Query 039619
Match_columns 459
No_of_seqs 553 out of 2953
Neff 9.3
Searched_HMMs 13730
Date Mon Mar 25 19:51:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039619.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/039619hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2omza2 c.10.2.1 (A:33-416) In 99.7 3.9E-15 2.8E-19 144.6 21.7 169 152-342 194-362 (384)
2 d1ogqa_ c.10.2.8 (A:) Polygala 99.6 1.4E-16 9.9E-21 151.2 10.4 238 90-344 51-304 (313)
3 d2omza2 c.10.2.1 (A:33-416) In 99.6 4.6E-15 3.4E-19 144.0 18.7 270 23-340 42-382 (384)
4 d1xkua_ c.10.2.7 (A:) Decorin 99.6 2.6E-14 1.9E-18 134.6 21.7 234 86-342 28-283 (305)
5 d1p9ag_ c.10.2.7 (G:) von Will 99.6 1.5E-14 1.1E-18 133.6 18.4 181 120-342 21-206 (266)
6 d1p9ag_ c.10.2.7 (G:) von Will 99.6 4.2E-14 3.1E-18 130.6 17.0 171 110-318 33-205 (266)
7 d1ozna_ c.10.2.7 (A:) Reticulo 99.5 1.1E-13 7.7E-18 129.0 19.2 205 120-342 22-236 (284)
8 d1ozna_ c.10.2.7 (A:) Reticulo 99.5 2E-13 1.5E-17 127.1 19.3 195 110-319 34-236 (284)
9 d1ogqa_ c.10.2.8 (A:) Polygala 99.5 4.3E-14 3.2E-18 133.6 14.5 220 110-342 52-279 (313)
10 d1jl5a_ c.10.2.6 (A:) Leucine 99.5 9.8E-13 7.2E-17 125.4 23.7 223 88-345 77-337 (353)
11 d1jl5a_ c.10.2.6 (A:) Leucine 99.5 1.4E-12 1E-16 124.2 21.8 54 306-371 282-335 (353)
12 d1h6ua2 c.10.2.1 (A:36-262) In 99.5 1.9E-13 1.4E-17 122.9 14.3 145 176-339 81-225 (227)
13 d1xkua_ c.10.2.7 (A:) Decorin 99.5 4.1E-12 3E-16 119.2 23.8 190 110-319 81-283 (305)
14 d1h6ta2 c.10.2.1 (A:31-240) In 99.5 1.6E-13 1.2E-17 121.9 12.1 163 156-339 46-208 (210)
15 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.5 1.4E-12 9.9E-17 118.2 18.5 207 113-338 13-229 (242)
16 d1h6ta2 c.10.2.1 (A:31-240) In 99.4 2.4E-13 1.8E-17 120.7 12.0 162 110-317 48-209 (210)
17 d2omxa2 c.10.2.1 (A:37-235) In 99.4 3.1E-13 2.3E-17 118.9 12.6 160 156-336 40-199 (199)
18 d1h6ua2 c.10.2.1 (A:36-262) In 99.4 6.1E-13 4.5E-17 119.5 14.0 184 110-317 43-226 (227)
19 d2omxa2 c.10.2.1 (A:37-235) In 99.4 7.4E-13 5.4E-17 116.5 13.2 159 133-313 41-199 (199)
20 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.4 9.1E-12 6.6E-16 112.6 18.5 198 110-325 31-239 (242)
21 d2astb2 c.10.1.3 (B:2136-2419) 99.4 1E-14 7.6E-19 136.1 -1.6 177 132-318 46-235 (284)
22 d2astb2 c.10.1.3 (B:2136-2419) 99.3 1.4E-13 1E-17 128.2 -0.8 177 156-341 46-235 (284)
23 d1dcea3 c.10.2.2 (A:444-567) R 98.9 8E-10 5.8E-14 88.7 6.8 73 136-213 2-74 (124)
24 d1dcea3 c.10.2.2 (A:444-567) R 98.9 3.4E-09 2.5E-13 84.9 9.9 95 112-213 2-99 (124)
25 d1w8aa_ c.10.2.7 (A:) Slit {Fr 98.9 4.8E-09 3.5E-13 90.9 11.1 107 225-342 27-137 (192)
26 d1a9na_ c.10.2.4 (A:) Spliceso 98.8 8.4E-10 6.1E-14 93.0 4.1 80 252-339 60-147 (162)
27 d1w8aa_ c.10.2.7 (A:) Slit {Fr 98.8 2.2E-08 1.6E-12 86.6 12.2 122 159-318 11-136 (192)
28 d1a9na_ c.10.2.4 (A:) Spliceso 98.8 3.1E-09 2.2E-13 89.5 6.1 100 110-214 20-122 (162)
29 d1m9la_ c.10.3.1 (A:) Outer ar 98.5 1.5E-10 1.1E-14 101.2 -9.7 69 169-240 37-106 (198)
30 d1m9la_ c.10.3.1 (A:) Outer ar 98.4 1.5E-09 1.1E-13 94.7 -6.9 31 133-165 49-79 (198)
31 d2ifga3 c.10.2.7 (A:36-191) Hi 98.4 7.5E-07 5.5E-11 73.9 9.5 27 195-221 22-48 (156)
32 d2ifga3 c.10.2.7 (A:36-191) Hi 98.3 1.4E-06 1E-10 72.1 9.6 86 250-342 26-114 (156)
33 d2ca6a1 c.10.1.2 (A:2-345) Rna 97.2 9.6E-06 7E-10 76.0 -2.7 13 306-318 241-253 (344)
34 d2ca6a1 c.10.1.2 (A:2-345) Rna 96.8 3.9E-05 2.8E-09 71.7 -2.6 217 110-342 33-313 (344)
35 d1koha1 c.10.2.3 (A:201-362) m 95.6 0.00014 1E-08 60.0 -5.1 34 179-213 64-100 (162)
36 d1z7xw1 c.10.1.1 (W:1-460) Rib 95.6 0.0012 9E-08 62.9 0.8 104 133-241 3-126 (460)
37 d1z7xw1 c.10.1.1 (W:1-460) Rib 95.3 0.0036 2.6E-07 59.5 3.2 93 90-190 3-122 (460)
38 d1koha1 c.10.2.3 (A:201-362) m 94.4 0.00084 6.1E-08 55.1 -3.7 35 284-319 90-126 (162)
39 d1pgva_ c.10.1.1 (A:) Tropomod 90.2 0.023 1.6E-06 46.3 -0.3 11 254-264 130-140 (167)
40 d1pgva_ c.10.1.1 (A:) Tropomod 86.6 0.13 9.4E-06 41.5 2.0 14 251-264 96-109 (167)
41 d1io0a_ c.10.1.1 (A:) Tropomod 82.0 0.04 2.9E-06 44.6 -3.2 12 253-264 130-141 (166)
42 d1io0a_ c.10.1.1 (A:) Tropomod 80.3 0.12 8.9E-06 41.4 -0.7 80 132-213 17-111 (166)
No 1
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.65 E-value=3.9e-15 Score=144.57 Aligned_cols=169 Identities=20% Similarity=0.192 Sum_probs=106.1
Q ss_pred cccccccceEEeecccCCccccccCCCCCcccEEeeccccCcccCcccCCCCCCccEEeeccCCCCccccCCCCCCCccE
Q 039619 152 GNLSKALKHLYIISCSNLESIAEGLDDNTSLETMEIFICQNLKALPNGLRNLTSLQYLLIQDCPTIGSFTANCFPTNLAS 231 (459)
Q Consensus 152 ~~lp~~L~~L~l~~c~~l~~lp~~l~~l~~L~~L~l~~c~~l~~lp~~l~~l~~L~~L~l~~c~~l~~lp~~~~~~~L~~ 231 (459)
..+ ++++.++++++ .+..++. ...+++|++|+++++ .++.++ .+..+++|+.|++++|. +..++....+++|++
T Consensus 194 ~~l-~~~~~l~l~~n-~i~~~~~-~~~~~~L~~L~l~~n-~l~~~~-~l~~l~~L~~L~l~~n~-l~~~~~~~~~~~L~~ 267 (384)
T d2omza2 194 AKL-TNLESLIATNN-QISDITP-LGILTNLDELSLNGN-QLKDIG-TLASLTNLTDLDLANNQ-ISNLAPLSGLTKLTE 267 (384)
T ss_dssp GGC-TTCSEEECCSS-CCCCCGG-GGGCTTCCEEECCSS-CCCCCG-GGGGCTTCSEEECCSSC-CCCCGGGTTCTTCSE
T ss_pred ccc-cccceeeccCC-ccCCCCc-ccccCCCCEEECCCC-CCCCcc-hhhcccccchhccccCc-cCCCCcccccccCCE
Confidence 445 67777777764 4444432 345677778887776 455553 45677777888777753 555555555677788
Q ss_pred EEEecCcccccccccCCCCCCCCCccCEEEEeCCcCCCceecCCCCCCCccCCCCcceEEeecCCCCCccCCCCCCCCCC
Q 039619 232 VCIDYEKIYKPLILERGPGLHRFTSVRLLTLFGGECCGVVSFPPEKDTGKALPASLKHLSIWNFPNLERISSIENLTSFE 311 (459)
Q Consensus 232 L~l~~~~l~~~~~~~~~~~l~~l~~L~~L~l~~~~c~~l~~l~~~~~~~~~~~~~L~~L~l~~c~~l~~l~~l~~l~~L~ 311 (459)
|+++++.+.... .+..++.++.+.+.. +.+..++.. ..+++++.|++++ ++++.++.+..+++|+
T Consensus 268 L~l~~~~l~~~~------~~~~~~~l~~l~~~~---n~l~~~~~~-----~~~~~l~~L~ls~-n~l~~l~~l~~l~~L~ 332 (384)
T d2omza2 268 LKLGANQISNIS------PLAGLTALTNLELNE---NQLEDISPI-----SNLKNLTYLTLYF-NNISDISPVSSLTKLQ 332 (384)
T ss_dssp EECCSSCCCCCG------GGTTCTTCSEEECCS---SCCSCCGGG-----GGCTTCSEEECCS-SCCSCCGGGGGCTTCC
T ss_pred eeccCcccCCCC------ccccccccccccccc---ccccccccc-----chhcccCeEECCC-CCCCCCcccccCCCCC
Confidence 887776665433 446677777777766 234333322 1556777777776 5666665566677777
Q ss_pred EEeccCCCCCCcCCCCCCCCCcceEEeeCCc
Q 039619 312 SLQLCCCPKLQKFPDNGLPTSLLRLEIYGCP 342 (459)
Q Consensus 312 ~L~l~~c~~l~~lp~~~l~~sL~~L~i~~c~ 342 (459)
+|++++| +++.++.-.-+++|++|++++|.
