 0.049 1.7E-06 42.9 4.4 31 108-139 8-38 (144)
298 3lxd_A FAD-dependent pyridine 93.8 0.071 2.4E-06 50.6 5.8 60 107-167 153-213 (415)
299 3ic5_A Putative saccharopine d 93.7 0.063 2.2E-06 40.7 4.3 32 108-140 7-39 (118)
300 3qfa_A Thioredoxin reductase 1 93.4 0.091 3.1E-06 51.6 5.9 59 107-167 211-269 (519)
301 4dna_A Probable glutathione re 93.3 0.089 3.1E-06 50.7 5.6 62 106-168 170-231 (463)
302 3o0h_A Glutathione reductase; 93.2 0.093 3.2E-06 50.9 5.5 62 106-168 191-252 (484)
303 3dgh_A TRXR-1, thioredoxin red 92.7 0.14 4.8E-06 49.6 6.0 59 107-167 188-246 (483)
304 3dfz_A SIRC, precorrin-2 dehyd 92.7 0.1 3.5E-06 45.4 4.4 33 106-139 31-63 (223)
305 3l4b_C TRKA K+ channel protien 92.5 0.091 3.1E-06 45.2 4.0 32 108-140 2-33 (218)
306 1kyq_A Met8P, siroheme biosynt 92.2 0.091 3.1E-06 47.2 3.6 34 106-140 13-46 (274)
307 3ado_A Lambda-crystallin; L-gu 91.9 0.12 4.2E-06 47.4 4.1 32 108-140 8-39 (319)
308 4b63_A L-ornithine N5 monooxyg 91.8 0.82 2.8E-05 44.5 10.2 34 107-140 247-281 (501)
309 4dio_A NAD(P) transhydrogenase 91.7 0.15 5.1E-06 48.4 4.6 34 106-140 190-223 (405)
310 1n4w_A CHOD, cholesterol oxida 91.7 0.29 1E-05 47.8 6.9 58 185-249 228-287 (504)
311 2bcg_G Secretory pathway GDP d 91.6 0.32 1.1E-05 46.7 7.0 57 178-250 242-300 (453)
312 3itj_A Thioredoxin reductase 1 91.6 0.17 5.7E-06 45.9 4.7 36 106-142 173-208 (338)
313 2x5o_A UDP-N-acetylmuramoylala 91.5 0.14 4.6E-06 49.3 4.2 33 108-141 7-39 (439)
314 1pzg_A LDH, lactate dehydrogen 91.3 0.18 6.1E-06 46.6 4.7 33 107-140 10-43 (331)
315 4b1b_A TRXR, thioredoxin reduc 91.1 0.18 6.1E-06 49.9 4.7 60 107-168 224-283 (542)
316 1coy_A Cholesterol oxidase; ox 91.1 0.36 1.2E-05 47.2 6.9 58 185-249 233-292 (507)
317 3eag_A UDP-N-acetylmuramate:L- 90.7 0.35 1.2E-05 44.4 6.0 47 108-165 6-53 (326)
318 2a9f_A Putative malic enzyme ( 90.6 0.2 6.9E-06 47.2 4.3 35 105-140 187-222 (398)
319 3p2y_A Alanine dehydrogenase/p 90.5 0.18 6.1E-06 47.5 3.8 47 106-165 184-230 (381)
320 2dpo_A L-gulonate 3-dehydrogen 90.5 0.2 6.9E-06 46.0 4.1 32 108-140 8-39 (319)
321 1d5t_A Guanine nucleotide diss 90.5 0.25 8.6E-06 47.2 5.0 57 178-250 234-290 (433)
322 1jw9_B Molybdopterin biosynthe 90.4 0.2 6.8E-06 44.3 3.9 33 107-140 32-65 (249)
323 1pjc_A Protein (L-alanine dehy 90.1 0.26 8.8E-06 46.1 4.6 33 107-140 168-200 (361)
324 1x13_A NAD(P) transhydrogenase 90.1 0.24 8.3E-06 47.0 4.5 34 106-140 172-205 (401)
325 3i83_A 2-dehydropantoate 2-red 90.0 0.26 9E-06 45.0 4.5 32 108-140 4-35 (320)
326 4e12_A Diketoreductase; oxidor 90.0 0.27 9.1E-06 44.2 4.5 32 108-140 6-37 (283)
327 1f0y_A HCDH, L-3-hydroxyacyl-C 89.9 0.32 1.1E-05 44.0 5.0 32 108-140 17-48 (302)
328 3oj0_A Glutr, glutamyl-tRNA re 89.8 0.17 5.8E-06 40.3 2.7 34 106-140 21-54 (144)
329 4g65_A TRK system potassium up 89.8 0.18 6.1E-06 48.9 3.3 32 108-140 5-36 (461)
330 1l7d_A Nicotinamide nucleotide 89.7 0.29 9.7E-06 46.2 4.6 34 106-140 172-205 (384)
331 3f8d_A Thioredoxin reductase ( 89.4 0.27 9.4E-06 44.0 4.1 37 106-143 154-190 (323)
332 3c85_A Putative glutathione-re 89.4 0.31 1.1E-05 40.4 4.1 34 107-140 40-73 (183)
333 1vl6_A Malate oxidoreductase; 89.3 0.3 1E-05 46.0 4.3 35 105-140 191-226 (388)
334 3hn2_A 2-dehydropantoate 2-red 89.0 0.28 9.7E-06 44.6 3.9 32 108-140 4-35 (312)
335 3l9w_A Glutathione-regulated p 89.0 0.31 1.1E-05 46.5 4.3 32 108-140 6-37 (413)
336 4ffl_A PYLC; amino acid, biosy 89.0 0.36 1.2E-05 44.7 4.7 33 108-141 3-35 (363)
337 2eez_A Alanine dehydrogenase; 88.8 0.37 1.3E-05 45.1 4.6 33 107-140 167-199 (369)
338 1nyt_A Shikimate 5-dehydrogena 88.7 0.38 1.3E-05 42.9 4.5 32 107-139 120-151 (271)
339 1lld_A L-lactate dehydrogenase 88.7 0.37 1.3E-05 43.8 4.5 32 108-140 9-42 (319)
340 1ks9_A KPA reductase;, 2-dehyd 88.7 0.4 1.4E-05 42.6 4.6 32 108-140 2-33 (291)
341 2hjr_A Malate dehydrogenase; m 88.6 0.43 1.5E-05 44.0 4.8 33 107-140 15-48 (328)
342 3ghy_A Ketopantoate reductase 88.5 0.43 1.5E-05 43.9 4.8 31 108-139 5-35 (335)
343 3k30_A Histamine dehydrogenase 88.2 0.43 1.5E-05 48.5 5.0 60 107-167 524-586 (690)
344 2raf_A Putative dinucleotide-b 88.0 0.53 1.8E-05 40.2 4.7 33 107-140 20-52 (209)
345 3d0o_A L-LDH 1, L-lactate dehy 88.0 0.41 1.4E-05 43.8 4.3 33 106-139 6-40 (317)
346 2vhw_A Alanine dehydrogenase; 87.8 0.47 1.6E-05 44.6 4.6 34 106-140 168-201 (377)
347 3g17_A Similar to 2-dehydropan 87.5 0.38 1.3E-05 43.4 3.7 32 108-140 4-35 (294)
348 3tl2_A Malate dehydrogenase; c 87.5 0.62 2.1E-05 42.7 5.1 32 107-139 9-41 (315)
349 2ew2_A 2-dehydropantoate 2-red 87.5 0.49 1.7E-05 42.5 4.5 32 108-140 5-36 (316)
350 2v6b_A L-LDH, L-lactate dehydr 87.5 0.5 1.7E-05 43.0 4.5 32 108-140 2-35 (304)
351 3phh_A Shikimate dehydrogenase 87.4 0.54 1.9E-05 42.0 4.6 34 106-140 118-151 (269)
352 1zej_A HBD-9, 3-hydroxyacyl-CO 87.4 0.49 1.7E-05 42.9 4.3 34 105-140 11-44 (293)
353 3kkj_A Amine oxidase, flavin-c 87.3 0.49 1.7E-05 40.2 4.2 39 278-324 292-330 (336)
354 3ond_A Adenosylhomocysteinase; 87.2 0.45 1.5E-05 46.2 4.1 34 106-140 265-298 (488)
355 2aef_A Calcium-gated potassium 87.0 0.34 1.2E-05 41.9 3.0 31 108-140 11-41 (234)
356 1pjq_A CYSG, siroheme synthase 86.8 0.51 1.7E-05 45.6 4.3 32 107-139 13-44 (457)
357 2egg_A AROE, shikimate 5-dehyd 86.8 0.61 2.1E-05 42.2 4.6 32 107-139 142-174 (297)
358 1bg6_A N-(1-D-carboxylethyl)-L 86.7 0.58 2E-05 43.0 4.6 31 108-139 6-36 (359)
359 4huj_A Uncharacterized protein 86.7 0.41 1.4E-05 41.2 3.3 32 108-140 25-57 (220)
360 2y0c_A BCEC, UDP-glucose dehyd 86.7 0.56 1.9E-05 45.5 4.6 33 107-140 9-41 (478)
361 1z82_A Glycerol-3-phosphate de 86.6 0.6 2.1E-05 42.8 4.6 34 105-139 13-46 (335)
362 3k96_A Glycerol-3-phosphate de 86.5 0.76 2.6E-05 42.8 5.3 33 107-140 30-62 (356)
363 3gg2_A Sugar dehydrogenase, UD 86.3 0.61 2.1E-05 44.9 4.6 32 108-140 4-35 (450)
364 2ewd_A Lactate dehydrogenase,; 86.3 0.53 1.8E-05 42.9 4.0 32 108-140 6-38 (317)
365 1zcj_A Peroxisomal bifunctiona 86.3 0.61 2.1E-05 45.0 4.6 32 108-140 39-70 (463)
366 1p77_A Shikimate 5-dehydrogena 86.0 0.5 1.7E-05 42.2 3.6 32 107-139 120-151 (272)
367 3ego_A Probable 2-dehydropanto 86.0 0.71 2.4E-05 41.9 4.7 31 108-140 4-34 (307)
368 4ezb_A Uncharacterized conserv 85.7 0.9 3.1E-05 41.4 5.2 32 108-140 26-58 (317)
369 1t2d_A LDH-P, L-lactate dehydr 85.6 0.74 2.5E-05 42.2 4.6 32 108-140 6-38 (322)
370 3tnl_A Shikimate dehydrogenase 85.5 0.77 2.6E-05 42.0 4.6 33 106-139 154-187 (315)
371 3ggo_A Prephenate dehydrogenas 85.4 0.89 3E-05 41.5 5.0 33 107-140 34-68 (314)
372 3don_A Shikimate dehydrogenase 85.1 0.7 2.4E-05 41.5 4.1 33 107-140 118-151 (277)
373 1nvt_A Shikimate 5'-dehydrogen 85.1 0.76 2.6E-05 41.3 4.3 31 107-139 129-159 (287)
374 2vns_A Metalloreductase steap3 85.1 0.95 3.3E-05 38.7 4.8 32 108-140 30-61 (215)
375 3k6j_A Protein F01G10.3, confi 85.1 0.74 2.5E-05 44.4 4.5 33 108-141 56-88 (460)
376 1jay_A Coenzyme F420H2:NADP+ o 85.1 0.93 3.2E-05 38.3 4.7 32 108-140 2-34 (212)
377 3jyo_A Quinate/shikimate dehyd 85.0 0.81 2.8E-05 41.2 4.5 33 106-139 127-160 (283)
378 3gvi_A Malate dehydrogenase; N 84.9 0.92 3.2E-05 41.7 4.9 33 107-140 8-41 (324)
379 3p7m_A Malate dehydrogenase; p 84.9 0.97 3.3E-05 41.4 5.0 33 107-140 6-39 (321)
380 4a7p_A UDP-glucose dehydrogena 84.9 0.83 2.8E-05 43.9 4.7 35 106-141 8-42 (446)
381 1qo8_A Flavocytochrome C3 fuma 84.9 0.6 2.1E-05 46.2 3.9 49 274-322 515-564 (566)
382 1ur5_A Malate dehydrogenase; o 84.6 0.92 3.2E-05 41.3 4.7 32 108-140 4-36 (309)
383 3u62_A Shikimate dehydrogenase 84.5 0.95 3.2E-05 40.0 4.6 32 108-140 110-142 (253)
384 1zud_1 Adenylyltransferase THI 84.4 0.74 2.5E-05 40.6 3.9 34 106-140 28-62 (251)
385 1y6j_A L-lactate dehydrogenase 84.3 0.98 3.4E-05 41.3 4.8 33 107-140 8-42 (318)
386 3pef_A 6-phosphogluconate dehy 84.2 0.91 3.1E-05 40.6 4.5 32 108-140 3-34 (287)
387 3doj_A AT3G25530, dehydrogenas 84.0 0.9 3.1E-05 41.2 4.4 32 108-140 23-54 (310)
388 1ldn_A L-lactate dehydrogenase 84.0 0.94 3.2E-05 41.3 4.5 33 107-140 7-41 (316)
389 3hwr_A 2-dehydropantoate 2-red 84.0 0.88 3E-05 41.5 4.3 30 108-139 21-50 (318)
390 3dtt_A NADP oxidoreductase; st 83.9 1.1 3.7E-05 39.1 4.7 34 106-140 19-52 (245)
391 1lu9_A Methylene tetrahydromet 83.9 1 3.4E-05 40.3 4.6 32 107-139 120-152 (287)
392 3gvp_A Adenosylhomocysteinase 83.8 0.83 2.8E-05 43.6 4.1 34 106-140 220-253 (435)
393 3rui_A Ubiquitin-like modifier 83.8 1 3.5E-05 41.7 4.6 34 106-140 34-68 (340)
394 3d4o_A Dipicolinate synthase s 83.7 1 3.5E-05 40.5 4.6 34 106-140 155-188 (293)
395 3o8q_A Shikimate 5-dehydrogena 83.7 1.1 3.8E-05 40.2 4.8 33 106-139 126-159 (281)
396 2rir_A Dipicolinate synthase, 83.7 1 3.5E-05 40.6 4.6 33 106-139 157-189 (300)
397 3qha_A Putative oxidoreductase 83.6 0.91 3.1E-05 40.9 4.2 34 107-141 16-49 (296)
398 3t4e_A Quinate/shikimate dehyd 83.5 1.1 3.6E-05 41.0 4.6 33 106-139 148-181 (312)
399 1guz_A Malate dehydrogenase; o 83.5 1 3.6E-05 40.9 4.6 33 108-140 2-35 (310)
400 3orq_A N5-carboxyaminoimidazol 83.5 1.2 4.2E-05 41.5 5.1 34 107-141 13-46 (377)
401 3g0o_A 3-hydroxyisobutyrate de 83.4 1.1 3.6E-05 40.5 4.6 33 107-140 8-40 (303)
402 1mv8_A GMD, GDP-mannose 6-dehy 83.4 0.75 2.6E-05 44.0 3.7 32 108-140 2-33 (436)
403 1d4d_A Flavocytochrome C fumar 83.4 0.72 2.5E-05 45.8 3.7 45 278-322 525-570 (572)
404 1txg_A Glycerol-3-phosphate de 83.4 0.8 2.7E-05 41.7 3.8 30 108-138 2-31 (335)
405 3e8x_A Putative NAD-dependent 83.4 1.2 4E-05 38.2 4.7 33 107-140 22-55 (236)
406 4dll_A 2-hydroxy-3-oxopropiona 83.3 0.92 3.2E-05 41.4 4.1 33 107-140 32-64 (320)
407 3pwz_A Shikimate dehydrogenase 83.3 1.1 3.7E-05 40.1 4.5 33 106-139 120-153 (272)
408 4gx0_A TRKA domain protein; me 83.2 1.1 3.8E-05 44.2 5.0 34 107-141 349-382 (565)
409 3qsg_A NAD-binding phosphogluc 83.2 0.83 2.8E-05 41.5 3.8 32 107-139 25-57 (312)
410 1a5z_A L-lactate dehydrogenase 83.1 0.87 3E-05 41.6 3.9 32 108-140 2-35 (319)
411 3h8v_A Ubiquitin-like modifier 83.1 0.9 3.1E-05 41.1 3.9 34 106-140 36-70 (292)
412 3ce6_A Adenosylhomocysteinase; 83.1 0.9 3.1E-05 44.3 4.1 34 106-140 274-307 (494)
413 3ew7_A LMO0794 protein; Q8Y8U8 83.0 1.3 4.4E-05 37.2 4.7 32 108-140 2-34 (221)
414 4eez_A Alcohol dehydrogenase 1 82.8 1 3.6E-05 41.2 4.4 34 107-140 165-198 (348)
415 3fbt_A Chorismate mutase and s 82.6 0.96 3.3E-05 40.7 3.9 33 106-139 122-155 (282)
416 3dhn_A NAD-dependent epimerase 82.6 1.1 3.9E-05 37.9 4.3 32 108-140 6-38 (227)
417 3l6d_A Putative oxidoreductase 82.6 1.5 5.2E-05 39.6 5.3 33 107-140 10-42 (306)
418 2p4q_A 6-phosphogluconate dehy 82.4 1.3 4.6E-05 43.1 5.1 35 105-140 9-43 (497)
419 3gpi_A NAD-dependent epimerase 82.3 1.6 5.3E-05 38.6 5.2 32 108-140 5-36 (286)
420 3mog_A Probable 3-hydroxybutyr 82.3 1.1 3.8E-05 43.5 4.5 32 108-140 7-38 (483)
421 1hdo_A Biliverdin IX beta redu 82.3 1.4 4.7E-05 36.5 4.5 32 108-140 5-37 (206)
422 1y0p_A Fumarate reductase flav 82.2 0.66 2.3E-05 45.9 2.9 49 274-322 520-569 (571)
423 2hk9_A Shikimate dehydrogenase 82.2 1 3.5E-05 40.2 3.9 32 107-139 130-161 (275)
424 2dvm_A Malic enzyme, 439AA lon 82.2 1.4 4.8E-05 42.2 5.0 31 106-137 186-219 (439)
425 1evy_A Glycerol-3-phosphate de 82.0 0.87 3E-05 42.2 3.5 32 108-140 17-48 (366)
426 3pqe_A L-LDH, L-lactate dehydr 82.0 1.2 4.1E-05 40.9 4.4 32 107-139 6-39 (326)
427 3h2s_A Putative NADH-flavin re 82.0 1.4 4.8E-05 37.2 4.6 32 108-140 2-34 (224)
428 2f1k_A Prephenate dehydrogenas 81.8 1.3 4.4E-05 39.2 4.5 32 108-140 2-33 (279)
429 1kf6_A Fumarate reductase flav 81.8 0.98 3.4E-05 45.1 4.0 53 269-321 361-415 (602)
430 2uyy_A N-PAC protein; long-cha 81.8 1.7 5.9E-05 39.2 5.4 33 107-140 31-63 (316)
431 3ius_A Uncharacterized conserv 81.7 1.4 4.7E-05 38.9 4.6 32 108-140 7-38 (286)
432 2we8_A Xanthine dehydrogenase; 81.7 4.5 0.00015 38.0 8.3 85 106-191 204-295 (386)
433 2pv7_A T-protein [includes: ch 81.7 1.4 4.9E-05 39.6 4.7 32 108-140 23-55 (298)
434 1leh_A Leucine dehydrogenase; 81.6 1.3 4.4E-05 41.4 4.5 33 106-139 173-205 (364)
435 3q2o_A Phosphoribosylaminoimid 81.6 1.4 4.6E-05 41.3 4.7 33 107-140 15-47 (389)
436 1chu_A Protein (L-aspartate ox 81.6 1.1 3.7E-05 44.1 4.2 53 271-323 358-412 (540)
437 2qrj_A Saccharopine dehydrogen 81.5 1.2 4.1E-05 42.0 4.2 34 106-140 214-251 (394)
438 2e5v_A L-aspartate oxidase; ar 81.5 0.82 2.8E-05 44.2 3.2 54 267-320 316-371 (472)
439 3pdu_A 3-hydroxyisobutyrate de 81.5 0.89 3E-05 40.6 3.2 32 108-140 3-34 (287)
440 1hyh_A L-hicdh, L-2-hydroxyiso 81.4 1.1 3.7E-05 40.7 3.8 32 108-140 3-36 (309)
441 3c24_A Putative oxidoreductase 81.3 1.7 5.9E-05 38.7 5.1 32 108-140 13-45 (286)
442 2zyd_A 6-phosphogluconate dehy 81.2 1.5 5.1E-05 42.6 4.9 34 106-140 15-48 (480)
443 3vku_A L-LDH, L-lactate dehydr 81.2 1.3 4.5E-05 40.7 4.3 32 107-139 10-43 (326)
444 2i6t_A Ubiquitin-conjugating e 81.1 1.2 4E-05 40.6 3.9 33 107-140 15-49 (303)
445 3vtf_A UDP-glucose 6-dehydroge 81.0 1.3 4.4E-05 42.5 4.3 33 107-140 22-54 (444)
446 2d5c_A AROE, shikimate 5-dehyd 80.9 1.5 5.3E-05 38.6 4.6 31 108-139 118-148 (263)
447 1oju_A MDH, malate dehydrogena 80.9 1.2 4.1E-05 40.3 3.8 32 108-140 2-35 (294)
448 3o38_A Short chain dehydrogena 80.8 1.2 3.9E-05 39.1 3.7 32 108-140 24-57 (266)
449 1b37_A Protein (polyamine oxid 80.7 2.1 7.2E-05 41.0 5.8 56 179-249 207-269 (472)
450 4hv4_A UDP-N-acetylmuramate--L 80.5 1.5 5E-05 42.7 4.6 32 108-140 24-56 (494)
451 2h78_A Hibadh, 3-hydroxyisobut 80.5 1.2 4E-05 40.0 3.7 32 108-140 5-36 (302)
452 1gpj_A Glutamyl-tRNA reductase 80.4 1.2 4E-05 42.2 3.8 34 106-140 167-201 (404)
453 4e4t_A Phosphoribosylaminoimid 80.4 1.9 6.4E-05 41.0 5.3 34 106-140 35-68 (419)
454 3two_A Mannitol dehydrogenase; 80.3 1.6 5.5E-05 40.1 4.7 34 106-140 177-210 (348)
455 1vg0_A RAB proteins geranylger 80.2 3.8 0.00013 41.3 7.6 57 177-248 377-435 (650)
456 3h5n_A MCCB protein; ubiquitin 80.2 1.3 4.5E-05 41.1 4.0 34 106-140 118-152 (353)
457 2g5c_A Prephenate dehydrogenas 80.1 1.6 5.5E-05 38.7 4.4 32 108-140 3-36 (281)
458 2zqz_A L-LDH, L-lactate dehydr 80.0 1.5 5.2E-05 40.2 4.3 33 106-139 9-43 (326)
459 1npy_A Hypothetical shikimate 80.0 1.3 4.4E-05 39.5 3.8 32 107-139 120-152 (271)
460 1edz_A 5,10-methylenetetrahydr 80.0 1.3 4.4E-05 40.6 3.8 33 106-139 177-210 (320)
461 3g79_A NDP-N-acetyl-D-galactos 79.8 1.3 4.5E-05 42.9 4.0 34 108-141 20-54 (478)
462 4e21_A 6-phosphogluconate dehy 79.8 1.7 5.8E-05 40.5 4.6 33 107-140 23-55 (358)
463 3vh1_A Ubiquitin-like modifier 79.8 1.7 5.7E-05 43.2 4.8 34 106-140 327-361 (598)
464 3c7a_A Octopine dehydrogenase; 79.8 1.3 4.5E-05 41.6 3.9 29 108-137 4-33 (404)
465 1yqg_A Pyrroline-5-carboxylate 79.7 1.4 4.8E-05 38.5 3.9 32 108-140 2-34 (263)
466 1y8q_A Ubiquitin-like 1 activa 79.6 1.4 4.7E-05 40.9 3.9 34 106-140 36-70 (346)
467 2o3j_A UDP-glucose 6-dehydroge 79.6 1.3 4.6E-05 42.9 4.0 32 108-139 11-43 (481)
468 2dkn_A 3-alpha-hydroxysteroid 79.5 2 6.7E-05 37.0 4.7 32 108-140 3-35 (255)
469 1yqd_A Sinapyl alcohol dehydro 79.4 1.7 6E-05 40.2 4.6 33 107-140 189-221 (366)
470 2rcy_A Pyrroline carboxylate r 79.3 1.7 5.9E-05 37.9 4.4 33 108-141 6-42 (262)
471 2pd4_A Enoyl-[acyl-carrier-pro 79.3 2.2 7.4E-05 37.6 5.0 32 108-140 8-42 (275)
472 2wtb_A MFP2, fatty acid multif 79.2 1.6 5.5E-05 44.6 4.6 32 108-140 314-345 (725)
473 3n58_A Adenosylhomocysteinase; 79.1 1.5 5.3E-05 42.0 4.1 34 106-140 247-280 (464)
474 3k31_A Enoyl-(acyl-carrier-pro 79.1 1.9 6.4E-05 38.7 4.6 33 107-140 31-66 (296)
475 2gf2_A Hibadh, 3-hydroxyisobut 79.0 1.5 5.2E-05 39.1 3.9 32 108-140 2-33 (296)
476 3nep_X Malate dehydrogenase; h 79.0 1.5 5.2E-05 40.0 4.0 32 108-140 2-35 (314)
477 3ldh_A Lactate dehydrogenase; 78.9 1.5 5E-05 40.4 3.8 32 107-139 22-55 (330)
478 4gsl_A Ubiquitin-like modifier 78.8 1.8 6.1E-05 43.1 4.6 35 106-141 326-361 (615)
479 4aj2_A L-lactate dehydrogenase 78.8 2.2 7.4E-05 39.3 4.9 32 107-139 20-53 (331)
480 1vpd_A Tartronate semialdehyde 78.7 1.5 5E-05 39.3 3.7 32 108-140 7-38 (299)
481 3tri_A Pyrroline-5-carboxylate 78.7 2.4 8.2E-05 37.8 5.1 32 108-140 5-39 (280)
482 1uuf_A YAHK, zinc-type alcohol 78.7 1.9 6.4E-05 40.1 4.6 33 107-140 196-228 (369)
483 3nv9_A Malic enzyme; rossmann 78.6 2.1 7.3E-05 41.0 4.9 37 105-142 218-257 (487)
484 1piw_A Hypothetical zinc-type 78.6 1.7 5.9E-05 40.1 4.3 33 107-140 181-213 (360)
485 2o7s_A DHQ-SDH PR, bifunctiona 78.6 1.3 4.3E-05 43.6 3.5 32 107-139 365-396 (523)
486 3r6d_A NAD-dependent epimerase 78.5 2.1 7.3E-05 36.1 4.6 32 108-140 7-40 (221)
487 3ojo_A CAP5O; rossmann fold, c 78.3 1.5 5E-05 42.0 3.7 34 106-140 11-44 (431)
488 3h9u_A Adenosylhomocysteinase; 78.3 1.7 5.8E-05 41.5 4.1 34 106-140 211-244 (436)
489 3uog_A Alcohol dehydrogenase; 78.3 1.9 6.6E-05 39.8 4.5 45 107-164 191-235 (363)
490 3fi9_A Malate dehydrogenase; s 78.0 2.3 7.8E-05 39.3 4.9 32 107-139 9-43 (343)
491 3uko_A Alcohol dehydrogenase c 77.9 1.7 5.9E-05 40.4 4.1 34 106-140 194-228 (378)
492 1x0v_A GPD-C, GPDH-C, glycerol 77.9 1.1 3.9E-05 41.1 2.8 33 108-141 10-49 (354)
493 1pqw_A Polyketide synthase; ro 77.8 1.3 4.6E-05 36.8 3.0 32 107-139 40-72 (198)
494 2pgd_A 6-phosphogluconate dehy 77.7 2 7E-05 41.5 4.7 32 108-140 4-35 (482)
495 3s2e_A Zinc-containing alcohol 77.3 1.5 5.3E-05 40.0 3.5 45 107-164 168-212 (340)
496 1yj8_A Glycerol-3-phosphate de 77.2 1.4 5E-05 40.9 3.3 33 108-141 23-62 (375)
497 4gwg_A 6-phosphogluconate dehy 77.2 2.5 8.4E-05 41.1 5.0 32 108-140 6-37 (484)
498 3gt0_A Pyrroline-5-carboxylate 77.2 2.8 9.5E-05 36.4 5.0 32 108-140 4-39 (247)
499 1pgj_A 6PGDH, 6-PGDH, 6-phosph 77.1 2.1 7.3E-05 41.4 4.6 32 108-140 3-34 (478)
500 3ktd_A Prephenate dehydrogenas 77.0 2.3 7.8E-05 39.3 4.6 32 108-140 10-41 (341)
No 1
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=100.00 E-value=7.8e-37 Score=287.39 Aligned_cols=251 Identities=59% Similarity=0.997 Sum_probs=209.0
Q ss_pred Cc--cccccCcccchhhhHHHHHhHhhcccCCCCccEEEECCcHHHHHHHHHHhcC-CCCcEEEEeccCCCCCCc-----
Q 039605 75 DL--DAFKFDAIKESIVSRETTRRYMTDMITHADTDVVVVGAGSAGLSCAYEISKN-PNVQVAIIEQSVSPGGAS----- 146 (352)
Q Consensus 75 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DVvIIGgG~aGl~aA~~la~~-~G~kV~viEk~~~~GG~~----- 146 (352)
+| +.|+|.|+.+..++|.+..+++.++....+|||+|||||++|+++|+.|+++ +|++|+|||+...+||+.
T Consensus 46 ~~~~~~~~f~~i~~~~isra~~~~~~~~~~~~~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~ 125 (344)
T 3jsk_A 46 TLGTDAFTFSPIRESTVSRAMTRRYFADLDAHAETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQ 125 (344)
T ss_dssp GTTSTTCCCCCCCHHHHHHHHHHHHHHHHHHHHBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBT
T ss_pred ccccCCcCcccccHHHHHHHHHHhhhhhhcccCcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCc
Confidence 56 6899999999999999999888776656689999999999999999999984 499999999998777542
Q ss_pred ---ceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHHHHHcCCCcEEEccceeEEEEEeC--------------
Q 039605 147 ---GSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-------------- 209 (352)
Q Consensus 147 ---~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~-------------- 209 (352)
.........+|++++|++++..+.+....+..++.+.|++++.+..|+++++++.+++++.++
T Consensus 126 ~~~~~~~~~~~~~~L~~~Gv~~~~~G~~~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~ 205 (344)
T 3jsk_A 126 LFSAMVMRKPADVFLDEVGVPYEDEGDYVVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEA 205 (344)
T ss_dssp TCCCEEEETTTHHHHHHHTCCCEECSSEEEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC-------------
T ss_pred cchhhhcchHHHHHHHHcCCcccccCCeEEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCccccccccccccc
Confidence 122334568899999999987667777777888889999998866899999999999999876
Q ss_pred ---C--EEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCC-----------CC-CCCCCcccccccccccee
Q 039605 210 ---N--RVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPF-----------GA-TGVRGMKALDMNTAEDAI 272 (352)
Q Consensus 210 ---g--~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~-----------~~-~g~~g~~~~~~~~g~~~v 272 (352)
+ ++.|+.++|..+..+.....+.+..+|+|++||+|||+.++. .. ..++++..+|++.+|..+
T Consensus 206 ~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~v~~~~~~~l~~~~~~~~~~g~~~~~~~~~e~~~ 285 (344)
T 3jsk_A 206 EDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGPFGAFSVKRLVSMKQMERLNGMRGLDMQSAEDAI 285 (344)
T ss_dssp ---CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSSSSCHHHHHHHHTTSSSCCCCCEEECHHHHHHHH
T ss_pred ccCCCceEeEEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCchhhHHHHHHHhhcCcccccCCCcccccccchhhh
Confidence 3 899998876432222222223356799999999999998863 11 125888999999999999
Q ss_pred ecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHHcCCCC
Q 039605 273 VKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPN 325 (352)
Q Consensus 273 v~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~l~~~~ 325 (352)
++++++++||+|++||.++.++|.+||||+||+|+.||+|||+.|++.|+...
T Consensus 286 v~~t~~v~~gl~~~gm~~~~~~g~~rmgp~fg~m~~sg~~~a~~~~~~~~~~~ 338 (344)
T 3jsk_A 286 VNNTREIVPGLIVGGMELSEIDGANRMGPTFGAMALSGVKAAHEAIRVFDLRK 338 (344)
T ss_dssp HHTCEEEETTEEECGGGHHHHHTCEECCSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCceEcCCEEEechhhHhhcCCCCCCcccceeeecCHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999986543
No 2
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=100.00 E-value=3.5e-33 Score=261.14 Aligned_cols=260 Identities=55% Similarity=0.870 Sum_probs=207.2
Q ss_pred ccccccCCCCCCCccccccCcccchhhhHHHHHhHhhcccCCCCccEEEECCcHHHHHHHHHHhcC-CCCcEEEEeccCC
Q 039605 63 ISASASASSPPSDLDAFKFDAIKESIVSRETTRRYMTDMITHADTDVVVVGAGSAGLSCAYEISKN-PNVQVAIIEQSVS 141 (352)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DVvIIGgG~aGl~aA~~la~~-~G~kV~viEk~~~ 141 (352)
+......-....+|..+.+.++.+..+.+.+..+++.++....++||+|||||++|+++|+.|++. +|++|+|+|+.+.
T Consensus 22 ~er~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~ 101 (326)
T 2gjc_A 22 VTHCLSDIVKKEDWSDFKFAPIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVA 101 (326)
T ss_dssp CCCTTTTTCCSTTCTTCCCCCCCHHHHHHHHHHHHHHHHHHTTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSS
T ss_pred HHHHHHHHHHhcCCCccccccccccccchhhhhhhhhhhcccCcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcc
Confidence 333333333445666777878888888888888888887777889999999999999999999974 3899999999988
Q ss_pred CCCCcc--------eeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHHHHHcCCCcEEEccceeEEEEEe---C-
Q 039605 142 PGGASG--------SVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK---G- 209 (352)
Q Consensus 142 ~GG~~~--------~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~---~- 209 (352)
.||+.. ........+++.++|+++...+.+....+..++...|++++.+.+|+++++++.+++++.+ +
T Consensus 102 ~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~ 181 (326)
T 2gjc_A 102 PGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEK 181 (326)
T ss_dssp CCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECSSEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC--
T ss_pred ccccccccCcccchhhhhhHHHHHHHhhCcccccCCCeEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccC
Confidence 876521 2233456789999999998766777777788888999999886689999999999999987 3
Q ss_pred C--EEEEEEEcccceeccCCCCCCCCCeEEEe---------------CEEEEccCCCCCCCC------------CCCCCc
Q 039605 210 N--RVGGIVTNWALVSMNHDSQSCMDPNVMEA---------------KVVVSSCGHDGPFGA------------TGVRGM 260 (352)
Q Consensus 210 g--~v~gv~~~~g~~~~~~~~~~~g~~~~i~A---------------~~VIlAtG~~~~~~~------------~g~~g~ 260 (352)
+ +|.|+.++|..+..+..+..+.+..+|.| +.||+|||+.++... ..+.|+
T Consensus 182 g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~~~~~~~~~~~~~~~g~ 261 (326)
T 2gjc_A 182 GEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCAKRIVDIDQNQKLGGM 261 (326)
T ss_dssp ---CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC--CCSHHHHHHHHHHSSCCCCCC
T ss_pred CCcEEEEEEecceeecccccceeccCceEEEEeeccccccccccccCCEEEECcCCCchHHHHHHhhccccccccccCce
Confidence 5 89999887643222221122335678999 999999999886532 124788
Q ss_pred cccccccccceeeccccc--ccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHHcC
Q 039605 261 KALDMNTAEDAIVKLTRE--IVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLG 322 (352)
Q Consensus 261 ~~~~~~~g~~~vv~~~~~--~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~l~ 322 (352)
..+|++.+|..+++++++ ++||+|++||.++.++|.+||||+||+|++||+|||+.|++.|.
T Consensus 262 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~r~g~~fg~m~~sg~~~a~~~~~~~~ 325 (326)
T 2gjc_A 262 KGLDMNHAEHDVVIHSGAYAGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp CCBCHHHHHHHHHHHCEECTTSTTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred eccccccchhheeecCCCccccCCEEECChHHHHhcCCCCCChhhhhhhhhhHHHHHHHHHHhh
Confidence 899999999999999999 99999999999999999999999999999999999999999874
No 3
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=100.00 E-value=2e-31 Score=246.49 Aligned_cols=259 Identities=86% Similarity=1.252 Sum_probs=199.5
Q ss_pred CCCCccccccCcccchhhhHHHHHhHhhcccCCCCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcc----
Q 039605 72 PPSDLDAFKFDAIKESIVSRETTRRYMTDMITHADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASG---- 147 (352)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~---- 147 (352)
...+|+.|+|.+++|..++|.|+.+|+.+|..+.++||+|||||++|+++|+.|++.+|++|+||||.+.+|++..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~ 84 (284)
T 1rp0_A 5 AGYDLNAFTFDPIKESIVSREMTRRYMTDMITYAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQ 84 (284)
T ss_dssp --CCTTSCCCCCCCHHHHHHHHHHHHHHHHHHHTEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCST
T ss_pred cCCCCcceeeeccchhhhHHHHHHHHHHhhhhccccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCc
Confidence 4567899999999999999999999988776667899999999999999999999833999999999987765421
Q ss_pred ----eeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEccccee
Q 039605 148 ----SVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVS 223 (352)
Q Consensus 148 ----~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~ 223 (352)
.....+..+|++++|+++.....+....+..++...+.+++.++.|++++++++|+++..+++++.++.+.+..+.
T Consensus 85 ~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~ 164 (284)
T 1rp0_A 85 LFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVA 164 (284)
T ss_dssp TCCCEEEETTTHHHHHHHTCCCEECSSEEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHH
T ss_pred chHHHHcCcHHHHHHHHcCCCcccCCCEEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccc
Confidence 1223446789999999988766666555777888888888876689999999999999999889888877532111
Q ss_pred ccCCCCCCCCCeEEEeCEEEEccCCCCCCCC------------CCCCCccccccccccceeecccccccCceeEecchhh
Q 039605 224 MNHDSQSCMDPNVMEAKVVVSSCGHDGPFGA------------TGVRGMKALDMNTAEDAIVKLTREIVPGMIVAGMEVA 291 (352)
Q Consensus 224 ~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~------------~g~~g~~~~~~~~g~~~vv~~~~~~~pg~~~aG~~~~ 291 (352)
++..++.+++..+++||.||+|+|+.+.... +++....+++.+..+..++++++++.|++|++|+++.
T Consensus 165 ~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~~~~~~~~g~~~~v~~~~g~~~~~~~~~~v~~~~~~~p~i~a~G~~~~ 244 (284)
T 1rp0_A 165 QNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDHVPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVA 244 (284)
T ss_dssp TCTTTSSCCCCEEEEEEEEEECCCSSSTTTTHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHHCEEEETTEEECTHHHH
T ss_pred cccCccccCceEEEECCEEEECCCCchHHHHHHHHHhhhccCCCCcCCcCCchhhhhhHHHhhccccccCCEEEEeeehh
Confidence 1111111234578999999999998764311 1222233344443333445566788899999999998
Q ss_pred hhcCCCCCCcchhhhhhchHHHHHHHHHHcCCCCCCCCc
Q 039605 292 EIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNAMDGT 330 (352)
Q Consensus 292 ~~~g~~r~g~~~~~~~~sG~~aA~~i~~~l~~~~~~~~~ 330 (352)
.++|.++++|+|++|+.||+++|+.|+++|+.....++.
T Consensus 245 ~~~g~~~~gp~~~~~~~sG~~~a~~i~~~l~~~~~~~~~ 283 (284)
T 1rp0_A 245 EIDGAPRMGPTFGAMMISGQKAGQLALKALGLPNAIDGT 283 (284)
T ss_dssp HHHTCEECCSCCHHHHHHHHHHHHHHHHHTTCCCTTTTC
T ss_pred hhcCCCCcChHHHHHHHhHHHHHHHHHHHhhhhhhhhcC
Confidence 889999999999999999999999999999988877653
No 4
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.95 E-value=8.3e-27 Score=219.33 Aligned_cols=261 Identities=53% Similarity=0.820 Sum_probs=183.3
Q ss_pred ccccccccCCCCCCCccccccCcccchhhhHHHHHhHhhcccCCCCccEEEECCcHHHHHHHHHHhc--CCCCcEEEEec
Q 039605 61 MSISASASASSPPSDLDAFKFDAIKESIVSRETTRRYMTDMITHADTDVVVVGAGSAGLSCAYEISK--NPNVQVAIIEQ 138 (352)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DVvIIGgG~aGl~aA~~la~--~~G~kV~viEk 138 (352)
.++...........+++.|+|.|+.+..++|.|.++|+.+|.+..++||+||||||+||+||++|++ . |++|+||||
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DV~IIGaGPAGlsAA~~la~~r~-G~~V~viEk 98 (326)
T 3fpz_A 20 TPVTHCLSDIVKKEDWSDFKFAPIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRP-DLKVCIIES 98 (326)
T ss_dssp SCCCCTTTTTCCSTTCTTCCCCCCCHHHHHHHHHHHHHHHHHHTTEESEEEECCSHHHHHHHHHHHHHCT-TSCEEEECS
T ss_pred CCchhhhhhhcccccccccccCCccHHHHHHHHHHHHHhhhhhccCCCEEEECCCHHHHHHHHHHHHhCC-CCeEEEEEC
Confidence 3344444444555678899999999999999999999999988889999999999999999999974 5 999999999
Q ss_pred cCCCCCCcc--------eeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHHHHHcCCCcEEEccceeEEEEEeCC
Q 039605 139 SVSPGGASG--------SVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGN 210 (352)
Q Consensus 139 ~~~~GG~~~--------~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g 210 (352)
++.+||... ..+.....+.++++|+++..........+...+......+....+|.+++....+..+...++
T Consensus 99 ~~~~GG~~~~~~~~~~~~~l~~~~~~~~~e~Gv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 178 (326)
T 3fpz_A 99 SVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPP 178 (326)
T ss_dssp SSSCCTTTTCCSTTCCCEEEETTTHHHHHHTTCCCEECSSEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEEESS
T ss_pred CCCCCceEEeCCccCCHHHHHHHHHHHHHHcCCEEEECCcceecceeEEEEcchhhhccccccceeecccccceeeccCC
Confidence 998888622 233444567788999998776655555555555566666666788999999999988887643
Q ss_pred ------EEEEEEEcccceeccCCCCCCCCCeEE---------------EeCEEEEccCCCCCCCCC------------CC
Q 039605 211 ------RVGGIVTNWALVSMNHDSQSCMDPNVM---------------EAKVVVSSCGHDGPFGAT------------GV 257 (352)
Q Consensus 211 ------~v~gv~~~~g~~~~~~~~~~~g~~~~i---------------~A~~VIlAtG~~~~~~~~------------g~ 257 (352)
++..+...+..++.-......+...++ ..+.++..+|........ ..
T Consensus 179 ~~~~~~~v~viggg~~av~~a~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 258 (326)
T 3fpz_A 179 TEKGEVTVAGVVTNWTLVTQAHGTQCAMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCAKRIVDIDQNQKL 258 (326)
T ss_dssp CSSSSCEEEEEEEEEHHHHTCTTSSSCCCCEEEEESCBCTTSSBCTTSCCCEEEECCCSCSSSCSHHHHHHHHHCTTCCC
T ss_pred cccCCCEEEEEccCceeeehhhhhhhccCcEEEEeecccccccccceeecceEEEEecceeeEeecceeEEEecCceeee
Confidence 333333222111111111111112222 235777888865532211 11
Q ss_pred CCccccccccccce--eecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHHcC
Q 039605 258 RGMKALDMNTAEDA--IVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLG 322 (352)
Q Consensus 258 ~g~~~~~~~~g~~~--vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~l~ 322 (352)
.++..++.+..+.. +...+.+++||+|++||++..+++.+||||+|++|+.||++||+.|+++|.
T Consensus 259 ~g~~~~~~~~~e~~iv~~~~~~t~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~la 325 (326)
T 3fpz_A 259 GGMKGLDMNHAEHDVVIHSGAYAGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp CCCCCBCHHHHHHHHHHHCEECTTSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred cceecccccccCCeEEECCCeEECCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHHhc
Confidence 33334443333222 224567889999999999999999999999999999999999999999984
No 5
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.78 E-value=8.3e-18 Score=150.34 Aligned_cols=183 Identities=23% Similarity=0.277 Sum_probs=117.9
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCc-ceeec-chHHHHHHHcCCccccCCCeEEEechHHHHHH
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGAS-GSVVR-KPAHLFLDELGIDYDEQDNYVVIKHAALFTST 183 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~-~~~~~-~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~ 183 (352)
+|||+|||||++|+.+|+.|++. |++|+|||+.....|.+ ..... ....+.+.++. +..+. ....+...
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~-g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~---d~~g~-----~~~~~~~~ 73 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQK-GVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAY---DPKDE-----RVWAFHAR 73 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-TCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHC---CTTCC-----CHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCCEEEEecCCCcCCcccCccccccchhhHHhhhc---cCCCC-----CHHHHHHH
Confidence 68999999999999999999999 99999999973222211 00000 00001122221 00000 34466677
Q ss_pred HHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCC-CCC-----
Q 039605 184 IMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGA-TGV----- 257 (352)
Q Consensus 184 L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~-~g~----- 257 (352)
+.+.+.+..|++++ +++++++..++++++++.+.++ .+++||.||+|+|.++.... .|.
T Consensus 74 l~~~~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~~~g--------------~~i~a~~VV~A~G~~s~~~~~~G~~~~~~ 138 (232)
T 2cul_A 74 AKYLLEGLRPLHLF-QATATGLLLEGNRVVGVRTWEG--------------PPARGEKVVLAVGSFLGARLFLGGVVEEA 138 (232)
T ss_dssp HHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTS--------------CCEECSEEEECCTTCSSCEEEETTEEESE
T ss_pred HHHHHHcCCCcEEE-EeEEEEEEEeCCEEEEEEECCC--------------CEEECCEEEECCCCChhhceecCCccCCC
Confidence 77777644599999 4699999998888878877542 47999999999998654210 010
Q ss_pred --CC------------------------------c-------cccccccccceeecccccccCceeEecchhhhhcCCCC
Q 039605 258 --RG------------------------------M-------KALDMNTAEDAIVKLTREIVPGMIVAGMEVAEIDGAPR 298 (352)
Q Consensus 258 --~g------------------------------~-------~~~~~~~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r 298 (352)
.+ . ..++...++..++ ..+.+||+|++||++ ..|
T Consensus 139 g~~g~~~~~~l~~~l~~~g~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~--~~t~~p~iya~G~~a--~~g--- 211 (232)
T 2cul_A 139 GRLSEASYPDLLEDLSRLGFRFVEREGEVPETPSTPGYRVRYLAFHPEEWEEKTF--RLKRLEGLYAVGLCV--REG--- 211 (232)
T ss_dssp EETTEECCSHHHHHHHHTTCCEEEEEEEEC-----CCEEEEEEEECGGGEETTTT--EETTSBSEEECGGGT--SCC---
T ss_pred CCCcccchhhhCHHHHhCCCeEEccccccCcCCCCCCccCchhhcccCCCCCccc--cccccccceeeeecc--cCc---
Confidence 00 0 1111111221222 224899999999999 333
Q ss_pred CCcchhhhhhchHHHHHHHHHHcC
Q 039605 299 MGPTFGAMMISGQKAAHLALKSLG 322 (352)
Q Consensus 299 ~g~~~~~~~~sG~~aA~~i~~~l~ 322 (352)
+++.|+.+|+++|+.|++.|+
T Consensus 212 ---~~~~~~~~g~~~a~~i~~~l~ 232 (232)
T 2cul_A 212 ---DYARMSEEGKRLAEHLLHELG 232 (232)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHC-
T ss_pred ---cHHHHHHHHHHHHHHHHhhcC
Confidence 688889999999999998873
No 6
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.72 E-value=2.7e-17 Score=152.54 Aligned_cols=114 Identities=18% Similarity=0.241 Sum_probs=71.6
Q ss_pred CCCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHH
Q 039605 104 HADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTST 183 (352)
Q Consensus 104 ~~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~ 183 (352)
|.+|||+||||||+|++||++|++. |++|+|||++. .||.....+ .++... .. ....++...
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~-g~~v~lie~~~-~gg~~~~~~----------~~~~~~--~~----~~~~~~~~~ 65 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRA-RKQIALFDNNT-NRNRVTQNS----------HGFITR--DG----IKPEEFKEI 65 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSC-CGGGGSSCB----------CCSTTC--TT----BCHHHHHHH
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCC-CCCeeeeec----------CCccCC--CC----CCHHHHHHH
Confidence 3589999999999999999999999 99999999974 444211100 011100 00 123455556
Q ss_pred HHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 184 IMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 184 L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
..+++.+..++.++.. .+..+...+....-+.+.+ ..++++|.||+|||..+
T Consensus 66 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~--------------g~~~~a~~liiATGs~p 117 (304)
T 4fk1_A 66 GLNEVMKYPSVHYYEK-TVVMITKQSTGLFEIVTKD--------------HTKYLAERVLLATGMQE 117 (304)
T ss_dssp HHHHHTTSTTEEEEEC-CEEEEEECTTSCEEEEETT--------------CCEEEEEEEEECCCCEE
T ss_pred HHHHHHhcCCEEEEee-EEEEeeecCCCcEEEEECC--------------CCEEEeCEEEEccCCcc
Confidence 6666665556666655 4555554433222344432 26899999999999753
No 7
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.67 E-value=3e-16 Score=145.44 Aligned_cols=117 Identities=16% Similarity=0.128 Sum_probs=79.6
Q ss_pred HHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCccccc-
Q 039605 186 SKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALD- 264 (352)
Q Consensus 186 ~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~- 264 (352)
.+.....+++.+......++...+....++...+. ..++..++.+|.||+|+|..+..... +.. +.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---------~~~~~~~i~~d~vi~a~G~~pn~~~l---~~~-~~~ 261 (314)
T 4a5l_A 195 ERVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNL---------VSGEYKVVPVAGLFYAIGHSPNSKFL---GGQ-VKT 261 (314)
T ss_dssp HHHHTCTTEEEECSEEEEEEEESSSSEEEEEEEET---------TTCCEEEEECSEEEECSCEEESCGGG---TTS-SCB
T ss_pred hhhhcccceeeEeeeeeEEEEeeeeccceeEEeec---------ccccceeeccccceEecccccChhHh---ccc-ceE
Confidence 33444567888888888888777666666665431 11245789999999999965433221 111 22
Q ss_pred cccccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHHcC
Q 039605 265 MNTAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLG 322 (352)
Q Consensus 265 ~~~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~l~ 322 (352)
.+.|. +++++++|+.||+|++||++... .++ ...|+.+|++||..|.+||+
T Consensus 262 ~~~G~-iv~~~~~Ts~pgIyA~GDv~~~~---~~~---~~~A~~~G~~AA~~~~~yL~ 312 (314)
T 4a5l_A 262 ADDGY-ILTEGPKTSVDGVFACGDVCDRV---YRQ---AIVAAGSGCMAALSCEKWLQ 312 (314)
T ss_dssp CTTSC-BCCBTTBCSSTTEEECSTTTCSS---CCC---HHHHHHHHHHHHHHHHHHHH
T ss_pred cCCee-EeCCCCccCCCCEEEEEeccCCc---chH---HHHHHHHHHHHHHHHHHHHh
Confidence 23344 46688899999999999998542 233 33457899999999999985
No 8
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.67 E-value=1.8e-15 Score=144.04 Aligned_cols=129 Identities=21% Similarity=0.296 Sum_probs=94.8
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCC--cceeecchHHHHHHHcCCccccC---------------
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGA--SGSVVRKPAHLFLDELGIDYDEQ--------------- 168 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~--~~~~~~~~~~~~l~~~Gi~~~~~--------------- 168 (352)
+|||+||||||+|+++|+.|+++ |++|+||||.+.+|.. ++..+.. +.++++++.....
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~-G~~V~v~Er~~~~~~~~~~g~~l~~---~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 79 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKY-GLKTLMIEKRPEIGSPVRCGEGLSK---GILNEADIKADRSFIANEVKGARIYGPS 79 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSTTCSCCSCCEEET---HHHHHTTCCCCTTTEEEEESEEEEECTT
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCcEEEEeCCCCCCCCCceecccCH---HHHHHcCCCchhhhhhcccceEEEEeCC
Confidence 69999999999999999999999 9999999998776542 1222222 3455555432210
Q ss_pred -------------CCeEEEechHHHHHHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCe
Q 039605 169 -------------DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPN 235 (352)
Q Consensus 169 -------------~~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~ 235 (352)
....+..+...+...|.+++. +.|+++++++.++++..+++++.++....+ ++..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~-~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~-----------~~~~ 147 (397)
T 3oz2_A 80 EKRPIILQSEKAGNEVGYVLERDKFDKHLAALAA-KAGADVWVKSPALGVIKENGKVAGAKIRHN-----------NEIV 147 (397)
T ss_dssp CSSCEEEECSSSSCCCEEEECHHHHHHHHHHHHH-HHTCEEESSCCEEEEEEETTEEEEEEEEET-----------TEEE
T ss_pred CceEeeccccccCCceeEEEEHHHHHHHHHHHHH-hcCcEEeeeeeeeeeeeccceeeeeeeccc-----------ccce
Confidence 011223455677777777776 579999999999999999999887765321 1346
Q ss_pred EEEeCEEEEccCCCC
Q 039605 236 VMEAKVVVSSCGHDG 250 (352)
Q Consensus 236 ~i~A~~VIlAtG~~~ 250 (352)
+++|+.||.|+|.++
T Consensus 148 ~~~a~~vIgAdG~~S 162 (397)
T 3oz2_A 148 DVRAKMVIAADGFES 162 (397)
T ss_dssp EEEEEEEEECCCTTC
T ss_pred EEEEeEEEeCCcccc
Confidence 899999999999876
No 9
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.65 E-value=1.1e-15 Score=130.64 Aligned_cols=172 Identities=17% Similarity=0.124 Sum_probs=116.2
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
|||+|||||++|+.+|..|++. |.+|+|||+.+..-......... .+++. .....++.+.+.+
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~-g~~v~lie~~~~~~~~~~~~~~~--------~~~~~--------~~~~~~~~~~l~~ 64 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARA-GLKVLVLDGGRSKVKGVSRVPNY--------PGLLD--------EPSGEELLRRLEA 64 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSCCTTTTCSCCCCS--------TTCTT--------CCCHHHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCcEEEEeCCCCcccCchhhhcc--------CCCcC--------CCCHHHHHHHHHH
Confidence 6999999999999999999999 99999999976321100000000 00000 0123556666666
Q ss_pred HHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCccccccc
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDMN 266 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~~ 266 (352)
.+. +.|++++++ +++++..+++.+ .+.+.+ . ++.+|.||+|+|..+.. +...++..+
T Consensus 65 ~~~-~~gv~v~~~-~v~~i~~~~~~~-~v~~~~--------------g-~i~ad~vI~A~G~~~~~-----~~~~g~~~~ 121 (180)
T 2ywl_A 65 HAR-RYGAEVRPG-VVKGVRDMGGVF-EVETEE--------------G-VEKAERLLLCTHKDPTL-----PSLLGLTRR 121 (180)
T ss_dssp HHH-HTTCEEEEC-CCCEEEECSSSE-EEECSS--------------C-EEEEEEEEECCTTCCHH-----HHHHTCCEE
T ss_pred HHH-HcCCEEEeC-EEEEEEEcCCEE-EEEECC--------------C-EEEECEEEECCCCCCCc-----cccCCCCcc
Confidence 665 568999999 999998765543 333321 2 79999999999977521 111122233
Q ss_pred cccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHHcCCC
Q 039605 267 TAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQP 324 (352)
Q Consensus 267 ~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~l~~~ 324 (352)
.+...+.++.++..|++|++||+..... +.+..++.+|..||..|..++++.
T Consensus 122 ~g~i~vd~~~~t~~~~i~a~GD~~~~~~------~~~~~A~~~g~~aa~~i~~~~~~~ 173 (180)
T 2ywl_A 122 GAYIDTDEGGRTSYPRVYAAGVARGKVP------GHAIISAGDGAYVAVHLVSDLRGE 173 (180)
T ss_dssp TTEECCCTTCBCSSTTEEECGGGGTCCS------CCHHHHHHHHHHHHHHHHHHHHTS
T ss_pred CceEEeCCCCCcCCCCEEEeecccCcch------hhHHHHHHhHHHHHHHHHHHhhhc
Confidence 4555566778889999999999986421 134556789999999999988654
No 10
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.64 E-value=1.8e-15 Score=140.48 Aligned_cols=116 Identities=15% Similarity=0.058 Sum_probs=74.9
Q ss_pred cCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCcccccccccc
Q 039605 190 ARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDMNTAE 269 (352)
Q Consensus 190 ~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~~~g~ 269 (352)
+..++.+.....+......+.......... .. .++...+.++.|+.++|..+.... .....+..+.+.
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~---~~~~~~~~~d~v~~~~g~~~~~~~---~~~~g~~~~~G~ 259 (312)
T 4gcm_A 192 KNDKIDFIWSHTLKSINEKDGKVGSVTLTS------TK---DGSEETHEADGVFIYIGMKPLTAP---FKDLGITNDVGY 259 (312)
T ss_dssp HCTTEEEECSEEEEEEEEETTEEEEEEEEE------TT---TCCEEEEECSEEEECSCEEESCGG---GGGGTCBCTTSC
T ss_pred HhcCcceeeecceeeeeccccccccceeee------ec---CCceeEEeeeeEEeecCCCcCchh---HHhcceecCCCe
Confidence 355666666666666655554333222211 11 124578999999999996543322 222223345677
Q ss_pred ceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHHcCC
Q 039605 270 DAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQ 323 (352)
Q Consensus 270 ~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~l~~ 323 (352)
+.+.++++|+.||+|++||+.... ++ ....|+.+|+.||+.|.+||++
T Consensus 260 I~vd~~~~Ts~pgIyA~GDv~~~~---~~---~~~~A~~~G~~AA~~i~~~L~~ 307 (312)
T 4gcm_A 260 IVTKDDMTTSVPGIFAAGDVRDKG---LR---QIVTATGDGSIAAQSAAEYIEH 307 (312)
T ss_dssp BCCCTTSBCSSTTEEECSTTBSCS---CC---SHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeeCCCCccCCCCEEEEeecCCCc---ch---HHHHHHHHHHHHHHHHHHHHHh
Confidence 777789999999999999997421 22 2345678999999999999864
No 11
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.60 E-value=7.1e-15 Score=137.19 Aligned_cols=123 Identities=15% Similarity=0.049 Sum_probs=85.5
Q ss_pred HHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCccc
Q 039605 183 TIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKA 262 (352)
Q Consensus 183 ~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~ 262 (352)
.+.+++.+..|++++.++.+.++..+++++.++.+.+. . +++..++.+|.||+|+|..+..... .. .
T Consensus 213 ~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~------~---~g~~~~i~~D~vi~a~G~~p~~~~~---~~-~ 279 (338)
T 3itj_A 213 IMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNT------K---KNEETDLPVSGLFYAIGHTPATKIV---AG-Q 279 (338)
T ss_dssp HHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEET------T---TTEEEEEECSEEEECSCEEECCGGG---BT-T
T ss_pred HHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEEC------C---CCceEEEEeCEEEEEeCCCCChhHh---hC-c
Confidence 34455555569999999999999988877877877541 1 1234689999999999975443221 11 3
Q ss_pred cccc-ccccee-ecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHHcCCC
Q 039605 263 LDMN-TAEDAI-VKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQP 324 (352)
Q Consensus 263 ~~~~-~g~~~v-v~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~l~~~ 324 (352)
+..+ .+...+ .+...+..|++|++||+.... ++ .+..++.+|..||..|.++|.+.
T Consensus 280 l~~~~~G~i~v~~~~~~t~~~~vya~GD~~~~~---~~---~~~~A~~~g~~aa~~i~~~l~~~ 337 (338)
T 3itj_A 280 VDTDEAGYIKTVPGSSLTSVPGFFAAGDVQDSK---YR---QAITSAGSGCMAALDAEKYLTSL 337 (338)
T ss_dssp BCBCTTSCBCCCTTSSBCSSTTEEECGGGGCSS---CC---CHHHHHHHHHHHHHHHHHHHTTC
T ss_pred eEecCCCcEEEcCcccccCCCCEEEeeccCCCC---cc---ceeeehhhhHHHHHHHHHHHhcC
Confidence 3333 444443 456678899999999998521 22 23455889999999999999764
No 12
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.58 E-value=1.1e-14 Score=140.96 Aligned_cols=112 Identities=17% Similarity=0.085 Sum_probs=82.0
Q ss_pred cCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCcccccccccc
Q 039605 190 ARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDMNTAE 269 (352)
Q Consensus 190 ~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~~~g~ 269 (352)
++.|+++++++.+.++..+++++.++.+.++ .++.||.||+|+|..+.... ....++..+.+
T Consensus 205 ~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG--------------~~i~aD~Vv~a~G~~p~~~l---~~~~gl~~~~g- 266 (415)
T 3lxd_A 205 RAHGVDLRTGAAMDCIEGDGTKVTGVRMQDG--------------SVIPADIVIVGIGIVPCVGA---LISAGASGGNG- 266 (415)
T ss_dssp HHTTCEEEETCCEEEEEESSSBEEEEEESSS--------------CEEECSEEEECSCCEESCHH---HHHTTCCCSSS-
T ss_pred HhCCCEEEECCEEEEEEecCCcEEEEEeCCC--------------CEEEcCEEEECCCCccChHH---HHhCCCCcCCC-
Confidence 3579999999999999988888888887542 58999999999997654311 11122333334
Q ss_pred ceeecccccccCceeEecchhhhhc----CCCCCCcchhhhhhchHHHHHHHHH
Q 039605 270 DAIVKLTREIVPGMIVAGMEVAEID----GAPRMGPTFGAMMISGQKAAHLALK 319 (352)
Q Consensus 270 ~~vv~~~~~~~pg~~~aG~~~~~~~----g~~r~g~~~~~~~~sG~~aA~~i~~ 319 (352)
+.+.+++++..|++|++||+..... |.......+..+..+|+.||..|+.
T Consensus 267 i~vd~~~~t~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 320 (415)
T 3lxd_A 267 VDVDEFCRTSLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDICG 320 (415)
T ss_dssp EECCTTCBCSSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHHHHHHHHHHTT
T ss_pred EEECCCCCcCCCCEEEEEeeeeecCcccCCcceeechHHHHHHHHHHHHHHhcC
Confidence 4556778889999999999986543 3333344567778999999999874
No 13
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.56 E-value=2.1e-14 Score=140.38 Aligned_cols=132 Identities=19% Similarity=0.360 Sum_probs=97.1
Q ss_pred CCCCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCC--------ccee-----------e-------------
Q 039605 103 THADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGA--------SGSV-----------V------------- 150 (352)
Q Consensus 103 ~~~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~--------~~~~-----------~------------- 150 (352)
..+++||+|||||++|+++|+.|++. |++|+||||.+.+|+. +... +
T Consensus 23 ~~~~~dVvIIGgG~aGl~aA~~la~~-G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (447)
T 2i0z_A 23 NAMHYDVIVIGGGPSGLMAAIGAAEE-GANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSI 101 (447)
T ss_dssp --CCCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHH
T ss_pred ccCCCCEEEECCcHHHHHHHHHHHHC-CCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHh
Confidence 34578999999999999999999999 9999999998876532 0000 0
Q ss_pred --cchHHHHHHHcCCccccCCC-eEEE--echHHHHHHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceecc
Q 039605 151 --RKPAHLFLDELGIDYDEQDN-YVVI--KHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMN 225 (352)
Q Consensus 151 --~~~~~~~l~~~Gi~~~~~~~-~~~~--~~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~ 225 (352)
.....+|++.+|+++..... ..+. .....+.+.|.+.+. +.|++++++++|+++..++++++++.+.++
T Consensus 102 ~~~~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~-~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G----- 175 (447)
T 2i0z_A 102 FNNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLK-DLGVKIRTNTPVETIEYENGQTKAVILQTG----- 175 (447)
T ss_dssp SCHHHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHH-HTTCEEECSCCEEEEEEETTEEEEEEETTC-----
T ss_pred cCHHHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHH-HCCCEEEeCcEEEEEEecCCcEEEEEECCC-----
Confidence 00134567778887654321 1111 134677788888777 479999999999999998888888887532
Q ss_pred CCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 226 HDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 226 ~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
.+++||.||+|+|+++
T Consensus 176 ---------~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 176 ---------EVLETNHVVIAVGGKS 191 (447)
T ss_dssp ---------CEEECSCEEECCCCSS
T ss_pred ---------CEEECCEEEECCCCCc
Confidence 3699999999999987
No 14
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.55 E-value=2.8e-14 Score=140.89 Aligned_cols=115 Identities=9% Similarity=0.049 Sum_probs=77.8
Q ss_pred HHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCcc
Q 039605 182 STIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMK 261 (352)
Q Consensus 182 ~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~ 261 (352)
..+.+.+. +.|++++.++.+.++..+++++ .+.+.+ ..++.+|.||+|+|..+.....+. ...
T Consensus 236 ~~l~~~l~-~~Gv~i~~~~~V~~i~~~~~~v-~v~~~~--------------g~~i~aD~Vi~A~G~~p~~~~l~l-~~~ 298 (484)
T 3o0h_A 236 QLLNDAMV-AKGISIIYEATVSQVQSTENCY-NVVLTN--------------GQTICADRVMLATGRVPNTTGLGL-ERA 298 (484)
T ss_dssp HHHHHHHH-HHTCEEESSCCEEEEEECSSSE-EEEETT--------------SCEEEESEEEECCCEEECCTTCCH-HHH
T ss_pred HHHHHHHH-HCCCEEEeCCEEEEEEeeCCEE-EEEECC--------------CcEEEcCEEEEeeCCCcCCCCCCh-hhc
Confidence 34444443 5699999999999998876665 455543 257999999999997654322111 111
Q ss_pred ccccc-cccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHH
Q 039605 262 ALDMN-TAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKS 320 (352)
Q Consensus 262 ~~~~~-~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~ 320 (352)
++..+ .+...+.++.++..|++|++||+... +. ....+..+|+.+|..|+..
T Consensus 299 g~~~~~~G~i~vd~~~~t~~~~Iya~GD~~~~----~~---~~~~A~~~g~~aa~~i~~~ 351 (484)
T 3o0h_A 299 GVKVNEFGAVVVDEKMTTNVSHIWAVGDVTGH----IQ---LTPVAIHDAMCFVKNAFEN 351 (484)
T ss_dssp TCCBCTTSCBCCCTTSBCSSTTEEECGGGGTS----CC---CHHHHHHHHHHHHHHHHC-
T ss_pred CceECCCCCEeECCCCCCCCCCEEEEEecCCC----Cc---CHHHHHHHHHHHHHHHcCC
Confidence 23322 35556667888999999999999752 22 2335578999999999853
No 15
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.54 E-value=1.4e-14 Score=134.20 Aligned_cols=125 Identities=15% Similarity=0.153 Sum_probs=83.5
Q ss_pred HHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCccc
Q 039605 183 TIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKA 262 (352)
Q Consensus 183 ~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~ 262 (352)
.+.+++.++.|++++.++.+.++..+ +++.++.+.+. .+ |+..++.+|.||+|+|..+.... ....+
T Consensus 194 ~~~~~~~~~~gv~~~~~~~v~~i~~~-~~~~~v~~~~~------~~---g~~~~~~~D~vv~a~G~~p~~~~---~~~~g 260 (323)
T 3f8d_A 194 IYVETVKKKPNVEFVLNSVVKEIKGD-KVVKQVVVENL------KT---GEIKELNVNGVFIEIGFDPPTDF---AKSNG 260 (323)
T ss_dssp HHHHHHHTCTTEEEECSEEEEEEEES-SSEEEEEEEET------TT---CCEEEEECSEEEECCCEECCHHH---HHHTT
T ss_pred HHHHHHHhCCCcEEEeCCEEEEEecc-CceeEEEEEEC------CC---CceEEEEcCEEEEEECCCCChhH---HhhcC
Confidence 34555665669999999999999876 55666666430 11 23458999999999996554211 11111
Q ss_pred ccc-ccccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHHcCCC
Q 039605 263 LDM-NTAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQP 324 (352)
Q Consensus 263 ~~~-~~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~l~~~ 324 (352)
+.. ..+...+.++.++..|++|++||+.... +.+ ..+..++.+|..||..|.++|.+.
T Consensus 261 ~~~~~~g~i~vd~~~~t~~~~vya~GD~~~~~-~~~---~~~~~A~~~g~~aa~~i~~~l~~~ 319 (323)
T 3f8d_A 261 IETDTNGYIKVDEWMRTSVPGVFAAGDCTSAW-LGF---RQVITAVAQGAVAATSAYRYVTEK 319 (323)
T ss_dssp CCBCTTSSBCCCTTCBCSSTTEEECSTTBSTT-TTC---CCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred eeecCCCcEecCCCceecCCCEEEcceecCCC-Ccc---cceeehhhHHHHHHHHHHHHHHHh
Confidence 222 2355555677788899999999998532 111 234556889999999999998654
No 16
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.54 E-value=6.2e-14 Score=137.66 Aligned_cols=115 Identities=9% Similarity=0.071 Sum_probs=78.0
Q ss_pred HHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEE-EcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCc
Q 039605 182 STIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIV-TNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGM 260 (352)
Q Consensus 182 ~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~-~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~ 260 (352)
+.+.+.+. +.|++++.++.+.++..++++...+. +.+ .. +.+|.||+|+|..+.....+. ..
T Consensus 215 ~~l~~~l~-~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~--------------g~-i~aD~Vv~a~G~~p~~~~l~l-~~ 277 (463)
T 4dna_A 215 RGLHAAME-EKGIRILCEDIIQSVSADADGRRVATTMKH--------------GE-IVADQVMLALGRMPNTNGLGL-EA 277 (463)
T ss_dssp HHHHHHHH-HTTCEEECSCCEEEEEECTTSCEEEEESSS--------------CE-EEESEEEECSCEEESCTTSST-GG
T ss_pred HHHHHHHH-HCCCEEECCCEEEEEEEcCCCEEEEEEcCC--------------Ce-EEeCEEEEeeCcccCCCCCCc-cc
Confidence 34444443 67999999999999988755433455 432 24 999999999997654332111 11
Q ss_pred cccccc-cccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHH
Q 039605 261 KALDMN-TAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKS 320 (352)
Q Consensus 261 ~~~~~~-~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~ 320 (352)
.++..+ .|...+.+++++..|++|++||+... + .....+..+|+.+|..|+..
T Consensus 278 ~g~~~~~~G~i~vd~~~~t~~~~iya~GD~~~~----~---~~~~~A~~~g~~aa~~i~g~ 331 (463)
T 4dna_A 278 AGVRTNELGAIIVDAFSRTSTPGIYALGDVTDR----V---QLTPVAIHEAMCFIETEYKN 331 (463)
T ss_dssp GTCCBCTTSCBCCCTTCBCSSTTEEECSGGGSS----C---CCHHHHHHHHHHHHHHHHSS
T ss_pred cCceECCCCCEeECcCCCCCCCCEEEEEecCCC----C---CChHHHHHHHHHHHHHHcCC
Confidence 223333 46666778888999999999999752 1 22345678999999999853
No 17
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.52 E-value=5e-14 Score=140.05 Aligned_cols=133 Identities=22% Similarity=0.313 Sum_probs=97.4
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCccee-----------------ec----------------
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSV-----------------VR---------------- 151 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~-----------------~~---------------- 151 (352)
.++||||||+|++|+++|+.|+++ |++|+||||.+..||..... ..
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~-G~~V~vlEk~~~~GG~s~~s~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~ 118 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARA-GADVLVLERTSGWGGATALAGGFIYLGGGTPLQKACGFDDSPENMKTFMMAALGP 118 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCTTGGGSCCCEECCSSCHHHHHTTCCCCHHHHHHHHHHHSCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCcEEEEeCCCCCCCcchhcCcceecCCCCHHHHHhCCCCCHHHHHHHHHHHhCC
Confidence 368999999999999999999999 99999999998877642100 00
Q ss_pred --------------chHHHHHHHcCCccccC------------CCeEE--------------------Ee----------
Q 039605 152 --------------KPAHLFLDELGIDYDEQ------------DNYVV--------------------IK---------- 175 (352)
Q Consensus 152 --------------~~~~~~l~~~Gi~~~~~------------~~~~~--------------------~~---------- 175 (352)
....+|+.++|++|... ..... ..
T Consensus 119 ~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~~g~e~~~~~~~~~~~~~r~~~~~~~~~~~g~~ 198 (510)
T 4at0_A 119 GADEEKITDYCEGSVEHYNWLVDCGVPFKESFWGEPGWEPPFDDGLMYSGGENAAPFNEIAAPAPRGHVPQMDGKRTGEK 198 (510)
T ss_dssp SCCHHHHHHHHHTHHHHHHHHHHTTCCCCSCEECSSSSSCSSSCSEECCSSTTSTTGGGTSCCCCCEECCCCSSCBTTTB
T ss_pred CCCHHHHHHHHHhhHHHHHHHHHcCCeecccccCCcccccCCcccccccCcccccccccccCcccceeeecccccccccC
Confidence 01246778888877542 00000 00
Q ss_pred ch-HHHHHHHHHHHHcCCCcEEEccceeEEEEEe-CCEEEEEEEcccceeccCCCCCCCCCeEEEeC-EEEEccCCCC
Q 039605 176 HA-ALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GNRVGGIVTNWALVSMNHDSQSCMDPNVMEAK-VVVSSCGHDG 250 (352)
Q Consensus 176 ~~-~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~-~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~-~VIlAtG~~~ 250 (352)
.. ..+...|.+.+.+ .|++++++++|++|+.+ +++|+||.+..+ ++..+|+|+ .||+|||+++
T Consensus 199 ~g~~~l~~~L~~~~~~-~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~-----------g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 199 GGGYMLMKPLVETAEK-LGVRAEYDMRVQTLVTDDTGRVVGIVAKQY-----------GKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp CTTHHHHHHHHHHHHH-TTCEEECSEEEEEEEECTTCCEEEEEEEET-----------TEEEEEEEEEEEEECCCCCT
T ss_pred CCHHHHHHHHHHHHHH-cCCEEEecCEeEEEEECCCCcEEEEEEEEC-----------CcEEEEEeCCeEEEeCCChh
Confidence 01 2667778887764 59999999999999998 689999987531 124579995 9999999987
No 18
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.52 E-value=1.2e-13 Score=139.26 Aligned_cols=135 Identities=21% Similarity=0.273 Sum_probs=98.4
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCccee-------e---------------------------
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSV-------V--------------------------- 150 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~-------~--------------------------- 150 (352)
.++||||||||++|+++|+.|+++ |++|+||||.+..||..... .
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~-G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~ 203 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDS-GAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNI 203 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC-CCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCC
Confidence 468999999999999999999999 99999999998877541100 0
Q ss_pred c------------chHHHHHHHcCCcccc---C-C-CeE--EE-----echHHHHHHHHHHHHcCCCcEEEccceeEEEE
Q 039605 151 R------------KPAHLFLDELGIDYDE---Q-D-NYV--VI-----KHAALFTSTIMSKLLARPNVKLFNAVAAEDLI 206 (352)
Q Consensus 151 ~------------~~~~~~l~~~Gi~~~~---~-~-~~~--~~-----~~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~ 206 (352)
. ....+|+.++|+++.. . + .+. .. .....+...|.+.+. +.|++++++++|++|+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~-~~gv~i~~~~~v~~l~ 282 (571)
T 1y0p_A 204 NDPALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAV-KRNIDLRMNTRGIEVL 282 (571)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHH-HTTCEEESSEEEEEEE
T ss_pred CCHHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHH-hcCCEEEeCCEeeEeE
Confidence 0 0124677788888742 0 1 011 11 123566777777776 4699999999999999
Q ss_pred EeC-CEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCC
Q 039605 207 VKG-NRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGP 251 (352)
Q Consensus 207 ~~~-g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~ 251 (352)
.++ ++++|+.+.+. +|+..+|+||.||+|||+++.
T Consensus 283 ~~~~g~v~Gv~~~~~----------~g~~~~i~a~~VVlAtGg~~~ 318 (571)
T 1y0p_A 283 KDDKGTVKGILVKGM----------YKGYYWVKADAVILATGGFAK 318 (571)
T ss_dssp ECTTSCEEEEEEEET----------TTEEEEEECSEEEECCCCCTT
T ss_pred EcCCCeEEEEEEEeC----------CCcEEEEECCeEEEeCCCccc
Confidence 987 89998887420 123457999999999999763
No 19
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.52 E-value=2.2e-13 Score=126.65 Aligned_cols=115 Identities=19% Similarity=0.224 Sum_probs=78.0
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHH
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIM 185 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~ 185 (352)
.+||+|||||++|+++|+.|++. |++|+|||+.+..||.+...+. +........+.. ....++...+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~~~gG~~~~~~~----------~~~~~~~~~~~~-~~~~~~~~~~~ 74 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMR-QASVKIIESLPQLGGQLSALYP----------EKYIYDVAGFPK-IRAQELINNLK 74 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCHHHHHHCT----------TSEECCSTTCSS-EEHHHHHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHC-CCCEEEEEcCCCCCceehhcCC----------CceEeccCCCCC-CCHHHHHHHHH
Confidence 57999999999999999999999 9999999999888764211000 000000001110 12456666666
Q ss_pred HHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCC
Q 039605 186 SKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGH 248 (352)
Q Consensus 186 ~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~ 248 (352)
+.+. +.+++++++++|.++..+++..+.+.+.+ .++.+|.||+|||.
T Consensus 75 ~~~~-~~~~~~~~~~~v~~i~~~~~~~~~v~~~~---------------g~~~~d~vVlAtG~ 121 (332)
T 3lzw_A 75 EQMA-KFDQTICLEQAVESVEKQADGVFKLVTNE---------------ETHYSKTVIITAGN 121 (332)
T ss_dssp HHHT-TSCCEEECSCCEEEEEECTTSCEEEEESS---------------EEEEEEEEEECCTT
T ss_pred HHHH-HhCCcEEccCEEEEEEECCCCcEEEEECC---------------CEEEeCEEEECCCC
Confidence 6554 56999999999999988765223344432 24888899999987
No 20
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.52 E-value=6.4e-14 Score=141.05 Aligned_cols=136 Identities=23% Similarity=0.261 Sum_probs=99.2
Q ss_pred CCCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCccee-------e--------------------------
Q 039605 104 HADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSV-------V-------------------------- 150 (352)
Q Consensus 104 ~~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~-------~-------------------------- 150 (352)
..++||||||+|++|+++|+.|+++ |++|+||||.+..||..... .
T Consensus 119 ~~~~DVvVVG~G~aGl~aA~~la~~-G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~ 197 (566)
T 1qo8_A 119 SETTQVLVVGAGSAGFNASLAAKKA-GANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQ 197 (566)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHH-TCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHC-CCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCC
Confidence 3478999999999999999999999 99999999998776541100 0
Q ss_pred -c------------chHHHHHHHcCCccccC----C-CeE--EE-----echHHHHHHHHHHHHcCCCcEEEccceeEEE
Q 039605 151 -R------------KPAHLFLDELGIDYDEQ----D-NYV--VI-----KHAALFTSTIMSKLLARPNVKLFNAVAAEDL 205 (352)
Q Consensus 151 -~------------~~~~~~l~~~Gi~~~~~----~-~~~--~~-----~~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l 205 (352)
. ....+|+.++|+++... + .+. .. .....+...|.+.+. +.|++++++++|++|
T Consensus 198 ~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~-~~gv~i~~~~~v~~l 276 (566)
T 1qo8_A 198 QNDIKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAK-EQGIDTRLNSRVVKL 276 (566)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHH-HTTCCEECSEEEEEE
T ss_pred CCCHHHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHH-hcCCEEEeCCEEEEE
Confidence 0 01246777888887521 1 111 11 124567777777776 469999999999999
Q ss_pred EEeC-CEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCC
Q 039605 206 IVKG-NRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGP 251 (352)
Q Consensus 206 ~~~~-g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~ 251 (352)
+.++ ++++|+.+.+. +|+..+|+||.||+|||+++.
T Consensus 277 ~~~~~g~v~Gv~~~~~----------~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 277 VVNDDHSVVGAVVHGK----------HTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp EECTTSBEEEEEEEET----------TTEEEEEEEEEEEECCCCCTT
T ss_pred EECCCCcEEEEEEEeC----------CCcEEEEEcCEEEEecCCccc
Confidence 9988 89999887420 113357999999999999874
No 21
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.51 E-value=7.3e-14 Score=135.42 Aligned_cols=128 Identities=21% Similarity=0.352 Sum_probs=93.7
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCC--------cceee------------------------cc
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGA--------SGSVV------------------------RK 152 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~--------~~~~~------------------------~~ 152 (352)
.++||+|||||++|+++|+.|+++ |++|+|||+.+.+|+. +.... ..
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~-G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~ 104 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKR-GRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQ 104 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHH
Confidence 478999999999999999999999 9999999999876532 11000 01
Q ss_pred hHHHHHHHcCCccccC--CCeEEEechHHHHHHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCC
Q 039605 153 PAHLFLDELGIDYDEQ--DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQS 230 (352)
Q Consensus 153 ~~~~~l~~~Gi~~~~~--~~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~ 230 (352)
...+|++..|+++... +.........++.+.|.+.+. +.|++++++++|+++..+++.+ .+.+.+
T Consensus 105 ~~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~-~~Gv~i~~~~~V~~i~~~~~~~-~V~~~~----------- 171 (417)
T 3v76_A 105 DFVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMK-EAGVQLRLETSIGEVERTASGF-RVTTSA----------- 171 (417)
T ss_dssp HHHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHH-HHTCEEECSCCEEEEEEETTEE-EEEETT-----------
T ss_pred HHHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHH-HCCCEEEECCEEEEEEEeCCEE-EEEECC-----------
Confidence 2346778888876543 222223345577777777776 4699999999999999887754 455432
Q ss_pred CCCCeEEEeCEEEEccCCCC
Q 039605 231 CMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 231 ~g~~~~i~A~~VIlAtG~~~ 250 (352)
.+++||.||+|+|+++
T Consensus 172 ----g~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 172 ----GTVDAASLVVASGGKS 187 (417)
T ss_dssp ----EEEEESEEEECCCCSS
T ss_pred ----cEEEeeEEEECCCCcc
Confidence 2799999999999987
No 22
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.51 E-value=2.1e-13 Score=134.91 Aligned_cols=119 Identities=12% Similarity=0.140 Sum_probs=78.7
Q ss_pred HHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCcc
Q 039605 182 STIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMK 261 (352)
Q Consensus 182 ~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~ 261 (352)
+.+.+.+. +.|++++.++++.++..+++.+. +.+.+ .. +|+..++.+|.||+|+|..+.....+. ...
T Consensus 243 ~~l~~~l~-~~gV~v~~~~~v~~i~~~~~~~~-v~~~~------~~---~g~~~~i~~D~Vi~a~G~~p~~~~l~l-~~~ 310 (491)
T 3urh_A 243 KQLQRMLT-KQGIDFKLGAKVTGAVKSGDGAK-VTFEP------VK---GGEATTLDAEVVLIATGRKPSTDGLGL-AKA 310 (491)
T ss_dssp HHHHHHHH-HTTCEEECSEEEEEEEEETTEEE-EEEEE------TT---SCCCEEEEESEEEECCCCEECCTTSCH-HHH
T ss_pred HHHHHHHH-hCCCEEEECCeEEEEEEeCCEEE-EEEEe------cC---CCceEEEEcCEEEEeeCCccCCCccCc-hhc
Confidence 34444444 57999999999999988777553 44422 01 123468999999999996544322111 111
Q ss_pred ccccc-cccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHH
Q 039605 262 ALDMN-TAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 319 (352)
Q Consensus 262 ~~~~~-~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~ 319 (352)
++..+ .+...+.+++++..|++|++||+... + .....+..+|+.||..|..
T Consensus 311 g~~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~----~---~~~~~A~~~g~~aa~~i~g 362 (491)
T 3urh_A 311 GVVLDSRGRVEIDRHFQTSIAGVYAIGDVVRG----P---MLAHKAEDEGVAVAEIIAG 362 (491)
T ss_dssp TCCBCTTSCBCCCTTCBCSSTTEEECGGGSSS----C---CCHHHHHHHHHHHHHHHTT
T ss_pred CceECCCCCEeECCCCCCCCCCEEEEEecCCC----c---cchhHHHHHHHHHHHHHcC
Confidence 23333 45566678888999999999999742 2 2344567899999998875
No 23
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.49 E-value=2.1e-13 Score=134.63 Aligned_cols=122 Identities=7% Similarity=0.030 Sum_probs=78.9
Q ss_pred HHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCcc
Q 039605 182 STIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMK 261 (352)
Q Consensus 182 ~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~ 261 (352)
+.+.+.+. +.|+++++++.+.++..+++....+.+.++ ..++..++.+|.||+|+|..+.....++ ...
T Consensus 231 ~~l~~~l~-~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~---------~~~~~~~~~~D~vi~a~G~~p~~~~l~l-~~~ 299 (483)
T 3dgh_A 231 ELVAASME-ERGIPFLRKTVPLSVEKQDDGKLLVKYKNV---------ETGEESEDVYDTVLWAIGRKGLVDDLNL-PNA 299 (483)
T ss_dssp HHHHHHHH-HTTCCEEETEEEEEEEECTTSCEEEEEEET---------TTCCEEEEEESEEEECSCEEECCGGGTG-GGT
T ss_pred HHHHHHHH-hCCCEEEeCCEEEEEEEcCCCcEEEEEecC---------CCCceeEEEcCEEEECcccccCcCcCCc-hhc
Confidence 34444444 679999999999999876543223554332 1123458999999999996543322111 122
Q ss_pred ccccccccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHH
Q 039605 262 ALDMNTAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKS 320 (352)
Q Consensus 262 ~~~~~~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~ 320 (352)
++..+.+.+.+.+++++..|++|++||+... .++ ....+..+|+.||+.|+..
T Consensus 300 gl~~~~G~i~vd~~~~t~~~~IyA~GD~~~~---~~~---~~~~A~~~g~~aa~~i~g~ 352 (483)
T 3dgh_A 300 GVTVQKDKIPVDSQEATNVANIYAVGDIIYG---KPE---LTPVAVLAGRLLARRLYGG 352 (483)
T ss_dssp TCCCBTTBBCCCTTCBCSSTTEEECSTTBTT---SCC---CHHHHHHHHHHHHHHHHSC
T ss_pred CccccCCEEEECcCCccCCCCEEEEEcccCC---CCc---cHHHHHHHHHHHHHHHcCC
Confidence 3344446666778888999999999999742 122 2334578899999998743
No 24
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.49 E-value=3.4e-13 Score=134.07 Aligned_cols=135 Identities=16% Similarity=0.215 Sum_probs=94.4
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHH-HHHHHcCC---------cccc------C
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAH-LFLDELGI---------DYDE------Q 168 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~-~~l~~~Gi---------~~~~------~ 168 (352)
.++||+|||||++|+++|+.|+++ |++|+|||+...........+..... ..++.+|+ .... .
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~-G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~ 84 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMR-GHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWG 84 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTT-TCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECS
T ss_pred ccCCEEEECcCHHHHHHHHHHHhC-CCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEec
Confidence 368999999999999999999999 99999999987544332222222111 13333333 1110 0
Q ss_pred -----------------CCeEEEechHHHHHHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCC
Q 039605 169 -----------------DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSC 231 (352)
Q Consensus 169 -----------------~~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~ 231 (352)
..+....+...+.+.|.+.+.+ .|++++++++|+++..+++++.++.+.. .+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~-~Gv~i~~~~~V~~v~~~~~~v~gv~~~~----------~d 153 (512)
T 3e1t_A 85 KEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSER-KGVDVRERHEVIDVLFEGERAVGVRYRN----------TE 153 (512)
T ss_dssp SCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHH-TTCEEESSCEEEEEEEETTEEEEEEEEC----------SS
T ss_pred CCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHh-CCCEEEcCCEEEEEEEECCEEEEEEEEe----------CC
Confidence 0112234456777888877764 7999999999999999999988887743 11
Q ss_pred CCCeEEEeCEEEEccCCCCC
Q 039605 232 MDPNVMEAKVVVSSCGHDGP 251 (352)
Q Consensus 232 g~~~~i~A~~VIlAtG~~~~ 251 (352)
|+..+++||.||+|+|.++.
