BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039609
(248 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q55729|SYM_SYNY3 Methionine--tRNA ligase OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=metG PE=3 SV=1
Length = 532
Score = 183 bits (464), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 97/237 (40%), Positives = 141/237 (59%), Gaps = 35/237 (14%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
MGKSLGNT++P +L++ +G DA RY+FLKE+EFG DGD++E RF+ ++NA LAN +GNLL
Sbjct: 306 MGKSLGNTVDPLDLINRYGEDAFRYYFLKEIEFGKDGDFNEQRFVNVLNADLANDLGNLL 365
Query: 61 NRTLGLLKKNCQ--------STLVVDSAVAAEGTAFKDTVEKLVETARGHYENLSLSSAC 112
NRTLG++KK CQ + L D+ + A G+ L E YE LS + AC
Sbjct: 366 NRTLGMVKKYCQGQGPQVMATDLAPDNPLKALGS-------HLGEEVSSAYERLSFTDAC 418
Query: 113 EAVLDISNAGNSYMDEHVPWSRFKQGGAASEAAAKDLVI-ILEAMRIIAVALSPVTPNLC 171
EA+ + AGN Y+D+ PW FKQG S+ +D++ +LE++R+ A LSP+ P L
Sbjct: 419 EAIFTLVRAGNKYIDDMAPWKLFKQG---SQKEVEDVLYSVLESIRLSAYLLSPIVPRLS 475
Query: 172 WRIYEQLGYS------------NEQFGNAAWSDTKWGGLKGGQVMAQPKPVFGRIEL 216
+IY+QLG++ E+F WG L Q + +P+F ++EL
Sbjct: 476 TKIYQQLGFTWDFDQWRSPLEQAEEFNRHQ----SWGQLGANQNLPPAQPIFTKLEL 528
>sp|Q8Z068|SYM_NOSS1 Methionine--tRNA ligase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576)
GN=metG PE=3 SV=1
Length = 530
Score = 181 bits (460), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 98/221 (44%), Positives = 136/221 (61%), Gaps = 9/221 (4%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
MGKSLGNT++P LV +GSDAVRY+FLKE+EFG DGD++E RFI ++NA LAN +GNLL
Sbjct: 308 MGKSLGNTVDPVGLVQQYGSDAVRYYFLKEIEFGKDGDFNEVRFIHVLNADLANDLGNLL 367
Query: 61 NRTLGLLKKNC--QSTLVVDSAVAAEGTAFKDTVEKLVETARGHYENLSLSSACEAVLDI 118
NRTL ++KK C + + + + AE T K L + YE L+ + AC VL +
Sbjct: 368 NRTLNMVKKYCANYALSITNEDIPAENT-LKALGVDLGAKVKQAYEVLAFNQACGVVLSL 426
Query: 119 SNAGNSYMDEHVPWSRFKQGGAASEAAAKDLVIILEAMRIIAVALSPVTPNLCWRIYEQL 178
A N ++D+ PWS +KQ + L +LE++R+ A LSPV PN+ IY+QL
Sbjct: 427 VQASNKFIDDQAPWSLYKQ--ERQQEVETVLYTVLESVRLAAYLLSPVIPNISSNIYQQL 484
Query: 179 GYS---NEQFGNAAWS-DTKWGGLKGGQVMAQPKPVFGRIE 215
G+ NEQ ++ +WG L Q + QP+P+F RIE
Sbjct: 485 GFGINFNEQTDITPFAIHAQWGLLSNKQQLGQPQPIFKRIE 525
>sp|P59081|SYM_THEEB Methionine--tRNA ligase OS=Thermosynechococcus elongatus (strain
BP-1) GN=metG PE=3 SV=1
Length = 529
Score = 181 bits (460), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 96/228 (42%), Positives = 132/228 (57%), Gaps = 8/228 (3%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
MGKSLGNTL+P LV +G+DAVRY+F+KEVEFG DGD+SE RF+ I+NA LAN +GNLL
Sbjct: 302 MGKSLGNTLDPFALVAQYGADAVRYYFMKEVEFGRDGDFSETRFVTILNADLANDLGNLL 361
Query: 61 NRTLGLLKKNCQSTLV-VDSAVAAEGTAFKDTVEKLVETARGHYENLSLSSACEAVLDIS 119
NRTL + K + V A + E L +T Y L+ C+ L ++
Sbjct: 362 NRTLKMAWKYTDGKVPNVQGAAIPREHPLRQLAEHLSQTYGQGYRQLAFHEVCQQALTLA 421
Query: 120 NAGNSYMDEHVPWSRFKQGGAASEAAAKDLVIILEAMRIIAVALSPVTPNLCWRIYEQLG 179
AGN ++DE PW R++ G A A A+ L +LE++R++A L+P+ P L IY QLG
Sbjct: 422 RAGNKFLDEEAPWKRYRAGETA--AVAEILYCVLESVRLVAYVLAPIIPQLSEAIYGQLG 479
Query: 180 YSNEQFGNAAWS-----DTKWGGLKGGQVMAQPKPVFGRIELKTGTED 222
YS G+ A +WG L Q +A P+P+F ++ L D
Sbjct: 480 YSIRFNGSIAPDLLGDRQAQWGVLPASQPLANPEPIFQKLLLPATVAD 527
>sp|Q9CD55|SYM_MYCLE Methionine--tRNA ligase OS=Mycobacterium leprae (strain TN) GN=metG
PE=3 SV=1
Length = 537
Score = 125 bits (313), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 120/244 (49%), Gaps = 9/244 (3%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
M KS+GN ++P LV FG D VRYF L+E+ FG DG+YSE+ I +N LAN GNL
Sbjct: 302 MSKSVGNIVDPMALVQTFGVDQVRYFLLREIPFGQDGNYSEEAIITRMNTDLANEFGNLA 361
Query: 61 NRTLGLLKKNCQSTLVVDSAVAAEGTAFKDTVEKLVETARGHYENLSLSSACEAVLDISN 120
R+L ++ KN + S + TA T + L+E RG+++ +++ A EA+ +
Sbjct: 362 QRSLSMVAKNLGGVVPEPSEFTSADTALLTTADGLLERVRGNFDGQAMNLALEAIWLMLG 421
Query: 121 AGNSYMDEHVPWSRFKQGGAASEAAAKD-LVIILEAMRIIAVALSPVTPNLCWRIYEQLG 179
N Y PW K A +A + L E +RI A+ + PV P ++ + LG
Sbjct: 422 EANKYFSSQQPWILRKSESEADQARFRTVLYTTCEVVRIAALLVQPVMPESAGKMLDLLG 481
Query: 180 YSNEQFGNAAWSDTKWGGLKGGQVMAQPKPVFGRIELKTGTEDGGEPAAAKQVAKKKEKK 239
+Q A S L G V+ P VF R + +G +P K +K++E
Sbjct: 482 QEEDQRAFTAVSVR----LAPGTVLPPPTGVFPRYQ--PSEIEGADP--VKSSSKRREHN 533
Query: 240 AKAQ 243
+ +
Sbjct: 534 KRRE 537
>sp|Q8RE57|SYM_FUSNN Methionine--tRNA ligase OS=Fusobacterium nucleatum subsp. nucleatum
(strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131)
GN=metG PE=3 SV=1
Length = 636
Score = 125 bits (313), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 105/214 (49%), Gaps = 3/214 (1%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
M KS GN + P + + +G DA RY+ L+E FG DGDYS I +N+ LAN +GNLL
Sbjct: 299 MSKSRGNVVNPYDEIKKYGVDAFRYYLLREANFGTDGDYSTKGIIGRLNSDLANDLGNLL 358
Query: 61 NRTLGLLKKNCQSTLVVDSAVAAEGTAFKDTVEKLVETARGHYENLSLSSACEAVLDISN 120
NRTLG+ KK T+V S V K +V+ + S A E + +
Sbjct: 359 NRTLGMYKKYFNGTIVSSSTVEPIDDEIKSMFNDVVKDVEKYMYLFEFSRALETIWKFIS 418
Query: 121 AGNSYMDEHVPWSRFKQGGAASEAAAKDLVIILEAMRIIAVALSPVTPNLCWRIYEQLGY 180
N Y+DE +PW+ K + AA + I+ E + IA ++P P +I QLG
Sbjct: 419 RLNKYIDETMPWTLAKNEAKKARLAAV-MNILCEGLYKIAFLIAPYMPESAQKISNQLGI 477
Query: 181 SNEQFGNAAWSDTK-WGGLKGGQVMAQPKPVFGR 213
++ N + D K W K G + + P+F R
Sbjct: 478 -DKDITNLKFDDIKEWSIFKEGHKLGEASPIFPR 510
>sp|Q8RDD1|SYM_THETN Methionine--tRNA ligase OS=Thermoanaerobacter tengcongensis (strain
DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN=metG PE=3
SV=1
Length = 638
Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 114/217 (52%), Gaps = 4/217 (1%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
M KS GN ++P ELV +G DA+RYF L+EV FG DG +S + I +N+ LAN +GNLL
Sbjct: 297 MSKSKGNVVDPKELVDRYGVDAIRYFLLREVPFGADGVFSNEALINRINSDLANDLGNLL 356
Query: 61 NRTLGLLKKNCQSTLVVDSAVAAEGTAFKDTVEKLVETARGHYENLSLSSACEAVLDISN 120
+RT+ +++K L S+ + + L + + + L S+A + + +
Sbjct: 357 SRTVTMIEKYFDGVLPKPSSQEEIDEDLINVAQNLPQKVEEYMDKLQFSNALIEIWKLVS 416
Query: 121 AGNSYMDEHVPWSRFKQGGAASEAAAKDLVIILEAMRIIAVALSPVTPNLCWRIYEQLGY 180
N Y+DE +PW K L + E++R I + +SP PN +++EQLG
Sbjct: 417 RANKYIDETMPWVLAKDESKRGRLGTV-LYNLAESLRFIGILISPFMPNTPKKMFEQLGI 475
Query: 181 SNEQFGNAAWSDTKWGGLKGGQVMAQPKPVFGRIELK 217
+ + W K+G LK G + + + +F RI+++
Sbjct: 476 TEDL---TTWESLKFGLLKEGTRVKRGEILFPRIDVE 509
>sp|Q837B3|SYM_ENTFA Methionine--tRNA ligase OS=Enterococcus faecalis (strain ATCC
700802 / V583) GN=metG PE=3 SV=1