T Consensus 333 ~L~L~~n-~l~~l~~l~~l~~L~~L~l~~N~ 362 (384)
T d2omza2 333 RLFFANN-KVSDVSSLANLTNINWLSAGHNQ 362 (384)
T ss_dssp EEECCSS-CCCCCGGGGGCTTCCEEECCSSC
T ss_pred EEECCCC-CCCCChhHcCCCCCCEEECCCCc
Confidence 7777776 56666542225677777777663
No 2
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.65 E-value=1.4e-16 Score=151.21 Aligned_cols=238 Identities=13% Similarity=0.105 Sum_probs=165.4
Q ss_pred CcCceEEeCCCCCCCCCccc--------eeEEEEecCCCCc-cccCCccccccCcEEEeecCCCceeec--ccccccccc
Q 039619 90 TLKDPEVLDCPVCYEPLTIP--------VYQLQIIPCPSLT-SLWSKSELPATLENIYVDRCSKLAFLS--LRGNLSKAL 158 (459)
Q Consensus 90 ~L~~L~l~~c~~l~~l~~lp--------L~~L~l~~c~~l~-~lp~~~~~~~~L~~L~l~~c~~l~~l~--~~~~lp~~L 158 (459)
++++|+++++.- .....+| |++|+|++|+.+. .+|+.+..+++|++|+++++ .+..++ ....+ .+|
T Consensus 51 ~v~~L~L~~~~l-~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N-~l~~~~~~~~~~~-~~L 127 (313)
T d1ogqa_ 51 RVNNLDLSGLNL-PKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHT-NVSGAIPDFLSQI-KTL 127 (313)
T ss_dssp CEEEEEEECCCC-SSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEE-CCEEECCGGGGGC-TTC
T ss_pred EEEEEECCCCCC-CCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccc-cccccccccccch-hhh
Confidence 678888887511 1111344 8999998766665 78877777789999999885 455443 23455 788
Q ss_pred ceEEeecccCCccccccCCCCCcccEEeeccccCcccCcccCCCCCCc-cEEeeccCCCCccc-cCCCCCCCccEEEEec
Q 039619 159 KHLYIISCSNLESIAEGLDDNTSLETMEIFICQNLKALPNGLRNLTSL-QYLLIQDCPTIGSF-TANCFPTNLASVCIDY 236 (459)
Q Consensus 159 ~~L~l~~c~~l~~lp~~l~~l~~L~~L~l~~c~~l~~lp~~l~~l~~L-~~L~l~~c~~l~~l-p~~~~~~~L~~L~l~~ 236 (459)
+.++++.+.....+|..+..+++|+.++++++.....+|..+..+.++ +.+.++++ .+... +.......+..+++.+
T Consensus 128 ~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n-~l~~~~~~~~~~l~~~~l~l~~ 206 (313)
T d1ogqa_ 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRN-RLTGKIPPTFANLNLAFVDLSR 206 (313)
T ss_dssp CEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSS-EEEEECCGGGGGCCCSEEECCS
T ss_pred cccccccccccccCchhhccCcccceeeccccccccccccccccccccccccccccc-cccccccccccccccccccccc
Confidence 999998877777778888889999999998886555778777777765 66777654 34333 2221122344677766
Q ss_pred CcccccccccCCCCCCCCCccCEEEEeCCcCCCceecCCCCCCCccCCCCcceEEeecCCCCC-ccC-CCCCCCCCCEEe
Q 039619 237 EKIYKPLILERGPGLHRFTSVRLLTLFGGECCGVVSFPPEKDTGKALPASLKHLSIWNFPNLE-RIS-SIENLTSFESLQ 314 (459)
Q Consensus 237 ~~l~~~~~~~~~~~l~~l~~L~~L~l~~~~c~~l~~l~~~~~~~~~~~~~L~~L~l~~c~~l~-~l~-~l~~l~~L~~L~ 314 (459)
+...... +. .+..+++|+.+++.+ +.....++ .. ..+++|+.|++++ ++++ .+| ++.++++|++|+
T Consensus 207 ~~~~~~~-~~---~~~~~~~l~~l~~~~--~~l~~~~~-~~----~~~~~L~~L~Ls~-N~l~g~iP~~l~~L~~L~~L~ 274 (313)
T d1ogqa_ 207 NMLEGDA-SV---LFGSDKNTQKIHLAK--NSLAFDLG-KV----GLSKNLNGLDLRN-NRIYGTLPQGLTQLKFLHSLN 274 (313)
T ss_dssp SEEEECC-GG---GCCTTSCCSEEECCS--SEECCBGG-GC----CCCTTCCEEECCS-SCCEECCCGGGGGCTTCCEEE
T ss_pred ccccccc-cc---ccccccccccccccc--cccccccc-cc----ccccccccccCcc-CeecccCChHHhCCCCCCEEE
Confidence 5554443 44 567889999999988 43333333 33 2678999999998 6776 788 889999999999
Q ss_pred ccCCCCCC-cCCCCCCCCCcceEEeeCCchh
Q 039619 315 LCCCPKLQ-KFPDNGLPTSLLRLEIYGCPLI 344 (459)
Q Consensus 315 l~~c~~l~-~lp~~~l~~sL~~L~i~~c~~L 344 (459)
++++ +++ .+|..+-+++|+.+++.+++.|
T Consensus 275 Ls~N-~l~g~iP~~~~L~~L~~l~l~~N~~l 304 (313)
T d1ogqa_ 275 VSFN-NLCGEIPQGGNLQRFDVSAYANNKCL 304 (313)
T ss_dssp CCSS-EEEEECCCSTTGGGSCGGGTCSSSEE
T ss_pred CcCC-cccccCCCcccCCCCCHHHhCCCccc
Confidence 9985 455 7887544678888888887654
No 3
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.63 E-value=4.6e-15 Score=143.99 Aligned_cols=270 Identities=16% Similarity=0.159 Sum_probs=136.9
Q ss_pred CCCCCCeEeccCCCccCcccccCCccCCccceeeccccccccccCCCCCCCcccCCCCCCCCCCCCCCcCceEEeCCCCC
Q 039619 23 RFPKRQRSSQQDLDESEYSEEVEEEEFPTVQRQARSQETRAADKGGGSKGNKTADPGKRSNNGPVSVTLKDPEVLDCPVC 102 (459)
Q Consensus 23 ~f~~L~~L~l~~~~~~~~~~~~~~~~~p~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~L~~L~l~~c~~l 102 (459)
.+.+|++|++.++...+ . .++..+++|++|.++++..- . ......++ +|++|++++|+
T Consensus 42 ~l~~l~~L~l~~~~I~~-l--~gl~~L~nL~~L~Ls~N~l~-~---------------l~~l~~L~-~L~~L~L~~n~-- 99 (384)
T d2omza2 42 DLDQVTTLQADRLGIKS-I--DGVEYLNNLTQINFSNNQLT-D---------------ITPLKNLT-KLVDILMNNNQ-- 99 (384)
T ss_dssp HHTTCCEEECCSSCCCC-C--TTGGGCTTCCEEECCSSCCC-C---------------CGGGTTCT-TCCEEECCSSC--
T ss_pred HhCCCCEEECCCCCCCC-c--cccccCCCCCEEeCcCCcCC-C---------------CccccCCc-ccccccccccc--
Confidence 46788888887764422 2 24567888888888876421 0 11123444 88888888863
Q ss_pred CCCCccc-------eeEEEEecCCCCccccCCc-----------------------------------------------
Q 039619 103 YEPLTIP-------VYQLQIIPCPSLTSLWSKS----------------------------------------------- 128 (459)
Q Consensus 103 ~~l~~lp-------L~~L~l~~c~~l~~lp~~~----------------------------------------------- 128 (459)
+..++ |+.|++.++ .++.++...