T Consensus 154 G~~~~i~ad~VI~AdG~~S~ 173 (512)
T 3e1t_A 154 GVELMAHARFIVDASGNRTR 173 (512)
T ss_dssp SCEEEEEEEEEEECCCTTCS
T ss_pred CCEEEEEcCEEEECCCcchH
Confidence 23368999999999999763
No 25
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.48 E-value=3.3e-13 Score=128.88 Aligned_cols=131 Identities=19% Similarity=0.241 Sum_probs=95.0
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCcccc---------------CCC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDE---------------QDN 170 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~---------------~~~ 170 (352)
++||+|||||++|+++|+.|+++ |++|+|||+....|+...... ....++++++|+.... .+.
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~-G~~V~l~E~~~~~g~~~~~~~-~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~ 81 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKY-GLKTLMIEKRPEIGSPVRCGE-GLSKGILNEADIKADRSFIANEVKGARIYGPSEK 81 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSTTCSCCSCC-EEETHHHHHTTCCCCTTTEEEEESEEEEECTTCS
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCCCCCCCccccc-ccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCC
Confidence 58999999999999999999999 999999999986665311110 1122456666653210 000
Q ss_pred -------------eEEEechHHHHHHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEE
Q 039605 171 -------------YVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVM 237 (352)
Q Consensus 171 -------------~~~~~~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i 237 (352)
+....+...+.+.|.+.+.+ .|++++++++|+++..+++++.+|.+... ++..++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~gv~i~~~~~v~~i~~~~~~v~gv~~~~~-----------~~~~~~ 149 (397)
T 3cgv_A 82 RPIILQSEKAGNEVGYVLERDKFDKHLAALAAK-AGADVWVKSPALGVIKENGKVAGAKIRHN-----------NEIVDV 149 (397)
T ss_dssp SCEEEC-----CCCEEEECHHHHHHHHHHHHHH-HTCEEESSCCEEEEEEETTEEEEEEEEET-----------TEEEEE
T ss_pred EEEEEeccccCCceeEEEeHHHHHHHHHHHHHh-CCCEEEECCEEEEEEEeCCEEEEEEEEEC-----------CeEEEE
Confidence 12233455677777777764 69999999999999999999888877421 124689
Q ss_pred EeCEEEEccCCCC
Q 039605 238 EAKVVVSSCGHDG 250 (352)
Q Consensus 238 ~A~~VIlAtG~~~ 250 (352)
+||.||+|+|.++
T Consensus 150 ~a~~vV~A~G~~s 162 (397)
T 3cgv_A 150 RAKMVIAADGFES 162 (397)
T ss_dssp EEEEEEECCCTTC
T ss_pred EcCEEEECCCcch
Confidence 9999999999876
No 26
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.48 E-value=1.9e-13 Score=138.60 Aligned_cols=135 Identities=21% Similarity=0.313 Sum_probs=97.6
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCC-------cceeec--------------------------
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGA-------SGSVVR-------------------------- 151 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~-------~~~~~~-------------------------- 151 (352)
.++||||||+|++|++||+.|++. |++|+||||....++. ....+.
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~-G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~ds~~~~~~dtl~~g~~l~d~~~ 95 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEA-GFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNWRWHFYDTVKGSDWLGDQDA 95 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHH
T ss_pred ccCCEEEECccHHHHHHHHHHHHC-CCcEEEEeccCCCCCCchhhCCCcEecCCCCCCCCHHHHHHHHHHhcCCCCCHHH
Confidence 368999999999999999999999 9999999997643322 110000
Q ss_pred --------chHHHHHHHcCCccccCC--CeEE------------------Ee-----chHHHHHHHHHHHHcCCCcEEEc
Q 039605 152 --------KPAHLFLDELGIDYDEQD--NYVV------------------IK-----HAALFTSTIMSKLLARPNVKLFN 198 (352)
Q Consensus 152 --------~~~~~~l~~~Gi~~~~~~--~~~~------------------~~-----~~~~~~~~L~~~~~~~~gv~i~~ 198 (352)
...++||.++|++|+... .+.. .. ....+...|++++. +.|+++++
T Consensus 96 v~~l~~~s~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~s~~~g~~~~~~R~~~~~d~tG~~l~~~L~~~~~-~~gv~i~~ 174 (621)
T 2h88_A 96 IHYMTEQAPAAVIELENYGMPFSRTEEGKIYQRAFGGQSLQFGKGGQAHRCCCVADRTGHSLLHTLYGRSL-RYDTSYFV 174 (621)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTTSCBCCCEECSTTCHHHHHHHHHHHHHT-TSCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCcccCCCCceeccccCcccccccCCCcceeEEEecCCCHHHHHHHHHHHHH-hCCCEEEE
Confidence 012467888999886431 1111 11 13356677777776 57999999
Q ss_pred cceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 199 AVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 199 ~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
++.+++|+.++++|.|+.+.+ ..+ |+...|.|+.||+|||+++
T Consensus 175 ~~~v~~Li~~~g~v~Gv~~~~------~~~---G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 175 EYFALDLLMENGECRGVIALC------IED---GTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp TEEEEEEEEETTEEEEEEEEE------TTT---CCEEEEEEEEEEECCCCCG
T ss_pred ceEEEEEEEECCEEEEEEEEE------cCC---CcEEEEEcCeEEECCCccc
Confidence 999999999989999988742 111 2346899999999999876
No 27
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.47 E-value=6e-13 Score=128.35 Aligned_cols=131 Identities=23% Similarity=0.249 Sum_probs=91.6
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCc---------cc------cC--
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGID---------YD------EQ-- 168 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~---------~~------~~-- 168 (352)
++||+|||||++|+++|+.|+++ |++|+|||+...+....+..+.......++.+|+. .. +.
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~-G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 83 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKS-GFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGKE 83 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT-TCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETTE
T ss_pred cCcEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCCe
Confidence 58999999999999999999999 99999999987554333333444444555554431 11 00
Q ss_pred -------------CCeEEEechHHHHHHHHHHHHcCCCcEEEccceeEEEEEeCCEEE-EEEEcccceeccCCCCCCCCC
Q 039605 169 -------------DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVG-GIVTNWALVSMNHDSQSCMDP 234 (352)
Q Consensus 169 -------------~~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~-gv~~~~g~~~~~~~~~~~g~~ 234 (352)
..+....+...+.+.|.+.+.+ .|++++++++|+++..+++++. .+...+ |+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~-~gv~i~~~~~v~~i~~~~~~~~v~v~~~~------------g~~ 150 (421)
T 3nix_A 84 IADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAAR-QGVDVEYEVGVTDIKFFGTDSVTTIEDIN------------GNK 150 (421)
T ss_dssp EEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHH-HTCEEECSEEEEEEEEETTEEEEEEEETT------------SCE
T ss_pred eEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHh-CCCEEEcCCEEEEEEEeCCEEEEEEEcCC------------CCE
Confidence 1112234456777888877764 5999999999999998876542 333322 133
Q ss_pred eEEEeCEEEEccCCCC
Q 039605 235 NVMEAKVVVSSCGHDG 250 (352)
Q Consensus 235 ~~i~A~~VIlAtG~~~ 250 (352)
.+++||.||+|+|.++
T Consensus 151 ~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 151 REIEARFIIDASGYGR 166 (421)
T ss_dssp EEEEEEEEEECCGGGC
T ss_pred EEEEcCEEEECCCCch
Confidence 4799999999999875
No 28
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.46 E-value=3.7e-13 Score=129.80 Aligned_cols=127 Identities=18% Similarity=0.215 Sum_probs=91.8
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCC--------Cccee---------ec---------------ch
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGG--------ASGSV---------VR---------------KP 153 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG--------~~~~~---------~~---------------~~ 153 (352)
++||+|||||++|+++|+.|+++ |++|+||||++.+|+ .++.. +. ..
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~-G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKL-GKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWD 82 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhC-CCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHH
Confidence 58999999999999999999999 999999999986642 11100 00 01
Q ss_pred HHHHHHHcCCccccCCCeEEEe--chHHHHHHHHHHHHcCCCcEEEccceeEEEEEe----CCEEEEEEEcccceeccCC
Q 039605 154 AHLFLDELGIDYDEQDNYVVIK--HAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK----GNRVGGIVTNWALVSMNHD 227 (352)
Q Consensus 154 ~~~~l~~~Gi~~~~~~~~~~~~--~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~----~g~v~gv~~~~g~~~~~~~ 227 (352)
..+|++++|+++.....-.... ...++.+.|.+.+. +.|+++++++.++++..+ ++++ .+.+.+
T Consensus 83 ~~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~-~~Gv~i~~~~~v~~i~~~~~g~~~~~-~v~~~~-------- 152 (401)
T 2gqf_A 83 FISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECD-KYGAKILLRSEVSQVERIQNDEKVRF-VLQVNS-------- 152 (401)
T ss_dssp HHHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHH-HHTCEEECSCCEEEEEECCSCSSCCE-EEEETT--------
T ss_pred HHHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHH-HCCCEEEeCCEEEEEEcccCcCCCeE-EEEECC--------
Confidence 3567788898875432111112 45667777777776 569999999999999876 4543 454422
Q ss_pred CCCCCCCeEEEeCEEEEccCCCC
Q 039605 228 SQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 228 ~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
.+++||.||+|+|+++
T Consensus 153 -------g~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 153 -------TQWQCKNLIVATGGLS 168 (401)
T ss_dssp -------EEEEESEEEECCCCSS
T ss_pred -------CEEECCEEEECCCCcc
Confidence 2799999999999987
No 29
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.46 E-value=5.6e-13 Score=127.91 Aligned_cols=132 Identities=16% Similarity=0.260 Sum_probs=93.1
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCC-CCcceeecchHHHHHHHcCCccc---------------cC
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPG-GASGSVVRKPAHLFLDELGIDYD---------------EQ 168 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~G-G~~~~~~~~~~~~~l~~~Gi~~~---------------~~ 168 (352)
.++||+|||||++|+++|+.|++. |++|+||||.+... .+....+.....+.++++|+.-. ..
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~-G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQ-GHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHD 83 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEET
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC-CCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCC
Confidence 358999999999999999999999 99999999986552 12333444445555666554210 00
Q ss_pred C--------------CeEEEechHHHHHHHHHHHHcCCCcEEEccceeEEEEEeCCEEE-EEEEcccceeccCCCCCCCC
Q 039605 169 D--------------NYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVG-GIVTNWALVSMNHDSQSCMD 233 (352)
Q Consensus 169 ~--------------~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~-gv~~~~g~~~~~~~~~~~g~ 233 (352)
+ .+....+...+.+.|.+.+.+.+|++++++++++++..++++++ .+.+.+|
T Consensus 84 g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g------------- 150 (399)
T 2x3n_A 84 GELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDG------------- 150 (399)
T ss_dssp TEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTS-------------
T ss_pred CCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCC-------------
Confidence 0 01123345677788888876444999999999999998877653 4555332
Q ss_pred CeEEEeCEEEEccCCCCC
Q 039605 234 PNVMEAKVVVSSCGHDGP 251 (352)
Q Consensus 234 ~~~i~A~~VIlAtG~~~~ 251 (352)
.++++|.||+|+|.++.
T Consensus 151 -~~~~ad~vV~AdG~~s~ 167 (399)
T 2x3n_A 151 -RVLRPRVVVGADGIASY 167 (399)
T ss_dssp -CEEEEEEEEECCCTTCH
T ss_pred -CEEECCEEEECCCCChH
Confidence 47999999999998873
No 30
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.46 E-value=1.7e-12 Score=120.28 Aligned_cols=168 Identities=17% Similarity=0.169 Sum_probs=118.0
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
-.|+|||+|..|+-+|..|++. |.+|+++++.+.... ...+.+.+.+
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~-g~~Vtlv~~~~~~~~--------------------------------~~~~~~~l~~ 192 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNI-ASEVHLIHRRDGFRA--------------------------------EKILIKRLMD 192 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTT-SSEEEEECSSSSCCC--------------------------------CHHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhc-CCeEEEEEeCCcccc--------------------------------CHHHHHHHHH
Confidence 4799999999999999999999 999999998764310 1233344445
Q ss_pred HHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCccccccc
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDMN 266 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~~ 266 (352)
.+. +.|+++++++.+.++..+++++.++.+.+. .+ .++..++.+|.||+|+|..+..... . ..+..+
T Consensus 193 ~l~-~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~------~~--~g~~~~i~~D~vv~a~G~~p~~~~~---~-~~l~~~ 259 (320)
T 1trb_A 193 KVE-NGNIILHTNRTLEEVTGDQMGVTGVRLRDT------QN--SDNIESLDVAGLFVAIGHSPNTAIF---E-GQLELE 259 (320)
T ss_dssp HHH-TSSEEEECSCEEEEEEECSSSEEEEEEECC------TT--CCCCEEEECSEEEECSCEEESCGGG---T-TTSCEE
T ss_pred hcc-cCCeEEEcCceeEEEEcCCCceEEEEEEec------cC--CCceEEEEcCEEEEEeCCCCChHHh---c-cccccc
Confidence 554 679999999999999887777777777431 00 0234689999999999965443221 1 123333
Q ss_pred cccceeeccc-----ccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHHcCCCCC
Q 039605 267 TAEDAIVKLT-----REIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNA 326 (352)
Q Consensus 267 ~g~~~vv~~~-----~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~l~~~~~ 326 (352)
.+...+.+++ .+..|++|++||+.... ++ ....++.+|..||..|.++|.+.+.
T Consensus 260 ~G~i~vd~~~~~~~~~t~~~~vya~GD~~~~~---~~---~~~~A~~~g~~aa~~i~~~l~~~~~ 318 (320)
T 1trb_A 260 NGYIKVQSGIHGNATQTSIPGVFAAGDVMDHI---YR---QAITSAGTGCMAALDAERYLDGLAD 318 (320)
T ss_dssp TTEECCCCSSSSCTTBCSSTTEEECGGGGCSS---SC---CHHHHHHHHHHHHHHHHHHHTC---
T ss_pred CceEEECCCcccccccCCCCCEEEcccccCCc---ch---hhhhhhccHHHHHHHHHHHHHhccc
Confidence 4554444554 67899999999998632 12 2345578999999999999987654
No 31
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.44 E-value=6.7e-13 Score=134.05 Aligned_cols=134 Identities=16% Similarity=0.226 Sum_probs=98.0
Q ss_pred CCCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCc---------cc------cC
Q 039605 104 HADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGID---------YD------EQ 168 (352)
Q Consensus 104 ~~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~---------~~------~~ 168 (352)
|.++||+|||||++|+++|+.|++. |++|+|||+...++......+.......++.+|+. .. +.
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~-G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 99 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKL-GHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWG 99 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcC-CCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEec
Confidence 3478999999999999999999999 99999999987665554445555556666666651 00 00
Q ss_pred -------------------CCeEEEechHHHHHHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCC
Q 039605 169 -------------------DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQ 229 (352)
Q Consensus 169 -------------------~~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~ 229 (352)
..+....+...+...|.+.+. +.|++++++++|+++..+++++++|.+.++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~-~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~--------- 169 (591)
T 3i3l_A 100 QDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEAR-SRGITVHEETPVTDVDLSDPDRVVLTVRRG--------- 169 (591)
T ss_dssp SSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHH-HTTCEEETTCCEEEEECCSTTCEEEEEEET---------
T ss_pred CCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHH-hCCCEEEeCCEEEEEEEcCCCEEEEEEecC---------
Confidence 011223345667777777776 479999999999999987666667776421
Q ss_pred CCCCCeEEEeCEEEEccCCCC
Q 039605 230 SCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 230 ~~g~~~~i~A~~VIlAtG~~~ 250 (352)
|+..+++||.||+|+|.++
T Consensus 170 --G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 170 --GESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp --TEEEEEEESEEEECCGGGC
T ss_pred --CceEEEEcCEEEECCCCcc
Confidence 1236899999999999876
No 32
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.44 E-value=5.5e-13 Score=135.07 Aligned_cols=136 Identities=22% Similarity=0.283 Sum_probs=95.8
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCC--CcEEEEeccCCCCC-------Ccceee--------------------c----
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPN--VQVAIIEQSVSPGG-------ASGSVV--------------------R---- 151 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G--~kV~viEk~~~~GG-------~~~~~~--------------------~---- 151 (352)
.++||||||||++|+++|+.|++. | ++|+||||....++ +....+ .
T Consensus 4 ~~~DVvIVG~G~AGl~aAl~la~~-G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~ 82 (602)
T 1kf6_A 4 FQADLAIVGAGGAGLRAAIAAAQA-NPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDV 82 (602)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHH-CTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHhc-CCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHH
Confidence 368999999999999999999999 9 99999999754332 111000 0
Q ss_pred --------chHHHHHHHcCCccccCC--CeE----------EEec-----hHHHHHHHHHHHHcCCCcEEEccceeEEEE
Q 039605 152 --------KPAHLFLDELGIDYDEQD--NYV----------VIKH-----AALFTSTIMSKLLARPNVKLFNAVAAEDLI 206 (352)
Q Consensus 152 --------~~~~~~l~~~Gi~~~~~~--~~~----------~~~~-----~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~ 206 (352)
...++||.++|++|+... .+. ...+ ...+...|.+.+.+..++++++++.+++|+
T Consensus 83 v~~~~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~~~v~~l~ 162 (602)
T 1kf6_A 83 VDYFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDIL 162 (602)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEETEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeCCEEEEEE
Confidence 013467788899886431 110 0111 346677888877644339999999999999
Q ss_pred EeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 207 VKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 207 ~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
.++++|.|+.+.+ ..+ |+...|.|+.||+|||+++
T Consensus 163 ~~~g~v~Gv~~~~------~~~---G~~~~i~A~~VVlAtGg~s 197 (602)
T 1kf6_A 163 VDDGHVRGLVAMN------MME---GTLVQIRANAVVMATGGAG 197 (602)
T ss_dssp EETTEEEEEEEEE------TTT---TEEEEEECSCEEECCCCCG
T ss_pred EeCCEEEEEEEEE------cCC---CcEEEEEcCeEEECCCCCc
Confidence 9989998887532 111 1335799999999999875
No 33
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.44 E-value=8.9e-13 Score=124.27 Aligned_cols=132 Identities=17% Similarity=0.202 Sum_probs=86.1
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCC-cce---ee------cc-------------hHHHHHHHcC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGA-SGS---VV------RK-------------PAHLFLDELG 162 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~-~~~---~~------~~-------------~~~~~l~~~G 162 (352)
++||+|||||++|+++|+.|+++ |++|+||||.+.++++ ... .+ .. ...++.++++
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~~-G~~V~vlE~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAAG-GHEVLVAEAAEGIGTGTSSRNSEVIHAGIYYPADSLKARLCVRGKHLLYEYCAARG 82 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSSCSTTSSSCCEECCCCSSCTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCCCCCccCcCCccccccCccCCCCCHhHHHHHHHHHHHHHHHHHcC
Confidence 68999999999999999999999 9999999998644422 100 00 00 0011122222
Q ss_pred CccccCCC---------------------------eE-------------------------EEechHHHHHHHHHHHHc
Q 039605 163 IDYDEQDN---------------------------YV-------------------------VIKHAALFTSTIMSKLLA 190 (352)
Q Consensus 163 i~~~~~~~---------------------------~~-------------------------~~~~~~~~~~~L~~~~~~ 190 (352)
+++...+. +. ...+...+...|.+.+.
T Consensus 83 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~- 161 (369)
T 3dme_A 83 VPHQRLGKLIVATSDAEASQLDSIARRAGANGVDDLQHIDGAAARRLEPALHCTAALVSPSTGIVDSHALMLAYQGDAE- 161 (369)
T ss_dssp CCEECCCEEEEECSHHHHTTHHHHHHHHHHTTCCCCEEEEHHHHHHHCTTCCCSEEEEETTCEEECHHHHHHHHHHHHH-
T ss_pred CCcccCCEEEEecCHHHHHHHHHHHHHHHHcCCCceeecCHHHHHHhCCCceeeeeeECCCCEEECHHHHHHHHHHHHH-
Confidence 22211000 00 01234456677777776
Q ss_pred CCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCC
Q 039605 191 RPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGP 251 (352)
Q Consensus 191 ~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~ 251 (352)
+.|++++++++|+++..++++.+.+.+.++ +..+++||.||+|+|.++.
T Consensus 162 ~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g------------~~~~~~a~~VV~A~G~~s~ 210 (369)
T 3dme_A 162 SDGAQLVFHTPLIAGRVRPEGGFELDFGGA------------EPMTLSCRVLINAAGLHAP 210 (369)
T ss_dssp HTTCEEECSCCEEEEEECTTSSEEEEECTT------------SCEEEEEEEEEECCGGGHH
T ss_pred HCCCEEECCCEEEEEEEcCCceEEEEECCC------------ceeEEEeCEEEECCCcchH
Confidence 569999999999999998765334655332 3468999999999998863
No 34
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.44 E-value=4.9e-13 Score=133.55 Aligned_cols=118 Identities=12% Similarity=0.144 Sum_probs=76.2
Q ss_pred HHHHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCC
Q 039605 180 FTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRG 259 (352)
Q Consensus 180 ~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g 259 (352)
....+.+.+. +.|+++++++.+..+...++++. +.+.+ ..++.+|.|++|+|..+.....++.
T Consensus 265 i~~~l~~~l~-~~gi~~~~~~~v~~~~~~~~~~~-v~~~~--------------~~~~~~D~vLvAvGR~Pnt~~L~le- 327 (542)
T 4b1b_A 265 CAVKVKLYME-EQGVMFKNGILPKKLTKMDDKIL-VEFSD--------------KTSELYDTVLYAIGRKGDIDGLNLE- 327 (542)
T ss_dssp HHHHHHHHHH-HTTCEEEETCCEEEEEEETTEEE-EEETT--------------SCEEEESEEEECSCEEESCGGGCGG-
T ss_pred HHHHHHHHHH-hhcceeecceEEEEEEecCCeEE-EEEcC--------------CCeEEEEEEEEcccccCCccccCcc-
Confidence 4444444444 67999999999999998887653 44432 2578899999999965433221111
Q ss_pred ccccccc-ccc-ceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHH
Q 039605 260 MKALDMN-TAE-DAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKS 320 (352)
Q Consensus 260 ~~~~~~~-~g~-~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~ 320 (352)
..++..+ .+. +.+.++++++.|++|++||+.... + + ....+..+|+.+++.++..
T Consensus 328 ~~gv~~~~~~~~i~vd~~~~Ts~p~IyAiGDv~~~~---p-~--La~~A~~eg~~aa~~i~g~ 384 (542)
T 4b1b_A 328 SLNMNVNKSNNKIIADHLSCTNIPSIFAVGDVAENV---P-E--LAPVAIKAGEILARRLFKD 384 (542)
T ss_dssp GTTCCEETTTTEECCCTTSBCSSTTEEECTTSBTTC---C-C--CHHHHHHHHHHHHHHHHSC
T ss_pred cceeeecccCceEeccccccccCCCeEEeccccCCc---h-h--HHHHHHHHHHHHHHHHhcC
Confidence 1122222 223 244578889999999999997532 1 1 2234467789999888753
No 35
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.44 E-value=1.1e-12 Score=132.07 Aligned_cols=135 Identities=19% Similarity=0.291 Sum_probs=97.4
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCccee-------e---------------------------
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSV-------V--------------------------- 150 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~-------~--------------------------- 150 (352)
.++||+|||+|++|+++|+.|++. |++|+||||.+..||..... .
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~-g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~ 203 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDA-GAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNI 203 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSS-SCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHC-CCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCC
Confidence 368999999999999999999999 99999999998776541100 0
Q ss_pred c------------chHHHHHHHcCCccccC----C-CeE--EE-----echHHHHHHHHHHHHcCCCcEEEccceeEEEE
Q 039605 151 R------------KPAHLFLDELGIDYDEQ----D-NYV--VI-----KHAALFTSTIMSKLLARPNVKLFNAVAAEDLI 206 (352)
Q Consensus 151 ~------------~~~~~~l~~~Gi~~~~~----~-~~~--~~-----~~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~ 206 (352)
. ....+|+.++|+++... + .+. .. .....+...|.+.+. +.|+++++++++++|+
T Consensus 204 ~~~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~-~~gv~i~~~t~v~~l~ 282 (572)
T 1d4d_A 204 NDPELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAV-KRGTDIRLNSRVVRIL 282 (572)
T ss_dssp SCHHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHH-HTTCEEESSEEEEEEE
T ss_pred CCHHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHH-HcCCeEEecCEEEEEE
Confidence 0 01246777888887531 1 011 11 114466777777776 4699999999999999
Q ss_pred EeC-CEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCC
Q 039605 207 VKG-NRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGP 251 (352)
Q Consensus 207 ~~~-g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~ 251 (352)
.++ ++++||.+.+. +|+..+|.||.||+|||+++.
T Consensus 283 ~~~~g~v~GV~~~~~----------~G~~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 283 EDASGKVTGVLVKGE----------YTGYYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp EC--CCEEEEEEEET----------TTEEEEEECSEEEECCCCCTT
T ss_pred ECCCCeEEEEEEEeC----------CCcEEEEEcCEEEEeCCCCcc
Confidence 887 89999887420 123457999999999998863
No 36
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.44 E-value=4.8e-13 Score=135.18 Aligned_cols=135 Identities=21% Similarity=0.308 Sum_probs=96.1
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCC-------cceee----------------------c----
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGA-------SGSVV----------------------R---- 151 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~-------~~~~~----------------------~---- 151 (352)
.++||||||+|++|++||+.|++. |++|+||||....+|. ..... .
T Consensus 6 ~~~DVvVVGaG~AGl~AA~~la~~-G~~V~vlEK~~~~~g~s~~a~GGi~~~~~~~~~ds~~~~~~d~~~~g~~~~d~~~ 84 (588)
T 2wdq_A 6 REFDAVVIGAGGAGMRAALQISQS-GQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDA 84 (588)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHH
T ss_pred ccCCEEEECcCHHHHHHHHHHHHC-CCcEEEEecCCCCCCcchhhCCccEEcCCCCCCCCHHHHHHHHHHhcCCCCCHHH
Confidence 368999999999999999999999 9999999998654321 00000 0
Q ss_pred --------chHHHHHHHcCCccccCC--CeEE-----------------Eec-----hHHHHHHHHHHHHcCCCcEEEcc
Q 039605 152 --------KPAHLFLDELGIDYDEQD--NYVV-----------------IKH-----AALFTSTIMSKLLARPNVKLFNA 199 (352)
Q Consensus 152 --------~~~~~~l~~~Gi~~~~~~--~~~~-----------------~~~-----~~~~~~~L~~~~~~~~gv~i~~~ 199 (352)
....+|+.++|++|.... .+.. ..+ ...+...|.+++.+ .|++++++
T Consensus 85 v~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~g~~~~~~~~~~~r~~~~~d~~g~~l~~~L~~~~~~-~gv~i~~~ 163 (588)
T 2wdq_A 85 IEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLK-NHTTIFSE 163 (588)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTCSBCCCEECSTTCHHHHHHHHHHHHHHH-TTCEEEET
T ss_pred HHHHHHhHHHHHHHHHHcCCCcccCCCCcEeeeecCCccccccccCcceEEEcCCCCHHHHHHHHHHHHHh-CCCEEEeC
Confidence 012467788898886431 1111 111 24566778887774 59999999
Q ss_pred ceeEEEEEe-CCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 200 VAAEDLIVK-GNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 200 t~v~~l~~~-~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
+.|++|+.+ ++++.|+.+.+ ..+ ++..+|.|+.||+|||+++
T Consensus 164 ~~v~~L~~~~~g~v~Gv~~~~------~~~---g~~~~i~A~~VVlAtGg~~ 206 (588)
T 2wdq_A 164 WYALDLVKNQDGAVVGCTALC------IET---GEVVYFKARATVLATGGAG 206 (588)
T ss_dssp EEEEEEEECTTSCEEEEEEEE------TTT---CCEEEEEEEEEEECCCCCG
T ss_pred cEEEEEEECCCCEEEEEEEEE------cCC---CeEEEEEcCEEEECCCCCc
Confidence 999999996 78899988632 111 2345799999999999965
No 37
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.44 E-value=8.9e-13 Score=120.59 Aligned_cols=111 Identities=14% Similarity=0.167 Sum_probs=75.2
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHH
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIM 185 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~ 185 (352)
.+||+|||||++|+++|+.|++. |++|+|||+....+...... .+++ ... .....++...+.
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~~~~~~~~~~-----------~~~~--~~~----~~~~~~~~~~~~ 63 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRA-RKNILLVDAGERRNRFASHS-----------HGFL--GQD----GKAPGEIIAEAR 63 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCCCGGGGCSCC-----------CSST--TCT----TCCHHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCCcccccchhh-----------cCCc--CCC----CCCHHHHHHHHH
Confidence 47999999999999999999999 99999999875332110000 0000 000 112456667777
Q ss_pred HHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 186 SKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 186 ~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
+.+.+..+++++.. +++.+..+++.+ .+.+.+ ..++.+|.||+|+|..+
T Consensus 64 ~~~~~~~~v~~~~~-~v~~i~~~~~~~-~v~~~~--------------g~~~~~d~vviAtG~~~ 112 (297)
T 3fbs_A 64 RQIERYPTIHWVEG-RVTDAKGSFGEF-IVEIDG--------------GRRETAGRLILAMGVTD 112 (297)
T ss_dssp HHHTTCTTEEEEES-CEEEEEEETTEE-EEEETT--------------SCEEEEEEEEECCCCEE
T ss_pred HHHHhcCCeEEEEe-EEEEEEEcCCeE-EEEECC--------------CCEEEcCEEEECCCCCC
Confidence 77765558888765 899998876653 344432 24788999999999753
No 38
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.43 E-value=4.8e-13 Score=136.58 Aligned_cols=135 Identities=17% Similarity=0.141 Sum_probs=96.4
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCC-------cceee--------c------------------
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGA-------SGSVV--------R------------------ 151 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~-------~~~~~--------~------------------ 151 (352)
.++||||||||.+|++||+.|++. |++|+||||....+|. ..... .
T Consensus 4 ~~~DVvVIGgG~AGL~AAl~aae~-G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~g~~ds~~~~~~dt~~~g~~~~d 82 (660)
T 2bs2_A 4 QYCDSLVIGGGLAGLRAAVATQQK-GLSTIVLSLIPVKRSHSAAAQGGMQASLGNSKMSDGDNEDLHFMDTVKGSDWGCD 82 (660)
T ss_dssp EECSEEEECCSHHHHHHHHHHHTT-TCCEEEECSSCGGGSGGGGCCSCEECCCCCSGGGTTCCHHHHHHHHHHHTTTCSC
T ss_pred ccccEEEECchHHHHHHHHHHHHC-CCcEEEEeccCCCCCcccccCCCeEeccCCcccCCCCCHHHHHHHHHHhcCCCCC
Confidence 368999999999999999999999 9999999998654221 00000 0
Q ss_pred -----------chHHHHHHHcCCccccCCC-----------------------eE----------EEe-----chHHHHH
Q 039605 152 -----------KPAHLFLDELGIDYDEQDN-----------------------YV----------VIK-----HAALFTS 182 (352)
Q Consensus 152 -----------~~~~~~l~~~Gi~~~~~~~-----------------------~~----------~~~-----~~~~~~~ 182 (352)
...++||.++|++|..... +. ... ....+..
T Consensus 83 ~~~v~~~~~~s~~~i~~L~~~Gv~f~~~~~G~~~~~~~g~~~~~l~~~e~~~~~~~~~~gg~~~~R~~~~~d~tG~~l~~ 162 (660)
T 2bs2_A 83 QKVARMFVNTAPKAIRELAAWGVPWTRIHKGDRMAIINAQKTTITEEDFRHGLIHSRDFGGTKKWRTCYTADATGHTMLF 162 (660)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCBCCSEEEECCCSSCCCEEEECGGGTTSBCCBCCTTCSSCCEECSTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCceecCCCcccccccccccccccchhhhhhhccccccccccceeEeeCCCCHHHHHH
Confidence 0124678888988864311 10 000 1335667
Q ss_pred HHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 183 TIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 183 ~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
.|.+.+. +.|+++++++.|++|+.++++|.|+.+.+ ..+ |+...|.|+.||+|||+++
T Consensus 163 ~L~~~a~-~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~------~~~---G~~~~i~A~~VVlATGG~~ 220 (660)
T 2bs2_A 163 AVANECL-KLGVSIQDRKEAIALIHQDGKCYGAVVRD------LVT---GDIIAYVAKGTLIATGGYG 220 (660)
T ss_dssp HHHHHHH-HHTCEEECSEEEEEEEEETTEEEEEEEEE------TTT---CCEEEEECSEEEECCCCCG
T ss_pred HHHHHHH-hCCCEEEECcEEEEEEecCCEEEEEEEEE------CCC---CcEEEEEcCEEEEccCcch
Confidence 7777776 45999999999999999889999987632 111 2345799999999999875
No 39
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.43 E-value=2e-12 Score=128.77 Aligned_cols=122 Identities=14% Similarity=0.143 Sum_probs=75.8
Q ss_pred HHHHHHHHHHcCCCcEEEccceeEEEEEeC----CEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCC
Q 039605 180 FTSTIMSKLLARPNVKLFNAVAAEDLIVKG----NRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGAT 255 (352)
Q Consensus 180 ~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~----g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~ 255 (352)
+.+.+.+.+. +.|++++.++.+.++...+ +.+ .+.... .+++ +..++.+|.||+|+|..+.....
T Consensus 252 ~~~~~~~~l~-~~GV~v~~~~~v~~v~~~~~~~~~~~-~v~~~~------~~g~---~~~~~~~D~vi~a~G~~p~~~~l 320 (519)
T 3qfa_A 252 MANKIGEHME-EHGIKFIRQFVPIKVEQIEAGTPGRL-RVVAQS------TNSE---EIIEGEYNTVMLAIGRDACTRKI 320 (519)
T ss_dssp HHHHHHHHHH-HTTCEEEESEEEEEEEEEECCTTCEE-EEEEEE------SSSS---CEEEEEESEEEECSCEEESCSSS
T ss_pred HHHHHHHHHH-HCCCEEEeCCeEEEEEEccCCCCceE-EEEEEE------CCCc---EEEEEECCEEEEecCCcccCCCC
Confidence 3344444444 6799999998888886532 333 232211 0111 22468899999999975443221
Q ss_pred CCCCccccccc--cccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHH
Q 039605 256 GVRGMKALDMN--TAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 319 (352)
Q Consensus 256 g~~g~~~~~~~--~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~ 319 (352)
++ ...++..+ .+.+.+.+++++..|++|++||+... .++ .+..+..+|+.||+.|+.
T Consensus 321 ~l-~~~gl~~~~~~G~I~Vd~~~~Ts~~~IyA~GD~~~g---~~~---~~~~A~~~g~~aa~~i~g 379 (519)
T 3qfa_A 321 GL-ETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILED---KVE---LTPVAIQAGRLLAQRLYA 379 (519)
T ss_dssp CS-TTTTCCCCTTTCCBCCCTTSBCSSTTEEECGGGBSS---SCC---CHHHHHHHHHHHHHHHHS
T ss_pred Ch-hhcCcEEcCCCCeEeeCCCCccCCCCEEEEEeccCC---CCc---cHHHHHHHHHHHHHHHcC
Confidence 11 12234443 46667778889999999999999731 122 234457889999999874
No 40
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.43 E-value=4.6e-13 Score=133.98 Aligned_cols=135 Identities=27% Similarity=0.394 Sum_probs=88.6
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcc-------eee--------------------c------
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASG-------SVV--------------------R------ 151 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~-------~~~--------------------~------ 151 (352)
.++||||||+|++|+++|+.|++ |++|+||||....+|... ... .
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~--G~~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~ds~~~~~~d~l~~g~g~~d~~~v~ 84 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD--QHQVIVLSKGPVTEGSTFYAQGGIAAVFDETDSIDSHVEDTLIAGAGICDRHAVE 84 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT--TSCEEEECSSCTTC-------------CCSHHHHHHHHHHHHHHTTTCCCHHHHH
T ss_pred CCCCEEEECccHHHHHHHHHHhc--CCcEEEEECCCCCCCChhhcCCCEEEecCCCCCHHHHHHHHHHhhcccCCHHHHH
Confidence 46899999999999999999997 899999999877654310 000 0
Q ss_pred ------chHHHHHHHcCCccccCC------CeEE----------Ee-----chHHHHHHHHHHHHcCCCcEEEccceeEE
Q 039605 152 ------KPAHLFLDELGIDYDEQD------NYVV----------IK-----HAALFTSTIMSKLLARPNVKLFNAVAAED 204 (352)
Q Consensus 152 ------~~~~~~l~~~Gi~~~~~~------~~~~----------~~-----~~~~~~~~L~~~~~~~~gv~i~~~t~v~~ 204 (352)
....+|+.++|++|+... .+.. .. ....+...|.+++.+..|+++++++.+++
T Consensus 85 ~~~~~~~~~i~~l~~~Gv~f~~~~~~~~~g~~~~~~~gg~~~~r~~~~~d~~g~~l~~~L~~~~~~~~gv~i~~~~~v~~ 164 (540)
T 1chu_A 85 FVASNARSCVQWLIDQGVLFDTHIQPNGEESYHLTREGGHSHRRILHAADATGREVETTLVSKALNHPNIRVLERTNAVD 164 (540)
T ss_dssp HHHHHHHHHHHHHHHTTCC--------------------------------------CCCHHHHHHCTTEEEECSEEEEE
T ss_pred HHHHhHHHHHHHHHHcCCCcccCcccCcCCccccccccccccCeEEEeCCCCHHHHHHHHHHHHHcCCCCEEEeCcEEEE
Confidence 113467888899886432 1110 00 11234455666776557999999999999
Q ss_pred EEE-eCC------EEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 205 LIV-KGN------RVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 205 l~~-~~g------~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
|+. +++ ++.|+.+.+ ..+ |+..+|.|+.||+|||+++
T Consensus 165 L~~~~~g~~~~~~~v~Gv~~~~------~~~---G~~~~i~A~~VVlAtGg~~ 208 (540)
T 1chu_A 165 LIVSDKIGLPGTRRVVGAWVWN------RNK---ETVETCHAKAVVLATGGAS 208 (540)
T ss_dssp EEEGGGTTCCSSCBEEEEEEEE------TTT---TEEEEEECSEEEECCCCCG
T ss_pred EEEcCCCCcccCCEEEEEEEEE------cCC---CcEEEEEcCeEEECCCCcc
Confidence 998 546 898988742 011 2345899999999999876
No 41
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.43 E-value=1.2e-12 Score=127.97 Aligned_cols=132 Identities=22% Similarity=0.336 Sum_probs=94.7
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCC-C--cceeecchHHHHHHHcCCcccc---------------
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGG-A--SGSVVRKPAHLFLDELGIDYDE--------------- 167 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG-~--~~~~~~~~~~~~l~~~Gi~~~~--------------- 167 (352)
++||+|||||++|+++|+.|++. |++|+|||+.+.+.. . +...+ ..+.++++|+....
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~-G~~V~vlE~~~~~~~g~~~~g~~l---~~~~l~~lg~~~~~~~~~~~~~~~~~~~~ 81 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRR-GLKILLVDSKPWNRIGDKPCGDAV---SKAHFDKLGMPYPKGEELENKINGIKLYS 81 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSS-SCCEEEECSSCGGGTTCSCCCCEE---EHHHHHHTTCCCCCGGGEEEEEEEEEEEC
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCCCCCCCcccccccc---cHHHHHHhcCCCCchHHHHhhhcceEEEC
Confidence 58999999999999999999999 999999999875421 1 11112 34566666653210
Q ss_pred -CC--C-----eEEEechHHHHHHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEe
Q 039605 168 -QD--N-----YVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEA 239 (352)
Q Consensus 168 -~~--~-----~~~~~~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A 239 (352)
.. . .....+...+.+.|.+.+.+ .|++++++++|+++..++++++++.+... . +|+..+++|
T Consensus 82 ~~~~~~~~~~~~~~~i~r~~l~~~L~~~a~~-~gv~i~~~~~v~~i~~~~~~v~gv~~~~~------~---~G~~~~~~a 151 (453)
T 3atr_A 82 PDMQTVWTVNGEGFELNAPLYNQRVLKEAQD-RGVEIWDLTTAMKPIFEDGYVKGAVLFNR------R---TNEELTVYS 151 (453)
T ss_dssp TTSSCEEEEEEEEEEECHHHHHHHHHHHHHH-TTCEEESSEEEEEEEEETTEEEEEEEEET------T---TTEEEEEEC
T ss_pred CCCceEEeECCCcEEEcHHHHHHHHHHHHHH-cCCEEEeCcEEEEEEEECCEEEEEEEEEc------C---CCceEEEEc
Confidence 00 0 11234556777888888774 79999999999999999888888776420 0 123358999
Q ss_pred CEEEEccCCCCC
Q 039605 240 KVVVSSCGHDGP 251 (352)
Q Consensus 240 ~~VIlAtG~~~~ 251 (352)
|.||+|+|.++.
T Consensus 152 d~VV~AdG~~s~ 163 (453)
T 3atr_A 152 KVVVEATGYSRS 163 (453)
T ss_dssp SEEEECCGGGCT
T ss_pred CEEEECcCCchh
Confidence 999999998764
No 42
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.42 E-value=3.4e-12 Score=126.55 Aligned_cols=134 Identities=19% Similarity=0.179 Sum_probs=97.7
Q ss_pred CCCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCC-CcceeecchHHHHHHHcCCccccC--------------
Q 039605 104 HADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGG-ASGSVVRKPAHLFLDELGIDYDEQ-------------- 168 (352)
Q Consensus 104 ~~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG-~~~~~~~~~~~~~l~~~Gi~~~~~-------------- 168 (352)
+.++||+||||||+|+++|+.|+++ |++|+||||.+.++. .....+.....+.++++|+.-...
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~-G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~ 87 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLA-GVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLP 87 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHT-TCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEE
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhcccccccccccee
Confidence 4578999999999999999999999 999999999876543 244556666777787777631100
Q ss_pred ---------CCeEEEechHHHHHHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEe
Q 039605 169 ---------DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEA 239 (352)
Q Consensus 169 ---------~~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A 239 (352)
..+....+...+.+.|.+.+.+ .|++++++++++++..+++.++ +.+.++ + | ..+++|
T Consensus 88 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~-~gv~v~~~~~v~~i~~~~~~v~-v~~~~~-------~---g-~~~~~a 154 (500)
T 2qa1_A 88 IDFGVLEGAWQAAKTVPQSVTETHLEQWATG-LGADIRRGHEVLSLTDDGAGVT-VEVRGP-------E---G-KHTLRA 154 (500)
T ss_dssp EEGGGSTTGGGCEEEEEHHHHHHHHHHHHHH-TTCEEEETCEEEEEEEETTEEE-EEEEET-------T---E-EEEEEE
T ss_pred cccccCCCCCCceeecCHHHHHHHHHHHHHH-CCCEEECCcEEEEEEEcCCeEE-EEEEcC-------C---C-CEEEEe
Confidence 0112333455677777777764 5899999999999999888765 544331 1 1 257999
Q ss_pred CEEEEccCCCCC
Q 039605 240 KVVVSSCGHDGP 251 (352)
Q Consensus 240 ~~VIlAtG~~~~ 251 (352)
++||.|+|.++.
T Consensus 155 ~~vVgADG~~S~ 166 (500)
T 2qa1_A 155 AYLVGCDGGRSS 166 (500)
T ss_dssp SEEEECCCTTCH
T ss_pred CEEEECCCcchH
Confidence 999999999873
No 43
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.41 E-value=4.3e-12 Score=125.80 Aligned_cols=134 Identities=24% Similarity=0.250 Sum_probs=98.8
Q ss_pred CCCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCC-CcceeecchHHHHHHHcCCccccC--------------
Q 039605 104 HADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGG-ASGSVVRKPAHLFLDELGIDYDEQ-------------- 168 (352)
Q Consensus 104 ~~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG-~~~~~~~~~~~~~l~~~Gi~~~~~-------------- 168 (352)
+.++||+||||||+|+++|+.|+++ |++|+||||.+..+. .....+.....+.++++|+.-...
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~-G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~ 88 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLG-GVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRP 88 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceeccee
Confidence 3578999999999999999999999 999999999876543 244556666778888877631100
Q ss_pred ---------CCeEEEechHHHHHHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEe
Q 039605 169 ---------DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEA 239 (352)
Q Consensus 169 ---------~~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A 239 (352)
..+....+...+.+.|.+.+.+ .|++++++++++++..+++.++ +.+.++ + | .++++|
T Consensus 89 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~-~gv~v~~~~~v~~i~~~~~~v~-v~~~~~-------~---g-~~~~~a 155 (499)
T 2qa2_A 89 VDFGVLEGAHYGVKAVPQSTTESVLEEWALG-RGAELLRGHTVRALTDEGDHVV-VEVEGP-------D---G-PRSLTT 155 (499)
T ss_dssp EEGGGSTTCCCEEEEEEHHHHHHHHHHHHHH-TTCEEEESCEEEEEEECSSCEE-EEEECS-------S---C-EEEEEE
T ss_pred cccccCCCCCCceEecCHHHHHHHHHHHHHh-CCCEEEcCCEEEEEEEeCCEEE-EEEEcC-------C---C-cEEEEe
Confidence 0122334556677777777764 5899999999999998877664 544331 1 1 257999
Q ss_pred CEEEEccCCCCC
Q 039605 240 KVVVSSCGHDGP 251 (352)
Q Consensus 240 ~~VIlAtG~~~~ 251 (352)
|+||.|+|.++.
T Consensus 156 ~~vVgADG~~S~ 167 (499)
T 2qa2_A 156 RYVVGCDGGRST 167 (499)
T ss_dssp EEEEECCCTTCH
T ss_pred CEEEEccCcccH
Confidence 999999999873
No 44
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.40 E-value=3.5e-12 Score=123.89 Aligned_cols=132 Identities=20% Similarity=0.237 Sum_probs=91.0
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCC-cEEEEeccCCCCCCcc-----eeec---------------c-----------
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNV-QVAIIEQSVSPGGASG-----SVVR---------------K----------- 152 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~-kV~viEk~~~~GG~~~-----~~~~---------------~----------- 152 (352)
.++||||||||++|+++|++|+++ |+ +|+||||....++... .... .
T Consensus 5 ~~~dVvIIGgG~aGlsaA~~La~~-G~~~V~vlE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 83 (438)
T 3dje_A 5 KSSSLLIVGAGTWGTSTALHLARR-GYTNVTVLDPYPVPSAISAGNDVNKVISSGQYSNNKDEIEVNEILAEEAFNGWKN 83 (438)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHT-TCCCEEEEESSCSSCTTCTTCSSCEEECCCCSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHHc-CCCcEEEEeCCCCCCCCccCCCCccEEEeccCCchhhhcchhHHHHHHHHHHHhh
Confidence 468999999999999999999999 99 9999999877654311 0000 0
Q ss_pred --------------------hHHHHHHH-----cCCcc-cc----------C---------C--CeE-----EEechHHH
Q 039605 153 --------------------PAHLFLDE-----LGIDY-DE----------Q---------D--NYV-----VIKHAALF 180 (352)
Q Consensus 153 --------------------~~~~~l~~-----~Gi~~-~~----------~---------~--~~~-----~~~~~~~~ 180 (352)
...+++.. +++.+ .. . . .+. ...+...+
T Consensus 84 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~l~~~~~~g~~g~~~~~~~g~~~~~~~ 163 (438)
T 3dje_A 84 DPLFKPYYHDTGLLMSACSQEGLDRLGVRVRPGEDPNLVELTRPEQFRKLAPEGVLQGDFPGWKGYFARSGAGWAHARNA 163 (438)
T ss_dssp CTTTGGGEECCCEEEEECSHHHHHHHHHHHCGGGCTTCEEECSHHHHHTTSCTTTSCSCCTTCEEEEESSSCEEECHHHH
T ss_pred CccccCcEeccceEEEecCcchHHHHHHHHhhcccCCceecCCHHHHHHhCCcccccCCCCCceEEEeCCCCEEecHHHH
Confidence 00111111 12222 00 0 0 111 12234567
Q ss_pred HHHHHHHHHcCCCcEEEccc---eeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCC
Q 039605 181 TSTIMSKLLARPNVKLFNAV---AAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPF 252 (352)
Q Consensus 181 ~~~L~~~~~~~~gv~i~~~t---~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~ 252 (352)
...|.+.+. +.|++|++++ +|++|..+++++.||.+.++ .+++||.||+|+|.++..
T Consensus 164 ~~~L~~~a~-~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G--------------~~i~Ad~VV~AtG~~s~~ 223 (438)
T 3dje_A 164 LVAAAREAQ-RMGVKFVTGTPQGRVVTLIFENNDVKGAVTADG--------------KIWRAERTFLCAGASAGQ 223 (438)
T ss_dssp HHHHHHHHH-HTTCEEEESTTTTCEEEEEEETTEEEEEEETTT--------------EEEECSEEEECCGGGGGG
T ss_pred HHHHHHHHH-hcCCEEEeCCcCceEEEEEecCCeEEEEEECCC--------------CEEECCEEEECCCCChhh
Confidence 777777776 5699999999 99999999999998988542 589999999999998743
No 45
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.39 E-value=1e-12 Score=131.32 Aligned_cols=130 Identities=15% Similarity=0.229 Sum_probs=93.2
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCC--------------------------CCCcce----e---ec
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSP--------------------------GGASGS----V---VR 151 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~--------------------------GG~~~~----~---~~ 151 (352)
.++||+|||||++|+++|+.|++. |++|+|||++..+ ||.... . +.
T Consensus 106 ~~~DVVIVGgGpaGL~aA~~La~~-G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~ 184 (549)
T 3nlc_A 106 LTERPIVIGFGPCGLFAGLVLAQM-GFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVK 184 (549)
T ss_dssp CCCCCEEECCSHHHHHHHHHHHHT-TCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEec
Confidence 358999999999999999999999 9999999998543 111000 0 00
Q ss_pred ------chHHHHHHHcCCccccCCC-e--EEEechHHHHHHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccce
Q 039605 152 ------KPAHLFLDELGIDYDEQDN-Y--VVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALV 222 (352)
Q Consensus 152 ------~~~~~~l~~~Gi~~~~~~~-~--~~~~~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~ 222 (352)
....+++..+|.+...... . ........+...|.+.+. +.|++++++++|+++..++++++++.+.++
T Consensus 185 ~~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~-~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G-- 261 (549)
T 3nlc_A 185 DPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATII-ELGGEIRFSTRVDDLHMEDGQITGVTLSNG-- 261 (549)
T ss_dssp CTTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHH-HTTCEEESSCCEEEEEESSSBEEEEEETTS--
T ss_pred cccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHH-hcCCEEEeCCEEEEEEEeCCEEEEEEECCC--
Confidence 1234566777776443211 0 001123456667777776 469999999999999998888888888542
Q ss_pred eccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 223 SMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 223 ~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
.++.|+.||+|+|.++
T Consensus 262 ------------~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 262 ------------EEIKSRHVVLAVGHSA 277 (549)
T ss_dssp ------------CEEECSCEEECCCTTC
T ss_pred ------------CEEECCEEEECCCCCh
Confidence 5799999999999987
No 46
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.39 E-value=3.8e-12 Score=121.35 Aligned_cols=126 Identities=20% Similarity=0.180 Sum_probs=91.9
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCC-CcceeecchHHHHHHHcCCcccc--------------C--
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGG-ASGSVVRKPAHLFLDELGIDYDE--------------Q-- 168 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG-~~~~~~~~~~~~~l~~~Gi~~~~--------------~-- 168 (352)
.+||+|||||++|+++|+.|++. |++|+|||+...++. +....+.....+.++++|+.-.. .
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~-G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~ 89 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQN-GWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNK 89 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTE
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCc
Confidence 58999999999999999999999 999999999877653 34444555566677776652110 0
Q ss_pred --------CCeEEEechHHHHHHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeC
Q 039605 169 --------DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAK 240 (352)
Q Consensus 169 --------~~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~ 240 (352)
+......+...+.+.|.+.+.+ .|++++++++++++.. ++ .+.+.+ ..++++|
T Consensus 90 ~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~-~gv~i~~~~~v~~i~~-~~---~v~~~~--------------g~~~~ad 150 (379)
T 3alj_A 90 SVSKETFNGLPWRIMTRSHLHDALVNRARA-LGVDISVNSEAVAADP-VG---RLTLQT--------------GEVLEAD 150 (379)
T ss_dssp EEEEECGGGCCEEEEEHHHHHHHHHHHHHH-TTCEEESSCCEEEEET-TT---EEEETT--------------SCEEECS
T ss_pred eeeeccCCCCceEEECHHHHHHHHHHHHHh-cCCEEEeCCEEEEEEe-CC---EEEECC--------------CCEEEcC
Confidence 0012234456777888888774 5999999999999976 44 344432 1479999
Q ss_pred EEEEccCCCCC
Q 039605 241 VVVSSCGHDGP 251 (352)
Q Consensus 241 ~VIlAtG~~~~ 251 (352)
.||+|+|.++.
T Consensus 151 ~vV~AdG~~s~ 161 (379)
T 3alj_A 151 LIVGADGVGSK 161 (379)
T ss_dssp EEEECCCTTCH
T ss_pred EEEECCCccHH
Confidence 99999998873
No 47
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.39 E-value=4.9e-12 Score=121.69 Aligned_cols=129 Identities=12% Similarity=0.106 Sum_probs=90.7
Q ss_pred CCCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCC-cceeecchHHHHHHHcCCcc---------c------c
Q 039605 104 HADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGA-SGSVVRKPAHLFLDELGIDY---------D------E 167 (352)
Q Consensus 104 ~~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~-~~~~~~~~~~~~l~~~Gi~~---------~------~ 167 (352)
..++||+|||||++|+++|+.|+++ |++|+||||.+.++.. ....+.....+.++++|+.- . .
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~-G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~ 99 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQS-GIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDF 99 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEET
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEEC
Confidence 3478999999999999999999999 9999999998765422 33444555566666666521 0 0
Q ss_pred C-CC----------------eEEEechHHHHHHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCC
Q 039605 168 Q-DN----------------YVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQS 230 (352)
Q Consensus 168 ~-~~----------------~~~~~~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~ 230 (352)
. +. .....+...+.+.|.+.+.+ ++++++++|+++..+++.+. +.+.+
T Consensus 100 ~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~---~~i~~~~~v~~i~~~~~~v~-v~~~~----------- 164 (407)
T 3rp8_A 100 RSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR---DSVQFGKRVTRCEEDADGVT-VWFTD----------- 164 (407)
T ss_dssp TTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG---GGEEESCCEEEEEEETTEEE-EEETT-----------
T ss_pred CCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc---CEEEECCEEEEEEecCCcEE-EEEcC-----------
Confidence 0 11 11123445666777777653 88999999999999888654 44433
Q ss_pred CCCCeEEEeCEEEEccCCCCC
Q 039605 231 CMDPNVMEAKVVVSSCGHDGP 251 (352)
Q Consensus 231 ~g~~~~i~A~~VIlAtG~~~~ 251 (352)
..++.||.||.|+|.++.
T Consensus 165 ---g~~~~a~~vV~AdG~~S~ 182 (407)
T 3rp8_A 165 ---GSSASGDLLIAADGSHSA 182 (407)
T ss_dssp ---SCEEEESEEEECCCTTCS
T ss_pred ---CCEEeeCEEEECCCcChH
Confidence 248999999999999874
No 48
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.39 E-value=7e-13 Score=135.38 Aligned_cols=137 Identities=13% Similarity=0.286 Sum_probs=96.7
Q ss_pred CCccEEEECCcHHHHHHHHHHhcC-----CCCcEEEEeccCCCCCC--------cceeec--------------------
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKN-----PNVQVAIIEQSVSPGGA--------SGSVVR-------------------- 151 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~-----~G~kV~viEk~~~~GG~--------~~~~~~-------------------- 151 (352)
.++||||||+|++||+||+.|++. +|++|+||||....+++ .+..+.
T Consensus 21 ~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~~s~s~AqG~~gi~a~l~~ds~e~~~~~~~~~~~gl~d 100 (662)
T 3gyx_A 21 HSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLERSGAVAQGLSAINTYLGDNNADDYVRMVRTDLMGLVR 100 (662)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTTTCSTTTTCEEEECCCCTTSCHHHHHHHHHHHTTTCCC
T ss_pred EEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCCCCcccccCcchheeecCCCCHHHHHHHHHHhcCCCcc
Confidence 468999999999999999999985 48999999997653322 101100
Q ss_pred -----------chHHHHHHHcCCccccC---CCeE-------------------------EEechHHHHHHHHHHHHcC-
Q 039605 152 -----------KPAHLFLDELGIDYDEQ---DNYV-------------------------VIKHAALFTSTIMSKLLAR- 191 (352)
Q Consensus 152 -----------~~~~~~l~~~Gi~~~~~---~~~~-------------------------~~~~~~~~~~~L~~~~~~~- 191 (352)
...++||.++|++|+.. +.+. .......+...|.+.+.+.
T Consensus 101 ~~~v~~l~~~a~~~i~~L~~~Gv~f~~~~~~G~~~~g~~~~~fg~~~~~gg~~~~r~~~~~~~~G~~i~~~L~~~a~~~~ 180 (662)
T 3gyx_A 101 EDLIYDLGRHVDDSVHLFEEWGLPVWIKDEHGHNLDGAQAKAAGKSLRNGDKPVRSGRWQIMINGESYKVIVAEAAKNAL 180 (662)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCBCEECSSSCEECHHHHHHHTCCTTTTCCBCCSSTTCEEEEETSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCceecCCCCccccchhhhccccccccCccccccceecccCCHHHHHHHHHHHHHhcC
Confidence 01346888999998653 1111 1112335566677776643
Q ss_pred CCcEEEccceeEEEEEeCC---EEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 192 PNVKLFNAVAAEDLIVKGN---RVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 192 ~gv~i~~~t~v~~l~~~~g---~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
.|++++.++.+++|+.+++ +|.|+...+ ..+ ++...|.|+.||+|||+++
T Consensus 181 ~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~------~~~---g~~~~i~Ak~VVLATGG~g 233 (662)
T 3gyx_A 181 GQDRIIERIFIVKLLLDKNTPNRIAGAVGFN------LRA---NEVHIFKANAMVVACGGAV 233 (662)
T ss_dssp CTTTEECSEEECCCEECSSSTTBEEEEEEEE------SSS---SCEEEEECSEEEECCCCBC
T ss_pred CCcEEEEceEEEEEEEeCCccceEEEEEEEE------cCC---CcEEEEEeCEEEECCCccc
Confidence 3999999999999999877 999997632 111 2456899999999999876
No 49
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.39 E-value=4.4e-12 Score=126.63 Aligned_cols=132 Identities=16% Similarity=0.140 Sum_probs=92.8
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCC-cceeecchHHHHHHHcCCc---------cccC------
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGA-SGSVVRKPAHLFLDELGID---------YDEQ------ 168 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~-~~~~~~~~~~~~l~~~Gi~---------~~~~------ 168 (352)
.++||+|||||++|+++|+.|+++ |++|+||||.+..+.. ....+.....+.++++|+. ....
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~-G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~ 82 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQ-GVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIR 82 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTT-TCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEE
T ss_pred ccCcEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeee
Confidence 468999999999999999999999 9999999998765422 3344455556666665542 1100
Q ss_pred ------C-Ce---------------------EEEechHHHHHHHHHHHHcCCCcEEEccceeEEEEEeCC----EEEEEE
Q 039605 169 ------D-NY---------------------VVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGN----RVGGIV 216 (352)
Q Consensus 169 ------~-~~---------------------~~~~~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g----~v~gv~ 216 (352)
+ .+ ....+...+...|.+.+.+ .|++++++++++++..+++ .+. +.
T Consensus 83 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~-~gv~i~~~~~v~~i~~~~~~~~~~v~-v~ 160 (535)
T 3ihg_A 83 LAESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARK-HGGAIRFGTRLLSFRQHDDDAGAGVT-AR 160 (535)
T ss_dssp EESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHH-TTCEEESSCEEEEEEEECGGGCSEEE-EE
T ss_pred EEeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHh-CCCEEEeCCEEEEEEECCCCccccEE-EE
Confidence 0 00 0112334566777777775 4999999999999999876 654 33
Q ss_pred EcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 217 TNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 217 ~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
+.++ + ...+++||+||.|+|.++
T Consensus 161 ~~~~-------~----~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 161 LAGP-------D----GEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp EEET-------T----EEEEEEEEEEEECCCTTC
T ss_pred EEcC-------C----CeEEEEeCEEEECCCCcc
Confidence 3221 0 136899999999999987
No 50
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.38 E-value=1.5e-12 Score=132.88 Aligned_cols=137 Identities=20% Similarity=0.330 Sum_probs=93.6
Q ss_pred CCccEEEECCcHHHHHHHHHHh---c-CCCCcEEEEeccCCCCCC------ccee--e---------cc-----------
Q 039605 105 ADTDVVVVGAGSAGLSCAYEIS---K-NPNVQVAIIEQSVSPGGA------SGSV--V---------RK----------- 152 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la---~-~~G~kV~viEk~~~~GG~------~~~~--~---------~~----------- 152 (352)
.++||||||||++||+||+.|+ + . |++|+||||....+++ .... + ..
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~-G~~V~vlEK~~~~~s~~~a~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~~~ 99 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLG-GLKVTLVEKAAVERSGAVAQGLSAINTYIDLTGRSERQNTLEDYVRYVTLD 99 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTT-TCCEEEECSSCTTTCSTTTTCEEEESCCCCSSSSBSCCCCHHHHHHHHHHH
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhC-CCeEEEEeCcCCCCCcceecccccccchhhHHHhcCCCCCHHHHHHHHHHH
Confidence 3689999999999999999999 6 8 9999999998643211 0000 1 00
Q ss_pred ------------------hHHHHHHHcCCccccCC--CeE------EEechHHHHHHHHHHHHcCCCc-EEEccceeEEE
Q 039605 153 ------------------PAHLFLDELGIDYDEQD--NYV------VIKHAALFTSTIMSKLLARPNV-KLFNAVAAEDL 205 (352)
Q Consensus 153 ------------------~~~~~l~~~Gi~~~~~~--~~~------~~~~~~~~~~~L~~~~~~~~gv-~i~~~t~v~~l 205 (352)
..++|+.++|++|.... .+. .......+.+.|.+.+.+.+|+ ++++++.+++|
T Consensus 100 g~~l~d~~~v~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~~~~~~g~~~~~~l~~~~~~~~gv~~i~~~~~v~~L 179 (643)
T 1jnr_A 100 MMGLAREDLVADYARHVDGTVHLFEKWGLPIWKTPDGKYVREGQWQIMIHGESYKPIIAEAAKMAVGEENIYERVFIFEL 179 (643)
T ss_dssp TTTCCCHHHHHHHHHHHHHHHHHHHHTTCCBCBCTTSCBCBSSSSCEEEEETTHHHHHHHHHHHHHCGGGEECSEEEEEE
T ss_pred hcCcCcHHHHHHHHHHHHHHHHHHHHcCCcceeCCCCCccCCCccccCCCcHHHHHHHHHHHHhcCCCcEEEecCEEEEE
Confidence 12467788899885431 111 1112234455555555532389 99999999999
Q ss_pred EEeCC---EEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCC
Q 039605 206 IVKGN---RVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGP 251 (352)
Q Consensus 206 ~~~~g---~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~ 251 (352)
+.+++ +|.|+.+.+ ..+ ++...|.|+.||+|||+++.
T Consensus 180 ~~~~~~~g~v~Gv~~~~------~~~---g~~~~i~A~~VVlAtGG~~~ 219 (643)
T 1jnr_A 180 LKDNNDPNAVAGAVGFS------VRE---PKFYVFKAKAVILATGGATL 219 (643)
T ss_dssp EECTTCTTBEEEEEEEE------SSS---SCEEEEECSEEEECCCCBCS
T ss_pred EEcCCccceeEEEEEEE------ecC---CcEEEEEcCEEEECCCcccc
Confidence 99877 999987632 111 13457999999999998763
No 51
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.38 E-value=6.5e-12 Score=115.81 Aligned_cols=164 Identities=15% Similarity=0.149 Sum_probs=117.9
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
-.++|||+|..|+.+|..|++. |.+|+++++.+.... ... +.+
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~-g~~v~~~~~~~~~~~--------------------------------~~~----~~~ 190 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANI-CSKIYLIHRRDEFRA--------------------------------APS----TVE 190 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTT-SSEEEEECSSSSCBS--------------------------------CHH----HHH
T ss_pred CEEEEECCCHHHHHHHHHHHhh-CCEEEEEEeCCCCCC--------------------------------CHH----HHH
Confidence 4799999999999999999999 999999998764310 111 233
Q ss_pred HHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCccc-ccc
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKA-LDM 265 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~-~~~ 265 (352)
++.++.|+++++++.+.++..+++++.++.+.. . +|+..++.+|.||+|+|..+...........+ +..
T Consensus 191 ~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~-------~---~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~g~l~~ 260 (315)
T 3r9u_A 191 KVKKNEKIELITSASVDEVYGDKMGVAGVKVKL-------K---DGSIRDLNVPGIFTFVGLNVRNEILKQDDSKFLCNM 260 (315)
T ss_dssp HHHHCTTEEEECSCEEEEEEEETTEEEEEEEEC-------T---TSCEEEECCSCEEECSCEEECCGGGBCTTSCBSSCB
T ss_pred HHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEc-------C---CCCeEEeecCeEEEEEcCCCCchhhhcccccceeee
Confidence 343478999999999999998888888887741 1 12345899999999999754432211101111 333
Q ss_pred c-cccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHHcCC
Q 039605 266 N-TAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQ 323 (352)
Q Consensus 266 ~-~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~l~~ 323 (352)
+ .+...+.++.++..|++|++||+.... ++ ....++.+|..||..|.++|.+
T Consensus 261 ~~~g~i~vd~~~~t~~~~v~a~GD~~~~~---~~---~~~~A~~~g~~aa~~i~~~l~~ 313 (315)
T 3r9u_A 261 EEGGQVSVDLKMQTSVAGLFAAGDLRKDA---PK---QVICAAGDGAVAALSAMAYIES 313 (315)
T ss_dssp CTTSCBCCCTTCBCSSTTEEECGGGBTTC---CC---CHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcEEeCCCcccCCCCEEEeecccCCc---hh---hhhhHHhhHHHHHHHHHHHHHh
Confidence 3 355666677888999999999997421 22 3445688999999999999864
No 52
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.37 E-value=4.4e-12 Score=124.84 Aligned_cols=126 Identities=18% Similarity=0.299 Sum_probs=91.1
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcc-------eeec-----------------------------
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASG-------SVVR----------------------------- 151 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~-------~~~~----------------------------- 151 (352)
||||||+|++|+++|+.|++. |++|+||||. ..+|... ..+.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~-G~~V~viek~-~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~ 78 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRA-GKKVTLISKR-IDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVT 78 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECSS-TTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHC-CCCEEEEeCC-CCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHH
Confidence 899999999999999999999 9999999998 4444310 0100
Q ss_pred ---chHHHHHHHcCCccccC----C--CeEEEe-----chHHHHHHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEE
Q 039605 152 ---KPAHLFLDELGIDYDEQ----D--NYVVIK-----HAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVT 217 (352)
Q Consensus 152 ---~~~~~~l~~~Gi~~~~~----~--~~~~~~-----~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~ 217 (352)
....+|+.++|++|+.. + .+.... ....+...|.+.+ ++.|+++++++.+ +++.+++++.|+.+
T Consensus 79 ~~~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~-~~~gv~i~~~~~v-~l~~~~~~v~Gv~v 156 (472)
T 2e5v_A 79 SEAKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLA-REEGIPIIEDRLV-EIRVKDGKVTGFVT 156 (472)
T ss_dssp HHHHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHH-HHTTCCEECCCEE-EEEEETTEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHH-HhCCCEEEECcEE-EEEEeCCEEEEEEE
Confidence 01246778889988651 1 111111 2345667777777 4679999999999 99998899988876
Q ss_pred cccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 218 NWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 218 ~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
... ..++.+|.||+|||+++
T Consensus 157 ~~~-------------~g~~~a~~VVlAtGg~~ 176 (472)
T 2e5v_A 157 EKR-------------GLVEDVDKLVLATGGYS 176 (472)
T ss_dssp TTT-------------EEECCCSEEEECCCCCG
T ss_pred EeC-------------CCeEEeeeEEECCCCCc
Confidence 321 12467999999999875
No 53
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.36 E-value=3.2e-12 Score=123.14 Aligned_cols=164 Identities=17% Similarity=0.152 Sum_probs=118.8
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
-.++|||+|..|+.+|..|++. |.+|+++|+.+..... ....++.+.+.+
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtvv~~~~~~~~~-----------------------------~~~~~~~~~l~~ 192 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAK-GLEVDVVELAPRVMAR-----------------------------VVTPEISSYFHD 192 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSTTTT-----------------------------TSCHHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCCcchhh-----------------------------ccCHHHHHHHHH
Confidence 4799999999999999999999 9999999998654210 001334444444
Q ss_pred HHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCccccccc
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDMN 266 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~~ 266 (352)
.+. +.|+++++++.+.++..+++++.++.+.+| .++.+|.||+|+|..+.... ....++..+
T Consensus 193 ~l~-~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG--------------~~i~aD~Vv~a~G~~p~~~l---~~~~gl~~~ 254 (404)
T 3fg2_P 193 RHS-GAGIRMHYGVRATEIAAEGDRVTGVVLSDG--------------NTLPCDLVVVGVGVIPNVEI---AAAAGLPTA 254 (404)
T ss_dssp HHH-HTTCEEECSCCEEEEEEETTEEEEEEETTS--------------CEEECSEEEECCCEEECCHH---HHHTTCCBS
T ss_pred HHH-hCCcEEEECCEEEEEEecCCcEEEEEeCCC--------------CEEEcCEEEECcCCccCHHH---HHhCCCCCC
Confidence 444 679999999999999998888888888543 58999999999997544311 111223334
Q ss_pred cccceeecccccccCceeEecchhhhhc---CCCCCCcchhhhhhchHHHHHHHHH
Q 039605 267 TAEDAIVKLTREIVPGMIVAGMEVAEID---GAPRMGPTFGAMMISGQKAAHLALK 319 (352)
Q Consensus 267 ~g~~~vv~~~~~~~pg~~~aG~~~~~~~---g~~r~g~~~~~~~~sG~~aA~~i~~ 319 (352)
.+ +.+.+++++..|++|++||+..... |.......+..+..+|+.||..|+.
T Consensus 255 ~G-i~vd~~~~t~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 309 (404)
T 3fg2_P 255 AG-IIVDQQLLTSDPHISAIGDCALFESVRFGETMRVESVQNATDQARCVAARLTG 309 (404)
T ss_dssp SS-EEECTTSBCSSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHHHHHHTTT
T ss_pred CC-EEECCCcccCCCCEEEeecceeecCccCCceeeehHHHHHHHHHHHHHHHhCC
Confidence 44 5566778889999999999986542 2212223466678899999998874
No 54
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.36 E-value=3e-12 Score=122.49 Aligned_cols=133 Identities=18% Similarity=0.186 Sum_probs=90.1
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCC---CCCcceeecchHHHHHHHcCCcccc--------------C
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSP---GGASGSVVRKPAHLFLDELGIDYDE--------------Q 168 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~---GG~~~~~~~~~~~~~l~~~Gi~~~~--------------~ 168 (352)
++||+|||||++|+++|+.|++. |++|+||||.+.. .......+.....+.++++|+.-.. .
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~-G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~ 80 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKA-GIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFA 80 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHH-TCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEET
T ss_pred CccEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEEC
Confidence 57999999999999999999999 9999999997641 1111123555566777777763110 0
Q ss_pred C-------------CeEEEechHHHHHHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEE-cccceeccCCCCCCCCC
Q 039605 169 D-------------NYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVT-NWALVSMNHDSQSCMDP 234 (352)
Q Consensus 169 ~-------------~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~-~~g~~~~~~~~~~~g~~ 234 (352)
+ ..........+.+.|++.+.+ .|++++++++++++..+++..+.+.+ .+| +.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g------------~~ 147 (394)
T 1k0i_A 81 GQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREA-CGATTVYQAAEVRLHDLQGERPYVTFERDG------------ER 147 (394)
T ss_dssp TEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHH-TTCEEESSCEEEEEECTTSSSCEEEEEETT------------EE
T ss_pred CceEEeccccccCCCceEEechHHHHHHHHHHHHh-cCCeEEeceeEEEEEEecCCceEEEEecCC------------cE
Confidence 0 011112334566777777764 59999999999999876432223444 221 22
Q ss_pred eEEEeCEEEEccCCCCCC
Q 039605 235 NVMEAKVVVSSCGHDGPF 252 (352)
Q Consensus 235 ~~i~A~~VIlAtG~~~~~ 252 (352)
.+++||.||.|+|.++..
T Consensus 148 ~~~~a~~vV~AdG~~S~v 165 (394)
T 1k0i_A 148 LRLDCDYIAGCDGFHGIS 165 (394)
T ss_dssp EEEECSEEEECCCTTCST
T ss_pred EEEEeCEEEECCCCCcHH
Confidence 479999999999998753
No 55
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.36 E-value=1.4e-11 Score=118.33 Aligned_cols=128 Identities=20% Similarity=0.253 Sum_probs=91.1
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCC-CC-CcceeecchHHHHHHHcCCccc-------------c-C
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSP-GG-ASGSVVRKPAHLFLDELGIDYD-------------E-Q 168 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~-GG-~~~~~~~~~~~~~l~~~Gi~~~-------------~-~ 168 (352)
..+||+|||||++|+++|+.|++. |++|+|||+.+.. .. +....+.....+.++++|+... . .
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~-G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 82 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDA-GVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDALT 82 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETTT
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC-CCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecCC
Confidence 367999999999999999999999 9999999998754 22 2334455566788888887421 0 1
Q ss_pred CCeEE-------EechHHHHHHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCE
Q 039605 169 DNYVV-------IKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKV 241 (352)
Q Consensus 169 ~~~~~-------~~~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~ 241 (352)
+.... ..+...+.+.|.+.+ .+++++++++++++..+++++. +.+.+ ..++++|.
T Consensus 83 g~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~v~-v~~~~--------------g~~~~ad~ 144 (397)
T 2vou_A 83 GERVGSVPADWRFTSYDSIYGGLYELF---GPERYHTSKCLVGLSQDSETVQ-MRFSD--------------GTKAEANW 144 (397)
T ss_dssp CCEEEEEECCCCEEEHHHHHHHHHHHH---CSTTEETTCCEEEEEECSSCEE-EEETT--------------SCEEEESE
T ss_pred CCccccccCcccccCHHHHHHHHHHhC---CCcEEEcCCEEEEEEecCCEEE-EEECC--------------CCEEECCE
Confidence 11000 122345556655554 4899999999999998877654 54433 24799999
Q ss_pred EEEccCCCCC
Q 039605 242 VVSSCGHDGP 251 (352)
Q Consensus 242 VIlAtG~~~~ 251 (352)
||.|+|.++.
T Consensus 145 vV~AdG~~S~ 154 (397)
T 2vou_A 145 VIGADGGASV 154 (397)
T ss_dssp EEECCCTTCH
T ss_pred EEECCCcchh
Confidence 9999998874
No 56
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.36 E-value=1.3e-11 Score=114.00 Aligned_cols=162 Identities=19% Similarity=0.133 Sum_probs=116.4
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
-.|+|||+|..|+.+|..|++. |.+|+++++.+.... . ..+.+
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~-g~~Vtlv~~~~~~~~--------------------------------~----~~~~~ 187 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGI-VEHVTLLEFAPEMKA--------------------------------D----QVLQD 187 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-BSEEEEECSSSSCCS--------------------------------C----HHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHh-CCEEEEEEeCcccCc--------------------------------c----HHHHH
Confidence 4799999999999999999999 999999998764310 0 12344
Q ss_pred HHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCcccccc-
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDM- 265 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~- 265 (352)
++.+..|+++++++.+.++..+++++.++.+.+. .+++..++.+|.||+|+|..+.... ... .+..
T Consensus 188 ~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~---------~~g~~~~i~~D~vi~a~G~~p~~~~---l~~-~l~~~ 254 (310)
T 1fl2_A 188 KLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDR---------VSGDIHNIELAGIFVQIGLLPNTNW---LEG-AVERN 254 (310)
T ss_dssp HHHTCTTEEEESSEEEEEEEESSSSEEEEEEEET---------TTCCEEEEECSEEEECSCEEESCGG---GTT-TSCBC
T ss_pred HHhhCCCeEEecCCceEEEEcCCCcEEEEEEEEC---------CCCcEEEEEcCEEEEeeCCccCchH---Hhc-ccccc
Confidence 4444479999999999999887777777776431 1123468999999999996543221 111 1332
Q ss_pred ccccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHHcCCC
Q 039605 266 NTAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQP 324 (352)
Q Consensus 266 ~~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~l~~~ 324 (352)
..+...+.+++++..|++|++||+.... . .....++.+|+.||..|.++|.+.
T Consensus 255 ~~g~i~vd~~~~t~~~~vya~GD~~~~~---~---~~~~~A~~~g~~aa~~i~~~l~~~ 307 (310)
T 1fl2_A 255 RMGEIIIDAKCETNVKGVFAAGDCTTVP---Y---KQIIIATGEGAKASLSAFDYLIRT 307 (310)
T ss_dssp TTSCBCCCTTCBCSSTTEEECSTTBSCS---S---CCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCcEEcCCCCccCCCCEEEeecccCCc---c---hhhhhhHhhHHHHHHHHHHHHHHh
Confidence 2355566677888999999999998532 1 234455789999999999998653
No 57
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.35 E-value=1.1e-11 Score=117.13 Aligned_cols=169 Identities=14% Similarity=0.136 Sum_probs=118.3
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
-.|+|||+|..|+.+|..|++. |.+|+++++.+..... ..+...+.+
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~-g~~V~lv~~~~~~~~~--------------------------------~~~~~~l~~ 210 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKN-AASVTLVHRGHEFQGH--------------------------------GKTAHEVER 210 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTT-SSEEEEECSSSSCSSC--------------------------------SHHHHSSHH
T ss_pred CcEEEECCCHHHHHHHHHHHhc-CCEEEEEEcCCCCCCC--------------------------------HHHHHHHHH
Confidence 4799999999999999999999 9999999987643210 011222333
Q ss_pred HHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCccccccc
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDMN 266 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~~ 266 (352)
... +.|+++++++.+.++..+++++.++.+.. .+|+..++.+|.||+|+|..+.... ....++..+
T Consensus 211 ~~~-~~gv~i~~~~~v~~i~~~~~~v~~v~~~~----------~~g~~~~i~~D~vi~a~G~~p~~~~---l~~~~~~~~ 276 (360)
T 3ab1_A 211 ARA-NGTIDVYLETEVASIEESNGVLTRVHLRS----------SDGSKWTVEADRLLILIGFKSNLGP---LARWDLELY 276 (360)
T ss_dssp HHH-HTSEEEESSEEEEEEEEETTEEEEEEEEE----------TTCCEEEEECSEEEECCCBCCSCGG---GGGSSCCEE
T ss_pred Hhh-cCceEEEcCcCHHHhccCCCceEEEEEEe----------cCCCeEEEeCCEEEECCCCCCCHHH---HHhhccccc
Confidence 333 56899999999999998888877777631 0123468999999999996543321 111223334
Q ss_pred cccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHHcCCCCC
Q 039605 267 TAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNA 326 (352)
Q Consensus 267 ~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~l~~~~~ 326 (352)
.+...+.++.++..|++|++||+.... +.++ .+..++.+|..||..|..+|.+...
T Consensus 277 ~g~i~vd~~~~t~~~~vya~GD~~~~~-~~~~---~~~~A~~~g~~aa~~i~~~l~~~~~ 332 (360)
T 3ab1_A 277 ENALVVDSHMKTSVDGLYAAGDIAYYP-GKLK---IIQTGLSEATMAVRHSLSYIKPGEK 332 (360)
T ss_dssp TTEEECCTTSBCSSTTEEECSTTEECT-TCCC---SHHHHHHHHHHHHHHHHHHHSCC--
T ss_pred cCeeeecCCCcCCCCCEEEecCccCCC-Cccc---eeehhHHHHHHHHHHHHhhcCCccc
Confidence 455566677788899999999998532 2122 3445678999999999999976544
No 58
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.35 E-value=1e-11 Score=115.33 Aligned_cols=162 Identities=17% Similarity=0.160 Sum_probs=115.0
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
-.|+|||+|..|+-.|..|++. |.+|+++++.+.... .. .+.+
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~-g~~V~~i~~~~~~~~--------------------------------~~----~l~~ 198 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEY-VKNVTIIEYMPKYMC--------------------------------EN----AYVQ 198 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTT-BSEEEEECSSSSCCS--------------------------------CH----HHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhh-CCcEEEEEcCCccCC--------------------------------CH----HHHH
Confidence 4799999999999999999999 999999998753310 01 1233
Q ss_pred HHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCccccccc
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDMN 266 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~~ 266 (352)
++. +.|+++++++++.++..+++++.++.+.. .. +|+..++.+|.||+|+|..+.... ....++..+
T Consensus 199 ~l~-~~gv~i~~~~~v~~i~~~~~~v~~v~~~~------~~---~g~~~~i~~D~vi~a~G~~p~~~~---l~~~gl~~~ 265 (319)
T 3cty_A 199 EIK-KRNIPYIMNAQVTEIVGDGKKVTGVKYKD------RT---TGEEKLIETDGVFIYVGLIPQTSF---LKDSGVKLD 265 (319)
T ss_dssp HHH-HTTCCEECSEEEEEEEESSSSEEEEEEEE------TT---TCCEEEECCSEEEECCCEEECCGG---GTTSCCCBC
T ss_pred HHh-cCCcEEEcCCeEEEEecCCceEEEEEEEE------cC---CCceEEEecCEEEEeeCCccChHH---Hhhcccccc
Confidence 333 46999999999999988766677777642 01 123457999999999996544322 111223322
Q ss_pred -cccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHHcCCC
Q 039605 267 -TAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQP 324 (352)
Q Consensus 267 -~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~l~~~ 324 (352)
.+...+.+++++..|++|++||+.... ++ .+..++.+|+.||..|.++|.+.
T Consensus 266 ~~g~i~vd~~~~t~~~~vya~GD~~~~~---~~---~~~~A~~~g~~aa~~i~~~l~~~ 318 (319)
T 3cty_A 266 ERGYIVVDSRQRTSVPGVYAAGDVTSGN---FA---QIASAVGDGCKAALSLYSDSISK 318 (319)
T ss_dssp TTSCBCCCTTCBCSSTTEEECSTTBTTC---CC---CHHHHHHHHHHHHHHHHHHHTC-
T ss_pred CCccEeCCCCCccCCCCEEEeecccCcc---hh---hHHHHHHHHHHHHHHHHHHhhcc
Confidence 355566677788999999999998531 12 24456889999999999999765
No 59
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.34 E-value=1.3e-12 Score=122.46 Aligned_cols=135 Identities=19% Similarity=0.255 Sum_probs=87.2
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecch----HHHHHHHcCCccccCCCeEEEechHHHH
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKP----AHLFLDELGIDYDEQDNYVVIKHAALFT 181 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~----~~~~l~~~Gi~~~~~~~~~~~~~~~~~~ 181 (352)
++||+|||||++|+++|+.|+++ |++|+|||+.+.+||.+...+... ......-.+.++..... ......++.
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~-g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 79 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRS-GLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQG--PYPARAEVL 79 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHS-SCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSS--SSCBHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCcc--CCCCHHHHH
Confidence 57999999999999999999999 999999999988887644321100 00000000111110000 011234555
Q ss_pred HHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCC
Q 039605 182 STIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRG 259 (352)
Q Consensus 182 ~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g 259 (352)
..+.+.+. +.|++++++++|+++..+++.+.++.+.+ .++.+|.||+|+|.++....+.+++
T Consensus 80 ~~l~~~~~-~~~~~~~~~~~v~~i~~~~~~~~~v~~~~---------------g~~~~d~vV~AtG~~~~~~~~~~~g 141 (357)
T 4a9w_A 80 AYLAQYEQ-KYALPVLRPIRVQRVSHFGERLRVVARDG---------------RQWLARAVISATGTWGEAYTPEYQG 141 (357)
T ss_dssp HHHHHHHH-HTTCCEECSCCEEEEEEETTEEEEEETTS---------------CEEEEEEEEECCCSGGGBCCCCCTT
T ss_pred HHHHHHHH-HcCCEEEcCCEEEEEEECCCcEEEEEeCC---------------CEEEeCEEEECCCCCCCCCCCCCCC
Confidence 55555544 56999999999999999887654354422 2899999999999865433333444
No 60
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.34 E-value=1.1e-11 Score=124.67 Aligned_cols=129 Identities=22% Similarity=0.260 Sum_probs=88.2
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC-CCCCC-cceeec----chHHHHHHH-----------cCCccccC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV-SPGGA-SGSVVR----KPAHLFLDE-----------LGIDYDEQ 168 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~-~~GG~-~~~~~~----~~~~~~l~~-----------~Gi~~~~~ 168 (352)
+|||||||||++|+.||+.|++. |++|+|||++. ..|.. +..... ....+.++. .++.+...
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~-G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l 105 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARM-GAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKML 105 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT-TCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeec
Confidence 68999999999999999999999 99999999974 33321 111110 011122222 23333211
Q ss_pred ----CC----eEEEechHHHHHHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeC
Q 039605 169 ----DN----YVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAK 240 (352)
Q Consensus 169 ----~~----~~~~~~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~ 240 (352)
+. .....+...+...+.+.+.+..|++++ +..|+++..+++++.+|.+.+| .++.|+
T Consensus 106 ~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e~g~V~GV~t~dG--------------~~i~Ad 170 (637)
T 2zxi_A 106 NTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIVKNNQVVGVRTNLG--------------VEYKTK 170 (637)
T ss_dssp STTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEESSSBEEEEEETTS--------------CEEECS
T ss_pred ccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEecCCEEEEEEECCC--------------cEEEeC
Confidence 00 111234456777777777655799995 5699999998899989988542 579999
Q ss_pred EEEEccCCCC
Q 039605 241 VVVSSCGHDG 250 (352)
Q Consensus 241 ~VIlAtG~~~ 250 (352)
.||+|||.++
T Consensus 171 aVVLATG~~s 180 (637)
T 2zxi_A 171 AVVVTTGTFL 180 (637)
T ss_dssp EEEECCTTCB
T ss_pred EEEEccCCCc
Confidence 9999999875
No 61
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.34 E-value=2.6e-11 Score=111.97 Aligned_cols=166 Identities=13% Similarity=0.095 Sum_probs=116.7
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHH
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIM 185 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~ 185 (352)
.-.|+|||+|..|+.+|..|++. |.+|+++++.+.+.. .. .+.
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~-g~~Vtlv~~~~~~~~--------------------------------~~----~~~ 185 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANI-CKKVYLIHRRDGFRC--------------------------------AP----ITL 185 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTT-SSEEEEECSSSSCCS--------------------------------CH----HHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhc-CCEEEEEeeCCccCC--------------------------------CH----HHH
Confidence 35799999999999999999999 999999998764310 01 134
Q ss_pred HHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCC-ccccc
Q 039605 186 SKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRG-MKALD 264 (352)
Q Consensus 186 ~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g-~~~~~ 264 (352)
+++.++.|+++++++.+.++..+++++.++.+.. .. +|+..++.+|.||+|+|..+........+ ..++.