Length = 669
Score = 117 bits (293), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 115/223 (51%), Gaps = 12/223 (5%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
M KS GN + P LV +G DA+RY+ L+ + FG+DG ++ + F+ +N LAN +GNLL
Sbjct: 310 MSKSKGNVVYPEMLVERYGLDALRYYLLRAIPFGSDGVFTPEDFVSRLNYDLANDLGNLL 369
Query: 61 NRTLGLLKKNCQSTLVVDSAVAAEGTAFKDTVEKLVETARGHY----ENLSLSSACEAVL 116
NRT+ ++ K C + A A++ T F + G Y E + ++A +
Sbjct: 370 NRTIAMINKYCDGKV---PAYASKVTPFDSELSTTAANVIGKYHEAMEKMEFNTAIAEIW 426
Query: 117 DISNAGNSYMDEHVPWSRFKQGGAASEAAAKDLVIILEAMRIIAVALSPVTPNLCWRIYE 176
+ + N Y+DE PW K+ +E + ++ + E++RI+A+ L PV +I+E
Sbjct: 427 TLVSRANKYIDETAPWVLAKEEEKRNELESV-MIHLAESLRIVAILLQPVMTETPGKIFE 485
Query: 177 QLGYSNEQFGNAAWSDTKWGGLKGG-QVMAQPKPVFGRIELKT 218
QLG E + +G V ++ P+F R+E++T
Sbjct: 486 QLGLDPETMN---MENIHFGEFPTDVTVTSKGTPIFPRLEIET 525
>sp|P59078|SYM_BRUSU Methionine--tRNA ligase OS=Brucella suis biovar 1 (strain 1330)
GN=metG PE=3 SV=1
Length = 515
Score = 117 bits (293), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 104/213 (48%), Gaps = 6/213 (2%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
M KS+GN ++P ELV +G D +RYF ++EV FG DG YS + + NA LAN +GNL
Sbjct: 301 MSKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLA 360
Query: 61 NRTLGLLKKNCQSTLVVDSAVAAEGTAFKDTVEKLVETARGHYENLSLSSACEAVLDISN 120
R+L ++ KNC+ + A + A D + +ETAR ++ +L A A+ +
Sbjct: 361 QRSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVA 420
Query: 121 AGNSYMDEHVPWSRFKQGGAASEAAAKDLVIILEAMRIIAVALSPVTPNLCWRIYEQLGY 180
N Y PW+ K A L + E +R + + + P P ++ + L
Sbjct: 421 EANRYFAGQEPWALRKTDPARMGTV---LYVTAEVLRRVGIMVQPFIPQSAEKLLDILAV 477
Query: 181 SNEQFGNAAWSDTKWGGLKGGQVMAQPKPVFGR 213
++ ++D L GG + P+PVF R
Sbjct: 478 PADK---RQFADVLASPLAGGTDLPAPQPVFPR 507
>sp|Q8YH17|SYM_BRUME Methionine--tRNA ligase OS=Brucella melitensis biotype 1 (strain
16M / ATCC 23456 / NCTC 10094) GN=metG PE=3 SV=2
Length = 515
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 104/213 (48%), Gaps = 6/213 (2%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
M KS+GN ++P ELV +G D +RYF ++EV FG DG YS + + NA LAN +GNL
Sbjct: 301 MSKSVGNVIDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLA 360
Query: 61 NRTLGLLKKNCQSTLVVDSAVAAEGTAFKDTVEKLVETARGHYENLSLSSACEAVLDISN 120
R+L ++ KNC+ + A + A D + +ETAR ++ +L A A+ +
Sbjct: 361 QRSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMDDQALHLALGAIFAVVA 420
Query: 121 AGNSYMDEHVPWSRFKQGGAASEAAAKDLVIILEAMRIIAVALSPVTPNLCWRIYEQLGY 180
N Y PW+ K A L + E +R + + + P P ++ + L
Sbjct: 421 EANRYFAGQEPWALRKTDPARMGTV---LYVTAEVLRRVGIMVQPFIPQSAEKLLDILAA 477
Query: 181 SNEQFGNAAWSDTKWGGLKGGQVMAQPKPVFGR 213
++ ++D L GG + P+PVF R
Sbjct: 478 PADK---RQFADVLASPLAGGTDLPAPQPVFPR 507
>sp|Q92PX0|SYM_RHIME Methionine--tRNA ligase OS=Rhizobium meliloti (strain 1021) GN=metG
PE=3 SV=1
Length = 516
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 107/213 (50%), Gaps = 5/213 (2%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
M KSLGN ++P LV +FG D +RYFFL+EV FG DG YSE+ +N+ LAN IGNL
Sbjct: 303 MSKSLGNVVDPFNLVEHFGLDQIRYFFLREVSFGQDGSYSEEGIATRINSDLANGIGNLA 362
Query: 61 NRTLGLLKKNCQSTLVVDSAVAAEGTAFKDTVEKLVETARGHYENLSLSSACEAVLDISN 120
+R+L ++ KNC + + + E A + L+ TAR + A A++ + +
Sbjct: 363 SRSLSMIVKNCDGQVPLCGPLTDEDKAMLAAADSLIGTAREEMGKQLIHRALAAIIAVVS 422
Query: 121 AGNSYMDEHVPWSRFKQGGAASEAAAKDLVIILEAMRIIAVALSPVTPNLCWRIYEQLGY 180
+ Y PW+ K+ + A L + E +R +A+ L P P ++ + +
Sbjct: 423 ETDRYFAGQEPWA-LKKTDPSRMATV--LYVTAEVVRQVAILLQPFMPESAGKLLDLVAV 479
Query: 181 SNEQFGNAAWSDTKWGGLKGGQVMAQPKPVFGR 213
++ A + G L G + PKPVF R
Sbjct: 480 PTDRRDFAHLGEA--GRLVSGTPLEAPKPVFPR 510
>sp|P37465|SYM_BACSU Methionine--tRNA ligase OS=Bacillus subtilis (strain 168) GN=metG
PE=3 SV=1
Length = 664
Score = 116 bits (290), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 113/217 (52%), Gaps = 6/217 (2%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
M KS GN ++P L+ +G D +RY+ L+EV FG+DG ++ + F++ +N LAN +GNLL
Sbjct: 312 MSKSKGNVVDPVTLIERYGLDELRYYLLREVPFGSDGVFTPEGFVERINYDLANDLGNLL 371
Query: 61 NRTLGLLKKNCQSTL-VVDSAVAAEGTAFKDTVEKLVETARGHYENLSLSSACEAVLDIS 119
NRT+ ++ K + AV E+ V+ EN+ S A + +
Sbjct: 372 NRTVAMINKYFDGQIGSYKGAVTEFDHTLTSVAEETVKAYEKAMENMEFSVALSTLWQLI 431
Query: 120 NAGNSYMDEHVPWSRFKQGGAASEAAAKDLVIILEAMRIIAVALSPVTPNLCWRIYEQLG 179
+ N Y+DE PW + A E + + E++RI AV L P +++EQLG
Sbjct: 432 SRTNKYIDETAPWV-LAKDPAKEEELRSVMYHLAESLRISAVLLQPFLTKTPEKMFEQLG 490
Query: 180 YSNEQFGNAAW-SDTKWGGLKGGQVMAQPKPVFGRIE 215
++E AW S T +G LK +V + +P+F R+E
Sbjct: 491 ITDESL--KAWDSITAFGQLKDTKV-QKGEPLFPRLE 524
>sp|Q8UFA2|SYM_AGRT5 Methionine--tRNA ligase OS=Agrobacterium tumefaciens (strain C58 /
ATCC 33970) GN=metG PE=3 SV=1
Length = 516
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 102/213 (47%), Gaps = 5/213 (2%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
M KSLGN ++P LV +FG D VRYFF++EV FG DG YSE+ +NA LAN IGNL
Sbjct: 303 MSKSLGNVVDPANLVAHFGLDPVRYFFMREVSFGQDGSYSEEGIATRINADLANGIGNLA 362
Query: 61 NRTLGLLKKNCQSTLVVDSAVAAEGTAFKDTVEKLVETARGHYENLSLSSACEAVLDISN 120
+R+L ++ KNC + A + A + + L+ R + A A++ + +
Sbjct: 363 SRSLSMIVKNCDGQIPTPGAFNDDDKAMLASADGLLAVCREEMGKQLIHRALAAIIAVVS 422
Query: 121 AGNSYMDEHVPWSRFKQGGAASEAAAKDLVIILEAMRIIAVALSPVTPNLCWRIYEQLGY 180
+ Y PW+ K E L + E +R I + L P P C ++ + +
Sbjct: 423 ETDRYFASQEPWALKKTD---PERMGTVLYVTAEVVRQIGILLQPFMPQSCEKLLDLVAA 479
Query: 181 SNEQFGNAAWSDTKWGGLKGGQVMAQPKPVFGR 213
+ A + G L G + PKPVF R
Sbjct: 480 PADGRDFTALGEA--GRLAPGTPLEAPKPVFPR 510
>sp|Q88Z97|SYM_LACPL Methionine--tRNA ligase OS=Lactobacillus plantarum (strain ATCC
BAA-793 / NCIMB 8826 / WCFS1) GN=metG PE=3 SV=1
Length = 683
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 127/255 (49%), Gaps = 14/255 (5%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
M KS GN + P LV +G DA+RY+ +K + +GNDG ++ + F+ VN LAN +GNLL
Sbjct: 312 MSKSKGNVIYPETLVERYGLDALRYYLVKAMPYGNDGLFTPEDFVARVNYDLANDLGNLL 371
Query: 61 NRTLGLLKKNCQSTLVVDSAVAAEGTAFKDTVEKLVETARGHY----ENLSLSSACEAVL 116
NRT+ ++ K L A A T F +E T ++ ++L LS A V
Sbjct: 372 NRTIAMINKYEDGQL---PAFKAGVTEFDADLEATAATTIKNFNACMDSLHLSDALAEVW 428
Query: 117 DISNAGNSYMDEHVPWSRFKQGGA-ASEAAAKDLVIILEAMRIIAVALSPVTPNLCWRIY 175
+ + N Y+DE PW K A ++ A + + ++R+IA +SPV + I+
Sbjct: 429 KLVSRTNKYIDETAPWQLAKSDDANDADKLASVMAHLAASLRVIASLISPVMTHAPKEIF 488