T Consensus 100 --i~~i~~l~~l~~L~~L~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (384)
T d2omza2 100 --IADITPLANLTNLTGLTLFNN-QITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTT 176 (384)
T ss_dssp --CCCCGGGTTCTTCCEEECCSS-CCCCCGGGTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTT
T ss_pred --ccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccchhhhhccccc
Confidence 33333 888887653 333222111
Q ss_pred -----------------cccccCcEEEeecCCCceeeccccccccccceEEeecccCCccccccCCCCCcccEEeecccc
Q 039619 129 -----------------ELPATLENIYVDRCSKLAFLSLRGNLSKALKHLYIISCSNLESIAEGLDDNTSLETMEIFICQ 191 (459)
Q Consensus 129 -----------------~~~~~L~~L~l~~c~~l~~l~~~~~lp~~L~~L~l~~c~~l~~lp~~l~~l~~L~~L~l~~c~ 191 (459)
..+++++.++++++ .+..++..... ++|++|+++++ .++.++ .+..+++|+.|+++++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~l~~~~~l~l~~n-~i~~~~~~~~~-~~L~~L~l~~n-~l~~~~-~l~~l~~L~~L~l~~n- 251 (384)
T d2omza2 177 LERLDISSNKVSDISVLAKLTNLESLIATNN-QISDITPLGIL-TNLDELSLNGN-QLKDIG-TLASLTNLTDLDLANN- 251 (384)
T ss_dssp CCEEECCSSCCCCCGGGGGCTTCSEEECCSS-CCCCCGGGGGC-TTCCEEECCSS-CCCCCG-GGGGCTTCSEEECCSS-
T ss_pred cccccccccccccccccccccccceeeccCC-ccCCCCccccc-CCCCEEECCCC-CCCCcc-hhhcccccchhccccC-
Confidence 11123444444432 23333322333 55666666554 344443 3445556666666555
Q ss_pred CcccCcccCCCCCCccEEeeccCCCCccccCCCCCCCccEEEEecCcccccccccCCCCCCCCCccCEEEEeCCcCCCce
Q 039619 192 NLKALPNGLRNLTSLQYLLIQDCPTIGSFTANCFPTNLASVCIDYEKIYKPLILERGPGLHRFTSVRLLTLFGGECCGVV 271 (459)
Q Consensus 192 ~l~~lp~~l~~l~~L~~L~l~~c~~l~~lp~~~~~~~L~~L~l~~~~l~~~~~~~~~~~l~~l~~L~~L~l~~~~c~~l~ 271 (459)
.+..++ .+..+++|++|+++++ .+..++.....+.++.+.+..+.+.... .+..+++++.|++++ +.+.
T Consensus 252 ~l~~~~-~~~~~~~L~~L~l~~~-~l~~~~~~~~~~~l~~l~~~~n~l~~~~------~~~~~~~l~~L~ls~---n~l~ 320 (384)
T d2omza2 252 QISNLA-PLSGLTKLTELKLGAN-QISNISPLAGLTALTNLELNENQLEDIS------PISNLKNLTYLTLYF---NNIS 320 (384)
T ss_dssp CCCCCG-GGTTCTTCSEEECCSS-CCCCCGGGTTCTTCSEEECCSSCCSCCG------GGGGCTTCSEEECCS---SCCS
T ss_pred ccCCCC-cccccccCCEeeccCc-ccCCCCcccccccccccccccccccccc------ccchhcccCeEECCC---CCCC
Confidence 333433 2445556666666543 3334433333455555555555544332 344555666666655 2333
Q ss_pred ecCCCCCCCccCCCCcceEEeecCCCCCccCCCCCCCCCCEEeccCCCCCCcCCCCCCCCCcceEEeeC
Q 039619 272 SFPPEKDTGKALPASLKHLSIWNFPNLERISSIENLTSFESLQLCCCPKLQKFPDNGLPTSLLRLEIYG 340 (459)
Q Consensus 272 ~l~~~~~~~~~~~~~L~~L~l~~c~~l~~l~~l~~l~~L~~L~l~~c~~l~~lp~~~l~~sL~~L~i~~ 340 (459)
.++. + ..+++|++|++++ +.++.++.+..+++|++|++++| +++.++.-.-+++|+.|++++
T Consensus 321 ~l~~-l----~~l~~L~~L~L~~-n~l~~l~~l~~l~~L~~L~l~~N-~l~~l~~l~~l~~L~~L~L~~ 382 (384)
T d2omza2 321 DISP-V----SSLTKLQRLFFAN-NKVSDVSSLANLTNINWLSAGHN-QISDLTPLANLTRITQLGLND 382 (384)
T ss_dssp CCGG-G----GGCTTCCEEECCS-SCCCCCGGGGGCTTCCEEECCSS-CCCBCGGGTTCTTCSEEECCC
T ss_pred CCcc-c----ccCCCCCEEECCC-CCCCCChhHcCCCCCCEEECCCC-cCCCChhhccCCCCCEeeCCC
Confidence 3332 1 1445566666665 35555554555566666666553 455544312235555555543
No 4
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.61 E-value=2.6e-14 Score=134.56 Aligned_cols=234 Identities=15% Similarity=0.189 Sum_probs=170.9
Q ss_pred CCCCCcCceEEeCCCCCCCCCccc---------eeEEEEecCCCCccc-cCCccccccCcEEEeecCCCceeeccccccc
Q 039619 86 PVSVTLKDPEVLDCPVCYEPLTIP---------VYQLQIIPCPSLTSL-WSKSELPATLENIYVDRCSKLAFLSLRGNLS 155 (459)
Q Consensus 86 ~lp~~L~~L~l~~c~~l~~l~~lp---------L~~L~l~~c~~l~~l-p~~~~~~~~L~~L~l~~c~~l~~l~~~~~lp 155 (459)
.+|+++++|+++++ .++.+| |++|+++++. +..+ |.....+++|++|+++++ .++.+|.. ..
T Consensus 28 ~l~~~l~~L~Ls~N----~i~~l~~~~f~~l~~L~~L~l~~n~-~~~i~~~~f~~l~~L~~L~l~~n-~l~~l~~~-~~- 99 (305)
T d1xkua_ 28 DLPPDTALLDLQNN----KITEIKDGDFKNLKNLHTLILINNK-ISKISPGAFAPLVKLERLYLSKN-QLKELPEK-MP- 99 (305)
T ss_dssp SCCTTCCEEECCSS----CCCCBCTTTTTTCTTCCEEECCSSC-CCCBCTTTTTTCTTCCEEECCSS-CCSBCCSS-CC-
T ss_pred CCCCCCCEEECcCC----cCCCcChhHhhcccccccccccccc-ccccchhhhhCCCccCEecccCC-ccCcCccc-hh-
Confidence 45778999999995 455444 9999998855 4455 434556679999999885 68888743 23
Q ss_pred cccceEEeecccCCccccc-cCCCCCcccEEeeccccCc--ccCcccCCCCCCccEEeeccCCCCccccCCCCCCCccEE
Q 039619 156 KALKHLYIISCSNLESIAE-GLDDNTSLETMEIFICQNL--KALPNGLRNLTSLQYLLIQDCPTIGSFTANCFPTNLASV 232 (459)
Q Consensus 156 ~~L~~L~l~~c~~l~~lp~-~l~~l~~L~~L~l~~c~~l--~~lp~~l~~l~~L~~L~l~~c~~l~~lp~~~~~~~L~~L 232 (459)
..++.|++.++ .+..++. .+.....+..+....+... ...+..+..+++|+.+++.+| .+..++. ..+++|++|
T Consensus 100 ~~l~~L~~~~n-~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n-~l~~l~~-~~~~~L~~L 176 (305)
T d1xkua_ 100 KTLQELRVHEN-EITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADT-NITTIPQ-GLPPSLTEL 176 (305)
T ss_dssp TTCCEEECCSS-CCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSS-CCCSCCS-SCCTTCSEE
T ss_pred hhhhhhhcccc-chhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccC-CccccCc-ccCCccCEE
Confidence 68888888874 4555532 2445567777777665322 122345667889999999876 4566654 357899999
Q ss_pred EEecCcccccccccCCCCCCCCCccCEEEEeCCcCCCceecCCCCCCCccCCCCcceEEeecCCCCCccC-CCCCCCCCC
Q 039619 233 CIDYEKIYKPLILERGPGLHRFTSVRLLTLFGGECCGVVSFPPEKDTGKALPASLKHLSIWNFPNLERIS-SIENLTSFE 311 (459)
Q Consensus 233 ~l~~~~l~~~~~~~~~~~l~~l~~L~~L~l~~~~c~~l~~l~~~~~~~~~~~~~L~~L~l~~c~~l~~l~-~l~~l~~L~ 311 (459)
+++++...... +. .+..++.++.|++++ +.+..++... ...+++|++|++++ ++++.+| ++..+++|+
T Consensus 177 ~l~~n~~~~~~-~~---~~~~~~~l~~L~~s~---n~l~~~~~~~---~~~l~~L~~L~L~~-N~L~~lp~~l~~l~~L~ 245 (305)
T d1xkua_ 177 HLDGNKITKVD-AA---SLKGLNNLAKLGLSF---NSISAVDNGS---LANTPHLRELHLNN-NKLVKVPGGLADHKYIQ 245 (305)
T ss_dssp ECTTSCCCEEC-TG---GGTTCTTCCEEECCS---SCCCEECTTT---GGGSTTCCEEECCS-SCCSSCCTTTTTCSSCC
T ss_pred ECCCCcCCCCC-hh---Hhhcccccccccccc---cccccccccc---ccccccceeeeccc-ccccccccccccccCCC
Confidence 99996655433 33 678899999999998 4677765543 13578999999999 6899999 899999999
Q ss_pred EEeccCCCCCCcCCCCCC--------CCCcceEEeeCCc
Q 039619 312 SLQLCCCPKLQKFPDNGL--------PTSLLRLEIYGCP 342 (459)
Q Consensus 312 ~L~l~~c~~l~~lp~~~l--------~~sL~~L~i~~c~ 342 (459)
+|+++++ +++.++...+ +.+|+.|+++++|
T Consensus 246 ~L~Ls~N-~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~ 283 (305)
T d1xkua_ 246 VVYLHNN-NISAIGSNDFCPPGYNTKKASYSGVSLFSNP 283 (305)