T Consensus 186 ~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~------~~---~g~~~~i~~D~vi~a~G~~p~~~~l~~~g~~~~l~ 256 (311)
T 2q0l_A 186 EHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKN------TA---TNEKRELVVPGFFIFVGYDVNNAVLKQEDNSMLCK 256 (311)
T ss_dssp HHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEE------TT---TCCEEEEECSEEEECSCEEECCGGGBCTTSCBSSC
T ss_pred HHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEe------cC---CCceEEEecCEEEEEecCccChhhhhcccccceeE
Confidence 4454457999999999999988767776676642 00 12345899999999999754432211110 00133
Q ss_pred cc-cccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHHcCC
Q 039605 265 MN-TAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQ 323 (352)
Q Consensus 265 ~~-~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~l~~ 323 (352)
.+ .+...+.++.++..|++|++||+.... ++ .+..++.+|+.||..|.++|++
T Consensus 257 ~~~~g~i~vd~~~~t~~~~vya~GD~~~~~---~~---~~~~A~~~g~~aa~~i~~~l~~ 310 (311)
T 2q0l_A 257 CDEYGSIVVDFSMKTNVQGLFAAGDIRIFA---PK---QVVCAASDGATAALSVISYLEH 310 (311)
T ss_dssp BCTTSCBCCCTTCBCSSTTEEECSTTBTTC---CC---CHHHHHHHHHHHHHHHHHHHHC
T ss_pred eccCCCEEeCCccccCCCCeEEcccccCcc---hH---HHHHHHHhHHHHHHHHHHHHhh
Confidence 22 455566677888999999999998631 22 3445678999999999998854
No 62
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.34 E-value=1.2e-11 Score=124.80 Aligned_cols=131 Identities=25% Similarity=0.361 Sum_probs=87.7
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC-CCCC-Ccceeec----chHHHHHHH-----------cCCcccc
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV-SPGG-ASGSVVR----KPAHLFLDE-----------LGIDYDE 167 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~-~~GG-~~~~~~~----~~~~~~l~~-----------~Gi~~~~ 167 (352)
.+|||||||||++|+.||+.|++. |++|+|||++. ..|. ++..... ....+.+.. .++.+..
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~-G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~ 105 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARM-GQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRI 105 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhC-CCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhh
Confidence 368999999999999999999999 99999999974 3332 1111110 011122222 2333321
Q ss_pred C----CC----eEEEechHHHHHHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEe
Q 039605 168 Q----DN----YVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEA 239 (352)
Q Consensus 168 ~----~~----~~~~~~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A 239 (352)
. +. .....+...+...+.+.+.+..|++++ +++|+++..+++++++|.+.+| .++.|
T Consensus 106 l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~e~g~V~GV~t~dG--------------~~I~A 170 (651)
T 3ces_A 106 LNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIVENDRVVGAVTQMG--------------LKFRA 170 (651)
T ss_dssp ESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEESSSBEEEEEETTS--------------EEEEE
T ss_pred hhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEecCCEEEEEEECCC--------------CEEEC
Confidence 1 00 111233456667777777644799995 5699999998888988887542 57999
Q ss_pred CEEEEccCCCCC
Q 039605 240 KVVVSSCGHDGP 251 (352)
Q Consensus 240 ~~VIlAtG~~~~ 251 (352)
|.||+|||.++.
T Consensus 171 d~VVLATGt~s~ 182 (651)
T 3ces_A 171 KAVVLTVGTFLD 182 (651)
T ss_dssp EEEEECCSTTTC
T ss_pred CEEEEcCCCCcc
Confidence 999999998763
No 63
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.34 E-value=4.9e-12 Score=125.28 Aligned_cols=137 Identities=17% Similarity=0.071 Sum_probs=94.6
Q ss_pred CCCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccC----CCeEEEechHH
Q 039605 104 HADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQ----DNYVVIKHAAL 179 (352)
Q Consensus 104 ~~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~----~~~~~~~~~~~ 179 (352)
...+||+|||||++|+++|+.|++. |++|+|||+.+..|+...........+.+..+|+..... ..+. .....+
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~-G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~-~~~~~~ 167 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALL-GARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLD-HISIRQ 167 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCC-EEEHHH
T ss_pred cCCCCEEEECccHHHHHHHHHHHHC-CCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccc-cCCHHH
Confidence 3478999999999999999999999 999999999988776543333444556666666521110 1111 223466
Q ss_pred HHHHHHHHHHcCCCcEEEccceeEEEEEe--CCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCC
Q 039605 180 FTSTIMSKLLARPNVKLFNAVAAEDLIVK--GNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPF 252 (352)
Q Consensus 180 ~~~~L~~~~~~~~gv~i~~~t~v~~l~~~--~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~ 252 (352)
+...|.+.+.+ .|++++++++++++..+ ++..+.+.+.. . .+|+..++++|.||+|+|..+..
T Consensus 168 l~~~L~~~~~~-~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~-------~--~~g~~~~i~ad~VV~A~G~~S~~ 232 (497)
T 2bry_A 168 LQLLLLKVALL-LGVEIHWGVKFTGLQPPPRKGSGWRAQLQP-------N--PPAQLASYEFDVLISAAGGKFVP 232 (497)
T ss_dssp HHHHHHHHHHH-TTCEEEESCEEEEEECCCSTTCCBEEEEES-------C--CCHHHHTCCBSEEEECCCTTCCC
T ss_pred HHHHHHHHHHh-CCCEEEeCCEEEEEEEecCCCCEEEEEEEE-------C--CCCCEEEEEcCEEEECCCCCccc
Confidence 77777777764 79999999999999874 23334555421 0 00122469999999999988753
No 64
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.33 E-value=2.6e-11 Score=113.12 Aligned_cols=169 Identities=14% Similarity=0.131 Sum_probs=117.6
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
-.|+|||+|..|+.+|..|++. |.+|+++++.+.... ..+..+.+.+
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~-g~~V~~v~~~~~~~~--------------------------------~~~~~~~l~~ 199 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDT-ARRITLIHRRPQFRA--------------------------------HEASVKELMK 199 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTT-SSEEEEECSSSSCCS--------------------------------CHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhh-CCEEEEEEcCCccCc--------------------------------cHHHHHHHHh
Confidence 4799999999999999999999 999999998764311 0122334444
Q ss_pred HHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCccccccc
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDMN 266 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~~ 266 (352)
.+. +.|+++++++.+.++.. ++++.++.+.. .. +|+..++.+|.||+|+|..+.... ....++..+
T Consensus 200 ~l~-~~gv~v~~~~~v~~i~~-~~~~~~v~~~~------~~---~g~~~~i~~D~vi~a~G~~p~~~~---l~~~~~~~~ 265 (335)
T 2zbw_A 200 AHE-EGRLEVLTPYELRRVEG-DERVRWAVVFH------NQ---TQEELALEVDAVLILAGYITKLGP---LANWGLALE 265 (335)
T ss_dssp HHH-TTSSEEETTEEEEEEEE-SSSEEEEEEEE------TT---TCCEEEEECSEEEECCCEEEECGG---GGGSCCCEE
T ss_pred ccc-cCCeEEecCCcceeEcc-CCCeeEEEEEE------CC---CCceEEEecCEEEEeecCCCCchH---hhhcceecc
Confidence 443 67999999999999987 45565666531 00 123468999999999996543321 111223334
Q ss_pred cccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHHcCCCCC
Q 039605 267 TAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNA 326 (352)
Q Consensus 267 ~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~l~~~~~ 326 (352)
.+...+.++.++..|++|++||+.... +.+ ..+..++.+|..+|..|.++|.+...
T Consensus 266 ~g~i~vd~~~~t~~~~vya~GD~~~~~-~~~---~~~~~A~~~g~~aa~~i~~~l~~~~~ 321 (335)
T 2zbw_A 266 KNKIKVDTTMATSIPGVYACGDIVTYP-GKL---PLIVLGFGEAAIAANHAAAYANPALK 321 (335)
T ss_dssp TTEEECCTTCBCSSTTEEECSTTEECT-TCC---CCHHHHHHHHHHHHHHHHHHHCTTSC
T ss_pred CCeeeeCCCCCCCCCCEEEeccccccC-cch---hhhhhhHHHHHHHHHHHHHHhhhhhc
Confidence 455556677788899999999998532 112 23445578999999999999976544
No 65
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.33 E-value=2.3e-11 Score=113.36 Aligned_cols=164 Identities=17% Similarity=0.177 Sum_probs=114.5
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
-.|+|||+|..|+-+|..|++. |.+|+++++.+.+.. . ..+.+
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~-g~~V~lv~~~~~~~~--------------------------------~----~~~~~ 202 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKY-GSKVYIIHRRDAFRA--------------------------------S----KIMQQ 202 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTT-SSEEEEECSSSSCCS--------------------------------C----HHHHH
T ss_pred CeEEEECCChHHHHHHHHHHhc-CCeEEEEecCCcCCc--------------------------------c----HHHHH
Confidence 4799999999999999999999 999999998764310 0 12233
Q ss_pred HHHcCCCcEEEccceeEEEEEeCC--EEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCccccc
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKGN--RVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALD 264 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~g--~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~ 264 (352)
++.++.|+++++++.+.++..+++ ++.++.+.+. .+|+..++.+|.||+|+|..+..... . ..+.
T Consensus 203 ~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~---------~~g~~~~i~~D~vi~a~G~~p~~~~~---~-~~l~ 269 (333)
T 1vdc_A 203 RALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNV---------VTGDVSDLKVSGLFFAIGHEPATKFL---D-GGVE 269 (333)
T ss_dssp HHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEET---------TTCCEEEEECSEEEECSCEEESCGGG---T-TSSC
T ss_pred HHHhCCCeeEecCCceEEEeCCCCccceeeEEEEec---------CCCceEEEecCEEEEEeCCccchHHh---h-cccc
Confidence 444578999999999999987665 6666666421 11234689999999999975543221 1 1232
Q ss_pred cc-cccceeecc-cccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHHcCCCCC
Q 039605 265 MN-TAEDAIVKL-TREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNA 326 (352)
Q Consensus 265 ~~-~g~~~vv~~-~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~l~~~~~ 326 (352)
.+ .+...+.++ ..+..|++|++||+.... ++ ....++.+|+.||..|.++|.+...
T Consensus 270 ~~~~G~i~vd~~~~~t~~~~vya~GD~~~~~---~~---~~~~A~~~g~~aa~~i~~~l~~~~~ 327 (333)
T 1vdc_A 270 LDSDGYVVTKPGTTQTSVPGVFAAGDVQDKK---YR---QAITAAGTGCMAALDAEHYLQEIGS 327 (333)
T ss_dssp BCTTSCBCCCTTSCBCSSTTEEECGGGGCSS---CC---CHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred ccCCCCEEechhhcccCCCCEEEeeeccCCC---ch---hHHHHHHhHHHHHHHHHHHHHhccc
Confidence 22 355444444 467899999999998532 12 2345578999999999999965544
No 66
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.33 E-value=5.2e-12 Score=119.75 Aligned_cols=127 Identities=17% Similarity=0.156 Sum_probs=86.0
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCC-cce---e-------------------------------
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGA-SGS---V------------------------------- 149 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~-~~~---~------------------------------- 149 (352)
.++||+|||||++|+++|++|+ + |++|+|||+++.+|++ ... .
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La-~-G~~V~vlE~~~~~g~~as~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 85 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLS-A-HGRVVVLEREAQPGYHSTGRSAAHYTVAYGTPQVRALTAASRAFFDNPPAGFCEH 85 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHT-T-TSCEEEECSSSSTTSSGGGSCCCEECSSSSCHHHHHHHHHHHHHHHSCCTTSCSS
T ss_pred CcCCEEEECCcHHHHHHHHHHh-C-CCCEEEEECCCCccccccccccceeecccCCHHHHHHHHHHHHHHHHhhhhhCCc
Confidence 4679999999999999999999 7 9999999998765532 100 0
Q ss_pred --ec---------c-------hHHHHHHHcCCccccC------------------CCeE----EEechHHHHHHHHHHHH
Q 039605 150 --VR---------K-------PAHLFLDELGIDYDEQ------------------DNYV----VIKHAALFTSTIMSKLL 189 (352)
Q Consensus 150 --~~---------~-------~~~~~l~~~Gi~~~~~------------------~~~~----~~~~~~~~~~~L~~~~~ 189 (352)
+. . ...+++..+|+++... ..+. ...+...+...|.+.+.
T Consensus 86 ~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~ 165 (381)
T 3nyc_A 86 PLLSPRPEMVVDFSDDPEELRRQYESGKALVPQMRLLDAEQACSIVPVLRRDKVFGATYDPTGADIDTDALHQGYLRGIR 165 (381)
T ss_dssp CSEEECCEEEECSSCCHHHHHHHHHHHHHHCTTCEEECHHHHHHHSTTBCGGGCCCEEEETTCEEECHHHHHHHHHHHHH
T ss_pred ccccccceEEEechHHHHHHHHHHHHHHHcCCCcEEeCHHHHHHhCCCcccccceEEEEcCCCceECHHHHHHHHHHHHH
Confidence 00 0 0112233344432110 0000 12344567777777776
Q ss_pred cCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 190 ARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 190 ~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
+.|++++++++|+++..++++ ++|.+.+ .+++||.||+|+|.++
T Consensus 166 -~~Gv~i~~~~~V~~i~~~~~~-~~V~t~~---------------g~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 166 -RNQGQVLCNHEALEIRRVDGA-WEVRCDA---------------GSYRAAVLVNAAGAWC 209 (381)
T ss_dssp -HTTCEEESSCCCCEEEEETTE-EEEECSS---------------EEEEESEEEECCGGGH
T ss_pred -HCCCEEEcCCEEEEEEEeCCe-EEEEeCC---------------CEEEcCEEEECCChhH
Confidence 469999999999999998876 4565532 3799999999999876
No 67
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.32 E-value=4.7e-12 Score=127.43 Aligned_cols=132 Identities=21% Similarity=0.215 Sum_probs=91.5
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCC-CcceeecchHHHHHHHcCCcc--------------cc--
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGG-ASGSVVRKPAHLFLDELGIDY--------------DE-- 167 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG-~~~~~~~~~~~~~l~~~Gi~~--------------~~-- 167 (352)
+++||+|||||++|+++|+.|+++ |++|+||||.+.... .....+.....+.++++|+.- ..
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~-G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 126 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAG-GVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIF 126 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHT-TCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCcc
Confidence 468999999999999999999999 999999999876542 233445555666666655421 00
Q ss_pred ------C-----CCeEEEechHHHHHHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeE
Q 039605 168 ------Q-----DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNV 236 (352)
Q Consensus 168 ------~-----~~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~ 236 (352)
. ..+....+...+.+.|.+.+.+ .|++++++++|+++..+++.+. +.+.. .++ ..+
T Consensus 127 ~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~-~gv~i~~~~~v~~l~~~~~~v~-v~~~~-------~~G----~~~ 193 (570)
T 3fmw_A 127 TQGLDFGLVDTRHPYTGLVPQSRTEALLAEHARE-AGAEIPRGHEVTRLRQDAEAVE-VTVAG-------PSG----PYP 193 (570)
T ss_dssp TTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHH-HTEECCBSCEEEECCBCSSCEE-EEEEE-------TTE----EEE
T ss_pred cccccccccCCCCCeeEEeCHHHHHHHHHHHHHh-CCCEEEeCCEEEEEEEcCCeEE-EEEEe-------CCC----cEE
Confidence 0 0111233456677777777764 5999999999999998877654 44421 011 158
Q ss_pred EEeCEEEEccCCCC
Q 039605 237 MEAKVVVSSCGHDG 250 (352)
Q Consensus 237 i~A~~VIlAtG~~~ 250 (352)
++|++||.|+|.++
T Consensus 194 ~~a~~vV~ADG~~S 207 (570)
T 3fmw_A 194 VRARYGVGCDGGRS 207 (570)
T ss_dssp EEESEEEECSCSSC
T ss_pred EEeCEEEEcCCCCc
Confidence 99999999999887
No 68
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.32 E-value=1.2e-11 Score=117.66 Aligned_cols=128 Identities=19% Similarity=0.301 Sum_probs=86.9
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCc---cee----ecc--------h-----------------
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGAS---GSV----VRK--------P----------------- 153 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~---~~~----~~~--------~----------------- 153 (352)
++||+|||||++|+++|++|+++ |++|+|||+....++.+ ... +.. .
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~-G~~V~lle~~~~~~gas~~~~g~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~ 83 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKR-GEEVTVIEKRFIGSGSTFRCGTGIRQQFNDEANVRVMKRSVELWKKYSEEYGFSFK 83 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSTTCSHHHHCCCCCCCCCSSHHHHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCCCCccccccCeeeecCCChHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 68999999999999999999999 99999999985433220 000 000 0
Q ss_pred -------------------HHHHHHHcCCccccC--------------CCe----E----EEechHHHHHHHHHHHHcCC
Q 039605 154 -------------------AHLFLDELGIDYDEQ--------------DNY----V----VIKHAALFTSTIMSKLLARP 192 (352)
Q Consensus 154 -------------------~~~~l~~~Gi~~~~~--------------~~~----~----~~~~~~~~~~~L~~~~~~~~ 192 (352)
..+++.++|+++... ..+ . ...+...+...|.+.+. +.
T Consensus 84 ~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~ 162 (382)
T 1y56_B 84 QTGYLFLLYDDEEVKTFKRNIEIQNKFGVPTKLITPEEAKEIVPLLDISEVIAASWNPTDGKADPFEATTAFAVKAK-EY 162 (382)
T ss_dssp CCCEEEEECSHHHHHHHHHHHHHHHHTTCCCEEECHHHHHHSSTTCCCTTCCEEEEETTCCEECHHHHHHHHHHHHH-HT
T ss_pred ccceEEEEeCHHHHHHHHHHHHHHHhcCCCcEEeCHHHHHHhCCCCCcccceEEEEcCCCeeECHHHHHHHHHHHHH-HC
Confidence 011222334332110 000 0 01234566677777776 56
Q ss_pred CcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 193 NVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 193 gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
|++++++++|+++..+++++.++.+.+ .+++||.||+|+|.++
T Consensus 163 Gv~i~~~~~v~~i~~~~~~v~gv~~~~---------------g~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 163 GAKLLEYTEVKGFLIENNEIKGVKTNK---------------GIIKTGIVVNATNAWA 205 (382)
T ss_dssp TCEEECSCCEEEEEESSSBEEEEEETT---------------EEEECSEEEECCGGGH
T ss_pred CCEEECCceEEEEEEECCEEEEEEECC---------------cEEECCEEEECcchhH
Confidence 999999999999999888888787643 2799999999999875
No 69
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.32 E-value=9.2e-12 Score=125.11 Aligned_cols=135 Identities=22% Similarity=0.281 Sum_probs=88.7
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCccee---ec-------c-------h--------------
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSV---VR-------K-------P-------------- 153 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~---~~-------~-------~-------------- 153 (352)
.+|||||||||++|+++|+.|+++ |++|+||||++..+|++... +. . .
T Consensus 17 ~~~DVvVIGgGi~Gl~~A~~La~~-G~~V~LlEk~d~~~GtS~~ss~lihgG~ryl~~~~~~l~~e~~~e~~~l~~~ap~ 95 (561)
T 3da1_A 17 KQLDLLVIGGGITGAGIALDAQVR-GIQTGLVEMNDFASGTSSRSTKLVHGGLRYLKQFEIKLVAEVGKERAIVYENAPH 95 (561)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHTT-TCCEEEEESSSTTCSGGGSSCCEECC---------------CHHHHHHHHHHCTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-CCcEEEEECCCCCCCcccCCcCccccchHHHHhcCHHHHHHHHHHHHHHHHhCch
Confidence 479999999999999999999999 99999999997766542110 00 0 0
Q ss_pred ----------------HHHHHHHcCCcc-c-------------------------cC-C----CeE---EEechHHHHHH
Q 039605 154 ----------------AHLFLDELGIDY-D-------------------------EQ-D----NYV---VIKHAALFTST 183 (352)
Q Consensus 154 ----------------~~~~l~~~Gi~~-~-------------------------~~-~----~~~---~~~~~~~~~~~ 183 (352)
...|....+..+ + .. . .+. ...+...+...
T Consensus 96 l~~~~~~~~p~~~~~~~~~~~~~~g~~~~d~l~~~~~~~~~~~l~~~~~~~~~P~l~~~~~~gg~~~~dg~vd~~~l~~~ 175 (561)
T 3da1_A 96 VTTPEWMLLPIFKDGTFGKFSTSLGLKVYDYLADVRKDERRYMLNEKQTLEKEPLLRKENLKGGGIYVEYRTDDARLTLE 175 (561)
T ss_dssp TCEEEEEEEEECC---------------------------CEEECHHHHHHHCTTSCCTTCCEEEEEEEEECCHHHHHHH
T ss_pred hccccceeEeecCCccHHHHHHHhHHHHHHHhhcccCCCCcEEECHHHHHHhCccCChhhceeEEEecCceEcHHHHHHH
Confidence 000000000000 0 00 0 000 01223456666
Q ss_pred HHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 184 IMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 184 L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
+.+.+. +.|++++++++|+++..++++++++.+.+. .+|+..+++|+.||+|+|.|+
T Consensus 176 L~~~a~-~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~---------~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 176 IMKEAV-ARGAVALNYMKVESFIYDQGKVVGVVAKDR---------LTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHH-HTTCEEEESEEEEEEEEETTEEEEEEEEET---------TTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHH-HcCCEEEcCCEEEEEEEcCCeEEEEEEEEc---------CCCceEEEECCEEEECCCcch
Confidence 666665 569999999999999999999999987541 112346899999999999886
No 70
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.32 E-value=1.9e-11 Score=116.95 Aligned_cols=160 Identities=15% Similarity=0.084 Sum_probs=113.2
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
-+++|||+|..|+.+|..|++. |.+|+++|+.+.+... ....++.+.+.+
T Consensus 146 ~~v~ViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~~~~-----------------------------~~~~~~~~~l~~ 195 (384)
T 2v3a_A 146 RRVLLLGAGLIGCEFANDLSSG-GYQLDVVAPCEQVMPG-----------------------------LLHPAAAKAVQA 195 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSSSTT-----------------------------TSCHHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCeEEEEecCcchhhc-----------------------------ccCHHHHHHHHH
Confidence 4799999999999999999999 9999999998654210 001334455555
Q ss_pred HHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCccccccc
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDMN 266 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~~ 266 (352)
.+. +.|+++++++++.++..+++.+ .+.+.+ ..++.+|.||+|+|..+.... ....++..+
T Consensus 196 ~l~-~~gv~i~~~~~v~~i~~~~~~~-~v~~~~--------------g~~i~~d~vv~a~G~~p~~~l---~~~~g~~~~ 256 (384)
T 2v3a_A 196 GLE-GLGVRFHLGPVLASLKKAGEGL-EAHLSD--------------GEVIPCDLVVSAVGLRPRTEL---AFAAGLAVN 256 (384)
T ss_dssp HHH-TTTCEEEESCCEEEEEEETTEE-EEEETT--------------SCEEEESEEEECSCEEECCHH---HHHTTCCBS
T ss_pred HHH-HcCCEEEeCCEEEEEEecCCEE-EEEECC--------------CCEEECCEEEECcCCCcCHHH---HHHCCCCCC
Confidence 554 6799999999999998876643 455432 257999999999997654321 111223334
Q ss_pred cccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHH
Q 039605 267 TAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 319 (352)
Q Consensus 267 ~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~ 319 (352)
.+ +.+.+++++..|++|++||+.... + .+.+.+..+..+|+.+|..++.
T Consensus 257 ~g-i~vd~~~~t~~~~IyA~GD~~~~~-~--~~~~~~~~a~~~g~~~a~~i~g 305 (384)
T 2v3a_A 257 RG-IVVDRSLRTSHANIYALGDCAEVD-G--LNLLYVMPLMACARALAQTLAG 305 (384)
T ss_dssp SS-EEECTTCBCSSTTEEECGGGEEET-T--BCCCSHHHHHHHHHHHHHHHTT
T ss_pred CC-EEECCCCCCCCCCEEEeeeeeeEC-C--CCcchHHHHHHHHHHHHHHhcC
Confidence 45 566677889999999999998532 1 1123344557789999988874
No 71
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.32 E-value=2.6e-11 Score=112.83 Aligned_cols=166 Identities=17% Similarity=0.178 Sum_probs=115.3
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
-.|+|||+|..|+-+|..|++. |.+|+++++.+.+.. . ..+.+
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~-g~~Vtlv~~~~~~~~--------------------------------~----~~~~~ 195 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKF-ADEVTVIHRRDTLRA--------------------------------N----KVAQA 195 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT-CSEEEEECSSSSCCS--------------------------------C----HHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhc-CCEEEEEeCCCcCCc--------------------------------c----hHHHH
Confidence 4799999999999999999999 999999998764310 0 12344
Q ss_pred HHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCccccccc
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDMN 266 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~~ 266 (352)
++.++.|+++++++++.++..+ +++.++.+.+ .. +|+..++.+|.||+|+|..+.... .... +..+
T Consensus 196 ~l~~~~gv~i~~~~~v~~i~~~-~~v~~v~~~~------~~---~g~~~~i~~D~vi~a~G~~p~~~~---l~~~-~~~~ 261 (325)
T 2q7v_A 196 RAFANPKMKFIWDTAVEEIQGA-DSVSGVKLRN------LK---TGEVSELATDGVFIFIGHVPNTAF---VKDT-VSLR 261 (325)
T ss_dssp HHHTCTTEEEECSEEEEEEEES-SSEEEEEEEE------TT---TCCEEEEECSEEEECSCEEESCGG---GTTT-SCBC
T ss_pred HHHhcCCceEecCCceEEEccC-CcEEEEEEEE------CC---CCcEEEEEcCEEEEccCCCCChHH---Hhhh-cccC
Confidence 5554579999999999999874 5666676642 01 123458999999999996543322 1111 2222
Q ss_pred -cccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHHcCCCCCCCC
Q 039605 267 -TAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNAMDG 329 (352)
Q Consensus 267 -~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~l~~~~~~~~ 329 (352)
.+...+.++.++..|++|++||+.... ++ .+..++.+|..||..|..+|.+.....+
T Consensus 262 ~~g~i~vd~~~~t~~~~vya~GD~~~~~---~~---~~~~A~~~g~~aa~~i~~~l~~~~~~~~ 319 (325)
T 2q7v_A 262 DDGYVDVRDEIYTNIPMLFAAGDVSDYI---YR---QLATSVGAGTRAAMMTERQLAALEVEGE 319 (325)
T ss_dssp TTSCBCCBTTTBCSSTTEEECSTTTCSS---CC---CHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred CCccEecCCCCccCCCCEEEeecccCcc---HH---HHHHHHHHHHHHHHHHHHHHHHhhccce
Confidence 355566677788899999999998531 12 3445688999999999999976554433
No 72
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.31 E-value=6.4e-11 Score=117.11 Aligned_cols=165 Identities=15% Similarity=0.102 Sum_probs=115.2
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHH
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIM 185 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~ 185 (352)
.-.|+|||+|..|+.+|..|++. |.+|+++|+.+.+... ...++.+.+.
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~~l~~------------------------------~d~~~~~~l~ 222 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRL-GVIVKVFGRSGSVANL------------------------------QDEEMKRYAE 222 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHT-TCEEEEECCTTCCTTC------------------------------CCHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CCeEEEEEECCccccc------------------------------CCHHHHHHHH
Confidence 34799999999999999999999 9999999998754210 1234445555
Q ss_pred HHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCcccccc
Q 039605 186 SKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDM 265 (352)
Q Consensus 186 ~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~ 265 (352)
+.+. +. +++++++.+.++..+++++. +.+.+ .+|+..++.+|.||+|+|..+.....+. ...++..
T Consensus 223 ~~l~-~~-V~i~~~~~v~~i~~~~~~v~-v~~~~----------~~G~~~~i~~D~Vi~a~G~~p~~~~l~l-~~~gl~~ 288 (492)
T 3ic9_A 223 KTFN-EE-FYFDAKARVISTIEKEDAVE-VIYFD----------KSGQKTTESFQYVLAATGRKANVDKLGL-ENTSIEL 288 (492)
T ss_dssp HHHH-TT-SEEETTCEEEEEEECSSSEE-EEEEC----------TTCCEEEEEESEEEECSCCEESCSSSCG-GGSCCCB
T ss_pred HHHh-hC-cEEEECCEEEEEEEcCCEEE-EEEEe----------CCCceEEEECCEEEEeeCCccCCCCCCh-hhcCCEE
Confidence 5554 44 99999999999988776654 33321 0123468999999999997554322111 1112333
Q ss_pred c-cccceee-cccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHHcC
Q 039605 266 N-TAEDAIV-KLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLG 322 (352)
Q Consensus 266 ~-~g~~~vv-~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~l~ 322 (352)
+ .|...+. +++++..|++|++||+.... +....+..+|+.||..|+.+..
T Consensus 289 ~~~G~i~vd~~~~~t~~~~IyA~GD~~~~~-------~~~~~A~~~g~~aa~~i~~~~~ 340 (492)
T 3ic9_A 289 DKKNSPLFDELTLQTSVDHIFVAGDANNTL-------TLLHEAADDGKVAGTNAGAYPV 340 (492)
T ss_dssp CTTCCBCCCTTTCBCSSTTEEECGGGGTSS-------CSHHHHHHHHHHHHHHHHHTTS
T ss_pred CCCCCEeECcccccCCCCCEEEEEecCCCC-------ccHHHHHHHHHHHHHHHcCCCC
Confidence 3 4555556 67889999999999998531 2334567899999999997643
No 73
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.31 E-value=2.7e-11 Score=122.25 Aligned_cols=130 Identities=16% Similarity=0.277 Sum_probs=89.0
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC-CCCCC-cceeecc----hHH-----------HHHHHcCCcccc
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV-SPGGA-SGSVVRK----PAH-----------LFLDELGIDYDE 167 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~-~~GG~-~~~~~~~----~~~-----------~~l~~~Gi~~~~ 167 (352)
.+|||+|||||++|+.||+.|++. |.+|+|||+.. ..|+. +...... ... .++...++.|..
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~-G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~ 98 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARG-GLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRM 98 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHC-CCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhh
Confidence 368999999999999999999999 99999999974 34332 1111110 011 222333444321
Q ss_pred C-----CC---eEEEechHHHHHHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEe
Q 039605 168 Q-----DN---YVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEA 239 (352)
Q Consensus 168 ~-----~~---~~~~~~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A 239 (352)
. .. .....+...+...+.+.+.+.+|++++.. .|.++..+++++.||.+.+| .++.|
T Consensus 99 l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~-~V~~L~~d~g~V~GV~t~~G--------------~~i~A 163 (641)
T 3cp8_A 99 LNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQD-TVIGVSANSGKFSSVTVRSG--------------RAIQA 163 (641)
T ss_dssp ECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEEC-CEEEEEEETTEEEEEEETTS--------------CEEEE
T ss_pred cccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEee-EEEEEEecCCEEEEEEECCC--------------cEEEe
Confidence 1 00 11123445677777777765579999655 89999998899988887542 58999
Q ss_pred CEEEEccCCCC
Q 039605 240 KVVVSSCGHDG 250 (352)
Q Consensus 240 ~~VIlAtG~~~ 250 (352)
+.||+|||.++
T Consensus 164 d~VVLATG~~s 174 (641)
T 3cp8_A 164 KAAILACGTFL 174 (641)
T ss_dssp EEEEECCTTCB
T ss_pred CEEEECcCCCC
Confidence 99999999874
No 74
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.30 E-value=4.4e-11 Score=119.18 Aligned_cols=63 Identities=11% Similarity=0.211 Sum_probs=46.2
Q ss_pred echHHHHHHHHHHHHcCCCcEEEccceeEEEEEeC-CEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCC
Q 039605 175 KHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-NRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPF 252 (352)
Q Consensus 175 ~~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~-g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~ 252 (352)
.+...+.+.|.+.+.+..|++++++ +|+++..++ +.+.++.+.+| .+++||.||.|+|.++..
T Consensus 172 ~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g--------------~~i~ad~vV~AdG~~S~~ 235 (526)
T 2pyx_A 172 LNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQN--------------GEISGQLFIDCTGAKSLL 235 (526)
T ss_dssp ECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSS--------------CEEECSEEEECSGGGCCC
T ss_pred EcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCC--------------CEEEcCEEEECCCcchHH
Confidence 3445666777777764379999999 699998864 45556666432 359999999999988754
No 75
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.30 E-value=2.3e-11 Score=116.81 Aligned_cols=132 Identities=16% Similarity=0.162 Sum_probs=85.5
Q ss_pred ccCCCCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCC---cceeec-chHHHHHHHcCCcc-----------
Q 039605 101 MITHADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGA---SGSVVR-KPAHLFLDELGIDY----------- 165 (352)
Q Consensus 101 ~~~~~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~---~~~~~~-~~~~~~l~~~Gi~~----------- 165 (352)
|+.+.++||+|||||++|+++|+.|++. |++|+||||.+.++.. ....+. ....+.++++|+.-
T Consensus 21 M~~~~~~dV~IVGaG~aGl~~A~~L~~~-G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~ 99 (398)
T 2xdo_A 21 MNLLSDKNVAIIGGGPVGLTMAKLLQQN-GIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGV 99 (398)
T ss_dssp --CCTTCEEEEECCSHHHHHHHHHHHTT-TCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCE
T ss_pred ccccCCCCEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccce
Confidence 4444578999999999999999999999 9999999998654321 111111 12345566555421
Q ss_pred ---ccCCCe-------------EEEechHHHHHHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCC
Q 039605 166 ---DEQDNY-------------VVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQ 229 (352)
Q Consensus 166 ---~~~~~~-------------~~~~~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~ 229 (352)
+..+.. ....+...+.+.|.+.+. +++++++++|+++..+++++. +.+.++
T Consensus 100 ~~~~~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~---~~~i~~~~~v~~i~~~~~~v~-v~~~~g--------- 166 (398)
T 2xdo_A 100 NIADEKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLE---NDTVIWDRKLVMLEPGKKKWT-LTFENK--------- 166 (398)
T ss_dssp EEECSSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSC---TTSEEESCCEEEEEECSSSEE-EEETTS---------
T ss_pred EEECCCCCchhhccccccCCCCCceECHHHHHHHHHhhcC---CCEEEECCEEEEEEECCCEEE-EEECCC---------
Confidence 000000 011234455566665442 367899999999998776553 444331
Q ss_pred CCCCCeEEEeCEEEEccCCCCC
Q 039605 230 SCMDPNVMEAKVVVSSCGHDGP 251 (352)
Q Consensus 230 ~~g~~~~i~A~~VIlAtG~~~~ 251 (352)
.++++|.||.|+|.++.
T Consensus 167 -----~~~~ad~vV~AdG~~S~ 183 (398)
T 2xdo_A 167 -----PSETADLVILANGGMSK 183 (398)
T ss_dssp -----CCEEESEEEECSCTTCS
T ss_pred -----cEEecCEEEECCCcchh
Confidence 47999999999999875
No 76
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.30 E-value=3.2e-11 Score=120.85 Aligned_cols=136 Identities=15% Similarity=0.212 Sum_probs=90.8
Q ss_pred ccCCCCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCC-cceeecchHHHHHHHcCCc---------ccc---
Q 039605 101 MITHADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGA-SGSVVRKPAHLFLDELGID---------YDE--- 167 (352)
Q Consensus 101 ~~~~~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~-~~~~~~~~~~~~l~~~Gi~---------~~~--- 167 (352)
|..+.++||+|||||++|+++|+.|+++ |++|+||||.+..+.. ....+.....+.++++|+. ...
T Consensus 21 M~~~~~~dVlIVGaGpaGl~~A~~La~~-G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~ 99 (549)
T 2r0c_A 21 MNAPIETDVLILGGGPVGMALALDLAHR-QVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLD 99 (549)
T ss_dssp -CCCEEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCC
T ss_pred cCCCCCCCEEEECcCHHHHHHHHHHHHC-CCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccc
Confidence 3334568999999999999999999999 9999999998766432 3344445555666655432 100
Q ss_pred -------CCC-e--------------------EEEechHHHHHHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcc
Q 039605 168 -------QDN-Y--------------------VVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNW 219 (352)
Q Consensus 168 -------~~~-~--------------------~~~~~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~ 219 (352)
.+. + ....+...+.+.|.+.+.+. ++++++++++..++++++ +.+.+
T Consensus 100 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~----v~~~~~v~~~~~~~~~v~-v~~~~ 174 (549)
T 2r0c_A 100 AAWVTRVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER----LRTRSRLDSFEQRDDHVR-ATITD 174 (549)
T ss_dssp EEEESSBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG----EECSEEEEEEEECSSCEE-EEEEE
T ss_pred eEEeccCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh----cccCcEEEEEEEeCCEEE-EEEEE
Confidence 000 0 01223345556777776543 899999999998877765 43322
Q ss_pred cceeccCCCCCCCCCeEEEeCEEEEccCCCCC
Q 039605 220 ALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGP 251 (352)
Q Consensus 220 g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~ 251 (352)
.. +|+..+++||+||.|+|.++.
T Consensus 175 ------~~---~G~~~~i~a~~vVgADG~~S~ 197 (549)
T 2r0c_A 175 ------LR---TGATRAVHARYLVACDGASSP 197 (549)
T ss_dssp ------TT---TCCEEEEEEEEEEECCCTTCH
T ss_pred ------CC---CCCEEEEEeCEEEECCCCCcH
Confidence 01 123468999999999999873
No 77
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.30 E-value=2.8e-11 Score=116.59 Aligned_cols=134 Identities=19% Similarity=0.284 Sum_probs=91.0
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCc-EEEEeccCCCCCC-cceeecchHHHHHHHcCCc---------cc------cC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQ-VAIIEQSVSPGGA-SGSVVRKPAHLFLDELGID---------YD------EQ 168 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~k-V~viEk~~~~GG~-~~~~~~~~~~~~l~~~Gi~---------~~------~~ 168 (352)
++||+|||||++|+++|+.|++. |++ |+||||.+.++.. ....+.....+.++.+|+. .. ..
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~-G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~~ 82 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQA-GIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQS 82 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcCC
Confidence 57999999999999999999999 999 9999998765432 3344445556666666652 10 00
Q ss_pred CCe---------------EEEechHHHHHHHHHHHHcCCC-cEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCC
Q 039605 169 DNY---------------VVIKHAALFTSTIMSKLLARPN-VKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCM 232 (352)
Q Consensus 169 ~~~---------------~~~~~~~~~~~~L~~~~~~~~g-v~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g 232 (352)
+.. ....+...+.+.|.+.+.+..| ++++++++++++.. ++.+. +.+.+. . +|
T Consensus 83 g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~-v~~~~~------~---~g 151 (410)
T 3c96_A 83 GATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGRV-LIGARD------G---HG 151 (410)
T ss_dssp SCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTEE-EEEEEE------T---TS
T ss_pred CCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCccE-EEEecC------C---CC
Confidence 000 1233455677778877764334 68999999999988 54443 333220 0 01
Q ss_pred CCeEEEeCEEEEccCCCCC
Q 039605 233 DPNVMEAKVVVSSCGHDGP 251 (352)
Q Consensus 233 ~~~~i~A~~VIlAtG~~~~ 251 (352)
+..+++||.||.|+|.++.
T Consensus 152 ~~~~~~ad~vV~AdG~~S~ 170 (410)
T 3c96_A 152 KPQALGADVLVGADGIHSA 170 (410)
T ss_dssp CEEEEEESEEEECCCTTCH
T ss_pred CceEEecCEEEECCCccch
Confidence 2358999999999998873
No 78
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.29 E-value=2.5e-11 Score=119.64 Aligned_cols=163 Identities=17% Similarity=0.151 Sum_probs=114.9
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHH
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIM 185 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~ 185 (352)
..+|+|||+|+.|+.+|..|++. |.+|+++|+.+.+... ...++.+.+.
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~~------------------------------~~~~~~~~l~ 234 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVEL-GKKVRMIERNDHIGTI------------------------------YDGDMAEYIY 234 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHT-TCEEEEECCGGGTTSS------------------------------SCHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhc-CCeEEEEEeCCchhhc------------------------------CCHHHHHHHH
Confidence 35899999999999999999999 9999999998643210 0134444555
Q ss_pred HHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCcccccc
Q 039605 186 SKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDM 265 (352)
Q Consensus 186 ~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~ 265 (352)
+.+. +.|+++++++.+.++..+ +++..+.+. ..++.+|.||+|+|..+.... ....++..
T Consensus 235 ~~l~-~~Gv~i~~~~~v~~i~~~-~~v~~v~~~---------------~~~i~~D~vi~a~G~~p~~~~---l~~~g~~~ 294 (480)
T 3cgb_A 235 KEAD-KHHIEILTNENVKAFKGN-ERVEAVETD---------------KGTYKADLVLVSVGVKPNTDF---LEGTNIRT 294 (480)
T ss_dssp HHHH-HTTCEEECSCCEEEEEES-SBEEEEEET---------------TEEEECSEEEECSCEEESCGG---GTTSCCCB
T ss_pred HHHH-HcCcEEEcCCEEEEEEcC-CcEEEEEEC---------------CCEEEcCEEEECcCCCcChHH---HHhCCccc
Confidence 5554 579999999999998764 556555542 147999999999997644322 11222332
Q ss_pred c-cccceeecccccccCceeEecchhhhhc---CCCCCCcchhhhhhchHHHHHHHHH
Q 039605 266 N-TAEDAIVKLTREIVPGMIVAGMEVAEID---GAPRMGPTFGAMMISGQKAAHLALK 319 (352)
Q Consensus 266 ~-~g~~~vv~~~~~~~pg~~~aG~~~~~~~---g~~r~g~~~~~~~~sG~~aA~~i~~ 319 (352)
+ .+.+.+.+++++..|++|++||+..... |.+...+.+..+..+|+.||..|..
T Consensus 295 ~~~G~I~Vd~~~~ts~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 352 (480)
T 3cgb_A 295 NHKGAIEVNAYMQTNVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLAGLNMLD 352 (480)
T ss_dssp CTTSCBCCCTTSBCSSTTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCCEEECCCccCCCCCEEEeeeEEEecCCCCCcceecchHHHHHHHHHHHHHHhcC
Confidence 2 3556667888889999999999986432 2211223455678899999999874
No 79
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.29 E-value=2.1e-11 Score=116.72 Aligned_cols=57 Identities=16% Similarity=0.186 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 178 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 178 ~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
..+...|.+.+. +.|++++++++|+++..++++++++.+.+ .+++||.||+|+|.++
T Consensus 174 ~~~~~~l~~~~~-~~g~~i~~~~~v~~i~~~~~~~~~v~~~~---------------g~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 174 DHVAWAFARKAN-EMGVDIIQNCEVTGFIKDGEKVTGVKTTR---------------GTIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHHHHHHH-HTTCEEECSCCEEEEEESSSBEEEEEETT---------------CCEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHH-HCCCEEEcCCeEEEEEEeCCEEEEEEeCC---------------ceEECCEEEECCchhH
Confidence 356666777776 46999999999999999888887777643 1699999999999876
No 80
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.29 E-value=9.7e-12 Score=120.95 Aligned_cols=164 Identities=13% Similarity=0.103 Sum_probs=114.8
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
-.|+|||+|..|+.+|..|++. |.+|+++|+.+.+... ....++...+.+
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~-G~~Vtlv~~~~~~l~~-----------------------------~~~~~~~~~l~~ 199 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKA-NMHVTLLDTAARVLER-----------------------------VTAPPVSAFYEH 199 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSTTTT-----------------------------TSCHHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCEEEEEEeCCccccc-----------------------------hhhHHHHHHHHH
Confidence 4799999999999999999999 9999999987643210 001233344444
Q ss_pred HHHcCCCcEEEccceeEEEEE--eCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCccccc
Q 039605 187 KLLARPNVKLFNAVAAEDLIV--KGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALD 264 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~--~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~ 264 (352)
.+. +.|+++++++.+.++.. +++++.++.+.+| .++.+|.||+|+|..+.... ....++.
T Consensus 200 ~l~-~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G--------------~~i~~D~Vv~a~G~~p~~~l---~~~~gl~ 261 (431)
T 1q1r_A 200 LHR-EAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDG--------------TRLPADLVIAGIGLIPNCEL---ASAAGLQ 261 (431)
T ss_dssp HHH-HHTCEEECSCCEEEEEECTTTCCEEEEEETTS--------------CEEECSEEEECCCEEECCHH---HHHTTCC
T ss_pred HHH-hCCeEEEeCCEEEEEEeccCCCcEEEEEeCCC--------------CEEEcCEEEECCCCCcCcch---hhccCCC
Confidence 444 56999999999999987 5677777776432 57999999999996543211 1112233
Q ss_pred cccccceeecccccccCceeEecchhhhhc---CCCCCCcchhhhhhchHHHHHHHHH
Q 039605 265 MNTAEDAIVKLTREIVPGMIVAGMEVAEID---GAPRMGPTFGAMMISGQKAAHLALK 319 (352)
Q Consensus 265 ~~~g~~~vv~~~~~~~pg~~~aG~~~~~~~---g~~r~g~~~~~~~~sG~~aA~~i~~ 319 (352)
.+.+ +.+.+++++..|++|++||+..... |.....+.+..+..+|+.+|..|+.
T Consensus 262 ~~~g-i~Vd~~~~ts~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 318 (431)
T 1q1r_A 262 VDNG-IVINEHMQTSDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAILCG 318 (431)
T ss_dssp BSSS-EECCTTSBCSSTTEEECGGGEEEEETTTTEEEECCSHHHHHHHHHHHHHHHTT
T ss_pred CCCC-EEECCCcccCCCCEEEEEeEEEEccccCCceEeeCHHHHHHHHHHHHHHHhcC
Confidence 3444 4566778889999999999986532 1111123455668899999999874
No 81
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.28 E-value=4.8e-11 Score=122.48 Aligned_cols=129 Identities=16% Similarity=0.204 Sum_probs=86.6
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCC-cc---eeec------c------------hHHHHHHHcCC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGA-SG---SVVR------K------------PAHLFLDELGI 163 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~-~~---~~~~------~------------~~~~~l~~~Gi 163 (352)
.+||||||||++|+++|+.|+++ |++|+||||...+|++ .. ..+. . ...++++++++
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~~-G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 350 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLRR-GWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRFYDQLPV 350 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSSSSSCSTTCCSCEEECCCCCSSCHHHHHHHHHHHHHHHHHHHHCCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCcccccCccCCCceecCcCCCCccHHHHHHHHHHHHHHHHHHHCCC
Confidence 48999999999999999999999 9999999997655532 10 0000 0 01222333322
Q ss_pred cccc--CC----------------------------------------------CeE----EEechHHHHHHHHHHHHcC
Q 039605 164 DYDE--QD----------------------------------------------NYV----VIKHAALFTSTIMSKLLAR 191 (352)
Q Consensus 164 ~~~~--~~----------------------------------------------~~~----~~~~~~~~~~~L~~~~~~~ 191 (352)
.+.. .+ .+. ...+...+...|.+.+. +
T Consensus 351 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~g~v~p~~l~~aL~~~a~-~ 429 (676)
T 3ps9_A 351 KFDHDWCGVTQLGWDEKSQHKIAQMLSMDLPAELAVAVEANAVEQITGVATNCSGITYPQGGWLCPAELTRNVLELAQ-Q 429 (676)
T ss_dssp CCCEECCCEEEECCSHHHHHHHHHHHTSCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTCEEECHHHHHHHHHHHHH-H
T ss_pred CcCcCcCCeeeecCCHHHHHHHHHHHhcCCcHHHhhhCCHHHHHHhhCCCccCCcEEecCCeeeCHHHHHHHHHHHHH-h
Confidence 1110 00 000 01234566677777776 4
Q ss_pred CCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCC
Q 039605 192 PNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGP 251 (352)
Q Consensus 192 ~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~ 251 (352)
.|++++++++|++|..+++++ .|.+.++ .+++||.||+|+|.++.
T Consensus 430 ~Gv~i~~~t~V~~l~~~~~~v-~V~t~~G--------------~~i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 430 QGLQIYYQYQLQNFSRKDDCW-LLNFAGD--------------QQATHSVVVLANGHQIS 474 (676)
T ss_dssp TTCEEEESCCEEEEEEETTEE-EEEETTS--------------CEEEESEEEECCGGGGG
T ss_pred CCCEEEeCCeeeEEEEeCCeE-EEEECCC--------------CEEECCEEEECCCcchh
Confidence 699999999999999998875 5665331 46999999999999864
No 82
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.28 E-value=4.3e-11 Score=117.39 Aligned_cols=162 Identities=15% Similarity=0.133 Sum_probs=113.0
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
-.++|||||..|+.+|..|++. |.+|+|+|+.+.+... ...++.+.+.+
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~~------------------------------~~~~~~~~l~~ 218 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRL-GAEVTLIEYMPEILPQ------------------------------GDPETAALLRR 218 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSSTT------------------------------SCHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCeEEEEEcCCccccc------------------------------cCHHHHHHHHH
Confidence 4799999999999999999999 9999999998654210 11334444455
Q ss_pred HHHcCCCcEEEccceeEEEEEeCCEEEEEEEc-ccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCcccccc
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKGNRVGGIVTN-WALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDM 265 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~-~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~ 265 (352)
.+. +.|+++++++.+.++..+++.+ .+.+. + .+ |+..++.+|.||+|+|..+.....+. ...++..
T Consensus 219 ~l~-~~gV~i~~~~~v~~i~~~~~~~-~v~~~~~-------~~---g~~~~i~~D~vv~a~G~~p~~~~l~l-~~~g~~~ 285 (464)
T 2eq6_A 219 ALE-KEGIRVRTKTKAVGYEKKKDGL-HVRLEPA-------EG---GEGEEVVVDKVLVAVGRKPRTEGLGL-EKAGVKV 285 (464)
T ss_dssp HHH-HTTCEEECSEEEEEEEEETTEE-EEEEEET-------TC---CSCEEEEESEEEECSCEEESCTTSSH-HHHTCCB
T ss_pred HHH-hcCCEEEcCCEEEEEEEeCCEE-EEEEeec-------CC---CceeEEEcCEEEECCCcccCCCCCCh-hhcCcee
Confidence 554 5799999999999998876654 24442 1 00 13358999999999997654322111 1112333
Q ss_pred -ccccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHH
Q 039605 266 -NTAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 319 (352)
Q Consensus 266 -~~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~ 319 (352)
+.+.+.+.+++++..|++|++||+... +. ....+..+|+.||..|..
T Consensus 286 ~~~G~i~vd~~~~t~~~~Iya~GD~~~~----~~---l~~~A~~~g~~aa~~i~g 333 (464)
T 2eq6_A 286 DERGFIRVNARMETSVPGVYAIGDAARP----PL---LAHKAMREGLIAAENAAG 333 (464)
T ss_dssp CTTSCBCCCTTCBCSSTTEEECGGGTCS----SC---CHHHHHHHHHHHHHHHTT
T ss_pred cCCCCEEECCCcccCCCCEEEEeccCCC----cc---cHHHHHHHHHHHHHHhcC
Confidence 345666778888999999999999843 11 234557899999999874
No 83
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.28 E-value=2.9e-11 Score=120.44 Aligned_cols=162 Identities=18% Similarity=0.131 Sum_probs=117.7
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
-.|+|||+|..|+-+|..|++. |.+|+++++.+.... . ..+.+
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~-g~~Vtlv~~~~~l~~--------------------------------~----~~l~~ 398 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGI-VEHVTLLEFAPEMKA--------------------------------D----QVLQD 398 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH-BSEEEEECSSSSCCS--------------------------------C----HHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhh-CCEEEEEEeCcccCc--------------------------------C----HHHHH
Confidence 4799999999999999999999 999999998764310 0 12344
Q ss_pred HHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCcccccc-
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDM- 265 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~- 265 (352)
++.+..|+++++++.++++..+++++.++.+.+. .+|+..++.+|.||+|+|..+.... ... .+..
T Consensus 399 ~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~---------~~g~~~~i~~D~vi~a~G~~pn~~~---l~~-~l~~~ 465 (521)
T 1hyu_A 399 KVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDR---------VSGDIHSVALAGIFVQIGLLPNTHW---LEG-ALERN 465 (521)
T ss_dssp HHTTCTTEEEECSEEEEEEEECSSSEEEEEEEET---------TTCCEEEEECSEEEECCCEEESCGG---GTT-TSCBC
T ss_pred HHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeC---------CCCceEEEEcCEEEECcCCCCCchH---Hhh-hhccC
Confidence 4543469999999999999887778877776431 1123468999999999996543211 111 1332
Q ss_pred ccccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHHcCCC
Q 039605 266 NTAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQP 324 (352)
Q Consensus 266 ~~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~l~~~ 324 (352)
..|+..+.++.++..|++|++||+.... ++ ....++.+|..||..|.++|.++
T Consensus 466 ~~G~I~Vd~~~~ts~p~VfA~GD~~~~~---~~---~~~~A~~~g~~aa~~i~~~L~~~ 518 (521)
T 1hyu_A 466 RMGEIIIDAKCETSVKGVFAAGDCTTVP---YK---QIIIATGEGAKASLSAFDYLIRT 518 (521)
T ss_dssp TTSCBCCCTTCBCSSTTEEECSTTBCCS---SC---CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEeCCCCCCCCCCEEEeecccCCC---cc---eeeehHHhHHHHHHHHHHHHHhh
Confidence 2466666678889999999999998532 12 24456889999999999998643
No 84
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.27 E-value=1.5e-10 Score=113.79 Aligned_cols=164 Identities=14% Similarity=0.103 Sum_probs=113.6
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
-.++|||+|..|+.+|..|++. |.+|+|||+.+.+... ...++...+.+
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~~------------------------------~~~~~~~~l~~ 232 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRL-GSKVTVVEFQPQIGAS------------------------------MDGEVAKATQK 232 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSSSS------------------------------SCHHHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHc-CCEEEEEEeCCccccc------------------------------cCHHHHHHHHH
Confidence 4799999999999999999999 9999999998754210 01344445555
Q ss_pred HHHcCCCcEEEccceeEEEEEe-CCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCcccccc
Q 039605 187 KLLARPNVKLFNAVAAEDLIVK-GNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDM 265 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~-~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~ 265 (352)
.+. +.|+++++++.+.++..+ +++...+.+.+. . +++..++.+|.||+|+|..+..... +....++..
T Consensus 233 ~l~-~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~------~---~g~~~~~~~D~vv~a~G~~p~~~~l-~l~~~g~~~ 301 (478)
T 1v59_A 233 FLK-KQGLDFKLSTKVISAKRNDDKNVVEIVVEDT------K---TNKQENLEAEVLLVAVGRRPYIAGL-GAEKIGLEV 301 (478)
T ss_dssp HHH-HTTCEEECSEEEEEEEEETTTTEEEEEEEET------T---TTEEEEEEESEEEECSCEEECCTTS-CTTTTTCCB
T ss_pred HHH-HCCCEEEeCCEEEEEEEecCCCeEEEEEEEc------C---CCCceEEECCEEEECCCCCcCCCCC-CchhcCcee
Confidence 554 569999999999999872 333334544310 0 1123679999999999976543210 112223333
Q ss_pred c-cccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHH
Q 039605 266 N-TAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 319 (352)
Q Consensus 266 ~-~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~ 319 (352)
+ .|.+.+.+++++..|++|++||+.... .....+..+|+.||..|..
T Consensus 302 ~~~G~i~vd~~~~t~~~~IyA~GD~~~~~-------~~~~~A~~~g~~aa~~i~~ 349 (478)
T 1v59_A 302 DKRGRLVIDDQFNSKFPHIKVVGDVTFGP-------MLAHKAEEEGIAAVEMLKT 349 (478)
T ss_dssp CTTSCBCCCTTSBCSSTTEEECGGGSSSC-------CCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEeECcCCccCCCCEEEeeccCCCc-------ccHHHHHHHHHHHHHHHcC
Confidence 3 566667788889999999999998531 1234567899999999986
No 85
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.27 E-value=8.3e-11 Score=115.00 Aligned_cols=162 Identities=17% Similarity=0.211 Sum_probs=113.0
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHH
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIM 185 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~ 185 (352)
.-+|+|||+|..|+.+|..|++. |.+|+|+|+.+.+... ...++...+.
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~~------------------------------~~~~~~~~l~ 218 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANF-GTKVTILEGAGEILSG------------------------------FEKQMAAIIK 218 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSSSTT------------------------------SCHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CCcEEEEEcCCccccc------------------------------cCHHHHHHHH
Confidence 35899999999999999999999 9999999998654210 0133444445
Q ss_pred HHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCcccccc
Q 039605 186 SKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDM 265 (352)
Q Consensus 186 ~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~ 265 (352)
+.+. +.|+++++++.+.++..+++++ .+.+.. + ++..++.+|.||+|+|..+.....+. ...++..
T Consensus 219 ~~l~-~~gv~i~~~~~v~~i~~~~~~~-~v~~~~--------~---g~~~~~~~D~vv~a~G~~p~~~~l~~-~~~g~~~ 284 (455)
T 1ebd_A 219 KRLK-KKGVEVVTNALAKGAEEREDGV-TVTYEA--------N---GETKTIDADYVLVTVGRRPNTDELGL-EQIGIKM 284 (455)
T ss_dssp HHHH-HTTCEEEESEEEEEEEEETTEE-EEEEEE--------T---TEEEEEEESEEEECSCEEESCSSSST-TTTTCCB
T ss_pred HHHH-HCCCEEEeCCEEEEEEEeCCeE-EEEEEe--------C---CceeEEEcCEEEECcCCCcccCcCCh-hhcCCcc
Confidence 5554 5699999999999998876654 233321 0 12367999999999997654322111 1222333
Q ss_pred c-cccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHH
Q 039605 266 N-TAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 319 (352)
Q Consensus 266 ~-~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~ 319 (352)
+ .+.+.+.+++++..|++|++||+... + .....+..+|+.||..|..
T Consensus 285 ~~~G~i~vd~~~~t~~~~Iya~GD~~~~----~---~~~~~A~~~g~~aa~~i~~ 332 (455)
T 1ebd_A 285 TNRGLIEVDQQCRTSVPNIFAIGDIVPG----P---ALAHKASYEGKVAAEAIAG 332 (455)
T ss_dssp CTTSCBCCCTTCBCSSTTEEECGGGSSS----C---CCHHHHHHHHHHHHHHHTS
T ss_pred CCCCCEeeCCCcccCCCCEEEEeccCCC----c---ccHHHHHHHHHHHHHHHcC
Confidence 3 46666678888999999999999752 1 1234557899999999874
No 86
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.27 E-value=6.5e-12 Score=121.31 Aligned_cols=164 Identities=14% Similarity=0.083 Sum_probs=114.5
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
-.|+|||+|..|+.+|..|++. |.+|+++|+.+.+.. .. ...++.+.+.+
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtvv~~~~~~l~-----------~~------------------~~~~~~~~l~~ 193 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARKL-GLSVTILEAGDELLV-----------RV------------------LGRRIGAWLRG 193 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSSH-----------HH------------------HCHHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCeEEEEecCCccch-----------hh------------------cCHHHHHHHHH
Confidence 4799999999999999999999 999999999864310 00 01233344444
Q ss_pred HHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCccccccc
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDMN 266 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~~ 266 (352)
.+. +.|+++++++.+.++..++ ++.++.+.++ .++.+|.||+|+|..+.... ....++..+
T Consensus 194 ~l~-~~GV~i~~~~~v~~i~~~~-~~~~v~~~dg--------------~~i~aD~Vv~a~G~~p~~~l---~~~~gl~~~ 254 (410)
T 3ef6_A 194 LLT-ELGVQVELGTGVVGFSGEG-QLEQVMASDG--------------RSFVADSALICVGAEPADQL---ARQAGLACD 254 (410)
T ss_dssp HHH-HHTCEEECSCCEEEEECSS-SCCEEEETTS--------------CEEECSEEEECSCEEECCHH---HHHTTCCBS
T ss_pred HHH-HCCCEEEeCCEEEEEeccC-cEEEEEECCC--------------CEEEcCEEEEeeCCeecHHH---HHhCCCccC
Confidence 444 5699999999999987644 5556766442 58999999999997654311 111223334
Q ss_pred cccceeecccccccCceeEecchhhhhc--CCCCCCcchhhhhhchHHHHHHHHHH
Q 039605 267 TAEDAIVKLTREIVPGMIVAGMEVAEID--GAPRMGPTFGAMMISGQKAAHLALKS 320 (352)
Q Consensus 267 ~g~~~vv~~~~~~~pg~~~aG~~~~~~~--g~~r~g~~~~~~~~sG~~aA~~i~~~ 320 (352)
.+ +.+.+++++..|++|++||+..... |.......+..+..+|+.||..|+..
T Consensus 255 ~g-i~vd~~~~t~~~~IyA~GD~a~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~ 309 (410)
T 3ef6_A 255 RG-VIVDHCGATLAKGVFAVGDVASWPLRAGGRRSLETYMNAQRQAAAVAAAILGK 309 (410)
T ss_dssp SS-EECCTTSBCSSTTEEECGGGEEEEBTTSSEECCCCHHHHHHHHHHHHHHHTTC
T ss_pred Ce-EEEccCeeECCCCEEEEEcceeccCCCCCeeeechHHHHHHHHHHHHHHHcCC
Confidence 33 4556778889999999999986532 22222334667788999999998753
No 87
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.26 E-value=2.7e-11 Score=118.26 Aligned_cols=163 Identities=20% Similarity=0.202 Sum_probs=113.3
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHH
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIM 185 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~ 185 (352)
..+++|||+|+.|+.+|..|++. |.+|+|+|+.+.+... . ...++.+.+.
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~~------------------~-----------~~~~~~~~l~ 198 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKA-GKKVTVIDILDRPLGV------------------Y-----------LDKEFTDVLT 198 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSTTTT------------------T-----------CCHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCeEEEEecCcccccc------------------c-----------CCHHHHHHHH
Confidence 46899999999999999999999 9999999998654210 0 0134445555
Q ss_pred HHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCcccccc
Q 039605 186 SKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDM 265 (352)
Q Consensus 186 ~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~ 265 (352)
+.+. +.|+++++++.+.++..+ +++..+.+. ..++.+|.||+|+|..+.... ..+. +..
T Consensus 199 ~~l~-~~gv~i~~~~~v~~i~~~-~~v~~v~~~---------------~~~i~~d~vi~a~G~~p~~~~--~~~~--~~~ 257 (447)
T 1nhp_A 199 EEME-ANNITIATGETVERYEGD-GRVQKVVTD---------------KNAYDADLVVVAVGVRPNTAW--LKGT--LEL 257 (447)
T ss_dssp HHHH-TTTEEEEESCCEEEEECS-SBCCEEEES---------------SCEEECSEEEECSCEEESCGG--GTTT--SCB
T ss_pred HHHH-hCCCEEEcCCEEEEEEcc-CcEEEEEEC---------------CCEEECCEEEECcCCCCChHH--HHhh--hhh
Confidence 5554 679999999999998765 444444442 147999999999997654321 1221 333
Q ss_pred -ccccceeecccccccCceeEecchhhhhc---CCCCCCcchhhhhhchHHHHHHHHH
Q 039605 266 -NTAEDAIVKLTREIVPGMIVAGMEVAEID---GAPRMGPTFGAMMISGQKAAHLALK 319 (352)
Q Consensus 266 -~~g~~~vv~~~~~~~pg~~~aG~~~~~~~---g~~r~g~~~~~~~~sG~~aA~~i~~ 319 (352)
..+.+.+.+++++..|++|++||+..... |.+.....+..+..+|+.||..|..
T Consensus 258 ~~~G~i~Vd~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 315 (447)
T 1nhp_A 258 HPNGLIKTDEYMRTSEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNLEE 315 (447)
T ss_dssp CTTSCBCCCTTCBCSSTTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHHHHHTSSS
T ss_pred cCCCcEEECccccCCCCCEEEeeeEEEeeccCCCCceechhHHHHHHHHHHHHHhhcC
Confidence 24556667888889999999999985321 2111123455668889999988764
No 88
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.26 E-value=3.4e-11 Score=117.72 Aligned_cols=159 Identities=11% Similarity=0.129 Sum_probs=111.6
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
-.++|||+|..|+.+|..|++. |.+|+|+|+.+.+... ...++.+.+.+
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~~------------------------------~~~~~~~~l~~ 216 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGL-GAKTHLFEMFDAPLPS------------------------------FDPMISETLVE 216 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSSTT------------------------------SCHHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhc-CCEEEEEEeCCchhhh------------------------------hhHHHHHHHHH
Confidence 4799999999999999999999 9999999998643210 01234444444
Q ss_pred HHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCccccccc
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDMN 266 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~~ 266 (352)
.+. +.|+++++++++.++..++++...+.+.+| .++.+|.||+|+|..+.....+ ....++..+
T Consensus 217 ~l~-~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g--------------~~i~~D~vv~a~G~~p~~~~l~-~~~~gl~~~ 280 (450)
T 1ges_A 217 VMN-AEGPQLHTNAIPKAVVKNTDGSLTLELEDG--------------RSETVDCLIWAIGREPANDNIN-LEAAGVKTN 280 (450)
T ss_dssp HHH-HHSCEEECSCCEEEEEECTTSCEEEEETTS--------------CEEEESEEEECSCEEESCTTSC-HHHHTCCBC
T ss_pred HHH-HCCCEEEeCCEEEEEEEeCCcEEEEEECCC--------------cEEEcCEEEECCCCCcCCCCCC-chhcCceEC
Confidence 454 569999999999999876543234555332 4799999999999754432100 111223333
Q ss_pred -cccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHH
Q 039605 267 -TAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 319 (352)
Q Consensus 267 -~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~ 319 (352)
.+.+.+.+++++..|++|++||+... + ..+..+..+|+.+|..++.
T Consensus 281 ~~g~i~vd~~~~t~~~~IyA~GD~~~~----~---~~~~~A~~~g~~aa~~i~~ 327 (450)
T 1ges_A 281 EKGYIVVDKYQNTNIEGIYAVGDNTGA----V---ELTPVAVAAGRRLSERLFN 327 (450)
T ss_dssp TTSCBCCCTTSBCSSTTEEECSGGGTS----C---CCHHHHHHHHHHHHHHHHT
T ss_pred CCCCEeECCCCccCCCCEEEEeccCCC----C---ccHHHHHHHHHHHHHHHcC
Confidence 46666678888999999999999742 1 2344567899999999875
No 89
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.26 E-value=3.5e-11 Score=113.64 Aligned_cols=118 Identities=19% Similarity=0.241 Sum_probs=80.6
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHH
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIM 185 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~ 185 (352)
.+||+|||||++|+++|+.|++. |++|+|||+.+..||.+...... ...++. ..+. .....++...+.
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~~~gg~~~~~~~~---------~~~~~~-~~~~-~~~~~~~~~~l~ 81 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMN-NISCRIIESMPQLGGQLAALYPE---------KHIYDV-AGFP-EVPAIDLVESLW 81 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCHHHHHTCTT---------SEECCS-TTCS-SEEHHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCCEEEEecCCCCCCcccccCCC---------cccccC-CCCC-CCCHHHHHHHHH
Confidence 68999999999999999999999 99999999998877632110000 000000 0110 012456666666
Q ss_pred HHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 186 SKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 186 ~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
+.+. +.+++++++++|+.+..+++..+.+.+.+ ..++.+|.||+|+|..+
T Consensus 82 ~~~~-~~~~~~~~~~~v~~i~~~~~~~~~v~~~~--------------g~~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 82 AQAE-RYNPDVVLNETVTKYTKLDDGTFETRTNT--------------GNVYRSRAVLIAAGLGA 131 (360)
T ss_dssp HHHH-TTCCEEECSCCEEEEEECTTSCEEEEETT--------------SCEEEEEEEEECCTTCS
T ss_pred HHHH-HhCCEEEcCCEEEEEEECCCceEEEEECC--------------CcEEEeeEEEEccCCCc
Confidence 6665 66899999999999988654222344432 25799999999999864
No 90
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.26 E-value=6.3e-11 Score=118.36 Aligned_cols=130 Identities=19% Similarity=0.265 Sum_probs=87.9
Q ss_pred CccEEEECCcHHHHHHHHHHhc---CCCCcEEEEeccCCCCCCcceeecchHHH-HHHHcCCccc---------------
Q 039605 106 DTDVVVVGAGSAGLSCAYEISK---NPNVQVAIIEQSVSPGGASGSVVRKPAHL-FLDELGIDYD--------------- 166 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~---~~G~kV~viEk~~~~GG~~~~~~~~~~~~-~l~~~Gi~~~--------------- 166 (352)
.+||||||||++|+++|+.|++ . |++|+|||+......+.+......... +++.+|+...
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~-G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lG~~~~~~~~~~~~~~~~g~~ 83 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQ-QANITLIESAAIPRIGVGEATIPSLQKVFFDFLGIPEREWMPQVNGAFKAAIK 83 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCS-SCEEEEEECSSSCCCCSCEECCTHHHHHTHHHHTCCHHHHGGGGTCEEECEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCC-CCEEEEECCCCCCCcCCCcccchhHHHHHHHHhCCCHHHHHHhcCchhhCCcc
Confidence 5799999999999999999999 8 999999999765443333333333333 4444443210
Q ss_pred ---cC-------------------------------------------------------------------CCeEEEec
Q 039605 167 ---EQ-------------------------------------------------------------------DNYVVIKH 176 (352)
Q Consensus 167 ---~~-------------------------------------------------------------------~~~~~~~~ 176 (352)
+. ..+....+
T Consensus 84 ~~~w~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~ 163 (538)
T 2aqj_A 84 FVNWRKSPDPSRDDHFYHLFGNVPNCDGVPLTHYWLRKREQGFQQPMEYACYPQPGALDGKLAPCLSDGTRQMSHAWHFD 163 (538)
T ss_dssp EESCSSSCCTTSCCEEEEESSCCCEETTEEHHHHHHHHHHTTCCSCHHHHHCSCHHHHHTTBCSBCTTCCBCSCCEEEEC
T ss_pred ccCcCcccccCCCCceECCCCccCccccCchhHHHHHhcccccccCccccccccccHhhhccchHhhcCCcCCCccEEEe
Confidence 00 00111223
Q ss_pred hHHHHHHHHHHHHcCCCcEEEccceeEEEEEeC-CEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCC
Q 039605 177 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-NRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPF 252 (352)
Q Consensus 177 ~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~-g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~ 252 (352)
...+...|.+.+.+ .|++++.+ +|+++..++ +.++++.+.+| .+++||.||+|+|.++..
T Consensus 164 ~~~l~~~L~~~a~~-~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g--------------~~i~ad~vV~A~G~~s~~ 224 (538)
T 2aqj_A 164 AHLVADFLKRWAVE-RGVNRVVD-EVVDVRLNNRGYISNLLTKEG--------------RTLEADLFIDCSGMRGLL 224 (538)
T ss_dssp HHHHHHHHHHHHHH-TTCEEEEC-CEEEEEECTTSCEEEEEETTS--------------CEECCSEEEECCGGGCCC
T ss_pred HHHHHHHHHHHHHH-CCCEEEEe-eEeEEEEcCCCcEEEEEECCC--------------cEEEeCEEEECCCCchhh
Confidence 34566677777764 69999999 899998864 45666766432 479999999999987754
No 91
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.26 E-value=7.7e-11 Score=115.23 Aligned_cols=158 Identities=15% Similarity=0.136 Sum_probs=111.7
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
-.++|||+|.+|+.+|..|++. |.+|+|+|+.+.+... ...++.+.+.+
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~-g~~V~lv~~~~~~l~~------------------------------~~~~~~~~l~~ 216 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRL-GAEVIVLEYMDRILPT------------------------------MDLEVSRAAER 216 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSCTT------------------------------SCHHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCEEEEEecCCccccc------------------------------cCHHHHHHHHH
Confidence 4799999999999999999999 9999999998643210 01334444455
Q ss_pred HHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCccccccc
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDMN 266 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~~ 266 (352)
.+. +.|+++++++++.++..+++.+ .+.+.+ ..++.+|.||+|+|..+.....+. ...++..+
T Consensus 217 ~l~-~~Gv~i~~~~~V~~i~~~~~~v-~v~~~~--------------g~~i~~D~vv~A~G~~p~~~~l~~-~~~g~~~~ 279 (455)
T 2yqu_A 217 VFK-KQGLTIRTGVRVTAVVPEAKGA-RVELEG--------------GEVLEADRVLVAVGRRPYTEGLSL-ENAGLSTD 279 (455)
T ss_dssp HHH-HHTCEEECSCCEEEEEEETTEE-EEEETT--------------SCEEEESEEEECSCEEECCTTCCG-GGGTCCCC
T ss_pred HHH-HCCCEEEECCEEEEEEEeCCEE-EEEECC--------------CeEEEcCEEEECcCCCcCCCCCCh-hhcCCccC
Confidence 554 4699999999999998876654 343322 257999999999997654432111 11223332
Q ss_pred -cccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHH
Q 039605 267 -TAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 319 (352)
Q Consensus 267 -~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~ 319 (352)
.+...+.+++++..|++|++||+... + .....+..+|+.+|..|..
T Consensus 280 ~~g~i~vd~~~~t~~~~iya~GD~~~~----~---~~~~~A~~~g~~aa~~i~~ 326 (455)
T 2yqu_A 280 ERGRIPVDEHLRTRVPHIYAIGDVVRG----P---MLAHKASEEGIAAVEHMVR 326 (455)
T ss_dssp TTSCCCCCTTSBCSSTTEEECGGGSSS----C---CCHHHHHHHHHHHHHHHHH
T ss_pred CCCcEeECCCcccCCCCEEEEecCCCC----c---cCHHHHHHhHHHHHHHHcC
Confidence 35556667788889999999999742 1 1234557899999999986
No 92
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.25 E-value=9e-11 Score=120.71 Aligned_cols=130 Identities=15% Similarity=0.175 Sum_probs=85.5
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCc-c---eeec------c------------hHHHHHHHc-
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGAS-G---SVVR------K------------PAHLFLDEL- 161 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~-~---~~~~------~------------~~~~~l~~~- 161 (352)
.++||||||||++|+++|+.|+++ |++|+||||+..+|++. . ..+. . ...+.++++
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~-G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~l~ 341 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRR-GAVVTLYCADAQPAQGASGNRQGALYPLLNGKNDALETFFTSAFTFARRQYDQLL 341 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTT-TCCEEEEESSSSTTCSGGGCSCEEECCCCCSSCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHHC-CCcEEEEeCCCccccccccccCCEEecCCCCCChHHHHHHHHHHHHHHHHHHHhh
Confidence 368999999999999999999999 99999999986655321 0 0000 0 011222221
Q ss_pred --CCccc--cCCC----------------------------------------------eE----EEechHHHHHHHHHH
Q 039605 162 --GIDYD--EQDN----------------------------------------------YV----VIKHAALFTSTIMSK 187 (352)
Q Consensus 162 --Gi~~~--~~~~----------------------------------------------~~----~~~~~~~~~~~L~~~ 187 (352)
++.+. ..+. +. ...+...+...|.+.
T Consensus 342 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~g~v~p~~l~~aL~~~ 421 (689)
T 3pvc_A 342 EQGIAFDHQWCGVSQLAFDDKSRGKIEKMLHTQWPVEFAEAMSREQLSELAGLDCAHDGIHYPAGGWLCPSDLTHALMML 421 (689)
T ss_dssp HTTCCCCEECCCEEEECCSHHHHHHHHHHTTSCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTCEEECHHHHHHHHHHH
T ss_pred hhccccccccCceEEeccCHHHHHHHHHHHhcCCChHHhhccCHHHHHHhcCCCcccceEEecCCeEECHHHHHHHHHHH
Confidence 11110 0000 00 012335666777777
Q ss_pred HHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCe-EEEeCEEEEccCCCCC
Q 039605 188 LLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPN-VMEAKVVVSSCGHDGP 251 (352)
Q Consensus 188 ~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~-~i~A~~VIlAtG~~~~ 251 (352)
+. +.|++++++++|++|..+++++ .|.+.++ . +++||.||+|+|.++.
T Consensus 422 a~-~~Gv~i~~~t~V~~l~~~~~~v-~V~t~~G--------------~~~i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 422 AQ-QNGMTCHYQHELQRLKRIDSQW-QLTFGQS--------------QAAKHHATVILATGHRLP 470 (689)
T ss_dssp HH-HTTCEEEESCCEEEEEECSSSE-EEEEC-C--------------CCCEEESEEEECCGGGTT
T ss_pred HH-hCCCEEEeCCeEeEEEEeCCeE-EEEeCCC--------------cEEEECCEEEECCCcchh
Confidence 76 4699999999999999987764 4555331 3 7999999999999865
No 93
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.25 E-value=7.7e-11 Score=118.94 Aligned_cols=138 Identities=26% Similarity=0.334 Sum_probs=91.2
Q ss_pred CccEEEECCcHHHHHHHHHHhcC-----CCCcEEEEeccCCCCCC--cceeecchHHHHH----HHcCCcccc-------
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKN-----PNVQVAIIEQSVSPGGA--SGSVVRKPAHLFL----DELGIDYDE------- 167 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~-----~G~kV~viEk~~~~GG~--~~~~~~~~~~~~l----~~~Gi~~~~------- 167 (352)
++||||||||++|+++|+.|++. +|++|+||||...+|+. ....+.....+.+ .+.+.++..
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~~~ 114 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRF 114 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechhhe
Confidence 68999999999999999999985 28999999999877653 2222332222211 122222110
Q ss_pred ----C----------C-----CeEEEechHHHHHHHHHHHHcCCCcEEEccceeEEEEEeC-CEEEEEEEcccceeccCC
Q 039605 168 ----Q----------D-----NYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-NRVGGIVTNWALVSMNHD 227 (352)
Q Consensus 168 ----~----------~-----~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~-g~v~gv~~~~g~~~~~~~ 227 (352)
. . ......+...+.+.|.+++.+ .|+++++++.++++..++ +++.+|.+.+..+ +
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~-~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~--~-- 189 (584)
T 2gmh_A 115 GILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEA-LGVEVYPGYAAAEILFHEDGSVKGIATNDVGI--Q-- 189 (584)
T ss_dssp EEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHH-TTCEEETTCCEEEEEECTTSSEEEEEECCEEE--C--
T ss_pred eeeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHH-cCCEEEcCCEEEEEEEcCCCCEEEEEeCCccc--c--
Confidence 0 0 001223445677888888774 599999999999999876 5788887742000 0
Q ss_pred CCCCCC-------CeEEEeCEEEEccCCCC
Q 039605 228 SQSCMD-------PNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 228 ~~~~g~-------~~~i~A~~VIlAtG~~~ 250 (352)
.+|+ ..+++||.||+|+|.++
T Consensus 190 --~~G~~~~~~~~g~~i~Ad~VV~AdG~~S 217 (584)
T 2gmh_A 190 --KDGAPKTTFERGLELHAKVTIFAEGCHG 217 (584)
T ss_dssp --TTSCEEEEEECCCEEECSEEEECCCTTC
T ss_pred --CCCCcccccCCceEEECCEEEEeeCCCc
Confidence 0111 25799999999999876
No 94
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=99.25 E-value=3.2e-11 Score=116.45 Aligned_cols=160 Identities=15% Similarity=0.124 Sum_probs=111.3
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
-.|+|||+|..|+.+|..|++. |.+|+++|+.+.+... ....++...+.+
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~~-----------------------------~~~~~~~~~l~~ 195 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTA-GVHVSLVETQPRLMSR-----------------------------AAPATLADFVAR 195 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSSSTT-----------------------------TSCHHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCEEEEEEeCCccccc-----------------------------ccCHHHHHHHHH
Confidence 4799999999999999999999 9999999998654210 001333344444
Q ss_pred HHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCccccccc
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDMN 266 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~~ 266 (352)
.+. +.|++++.++.+.++. ++ .+.+.+ ..++.+|.||+|+|..+.... ....++..+
T Consensus 196 ~l~-~~GV~i~~~~~v~~i~--~~---~v~~~~--------------g~~i~~D~vi~a~G~~p~~~l---~~~~gl~~~ 252 (408)
T 2gqw_A 196 YHA-AQGVDLRFERSVTGSV--DG---VVLLDD--------------GTRIAADMVVVGIGVLANDAL---ARAAGLACD 252 (408)
T ss_dssp HHH-HTTCEEEESCCEEEEE--TT---EEEETT--------------SCEEECSEEEECSCEEECCHH---HHHHTCCBS
T ss_pred HHH-HcCcEEEeCCEEEEEE--CC---EEEECC--------------CCEEEcCEEEECcCCCccHHH---HHhCCCCCC
Confidence 454 5799999999999987 34 445533 257999999999996543211 111223334
Q ss_pred cccceeecccccccCceeEecchhhhhc---CCCCCCcchhhhhhchHHHHHHHHHH
Q 039605 267 TAEDAIVKLTREIVPGMIVAGMEVAEID---GAPRMGPTFGAMMISGQKAAHLALKS 320 (352)
Q Consensus 267 ~g~~~vv~~~~~~~pg~~~aG~~~~~~~---g~~r~g~~~~~~~~sG~~aA~~i~~~ 320 (352)
.+ +.+.+++++..|++|++||+..... |.+...+.+..+..+|+.||..|...
T Consensus 253 ~g-i~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~ 308 (408)
T 2gqw_A 253 DG-IFVDAYGRTTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVDP 308 (408)
T ss_dssp SS-EECCTTCBCSSTTEEECGGGEEEEETTTTEEECCCCHHHHHHHHHHHHHHHHCT
T ss_pred CC-EEECCCCccCCCCEEEEEEEEEecCccCCceeeccHHHHHHHHHHHHHHHhcCC
Confidence 44 5566778889999999999986532 11111234556788999999999854
No 95
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.24 E-value=3e-11 Score=114.75 Aligned_cols=130 Identities=18% Similarity=0.196 Sum_probs=84.8
Q ss_pred CCCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcc---eeec--------ch-------HHH-------HH
Q 039605 104 HADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASG---SVVR--------KP-------AHL-------FL 158 (352)
Q Consensus 104 ~~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~---~~~~--------~~-------~~~-------~l 158 (352)
..++||+|||||++|+++|+.|+++ |++|+|||+....+|... ..+. .. ..+ .+
T Consensus 15 ~~~~dvvIIGgG~~Gl~~A~~La~~-G~~V~llE~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 93 (382)
T 1ryi_A 15 KRHYEAVVIGGGIIGSAIAYYLAKE-NKNTALFESGTMGGRTTSAAAGMLGAHAECEERDAFFDFAMHSQRLYKGLGEEL 93 (382)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSTTTTHHHHCCCBCCGGGSCSSCSHHHHHHHHHHHHTTTHHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhC-CCcEEEEeCCCCCcccchhcCceeccCccCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 3568999999999999999999999 999999999865543210 0000 00 000 00
Q ss_pred -HHcCCcccc--CCC--------------------------------------------eE----EEechHHHHHHHHHH
Q 039605 159 -DELGIDYDE--QDN--------------------------------------------YV----VIKHAALFTSTIMSK 187 (352)
Q Consensus 159 -~~~Gi~~~~--~~~--------------------------------------------~~----~~~~~~~~~~~L~~~ 187 (352)
+..++.+.. .+. +. ...+...+...|.+.
T Consensus 94 ~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 173 (382)
T 1ryi_A 94 YALSGVDIRQHNGGMFKLAFSEEDVLQLRQMDDLDSVSWYSKEEVLEKEPYASGDIFGASFIQDDVHVEPYFVCKAYVKA 173 (382)
T ss_dssp HHHHCCCCCCBCCCEEEEESSHHHHHHHHTTTTSTTEEEEEHHHHHHHCTTSCTTCCEEEEETTCCBCCHHHHHHHHHHH
T ss_pred HHhhCCCcCeeecceEEEEeCHHHHHHHHHHhhcCCeEEECHHHHHHhCCCCCcccceEEEeCCCeEEcHHHHHHHHHHH
Confidence 111322110 000 00 011234566777777
Q ss_pred HHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCC
Q 039605 188 LLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGP 251 (352)
Q Consensus 188 ~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~ 251 (352)
+. +.|++++++++|+++..+++++ ++.+.+ .+++||.||+|+|.++.
T Consensus 174 ~~-~~g~~i~~~~~v~~i~~~~~~~-~v~~~~---------------g~~~a~~vV~A~G~~s~ 220 (382)
T 1ryi_A 174 AK-MLGAEIFEHTPVLHVERDGEAL-FIKTPS---------------GDVWANHVVVASGVWSG 220 (382)
T ss_dssp HH-HTTCEEETTCCCCEEECSSSSE-EEEETT---------------EEEEEEEEEECCGGGTH
T ss_pred HH-HCCCEEEcCCcEEEEEEECCEE-EEEcCC---------------ceEEcCEEEECCChhHH
Confidence 76 4699999999999999877766 565532 27999999999998763
No 96
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.24 E-value=3.1e-11 Score=115.58 Aligned_cols=127 Identities=21% Similarity=0.335 Sum_probs=82.9
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCC--CCc---ceeec----c--------hH--------------
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPG--GAS---GSVVR----K--------PA-------------- 154 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~G--G~~---~~~~~----~--------~~-------------- 154 (352)
++||+|||||++|+++|+.|+++ |++|+||||....+ |.. ...+. . ..
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~-G~~V~vlE~~~~~~~~gas~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAER-GHRVLVLERHTFFNENGGTSGAERHWRLQYTQEDLFRLTLETLPLWRALESRCERR 82 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCTTCSSSSCCSSEEEECSCCSSHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCCCCCCCCCCcCeEEEeccCcchhhhHHHHHHHHHHHHHHHhCcc
Confidence 57999999999999999999999 99999999987654 321 10110 0 00
Q ss_pred -------------------------HHHHHHcCCcccc----------C----C-Ce-E------EEechHHHHHHHHHH
Q 039605 155 -------------------------HLFLDELGIDYDE----------Q----D-NY-V------VIKHAALFTSTIMSK 187 (352)
Q Consensus 155 -------------------------~~~l~~~Gi~~~~----------~----~-~~-~------~~~~~~~~~~~L~~~ 187 (352)
.+++...|+++.. . . .. . ...+...+...|.+.
T Consensus 83 ~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 162 (397)
T 2oln_A 83 LIHEIGSLWFGDTDVVTNEGQISGTAAMMDKLSVRYEWLKATDIERRFGFRGLPRDYEGFLQPDGGTIDVRGTLAALFTL 162 (397)
T ss_dssp CEECCCEEEEECSSCCBTTBCHHHHHHHHHHTTCCCEEEEHHHHHHHHCCCSCCTTCEEEEETTCEEEEHHHHHHHHHHH
T ss_pred HHHHCCcEEEcCCCccchhHHHHHHHHHHHHcCCCceecCHHHHHhhCcCccCCCceeEEEcCCCCEEcHHHHHHHHHHH
Confidence 1122223332210 0 0 00 0 012334566677776
Q ss_pred HHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 188 LLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 188 ~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
+. +.|++++++++|+++..+++++. +.+.+ .+++|+.||+|+|.++
T Consensus 163 a~-~~Gv~i~~~~~V~~i~~~~~~v~-v~t~~---------------g~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 163 AQ-AAGATLRAGETVTELVPDADGVS-VTTDR---------------GTYRAGKVVLACGPYT 208 (397)
T ss_dssp HH-HTTCEEEESCCEEEEEEETTEEE-EEESS---------------CEEEEEEEEECCGGGH
T ss_pred HH-HcCCEEECCCEEEEEEEcCCeEE-EEECC---------------CEEEcCEEEEcCCcCh
Confidence 66 46999999999999998877653 44321 3799999999999874
No 97
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.24 E-value=5e-11 Score=116.31 Aligned_cols=142 Identities=17% Similarity=0.109 Sum_probs=87.7
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCC--cEEEEeccCCCCCCcceeecc-----------------------------h
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNV--QVAIIEQSVSPGGASGSVVRK-----------------------------P 153 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~--kV~viEk~~~~GG~~~~~~~~-----------------------------~ 153 (352)
..+||+|||||++|+++|+.|++. |. +|+|||+.+.+||.+...... .