Query: 176 EQLGYSNEQFGNAAWSDTKWGGLK-GGQVMAQPKPVFGRIELKTGTE--DGGEPAAAKQV 232
QLG A +D + L G QV+A+ P+F R+++ E G + KQ
Sbjct: 489 TQLGLDP---ATLAIADLQLADLPAGAQVVAKGTPIFPRVDMDAEVEFLKGKMTKSDKQK 545
Query: 233 AKKKEKKAKAQAVAE 247
+K + AK +A E
Sbjct: 546 GRKAMENAKHEAEVE 560
>sp|P23920|SYM_GEOSE Methionine--tRNA ligase OS=Geobacillus stearothermophilus GN=metG
PE=3 SV=1
Length = 649
Score = 115 bits (287), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 132/257 (51%), Gaps = 20/257 (7%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
M KS GN ++P ++ +G DA+RY+ L+EV FG+DG ++ + FI+ +N LAN +GNLL
Sbjct: 299 MSKSKGNVVDPVMIIDRYGLDALRYYLLREVPFGSDGVFTPEGFIERINYDLANDLGNLL 358
Query: 61 NRTLGLLKKNCQSTLVVDSAVAAEGTAF-KDTVEKLVETARGH---YENLSLSSACEAVL 116
+RT+ +++K + T F +D E E R + E + S A AV
Sbjct: 359 HRTVAMIEKYFGGAI---PPYRGPKTPFDRDLSETAREVVRQYEEAMERMEFSVALSAVW 415
Query: 117 DISNAGNSYMDEHVPWSRFKQGGAASEAAAKDLVIILEAMRIIAVALSPVTPNLCWRIYE 176
+ N Y+DE PW K+ E A+ + + E++R AV L P RI+
Sbjct: 416 QLIGRTNKYIDETQPWVLAKEESKREELASV-MAHLAESLRYTAVLLQPFLTRTPERIFT 474
Query: 177 QLGYSNEQFGNAAW-SDTKWGGLKGGQVMAQPKPVFGRIELKTGTE------DGGEPAAA 229
QLG S+ W S +G + G + + +P+F R+++ E GG+PA A
Sbjct: 475 QLGISDRSLKE--WDSLYDFGLIPEGTNVQKGEPLFPRLDIGVEVEYIKAHMQGGKPAEA 532
Query: 230 KQVAKKKEKKAKAQAVA 246
AK++++ A+A+ ++
Sbjct: 533 ---AKEEKQAARAEEIS 546
>sp|Q92F90|SYM_LISIN Methionine--tRNA ligase OS=Listeria innocua serovar 6a (strain CLIP
11262) GN=metG PE=3 SV=1
Length = 664
Score = 114 bits (285), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 124/251 (49%), Gaps = 28/251 (11%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
M KS GN ++P L+ +G DA+RY+ L+EV FG+DG ++ + F+ VN LAN +GNLL
Sbjct: 311 MSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNYDLANDLGNLL 370
Query: 61 NRTLGLLKKNCQSTLVVDSAVAAEGTAFKDTV----EKLVETARGHYENLSLSSACEAVL 116
NRT+ ++ K + A T F T+ +V+ G +++ S A +
Sbjct: 371 NRTVAMINKYFDGEI---PAYQGNVTEFDQTLVDFKNNVVKEYEGSMDHMQFSVALNQLW 427
Query: 117 DISNAGNSYMDEHVPWSRFKQGGAASEAAAKDLVIILEAMRIIAVALSPVTPNLCWRIYE 176
+ + N Y+DE PW+ K+ +E A+ + + E +RIIAV L P I+
Sbjct: 428 SLISRTNKYIDETAPWALAKEEDKRTELASV-MTHLAENLRIIAVLLQPFLTRTPGEIFL 486
Query: 177 QLGYSNEQFGNAAWSDTKWGGL-------KGGQVMAQPKPVFGRIELK---TGTED---G 223
QLG E KW + +G V+ + P+F R++ + T +D G
Sbjct: 487 QLGLQEENL-------KKWDSIYGYGEIPEGTTVVKKGTPIFPRLDAEVEVTYIQDEMKG 539
Query: 224 GEPAAAKQVAK 234
PA A++ A+
Sbjct: 540 SAPAPAEETAE 550
>sp|Q5HII6|SYM_STAAC Methionine--tRNA ligase OS=Staphylococcus aureus (strain COL)
GN=metG PE=3 SV=1
Length = 657
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 132/256 (51%), Gaps = 25/256 (9%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
M KS GN ++PN L+ +G DA RY+ ++E+ FG+DG ++ + F++ N LAN +GNL+
Sbjct: 309 MSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFDLANDLGNLV 368
Query: 61 NRTLGLLKKNCQSTLVVDSAVAAEGTAFKDTVEKL-VETARGH---YENLSLSSACEAVL 116
NRT+ ++ K L A + +E + +ET + + E+L S A V
Sbjct: 369 NRTISMVNKYFDGEL---PAYQGPLHELDEEMEAMALETVKSYTESMESLQFSVALSTVW 425
Query: 117 DISNAGNSYMDEHVPWSRFKQGGAASEAAAKDLV-----IILEAMRIIAVALSPVTPNLC 171
+ N Y+DE PW A + + KD++ ++E +R AV L P +
Sbjct: 426 KFISRTNKYIDETTPWV------LAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAP 479
Query: 172 WRIYEQLGYSNEQFGNAAWSDTKWGGL-KGGQVMAQPKPVFGRIELKTG---TEDGGEPA 227
I+EQL +N QF + S ++G L + V QPKP+F R++ + ++ +P
Sbjct: 480 KEIFEQLNINNPQFMEFS-SLEQYGVLNESIMVTGQPKPIFPRLDSEAEIAYIKESMQPP 538
Query: 228 AAKQVAKKKEKKAKAQ 243
A K+ +K+E +K Q
Sbjct: 539 ATKE--EKEEIPSKPQ 552
>sp|Q9KGK8|SYM_BACHD Methionine--tRNA ligase OS=Bacillus halodurans (strain ATCC BAA-125
/ DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=metG PE=3
SV=1
Length = 660
Score = 112 bits (280), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 120/228 (52%), Gaps = 24/228 (10%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
M KS GN ++P L+ +G DA+RY+ L+EV FG+DG ++ + F++ VN LAN +GNLL
Sbjct: 312 MSKSKGNVVDPVPLIDRYGLDALRYYLLREVPFGSDGVFTPEAFVERVNYDLANDLGNLL 371
Query: 61 NRTLGLLKKNCQSTLVVDSAVAAEGTAFK-DTVEKLVETAR---GHYENLSLSSACEAVL 116
NRT+ +++K + + +GT F D VE + T + E + S A A+
Sbjct: 372 NRTVAMIEKYFDGKI---PSYVKDGTPFDADLVELVYSTVKKVEDAMEEMEFSIALTAIG 428
Query: 117 DISNAGNSYMDEHVPW------SRFKQGGAASEAAAKDLVIILEAMRIIAVALSPVTPNL 170
+ + N Y+DE PW S+ +Q GAA A E++R ++V L P
Sbjct: 429 QLISRTNKYIDETQPWVLAKDESKREQLGAAMYHLA-------ESIRYVSVLLQPFMTKA 481
Query: 171 CWRIYEQLGYSNEQFGNAAWSDTK-WGGLKGGQVMAQPKPVFGRIELK 217
+I+EQLG + W + +G + G + + +P+F R++++
Sbjct: 482 PQKIWEQLGIDSSL---TTWESLETFGQIPGNTNVQKGQPLFPRLDVE 526
>sp|Q724N6|SYM_LISMF Methionine--tRNA ligase OS=Listeria monocytogenes serotype 4b
(strain F2365) GN=metG PE=3 SV=1
Length = 665
Score = 112 bits (279), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 112/221 (50%), Gaps = 12/221 (5%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
M KS GN ++P L+ +G DA+RY+ L+EV FG+DG ++ + F+ VN LAN +GNLL
Sbjct: 312 MSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNFDLANDLGNLL 371
Query: 61 NRTLGLLKKNCQSTLVVDSAVAAEGTAFKDTV----EKLVETARGHYENLSLSSACEAVL 116
NRT+ ++ K + A T F T+ +V+ G +++ S A +
Sbjct: 372 NRTVAMINKYFDGEI---PAYQGNVTEFDQTLVDFKNNVVKEYEGSMDHMQFSVALNQLW 428
Query: 117 DISNAGNSYMDEHVPWSRFKQGGAASEAAAKDLVIILEAMRIIAVALSPVTPNLCWRIYE 176
+ + N Y+DE PW+ K +E A+ + + E +RIIAV L P I+
Sbjct: 429 SLISRTNKYIDETAPWTLAKDEDKRTELASV-MTHLAENLRIIAVLLQPFLTRTPGEIFL 487
Query: 177 QLGYSNEQFGNAAW-SDTKWGGLKGG-QVMAQPKPVFGRIE 215
QLG E W S +G + G V+ + P+F R+E
Sbjct: 488 QLGLQEENL--KKWDSIYGYGEIPAGTTVVKKGTPIFPRLE 526
>sp|P67579|SYM_STAAN Methionine--tRNA ligase OS=Staphylococcus aureus (strain N315)
GN=metG PE=1 SV=1
Length = 657
Score = 112 bits (279), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 132/256 (51%), Gaps = 25/256 (9%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
M KS GN ++PN L+ +G DA RY+ ++E+ FG+DG ++ + F++ N LAN +GNL+
Sbjct: 309 MSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFDLANDLGNLV 368
Query: 61 NRTLGLLKKNCQSTLVVDSAVAAEGTAFKDTVEKL-VETARGH---YENLSLSSACEAVL 116
NRT+ ++ K L A + +E + +ET + + E+L S A V
Sbjct: 369 NRTISMVNKYFDGEL---PAYQGPLHELDEEMEAMALETVKSYTESMESLQFSVALSTVW 425
Query: 117 DISNAGNSYMDEHVPWSRFKQGGAASEAAAKDLV-----IILEAMRIIAVALSPVTPNLC 171
+ N Y+DE PW A + + KD++ ++E +R AV L P +
Sbjct: 426 KFISRTNKYIDETTPWV------LAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAP 479