T ss_dssp EEECCSS-CCCCCCTTSSSCSSCCTTSCCCSEEECCSSS
T ss_pred EEECCCC-ccCccChhhccCcchhcccCCCCEEECCCCc
Confidence 9999995 6888875322 5789999999987
No 5
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=1.5e-14 Score=133.65 Aligned_cols=181 Identities=23% Similarity=0.235 Sum_probs=101.5
Q ss_pred CCccccCCccccccCcEEEeecCCCceeecc--ccccccccceEEeecccCCccccccCCCCCcccEEeeccccCcccCc
Q 039619 120 SLTSLWSKSELPATLENIYVDRCSKLAFLSL--RGNLSKALKHLYIISCSNLESIAEGLDDNTSLETMEIFICQNLKALP 197 (459)
Q Consensus 120 ~l~~lp~~~~~~~~L~~L~l~~c~~l~~l~~--~~~lp~~L~~L~l~~c~~l~~lp~~l~~l~~L~~L~l~~c~~l~~lp 197 (459)
.++.+|+. +++++++|+|++ +.++.++. ...+ ++|++|+++++ .++.++. +..+++|++|+++++ .+...+
T Consensus 21 ~L~~iP~~--lp~~l~~L~Ls~-N~i~~l~~~~f~~l-~~L~~L~L~~N-~l~~l~~-~~~l~~L~~L~Ls~N-~l~~~~ 93 (266)
T d1p9ag_ 21 NLTALPPD--LPKDTTILHLSE-NLLYTFSLATLMPY-TRLTQLNLDRA-ELTKLQV-DGTLPVLGTLDLSHN-QLQSLP 93 (266)
T ss_dssp CCSSCCSC--CCTTCCEEECTT-SCCSEEEGGGGTTC-TTCCEEECTTS-CCCEEEC-CSCCTTCCEEECCSS-CCSSCC
T ss_pred CCCeeCcC--cCcCCCEEECcC-CcCCCcCHHHhhcc-ccccccccccc-ccccccc-ccccccccccccccc-cccccc
Confidence 45555522 234566666655 34555542 2344 55555555553 4444442 344555555555554 344444
Q ss_pred ccCCCCCCccEEeeccCCCCccccCCCCCCCccEEEEecCcccccccccCCCCCCCCCccCEEEEeCCcCCCceecCCCC
Q 039619 198 NGLRNLTSLQYLLIQDCPTIGSFTANCFPTNLASVCIDYEKIYKPLILERGPGLHRFTSVRLLTLFGGECCGVVSFPPEK 277 (459)
Q Consensus 198 ~~l~~l~~L~~L~l~~c~~l~~lp~~~~~~~L~~L~l~~~~l~~~~~~~~~~~l~~l~~L~~L~l~~~~c~~l~~l~~~~ 277 (459)
..+..+++|+.|+++++. +..++ .. .+..+.++++|++++ +.+..++...
T Consensus 94 ~~~~~l~~L~~L~l~~~~-~~~~~-----------------------~~---~~~~l~~l~~L~l~~---n~l~~l~~~~ 143 (266)
T d1p9ag_ 94 LLGQTLPALTVLDVSFNR-LTSLP-----------------------LG---ALRGLGELQELYLKG---NELKTLPPGL 143 (266)
T ss_dssp CCTTTCTTCCEEECCSSC-CCCCC-----------------------SS---TTTTCTTCCEEECTT---SCCCCCCTTT
T ss_pred cccccccccccccccccc-cceee-----------------------cc---ccccccccccccccc---cccceecccc
Confidence 444555555555554432 22222 11 345666777777776 3555555543
Q ss_pred CCCccCCCCcceEEeecCCCCCccC--CCCCCCCCCEEeccCCCCCCcCCCCCC-CCCcceEEeeCCc
Q 039619 278 DTGKALPASLKHLSIWNFPNLERIS--SIENLTSFESLQLCCCPKLQKFPDNGL-PTSLLRLEIYGCP 342 (459)
Q Consensus 278 ~~~~~~~~~L~~L~l~~c~~l~~l~--~l~~l~~L~~L~l~~c~~l~~lp~~~l-~~sL~~L~i~~c~ 342 (459)
. ..+++|+.|++++ ++++.++ .+..+++|++|+++++ +++++|...+ .++|+.|++++.|
T Consensus 144 ~---~~l~~l~~l~l~~-N~l~~~~~~~~~~l~~L~~L~Ls~N-~L~~lp~~~~~~~~L~~L~L~~Np 206 (266)
T d1p9ag_ 144 L---TPTPKLEKLSLAN-NNLTELPAGLLNGLENLDTLLLQEN-SLYTIPKGFFGSHLLPFAFLHGNP 206 (266)
T ss_dssp T---TTCTTCCEEECTT-SCCSCCCTTTTTTCTTCCEEECCSS-CCCCCCTTTTTTCCCSEEECCSCC
T ss_pred c---cccccchhccccc-ccccccCccccccccccceeecccC-CCcccChhHCCCCCCCEEEecCCC
Confidence 1 2356777777777 6677766 5677778888888774 5777776433 5678888887654
No 6
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=4.2e-14 Score=130.56 Aligned_cols=171 Identities=17% Similarity=0.122 Sum_probs=114.2
Q ss_pred eeEEEEecCCCCccccCC-ccccccCcEEEeecCCCceeeccccccccccceEEeecccCCccccccCCCCCcccEEeec
Q 039619 110 VYQLQIIPCPSLTSLWSK-SELPATLENIYVDRCSKLAFLSLRGNLSKALKHLYIISCSNLESIAEGLDDNTSLETMEIF 188 (459)
Q Consensus 110 L~~L~l~~c~~l~~lp~~-~~~~~~L~~L~l~~c~~l~~l~~~~~lp~~L~~L~l~~c~~l~~lp~~l~~l~~L~~L~l~ 188 (459)
+++|+|++ +.++.++.. ...+++|++|+++++ .++.++..+.+ ++|++|+++++ .++.++..+..+++|+.|+++
T Consensus 33 l~~L~Ls~-N~i~~l~~~~f~~l~~L~~L~L~~N-~l~~l~~~~~l-~~L~~L~Ls~N-~l~~~~~~~~~l~~L~~L~l~ 108 (266)
T d1p9ag_ 33 TTILHLSE-NLLYTFSLATLMPYTRLTQLNLDRA-ELTKLQVDGTL-PVLGTLDLSHN-QLQSLPLLGQTLPALTVLDVS 108 (266)
T ss_dssp CCEEECTT-SCCSEEEGGGGTTCTTCCEEECTTS-CCCEEECCSCC-TTCCEEECCSS-CCSSCCCCTTTCTTCCEEECC
T ss_pred CCEEECcC-CcCCCcCHHHhhccccccccccccc-ccccccccccc-ccccccccccc-ccccccccccccccccccccc
Confidence 77777766 567777632 345679999999985 78888877788 99999999985 677788888999999999999
Q ss_pred cccCcccCcccCCCCCCccEEeeccCCCCccccCCCCCCCccEEEEecCcccccccccCCCCCCCCCccCEEEEeCCcCC
Q 039619 189 ICQNLKALPNGLRNLTSLQYLLIQDCPTIGSFTANCFPTNLASVCIDYEKIYKPLILERGPGLHRFTSVRLLTLFGGECC 268 (459)
Q Consensus 189 ~c~~l~~lp~~l~~l~~L~~L~l~~c~~l~~lp~~~~~~~L~~L~l~~~~l~~~~~~~~~~~l~~l~~L~~L~l~~~~c~ 268 (459)
++......+..+..+.++++|.+.++ .+..++.. .+..+++|+.|++++ +
T Consensus 109 ~~~~~~~~~~~~~~l~~l~~L~l~~n-~l~~l~~~--------------------------~~~~l~~l~~l~l~~---N 158 (266)
T d1p9ag_ 109 FNRLTSLPLGALRGLGELQELYLKGN-ELKTLPPG--------------------------LLTPTPKLEKLSLAN---N 158 (266)
T ss_dssp SSCCCCCCSSTTTTCTTCCEEECTTS-CCCCCCTT--------------------------TTTTCTTCCEEECTT---S
T ss_pred ccccceeecccccccccccccccccc-ccceeccc--------------------------cccccccchhccccc---c
Confidence 98544434455677889999999875 56666543 223444555555554 2
Q ss_pred CceecCCCCCCCccCCCCcceEEeecCCCCCccC-CCCCCCCCCEEeccCC
Q 039619 269 GVVSFPPEKDTGKALPASLKHLSIWNFPNLERIS-SIENLTSFESLQLCCC 318 (459)
Q Consensus 269 ~l~~l~~~~~~~~~~~~~L~~L~l~~c~~l~~l~-~l~~l~~L~~L~l~~c 318 (459)
.+..++... ...+++|++|++++ +.++.+| ++..+++|+.|+++++
T Consensus 159 ~l~~~~~~~---~~~l~~L~~L~Ls~-N~L~~lp~~~~~~~~L~~L~L~~N 205 (266)
T d1p9ag_ 159 NLTELPAGL---LNGLENLDTLLLQE-NSLYTIPKGFFGSHLLPFAFLHGN 205 (266)
T ss_dssp CCSCCCTTT---TTTCTTCCEEECCS-SCCCCCCTTTTTTCCCSEEECCSC
T ss_pred cccccCccc---cccccccceeeccc-CCCcccChhHCCCCCCCEEEecCC
Confidence 344443321 01345555555555 4555555 5555566666666654
No 7
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=1.1e-13 Score=129.04 Aligned_cols=205 Identities=17% Similarity=0.258 Sum_probs=134.9
Q ss_pred CCccccCCccccccCcEEEeecCCCceeecc--ccccccccceEEeecccCCcccc-ccCCCCCcccEEeeccccCcccC
Q 039619 120 SLTSLWSKSELPATLENIYVDRCSKLAFLSL--RGNLSKALKHLYIISCSNLESIA-EGLDDNTSLETMEIFICQNLKAL 196 (459)
Q Consensus 120 ~l~~lp~~~~~~~~L~~L~l~~c~~l~~l~~--~~~lp~~L~~L~l~~c~~l~~lp-~~l~~l~~L~~L~l~~c~~l~~l 196 (459)
.++.+|. ..++++++|+|++ +.++.+|. ...+ ++|++|+++++ .+..++ ..+..+..++.+.+.....+..+
T Consensus 22 ~L~~iP~--~ip~~~~~L~Ls~-N~i~~i~~~~f~~l-~~L~~L~ls~n-~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l 96 (284)
T d1ozna_ 22 GLQAVPV--GIPAASQRIFLHG-NRISHVPAASFRAC-RNLTILWLHSN-VLARIDAAAFTGLALLEQLDLSDNAQLRSV 96 (284)
T ss_dssp CCSSCCT--TCCTTCSEEECTT-SCCCEECTTTTTTC-TTCCEEECCSS-CCCEECTTTTTTCTTCCEEECCSCTTCCCC