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~-G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~ 83 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAE-KAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSP 83 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT-TCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhc-CCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCc
Confidence 367999999999999999999999 99 999999998888764332100 0
Q ss_pred HH--------HHHHH-cCCccccCCCeEEEechHHHHHHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceec
Q 039605 154 AH--------LFLDE-LGIDYDEQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSM 224 (352)
Q Consensus 154 ~~--------~~l~~-~Gi~~~~~~~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~ 224 (352)
.. ..+.. .++++... .....+...+.+.+.+.+. +.+..++++++|+.+..+++.+ .|.+.+
T Consensus 84 ~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~-~~~~~i~~~t~V~~v~~~~~~~-~V~~~~----- 154 (447)
T 2gv8_A 84 LYRDLQTNTPIELMGYCDQSFKPQ--TLQFPHRHTIQEYQRIYAQ-PLLPFIKLATDVLDIEKKDGSW-VVTYKG----- 154 (447)
T ss_dssp CCTTCBCSSCHHHHSCTTCCCCTT--CCSSCBHHHHHHHHHHHHG-GGGGGEECSEEEEEEEEETTEE-EEEEEE-----
T ss_pred hhhhhccCCCHHHhccCCCCCCCC--CCCCCCHHHHHHHHHHHHH-HhhCeEEeCCEEEEEEeCCCeE-EEEEee-----
Confidence 00 00101 11111111 0111233455555554444 3467888999999998877654 344432
Q ss_pred cCCCCCCCC-CeEEEeCEEEEccCCCCCCCCCCCCCc
Q 039605 225 NHDSQSCMD-PNVMEAKVVVSSCGHDGPFGATGVRGM 260 (352)
Q Consensus 225 ~~~~~~~g~-~~~i~A~~VIlAtG~~~~~~~~g~~g~ 260 (352)
..+ |+ ..++.+|.||+|+|.++.+..+.++|.
T Consensus 155 -~~~---G~~~~~~~~d~VVvAtG~~s~p~~p~i~G~ 187 (447)
T 2gv8_A 155 -TKA---GSPISKDIFDAVSICNGHYEVPYIPNIKGL 187 (447)
T ss_dssp -SST---TCCEEEEEESEEEECCCSSSSBCBCCCBTH
T ss_pred -cCC---CCeeEEEEeCEEEECCCCCCCCCCCCCCCh
Confidence 001 12 237999999999999765545445553
No 98
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.24 E-value=6.9e-11 Score=117.17 Aligned_cols=63 Identities=13% Similarity=0.133 Sum_probs=48.2
Q ss_pred EechHHHHHHHHHHHHcCCCcEEEccceeEEEEEe-CCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCC
Q 039605 174 IKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPF 252 (352)
Q Consensus 174 ~~~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~-~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~ 252 (352)
..+...+...|.+.+.+ .|++++++ +|+++..+ ++.+.++.+.+| .+++||.||.|+|.++..
T Consensus 169 ~~~~~~l~~~L~~~a~~-~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g--------------~~~~ad~vV~A~G~~S~~ 232 (511)
T 2weu_A 169 HFDADEVARYLSEYAIA-RGVRHVVD-DVQHVGQDERGWISGVHTKQH--------------GEISGDLFVDCTGFRGLL 232 (511)
T ss_dssp EECHHHHHHHHHHHHHH-TTCEEEEC-CEEEEEECTTSCEEEEEESSS--------------CEEECSEEEECCGGGCCC
T ss_pred EEcHHHHHHHHHHHHHH-CCCEEEEC-eEeEEEEcCCCCEEEEEECCC--------------CEEEcCEEEECCCcchHH
Confidence 34556777888887764 79999999 99999885 455667766432 479999999999998754
No 99
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.24 E-value=5.8e-11 Score=116.01 Aligned_cols=163 Identities=12% Similarity=0.054 Sum_probs=115.5
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
-.++|||+|..|+.+|..|++. |.+|+++|+.+.+... ....++...+.+
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~~-----------------------------~~~~~~~~~l~~ 199 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSNQ-NYNVNLIDGHERVLYK-----------------------------YFDKEFTDILAK 199 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSSSTTTT-----------------------------TSCHHHHHHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHhc-CCEEEEEEcCCchhhh-----------------------------hhhhhHHHHHHH
Confidence 3799999999999999999999 9999999997643210 011334444555
Q ss_pred HHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCcccccc-
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDM- 265 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~- 265 (352)
.+. +.|+++++++++.++..+++++..+.. + ..++.+|.||+|+|..+.... .... +..
T Consensus 200 ~l~-~~Gv~i~~~~~v~~i~~~~~~v~~v~~-~--------------g~~i~~D~vv~a~G~~p~~~l---l~~~-l~~~ 259 (452)
T 2cdu_A 200 DYE-AHGVNLVLGSKVAAFEEVDDEIITKTL-D--------------GKEIKSDIAILCIGFRPNTEL---LKGK-VAML 259 (452)
T ss_dssp HHH-HTTCEEEESSCEEEEEEETTEEEEEET-T--------------SCEEEESEEEECCCEEECCGG---GTTT-SCBC
T ss_pred HHH-HCCCEEEcCCeeEEEEcCCCeEEEEEe-C--------------CCEEECCEEEECcCCCCCHHH---HHHh-hhcC
Confidence 554 579999999999999876777655543 2 257999999999997654322 1112 333
Q ss_pred ccccceeecccccccCceeEecchhhhhcC---CCCCCcchhhhhhchHHHHHHHHH
Q 039605 266 NTAEDAIVKLTREIVPGMIVAGMEVAEIDG---APRMGPTFGAMMISGQKAAHLALK 319 (352)
Q Consensus 266 ~~g~~~vv~~~~~~~pg~~~aG~~~~~~~g---~~r~g~~~~~~~~sG~~aA~~i~~ 319 (352)
..+.+.+.+++++..|++|++||+....+. .+.....+..+..+|+.||..|..
T Consensus 260 ~~G~i~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 316 (452)
T 2cdu_A 260 DNGAIITDEYMHSSNRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLNLTE 316 (452)
T ss_dssp TTSCBCCCTTSBCSSTTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHTSSS
T ss_pred CCCCEEECCCcCcCCCCEEEcceEEEeccccCCCeeecchHHHHHHHHHHHHHHhCC
Confidence 346667778888999999999999864321 111123455668899999988864
No 100
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.24 E-value=1.2e-10 Score=116.77 Aligned_cols=62 Identities=16% Similarity=0.224 Sum_probs=46.6
Q ss_pred chHHHHHHHHHHHHcCCCcEEEccceeEEEEEeC-CEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCC
Q 039605 176 HAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-NRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPF 252 (352)
Q Consensus 176 ~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~-g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~ 252 (352)
+...+...|.+.+.+.+|++++++ +|+++..++ +.+.++.+.+| .++.||.||+|+|.++..
T Consensus 192 ~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G--------------~~i~ad~vI~A~G~~S~~ 254 (550)
T 2e4g_A 192 DAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATG--------------RVFDADLFVDCSGFRGLL 254 (550)
T ss_dssp CHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTS--------------CEEECSEEEECCGGGCCC
T ss_pred cHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCC--------------CEEECCEEEECCCCchhh
Confidence 445566777777764349999999 999998854 56667776432 579999999999987754
No 101
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.23 E-value=1.2e-10 Score=114.25 Aligned_cols=158 Identities=13% Similarity=0.150 Sum_probs=111.1
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
-.++|||+|..|+.+|..|++. |.+|+|+|+.+.+... ...++...+.+
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~-G~~Vtlv~~~~~~l~~------------------------------~~~~~~~~l~~ 215 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSF-GSEVTVVALEDRLLFQ------------------------------FDPLLSATLAE 215 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSSTT------------------------------SCHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhc-CCEEEEEEcCCccccc------------------------------cCHHHHHHHHH
Confidence 4799999999999999999999 9999999998643210 01233344444
Q ss_pred HHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCe-EEEeCEEEEccCCCCCCCCCCCCCcccccc
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPN-VMEAKVVVSSCGHDGPFGATGVRGMKALDM 265 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~-~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~ 265 (352)
.+. +.|+++++++.+.++..++++ ..+.+.+| . ++.+|.||+|+|..+.....+. ...++..
T Consensus 216 ~l~-~~gv~i~~~~~v~~i~~~~~~-~~v~~~~G--------------~~~i~~D~vv~a~G~~p~~~~l~~-~~~g~~~ 278 (463)
T 2r9z_A 216 NMH-AQGIETHLEFAVAALERDAQG-TTLVAQDG--------------TRLEGFDSVIWAVGRAPNTRDLGL-EAAGIEV 278 (463)
T ss_dssp HHH-HTTCEEESSCCEEEEEEETTE-EEEEETTC--------------CEEEEESEEEECSCEEESCTTSCH-HHHTCCC
T ss_pred HHH-HCCCEEEeCCEEEEEEEeCCe-EEEEEeCC--------------cEEEEcCEEEECCCCCcCCCCCCc-hhcCCcc
Confidence 454 569999999999999887655 34555332 3 7999999999997644321110 1112333
Q ss_pred c-cccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHH
Q 039605 266 N-TAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 319 (352)
Q Consensus 266 ~-~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~ 319 (352)
+ .+.+.+.+++++..|++|++||+... + ..+..+..+|+.+|..|+.
T Consensus 279 ~~~G~i~vd~~~~t~~~~Iya~GD~~~~----~---~~~~~A~~~g~~aa~~i~g 326 (463)
T 2r9z_A 279 QSNGMVPTDAYQNTNVPGVYALGDITGR----D---QLTPVAIAAGRRLAERLFD 326 (463)
T ss_dssp CTTSCCCCCTTSBCSSTTEEECGGGGTS----C---CCHHHHHHHHHHHHHHHHS
T ss_pred CCCCCEeECCCCccCCCCEEEEeecCCC----c---ccHHHHHHHHHHHHHHHcC
Confidence 3 46666778888999999999999742 1 2344557889999998874
No 102
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=99.23 E-value=5.6e-11 Score=115.80 Aligned_cols=159 Identities=14% Similarity=0.118 Sum_probs=110.8
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
..++|||||..|+.+|..+++. |.+|+|+|+.+.+... + ..+..+.+.+
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~ll~~-------------------~-----------d~~~~~~~~~ 196 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYER-GLHPTLIHRSDKINKL-------------------M-----------DADMNQPILD 196 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSSCCSTT-------------------S-----------CGGGGHHHHH
T ss_pred cEEEEECCccchhhhHHHHHhc-CCcceeeeeecccccc-------------------c-----------cchhHHHHHH
Confidence 3799999999999999999999 9999999998754210 0 0122233344
Q ss_pred HHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCccccccc
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDMN 266 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~~ 266 (352)
.+. +.|++++.++++.++. ... +.+.+ ..++.+|.||+|+|..+... +....++..+
T Consensus 197 ~l~-~~gV~i~~~~~v~~~~--~~~---v~~~~--------------g~~~~~D~vl~a~G~~Pn~~---~~~~~gl~~~ 253 (437)
T 4eqs_A 197 ELD-KREIPYRLNEEINAIN--GNE---ITFKS--------------GKVEHYDMIIEGVGTHPNSK---FIESSNIKLD 253 (437)
T ss_dssp HHH-HTTCCEEESCCEEEEE--TTE---EEETT--------------SCEEECSEEEECCCEEESCG---GGTTSSCCCC
T ss_pred Hhh-ccceEEEeccEEEEec--CCe---eeecC--------------CeEEeeeeEEEEeceecCcH---HHHhhhhhhc
Confidence 443 5799999999888764 232 33433 26899999999999654322 2222334433
Q ss_pred -cccceeecccccccCceeEecchhhhhc---CCCCCCcchhhhhhchHHHHHHHHH
Q 039605 267 -TAEDAIVKLTREIVPGMIVAGMEVAEID---GAPRMGPTFGAMMISGQKAAHLALK 319 (352)
Q Consensus 267 -~g~~~vv~~~~~~~pg~~~aG~~~~~~~---g~~r~g~~~~~~~~sG~~aA~~i~~ 319 (352)
.|.+.+.++++++.|++|++||++...+ +.+...+.+..+..+|+.+|+.|.-
T Consensus 254 ~~G~I~vd~~~~Ts~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~g 310 (437)
T 4eqs_A 254 RKGFIPVNDKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIAG 310 (437)
T ss_dssp TTSCEECCTTCBCSSTTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHHS
T ss_pred cCCcEecCCCccCCCCCEEEEEEccCcccccCCccccchhHHHHHHHHHHHHHHHcC
Confidence 4566677889999999999999987543 2333345566667889999998873
No 103
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.22 E-value=6.5e-11 Score=118.38 Aligned_cols=132 Identities=17% Similarity=0.215 Sum_probs=86.5
Q ss_pred CccEEEECCcHHHHHHHHHHh-cCCCCcEEEEeccCCCCCCccee------ecchH--------HHHHHHcCCccccCCC
Q 039605 106 DTDVVVVGAGSAGLSCAYEIS-KNPNVQVAIIEQSVSPGGASGSV------VRKPA--------HLFLDELGIDYDEQDN 170 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la-~~~G~kV~viEk~~~~GG~~~~~------~~~~~--------~~~l~~~Gi~~~~~~~ 170 (352)
++||+|||||++|+.+|+.|+ +. |++|+|||+.+..||.+... ...+. .+....+++ ...
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~-G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~----~~~ 82 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHEL-GLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTW----KTT 82 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTT-CCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCC----SBS
T ss_pred CCCEEEECcCHHHHHHHHHHHHcC-CCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCC----ccc
Confidence 589999999999999999999 88 99999999998888753210 00000 111111221 111
Q ss_pred eEEEechHHHHHHHHHHHHcCCCc--EEEccceeEEEEEeCC-EEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccC
Q 039605 171 YVVIKHAALFTSTIMSKLLARPNV--KLFNAVAAEDLIVKGN-RVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCG 247 (352)
Q Consensus 171 ~~~~~~~~~~~~~L~~~~~~~~gv--~i~~~t~v~~l~~~~g-~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG 247 (352)
+ ....++...+.+.+. +.++ .++++++|+++..+++ ..+.|.+.+| .++.+|.||+|+|
T Consensus 83 ~---~~~~ei~~~l~~~~~-~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G--------------~~i~ad~lV~AtG 144 (540)
T 3gwf_A 83 Y---ITQPEILEYLEDVVD-RFDLRRHFKFGTEVTSALYLDDENLWEVTTDHG--------------EVYRAKYVVNAVG 144 (540)
T ss_dssp E---EEHHHHHHHHHHHHH-HTTCGGGEEESCCEEEEEEETTTTEEEEEETTS--------------CEEEEEEEEECCC
T ss_pred C---CCHHHHHHHHHHHHH-HcCCcceeEeccEEEEEEEeCCCCEEEEEEcCC--------------CEEEeCEEEECCc
Confidence 2 234455555444444 4577 7899999999998764 3334555432 4799999999999
Q ss_pred CCCCCCCCCCCCc
Q 039605 248 HDGPFGATGVRGM 260 (352)
Q Consensus 248 ~~~~~~~~g~~g~ 260 (352)
.++....+.++|.
T Consensus 145 ~~s~p~~p~ipG~ 157 (540)
T 3gwf_A 145 LLSAINFPNLPGL 157 (540)
T ss_dssp SCCSBCCCCCTTG
T ss_pred ccccCCCCCCCCc
Confidence 8665444445554
No 104
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.22 E-value=1.3e-10 Score=116.61 Aligned_cols=163 Identities=15% Similarity=0.166 Sum_probs=113.4
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
-.|+|||+|..|+.+|..|++. |.+|+++++.+..... ...++...+.+
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~~------------------------------~~~~~~~~l~~ 200 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHL-GIKTTLLELADQVMTP------------------------------VDREMAGFAHQ 200 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSSCTT------------------------------SCHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhc-CCcEEEEEcCCccchh------------------------------cCHHHHHHHHH
Confidence 3799999999999999999999 9999999998643210 01333444444
Q ss_pred HHHcCCCcEEEccceeEEEEEe-------------------CCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccC
Q 039605 187 KLLARPNVKLFNAVAAEDLIVK-------------------GNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCG 247 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~-------------------~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG 247 (352)
.+. +.|+++++++.+.++..+ ++++. +...+ ..++.+|.||+|+|
T Consensus 201 ~l~-~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~--------------g~~i~~D~vi~a~G 264 (565)
T 3ntd_A 201 AIR-DQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLS-LTLSN--------------GELLETDLLIMAIG 264 (565)
T ss_dssp HHH-HTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEE-EEETT--------------SCEEEESEEEECSC
T ss_pred HHH-HCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEE-EEEcC--------------CCEEEcCEEEECcC
Confidence 444 579999999999999873 44443 33322 24899999999999
Q ss_pred CCCCCCCCCCCCccccccc-cccceeecccccccCceeEecchhhhhc---CCCCCCcchhhhhhchHHHHHHHHH
Q 039605 248 HDGPFGATGVRGMKALDMN-TAEDAIVKLTREIVPGMIVAGMEVAEID---GAPRMGPTFGAMMISGQKAAHLALK 319 (352)
Q Consensus 248 ~~~~~~~~g~~g~~~~~~~-~g~~~vv~~~~~~~pg~~~aG~~~~~~~---g~~r~g~~~~~~~~sG~~aA~~i~~ 319 (352)
..+.... ....++..+ .+.+.+.+++++..|++|++||+....+ |.+...+.+..+..+|+.||..|+.
T Consensus 265 ~~p~~~l---~~~~g~~~~~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 337 (565)
T 3ntd_A 265 VRPETQL---ARDAGLAIGELGGIKVNAMMQTSDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRMAADNMFG 337 (565)
T ss_dssp EEECCHH---HHHHTCCBCTTSSBCCCTTCBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTT
T ss_pred CccchHH---HHhCCcccCCCCCEEECCCcccCCCCEEEeeeeEeeccccCCceeecccHHHHHHHHHHHHHHhcC
Confidence 7644321 111123322 3556666788899999999999985432 3222234566678899999999884
No 105
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.22 E-value=7.3e-11 Score=110.06 Aligned_cols=116 Identities=21% Similarity=0.267 Sum_probs=79.1
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHH
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIM 185 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~ 185 (352)
++||+|||||++|+++|+.|++. |++|+|||+.+..||.+...+.. ..+.....+.. ....++...+.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~~~~gg~~~~~~~~----------~~~~~~~~~~~-~~~~~~~~~l~ 72 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMR-GLSFRFVDPLPEPGGQLTALYPE----------KYIYDVAGFPK-VYAKDLVKGLV 72 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSSSCHHHHHTCTT----------SEECCSTTCSS-EEHHHHHHHHH
T ss_pred cCcEEEECCCHHHHHHHHHHHhC-CCCEEEEeCCCCCCCeeeccCCC----------ceeeccCCCCC-CCHHHHHHHHH
Confidence 58999999999999999999999 99999999998777632111000 00000001110 12355666666
Q ss_pred HHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCC
Q 039605 186 SKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHD 249 (352)
Q Consensus 186 ~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~ 249 (352)
+.+. +.+++++.+++|..+..+++.+ .+.+.+ ..++.+|.||+|+|..
T Consensus 73 ~~~~-~~~~~~~~~~~v~~i~~~~~~~-~v~~~~--------------g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 73 EQVA-PFNPVYSLGERAETLEREGDLF-KVTTSQ--------------GNAYTAKAVIIAAGVG 120 (335)
T ss_dssp HHHG-GGCCEEEESCCEEEEEEETTEE-EEEETT--------------SCEEEEEEEEECCTTS
T ss_pred HHHH-HcCCEEEeCCEEEEEEECCCEE-EEEECC--------------CCEEEeCEEEECCCCC
Confidence 6554 5689999999999998876643 243322 2579999999999985
No 106
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.21 E-value=2.1e-10 Score=113.45 Aligned_cols=158 Identities=16% Similarity=0.197 Sum_probs=113.0
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
-.++|||+|..|+..|..|++. |.+|+++|+.+.+... ...++...+.+
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~~l~~------------------------------~d~~~~~~l~~ 231 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTEL-GVPVTVVASQDHVLPY------------------------------EDADAALVLEE 231 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHT-TCCEEEECSSSSSSCC------------------------------SSHHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCeEEEEEcCCccccc------------------------------cCHHHHHHHHH
Confidence 4799999999999999999999 9999999998644210 12344445555
Q ss_pred HHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCccccccc
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDMN 266 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~~ 266 (352)
.+. +.|+++++++++.++..+++++ .+...+ ..++.+|.||+|+|..+.....+. ...++..+
T Consensus 232 ~l~-~~GV~i~~~~~V~~i~~~~~~v-~v~~~~--------------g~~i~aD~Vv~a~G~~p~~~~l~l-~~~gl~~~ 294 (499)
T 1xdi_A 232 SFA-ERGVRLFKNARAASVTRTGAGV-LVTMTD--------------GRTVEGSHALMTIGSVPNTSGLGL-ERVGIQLG 294 (499)
T ss_dssp HHH-HTTCEEETTCCEEEEEECSSSE-EEEETT--------------SCEEEESEEEECCCEEECCSSSCT-TTTTCCCB
T ss_pred HHH-HCCCEEEeCCEEEEEEEeCCEE-EEEECC--------------CcEEEcCEEEECCCCCcCCCcCCc-hhcCceEC
Confidence 554 5799999999999998776554 343322 257999999999997654422111 11223333
Q ss_pred -cccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHH
Q 039605 267 -TAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 319 (352)
Q Consensus 267 -~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~ 319 (352)
.|.+.+.+++++..|++|++||+.... .....+..+|+.||..|..
T Consensus 295 ~~G~i~Vd~~~~t~~~~IyA~GD~~~~~-------~l~~~A~~~g~~aa~~i~g 341 (499)
T 1xdi_A 295 RGNYLTVDRVSRTLATGIYAAGDCTGLL-------PLASVAAMQGRIAMYHALG 341 (499)
T ss_dssp TTTBCCCCSSSBCSSTTEEECSGGGTSC-------SCHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEECCCcccCCCCEEEEeccCCCc-------ccHHHHHHHHHHHHHHhcC
Confidence 366677788889999999999998521 1234557899999999874
No 107
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.21 E-value=2.5e-11 Score=117.44 Aligned_cols=38 Identities=32% Similarity=0.556 Sum_probs=35.8
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGA 145 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~ 145 (352)
+||||||||++|++||+.|+++ |++|+|||+.+.+||.
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~-G~~V~vlE~~~~~GG~ 39 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNA-GKKVLLLEGGERLGGR 39 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT-TCCEEEECSSSSSBTT
T ss_pred CCEEEECCcHHHHHHHHHHHHc-CCeEEEEecCCCccCe
Confidence 6999999999999999999999 9999999998888775
No 108
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.21 E-value=3.7e-11 Score=120.28 Aligned_cols=137 Identities=18% Similarity=0.207 Sum_probs=83.6
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcce------eecchHHHHHH--HcCC--ccccCCCeEEE
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGS------VVRKPAHLFLD--ELGI--DYDEQDNYVVI 174 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~------~~~~~~~~~l~--~~Gi--~~~~~~~~~~~ 174 (352)
.++||||||||++|+.+|++|++. |++|+|||+++.+||.+.. ....+...+.. .-.. .+.+...+
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~-g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~--- 83 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQA-GMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENF--- 83 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSS---
T ss_pred CCCCEEEECccHHHHHHHHHHHhC-CCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccC---
Confidence 468999999999999999999998 9999999999888886321 11111111100 0000 01111111
Q ss_pred echHHHHHHHHHHHHcCCCc--EEEccceeEEEEEeCC-EEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCC
Q 039605 175 KHAALFTSTIMSKLLARPNV--KLFNAVAAEDLIVKGN-RVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGP 251 (352)
Q Consensus 175 ~~~~~~~~~L~~~~~~~~gv--~i~~~t~v~~l~~~~g-~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~ 251 (352)
....++...+.+.+. +.++ .++++++|+++..+++ ..+.|.+.+ ..++.+|.||+|+|.++.
T Consensus 84 ~~~~ei~~yl~~~~~-~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~--------------G~~~~ad~lV~AtG~~s~ 148 (545)
T 3uox_A 84 ASQPEMLRYVNRAAD-AMDVRKHYRFNTRVTAARYVENDRLWEVTLDN--------------EEVVTCRFLISATGPLSA 148 (545)
T ss_dssp CBHHHHHHHHHHHHH-HHTCGGGEECSCCEEEEEEEGGGTEEEEEETT--------------TEEEEEEEEEECCCSCBC
T ss_pred CCHHHHHHHHHHHHH-HcCCcCcEEECCEEEEEEEeCCCCEEEEEECC--------------CCEEEeCEEEECcCCCCC
Confidence 123444444333332 3455 7888999999988653 334455543 258999999999997655
Q ss_pred CCCCCCCCc
Q 039605 252 FGATGVRGM 260 (352)
Q Consensus 252 ~~~~g~~g~ 260 (352)
...+.++|.
T Consensus 149 p~~p~ipG~ 157 (545)
T 3uox_A 149 SRMPDIKGI 157 (545)
T ss_dssp ---CCCTTG
T ss_pred CcCCCCCCc
Confidence 444455554
No 109
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.21 E-value=1.5e-10 Score=117.99 Aligned_cols=139 Identities=18% Similarity=0.242 Sum_probs=92.3
Q ss_pred CccEEEECCcHHHHHHHHHHhc-CCCCcEEEEeccCCCCCC-cceeecchHHHHHHHcCCccc--------------c--
Q 039605 106 DTDVVVVGAGSAGLSCAYEISK-NPNVQVAIIEQSVSPGGA-SGSVVRKPAHLFLDELGIDYD--------------E-- 167 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~-~~G~kV~viEk~~~~GG~-~~~~~~~~~~~~l~~~Gi~~~--------------~-- 167 (352)
++||+|||||++||++|+.|++ . |++|+||||.+..+.. ....+.....+.++.+|+.-. .
T Consensus 32 ~~dVlIVGaGpaGL~~A~~La~~~-G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~ 110 (639)
T 2dkh_A 32 QVDVLIVGCGPAGLTLAAQLAAFP-DIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPD 110 (639)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTCT-TSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEEC
T ss_pred CCcEEEECcCHHHHHHHHHHHHhC-CCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCC
Confidence 5799999999999999999999 9 9999999998765432 334455556666666664210 0
Q ss_pred ---CCC-----------------eEEEechHHHHHHHHHHHHcCC-CcEEEccceeEEEEEeCC---EEEEEEEccccee
Q 039605 168 ---QDN-----------------YVVIKHAALFTSTIMSKLLARP-NVKLFNAVAAEDLIVKGN---RVGGIVTNWALVS 223 (352)
Q Consensus 168 ---~~~-----------------~~~~~~~~~~~~~L~~~~~~~~-gv~i~~~t~v~~l~~~~g---~v~gv~~~~g~~~ 223 (352)
.+. .....+...+.+.|.+.+.+.. +++++++++++++..+++ ..+.+.+.+.
T Consensus 111 ~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~--- 187 (639)
T 2dkh_A 111 PGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERC--- 187 (639)
T ss_dssp TTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEEC---
T ss_pred CCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEec---
Confidence 000 1122344567777788777543 349999999999998752 2223444210
Q ss_pred ccCCCCCCCCCeEEEeCEEEEccCCCCC
Q 039605 224 MNHDSQSCMDPNVMEAKVVVSSCGHDGP 251 (352)
Q Consensus 224 ~~~~~~~~g~~~~i~A~~VIlAtG~~~~ 251 (352)
....+|+..+++||+||.|+|.++.
T Consensus 188 ---~~~~~G~~~~i~a~~vVgADG~~S~ 212 (639)
T 2dkh_A 188 ---DAAHAGQIETVQARYVVGCDGARSN 212 (639)
T ss_dssp ---SGGGTTCEEEEEEEEEEECCCTTCH
T ss_pred ---cccCCCCeEEEEeCEEEECCCcchH
Confidence 0000123468999999999999873
No 110
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.21 E-value=3.1e-10 Score=110.90 Aligned_cols=162 Identities=13% Similarity=0.096 Sum_probs=114.8
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
-.++|||+|..|+.+|..|++. |.+|+++++.+.+... ....++.+.+.+
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~~-----------------------------~~d~~~~~~l~~ 197 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKM-KKTVHVFESLENLLPK-----------------------------YFDKEMVAEVQK 197 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSSSTT-----------------------------TCCHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCeEEEEEccCccccc-----------------------------cCCHHHHHHHHH
Confidence 4799999999999999999999 9999999998643210 012344455555
Q ss_pred HHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCcccccc-
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDM- 265 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~- 265 (352)
.+. +.|+++++++.+.++..+++++ .+.+.+ .++.+|.||+|+|..+.... .... +..
T Consensus 198 ~l~-~~GV~i~~~~~v~~i~~~~~~v-~v~~~~---------------g~i~aD~Vv~A~G~~p~~~~---l~~~-~~~~ 256 (452)
T 3oc4_A 198 SLE-KQAVIFHFEETVLGIEETANGI-VLETSE---------------QEISCDSGIFALNLHPQLAY---LDKK-IQRN 256 (452)
T ss_dssp HHH-TTTEEEEETCCEEEEEECSSCE-EEEESS---------------CEEEESEEEECSCCBCCCSS---CCTT-SCBC
T ss_pred HHH-HcCCEEEeCCEEEEEEccCCeE-EEEECC---------------CEEEeCEEEECcCCCCChHH---HHhh-hccC
Confidence 554 6799999999999998777776 555522 27999999999997654322 1111 332
Q ss_pred ccccceeecccccccCceeEecchhhhhc---CCCCCCcchhhhhhchHHHHHHHHH
Q 039605 266 NTAEDAIVKLTREIVPGMIVAGMEVAEID---GAPRMGPTFGAMMISGQKAAHLALK 319 (352)
Q Consensus 266 ~~g~~~vv~~~~~~~pg~~~aG~~~~~~~---g~~r~g~~~~~~~~sG~~aA~~i~~ 319 (352)
..+.+.+.+++++..|++|++||+....+ |.....+.+..+..+|+.||..|+.
T Consensus 257 ~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g 313 (452)
T 3oc4_A 257 LDQTIAVDAYLQTSVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNLEE 313 (452)
T ss_dssp TTSCBCCCTTCBCSSTTEEECGGGBCEEEGGGTEEECCCCHHHHHHHHHHHTTSSSS
T ss_pred CCCCEEECcCccCCCCCEEEEEeeEEeccccCCceeecchHHHHHHHHHHHHHHhcC
Confidence 34566667888899999999999986432 1111223455668889999888764
No 111
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.21 E-value=3.2e-10 Score=112.26 Aligned_cols=166 Identities=9% Similarity=0.018 Sum_probs=112.9
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
-.++|||+|..|+.+|..|++. |.+|+++|+.+.+... ...++...+.+
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~~l~~------------------------------~d~~~~~~l~~ 225 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRL-GIDSYIFARGNRILRK------------------------------FDESVINVLEN 225 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTT-TCEEEEECSSSSSCTT------------------------------SCHHHHHHHHH
T ss_pred CeEEEECChHHHHHHHHHHHHc-CCeEEEEecCCccCcc------------------------------cchhhHHHHHH
Confidence 4799999999999999999999 9999999997654210 11334444555
Q ss_pred HHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeE-EEeCEEEEccCCCCCCCCCCCCCcccccc
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNV-MEAKVVVSSCGHDGPFGATGVRGMKALDM 265 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~-i~A~~VIlAtG~~~~~~~~g~~g~~~~~~ 265 (352)
.+. +.|+++++++.+.++..++++...+.+.+| .+ +.+|.||+|+|..+.....+ ....++..
T Consensus 226 ~l~-~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g--------------~~~~~~D~vi~a~G~~p~~~~l~-~~~~g~~~ 289 (500)
T 1onf_A 226 DMK-KNNINIVTFADVVEIKKVSDKNLSIHLSDG--------------RIYEHFDHVIYCVGRSPDTENLK-LEKLNVET 289 (500)
T ss_dssp HHH-HTTCEEECSCCEEEEEESSTTCEEEEETTS--------------CEEEEESEEEECCCBCCTTTTSS-CTTTTCCB
T ss_pred HHH-hCCCEEEECCEEEEEEEcCCceEEEEECCC--------------cEEEECCEEEECCCCCcCCCCCC-chhcCccc
Confidence 554 579999999999999876433224544332 34 99999999999765432111 12223334
Q ss_pred ccccceeecccccccCceeEecchhhhhc--------------------------C-CCCCCcchhhhhhchHHHHHHHH
Q 039605 266 NTAEDAIVKLTREIVPGMIVAGMEVAEID--------------------------G-APRMGPTFGAMMISGQKAAHLAL 318 (352)
Q Consensus 266 ~~g~~~vv~~~~~~~pg~~~aG~~~~~~~--------------------------g-~~r~g~~~~~~~~sG~~aA~~i~ 318 (352)
+.|.+.+.+++++..|++|++||+....+ + .......+..+..+|+.||..++
T Consensus 290 ~~G~i~vd~~~~t~~~~iya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~ 369 (500)
T 1onf_A 290 NNNYIVVDENQRTSVNNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLF 369 (500)
T ss_dssp SSSCEEECTTCBCSSSSEEECSTTEEEC------------------------------CBCCCCHHHHHHHHHHHHHHHH
T ss_pred cCCEEEECCCcccCCCCEEEEeccccccccccccccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHh
Confidence 55666777888899999999999983110 0 00111344566889999999987
Q ss_pred H
Q 039605 319 K 319 (352)
Q Consensus 319 ~ 319 (352)
.
T Consensus 370 g 370 (500)
T 1onf_A 370 L 370 (500)
T ss_dssp S
T ss_pred C
Confidence 4
No 112
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.20 E-value=1.6e-10 Score=114.38 Aligned_cols=134 Identities=14% Similarity=0.104 Sum_probs=86.0
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcce---eec----c----------hHHH-H--H-HH----
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGS---VVR----K----------PAHL-F--L-DE---- 160 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~---~~~----~----------~~~~-~--l-~~---- 160 (352)
++||+|||||++|+++|+.|+++ |++|+||||.+..+|++.. .+. . ...+ + + +.
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~-G~~V~llE~~~~~~gtS~~s~gli~~g~~~~~~~~~~l~~~~~~~~~~l~~~~~~l 81 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGR-GLSVLMLEAQDLACATSSASSKLIHGGLRYLEHYEFRLVSEALAEREVLLKMAPHI 81 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSTTCSGGGSSCCEECCCGGGGGGTCHHHHHHHHHHHHHHHHHCTTT
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-CCCEEEEECCCCCCCccccccccccccchhhhhchHHHHHHHHHHHHHHHHhCCcc
Confidence 68999999999999999999999 9999999998755443211 000 0 0000 0 0 00
Q ss_pred -----------------------------c-CCcccc----------C---CC----eE---EEechHHHHHHHHHHHHc
Q 039605 161 -----------------------------L-GIDYDE----------Q---DN----YV---VIKHAALFTSTIMSKLLA 190 (352)
Q Consensus 161 -----------------------------~-Gi~~~~----------~---~~----~~---~~~~~~~~~~~L~~~~~~ 190 (352)
+ +..+-. . .. +. ...+...+...+.+.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~P~l~~~~~~~~~~~~g~v~~~~l~~~l~~~a~- 160 (501)
T 2qcu_A 82 AFPMRFRLPHRPHLRPAWMIRIGLFMYDHLGKRTSLPGSTGLRFGANSVLKPEIKRGFEYSDCWVDDARLVLANAQMVV- 160 (501)
T ss_dssp EEEEEEEEECCTTTSCHHHHHHHHHHHHSSSCCSSSCCCEEEECCTTSSBCTTCCEEEEEEEEEECHHHHHHHHHHHHH-
T ss_pred ccccCeEeccCcccchHHHHHHHHHHHHhcCCcEEECHHHHHHhhcCCCcchhceEEEEeeCCEEcHHHHHHHHHHHHH-
Confidence 0 000000 0 00 00 11245567777777776
Q ss_pred CCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCC
Q 039605 191 RPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGP 251 (352)
Q Consensus 191 ~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~ 251 (352)
+.|++++++++|+++..++ +++++.+.+. .+ |+..+++||.||+|+|.|+.
T Consensus 161 ~~Gv~i~~~~~V~~l~~~~-~~~~V~~~d~------~~---G~~~~i~A~~VV~AtG~~s~ 211 (501)
T 2qcu_A 161 RKGGEVLTRTRATSARREN-GLWIVEAEDI------DT---GKKYSWQARGLVNATGPWVK 211 (501)
T ss_dssp HTTCEEECSEEEEEEEEET-TEEEEEEEET------TT---CCEEEEEESCEEECCGGGHH
T ss_pred HcCCEEEcCcEEEEEEEeC-CEEEEEEEEC------CC---CCEEEEECCEEEECCChhHH
Confidence 4699999999999999876 5667776320 11 13358999999999998863
No 113
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.20 E-value=1.2e-10 Score=114.65 Aligned_cols=163 Identities=12% Similarity=0.051 Sum_probs=112.7
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHH
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIM 185 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~ 185 (352)
.-.++|||||..|+.+|..|++. |.+|+|||+.+.+... ...++...+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~-G~~Vtlv~~~~~~l~~------------------------------~~~~~~~~l~ 233 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTL-GSRLDVVEMMDGLMQG------------------------------ADRDLVKVWQ 233 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHH-TCEEEEECSSSSSSTT------------------------------SCHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CCeEEEEEECCccccc------------------------------cCHHHHHHHH
Confidence 34799999999999999999999 9999999998654210 1134444444
Q ss_pred HHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCcccccc
Q 039605 186 SKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDM 265 (352)
Q Consensus 186 ~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~ 265 (352)
+.+. +.|+++++++.+.++..+++.+ .+.+.+ .. ++..++.+|.||+|+|..+.....+. ...++..
T Consensus 234 ~~l~-~~gV~i~~~~~v~~i~~~~~~~-~v~~~~------~~----~~g~~~~~D~vv~a~G~~p~~~~l~~-~~~gl~~ 300 (482)
T 1ojt_A 234 KQNE-YRFDNIMVNTKTVAVEPKEDGV-YVTFEG------AN----APKEPQRYDAVLVAAGRAPNGKLISA-EKAGVAV 300 (482)
T ss_dssp HHHG-GGEEEEECSCEEEEEEEETTEE-EEEEES------SS----CCSSCEEESCEEECCCEEECGGGTTG-GGTTCCC
T ss_pred HHHH-hcCCEEEECCEEEEEEEcCCeE-EEEEec------cC----CCceEEEcCEEEECcCCCcCCCCCCh-hhcCcee
Confidence 5554 6799999999999998776543 344422 00 01246889999999997644321111 1122333
Q ss_pred c-cccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHH
Q 039605 266 N-TAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 319 (352)
Q Consensus 266 ~-~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~ 319 (352)
+ .+.+.+.+++++..|++|++||+... + .....+..+|+.||..|..
T Consensus 301 ~~~G~i~vd~~~~t~~~~IyA~GD~~~~----~---~l~~~A~~~g~~aa~~i~g 348 (482)
T 1ojt_A 301 TDRGFIEVDKQMRTNVPHIYAIGDIVGQ----P---MLAHKAVHEGHVAAENCAG 348 (482)
T ss_dssp CTTSCCCCCTTSBCSSTTEEECGGGTCS----S---CCHHHHHHHHHHHHHHHTT
T ss_pred CCCCCEeeCCCcccCCCCEEEEEcccCC----C---ccHHHHHHHHHHHHHHHcC
Confidence 3 36667778889999999999999852 1 2334567899999999874
No 114
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.19 E-value=2e-10 Score=113.08 Aligned_cols=159 Identities=14% Similarity=0.157 Sum_probs=111.5
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
-.++|||+|..|+.+|..|++. |.+|+++|+.+.+... ...++.+.+.+
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~~l~~------------------------------~d~~~~~~l~~ 234 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGL-GSETHLVIRGETVLRK------------------------------FDECIQNTITD 234 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHT-TCEEEEECSSSSSCTT------------------------------SCHHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCceEEEEeCCccccc------------------------------cCHHHHHHHHH
Confidence 4799999999999999999999 9999999998643210 11334444455
Q ss_pred HHHcCCCcEEEccceeEEEEEeCCE-EEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCcccccc
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKGNR-VGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDM 265 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~g~-v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~ 265 (352)
.+. +.|+++++++.+.++..+++. +..+.+.+| + .++.+|.||+|+|..+.... + ....++..
T Consensus 235 ~l~-~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G------------~-~~i~~D~vv~a~G~~p~~~l-~-l~~~gl~~ 298 (479)
T 2hqm_A 235 HYV-KEGINVHKLSKIVKVEKNVETDKLKIHMNDS------------K-SIDDVDELIWTIGRKSHLGM-G-SENVGIKL 298 (479)
T ss_dssp HHH-HHTCEEECSCCEEEEEECC-CCCEEEEETTS------------C-EEEEESEEEECSCEEECCCS-S-GGGGTCCB
T ss_pred HHH-hCCeEEEeCCEEEEEEEcCCCcEEEEEECCC------------c-EEEEcCEEEECCCCCCcccc-C-hhhcCceE
Confidence 554 569999999999999875433 344555321 1 57999999999996544311 0 12223433
Q ss_pred c-cccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHH
Q 039605 266 N-TAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 319 (352)
Q Consensus 266 ~-~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~ 319 (352)
+ .+.+.+.+++++..|++|++||+... + ..+..+..+|+.||..++.
T Consensus 299 ~~~G~i~vd~~~~t~~~~IyA~GD~~~~----~---~~~~~A~~~g~~aa~~i~~ 346 (479)
T 2hqm_A 299 NSHDQIIADEYQNTNVPNIYSLGDVVGK----V---ELTPVAIAAGRKLSNRLFG 346 (479)
T ss_dssp CTTSCBCCCTTCBCSSTTEEECGGGTTS----S---CCHHHHHHHHHHHHHHHHS
T ss_pred CCCCCEeECCCCccCCCCEEEEEecCCC----c---ccHHHHHHHHHHHHHHhcC
Confidence 3 45666677888999999999999632 1 2344567899999999874
No 115
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.19 E-value=1.5e-10 Score=114.13 Aligned_cols=54 Identities=7% Similarity=0.068 Sum_probs=43.0
Q ss_pred HHHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCC
Q 039605 181 TSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHD 249 (352)
Q Consensus 181 ~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~ 249 (352)
.+.|.+.+. +.|++|+++++|++|..+++++++|++.+| +++.||.||.+++..
T Consensus 224 ~~aL~~~~~-~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g--------------~~~~ad~VV~~a~~~ 277 (501)
T 4dgk_A 224 VQGMIKLFQ-DLGGEVVLNARVSHMETTGNKIEAVHLEDG--------------RRFLTQAVASNADVV 277 (501)
T ss_dssp HHHHHHHHH-HTTCEEECSCCEEEEEEETTEEEEEEETTS--------------CEEECSCEEECCC--
T ss_pred HHHHHHHHH-HhCCceeeecceeEEEeeCCeEEEEEecCC--------------cEEEcCEEEECCCHH
Confidence 344445454 569999999999999999999999998653 689999999988754
No 116
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.19 E-value=1.7e-10 Score=113.00 Aligned_cols=161 Identities=16% Similarity=0.175 Sum_probs=111.9
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
-.++|||+|..|+.+|..|++. |.+|+|+|+.+.+... ...++...+.+
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~~------------------------------~~~~~~~~l~~ 220 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNY-GVDVTIVEFLPRALPN------------------------------EDADVSKEIEK 220 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSSTT------------------------------SCHHHHHHHHH
T ss_pred CeEEEECCcHHHHHHHHHHHHc-CCeEEEEEcCCccccc------------------------------cCHHHHHHHHH
Confidence 4799999999999999999999 9999999998643210 01233344444
Q ss_pred HHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCccccccc
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDMN 266 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~~ 266 (352)
.+. +.|+++++++.+.++..+++++ .+.+.. +|+..++.+|.||+|+|..+.....+. ...++..+
T Consensus 221 ~l~-~~gv~i~~~~~v~~i~~~~~~~-~v~~~~-----------~g~~~~~~~D~vv~a~G~~p~~~~l~~-~~~gl~~~ 286 (464)
T 2a8x_A 221 QFK-KLGVTILTATKVESIADGGSQV-TVTVTK-----------DGVAQELKAEKVLQAIGFAPNVEGYGL-DKAGVALT 286 (464)
T ss_dssp HHH-HHTCEEECSCEEEEEEECSSCE-EEEEES-----------SSCEEEEEESEEEECSCEEECCSSSCH-HHHTCCBC
T ss_pred HHH-HcCCEEEeCcEEEEEEEcCCeE-EEEEEc-----------CCceEEEEcCEEEECCCCCccCCCCCc-hhcCCccC
Confidence 444 5699999999999998766544 233321 112367999999999997644322111 11123333
Q ss_pred -cccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHH
Q 039605 267 -TAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 319 (352)
Q Consensus 267 -~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~ 319 (352)
.|.+.+.+++++..|++|++||+... + .....+..+|+.||..|..
T Consensus 287 ~~G~i~vd~~~~t~~~~IyA~GD~~~~----~---~~~~~A~~~g~~aa~~i~g 333 (464)
T 2a8x_A 287 DRKAIGVDDYMRTNVGHIYAIGDVNGL----L---QLAHVAEAQGVVAAETIAG 333 (464)
T ss_dssp TTSSBCCCTTSBCSSTTEEECGGGGCS----S---CSHHHHHHHHHHHHHHHHT
T ss_pred CCCCEeECcCCccCCCCEEEeECcCCC----c---cCHHHHHHHHHHHHHHhcC
Confidence 46667778888999999999999852 1 1234567899999999984
No 117
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.19 E-value=5.5e-11 Score=115.42 Aligned_cols=126 Identities=12% Similarity=0.074 Sum_probs=78.8
Q ss_pred HHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCccc
Q 039605 183 TIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKA 262 (352)
Q Consensus 183 ~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~ 262 (352)
.+.+.+ ++.||++++++.++++.. +. +.+.+. +++..++.+|.||+|+|..++...... + .+
T Consensus 205 ~l~~~l-~~~GV~i~~~~~v~~v~~--~~---v~~~~~----------~~~g~~i~~D~vv~a~G~~~~~~l~~~-~-~g 266 (430)
T 3h28_A 205 LVEDLF-AERNIDWIANVAVKAIEP--DK---VIYEDL----------NGNTHEVPAKFTMFMPSFQGPEVVASA-G-DK 266 (430)
T ss_dssp HHHHHH-HHTTCEEECSCEEEEECS--SE---EEEECT----------TSCEEEEECSEEEEECEEECCHHHHTT-C-TT
T ss_pred HHHHHH-HHCCCEEEeCCEEEEEeC--Ce---EEEEec----------CCCceEEeeeEEEECCCCccchhHhhc-c-cc
Confidence 333344 467999999999998853 32 233220 012468999999999996543221111 0 12
Q ss_pred cccccc-cceeeccccc-ccCceeEecchhhhhc--CCC-CC-C-cchhhhhhchHHHHHHHHHHcCCCCC
Q 039605 263 LDMNTA-EDAIVKLTRE-IVPGMIVAGMEVAEID--GAP-RM-G-PTFGAMMISGQKAAHLALKSLGQPNA 326 (352)
Q Consensus 263 ~~~~~g-~~~vv~~~~~-~~pg~~~aG~~~~~~~--g~~-r~-g-~~~~~~~~sG~~aA~~i~~~l~~~~~ 326 (352)
+....| ...+.+++++ ..|++|++||+..... +.+ .+ . .+...+..+|+.+|+.|.++|.+...
T Consensus 267 l~~~~G~~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g~~~ 337 (430)
T 3h28_A 267 VANPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNPD 337 (430)
T ss_dssp TBCTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CcCCCCCEEecCccccCCCCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 223346 5666677777 7999999999986432 100 00 1 12335578899999999999987654
No 118
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.19 E-value=1.9e-10 Score=113.09 Aligned_cols=165 Identities=14% Similarity=0.112 Sum_probs=112.6
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
-.++|||+|..|+.+|..|++. |.+|+|+|+.+.+... ....++...+.+
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~~-----------------------------~~~~~~~~~l~~ 228 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRL-GADVTAVEFLGHVGGV-----------------------------GIDMEISKNFQR 228 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSSCS-----------------------------SCCHHHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHc-CCEEEEEeccCccCCc-----------------------------ccCHHHHHHHHH
Confidence 4799999999999999999999 9999999998653210 011334444555
Q ss_pred HHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCccccccc
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDMN 266 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~~ 266 (352)
.+. +.|+++++++.+.++..++++...+.+.+ .. +++..++.+|.||+|+|..+.....+. ...++..+
T Consensus 229 ~l~-~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~------~~---~~~~~~i~~D~vv~a~G~~p~~~~l~l-~~~g~~~~ 297 (474)
T 1zmd_A 229 ILQ-KQGFKFKLNTKVTGATKKSDGKIDVSIEA------AS---GGKAEVITCDVLLVCIGRRPFTKNLGL-EELGIELD 297 (474)
T ss_dssp HHH-HTTCEEECSEEEEEEEECTTSCEEEEEEE------TT---SCCCEEEEESEEEECSCEEECCTTSSH-HHHTCCCC
T ss_pred HHH-HCCCEEEeCceEEEEEEcCCceEEEEEEe------cC---CCCceEEEcCEEEECcCCCcCCCcCCc-hhcCCccC
Confidence 554 57999999999999987765412333311 00 012468999999999997654322111 11123333
Q ss_pred -cccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHH
Q 039605 267 -TAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 319 (352)
Q Consensus 267 -~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~ 319 (352)
.+.+.+.+++++..|++|++||+... + .....+..+|+.||..|..
T Consensus 298 ~~G~i~vd~~~~t~~~~IyA~GD~~~~----~---~~~~~A~~~g~~aa~~i~~ 344 (474)
T 1zmd_A 298 PRGRIPVNTRFQTKIPNIYAIGDVVAG----P---MLAHKAEDEGIICVEGMAG 344 (474)
T ss_dssp TTSCCCCCTTCBCSSTTEEECGGGSSS----C---CCHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEECcCCccCCCCEEEeeecCCC----C---ccHHHHHHHHHHHHHHhcC
Confidence 46666778888999999999999752 1 2334567899999999975
No 119
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.18 E-value=1.7e-10 Score=113.97 Aligned_cols=162 Identities=19% Similarity=0.180 Sum_probs=113.3
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
-.|+|||+|..|+.+|..|++. |.+|+|+|+.+.+... . ...++.+.+.+
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~~l~~------------------~-----------~~~~~~~~l~~ 244 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRK-GKEVVLIDVVDTCLAG------------------Y-----------YDRDLTDLMAK 244 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSTTTT------------------T-----------SCHHHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHC-CCeEEEEEcccchhhh------------------H-----------HHHHHHHHHHH
Confidence 4799999999999999999999 9999999998643210 0 01344444555
Q ss_pred HHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCcccccc-
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDM- 265 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~- 265 (352)
.+. +.|+++++++.+.++.. ++++..+.+ + ..++.+|.||+|+|..+.... .... +..
T Consensus 245 ~l~-~~GV~i~~~~~v~~i~~-~~~v~~v~~-~--------------g~~i~~D~Vi~a~G~~p~~~l---l~~~-l~~~ 303 (490)
T 2bc0_A 245 NME-EHGIQLAFGETVKEVAG-NGKVEKIIT-D--------------KNEYDVDMVILAVGFRPNTTL---GNGK-IDLF 303 (490)
T ss_dssp HHH-TTTCEEEETCCEEEEEC-SSSCCEEEE-S--------------SCEEECSEEEECCCEEECCGG---GTTC-SCBC
T ss_pred HHH-hCCeEEEeCCEEEEEEc-CCcEEEEEE-C--------------CcEEECCEEEECCCCCcChHH---HHhh-hccC
Confidence 554 67999999999999875 444444444 2 257999999999997544322 1111 333
Q ss_pred ccccceeecccccccCceeEecchhhhhcC---CCCCCcchhhhhhchHHHHHHHHH
Q 039605 266 NTAEDAIVKLTREIVPGMIVAGMEVAEIDG---APRMGPTFGAMMISGQKAAHLALK 319 (352)
Q Consensus 266 ~~g~~~vv~~~~~~~pg~~~aG~~~~~~~g---~~r~g~~~~~~~~sG~~aA~~i~~ 319 (352)
+.+.+.+.+++++..|++|++||+....+. .+...+.+..+..+|+.||..|..
T Consensus 304 ~~G~I~Vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 360 (490)
T 2bc0_A 304 RNGAFLVNKRQETSIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNACG 360 (490)
T ss_dssp TTSCBCCCTTCBCSSTTEEECGGGBCEEETTTTEEECCCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEECCCcccCCCCEEEeeeeEEeccccCCceeecccHHHHHHHHHHHHHHhcC
Confidence 346566778888999999999999864321 111123455668899999999974
No 120
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.18 E-value=5.3e-10 Score=109.93 Aligned_cols=165 Identities=12% Similarity=0.118 Sum_probs=112.5
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
-.++|||+|..|+.+|..|++. |.+|+++++.+.+.. ....++.+.+.+
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~------------------------------~~d~~~~~~~~~ 236 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSAL-GSKTSLMIRHDKVLR------------------------------SFDSMISTNCTE 236 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSCT------------------------------TSCHHHHHHHHH
T ss_pred ccEEEECCCHHHHHHHHHHHHc-CCeEEEEEeCCcccc------------------------------ccCHHHHHHHHH
Confidence 4799999999999999999999 999999999764321 011334444444
Q ss_pred HHHcCCCcEEEccceeEEEEEeCCE-EEEEEEcccceeccCCCCCCCCC--eEEEeCEEEEccCCCCCCCCCCCCCcccc
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKGNR-VGGIVTNWALVSMNHDSQSCMDP--NVMEAKVVVSSCGHDGPFGATGVRGMKAL 263 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~g~-v~gv~~~~g~~~~~~~~~~~g~~--~~i~A~~VIlAtG~~~~~~~~g~~g~~~~ 263 (352)
.+. +.|++++.++.+.++..+++. ...+.+.+. .+ ++. .++.+|.||+|+|..+.....+ ....++
T Consensus 237 ~l~-~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~------~~---g~~~g~~~~~D~vi~a~G~~p~~~~l~-l~~~g~ 305 (478)
T 3dk9_A 237 ELE-NAGVEVLKFSQVKEVKKTLSGLEVSMVTAVP------GR---LPVMTMIPDVDCLLWAIGRVPNTKDLS-LNKLGI 305 (478)
T ss_dssp HHH-HTTCEEETTEEEEEEEECSSSEEEEEEECCT------TS---CCEEEEEEEESEEEECSCEEESCTTSC-GGGGTC
T ss_pred HHH-HCCCEEEeCCEEEEEEEcCCCcEEEEEEccC------CC---CcccceEEEcCEEEEeeccccCCCCCC-chhcCC
Confidence 454 579999999999999876443 233444321 00 111 6799999999999654332111 111223
Q ss_pred cc-ccccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHH
Q 039605 264 DM-NTAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKS 320 (352)
Q Consensus 264 ~~-~~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~ 320 (352)
.. ..+.+.+.+++++..|++|++||+... +.. ...+..+|+.||..|+..
T Consensus 306 ~~~~~G~i~vd~~~~t~~~~IyA~GD~~~~----~~~---~~~A~~~g~~aa~~i~~~ 356 (478)
T 3dk9_A 306 QTDDKGHIIVDEFQNTNVKGIYAVGDVCGK----ALL---TPVAIAAGRKLAHRLFEY 356 (478)
T ss_dssp CBCTTCCBCCCTTCBCSSTTEEECGGGGCS----SCC---HHHHHHHHHHHHHHHHSC
T ss_pred eeCCCCCEeeCCCcccCCCCEEEEEecCCC----Ccc---HhHHHHHHHHHHHHHcCC
Confidence 33 346666778888999999999999832 222 334578899999998854
No 121
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.18 E-value=2.5e-10 Score=111.93 Aligned_cols=163 Identities=15% Similarity=0.146 Sum_probs=112.7
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
-.|+|||+|..|+.+|..|++. |.+|+|+|+.+.+... ...++.+.+.+
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtli~~~~~~l~~------------------------------~~~~~~~~l~~ 226 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRI-GSEVTVVEFASEIVPT------------------------------MDAEIRKQFQR 226 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHH-TCEEEEECSSSSSSTT------------------------------SCHHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCcEEEEEcCCccccc------------------------------ccHHHHHHHHH
Confidence 4799999999999999999999 9999999998644210 11334444555
Q ss_pred HHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCccccccc
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDMN 266 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~~ 266 (352)
.+. +.|+++++++.+.++..+++.+ .+.+.+ . .+|+..++.+|.||+|+|..+.....+. ...++..+
T Consensus 227 ~l~-~~gv~i~~~~~v~~i~~~~~~~-~v~~~~------~---~~g~~~~~~~D~vv~a~G~~p~~~~l~~-~~~gl~~~ 294 (470)
T 1dxl_A 227 SLE-KQGMKFKLKTKVVGVDTSGDGV-KLTVEP------S---AGGEQTIIEADVVLVSAGRTPFTSGLNL-DKIGVETD 294 (470)
T ss_dssp HHH-HSSCCEECSEEEEEEECSSSSE-EEEEEE------S---SSCCCEEEEESEEECCCCEEECCTTSCC-TTTTCCBC
T ss_pred HHH-HcCCEEEeCCEEEEEEEcCCeE-EEEEEe------c---CCCcceEEECCEEEECCCCCcCCCCCCc-hhcCCccC
Confidence 554 5699999999999998765443 233321 0 0113468999999999997654322111 11223333
Q ss_pred -cccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHH
Q 039605 267 -TAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 319 (352)
Q Consensus 267 -~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~ 319 (352)
.+.+.+.+++++..|++|++||+... + .....+..+|+.||..|..
T Consensus 295 ~~G~i~vd~~~~t~~~~Iya~GD~~~~----~---~~~~~A~~~g~~aa~~i~g 341 (470)
T 1dxl_A 295 KLGRILVNERFSTNVSGVYAIGDVIPG----P---MLAHKAEEDGVACVEYLAG 341 (470)
T ss_dssp SSSCBCCCTTCBCSSTTEEECSTTSSS----C---CCHHHHHHHHHHHHHHHTT
T ss_pred CCCCEeECcCCccCCCCEEEEeccCCC----C---ccHHHHHHHHHHHHHHHcC
Confidence 46666778888999999999999742 1 1234557899999999975
No 122
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.18 E-value=2.1e-10 Score=109.10 Aligned_cols=127 Identities=20% Similarity=0.264 Sum_probs=83.3
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCC--CCcc---eeec-------------chHH------------
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPG--GASG---SVVR-------------KPAH------------ 155 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~G--G~~~---~~~~-------------~~~~------------ 155 (352)
++||+|||||++|+++|++|+++ |++|+|||+....+ |... ..+. ....
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~-G~~V~vie~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~ 81 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQ-GVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGEGREYVPLALRSQELWYELEKETHH 81 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSCSSCSSSSSCSSEEEECSSCTTCGGGHHHHHHHHHHHHHHHHHCSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCCCCCCCCCCCcchhhhhhhcCCchHHHHHHHHHHHHHHHHHHhCC
Confidence 58999999999999999999999 99999999987654 3310 0000 0001
Q ss_pred ------------------------HHHHHcCCccccC---------C-----Ce--E------EEechHHHHHHHHHHHH
Q 039605 156 ------------------------LFLDELGIDYDEQ---------D-----NY--V------VIKHAALFTSTIMSKLL 189 (352)
Q Consensus 156 ------------------------~~l~~~Gi~~~~~---------~-----~~--~------~~~~~~~~~~~L~~~~~ 189 (352)
+++...|+++... + .. . ...+...+...|.+.+.
T Consensus 82 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 161 (389)
T 2gf3_A 82 KIFTKTGVLVFGPKGESAFVAETMEAAKEHSLTVDLLEGDEINKRWPGITVPENYNAIFEPNSGVLFSENCIRAYRELAE 161 (389)
T ss_dssp CCEECCCEEEEEETTCCHHHHHHHHHHHHTTCCCEEEETHHHHHHSTTCCCCTTEEEEEETTCEEEEHHHHHHHHHHHHH
T ss_pred cceeecceEEEcCCCchHHHHHHHHHHHHcCCCcEEcCHHHHHHhCCCcccCCCceEEEeCCCcEEeHHHHHHHHHHHHH
Confidence 1112223221100 0 00 0 11233566777777776
Q ss_pred cCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 190 ARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 190 ~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
+.|++++++++|+++..+++++ .+.+.+ .+++||.||+|+|.++
T Consensus 162 -~~Gv~i~~~~~v~~i~~~~~~~-~v~~~~---------------g~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 162 -ARGAKVLTHTRVEDFDISPDSV-KIETAN---------------GSYTADKLIVSMGAWN 205 (389)
T ss_dssp -HTTCEEECSCCEEEEEECSSCE-EEEETT---------------EEEEEEEEEECCGGGH
T ss_pred -HCCCEEEcCcEEEEEEecCCeE-EEEeCC---------------CEEEeCEEEEecCccH
Confidence 4699999999999999876654 344422 3799999999999875
No 123
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.18 E-value=8.7e-11 Score=111.16 Aligned_cols=128 Identities=16% Similarity=0.244 Sum_probs=82.8
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCC-----cceeec----c---------hHH------------
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGA-----SGSVVR----K---------PAH------------ 155 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~-----~~~~~~----~---------~~~------------ 155 (352)
++||+|||||++|+++|++|+++ |++|+|||+....++. ....+. . ...
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~-G~~V~vle~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~ 80 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRA-GLNVLMTDAHMPPHQHGSHHGDTRLIRHAYGEGEKYVPLVLRAQMLWDELSRHNED 80 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHT-TCCEEEECSSCSSSSSSSCCSSEEEECSSCTTCGGGHHHHHHHHHHHHHHHTTCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCeEEEEecCCCCCCCCCCCCccceeeeccCCCchHHHHHHHHHHHHHHHHHhCCC
Confidence 57999999999999999999999 9999999998655321 000000 0 001
Q ss_pred ------------------------HHHHHcCCccccC---------------CCe-------EEEechHHHHHHHHHHHH
Q 039605 156 ------------------------LFLDELGIDYDEQ---------------DNY-------VVIKHAALFTSTIMSKLL 189 (352)
Q Consensus 156 ------------------------~~l~~~Gi~~~~~---------------~~~-------~~~~~~~~~~~~L~~~~~ 189 (352)
++++.+|+++... ..+ ....+...+...|.+.+.
T Consensus 81 ~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~ 160 (372)
T 2uzz_A 81 DPIFVRSGVINLGPADSTFLANVAHSAEQWQLNVEKLDAQGIMARWPEIRVPDNYIGLFETDSGFLRSELAIKTWIQLAK 160 (372)
T ss_dssp SCSEECCCEEEEEETTCHHHHHHHHHHHHTTCCEEEEEHHHHHHHCTTCCCCTTEEEEEESSCEEEEHHHHHHHHHHHHH
T ss_pred ccceeeeceEEEeCCCcHHHHHHHHHHHHcCCCcEecCHHHHHhhCCCccCCCCceEEEeCCCcEEcHHHHHHHHHHHHH
Confidence 1112223221100 000 001223456677777766
Q ss_pred cCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCC
Q 039605 190 ARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGP 251 (352)
Q Consensus 190 ~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~ 251 (352)
+.|++++++++|+++..+++++ .+.+.+ .+++||.||+|+|.++.
T Consensus 161 -~~G~~i~~~~~V~~i~~~~~~~-~v~~~~---------------g~~~a~~vV~a~G~~s~ 205 (372)
T 2uzz_A 161 -EAGCAQLFNCPVTAIRHDDDGV-TIETAD---------------GEYQAKKAIVCAGTWVK 205 (372)
T ss_dssp -HTTCEEECSCCEEEEEECSSSE-EEEESS---------------CEEEEEEEEECCGGGGG
T ss_pred -HCCCEEEcCCEEEEEEEcCCEE-EEEECC---------------CeEEcCEEEEcCCccHH
Confidence 5699999999999999876654 354432 25999999999998864
No 124
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.18 E-value=1.9e-10 Score=107.50 Aligned_cols=161 Identities=17% Similarity=0.198 Sum_probs=110.2
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHH
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIM 185 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~ 185 (352)
.-.|+|||+|..|+-.|..|++. |.+|+++++.+.+.. . ..+.
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~-g~~V~l~~~~~~~~~--------------------------------~----~~~~ 197 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRF-ARSVTLVHRRDEFRA--------------------------------S----KIML 197 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTT-CSEEEEECSSSSCSS--------------------------------C----TTHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHh-CCeEEEEEcCCcCCc--------------------------------c----HHHH
Confidence 34799999999999999999999 999999998764310 0 0122
Q ss_pred HHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCcccccc
Q 039605 186 SKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDM 265 (352)
Q Consensus 186 ~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~ 265 (352)
+++.++.|+++++++.+.++..++ ++.++.+.+. .+|+..++.+|.||+|+|..+..... . ..+..
T Consensus 198 ~~~~~~~gV~v~~~~~v~~i~~~~-~~~~v~~~~~---------~~g~~~~i~~D~vi~a~G~~p~~~~~---~-~~l~~ 263 (335)
T 2a87_A 198 DRARNNDKIRFLTNHTVVAVDGDT-TVTGLRVRDT---------NTGAETTLPVTGVFVAIGHEPRSGLV---R-EAIDV 263 (335)
T ss_dssp HHHHHCTTEEEECSEEEEEEECSS-SCCEEEEEEE---------TTSCCEEECCSCEEECSCEEECCTTT---B-TTBCB
T ss_pred HHHhccCCcEEEeCceeEEEecCC-cEeEEEEEEc---------CCCceEEeecCEEEEccCCccChhHh---h-ccccc
Confidence 233346799999999999987654 3444554321 01234689999999999975443221 1 12333
Q ss_pred c-cccceeecc-cccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHHcCC
Q 039605 266 N-TAEDAIVKL-TREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQ 323 (352)
Q Consensus 266 ~-~g~~~vv~~-~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~l~~ 323 (352)
+ .+...+.++ ..+..|++|++||+.... ++ ....++.+|..||..|.++|.+
T Consensus 264 ~~~G~i~vd~~~~~t~~~~iya~GD~~~~~---~~---~~~~A~~~g~~aA~~i~~~l~~ 317 (335)
T 2a87_A 264 DPDGYVLVQGRTTSTSLPGVFAAGDLVDRT---YR---QAVTAAGSGCAAAIDAERWLAE 317 (335)
T ss_dssp CTTSCBCCSTTSSBCSSTTEEECGGGTCCS---CC---CHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCccEEeCCCCCccCCCCEEEeeecCCcc---HH---HHHHHHHhHHHHHHHHHHHhhc
Confidence 2 455444443 467899999999998531 12 2344578899999999999854
No 125
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.17 E-value=4.1e-10 Score=111.14 Aligned_cols=165 Identities=12% Similarity=0.116 Sum_probs=111.1
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
-.++|||+|..|+.+|..|++. |.+|+++++...... ...++.+.+.+
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~l~~-------------------------------~d~~~~~~l~~ 233 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGI-GLDTTVMMRSIPLRG-------------------------------FDQQMSSLVTE 233 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCSSTT-------------------------------SCHHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCceEEEEcCccccc-------------------------------CCHHHHHHHHH
Confidence 3699999999999999999999 999999998642210 01344444455
Q ss_pred HHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCccccccc
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDMN 266 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~~ 266 (352)
.+. +.|+++++++.+.++...++....+.+.+. .+ ++..++.+|.||+|+|..+.....++ ...++..+
T Consensus 234 ~l~-~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~------~~---g~~~~~~~D~vi~a~G~~p~~~~l~l-~~~g~~~~ 302 (488)
T 3dgz_A 234 HME-SHGTQFLKGCVPSHIKKLPTNQLQVTWEDH------AS---GKEDTGTFDTVLWAIGRVPETRTLNL-EKAGISTN 302 (488)
T ss_dssp HHH-HTTCEEEETEEEEEEEECTTSCEEEEEEET------TT---TEEEEEEESEEEECSCEEESCGGGTG-GGGTCCBC
T ss_pred HHH-HCCCEEEeCCEEEEEEEcCCCcEEEEEEeC------CC---CeeEEEECCEEEEcccCCcccCcCCc-cccCcEec
Confidence 554 579999999999999875433223444220 11 12346899999999996543322111 11223333
Q ss_pred --cccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHH
Q 039605 267 --TAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKS 320 (352)
Q Consensus 267 --~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~ 320 (352)
.+.+.+.+++++..|++|++||+... .++ ....+..+|+.||..|+..
T Consensus 303 ~~~G~i~vd~~~~t~~~~IyA~GD~~~~---~~~---~~~~A~~~g~~aa~~i~g~ 352 (488)
T 3dgz_A 303 PKNQKIIVDAQEATSVPHIYAIGDVAEG---RPE---LTPTAIKAGKLLAQRLFGK 352 (488)
T ss_dssp SSSCCBCCCTTSBCSSTTEEECGGGBTT---CCC---CHHHHHHHHHHHHHHHHSC
T ss_pred CCCCeEeECCCCccCCCCEEEeEEecCC---CCc---chhHHHHHHHHHHHHHcCC
Confidence 46666778888999999999999742 122 2334578999999998853
No 126
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.17 E-value=1.1e-09 Score=107.51 Aligned_cols=163 Identities=14% Similarity=0.059 Sum_probs=113.5
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHH
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIM 185 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~ 185 (352)
.-.++|||+|..|+..|..|++. |.+|+++++.+.+... ...++.+.+.
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~~------------------------------~~~~~~~~l~ 228 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARL-GAEVTVLEAMDKFLPA------------------------------VDEQVAKEAQ 228 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSSSTT------------------------------SCHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CCcEEEEecCCCcCcc------------------------------cCHHHHHHHH
Confidence 34799999999999999999999 9999999998643210 1133444445
Q ss_pred HHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCcccccc
Q 039605 186 SKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDM 265 (352)
Q Consensus 186 ~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~ 265 (352)
+.+. +.|++++.++.+.++..+++++. +.+.++ + + ..++.+|.||+|+|..+...... ....++..
T Consensus 229 ~~l~-~~Gv~v~~~~~v~~i~~~~~~~~-v~~~~~-------~---g-~~~~~~D~vi~a~G~~p~~~~l~-~~~~g~~~ 294 (476)
T 3lad_A 229 KILT-KQGLKILLGARVTGTEVKNKQVT-VKFVDA-------E---G-EKSQAFDKLIVAVGRRPVTTDLL-AADSGVTL 294 (476)
T ss_dssp HHHH-HTTEEEEETCEEEEEEECSSCEE-EEEESS-------S---E-EEEEEESEEEECSCEEECCTTCC-SSCCSCCB
T ss_pred HHHH-hCCCEEEECCEEEEEEEcCCEEE-EEEEeC-------C---C-cEEEECCEEEEeeCCcccCCCCC-ccccCccc
Confidence 5554 67999999999999988766553 444321 0 1 25799999999999754332111 11222333
Q ss_pred c-cccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHH
Q 039605 266 N-TAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKS 320 (352)
Q Consensus 266 ~-~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~ 320 (352)
+ .+.+.+.+++++..|++|++||+... +. ....+..+|+.||+.|...
T Consensus 295 ~~~G~i~vd~~~~t~~~~Iya~GD~~~~----~~---~~~~A~~~g~~aa~~i~g~ 343 (476)
T 3lad_A 295 DERGFIYVDDYCATSVPGVYAIGDVVRG----AM---LAHKASEEGVVVAERIAGH 343 (476)
T ss_dssp CTTSCBCCCTTSBCSSTTEEECGGGSSS----CC---CHHHHHHHHHHHHHHHHHC
T ss_pred cCCCCEeeCCCcccCCCCEEEEEccCCC----cc---cHHHHHHHHHHHHHHhcCC
Confidence 3 45666678888999999999999832 22 2345578999999999853
No 127
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.17 E-value=1.1e-10 Score=114.74 Aligned_cols=166 Identities=15% Similarity=0.148 Sum_probs=114.7
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHH
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIM 185 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~ 185 (352)
.-.++|||+|..|+.+|..|++..|.+|+++++.+..... ....++...+.
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~-----------------------------~~~~~~~~~l~ 209 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPG-----------------------------FTSKSLSQMLR 209 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTT-----------------------------TSCHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccccc-----------------------------ccCHHHHHHHH
Confidence 3479999999999999999987437899999987643210 01134444555
Q ss_pred HHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCcccccc
Q 039605 186 SKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDM 265 (352)
Q Consensus 186 ~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~ 265 (352)
+.+. +.|++++.++++.++..+++++. +.+.+ ..++.+|.||+|+|..+.... ....++..
T Consensus 210 ~~l~-~~GV~i~~~~~v~~i~~~~~~v~-v~~~~--------------g~~i~aD~Vv~a~G~~p~~~l---~~~~gl~~ 270 (472)
T 3iwa_A 210 HDLE-KNDVVVHTGEKVVRLEGENGKVA-RVITD--------------KRTLDADLVILAAGVSPNTQL---ARDAGLEL 270 (472)
T ss_dssp HHHH-HTTCEEECSCCEEEEEESSSBEE-EEEES--------------SCEEECSEEEECSCEEECCHH---HHHHTCCB
T ss_pred HHHH-hcCCEEEeCCEEEEEEccCCeEE-EEEeC--------------CCEEEcCEEEECCCCCcCHHH---HHhCCccC
Confidence 5554 57999999999999988777665 44433 248999999999997643321 11122333
Q ss_pred c-cccceeecccccccCceeEecchhhhhc---CCCCCCcchhhhhhchHHHHHHHHH
Q 039605 266 N-TAEDAIVKLTREIVPGMIVAGMEVAEID---GAPRMGPTFGAMMISGQKAAHLALK 319 (352)
Q Consensus 266 ~-~g~~~vv~~~~~~~pg~~~aG~~~~~~~---g~~r~g~~~~~~~~sG~~aA~~i~~ 319 (352)
+ .+.+.+.+++++..|++|++||+....+ |.+...+.+..+..+|+.||..|..
T Consensus 271 ~~~g~i~vd~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 328 (472)
T 3iwa_A 271 DPRGAIIVDTRMRTSDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLAD 328 (472)
T ss_dssp CTTCCEECCTTCBCSSTTEEECGGGEEEEBTTTSSEECCCCTTHHHHHHHHHHHHHTT
T ss_pred CCCCCEEECCCcccCCCCEEEeccceecccccCCceeecchHHHHHHHHHHHHHHhcC
Confidence 2 3555666788889999999999985432 2222233455667899999998874
No 128
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.17 E-value=3.7e-10 Score=108.86 Aligned_cols=38 Identities=37% Similarity=0.532 Sum_probs=35.8
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGA 145 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~ 145 (352)
+||+|||||++||+||++|+++ |++|+|||+++.+||.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~-G~~V~vlE~~~~~GG~ 38 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKA-GHEVEVFERLPITGGR 38 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHT-TCEEEEECSSSSSBTT
T ss_pred CcEEEECCCHHHHHHHHHHHhC-CCceEEEeCCCCCCCc
Confidence 3899999999999999999999 9999999999988876
No 129
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.16 E-value=5e-10 Score=109.84 Aligned_cols=164 Identities=15% Similarity=0.164 Sum_probs=112.2
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
-.++|||+|..|+.+|..|++. |.+|+++|+.+.+... ...++...+.+
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~~------------------------------~d~~~~~~l~~ 223 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARL-GAEVTVVEFAPRCAPT------------------------------LDEDVTNALVG 223 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSSTT------------------------------SCHHHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHh-CCEEEEEecCCccccc------------------------------CCHHHHHHHHH
Confidence 4799999999999999999999 9999999998654210 01334445555
Q ss_pred HHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCccccccc
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDMN 266 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~~ 266 (352)
.+.++.|+++++++++.++..+++++ .+.+.. . +|+..++.+|.||+|+|..+.....+. ...++..+
T Consensus 224 ~l~~~~gv~i~~~~~v~~i~~~~~~~-~v~~~~-------~---~g~~~~i~~D~vv~a~G~~p~~~~l~l-~~~gl~~~ 291 (468)
T 2qae_A 224 ALAKNEKMKFMTSTKVVGGTNNGDSV-SLEVEG-------K---NGKRETVTCEALLVSVGRRPFTGGLGL-DKINVAKN 291 (468)
T ss_dssp HHHHHTCCEEECSCEEEEEEECSSSE-EEEEEC-------C------EEEEEESEEEECSCEEECCTTSCH-HHHTCCBC
T ss_pred HHhhcCCcEEEeCCEEEEEEEcCCeE-EEEEEc-------C---CCceEEEECCEEEECCCcccCCCCCCc-hhcCCccC
Confidence 55135799999999999998765543 343321 0 112357999999999997654322111 11123333
Q ss_pred -cccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHH
Q 039605 267 -TAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 319 (352)
Q Consensus 267 -~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~ 319 (352)
.|.+.+.+++++..|++|++||+... .+. ....+..+|+.||..|..
T Consensus 292 ~~G~i~vd~~~~t~~~~IyA~GD~~~~---~~~---~~~~A~~~g~~aa~~i~~ 339 (468)
T 2qae_A 292 ERGFVKIGDHFETSIPDVYAIGDVVDK---GPM---LAHKAEDEGVACAEILAG 339 (468)
T ss_dssp TTSCBCCCTTSBCSSTTEEECGGGBSS---SCS---CHHHHHHHHHHHHHHHTT
T ss_pred CCCCEeECCCcccCCCCEEEeeccCCC---CCc---cHhHHHHHHHHHHHHHcC
Confidence 46666778888999999999999852 111 234557889999999875
No 130
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.16 E-value=6.6e-11 Score=113.53 Aligned_cols=119 Identities=13% Similarity=0.057 Sum_probs=78.0
Q ss_pred cCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCcccccccccc
Q 039605 190 ARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDMNTAE 269 (352)
Q Consensus 190 ~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~~~g~ 269 (352)
++.|++++.++.+..+..+.+.. .+.+.+ .+++.+|.|++++|..++.. ....++..+.|.
T Consensus 213 ~~~gi~v~~~~~v~~v~~~~~~~-~v~~~~--------------g~~i~~D~vi~~~g~~~~~~----~~~~gl~~~~G~ 273 (401)
T 3vrd_B 213 ENALIEWHPGPDAAVVKTDTEAM-TVETSF--------------GETFKAAVINLIPPQRAGKI----AQSASLTNDSGW 273 (401)
T ss_dssp TTCSEEEECTTTTCEEEEETTTT-EEEETT--------------SCEEECSEEEECCCEEECHH----HHHTTCCCTTSS
T ss_pred HhcCcEEEeCceEEEEEecccce-EEEcCC--------------CcEEEeeEEEEecCcCCchh----HhhccccccCCC
Confidence 45689999988888877664432 244432 36899999999999643311 111223345566
Q ss_pred ceeeccc--ccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHHcCCCCCCCCce
Q 039605 270 DAIVKLT--REIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNAMDGTY 331 (352)
Q Consensus 270 ~~vv~~~--~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~l~~~~~~~~~~ 331 (352)
+.+.+++ .+..|++|++||++... +.+ .+...+..+|+.+|+.|+..|+++....-.|
T Consensus 274 i~VD~~tl~~t~~p~VfAiGDva~~~-~~p---k~a~~A~~qa~v~A~ni~~~l~G~~~~~~~y 333 (401)
T 3vrd_B 274 CPVDIRTFESSLQPGIHVIGDACNAA-PMP---KSAYSANSQAKVAAAAVVALLKGEEPGTPSY 333 (401)
T ss_dssp BCBCTTTCBBSSSTTEEECGGGBCCT-TSC---BSHHHHHHHHHHHHHHHHHHHHTCCCCCCCE
T ss_pred EEECCCcceecCCCCEEEecccccCC-CCC---chHHHHHHHHHHHHHHHHHHhcCCCCCCccc
Confidence 6666654 46789999999997532 112 2344567899999999999997765544333
No 131
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.16 E-value=1.9e-10 Score=116.07 Aligned_cols=161 Identities=12% Similarity=0.126 Sum_probs=112.6
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
-.++|||+|..|+.+|..|++. |.+|+++++.+..... ...++...+.+
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~~------------------------------~~~~~~~~l~~ 236 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRER-GIEVTLVEMANQVMPP------------------------------IDYEMAAYVHE 236 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSCTT------------------------------SCHHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCeEEEEecCCccccc------------------------------CCHHHHHHHHH
Confidence 4799999999999999999999 9999999987643210 11334444455
Q ss_pred HHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCcccccc-
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDM- 265 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~- 265 (352)
.+. +.|++++.++.+.++..+++ ++.+.+ ..++.+|.||+|+|..+.... ....++..
T Consensus 237 ~l~-~~GV~i~~~~~v~~i~~~~~---~v~~~~--------------g~~i~~D~Vi~a~G~~p~~~~---l~~~g~~~~ 295 (588)
T 3ics_A 237 HMK-NHDVELVFEDGVDALEENGA---VVRLKS--------------GSVIQTDMLILAIGVQPESSL---AKGAGLALG 295 (588)
T ss_dssp HHH-HTTCEEECSCCEEEEEGGGT---EEEETT--------------SCEEECSEEEECSCEEECCHH---HHHTTCCBC
T ss_pred HHH-HcCCEEEECCeEEEEecCCC---EEEECC--------------CCEEEcCEEEEccCCCCChHH---HHhcCceEc
Confidence 454 67999999999999876544 344432 257999999999997544321 11112332
Q ss_pred ccccceeecccccccCceeEecchhhhhc---CCCCCCcchhhhhhchHHHHHHHHH
Q 039605 266 NTAEDAIVKLTREIVPGMIVAGMEVAEID---GAPRMGPTFGAMMISGQKAAHLALK 319 (352)
Q Consensus 266 ~~g~~~vv~~~~~~~pg~~~aG~~~~~~~---g~~r~g~~~~~~~~sG~~aA~~i~~ 319 (352)
..+.+.+.+++++..|++|++||+....+ |.+...+.+..+..+|+.||..|+.
T Consensus 296 ~~g~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 352 (588)
T 3ics_A 296 VRGTIKVNEKFQTSDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLADIIHG 352 (588)
T ss_dssp GGGCBCCCTTSBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEECCccccCCCCEEEeeeeeecccccCCcccccccHHHHHHHHHHHHHHhcC
Confidence 34566667888899999999999985432 3222234555668899999998874
No 132
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.16 E-value=1.7e-10 Score=114.86 Aligned_cols=159 Identities=14% Similarity=0.154 Sum_probs=112.5
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
-.++|||+|..|+.+|..|++. |.+|+++|+.+..... ...++...+.+
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~-G~~Vtlv~~~~~~l~~------------------------------~~~~~~~~l~~ 263 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNAT-GRRTVMLVRTEPLKLI------------------------------KDNETRAYVLD 263 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCTTTTC------------------------------CSHHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCeEEEEEecCccccc------------------------------ccHHHHHHHHH
Confidence 5799999999999999999999 9999999998643210 12344455555
Q ss_pred HHHcCCCcEEEccceeEEEEEeC-CEEE--EEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCcccc
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKG-NRVG--GIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKAL 263 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~-g~v~--gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~ 263 (352)
.+. +.|+++++++++.++..++ +++. .+.+.+| ..++.+|.||+|+|..+.... +....++
T Consensus 264 ~l~-~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G-------------~~~i~aD~Vv~A~G~~p~~~~--~l~~~gl 327 (523)
T 1mo9_A 264 RMK-EQGMEIISGSNVTRIEEDANGRVQAVVAMTPNG-------------EMRIETDFVFLGLGEQPRSAE--LAKILGL 327 (523)
T ss_dssp HHH-HTTCEEESSCEEEEEEECTTSBEEEEEEEETTE-------------EEEEECSCEEECCCCEECCHH--HHHHHTC
T ss_pred HHH-hCCcEEEECCEEEEEEEcCCCceEEEEEEECCC-------------cEEEEcCEEEECcCCccCCcc--CHHHcCC
Confidence 555 5699999999999998754 4442 3444321 127999999999997654320 1111223
Q ss_pred cc-ccccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHH
Q 039605 264 DM-NTAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 319 (352)
Q Consensus 264 ~~-~~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~ 319 (352)
.. ..|.+.+.+++++..|++|++||+... + .....+..+|+.||..|..
T Consensus 328 ~~~~~G~i~Vd~~~~t~~~~IyA~GD~~~~----~---~~~~~A~~~g~~aa~~i~g 377 (523)
T 1mo9_A 328 DLGPKGEVLVNEYLQTSVPNVYAVGDLIGG----P---MEMFKARKSGCYAARNVMG 377 (523)
T ss_dssp CBCTTSCBCCCTTSBCSSTTEEECGGGGCS----S---CSHHHHHHHHHHHHHHHTT
T ss_pred ccCCCCCEEECCCCccCCCCEEEEeecCCC----c---ccHHHHHHHHHHHHHHHcC
Confidence 33 246666778888999999999999843 1 1234557899999999874
No 133
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.16 E-value=3.7e-10 Score=111.57 Aligned_cols=160 Identities=9% Similarity=0.031 Sum_probs=112.7
Q ss_pred ccEEEECCcHHHHHHHHHHhcC--CCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKN--PNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTI 184 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~--~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L 184 (352)
-.++|||+|..|+.+|..|++. +|.+|++||+.+.+... ...++.+.+
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~------------------------------~d~~~~~~l 237 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRG------------------------------FDSELRKQL 237 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTT------------------------------SCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccc------------------------------cCHHHHHHH
Confidence 4799999999999999999874 28999999998643210 013444555
Q ss_pred HHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCccccc
Q 039605 185 MSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALD 264 (352)
Q Consensus 185 ~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~ 264 (352)
.+.+. +.|+++++++.+.++..++++...+.+.+| .++.+|.||+|+|..+.....+ ....++.
T Consensus 238 ~~~l~-~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G--------------~~i~~D~vv~a~G~~p~~~~L~-l~~~gl~ 301 (490)
T 1fec_A 238 TEQLR-ANGINVRTHENPAKVTKNADGTRHVVFESG--------------AEADYDVVMLAIGRVPRSQTLQ-LEKAGVE 301 (490)
T ss_dssp HHHHH-HTTEEEEETCCEEEEEECTTSCEEEEETTS--------------CEEEESEEEECSCEEESCTTSC-GGGGTCC
T ss_pred HHHHH-hCCCEEEeCCEEEEEEEcCCCEEEEEECCC--------------cEEEcCEEEEccCCCcCccccC-chhcCcc
Confidence 55554 579999999999999876543334555332 4799999999999765432111 1222344
Q ss_pred cc-cccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHH
Q 039605 265 MN-TAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 319 (352)
Q Consensus 265 ~~-~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~ 319 (352)
.+ .+.+.+.+++++..|++|++||+... + ..+..+..+|+.+|..|..
T Consensus 302 ~~~~G~I~Vd~~~~t~~~~IyA~GD~~~~----~---~l~~~A~~~g~~aa~~i~g 350 (490)
T 1fec_A 302 VAKNGAIKVDAYSKTNVDNIYAIGDVTDR----V---MLTPVAINEGAAFVDTVFA 350 (490)
T ss_dssp BCTTSCBCCCTTCBCSSTTEEECGGGGCS----C---CCHHHHHHHHHHHHHHHHS
T ss_pred CCCCCCEEECCCCccCCCCEEEEeccCCC----c---cCHHHHHHHHHHHHHHhcC
Confidence 43 56666778888999999999999842 1 2344567899999999874
No 134
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.15 E-value=3.7e-10 Score=111.71 Aligned_cols=160 Identities=10% Similarity=0.098 Sum_probs=111.8
Q ss_pred ccEEEECCcHHHHHHHHHHhcCC--CCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNP--NVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTI 184 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~--G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L 184 (352)
-.++|||+|..|+.+|..|++.. |.+|+|||+.+.+... ...++...+
T Consensus 192 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~------------------------------~d~~~~~~l 241 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRG------------------------------FDETIREEV 241 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTT------------------------------SCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccc------------------------------cCHHHHHHH
Confidence 47999999999999999998742 8999999998643210 013344455
Q ss_pred HHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCccccc
Q 039605 185 MSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALD 264 (352)
Q Consensus 185 ~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~ 264 (352)
.+.+. +.|+++++++.+.++..++++...+.+.+| .++.+|.||+|+|..+.....+ ....++.