Query: 172 WRIYEQLGYSNEQFGNAAWSDTKWGGL-KGGQVMAQPKPVFGRIELKTG---TEDGGEPA 227
I+EQL +N QF + S ++G L + V QPKP+F R++ + ++ +P
Sbjct: 480 KEIFEQLNINNPQFMEFS-SLEQYGVLTESIMVTGQPKPIFPRLDSEAEIAYIKESMQPP 538
Query: 228 AAKQVAKKKEKKAKAQ 243
A ++ +K+E +K Q
Sbjct: 539 ATEE--EKEEIPSKPQ 552
>sp|P67578|SYM_STAAM Methionine--tRNA ligase OS=Staphylococcus aureus (strain Mu50 /
ATCC 700699) GN=metG PE=1 SV=1
Length = 657
Score = 112 bits (279), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 132/256 (51%), Gaps = 25/256 (9%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
M KS GN ++PN L+ +G DA RY+ ++E+ FG+DG ++ + F++ N LAN +GNL+
Sbjct: 309 MSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFDLANDLGNLV 368
Query: 61 NRTLGLLKKNCQSTLVVDSAVAAEGTAFKDTVEKL-VETARGH---YENLSLSSACEAVL 116
NRT+ ++ K L A + +E + +ET + + E+L S A V
Sbjct: 369 NRTISMVNKYFDGEL---PAYQGPLHELDEEMEAMALETVKSYTESMESLQFSVALSTVW 425
Query: 117 DISNAGNSYMDEHVPWSRFKQGGAASEAAAKDLV-----IILEAMRIIAVALSPVTPNLC 171
+ N Y+DE PW A + + KD++ ++E +R AV L P +
Sbjct: 426 KFISRTNKYIDETTPWV------LAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAP 479
Query: 172 WRIYEQLGYSNEQFGNAAWSDTKWGGL-KGGQVMAQPKPVFGRIELKTG---TEDGGEPA 227
I+EQL +N QF + S ++G L + V QPKP+F R++ + ++ +P
Sbjct: 480 KEIFEQLNINNPQFMEFS-SLEQYGVLTESIMVTGQPKPIFPRLDSEAEIAYIKESMQPP 538
Query: 228 AAKQVAKKKEKKAKAQ 243
A ++ +K+E +K Q
Sbjct: 539 ATEE--EKEEIPSKPQ 552
>sp|Q8NY00|SYM_STAAW Methionine--tRNA ligase OS=Staphylococcus aureus (strain MW2)
GN=metG PE=3 SV=1
Length = 657
Score = 112 bits (279), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 132/256 (51%), Gaps = 25/256 (9%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
M KS GN ++PN L+ +G DA RY+ ++E+ FG+DG ++ + F++ N LAN +GNL+
Sbjct: 309 MSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFDLANDLGNLV 368
Query: 61 NRTLGLLKKNCQSTLVVDSAVAAEGTAFKDTVEKL-VETARGH---YENLSLSSACEAVL 116
NRT+ ++ K L A + +E + +ET + + E+L S A V
Sbjct: 369 NRTISMVNKYFDGEL---PAYQGPLHELDEEMEAMALETVKSYTESMESLQFSVALSTVW 425
Query: 117 DISNAGNSYMDEHVPWSRFKQGGAASEAAAKDLV-----IILEAMRIIAVALSPVTPNLC 171
+ N Y+DE PW A + + KD++ ++E +R AV L P +
Sbjct: 426 KFISRTNKYIDETTPWV------LAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAP 479
Query: 172 WRIYEQLGYSNEQFGNAAWSDTKWGGL-KGGQVMAQPKPVFGRIELKTG---TEDGGEPA 227
I+EQL +N QF + S ++G L + V QPKP+F R++ + ++ +P
Sbjct: 480 KEIFEQLNINNPQFMEFS-SLEQYGVLTESIMVTGQPKPIFPRLDSEAEIAYIKESMQPP 538
Query: 228 AAKQVAKKKEKKAKAQ 243
A ++ +K+E +K Q
Sbjct: 539 ATEE--EKEEIPSKPQ 552
>sp|Q6GBZ8|SYM_STAAS Methionine--tRNA ligase OS=Staphylococcus aureus (strain MSSA476)
GN=metG PE=3 SV=1
Length = 657
Score = 112 bits (279), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 132/256 (51%), Gaps = 25/256 (9%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
M KS GN ++PN L+ +G DA RY+ ++E+ FG+DG ++ + F++ N LAN +GNL+
Sbjct: 309 MSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFDLANDLGNLV 368
Query: 61 NRTLGLLKKNCQSTLVVDSAVAAEGTAFKDTVEKL-VETARGH---YENLSLSSACEAVL 116
NRT+ ++ K L A + +E + +ET + + E+L S A V
Sbjct: 369 NRTISMVNKYFDGEL---PAYQGPLHELDEEMEAMALETVKSYTESMESLQFSVALSTVW 425
Query: 117 DISNAGNSYMDEHVPWSRFKQGGAASEAAAKDLV-----IILEAMRIIAVALSPVTPNLC 171
+ N Y+DE PW A + + KD++ ++E +R AV L P +
Sbjct: 426 KFISRTNKYIDETTPWV------LAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAP 479
Query: 172 WRIYEQLGYSNEQFGNAAWSDTKWGGL-KGGQVMAQPKPVFGRIELKTG---TEDGGEPA 227
I+EQL +N QF + S ++G L + V QPKP+F R++ + ++ +P
Sbjct: 480 KEIFEQLNINNPQFMEFS-SLEQYGVLTESIMVTGQPKPIFPRLDSEAEIAYIKESMQPP 538
Query: 228 AAKQVAKKKEKKAKAQ 243
A ++ +K+E +K Q
Sbjct: 539 ATEE--EKEEIPSKPQ 552
>sp|Q6GJI1|SYM_STAAR Methionine--tRNA ligase OS=Staphylococcus aureus (strain MRSA252)
GN=metG PE=3 SV=1
Length = 657
Score = 111 bits (278), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 132/256 (51%), Gaps = 25/256 (9%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
M KS GN ++PN L+ +G DA RY+ ++E+ FG+DG ++ + F++ N LAN +GNL+
Sbjct: 309 MSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNFDLANDLGNLV 368
Query: 61 NRTLGLLKKNCQSTLVVDSAVAAEGTAFKDTVEKL-VETARGH---YENLSLSSACEAVL 116
NRT+ ++ K L A + +E + +ET + + E+L S A V
Sbjct: 369 NRTISMINKYFDGEL---PAYQGPLHELDEEMEAMALETVKSYTESMESLQFSVALSTVW 425
Query: 117 DISNAGNSYMDEHVPWSRFKQGGAASEAAAKDLV-----IILEAMRIIAVALSPVTPNLC 171
+ N Y+DE PW A + + KD++ ++E +R AV L P +
Sbjct: 426 KFISRTNKYIDETTPWV------LAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAP 479
Query: 172 WRIYEQLGYSNEQFGNAAWSDTKWGGL-KGGQVMAQPKPVFGRIELKTG---TEDGGEPA 227
I+EQL +N QF + S ++G L + V QPKP+F R++ + ++ +P
Sbjct: 480 KEIFEQLNINNPQFMEFS-SLEQYGVLTEPIMVTGQPKPIFPRLDSEAEIAYIKESMQPP 538
Query: 228 AAKQVAKKKEKKAKAQ 243
A ++ +K+E +K Q
Sbjct: 539 ATEE--EKEEIPSKPQ 552
>sp|P59079|SYM_OCEIH Methionine--tRNA ligase OS=Oceanobacillus iheyensis (strain DSM
14371 / JCM 11309 / KCTC 3954 / HTE831) GN=metG PE=3
SV=1
Length = 673
Score = 111 bits (277), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 114/221 (51%), Gaps = 11/221 (4%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
M KS GN + P LV +G DA+RY+ ++EV FG+DG ++ + FI VN LAN +GNLL
Sbjct: 311 MSKSKGNVVYPEMLVERYGLDALRYYLMREVAFGSDGVFTPEDFISRVNYDLANDLGNLL 370
Query: 61 NRTLGLLKKNCQSTLVVDSAVAAEGTAF----KDTVEKLVETARGHYENLSLSSACEAVL 116
NRT+ ++ K + E T+F + T V+ H E + S A + V
Sbjct: 371 NRTVAMINKYFDGKV---PEFKGEVTSFDGELQTTANNAVKEYEKHMEGMQFSDALKQVW 427
Query: 117 DISNAGNSYMDEHVPWSRFKQGGAASEAAAKDLVIILEAMRIIAVALSPVTPNLCWRIYE 176
+ + N Y+DE PW K G +E A+ +V + E++ A+ L P + +I E
Sbjct: 428 ILISRANKYIDETEPWIVAKDEGRRNELASV-MVHLAESLHAAALMLQPFLTHAPKKIAE 486
Query: 177 QLGYSNEQFGNAAWSDTKWGGL-KGGQVMAQPKPVFGRIEL 216
QLG E++G W +G + V+ + P+F R++L
Sbjct: 487 QLGLG-EEYG-LDWGTIGFGNFPENTTVVKKGTPIFPRLDL 525
>sp|Q4UMX2|SYM_RICFE Methionine--tRNA ligase OS=Rickettsia felis (strain ATCC VR-1525 /
URRWXCal2) GN=metG PE=3 SV=1
Length = 512
Score = 110 bits (276), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 112/223 (50%), Gaps = 18/223 (8%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
+ KSLGNT++P +L+ FG D VRYF ++EV FG DG+++ + +N+ L+N IGNLL
Sbjct: 296 ISKSLGNTIDPIKLIDEFGVDQVRYFLMREVTFGADGNFARSNLVTRINSELSNKIGNLL 355
Query: 61 NRTLGLLKKNCQSTL------VVDSAVAAEGTAFKDTVEKLVETARGHYENLSLSSACEA 114
RT + KN + ++D E K T K E E ++ E