T ss_pred CCCccCC--CCCCCCCEEECcC-CcCCCCCHHHhhcc-ccccccccccc-cccccccccccccccccccccccccccccc
Confidence 4666663 2456777777777 46777763 3556 77777777764 455443 34455677777777666666655
Q ss_pred -cccCCCCCCccEEeeccCCCCccccCC--CCCCCccEEEEecCcccccccccCCCCCCCCCccCEEEEeCCcCCCceec
Q 039619 197 -PNGLRNLTSLQYLLIQDCPTIGSFTAN--CFPTNLASVCIDYEKIYKPLILERGPGLHRFTSVRLLTLFGGECCGVVSF 273 (459)
Q Consensus 197 -p~~l~~l~~L~~L~l~~c~~l~~lp~~--~~~~~L~~L~l~~~~l~~~~~~~~~~~l~~l~~L~~L~l~~~~c~~l~~l 273 (459)
+..+..+++|++|+++++. +..++.. ..+.+|+.+++.++.++... +. .+..+++|++|++++ +.+..+
T Consensus 97 ~~~~~~~l~~L~~L~l~~n~-~~~~~~~~~~~~~~L~~l~l~~N~l~~i~-~~---~f~~~~~L~~L~l~~---N~l~~l 168 (284)
T d1ozna_ 97 DPATFHGLGRLHTLHLDRCG-LQELGPGLFRGLAALQYLYLQDNALQALP-DD---TFRDLGNLTHLFLHG---NRISSV 168 (284)
T ss_dssp CTTTTTTCTTCCEEECTTSC-CCCCCTTTTTTCTTCCEEECCSSCCCCCC-TT---TTTTCTTCCEEECCS---SCCCEE
T ss_pred cchhhcccccCCEEecCCcc-cccccccccchhcccchhhhccccccccC-hh---Hhccccchhhccccc---Cccccc
Confidence 3456677788888887754 3333322 44677888888887776543 33 567788888888887 466666
Q ss_pred CCCCCCCccCCCCcceEEeecCCCCCccC--CCCCCCCCCEEeccCCCCCCcCCCCCC--CCCcceEEeeCCc
Q 039619 274 PPEKDTGKALPASLKHLSIWNFPNLERIS--SIENLTSFESLQLCCCPKLQKFPDNGL--PTSLLRLEIYGCP 342 (459)
Q Consensus 274 ~~~~~~~~~~~~~L~~L~l~~c~~l~~l~--~l~~l~~L~~L~l~~c~~l~~lp~~~l--~~sL~~L~i~~c~ 342 (459)
+... ...+++|+++.+++ +.+..++ .+..+++|++|+++++ .+..++...+ .++|++|++++.|
T Consensus 169 ~~~~---f~~l~~L~~l~l~~-N~l~~i~~~~f~~l~~L~~L~l~~N-~i~~~~~~~~~~~~~L~~L~l~~N~ 236 (284)
T d1ozna_ 169 PERA---FRGLHSLDRLLLHQ-NRVAHVHPHAFRDLGRLMTLYLFAN-NLSALPTEALAPLRALQYLRLNDNP 236 (284)
T ss_dssp CTTT---TTTCTTCCEEECCS-SCCCEECTTTTTTCTTCCEEECCSS-CCSCCCHHHHTTCTTCCEEECCSSC
T ss_pred chhh---hccccccchhhhhh-ccccccChhHhhhhhhccccccccc-ccccccccccccccccCEEEecCCC
Confidence 6543 12467888888887 5666664 7788888888888874 5666664222 5778888887743
No 8
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53 E-value=2e-13 Score=127.12 Aligned_cols=195 Identities=18% Similarity=0.199 Sum_probs=146.0
Q ss_pred eeEEEEecCCCCccccCC-ccccccCcEEEeecCCCceeecc--ccccccccceEEeecccCCccc-cccCCCCCcccEE
Q 039619 110 VYQLQIIPCPSLTSLWSK-SELPATLENIYVDRCSKLAFLSL--RGNLSKALKHLYIISCSNLESI-AEGLDDNTSLETM 185 (459)
Q Consensus 110 L~~L~l~~c~~l~~lp~~-~~~~~~L~~L~l~~c~~l~~l~~--~~~lp~~L~~L~l~~c~~l~~l-p~~l~~l~~L~~L 185 (459)
+++|+|++ +.++.+|.. ...+++|++|++++ ..+..++. ...+ +.++.+.+.....+..+ +..+..+++|++|
T Consensus 34 ~~~L~Ls~-N~i~~i~~~~f~~l~~L~~L~ls~-n~l~~i~~~~~~~~-~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L 110 (284)
T d1ozna_ 34 SQRIFLHG-NRISHVPAASFRACRNLTILWLHS-NVLARIDAAAFTGL-ALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (284)
T ss_dssp CSEEECTT-SCCCEECTTTTTTCTTCCEEECCS-SCCCEECTTTTTTC-TTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCEEECcC-CcCCCCCHHHhhcccccccccccc-cccccccccccccc-ccccccccccccccccccchhhcccccCCEE
Confidence 66777766 467777743 34556899999987 46777662 2445 78888888777777777 5568889999999
Q ss_pred eeccccCcccCcccCCCCCCccEEeeccCCCCccccCC--CCCCCccEEEEecCcccccccccCCCCCCCCCccCEEEEe
Q 039619 186 EIFICQNLKALPNGLRNLTSLQYLLIQDCPTIGSFTAN--CFPTNLASVCIDYEKIYKPLILERGPGLHRFTSVRLLTLF 263 (459)
Q Consensus 186 ~l~~c~~l~~lp~~l~~l~~L~~L~l~~c~~l~~lp~~--~~~~~L~~L~l~~~~l~~~~~~~~~~~l~~l~~L~~L~l~ 263 (459)
+++++......+..+..+++|+.+++.+ +.++.++.. ...++|+.|+++++.++... +. .+.++++|+.++++
T Consensus 111 ~l~~n~~~~~~~~~~~~~~~L~~l~l~~-N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~-~~---~f~~l~~L~~l~l~ 185 (284)
T d1ozna_ 111 HLDRCGLQELGPGLFRGLAALQYLYLQD-NALQALPDDTFRDLGNLTHLFLHGNRISSVP-ER---AFRGLHSLDRLLLH 185 (284)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCS-SCCCCCCTTTTTTCTTCCEEECCSSCCCEEC-TT---TTTTCTTCCEEECC
T ss_pred ecCCcccccccccccchhcccchhhhcc-ccccccChhHhccccchhhcccccCcccccc-hh---hhccccccchhhhh
Confidence 9998854333334566788999999987 467777754 34788999999998887544 44 67899999999999
Q ss_pred CCcCCCceecCCCCCCCccCCCCcceEEeecCCCCCccC--CCCCCCCCCEEeccCCC
Q 039619 264 GGECCGVVSFPPEKDTGKALPASLKHLSIWNFPNLERIS--SIENLTSFESLQLCCCP 319 (459)
Q Consensus 264 ~~~c~~l~~l~~~~~~~~~~~~~L~~L~l~~c~~l~~l~--~l~~l~~L~~L~l~~c~ 319 (459)
+ +......|..+ ..+++|++|++++ +.+..++ .+..+++|++|++++++
T Consensus 186 ~--N~l~~i~~~~f----~~l~~L~~L~l~~-N~i~~~~~~~~~~~~~L~~L~l~~N~ 236 (284)
T d1ozna_ 186 Q--NRVAHVHPHAF----RDLGRLMTLYLFA-NNLSALPTEALAPLRALQYLRLNDNP 236 (284)
T ss_dssp S--SCCCEECTTTT----TTCTTCCEEECCS-SCCSCCCHHHHTTCTTCCEEECCSSC
T ss_pred h--ccccccChhHh----hhhhhcccccccc-cccccccccccccccccCEEEecCCC
Confidence 8 33333345554 3678999999999 7888888 78889999999999854
No 9
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.52 E-value=4.3e-14 Score=133.61 Aligned_cols=220 Identities=14% Similarity=0.089 Sum_probs=164.9
Q ss_pred eeEEEEecCCCCc--cccCCccccccCcEEEeecCCCce-eecc-ccccccccceEEeecccCCccccccCCCCCcccEE
Q 039619 110 VYQLQIIPCPSLT--SLWSKSELPATLENIYVDRCSKLA-FLSL-RGNLSKALKHLYIISCSNLESIAEGLDDNTSLETM 185 (459)
Q Consensus 110 L~~L~l~~c~~l~--~lp~~~~~~~~L~~L~l~~c~~l~-~l~~-~~~lp~~L~~L~l~~c~~l~~lp~~l~~l~~L~~L 185 (459)
++.|+++++..-. .+|+.++.+++|++|++++|+++. .+|. .+++ ++|++|+++++......+..+..+.+|+.+
T Consensus 52 v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L-~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l 130 (313)
T d1ogqa_ 52 VNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKL-TQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp EEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGC-TTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred EEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccc-cccchhhhccccccccccccccchhhhccc
Confidence 8899999853322 577778888899999999887776 6773 4778 999999999975444446668889999999
Q ss_pred eeccccCcccCcccCCCCCCccEEeeccCCCCccccCC--CCCCCccEEEEecCcccccccccCCCCCCCCCccCEEEEe
Q 039619 186 EIFICQNLKALPNGLRNLTSLQYLLIQDCPTIGSFTAN--CFPTNLASVCIDYEKIYKPLILERGPGLHRFTSVRLLTLF 263 (459)
Q Consensus 186 ~l~~c~~l~~lp~~l~~l~~L~~L~l~~c~~l~~lp~~--~~~~~L~~L~l~~~~l~~~~~~~~~~~l~~l~~L~~L~l~ 263 (459)
+++++.....+|..+..+++|+.++++++.....+|.. .....++.++++++++.... +. .+..+. +..+++.