T Consensus 242 ~~~l~-~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G--------------~~i~~D~vv~a~G~~p~~~~L~-l~~~gl~ 305 (495)
T 2wpf_A 242 TKQLT-ANGIEIMTNENPAKVSLNTDGSKHVTFESG--------------KTLDVDVVMMAIGRIPRTNDLQ-LGNVGVK 305 (495)
T ss_dssp HHHHH-HTTCEEEESCCEEEEEECTTSCEEEEETTS--------------CEEEESEEEECSCEEECCGGGT-GGGTTCC
T ss_pred HHHHH-hCCCEEEeCCEEEEEEEcCCceEEEEECCC--------------cEEEcCEEEECCCCcccccccc-hhhcCcc
Confidence 55554 579999999999999876543334555332 4799999999999754432111 1122333
Q ss_pred cc-cccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHH
Q 039605 265 MN-TAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 319 (352)
Q Consensus 265 ~~-~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~ 319 (352)
.+ .+.+.+.+++++..|++|++||+... + ..+..+..+|+.||..|+.
T Consensus 306 ~~~~G~i~Vd~~~~t~~~~IyA~GD~~~~----~---~l~~~A~~~g~~aa~~i~g 354 (495)
T 2wpf_A 306 LTPKGGVQVDEFSRTNVPNIYAIGDITDR----L---MLTPVAINEGAALVDTVFG 354 (495)
T ss_dssp BCTTSSBCCCTTCBCSSTTEEECGGGGCS----C---CCHHHHHHHHHHHHHHHHS
T ss_pred CCCCCCEEECCCCccCCCCEEEEeccCCC----c---cCHHHHHHHHHHHHHHhcC
Confidence 33 46666678888999999999999842 1 2344567899999999874
No 135
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.15 E-value=3.2e-10 Score=113.40 Aligned_cols=133 Identities=18% Similarity=0.151 Sum_probs=83.0
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCccee------ecch--------HHHHHHHcCCccccCCC
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSV------VRKP--------AHLFLDELGIDYDEQDN 170 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~------~~~~--------~~~~l~~~Gi~~~~~~~ 170 (352)
.++||+|||||++|+++|+.|++. |++|+|||+.+.+||.+... ...+ ....+..+.+ ...
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~-G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~----~~~ 89 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLREL-GRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNW----TER 89 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCC----CBS
T ss_pred CCCCEEEECccHHHHHHHHHHHhC-CCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCc----ccc
Confidence 368999999999999999999999 99999999998888753210 0000 0011111111 111
Q ss_pred eEEEechHHHHHHHHHHHHcC-CCcEEEccceeEEEEEeCC-EEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCC
Q 039605 171 YVVIKHAALFTSTIMSKLLAR-PNVKLFNAVAAEDLIVKGN-RVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGH 248 (352)
Q Consensus 171 ~~~~~~~~~~~~~L~~~~~~~-~gv~i~~~t~v~~l~~~~g-~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~ 248 (352)
+ ....++.+.+...+.+. .+..++++++|.++..+++ ..+.|.+.+ ..+++||.||+|+|.
T Consensus 90 ~---~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~--------------G~~~~ad~vV~AtG~ 152 (542)
T 1w4x_A 90 Y---ASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNH--------------GDRIRARYLIMASGQ 152 (542)
T ss_dssp S---CBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETT--------------CCEEEEEEEEECCCS
T ss_pred c---CCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECC--------------CCEEEeCEEEECcCC
Confidence 1 12334444433333221 2467889999999998753 333455533 247999999999998
Q ss_pred CCCCCCCCCCC
Q 039605 249 DGPFGATGVRG 259 (352)
Q Consensus 249 ~~~~~~~g~~g 259 (352)
++....+.++|
T Consensus 153 ~s~p~~p~i~G 163 (542)
T 1w4x_A 153 LSVPQLPNFPG 163 (542)
T ss_dssp CCCCCCCCCTT
T ss_pred CCCCCCCCCCC
Confidence 76544444444
No 136
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.15 E-value=2.4e-10 Score=106.52 Aligned_cols=126 Identities=15% Similarity=0.131 Sum_probs=77.5
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCccee-------------e--cch-HHHHHHH---cCCccc
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSV-------------V--RKP-AHLFLDE---LGIDYD 166 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~-------------~--~~~-~~~~l~~---~Gi~~~ 166 (352)
.+||+|||||++|+++|+.|++. |++|+||||.+.+||..... + ..+ ..+++.. .+....
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~-G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAA-GHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAE 80 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEE
T ss_pred CceEEEECCcHHHHHHHHHHHHC-CCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeee
Confidence 46999999999999999999999 99999999998777642110 0 011 1222222 222111
Q ss_pred cCCC----------------eEEEechHHHHHHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCC
Q 039605 167 EQDN----------------YVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQS 230 (352)
Q Consensus 167 ~~~~----------------~~~~~~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~ 230 (352)
+... ..+.. ......+.+.+.+ |++++++++|+++..+++.+. +.+.+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~l~~--g~~i~~~~~v~~i~~~~~~~~-v~~~~g---------- 145 (336)
T 1yvv_A 81 WTPLLYNFHAGRLSPSPDEQVRWVG--KPGMSAITRAMRG--DMPVSFSCRITEVFRGEEHWN-LLDAEG---------- 145 (336)
T ss_dssp ECCCEEEESSSBCCCCCTTSCEEEE--SSCTHHHHHHHHT--TCCEECSCCEEEEEECSSCEE-EEETTS----------
T ss_pred ccccceeccCcccccCCCCCccEEc--CccHHHHHHHHHc--cCcEEecCEEEEEEEeCCEEE-EEeCCC----------
Confidence 1000 01111 0112334444442 889999999999998877653 444332
Q ss_pred CCCCeEEEeCEEEEccCCCC
Q 039605 231 CMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 231 ~g~~~~i~A~~VIlAtG~~~ 250 (352)
.....++.||+|+|..+
T Consensus 146 ---~~~~~a~~vV~a~g~~~ 162 (336)
T 1yvv_A 146 ---QNHGPFSHVIIATPAPQ 162 (336)
T ss_dssp ---CEEEEESEEEECSCHHH
T ss_pred ---cCccccCEEEEcCCHHH
Confidence 23345999999999653
No 137
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.15 E-value=1.1e-10 Score=115.36 Aligned_cols=107 Identities=15% Similarity=0.129 Sum_probs=70.0
Q ss_pred CCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCccccccccccc
Q 039605 191 RPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDMNTAED 270 (352)
Q Consensus 191 ~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~~~g~~ 270 (352)
+.|+++++++.+.++..+ +++.++.+.+ ..++.+|.||+|+|..+........+...-+...+..
T Consensus 269 ~~GV~v~~~~~v~~i~~~-~~v~~v~~~~--------------g~~i~aD~Vv~a~G~~p~~~l~~~~g~~~~~~~~g~i 333 (493)
T 1y56_A 269 RWGIDYVHIPNVKRVEGN-EKVERVIDMN--------------NHEYKVDALIFADGRRPDINPITQAGGKLRFRRGYYS 333 (493)
T ss_dssp HHTCEEEECSSEEEEECS-SSCCEEEETT--------------CCEEECSEEEECCCEEECCHHHHHTTCCEEEETTEEE
T ss_pred hCCcEEEeCCeeEEEecC-CceEEEEeCC--------------CeEEEeCEEEECCCcCcCchHHHhcCCCccccCCcee
Confidence 569999999999998754 3454555432 2589999999999976543111011111001123443
Q ss_pred e-eecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHHc
Q 039605 271 A-IVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 321 (352)
Q Consensus 271 ~-vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~l 321 (352)
. +.++++ ..|++|++||+... ..+..++.+|+.||..|..++
T Consensus 334 ~~vd~~~~-s~~~vya~GD~~~~--------~~~~~A~~~g~~aa~~i~~~l 376 (493)
T 1y56_A 334 PVLDEYHR-IKDGIYVAGSAVSI--------KPHYANYLEGKLVGAYILKEF 376 (493)
T ss_dssp ECCCTTSE-EETTEEECSTTTCC--------CCHHHHHHHHHHHHHHHHHHT
T ss_pred eccccccC-cCCCEEEEeccCCc--------cCHHHHHHHHHHHHHHHHHHc
Confidence 3 345556 88999999999742 124456889999999999887
No 138
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.15 E-value=1.8e-10 Score=115.39 Aligned_cols=133 Identities=17% Similarity=0.173 Sum_probs=84.8
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCccee------ecch--------HHHHHHHcCCccccCCC
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSV------VRKP--------AHLFLDELGIDYDEQDN 170 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~------~~~~--------~~~~l~~~Gi~~~~~~~ 170 (352)
.++||||||||++|+.+|+.|++. |++|+|||+.+.+||.+... ...+ ..+....+++ ...
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~-G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~----~~~ 94 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQ-GLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNW----SEK 94 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCC----SSS
T ss_pred CCCCEEEECchHHHHHHHHHHHhC-CCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCC----ccC
Confidence 368999999999999999999999 99999999998888753210 0000 0011111111 111
Q ss_pred eEEEechHHHHHHHHHHHHcCCCc--EEEccceeEEEEEeCC-EEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccC
Q 039605 171 YVVIKHAALFTSTIMSKLLARPNV--KLFNAVAAEDLIVKGN-RVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCG 247 (352)
Q Consensus 171 ~~~~~~~~~~~~~L~~~~~~~~gv--~i~~~t~v~~l~~~~g-~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG 247 (352)
+ ....++...+.+.+. +.++ .++++++|+++..+++ ..+.|.+.+ ..++.+|.||+|+|
T Consensus 95 ~---~~~~ei~~yl~~~~~-~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~--------------G~~i~ad~lV~AtG 156 (549)
T 4ap3_A 95 Y---ATQPEILAYLEHVAD-RFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDR--------------GDEVSARFLVVAAG 156 (549)
T ss_dssp S---CBHHHHHHHHHHHHH-HTTCGGGEECSCCEEEEEEETTTTEEEEEETT--------------CCEEEEEEEEECCC
T ss_pred C---CCHHHHHHHHHHHHH-HcCCCccEEECCEEEEEEEcCCCCEEEEEECC--------------CCEEEeCEEEECcC
Confidence 1 123445444444443 4566 7899999999998764 233455543 24799999999999
Q ss_pred CCCCCCCCCCCCc
Q 039605 248 HDGPFGATGVRGM 260 (352)
Q Consensus 248 ~~~~~~~~g~~g~ 260 (352)
..+.+..+.++|.
T Consensus 157 ~~s~p~~p~ipG~ 169 (549)
T 4ap3_A 157 PLSNANTPAFDGL 169 (549)
T ss_dssp SEEECCCCCCTTG
T ss_pred CCCCCCCCCCCCc
Confidence 6544434444443
No 139
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.15 E-value=1e-11 Score=127.72 Aligned_cols=106 Identities=17% Similarity=0.057 Sum_probs=67.3
Q ss_pred HHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCcccc
Q 039605 184 IMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKAL 263 (352)
Q Consensus 184 L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~ 263 (352)
+.+.+. +.|++++++++++++..+ .+ .+.... +++..++.+|.||+|+|..+.... . ..+
T Consensus 573 l~~~l~-~~GV~i~~~~~V~~i~~~--~~-~v~~~~-----------~~~~~~i~aD~VV~A~G~~p~~~l---~--~~l 632 (690)
T 3k30_A 573 IQRRLI-ENGVARVTDHAVVAVGAG--GV-TVRDTY-----------ASIERELECDAVVMVTARLPREEL---Y--LDL 632 (690)
T ss_dssp HHHHHH-HTTCEEEESEEEEEEETT--EE-EEEETT-----------TCCEEEEECSEEEEESCEEECCHH---H--HHH
T ss_pred HHHHHH-HCCCEEEcCcEEEEEECC--eE-EEEEcc-----------CCeEEEEECCEEEECCCCCCChHH---H--HHH
Confidence 344444 579999999999998643 22 122110 113468999999999996433211 0 000
Q ss_pred ccccccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHHcCCCC
Q 039605 264 DMNTAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPN 325 (352)
Q Consensus 264 ~~~~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~l~~~~ 325 (352)
.. .+ ..+..|++|++||+... + .+..++.+|..||..|..+|.+..
T Consensus 633 ~~-~~-------~~t~~~~VyaiGD~~~~-----~---~~~~A~~~g~~aa~~i~~~l~g~~ 678 (690)
T 3k30_A 633 VA-RR-------DAGEIASVRGIGDAWAP-----G---TIAAAVWSGRRAAEEFDAVLPSND 678 (690)
T ss_dssp HH-HH-------HHTSCSEEEECGGGTSC-----B---CHHHHHHHHHHHHHHTTCCCCCTT
T ss_pred hh-hh-------cccCCCCEEEEeCCCch-----h---hHHHHHHHHHHHHHHHHhhccCCC
Confidence 00 00 04678999999999742 2 234468899999999999987654
No 140
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.14 E-value=9.3e-10 Score=107.87 Aligned_cols=156 Identities=12% Similarity=0.128 Sum_probs=111.4
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
-.++|||+|..|+.+|..|++. |.+|+++|+.+.+.. ...++...+.+
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~-------------------------------~~~~~~~~l~~ 224 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARL-GSKVTVLARNTLFFR-------------------------------EDPAIGEAVTA 224 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCTTTT-------------------------------SCHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCEEEEEEECCccCC-------------------------------CCHHHHHHHHH
Confidence 4799999999999999999999 999999999764310 01344455555
Q ss_pred HHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCccccccc
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDMN 266 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~~ 266 (352)
.+. +.|++++.++++.++..+++.+ .+.+. ..++.+|.||+|+|.++.....+. ...++..+
T Consensus 225 ~l~-~~Gv~i~~~~~v~~i~~~~~~~-~v~~~---------------~~~i~aD~Vv~a~G~~p~~~~l~l-~~~gl~~~ 286 (467)
T 1zk7_A 225 AFR-AEGIEVLEHTQASQVAHMDGEF-VLTTT---------------HGELRADKLLVATGRTPNTRSLAL-DAAGVTVN 286 (467)
T ss_dssp HHH-HTTCEEETTCCEEEEEEETTEE-EEEET---------------TEEEEESEEEECSCEEESCTTSCG-GGGTCCBC
T ss_pred HHH-hCCCEEEcCCEEEEEEEeCCEE-EEEEC---------------CcEEEcCEEEECCCCCcCCCcCCc-hhcCCcCC
Confidence 554 5699999999999998766543 34442 147999999999997654322111 12233333
Q ss_pred -cccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHH
Q 039605 267 -TAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 319 (352)
Q Consensus 267 -~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~ 319 (352)
.+...+.+++++..|++|++||+.... . .+..+..+|+.+|..|+.
T Consensus 287 ~~G~i~vd~~~~t~~~~iya~GD~~~~~----~---~~~~A~~~g~~aa~~i~~ 333 (467)
T 1zk7_A 287 AQGAIVIDQGMRTSNPNIYAAGDCTDQP----Q---FVYVAAAAGTRAAINMTG 333 (467)
T ss_dssp TTSCBCCCTTCBCSSTTEEECSTTBSSC----C---CHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEECCCcccCCCCEEEEeccCCCc----c---cHHHHHHHHHHHHHHHcC
Confidence 455666778888999999999998531 1 233457899999998874
No 141
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.14 E-value=8.8e-11 Score=112.52 Aligned_cols=147 Identities=12% Similarity=0.091 Sum_probs=104.2
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHHH
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMSK 187 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~~ 187 (352)
.|+|||+|..|+.+|..|++. |.+|+|+|+.+.+... . ...+....+.+.
T Consensus 148 ~vvVIGgG~~g~E~A~~l~~~-g~~Vtvv~~~~~~l~~------------------~-----------~~~~~~~~~~~~ 197 (385)
T 3klj_A 148 KAFIIGGGILGIELAQAIIDS-GTPASIGIILEYPLER------------------Q-----------LDRDGGLFLKDK 197 (385)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-TCCEEEECSSSSSCTT------------------T-----------SCHHHHHHHHHH
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCeEEEEEcCCccchh------------------h-----------cCHHHHHHHHHH
Confidence 799999999999999999999 9999999998754210 0 012333444444
Q ss_pred HHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCcccccccc
Q 039605 188 LLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDMNT 267 (352)
Q Consensus 188 ~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~~~ 267 (352)
+. +.|++++.++.+.++ + .++.+|.||+|+|..+.... ....++..+.
T Consensus 198 l~-~~gV~~~~~~~v~~i--------------g--------------~~~~~D~vv~a~G~~p~~~~---~~~~gl~~~~ 245 (385)
T 3klj_A 198 LD-RLGIKIYTNSNFEEM--------------G--------------DLIRSSCVITAVGVKPNLDF---IKDTEIASKR 245 (385)
T ss_dssp HH-TTTCEEECSCCGGGC--------------H--------------HHHHHSEEEECCCEEECCGG---GTTSCCCBSS
T ss_pred HH-hCCCEEEeCCEEEEc--------------C--------------eEEecCeEEECcCcccChhh---hhhcCCCcCC
Confidence 44 679999999776655 1 36789999999997544322 2222344455
Q ss_pred ccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHH
Q 039605 268 AEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKS 320 (352)
Q Consensus 268 g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~ 320 (352)
+ ..+.+++++..|++|++||+....+. . ...+..+..+|+.||..++..
T Consensus 246 g-i~vd~~~~t~~~~IyA~GD~a~~~~~--~-~~~~~~A~~qg~~aa~~i~g~ 294 (385)
T 3klj_A 246 G-ILVNDHMETSIKDIYACGDVAEFYGK--N-PGLINIANKQGEVAGLNACGE 294 (385)
T ss_dssp S-EEECTTCBCSSTTEEECGGGEEETTB--C-CCCHHHHHHHHHHHHHHHTTC
T ss_pred C-EEECCCcccCCCCEEEEEeeEecCCC--c-ccHHHHHHHHHHHHHHHhcCC
Confidence 5 56667888999999999999864321 1 123556788999999999853
No 142
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.13 E-value=6e-10 Score=112.09 Aligned_cols=63 Identities=16% Similarity=0.165 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 178 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 178 ~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
..+...+.+.+. +.|++++++++|+++..+++++++|.+.+. .+ ++..+++|+.||+|+|.|+
T Consensus 188 ~~l~~~l~~~a~-~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~------~t---g~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 188 ARLVIDNIKKAA-EDGAYLVSKMKAVGFLYEGDQIVGVKARDL------LT---DEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp HHHHHHHHHHHH-HTTCEEESSEEEEEEEEETTEEEEEEEEET------TT---CCEEEEEBSCEEECCGGGH
T ss_pred HHHHHHHHHHHH-HcCCeEEeccEEEEEEEeCCEEEEEEEEEc------CC---CCEEEEEcCEEEECCChhH
Confidence 445566666665 579999999999999999889888887431 11 1235799999999999886
No 143
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.13 E-value=3.7e-10 Score=118.55 Aligned_cols=128 Identities=23% Similarity=0.317 Sum_probs=89.0
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCC-cEEEEeccCCC--CCCc----ceeec---------------------------
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNV-QVAIIEQSVSP--GGAS----GSVVR--------------------------- 151 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~-kV~viEk~~~~--GG~~----~~~~~--------------------------- 151 (352)
++||+|||||++|+++|++|+++ |. +|+|||++... +|+. .....
T Consensus 4 ~~dVvIIGgGi~Gls~A~~La~~-G~~~V~vlE~~~~~~~~gss~~~~G~~~~~~~~~~~~~l~~~s~~~~~~l~~~~~~ 82 (830)
T 1pj5_A 4 TPRIVIIGAGIVGTNLADELVTR-GWNNITVLDQGPLNMPGGSTSHAPGLVFQTNPSKTMASFAKYTVEKLLSLTEDGVS 82 (830)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-TCCCEEEECSSCTTCCCSGGGTCCCEECCCCSCHHHHHHHHHHHHHHHHCEETTEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhC-CCCcEEEEeCCCCCCCcccceeCCceeecCCCCHHHHHHHHHHHHHHHHHHhhCCC
Confidence 57999999999999999999999 98 99999998753 2321 00000
Q ss_pred ------------ch--------HHHHHHHcCCccccC------------------CCe----EEEechHHHHHHHHHHHH
Q 039605 152 ------------KP--------AHLFLDELGIDYDEQ------------------DNY----VVIKHAALFTSTIMSKLL 189 (352)
Q Consensus 152 ------------~~--------~~~~l~~~Gi~~~~~------------------~~~----~~~~~~~~~~~~L~~~~~ 189 (352)
.+ ..+++..+|+++... ..+ ....+...+...|.+.+.
T Consensus 83 ~~~~~G~l~~~~~~~~~~~l~~~~~~~~~~G~~~~~l~~~e~~~~~p~l~~~~~~gg~~~~~~g~v~p~~l~~~L~~~a~ 162 (830)
T 1pj5_A 83 CFNQVGGLEVATTETRLADLKRKLGYAAAWGIEGRLLSPAECQELYPLLDGENILGGLHVPSDGLASAARAVQLLIKRTE 162 (830)
T ss_dssp SEECCCEEEEESSHHHHHHHHHHHHHHHHHTCCCEEECHHHHHHHCTTSCGGGCCEEEEETTCEEECHHHHHHHHHHHHH
T ss_pred CeeecCcEEEEeCHHHHHHHHHHHHHHHHcCCCeEEECHHHHHHhCccCCccceEEEEEECCCceEcHHHHHHHHHHHHH
Confidence 00 012233444432210 000 012245567778777776
Q ss_pred cCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 190 ARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 190 ~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
+.|++++++++|+++..++++++++.+.+ .+++||.||+|+|.++
T Consensus 163 -~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~---------------G~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 163 -SAGVTYRGSTTVTGIEQSGGRVTGVQTAD---------------GVIPADIVVSCAGFWG 207 (830)
T ss_dssp -HTTCEEECSCCEEEEEEETTEEEEEEETT---------------EEEECSEEEECCGGGH
T ss_pred -HcCCEEECCceEEEEEEeCCEEEEEEECC---------------cEEECCEEEECCccch
Confidence 46999999999999999888888887743 3799999999999876
No 144
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.12 E-value=4.3e-10 Score=107.34 Aligned_cols=124 Identities=15% Similarity=0.078 Sum_probs=80.3
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCC---CcceeecchHHHHHHHcCCccc------------------
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGG---ASGSVVRKPAHLFLDELGIDYD------------------ 166 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG---~~~~~~~~~~~~~l~~~Gi~~~------------------ 166 (352)
+|+||||||+||++|+.|+++ |++|+|+||.+.+.. +....+.....+.|+++|+...
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~-G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~ 81 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKH-GIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFY 81 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEE
T ss_pred EEEEECcCHHHHHHHHHHHhC-CCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEe
Confidence 699999999999999999999 999999999765432 2233444555566665554210
Q ss_pred -cCCCe------------------EEEechHHHHHHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCC
Q 039605 167 -EQDNY------------------VVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHD 227 (352)
Q Consensus 167 -~~~~~------------------~~~~~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~ 227 (352)
..... ....+..++.+.|. +..+..++++++++++...++..+.+.+.+|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~----~~~~~~v~~~~~v~~~~~~~~~~v~v~~~dG------- 150 (412)
T 4hb9_A 82 NERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILN----KGLANTIQWNKTFVRYEHIENGGIKIFFADG------- 150 (412)
T ss_dssp CTTSCEEEC--------------CEEEEEHHHHHHHHH----TTCTTTEECSCCEEEEEECTTSCEEEEETTS-------
T ss_pred cCCcceecccCCccccccccccccceEeeHHHHHHHHH----hhccceEEEEEEEEeeeEcCCCeEEEEECCC-------
Confidence 00000 01112233333333 3344568899999999876543223555432
Q ss_pred CCCCCCCeEEEeCEEEEccCCCC
Q 039605 228 SQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 228 ~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
.+++||+||.|+|.+|
T Consensus 151 -------~~~~adlvVgADG~~S 166 (412)
T 4hb9_A 151 -------SHENVDVLVGADGSNS 166 (412)
T ss_dssp -------CEEEESEEEECCCTTC
T ss_pred -------CEEEeeEEEECCCCCc
Confidence 5799999999999887
No 145
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.11 E-value=1.7e-10 Score=109.79 Aligned_cols=152 Identities=18% Similarity=0.163 Sum_probs=106.3
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHHH
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMSK 187 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~~ 187 (352)
.++|||+|..|+.+|..|++. |.+|+++|+.+.+.. + ..++.+.+.+.
T Consensus 145 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~--------------------~-----------~~~~~~~l~~~ 192 (367)
T 1xhc_A 145 EAIIIGGGFIGLELAGNLAEA-GYHVKLIHRGAMFLG--------------------L-----------DEELSNMIKDM 192 (367)
T ss_dssp EEEEEECSHHHHHHHHHHHHT-TCEEEEECSSSCCTT--------------------C-----------CHHHHHHHHHH
T ss_pred cEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCCeecc--------------------C-----------CHHHHHHHHHH
Confidence 799999999999999999999 999999999865421 0 12333444555
Q ss_pred HHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCcccccccc
Q 039605 188 LLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDMNT 267 (352)
Q Consensus 188 ~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~~~ 267 (352)
+. +.|+++++++++.++. .+ ++.+.++ . +.+|.||+|+|..+.... ....++..+.
T Consensus 193 l~-~~gV~i~~~~~v~~i~--~~---~v~~~~g--------------~-i~~D~vi~a~G~~p~~~l---l~~~gl~~~~ 248 (367)
T 1xhc_A 193 LE-ETGVKFFLNSELLEAN--EE---GVLTNSG--------------F-IEGKVKICAIGIVPNVDL---ARRSGIHTGR 248 (367)
T ss_dssp HH-HTTEEEECSCCEEEEC--SS---EEEETTE--------------E-EECSCEEEECCEEECCHH---HHHTTCCBSS
T ss_pred HH-HCCCEEEcCCEEEEEE--ee---EEEECCC--------------E-EEcCEEEECcCCCcCHHH---HHhCCCCCCC
Confidence 54 5699999999999886 22 3444332 4 999999999997554321 1112233333
Q ss_pred ccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHH
Q 039605 268 AEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 319 (352)
Q Consensus 268 g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~ 319 (352)
+ ..+.+++++..|++|++||+..... .....+..+..+|+.||..|..
T Consensus 249 g-i~Vd~~~~t~~~~IyA~GD~a~~~~---~~~~~~~~A~~qg~~aa~~i~g 296 (367)
T 1xhc_A 249 G-ILIDDNFRTSAKDVYAIGDCAEYSG---IIAGTAKAAMEQARVLADILKG 296 (367)
T ss_dssp S-EECCTTSBCSSTTEEECGGGEEBTT---BCCCSHHHHHHHHHHHHHHHTT
T ss_pred C-EEECCCcccCCCCEEEeEeeeecCC---CCccHHHHHHHHHHHHHHHhcC
Confidence 4 4556778889999999999985321 1112455668899999999874
No 146
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.11 E-value=5.8e-10 Score=110.22 Aligned_cols=164 Identities=15% Similarity=0.149 Sum_probs=111.2
Q ss_pred ccEEEECCcHHHHHHHHHHhc----CCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISK----NPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTS 182 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~----~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~ 182 (352)
-.|+|||+|..|+.+|..|++ . |.+|+++++.+..... .+ ...+..
T Consensus 181 ~~vvViGgG~iG~E~A~~l~~~~~~~-g~~V~~v~~~~~~~~~------------------------~l-----~~~~~~ 230 (493)
T 1m6i_A 181 KSITIIGGGFLGSELACALGRKARAL-GTEVIQLFPEKGNMGK------------------------IL-----PEYLSN 230 (493)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHHHH-TCEEEEECSSSSTTTT------------------------TS-----CHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhhhhhc-CCEEEEEecCcccccc------------------------cC-----CHHHHH
Confidence 379999999999999999986 4 7889999986532110 00 123334
Q ss_pred HHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCccc
Q 039605 183 TIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKA 262 (352)
Q Consensus 183 ~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~ 262 (352)
.+.+.+. +.|+++++++.+.++..+++++ .+.+.+ ..++.+|.||+|+|..+.... ....+
T Consensus 231 ~~~~~l~-~~GV~v~~~~~V~~i~~~~~~~-~v~l~d--------------G~~i~aD~Vv~a~G~~pn~~l---~~~~g 291 (493)
T 1m6i_A 231 WTMEKVR-REGVKVMPNAIVQSVGVSSGKL-LIKLKD--------------GRKVETDHIVAAVGLEPNVEL---AKTGG 291 (493)
T ss_dssp HHHHHHH-TTTCEEECSCCEEEEEEETTEE-EEEETT--------------SCEEEESEEEECCCEEECCTT---HHHHT
T ss_pred HHHHHHH-hcCCEEEeCCEEEEEEecCCeE-EEEECC--------------CCEEECCEEEECCCCCccHHH---HHHcC
Confidence 4444444 6799999999999998776655 465543 258999999999997654322 11122
Q ss_pred cccc--cccceeecccccccCceeEecchhhhhcCC--CCCCcchhhhhhchHHHHHHHHHH
Q 039605 263 LDMN--TAEDAIVKLTREIVPGMIVAGMEVAEIDGA--PRMGPTFGAMMISGQKAAHLALKS 320 (352)
Q Consensus 263 ~~~~--~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~--~r~g~~~~~~~~sG~~aA~~i~~~ 320 (352)
+..+ .+.+.+.+++++ .|++|++||++...+.. .+....+..++.+|+.||..++..
T Consensus 292 l~~~~~~ggi~Vd~~l~t-~~~IyA~GD~a~~~~~~~g~~~~~~~~~A~~qg~~aa~ni~g~ 352 (493)
T 1m6i_A 292 LEIDSDFGGFRVNAELQA-RSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGA 352 (493)
T ss_dssp CCBCTTTCSEECCTTCEE-ETTEEECGGGEEEEETTTEEECCCCHHHHHHHHHHHHHHHTSC
T ss_pred CccccCCCcEEECCCccc-CCCeeEeeeeEeccCcccCccccchHHHHHHHHHHHHHHhcCC
Confidence 3333 245555666776 69999999998654211 123345556789999999998754
No 147
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.11 E-value=3.5e-10 Score=110.75 Aligned_cols=158 Identities=19% Similarity=0.125 Sum_probs=106.9
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
-.++|||||..|+.+|..|++. |.+|+|+|+.+.+... ...++...+.+
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~~------------------------------~~~~~~~~l~~ 220 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKL-GAQVSVVEARERILPT------------------------------YDSELTAPVAE 220 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSSSSSTT------------------------------SCHHHHHHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHHC-CCeEEEEEcCCccccc------------------------------cCHHHHHHHHH
Confidence 4799999999999999999999 9999999998754210 01233344444
Q ss_pred HHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCccccccc
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDMN 266 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~~ 266 (352)
.+. +.|+++++++.+.++.. +++ .+...+ |+..++.+|.||+|+|..+.....+. ...++..+
T Consensus 221 ~l~-~~gv~i~~~~~v~~i~~--~~v-~v~~~~------------G~~~~i~~D~vv~a~G~~p~~~~l~~-~~~g~~~~ 283 (458)
T 1lvl_A 221 SLK-KLGIALHLGHSVEGYEN--GCL-LANDGK------------GGQLRLEADRVLVAVGRRPRTKGFNL-ECLDLKMN 283 (458)
T ss_dssp HHH-HHTCEEETTCEEEEEET--TEE-EEECSS------------SCCCEECCSCEEECCCEEECCSSSSG-GGSCCCEE
T ss_pred HHH-HCCCEEEECCEEEEEEe--CCE-EEEECC------------CceEEEECCEEEECcCCCcCCCCCCc-HhcCCccc
Confidence 444 56999999999999875 332 222111 12368999999999997654322111 11123222
Q ss_pred cccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHH
Q 039605 267 TAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 319 (352)
Q Consensus 267 ~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~ 319 (352)
...+.+.+++++..|++|++||+.... .....+..+|+.+|..+..
T Consensus 284 ~~~i~vd~~~~t~~~~Iya~GD~~~~~-------~~~~~A~~~g~~aa~~i~g 329 (458)
T 1lvl_A 284 GAAIAIDERCQTSMHNVWAIGDVAGEP-------MLAHRAMAQGEMVAEIIAG 329 (458)
T ss_dssp TTEECCCTTCBCSSTTEEECGGGGCSS-------CCHHHHHHHHHHHHHHHTT
T ss_pred CCEEeECCCCcCCCCCEEEeeccCCCc-------ccHHHHHHHHHHHHHHhcC
Confidence 213455577888899999999998531 1234557889999999874
No 148
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.11 E-value=2.6e-10 Score=111.26 Aligned_cols=162 Identities=18% Similarity=0.110 Sum_probs=110.9
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
-.++|||+|..|+.+|..|++. |.+|+++++.+.+... . ...++...+.+
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~~------------------~-----------~~~~~~~~l~~ 198 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQ-GKNVTMIVRGERVLRR------------------S-----------FDKEVTDILEE 198 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSTTTT------------------T-----------SCHHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CCeEEEEEcCCccchh------------------h-----------cCHHHHHHHHH
Confidence 4799999999999999999999 9999999998654210 0 01344445555
Q ss_pred HHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCccccccc
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDMN 266 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~~ 266 (352)
.+. +. ++++.++.+.++..++ ++..+.. + ..++.+|.||+|+|..+.... ....++..+
T Consensus 199 ~l~-~~-v~i~~~~~v~~i~~~~-~v~~v~~-~--------------g~~i~~D~Vv~a~G~~p~~~l---~~~~gl~~~ 257 (449)
T 3kd9_A 199 KLK-KH-VNLRLQEITMKIEGEE-RVEKVVT-D--------------AGEYKAELVILATGIKPNIEL---AKQLGVRIG 257 (449)
T ss_dssp HHT-TT-SEEEESCCEEEEECSS-SCCEEEE-T--------------TEEEECSEEEECSCEEECCHH---HHHTTCCBC
T ss_pred HHH-hC-cEEEeCCeEEEEeccC-cEEEEEe-C--------------CCEEECCEEEEeeCCccCHHH---HHhCCccCC
Confidence 554 55 9999999999887544 4433333 1 258999999999997543211 111123322
Q ss_pred -cccceeecccccccCceeEecchhhhhc---CCCCCCcchhhhhhchHHHHHHHHH
Q 039605 267 -TAEDAIVKLTREIVPGMIVAGMEVAEID---GAPRMGPTFGAMMISGQKAAHLALK 319 (352)
Q Consensus 267 -~g~~~vv~~~~~~~pg~~~aG~~~~~~~---g~~r~g~~~~~~~~sG~~aA~~i~~ 319 (352)
.|.+.+.+++++..|++|++||+....+ |.+..-..+..+..+|+.+|..+..
T Consensus 258 ~~G~i~vd~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~~i~g 314 (449)
T 3kd9_A 258 ETGAIWTNEKMQTSVENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIAG 314 (449)
T ss_dssp TTSSBCCCTTCBCSSTTEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEECCCCccCCCCEEEeeeeeeeccccCCceEEeccHHHHHHHHHHHHHHhcC
Confidence 3556667788899999999999986432 2222223455668899999998874
No 149
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.11 E-value=4e-10 Score=110.56 Aligned_cols=142 Identities=15% Similarity=0.167 Sum_probs=84.7
Q ss_pred ccEEEECCcHHHHHHHHHHhc---CCCCc---EEEEeccCCCCCCcceeecch-----------HH---------HHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISK---NPNVQ---VAIIEQSVSPGGASGSVVRKP-----------AH---------LFLDE 160 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~---~~G~k---V~viEk~~~~GG~~~~~~~~~-----------~~---------~~l~~ 160 (352)
+||+|||||++|+++|..|++ . |++ |+|||+.+.+||.+....... .. ..+.-
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~-G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~ 81 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEK-GAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEF 81 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHT-TCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCB
T ss_pred CcEEEECccHHHHHHHHHHHhhhhc-CCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhccc
Confidence 599999999999999999999 8 999 999999988887644311000 00 00000
Q ss_pred cCCccccC--CCeEEEechHHHHHHHHHHHHcCCCcE--EEccceeEEEEEeCC--EEEEEEEcccceeccCCCCCCCCC
Q 039605 161 LGIDYDEQ--DNYVVIKHAALFTSTIMSKLLARPNVK--LFNAVAAEDLIVKGN--RVGGIVTNWALVSMNHDSQSCMDP 234 (352)
Q Consensus 161 ~Gi~~~~~--~~~~~~~~~~~~~~~L~~~~~~~~gv~--i~~~t~v~~l~~~~g--~v~gv~~~~g~~~~~~~~~~~g~~ 234 (352)
.++++... ..........++.+.+.+.+. +.|++ ++++++|+.+..+++ ++ .|.+.++ .+++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~gv~~~i~~~~~V~~v~~~~~~~~~-~V~~~~~---------~~g~~ 150 (464)
T 2xve_A 82 ADYTFDEHFGKPIASYPPREVLWDYIKGRVE-KAGVRKYIRFNTAVRHVEFNEDSQTF-TVTVQDH---------TTDTI 150 (464)
T ss_dssp TTBCHHHHHSSCCCSSCBHHHHHHHHHHHHH-HHTCGGGEECSEEEEEEEEETTTTEE-EEEEEET---------TTTEE
T ss_pred CCCCCCcccCCCCCCCCCHHHHHHHHHHHHH-HcCCcceEEeCCEEEEEEEcCCCCcE-EEEEEEc---------CCCce
Confidence 00000000 000001233455555554444 44777 889999999988765 33 3444321 01123
Q ss_pred eEEEeCEEEEccCCCCCCCCCCCCCc
Q 039605 235 NVMEAKVVVSSCGHDGPFGATGVRGM 260 (352)
Q Consensus 235 ~~i~A~~VIlAtG~~~~~~~~g~~g~ 260 (352)
.++.+|.||+|||.++.+..+.++|.
T Consensus 151 ~~~~~d~VVvAtG~~s~p~~p~ipG~ 176 (464)
T 2xve_A 151 YSEEFDYVVCCTGHFSTPYVPEFEGF 176 (464)
T ss_dssp EEEEESEEEECCCSSSSBCCCCCBTT
T ss_pred EEEEcCEEEECCCCCCCCccCCCCCc
Confidence 67999999999997665444444443
No 150
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.11 E-value=4.8e-10 Score=105.16 Aligned_cols=122 Identities=13% Similarity=0.236 Sum_probs=77.3
Q ss_pred ccEEEECCcHHHHHHHHHHhc---CCCCcEEEEeccCCCCCCcceee------------------cc----hHHHH---H
Q 039605 107 TDVVVVGAGSAGLSCAYEISK---NPNVQVAIIEQSVSPGGASGSVV------------------RK----PAHLF---L 158 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~---~~G~kV~viEk~~~~GG~~~~~~------------------~~----~~~~~---l 158 (352)
+||+|||||++|+++|+.|++ . |++|+||||....||...... .. ....+ +
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~-G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~ 80 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSG-PLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDEL 80 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-C-CEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccC-CceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHH
Confidence 489999999999999999999 8 999999999987776421110 00 11122 2
Q ss_pred HHcCCccccCCC------------eEEEechHHHHHHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccC
Q 039605 159 DELGIDYDEQDN------------YVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNH 226 (352)
Q Consensus 159 ~~~Gi~~~~~~~------------~~~~~~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~ 226 (352)
...|+...+... |........+.+.+.+ +.|++++++++|+++..+++++. +.+.++
T Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~----~~g~~i~~~~~V~~i~~~~~~~~-v~~~~g------ 149 (342)
T 3qj4_A 81 LAYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLK----ESGAEVYFRHRVTQINLRDDKWE-VSKQTG------ 149 (342)
T ss_dssp HHTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHH----HHTCEEESSCCEEEEEECSSSEE-EEESSS------
T ss_pred HhCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHH----hcCCEEEeCCEEEEEEEcCCEEE-EEECCC------
Confidence 223432222110 1001111233333333 33899999999999998877654 554321
Q ss_pred CCCCCCCCeEEEeCEEEEccCC
Q 039605 227 DSQSCMDPNVMEAKVVVSSCGH 248 (352)
Q Consensus 227 ~~~~~g~~~~i~A~~VIlAtG~ 248 (352)
.++.+|.||+|+..
T Consensus 150 --------~~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 150 --------SPEQFDLIVLTMPV 163 (342)
T ss_dssp --------CCEEESEEEECSCH
T ss_pred --------CEEEcCEEEECCCH
Confidence 35899999999984
No 151
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.11 E-value=3.1e-10 Score=110.47 Aligned_cols=34 Identities=35% Similarity=0.518 Sum_probs=32.1
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCC-CcEEEEecc
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPN-VQVAIIEQS 139 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G-~kV~viEk~ 139 (352)
.++||||||||++|+++|+.|+++ | ++|+|||+.
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~-G~~~V~vlE~~ 56 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVW-SGGSVLVVDAG 56 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHH-HCSCEEEEESS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhC-CCCcEEEEccC
Confidence 478999999999999999999999 9 999999993
No 152
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.11 E-value=6e-10 Score=102.71 Aligned_cols=112 Identities=21% Similarity=0.272 Sum_probs=75.9
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCC-cEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNV-QVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIM 185 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~-kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~ 185 (352)
|||+|||||++|+++|+.|++. |+ +|+|||+. ..||.+...... .....+.......++...+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~-g~~~v~lie~~-~~gg~~~~~~~~-------------~~~~~~~~~~~~~~~~~~l~ 66 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRG-GVKNAVLFEKG-MPGGQITGSSEI-------------ENYPGVKEVVSGLDFMQPWQ 66 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT-TCSSEEEECSS-STTCGGGGCSCB-------------CCSTTCCSCBCHHHHHHHHH
T ss_pred ceEEEECccHHHHHHHHHHHHC-CCCcEEEEcCC-CCCccccccccc-------------ccCCCCcccCCHHHHHHHHH
Confidence 6999999999999999999999 99 99999996 455542211000 00000100123455556665
Q ss_pred HHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 186 SKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 186 ~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
+.+. +.|+++++ .++.++..+++.+. +.+.+ ..++++|.||+|+|..+
T Consensus 67 ~~~~-~~~v~~~~-~~v~~i~~~~~~~~-v~~~~--------------g~~~~~~~vv~AtG~~~ 114 (311)
T 2q0l_A 67 EQCF-RFGLKHEM-TAVQRVSKKDSHFV-ILAED--------------GKTFEAKSVIIATGGSP 114 (311)
T ss_dssp HHHH-TTSCEEEC-SCEEEEEEETTEEE-EEETT--------------SCEEEEEEEEECCCEEE
T ss_pred HHHH-HcCCEEEE-EEEEEEEEcCCEEE-EEEcC--------------CCEEECCEEEECCCCCC
Confidence 5555 56999988 68999988776442 33322 24799999999999754
No 153
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.09 E-value=1.3e-09 Score=106.93 Aligned_cols=159 Identities=18% Similarity=0.164 Sum_probs=110.0
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
-.++|||+|..|+.+|..|++. |.+|+++++.+..... + ...++.+.+.+
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtlv~~~~~~l~~-------------------~----------~d~~~~~~l~~ 222 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLM-GVQTHIIEMLDRALIT-------------------L----------EDQDIVNTLLS 222 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSCTT-------------------S----------CCHHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCEEEEEEeCCcCCCC-------------------C----------CCHHHHHHHHh
Confidence 4799999999999999999999 9999999997643210 0 01333344333
Q ss_pred HHHcCCCcEEEccceeEEEEEeC-CEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCcccccc
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKG-NRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDM 265 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~-g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~ 265 (352)
.+. ++++.++.+.++..++ +++. +.+.+ .+|+..++.+|.||+|+|..+... .+ ....++..
T Consensus 223 ~l~----v~i~~~~~v~~i~~~~~~~v~-v~~~~----------~~G~~~~i~~D~vi~a~G~~p~~~-l~-l~~~gl~~ 285 (466)
T 3l8k_A 223 ILK----LNIKFNSPVTEVKKIKDDEYE-VIYST----------KDGSKKSIFTNSVVLAAGRRPVIP-EG-AREIGLSI 285 (466)
T ss_dssp HHC----CCEECSCCEEEEEEEETTEEE-EEECC----------TTSCCEEEEESCEEECCCEEECCC-TT-TGGGTCCB
T ss_pred cCE----EEEEECCEEEEEEEcCCCcEE-EEEEe----------cCCceEEEEcCEEEECcCCCcccc-cc-hhhcCcee
Confidence 332 9999999999998876 6653 44431 012346899999999999765432 11 11223333
Q ss_pred c-cccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHH
Q 039605 266 N-TAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKS 320 (352)
Q Consensus 266 ~-~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~ 320 (352)
+ .| ..+.+++++..|++|++||+... + .....+..+|+.||..|+..
T Consensus 286 ~~~G-i~vd~~~~t~~~~Iya~GD~~~~----~---~~~~~A~~~g~~aa~~i~~~ 333 (466)
T 3l8k_A 286 SKTG-IVVDETMKTNIPNVFATGDANGL----A---PYYHAAVRMSIAAANNIMAN 333 (466)
T ss_dssp CSSS-BCCCTTCBCSSTTEEECGGGTCS----C---CSHHHHHHHHHHHHHHHHTT
T ss_pred CCCC-EeECCCccCCCCCEEEEEecCCC----C---ccHhHHHHHHHHHHHHHhCC
Confidence 3 45 66678888999999999999853 1 22445678999999999853
No 154
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.09 E-value=3.4e-10 Score=105.24 Aligned_cols=114 Identities=20% Similarity=0.230 Sum_probs=74.8
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHH
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIM 185 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~ 185 (352)
.+||+|||||++|+++|+.|++. |++|+|||+. .+||.+........ ..+++. .....++...+.
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~-g~~v~lie~~-~~gg~~~~~~~~~~-----~~~~~~--------~~~~~~~~~~l~ 72 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRA-QLSTLILEKG-MPGGQIAWSEEVEN-----FPGFPE--------PIAGMELAQRMH 72 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESS-CTTGGGGGCSCBCC-----STTCSS--------CBCHHHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHc-CCcEEEEeCC-CCCccccccccccc-----CCCCCC--------CCCHHHHHHHHH
Confidence 58999999999999999999999 9999999998 56664322100000 001100 112345555555
Q ss_pred HHHHcCCCcEEEccceeEEEEEe--CCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 186 SKLLARPNVKLFNAVAAEDLIVK--GNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 186 ~~~~~~~gv~i~~~t~v~~l~~~--~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
+.+. +.|+++++ .++.++..+ ++..+.+.+.+ ..++.+|.||+|||..+
T Consensus 73 ~~~~-~~gv~~~~-~~v~~i~~~~~~~~~~~v~~~~--------------g~~~~~~~vv~AtG~~~ 123 (325)
T 2q7v_A 73 QQAE-KFGAKVEM-DEVQGVQHDATSHPYPFTVRGY--------------NGEYRAKAVILATGADP 123 (325)
T ss_dssp HHHH-HTTCEEEE-CCEEEEEECTTSSSCCEEEEES--------------SCEEEEEEEEECCCEEE
T ss_pred HHHH-HcCCEEEe-eeEEEEEeccCCCceEEEEECC--------------CCEEEeCEEEECcCCCc
Confidence 5555 56899987 588888776 33211233322 25799999999999754
No 155
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.07 E-value=3.1e-10 Score=109.20 Aligned_cols=117 Identities=15% Similarity=0.076 Sum_probs=75.9
Q ss_pred HHHHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCC
Q 039605 180 FTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRG 259 (352)
Q Consensus 180 ~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g 259 (352)
+...+.+.+. +.||++++++.++++.. + ++.+.+ ..++.+|.||+|+|..++... ..
T Consensus 220 ~~~~~~~~l~-~~gV~~~~~~~v~~i~~--~---~v~~~~--------------g~~~~~D~vi~a~G~~~~~~l---~~ 276 (409)
T 3h8l_A 220 SRKAVASIYN-QLGIKLVHNFKIKEIRE--H---EIVDEK--------------GNTIPADITILLPPYTGNPAL---KN 276 (409)
T ss_dssp HHHHHHHHHH-HHTCEEECSCCEEEECS--S---EEEETT--------------SCEEECSEEEEECCEECCHHH---HT
T ss_pred HHHHHHHHHH-HCCCEEEcCCceEEECC--C---eEEECC--------------CCEEeeeEEEECCCCCccHHH---Hh
Confidence 3344444443 56899999988888753 2 244433 258999999999997654211 11
Q ss_pred c-cccccccccceeeccccc-ccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHHcCCC
Q 039605 260 M-KALDMNTAEDAIVKLTRE-IVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQP 324 (352)
Q Consensus 260 ~-~~~~~~~g~~~vv~~~~~-~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~l~~~ 324 (352)
. ..+....|...+.+..++ ..|++|++||+... +.++ ....+..+|..+|..|..+|...
T Consensus 277 ~~~~l~~~~G~i~vd~~~~~~~~~~vfa~GD~~~~--~~~~---~~~~A~~q~~~aa~~i~~~l~~~ 338 (409)
T 3h8l_A 277 STPDLVDDGGFIPTDLNMVSIKYDNVYAVGDANSM--TVPK---LGYLAVMTGRIAAQHLANRLGVP 338 (409)
T ss_dssp SCGGGSCTTSCBCBBTTSBBSSCTTEEECGGGBTT--CCSC---CHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ccccCcCCCCCEEeCcccccCCCCCEEEeehhccC--CCCc---HHHHHHHHHHHHHHHHHHHhcCC
Confidence 1 112223455556666676 78999999999863 2222 23345789999999999999443
No 156
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.06 E-value=6.9e-10 Score=113.59 Aligned_cols=103 Identities=21% Similarity=0.325 Sum_probs=72.5
Q ss_pred CccEEEECCcHHHHHHHHHHhc-----CCCCcEEEEeccCCCC-CCcceeecchHHHHHHHcCCccc-------------
Q 039605 106 DTDVVVVGAGSAGLSCAYEISK-----NPNVQVAIIEQSVSPG-GASGSVVRKPAHLFLDELGIDYD------------- 166 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~-----~~G~kV~viEk~~~~G-G~~~~~~~~~~~~~l~~~Gi~~~------------- 166 (352)
++||+||||||+||++|+.|++ . |++|+||||.+... .+....+.....+.|+++|+.-.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~-Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~lGl~~~l~~~~~~~~~~~~ 86 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKP-DLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKILSEANDMSTIAL 86 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHST-TCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHHHHHTTCBCCCEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccC-CCCEEEEeCCCCCCCCCceeEEChHHHHHHHHCCCHHHHHHhccccceEEE
Confidence 5799999999999999999999 9 99999999986543 22344556666777777765210
Q ss_pred --cC--CCe-----------------EEEechHHHHHHHHHHHHcCC--CcEEEccceeEEEEEeC
Q 039605 167 --EQ--DNY-----------------VVIKHAALFTSTIMSKLLARP--NVKLFNAVAAEDLIVKG 209 (352)
Q Consensus 167 --~~--~~~-----------------~~~~~~~~~~~~L~~~~~~~~--gv~i~~~t~v~~l~~~~ 209 (352)
.. +.+ ....+...+.+.|++.+.+.. ++++.++++++++..++
T Consensus 87 ~~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~ 152 (665)
T 1pn0_A 87 YNPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDS 152 (665)
T ss_dssp EEECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECG
T ss_pred EeCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecC
Confidence 00 000 112334556677777776432 48999999999998875
No 157
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.06 E-value=8.8e-10 Score=103.97 Aligned_cols=127 Identities=14% Similarity=0.201 Sum_probs=77.2
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCC-cEEEEeccCCCCCCcceee-----cchHHHHHHHcCCc-cccC-CCe------
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNV-QVAIIEQSVSPGGASGSVV-----RKPAHLFLDELGID-YDEQ-DNY------ 171 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~-kV~viEk~~~~GG~~~~~~-----~~~~~~~l~~~Gi~-~~~~-~~~------ 171 (352)
++||+|||||++|+++|+.|++. |+ +|+|||+.. +||.+.... ..+. .....+|+. +... ...
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~-g~~~v~lie~~~-~Gg~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~ 80 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDF-GITDVIILEKGT-VGHSFKHWPKSTRTITPS-FTSNGFGMPDMNAISMDTSPAFTF 80 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCCEEEECSSS-TTHHHHTSCTTCBCSSCC-CCCGGGTCCCTTCSSTTCCHHHHH
T ss_pred cCcEEEECcCHHHHHHHHHHHHc-CCCcEEEEecCC-CCCccccCcccccccCcc-hhcccCCchhhhhccccccccccc
Confidence 57999999999999999999999 99 999999987 665321100 0000 000112220 0000 000
Q ss_pred -EEEechHHHHHHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 172 -VVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 172 -~~~~~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
.......++...+.+.+. +.|++++++++|.++..+++.+ .+.+.+ .++.+|.||+|+|.++
T Consensus 81 ~~~~~~~~~~~~~l~~~~~-~~gv~i~~~~~v~~i~~~~~~~-~v~~~~---------------g~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 81 NEEHISGETYAEYLQVVAN-HYELNIFENTVVTNISADDAYY-TIATTT---------------ETYHADYIFVATGDYN 143 (369)
T ss_dssp CCSSCBHHHHHHHHHHHHH-HTTCEEECSCCEEEEEECSSSE-EEEESS---------------CCEEEEEEEECCCSTT
T ss_pred cccCCCHHHHHHHHHHHHH-HcCCeEEeCCEEEEEEECCCeE-EEEeCC---------------CEEEeCEEEECCCCCC
Confidence 000122344444444443 5689999999999998765443 233321 2589999999999876
Q ss_pred CC
Q 039605 251 PF 252 (352)
Q Consensus 251 ~~ 252 (352)
.+
T Consensus 144 ~p 145 (369)
T 3d1c_A 144 FP 145 (369)
T ss_dssp SB
T ss_pred cc
Confidence 43
No 158
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.05 E-value=6.7e-10 Score=108.00 Aligned_cols=129 Identities=15% Similarity=0.100 Sum_probs=78.2
Q ss_pred HHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCccccccc
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDMN 266 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~~ 266 (352)
+..++.||+++.++.++++.. +++. +.+ ++ .++..++..++.+|.+|+|+|..++....... ++...
T Consensus 216 ~~l~~~gI~~~~~~~v~~v~~--~~v~---~~~----~~-~~g~~~~~~~i~~D~vv~~~g~~~~~~~~~~~---gl~~~ 282 (437)
T 3sx6_A 216 KGLKEEGIEAYTNCKVTKVED--NKMY---VTQ----VD-EKGETIKEMVLPVKFGMMIPAFKGVPAVAGVE---GLCNP 282 (437)
T ss_dssp HHHHHTTCEEECSEEEEEEET--TEEE---EEE----EC-TTSCEEEEEEEECSEEEEECCEECCHHHHTST---TTBCT
T ss_pred HHHHHCCCEEEcCCEEEEEEC--CeEE---EEe----cc-cCCccccceEEEEeEEEEcCCCcCchhhhccc---cccCC
Confidence 333467999999999988853 3322 211 00 01100114689999999999965432221111 22234
Q ss_pred cccceeeccccc-ccCceeEecchhhhhc--CCC--CCCc-chhhhhhchHHHHHHHHHHcCCCCCCC
Q 039605 267 TAEDAIVKLTRE-IVPGMIVAGMEVAEID--GAP--RMGP-TFGAMMISGQKAAHLALKSLGQPNAMD 328 (352)
Q Consensus 267 ~g~~~vv~~~~~-~~pg~~~aG~~~~~~~--g~~--r~g~-~~~~~~~sG~~aA~~i~~~l~~~~~~~ 328 (352)
.|...+.+++++ ..|++|++||++...+ +.+ ...+ +...+..+|..+|+.|.++|.+.....
T Consensus 283 ~G~i~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~g~~~~~ 350 (437)
T 3sx6_A 283 GGFVLVDEHQRSKKYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLEGRKGEQ 350 (437)
T ss_dssp TSCBCBCTTSBBSSCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHTTTSCCCC
T ss_pred CCcEEeChhccCCCCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 566666677777 7999999999986432 100 0011 233567899999999999997765433
No 159
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.04 E-value=1.8e-09 Score=99.94 Aligned_cols=111 Identities=22% Similarity=0.263 Sum_probs=75.4
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHH
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIM 185 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~ 185 (352)
++||+|||||++|+++|+.|++. |++|+|||+. ..||.+..... + .....+ ......++...+.
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~-g~~v~lie~~-~~gg~~~~~~~-----------~--~~~~~~-~~~~~~~~~~~~~ 79 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARS-GFSVAILDKA-VAGGLTAEAPL-----------V--ENYLGF-KSIVGSELAKLFA 79 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESS-STTGGGGGCSC-----------B--CCBTTB-SSBCHHHHHHHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhC-CCcEEEEeCC-CCCccccccch-----------h--hhcCCC-cccCHHHHHHHHH
Confidence 68999999999999999999999 9999999995 55554221100 0 000011 0112345555555
Q ss_pred HHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 186 SKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 186 ~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
+.+. +.|+++++ .++.++..+++.+. +.+ + ..++.+|.||+|+|..+
T Consensus 80 ~~~~-~~~v~~~~-~~v~~i~~~~~~~~-v~~-~--------------~~~~~~~~li~AtG~~~ 126 (319)
T 3cty_A 80 DHAA-NYAKIREG-VEVRSIKKTQGGFD-IET-N--------------DDTYHAKYVIITTGTTH 126 (319)
T ss_dssp HHHH-TTSEEEET-CCEEEEEEETTEEE-EEE-S--------------SSEEEEEEEEECCCEEE
T ss_pred HHHH-HcCCEEEE-eeEEEEEEeCCEEE-EEE-C--------------CCEEEeCEEEECCCCCc
Confidence 5555 56899988 68998887766543 333 1 14799999999999754
No 160
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.04 E-value=3.8e-10 Score=108.59 Aligned_cols=128 Identities=20% Similarity=0.292 Sum_probs=77.9
Q ss_pred CccEEEECCcHHHHHHHHHHhcC-CCCcEEEEeccCCCCCCc---ce-ee--c----c-------hHHHHHH-HcCC---
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKN-PNVQVAIIEQSVSPGGAS---GS-VV--R----K-------PAHLFLD-ELGI--- 163 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~-~G~kV~viEk~~~~GG~~---~~-~~--~----~-------~~~~~l~-~~Gi--- 163 (352)
++||+|||||++|+++|+.|+++ +|++|+|||+....++.. .. .+ . . ...+.+. ..++
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~s~~~~g~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 115 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEEGATILAPGVWTAQDIPAGQEAQAEWTREQLLGALGSGKT 115 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTTSHHHHCCCEECGGGCCTTCHHHHHHHHHHHHTGGGSSCC
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcchhccCCcceeecccCCchHHHHHHHHHHHHHHHhCCCCC
Confidence 58999999999999999999984 489999999986554431 11 11 0 0 0111111 1222
Q ss_pred -ccccCCCe-----------------------------------------EEEechHHHHHHHHHHHHcCCCcEEEccce
Q 039605 164 -DYDEQDNY-----------------------------------------VVIKHAALFTSTIMSKLLARPNVKLFNAVA 201 (352)
Q Consensus 164 -~~~~~~~~-----------------------------------------~~~~~~~~~~~~L~~~~~~~~gv~i~~~t~ 201 (352)
.+...+.+ ....+...+...|.+.+. +.|++++++++
T Consensus 116 ~~~~~~g~l~~~~~~~~~g~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~v~~~~l~~~L~~~~~-~~Gv~i~~~~~ 194 (405)
T 3c4n_A 116 LEVEDRPLLHLLPAGEGSGLTPTLDALADFPEALALLDPARLPVARVDPRALTYRPGSLALLAAQQAI-GQGAGLLLNTR 194 (405)
T ss_dssp CCEEECCEEEEESSCCSSSCEEHHHHTTTCHHHHTTSCTTTSCEEEEETTCEEECHHHHHHHHHHHHH-TTTCEEECSCE
T ss_pred CcEEeeCeEEehhhHhHCCCCCHHHHHHhCCCccccccCCcceEEEEcCCCEEEcHHHHHHHHHHHHH-HCCCEEEcCCE
Confidence 11110000 001233456777777776 57999999999
Q ss_pred eE---------EEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 202 AE---------DLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 202 v~---------~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
|+ ++..+++++ ++.+.+ .+++||.||+|+|.++
T Consensus 195 v~~~~g~~~~~~i~~~~~~v-~v~~~~---------------g~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 195 AELVPGGVRLHRLTVTNTHQ-IVVHET---------------RQIRAGVIIVAAGAAG 236 (405)
T ss_dssp EEEETTEEEEECBCC--------CBCC---------------EEEEEEEEEECCGGGH
T ss_pred EEeccccccccceEeeCCeE-EEEECC---------------cEEECCEEEECCCccH
Confidence 99 887666655 444321 3799999999999876
No 161
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.04 E-value=3.5e-10 Score=110.51 Aligned_cols=130 Identities=12% Similarity=0.092 Sum_probs=80.7
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCC-----CcEEEEeccCCCCCCccee-----e----------------cchHHHHH
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPN-----VQVAIIEQSVSPGGASGSV-----V----------------RKPAHLFL 158 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G-----~kV~viEk~~~~GG~~~~~-----~----------------~~~~~~~l 158 (352)
..+||+|||||++|+++|+.|++. | ++|+|||+.+..|...... + ......|+
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~-g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l 107 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQER-AQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYL 107 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHH-HHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhc-ccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhh
Confidence 468999999999999999999999 8 9999999998776332111 0 00112333
Q ss_pred HHcCCccc---cCCCeEEEechHHHHHHHHHHHHcCCCcEEEccceeEEEEEe--CCEEEE--EEEcccceeccCCCCCC
Q 039605 159 DELGIDYD---EQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK--GNRVGG--IVTNWALVSMNHDSQSC 231 (352)
Q Consensus 159 ~~~Gi~~~---~~~~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~--~g~v~g--v~~~~g~~~~~~~~~~~ 231 (352)
...+..+. +...+ ....++...+ +...++.+++++++++|+++..+ +++.+. +.+.++ .
T Consensus 108 ~~~~~~~~~~~~~~~~---~~~~~~~~~l-~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g----------~ 173 (463)
T 3s5w_A 108 HKHDRLVDFINLGTFY---PCRMEFNDYL-RWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNA----------D 173 (463)
T ss_dssp HHTTCHHHHHHHCCSC---CBHHHHHHHH-HHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEET----------T
T ss_pred hhcCceeecccccCCC---CCHHHHHHHH-HHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecC----------C
Confidence 33331110 00001 1233444443 33444668999999999999876 244432 333221 0
Q ss_pred CCCeEEEeCEEEEccCCC
Q 039605 232 MDPNVMEAKVVVSSCGHD 249 (352)
Q Consensus 232 g~~~~i~A~~VIlAtG~~ 249 (352)
++..++.+|.||+|||..
T Consensus 174 g~~~~~~~d~lVlAtG~~ 191 (463)
T 3s5w_A 174 GEELVRTTRALVVSPGGT 191 (463)
T ss_dssp SCEEEEEESEEEECCCCE
T ss_pred CceEEEEeCEEEECCCCC
Confidence 123489999999999974
No 162
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.04 E-value=2.7e-10 Score=110.69 Aligned_cols=125 Identities=14% Similarity=0.060 Sum_probs=75.9
Q ss_pred HHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCccccc
Q 039605 185 MSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALD 264 (352)
Q Consensus 185 ~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~ 264 (352)
+++..++.||++++++.++++. .+++ ...+ .+++.+++.+|.+|.++|..++.... ..+. .+.
T Consensus 206 l~~~l~~~GV~~~~~~~v~~v~--~~~~---~~~~----------~~g~~~~i~~d~vi~~~G~~~~~~~~-~~~~-~l~ 268 (430)
T 3hyw_A 206 VEDLFAERNIDWIANVAVKAIE--PDKV---IYED----------LNGNTHEVPAKFTMFMPSFQGPEVVA-SAGD-KVA 268 (430)
T ss_dssp HHHHHHHTTCEEECSCEEEEEC--SSEE---EEEC----------TTSCEEEEECSEEEEECEEECCHHHH-TTCT-TTB
T ss_pred HHHHHHhCCeEEEeCceEEEEe--CCce---EEEe----------eCCCceEeecceEEEeccCCCchHHH-hccc-ccc
Confidence 4444446799999999998874 3333 2221 11235789999999999965432110 0110 111
Q ss_pred ccc-ccceeecccc-cccCceeEecchhhhhcCCC----CCCc-chhhhhhchHHHHHHHHHHcCCCCC
Q 039605 265 MNT-AEDAIVKLTR-EIVPGMIVAGMEVAEIDGAP----RMGP-TFGAMMISGQKAAHLALKSLGQPNA 326 (352)
Q Consensus 265 ~~~-g~~~vv~~~~-~~~pg~~~aG~~~~~~~g~~----r~g~-~~~~~~~sG~~aA~~i~~~l~~~~~ 326 (352)
.+. +.+.+.++++ +.+|++|++||++...+... ...| +...+..+|+.+|+.|++.|++...
T Consensus 269 ~~~~g~i~vd~~lq~t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~g~~~ 337 (430)
T 3hyw_A 269 NPANKMVIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNPD 337 (430)
T ss_dssp CTTTCCBCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred cCCceEEEecccccCCCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 222 3344446666 78899999999986432111 1112 2224567899999999999987653
No 163
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.02 E-value=3.1e-10 Score=111.11 Aligned_cols=173 Identities=13% Similarity=0.107 Sum_probs=108.4
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCC-cEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHH
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNV-QVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTI 184 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~-kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L 184 (352)
.-+|+|||||..|+-+|..+.+. |. +|+++++..... ++ . ...+
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r~-Ga~~Vtiv~r~~~~~-------------------~p-----~-----~~~e----- 308 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIRQ-GATSVKCLYRRDRKN-------------------MP-----G-----SQRE----- 308 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHT-TCSEEEEECSSCSTT-------------------CS-----S-----CHHH-----
T ss_pred CCEEEEECCChhHHHHHHHHHHc-CCCEEEEEEeCCccC-------------------CC-----C-----CHHH-----
Confidence 34799999999999999999999 87 499999875320 00 0 0111
Q ss_pred HHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCC------CCCCeEEEeCEEEEccCCCCCCCCCCCC
Q 039605 185 MSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQS------CMDPNVMEAKVVVSSCGHDGPFGATGVR 258 (352)
Q Consensus 185 ~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~------~g~~~~i~A~~VIlAtG~~~~~~~~g~~ 258 (352)
++.+. +.|+++++++.+.++.. ++++.++.+..........++. +|+..++.+|.||+|+|..+.... .+.
T Consensus 309 ~~~~~-~~Gv~~~~~~~~~~i~~-~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~-~~l 385 (456)
T 2vdc_G 309 VAHAE-EEGVEFIWQAAPEGFTG-DTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLP-NAF 385 (456)
T ss_dssp HHHHH-HTTCEEECCSSSCCEEE-EEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHH-HHH
T ss_pred HHHHH-HCCCEEEeCCCceEEeC-CCcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCCCcch-hhc
Confidence 12233 46999999999998875 4555544442100000000000 123468999999999996432210 011
Q ss_pred Cccccccc-cccceeecc-cccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHHcCC
Q 039605 259 GMKALDMN-TAEDAIVKL-TREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQ 323 (352)
Q Consensus 259 g~~~~~~~-~g~~~vv~~-~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~l~~ 323 (352)
...++..+ .+...+.++ .++..|++|++||++... ..+..++.+|+.||..|..+|.+
T Consensus 386 ~~~gl~~~~~G~i~vd~~~~~Ts~~~VfA~GD~~~g~-------~~v~~A~~~G~~aA~~i~~~L~~ 445 (456)
T 2vdc_G 386 DEPELKVTRWGTLLVDHRTKMTNMDGVFAAGDIVRGA-------SLVVWAIRDGRDAAEGIHAYAKA 445 (456)
T ss_dssp HSTTSCBCTTSSBCCCTTTCBCSSTTEEECGGGGSSC-------CSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeeECCCCCEEECCCCCcCCCCCEEEeccccCCc-------hHHHHHHHHHHHHHHHHHHHhhc
Confidence 11123322 355555555 678999999999997531 23445688999999999999854
No 164
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.01 E-value=3.1e-10 Score=105.63 Aligned_cols=114 Identities=15% Similarity=0.214 Sum_probs=75.6
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEec----cCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHH
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQ----SVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFT 181 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk----~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~ 181 (352)
.+||+|||||++|+++|+.|++. |++|+|||+ ....||........ ... ..+.......++.
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~-g~~v~lie~~~~~~~~~gg~~~~~~~~--------~~~-----~~~~~~~~~~~~~ 73 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARA-ELKPLLFEGWMANDIAPGGQLTTTTDV--------ENF-----PGFPEGILGVELT 73 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCCEEECCSSBTTBCTTCGGGGCSEE--------CCS-----TTCTTCEEHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCeEEEEeccCccccCCCceeeecccc--------ccC-----CCCccCCCHHHHH
Confidence 57999999999999999999999 999999998 44555532111000 000 0010011345566
Q ss_pred HHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCC
Q 039605 182 STIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGP 251 (352)
Q Consensus 182 ~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~ 251 (352)
..+.+.+. +.|+++++++ +.++..+++.+. +.+ + ..+++++.||+|+|.++.
T Consensus 74 ~~l~~~~~-~~gv~~~~~~-v~~i~~~~~~~~-v~~-~--------------~~~~~~~~vv~A~G~~~~ 125 (333)
T 1vdc_A 74 DKFRKQSE-RFGTTIFTET-VTKVDFSSKPFK-LFT-D--------------SKAILADAVILAIGAVAK 125 (333)
T ss_dssp HHHHHHHH-HTTCEEECCC-CCEEECSSSSEE-EEC-S--------------SEEEEEEEEEECCCEEEC
T ss_pred HHHHHHHH-HCCCEEEEeE-EEEEEEcCCEEE-EEE-C--------------CcEEEcCEEEECCCCCcC
Confidence 66665555 5689999986 888876555332 322 2 257999999999998753
No 165
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=99.00 E-value=1.8e-09 Score=108.51 Aligned_cols=56 Identities=16% Similarity=0.184 Sum_probs=43.8
Q ss_pred HHHHHcCCCcEEEccceeEEEEEe----CCEEEEEEEcccceeccCCCCCCCCCeEEEeC-EEEEccCCCC
Q 039605 185 MSKLLARPNVKLFNAVAAEDLIVK----GNRVGGIVTNWALVSMNHDSQSCMDPNVMEAK-VVVSSCGHDG 250 (352)
Q Consensus 185 ~~~~~~~~gv~i~~~t~v~~l~~~----~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~-~VIlAtG~~~ 250 (352)
+..+.+++|+++++++.|++|+++ +++++||+... .+|+..+++|+ -||+|+|+..
T Consensus 233 L~p~~~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~----------~~G~~~~v~A~kEVILsAGa~~ 293 (583)
T 3qvp_A 233 LLPNYQRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGT----------HKGNTHNVYAKHEVLLAAGSAV 293 (583)
T ss_dssp TTTTTTCTTEEEECSCEEEEEEEECSSSSCEEEEEEEES----------STTCEEEEEEEEEEEECSCTTT
T ss_pred HHHhhcCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEe----------cCCcEEEEEECCEEEEeCCccC
Confidence 333445789999999999999998 67999998742 01245789996 6999999875
No 166
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.00 E-value=7.3e-10 Score=109.30 Aligned_cols=129 Identities=22% Similarity=0.236 Sum_probs=73.8
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEec--------cCCCCCCcceeecch------------HHHHHHHcCCc
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQ--------SVSPGGASGSVVRKP------------AHLFLDELGID 164 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk--------~~~~GG~~~~~~~~~------------~~~~l~~~Gi~ 164 (352)
.+|||+|||||++|+++|+.|++. |++|+|||| ....||.+...-..| ..+.+..+|+.
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~-G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~ 83 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQL-GKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWE 83 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC-CCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCcc
Confidence 478999999999999999999999 999999998 445677543221111 12334567776
Q ss_pred cccCCCeEE---EechHHHHHHH---HHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEE
Q 039605 165 YDEQDNYVV---IKHAALFTSTI---MSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVME 238 (352)
Q Consensus 165 ~~~~~~~~~---~~~~~~~~~~L---~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~ 238 (352)
+.......+ ..+...+...+ +....+..+++++.+. +.. .+...+ .+...+ |+..++.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~-~~~--~~~~~v-~v~~~~------------g~~~~~~ 147 (488)
T 3dgz_A 84 VAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIK-ASF--VDEHTV-RGVDKG------------GKATLLS 147 (488)
T ss_dssp CCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCE-EEE--SSSSEE-EEECTT------------SCEEEEE
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEE--ccCCeE-EEEeCC------------CceEEEE
Confidence 542111110 00111122111 2222335688887663 211 122222 222211 1346899
Q ss_pred eCEEEEccCCCC
Q 039605 239 AKVVVSSCGHDG 250 (352)
Q Consensus 239 A~~VIlAtG~~~ 250 (352)
+|+||+|||..+
T Consensus 148 ~d~lViATGs~p 159 (488)
T 3dgz_A 148 AEHIVIATGGRP 159 (488)
T ss_dssp EEEEEECCCEEE
T ss_pred CCEEEEcCCCCC
Confidence 999999999643
No 167
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.99 E-value=7.7e-09 Score=104.51 Aligned_cols=162 Identities=12% Similarity=0.138 Sum_probs=104.8
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHHH
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMSK 187 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~~ 187 (352)
.|+|||||..|+-+|..|++. |.+|+++++...... ...++...+.+.
T Consensus 288 ~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~l~~-------------------------------~d~~~~~~~~~~ 335 (598)
T 2x8g_A 288 KTLVIGASYVALECAGFLASL-GGDVTVMVRSILLRG-------------------------------FDQQMAEKVGDY 335 (598)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCSSTT-------------------------------SCHHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHc-CCEEEEEECCcCcCc-------------------------------CCHHHHHHHHHH
Confidence 699999999999999999999 999999998622110 012333444444
Q ss_pred HHcCCCcEEEccceeEEEEEe------C---CEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCC
Q 039605 188 LLARPNVKLFNAVAAEDLIVK------G---NRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVR 258 (352)
Q Consensus 188 ~~~~~gv~i~~~t~v~~l~~~------~---g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~ 258 (352)
+. +.|+++++++.+.++... + +++. +.... .+ |+...+.+|.||+|+|..+.....+ .
T Consensus 336 l~-~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~-v~~~~-------~~---g~~~~~~~D~vi~a~G~~p~~~~l~-~ 402 (598)
T 2x8g_A 336 ME-NHGVKFAKLCVPDEIKQLKVVDTENNKPGLLL-VKGHY-------TD---GKKFEEEFETVIFAVGREPQLSKVL-C 402 (598)
T ss_dssp HH-HTTCEEEETEEEEEEEEEECCBTTTTBCCEEE-EEEEE-------TT---SCEEEEEESEEEECSCEEECGGGTB-C
T ss_pred HH-hCCCEEEECCeEEEEEeccccccccCCCceEE-EEEEe-------CC---CcEEeccCCEEEEEeCCccccCccC-c
Confidence 44 569999999888887542 2 3332 22110 01 1234566999999999654321110 1
Q ss_pred Cccccccc-cccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHH
Q 039605 259 GMKALDMN-TAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKS 320 (352)
Q Consensus 259 g~~~~~~~-~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~ 320 (352)
...++..+ .|.+.+.+++++..|++|++||++.. .+. .+..+..+|+.||..|+..
T Consensus 403 ~~~gl~~~~~G~i~vd~~~~ts~~~VyA~GD~~~~---~~~---~~~~A~~~g~~aa~~i~~~ 459 (598)
T 2x8g_A 403 ETVGVKLDKNGRVVCTDDEQTTVSNVYAIGDINAG---KPQ---LTPVAIQAGRYLARRLFAG 459 (598)
T ss_dssp GGGCCCBCTTSCBCCCTTSBCSSTTEEECGGGBTT---SCC---CHHHHHHHHHHHHHHHHHC
T ss_pred hhcCceECCCCcEEeCCCCcCCCCCEEEEeeecCC---CCc---cHHHHHHhHHHHHHHHhcC
Confidence 11223332 46666677888999999999999642 111 3445578999999999853
No 168
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.98 E-value=3.3e-09 Score=102.28 Aligned_cols=37 Identities=35% Similarity=0.560 Sum_probs=35.5
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGA 145 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~ 145 (352)
||+|||||++||++|++|+++ |++|+|+|+++.+||.
T Consensus 2 dVvVIGaGiaGLsaA~~La~~-G~~V~vlE~~~~~GG~ 38 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARN-GHEIIVLEKSAMIGGR 38 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-TCEEEEECSSSSSCTT
T ss_pred cEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCCCce
Confidence 899999999999999999999 9999999999988876
No 169
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.97 E-value=1.3e-09 Score=101.87 Aligned_cols=113 Identities=19% Similarity=0.222 Sum_probs=72.7
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHH
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTI 184 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L 184 (352)
..+||+|||||++|+++|+.|++. |++|+|||+. .+||.+..... ......+.......++...+
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~-~~gg~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l 77 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARA-QLAPLVFEGT-SFGGALMTTTD-------------VENYPGFRNGITGPELMDEM 77 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHT-TCCCEEECCS-SCSCGGGSCSC-------------BCCSTTCTTCBCHHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC-CCeEEEEecC-CCCCceeccch-------------hhhcCCCCCCCCHHHHHHHH
Confidence 468999999999999999999999 9999999976 55554221100 00000010001234555555
Q ss_pred HHHHHcCCCcEEEccceeEEEEEeCCEEEEE-EEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 185 MSKLLARPNVKLFNAVAAEDLIVKGNRVGGI-VTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 185 ~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv-~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
.+.+. +.|+++++++ +.++.. ++.+ .+ .+.+ ..++.+|.||+|+|..+
T Consensus 78 ~~~~~-~~~v~~~~~~-v~~i~~-~~~~-~v~~~~~--------------g~~~~~d~lviAtG~~~ 126 (335)
T 2a87_A 78 REQAL-RFGADLRMED-VESVSL-HGPL-KSVVTAD--------------GQTHRARAVILAMGAAA 126 (335)
T ss_dssp HHHHH-HTTCEEECCC-EEEEEC-SSSS-EEEEETT--------------SCEEEEEEEEECCCEEE
T ss_pred HHHHH-HcCCEEEEee-EEEEEe-CCcE-EEEEeCC--------------CCEEEeCEEEECCCCCc
Confidence 55554 5689999886 777765 3222 12 3322 25799999999999754
No 170
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.96 E-value=1.9e-09 Score=99.20 Aligned_cols=113 Identities=18% Similarity=0.262 Sum_probs=74.4
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHH
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIM 185 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~ 185 (352)
+|||+|||||++|+++|+.|++. |++|+|||+. .||.+... .+++......+ ....++...+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~-g~~v~li~~~--~gG~~~~~-----------~~~~~~~~~~~---~~~~~~~~~~~ 63 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARK-GIRTGLMGER--FGGQILDT-----------VDIENYISVPK---TEGQKLAGALK 63 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTT-TCCEEEECSS--TTGGGGGC-----------CEECCBTTBSS---EEHHHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCcEEEEeCC--CCceeccc-----------cccccccCcCC---CCHHHHHHHHH
Confidence 37999999999999999999999 9999999863 45532211 01100000001 12345555555
Q ss_pred HHHHcCCCcEEEccceeEEEEEeC--CEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 186 SKLLARPNVKLFNAVAAEDLIVKG--NRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 186 ~~~~~~~gv~i~~~t~v~~l~~~~--g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
+.+. +.+++++.++++..+..++ +..+.+.+.+ ..++.+|.||+|+|..+
T Consensus 64 ~~~~-~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~--------------g~~~~~~~lv~AtG~~~ 115 (310)
T 1fl2_A 64 VHVD-EYDVDVIDSQSASKLIPAAVEGGLHQIETAS--------------GAVLKARSIIVATGAKW 115 (310)
T ss_dssp HHHH-TSCEEEECSCCEEEEECCSSTTCCEEEEETT--------------SCEEEEEEEEECCCEEE
T ss_pred HHHH-HcCCeEEccCEEEEEEecccCCceEEEEECC--------------CCEEEeCEEEECcCCCc
Confidence 5554 6799999999999887542 2223344432 24799999999999764
No 171
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.96 E-value=4.5e-10 Score=110.16 Aligned_cols=128 Identities=18% Similarity=0.263 Sum_probs=74.9
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHH------------H-HHHcCCccccC-CCe
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHL------------F-LDELGIDYDEQ-DNY 171 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~------------~-l~~~Gi~~~~~-~~~ 171 (352)
++||+|||||++|+++|+.|++. |++|+|||+.+..||.+......|... . +..+|+++... ..+
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~-g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 84 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQL-GFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEIDL 84 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccCH
Confidence 68999999999999999999999 999999999988888643221112111 1 33455543210 000
Q ss_pred EE-EechHH----HHHHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEcc
Q 039605 172 VV-IKHAAL----FTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSC 246 (352)
Q Consensus 172 ~~-~~~~~~----~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAt 246 (352)
.. ..+... +...+.+.+ ++.|++++.++.+. .+.+.+ .+.+.+ |+..++++|.+|+||
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~-~~~gv~~~~g~~~~---~~~~~~-~v~~~~------------G~~~~i~~d~lIiAt 147 (470)
T 1dxl_A 85 AAMMGQKDKAVSNLTRGIEGLF-KKNKVTYVKGYGKF---VSPSEI-SVDTIE------------GENTVVKGKHIIIAT 147 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-HHHTCEEEESCEEE---EETTEE-EECCSS------------SCCEEEECSEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HhCCCEEEEeEEEE---ecCCEE-EEEeCC------------CceEEEEcCEEEECC
Confidence 00 000111 111122223 34689999887543 344432 122111 123679999999999
Q ss_pred CCCCC
Q 039605 247 GHDGP 251 (352)
Q Consensus 247 G~~~~ 251 (352)
|..+.
T Consensus 148 Gs~p~ 152 (470)
T 1dxl_A 148 GSDVK 152 (470)
T ss_dssp CEEEC
T ss_pred CCCCC
Confidence 97643
No 172
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.96 E-value=1.8e-09 Score=99.26 Aligned_cols=111 Identities=21% Similarity=0.277 Sum_probs=73.8
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEE-EeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHH
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAI-IEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTI 184 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~v-iEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L 184 (352)
.+||+|||||++|+++|+.|++. |++|+| +|| ..+||.+..... +.....+.......++...+
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~li~e~-~~~gG~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~ 68 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRG-GLKNVVMFEK-GMPGGQITSSSE-------------IENYPGVAQVMDGISFMAPW 68 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-TCSCEEEECS-SSTTGGGGGCSC-------------BCCSTTCCSCBCHHHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHC-CCCeEEEEeC-CCCCceeeeece-------------eccCCCCCCCCCHHHHHHHH
Confidence 57999999999999999999999 999999 999 556664222110 00000111012345555655
Q ss_pred HHHHHcCCCcEEEccceeEEEEEeC--CEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCC
Q 039605 185 MSKLLARPNVKLFNAVAAEDLIVKG--NRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHD 249 (352)
Q Consensus 185 ~~~~~~~~gv~i~~~t~v~~l~~~~--g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~ 249 (352)
.+.+. +.+++++++ ++.++ .++ +.+. +.+.. +. ++.+|.||+|+|..
T Consensus 69 ~~~~~-~~~v~~~~~-~v~~i-~~~~~~~~~-v~~~~-------------~~-~~~~d~lvlAtG~~ 117 (315)
T 3r9u_A 69 SEQCM-RFGLKHEMV-GVEQI-LKNSDGSFT-IKLEG-------------GK-TELAKAVIVCTGSA 117 (315)
T ss_dssp HHHHT-TTCCEEECC-CEEEE-EECTTSCEE-EEETT-------------SC-EEEEEEEEECCCEE
T ss_pred HHHHH-HcCcEEEEE-EEEEE-ecCCCCcEE-EEEec-------------CC-EEEeCEEEEeeCCC
Confidence 55554 679999988 88888 665 4432 21221 13 89999999999974
No 173
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.96 E-value=6.2e-10 Score=109.18 Aligned_cols=41 Identities=34% Similarity=0.523 Sum_probs=37.9
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcc
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASG 147 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~ 147 (352)
+|||+|||||++|+++|+.|++. |++|+||||.+.+||.+.
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~-G~~V~liEk~~~~GG~~~ 44 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKA-KYNVLMADPKGELGGNCL 44 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECTTSSSSHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhC-CCeEEEEECCCCCCCccc
Confidence 58999999999999999999999 999999998888888644
No 174
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.94 E-value=5.7e-10 Score=109.43 Aligned_cols=127 Identities=15% Similarity=0.181 Sum_probs=74.2
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHH---------H----HHHcCCccccCCCeE
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHL---------F----LDELGIDYDEQDNYV 172 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~---------~----l~~~Gi~~~~~~~~~ 172 (352)
++||+|||||++|+++|++|++. |++|+|||+.+.+||.+......|... + +..+|+++.......
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~-g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 80 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQL-GMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMD 80 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCccC
Confidence 57999999999999999999999 999999999988887643221112111 1 334565531100000
Q ss_pred E---EechHHHH----HHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEc
Q 039605 173 V---IKHAALFT----STIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSS 245 (352)
Q Consensus 173 ~---~~~~~~~~----~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlA 245 (352)
+ ..+...+. ..+.+.+ ++.|++++.++.+. .+.+.+ .+...+ |+..++.+|.+|+|
T Consensus 81 ~~~~~~~~~~~~~~l~~~~~~~~-~~~~v~~~~g~~~~---i~~~~~-~v~~~~------------G~~~~~~~d~lviA 143 (468)
T 2qae_A 81 SAKMQQQKERAVKGLTGGVEYLF-KKNKVTYYKGEGSF---ETAHSI-RVNGLD------------GKQEMLETKKTIIA 143 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-HHHTCEEEEEEEEE---EETTEE-EEEETT------------SCEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HhCCCEEEEEEEEE---eeCCEE-EEEecC------------CceEEEEcCEEEEC
Confidence 0 00011111 1122222 34689999886432 344433 233321 12367999999999
Q ss_pred cCCCC
Q 039605 246 CGHDG 250 (352)
Q Consensus 246 tG~~~ 250 (352)
||..+
T Consensus 144 tG~~p 148 (468)
T 2qae_A 144 TGSEP 148 (468)
T ss_dssp CCEEE
T ss_pred CCCCc
Confidence 99754
No 175
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.94 E-value=2.1e-09 Score=99.37 Aligned_cols=112 Identities=11% Similarity=0.180 Sum_probs=72.9
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHH
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIM 185 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~ 185 (352)
.+||+|||||++|+++|+.|++. |++|+|||+. .+||.+..... ......+.......++...+.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~-g~~v~lie~~-~~gg~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~ 69 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARA-NLQPVLITGM-EKGGQLTTTTE-------------VENWPGDPNDLTGPLLMERMH 69 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT-TCCCEEECCS-STTGGGGGCSB-------------CCCSTTCCSSCBHHHHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCcEEEEccC-CCCceEecchh-------------hhhCCCCCCCCCHHHHHHHHH
Confidence 57999999999999999999999 9999999975 55553211100 000001100012345555555
Q ss_pred HHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 186 SKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 186 ~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
+.+. +.++++++++ +..+..+++.+. + ..+ ..++.+|+||+|+|..+
T Consensus 70 ~~~~-~~~~~~~~~~-v~~i~~~~~~~~-v-~~~--------------~~~~~~~~lv~AtG~~~ 116 (320)
T 1trb_A 70 EHAT-KFETEIIFDH-INKVDLQNRPFR-L-NGD--------------NGEYTCDALIIATGASA 116 (320)
T ss_dssp HHHH-HTTCEEECCC-EEEEECSSSSEE-E-EES--------------SCEEEEEEEEECCCEEE
T ss_pred HHHH-HCCCEEEEee-eeEEEecCCEEE-E-EeC--------------CCEEEcCEEEECCCCCc
Confidence 5544 5689999885 777766555442 2 222 25799999999999754
No 176
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.92 E-value=3.5e-09 Score=113.40 Aligned_cols=167 Identities=16% Similarity=0.168 Sum_probs=110.8
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCC-cEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNV-QVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~-kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
.|+|||||..|+-+|..|.+. |. +|+||++.+..- . + . ...++ +
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~-G~~~Vtvv~r~~~~~------~-------------~-----~-----~~~e~-----~ 378 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRC-GARRVFLVFRKGFVN------I-------------R-----A-----VPEEV-----E 378 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHT-TCSEEEEECSSCGGG------C-------------C-----S-----CHHHH-----H
T ss_pred cEEEECCChHHHHHHHHHHHc-CCCEEEEEEecChhh------C-------------C-----C-----CHHHH-----H
Confidence 899999999999999999999 86 899999875210 0 0 0 01111 2
Q ss_pred HHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCC----CCCCCeEEEeCEEEEccCCCCCCCCCCCC-Ccc
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQ----SCMDPNVMEAKVVVSSCGHDGPFGATGVR-GMK 261 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~----~~g~~~~i~A~~VIlAtG~~~~~~~~g~~-g~~ 261 (352)
.+. +.|+++++++.+.++..+++++.++.+.... .+. ++ ..++..++.+|.||+|+|...+.. .+. ...