Sbjct: 356 QRTTAFVYKNNDGKVPLLMQGIIDKIY--ELPILK-TASKFAEQNILLMEKTEINKVLEN 412
Query: 115 VLDISNAGNSYMDEHVPWSRFKQGGAASEAAAKDLVIILEAMRIIAVALSPVTPNLCWRI 174
++++S N Y+D PW+ K E ++ L +LE +R IA+ L P P+ ++
Sbjct: 413 IINLSEEANIYIDSEAPWNLKKTD---PEKMSEVLYTLLEVLRYIAIMLQPFIPSSANKM 469
Query: 175 YEQLGYSNEQ--FGNAAWSDTKWGGLKGGQVMAQPKPVFGRIE 215
+QLG + E+ F + + L+ G + +P +F R E
Sbjct: 470 LDQLGVNKEERLFKHL----IRDYALRAGSSILEPAIIFPRFE 508
>sp|O33925|SYM_THEMA Methionine--tRNA ligase OS=Thermotoga maritima (strain ATCC 43589 /
MSB8 / DSM 3109 / JCM 10099) GN=metG PE=3 SV=1
Length = 629
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 112/224 (50%), Gaps = 19/224 (8%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
+ KSLGN ++P V +G+D VRY+ ++++ FG DGD+SE+R + +N+ LAN GNLL
Sbjct: 298 ISKSLGNAIDPRFFVKRYGNDVVRYYLIRDIMFGKDGDFSEERLVHRLNSDLANDYGNLL 357
Query: 61 NRTLGLLKKNCQSTLVVDSAVAAEGTAFKDTVEKLVETARGHYE---NLSLSSACEAVLD 117
+R ++KK L SA + K E+ ET ++E + L+ A + + +
Sbjct: 358 HRITAMIKKYFNGRLPSPSAQEGFDSWLK---ERFFETKDAYHELMDSYRLTEALDKIWE 414
Query: 118 ISNAGNSYMDEHVPWSRFKQGGAASEAAAKDLVIILEAMRIIAVALSPVTPNLCWRIYEQ 177
N Y ++ PW K+G E L LEA+ +A+ PV P+ ++ +
Sbjct: 415 FIADVNKYFNDTKPWILGKEGNM--ERLGTVLYNSLEAVFKVALMTLPVMPDTSEEVFRR 472
Query: 178 LGY----SNEQFGNAAWSDTKWGGLKGGQVMAQPKPVFGRIELK 217
+ + S E N WG LK G + +P+F +I+ K
Sbjct: 473 VSFEEKPSKEHLEN-------WGVLKPGSTVIHGEPLFKKIDAK 509
>sp|Q81W03|SYM1_BACAN Methionine--tRNA ligase 1 OS=Bacillus anthracis GN=metG1 PE=3 SV=1
Length = 660
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 117/225 (52%), Gaps = 19/225 (8%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
M KS GN ++P L+ +G DA+RY+ L+EV FG+DG ++ + F++ +N LAN +GNLL
Sbjct: 311 MSKSKGNVVDPVILIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDLANDLGNLL 370
Query: 61 NRTLGLLKKNCQSTLVVDSAVAAEGTAF--------KDTVEKLVETARGHYENLSLSSAC 112
NRT+ ++ K + A A T F KDT++K+ E EN+ S A
Sbjct: 371 NRTVAMIDKYFNGEI---PAFKANVTEFDETLVTFAKDTLKKVEEAM----ENMEFSVAL 423
Query: 113 EAVLDISNAGNSYMDEHVPWSRFKQGGAASEAAAKDLVIILEAMRIIAVALSPVTPNLCW 172
++ + + N Y+DE PW K E A + + E +R + L P
Sbjct: 424 SSIWQLVSRTNKYIDETQPWVLAKDED-DREKLASVMAHLAEVLRQTGIMLMPFLTVAPS 482
Query: 173 RIYEQLGYSNEQFGNAAW-SDTKWGGLKGGQVMAQPKPVFGRIEL 216
+++ QLG ++E + +W S + G + G + + +P+F R+E+
Sbjct: 483 KMFAQLGLTDE--AHTSWGSLSTIGCIPAGTKVEKGQPIFPRLEM 525
>sp|Q4L3E7|SYM_STAHJ Methionine--tRNA ligase OS=Staphylococcus haemolyticus (strain
JCSC1435) GN=metG PE=3 SV=1
Length = 659
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 125/256 (48%), Gaps = 23/256 (8%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
M KS GN ++PN L+ +G DA RY+ ++E+ FG+DG ++ + F++ N LAN +GNL+
Sbjct: 309 MSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNYDLANDLGNLV 368
Query: 61 NRTLGLLKKNCQSTLVVDSAVAAEGTAFKDTVEKLVETARGHY----ENLSLSSACEAVL 116
NRT+ ++ K Q L A + +E L H+ E+ S A V
Sbjct: 369 NRTISMINKYFQGEL---PAYEGPKHELDEDMEALAHETVKHFNESMESFQFSVALSTVW 425
Query: 117 DISNAGNSYMDEHVPWSRFKQGGAASEAAAKDLV-----IILEAMRIIAVALSPVTPNLC 171
+ N Y+DE PW A + + KD++ ++E +R AV L P +
Sbjct: 426 KFISRTNKYIDETTPWV------LAKDDSQKDMLGNVMAHLVENIRFAAVLLRPFLTHAP 479
Query: 172 WRIYEQLGYSNEQFGNAAWSDTKWGGLKGG-QVMAQPKPVFGRIELKTG---TEDGGEPA 227
I++QL + + S ++G LK V +P P+F R++ + ++ +P
Sbjct: 480 KEIFKQLNINEPELFELE-SLEQYGALKQPIMVTEKPTPIFPRLDTEAEIAYIKESMQPP 538
Query: 228 AAKQVAKKKEKKAKAQ 243
+++ + E+ +KAQ
Sbjct: 539 KSEESKDEVEEPSKAQ 554
>sp|Q8YAF2|SYM_LISMO Methionine--tRNA ligase OS=Listeria monocytogenes serovar 1/2a
(strain ATCC BAA-679 / EGD-e) GN=metG PE=3 SV=1
Length = 664
Score = 108 bits (271), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 111/221 (50%), Gaps = 12/221 (5%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
M KS GN ++P L+ +G DA+RY+ L+EV FG+DG ++ + F+ VN LAN +GNLL
Sbjct: 311 MSKSKGNVVDPYMLIDRYGLDALRYYLLREVPFGSDGLFTPEDFVDRVNFDLANDLGNLL 370
Query: 61 NRTLGLLKKNCQSTLVVDSAVAAEGTAFK----DTVEKLVETARGHYENLSLSSACEAVL 116
NRT+ ++ K + A T F D +V+ G +++ S A +
Sbjct: 371 NRTVAMINKYFDGEI---PAYQGNVTEFDQILVDFKNNVVKEYEGSMDHMQFSVALNQLW 427
Query: 117 DISNAGNSYMDEHVPWSRFKQGGAASEAAAKDLVIILEAMRIIAVALSPVTPNLCWRIYE 176
+ + N Y+DE PW+ K +E A+ + + E +RIIAV L P I+
Sbjct: 428 SLISRTNKYIDETAPWALAKDEDKRTELASV-MTHLAENLRIIAVLLQPFLTRTPGEIFL 486
Query: 177 QLGYSNEQFGNAAW-SDTKWGGLKGG-QVMAQPKPVFGRIE 215
QLG E W S +G + G V+ + P+F R++
Sbjct: 487 QLGLQEENL--KKWDSIYGYGEIPAGTTVVKKGTPIFPRLD 525
>sp|P59952|SYM_MYCBO Methionine--tRNA ligase OS=Mycobacterium bovis (strain ATCC BAA-935
/ AF2122/97) GN=metG PE=3 SV=1
Length = 519
Score = 108 bits (270), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 103/216 (47%), Gaps = 5/216 (2%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
M KS+GN ++P L G D VRYF L+EV FG DG YS++ + +N LAN +GNL
Sbjct: 300 MSKSVGNIVDPVALAEALGVDQVRYFLLREVPFGQDGSYSDEAIVTRINTDLANELGNLA 359
Query: 61 NRTLGLLKKNCQSTLVVDSAVAAEGTAFKDTVEKLVETARGHYENLSLSSACEAVLDISN 120
R+L ++ KN + A A T + L+E RGH++ ++ A EA+ +
Sbjct: 360 QRSLSMVAKNLDGRVPNPGEFADADAALLATADGLLERVRGHFDAQAMHLALEAIWLMLG 419
Query: 121 AGNSYMDEHVPWSRFKQGGAASEAAAK-DLVIILEAMRIIAVALSPVTPNLCWRIYEQLG 179
N Y PW K A +A + L + E +RI A+ + PV P +I + LG
Sbjct: 420 DANKYFSVQQPWVLRKSESEADQARFRTTLYVTCEVVRIAALLIQPVMPESAGKILDLLG 479
Query: 180 YSNEQFGNAAWSDTKWGGLKGGQVMAQPKPVFGRIE 215
+ Q AA L G + P VF R +
Sbjct: 480 QAPNQRSFAAVGVR----LTPGTALPPPTGVFPRYQ 511
>sp|O05593|SYM_MYCTU Methionine--tRNA ligase OS=Mycobacterium tuberculosis GN=metG PE=1
SV=1
Length = 519
Score = 108 bits (270), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 103/216 (47%), Gaps = 5/216 (2%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
M KS+GN ++P L G D VRYF L+EV FG DG YS++ + +N LAN +GNL
Sbjct: 300 MSKSVGNIVDPVALAEALGVDQVRYFLLREVPFGQDGSYSDEAIVTRINTDLANELGNLA 359
Query: 61 NRTLGLLKKNCQSTLVVDSAVAAEGTAFKDTVEKLVETARGHYENLSLSSACEAVLDISN 120
R+L ++ KN + A A T + L+E RGH++ ++ A EA+ +
Sbjct: 360 QRSLSMVAKNLDGRVPNPGEFADADAALLATADGLLERVRGHFDAQAMHLALEAIWLMLG 419
Query: 121 AGNSYMDEHVPWSRFKQGGAASEAAAK-DLVIILEAMRIIAVALSPVTPNLCWRIYEQLG 179
N Y PW K A +A + L + E +RI A+ + PV P +I + LG
Sbjct: 420 DANKYFSVQQPWVLRKSESEADQARFRTTLYVTCEVVRIAALLIQPVMPESAGKILDLLG 479
Query: 180 YSNEQFGNAAWSDTKWGGLKGGQVMAQPKPVFGRIE 215
+ Q AA L G + P VF R +
Sbjct: 480 QAPNQRSFAAVGVR----LTPGTALPPPTGVFPRYQ 511