T Consensus 131 ~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~-~~---~~~~l~-~~~l~l~ 205 (313)
T d1ogqa_ 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKI-PP---TFANLN-LAFVDLS 205 (313)
T ss_dssp ECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEEC-CG---GGGGCC-CSEEECC
T ss_pred ccccccccccCchhhccCcccceeeccccccccccccccccccccccccccccccccccc-cc---cccccc-ccccccc
Confidence 99998877888999999999999999987655566654 33445588888888876544 33 444443 3467777
Q ss_pred CCcCCCceecCCCCCCCccCCCCcceEEeecCCCCCccC-CCCCCCCCCEEeccCCCCCCcCCCC-CCCCCcceEEeeCC
Q 039619 264 GGECCGVVSFPPEKDTGKALPASLKHLSIWNFPNLERIS-SIENLTSFESLQLCCCPKLQKFPDN-GLPTSLLRLEIYGC 341 (459)
Q Consensus 264 ~~~c~~l~~l~~~~~~~~~~~~~L~~L~l~~c~~l~~l~-~l~~l~~L~~L~l~~c~~l~~lp~~-~l~~sL~~L~i~~c 341 (459)
+ +.....+|... ...++|+.++++++ .+...+ .+..+++|+.|++++|.--..+|.. +-+++|++|+++++
T Consensus 206 ~--~~~~~~~~~~~----~~~~~l~~l~~~~~-~l~~~~~~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N 278 (313)
T d1ogqa_ 206 R--NMLEGDASVLF----GSDKNTQKIHLAKN-SLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFN 278 (313)
T ss_dssp S--SEEEECCGGGC----CTTSCCSEEECCSS-EECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSS
T ss_pred c--ccccccccccc----cccccccccccccc-cccccccccccccccccccCccCeecccCChHHhCCCCCCEEECcCC
Confidence 7 45555556554 26789999999985 455444 7888899999999996443378863 22689999999987
Q ss_pred c
Q 039619 342 P 342 (459)
Q Consensus 342 ~ 342 (459)
.
T Consensus 279 ~ 279 (313)
T d1ogqa_ 279 N 279 (313)
T ss_dssp E
T ss_pred c
Confidence 4
No 10
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.52 E-value=9.8e-13 Score=125.41 Aligned_cols=223 Identities=21% Similarity=0.174 Sum_probs=110.5
Q ss_pred CCCcCceEEeCCCCCCCCCccc--eeEEEEecCCCCccccCCccccccCcEEEeecCCCceeeccccccccccceEEeec
Q 039619 88 SVTLKDPEVLDCPVCYEPLTIP--VYQLQIIPCPSLTSLWSKSELPATLENIYVDRCSKLAFLSLRGNLSKALKHLYIIS 165 (459)
Q Consensus 88 p~~L~~L~l~~c~~l~~l~~lp--L~~L~l~~c~~l~~lp~~~~~~~~L~~L~l~~c~~l~~l~~~~~lp~~L~~L~l~~ 165 (459)
+.+|+.|++.++. +..+..+| |++|++++ +.++.+| ....+++|++|+++++. +...+. .. ..+..+.+..
T Consensus 77 ~~~L~~L~l~~n~-l~~l~~lp~~L~~L~L~~-n~l~~lp-~~~~l~~L~~L~l~~~~-~~~~~~--~~-~~l~~l~~~~ 149 (353)
T d1jl5a_ 77 PQSLKSLLVDNNN-LKALSDLPPLLEYLGVSN-NQLEKLP-ELQNSSFLKIIDVDNNS-LKKLPD--LP-PSLEFIAAGN 149 (353)
T ss_dssp CTTCCEEECCSSC-CSCCCSCCTTCCEEECCS-SCCSSCC-CCTTCTTCCEEECCSSC-CSCCCC--CC-TTCCEEECCS
T ss_pred hhhhhhhhhhhcc-cchhhhhccccccccccc-ccccccc-chhhhccceeecccccc-cccccc--cc-ccccchhhcc
Confidence 3466666666642 13344444 66777665 3466666 33445567777666542 232221 11 3334444433
Q ss_pred ccCCccccccCCCCCcccEEeeccccC-------------------cccCcccCCCCCCccEEeeccCCCCccccCCCCC
Q 039619 166 CSNLESIAEGLDDNTSLETMEIFICQN-------------------LKALPNGLRNLTSLQYLLIQDCPTIGSFTANCFP 226 (459)
Q Consensus 166 c~~l~~lp~~l~~l~~L~~L~l~~c~~-------------------l~~lp~~l~~l~~L~~L~l~~c~~l~~lp~~~~~ 226 (459)
+.... ...+..++.++.|.+.++.. +..++ ....++.|+.+.++++. ...++ ...
T Consensus 150 ~~~~~--~~~l~~l~~l~~L~l~~n~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~l~~L~~l~l~~n~-~~~~~--~~~ 223 (353)
T d1jl5a_ 150 NQLEE--LPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELP-ELQNLPFLTTIYADNNL-LKTLP--DLP 223 (353)
T ss_dssp SCCSS--CCCCTTCTTCCEEECCSSCCSSCCCCCTTCCEEECCSSCCSSCC-CCTTCTTCCEEECCSSC-CSSCC--SCC
T ss_pred ccccc--cccccccccceecccccccccccccccccccccccccccccccc-ccccccccccccccccc-ccccc--ccc
Confidence 22111 12344455566665554321 11221 23456667777776543 22332 233
Q ss_pred CCccEEEEecCcccccccccCCCCCCCCCccCEEEEeCCcC-----------------CCceecCCCCCCCccCCCCcce
Q 039619 227 TNLASVCIDYEKIYKPLILERGPGLHRFTSVRLLTLFGGEC-----------------CGVVSFPPEKDTGKALPASLKH 289 (459)
Q Consensus 227 ~~L~~L~l~~~~l~~~~~~~~~~~l~~l~~L~~L~l~~~~c-----------------~~l~~l~~~~~~~~~~~~~L~~ 289 (459)
.++..+.+.++.+.... ....++....+....+ ..+..++. .+++|++
T Consensus 224 ~~l~~~~~~~~~~~~~~--------~~~~~l~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~-------~~~~L~~ 288 (353)
T d1jl5a_ 224 PSLEALNVRDNYLTDLP--------ELPQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCD-------LPPSLEE 288 (353)
T ss_dssp TTCCEEECCSSCCSCCC--------CCCTTCCEEECCSSCCSEESCCCTTCCEEECCSSCCSEECC-------CCTTCCE
T ss_pred ccccccccccccccccc--------cccccccccccccccccccccccchhcccccccCccccccc-------cCCCCCE
Confidence 44555555443332111 1112222222222101 12222222 4567888
Q ss_pred EEeecCCCCCccCCCCCCCCCCEEeccCCCCCCcCCCCCCCCCcceEEeeCCchhH
Q 039619 290 LSIWNFPNLERISSIENLTSFESLQLCCCPKLQKFPDNGLPTSLLRLEIYGCPLIE 345 (459)
Q Consensus 290 L~l~~c~~l~~l~~l~~l~~L~~L~l~~c~~l~~lp~~~l~~sL~~L~i~~c~~L~ 345 (459)
|++++ +.++.+| ..+++|++|++++| +++++|. .+++|++|++++|+ ++
T Consensus 289 L~Ls~-N~l~~lp--~~~~~L~~L~L~~N-~L~~l~~--~~~~L~~L~L~~N~-L~ 337 (353)
T d1jl5a_ 289 LNVSN-NKLIELP--ALPPRLERLIASFN-HLAEVPE--LPQNLKQLHVEYNP-LR 337 (353)
T ss_dssp EECCS-SCCSCCC--CCCTTCCEEECCSS-CCSCCCC--CCTTCCEEECCSSC-CS
T ss_pred EECCC-CccCccc--cccCCCCEEECCCC-cCCcccc--ccCCCCEEECcCCc-CC
Confidence 88887 5677777 22567888888764 6777776 56778888888876 44
No 11
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.48 E-value=1.4e-12 Score=124.25 Aligned_cols=54 Identities=24% Similarity=0.244 Sum_probs=38.9
Q ss_pred CCCCCCEEeccCCCCCCcCCCCCCCCCcceEEeeCCchhHHhhhcCcCCccccccCCCeEEeCcee
Q 039619 306 NLTSFESLQLCCCPKLQKFPDNGLPTSLLRLEIYGCPLIEERFEKDKGQYWSLIADIPCVRIDCHY 371 (459)
Q Consensus 306 ~l~~L~~L~l~~c~~l~~lp~~~l~~sL~~L~i~~c~~L~~~~~~~~~~~~~~i~~i~~l~~~~~~ 371 (459)
.+++|++|++++| +++.+|. .+++|+.|++++|. ++... ....++..+++.++.