T Consensus 379 ~~~-~~Gv~~~~~~~~~~i~~~~g~v~~v~~~~~~--~~~-~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~--~l~~~~~ 452 (1025)
T 1gte_A 379 LAK-EEKCEFLPFLSPRKVIVKGGRIVAVQFVRTE--QDE-TGKWNEDEDQIVHLKADVVISAFGSVLRDP--KVKEALS 452 (1025)
T ss_dssp HHH-HTTCEEECSEEEEEEEEETTEEEEEEEEEEE--ECT-TSCEEEEEEEEEEEECSEEEECSCEECCCH--HHHHHTT
T ss_pred HHH-HcCCEEEeCCCceEEEccCCeEEEEEEEEeE--EcC-CCCcccCCCceEEEECCEEEECCCCCCCch--hhhhccc
Confidence 222 4699999999999998878888888764210 000 00 011235799999999999644311 111 111
Q ss_pred ccccc-cccceeec-ccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHHcC
Q 039605 262 ALDMN-TAEDAIVK-LTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLG 322 (352)
Q Consensus 262 ~~~~~-~g~~~vv~-~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~l~ 322 (352)
++..+ .|.+.+.+ +.++..|++|++||++.. +. ....++.+|+.||..|..+|.
T Consensus 453 gl~~~~~G~I~vd~~~~~Ts~~~VfA~GD~~~~----~~---~~~~A~~~G~~aA~~i~~~L~ 508 (1025)
T 1gte_A 453 PIKFNRWDLPEVDPETMQTSEPWVFAGGDIVGM----AN---TTVESVNDGKQASWYIHKYIQ 508 (1025)
T ss_dssp TSCBCTTSSBCCCTTTCBCSSTTEEECSGGGCS----CC---CHHHHHHHHHHHHHHHHHHHH
T ss_pred CceECCCCCEEECCCCCccCCCCEEEeCCCCCC----ch---HHHHHHHHHHHHHHHHHHHHH
Confidence 23333 35545554 678899999999999853 12 233457899999999999885
No 177
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.92 E-value=6.7e-10 Score=98.12 Aligned_cols=39 Identities=31% Similarity=0.565 Sum_probs=37.0
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGA 145 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~ 145 (352)
++||+||||||+||+||+.|+++ |++|+||||.+.+||.
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~-G~~V~v~Ek~~~~GG~ 40 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAA-GHQVHLFDKSRGSGGR 40 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCCCCCCc
Confidence 57999999999999999999999 9999999999998875
No 178
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.91 E-value=5.8e-09 Score=101.52 Aligned_cols=39 Identities=31% Similarity=0.632 Sum_probs=36.4
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCC------CcEEEEeccCCCCCC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPN------VQVAIIEQSVSPGGA 145 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G------~kV~viEk~~~~GG~ 145 (352)
.+||+|||||++||+||++|+++ | ++|+|+|+.+.+||.
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~-G~~~~~~~~V~vlEa~~~~GG~ 49 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKE-IKEKNLPLELTLVEASPRVGGK 49 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-HTTTTCSEEEEEECSSSSSCTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHh-ccccCCCCCEEEEECCCCCCce
Confidence 47999999999999999999999 8 999999999888875
No 179
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.91 E-value=4.4e-09 Score=104.44 Aligned_cols=53 Identities=17% Similarity=0.204 Sum_probs=42.8
Q ss_pred HHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCC
Q 039605 186 SKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHD 249 (352)
Q Consensus 186 ~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~ 249 (352)
.....+.|++++.++.+.+++.++++++|+..... + ....+.|+.||+|+|..
T Consensus 218 ~~~~~r~nl~v~~~~~v~~i~~~~~~a~gv~~~~~-------~----~~~~~~a~~VILsAGai 270 (526)
T 3t37_A 218 KAVRGRKNLTILTGSRVRRLKLEGNQVRSLEVVGR-------Q----GSAEVFADQIVLCAGAL 270 (526)
T ss_dssp HHHHTCTTEEEECSCEEEEEEEETTEEEEEEEEET-------T----EEEEEEEEEEEECSHHH
T ss_pred ccccCCCCeEEEeCCEEEEEEecCCeEEEEEEEec-------C----ceEEEeecceEEccccc
Confidence 34445789999999999999999999999987431 1 24678899999999974
No 180
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.90 E-value=5.2e-10 Score=109.95 Aligned_cols=40 Identities=30% Similarity=0.510 Sum_probs=36.9
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCc
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGAS 146 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~ 146 (352)
++||+|||||++|+++|+.|++. |++|+|||+.+.+||.+
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~-G~~V~liE~~~~~GG~~ 44 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQL-GFNTACVEKRGKLGGTC 44 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSSSSHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCeEEEEecCCCcCCcc
Confidence 58999999999999999999999 99999999987887753
No 181
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=98.90 E-value=2.3e-08 Score=97.90 Aligned_cols=119 Identities=14% Similarity=0.085 Sum_probs=77.7
Q ss_pred CCcEEEccceeEEEEEeC-C-EEEEEEEcccceeccCC-C--C--CCCCCeEEEeCEEEEccCCCCCCCCCCCCCccccc
Q 039605 192 PNVKLFNAVAAEDLIVKG-N-RVGGIVTNWALVSMNHD-S--Q--SCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALD 264 (352)
Q Consensus 192 ~gv~i~~~t~v~~l~~~~-g-~v~gv~~~~g~~~~~~~-~--~--~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~ 264 (352)
.|+++++++.+.++..++ + ++.++.+.... +... + . .+|+..++.+|.||.|+|..+.. ..|+ . .
T Consensus 270 ~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~--l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~-l~gl---~--~ 341 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTR--LEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRP-IDPS---V--P 341 (460)
T ss_dssp EEEEEECSEEEEEEEECTTSSSEEEEEEEEEE--EESSGGGCEEEEEEEEEEEECSEEEECCCEECCC-CCTT---S--C
T ss_pred ceEEEECCCChheEEcCCCCceEEEEEEEEEE--EccccCCCcccCCCceEEEEcCEEEECCCCCCCC-CCCC---c--c
Confidence 789999999999998764 5 67777653210 0000 0 0 01234689999999999976543 2222 0 2
Q ss_pred cc-cccceeecccccc-cCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHHcCCC
Q 039605 265 MN-TAEDAIVKLTREI-VPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQP 324 (352)
Q Consensus 265 ~~-~g~~~vv~~~~~~-~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~l~~~ 324 (352)
.+ .+...+.++.++. .|++|++||+..... ..++.++.+|..+|..|+.+|...
T Consensus 342 ~d~~g~i~vn~~~rt~~~p~vya~Gd~~~g~~------~~i~~a~~~g~~aa~~i~~~l~~~ 397 (460)
T 1cjc_A 342 FDPKLGVVPNMEGRVVDVPGLYCSGWVKRGPT------GVITTTMTDSFLTGQILLQDLKAG 397 (460)
T ss_dssp CBTTTTBCCEETTEETTCTTEEECTHHHHCTT------CCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccCCCeeECCCCcCcCCCCEEEEEeCCcCCC------ccHHHHHHHHHHHHHHHHHHHHhC
Confidence 22 2444555677777 799999999985321 124456889999999999998653
No 182
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.89 E-value=9.9e-10 Score=107.87 Aligned_cols=40 Identities=30% Similarity=0.543 Sum_probs=37.3
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCc
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGAS 146 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~ 146 (352)
++||+|||||++|+++|+.|++. |++|+|||+.+.+||.+
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~-g~~V~liE~~~~~GG~~ 45 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQL-GFKTVCIEKNETLGGTC 45 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSSSSHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCCcCCcc
Confidence 58999999999999999999999 99999999998888764
No 183
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.89 E-value=2.5e-09 Score=107.53 Aligned_cols=51 Identities=22% Similarity=0.256 Sum_probs=40.9
Q ss_pred cCCCcEEEccceeEEEEEe--CCEEEEEEEcccceeccCCCCCCCCCeEEEe-CEEEEccCCCC
Q 039605 190 ARPNVKLFNAVAAEDLIVK--GNRVGGIVTNWALVSMNHDSQSCMDPNVMEA-KVVVSSCGHDG 250 (352)
Q Consensus 190 ~~~gv~i~~~t~v~~l~~~--~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A-~~VIlAtG~~~ 250 (352)
+++|+++++++.|++|+++ +++++||++... +|...+++| +-||+|+|+..
T Consensus 217 ~r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~~----------~g~~~~v~A~keVILsaGa~~ 270 (577)
T 3q9t_A 217 NKPNITIVPEVHSKRLIINEADRTCKGVTVVTA----------AGNELNFFADREVILSQGVFE 270 (577)
T ss_dssp SCTTEEEECSEEEEEEEEETTTTEEEEEEEEET----------TSCEEEEEEEEEEEECSHHHH
T ss_pred cCCCeEEEcCcEEEEEEEeCCCCEEEEEEEEeC----------CCcEEEEEeeeEEEEcccccC
Confidence 4679999999999999999 789999988531 124568889 57999999754
No 184
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.89 E-value=5.2e-09 Score=104.08 Aligned_cols=116 Identities=16% Similarity=0.265 Sum_probs=77.1
Q ss_pred CCCCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHH
Q 039605 103 THADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTS 182 (352)
Q Consensus 103 ~~~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~ 182 (352)
....+||+|||||++|+++|+.|++. |++|+|||+. .||.+... .+++.... +. .....++..
T Consensus 209 ~~~~~dVvIIGgG~AGl~aA~~la~~-G~~v~lie~~--~GG~~~~~-----------~~~~~~~~--~~-~~~~~~l~~ 271 (521)
T 1hyu_A 209 KRDAYDVLIVGSGPAGAAAAVYSARK-GIRTGLMGER--FGGQVLDT-----------VDIENYIS--VP-KTEGQKLAG 271 (521)
T ss_dssp TSCCEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSS--TTGGGTTC-----------SCBCCBTT--BS-SBCHHHHHH
T ss_pred ccCcccEEEECCcHHHHHHHHHHHhC-CCeEEEEECC--CCCccccc-----------ccccccCC--CC-CCCHHHHHH
Confidence 34578999999999999999999999 9999999963 45532110 11110000 00 013445556
Q ss_pred HHHHHHHcCCCcEEEccceeEEEEEeC--CEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 183 TIMSKLLARPNVKLFNAVAAEDLIVKG--NRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 183 ~L~~~~~~~~gv~i~~~t~v~~l~~~~--g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
.+.+.+. +.|++++.++++..+..+. +..+.+.+.+ ..+++++.||+|||.++
T Consensus 272 ~l~~~~~-~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~--------------g~~~~~d~vVlAtG~~~ 326 (521)
T 1hyu_A 272 ALKAHVS-DYDVDVIDSQSASKLVPAATEGGLHQIETAS--------------GAVLKARSIIIATGAKW 326 (521)
T ss_dssp HHHHHHH-TSCEEEECSCCEEEEECCSSTTSCEEEEETT--------------SCEEEEEEEEECCCEEE
T ss_pred HHHHHHH-HcCCEEEcCCEEEEEEeccCCCceEEEEECC--------------CCEEEcCEEEECCCCCc
Confidence 6555554 6799999999999987542 2222344432 25799999999999754
No 185
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.89 E-value=2.1e-09 Score=105.91 Aligned_cols=138 Identities=19% Similarity=0.268 Sum_probs=75.8
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHH------------HHHHHcCCccccCC-CeE
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAH------------LFLDELGIDYDEQD-NYV 172 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~------------~~l~~~Gi~~~~~~-~~~ 172 (352)
++||+|||||++|+++|+.|++. |++|+|||+.+..||.+......+.. +++..+|+++.... .+.
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~-G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~~~~~~ 84 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADE-GLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDID 84 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCCHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCCccCHH
Confidence 58999999999999999999999 99999999987887653221111211 22333555542210 110
Q ss_pred E-EechHHHHHHH---HHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccce-eccCCCCCCCCCeEEEeCEEEEccC
Q 039605 173 V-IKHAALFTSTI---MSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALV-SMNHDSQSCMDPNVMEAKVVVSSCG 247 (352)
Q Consensus 173 ~-~~~~~~~~~~L---~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~-~~~~~~~~~g~~~~i~A~~VIlAtG 247 (352)
. ......+...+ +....++.|++++.++.+. .+++.+. +...++.. .... .+++..++++|.+|+|||
T Consensus 85 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~---~~~~~v~-v~~~~g~~~~~~~---~~g~~~~i~ad~lViAtG 157 (482)
T 1ojt_A 85 MLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQF---LDPHHLE-VSLTAGDAYEQAA---PTGEKKIVAFKNCIIAAG 157 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEE---EETTEEE-EEEEEEEETTEEE---EEEEEEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEE---ccCCEEE-EEecCCccccccc---ccCcceEEEcCEEEECCC
Confidence 0 00011111111 2222335799999887543 3444432 32211100 0000 001225799999999999
Q ss_pred CCCC
Q 039605 248 HDGP 251 (352)
Q Consensus 248 ~~~~ 251 (352)
.++.
T Consensus 158 s~p~ 161 (482)
T 1ojt_A 158 SRVT 161 (482)
T ss_dssp EEEC
T ss_pred CCCC
Confidence 8753
No 186
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.88 E-value=1e-09 Score=107.60 Aligned_cols=38 Identities=26% Similarity=0.512 Sum_probs=35.1
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGA 145 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~ 145 (352)
++||+|||||++|+++|..|++. |++|+|||+.. .||.
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~-g~~V~lie~~~-~GG~ 43 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQL-GLKVLAVEAGE-VGGV 43 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSC-TTHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCeEEEEeCCC-CCCC
Confidence 68999999999999999999999 99999999987 6664
No 187
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.87 E-value=3.2e-09 Score=104.67 Aligned_cols=40 Identities=33% Similarity=0.650 Sum_probs=37.2
Q ss_pred CCccEEEECCcHHHHHHHHHHhc-CCCCcEEEEeccCCCCCC
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISK-NPNVQVAIIEQSVSPGGA 145 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~-~~G~kV~viEk~~~~GG~ 145 (352)
+++||||||||++||+||+.|++ . |++|+|+|+.+.+||.
T Consensus 9 ~~~DVvIIGaGisGLsaA~~L~k~~-G~~V~VlE~~~~~GG~ 49 (513)
T 4gde_A 9 ISVDVLVIGAGPTGLGAAKRLNQID-GPSWMIVDSNETPGGL 49 (513)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHC-CSCEEEEESSSSCCGG
T ss_pred CCCCEEEECCcHHHHHHHHHHHhhC-CCCEEEEECCCCCcCC
Confidence 46899999999999999999987 6 9999999999999985
No 188
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.85 E-value=1.1e-09 Score=107.49 Aligned_cols=38 Identities=32% Similarity=0.521 Sum_probs=34.8
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGG 144 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG 144 (352)
+|||+|||||++|+++|+.|++. |++|+||||+...||
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~-G~~V~liEk~~~~gG 40 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQL-GLKTALIEKYKGKEG 40 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHH-TCCEEEEECCBCTTS
T ss_pred cCCEEEECcCHHHHHHHHHHHhC-CCEEEEEeCCCccCC
Confidence 68999999999999999999999 999999999875443
No 189
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.84 E-value=1.2e-09 Score=106.90 Aligned_cols=38 Identities=37% Similarity=0.531 Sum_probs=34.6
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGA 145 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~ 145 (352)
++||+|||||++|+++|+.|++. |++|+|||+. ..||.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~-G~~V~liE~~-~~gG~ 40 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQL-GLSTAIVEPK-YWGGV 40 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSS-CTTHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEeCC-CCCCc
Confidence 57999999999999999999999 9999999998 55654
No 190
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.84 E-value=4e-09 Score=103.00 Aligned_cols=125 Identities=23% Similarity=0.327 Sum_probs=72.1
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHH------------HHHcCCccccCC-CeE
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLF------------LDELGIDYDEQD-NYV 172 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~------------l~~~Gi~~~~~~-~~~ 172 (352)
+|||+|||||++|+++|+.|++. |++|+|||+. ..||.+......|...+ +..+|+++.... .+.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~-g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 80 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQL-GQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDFA 80 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHT-TCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCHH
Confidence 57999999999999999999999 9999999998 66664322111122211 122344321100 000
Q ss_pred E-EechHH----HHHHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccC
Q 039605 173 V-IKHAAL----FTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCG 247 (352)
Q Consensus 173 ~-~~~~~~----~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG 247 (352)
. ..+... +...+.+.+ ++.|++++.++.+. .+.+.+ .+...++ ..++.+|.+|+|||
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~~-~~~gv~~~~g~~~~---id~~~v-~V~~~~G-------------~~~i~~d~lViATG 142 (455)
T 1ebd_A 81 KVQEWKASVVKKLTGGVEGLL-KGNKVEIVKGEAYF---VDANTV-RVVNGDS-------------AQTYTFKNAIIATG 142 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HTTTCEEEESEEEE---EETTEE-EEEETTE-------------EEEEECSEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HhCCCEEEEEEEEE---ccCCeE-EEEeCCC-------------cEEEEeCEEEEecC
Confidence 0 000111 112222333 46799999987543 344443 2333221 15799999999999
Q ss_pred CCC
Q 039605 248 HDG 250 (352)
Q Consensus 248 ~~~ 250 (352)
..+
T Consensus 143 s~p 145 (455)
T 1ebd_A 143 SRP 145 (455)
T ss_dssp EEE
T ss_pred CCC
Confidence 754
No 191
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.83 E-value=1.8e-08 Score=98.51 Aligned_cols=44 Identities=32% Similarity=0.519 Sum_probs=36.6
Q ss_pred ccCCCCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCC
Q 039605 101 MITHADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGA 145 (352)
Q Consensus 101 ~~~~~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~ 145 (352)
|+....+||+|||||++||+||+.|+++ |++|+|+|+.+.+||.
T Consensus 11 ~~~~~~~~v~iiG~G~~Gl~aa~~l~~~-g~~v~v~E~~~~~GGr 54 (478)
T 2ivd_A 11 MPRTTGMNVAVVGGGISGLAVAHHLRSR-GTDAVLLESSARLGGA 54 (478)
T ss_dssp ------CCEEEECCBHHHHHHHHHHHTT-TCCEEEECSSSSSBTT
T ss_pred CCCCCCCcEEEECCCHHHHHHHHHHHHC-CCCEEEEEcCCCCCce
Confidence 4444578999999999999999999999 9999999999998876
No 192
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.83 E-value=9e-09 Score=101.92 Aligned_cols=165 Identities=15% Similarity=0.077 Sum_probs=103.9
Q ss_pred cEEEECCcHHHHHHHHHHhcC-------------CCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEE
Q 039605 108 DVVVVGAGSAGLSCAYEISKN-------------PNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVI 174 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~-------------~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~ 174 (352)
.++|||||+.|+.+|..|++. ...+|+|||..+.+-..
T Consensus 219 ~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~----------------------------- 269 (502)
T 4g6h_A 219 SIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNM----------------------------- 269 (502)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTT-----------------------------
T ss_pred ceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccC-----------------------------
Confidence 599999999999999988753 03689999998754210
Q ss_pred echHHHHHHHHHHHHcCCCcEEEccceeEEEEEeCCEEE-EEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCC
Q 039605 175 KHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVG-GIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFG 253 (352)
Q Consensus 175 ~~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~-gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~ 253 (352)
....+.+.+.+.+. +.||++++++.+.++. ++.+. .....++ . ....+|.+|.||.|+|..+++.
T Consensus 270 -~~~~~~~~~~~~L~-~~GV~v~~~~~v~~v~--~~~~~~~~~~~dg------~----~~~~~i~ad~viwa~Gv~~~~~ 335 (502)
T 4g6h_A 270 -FEKKLSSYAQSHLE-NTSIKVHLRTAVAKVE--EKQLLAKTKHEDG------K----ITEETIPYGTLIWATGNKARPV 335 (502)
T ss_dssp -SCHHHHHHHHHHHH-HTTCEEETTEEEEEEC--SSEEEEEEECTTS------C----EEEEEEECSEEEECCCEECCHH
T ss_pred -CCHHHHHHHHHHHH-hcceeeecCceEEEEe--CCceEEEEEecCc------c----cceeeeccCEEEEccCCcCCHH
Confidence 11334344444444 6799999999999874 33332 2222211 0 0125799999999999654321
Q ss_pred CCCCCCccccc-cccccceeeccccc-ccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHH
Q 039605 254 ATGVRGMKALD-MNTAEDAIVKLTRE-IVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKS 320 (352)
Q Consensus 254 ~~g~~g~~~~~-~~~g~~~vv~~~~~-~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~ 320 (352)
...+....... ...+.+.|.+++++ ..|++|++|||+... . -++...|..+|+.+|+.|.+.
T Consensus 336 ~~~l~~~~~~~~~~~g~I~Vd~~lq~~~~~~IfAiGD~a~~~--~---p~~a~~A~qqg~~~A~ni~~~ 399 (502)
T 4g6h_A 336 ITDLFKKIPEQNSSKRGLAVNDFLQVKGSNNIFAIGDNAFAG--L---PPTAQVAHQEAEYLAKNFDKM 399 (502)
T ss_dssp HHHHHHHSGGGTTCCSSEEBCTTSBBTTCSSEEECGGGEESS--S---CCCHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHhccccccCCCceeECCccccCCCCCEEEEEcccCCC--C---CCchHHHHHHHHHHHHHHHHH
Confidence 11110011111 22355556677776 689999999998542 1 234456678899999998764
No 193
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.82 E-value=5.6e-09 Score=102.11 Aligned_cols=39 Identities=21% Similarity=0.490 Sum_probs=35.5
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCc
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGAS 146 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~ 146 (352)
++||+|||||++|+++|+.|++. |++|+|||+ ...||.+
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~-g~~V~lie~-~~~GG~~ 43 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQL-GIPTVLVEG-QALGGTC 43 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHH-TCCEEEECS-SCTTHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCEEEEEcc-CCCCCcC
Confidence 68999999999999999999999 999999999 5677654
No 194
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.82 E-value=1.1e-08 Score=100.05 Aligned_cols=38 Identities=37% Similarity=0.657 Sum_probs=35.9
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCC--cEEEEeccCCCCCC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNV--QVAIIEQSVSPGGA 145 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~--kV~viEk~~~~GG~ 145 (352)
+||+|||||++||++|++|+++ |. +|+|+|+.+.+||.
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~-G~~~~V~vlEa~~~~GG~ 42 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRA-PCPPKVVLVESSERLGGW 42 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTS-SSCCEEEEECSSSSSBTT
T ss_pred ceEEEECCcHHHHHHHHHHHhC-CCCCcEEEEeCCCCCCCc
Confidence 5999999999999999999999 99 99999999888876
No 195
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.80 E-value=1.2e-08 Score=95.24 Aligned_cols=181 Identities=13% Similarity=0.049 Sum_probs=94.9
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC-CCCCCc--ceeecchHHHHHHH-cCCccccCC--CeEEEechHH
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV-SPGGAS--GSVVRKPAHLFLDE-LGIDYDEQD--NYVVIKHAAL 179 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~-~~GG~~--~~~~~~~~~~~l~~-~Gi~~~~~~--~~~~~~~~~~ 179 (352)
.-.|+|||+|..|+-+|..|++. | +|+++.+.. ...... ...+.....+.+.+ ....+.... .+......
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~-~-~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 238 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTV-A-ETTWITQHEPAFLADDVDGRVLFERATERWKAQQEGREPDLPPGGFGDIVMV-- 238 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTT-S-EEEEECSSCCCBCCTTCCTHHHHTC----------------------CBCCC--
T ss_pred CCEEEEECCCcCHHHHHHHHHhh-C-CEEEEECCCCeecchhhcCccHHHHHHHHHhccccccCCCcccccccCcccC--
Confidence 34799999999999999999998 7 799998863 211100 00000000011111 000000000 00000001
Q ss_pred HHHHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCC
Q 039605 180 FTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRG 259 (352)
Q Consensus 180 ~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g 259 (352)
..+.+... .++ +.....+.++. .. ++.+.+ ..++.+|.||+|+|..+.... ..
T Consensus 239 --~~~~~~~~--~g~-i~~~~~v~~~~--~~---~v~~~~--------------g~~i~~D~vi~a~G~~p~~~~---l~ 291 (357)
T 4a9w_A 239 --PPVLDARA--RGV-LAAVPPPARFS--PT---GMQWAD--------------GTERAFDAVIWCTGFRPALSH---LK 291 (357)
T ss_dssp --HHHHHHHH--TTC-CCEECCCSEEE--TT---EEECTT--------------SCEEECSEEEECCCBCCCCGG---GT
T ss_pred --hhHHHHHh--cCc-eEEecCcceEe--CC---eeEECC--------------CCEecCCEEEECCCcCCCCcc---cC
Confidence 11122222 233 33333444432 22 233322 268999999999997654332 12
Q ss_pred ccccccccccceeecc--cccccCceeEecc--hhhhhcCCCCCCcchhhhhhchHHHHHHHHHHcCC
Q 039605 260 MKALDMNTAEDAIVKL--TREIVPGMIVAGM--EVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQ 323 (352)
Q Consensus 260 ~~~~~~~~g~~~vv~~--~~~~~pg~~~aG~--~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~l~~ 323 (352)
..++..+.+...+.++ ..+..|++|++|| +... .++ ....+..+|+.+|..|.++|++
T Consensus 292 ~~gl~~~~G~i~vd~~~l~~t~~~~vya~Gd~d~~~~---~~~---~~~~A~~~g~~~a~~i~~~l~g 353 (357)
T 4a9w_A 292 GLDLVTPQGQVEVDGSGLRALAVPSVWLLGYGDWNGM---ASA---TLIGVTRYAREAVRQVTAYCAD 353 (357)
T ss_dssp TTTCBCTTSCBCBCTTSCBBSSCTTEEECSSCGGGST---TCS---STTTHHHHHHHHHHHHHHHTC-
T ss_pred cccccCCCCCccccCCcccCCCCCCeEEecccccccc---chh---hhhhhHHHHHHHHHHHHHHHHh
Confidence 2223334566566666 6789999999994 4431 112 2234578999999999999987
No 196
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.79 E-value=1.1e-07 Score=89.58 Aligned_cols=173 Identities=13% Similarity=0.197 Sum_probs=103.6
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
-.|+|||+|..|+-+|..|++. |.+|+++++.+.... .. ++.. + .......+.+.+
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~-g~~V~lv~~~~~~~~--------------~~----~d~~--~---~~~~~~~~~l~~ 222 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKN-GSDIALYTSTTGLND--------------PD----ADPS--V---RLSPYTRQRLGN 222 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEECC----------------------------CT--T---SCCHHHHHHHHH
T ss_pred CEEEEECCCcCHHHHHHHHHhc-CCeEEEEecCCCCCC--------------CC----CCCC--c---cCCHHHHHHHHH
Confidence 3799999999999999999999 999999998753210 00 0000 0 001223334444
Q ss_pred HHHcCCC-cEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEE-EeCEEEEccCCCCCCCCCCCCCccccc
Q 039605 187 KLLARPN-VKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVM-EAKVVVSSCGHDGPFGATGVRGMKALD 264 (352)
Q Consensus 187 ~~~~~~g-v~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i-~A~~VIlAtG~~~~~~~~g~~g~~~~~ 264 (352)
.+. +.| ++++.++.+.++..+++.+ .+.+.+| .++ .+|.||+|+|..+.... +. ...+.
T Consensus 223 ~l~-~~g~v~~~~~~~v~~i~~~~~~~-~v~~~~g--------------~~~~~~d~vi~a~G~~~~~~~--~~-~~~~~ 283 (369)
T 3d1c_A 223 VIK-QGARIEMNVHYTVKDIDFNNGQY-HISFDSG--------------QSVHTPHEPILATGFDATKNP--IV-QQLFV 283 (369)
T ss_dssp HHH-TTCCEEEECSCCEEEEEEETTEE-EEEESSS--------------CCEEESSCCEECCCBCGGGSH--HH-HHHSC
T ss_pred HHh-hCCcEEEecCcEEEEEEecCCce-EEEecCC--------------eEeccCCceEEeeccCCccch--hh-hhhcc
Confidence 443 566 9999999999997666543 3444332 234 45999999996543211 01 11122
Q ss_pred cccccceeecc-cccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHHcCCCC
Q 039605 265 MNTAEDAIVKL-TREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPN 325 (352)
Q Consensus 265 ~~~g~~~vv~~-~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~l~~~~ 325 (352)
.+.+...+.+. ..+..|++|++||+..... .... ....+..++..+|..+...+..+.
T Consensus 284 ~~~g~i~v~~~~~~t~~~~v~a~GD~~~~~~--~~~~-~~~~~~~~a~~~a~~l~~~~~~p~ 342 (369)
T 3d1c_A 284 TTNQDIKLTTHDESTRYPNIFMIGATVENDN--AKLC-YIYKFRARFAVLAHLLTQREGLPA 342 (369)
T ss_dssp CTTSCCCBCTTSBBSSSTTEEECSTTCCCSS--CCCC-SHHHHGGGHHHHHHHHHHHTTCCC
T ss_pred CCCCCEEechhhcccCCCCeEEeccccccCC--eeEE-EEehhhHHHHHHHHHHhcccCCCC
Confidence 23344444443 4568899999999875422 1111 122335568888988888876554
No 197
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.78 E-value=1.1e-08 Score=103.83 Aligned_cols=40 Identities=30% Similarity=0.444 Sum_probs=36.2
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCC
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGA 145 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~ 145 (352)
.+|||||||||++|+.+|+.|++. |++|+|||+....||.
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~-G~~V~liE~~~~~gg~ 84 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGA-GYKVAMFDIGEIDSGL 84 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSCCCSSS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhC-CCcEEEEeccCCCCCc
Confidence 368999999999999999999999 9999999999877753
No 198
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.78 E-value=8.7e-09 Score=102.51 Aligned_cols=41 Identities=20% Similarity=0.292 Sum_probs=37.6
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCc
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGAS 146 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~ 146 (352)
.++||+|||||++|+++|+.|++. |++|+|||+....||.+
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~-G~~V~liE~~~~~GG~~ 82 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAM-GGRQLIVDRWPFLGGSC 82 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSSSSCHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCCCCCCcc
Confidence 468999999999999999999999 99999999998777764
No 199
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.77 E-value=3.5e-09 Score=104.19 Aligned_cols=40 Identities=25% Similarity=0.492 Sum_probs=35.9
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCc
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGAS 146 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~ 146 (352)
.++||+|||||++|+++|+.|++. |++|+|||++ ..||.+
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~-g~~V~liE~~-~~GG~~ 49 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASY-GAKTLLVEAK-ALGGTC 49 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-SCCEEEEESS-CTTHHH
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHC-CCcEEEEeCC-CcCCcC
Confidence 368999999999999999999999 9999999997 566653
No 200
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.77 E-value=2.8e-09 Score=104.07 Aligned_cols=40 Identities=28% Similarity=0.528 Sum_probs=36.7
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCc
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGAS 146 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~ 146 (352)
+|||+|||||++|+++|+.|++. |++|+|||+.+.+||.+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~-g~~V~lie~~~~~GG~~ 40 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQL-GMKVGVVEKEKALGGTC 40 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSSSSSHHH
T ss_pred CCCEEEECCChhHHHHHHHHHHC-CCeEEEEeCCCCCCCcc
Confidence 37999999999999999999999 99999999998888763
No 201
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.77 E-value=8.4e-08 Score=94.35 Aligned_cols=39 Identities=26% Similarity=0.503 Sum_probs=36.8
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGA 145 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~ 145 (352)
++||+|||||++||+||+.|++. |++|+|+|+.+.+||.
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~-g~~v~v~E~~~~~GGr 77 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVA-GFKTLLLEARDRIGGR 77 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHT-TCCEEEECSSSBSBTT
T ss_pred CCCEEEECCcHHHHHHHHHHHHC-CCCEEEEeCCCCCCCc
Confidence 47999999999999999999999 9999999999988875
No 202
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.77 E-value=5.1e-08 Score=96.66 Aligned_cols=39 Identities=33% Similarity=0.573 Sum_probs=36.7
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGA 145 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~ 145 (352)
++||+|||||++||+||+.|++. |++|+|+|+.+.+||.
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~-G~~V~vlE~~~~~GGr 42 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDS-GLNVVVLEARDRVGGR 42 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHT-TCCEEEECSSSSSBTT
T ss_pred CceEEEECCCHHHHHHHHHHHHC-CCCEEEEeCCCCCCCc
Confidence 57999999999999999999999 9999999999988875
No 203
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.75 E-value=5.1e-08 Score=103.74 Aligned_cols=124 Identities=23% Similarity=0.250 Sum_probs=78.9
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHH
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIM 185 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~ 185 (352)
++||||||+|++|++||+.|++. |++|+|||+.+.+||.+... + ...+ .. ....++...+.
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~-G~~V~lie~~~~~GG~~~~~---~--------k~~i---~~----~~~~~~~~~~~ 188 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRS-GARVMLLDERAEAGGTLLDT---A--------GEQI---DG----MDSSAWIEQVT 188 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSSGGGGGS---S--------CCEE---TT----EEHHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCcEEEEeCCCCCCceeccC---C--------cccc---CC----CCHHHHHHHHH
Confidence 68999999999999999999999 99999999998888643210 0 0000 00 11334445556
Q ss_pred HHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCC-CCCCCCeEEEeCEEEEccCCC
Q 039605 186 SKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDS-QSCMDPNVMEAKVVVSSCGHD 249 (352)
Q Consensus 186 ~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~-~~~g~~~~i~A~~VIlAtG~~ 249 (352)
+++.+..+++++.++.|..+.. ++.+..+......+.+.... ...++..++.+|.||+|||..
T Consensus 189 ~~l~~~~~v~~~~~~~V~~i~~-~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~ 252 (965)
T 2gag_A 189 SELAEAEETTHLQRTTVFGSYD-ANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAH 252 (965)
T ss_dssp HHHHHSTTEEEESSEEEEEEET-TTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEE
T ss_pred HHHhhcCCcEEEeCCEEEeeec-CCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCc
Confidence 6666556999999999988763 34444333211111111100 000112479999999999974
No 204
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.74 E-value=2.7e-08 Score=105.82 Aligned_cols=155 Identities=14% Similarity=0.147 Sum_probs=105.6
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
-.|+|||+|..|+.+|..|++. |.+|+|||+.+.+. .. .+
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~-G~~Vtvv~~~~~~~----------------------------------~~-----~~ 324 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAAT-GGVVAVIDARSSIS----------------------------------AA-----AA 324 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGG-TCCSEEEESCSSCC----------------------------------HH-----HH
T ss_pred CeEEEEcCCHHHHHHHHHHHHc-CCcEEEEECCCccc----------------------------------hh-----HH
Confidence 4799999999999999999999 99999999986431 00 22
Q ss_pred HHHcCCCcEEEccceeEEEEEe-CCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCcccccc
Q 039605 187 KLLARPNVKLFNAVAAEDLIVK-GNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDM 265 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~-~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~ 265 (352)
.+. +.||++++++.+.++..+ ++++.++.+.+. +.. +.+|+..++.+|.||+|+|..+.... +..
T Consensus 325 ~l~-~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~----~~~-~~~G~~~~i~~D~Vv~a~G~~P~~~l--------~~~ 390 (965)
T 2gag_A 325 QAV-ADGVQVISGSVVVDTEADENGELSAIVVAEL----DEA-RELGGTQRFEADVLAVAGGFNPVVHL--------HSQ 390 (965)
T ss_dssp HHH-HTTCCEEETEEEEEEEECTTSCEEEEEEEEE----CTT-CCEEEEEEEECSEEEEECCEEECCHH--------HHH
T ss_pred HHH-hCCeEEEeCCEeEEEeccCCCCEEEEEEEec----ccc-CCCCceEEEEcCEEEECCCcCcChHH--------HHh
Confidence 233 569999999999999875 566767766420 000 00012368999999999996433211 111
Q ss_pred ccccceeecccc-----cccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHHcCC
Q 039605 266 NTAEDAIVKLTR-----EIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQ 323 (352)
Q Consensus 266 ~~g~~~vv~~~~-----~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~l~~ 323 (352)
..+...+.++.+ +..|++|++||+.... + +..++.+|+.||..|..+|..
T Consensus 391 ~~g~i~vd~~~~~~v~~ts~p~IyAaGD~a~~~------~--l~~A~~~G~~aA~~i~~~lg~ 445 (965)
T 2gag_A 391 RQGKLDWDTTIHAFVPADAVANQHLAGAMTGRL------D--TASALSTGAATGAAAATAAGF 445 (965)
T ss_dssp TTCCEEEETTTTEEEECSCCTTEEECGGGGTCC------S--HHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCcEEEcCcccccccCCCCCCEEEEEecCCch------h--HHHHHHHHHHHHHHHHHHcCC
Confidence 112222233333 6789999999997531 1 235688999999999999854
No 205
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.74 E-value=2.5e-08 Score=97.67 Aligned_cols=39 Identities=31% Similarity=0.584 Sum_probs=35.6
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCc
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGAS 146 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~ 146 (352)
++||+|||||++|+++|++|++. |++|+|||+. ..||.+
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~-g~~V~lie~~-~~GG~~ 42 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQ-GAQVTLIERG-TIGGTC 42 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESS-STTHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCEEEEEeCC-CCCccc
Confidence 68999999999999999999999 9999999998 567653
No 206
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.74 E-value=4.4e-09 Score=103.35 Aligned_cols=40 Identities=33% Similarity=0.556 Sum_probs=35.7
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCc
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGAS 146 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~ 146 (352)
.+|||+|||||++|+++|+.|++. |++|+|||+. ..||.+
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~-G~~V~liE~~-~~GG~~ 58 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAEL-GARAAVVESH-KLGGTC 58 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHT-TCCEEEEESS-CTTHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-CCeEEEEecC-CCCCcc
Confidence 468999999999999999999999 9999999987 566653
No 207
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.73 E-value=1e-07 Score=93.21 Aligned_cols=196 Identities=19% Similarity=0.166 Sum_probs=109.0
Q ss_pred ccEEEECCcHHHHHHHHHHhcC-------------------CC-CcEEEEeccCCCCCCcceeecchHHHHHHHc-CCc-
Q 039605 107 TDVVVVGAGSAGLSCAYEISKN-------------------PN-VQVAIIEQSVSPGGASGSVVRKPAHLFLDEL-GID- 164 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~-------------------~G-~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~-Gi~- 164 (352)
-.|+|||+|..|+-+|..|++. .| .+|+||++....... +. ...+.++ +++
T Consensus 148 ~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~----f~---~~elrel~~lp~ 220 (456)
T 1lqt_A 148 ARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAA----FT---TLELRELADLDG 220 (456)
T ss_dssp SEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCC----CC---HHHHHHGGGCTT
T ss_pred CEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhc----cC---hHHHHHhhcCCC
Confidence 4799999999999999999872 14 489999987533110 11 1112221 111
Q ss_pred --cccC-CCeE--E-------EechHHHHHHHHHHHHcC-----CCcEEEccceeEEEEEeCCEEEEEEEcccceeccCC
Q 039605 165 --YDEQ-DNYV--V-------IKHAALFTSTIMSKLLAR-----PNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHD 227 (352)
Q Consensus 165 --~~~~-~~~~--~-------~~~~~~~~~~L~~~~~~~-----~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~ 227 (352)
+... ..+. . ........+.|.+.+.+. .|+++++++.+.++..+ +++.++.+......-+..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~-~~v~~v~~~~~~~~~~~~ 299 (456)
T 1lqt_A 221 VDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGK-RKVERIVLGRNELVSDGS 299 (456)
T ss_dssp EEEECCGGGGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECS-SSCCEEEEEEEEEEECSS
T ss_pred ceeeeChHHhccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecC-CcEeEEEEEEEEecCCCc
Confidence 0000 0000 0 000011123333333322 68999999999998764 455555553210000000
Q ss_pred ----CCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCccccccc-cccceeecccc-cccCceeEecchhhhhcCCCCCCc
Q 039605 228 ----SQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDMN-TAEDAIVKLTR-EIVPGMIVAGMEVAEIDGAPRMGP 301 (352)
Q Consensus 228 ----~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~~-~g~~~vv~~~~-~~~pg~~~aG~~~~~~~g~~r~g~ 301 (352)
...+|+..++.++.||.|+|..+.. ..+ +..+ .+...+.++.+ +..|++|++||+..... +
T Consensus 300 ~~~~~~~~g~~~~i~~d~vi~a~G~~p~~-l~g------l~~d~~g~i~vn~~~rvt~~pgvya~GD~~~gp~-----~- 366 (456)
T 1lqt_A 300 GRVAAKDTGEREELPAQLVVRSVGYRGVP-TPG------LPFDDQSGTIPNVGGRINGSPNEYVVGWIKRGPT-----G- 366 (456)
T ss_dssp SSEEEEEEEEEEEEECSEEEECSCEECCC-CTT------SCCBTTTTBCCEETTEETTCSSEEECTHHHHCSC-----S-
T ss_pred ccccccCCCceEEEEcCEEEEccccccCC-CCC------CcccCCCCeeECCCCcCCCCCCEEEEeccCCCCc-----h-
Confidence 0001234679999999999976543 222 2222 23334445555 57899999999985321 1
Q ss_pred chhhhhhchHHHHHHHHHHcCC
Q 039605 302 TFGAMMISGQKAAHLALKSLGQ 323 (352)
Q Consensus 302 ~~~~~~~sG~~aA~~i~~~l~~ 323 (352)
..+.++.+|..+|..|+.+|..
T Consensus 367 ~i~~a~~~g~~~a~~i~~~l~~ 388 (456)
T 1lqt_A 367 VIGTNKKDAQDTVDTLIKNLGN 388 (456)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHh
Confidence 2334578999999999998854
No 208
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.72 E-value=5.1e-08 Score=95.46 Aligned_cols=40 Identities=18% Similarity=0.321 Sum_probs=36.9
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCC
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGA 145 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~ 145 (352)
.+|||+|||+|++|+++|+.|++. |++|+||||++..||.
T Consensus 19 ~~~dv~iiG~G~~g~~~a~~l~~~-g~~v~~~e~~~~~Gg~ 58 (475)
T 3p1w_A 19 EHYDVIILGTGLKECILSGLLSHY-GKKILVLDRNPYYGGE 58 (475)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCGG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHC-CCcEEEEeccCCCCCC
Confidence 368999999999999999999999 9999999999887764
No 209
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.72 E-value=9.5e-09 Score=101.41 Aligned_cols=40 Identities=35% Similarity=0.660 Sum_probs=35.5
Q ss_pred CccEEEECCcHHHHHHHHHHhc-CCCCcEEEEe--------ccCCCCCCc
Q 039605 106 DTDVVVVGAGSAGLSCAYEISK-NPNVQVAIIE--------QSVSPGGAS 146 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~-~~G~kV~viE--------k~~~~GG~~ 146 (352)
+|||+|||||++|+++|++|++ . |++|+||| +....||.+
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~-G~~V~liE~~~~~~~~~~~~~GG~c 51 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLH-KKRVAVIDLQKHHGPPHYAALGGTC 51 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHH-CCCEEEEESCSSSBTTTBSCTTCHH
T ss_pred cccEEEECCCHHHHHHHHHHHHHc-CCEEEEEecccccccccCCCcCccc
Confidence 6899999999999999999999 9 99999999 345677754
No 210
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.71 E-value=1.5e-07 Score=91.96 Aligned_cols=39 Identities=28% Similarity=0.572 Sum_probs=36.2
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCC--CcEEEEeccCCCCCC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPN--VQVAIIEQSVSPGGA 145 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G--~kV~viEk~~~~GG~ 145 (352)
.+||+|||||++|+++|+.|+++ | ++|+|+|+.+.+||.
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~-g~~~~v~v~E~~~~~GG~ 44 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERA-FPDLNITLLEAGERLGGK 44 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHH-CTTSEEEEECSSSSSBTT
T ss_pred cccEEEECCCHHHHHHHHHHHHh-CCCCCEEEEECCCCCCce
Confidence 57999999999999999999999 8 999999998888774
No 211
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.71 E-value=1.3e-08 Score=102.06 Aligned_cols=37 Identities=46% Similarity=0.688 Sum_probs=33.2
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSP 142 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~ 142 (352)
+||+||||||.+|+.+|.+|++.++.+|+|||+++..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 5899999999999999999999449999999998643
No 212
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.70 E-value=7.8e-09 Score=98.49 Aligned_cols=117 Identities=15% Similarity=0.077 Sum_probs=73.9
Q ss_pred cEEEECCcHHHHHHHHHHhcC-CCCcEEEEeccCCC---CCCccee---ec---ch-HH-HH-HHHc------------C
Q 039605 108 DVVVVGAGSAGLSCAYEISKN-PNVQVAIIEQSVSP---GGASGSV---VR---KP-AH-LF-LDEL------------G 162 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~-~G~kV~viEk~~~~---GG~~~~~---~~---~~-~~-~~-l~~~------------G 162 (352)
||+|||||++|+++|+.|++. +|++|+||||.+.+ |.+.... .. .. .. +. +... |
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 81 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVHHN 81 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEESS
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEeCC
Confidence 899999999999999999984 48999999998765 3221110 00 00 00 00 0000 1
Q ss_pred CccccC-CCeEEEechHHHHHHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCE
Q 039605 163 IDYDEQ-DNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKV 241 (352)
Q Consensus 163 i~~~~~-~~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~ 241 (352)
..+... +......+..++.+.|.+.+.+ .|++++++++|+++... .++.+|.
T Consensus 82 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~-~gv~i~~~~~v~~i~~~--------------------------~~~~ad~ 134 (381)
T 3c4a_A 82 EPSLMSTGVLLCGVERRGLVHALRDKCRS-QGIAIRFESPLLEHGEL--------------------------PLADYDL 134 (381)
T ss_dssp SEEECCCCSCEEEEEHHHHHHHHHHHHHH-TTCEEETTCCCCSGGGC--------------------------CGGGCSE
T ss_pred eeEEecCCCceeeecHHHHHHHHHHHHHH-CCCEEEeCCEeccchhc--------------------------ccccCCE
Confidence 111111 1112345667888888888874 49999999877665310 1256899
Q ss_pred EEEccCCCCC
Q 039605 242 VVSSCGHDGP 251 (352)
Q Consensus 242 VIlAtG~~~~ 251 (352)
||.|+|.++.
T Consensus 135 vV~AdG~~S~ 144 (381)
T 3c4a_A 135 VVLANGVNHK 144 (381)
T ss_dssp EEECCGGGGG
T ss_pred EEECCCCCch
Confidence 9999998764
No 213
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.70 E-value=8.3e-09 Score=102.09 Aligned_cols=39 Identities=36% Similarity=0.666 Sum_probs=35.2
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCc
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGAS 146 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~ 146 (352)
+|||+|||||++|+++|+.|++. |++|+|||++. .||.+
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~-g~~V~liE~~~-~GG~c 40 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARH-NAKVALVEKSR-LGGTC 40 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT-TCCEEEEESSS-TTHHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHC-CCcEEEEeCCC-cCccc
Confidence 58999999999999999999999 99999999984 66653
No 214
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.69 E-value=3e-08 Score=97.17 Aligned_cols=115 Identities=17% Similarity=0.187 Sum_probs=61.9
Q ss_pred ccEEEECCcHHHHHHHHHHhcC-CCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHH-----
Q 039605 107 TDVVVVGAGSAGLSCAYEISKN-PNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALF----- 180 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~-~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~----- 180 (352)
.||+|||||++|+++|+.|++. +|.+|+|||+.+..+.. ..++++...+.+. ....+
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~--------------~~gl~~~~~g~~~---~~~~~~~~~~ 66 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYG--------------GCGIPYYVSGEVS---NIESLQATPY 66 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC----------------------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccccc--------------ccccchhhcCCCC---chHHhccccc
Confidence 5999999999999999999974 37999999998765311 0111110000000 00000
Q ss_pred -HHHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 181 -TSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 181 -~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
.....+.+.++.+++++.+++|+.+..++..+. +... .+ ++..++.+|.+|+|||...
T Consensus 67 ~~~~~~~~~~~~~gi~~~~~~~V~~id~~~~~v~-~~~~--------~~---g~~~~~~~d~lviAtG~~p 125 (472)
T 3iwa_A 67 NVVRDPEFFRINKDVEALVETRAHAIDRAAHTVE-IENL--------RT---GERRTLKYDKLVLALGSKA 125 (472)
T ss_dssp --------------CEEECSEEEEEEETTTTEEE-EEET--------TT---CCEEEEECSEEEECCCEEE
T ss_pred hhccCHHHHhhhcCcEEEECCEEEEEECCCCEEE-Eeec--------CC---CCEEEEECCEEEEeCCCCc
Confidence 111122333356899999999999987666543 2210 01 1235899999999999743
No 215
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.69 E-value=7.8e-08 Score=93.75 Aligned_cols=112 Identities=16% Similarity=0.263 Sum_probs=69.0
Q ss_pred ccEEEECCcHHHHHHHHHHhcC-CCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKN-PNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIM 185 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~-~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~ 185 (352)
.||+|||||++|+++|+.|++. +|.+|+|||+.+..|....... .++. + .+. ...++...+.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~-----~~~~--~-~~~---------~~~~~~~~~~ 65 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLS-----AYFN--H-TIN---------ELHEARYITE 65 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC---------------------------------CCCCH
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccch-----hhhc--C-CCC---------CHHHhhcCCH
Confidence 4999999999999999999984 3799999999987663111000 0000 0 000 0000000011
Q ss_pred HHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 186 SKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 186 ~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
+.+. +.+++++.+++|..+..++..+. +.... +..++.+|.+|+|||...
T Consensus 66 ~~~~-~~gi~~~~~~~V~~id~~~~~v~-v~~~~-------------~~~~~~~d~lviAtG~~p 115 (452)
T 3oc4_A 66 EELR-RQKIQLLLNREVVAMDVENQLIA-WTRKE-------------EQQWYSYDKLILATGASQ 115 (452)
T ss_dssp HHHH-HTTEEEECSCEEEEEETTTTEEE-EEETT-------------EEEEEECSEEEECCCCCB
T ss_pred HHHH-HCCCEEEECCEEEEEECCCCEEE-EEecC-------------ceEEEEcCEEEECCCccc
Confidence 2222 46899999999999887666543 22111 236899999999999854
No 216
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.67 E-value=4.8e-08 Score=96.41 Aligned_cols=39 Identities=28% Similarity=0.513 Sum_probs=35.6
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCc
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGAS 146 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~ 146 (352)
+|||+|||||++|+++|+.|++. |++|+|||++. .||.+
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~-G~~V~liE~~~-~GGtc 46 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKH-TDKVVLIEGGA-YGTTC 46 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT-CSCEEEEESSC-SSCHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhC-CCcEEEEeCCC-CCCcc
Confidence 58999999999999999999999 99999999975 77754
No 217
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.67 E-value=8.5e-09 Score=101.91 Aligned_cols=40 Identities=33% Similarity=0.594 Sum_probs=35.0
Q ss_pred CccEEEECCcHHHHHHHHHHhc-CCCCcEEEEe--------ccCCCCCCc
Q 039605 106 DTDVVVVGAGSAGLSCAYEISK-NPNVQVAIIE--------QSVSPGGAS 146 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~-~~G~kV~viE--------k~~~~GG~~ 146 (352)
+|||+|||||++|+++|+.|++ . |++|+||| +....||.+
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~-G~~V~liE~~~~~~~~~~~~~GG~~ 55 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLY-GKRVAVVDVQTSHGPPFYAALGGTC 55 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHH-CCCEEEEESCSSSBTTTBCBTTHHH
T ss_pred ccCEEEECCChhHHHHHHHHHHhc-CCeEEEEecccccccccCCCCCCee
Confidence 5899999999999999999999 9 99999999 344667653
No 218
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.66 E-value=1.1e-08 Score=101.02 Aligned_cols=39 Identities=36% Similarity=0.588 Sum_probs=34.7
Q ss_pred CccEEEECCcHHHHHHHHHHhcC-C-CCcEEEEeccCCCCCC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKN-P-NVQVAIIEQSVSPGGA 145 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~-~-G~kV~viEk~~~~GG~ 145 (352)
+|||+|||||++|+++|+.|++. + |++|+|||+.. .||.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~ 42 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGA 42 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCc
Confidence 57999999999999999999985 2 89999999987 7765
No 219
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.65 E-value=3.4e-08 Score=96.18 Aligned_cols=111 Identities=18% Similarity=0.196 Sum_probs=65.3
Q ss_pred CccEEEECCcHHHHHHHHHHhcC-CCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHH
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKN-PNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTI 184 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~-~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L 184 (352)
.+||+|||||++|+++|+.|++. +|.+|+|||+.+..+... .++++...+ . ....++....
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~--------------~~~p~~~~~-~---~~~~~~~~~~ 64 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAP--------------CGIPYVVEG-L---STPDKLMYYP 64 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC-----------------------------------------
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCC--------------cCCccccCC-C---CCHHHhhhcC
Confidence 46999999999999999999984 378999999998665321 011110000 0 0011111112
Q ss_pred HHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 185 MSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 185 ~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
.+.+.++.+++++.++++..+..++. .+...+ ...++.+|.+|+|||..+
T Consensus 65 ~~~~~~~~gi~v~~~~~v~~i~~~~~---~v~~~~-------------g~~~~~~d~lviAtG~~p 114 (449)
T 3kd9_A 65 PEVFIKKRGIDLHLNAEVIEVDTGYV---RVRENG-------------GEKSYEWDYLVFANGASP 114 (449)
T ss_dssp -CTHHHHTTCEEETTCEEEEECSSEE---EEECSS-------------SEEEEECSEEEECCCEEE
T ss_pred HHHHHHhcCcEEEecCEEEEEecCCC---EEEECC-------------ceEEEEcCEEEECCCCCC
Confidence 22332356899999999888754321 122211 125799999999999753
No 220
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.65 E-value=1.8e-08 Score=98.75 Aligned_cols=39 Identities=33% Similarity=0.566 Sum_probs=35.5
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCc
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGAS 146 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~ 146 (352)
++||+|||||++|+++|++|++. |++|+|||+. ..||.+
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~-g~~V~liE~~-~~GG~~ 42 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAF-GKRVALIESK-ALGGTC 42 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESS-CTTHHH
T ss_pred cCcEEEECCCHHHHHHHHHHHhC-CCcEEEEcCC-CCCCcC
Confidence 68999999999999999999999 9999999998 566653
No 221
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.64 E-value=1.5e-07 Score=90.01 Aligned_cols=109 Identities=14% Similarity=0.181 Sum_probs=71.0
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHH
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTI 184 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L 184 (352)
....|+|||||++|+.||..|.+. +.+|+|||+.+..+.. +.+...++.. ..+... + .....
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~-~~~itlie~~~~~~y~-----~~~l~~~l~g-~~~~~~---l--~~~~~------ 69 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGK-CDDITMINSEKYLPYY-----RPRLNEIIAK-NKSIDD---I--LIKKN------ 69 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTT-CSCEEEECSSSSCCBC-----GGGHHHHHHS-CCCGGG---T--BSSCH------
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCC-CCEEEEEECCCCCCcc-----cChhhHHHcC-CCCHHH---c--cCCCH------
Confidence 356899999999999999999767 9999999998765421 1111222211 111110 0 00111
Q ss_pred HHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 185 MSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 185 ~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
+.+ ++.+++++.+++|+.+..++.. +.+.+ ..++.+|.+|+|||...
T Consensus 70 -~~~-~~~~i~~~~~~~V~~id~~~~~---v~~~~--------------g~~~~yd~lvlAtG~~p 116 (385)
T 3klj_A 70 -DWY-EKNNIKVITSEFATSIDPNNKL---VTLKS--------------GEKIKYEKLIIASGSIA 116 (385)
T ss_dssp -HHH-HHTTCEEECSCCEEEEETTTTE---EEETT--------------SCEEECSEEEECCCEEE
T ss_pred -HHH-HHCCCEEEeCCEEEEEECCCCE---EEECC--------------CCEEECCEEEEecCCCc
Confidence 111 2468999999999999876654 33432 25899999999999743
No 222
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.63 E-value=1.4e-08 Score=99.15 Aligned_cols=39 Identities=26% Similarity=0.480 Sum_probs=35.4
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCc
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGAS 146 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~ 146 (352)
++||+|||||++|+++|++|++. |++|+|||++ ..||.+
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~-g~~V~liE~~-~~GG~~ 42 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMY-GQKCALIEAK-ELGGTC 42 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT-TCCEEEEESS-CTTHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhC-CCeEEEEcCC-CCCCcc
Confidence 58999999999999999999999 9999999998 566653
No 223
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.63 E-value=3.9e-08 Score=97.30 Aligned_cols=132 Identities=13% Similarity=0.092 Sum_probs=78.3
Q ss_pred CCccEEEECCcHHHHHHHHHHhcC-------------CCCcEEEEeccCCCCCC---------ccee-------ecch--
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKN-------------PNVQVAIIEQSVSPGGA---------SGSV-------VRKP-- 153 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~-------------~G~kV~viEk~~~~GG~---------~~~~-------~~~~-- 153 (352)
.-|||||||+||+||++|+.|.+. ++.+++.+|+.+..+-. +... +..|
T Consensus 38 ~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~s 117 (501)
T 4b63_A 38 ELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPRS 117 (501)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTTC
T ss_pred CcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCCC
Confidence 358999999999999999999764 13467788887644311 0000 0011
Q ss_pred ---HHHHHHHcCC--ccc-cCCCeEEEechHHHHHHHHHHHHcCCCcEEEccceeEEEEEeCC-------EEEEEEEccc
Q 039605 154 ---AHLFLDELGI--DYD-EQDNYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGN-------RVGGIVTNWA 220 (352)
Q Consensus 154 ---~~~~l~~~Gi--~~~-~~~~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g-------~v~gv~~~~g 220 (352)
...+|.+.|- +|. +...| ....++...|...+. +.+..+.++++|+++...+. ..+-|.+.++
T Consensus 118 ~~sf~~yl~~~~rl~~f~~~~~~~---p~r~E~~~Yl~~~A~-~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~ 193 (501)
T 4b63_A 118 SFTFLNYLHQKGRLIHFTNLSTFL---PARLEFEDYMRWCAQ-QFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNV 193 (501)
T ss_dssp TTSHHHHHHHHTCHHHHHTTCCSC---CBHHHHHHHHHHHHH-TTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEET
T ss_pred ccchHHHHHHhCCccCCccccCCC---CCHHHHHHHHHHHHH-HcCCceEcceEEEeeccccccccccccceEEEEEecC
Confidence 2344444442 111 11112 123455555444443 55677899999999987642 2344555332
Q ss_pred ceeccCCCCCCCCCeEEEeCEEEEccCCC
Q 039605 221 LVSMNHDSQSCMDPNVMEAKVVVSSCGHD 249 (352)
Q Consensus 221 ~~~~~~~~~~~g~~~~i~A~~VIlAtG~~ 249 (352)
..++..++.|+.||+|+|..
T Consensus 194 ---------~~g~~~~~~ar~vVlatG~~ 213 (501)
T 4b63_A 194 ---------ETGEISARRTRKVVIAIGGT 213 (501)
T ss_dssp ---------TTCCEEEEEEEEEEECCCCE
T ss_pred ---------CCceEEEEEeCEEEECcCCC
Confidence 22356789999999999964
No 224
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=98.62 E-value=1.9e-08 Score=100.32 Aligned_cols=35 Identities=29% Similarity=0.486 Sum_probs=32.3
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCC
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVS 141 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~ 141 (352)
.+||+||||+|.+|+.+|.+|++ |.+|+|||++..
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse--g~~VlvLEaG~~ 59 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE--KYKVLVLERGSL 59 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT--TSCEEEECSSBC
T ss_pred CcccEEEECccHHHHHHHHHHhc--CCcEEEEecCCC
Confidence 36999999999999999999998 899999999854
No 225
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.61 E-value=2.7e-08 Score=97.35 Aligned_cols=99 Identities=19% Similarity=0.128 Sum_probs=67.5
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHH
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTI 184 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L 184 (352)
..+||+|||||++|+++|+.|++. |++|+|||+.+.+||. -.+|++... ...++....
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~-G~~V~v~e~~~~~GG~-------------l~~gip~~~--------~~~~~~~~~ 178 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAK-GYEVHVYDRYDRMGGL-------------LVYGIPGFK--------LEKSVVERR 178 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHH-TCCEEEECSSSSCSTH-------------HHHTSCTTT--------SCHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeccCCCCCe-------------eeecCCCcc--------CCHHHHHHH
Confidence 467999999999999999999999 9999999999888873 123443211 012333444
Q ss_pred HHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 185 MSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 185 ~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
.+.+. +.|+++++++.+.. . +.+.+ ..+.+|.||+|+|.+.
T Consensus 179 ~~~l~-~~gv~~~~~~~v~~------~---v~~~~---------------~~~~~d~vvlAtG~~~ 219 (456)
T 2vdc_G 179 VKLLA-DAGVIYHPNFEVGR------D---ASLPE---------------LRRKHVAVLVATGVYK 219 (456)
T ss_dssp HHHHH-HTTCEEETTCCBTT------T---BCHHH---------------HHSSCSEEEECCCCCE
T ss_pred HHHHH-HCCcEEEeCCEecc------E---EEhhH---------------hHhhCCEEEEecCCCC
Confidence 44444 56999999875420 0 11111 2356899999999863
No 226
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.60 E-value=1.8e-06 Score=84.10 Aligned_cols=174 Identities=12% Similarity=0.144 Sum_probs=91.8
Q ss_pred CccEEEECCcHHHHHHHHHHhcC-CCCcEEEEeccCCCCCCc-----ceeecchHHHHHHHcCCccc-------cCCCeE
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKN-PNVQVAIIEQSVSPGGAS-----GSVVRKPAHLFLDELGIDYD-------EQDNYV 172 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~-~G~kV~viEk~~~~GG~~-----~~~~~~~~~~~l~~~Gi~~~-------~~~~~~ 172 (352)
...|+|||+|..|+-+|..|++. ++.+|++|++.+..-... ...+.....+++..+.-... ....|.
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~ 306 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYS 306 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSS
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCC
Confidence 45799999999999999999974 478999999986431100 00000101111111100000 000000
Q ss_pred EEec--hHHHHH-HHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCC
Q 039605 173 VIKH--AALFTS-TIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHD 249 (352)
Q Consensus 173 ~~~~--~~~~~~-~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~ 249 (352)
.... ...... ...+++....+++++.++.|+++..+++.+ .+.+.+ .. +|+..++.+|.||+|||..
T Consensus 307 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~~-~v~~~~------~~---~g~~~~~~~D~Vv~AtG~~ 376 (463)
T 3s5w_A 307 VVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQGI-ELALRD------AG---SGELSVETYDAVILATGYE 376 (463)
T ss_dssp CBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTEE-EEEEEE------TT---TCCEEEEEESEEEECCCEE
T ss_pred cCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCEE-EEEEEE------cC---CCCeEEEECCEEEEeeCCC
Confidence 0000 111222 223334445799999999999998877654 344432 11 1245679999999999976
Q ss_pred CCCCCCCCCCccccccccccceeecccc-----cccCceeEecchhhh
Q 039605 250 GPFGATGVRGMKALDMNTAEDAIVKLTR-----EIVPGMIVAGMEVAE 292 (352)
Q Consensus 250 ~~~~~~g~~g~~~~~~~~g~~~vv~~~~-----~~~pg~~~aG~~~~~ 292 (352)
+....+-+.+.... . +...+.+..+ ...|++|+.|++...
T Consensus 377 p~~~~~~l~~l~~~-~--g~i~v~~~~~~~~~~~~~~~Ifa~G~~~~~ 421 (463)
T 3s5w_A 377 RQLHRQLLEPLAEY-L--GDHEIGRDYRLQTDERCKVAIYAQGFSQAS 421 (463)
T ss_dssp CCC-CTTTGGGGGG-B--C--CCCTTSBCCBCTTBCSEEEESSCCHHH
T ss_pred CCCccchhHHHHHH-h--CCcccCcccccccCCCCCCeEEEcCCCccc
Confidence 44111111111110 0 2222333322 236789999998754
No 227
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.60 E-value=9e-08 Score=96.65 Aligned_cols=35 Identities=31% Similarity=0.575 Sum_probs=32.4
Q ss_pred CCCccEEEECCcHHHHHHHHHHhcCCCCcEEEEecc
Q 039605 104 HADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQS 139 (352)
Q Consensus 104 ~~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~ 139 (352)
..+|||+|||||++|++||+.|++. |++|+|||+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~-g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKY-GAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHT-TCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhC-CCeEEEEecc
Confidence 3478999999999999999999999 9999999973
No 228
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=98.59 E-value=7.8e-08 Score=96.08 Aligned_cols=59 Identities=25% Similarity=0.331 Sum_probs=44.4
Q ss_pred HHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEE---EeCEEEEccCCCC
Q 039605 183 TIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVM---EAKVVVSSCGHDG 250 (352)
Q Consensus 183 ~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i---~A~~VIlAtG~~~ 250 (352)
.+++.+.++.|+++++++.|++|+.++++++||.+.+. .+ |+..++ .+|.||+|+|++.
T Consensus 200 ~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~gV~~~~~------~~---g~~~~~~v~~~~~VIlaaG~~~ 261 (546)
T 1kdg_A 200 TYLQTALARPNFTFKTNVMVSNVVRNGSQILGVQTNDP------TL---GPNGFIPVTPKGRVILSAGAFG 261 (546)
T ss_dssp THHHHHHTCTTEEEECSCCEEEEEEETTEEEEEEESCT------TS---SGGGEEEEEEEEEEEECSHHHH
T ss_pred HHHHHHhhCCCcEEEeCCEEEEEEEeCCEEEEEEEEec------CC---CceeEEEEEeCCEEEEcCChhc
Confidence 35666666689999999999999999889999988431 11 122233 7899999999864
No 229
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.59 E-value=1.8e-07 Score=88.68 Aligned_cols=92 Identities=18% Similarity=0.185 Sum_probs=61.3
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCC-----------cceeecch--------HHHHHHHcCCccc-
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGA-----------SGSVVRKP--------AHLFLDELGIDYD- 166 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~-----------~~~~~~~~--------~~~~l~~~Gi~~~- 166 (352)
+||+|||||++|+.+|+.|++. |++|+|||+++..+.. |+..+... ..+.++.+|-..-
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~-G~~V~liE~~~~~~tp~h~~d~i~eL~CnpSigG~~~~~akGlL~~EIdaLGg~m~~ 80 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRL-GVPVRLFEMRPKRMTPAHGTDRFAEIVCSNSLGGEGETNAKGLLQAEMRRAGSLVME 80 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEECCTTTSCCSSCCSSCTTCCCSCCEEEECSTTCHHHHHHHHHHHHTCHHHH
T ss_pred CCEEEECchHHHHHHHHHHHHC-CCcEEEEeccCCcCCccccCCCccccccCcCCCccccccchhHHHHHHHHcCChHhh
Confidence 4999999999999999999999 9999999987632211 11222111 1333444443211
Q ss_pred ---c---CCCeEEEechHHHHHHHHHHHHcCCCcEEEcc
Q 039605 167 ---E---QDNYVVIKHAALFTSTIMSKLLARPNVKLFNA 199 (352)
Q Consensus 167 ---~---~~~~~~~~~~~~~~~~L~~~~~~~~gv~i~~~ 199 (352)
+ ........+...|...+.+.+..+++++++..
T Consensus 81 ~aD~~~ipAg~al~vDR~~f~~~~~~~le~~pni~l~q~ 119 (443)
T 3g5s_A 81 AADLARVPAGGALAVDREEFSGYITERLTGHPLLEVVRE 119 (443)
T ss_dssp HHHHSEECCTTEEEECHHHHHHHHHHHHHTCTTEEEECS
T ss_pred hhhhcCCCCCccccCCcHHHHHHHHHHHHcCCCeEEEhh
Confidence 0 01122345677888888899998999998855
No 230
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.59 E-value=1.6e-07 Score=97.39 Aligned_cols=39 Identities=31% Similarity=0.631 Sum_probs=36.3
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCC
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGG 144 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG 144 (352)
..+||+|||||++|+++|+.|++. |++|+|+|+...+||
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~-g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNF-GIKVTVLEAKDRIGG 373 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSSSSCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC-CCcEEEEecccceec
Confidence 358999999999999999999999 999999999888877
No 231
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.58 E-value=4.7e-08 Score=94.79 Aligned_cols=35 Identities=26% Similarity=0.458 Sum_probs=31.9
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
+.+||+|||||++|+++|+.|+++ |++|+|||+..
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~-G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQH-DVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHT-TCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHC-CCeEEEEcCCC
Confidence 357999999999999999999999 99999999975
No 232
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.58 E-value=1.3e-07 Score=89.84 Aligned_cols=106 Identities=16% Similarity=0.193 Sum_probs=65.7
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHH
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIM 185 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~ 185 (352)
..||+|||||++|+.+|..|++. | +|+|||+.+..+.. ......++. |. +++.. + .....+ +
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~-g-~V~lie~~~~~~~~-----~~~l~~~~~--g~-~~~~~-~--~~~~~~----~- 69 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQT-Y-EVTVIDKEPVPYYS-----KPMLSHYIA--GF-IPRNR-L--FPYSLD----W- 69 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTT-S-EEEEECSSSSCCCC-----STTHHHHHT--TS-SCGGG-G--CSSCHH----H-
T ss_pred CCcEEEECCcHHHHHHHHHHhhc-C-CEEEEECCCCCccc-----cchhHHHHh--CC-CCHHH-h--ccCCHH----H-
Confidence 46999999999999999999999 8 99999998754311 111111111 11 11100 0 000111 1
Q ss_pred HHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 186 SKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 186 ~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
+ ++.|++++.++++..+..++..+. .+ ..++.+|.+|+|||..+
T Consensus 70 --~-~~~~v~~~~g~~v~~id~~~~~V~----~~--------------g~~~~~d~lViATGs~p 113 (367)
T 1xhc_A 70 --Y-RKRGIEIRLAEEAKLIDRGRKVVI----TE--------------KGEVPYDTLVLATGARA 113 (367)
T ss_dssp --H-HHHTEEEECSCCEEEEETTTTEEE----ES--------------SCEEECSEEEECCCEEE
T ss_pred --H-HhCCcEEEECCEEEEEECCCCEEE----EC--------------CcEEECCEEEECCCCCC
Confidence 1 235899999988888765443332 12 25799999999999754
No 233
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.57 E-value=2.5e-08 Score=100.58 Aligned_cols=116 Identities=14% Similarity=0.120 Sum_probs=71.7
Q ss_pred CccEEEECCcHHHHHHHHHHhcC-CCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHH
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKN-PNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTI 184 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~-~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L 184 (352)
..||+|||||++|++||+.|++. +|.+|+|||+.+..+- ......+. ++-.+.... ..+.. .
T Consensus 36 ~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~------~~~~lp~~--~~g~~~~~~--------~~~~~-~ 98 (588)
T 3ics_A 36 SRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISF------ANCGLPYY--IGGVITERQ--------KLLVQ-T 98 (588)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSB------CGGGHHHH--HTTSSCCGG--------GGBSS-C
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccc------cCCCCchh--hcCcCCChH--------Hhhcc-C
Confidence 46999999999999999999984 3789999999987642 11111111 111110000 00000 1
Q ss_pred HHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 185 MSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 185 ~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
.+.+.++.+++++++++|+++..++..+.-....+ ++..++.+|.+|+|||...
T Consensus 99 ~~~~~~~~gi~v~~~~~V~~id~~~~~v~v~~~~~------------g~~~~~~~d~lviAtG~~p 152 (588)
T 3ics_A 99 VERMSKRFNLDIRVLSEVVKINKEEKTITIKNVTT------------NETYNEAYDVLILSPGAKP 152 (588)
T ss_dssp HHHHHHHTTCEEECSEEEEEEETTTTEEEEEETTT------------CCEEEEECSEEEECCCEEE
T ss_pred HHHHHHhcCcEEEECCEEEEEECCCCEEEEeecCC------------CCEEEEeCCEEEECCCCCC
Confidence 22222356899999999999987766543111111 1235799999999999743
No 234
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.56 E-value=5.7e-08 Score=94.22 Aligned_cols=109 Identities=14% Similarity=0.247 Sum_probs=67.8
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCC--cEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHH
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNV--QVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTST 183 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~--kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~ 183 (352)
.+||+|||||++|+.+|..|++. |. +|+|||+.+....... .....++. +.. .. ..+. ..
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~-g~~~~V~lie~~~~~~~~~~----~l~~~~~~--~~~-~~-~~~~--~~------- 65 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRAS-GWEGNIRLVGDATVIPHHLP----PLSKAYLA--GKA-TA-ESLY--LR------- 65 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHT-TCCSEEEEECSCCSCCBCSG----GGGTTTTT--TCS-CS-GGGB--SS-------
T ss_pred CCcEEEEcCHHHHHHHHHHHHcc-CcCCCEEEEECCCCCCCcCC----CCcHHHhC--CCC-Ch-HHhc--cc-------
Confidence 57999999999999999999999 88 7999999764321100 00000000 000 00 0000 00
Q ss_pred HHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 184 IMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 184 L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
+.+.+ ++.|++++.++.|..+..++.. +.+.+ ..++.+|.+|+|||..+
T Consensus 66 ~~~~~-~~~gv~~~~~~~v~~i~~~~~~---v~~~~--------------g~~~~~d~lviAtG~~p 114 (431)
T 1q1r_A 66 TPDAY-AAQNIQLLGGTQVTAINRDRQQ---VILSD--------------GRALDYDRLVLATGGRP 114 (431)
T ss_dssp CHHHH-HHTTEEEECSCCEEEEETTTTE---EEETT--------------SCEEECSEEEECCCEEE
T ss_pred CHHHH-HhCCCEEEeCCEEEEEECCCCE---EEECC--------------CCEEECCEEEEcCCCCc
Confidence 01112 2468999999999888765443 33322 24799999999999754
No 235
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.56 E-value=2.9e-07 Score=90.41 Aligned_cols=115 Identities=14% Similarity=0.118 Sum_probs=70.5
Q ss_pred ccEEEECCcHHHHHHHHHHhcC-CCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKN-PNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIM 185 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~-~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~ 185 (352)
+||+|||||++|+++|+.|++. .|.+|+|||+.+..++... ....++. +...+. .++.....
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~-----~~~~~~~--~~~~~~----------~~l~~~~~ 99 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQC-----GLPYVIS--GAIAST----------EKLIARNV 99 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGG-----GHHHHHT--TSSSCG----------GGGBSSCH
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCC-----Ccchhhc--CCcCCH----------HHhhhcCH
Confidence 4999999999999999999983 3899999999876543210 0011111 110000 00000112
Q ss_pred HHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 186 SKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 186 ~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
+.+.++.|++++.++.+..+..+++.+. +... .+ |+..++.+|.+|+|||..+
T Consensus 100 ~~~~~~~gv~~~~~~~v~~i~~~~~~v~-v~~~--------~~---g~~~~~~~d~lviAtG~~p 152 (480)
T 3cgb_A 100 KTFRDKYGIDAKVRHEVTKVDTEKKIVY-AEHT--------KT---KDVFEFSYDRLLIATGVRP 152 (480)
T ss_dssp HHHHHTTCCEEESSEEEEEEETTTTEEE-EEET--------TT---CCEEEEECSEEEECCCEEE
T ss_pred HHHHhhcCCEEEeCCEEEEEECCCCEEE-EEEc--------CC---CceEEEEcCEEEECCCCcc
Confidence 2333356899999999988876655442 2210 01 1224799999999999754
No 236
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.55 E-value=1.4e-07 Score=93.03 Aligned_cols=113 Identities=14% Similarity=0.185 Sum_probs=70.2
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCC---CcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHH
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPN---VQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFT 181 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G---~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~ 181 (352)
+++||+|||||++|+++|..|++. | .+|+|||+.+..+... .....++. + .+.....+. ..
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~-g~~~~~V~lie~~~~~~~~~-----~~~~~~~~--~-~~~~~~~~~--~~----- 97 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTN-YGDANEIVVFDQNSNISFLG-----AGMALWIG--E-QIAGPEGLF--YS----- 97 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH-HGGGSEEEEECSSSCCSBCG-----GGHHHHHT--T-SSSCSGGGB--SC-----
T ss_pred cCCcEEEECCCHHHHHHHHHHHhc-CCCCCeEEEEECCCCCCccc-----cccchhhc--C-ccCCHHHhh--hc-----
Confidence 358999999999999999999998 7 9999999987554211 00111111 1 100000000 00
Q ss_pred HHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 182 STIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 182 ~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
+.+.+. +.|++++.++++..+..+++.+. +.. ++ +..++.+|.+|+|||..+
T Consensus 98 --~~~~~~-~~gv~v~~~~~v~~i~~~~~~v~-v~~-~g------------~~~~~~~d~lviAtG~~p 149 (490)
T 2bc0_A 98 --DKEELE-SLGAKVYMESPVQSIDYDAKTVT-ALV-DG------------KNHVETYDKLIFATGSQP 149 (490)
T ss_dssp --CHHHHH-HTTCEEETTCCEEEEETTTTEEE-EEE-TT------------EEEEEECSEEEECCCEEE
T ss_pred --CHHHHH-hCCCEEEeCCEEEEEECCCCEEE-EEe-CC------------cEEEEECCEEEECCCCCc
Confidence 011122 45899999999988876655442 211 11 135799999999999754
No 237
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.52 E-value=2e-07 Score=89.72 Aligned_cols=106 Identities=15% Similarity=0.179 Sum_probs=68.8
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCC--cEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHH
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNV--QVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTS 182 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~--kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~ 182 (352)
.++||+|||||++|+++|+.|++. |. +|+|||+.+..+.... .....++.... .+. ..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~-g~~~~V~lie~~~~~~~~~~----~~~~~~~~~~~--~~~---~~---------- 65 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQA-GYQGLITVVGDEAERPYDRP----PLSKDFMAHGD--AEK---IR---------- 65 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHH-TCCSCEEEEESSCSCCBCSG----GGGTHHHHHCC--GGG---SB----------
T ss_pred CCCcEEEECChHHHHHHHHHHHcc-CCCCeEEEEECCCCCcccCC----CCCHHHhCCCc--hhh---hh----------
Confidence 367999999999999999999998 87 5999999875431100 00112222111 110 00
Q ss_pred HHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 183 TIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 183 ~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
++ ..++.|++++.++++..+..++.. +.+.+ ..++.+|.+|+|||..+
T Consensus 66 --~~-~~~~~~v~~~~~~~v~~i~~~~~~---v~~~~--------------g~~~~~d~lviAtG~~~ 113 (408)
T 2gqw_A 66 --LD-CKRAPEVEWLLGVTAQSFDPQAHT---VALSD--------------GRTLPYGTLVLATGAAP 113 (408)
T ss_dssp --CC-CTTSCSCEEEETCCEEEEETTTTE---EEETT--------------SCEEECSEEEECCCEEE
T ss_pred --HH-HHHHCCCEEEcCCEEEEEECCCCE---EEECC--------------CCEEECCEEEECCCCCC
Confidence 00 123578999999888888665443 33322 24799999999999754
No 238
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.49 E-value=1.6e-07 Score=90.39 Aligned_cols=107 Identities=16% Similarity=0.232 Sum_probs=68.4
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCc--EEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQ--VAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTI 184 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~k--V~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L 184 (352)
.||+|||||++|+++|..|++. |.+ |+|||+.+..+..... ....++. ...... .+ ....++
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~-g~~~~V~li~~~~~~~y~~~~----l~~~~~~-g~~~~~---~~---~~~~~~---- 66 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAE-GFEGRISLIGDEPHLPYDRPS----LSKAVLD-GSLERP---PI---LAEADW---- 66 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCSEEEEEECSSSSSBCSGG----GGTHHHH-TSSSSC---CB---SSCTTH----
T ss_pred CCEEEEcccHHHHHHHHHHHcc-CcCCeEEEEECCCCCCcCCcc----ccHHHhC-CCCCHH---Hh---cCCHHH----
Confidence 3899999999999999999999 887 9999998765421100 0111111 111111 11 011111
Q ss_pred HHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 185 MSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 185 ~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
+ .+.+++++.++++..+..++.. +.+.+ ..++.+|.+|+|||...
T Consensus 67 ---~-~~~~i~~~~~~~v~~id~~~~~---v~~~~--------------g~~~~~d~lvlAtG~~p 111 (410)
T 3ef6_A 67 ---Y-GEARIDMLTGPEVTALDVQTRT---ISLDD--------------GTTLSADAIVIATGSRA 111 (410)
T ss_dssp ---H-HHTTCEEEESCCEEEEETTTTE---EEETT--------------SCEEECSEEEECCCEEE
T ss_pred ---H-HHCCCEEEeCCEEEEEECCCCE---EEECC--------------CCEEECCEEEEccCCcc
Confidence 1 1458999999999988765543 33322 25799999999999763
No 239
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.49 E-value=7.9e-08 Score=91.60 Aligned_cols=108 Identities=18% Similarity=0.237 Sum_probs=66.0
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCC--CcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHH
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPN--VQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTST 183 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G--~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~ 183 (352)
++||+|||||++|+++|+.|++. | .+|+|||+.. |.. +..+... ..+... ....++...
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~-g~~~~V~lie~~~--g~~----~~~~~l~----~~~~~~--------~~~~~~~~~ 64 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKL-DGETPLLMITADD--GRS----YSKPMLS----TGFSKN--------KDADGLAMA 64 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTT-CSSSCEEEECSSC--CCE----ECGGGGG----GTTTTT--------CCHHHHEEE
T ss_pred CCcEEEECChHHHHHHHHHHHhh-CCCCCEEEEECCC--CCc----cCccccc----HHHhCC--------CCHHHhhcc
Confidence 57999999999999999999998 8 5689999875 211 1111000 000000 011111111
Q ss_pred HHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 184 IMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 184 L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
..+.+.++.+++++.++.+..+..++..+ .+. ..++.+|.+|+|||..+
T Consensus 65 ~~~~~~~~~~v~~~~~~~v~~i~~~~~~v---~~~---------------~~~~~~d~lviAtG~~p 113 (384)
T 2v3a_A 65 EPGAMAEQLNARILTHTRVTGIDPGHQRI---WIG---------------EEEVRYRDLVLAWGAEP 113 (384)
T ss_dssp CHHHHHHHTTCEEECSCCCCEEEGGGTEE---EET---------------TEEEECSEEEECCCEEE
T ss_pred CHHHHHHhCCcEEEeCCEEEEEECCCCEE---EEC---------------CcEEECCEEEEeCCCCc
Confidence 12222234689999988888876544432 232 14699999999999754
No 240
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.49 E-value=3.3e-07 Score=91.55 Aligned_cols=56 Identities=20% Similarity=0.267 Sum_probs=43.0
Q ss_pred HHHHHcCCCcEEEccceeEEEEEeC-CEEEEEEEcccceeccCCCCCCCCCeEEEeC-EEEEccCCC
Q 039605 185 MSKLLARPNVKLFNAVAAEDLIVKG-NRVGGIVTNWALVSMNHDSQSCMDPNVMEAK-VVVSSCGHD 249 (352)
Q Consensus 185 ~~~~~~~~gv~i~~~t~v~~l~~~~-g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~-~VIlAtG~~ 249 (352)
+..+.++.|++++.++.|++|+.++ ++++||.+.+. . .|+..+++|+ .||+|+|++
T Consensus 215 l~~a~~~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~------~---~g~~~~i~A~k~VIlaaG~~ 272 (546)
T 2jbv_A 215 IHPIVEQENFTLLTGLRARQLVFDADRRCTGVDIVDS------A---FGHTHRLTARNEVVLSTGAI 272 (546)
T ss_dssp TGGGTTCTTEEEECSCEEEEEEECTTSBEEEEEEESS------T---TSCEEEEEEEEEEEECSHHH
T ss_pred HHHHhcCCCcEEEeCCEEEEEEECCCCeEEEEEEEEC------C---CCcEEEEEeCccEEEecCcc
Confidence 3444446799999999999999987 88999987431 1 1235689998 999999984
No 241
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.48 E-value=4.3e-07 Score=88.30 Aligned_cols=113 Identities=19% Similarity=0.190 Sum_probs=68.0
Q ss_pred cEEEECCcHHHHHHHHHHhcC-CCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 108 DVVVVGAGSAGLSCAYEISKN-PNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~-~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
||+|||||++|+.+|..|++. +|.+|+|||+.+..+... .....++. +...+.. .+ ...+.+
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~-----~~~~~~~~--~~~~~~~-~~---------~~~~~~ 64 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLS-----AGMQLYLE--GKVKDVN-SV---------RYMTGE 64 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCG-----GGHHHHHT--TSSCCGG-GS---------BSCCHH
T ss_pred eEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCccc-----ccchhhhc--CccCCHH-Hh---------hcCCHH
Confidence 899999999999999999984 389999999987654210 00011111 1100000 00 000111
Q ss_pred HHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
.+. +.|++++.++.+..+..+++.+. +... .+ |+..++.+|.+|+|||..+
T Consensus 65 ~~~-~~gv~~~~~~~v~~i~~~~~~v~-~~~~--------~~---g~~~~~~~d~lviAtG~~p 115 (447)
T 1nhp_A 65 KME-SRGVNVFSNTEITAIQPKEHQVT-VKDL--------VS---GEERVENYDKLIISPGAVP 115 (447)
T ss_dssp HHH-HTTCEEEETEEEEEEETTTTEEE-EEET--------TT---CCEEEEECSEEEECCCEEE
T ss_pred HHH-HCCCEEEECCEEEEEeCCCCEEE-EEec--------CC---CceEEEeCCEEEEcCCCCc
Confidence 222 35899999999888876655442 2110 01 1224699999999999754
No 242
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.46 E-value=3.7e-07 Score=91.33 Aligned_cols=114 Identities=12% Similarity=0.079 Sum_probs=69.7
Q ss_pred cEEEECCcHHHHHHHHHHhcC-CCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 108 DVVVVGAGSAGLSCAYEISKN-PNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~-~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
||+|||||++|+++|+.|++. +|.+|+|||+.+..+.. .....++ ++-.+...... .... .+
T Consensus 3 ~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~------~~~l~~~--~~~~~~~~~~~-~~~~--------~~ 65 (565)
T 3ntd_A 3 KILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFA------NCGLPYH--ISGEIAQRSAL-VLQT--------PE 65 (565)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBC------GGGHHHH--HTSSSCCGGGG-BCCC--------HH
T ss_pred cEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcccc------ccCchHH--hcCCcCChHHh-hccC--------HH
Confidence 899999999999999999985 27899999999876421 1111111 11110000000 0000 11
Q ss_pred HHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
.+.++.+++++.+++|+++..++..+. +... .+ ++..++.+|.+|+|||...