>sp|Q81JA8|SYM1_BACCR Methionine--tRNA ligase 1 OS=Bacillus cereus (strain ATCC 14579 /
DSM 31) GN=metG1 PE=3 SV=1
Length = 660
Score = 108 bits (269), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 118/230 (51%), Gaps = 19/230 (8%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
M KS GN ++P L+ +G DA+RY+ L+EV FG+DG ++ + F++ +N LAN +GNLL
Sbjct: 311 MSKSKGNVVDPVTLIDRYGLDALRYYLLREVPFGSDGVFTPEGFVERINFDLANDLGNLL 370
Query: 61 NRTLGLLKKNCQSTLVVDSAVAAEGTAF--------KDTVEKLVETARGHYENLSLSSAC 112
NRT+ ++ K + A A T F +DT++K+ E EN+ S A
Sbjct: 371 NRTVAMIDKYFSGEI---PAFKANVTEFDETLVAFAQDTLKKVEEAM----ENMEFSVAL 423
Query: 113 EAVLDISNAGNSYMDEHVPWSRFKQGGAASEAAAKDLVIILEAMRIIAVALSPVTPNLCW 172
++ + + N Y+DE PW K E A + + E +R + L P
Sbjct: 424 GSIWQLVSRTNKYIDETQPWVLAKDEN-DREKLASVMAHLAEVLRQTGIMLMPFLTVAPS 482
Query: 173 RIYEQLGYSNEQFGNAAW-SDTKWGGLKGGQVMAQPKPVFGRIELKTGTE 221
+++ QLG ++E + +W S + G + G + + P+F R+E++ E
Sbjct: 483 KMFAQLGLTDE--AHKSWESLSTIGCIPAGTKVEKGNPIFPRLEMEVEVE 530
>sp|Q899D9|SYM_CLOTE Methionine--tRNA ligase OS=Clostridium tetani (strain Massachusetts
/ E88) GN=metG PE=3 SV=1
Length = 641
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 112/226 (49%), Gaps = 13/226 (5%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
M KS GN ++P LV +FG D VRY+ L+E+ FG+DG ++ + FIK +N+ LAN +GNLL
Sbjct: 299 MSKSKGNVVDPVVLVDHFGEDTVRYYLLREIPFGSDGLFNNELFIKKINSDLANDLGNLL 358
Query: 61 NRTLGLLKKNCQSTLVVDSAVAAEGTAFKDTVEKLVETARGHYEN----LSLSSACEAVL 116
+RT+ +++K ++ + +A E D + L R EN L + + +
Sbjct: 359 SRTVAMVQKYFNG--IMPAPIAKE--PIDDELINLALDTREKVENNMEKLKIPEVLDEIW 414
Query: 117 DISNAGNSYMDEHVPWSRFKQGGAASEAAAKDLVIILEAMRIIAVALSPVTPNLCWRIYE 176
+ N Y+DE PW K L + E +RII+V +S P RI E
Sbjct: 415 TLIGRANKYIDETTPWILAKDEDKKDRLGTV-LYNLSETLRIISVLISAFIPKTSERINE 473
Query: 177 QLGYSNEQFGNAAWSDTKWGGLKGGQVMAQPKPVFGRIELKTGTED 222
QL + + A D G K G + + +F RI+++ E+
Sbjct: 474 QLNVDLTTWDSIASFD----GTKAGTKVVKGDALFPRIDVEAKIEE 515
>sp|Q92GS6|SYM_RICCN Methionine--tRNA ligase OS=Rickettsia conorii (strain ATCC VR-613 /
Malish 7) GN=metG PE=3 SV=1
Length = 508
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 112/223 (50%), Gaps = 18/223 (8%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
+ KSLGNT++P +L+ FG D VRYF ++EV FG DG+++ I +N+ L+N IGNLL
Sbjct: 296 ISKSLGNTIDPIKLIDEFGVDQVRYFLMREVTFGADGNFARSNLITRINSELSNKIGNLL 355
Query: 61 NRTLGLLKKNCQSTL------VVDSAVAAEGTAFKDTVEKLVETARGHYENLSLSSACEA 114
RT + KN + + V+D E K T K VE + ++ E
Sbjct: 356 QRTTSFVYKNNDAKVPLLTQGVIDKIY--ELPILK-TASKFVEQNILLMDKTEINKILEN 412
Query: 115 VLDISNAGNSYMDEHVPWSRFKQGGAASEAAAKDLVIILEAMRIIAVALSPVTPNLCWRI 174
+++++ N Y+D PW+ K + + L +LE +R IA+ L P P+ ++
Sbjct: 413 IINLAEEANIYIDSEAPWNLKKTD---PDKMLEVLYALLEVLRYIAIMLLPFIPSSANKM 469
Query: 175 YEQLGYSNEQ--FGNAAWSDTKWGGLKGGQVMAQPKPVFGRIE 215
+QLG + E+ F + T L G + +P +F + E
Sbjct: 470 LDQLGVNKEERLFKHLIRDYT----LTAGSNILEPTIIFPKFE 508
>sp|Q49UZ9|SYM_STAS1 Methionine--tRNA ligase OS=Staphylococcus saprophyticus subsp.
saprophyticus (strain ATCC 15305 / DSM 20229) GN=metG
PE=3 SV=1
Length = 658
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 112/219 (51%), Gaps = 8/219 (3%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
M KS GN ++PN L++ +G DA RY+ ++E+ FG+DG ++ + F++ N LAN +GNL+
Sbjct: 309 MSKSKGNVVDPNVLINRYGLDATRYYLMRELPFGSDGVFTPEGFVERTNYDLANDLGNLV 368
Query: 61 NRTLGLLKKNCQSTLVVDSAVAAEGTAFKDTVEKLVETARGHYEN---LSLSSACEAVLD 117
NRT+ ++ K L E KD + ++T + +EN L S A +
Sbjct: 369 NRTISMVNKYFDGELPAYQGPKHELD--KDMEQMALDTVKTFHENMDDLQFSVALSTIWK 426
Query: 118 ISNAGNSYMDEHVPWSRFKQGGAASEAAAKDLVIILEAMRIIAVALSPVTPNLCWRIYEQ 177
+ N Y+DE PW K E + ++E +RIIAV L P + +I+ Q
Sbjct: 427 FISRTNKYIDETSPWVLAKDED-QKEMLGNVMAHLVENIRIIAVLLRPFLTHAPKQIFSQ 485
Query: 178 LGYSNEQFGNAAWSDTKWGGL-KGGQVMAQPKPVFGRIE 215
L + + S ++G L + V +P+P+F R++
Sbjct: 486 LNINAPELFELE-SIEQYGALTEPIMVSGKPEPIFPRLD 523
>sp|Q97EW5|SYM_CLOAB Methionine--tRNA ligase OS=Clostridium acetobutylicum (strain ATCC
824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)
GN=metG PE=3 SV=1
Length = 644
Score = 104 bits (260), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 118/243 (48%), Gaps = 5/243 (2%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
M KS GN ++P L++ FG+D VRY+ L E+ FG+DG ++ + FIK +N+ LAN +GNL+
Sbjct: 300 MSKSKGNVVDPVVLINEFGTDPVRYYLLHEIPFGSDGLFNNEIFIKKINSDLANDLGNLV 359
Query: 61 NRTLGLLKKNCQSTLVVDSAVAAEGTAFKDTVEKLVETARGHYENLSLSSACEAVLDISN 120
+RT +++K ++ D L E + L + A + + D+
Sbjct: 360 SRTAAMIEKYFDGSIQPPVDKEEIDNELIDMAISLPEKLDEDIKKLKIPEALDHIWDLIK 419
Query: 121 AGNSYMDEHVPWSRFKQGGAASEAAAKDLVIILEAMRIIAVALSPVTPNLCWRIYEQLGY 180
N Y+DE PW K + L ++E++R +A L+P P +I QL
Sbjct: 420 RANKYIDETTPWVLAKDENKKARLGTV-LYNLVESLRFVATTLTPFLPETGEKIKTQLNI 478
Query: 181 SNEQFGNAAWSDTKWGGLKGGQVMAQPKPVFGRIELKTGTEDGGEPAAAKQVAKKKEKKA 240
+ + + + D G + G +++ + +F RI++ E+ + + A +K +
Sbjct: 479 ELDTWESLSAFD----GTRAGTKVSKGEVIFPRIDVDKKIEELNKLKEEQLKATRKMQPL 534
Query: 241 KAQ 243
K +
Sbjct: 535 KPE 537
>sp|Q8P298|SYM_STRP8 Methionine--tRNA ligase OS=Streptococcus pyogenes serotype M18
(strain MGAS8232) GN=metG PE=3 SV=1
Length = 665
Score = 104 bits (259), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 110/222 (49%), Gaps = 13/222 (5%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
M KS GN + P LV FG D +RY+ ++ + G+DG ++ + ++ +N LAN +GNLL
Sbjct: 309 MSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELANDLGNLL 368
Query: 61 NRTLGLLKKNCQSTLVVDSAVAAEGTAFKDTVEKLVETA----RGHYENLSLSSACEAVL 116
NRT+ ++ K T+ A GTAF + +L++ H E + A EAV
Sbjct: 369 NRTVAMINKYFDGTV---PAYVDNGTAFDADLSQLIDAQLADYHKHMEAVDYPRALEAVW 425
Query: 117 DISNAGNSYMDEHVPWSRFKQGGAASEAAAKDLVIILEAMRIIAVALSPVTPNLCWRIYE 176
I N Y+DE PW K+ G ++ A+ + + ++R++A + P I
Sbjct: 426 TIIARTNKYIDETAPWVLAKEDGDKAQLASV-MAHLAASLRVVAHVIQPFMMETSAAIMA 484
Query: 177 QLGYSN-EQFGNAAWSDTKWGGLKGGQVMAQPKPVFGRIELK 217
QLG + A +D +V+A+ P+F R++++
Sbjct: 485 QLGLAPVSDLSTLALADFP----ANTKVVAKGTPIFPRLDME 522
>sp|Q5XDK8|SYM_STRP6 Methionine--tRNA ligase OS=Streptococcus pyogenes serotype M6
(strain ATCC BAA-946 / MGAS10394) GN=metG PE=3 SV=2
Length = 665
Score = 104 bits (259), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 110/222 (49%), Gaps = 13/222 (5%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
M KS GN + P LV FG D +RY+ ++ + G+DG ++ + ++ +N LAN +GNLL