T Consensus 282 ~~~~L~~L~Ls~N-~l~~lp~--~~~~L~~L~L~~N~-L~~l~--------~~~~~L~~L~L~~N~ 335 (353)
T d1jl5a_ 282 LPPSLEELNVSNN-KLIELPA--LPPRLERLIASFNH-LAEVP--------ELPQNLKQLHVEYNP 335 (353)
T ss_dssp CCTTCCEEECCSS-CCSCCCC--CCTTCCEEECCSSC-CSCCC--------CCCTTCCEEECCSSC
T ss_pred cCCCCCEEECCCC-ccCcccc--ccCCCCEEECCCCc-CCccc--------cccCCCCEEECcCCc
Confidence 3579999999996 6888986 46899999998874 33221 113467778887764
No 12
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.48 E-value=1.9e-13 Score=122.93 Aligned_cols=145 Identities=18% Similarity=0.211 Sum_probs=66.1
Q ss_pred CCCCCcccEEeeccccCcccCcccCCCCCCccEEeeccCCCCccccCCCCCCCccEEEEecCcccccccccCCCCCCCCC
Q 039619 176 LDDNTSLETMEIFICQNLKALPNGLRNLTSLQYLLIQDCPTIGSFTANCFPTNLASVCIDYEKIYKPLILERGPGLHRFT 255 (459)
Q Consensus 176 l~~l~~L~~L~l~~c~~l~~lp~~l~~l~~L~~L~l~~c~~l~~lp~~~~~~~L~~L~l~~~~l~~~~~~~~~~~l~~l~ 255 (459)
+..+++|+.++++++ .++.++ .+..+++|+.+.+++|.. ..++.....+.++.+.++++.+.... .+..++
T Consensus 81 l~~l~~l~~l~~~~n-~~~~i~-~l~~l~~L~~l~l~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~------~~~~~~ 151 (227)
T d1h6ua2 81 LKNLTKITELELSGN-PLKNVS-AIAGLQSIKTLDLTSTQI-TDVTPLAGLSNLQVLYLDLNQITNIS------PLAGLT 151 (227)
T ss_dssp GTTCCSCCEEECCSC-CCSCCG-GGTTCTTCCEEECTTSCC-CCCGGGTTCTTCCEEECCSSCCCCCG------GGGGCT
T ss_pred ccccccccccccccc-cccccc-cccccccccccccccccc-cccchhccccchhhhhchhhhhchhh------hhcccc
Confidence 344444444444443 223332 233444444444444321 12222223344444444443333222 234455
Q ss_pred ccCEEEEeCCcCCCceecCCCCCCCccCCCCcceEEeecCCCCCccCCCCCCCCCCEEeccCCCCCCcCCCCCCCCCcce
Q 039619 256 SVRLLTLFGGECCGVVSFPPEKDTGKALPASLKHLSIWNFPNLERISSIENLTSFESLQLCCCPKLQKFPDNGLPTSLLR 335 (459)
Q Consensus 256 ~L~~L~l~~~~c~~l~~l~~~~~~~~~~~~~L~~L~l~~c~~l~~l~~l~~l~~L~~L~l~~c~~l~~lp~~~l~~sL~~ 335 (459)
+|++|++++ | .+...+.- ..+++|++|++++ +.+++++.+.++++|++|++++| ++++++.-.-+++|+.
T Consensus 152 ~L~~L~l~~--n-~~~~~~~l-----~~l~~L~~L~Ls~-n~l~~l~~l~~l~~L~~L~Ls~N-~lt~i~~l~~l~~L~~ 221 (227)
T d1h6ua2 152 NLQYLSIGN--A-QVSDLTPL-----ANLSKLTTLKADD-NKISDISPLASLPNLIEVHLKNN-QISDVSPLANTSNLFI 221 (227)
T ss_dssp TCCEEECCS--S-CCCCCGGG-----TTCTTCCEEECCS-SCCCCCGGGGGCTTCCEEECTTS-CCCBCGGGTTCTTCCE
T ss_pred ccccccccc--c-ccccchhh-----cccccceecccCC-CccCCChhhcCCCCCCEEECcCC-cCCCCcccccCCCCCE
Confidence 566666555 2 22222221 1345566666665 35555554555666666666665 4665554222456666
Q ss_pred EEee
Q 039619 336 LEIY 339 (459)
Q Consensus 336 L~i~ 339 (459)
|+++
T Consensus 222 L~ls 225 (227)
T d1h6ua2 222 VTLT 225 (227)
T ss_dssp EEEE
T ss_pred EEee
Confidence 6654
No 13
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.47 E-value=4.1e-12 Score=119.20 Aligned_cols=190 Identities=18% Similarity=0.164 Sum_probs=108.1
Q ss_pred eeEEEEecCCCCccccCCccccccCcEEEeecCCCceeecc--ccccccccceEEeecccCC--ccccccCCCCCcccEE
Q 039619 110 VYQLQIIPCPSLTSLWSKSELPATLENIYVDRCSKLAFLSL--RGNLSKALKHLYIISCSNL--ESIAEGLDDNTSLETM 185 (459)
Q Consensus 110 L~~L~l~~c~~l~~lp~~~~~~~~L~~L~l~~c~~l~~l~~--~~~lp~~L~~L~l~~c~~l--~~lp~~l~~l~~L~~L 185 (459)
|++|++++ +.++.+|. . ....++.|.+.+ +.+..++. .... ..+..+....+... ...+..+..+++|+.+
T Consensus 81 L~~L~l~~-n~l~~l~~-~-~~~~l~~L~~~~-n~l~~l~~~~~~~~-~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l 155 (305)
T d1xkua_ 81 LERLYLSK-NQLKELPE-K-MPKTLQELRVHE-NEITKVRKSVFNGL-NQMIVVELGTNPLKSSGIENGAFQGMKKLSYI 155 (305)
T ss_dssp CCEEECCS-SCCSBCCS-S-CCTTCCEEECCS-SCCCBBCHHHHTTC-TTCCEEECCSSCCCGGGBCTTGGGGCTTCCEE
T ss_pred cCEecccC-CccCcCcc-c-hhhhhhhhhccc-cchhhhhhhhhhcc-ccccccccccccccccCCCccccccccccCcc
Confidence 44555544 23445542 1 223566666555 23444431 1122 34444544433211 1123345556677777
Q ss_pred eeccccCcccCcccCCCCCCccEEeeccCCCCccccCC-CCCCCccEEEEecCcccccccccCCCCCCCCCccCEEEEeC
Q 039619 186 EIFICQNLKALPNGLRNLTSLQYLLIQDCPTIGSFTAN-CFPTNLASVCIDYEKIYKPLILERGPGLHRFTSVRLLTLFG 264 (459)
Q Consensus 186 ~l~~c~~l~~lp~~l~~l~~L~~L~l~~c~~l~~lp~~-~~~~~L~~L~l~~~~l~~~~~~~~~~~l~~l~~L~~L~l~~ 264 (459)
++.++ .+..+|.. .+++|+.|++.++......+.. ..+++++.|+++++.+.... +. .+.++++|++|++++
T Consensus 156 ~l~~n-~l~~l~~~--~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~-~~---~~~~l~~L~~L~L~~ 228 (305)
T d1xkua_ 156 RIADT-NITTIPQG--LPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVD-NG---SLANTPHLRELHLNN 228 (305)
T ss_dssp ECCSS-CCCSCCSS--CCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEEC-TT---TGGGSTTCCEEECCS
T ss_pred ccccC-CccccCcc--cCCccCEEECCCCcCCCCChhHhhccccccccccccccccccc-cc---cccccccceeeeccc
Confidence 77665 44455443 2567777777665433332222 33566777777766665433 33 556788888888888
Q ss_pred CcCCCceecCCCCCCCccCCCCcceEEeecCCCCCccC--C------CCCCCCCCEEeccCCC
Q 039619 265 GECCGVVSFPPEKDTGKALPASLKHLSIWNFPNLERIS--S------IENLTSFESLQLCCCP 319 (459)
Q Consensus 265 ~~c~~l~~l~~~~~~~~~~~~~L~~L~l~~c~~l~~l~--~------l~~l~~L~~L~l~~c~ 319 (459)
+.++.+|.++ ..+++|++|++++ ++++.++ . ...+.+|+.|++++++
T Consensus 229 ---N~L~~lp~~l----~~l~~L~~L~Ls~-N~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~ 283 (305)
T d1xkua_ 229 ---NKLVKVPGGL----ADHKYIQVVYLHN-NNISAIGSNDFCPPGYNTKKASYSGVSLFSNP 283 (305)
T ss_dssp ---SCCSSCCTTT----TTCSSCCEEECCS-SCCCCCCTTSSSCSSCCTTSCCCSEEECCSSS
T ss_pred ---cccccccccc----ccccCCCEEECCC-CccCccChhhccCcchhcccCCCCEEECCCCc
Confidence 3677787765 3678888888888 6788775 1 2356789999998865
No 14
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.46 E-value=1.6e-13 Score=121.85 Aligned_cols=163 Identities=16% Similarity=0.216 Sum_probs=75.4
Q ss_pred cccceEEeecccCCccccccCCCCCcccEEeeccccCcccCcccCCCCCCccEEeeccCCCCccccCCCCCCCccEEEEe
Q 039619 156 KALKHLYIISCSNLESIAEGLDDNTSLETMEIFICQNLKALPNGLRNLTSLQYLLIQDCPTIGSFTANCFPTNLASVCID 235 (459)
Q Consensus 156 ~~L~~L~l~~c~~l~~lp~~l~~l~~L~~L~l~~c~~l~~lp~~l~~l~~L~~L~l~~c~~l~~lp~~~~~~~L~~L~l~ 235 (459)
.+|++|+++++ .++.++ ++..+++|++|+++++ .++.++ .+..+++|+.|++++| .++.++....+++|+.|++.