T Consensus 66 ~~~~~~~i~~~~~~~V~~id~~~~~v~-~~~~--------~~---g~~~~~~~d~lviAtG~~p 117 (565)
T 3ntd_A 66 SFKARFNVEVRVKHEVVAIDRAAKLVT-VRRL--------LD---GSEYQESYDTLLLSPGAAP 117 (565)
T ss_dssp HHHHHHCCEEETTEEEEEEETTTTEEE-EEET--------TT---CCEEEEECSEEEECCCEEE
T ss_pred HHHHhcCcEEEECCEEEEEECCCCEEE-EEec--------CC---CCeEEEECCEEEECCCCCC
Confidence 122235899999999999987666543 2210 01 1345899999999999743
No 243
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.45 E-value=9.3e-08 Score=98.85 Aligned_cols=164 Identities=14% Similarity=0.136 Sum_probs=101.2
Q ss_pred ccEEEEC--CcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHH
Q 039605 107 TDVVVVG--AGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTI 184 (352)
Q Consensus 107 ~DVvIIG--gG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L 184 (352)
-.|+||| +|..|+-+|..|++. |.+|+||++.+ +.. . ..+.. . ...+
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~-G~~Vtlv~~~~-l~~------------~-~~~~~------------~----~~~~ 577 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATA-GHEVTIVSGVH-LAN------------Y-MHFTL------------E----YPNM 577 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHT-TCEEEEEESSC-TTH------------H-HHHTT------------C----HHHH
T ss_pred CeEEEEcCCCCchHHHHHHHHHHc-CCEEEEEeccc-ccc------------c-ccccc------------c----HHHH
Confidence 4799998 999999999999999 99999999876 321 0 00000 0 1223
Q ss_pred HHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEc--cccee-c---cCC-CCCCCCCeEEEeCEEEEccCCCCCCCCCCC
Q 039605 185 MSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTN--WALVS-M---NHD-SQSCMDPNVMEAKVVVSSCGHDGPFGATGV 257 (352)
Q Consensus 185 ~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~--~g~~~-~---~~~-~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~ 257 (352)
.+.+. +.||++++++.+.++.. +.+. +... ++... . +.. ....++..++.+|.||+|+|..+....
T Consensus 578 ~~~l~-~~GV~i~~~~~v~~i~~--~~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~~l--- 650 (729)
T 1o94_A 578 MRRLH-ELHVEELGDHFCSRIEP--GRME-IYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSECTL--- 650 (729)
T ss_dssp HHHHH-HTTCEEECSEEEEEEET--TEEE-EEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECCHH---
T ss_pred HHHHH-hCCCEEEcCcEEEEEEC--CeEE-EEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCChHH---
Confidence 34443 56999999999999863 3322 2211 10000 0 000 001123346999999999996433211
Q ss_pred CCccccccccccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHHcCC
Q 039605 258 RGMKALDMNTAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQ 323 (352)
Q Consensus 258 ~g~~~~~~~~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~l~~ 323 (352)
. ..+. ..+.+++++..|++|++||+.. ++ .+..++.+|+.||..|..+|..
T Consensus 651 ~--~~l~-----~~vd~~~~t~~~~VyAiGD~~~-----~~---~~~~A~~~G~~aA~~i~~~l~~ 701 (729)
T 1o94_A 651 W--NELK-----ARESEWAENDIKGIYLIGDAEA-----PR---LIADATFTGHRVAREIEEANPQ 701 (729)
T ss_dssp H--HHHH-----HTGGGTGGGTCCEEEECGGGTS-----CC---CHHHHHHHHHHHHHTTTSSCTT
T ss_pred H--HHHh-----hhcccccccCCCCeEEEeCccc-----hh---hHHHHHHHHHHHHHHhhhhccc
Confidence 0 0110 0123556678899999999874 12 2445688999999999887754
No 244
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.43 E-value=4.9e-07 Score=88.04 Aligned_cols=114 Identities=13% Similarity=0.100 Sum_probs=68.8
Q ss_pred ccEEEECCcHHHHHHHHHHhcC-CCCcEEEEeccCCCCCCcceeecchHHHHHHHcCC-c-cccCCCeEEEechHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKN-PNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGI-D-YDEQDNYVVIKHAALFTST 183 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~-~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi-~-~~~~~~~~~~~~~~~~~~~ 183 (352)
+||+|||||++|+++|+.|++. +|.+|+|||+.+..+... .....++ .+. . ++.. .+ ...
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~-----~~~~~~~--~g~~~~~~~~-~~---------~~~ 63 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLS-----CGIALYL--GKEIKNNDPR-GL---------FYS 63 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCG-----GGHHHHH--TTCBGGGCGG-GG---------BSC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCccc-----ccchhhh--cCCcccCCHH-Hh---------hhc
Confidence 4899999999999999999984 389999999987554210 0001111 111 0 0110 00 000
Q ss_pred HHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 184 IMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 184 L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
+.+.+ ++.|++++.++++..+..+++.+. +.... + ++..++.+|.+|+|||..+
T Consensus 64 ~~~~~-~~~gv~~~~~~~v~~i~~~~~~v~-v~~~~--------~---g~~~~~~~d~lviAtGs~p 117 (452)
T 2cdu_A 64 SPEEL-SNLGANVQMRHQVTNVDPETKTIK-VKDLI--------T---NEEKTEAYDKLIMTTGSKP 117 (452)
T ss_dssp CHHHH-HHTTCEEEESEEEEEEEGGGTEEE-EEETT--------T---CCEEEEECSEEEECCCEEE
T ss_pred CHHHH-HHcCCEEEeCCEEEEEEcCCCEEE-EEecC--------C---CceEEEECCEEEEccCCCc
Confidence 11112 245899999988888876555442 22100 0 1236799999999999754
No 245
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.43 E-value=2.6e-07 Score=88.63 Aligned_cols=106 Identities=16% Similarity=0.258 Sum_probs=65.9
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCC--cEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNV--QVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTI 184 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~--kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L 184 (352)
.||+|||||++|+++|..|++. |. +|+|||+.+......... ...++.. .... ..+. ....
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~-g~~~~V~lie~~~~~~y~~~~l----~~~~l~~-~~~~---~~~~--~~~~------ 64 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQA-KYPGRIALINDEKHLPYQRPPL----SKAYLKS-GGDP---NSLM--FRPE------ 64 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCSCEEEECCSSSSSBCSGGG----GTGGGGS-CCCT---TSSB--SSCH------
T ss_pred CCEEEEcChHHHHHHHHHHHhh-CcCCCEEEEeCCCCCCCCCccC----CHHHHCC-CCCH---HHcc--CCCH------
Confidence 3899999999999999999999 88 899999987543211000 0001100 0000 0000 0111
Q ss_pred HHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCC
Q 039605 185 MSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHD 249 (352)
Q Consensus 185 ~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~ 249 (352)
+.+ .+.+++++. ++++.+..++.. +.+.+ ..++.+|.+|+|||..
T Consensus 65 -~~~-~~~~i~~~~-~~v~~id~~~~~---v~~~~--------------g~~~~~d~lvlAtG~~ 109 (404)
T 3fg2_P 65 -KFF-QDQAIELIS-DRMVSIDREGRK---LLLAS--------------GTAIEYGHLVLATGAR 109 (404)
T ss_dssp -HHH-HHTTEEEEC-CCEEEEETTTTE---EEESS--------------SCEEECSEEEECCCEE
T ss_pred -HHH-HhCCCEEEE-EEEEEEECCCCE---EEECC--------------CCEEECCEEEEeeCCC
Confidence 111 246899998 888888765543 33322 2589999999999974
No 246
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.43 E-value=4.5e-07 Score=88.04 Aligned_cols=113 Identities=16% Similarity=0.150 Sum_probs=67.9
Q ss_pred cEEEECCcHHHHHHHHHHhcCCC--CcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHH
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPN--VQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIM 185 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G--~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~ 185 (352)
.|||||||++|++||..|++. | .+|+|||+.+..... .....++- .+...+....+ ...... +
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~-g~~~~V~lie~~~~~~~~------~~~l~~~~-~~~~~~~~~~~--~~~~~~----~- 66 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRL-DKESDIIIFEKDRDMSFA------NCALPYVI-GEVVEDRRYAL--AYTPEK----F- 66 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHH-CSSSCEEEEESSSCSSBC------GGGHHHHH-TTSSCCGGGTB--CCCHHH----H-
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCCCcEEEEeCCCCCCCC------cchhHHHH-cCCccchhhhh--hcCHHH----H-
Confidence 599999999999999999987 6 579999998754321 11111110 01111110001 011111 1
Q ss_pred HHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 186 SKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 186 ~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
.++.+++++.+++|+.+..+...+. +... ..++..++.+|.+|+|||..+
T Consensus 67 ---~~~~~i~~~~~~~V~~id~~~~~~~-~~~~-----------~~~~~~~~~yd~lVIATGs~p 116 (437)
T 4eqs_A 67 ---YDRKQITVKTYHEVIAINDERQTVS-VLNR-----------KTNEQFEESYDKLILSPGASA 116 (437)
T ss_dssp ---HHHHCCEEEETEEEEEEETTTTEEE-EEET-----------TTTEEEEEECSEEEECCCEEE
T ss_pred ---HHhcCCEEEeCCeEEEEEccCcEEE-EEec-----------cCCceEEEEcCEEEECCCCcc
Confidence 1245899999999998876655443 2221 111346799999999999754
No 247
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=98.42 E-value=6.8e-07 Score=90.09 Aligned_cols=53 Identities=13% Similarity=0.066 Sum_probs=41.4
Q ss_pred HHcCCCcEEEccceeEEEEEeC----CEEEEEEEcccceeccCCCCCCCCCeEEEe-CEEEEccCCCC
Q 039605 188 LLARPNVKLFNAVAAEDLIVKG----NRVGGIVTNWALVSMNHDSQSCMDPNVMEA-KVVVSSCGHDG 250 (352)
Q Consensus 188 ~~~~~gv~i~~~t~v~~l~~~~----g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A-~~VIlAtG~~~ 250 (352)
+.++.|++++.++.|++|+.++ ++++||...+. +|+..+++| +.||+|+|+..
T Consensus 240 ~~~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~----------~g~~~~v~A~k~VILaaG~~~ 297 (587)
T 1gpe_A 240 NYQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTN----------KAVNFDVFAKHEVLLAAGSAI 297 (587)
T ss_dssp TTTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEE----------TTEEEEEEEEEEEEECSCTTT
T ss_pred hhcCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEeC----------CCcEEEEEecccEEEccCCCC
Confidence 3456799999999999999874 48999987420 123568999 89999999865
No 248
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=98.41 E-value=1.6e-07 Score=91.87 Aligned_cols=99 Identities=21% Similarity=0.313 Sum_probs=65.5
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCC--CcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHH
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPN--VQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTST 183 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G--~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~ 183 (352)
.+||+|||+|++|+.+|..|++. | ++|+|||+.+.++|.+ .+|+.... ....++...
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~-g~~~~V~vie~~~~~gg~~-------------~~g~~p~~-------~~~~~~~~~ 64 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKH-HSRAHVDIYEKQLVPFGLV-------------RFGVAPDH-------PEVKNVINT 64 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-CSSCEEEEECSSSSSCTHH-------------HHTSCTTC-------GGGGGHHHH
T ss_pred CceEEEECcCHHHHHHHHHHHhc-CCCCCEEEEeCCCcCCcee-------------ecccCCCC-------ccHHHHHHH
Confidence 56999999999999999999998 7 9999999998776521 22331110 011233333
Q ss_pred HHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 184 IMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 184 L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
+.+.+ ++.|++++.++.+. .. +.+. ...+.+|.||+|||...
T Consensus 65 ~~~~~-~~~gv~~~~~~~v~------~~---V~~~---------------~~~~~~d~lVlAtGs~~ 106 (460)
T 1cjc_A 65 FTQTA-RSDRCAFYGNVEVG------RD---VTVQ---------------ELQDAYHAVVLSYGAED 106 (460)
T ss_dssp HHHHH-TSTTEEEEBSCCBT------TT---BCHH---------------HHHHHSSEEEECCCCCE
T ss_pred HHHHH-HhCCcEEEeeeEEe------eE---EEec---------------cceEEcCEEEEecCcCC
Confidence 33333 46799999886551 11 1111 12467999999999873
No 249
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.39 E-value=2.2e-07 Score=90.70 Aligned_cols=40 Identities=28% Similarity=0.353 Sum_probs=37.9
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCC
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGA 145 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~ 145 (352)
.++||||||+|++||+||+.|+++ |++|+|+|+++.+||.
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~-G~~V~vlE~~~~~GG~ 49 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVD-GKKVLHIDKQDHYGGE 49 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCGG
T ss_pred ccCCEEEECcCHHHHHHHHHHHHC-CCeEEEEeCCCCCCcc
Confidence 468999999999999999999999 9999999999999886
No 250
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.39 E-value=2e-07 Score=95.42 Aligned_cols=39 Identities=33% Similarity=0.551 Sum_probs=36.5
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGA 145 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~ 145 (352)
.+||+|||||++|+.+|+.|++. |++|+|||+.+..||.
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~-g~~V~lie~~~~~gg~ 411 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAAR-GHQVTLFDAHSEIGGQ 411 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSSSSCTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCCCCCCe
Confidence 57999999999999999999999 9999999999888874
No 251
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.39 E-value=2e-07 Score=99.76 Aligned_cols=99 Identities=19% Similarity=0.208 Sum_probs=66.3
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCC-cEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHH
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNV-QVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTI 184 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~-kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L 184 (352)
.+||+|||||++|++||+.|++. |+ +|+|+|+.+.+||. ..++++.... ..+.....
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~-G~~~Vtv~E~~~~~GG~-------------~~~~ip~~~~--------~~~~~~~~ 244 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARL-GYSDITIFEKQEYVGGL-------------STSEIPQFRL--------PYDVVNFE 244 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHT-TCCCEEEEESSSSCSTH-------------HHHTSCTTTS--------CHHHHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHhc-CCCcEEEEeCCCCCCcc-------------ccccCCcccC--------CHHHHHHH
Confidence 57999999999999999999999 99 79999999888873 1233321110 12233333
Q ss_pred HHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCC
Q 039605 185 MSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHD 249 (352)
Q Consensus 185 ~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~ 249 (352)
.+.+. +.|++++.++.+.. .. +.+.+ ..++.+|.||+|||..
T Consensus 245 ~~~~~-~~gv~~~~~~~v~~-----~~---v~~~~--------------~~~~~~d~vvlAtGa~ 286 (1025)
T 1gte_A 245 IELMK-DLGVKIICGKSLSE-----NE---ITLNT--------------LKEEGYKAAFIGIGLP 286 (1025)
T ss_dssp HHHHH-TTTCEEEESCCBST-----TS---BCHHH--------------HHHTTCCEEEECCCCC
T ss_pred HHHHH-HCCcEEEcccEecc-----ce---EEhhh--------------cCccCCCEEEEecCCC
Confidence 34444 67999998875521 11 11111 1346789999999985
No 252
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.34 E-value=4.1e-07 Score=87.48 Aligned_cols=40 Identities=28% Similarity=0.562 Sum_probs=37.2
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCC-CcEEEEeccCCCCCC
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPN-VQVAIIEQSVSPGGA 145 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G-~kV~viEk~~~~GG~ 145 (352)
.++||+|||||++||+||+.|+++ | .+|+|+|+.+.+||.
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~-g~~~v~v~E~~~~~GG~ 45 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQA-GFHDYTILERTDHVGGK 45 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT-TCCCEEEECSSSCSSTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHhC-CCCcEEEEECCCCCCCc
Confidence 367999999999999999999999 9 999999999988875
No 253
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.32 E-value=3.8e-07 Score=89.09 Aligned_cols=99 Identities=17% Similarity=0.292 Sum_probs=64.1
Q ss_pred CccEEEECCcHHHHHHHHHHhc-C-C----CCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHH
Q 039605 106 DTDVVVVGAGSAGLSCAYEISK-N-P----NVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAAL 179 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~-~-~----G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~ 179 (352)
.+||+|||||++|+.+|..|++ . + |++|+|||+.+.+||.+ .+|+..+.. ...+
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~-------------~~gv~p~~~-------~~~~ 62 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLV-------------RSGVAPDHP-------KIKS 62 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHH-------------HHTSCTTCT-------GGGG
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCcc-------------ccccCCCCC-------CHHH
Confidence 5799999999999999999988 4 1 78999999998777621 234422110 1122
Q ss_pred HHHHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCC
Q 039605 180 FTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHD 249 (352)
Q Consensus 180 ~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~ 249 (352)
+...+.+.+ ++.+++++.++.+ +.. +.+.+ .++.+|.||+|||..
T Consensus 63 ~~~~~~~~~-~~~~v~~~~~v~v------~~~---v~~~~---------------~~~~~d~lViAtG~~ 107 (456)
T 1lqt_A 63 ISKQFEKTA-EDPRFRFFGNVVV------GEH---VQPGE---------------LSERYDAVIYAVGAQ 107 (456)
T ss_dssp GHHHHHHHH-TSTTEEEEESCCB------TTT---BCHHH---------------HHHHSSEEEECCCCC
T ss_pred HHHHHHHHH-hcCCCEEEeeEEE------CCE---EEECC---------------CeEeCCEEEEeeCCC
Confidence 333333333 4678999887542 111 11111 247889999999985
No 254
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.30 E-value=1e-06 Score=86.47 Aligned_cols=39 Identities=41% Similarity=0.777 Sum_probs=37.1
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGA 145 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~ 145 (352)
.+||+|||||++||+||+.|++. |++|+|+|+.+.+||.
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~~~-g~~v~v~E~~~~~GG~ 49 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQKA-GYKVTVLEARTRPGGR 49 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSCTT
T ss_pred CCCEEEECCCHHHHHHHHHHHHC-CCCEEEEeccCCCCCc
Confidence 57999999999999999999999 9999999999998885
No 255
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.30 E-value=3e-07 Score=95.06 Aligned_cols=40 Identities=25% Similarity=0.441 Sum_probs=37.1
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCC
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGA 145 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~ 145 (352)
..+||+|||||++|+++|+.|++. |++|+|||+.+.+||.
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~-G~~Vtlie~~~~~GG~ 427 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMES-GYTVHLTDTAEKIGGH 427 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSTTTT
T ss_pred CCceEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCCCcCCe
Confidence 357999999999999999999999 9999999999888875
No 256
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.28 E-value=7e-06 Score=80.22 Aligned_cols=140 Identities=14% Similarity=0.047 Sum_probs=86.9
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
-.|+|||+|.+|+-.|..|++. |.+|+++++.+.+-+ .. +
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~-g~~V~li~~~~~~~~------------------~~------~--------------- 237 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKY-GAKKLISCYRTAPMG------------------YK------W--------------- 237 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHT-TCSEEEEECSSCCCC------------------CC------C---------------
T ss_pred CEEEEEcCCCCHHHHHHHHHHh-CCeEEEEEECCCCCC------------------CC------C---------------
Confidence 4799999999999999999999 999999998764311 00 0
Q ss_pred HHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCccccccc
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDMN 266 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~~ 266 (352)
..|++++ ..+.++. ++ ++.+.+| .++.+|.||+|||......+. ....++..+
T Consensus 238 ----~~~V~~~--~~V~~i~--~~---~V~~~dG--------------~~i~~D~Vi~atG~~p~~~~l--~~~~gl~~~ 290 (464)
T 2xve_A 238 ----PENWDER--PNLVRVD--TE---NAYFADG--------------SSEKVDAIILCTGYIHHFPFL--NDDLRLVTN 290 (464)
T ss_dssp ----CTTEEEC--SCEEEEC--SS---EEEETTS--------------CEEECSEEEECCCBCCCCTTB--CTTTCCCCC
T ss_pred ----CCceEEc--CCeEEEe--CC---EEEECCC--------------CEEeCCEEEECCCCCCCCCCc--CcccccccC
Confidence 1366665 4555553 23 3445332 478999999999976544322 111123322
Q ss_pred cc-cce-ee-cccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHHc
Q 039605 267 TA-EDA-IV-KLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 321 (352)
Q Consensus 267 ~g-~~~-vv-~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~l 321 (352)
.. ... .. +...+..|++|++||+.. +..+..+..+++.+|..+...+
T Consensus 291 ~~~~v~~~~~~~~~t~~p~i~aiGd~~~--------~~~~~~a~~qa~~~a~~l~G~~ 340 (464)
T 2xve_A 291 NRLWPLNLYKGVVWEDNPKFFYIGMQDQ--------WYSFNMFDAQAWYARDVIMGRL 340 (464)
T ss_dssp SSSCCSSEETTTEESSSTTEEECSCSCC--------SSCHHHHHHHHHHHHHHHTTSS
T ss_pred CCcccccccceEecCCCCCEEEEeCccc--------ccchHHHHHHHHHHHHHHcCCC
Confidence 22 210 11 123467899999999753 1234444556666666665443
No 257
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.27 E-value=3.7e-07 Score=90.41 Aligned_cols=39 Identities=31% Similarity=0.555 Sum_probs=37.0
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCC-CcEEEEeccCCCCCC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPN-VQVAIIEQSVSPGGA 145 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G-~kV~viEk~~~~GG~ 145 (352)
.+||+|||||++||+||+.|++. | ++|+|+|+.+.+||.
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~-G~~~V~VlEa~~riGGr 47 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQN-GIQDCLVLEARDRVGGR 47 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHT-TCCSEEEECSSSSSBTT
T ss_pred CCcEEEECCCHHHHHHHHHHHhc-CCCCEEEEeCCCCCCCc
Confidence 57999999999999999999999 9 999999999999886
No 258
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.25 E-value=6.1e-07 Score=86.05 Aligned_cols=40 Identities=30% Similarity=0.478 Sum_probs=36.5
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGA 145 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~ 145 (352)
++||+|||||++|+++|+.|++.+|++|+|+|+++.+||.
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~ 46 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGN 46 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGG
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCe
Confidence 6899999999999999999998548999999999888776
No 259
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.23 E-value=5.4e-07 Score=87.40 Aligned_cols=39 Identities=41% Similarity=0.658 Sum_probs=36.9
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGA 145 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~ 145 (352)
++||+|||||++||+||+.|++. |++|+|+|+.+.+||.
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~-g~~v~v~E~~~~~GG~ 43 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKA-GLSVAVIEARDRVGGR 43 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCTT
T ss_pred cCCEEEECCCHHHHHHHHHHHHC-CCcEEEEECCCCCCCc
Confidence 57999999999999999999999 9999999999888876
No 260
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.21 E-value=1.2e-06 Score=82.49 Aligned_cols=38 Identities=29% Similarity=0.518 Sum_probs=34.2
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCC
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPG 143 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~G 143 (352)
.++||+|||||++|+++|++|+++ |++|+|||+....+
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~-G~~V~vle~~~~~~ 42 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARK-GYSVHILARDLPED 42 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSCTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-CCEEEEEeccCCCC
Confidence 368999999999999999999999 99999999976433
No 261
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.20 E-value=1.1e-06 Score=86.69 Aligned_cols=124 Identities=13% Similarity=0.172 Sum_probs=68.0
Q ss_pred CccEEEECCcHHHHHHHHHHhcC-CCCcEEEEeccCCCCCCcce----eecchHHHHHHHc---CCccccCCCeEEEech
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKN-PNVQVAIIEQSVSPGGASGS----VVRKPAHLFLDEL---GIDYDEQDNYVVIKHA 177 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~-~G~kV~viEk~~~~GG~~~~----~~~~~~~~~l~~~---Gi~~~~~~~~~~~~~~ 177 (352)
++||||||||++|++||..|++. .|.+|+|||+.+..+..... .+........+.. +++.... .+. ....
T Consensus 11 ~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~ 88 (493)
T 1m6i_A 11 HVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKER-SIY-FQPP 88 (493)
T ss_dssp EEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCEE-ESB-SSCG
T ss_pred cCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhcccccccccccc-ccc-ccch
Confidence 67999999999999999888652 38899999998765421100 0000000001111 1110000 000 0000
Q ss_pred HHHH--HHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 178 ALFT--STIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 178 ~~~~--~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
..+. ..+. ++ .+.|++++.++.+..+..++.. |.+.+ ..++.+|.+|+|||..+
T Consensus 89 ~~~~~~~~l~-~~-~~~gv~~~~g~~v~~id~~~~~---V~~~~--------------g~~i~yd~lviATGs~p 144 (493)
T 1m6i_A 89 SFYVSAQDLP-HI-ENGGVAVLTGKKVVQLDVRDNM---VKLND--------------GSQITYEKCLIATGGTP 144 (493)
T ss_dssp GGSBCTTTTT-TS-TTCEEEEEETCCEEEEEGGGTE---EEETT--------------SCEEEEEEEEECCCEEE
T ss_pred Hhhcchhhhh-hh-hcCCeEEEcCCEEEEEECCCCE---EEECC--------------CCEEECCEEEECCCCCC
Confidence 0000 0010 11 2468999999999888765543 33332 25799999999999754
No 262
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.18 E-value=2.2e-06 Score=84.29 Aligned_cols=39 Identities=33% Similarity=0.644 Sum_probs=37.1
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGA 145 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~ 145 (352)
.+||+|||||++||++|+.|+++ |++|+|+|+.+.+||.
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~-g~~v~v~E~~~~~GG~ 51 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIH-GLNVTVFEAEGKAGGK 51 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-SCEEEEECSSSSSCSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCcEEEEEeCCCCCCc
Confidence 57999999999999999999999 9999999999999886
No 263
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.18 E-value=1.2e-06 Score=83.95 Aligned_cols=40 Identities=30% Similarity=0.448 Sum_probs=37.3
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCC
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGA 145 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~ 145 (352)
.++||+|||||++|+++|+.|++. |++|+|||+.+.+||.
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~-g~~v~v~E~~~~~GG~ 67 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASS-GQRVLIVDRRPHIGGN 67 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSSGG
T ss_pred CCCCEEEECccHHHHHHHHHHHHC-CCceEEEeccCCCCCc
Confidence 468999999999999999999999 9999999999888766
No 264
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.14 E-value=1.3e-06 Score=82.74 Aligned_cols=38 Identities=39% Similarity=0.619 Sum_probs=36.0
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGA 145 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~ 145 (352)
+||+|||||++|+++|+.|++. |++|+|+|+++.+||.
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~-g~~v~v~E~~~~~GG~ 39 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKL-NKKVLVIEKRNHIGGN 39 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGG-TCCEEEECSSSSSSGG
T ss_pred CCEEEECcCHHHHHHHHHHHhC-CCcEEEEecCCCCCcc
Confidence 6999999999999999999999 9999999999888876
No 265
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.13 E-value=1.8e-06 Score=82.02 Aligned_cols=42 Identities=29% Similarity=0.466 Sum_probs=38.3
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEecc-CCCCCCcc
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQS-VSPGGASG 147 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~-~~~GG~~~ 147 (352)
..+||+|||||++||++|+.|+++ |++|+|+|+. +.+||.+.
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~-G~~V~VlE~~~~~vGGr~~ 85 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRA-GHDVTILEANANRVGGRIK 85 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHT-SCEEEEECSCSSCCBTTCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHC-CCcEEEEeccccccCCcee
Confidence 467999999999999999999999 9999999999 88888643
No 266
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.12 E-value=2e-06 Score=84.63 Aligned_cols=41 Identities=27% Similarity=0.496 Sum_probs=37.2
Q ss_pred CCCccEEEECCcHHHHHHHHHHhcCCC-CcEEEEeccCCCCCC
Q 039605 104 HADTDVVVVGAGSAGLSCAYEISKNPN-VQVAIIEQSVSPGGA 145 (352)
Q Consensus 104 ~~~~DVvIIGgG~aGl~aA~~la~~~G-~kV~viEk~~~~GG~ 145 (352)
+..+||+|||||++||++|+.|+++ | .+|+|+|+.+.+||.
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~-g~~~v~v~E~~~~~GG~ 48 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTEL-GYKNWHLYECNDTPGGL 48 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHT-TCCSEEEEESSSSSSGG
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHc-CCCCEEEEeCCCCCCCe
Confidence 3478999999999999999999999 8 899999999888765
No 267
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.05 E-value=3.2e-06 Score=80.65 Aligned_cols=39 Identities=31% Similarity=0.515 Sum_probs=36.1
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGA 145 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~ 145 (352)
++||+|||||++|+++|+.|++. |.+|+|+|+.+.+||.
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~-g~~v~v~E~~~~~GG~ 41 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEK-GHQVHIIDQRDHIGGN 41 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT-TCEEEEEESSSSSSGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCcEEEEEecCCcCCc
Confidence 46999999999999999999999 9999999999887764
No 268
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.04 E-value=2.3e-05 Score=76.01 Aligned_cols=145 Identities=10% Similarity=0.019 Sum_probs=86.7
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCc-EEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHH
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQ-VAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTI 184 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~k-V~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L 184 (352)
.-+|+|||+|.+|+-.|..|++. |.+ |+++++.+..
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~-~~~~V~l~~r~~~~------------------------------------------ 248 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPV-AKHPIYQSLLGGGD------------------------------------------ 248 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTT-SCSSEEEECTTCCS------------------------------------------
T ss_pred CCEEEEEccCcCHHHHHHHHHHH-hCCcEEEEeCCCCc------------------------------------------
Confidence 34799999999999999999999 999 9999987521
Q ss_pred HHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCC---CCCc-
Q 039605 185 MSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATG---VRGM- 260 (352)
Q Consensus 185 ~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g---~~g~- 260 (352)
....|+++ ...+.++..+++ +|.+.+| ...+.+|.||+|||......+.+ +...
T Consensus 249 ----l~~~~i~~--~~~v~~~~~~~~---~v~~~dG-------------~~~~~~D~vi~atG~~~~~~~l~~~~l~~~~ 306 (447)
T 2gv8_A 249 ----IQNESLQQ--VPEITKFDPTTR---EIYLKGG-------------KVLSNIDRVIYCTGYLYSVPFPSLAKLKSPE 306 (447)
T ss_dssp ----CBCSSEEE--ECCEEEEETTTT---EEEETTT-------------EEECCCSEEEECCCBCCCCCCHHHHSCCSTT
T ss_pred ----CCCCCeEE--ecCeEEEecCCC---EEEECCC-------------CEeccCCEEEECCCCCcCCCCCccccccccc
Confidence 12345553 345555543333 3444332 23478999999999765433300 1110
Q ss_pred cccccccccceeeccc---ccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHHcCCC
Q 039605 261 KALDMNTAEDAIVKLT---REIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQP 324 (352)
Q Consensus 261 ~~~~~~~g~~~vv~~~---~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~l~~~ 324 (352)
..+..+ +...+..+. .+..|++|+.|++... ..+..+..+++.+|..+...+..+
T Consensus 307 ~~i~~~-~~~~~~~~~~v~~~~~p~l~~~G~~~~~--------~~~~~a~~qa~~~a~~~~g~~~lp 364 (447)
T 2gv8_A 307 TKLIDD-GSHVHNVYQHIFYIPDPTLAFVGLALHV--------VPFPTSQAQAAFLARVWSGRLKLP 364 (447)
T ss_dssp TCCCSS-SSSCCSEETTTEETTCTTEEESSCCBSS--------CHHHHHHHHHHHHHHHHTTSSCCC
T ss_pred CceecC-CCcccccccccccCCCCcEEEEeccccc--------cCchHHHHHHHHHHHHHcCCCCCc
Confidence 011111 111111111 1467899999887521 245555677888887776555443
No 269
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.02 E-value=4.4e-06 Score=80.90 Aligned_cols=39 Identities=26% Similarity=0.337 Sum_probs=37.2
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGA 145 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~ 145 (352)
++||+|||+|++|+++|+.|++. |++|+|+|+++.+||.
T Consensus 6 ~~~v~iiG~G~~gl~~a~~l~~~-g~~v~~~e~~~~~gg~ 44 (433)
T 1d5t_A 6 EYDVIVLGTGLTECILSGIMSVN-GKKVLHMDRNPYYGGE 44 (433)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCTT
T ss_pred cCCEEEECcCHHHHHHHHHHHHC-CCcEEEEecCCCcccc
Confidence 68999999999999999999999 9999999999988876
No 270
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.96 E-value=2e-05 Score=77.89 Aligned_cols=122 Identities=22% Similarity=0.300 Sum_probs=68.3
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcC-CccccCCCeEEEechHHHHHHH
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELG-IDYDEQDNYVVIKHAALFTSTI 184 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~G-i~~~~~~~~~~~~~~~~~~~~L 184 (352)
+..|||||||++|+.+|..|++. +++|+|||+++.. +..|.....- .| ++.. .. ... +
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~-~~~VtLId~~~~~-------~~~PlL~~va-~G~l~~~---~i--~~p-------~ 100 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTK-KYNVSIISPRSYF-------LFTPLLPSAP-VGTVDEK---SI--IEP-------I 100 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTT-TCEEEEEESSSEE-------ECGGGGGGTT-TTSSCGG---GG--EEE-------H
T ss_pred CCCEEEECCcHHHHHHHHHhhhC-CCcEEEECCCCCc-------ccccchhHHh-hccccHH---Hh--hhh-------H
Confidence 45799999999999999999998 9999999998631 1111100000 01 1110 00 000 1
Q ss_pred HHH-HHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceec----cCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 185 MSK-LLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSM----NHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 185 ~~~-~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~----~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
.+. ..++.+++++.. ++++|..++..|. +....+.... .......++..++..|++|+|||..+
T Consensus 101 ~~~~~~~~~~v~~~~~-~v~~ID~~~k~V~-l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~ 169 (502)
T 4g6h_A 101 VNFALKKKGNVTYYEA-EATSINPDRNTVT-IKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEP 169 (502)
T ss_dssp HHHHTTCSSCEEEEEE-EEEEEEGGGTEEE-EEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEE
T ss_pred HHHHHhhcCCeEEEEE-EEEEEEhhhCEEE-EeecccceeecccccccccccCCceEEeCCEEEEcCCccc
Confidence 111 123567888876 7888877666543 2110000000 00001123457899999999999754
No 271
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.95 E-value=5.1e-06 Score=81.61 Aligned_cols=40 Identities=48% Similarity=0.735 Sum_probs=37.3
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCC
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGA 145 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~ 145 (352)
..+||+|||||++|+++|+.|++. |++|+|+|+.+.+||.
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~-g~~v~vlE~~~~~gg~ 71 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGA-GHQVTVLEASERPGGR 71 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHH-TCEEEEECSSSSSBTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhC-CCeEEEEECCCCCCCc
Confidence 367999999999999999999999 9999999999988875
No 272
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.91 E-value=3.9e-06 Score=78.51 Aligned_cols=34 Identities=35% Similarity=0.590 Sum_probs=31.6
Q ss_pred cEEEECCcHHHHHHHHHHhcCCC------CcEEEEeccCCC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPN------VQVAIIEQSVSP 142 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G------~kV~viEk~~~~ 142 (352)
||+|||||++|+++|+.|+++ | ++|+|||+....
T Consensus 2 dVvIIGgGi~Gls~A~~La~~-G~~~~p~~~V~vlE~~~~~ 41 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHER-YHSVLQPLDIKVYADRFTP 41 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-HTTTSSSCEEEEEESSCGG
T ss_pred cEEEECCCHHHHHHHHHHHHh-ccccCCCceEEEEECCCCC
Confidence 899999999999999999999 7 999999998643
No 273
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.85 E-value=7.6e-05 Score=68.49 Aligned_cols=164 Identities=14% Similarity=0.165 Sum_probs=115.9
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHHH
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIMS 186 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~~ 186 (352)
-.++|||+|..|+.+|..|++. |.+|+++++.+.... .... .+
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~~-~~~v~~~~~~~~~~~--------------------------------~~~~----~~ 197 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEPI-AKEVSIIHRRDKFRA--------------------------------HEHS----VE 197 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTTT-BSEEEEECSSSSCSS--------------------------------CHHH----HH
T ss_pred CEEEEECCCHhHHHHHHHHHhh-CCeEEEEEecCcCCc--------------------------------cHHH----HH
Confidence 4799999999999999999999 999999998764311 0111 22
Q ss_pred HHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCccccccc
Q 039605 187 KLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDMN 266 (352)
Q Consensus 187 ~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~~ 266 (352)
++. +.|++++.++.+.++..+++ +.++.+.++ .+++..++.+|.||+|+|..+.... ....++..+
T Consensus 198 ~l~-~~gv~~~~~~~v~~i~~~~~-~~~v~~~~~---------~~g~~~~~~~D~vv~a~G~~p~~~~---~~~~~~~~~ 263 (332)
T 3lzw_A 198 NLH-ASKVNVLTPFVPAELIGEDK-IEQLVLEEV---------KGDRKEILEIDDLIVNYGFVSSLGP---IKNWGLDIE 263 (332)
T ss_dssp HHH-HSSCEEETTEEEEEEECSSS-CCEEEEEET---------TSCCEEEEECSEEEECCCEECCCGG---GGGSSCCEE
T ss_pred HHh-cCCeEEEeCceeeEEecCCc-eEEEEEEec---------CCCceEEEECCEEEEeeccCCCchH---HhhcCcccc
Confidence 233 56999999999999987655 445655431 1123568999999999996553322 122223334
Q ss_pred cccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHHcCCCC
Q 039605 267 TAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPN 325 (352)
Q Consensus 267 ~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~l~~~~ 325 (352)
.+...+.++.++..|++|++||++... +.++ .+..++.+|..||..|.++|.+..
T Consensus 264 ~g~i~vd~~~~t~~~~vya~GD~~~~~-~~~~---~~~~A~~~g~~aa~~i~~~l~~~~ 318 (332)
T 3lzw_A 264 KNSIVVKSTMETNIEGFFAAGDICTYE-GKVN---LIASGFGEAPTAVNNAKAYMDPKA 318 (332)
T ss_dssp TTEEECCTTSBCSSTTEEECGGGEECT-TCCC---CHHHHHHHHHHHHHHHHHHHCTTS
T ss_pred CCeEEeCCCCceecCCEEEccceecCC-CCcc---eEeeehhhHHHHHHHHHHhhChhh
Confidence 566666677788999999999998532 2233 244567899999999999997754
No 274
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.82 E-value=2.1e-05 Score=79.42 Aligned_cols=57 Identities=25% Similarity=0.264 Sum_probs=49.2
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcC
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELG 162 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~G 162 (352)
++|||+|||+|..|...|..|++. |++|++|||++..||.+....-.....|+.++.
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~-g~~vl~id~~~~~gg~~~~~~l~~l~~w~~~~~ 63 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRS-GQRVLHVDSRSYYGGNWASFSFSGLLSWLKEYQ 63 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSSSSCGGGCEECHHHHHHHHHHTC
T ss_pred CcCCEEEECCcHHHHHHHHHHHhC-CCEEEEEcCCCcccCccccccHHHHHHHHHHhh
Confidence 379999999999999999999999 999999999999999866655555667777654
No 275
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.81 E-value=1.4e-05 Score=78.08 Aligned_cols=39 Identities=36% Similarity=0.606 Sum_probs=35.9
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCC-cEEEEeccCCCCCC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNV-QVAIIEQSVSPGGA 145 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~-kV~viEk~~~~GG~ 145 (352)
.+||+|||+|++|+++|+.|++. |+ +|+|+|+++.+||.
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~-g~~~v~~~e~~~~~gg~ 43 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEA-GITDLLILEATDHIGGR 43 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHT-TCCCEEEECSSSSSBTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhc-CCCceEEEeCCCCCCCc
Confidence 57999999999999999999999 98 89999999888875
No 276
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.79 E-value=5.4e-05 Score=77.35 Aligned_cols=87 Identities=13% Similarity=0.071 Sum_probs=54.1
Q ss_pred CCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCccccccccccc
Q 039605 191 RPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDMNTAED 270 (352)
Q Consensus 191 ~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~~~g~~ 270 (352)
+.||+++.++.+.++. ++.+. +. .+ |+..++.+|.||+|+|..+.... + .
T Consensus 585 ~~GV~v~~~~~v~~i~--~~~v~-~~-~~------------G~~~~i~~D~Vi~a~G~~p~~~l--------~--~---- 634 (671)
T 1ps9_A 585 SRGVKMIPGVSYQKID--DDGLH-VV-IN------------GETQVLAVDNVVICAGQEPNRAL--------A--Q---- 634 (671)
T ss_dssp HTTCEEECSCEEEEEE--TTEEE-EE-ET------------TEEEEECCSEEEECCCEEECCTT--------H--H----
T ss_pred hcCCEEEeCcEEEEEe--CCeEE-Ee-cC------------CeEEEEeCCEEEECCCccccHHH--------H--H----
Confidence 5799999999998875 33321 11 22 12368999999999996533211 0 0
Q ss_pred eeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHH
Q 039605 271 AIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLA 317 (352)
Q Consensus 271 ~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i 317 (352)
......+.+|+.||+.... + .....++.+|..+|..|
T Consensus 635 ----~l~~~g~~v~aiGD~~~~~---~---~~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 635 ----PLIDSGKTVHLIGGCDVAM---E---LDARRAIAQGTRLALEI 671 (671)
T ss_dssp ----HHHTTTCCEEECGGGTCCS---S---CCHHHHHHHHHHHHHHC
T ss_pred ----HHHhcCCCEEEECCcCccC---c---hhHHHHHHHHHHHHHhC
Confidence 0111236799999997532 1 12445678888888753
No 277
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.68 E-value=2.9e-05 Score=79.24 Aligned_cols=40 Identities=25% Similarity=0.534 Sum_probs=36.9
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCC
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGA 145 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~ 145 (352)
..+||+|||+|++|+++|+.|++. |++|+|+|+.+.+||.
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~-g~~v~~~e~~~~~gg~ 145 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSF-GMDVTLLEARDRVGGR 145 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHT-TCEEEEECSSSSSBTT
T ss_pred CCCeEEEECcCHHHHHHHHHHHHC-CCeEEEEecCCCCCCc
Confidence 357999999999999999999999 9999999999888874
No 278
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.63 E-value=4.1e-05 Score=80.10 Aligned_cols=39 Identities=26% Similarity=0.551 Sum_probs=36.6
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGA 145 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~ 145 (352)
.+||+|||+|++||+||+.|++. |++|+|+|+.+.+||.
T Consensus 278 ~~~v~viG~G~aGl~~A~~l~~~-g~~v~v~E~~~~~GG~ 316 (852)
T 2xag_A 278 TGKVIIIGSGVSGLAAARQLQSF-GMDVTLLEARDRVGGR 316 (852)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSCTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCcEEEEEecCcCCCc
Confidence 57999999999999999999999 9999999999888874
No 279
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.51 E-value=6.4e-05 Score=74.20 Aligned_cols=36 Identities=22% Similarity=0.323 Sum_probs=33.5
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCC
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVS 141 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~ 141 (352)
.+||++|||+|++|+.+|++|++. |++|+|||++..
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~-~~~v~~~e~~~~ 39 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEA-GVQTLMLEMGQL 39 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhC-CCcEEEEeCCCC
Confidence 368999999999999999999998 999999999864
No 280
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.43 E-value=8.6e-05 Score=73.33 Aligned_cols=35 Identities=20% Similarity=0.424 Sum_probs=32.9
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.+||++|||+|++|+.+|.+|++. |++|+|||++.
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~-~~~v~~~e~~~ 44 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQA-GIPTQIVEMGR 44 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHT-TCCEEEECSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHC-CCcEEEEECCC
Confidence 478999999999999999999998 99999999975
No 281
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.37 E-value=0.00053 Score=61.69 Aligned_cols=151 Identities=9% Similarity=0.046 Sum_probs=104.5
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHH
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIM 185 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~ 185 (352)
...|+|||+|..|+.+|..|++. | +|+++++.... + .. .+.
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~-g-~v~~v~~~~~~----------------------~-----------~~----~~~ 181 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDW-G-ETTFFTNGIVE----------------------P-----------DA----DQH 181 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGT-S-EEEEECTTTCC----------------------C-----------CH----HHH
T ss_pred CCEEEEEecCccHHHHHHHhhhc-C-cEEEEECCCCC----------------------C-----------CH----HHH
Confidence 34799999999999999999999 8 99999986520 0 01 122
Q ss_pred HHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCcccccc
Q 039605 186 SKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDM 265 (352)
Q Consensus 186 ~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~ 265 (352)
+.+. +.|++++. +.+.++..++ .+.+.+ ..++.+|.||+|+|..+.... ....++..
T Consensus 182 ~~l~-~~gv~i~~-~~v~~i~~~~----~v~~~~--------------g~~~~~D~vi~a~G~~p~~~~---~~~~g~~~ 238 (297)
T 3fbs_A 182 ALLA-ARGVRVET-TRIREIAGHA----DVVLAD--------------GRSIALAGLFTQPKLRITVDW---IEKLGCAV 238 (297)
T ss_dssp HHHH-HTTCEEEC-SCEEEEETTE----EEEETT--------------SCEEEESEEEECCEEECCCSC---HHHHTCCE
T ss_pred HHHH-HCCcEEEc-ceeeeeecCC----eEEeCC--------------CCEEEEEEEEEccCcccCchh---HHhcCCcc
Confidence 3333 56999986 7888875432 455533 257999999999996543322 11122222
Q ss_pred c---cc-cceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHHcCCCC
Q 039605 266 N---TA-EDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPN 325 (352)
Q Consensus 266 ~---~g-~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~l~~~~ 325 (352)
+ .| ...+.++.++..|++|++||+... ++ .+..++.+|..||..|.++|...+
T Consensus 239 ~~~~~G~~i~vd~~~~t~~~~vya~GD~~~~----~~---~~~~A~~~g~~aa~~i~~~l~~~~ 295 (297)
T 3fbs_A 239 EEGPMGSTIVTDPMKQTTARGIFACGDVARP----AG---SVALAVGDGAMAGAAAHRSILFPE 295 (297)
T ss_dssp EEETTEEEECCCTTCBCSSTTEEECSGGGCT----TC---CHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred ccCCCCceEEeCCCCccCCCCEEEEeecCCc----hH---HHHHHHHhHHHHHHHHHHHHhhhh
Confidence 2 23 445557778899999999999853 22 345568899999999999997643
No 282
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.35 E-value=0.00042 Score=68.90 Aligned_cols=35 Identities=17% Similarity=0.314 Sum_probs=32.2
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVS 141 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~ 141 (352)
.-.|+|||+|..|+-+|..|++. +.+|+++++.+.
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~-~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPE-VEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTT-CSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHhh-CCEEEEEECCCC
Confidence 34799999999999999999999 999999999865
No 283
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.09 E-value=0.0064 Score=60.42 Aligned_cols=34 Identities=15% Similarity=0.315 Sum_probs=31.8
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVS 141 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~ 141 (352)
-.|+|||+|..|+-+|..|++. +.+|+|+++.+.
T Consensus 186 krV~VIG~G~tgve~a~~la~~-~~~Vtv~~r~~~ 219 (545)
T 3uox_A 186 KRVGVIGTGATGVQIIPIAAET-AKELYVFQRTPN 219 (545)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT-BSEEEEEESSCC
T ss_pred CeEEEECCCccHHHHHHHHHhh-CCEEEEEEcCCC
Confidence 4799999999999999999999 999999999875
No 284
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.07 E-value=0.00016 Score=74.02 Aligned_cols=36 Identities=28% Similarity=0.554 Sum_probs=33.3
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCC--------CcEEEEeccC-CC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPN--------VQVAIIEQSV-SP 142 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G--------~kV~viEk~~-~~ 142 (352)
..+|+|||||++||+||+.|++. | ++|+|+|+.+ .+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~-g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRL-AATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHH-HTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CcccccCCCceEEEEeccCccc
Confidence 35899999999999999999998 8 9999999998 77
No 285
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=96.75 E-value=0.0026 Score=57.89 Aligned_cols=153 Identities=13% Similarity=0.079 Sum_probs=106.4
Q ss_pred ccEEEECCcH-HHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccCCCeEEEechHHHHHHHH
Q 039605 107 TDVVVVGAGS-AGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQDNYVVIKHAALFTSTIM 185 (352)
Q Consensus 107 ~DVvIIGgG~-aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~~~~L~ 185 (352)
..++|||||. +++.+|..+.+. |.+|+++++..... ..+.
T Consensus 147 ~~~~VIggG~~~~~e~a~~~~~~-~~~v~i~~~~~~~~--------------------------------------~~~~ 187 (304)
T 4fk1_A 147 QPLIIISENEDHTLHMTKLVYNW-STDLVIATNGNELS--------------------------------------QTIM 187 (304)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTT-CSCEEEECSSCCCC--------------------------------------HHHH
T ss_pred CceeeecCCCchhhhHHHHHHhC-CceEEEEeccccch--------------------------------------hhhh
Confidence 4678888775 567888888888 99999998764321 1123
Q ss_pred HHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCCCCCCCCCCCcccccc
Q 039605 186 SKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDGPFGATGVRGMKALDM 265 (352)
Q Consensus 186 ~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~~~~~~g~~g~~~~~~ 265 (352)
+.+. +.|++++.+ .+..+..+++++.++.+.+ ..++.++.+|++.|+..+... ....++.+
T Consensus 188 ~~l~-~~g~~~~~~-~v~~~~~~~~~~~~v~~~~--------------g~~i~~~~~vi~~g~~~~~~~---~~~~g~~~ 248 (304)
T 4fk1_A 188 DELS-NKNIPVITE-SIRTLQGEGGYLKKVEFHS--------------GLRIERAGGFIVPTFFRPNQF---IEQLGCEL 248 (304)
T ss_dssp HHHH-TTTCCEECS-CEEEEESGGGCCCEEEETT--------------SCEECCCEEEECCEEECSSCH---HHHTTCCC
T ss_pred hhhh-ccceeEeee-eEEEeecCCCeeeeeeccc--------------cceeeecceeeeeccccCChh---hhhcCeEE
Confidence 3333 568888877 4677766667777777754 257889999998887655321 11223333
Q ss_pred c-cccceeecccccccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHHcCC
Q 039605 266 N-TAEDAIVKLTREIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQ 323 (352)
Q Consensus 266 ~-~g~~~vv~~~~~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~l~~ 323 (352)
+ .|.+.+.++++|+.||+|++||++... +++ +..|+.+|++||.+|.+||.+
T Consensus 249 ~~~G~I~vd~~~~Ts~p~IyA~GDv~~~~---~~~---~~~A~~~G~~AA~~i~~~L~~ 301 (304)
T 4fk1_A 249 QSNGTFVIDDFGRTSEKNIYLAGETTTQG---PSS---LIIAASQGNKAAIAINSDITD 301 (304)
T ss_dssp CTTSSSCSSTTCBCSSTTEEECSHHHHTS---CCC---HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEECcCCccCCCCEEEEeccCCCc---chH---HHHHHHHHHHHHHHHHHHHhh
Confidence 3 456677788999999999999998642 233 334578999999999999853
No 286
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=96.49 E-value=0.01 Score=59.01 Aligned_cols=34 Identities=26% Similarity=0.433 Sum_probs=31.7
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVS 141 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~ 141 (352)
-.|+|||+|..|+-+|..|++. +.+|+++++.+.
T Consensus 192 krV~VIG~G~sgve~a~~l~~~-~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 192 KRVGVIGTGSSGIQSIPIIAEQ-AEQLFVFQRSAN 225 (549)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-BSEEEEEESSCC
T ss_pred CEEEEECCCchHHHHHHHHHhh-CCEEEEEECCCC
Confidence 4799999999999999999999 999999999874
No 287
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=95.89 E-value=0.013 Score=58.13 Aligned_cols=34 Identities=24% Similarity=0.486 Sum_probs=31.1
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVS 141 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~ 141 (352)
..|+|||+|..|+-.|..|++. |.+|+++++.+.
T Consensus 187 k~V~VIG~G~sg~e~a~~l~~~-~~~vtv~~r~~~ 220 (542)
T 1w4x_A 187 QRVGVIGTGSSGIQVSPQIAKQ-AAELFVFQRTPH 220 (542)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-BSEEEEEESSCC
T ss_pred CEEEEECCCccHHHHHHHHhhc-CceEEEEEcCCc
Confidence 4799999999999999999999 999999998753
No 288
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=95.41 E-value=0.013 Score=53.19 Aligned_cols=35 Identities=17% Similarity=0.270 Sum_probs=32.2
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSP 142 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~ 142 (352)
-.|+|||||..|+-+|..|++. |.+|+|||+.+..
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~-g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKF-ADKVTIVHRRDEL 180 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT-CSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhc-CCEEEEEeccccc
Confidence 3799999999999999999999 9999999998754
No 289
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.25 E-value=0.022 Score=45.53 Aligned_cols=33 Identities=21% Similarity=0.384 Sum_probs=30.8
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
-.|+|+|+|..|...|..|.+. |++|+++|+++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~-g~~v~vid~~~ 40 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLAS-DIPLVVIETSR 40 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-TCCEEEEESCH
T ss_pred CCEEEECcCHHHHHHHHHHHHC-CCCEEEEECCH
Confidence 3799999999999999999999 99999999874
No 290
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.05 E-value=0.022 Score=45.33 Aligned_cols=32 Identities=22% Similarity=0.457 Sum_probs=30.1
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.++|+|+|..|...|..|.+. |++|+++|+++
T Consensus 8 ~v~I~G~G~iG~~la~~L~~~-g~~V~~id~~~ 39 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTAA-GKKVLAVDKSK 39 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCeEEEEECCH
Confidence 699999999999999999999 99999999863
No 291
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.96 E-value=0.024 Score=46.11 Aligned_cols=33 Identities=21% Similarity=0.332 Sum_probs=30.5
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
..|+|+|+|..|...|..|.+. |.+|+++++..
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~-g~~V~vid~~~ 52 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSS-GHSVVVVDKNE 52 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCG
T ss_pred CcEEEECCCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 4699999999999999999999 99999999864
No 292
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=94.69 E-value=0.028 Score=50.80 Aligned_cols=34 Identities=26% Similarity=0.429 Sum_probs=31.4
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVS 141 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~ 141 (352)
..|+|||+|..|+-+|..|++. |.+|+|+++...
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~-G~~Vt~v~~~~~ 186 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKY-GSKVIILHRRDA 186 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTT-SSEEEEECSSSS
T ss_pred CeEEEECCChHHHHHHHHHHHh-CCeeeeeccccc
Confidence 4799999999999999999999 999999998754
No 293
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=94.68 E-value=0.028 Score=54.79 Aligned_cols=60 Identities=25% Similarity=0.354 Sum_probs=43.8
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCcccc
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDE 167 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~ 167 (352)
-.|+|||+|..|+.+|..|++. |.+|+++|+.+.........+.....+.+++.|+.+..
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gV~v~~ 258 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARL-GAKVTVVEFLDTILGGMDGEVAKQLQRMLTKQGIDFKL 258 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH-TCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEEC
T ss_pred CeEEEECCCHHHHHHHHHHHHc-CCEEEEEeccccccccCCHHHHHHHHHHHHhCCCEEEE
Confidence 4799999999999999999999 99999999987654321111122234556677887654
No 294
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.48 E-value=0.039 Score=43.40 Aligned_cols=32 Identities=19% Similarity=0.438 Sum_probs=29.7
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.|+|||+|..|...|..|.+. |.+|+++|+..
T Consensus 6 ~i~IiG~G~iG~~~a~~L~~~-g~~v~~~d~~~ 37 (140)
T 1lss_A 6 YIIIAGIGRVGYTLAKSLSEK-GHDIVLIDIDK 37 (140)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 699999999999999999999 99999999853
No 295
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.48 E-value=0.048 Score=44.14 Aligned_cols=32 Identities=13% Similarity=0.312 Sum_probs=30.0
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEecc
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQS 139 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~ 139 (352)
-.++|+|+|..|...+..|.+. |.+|+++|+.
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~-g~~V~vid~~ 35 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQR-GQNVTVISNL 35 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-TCCEEEEECC
T ss_pred CcEEEECCCHHHHHHHHHHHHC-CCCEEEEECC
Confidence 3699999999999999999999 9999999986
No 296
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=94.41 E-value=0.05 Score=52.54 Aligned_cols=50 Identities=24% Similarity=0.250 Sum_probs=39.1
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCcc
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDY 165 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~ 165 (352)
..|.|||.|.+|+++|..|.++ |++|.+.|+... ...+..+.|++.|+++
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~-G~~V~~~D~~~~--------~~~~~~~~L~~~gi~~ 59 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKL-GAIVTVNDGKPF--------DENPTAQSLLEEGIKV 59 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHT-TCEEEEEESSCG--------GGCHHHHHHHHTTCEE
T ss_pred CEEEEEeeCHHHHHHHHHHHhC-CCEEEEEeCCcc--------cCChHHHHHHhCCCEE
Confidence 4699999999999999999999 999999998642 0123445667777654
No 297
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.03 E-value=0.049 Score=42.94 Aligned_cols=31 Identities=23% Similarity=0.339 Sum_probs=29.3
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEecc
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQS 139 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~ 139 (352)
.|+|+|+|..|...|..|.+. |.+|+++++.
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~-g~~v~~~d~~ 38 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRM-GHEVLAVDIN 38 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCCEEEESC
T ss_pred cEEEECCCHHHHHHHHHHHHC-CCEEEEEeCC
Confidence 599999999999999999999 9999999975
No 298
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=93.85 E-value=0.071 Score=50.58 Aligned_cols=60 Identities=23% Similarity=0.308 Sum_probs=43.3
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCC-cceeecchHHHHHHHcCCcccc
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGA-SGSVVRKPAHLFLDELGIDYDE 167 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~-~~~~~~~~~~~~l~~~Gi~~~~ 167 (352)
-.++|||+|..|+.+|..|++. |.+|+++|+.+.+... ....+.....+.+++.|+.+..
T Consensus 153 ~~vvViGgG~~g~e~A~~l~~~-g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~ 213 (415)
T 3lxd_A 153 KNAVVIGGGYIGLEAAAVLTKF-GVNVTLLEALPRVLARVAGEALSEFYQAEHRAHGVDLRT 213 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSSSTTTTTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhc-CCeEEEEecCCchhhhhcCHHHHHHHHHHHHhCCCEEEE
Confidence 3799999999999999999999 9999999998765321 1111112234556677887654
No 299
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=93.74 E-value=0.063 Score=40.75 Aligned_cols=32 Identities=25% Similarity=0.452 Sum_probs=29.5
Q ss_pred cEEEECCcHHHHHHHHHHhcCCC-CcEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPN-VQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G-~kV~viEk~~ 140 (352)
.|+|+|+|..|...+..|.+. | .+|+++++..
T Consensus 7 ~v~I~G~G~iG~~~~~~l~~~-g~~~v~~~~r~~ 39 (118)
T 3ic5_A 7 NICVVGAGKIGQMIAALLKTS-SNYSVTVADHDL 39 (118)
T ss_dssp EEEEECCSHHHHHHHHHHHHC-SSEEEEEEESCH
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCceEEEEeCCH
Confidence 699999999999999999999 8 8999999863
No 300
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=93.45 E-value=0.091 Score=51.61 Aligned_cols=59 Identities=22% Similarity=0.317 Sum_probs=41.2
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCcccc
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDE 167 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~ 167 (352)
-.++|||+|..|+..|..|++. |.+|+++++...... ...-+.....+.+++.|+.+..
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~-G~~Vtlv~~~~~l~~-~d~~~~~~~~~~l~~~GV~v~~ 269 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGI-GLDVTVMVRSILLRG-FDQDMANKIGEHMEEHGIKFIR 269 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCSSTT-SCHHHHHHHHHHHHHTTCEEEE
T ss_pred CeEEEECCcHHHHHHHHHHHHc-CCeEEEEeccccccc-CCHHHHHHHHHHHHHCCCEEEe
Confidence 3699999999999999999999 999999998532211 1111112233556777887654
No 301
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=93.35 E-value=0.089 Score=50.74 Aligned_cols=62 Identities=16% Similarity=0.181 Sum_probs=44.9
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQ 168 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~ 168 (352)
...++|||+|..|+..|..+++. |.+|+++++.+.+.......+.....+.+++.|+++...
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~-g~~Vt~v~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~ 231 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGL-GVKTTLIYRGKEILSRFDQDMRRGLHAAMEEKGIRILCE 231 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECS
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEECC
Confidence 34799999999999999999999 999999999875432211111222345667788877654
No 302
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=93.19 E-value=0.093 Score=50.94 Aligned_cols=62 Identities=16% Similarity=0.123 Sum_probs=44.3
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQ 168 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~ 168 (352)
.-.++|||+|..|+..|..|++. |.+|+++++.+.........+.....+.+++.|+.+...
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~-g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~ 252 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGL-GVKTTLLHRGDLILRNFDYDLRQLLNDAMVAKGISIIYE 252 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEESS
T ss_pred CCcEEEECcCHHHHHHHHHHHHc-CCeEEEEECCCccccccCHHHHHHHHHHHHHCCCEEEeC
Confidence 34799999999999999999999 999999999875432211111222345566778876553
No 303
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=92.70 E-value=0.14 Score=49.64 Aligned_cols=59 Identities=24% Similarity=0.332 Sum_probs=41.4
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCcccc
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDE 167 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~ 167 (352)
-.++|||+|..|+.+|..|++. |.+|+++++...... ...-+.....+.+++.|+.+..
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~-g~~Vtlv~~~~~l~~-~d~~~~~~l~~~l~~~Gv~i~~ 246 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGL-GYEPTVMVRSIVLRG-FDQQMAELVAASMEERGIPFLR 246 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSCSSTT-SCHHHHHHHHHHHHHTTCCEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHc-CCEEEEEeCCCCCcc-cCHHHHHHHHHHHHhCCCEEEe
Confidence 4799999999999999999999 999999998532211 1111111234556777887654
No 304
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=92.66 E-value=0.1 Score=45.42 Aligned_cols=33 Identities=15% Similarity=0.332 Sum_probs=30.6
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEecc
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQS 139 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~ 139 (352)
...|+|||||..|...+..|.+. |.+|+||+..
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~-GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQE-GAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGG-CCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEECCC
Confidence 45799999999999999999999 9999999875
No 305
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=92.55 E-value=0.091 Score=45.15 Aligned_cols=32 Identities=19% Similarity=0.328 Sum_probs=29.9
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.|+|+|+|..|...|..|.+. |.+|+++|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~-g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSR-KYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHT-TCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 489999999999999999999 99999999864
No 306
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=92.22 E-value=0.091 Score=47.25 Aligned_cols=34 Identities=18% Similarity=0.587 Sum_probs=31.0
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
...|+|||||..|...+..|.+. |.+|+||+...
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~-Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPT-GCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGG-TCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhC-CCEEEEEcCCC
Confidence 34699999999999999999999 99999999764
No 307
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=91.86 E-value=0.12 Score=47.45 Aligned_cols=32 Identities=28% Similarity=0.445 Sum_probs=30.1
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.|.|||+|.-|...|..++.. |++|+|+|..+
T Consensus 8 ~VaViGaG~MG~giA~~~a~~-G~~V~l~D~~~ 39 (319)
T 3ado_A 8 DVLIVGSGLVGRSWAMLFASG-GFRVKLYDIEP 39 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEECSCH
T ss_pred eEEEECCcHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 699999999999999999999 99999999764
No 308
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=91.80 E-value=0.82 Score=44.54 Aligned_cols=34 Identities=21% Similarity=0.449 Sum_probs=29.3
Q ss_pred ccEEEECCcHHHHHHHHHHhcC-CCCcEEEEeccC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKN-PNVQVAIIEQSV 140 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~-~G~kV~viEk~~ 140 (352)
..|+|||+|.+|.-.+..|++. ++.+|.++-|.+
T Consensus 247 KrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~ 281 (501)
T 4b63_A 247 YNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDS 281 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSS
T ss_pred cEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCC
Confidence 4699999999999999999863 378999998875
No 309
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=91.66 E-value=0.15 Score=48.42 Aligned_cols=34 Identities=24% Similarity=0.337 Sum_probs=31.3
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
...|+|||+|..|+.+|..|... |.+|+++|+..
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRL-GAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHC-CCEEEEEcCCH
Confidence 45799999999999999999999 99999999875
No 310
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=91.66 E-value=0.29 Score=47.76 Aligned_cols=58 Identities=5% Similarity=0.025 Sum_probs=41.7
Q ss_pred HHHHHcCCCcEEEccceeEEEEEeC-C-EEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCC
Q 039605 185 MSKLLARPNVKLFNAVAAEDLIVKG-N-RVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHD 249 (352)
Q Consensus 185 ~~~~~~~~gv~i~~~t~v~~l~~~~-g-~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~ 249 (352)
+..+.++.|+++++++.|++|+.++ + +++||++.+. ++..++..+++|+.||+|+|++
T Consensus 228 l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~-------~g~~~~~~~v~A~~VIlaaG~~ 287 (504)
T 1n4w_A 228 LAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDT-------DGKLLATKEISCRYLFLGAGSL 287 (504)
T ss_dssp HHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECT-------TCCEEEEEEEEEEEEEECSHHH
T ss_pred HHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCC-------CCccceeEEEeeCEEEEccCCC
Confidence 3444446679999999999999985 4 8999987420 0000023679999999999976
No 311
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=91.59 E-value=0.32 Score=46.70 Aligned_cols=57 Identities=9% Similarity=0.049 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHcCCCcEEEccceeEEEEEe--CCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 178 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVK--GNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 178 ~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~--~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
..+.+.|.+.+. ..|++++++++|+++..+ ++++++|.+. ..++.||.||+|+|.++
T Consensus 242 ~~l~~al~~~~~-~~G~~i~~~~~V~~i~~~~~~~~~~~V~~~---------------g~~~~ad~VV~a~~~~~ 300 (453)
T 2bcg_G 242 GELPQGFARLSA-IYGGTYMLDTPIDEVLYKKDTGKFEGVKTK---------------LGTFKAPLVIADPTYFP 300 (453)
T ss_dssp THHHHHHHHHHH-HTTCEEECSCCCCEEEEETTTTEEEEEEET---------------TEEEECSCEEECGGGCG
T ss_pred HHHHHHHHHHHH-HcCCEEECCCEEEEEEEECCCCeEEEEEEC---------------CeEEECCEEEECCCccc
Confidence 466677777665 569999999999999998 8888888763 25799999999999874
No 312
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=91.58 E-value=0.17 Score=45.88 Aligned_cols=36 Identities=17% Similarity=0.242 Sum_probs=32.6
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSP 142 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~ 142 (352)
...++|||+|..|+.+|..|++. |.+|+++++....
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~-g~~v~~v~~~~~~ 208 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKY-GSKVFMLVRKDHL 208 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTT-SSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhc-CCEEEEEEcCCcc
Confidence 34799999999999999999999 9999999998754
No 313
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=91.50 E-value=0.14 Score=49.29 Aligned_cols=33 Identities=27% Similarity=0.554 Sum_probs=30.4
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVS 141 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~ 141 (352)
.|+|||.|.+|+++|..|+++ |++|++.|....
T Consensus 7 ~v~viG~G~~G~~~a~~l~~~-G~~v~~~D~~~~ 39 (439)
T 2x5o_A 7 NVVIIGLGLTGLSCVDFFLAR-GVTPRVMDTRMT 39 (439)
T ss_dssp CEEEECCHHHHHHHHHHHHTT-TCCCEEEESSSS
T ss_pred EEEEEeecHHHHHHHHHHHhC-CCEEEEEECCCC
Confidence 599999999999999999999 999999998654
No 314
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=91.33 E-value=0.18 Score=46.60 Aligned_cols=33 Identities=18% Similarity=0.356 Sum_probs=30.2
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCC-cEEEEeccC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNV-QVAIIEQSV 140 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~-kV~viEk~~ 140 (352)
..|.|||+|..|...|..|++. |+ +|+++|...
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~-g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR-ELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCh
Confidence 4799999999999999999998 88 999999864
No 315
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=91.12 E-value=0.18 Score=49.93 Aligned_cols=60 Identities=20% Similarity=0.345 Sum_probs=42.4
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCccccC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDYDEQ 168 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~~~~ 168 (352)
-.++|||||..|+..|..+++. |.+|+|+++...+.+-.. -+.....+.|++.|+.+...
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~l-G~~VTii~~~~~L~~~D~-ei~~~l~~~l~~~gi~~~~~ 283 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSL-GYDVTVAVRSIVLRGFDQ-QCAVKVKLYMEEQGVMFKNG 283 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-TCCEEEEESSCSSTTSCH-HHHHHHHHHHHHTTCEEEET
T ss_pred ceEEEECCCHHHHHHHHHHHhc-CCeEEEecccccccccch-hHHHHHHHHHHhhcceeecc
Confidence 3799999999999999999999 999999998654422110 01112345667778876543
No 316
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=91.11 E-value=0.36 Score=47.19 Aligned_cols=58 Identities=9% Similarity=0.014 Sum_probs=41.8
Q ss_pred HHHHHcCCCcEEEccceeEEEEEeC-C-EEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCC
Q 039605 185 MSKLLARPNVKLFNAVAAEDLIVKG-N-RVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHD 249 (352)
Q Consensus 185 ~~~~~~~~gv~i~~~t~v~~l~~~~-g-~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~ 249 (352)
+..+.++.|++++.++.|++|+.++ + +++||+..+. ++..++..+++|+.||+|+|++
T Consensus 233 l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~-------~g~~~~~~~~~A~~VIlaaGa~ 292 (507)
T 1coy_A 233 LAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDE-------QGNVVATKVVTADRVFFAAGSV 292 (507)
T ss_dssp HHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECT-------TSCEEEEEEEEEEEEEECSHHH
T ss_pred HHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCC-------CCcccccEEEEeCEEEEccCcc
Confidence 3444446689999999999999986 5 7999987420 0100013689999999999976
No 317
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=90.69 E-value=0.35 Score=44.44 Aligned_cols=47 Identities=23% Similarity=0.384 Sum_probs=36.8
Q ss_pred cEEEECCcHHHHH-HHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCcc
Q 039605 108 DVVVVGAGSAGLS-CAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDY 165 (352)
Q Consensus 108 DVvIIGgG~aGl~-aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~ 165 (352)
.|.|||.|.+|++ +|..|.++ |++|.+.|+.... +..+.|++.|+++
T Consensus 6 ~i~~iGiGg~Gms~~A~~L~~~-G~~V~~~D~~~~~----------~~~~~L~~~gi~v 53 (326)
T 3eag_A 6 HIHIIGIGGTFMGGLAAIAKEA-GFEVSGCDAKMYP----------PMSTQLEALGIDV 53 (326)
T ss_dssp EEEEESCCSHHHHHHHHHHHHT-TCEEEEEESSCCT----------THHHHHHHTTCEE
T ss_pred EEEEEEECHHHHHHHHHHHHhC-CCEEEEEcCCCCc----------HHHHHHHhCCCEE
Confidence 5899999999996 78888889 9999999987531 2345566667654
No 318
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=90.64 E-value=0.2 Score=47.18 Aligned_cols=35 Identities=29% Similarity=0.486 Sum_probs=32.1
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCC-cEEEEeccC
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNV-QVAIIEQSV 140 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~-kV~viEk~~ 140 (352)
.+..|||+|+|.+|+.+|..|... |. +|.++|+..
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~-Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAA-GATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHH-TCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHc-CCCeEEEEECCC
Confidence 467899999999999999999999 98 999999975
No 319
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=90.52 E-value=0.18 Score=47.51 Aligned_cols=47 Identities=15% Similarity=0.243 Sum_probs=37.9
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCcc
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGIDY 165 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~~ 165 (352)
...|+|||+|..|+.+|..|... |.+|+++|+... ..+.+.++|..+
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~~------------~l~~~~~lGa~~ 230 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRL-GAKTTGYDVRPE------------VAEQVRSVGAQW 230 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHH-TCEEEEECSSGG------------GHHHHHHTTCEE
T ss_pred CCEEEEECchHHHHHHHHHHHHC-CCEEEEEeCCHH------------HHHHHHHcCCeE
Confidence 45799999999999999999999 999999998742 234556666654
No 320
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=90.52 E-value=0.2 Score=46.04 Aligned_cols=32 Identities=28% Similarity=0.445 Sum_probs=30.1
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.|.|||+|.-|...|..+++. |++|+++|+.+
T Consensus 8 kI~vIGaG~MG~~iA~~la~~-G~~V~l~d~~~ 39 (319)
T 2dpo_A 8 DVLIVGSGLVGRSWAMLFASG-GFRVKLYDIEP 39 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEECSCH
T ss_pred eEEEEeeCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 699999999999999999999 99999999864
No 321
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=90.50 E-value=0.25 Score=47.21 Aligned_cols=57 Identities=11% Similarity=0.084 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHcCCCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCCC
Q 039605 178 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHDG 250 (352)
Q Consensus 178 ~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~~ 250 (352)
..+.+.|.+.+. +.|++++++++|+++..+++++.++..+ ..++.||.||+|+|.+.
T Consensus 234 ~~l~~~l~~~~~-~~G~~i~~~~~V~~I~~~~~~v~~v~~~---------------g~~~~ad~VV~a~~~~~ 290 (433)
T 1d5t_A 234 GELPQGFARLSA-IYGGTYMLNKPVDDIIMENGKVVGVKSE---------------GEVARCKQLICDPSYVP 290 (433)
T ss_dssp THHHHHHHHHHH-HHTCCCBCSCCCCEEEEETTEEEEEEET---------------TEEEECSEEEECGGGCG
T ss_pred HHHHHHHHHHHH-HcCCEEECCCEEEEEEEeCCEEEEEEEC---------------CeEEECCEEEECCCCCc
Confidence 456677666665 4589999999999999999988877652 25799999999999764
No 322
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=90.42 E-value=0.2 Score=44.28 Aligned_cols=33 Identities=18% Similarity=0.449 Sum_probs=30.2
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCC-cEEEEeccC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNV-QVAIIEQSV 140 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~-kV~viEk~~ 140 (352)
..|+|||+|..|..+|..|++. |. +++|+|+..
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~-Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASA-GVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHc-CCCeEEEEcCCC
Confidence 4799999999999999999999 87 899999875
No 323
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=90.12 E-value=0.26 Score=46.05 Aligned_cols=33 Identities=30% Similarity=0.393 Sum_probs=30.2
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
-.|+|+|+|.+|+.++..|... |.+|+++++..
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~-Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGL-GAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 4799999999999999999999 99999999863
No 324
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=90.12 E-value=0.24 Score=47.01 Aligned_cols=34 Identities=26% Similarity=0.352 Sum_probs=30.7
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
...|+|||+|.+|+.++..|... |.+|+++|+..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~-Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSL-GAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCH
Confidence 35799999999999999999989 99999999864
No 325
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=90.02 E-value=0.26 Score=45.03 Aligned_cols=32 Identities=22% Similarity=0.415 Sum_probs=30.0
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.|.|||+|.-|...|..|++. |.+|+++++..
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~-g~~V~~~~r~~ 35 (320)
T 3i83_A 4 NILVIGTGAIGSFYGALLAKT-GHCVSVVSRSD 35 (320)
T ss_dssp EEEEESCCHHHHHHHHHHHHT-TCEEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHhC-CCeEEEEeCCh
Confidence 699999999999999999999 99999999864
No 326
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=90.02 E-value=0.27 Score=44.17 Aligned_cols=32 Identities=22% Similarity=0.398 Sum_probs=30.1
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.|.|||+|.-|...|..+++. |++|+++|+..
T Consensus 6 kV~VIGaG~mG~~iA~~la~~-G~~V~l~d~~~ 37 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAFH-GFAVTAYDINT 37 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 699999999999999999999 99999999864
No 327
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=89.94 E-value=0.32 Score=43.97 Aligned_cols=32 Identities=25% Similarity=0.396 Sum_probs=29.9
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.|.|||+|.-|...|..|++. |++|+++|+..
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~-G~~V~~~d~~~ 48 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAAT-GHTVVLVDQTE 48 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 599999999999999999999 99999999864
No 328
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=89.83 E-value=0.17 Score=40.35 Aligned_cols=34 Identities=18% Similarity=0.275 Sum_probs=30.0
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
...|+|||+|..|...+..|.+. |.+|+++++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~-g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYP-QYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTT-TCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEEEEcCCH
Confidence 34799999999999999999988 99999998763
No 329
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=89.79 E-value=0.18 Score=48.86 Aligned_cols=32 Identities=22% Similarity=0.486 Sum_probs=30.1
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.|+|+|+|-.|...|..|.+. |.+|+|||+++
T Consensus 5 ~iiI~G~G~vG~~la~~L~~~-~~~v~vId~d~ 36 (461)
T 4g65_A 5 KIIILGAGQVGGTLAENLVGE-NNDITIVDKDG 36 (461)
T ss_dssp EEEEECCSHHHHHHHHHTCST-TEEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCCEEEEECCH
Confidence 599999999999999999999 99999999864
No 330
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=89.72 E-value=0.29 Score=46.16 Aligned_cols=34 Identities=24% Similarity=0.311 Sum_probs=30.8
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
...|+|+|+|.+|+.++..|... |.+|+++|+..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~-Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRL-GAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 45799999999999999999989 99999999864
No 331
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=89.39 E-value=0.27 Score=44.02 Aligned_cols=37 Identities=24% Similarity=0.304 Sum_probs=33.1
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPG 143 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~G 143 (352)
...|+|||+|..|+.+|..|++. |.+|+++++.+...
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~-g~~v~~~~~~~~~~ 190 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSY-STKVYLIHRRDTFK 190 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH-SSEEEEECSSSSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHh-CCeEEEEEeCCCCC
Confidence 35799999999999999999999 99999999987543
No 332
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=89.36 E-value=0.31 Score=40.35 Aligned_cols=34 Identities=21% Similarity=0.208 Sum_probs=29.1
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
-.|+|+|+|..|...|..|.+..|++|+++|+++
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 3699999999999999999863278999999864
No 333
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=89.34 E-value=0.3 Score=45.96 Aligned_cols=35 Identities=26% Similarity=0.355 Sum_probs=31.9
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCC-cEEEEeccC
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNV-QVAIIEQSV 140 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~-kV~viEk~~ 140 (352)
.+..|||+|+|.+|..+|..|... |. +|+++|+..
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~-G~~~I~v~Dr~G 226 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDL-GVKNVVAVDRKG 226 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHH-TCCEEEEEETTE
T ss_pred CCcEEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCC
Confidence 467899999999999999999999 88 799999974
No 334
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=89.02 E-value=0.28 Score=44.63 Aligned_cols=32 Identities=22% Similarity=0.382 Sum_probs=29.9
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.|.|||+|.-|...|..|++. |.+|+++++..
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~-g~~V~~~~r~~ 35 (312)
T 3hn2_A 4 RIAIVGAGALGLYYGALLQRS-GEDVHFLLRRD 35 (312)
T ss_dssp CEEEECCSTTHHHHHHHHHHT-SCCEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHHC-CCeEEEEEcCc
Confidence 699999999999999999999 99999999864
No 335
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=88.99 E-value=0.31 Score=46.45 Aligned_cols=32 Identities=16% Similarity=0.351 Sum_probs=30.1
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.|+|||.|..|...|..|.+. |.+|++||+++
T Consensus 6 ~viIiG~Gr~G~~va~~L~~~-g~~vvvId~d~ 37 (413)
T 3l9w_A 6 RVIIAGFGRFGQITGRLLLSS-GVKMVVLDHDP 37 (413)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEEECCH
T ss_pred eEEEECCCHHHHHHHHHHHHC-CCCEEEEECCH
Confidence 599999999999999999999 99999999864
No 336
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=88.98 E-value=0.36 Score=44.72 Aligned_cols=33 Identities=21% Similarity=0.469 Sum_probs=30.1
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVS 141 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~ 141 (352)
.|+|+|||..|..+++.+.+. |++|+++|.++.
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~-G~~vv~vd~~~~ 35 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKA-GMKVVLVDKNPQ 35 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEEESCTT
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCCC
Confidence 489999999999999999999 999999997653
No 337
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=88.75 E-value=0.37 Score=45.07 Aligned_cols=33 Identities=27% Similarity=0.408 Sum_probs=30.2
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
..|+|+|+|..|..+|..|... |.+|+++++..
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~-Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGM-GAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 4699999999999999999999 99999999763
No 338
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=88.71 E-value=0.38 Score=42.89 Aligned_cols=32 Identities=19% Similarity=0.362 Sum_probs=29.6
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEecc
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQS 139 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~ 139 (352)
..++|+|+|..|.++|..|++. |.+|+++++.
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~-G~~V~v~~R~ 151 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSL-DCAVTITNRT 151 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHc-CCEEEEEECC
Confidence 4699999999999999999999 9999999876
No 339
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=88.66 E-value=0.37 Score=43.80 Aligned_cols=32 Identities=19% Similarity=0.506 Sum_probs=29.6
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCC--cEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNV--QVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~--kV~viEk~~ 140 (352)
.|.|||+|..|...|..|++. |. +|+++++..
T Consensus 9 kI~IiGaG~vG~~~a~~l~~~-g~~~~V~l~d~~~ 42 (319)
T 1lld_A 9 KLAVIGAGAVGSTLAFAAAQR-GIAREIVLEDIAK 42 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCCh
Confidence 699999999999999999999 98 999999863
No 340
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=88.66 E-value=0.4 Score=42.65 Aligned_cols=32 Identities=19% Similarity=0.220 Sum_probs=29.8
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.|.|||+|..|...|..|++. |.+|+++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQ-GHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhC-CCCEEEEEcCc
Confidence 489999999999999999999 99999999875
No 341
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=88.63 E-value=0.43 Score=43.95 Aligned_cols=33 Identities=18% Similarity=0.411 Sum_probs=30.3
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCC-cEEEEeccC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNV-QVAIIEQSV 140 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~-kV~viEk~~ 140 (352)
..|.|||+|..|...|..|++. |+ +|+++|...
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~-g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQK-DLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCeEEEEECCH
Confidence 4799999999999999999999 88 999999864
No 342
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=88.53 E-value=0.43 Score=43.88 Aligned_cols=31 Identities=16% Similarity=0.367 Sum_probs=29.4
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEecc
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQS 139 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~ 139 (352)
.|.|||+|..|...|..|++. |.+|+++++.
T Consensus 5 kI~IiGaG~~G~~~a~~L~~~-g~~V~~~~r~ 35 (335)
T 3ghy_A 5 RICIVGAGAVGGYLGARLALA-GEAINVLARG 35 (335)
T ss_dssp CEEEESCCHHHHHHHHHHHHT-TCCEEEECCH
T ss_pred EEEEECcCHHHHHHHHHHHHC-CCEEEEEECh
Confidence 699999999999999999999 9999999975
No 343
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=88.20 E-value=0.43 Score=48.50 Aligned_cols=60 Identities=17% Similarity=0.083 Sum_probs=43.8
Q ss_pred ccEEEEC--CcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcc-eeecchHHHHHHHcCCcccc
Q 039605 107 TDVVVVG--AGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASG-SVVRKPAHLFLDELGIDYDE 167 (352)
Q Consensus 107 ~DVvIIG--gG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~-~~~~~~~~~~l~~~Gi~~~~ 167 (352)
-+|+||| +|..|+.+|..|++. |.+|+++++.+....... ........+.+++.|+.+..
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~-g~~Vtlv~~~~~l~~~~~~~~~~~~l~~~l~~~GV~i~~ 586 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQK-GYEVSIVTPGAQVSSWTNNTFEVNRIQRRLIENGVARVT 586 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHT-TCEEEEEESSSSTTGGGGGGTCHHHHHHHHHHTTCEEEE
T ss_pred CEEEEEcCCCCccHHHHHHHHHhC-CCeeEEEecccccccccccchhHHHHHHHHHHCCCEEEc
Confidence 3599999 999999999999999 999999999876543211 11122234567778887654
No 344
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=88.00 E-value=0.53 Score=40.15 Aligned_cols=33 Identities=12% Similarity=0.241 Sum_probs=30.5
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
..|.|||+|..|.+.|..|++. |.+|.++++..
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~-g~~V~~~~~~~ 52 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIA-GHEVTYYGSKD 52 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECTTC
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCH
Confidence 3699999999999999999999 99999999875
No 345
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=88.00 E-value=0.41 Score=43.81 Aligned_cols=33 Identities=27% Similarity=0.620 Sum_probs=28.9
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCC--cEEEEecc
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNV--QVAIIEQS 139 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~--kV~viEk~ 139 (352)
...|.|||+|..|...|+.|+.. |+ .+.++|..
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~-~~~~ei~L~Di~ 40 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQ-SIVDELVIIDLD 40 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-CSCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCC
Confidence 45799999999999999999987 74 79999864
No 346
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=87.77 E-value=0.47 Score=44.57 Aligned_cols=34 Identities=32% Similarity=0.543 Sum_probs=30.6
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
...|+|||+|..|..+|..|... |.+|+++++..
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~-Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGM-GATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 35699999999999999999999 99999999763
No 347
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=87.53 E-value=0.38 Score=43.40 Aligned_cols=32 Identities=25% Similarity=0.565 Sum_probs=29.9
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.|.|||+|.-|...|..|++. |.+|+++++..
T Consensus 4 kI~iiGaGa~G~~~a~~L~~~-g~~V~~~~r~~ 35 (294)
T 3g17_A 4 SVAIIGPGAVGTTIAYELQQS-LPHTTLIGRHA 35 (294)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-CTTCEEEESSC
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCeEEEEEecc
Confidence 699999999999999999999 99999999873
No 348
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=87.49 E-value=0.62 Score=42.66 Aligned_cols=32 Identities=25% Similarity=0.567 Sum_probs=30.0
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCC-cEEEEecc
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNV-QVAIIEQS 139 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~-kV~viEk~ 139 (352)
..|.|||+|..|...|+.|++. |+ .|+++|..
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~-g~~~v~l~D~~ 41 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQK-ELADVVLVDIP 41 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCG
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCeEEEEecc
Confidence 4799999999999999999999 99 99999986
No 349
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=87.47 E-value=0.49 Score=42.52 Aligned_cols=32 Identities=22% Similarity=0.399 Sum_probs=29.7
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.|.|||+|..|...|..|++. |.+|+++++..
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~r~~ 36 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQG-GNDVTLIDQWP 36 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred eEEEECcCHHHHHHHHHHHhC-CCcEEEEECCH
Confidence 599999999999999999999 99999999853
No 350
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=87.47 E-value=0.5 Score=42.96 Aligned_cols=32 Identities=22% Similarity=0.461 Sum_probs=29.2
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCC--cEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNV--QVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~--kV~viEk~~ 140 (352)
.|.|||+|..|...|..|+.. |+ +|.++|...
T Consensus 2 kI~VIGaG~vG~~la~~la~~-g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLR-GSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCCH
Confidence 489999999999999999999 88 999999763
No 351
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=87.43 E-value=0.54 Score=42.02 Aligned_cols=34 Identities=26% Similarity=0.516 Sum_probs=30.7
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
...++|||+|.+|.++++.|++. |.+|.|+.|..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~-G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQ-GLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 34799999999999999999999 89999998864
No 352
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=87.39 E-value=0.49 Score=42.88 Aligned_cols=34 Identities=29% Similarity=0.394 Sum_probs=30.6
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
++..|.|||+|.-|...|..|+ . |++|+++|+.+
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-a-G~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-S-KHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-T-TSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-c-CCEEEEEECCH
Confidence 4568999999999999999999 8 99999999864
No 353
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=87.31 E-value=0.49 Score=40.20 Aligned_cols=39 Identities=26% Similarity=0.234 Sum_probs=30.4
Q ss_pred cccCceeEecchhhhhcCCCCCCcchhhhhhchHHHHHHHHHHcCCC
Q 039605 278 EIVPGMIVAGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQP 324 (352)
Q Consensus 278 ~~~pg~~~aG~~~~~~~g~~r~g~~~~~~~~sG~~aA~~i~~~l~~~ 324 (352)
+..+++|++||+.. |+....|+.||..||+.|+++|+..
T Consensus 292 ~~~~~v~l~GDa~~--------g~gv~~A~~sG~~aA~~I~~~L~~e 330 (336)
T 3kkj_A 292 DADLGIYVCGDWCL--------SGRVEGAWLSGQEAARRLLEHLQLE 330 (336)
T ss_dssp ETTTTEEECCGGGT--------TSSHHHHHHHHHHHHHHHHHHTTC-
T ss_pred eCCCCEEEEecccC--------CcCHHHHHHHHHHHHHHHHHHhhcc
Confidence 35689999999753 2335567999999999999999753
No 354
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=87.16 E-value=0.45 Score=46.20 Aligned_cols=34 Identities=26% Similarity=0.433 Sum_probs=30.6
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.-.++|+|+|..|..+|..|+.. |.+|++.|+.+
T Consensus 265 GKtVvVtGaGgIG~aiA~~Laa~-GA~Viv~D~~~ 298 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALKQA-GARVIVTEIDP 298 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCH
Confidence 34699999999999999999999 99999998763
No 355
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=87.01 E-value=0.34 Score=41.93 Aligned_cols=31 Identities=26% Similarity=0.448 Sum_probs=29.0
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.++|+|+|..|...|..|.+. |. |+++|+++
T Consensus 11 ~viI~G~G~~G~~la~~L~~~-g~-v~vid~~~ 41 (234)
T 2aef_A 11 HVVICGWSESTLECLRELRGS-EV-FVLAEDEN 41 (234)
T ss_dssp EEEEESCCHHHHHHHHHSTTS-EE-EEEESCGG
T ss_pred EEEEECCChHHHHHHHHHHhC-Ce-EEEEECCH
Confidence 699999999999999999999 99 99999874
No 356
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=86.80 E-value=0.51 Score=45.55 Aligned_cols=32 Identities=16% Similarity=0.270 Sum_probs=29.9
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEecc
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQS 139 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~ 139 (352)
..|+|||+|..|...+..|.+. |.+|+|+++.