Sbjct: 309 MSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELANDLGNLL 368
Query: 61 NRTLGLLKKNCQSTLVVDSAVAAEGTAFKDTVEKLVETA----RGHYENLSLSSACEAVL 116
NRT+ ++ K T+ A GTAF + +L++ H E + A EAV
Sbjct: 369 NRTVAMINKYFDGTV---PAYVDNGTAFDADLSQLIDAQLADYHKHMEAVDYPRALEAVW 425
Query: 117 DISNAGNSYMDEHVPWSRFKQGGAASEAAAKDLVIILEAMRIIAVALSPVTPNLCWRIYE 176
I N Y+DE PW K+ G ++ A+ + + ++R++A + P I
Sbjct: 426 TIIARTNKYIDETAPWVLAKEDGDKAQLASV-MAHLAASLRVVAHVIQPFMMETSAAIMA 484
Query: 177 QLGYSN-EQFGNAAWSDTKWGGLKGGQVMAQPKPVFGRIELK 217
QLG + A +D +V+A+ P+F R++++
Sbjct: 485 QLGLAPVSDLSTLALADFP----ANTKVVAKGTPIFPRLDME 522
>sp|Q9A178|SYM_STRP1 Methionine--tRNA ligase OS=Streptococcus pyogenes serotype M1
GN=metG PE=3 SV=2
Length = 665
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 109/222 (49%), Gaps = 13/222 (5%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
M KS GN + P LV FG D +RY+ ++ + G+DG ++ + ++ +N LAN +GNLL
Sbjct: 309 MSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELANDLGNLL 368
Query: 61 NRTLGLLKKNCQSTLVVDSAVAAEGTAFKDTVEKLVETA----RGHYENLSLSSACEAVL 116
NRT+ ++ K T+ A GTAF + +L++ H E + A EAV
Sbjct: 369 NRTVAMINKYFDGTV---PAYVDNGTAFDADLSQLIDAQLADYHKHMEAVDYPRALEAVW 425
Query: 117 DISNAGNSYMDEHVPWSRFKQGGAASEAAAKDLVIILEAMRIIAVALSPVTPNLCWRIYE 176
I N Y+DE PW K+ G ++ A+ + + ++R++A + P I
Sbjct: 426 TIIARTNKYIDETAPWVLAKEDGDKAQLASV-MAHLAASLRLVAHVIQPFMMETSAAIMA 484
Query: 177 QLGYSN-EQFGNAAWSDTKWGGLKGGQVMAQPKPVFGRIELK 217
QLG A +D +V+A+ P+F R++++
Sbjct: 485 QLGLEPVSDLSTLALADFP----ANTKVVAKGTPIFPRLDME 522
>sp|P0DG49|SYM_STRPQ Methionine--tRNA ligase OS=Streptococcus pyogenes serotype M3
(strain SSI-1) GN=metG PE=3 SV=1
Length = 665
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 110/222 (49%), Gaps = 13/222 (5%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
M KS GN + P LV FG D +RY+ ++ + G+DG ++ + ++ +N LAN +GNLL
Sbjct: 309 MSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELANDLGNLL 368
Query: 61 NRTLGLLKKNCQSTLVVDSAVAAEGTAFKDTVEKLVETA----RGHYENLSLSSACEAVL 116
NRT+ ++ K T+ A GTAF + ++++ H E + A EAV
Sbjct: 369 NRTVAMINKYFDGTV---PAYVDNGTAFDADLSQVIDAQLADYHKHMEAVDYPRALEAVW 425
Query: 117 DISNAGNSYMDEHVPWSRFKQGGAASEAAAKDLVIILEAMRIIAVALSPVTPNLCWRIYE 176
I N Y+DE PW K+ G ++ A+ + + ++R++A + P I
Sbjct: 426 TIIARTNKYIDETAPWVLAKEDGDKAQLASV-MAHLAASLRVVAHVIQPFMMETSAAIMA 484
Query: 177 QLGYSN-EQFGNAAWSDTKWGGLKGGQVMAQPKPVFGRIELK 217
QLG + A +D +V+A+ P+F R++++
Sbjct: 485 QLGLAPVSDLSTLALADFP----ANTKVVAKGTPIFPRLDME 522
>sp|P0DG48|SYM_STRP3 Methionine--tRNA ligase OS=Streptococcus pyogenes serotype M3
(strain ATCC BAA-595 / MGAS315) GN=metG PE=3 SV=1
Length = 665
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 110/222 (49%), Gaps = 13/222 (5%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
M KS GN + P LV FG D +RY+ ++ + G+DG ++ + ++ +N LAN +GNLL
Sbjct: 309 MSKSKGNVVYPEMLVERFGLDPLRYYLMRSLPVGSDGTFTPEDYVGRINYELANDLGNLL 368
Query: 61 NRTLGLLKKNCQSTLVVDSAVAAEGTAFKDTVEKLVETA----RGHYENLSLSSACEAVL 116
NRT+ ++ K T+ A GTAF + ++++ H E + A EAV
Sbjct: 369 NRTVAMINKYFDGTV---PAYVDNGTAFDADLSQVIDAQLADYHKHMEAVDYPRALEAVW 425
Query: 117 DISNAGNSYMDEHVPWSRFKQGGAASEAAAKDLVIILEAMRIIAVALSPVTPNLCWRIYE 176
I N Y+DE PW K+ G ++ A+ + + ++R++A + P I
Sbjct: 426 TIIARTNKYIDETAPWVLAKEDGDKAQLASV-MAHLAASLRVVAHVIQPFMMETSAAIMA 484
Query: 177 QLGYSN-EQFGNAAWSDTKWGGLKGGQVMAQPKPVFGRIELK 217
QLG + A +D +V+A+ P+F R++++
Sbjct: 485 QLGLAPVSDLSTLALADFP----ANTKVVAKGTPIFPRLDME 522
>sp|Q9RUF3|SYM_DEIRA Methionine--tRNA ligase OS=Deinococcus radiodurans (strain ATCC
13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 /
NCIMB 9279 / R1 / VKM B-1422) GN=metG PE=3 SV=1
Length = 681
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 120/265 (45%), Gaps = 28/265 (10%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
MGKSLGN ++P ELV + DA+RY L+E G D + E + +N+ LAN +GNLL
Sbjct: 317 MGKSLGNAIDPEELVAAWPVDAIRYALLREASLGADSPFGEGVLVSRLNSDLANDLGNLL 376
Query: 61 NRTLGLLKKNCQSTLVV-------DSAVAAEGTAFKDTVEKLVETARGHYENLSLSSACE 113
+RT+ +++K + + + A A D V +LV + L ++ A +
Sbjct: 377 SRTVSMIQKYRGGVIPAATEPTDREREIEAAARALPDEVLRLV-------DELKINMAID 429
Query: 114 AVLDISNAGNSYMDEHVPWSRFKQGGAASEAAAKDLVIIL--EAMRIIAVALSPVTPNLC 171
A + N Y+ E PW+ K + D V+ E +R+ +VAL V P
Sbjct: 430 AAMSFVRDLNRYIAESTPWTLAK---SPETQGRLDTVLYTAAEGLRVASVALEAVIPTKA 486
Query: 172 WRIYEQLGYSNEQFG-NAAWSDTKWGGLKGGQVMAQPKPVFGRIELKTGTEDGGEPAAAK 230
+ EQLG + + AAW T G G + PKP E K +P A K
Sbjct: 487 KELREQLGLGRQGYPLQAAWGLTPAGTRVQGGAILFPKPEPKADETKNAEAKPPKPQAKK 546
Query: 231 Q--------VAKKKEKKAKAQAVAE 247
+ AK E+K +A A A+
Sbjct: 547 EKKTVTDTAPAKTTEQKPEAAAPAQ 571
>sp|Q9CHE0|SYM_LACLA Methionine--tRNA ligase OS=Lactococcus lactis subsp. lactis (strain
IL1403) GN=metG PE=3 SV=1
Length = 662
Score = 102 bits (254), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 111/227 (48%), Gaps = 24/227 (10%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
M KS GN + P L+ +G DAVRY+ ++ + FG DG ++ + F+ +N LAN +GNLL
Sbjct: 309 MSKSKGNVVYPEMLIERYGLDAVRYYLMRAISFGQDGIFTPEDFVGRINFDLANDLGNLL 368
Query: 61 NRTLGLLKKNCQSTLVVDSAVAAEG--TAFKDTVEKLVETARGHY----ENLSLSSACEA 114
NRT+ ++ K D + A G T F ++E++VE H+ + + A
Sbjct: 369 NRTVSMINKYN------DGKIEATGVSTEFDASLEEVVEETISHFHKAMDKFEFNVALAD 422
Query: 115 VLDISNAGNSYMDEHVPWSRFKQGGAASEAAAKDLVIIL----EAMRIIAVALSPVTPNL 170
V + + N Y+DE PW A SE L +L E +RI L P
Sbjct: 423 VWTLISRTNKYIDETAPWVL-----AKSEDDKAKLNNVLYHLAENLRIAGALLQPFMRAT 477
Query: 171 CWRIYEQLGYSNEQFGNAAWSDTKWGGLKGGQVMAQPKPVFGRIELK 217
+I+EQLG F + + +G V+A+ +P+F R++++
Sbjct: 478 SGKIFEQLGMDERSF---SLENLSFGYSFTHPVVAKGQPIFPRLDVE 521
>sp|Q98MV8|SYM_RHILO Methionine--tRNA ligase OS=Rhizobium loti (strain MAFF303099)
GN=metG PE=3 SV=1
Length = 516
Score = 102 bits (253), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 80/168 (47%), Gaps = 3/168 (1%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
M KS+GN ++P L+ ++G D VRYFFL+EV FG DG YS D + NA LAN +GNL
Sbjct: 300 MSKSVGNVVDPFALIEHYGLDQVRYFFLREVPFGQDGSYSHDAIVNRTNADLANGLGNLA 359
Query: 61 NRTLGLLKKNCQSTLVVDSAVAAEGTAFKDTVEKLVETARGHYENLSLSSACEAVLDISN 120
R+L ++ KNC + + +A D + TAR + A A+ D+
Sbjct: 360 QRSLSMIAKNCGGVVPKRGEMTDADSAILDQAVAALTTARKAMAGQGIHLALAAIFDVVA 419
Query: 121 AGNSYMDEHVPWSRFKQGGAASEAAAKDLVIILEAMRIIAVALSPVTP 168
+ Y PW+ K E L E +R +AV P P
Sbjct: 420 EADRYFAGQAPWALKKTDPERMETV---LWTTAELVRRVAVLCQPFIP 464