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~-ga~V~vi~~~ 44 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEA-GARLTVNALT 44 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TBEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-cCEEEEEcCC
Confidence 4699999999999999999999 9999999974
No 357
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=86.76 E-value=0.61 Score=42.24 Aligned_cols=32 Identities=13% Similarity=0.412 Sum_probs=29.4
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCC-cEEEEecc
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNV-QVAIIEQS 139 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~-kV~viEk~ 139 (352)
..++|||+|.+|.++|..|++. |. +|+|+.|.
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~-G~~~V~v~nR~ 174 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLST-AAERIDMANRT 174 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TCSEEEEECSS
T ss_pred CEEEEECcHHHHHHHHHHHHHC-CCCEEEEEeCC
Confidence 4699999999999999999999 97 89999876
No 358
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=86.75 E-value=0.58 Score=43.02 Aligned_cols=31 Identities=19% Similarity=0.246 Sum_probs=29.4
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEecc
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQS 139 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~ 139 (352)
.|.|||+|..|...|..|++. |.+|+++++.
T Consensus 6 ki~iiG~G~~G~~~a~~L~~~-g~~V~~~~r~ 36 (359)
T 1bg6_A 6 TYAVLGLGNGGHAFAAYLALK-GQSVLAWDID 36 (359)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCEEEEEeCC
Confidence 699999999999999999999 9999999985
No 359
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=86.74 E-value=0.41 Score=41.17 Aligned_cols=32 Identities=19% Similarity=0.330 Sum_probs=29.2
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEE-EeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAI-IEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~v-iEk~~ 140 (352)
.|.|||+|-.|...|..|++. |++|++ ++++.
T Consensus 25 kI~IIG~G~mG~~la~~l~~~-g~~V~~v~~r~~ 57 (220)
T 4huj_A 25 TYAIIGAGAIGSALAERFTAA-QIPAIIANSRGP 57 (220)
T ss_dssp CEEEEECHHHHHHHHHHHHHT-TCCEEEECTTCG
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCEEEEEECCCH
Confidence 699999999999999999999 999998 77754
No 360
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=86.70 E-value=0.56 Score=45.54 Aligned_cols=33 Identities=18% Similarity=0.350 Sum_probs=30.5
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
..|.|||.|..|+..|..|++. |.+|+++|+..
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~-G~~V~~~d~~~ 41 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADI-GHDVFCLDVDQ 41 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred ceEEEECcCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 4799999999999999999999 99999999753
No 361
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=86.64 E-value=0.6 Score=42.81 Aligned_cols=34 Identities=26% Similarity=0.350 Sum_probs=30.7
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEecc
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQS 139 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~ 139 (352)
++..|.|||+|.-|...|..|++. |.+|.++++.
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~-G~~V~~~~r~ 46 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHEN-GEEVILWARR 46 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSS
T ss_pred cCCcEEEECcCHHHHHHHHHHHhC-CCeEEEEeCC
Confidence 356899999999999999999999 9999999885
No 362
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=86.53 E-value=0.76 Score=42.77 Aligned_cols=33 Identities=21% Similarity=0.365 Sum_probs=30.5
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
..|.|||+|.-|.+.|..|++. |.+|.++++.+
T Consensus 30 mkI~VIGaG~mG~alA~~La~~-G~~V~l~~r~~ 62 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARK-GQKVRLWSYES 62 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTT-TCCEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 4799999999999999999999 99999999863
No 363
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=86.35 E-value=0.61 Score=44.92 Aligned_cols=32 Identities=31% Similarity=0.427 Sum_probs=30.1
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.|.|||.|..|+..|..|++. |++|++++++.
T Consensus 4 kI~VIG~G~vG~~lA~~La~~-G~~V~~~D~~~ 35 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAEL-GANVRCIDTDR 35 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHhc-CCEEEEEECCH
Confidence 699999999999999999999 99999999864
No 364
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=86.31 E-value=0.53 Score=42.94 Aligned_cols=32 Identities=28% Similarity=0.585 Sum_probs=29.7
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCC-cEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNV-QVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~-kV~viEk~~ 140 (352)
.|.|||+|..|...|..|++. |+ +|+++|...
T Consensus 6 kI~VIGaG~~G~~ia~~la~~-g~~~V~l~D~~~ 38 (317)
T 2ewd_A 6 KIAVIGSGQIGGNIAYIVGKD-NLADVVLFDIAE 38 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCceEEEEeCCc
Confidence 699999999999999999999 88 999999864
No 365
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=86.28 E-value=0.61 Score=45.05 Aligned_cols=32 Identities=25% Similarity=0.405 Sum_probs=29.9
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.|.|||+|.-|...|..|++. |++|+++|+..
T Consensus 39 kV~VIGaG~MG~~iA~~la~~-G~~V~l~D~~~ 70 (463)
T 1zcj_A 39 SVGVLGLGTMGRGIAISFARV-GISVVAVESDP 70 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTT-TCEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHhC-CCeEEEEECCH
Confidence 599999999999999999999 99999999864
No 366
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=86.02 E-value=0.5 Score=42.18 Aligned_cols=32 Identities=16% Similarity=0.369 Sum_probs=29.7
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEecc
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQS 139 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~ 139 (352)
..++|+|+|.+|.++|..|++. |.+|+|+.|.
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~-G~~v~v~~R~ 151 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQA-QQNIVLANRT 151 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHT-TCEEEEEESS
T ss_pred CEEEEECCcHHHHHHHHHHHHC-CCEEEEEECC
Confidence 4699999999999999999999 8999999886
No 367
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=85.98 E-value=0.71 Score=41.88 Aligned_cols=31 Identities=32% Similarity=0.639 Sum_probs=28.8
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.|.|||+|.-|...|..|+ . |.+|+++.+..
T Consensus 4 kI~IiGaGa~G~~~a~~L~-~-g~~V~~~~r~~ 34 (307)
T 3ego_A 4 KIGIIGGGSVGLLCAYYLS-L-YHDVTVVTRRQ 34 (307)
T ss_dssp EEEEECCSHHHHHHHHHHH-T-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHh-c-CCceEEEECCH
Confidence 6999999999999999999 8 99999999864
No 368
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=85.68 E-value=0.9 Score=41.44 Aligned_cols=32 Identities=22% Similarity=0.304 Sum_probs=30.3
Q ss_pred cEEEECCcHHHHHHHHHHhcCCC-CcEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPN-VQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G-~kV~viEk~~ 140 (352)
.|.|||.|.-|...|..|++. | .+|+++++..
T Consensus 26 ~IgvIG~G~mG~~lA~~L~~~-G~~~V~~~dr~~ 58 (317)
T 4ezb_A 26 TIAFIGFGEAAQSIAGGLGGR-NAARLAAYDLRF 58 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHTT-TCSEEEEECGGG
T ss_pred eEEEECccHHHHHHHHHHHHc-CCCeEEEEeCCC
Confidence 699999999999999999999 9 9999999874
No 369
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=85.63 E-value=0.74 Score=42.23 Aligned_cols=32 Identities=28% Similarity=0.413 Sum_probs=29.4
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCC-cEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNV-QVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~-kV~viEk~~ 140 (352)
.|.|||+|..|...|..|+.. |+ +|.++|...
T Consensus 6 kI~VIGaG~vG~~ia~~la~~-g~~~v~L~Di~~ 38 (322)
T 1t2d_A 6 KIVLVGSGMIGGVMATLIVQK-NLGDVVLFDIVK 38 (322)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCeEEEEeCCH
Confidence 699999999999999999998 88 999999764
No 370
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=85.49 E-value=0.77 Score=42.02 Aligned_cols=33 Identities=18% Similarity=0.426 Sum_probs=29.8
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCC-cEEEEecc
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNV-QVAIIEQS 139 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~-kV~viEk~ 139 (352)
...++|+|+|.+|.++|..|++. |. +|+|+.|.
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~-Ga~~V~i~nR~ 187 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALD-GVKEISIFNRK 187 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHT-TCSEEEEEECS
T ss_pred CCEEEEECCChHHHHHHHHHHHC-CCCEEEEEECC
Confidence 34699999999999999999999 98 89999886
No 371
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=85.39 E-value=0.89 Score=41.48 Aligned_cols=33 Identities=21% Similarity=0.321 Sum_probs=30.2
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCC--cEEEEeccC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNV--QVAIIEQSV 140 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~--kV~viEk~~ 140 (352)
..|.|||.|.-|.+.|..|.+. |+ +|.++++..
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~-G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRS-GFKGKIYGYDINP 68 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHT-TCCSEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHhC-CCCCEEEEEECCH
Confidence 4799999999999999999999 99 999999864
No 372
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=85.14 E-value=0.7 Score=41.48 Aligned_cols=33 Identities=21% Similarity=0.360 Sum_probs=30.0
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCC-cEEEEeccC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNV-QVAIIEQSV 140 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~-kV~viEk~~ 140 (352)
..++|+|+|.+|.+++..|++. |. +|.|+.|..
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~-G~~~v~v~~R~~ 151 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKI-VRPTLTVANRTM 151 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT-CCSCCEEECSCG
T ss_pred CEEEEECCcHHHHHHHHHHHHC-CCCEEEEEeCCH
Confidence 4799999999999999999999 98 899998864
No 373
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=85.10 E-value=0.76 Score=41.26 Aligned_cols=31 Identities=32% Similarity=0.677 Sum_probs=28.5
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEecc
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQS 139 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~ 139 (352)
..++|+|+|..|.++|..|++. | +|+++.+.
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~-G-~V~v~~r~ 159 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKD-N-NIIIANRT 159 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSS-S-EEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHC-C-CEEEEECC
Confidence 4699999999999999999999 9 99999875
No 374
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=85.10 E-value=0.95 Score=38.68 Aligned_cols=32 Identities=19% Similarity=0.256 Sum_probs=29.5
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.|.|||+|..|...|..|.+. |.+|.++++..
T Consensus 30 ~I~iiG~G~~G~~la~~l~~~-g~~V~~~~r~~ 61 (215)
T 2vns_A 30 KVGILGSGDFARSLATRLVGS-GFKVVVGSRNP 61 (215)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEEESSH
T ss_pred EEEEEccCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 699999999999999999999 99999998763
No 375
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=85.10 E-value=0.74 Score=44.44 Aligned_cols=33 Identities=15% Similarity=0.352 Sum_probs=30.7
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVS 141 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~ 141 (352)
.|.|||+|.-|...|..+++. |++|+++|+...
T Consensus 56 kVaVIGaG~MG~~IA~~la~a-G~~V~l~D~~~e 88 (460)
T 3k6j_A 56 SVAIIGGGTMGKAMAICFGLA-GIETFLVVRNEQ 88 (460)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHH
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCeEEEEECcHH
Confidence 699999999999999999999 999999998753
No 376
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=85.09 E-value=0.93 Score=38.29 Aligned_cols=32 Identities=16% Similarity=0.304 Sum_probs=29.2
Q ss_pred cEEEEC-CcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVG-AGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIG-gG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.|.||| +|..|...|..|++. |.+|.++++..
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~-g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATL-GHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTT-TCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 488999 999999999999999 99999999863
No 377
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=85.02 E-value=0.81 Score=41.17 Aligned_cols=33 Identities=30% Similarity=0.507 Sum_probs=29.6
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCC-cEEEEecc
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNV-QVAIIEQS 139 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~-kV~viEk~ 139 (352)
...++|+|+|.+|.+++..|++. |. +|+|+.|.
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~-G~~~v~i~~R~ 160 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTH-GVQKLQVADLD 160 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHC-CCCEEEEEECC
Confidence 45799999999999999999999 98 69999876
No 378
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=84.94 E-value=0.92 Score=41.66 Aligned_cols=33 Identities=15% Similarity=0.305 Sum_probs=30.0
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCC-cEEEEeccC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNV-QVAIIEQSV 140 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~-kV~viEk~~ 140 (352)
..|.|||+|..|.+.|..|+.. |+ .+.++|...
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~~-~~~~v~L~Di~~ 41 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGLK-ELGDVVLFDIAE 41 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCeEEEEeCCc
Confidence 3699999999999999999998 88 999999864
No 379
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=84.93 E-value=0.97 Score=41.44 Aligned_cols=33 Identities=21% Similarity=0.316 Sum_probs=29.8
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCC-cEEEEeccC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNV-QVAIIEQSV 140 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~-kV~viEk~~ 140 (352)
..|.|||+|..|.+.|..|+.. |+ ++.++|...
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~-~~~~v~l~Di~~ 39 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIK-QLGDVVLFDIAQ 39 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCceEEEEeCCh
Confidence 3699999999999999999998 77 999999864
No 380
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=84.91 E-value=0.83 Score=43.94 Aligned_cols=35 Identities=17% Similarity=0.343 Sum_probs=32.0
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVS 141 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~ 141 (352)
...+.|||.|..|+..|..|++. |++|++++++..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~-G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF-GHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC-CCEEEEEeCCHH
Confidence 46799999999999999999999 999999998753
No 381
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=84.90 E-value=0.6 Score=46.20 Aligned_cols=49 Identities=22% Similarity=0.329 Sum_probs=37.4
Q ss_pred cccccccCceeEecchhhhhcCCCCCCc-chhhhhhchHHHHHHHHHHcC
Q 039605 274 KLTREIVPGMIVAGMEVAEIDGAPRMGP-TFGAMMISGQKAAHLALKSLG 322 (352)
Q Consensus 274 ~~~~~~~pg~~~aG~~~~~~~g~~r~g~-~~~~~~~sG~~aA~~i~~~l~ 322 (352)
+...+.+||+|++|.+...++|.+|.+. ..+.++-.|++|++.+.++.+
T Consensus 515 ~~~g~~I~GLyAaGe~~~g~~g~~~~~g~sl~~~~v~Gr~Ag~~aa~~~~ 564 (566)
T 1qo8_A 515 DLQSKPIDGLFAAGEVTGGVHGYNRLGGNAIADTVVFGRIAGDNAAKHAL 564 (566)
T ss_dssp BTTSCEEEEEEECSTTBCSSSTTCCCTTHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCEeCCEEecccccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhh
Confidence 3445789999999999877888777643 334456779999999988764
No 382
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=84.63 E-value=0.92 Score=41.26 Aligned_cols=32 Identities=16% Similarity=0.394 Sum_probs=29.1
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCC-cEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNV-QVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~-kV~viEk~~ 140 (352)
.|.|||+|..|...|..|+.. |+ +|.++|...
T Consensus 4 kI~VIGaG~vG~~~a~~la~~-g~~~v~L~Di~~ 36 (309)
T 1ur5_A 4 KISIIGAGFVGSTTAHWLAAK-ELGDIVLLDIVE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCCeEEEEeCCc
Confidence 699999999999999999998 86 899999754
No 383
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=84.53 E-value=0.95 Score=39.99 Aligned_cols=32 Identities=31% Similarity=0.575 Sum_probs=29.5
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCC-cEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNV-QVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~-kV~viEk~~ 140 (352)
.++|||+|.+|.+++..|.+. |. +|.|+.|..
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~-G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQM-GVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHc-CCCEEEEEeCCH
Confidence 799999999999999999999 88 899998863
No 384
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=84.43 E-value=0.74 Score=40.57 Aligned_cols=34 Identities=21% Similarity=0.462 Sum_probs=30.0
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCC-cEEEEeccC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNV-QVAIIEQSV 140 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~-kV~viEk~~ 140 (352)
...|+|||+|..|..+|..|++. |. +++|+|...
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~-Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGA-GVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHT-TCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHc-CCCeEEEEeCCC
Confidence 45899999999999999999999 87 688998764
No 385
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=84.32 E-value=0.98 Score=41.29 Aligned_cols=33 Identities=24% Similarity=0.503 Sum_probs=29.5
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCC--cEEEEeccC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNV--QVAIIEQSV 140 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~--kV~viEk~~ 140 (352)
..|.|||+|..|...|+.|+.. |+ .+.++|...
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~-~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALR-QTANELVLIDVFK 42 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCSSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCCh
Confidence 4799999999999999999998 87 899999764
No 386
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=84.24 E-value=0.91 Score=40.56 Aligned_cols=32 Identities=25% Similarity=0.316 Sum_probs=30.0
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.|.|||.|..|...|..|++. |++|+++++..
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~-G~~V~~~dr~~ 34 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKA-GCSVTIWNRSP 34 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSG
T ss_pred EEEEEeecHHHHHHHHHHHHC-CCeEEEEcCCH
Confidence 589999999999999999999 99999999875
No 387
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=84.03 E-value=0.9 Score=41.22 Aligned_cols=32 Identities=22% Similarity=0.432 Sum_probs=30.3
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.|.|||.|.-|...|..|++. |++|+++++..
T Consensus 23 ~I~iIG~G~mG~~~A~~l~~~-G~~V~~~dr~~ 54 (310)
T 3doj_A 23 EVGFLGLGIMGKAMSMNLLKN-GFKVTVWNRTL 54 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSSG
T ss_pred EEEEECccHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 699999999999999999999 99999999875
No 388
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=84.02 E-value=0.94 Score=41.34 Aligned_cols=33 Identities=27% Similarity=0.590 Sum_probs=28.8
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCC--cEEEEeccC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNV--QVAIIEQSV 140 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~--kV~viEk~~ 140 (352)
..|.|||+|..|.+.|+.|+.. |+ ++.++|...
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~-~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQ-GIADEIVLIDANE 41 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CCCCEEEEEeCCc
Confidence 4799999999999999999887 65 799999753
No 389
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=83.99 E-value=0.88 Score=41.45 Aligned_cols=30 Identities=23% Similarity=0.424 Sum_probs=28.1
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEecc
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQS 139 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~ 139 (352)
.|.|||+|.-|...|..|++. |.+|+++ +.
T Consensus 21 kI~IiGaGa~G~~~a~~L~~~-G~~V~l~-~~ 50 (318)
T 3hwr_A 21 KVAIMGAGAVGCYYGGMLARA-GHEVILI-AR 50 (318)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-TCEEEEE-CC
T ss_pred cEEEECcCHHHHHHHHHHHHC-CCeEEEE-Ec
Confidence 699999999999999999999 9999999 54
No 390
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=83.89 E-value=1.1 Score=39.12 Aligned_cols=34 Identities=21% Similarity=0.318 Sum_probs=31.0
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
...|.|||.|.-|...|..|++. |++|++.++..
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~-G~~V~~~~r~~ 52 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADL-GHEVTIGTRDP 52 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCh
Confidence 34799999999999999999999 99999999864
No 391
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=83.89 E-value=1 Score=40.35 Aligned_cols=32 Identities=19% Similarity=0.377 Sum_probs=29.4
Q ss_pred ccEEEEC-CcHHHHHHHHHHhcCCCCcEEEEecc
Q 039605 107 TDVVVVG-AGSAGLSCAYEISKNPNVQVAIIEQS 139 (352)
Q Consensus 107 ~DVvIIG-gG~aGl~aA~~la~~~G~kV~viEk~ 139 (352)
..++|+| +|..|.++|..|++. |.+|+++.+.
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~-G~~V~i~~R~ 152 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGE-GAEVVLCGRK 152 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESS
T ss_pred CEEEEECCCcHHHHHHHHHHHHC-cCEEEEEECC
Confidence 4699999 999999999999999 9999999875
No 392
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=83.84 E-value=0.83 Score=43.59 Aligned_cols=34 Identities=26% Similarity=0.386 Sum_probs=30.9
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
...|+|||.|..|..+|..|... |.+|++.|+.+
T Consensus 220 GktV~ViG~G~IGk~vA~~Lra~-Ga~Viv~D~dp 253 (435)
T 3gvp_A 220 GKQVVVCGYGEVGKGCCAALKAM-GSIVYVTEIDP 253 (435)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC-CCEEEEEeCCh
Confidence 45799999999999999999999 99999999764
No 393
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=83.84 E-value=1 Score=41.65 Aligned_cols=34 Identities=21% Similarity=0.455 Sum_probs=30.2
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCC-cEEEEeccC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNV-QVAIIEQSV 140 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~-kV~viEk~~ 140 (352)
...|+|||+|..|..+|..|++. |. +++|+|...
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~a-GVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAW-GVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHc-CCCEEEEecCCE
Confidence 45799999999999999999999 86 688999764
No 394
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=83.74 E-value=1 Score=40.51 Aligned_cols=34 Identities=24% Similarity=0.392 Sum_probs=30.7
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
...|.|||.|..|..+|..|... |.+|+++++..
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~dr~~ 188 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAAL-GAKVKVGARES 188 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 45799999999999999999999 99999999763
No 395
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=83.73 E-value=1.1 Score=40.21 Aligned_cols=33 Identities=12% Similarity=0.354 Sum_probs=29.5
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCC-cEEEEecc
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNV-QVAIIEQS 139 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~-kV~viEk~ 139 (352)
...++|+|+|.+|.+.+..|++. |. +|.|+.|.
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~~-G~~~v~v~~R~ 159 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLDQ-QPASITVTNRT 159 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-CCSEEEEEESS
T ss_pred CCEEEEECchHHHHHHHHHHHhc-CCCeEEEEECC
Confidence 34699999999999999999999 96 89999875
No 396
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=83.70 E-value=1 Score=40.63 Aligned_cols=33 Identities=24% Similarity=0.396 Sum_probs=30.3
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEecc
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQS 139 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~ 139 (352)
...|.|||+|..|..+|..|... |.+|+++++.
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~-G~~V~~~d~~ 189 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAAL-GANVKVGARS 189 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHT-TCEEEEEESS
T ss_pred CCEEEEEcccHHHHHHHHHHHHC-CCEEEEEECC
Confidence 45799999999999999999999 9999999976
No 397
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=83.61 E-value=0.91 Score=40.88 Aligned_cols=34 Identities=15% Similarity=0.241 Sum_probs=31.2
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVS 141 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~ 141 (352)
..|.|||.|.-|...|..|++. |++|+++++.+.
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~-G~~V~~~dr~~~ 49 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEW-PGGVTVYDIRIE 49 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTS-TTCEEEECSSTT
T ss_pred CeEEEECcCHHHHHHHHHHHHC-CCeEEEEeCCHH
Confidence 4799999999999999999999 999999998753
No 398
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=83.54 E-value=1.1 Score=41.02 Aligned_cols=33 Identities=15% Similarity=0.402 Sum_probs=29.7
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCC-cEEEEecc
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNV-QVAIIEQS 139 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~-kV~viEk~ 139 (352)
...++|+|+|.+|.+++..|++. |. +|+|+.|.
T Consensus 148 gk~~lVlGAGGaaraia~~L~~~-G~~~v~v~nRt 181 (312)
T 3t4e_A 148 GKTMVLLGAGGAATAIGAQAAIE-GIKEIKLFNRK 181 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHHc-CCCEEEEEECC
Confidence 34799999999999999999999 98 79999886
No 399
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=83.47 E-value=1 Score=40.88 Aligned_cols=33 Identities=18% Similarity=0.504 Sum_probs=28.9
Q ss_pred cEEEECCcHHHHHHHHHHhcC-CCCcEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKN-PNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~-~G~kV~viEk~~ 140 (352)
.|.|||+|..|...|..|++. .|.+|+++|+..
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 489999999999999999984 178999999864
No 400
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=83.46 E-value=1.2 Score=41.53 Aligned_cols=34 Identities=21% Similarity=0.357 Sum_probs=30.7
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVS 141 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~ 141 (352)
..|+|||+|..|...+..+.+. |++|++++..+.
T Consensus 13 ~~IlIlG~G~lg~~la~aa~~l-G~~viv~d~~~~ 46 (377)
T 3orq_A 13 ATIGIIGGGQLGKMMAQSAQKM-GYKVVVLDPSED 46 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEECCCC
Confidence 4699999999999999999999 999999997643
No 401
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=83.43 E-value=1.1 Score=40.50 Aligned_cols=33 Identities=21% Similarity=0.227 Sum_probs=30.4
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
..|.|||.|.-|...|..|++. |++|+++++..
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~-G~~V~~~dr~~ 40 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRA-GLSTWGADLNP 40 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCeEEEEECCH
Confidence 3699999999999999999999 99999999864
No 402
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=83.39 E-value=0.75 Score=43.97 Aligned_cols=32 Identities=25% Similarity=0.367 Sum_probs=29.5
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.|.|||+|..|+..|..|++. |.+|+++++..
T Consensus 2 kI~VIG~G~vG~~~A~~la~~-G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSAR-GHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 488999999999999999999 99999999853
No 403
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=83.39 E-value=0.72 Score=45.75 Aligned_cols=45 Identities=24% Similarity=0.358 Sum_probs=35.9
Q ss_pred cccCceeEecchhhhhcCCCCCCc-chhhhhhchHHHHHHHHHHcC
Q 039605 278 EIVPGMIVAGMEVAEIDGAPRMGP-TFGAMMISGQKAAHLALKSLG 322 (352)
Q Consensus 278 ~~~pg~~~aG~~~~~~~g~~r~g~-~~~~~~~sG~~aA~~i~~~l~ 322 (352)
+.+||+|++|.+...++|.+|.+. ..+.++-.|++|++.|.++.+
T Consensus 525 ~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~vfGr~Ag~~aa~~~~ 570 (572)
T 1d4d_A 525 KPITGLYAAGEVTGGVHGANRLGGNAISDIVTYGRIAGASAAKFAK 570 (572)
T ss_dssp SEEEEEEECSTTEESTTTTSCCTTHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cccCCeeECeecccCCCCCCCCchHhHHHHHHHHHHHHHHHHHHhh
Confidence 789999999999877888878743 344456789999999988764
No 404
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=83.37 E-value=0.8 Score=41.67 Aligned_cols=30 Identities=27% Similarity=0.371 Sum_probs=28.5
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEec
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQ 138 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk 138 (352)
.|.|||+|..|...|..|++. |.+|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~-g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDN-GNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHH-CCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhC-CCeEEEEEc
Confidence 488999999999999999999 999999998
No 405
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=83.37 E-value=1.2 Score=38.19 Aligned_cols=33 Identities=21% Similarity=0.259 Sum_probs=30.2
Q ss_pred ccEEEECC-cHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 107 TDVVVVGA-GSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 107 ~DVvIIGg-G~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
..|+|.|| |..|...+..|.++ |++|+++.|..
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~~-G~~V~~~~R~~ 55 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKNK-GHEPVAMVRNE 55 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSG
T ss_pred CeEEEECCCChHHHHHHHHHHhC-CCeEEEEECCh
Confidence 36999998 99999999999999 99999999864
No 406
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=83.31 E-value=0.92 Score=41.36 Aligned_cols=33 Identities=18% Similarity=0.401 Sum_probs=30.5
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
..|.|||.|..|...|..|++. |++|+++++..
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~-G~~V~~~dr~~ 64 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEA-GYALQVWNRTP 64 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHhC-CCeEEEEcCCH
Confidence 3799999999999999999999 99999999864
No 407
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=83.28 E-value=1.1 Score=40.08 Aligned_cols=33 Identities=18% Similarity=0.315 Sum_probs=29.3
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCC-cEEEEecc
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNV-QVAIIEQS 139 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~-kV~viEk~ 139 (352)
...++|+|+|.+|.+++..|++. |. +|+|+.|.
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~-G~~~v~i~~R~ 153 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQA-GPSELVIANRD 153 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHT-CCSEEEEECSC
T ss_pred CCEEEEECccHHHHHHHHHHHHc-CCCEEEEEeCC
Confidence 34699999999999999999999 96 89999875
No 408
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=83.21 E-value=1.1 Score=44.23 Aligned_cols=34 Identities=21% Similarity=0.389 Sum_probs=31.8
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVS 141 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~ 141 (352)
-.++|||+|..|...|..|.+. |.+|++||+++.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~-g~~v~vid~d~~ 382 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRK-PVPFILIDRQES 382 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TCCEEEEESSCC
T ss_pred CCEEEECCCHHHHHHHHHHHHC-CCCEEEEECChH
Confidence 4799999999999999999999 999999998865
No 409
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=83.20 E-value=0.83 Score=41.52 Aligned_cols=32 Identities=16% Similarity=0.257 Sum_probs=29.8
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCC-cEEEEecc
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNV-QVAIIEQS 139 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~-kV~viEk~ 139 (352)
..|.|||.|.-|...|..|++. |+ +|+++++.
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~-G~~~V~~~dr~ 57 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQA-GAIDMAAYDAA 57 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-SCCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHC-CCCeEEEEcCC
Confidence 3699999999999999999999 99 99999985
No 410
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=83.09 E-value=0.87 Score=41.60 Aligned_cols=32 Identities=22% Similarity=0.451 Sum_probs=29.1
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCC--cEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNV--QVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~--kV~viEk~~ 140 (352)
.|.|||+|..|...|..|++. |+ +|+++|+..
T Consensus 2 kI~VIGaG~~G~~la~~l~~~-g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMK-GFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCeEEEEeCCh
Confidence 489999999999999999998 88 999999763
No 411
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=83.09 E-value=0.9 Score=41.09 Aligned_cols=34 Identities=18% Similarity=0.358 Sum_probs=30.3
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCC-cEEEEeccC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNV-QVAIIEQSV 140 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~-kV~viEk~~ 140 (352)
...|+|||+|..|..+|..|++. |. +++|+|...
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~a-GVG~i~lvD~D~ 70 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRC-GIGKLLLFDYDK 70 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCB
T ss_pred CCeEEEECcCHHHHHHHHHHHHc-CCCEEEEECCCc
Confidence 45899999999999999999999 85 789999764
No 412
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=83.05 E-value=0.9 Score=44.26 Aligned_cols=34 Identities=24% Similarity=0.475 Sum_probs=30.7
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.-.|+|||.|..|..+|..|... |.+|+++|+.+
T Consensus 274 GktV~IiG~G~IG~~~A~~lka~-Ga~Viv~d~~~ 307 (494)
T 3ce6_A 274 GKKVLICGYGDVGKGCAEAMKGQ-GARVSVTEIDP 307 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred cCEEEEEccCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 44799999999999999999988 99999999764
No 413
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=82.96 E-value=1.3 Score=37.21 Aligned_cols=32 Identities=25% Similarity=0.371 Sum_probs=29.2
Q ss_pred cEEEECC-cHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGA-GSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGg-G~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.|+|+|| |..|...+..|.++ |++|.++.|..
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNR-GHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhC-CCEEEEEEcCc
Confidence 3899995 99999999999999 99999999864
No 414
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=82.85 E-value=1 Score=41.19 Aligned_cols=34 Identities=18% Similarity=0.127 Sum_probs=29.0
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
-.|+|+|+|+.|+.++..|+...|.+|+.++..+
T Consensus 165 ~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~ 198 (348)
T 4eez_A 165 DWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQ 198 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCH
T ss_pred CEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcH
Confidence 3699999999999999988875489999998753
No 415
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=82.64 E-value=0.96 Score=40.67 Aligned_cols=33 Identities=18% Similarity=0.334 Sum_probs=29.7
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCC-cEEEEecc
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNV-QVAIIEQS 139 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~-kV~viEk~ 139 (352)
...++|+|+|.+|.++++.|.+. |. +|+|+.|.
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~-G~~~v~v~nRt 155 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDN-FAKDIYVVTRN 155 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHT-TCSEEEEEESC
T ss_pred CCEEEEECCcHHHHHHHHHHHHc-CCCEEEEEeCC
Confidence 45799999999999999999999 98 89999876
No 416
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=82.62 E-value=1.1 Score=37.88 Aligned_cols=32 Identities=22% Similarity=0.358 Sum_probs=29.6
Q ss_pred cEEEECC-cHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGA-GSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGg-G~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.|+|.|| |..|...+..|.++ |.+|.++.|..
T Consensus 6 ~ilItGatG~iG~~l~~~L~~~-g~~V~~~~r~~ 38 (227)
T 3dhn_A 6 KIVLIGASGFVGSALLNEALNR-GFEVTAVVRHP 38 (227)
T ss_dssp EEEEETCCHHHHHHHHHHHHTT-TCEEEEECSCG
T ss_pred EEEEEcCCchHHHHHHHHHHHC-CCEEEEEEcCc
Confidence 5999995 99999999999999 99999999874
No 417
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=82.56 E-value=1.5 Score=39.58 Aligned_cols=33 Identities=36% Similarity=0.413 Sum_probs=30.5
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
..|.|||.|.-|...|..|++. |++|+++++..
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~-G~~V~~~dr~~ 42 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQ-GKRVAIWNRSP 42 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSH
T ss_pred CeEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 4799999999999999999999 99999999864
No 418
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=82.36 E-value=1.3 Score=43.11 Aligned_cols=35 Identities=11% Similarity=0.219 Sum_probs=31.8
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
+...|.|||.|.-|...|..|++. |++|.++++..
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~-G~~V~v~dr~~ 43 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADH-GFTVCAYNRTQ 43 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHT-TCCEEEECSSS
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 356899999999999999999999 99999999864
No 419
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=82.32 E-value=1.6 Score=38.61 Aligned_cols=32 Identities=22% Similarity=0.450 Sum_probs=30.0
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.|+|.|+|..|...+..|.++ |.+|+++.+..
T Consensus 5 ~ilVtGaG~iG~~l~~~L~~~-g~~V~~~~r~~ 36 (286)
T 3gpi_A 5 KILIAGCGDLGLELARRLTAQ-GHEVTGLRRSA 36 (286)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEEECTT
T ss_pred cEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCc
Confidence 599999999999999999999 99999999874
No 420
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=82.29 E-value=1.1 Score=43.49 Aligned_cols=32 Identities=28% Similarity=0.394 Sum_probs=30.0
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.|.|||+|.-|...|..|++. |++|+++|++.
T Consensus 7 kVgVIGaG~MG~~IA~~la~a-G~~V~l~D~~~ 38 (483)
T 3mog_A 7 TVAVIGSGTMGAGIAEVAASH-GHQVLLYDISA 38 (483)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHHC-CCeEEEEECCH
Confidence 699999999999999999999 99999999864
No 421
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=82.27 E-value=1.4 Score=36.53 Aligned_cols=32 Identities=19% Similarity=0.445 Sum_probs=29.6
Q ss_pred cEEEECC-cHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGA-GSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGg-G~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.|+|+|| |..|...+..|.++ |.+|.++.+..
T Consensus 5 ~ilVtGatG~iG~~l~~~l~~~-g~~V~~~~r~~ 37 (206)
T 1hdo_A 5 KIAIFGATGQTGLTTLAQAVQA-GYEVTVLVRDS 37 (206)
T ss_dssp EEEEESTTSHHHHHHHHHHHHT-TCEEEEEESCG
T ss_pred EEEEEcCCcHHHHHHHHHHHHC-CCeEEEEEeCh
Confidence 5999998 99999999999999 99999999864
No 422
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=82.24 E-value=0.66 Score=45.92 Aligned_cols=49 Identities=24% Similarity=0.418 Sum_probs=36.9
Q ss_pred cccccccCceeEecchhhhhcCCCCCCc-chhhhhhchHHHHHHHHHHcC
Q 039605 274 KLTREIVPGMIVAGMEVAEIDGAPRMGP-TFGAMMISGQKAAHLALKSLG 322 (352)
Q Consensus 274 ~~~~~~~pg~~~aG~~~~~~~g~~r~g~-~~~~~~~sG~~aA~~i~~~l~ 322 (352)
....+.+||+|++|.+...++|.+|.+. ..+.++-.|++|++.+.++.+
T Consensus 520 ~~~g~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~~fGr~Ag~~aa~~~~ 569 (571)
T 1y0p_A 520 NAKKQVIPGLYGAGEVTGGVHGANRLGGNAISDIITFGRLAGEEAAKYSK 569 (571)
T ss_dssp CTTSCEEEEEEECSTTEESSSTTSCCTTHHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCCCCcCCcEeceEcCCCCcCCCCCchHhHHHHHHHHHHHHHHHHHHhh
Confidence 3344789999999999888888877643 334456789999999988764
No 423
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=82.19 E-value=1 Score=40.16 Aligned_cols=32 Identities=25% Similarity=0.514 Sum_probs=29.3
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEecc
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQS 139 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~ 139 (352)
..++|||+|..|.+.|..|.+. |.+|+++++.
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~-g~~V~v~~r~ 161 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKE-GAKVFLWNRT 161 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH-TCEEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHc-CCEEEEEECC
Confidence 4699999999999999999999 8899999876
No 424
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=82.16 E-value=1.4 Score=42.18 Aligned_cols=31 Identities=26% Similarity=0.547 Sum_probs=28.9
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCC---cEEEEe
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNV---QVAIIE 137 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~---kV~viE 137 (352)
+..++|+|+|.+|.+++..|.+. |. +|.|++
T Consensus 186 ~~rvlvlGAGgAg~aia~~L~~~-G~~~~~I~vvd 219 (439)
T 2dvm_A 186 EITLALFGAGAAGFATLRILTEA-GVKPENVRVVE 219 (439)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHT-TCCGGGEEEEE
T ss_pred CCEEEEECccHHHHHHHHHHHHc-CCCcCeEEEEE
Confidence 45799999999999999999999 98 899999
No 425
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=82.00 E-value=0.87 Score=42.21 Aligned_cols=32 Identities=28% Similarity=0.379 Sum_probs=29.7
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.|.|||+|.-|...|..|++. |++|.++++..
T Consensus 17 kI~iIG~G~mG~~la~~L~~~-G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKK-CREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTT-EEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 699999999999999999999 99999998753
No 426
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=81.97 E-value=1.2 Score=40.90 Aligned_cols=32 Identities=25% Similarity=0.571 Sum_probs=28.8
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCC--cEEEEecc
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNV--QVAIIEQS 139 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~--kV~viEk~ 139 (352)
..|.|||+|..|.+.|+.|++. |+ .+.++|..
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~-~~~~~l~l~D~~ 39 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQ-GITDELVVIDVN 39 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCceEEEEecc
Confidence 3699999999999999999998 77 89999974
No 427
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=81.95 E-value=1.4 Score=37.16 Aligned_cols=32 Identities=25% Similarity=0.393 Sum_probs=29.3
Q ss_pred cEEEECC-cHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGA-GSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGg-G~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.|+|.|| |..|...+..|.++ |.+|.++.|..
T Consensus 2 kilVtGatG~iG~~l~~~L~~~-g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRR-GHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHC-CCEEEEEEecc
Confidence 3899998 99999999999999 99999999863
No 428
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=81.84 E-value=1.3 Score=39.18 Aligned_cols=32 Identities=22% Similarity=0.269 Sum_probs=29.2
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.|.|||+|..|...|..|.+. |++|.++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRR-GHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 488999999999999999999 99999998763
No 429
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=81.80 E-value=0.98 Score=45.13 Aligned_cols=53 Identities=17% Similarity=0.241 Sum_probs=39.4
Q ss_pred cceeecccccccCceeEecchh-hhhcCCCCCCcch-hhhhhchHHHHHHHHHHc
Q 039605 269 EDAIVKLTREIVPGMIVAGMEV-AEIDGAPRMGPTF-GAMMISGQKAAHLALKSL 321 (352)
Q Consensus 269 ~~~vv~~~~~~~pg~~~aG~~~-~~~~g~~r~g~~~-~~~~~sG~~aA~~i~~~l 321 (352)
...+..+.++.+||+|++|.++ ..++|.+|.+... ..++-.|+.|++.|.+++
T Consensus 361 Gi~vd~~~~~~IpGLyAaGe~a~~g~hGanrl~gnsl~~~~vfGr~Ag~~aa~~~ 415 (602)
T 1kf6_A 361 GIETDQNCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQATERA 415 (602)
T ss_dssp EEECCTTSBCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEECCCCccccCCEEEccccccccccCCCCCccHHHHHHHHHHHHHHHHHHHhh
Confidence 3344556667899999999997 4678888875432 334566999999999887
No 430
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=81.79 E-value=1.7 Score=39.21 Aligned_cols=33 Identities=15% Similarity=0.242 Sum_probs=30.2
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
..|.|||+|..|...|..|++. |.+|.++++..
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~-g~~V~~~~~~~ 63 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKM-GHTVTVWNRTA 63 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-TCCEEEECSSG
T ss_pred CeEEEEcccHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 3699999999999999999999 99999999864
No 431
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=81.72 E-value=1.4 Score=38.85 Aligned_cols=32 Identities=6% Similarity=0.108 Sum_probs=30.0
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.|+|.|+|..|...+..|.++ |++|.++.+..
T Consensus 7 ~ilVtGaG~iG~~l~~~L~~~-g~~V~~~~r~~ 38 (286)
T 3ius_A 7 TLLSFGHGYTARVLSRALAPQ-GWRIIGTSRNP 38 (286)
T ss_dssp EEEEETCCHHHHHHHHHHGGG-TCEEEEEESCG
T ss_pred cEEEECCcHHHHHHHHHHHHC-CCEEEEEEcCh
Confidence 599999999999999999999 99999999864
No 432
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=81.72 E-value=4.5 Score=38.00 Aligned_cols=85 Identities=16% Similarity=0.143 Sum_probs=52.7
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCC-----cceeecchHHHHHHHcC--CccccCCCeEEEechH
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGA-----SGSVVRKPAHLFLDELG--IDYDEQDNYVVIKHAA 178 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~-----~~~~~~~~~~~~l~~~G--i~~~~~~~~~~~~~~~ 178 (352)
...++|+|+|..+...|..++.. |++|+|+|..+..-.. .......+..+.+..+. -..+....+....|..
T Consensus 204 ~~rL~IfGAGhva~ala~~a~~l-g~~V~v~D~R~~~~~~~~fp~a~~~~~~~p~~~~~~~~~~~~~~~~t~vvvlTh~~ 282 (386)
T 2we8_A 204 RPRMLVFGAIDFAAAVAQQGAFL-GYRVTVCDARPVFATTARFPTADEVVVDWPHRYLAAQAEAGAIDARTVVCVLTHDP 282 (386)
T ss_dssp CCEEEEECCSTHHHHHHHHHHHT-TCEEEEEESCTTTSCTTTCSSSSEEEESCHHHHHHHHHHHTCCCTTCEEEECCCCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEEEECCchhhcccccCCCceEEEeCChHHHHHhhccccCCCCCcEEEEEECCh
Confidence 45799999999999999999999 9999999976542211 11122222344454433 0022222344455666
Q ss_pred HHHHHHHHHHHcC
Q 039605 179 LFTSTIMSKLLAR 191 (352)
Q Consensus 179 ~~~~~L~~~~~~~ 191 (352)
.+...+++.+.+.
T Consensus 283 ~~D~~~L~~aL~~ 295 (386)
T 2we8_A 283 KFDVPLLEVALRL 295 (386)
T ss_dssp HHHHHHHHHHTTS
T ss_pred HhHHHHHHHHhcC
Confidence 6766667777643
No 433
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=81.71 E-value=1.4 Score=39.62 Aligned_cols=32 Identities=22% Similarity=0.369 Sum_probs=29.8
Q ss_pred cEEEEC-CcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVG-AGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIG-gG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.|.||| .|.-|.+.|..|++. |++|.++++..
T Consensus 23 ~I~iIGg~G~mG~~la~~l~~~-G~~V~~~~~~~ 55 (298)
T 2pv7_A 23 KIVIVGGYGKLGGLFARYLRAS-GYPISILDRED 55 (298)
T ss_dssp CEEEETTTSHHHHHHHHHHHTT-TCCEEEECTTC
T ss_pred EEEEEcCCCHHHHHHHHHHHhC-CCeEEEEECCc
Confidence 699999 999999999999999 99999999764
No 434
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=81.64 E-value=1.3 Score=41.40 Aligned_cols=33 Identities=12% Similarity=0.270 Sum_probs=30.0
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEecc
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQS 139 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~ 139 (352)
...|+|+|.|..|..+|..|.+. |.+|++.|+.
T Consensus 173 GktV~V~G~G~VG~~~A~~L~~~-GakVvv~D~~ 205 (364)
T 1leh_A 173 GLAVSVQGLGNVAKALCKKLNTE-GAKLVVTDVN 205 (364)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSC
T ss_pred cCEEEEECchHHHHHHHHHHHHC-CCEEEEEcCC
Confidence 45799999999999999999999 9999998864
No 435
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=81.60 E-value=1.4 Score=41.29 Aligned_cols=33 Identities=15% Similarity=0.366 Sum_probs=30.2
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
..|+|||+|..|...+..+.+. |++|++++..+
T Consensus 15 k~IlIlG~G~~g~~la~aa~~~-G~~vi~~d~~~ 47 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKEM-GYKIAVLDPTK 47 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCEEEEEESST
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCEEEEEeCCC
Confidence 4699999999999999999999 99999999754
No 436
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=81.58 E-value=1.1 Score=44.13 Aligned_cols=53 Identities=21% Similarity=0.245 Sum_probs=38.9
Q ss_pred eeecccccccCceeEecchh-hhhcCCCCCCc-chhhhhhchHHHHHHHHHHcCC
Q 039605 271 AIVKLTREIVPGMIVAGMEV-AEIDGAPRMGP-TFGAMMISGQKAAHLALKSLGQ 323 (352)
Q Consensus 271 ~vv~~~~~~~pg~~~aG~~~-~~~~g~~r~g~-~~~~~~~sG~~aA~~i~~~l~~ 323 (352)
.+..+.++.+||+|++|.++ ..++|.+|.+. ....++..|+.|++.|.+++..
T Consensus 358 ~vd~~~~t~I~GLyAaGE~a~~g~hGanrl~gnsl~~~~vfG~~Ag~~aa~~~~~ 412 (540)
T 1chu_A 358 MVDDHGRTDVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDITRRMPY 412 (540)
T ss_dssp ECCTTCBCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHC--
T ss_pred EECCCCCCccCCEEeccccccccccCCCcCcchhHHHHHHHHHHHHHHHHHhccc
Confidence 44455668899999999998 56788888754 2334466799999999988754
No 437
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=81.53 E-value=1.2 Score=41.99 Aligned_cols=34 Identities=18% Similarity=0.312 Sum_probs=31.2
Q ss_pred CccEEEECC-cHHHHHHHHHHhcCCCC---cEEEEeccC
Q 039605 106 DTDVVVVGA-GSAGLSCAYEISKNPNV---QVAIIEQSV 140 (352)
Q Consensus 106 ~~DVvIIGg-G~aGl~aA~~la~~~G~---kV~viEk~~ 140 (352)
...|+|||+ |.+|+.|+..+... |+ +|.++|.+.
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~l-Ga~~~~V~v~D~~~ 251 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKV-GIPDANILKWDIKE 251 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHT-TCCGGGEEEECHHH
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhC-CCCcCceEEeeccc
Confidence 468999999 99999999999999 98 999999875
No 438
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=81.50 E-value=0.82 Score=44.17 Aligned_cols=54 Identities=11% Similarity=0.055 Sum_probs=36.3
Q ss_pred cccceeecccccccCceeEecchhh-hhcCCCCCCcch-hhhhhchHHHHHHHHHH
Q 039605 267 TAEDAIVKLTREIVPGMIVAGMEVA-EIDGAPRMGPTF-GAMMISGQKAAHLALKS 320 (352)
Q Consensus 267 ~g~~~vv~~~~~~~pg~~~aG~~~~-~~~g~~r~g~~~-~~~~~sG~~aA~~i~~~ 320 (352)
.|.+.+.++.++.+||+|++|+++. .++|.+|++.+. ...+..|+.|+..|..+
T Consensus 316 ~GGI~vd~~~~t~ipgLyAaGd~a~~~~hg~~rl~~~sl~~~~v~G~~a~~~~a~~ 371 (472)
T 2e5v_A 316 DGGIRVNIRGESNIVNLYAIGEVSDSGLHGANRLASNSLLEGLVFGINLPRYVDSS 371 (472)
T ss_dssp SCEEECCTTCBCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHGGGTTTSC
T ss_pred CCCeEECCCCccccCCEEecchhcccccCCCCCCCcccHHHHHHHHHHHHHHHHhh
Confidence 3555667788899999999999987 677877765432 22233456665555443
No 439
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=81.50 E-value=0.89 Score=40.62 Aligned_cols=32 Identities=16% Similarity=0.233 Sum_probs=30.0
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.|.|||.|.-|...|..|++. |++|+++++.+
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~-G~~V~~~dr~~ 34 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRA-GFDVTVWNRNP 34 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHH-TCCEEEECSSG
T ss_pred eEEEEccCHHHHHHHHHHHHC-CCeEEEEcCCH
Confidence 589999999999999999999 99999999875
No 440
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=81.37 E-value=1.1 Score=40.65 Aligned_cols=32 Identities=16% Similarity=0.320 Sum_probs=29.0
Q ss_pred cEEEECCcHHHHHHHHHHhcCCC--CcEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPN--VQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G--~kV~viEk~~ 140 (352)
.|.|||+|..|...|..|++. | .+|+++|+..
T Consensus 3 kI~VIGaG~~G~~la~~L~~~-g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQ-GVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCEEEEEcCCH
Confidence 589999999999999999998 8 6899999863
No 441
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=81.32 E-value=1.7 Score=38.67 Aligned_cols=32 Identities=28% Similarity=0.418 Sum_probs=29.7
Q ss_pred cEEEECC-cHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGA-GSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGg-G~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.|.|||+ |..|...|..|.+. |++|+++++..
T Consensus 13 ~I~iIG~tG~mG~~la~~l~~~-g~~V~~~~r~~ 45 (286)
T 3c24_A 13 TVAILGAGGKMGARITRKIHDS-AHHLAAIEIAP 45 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHHHS-SSEEEEECCSH
T ss_pred EEEEECCCCHHHHHHHHHHHhC-CCEEEEEECCH
Confidence 6999999 99999999999999 99999999763
No 442
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=81.22 E-value=1.5 Score=42.56 Aligned_cols=34 Identities=26% Similarity=0.352 Sum_probs=31.1
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
+.+|.|||.|.-|...|..|++. |++|.++++..
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~-G~~V~v~~r~~ 48 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESR-GYTVSIFNRSR 48 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTT-TCCEEEECSSH
T ss_pred CCeEEEEccHHHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 45899999999999999999999 99999999863
No 443
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=81.20 E-value=1.3 Score=40.66 Aligned_cols=32 Identities=28% Similarity=0.591 Sum_probs=28.8
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCC--cEEEEecc
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNV--QVAIIEQS 139 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~--kV~viEk~ 139 (352)
..|.|||+|..|.++|+.|+.. |+ .+.++|..
T Consensus 10 ~kV~ViGaG~vG~~~a~~l~~~-~~~~el~l~D~~ 43 (326)
T 3vku_A 10 QKVILVGDGAVGSSYAYAMVLQ-GIAQEIGIVDIF 43 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCCeEEEEeCC
Confidence 4699999999999999999988 77 89999974
No 444
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=81.12 E-value=1.2 Score=40.55 Aligned_cols=33 Identities=27% Similarity=0.674 Sum_probs=29.3
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCC--cEEEEeccC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNV--QVAIIEQSV 140 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~--kV~viEk~~ 140 (352)
..|.|||+|..|...|+.++.. |+ .+.|+|...
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~-g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAK-GIADRLVLLDLSE 49 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCCSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhc-CCCCEEEEEcCCc
Confidence 3699999999999999999988 88 999999865
No 445
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=80.96 E-value=1.3 Score=42.50 Aligned_cols=33 Identities=18% Similarity=0.198 Sum_probs=30.4
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
..+.|||.|-.||..|..+++. |++|+.+|-+.
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~-G~~V~g~Did~ 54 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALL-GHRVVGYDVNP 54 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCEEEEECSCH
T ss_pred CEEEEEccCHHHHHHHHHHHhC-CCcEEEEECCH
Confidence 4799999999999999999999 99999999753
No 446
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=80.91 E-value=1.5 Score=38.56 Aligned_cols=31 Identities=26% Similarity=0.541 Sum_probs=29.0
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEecc
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQS 139 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~ 139 (352)
.++|||+|..|...|..|.+. |.+|+++++.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~-g~~v~v~~r~ 148 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREA-GLEVWVWNRT 148 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECSS
T ss_pred eEEEECCcHHHHHHHHHHHHC-CCEEEEEECC
Confidence 799999999999999999999 8899999875
No 447
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=80.88 E-value=1.2 Score=40.31 Aligned_cols=32 Identities=25% Similarity=0.389 Sum_probs=28.8
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCC--cEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNV--QVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~--kV~viEk~~ 140 (352)
.|.|||+|..|.+.|+.|++. |+ ++.++|...
T Consensus 2 kI~ViGaG~vG~~la~~l~~~-~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLN-LDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-SCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCeEEEEECCh
Confidence 489999999999999999998 87 899999763
No 448
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=80.83 E-value=1.2 Score=39.14 Aligned_cols=32 Identities=25% Similarity=0.243 Sum_probs=28.8
Q ss_pred cEEEECC-c-HHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGA-G-SAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGg-G-~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
-++|.|| | -.|...|.+|+++ |++|++++++.
T Consensus 24 ~vlITGasg~GIG~~~a~~l~~~-G~~V~~~~r~~ 57 (266)
T 3o38_A 24 VVLVTAAAGTGIGSTTARRALLE-GADVVISDYHE 57 (266)
T ss_dssp EEEESSCSSSSHHHHHHHHHHHT-TCEEEEEESCH
T ss_pred EEEEECCCCCchHHHHHHHHHHC-CCEEEEecCCH
Confidence 5899998 7 5999999999999 99999998763
No 449
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=80.69 E-value=2.1 Score=40.95 Aligned_cols=56 Identities=14% Similarity=0.082 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHcC-------CCcEEEccceeEEEEEeCCEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCCC
Q 039605 179 LFTSTIMSKLLAR-------PNVKLFNAVAAEDLIVKGNRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGHD 249 (352)
Q Consensus 179 ~~~~~L~~~~~~~-------~gv~i~~~t~v~~l~~~~g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~~ 249 (352)
.+.+.|.+.+... .+.+++++++|+++..+++++. |.+.+ ..+++||+||+|++..
T Consensus 207 ~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~v~-v~~~~--------------g~~~~ad~vI~a~~~~ 269 (472)
T 1b37_A 207 AVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGGVT-VKTED--------------NSVYSADYVMVSASLG 269 (472)
T ss_dssp HHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSCEE-EEETT--------------SCEEEESEEEECSCHH
T ss_pred HHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCcEE-EEECC--------------CCEEEcCEEEEecCHH
Confidence 4455555554322 2678999999999998877765 65543 2579999999999953
No 450
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=80.51 E-value=1.5 Score=42.71 Aligned_cols=32 Identities=22% Similarity=0.341 Sum_probs=28.9
Q ss_pred cEEEECCcHHHHH-HHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGAGSAGLS-CAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~-aA~~la~~~G~kV~viEk~~ 140 (352)
.|.|||-|.+|++ +|..|.++ |++|.+.|...
T Consensus 24 ~v~viGiG~sG~s~~A~~l~~~-G~~V~~~D~~~ 56 (494)
T 4hv4_A 24 HIHFVGIGGAGMGGIAEVLANE-GYQISGSDLAP 56 (494)
T ss_dssp EEEEETTTSTTHHHHHHHHHHT-TCEEEEECSSC
T ss_pred EEEEEEEcHhhHHHHHHHHHhC-CCeEEEEECCC
Confidence 6999999999997 69999999 99999999753
No 451
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=80.47 E-value=1.2 Score=40.04 Aligned_cols=32 Identities=16% Similarity=0.316 Sum_probs=29.8
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.|.|||.|..|...|..|++. |++|+++++..
T Consensus 5 ~I~iiG~G~mG~~~a~~l~~~-G~~V~~~d~~~ 36 (302)
T 2h78_A 5 QIAFIGLGHMGAPMATNLLKA-GYLLNVFDLVQ 36 (302)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-TCEEEEECSSH
T ss_pred EEEEEeecHHHHHHHHHHHhC-CCeEEEEcCCH
Confidence 599999999999999999999 99999999864
No 452
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=80.43 E-value=1.2 Score=42.18 Aligned_cols=34 Identities=32% Similarity=0.510 Sum_probs=30.0
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCC-cEEEEeccC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNV-QVAIIEQSV 140 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~-kV~viEk~~ 140 (352)
...|+|||+|..|..++..|... |. +|+++++..
T Consensus 167 g~~VlIiGaG~iG~~~a~~l~~~-G~~~V~v~~r~~ 201 (404)
T 1gpj_A 167 DKTVLVVGAGEMGKTVAKSLVDR-GVRAVLVANRTY 201 (404)
T ss_dssp TCEEEEESCCHHHHHHHHHHHHH-CCSEEEEECSSH
T ss_pred CCEEEEEChHHHHHHHHHHHHHC-CCCEEEEEeCCH
Confidence 34699999999999999999988 98 899998763
No 453
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=80.38 E-value=1.9 Score=40.97 Aligned_cols=34 Identities=18% Similarity=0.301 Sum_probs=30.3
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
...|+|+|+|..|...+..+.+. |++|++++..+
T Consensus 35 ~~~IlIlG~G~lg~~~~~aa~~l-G~~v~v~d~~~ 68 (419)
T 4e4t_A 35 GAWLGMVGGGQLGRMFCFAAQSM-GYRVAVLDPDP 68 (419)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHC-CCEEEEECCCC
Confidence 34799999999999999999999 99999998653
No 454
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=80.33 E-value=1.6 Score=40.05 Aligned_cols=34 Identities=21% Similarity=0.223 Sum_probs=29.0
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.-.|+|+|+|..|+.++..+... |.+|+++++.+
T Consensus 177 g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~ 210 (348)
T 3two_A 177 GTKVGVAGFGGLGSMAVKYAVAM-GAEVSVFARNE 210 (348)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHT-TCEEEEECSSS
T ss_pred CCEEEEECCcHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 34699999999999988877778 99999998764
No 455
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=80.23 E-value=3.8 Score=41.28 Aligned_cols=57 Identities=5% Similarity=-0.007 Sum_probs=43.6
Q ss_pred hHHHHHHHHHHHHcCCCcEEEccceeEEEEEeC--CEEEEEEEcccceeccCCCCCCCCCeEEEeCEEEEccCC
Q 039605 177 AALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG--NRVGGIVTNWALVSMNHDSQSCMDPNVMEAKVVVSSCGH 248 (352)
Q Consensus 177 ~~~~~~~L~~~~~~~~gv~i~~~t~v~~l~~~~--g~v~gv~~~~g~~~~~~~~~~~g~~~~i~A~~VIlAtG~ 248 (352)
...+.+.|.+.+. ..|.++++++.|.+|..++ ++++|+...+| .+++|+.||.....
T Consensus 377 ~g~L~qaL~r~~~-~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~G--------------e~i~A~~VVs~~~~ 435 (650)
T 1vg0_A 377 QGELPQCFCRMCA-VFGGIYCLRHSVQCLVVDKESRKCKAVIDQFG--------------QRIISKHFIIEDSY 435 (650)
T ss_dssp TTHHHHHHHHHHH-HTTCEEESSCCEEEEEEETTTCCEEEEEETTS--------------CEEECSEEEEEGGG
T ss_pred hhHHHHHHHHHHH-HcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCC--------------CEEEcCEEEEChhh
Confidence 3456666666555 6799999999999999987 88988875432 57999998885553
No 456
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=80.17 E-value=1.3 Score=41.08 Aligned_cols=34 Identities=18% Similarity=0.497 Sum_probs=30.3
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCC-cEEEEeccC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNV-QVAIIEQSV 140 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~-kV~viEk~~ 140 (352)
...|+|||+|..|..+|..|++. |. +++|+|...
T Consensus 118 ~~~VlvvG~GglGs~va~~La~a-Gvg~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATS-GIGEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH-TCSEEEEEECCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhC-CCCeEEEECCCc
Confidence 45799999999999999999999 86 699999764
No 457
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=80.06 E-value=1.6 Score=38.67 Aligned_cols=32 Identities=22% Similarity=0.331 Sum_probs=29.0
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCC--cEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNV--QVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~--kV~viEk~~ 140 (352)
.|.|||+|..|...|..|++. |. +|+++++..
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~-g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRS-GFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-TCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhc-CCCcEEEEEeCCH
Confidence 489999999999999999998 88 899998763
No 458
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=80.05 E-value=1.5 Score=40.20 Aligned_cols=33 Identities=27% Similarity=0.577 Sum_probs=28.8
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCC--cEEEEecc
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNV--QVAIIEQS 139 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~--kV~viEk~ 139 (352)
...|.|||+|..|.+.|+.|+.. ++ .+.|+|..
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~-~~~~el~L~Di~ 43 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQ-GIAQEIGIVDIF 43 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHcC-CCCCEEEEEeCC
Confidence 45799999999999999999987 65 79999974
No 459
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=80.04 E-value=1.3 Score=39.53 Aligned_cols=32 Identities=16% Similarity=0.338 Sum_probs=29.1
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCC-cEEEEecc
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNV-QVAIIEQS 139 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~-kV~viEk~ 139 (352)
..++|||+|.+|.++++.|.+. |. +|.|+.|.
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~-G~~~i~v~nRt 152 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNS-GFEKLKIYARN 152 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHT-TCCCEEEECSC
T ss_pred CEEEEECCcHHHHHHHHHHHHC-CCCEEEEEeCC
Confidence 4799999999999999999999 86 79999876
No 460
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=80.03 E-value=1.3 Score=40.61 Aligned_cols=33 Identities=12% Similarity=0.219 Sum_probs=29.8
Q ss_pred CccEEEECCc-HHHHHHHHHHhcCCCCcEEEEecc
Q 039605 106 DTDVVVVGAG-SAGLSCAYEISKNPNVQVAIIEQS 139 (352)
Q Consensus 106 ~~DVvIIGgG-~aGl~aA~~la~~~G~kV~viEk~ 139 (352)
...++|||+| ..|..+|..|.+. |.+|+++++.
T Consensus 177 gk~vvVIG~G~iVG~~~A~~L~~~-gAtVtv~nR~ 210 (320)
T 1edz_A 177 GKKCIVINRSEIVGRPLAALLAND-GATVYSVDVN 210 (320)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTT-SCEEEEECSS
T ss_pred CCEEEEECCCcchHHHHHHHHHHC-CCEEEEEeCc
Confidence 4589999999 6799999999999 9999999876
No 461
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=79.81 E-value=1.3 Score=42.91 Aligned_cols=34 Identities=21% Similarity=0.360 Sum_probs=31.1
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCC-cEEEEeccCC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNV-QVAIIEQSVS 141 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~-kV~viEk~~~ 141 (352)
.|.|||.|..|+..|..|++.+|+ +|+++|++..
T Consensus 20 kIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 20 KIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp EEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred EEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 699999999999999999987589 9999998865
No 462
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=79.77 E-value=1.7 Score=40.45 Aligned_cols=33 Identities=15% Similarity=0.343 Sum_probs=30.6
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
..|.|||.|.-|...|..|++. |++|+++++..
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~-G~~V~v~dr~~ 55 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKG-GHECVVYDLNV 55 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CEEEEECchHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 3799999999999999999999 99999999864
No 463
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=79.77 E-value=1.7 Score=43.24 Aligned_cols=34 Identities=21% Similarity=0.455 Sum_probs=30.4
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCC-cEEEEeccC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNV-QVAIIEQSV 140 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~-kV~viEk~~ 140 (352)
...|+|||+|..|..+|..|++. |. +++|+|...
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~a-GVG~ItLvD~D~ 361 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAW-GVRKITFVDNGT 361 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT-TCCEEEEECCSB
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCc
Confidence 46799999999999999999999 87 699998764
No 464
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=79.76 E-value=1.3 Score=41.62 Aligned_cols=29 Identities=21% Similarity=0.369 Sum_probs=27.3
Q ss_pred cEEEECCcHHHHHHHHHHhc-CCCCcEEEEe
Q 039605 108 DVVVVGAGSAGLSCAYEISK-NPNVQVAIIE 137 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~-~~G~kV~viE 137 (352)
.|.|||+|..|...|..|++ . |.+|++++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~-G~~V~~~~ 33 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRD-GVEVRVLT 33 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTST-TEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCC-CCEEEEEe
Confidence 59999999999999999987 7 99999999
No 465
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=79.69 E-value=1.4 Score=38.51 Aligned_cols=32 Identities=19% Similarity=0.333 Sum_probs=29.1
Q ss_pred cEEEECCcHHHHHHHHHHhcCCC-CcEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPN-VQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G-~kV~viEk~~ 140 (352)
.|.|||+|..|...|..|++. | .+|.++++..
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~-g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQ-GGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-CSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHC-CCCeEEEECCCH
Confidence 488999999999999999999 9 9999999863
No 466
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=79.64 E-value=1.4 Score=40.86 Aligned_cols=34 Identities=18% Similarity=0.317 Sum_probs=30.4
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCC-cEEEEeccC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNV-QVAIIEQSV 140 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~-kV~viEk~~ 140 (352)
...|+|||+|..|..+|..|++. |. +++|+|...
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~-Gvg~itlvD~d~ 70 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILA-GVKGLTMLDHEQ 70 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CCCEEEEEECCC
Confidence 56899999999999999999999 87 799998654
No 467
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=79.57 E-value=1.3 Score=42.88 Aligned_cols=32 Identities=28% Similarity=0.453 Sum_probs=28.8
Q ss_pred cEEEECCcHHHHHHHHHHhcCC-CCcEEEEecc
Q 039605 108 DVVVVGAGSAGLSCAYEISKNP-NVQVAIIEQS 139 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~-G~kV~viEk~ 139 (352)
.|.|||.|..|+..|..|++.+ |++|++++++
T Consensus 11 kI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~ 43 (481)
T 2o3j_A 11 KVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMN 43 (481)
T ss_dssp EEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 6999999999999999999872 5899999975
No 468
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=79.45 E-value=2 Score=36.96 Aligned_cols=32 Identities=13% Similarity=0.211 Sum_probs=29.0
Q ss_pred cEEEECC-cHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGA-GSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGg-G~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
-++|.|| |..|...+..|+++ |.+|+++.+..
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~~-g~~V~~~~r~~ 35 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLARA-GHTVIGIDRGQ 35 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT-TCEEEEEESSS
T ss_pred EEEEeCCCcHHHHHHHHHHHhC-CCEEEEEeCCh
Confidence 3889987 99999999999999 99999999864
No 469
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=79.36 E-value=1.7 Score=40.21 Aligned_cols=33 Identities=21% Similarity=0.251 Sum_probs=28.9
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
-.|+|+|+|..|+.++..+... |.+|+++++.+
T Consensus 189 ~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~ 221 (366)
T 1yqd_A 189 KHIGIVGLGGLGHVAVKFAKAF-GSKVTVISTSP 221 (366)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCG
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 4699999999999999888888 99999998753
No 470
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=79.33 E-value=1.7 Score=37.91 Aligned_cols=33 Identities=21% Similarity=0.220 Sum_probs=29.9
Q ss_pred cEEEECCcHHHHHHHHHHhcCCC----CcEEEEeccCC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPN----VQVAIIEQSVS 141 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G----~kV~viEk~~~ 141 (352)
.|.|||+|.-|...|..|++. | .+|.++++...
T Consensus 6 ~i~iiG~G~mG~~~a~~l~~~-g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 6 KLGFMGLGQMGSALAHGIANA-NIIKKENLFYYGPSKK 42 (262)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-TSSCGGGEEEECSSCC
T ss_pred EEEEECcCHHHHHHHHHHHHC-CCCCCCeEEEEeCCcc
Confidence 699999999999999999998 8 69999998754
No 471
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=79.29 E-value=2.2 Score=37.64 Aligned_cols=32 Identities=16% Similarity=0.113 Sum_probs=28.9
Q ss_pred cEEEECC---cHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGA---GSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGg---G~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
-++|.|| |..|...|..|+++ |++|+++.+..
T Consensus 8 ~vlVTGas~~~gIG~~~a~~l~~~-G~~V~~~~r~~ 42 (275)
T 2pd4_A 8 KGLIVGVANNKSIAYGIAQSCFNQ-GATLAFTYLNE 42 (275)
T ss_dssp EEEEECCCSTTSHHHHHHHHHHTT-TCEEEEEESST
T ss_pred EEEEECCCCCCcHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 4899997 68999999999999 99999999864
No 472
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=79.21 E-value=1.6 Score=44.62 Aligned_cols=32 Identities=25% Similarity=0.336 Sum_probs=30.1
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.|.|||+|.-|...|..+++. |++|+++|+..
T Consensus 314 kV~VIGaG~MG~~iA~~la~a-G~~V~l~D~~~ 345 (725)
T 2wtb_A 314 KVAIIGGGLMGSGIATALILS-NYPVILKEVNE 345 (725)
T ss_dssp CEEEECCSHHHHHHHHHHHTT-TCCEEEECSSH
T ss_pred EEEEEcCCHhhHHHHHHHHhC-CCEEEEEECCH
Confidence 599999999999999999999 99999999864
No 473
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=79.10 E-value=1.5 Score=41.95 Aligned_cols=34 Identities=24% Similarity=0.320 Sum_probs=30.6
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.-.|+|||.|..|..+|..|... |.+|++.|+.+
T Consensus 247 GKTVgVIG~G~IGr~vA~~lraf-Ga~Viv~d~dp 280 (464)
T 3n58_A 247 GKVAVVCGYGDVGKGSAQSLAGA-GARVKVTEVDP 280 (464)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHHC-CCEEEEEeCCc
Confidence 35799999999999999999988 99999999764
No 474
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=79.06 E-value=1.9 Score=38.68 Aligned_cols=33 Identities=21% Similarity=0.246 Sum_probs=28.9
Q ss_pred ccEEEECCc---HHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 107 TDVVVVGAG---SAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 107 ~DVvIIGgG---~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.-++|.||+ ..|...|..|+++ |++|+++.+..
T Consensus 31 k~vlVTGasg~~GIG~~ia~~la~~-G~~V~~~~r~~ 66 (296)
T 3k31_A 31 KKGVIIGVANDKSLAWGIAKAVCAQ-GAEVALTYLSE 66 (296)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHT-TCEEEEEESSG
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHC-CCEEEEEeCCh
Confidence 358999986 7899999999999 99999998863
No 475
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=79.02 E-value=1.5 Score=39.08 Aligned_cols=32 Identities=22% Similarity=0.261 Sum_probs=29.4
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.|.|||+|.-|...|..|++. |.+|.++++..
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~-g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKH-GYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHT-TCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 488999999999999999999 99999999864
No 476
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=79.01 E-value=1.5 Score=39.97 Aligned_cols=32 Identities=28% Similarity=0.549 Sum_probs=28.8
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCC--cEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNV--QVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~--kV~viEk~~ 140 (352)
.|.|||+|..|.+.|+.|++. |+ .+.++|...
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~-~~~~el~l~D~~~ 35 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQ-DVAKEVVMVDIKD 35 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCSSEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCch
Confidence 489999999999999999988 77 899999864
No 477
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=78.92 E-value=1.5 Score=40.39 Aligned_cols=32 Identities=22% Similarity=0.481 Sum_probs=29.0
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCC--cEEEEecc
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNV--QVAIIEQS 139 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~--kV~viEk~ 139 (352)
..|.|||+|..|..+|+.++.. |+ .+.++|..
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~-g~~~ev~L~Di~ 55 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMK-DLADEVALVDVM 55 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHH-CCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCCeEEEEECC
Confidence 4799999999999999999998 87 89999975
No 478
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=78.85 E-value=1.8 Score=43.15 Aligned_cols=35 Identities=20% Similarity=0.433 Sum_probs=30.8
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCC-cEEEEeccCC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNV-QVAIIEQSVS 141 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~-kV~viEk~~~ 141 (352)
...|+|||+|..|..+|..|++. |. +++|+|....
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~a-GVG~ItLvD~D~V 361 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAW-GVRKITFVDNGTV 361 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCCEEEEECCCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCCC
Confidence 46799999999999999999999 86 6899997653
No 479
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=78.82 E-value=2.2 Score=39.30 Aligned_cols=32 Identities=28% Similarity=0.686 Sum_probs=29.0
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCC--cEEEEecc
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNV--QVAIIEQS 139 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~--kV~viEk~ 139 (352)
..|.|||+|..|.+.|+.|+.. |+ .+.|+|..
T Consensus 20 ~kV~ViGaG~vG~~~a~~l~~~-~~~~el~L~Di~ 53 (331)
T 4aj2_A 20 NKITVVGVGAVGMACAISILMK-DLADELALVDVI 53 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT-TCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CCCceEEEEeCC
Confidence 4799999999999999999998 87 89999975
No 480
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=78.74 E-value=1.5 Score=39.26 Aligned_cols=32 Identities=16% Similarity=0.281 Sum_probs=29.6
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.|.|||+|..|...|..|.+. |.+|.++++..
T Consensus 7 ~i~iiG~G~~G~~~a~~l~~~-g~~V~~~~~~~ 38 (299)
T 1vpd_A 7 KVGFIGLGIMGKPMSKNLLKA-GYSLVVSDRNP 38 (299)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-TCEEEEECSCH
T ss_pred eEEEECchHHHHHHHHHHHhC-CCEEEEEeCCH
Confidence 699999999999999999999 99999998753
No 481
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=78.69 E-value=2.4 Score=37.80 Aligned_cols=32 Identities=13% Similarity=0.380 Sum_probs=29.7
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCC---cEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNV---QVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~---kV~viEk~~ 140 (352)
.|.|||+|.-|.+.|..|.+. |+ +|.+++++.
T Consensus 5 ~I~iIG~G~mG~aia~~l~~~-g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 5 NITFIGGGNMARNIVVGLIAN-GYDPNRICVTNRSL 39 (280)
T ss_dssp CEEEESCSHHHHHHHHHHHHT-TCCGGGEEEECSSS
T ss_pred EEEEEcccHHHHHHHHHHHHC-CCCCCeEEEEeCCH
Confidence 699999999999999999999 88 999999864
No 482
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=78.68 E-value=1.9 Score=40.09 Aligned_cols=33 Identities=24% Similarity=0.171 Sum_probs=28.2
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
-.|+|+|+|+.|+.++..+... |.+|+++++.+
T Consensus 196 ~~VlV~GaG~vG~~aiqlak~~-Ga~Vi~~~~~~ 228 (369)
T 1uuf_A 196 KKVGVVGIGGLGHMGIKLAHAM-GAHVVAFTTSE 228 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSG
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 3699999999999998877778 99999998653
No 483
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=78.63 E-value=2.1 Score=41.01 Aligned_cols=37 Identities=22% Similarity=0.412 Sum_probs=32.4
Q ss_pred CCccEEEECCcHHHHHHHHHHhcCCCC---cEEEEeccCCC
Q 039605 105 ADTDVVVVGAGSAGLSCAYEISKNPNV---QVAIIEQSVSP 142 (352)
Q Consensus 105 ~~~DVvIIGgG~aGl~aA~~la~~~G~---kV~viEk~~~~ 142 (352)
.+..|||.|+|.+|+.+|..|.+. |+ ++.++|+...+
T Consensus 218 ~d~riV~~GAGaAGigia~ll~~~-G~~~~~i~l~D~~Gli 257 (487)
T 3nv9_A 218 HECRMVFIGAGSSNTTCLRLIVTA-GADPKKIVMFDSKGSL 257 (487)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHT-TCCGGGEEEEETTEEC
T ss_pred hhcEEEEECCCHHHHHHHHHHHHc-CCCcccEEEEeccccc
Confidence 356799999999999999999998 98 89999987644
No 484
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=78.60 E-value=1.7 Score=40.11 Aligned_cols=33 Identities=21% Similarity=0.239 Sum_probs=28.6
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
-.|+|+|+|+.|+.++..+... |.+|+.+++..
T Consensus 181 ~~VlV~GaG~vG~~~~qlak~~-Ga~Vi~~~~~~ 213 (360)
T 1piw_A 181 KKVGIVGLGGIGSMGTLISKAM-GAETYVISRSS 213 (360)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSS
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCH
Confidence 4699999999999998877778 99999999764
No 485
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=78.56 E-value=1.3 Score=43.56 Aligned_cols=32 Identities=38% Similarity=0.617 Sum_probs=27.9
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEecc
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQS 139 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~ 139 (352)
..++|+|+|.+|.++|..|++. |.+|+++.|.
T Consensus 365 k~vlV~GaGGig~aia~~L~~~-G~~V~i~~R~ 396 (523)
T 2o7s_A 365 KTVVVIGAGGAGKALAYGAKEK-GAKVVIANRT 396 (523)
T ss_dssp -CEEEECCSHHHHHHHHHHHHH-CC-CEEEESS
T ss_pred CEEEEECCcHHHHHHHHHHHHC-CCEEEEEECC
Confidence 3699999999999999999999 9999999875
No 486
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=78.48 E-value=2.1 Score=36.09 Aligned_cols=32 Identities=9% Similarity=0.305 Sum_probs=28.7
Q ss_pred cEEEECC-cHHHHHHHHHHh-cCCCCcEEEEeccC
Q 039605 108 DVVVVGA-GSAGLSCAYEIS-KNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGg-G~aGl~aA~~la-~~~G~kV~viEk~~ 140 (352)
-|+|.|| |..|...+..|+ +. |++|+++.+..
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~-g~~V~~~~r~~ 40 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYT-DMHITLYGRQL 40 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHC-CCEEEEEESSH
T ss_pred EEEEEeCCcHHHHHHHHHHHhcC-CceEEEEecCc
Confidence 3999995 999999999999 78 99999999864
No 487
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=78.35 E-value=1.5 Score=42.01 Aligned_cols=34 Identities=26% Similarity=0.404 Sum_probs=30.8
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
...+-|||.|..|+..|..|++. |++|+++|++.
T Consensus 11 ~~~~~ViGlGyvGlp~A~~La~~-G~~V~~~D~~~ 44 (431)
T 3ojo_A 11 GSKLTVVGLGYIGLPTSIMFAKH-GVDVLGVDINQ 44 (431)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CCccEEEeeCHHHHHHHHHHHHC-CCEEEEEECCH
Confidence 35788999999999999999999 99999999874
No 488
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=78.30 E-value=1.7 Score=41.53 Aligned_cols=34 Identities=24% Similarity=0.385 Sum_probs=30.9
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
...|+|||.|..|..+|..|... |.+|+++|+.+
T Consensus 211 GktVgIiG~G~IG~~vA~~Lka~-Ga~Viv~D~~p 244 (436)
T 3h9u_A 211 GKTACVCGYGDVGKGCAAALRGF-GARVVVTEVDP 244 (436)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC-CCEEEEECCCh
Confidence 45799999999999999999999 99999999863
No 489
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=78.29 E-value=1.9 Score=39.82 Aligned_cols=45 Identities=24% Similarity=0.172 Sum_probs=35.5
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCc
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGID 164 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~ 164 (352)
-.|+|+|+|+.|+.++..+... |++|+++++.+ ...++++++|..
T Consensus 191 ~~VlV~G~G~vG~~a~qla~~~-Ga~Vi~~~~~~------------~~~~~~~~lGa~ 235 (363)
T 3uog_A 191 DRVVVQGTGGVALFGLQIAKAT-GAEVIVTSSSR------------EKLDRAFALGAD 235 (363)
T ss_dssp CEEEEESSBHHHHHHHHHHHHT-TCEEEEEESCH------------HHHHHHHHHTCS
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCEEEEEecCc------------hhHHHHHHcCCC
Confidence 4699999999999998887778 99999998653 234566777764
No 490
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=78.03 E-value=2.3 Score=39.33 Aligned_cols=32 Identities=19% Similarity=0.322 Sum_probs=28.3
Q ss_pred ccEEEECC-cHHHHHHHHHHhcCCCC--cEEEEecc
Q 039605 107 TDVVVVGA-GSAGLSCAYEISKNPNV--QVAIIEQS 139 (352)
Q Consensus 107 ~DVvIIGg-G~aGl~aA~~la~~~G~--kV~viEk~ 139 (352)
..|.|||+ |..|..+|+.++.. |+ .++++|..
T Consensus 9 ~KV~ViGaaG~VG~~~a~~l~~~-g~~~evvLiDi~ 43 (343)
T 3fi9_A 9 EKLTIVGAAGMIGSNMAQTAAMM-RLTPNLCLYDPF 43 (343)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHT-TCCSCEEEECSC
T ss_pred CEEEEECCCChHHHHHHHHHHhc-CCCCEEEEEeCC
Confidence 36999997 99999999999988 75 89999974
No 491
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=77.92 E-value=1.7 Score=40.36 Aligned_cols=34 Identities=21% Similarity=0.373 Sum_probs=28.7
Q ss_pred CccEEEECCcHHHHHHHHHHhcCCCC-cEEEEeccC
Q 039605 106 DTDVVVVGAGSAGLSCAYEISKNPNV-QVAIIEQSV 140 (352)
Q Consensus 106 ~~DVvIIGgG~aGl~aA~~la~~~G~-kV~viEk~~ 140 (352)
.-.|+|+|+|+.|+.++..+... |+ +|++++..+
T Consensus 194 g~~VlV~GaG~vG~~a~q~a~~~-Ga~~Vi~~~~~~ 228 (378)
T 3uko_A 194 GSNVAIFGLGTVGLAVAEGAKTA-GASRIIGIDIDS 228 (378)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHH-TCSCEEEECSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCH
Confidence 34699999999999988877778 98 799998654
No 492
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=77.91 E-value=1.1 Score=41.07 Aligned_cols=33 Identities=24% Similarity=0.292 Sum_probs=30.1
Q ss_pred cEEEECCcHHHHHHHHHHhcCCC-------CcEEEEeccCC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPN-------VQVAIIEQSVS 141 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G-------~kV~viEk~~~ 141 (352)
.|.|||+|.-|...|..|++. | .+|.++++...
T Consensus 10 kI~iIG~G~mG~~~a~~l~~~-g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 10 KVCIVGSGNWGSAIAKIVGGN-AAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-HHHCTTEEEEEEEECCCCB
T ss_pred eEEEECCCHHHHHHHHHHHhc-CCcccCCCCeEEEEEcChh
Confidence 699999999999999999998 8 89999998653
No 493
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=77.81 E-value=1.3 Score=36.81 Aligned_cols=32 Identities=13% Similarity=0.195 Sum_probs=28.0
Q ss_pred ccEEEEC-CcHHHHHHHHHHhcCCCCcEEEEecc
Q 039605 107 TDVVVVG-AGSAGLSCAYEISKNPNVQVAIIEQS 139 (352)
Q Consensus 107 ~DVvIIG-gG~aGl~aA~~la~~~G~kV~viEk~ 139 (352)
-.|+|+| +|..|..++..+... |.+|+++++.
T Consensus 40 ~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~ 72 (198)
T 1pqw_A 40 ERVLIHSATGGVGMAAVSIAKMI-GARIYTTAGS 72 (198)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHH-TCEEEEEESS
T ss_pred CEEEEeeCCChHHHHHHHHHHHc-CCEEEEEeCC
Confidence 3589999 599999999999888 9999999875
No 494
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=77.72 E-value=2 Score=41.54 Aligned_cols=32 Identities=16% Similarity=0.387 Sum_probs=29.8
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
+|.|||.|.-|...|..|++. |++|.++++..
T Consensus 4 ~IgvIG~G~mG~~lA~~La~~-G~~V~v~dr~~ 35 (482)
T 2pgd_A 4 DIALIGLAVMGQNLILNMNDH-GFVVCAFNRTV 35 (482)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEECSST
T ss_pred eEEEEChHHHHHHHHHHHHHC-CCeEEEEeCCH
Confidence 699999999999999999999 99999999853
No 495
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=77.32 E-value=1.5 Score=40.00 Aligned_cols=45 Identities=20% Similarity=0.226 Sum_probs=35.3
Q ss_pred ccEEEECCcHHHHHHHHHHhcCCCCcEEEEeccCCCCCCcceeecchHHHHHHHcCCc
Q 039605 107 TDVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSVSPGGASGSVVRKPAHLFLDELGID 164 (352)
Q Consensus 107 ~DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~~~GG~~~~~~~~~~~~~l~~~Gi~ 164 (352)
-.|+|+|+|+.|+.++..+... |.+|+.+++.+ ...++++++|..
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~------------~~~~~~~~lGa~ 212 (340)
T 3s2e_A 168 QWVVISGIGGLGHVAVQYARAM-GLRVAAVDIDD------------AKLNLARRLGAE 212 (340)
T ss_dssp SEEEEECCSTTHHHHHHHHHHT-TCEEEEEESCH------------HHHHHHHHTTCS
T ss_pred CEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCH------------HHHHHHHHcCCC
Confidence 4699999999999998877778 99999998753 234566777754
No 496
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=77.24 E-value=1.4 Score=40.92 Aligned_cols=33 Identities=12% Similarity=0.197 Sum_probs=30.2
Q ss_pred cEEEECCcHHHHHHHHHHhcCCC-------CcEEEEeccCC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPN-------VQVAIIEQSVS 141 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G-------~kV~viEk~~~ 141 (352)
.|.|||+|.-|.+.|..|++. | .+|.++++...
T Consensus 23 kI~iIGaG~mG~alA~~L~~~-G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGTN-AKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHHH-HHHCTTBCSCEEEECCSCC
T ss_pred EEEEECcCHHHHHHHHHHHHc-CCccCCCCCeEEEEECChh
Confidence 599999999999999999998 8 99999998653
No 497
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=77.23 E-value=2.5 Score=41.07 Aligned_cols=32 Identities=16% Similarity=0.387 Sum_probs=30.3
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
+|.|||.|.-|...|..|++. |++|++.++..
T Consensus 6 kIgiIGlG~MG~~lA~~L~~~-G~~V~v~dr~~ 37 (484)
T 4gwg_A 6 DIALIGLAVMGQNLILNMNDH-GFVVCAFNRTV 37 (484)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEECSST
T ss_pred EEEEEChhHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 799999999999999999999 99999999864
No 498
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=77.17 E-value=2.8 Score=36.42 Aligned_cols=32 Identities=16% Similarity=0.367 Sum_probs=29.6
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCC----cEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNV----QVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~----kV~viEk~~ 140 (352)
.|.|||+|.-|...|..|.+. |+ +|.+++++.
T Consensus 4 ~i~iIG~G~mG~~~a~~l~~~-g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 4 QIGFIGCGNMGMAMIGGMINK-NIVSSNQIICSDLNT 39 (247)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TSSCGGGEEEECSCH
T ss_pred eEEEECccHHHHHHHHHHHhC-CCCCCCeEEEEeCCH
Confidence 599999999999999999999 98 999999864
No 499
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=77.12 E-value=2.1 Score=41.41 Aligned_cols=32 Identities=34% Similarity=0.540 Sum_probs=29.7
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
+|.|||.|.-|...|..|++. |++|.++++..
T Consensus 3 kIgVIG~G~mG~~lA~~La~~-G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEK-GFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHT-TCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 599999999999999999999 99999999853
No 500
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=77.02 E-value=2.3 Score=39.28 Aligned_cols=32 Identities=25% Similarity=0.228 Sum_probs=30.0
Q ss_pred cEEEECCcHHHHHHHHHHhcCCCCcEEEEeccC
Q 039605 108 DVVVVGAGSAGLSCAYEISKNPNVQVAIIEQSV 140 (352)
Q Consensus 108 DVvIIGgG~aGl~aA~~la~~~G~kV~viEk~~ 140 (352)
.|.|||.|.-|.+.|..|.+. |.+|.++++.+
T Consensus 10 kIgIIG~G~mG~slA~~L~~~-G~~V~~~dr~~ 41 (341)
T 3ktd_A 10 PVCILGLGLIGGSLLRDLHAA-NHSVFGYNRSR 41 (341)
T ss_dssp CEEEECCSHHHHHHHHHHHHT-TCCEEEECSCH
T ss_pred EEEEEeecHHHHHHHHHHHHC-CCEEEEEeCCH
Confidence 699999999999999999999 99999999864
Done!