>sp|Q8XHG1|SYM_CLOPE Methionine--tRNA ligase OS=Clostridium perfringens (strain 13 /
Type A) GN=metG PE=3 SV=1
Length = 645
Score = 101 bits (251), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 114/237 (48%), Gaps = 17/237 (7%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
M KS GN ++P LV+ FG+DAVRY+ L+E+ FG+DG ++ + FIK VN LAN +GNLL
Sbjct: 299 MSKSKGNVVDPVVLVNMFGADAVRYYLLREIPFGSDGLFNNEIFIKKVNTDLANDLGNLL 358
Query: 61 NRTLGLLKKNCQSTLVVDSAVAAEGTAFKDTVEKLVETARGHYE----NLSLSSACEAVL 116
+RT+ ++ K V+ + E D + L + G E L + A E++
Sbjct: 359 SRTIAMVYKYFGG--VIQAPTCKE--PIDDELINLALSTPGKVEASIDALKIPEALESIW 414
Query: 117 DISNAGNSYMDEHVPWSRFKQGGAASEAAAKDLVIILEAMRIIAVALSPVTPNLCWRIYE 176
+ + N Y+DE PW + E L +LE +R ++V +SP +I
Sbjct: 415 TLISRANKYIDETTPWI-LAKDEEKKERLGTVLYNLLETLRFVSVMISPFLTETSVKINA 473
Query: 177 QLGYSNEQFGNAAWSDTK-WGGLKGGQVMAQPKPVFGRIEL--KTGTEDGGEPAAAK 230
QL W K + G G + + +F RI++ K + +PA K
Sbjct: 474 QLNTK-----VTTWESLKEFNGTVAGDKVVKGDVIFPRIDVEEKLAELEALKPAPVK 525
>sp|O67298|SYM_AQUAE Methionine--tRNA ligase OS=Aquifex aeolicus (strain VF5) GN=metG
PE=1 SV=1
Length = 497
Score = 101 bits (251), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 87/169 (51%), Gaps = 7/169 (4%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
M K+LGN ++P E+V +G D VRYF L+EV FG DGD+S+ + +N LAN IGNL
Sbjct: 296 MSKTLGNVVDPYEVVQEYGLDEVRYFLLREVPFGQDGDFSKKAILNRINGELANEIGNLY 355
Query: 61 NRTLGLLKKNCQSTLVVDSAVAAEGTAFKDTVEKLVETARGHYENLSLSSACEAVLDISN 120
+R + N + A + ++ ++ + E ++ A E +L ++
Sbjct: 356 SRVV-----NMAHKFLGGEVSGARDEEYAKIAQESIKNYENYMEKVNFYKAIEEILKFTS 410
Query: 121 AGNSYMDEHVPWSRFKQGGAASEAAAKDLVIILEAMRIIAVALSPVTPN 169
N Y+DE PW+ K+ E K L +++ + ++ L P+TPN
Sbjct: 411 YLNKYVDEKQPWALNKE--RKKEELQKVLYALVDGLFVLTHLLYPITPN 457
>sp|Q1RJZ5|SYM_RICBR Methionine--tRNA ligase OS=Rickettsia bellii (strain RML369-C)
GN=metG PE=3 SV=1
Length = 509
Score = 101 bits (251), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 12/220 (5%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
+ KSLGNT++P +L+ FG D VRYF ++E+ FG DG+++ I +N+ L+N IGNLL
Sbjct: 296 ISKSLGNTIDPIKLIEEFGVDQVRYFLMREITFGADGNFARSNLITRINSELSNKIGNLL 355
Query: 61 NRTLGLLKKNCQSTLVVDSAVAAEGTAFKDTVEKLVETARGH---YENLSLSSACEAVLD 117
RT + KN + + A ++ + +A+ + E ++ + +++
Sbjct: 356 QRTTSFVYKNNDGKVPAITQDAINKIYELPLLKTAINSAKQNILLMEKTEINKILDNIIN 415
Query: 118 ISNAGNSYMDEHVPWSRFKQGGAASEAAAKDLVIILEAMRIIAVALSPVTPNLCWRIYEQ 177
++ N Y+D PW+ K E + L +LE +R IAV L P+ ++ +Q
Sbjct: 416 LAEEANIYIDSEAPWNLKKTD---PEKMLEVLYALLETLRYIAVMLQAFMPSSAGKMLDQ 472
Query: 178 LGYSNEQ--FGNAAWSDTKWGGLKGGQVMAQPKPVFGRIE 215
LG + E+ F + + L + +P VF R E
Sbjct: 473 LGVNTEERLFKHLSLE----FALTSASDILEPVIVFPRFE 508
>sp|Q8CQU3|SYM_STAES Methionine--tRNA ligase OS=Staphylococcus epidermidis (strain ATCC
12228) GN=metG PE=3 SV=1
Length = 656
Score = 100 bits (250), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 113/240 (47%), Gaps = 14/240 (5%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
M KS GN ++PN L+ +G DA RY+ ++E+ FG+DG ++ + F++ N LAN +GNL+
Sbjct: 309 MSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNYDLANDLGNLV 368
Query: 61 NRTLGLLKKNCQSTLVVDSAVAAEGTAFKDTVEKL----VETARGHYENLSLSSACEAVL 116
NRT+ ++ K L A + +E + V++ + E+L S A V
Sbjct: 369 NRTISMINKYFHGEL---PAYQGPKHELDEKMEAMALETVKSFNDNMESLQFSVALSTVW 425
Query: 117 DISNAGNSYMDEHVPWSRFKQGGAASEAAAKDLVIILEAMRIIAVALSPVTPNLCWRIYE 176
+ N Y+DE PW K E + ++E +R + L P + I++
Sbjct: 426 KFISRTNKYIDETQPWVLAKDEN-QREMLGNVMAHLVENIRFATILLQPFLTHAPREIFK 484
Query: 177 QLGYSNEQFGNAAWSDTKWGGL-KGGQVMAQPKPVFGRI----ELKTGTEDGGEPAAAKQ 231
QL +N S ++G L + V +P P+F R+ E+ E P + KQ
Sbjct: 485 QLNINNPDLHQLD-SLQQYGMLSEAITVTEKPTPIFPRLDTEAEIAYIKESMQPPKSIKQ 543
>sp|Q5HRR5|SYM_STAEQ Methionine--tRNA ligase OS=Staphylococcus epidermidis (strain ATCC
35984 / RP62A) GN=metG PE=3 SV=1
Length = 656
Score = 100 bits (250), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 113/240 (47%), Gaps = 14/240 (5%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
M KS GN ++PN L+ +G DA RY+ ++E+ FG+DG ++ + F++ N LAN +GNL+
Sbjct: 309 MSKSKGNVVDPNVLIDRYGLDATRYYLMRELPFGSDGVFTPEAFVERTNYDLANDLGNLV 368
Query: 61 NRTLGLLKKNCQSTLVVDSAVAAEGTAFKDTVEKL----VETARGHYENLSLSSACEAVL 116
NRT+ ++ K L A + +E + V++ + E+L S A V
Sbjct: 369 NRTISMINKYFHGEL---PAYQGPKHELDEKMEAMALETVKSFNDNMESLQFSVALSTVW 425
Query: 117 DISNAGNSYMDEHVPWSRFKQGGAASEAAAKDLVIILEAMRIIAVALSPVTPNLCWRIYE 176
+ N Y+DE PW K E + ++E +R + L P + I++
Sbjct: 426 KFISRTNKYIDETQPWVLAKDEN-QREMLGNVMAHLVENIRFATILLQPFLTHAPREIFK 484
Query: 177 QLGYSNEQFGNAAWSDTKWGGL-KGGQVMAQPKPVFGRI----ELKTGTEDGGEPAAAKQ 231
QL +N S ++G L + V +P P+F R+ E+ E P + KQ
Sbjct: 485 QLNINNPDLHQLD-SLQQYGMLSEAITVTEKPTPIFPRLDTEAEIAYIKESMQPPKSIKQ 543
>sp|Q9ZCP0|SYM_RICPR Methionine--tRNA ligase OS=Rickettsia prowazekii (strain Madrid E)
GN=metG PE=3 SV=1
Length = 508
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 22/224 (9%)
Query: 1 MGKSLGNTLEPNELVHNFGSDAVRYFFLKEVEFGNDGDYSEDRFIKIVNAHLANTIGNLL 60
+ KSLGNT++P L+ FG D VRYF ++EV FG D +++ + I +N+ L+N IGNLL
Sbjct: 296 ISKSLGNTIDPITLIDEFGVDQVRYFLMREVIFGADANFARNNLITRINSELSNKIGNLL 355
Query: 61 NRTLGLLKKNCQSTL------VVDSA--VAAEGTAFKDTVEKLVETARGHYENLSLSSAC 112
+R + + KN + + V+D + TA K E ++ + ++
Sbjct: 356 HRIVSFVYKNNDAKVPLIKSGVIDKIYELPILKTAIKFAQENILLMDKT-----EINKIL 410
Query: 113 EAVLDISNAGNSYMDEHVPWSRFKQGGAASEAAAKDLVIILEAMRIIAVALSPVTPNLCW 172
E +++++ N Y+ PW+ + + L +LE +R IA+ L P PN
Sbjct: 411 ENIINLAEDANIYITNEAPWN---LKTTDPDKMLEVLYSLLEVLRYIAIMLQPFVPNSAN 467
Query: 173 RIYEQLGYSNEQ--FGNAAWSDTKWGGLKGGQVMAQPKPVFGRI 214
++ +QLG S E+ F + + LK G + +P +F +
Sbjct: 468 KMLDQLGVSKEERLFKHLV----RDHALKAGSNILEPSIIFPKF 507
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.130 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,632,912
Number of Sequences: 539616
Number of extensions: 3759288
Number of successful extensions: 11516
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 708
Number of HSP's that attempted gapping in prelim test: 9986
Number of HSP's gapped (non-prelim): 1602
length of query: 248
length of database: 191,569,459
effective HSP length: 114
effective length of query: 134
effective length of database: 130,053,235
effective search space: 17427133490
effective search space used: 17427133490
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)