T Consensus 46 ~~L~~L~l~~~-~i~~l~-~l~~l~~L~~L~L~~n-~i~~l~-~~~~l~~L~~L~l~~n-~i~~l~~l~~l~~L~~L~l~ 120 (210)
T d1h6ta2 46 NSIDQIIANNS-DIKSVQ-GIQYLPNVTKLFLNGN-KLTDIK-PLANLKNLGWLFLDEN-KVKDLSSLKDLKKLKSLSLE 120 (210)
T ss_dssp HTCCEEECTTS-CCCCCT-TGGGCTTCCEEECCSS-CCCCCG-GGTTCTTCCEEECCSS-CCCCGGGGTTCTTCCEEECT
T ss_pred cCccEEECcCC-CCCCch-hHhhCCCCCEEeCCCc-cccCcc-ccccCccccccccccc-cccccccccccccccccccc
Confidence 34444444442 233332 2344444444444444 333332 2334444444444443 23344333334444455444
Q ss_pred cCcccccccccCCCCCCCCCccCEEEEeCCcCCCceecCCCCCCCccCCCCcceEEeecCCCCCccCCCCCCCCCCEEec
Q 039619 236 YEKIYKPLILERGPGLHRFTSVRLLTLFGGECCGVVSFPPEKDTGKALPASLKHLSIWNFPNLERISSIENLTSFESLQL 315 (459)
Q Consensus 236 ~~~l~~~~~~~~~~~l~~l~~L~~L~l~~~~c~~l~~l~~~~~~~~~~~~~L~~L~l~~c~~l~~l~~l~~l~~L~~L~l 315 (459)
++.+.... .+..+++|+.+++++ +.+..++... .+++|+.+++++ +.++.++.+..+++|++|++
T Consensus 121 ~~~~~~~~------~l~~l~~l~~l~~~~---n~l~~~~~~~-----~l~~L~~l~l~~-n~l~~i~~l~~l~~L~~L~L 185 (210)
T d1h6ta2 121 HNGISDIN------GLVHLPQLESLYLGN---NKITDITVLS-----RLTKLDTLSLED-NQISDIVPLAGLTKLQNLYL 185 (210)
T ss_dssp TSCCCCCG------GGGGCTTCCEEECCS---SCCCCCGGGG-----GCTTCSEEECCS-SCCCCCGGGTTCTTCCEEEC
T ss_pred cccccccc------ccccccccccccccc---cccccccccc-----cccccccccccc-ccccccccccCCCCCCEEEC
Confidence 43333222 344555556665554 2333332211 345566666665 45555544555666666666
Q ss_pred cCCCCCCcCCCCCCCCCcceEEee
Q 039619 316 CCCPKLQKFPDNGLPTSLLRLEIY 339 (459)
Q Consensus 316 ~~c~~l~~lp~~~l~~sL~~L~i~ 339 (459)
++| .+++++.-.-+++|++|+++
T Consensus 186 s~N-~i~~l~~l~~l~~L~~L~Ls 208 (210)
T d1h6ta2 186 SKN-HISDLRALAGLKNLDVLELF 208 (210)
T ss_dssp CSS-CCCBCGGGTTCTTCSEEEEE
T ss_pred CCC-CCCCChhhcCCCCCCEEEcc
Confidence 664 45555532224566666664
No 15
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46 E-value=1.4e-12 Score=118.22 Aligned_cols=207 Identities=20% Similarity=0.232 Sum_probs=120.2
Q ss_pred EEEecCCCCccccCCccccccCcEEEeecCCCceeecc--ccccccccceEEeecccCCcccc-ccCCCCCcccEEeecc
Q 039619 113 LQIIPCPSLTSLWSKSELPATLENIYVDRCSKLAFLSL--RGNLSKALKHLYIISCSNLESIA-EGLDDNTSLETMEIFI 189 (459)
Q Consensus 113 L~l~~c~~l~~lp~~~~~~~~L~~L~l~~c~~l~~l~~--~~~lp~~L~~L~l~~c~~l~~lp-~~l~~l~~L~~L~l~~ 189 (459)
++.++ ..++++|. .+++++++|++++ +.++.+|. ...+ ++|++|+++++.....++ ..+..+++++++.+..
T Consensus 13 i~c~~-~~l~~iP~--~l~~~l~~L~Ls~-n~i~~l~~~~f~~l-~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~ 87 (242)
T d1xwdc1 13 FLCQE-SKVTEIPS--DLPRNAIELRFVL-TKLRVIQKGAFSGF-GDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 87 (242)
T ss_dssp EEEES-CSCSSCCS--CSCSCCSEEEEES-CCCCEECTTTTTTC-TTCCEEEEESCTTCCEECSSSEESCTTCCEEEEEC
T ss_pred EEEeC-CCCCCcCC--CCCCCCCEEECcC-CcCCccChhHhhcc-chhhhhhhccccccceeeccccccccccccccccc
Confidence 34433 44566663 2345677777776 35666663 2456 677777777755444443 2355667777777766
Q ss_pred ccCcccCc-ccCCCCCCccEEeeccCCCCccccCCCCCCCccEEEE---ecCcccccccccCCCCCCCCC-ccCEEEEeC
Q 039619 190 CQNLKALP-NGLRNLTSLQYLLIQDCPTIGSFTANCFPTNLASVCI---DYEKIYKPLILERGPGLHRFT-SVRLLTLFG 264 (459)
Q Consensus 190 c~~l~~lp-~~l~~l~~L~~L~l~~c~~l~~lp~~~~~~~L~~L~l---~~~~l~~~~~~~~~~~l~~l~-~L~~L~l~~ 264 (459)
+..+..++ ..+..+++|+.|+++++ .+...+....+.+++.+.. .++.+.... .. .+..++ .++.|++.+
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~l~l~~~-~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~-~~---~~~~~~~~l~~L~l~~ 162 (242)
T d1xwdc1 88 ANNLLYINPEAFQNLPNLQYLLISNT-GIKHLPDVHKIHSLQKVLLDIQDNINIHTIE-RN---SFVGLSFESVILWLNK 162 (242)
T ss_dssp CTTCCEECTTSEECCTTCCEEEEESC-CCCSCCCCTTTCBSSCEEEEEESCTTCCEEC-TT---SSTTSBSSCEEEECCS
T ss_pred cccccccccccccccccccccccchh-hhccccccccccccccccccccccccccccc-cc---ccccccccceeeeccc
Confidence 65555443 33566777777777664 3545544444444444433 223333211 11 334443 677777766
Q ss_pred CcCCCceecCCCCCCCccCCCCcceEEeecCCCCCccC--CCCCCCCCCEEeccCCCCCCcCCCCCCCCCcceEEe
Q 039619 265 GECCGVVSFPPEKDTGKALPASLKHLSIWNFPNLERIS--SIENLTSFESLQLCCCPKLQKFPDNGLPTSLLRLEI 338 (459)
Q Consensus 265 ~~c~~l~~l~~~~~~~~~~~~~L~~L~l~~c~~l~~l~--~l~~l~~L~~L~l~~c~~l~~lp~~~l~~sL~~L~i 338 (459)
+.+..++... ....+++++...+++.++.++ .+.++++|++|+++++ +++.+|..++ .+|..|..
T Consensus 163 ---n~l~~i~~~~----~~~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N-~l~~l~~~~~-~~l~~L~~ 229 (242)
T d1xwdc1 163 ---NGIQEIHNCA----FNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRT-RIHSLPSYGL-ENLKKLRA 229 (242)
T ss_dssp ---SCCCEECTTT----TTTCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTS-CCCCCCSSSC-TTCCEEES
T ss_pred ---cccccccccc----ccchhhhccccccccccccccHHHhcCCCCCCEEECCCC-cCCccCHHHH-cCCccccc
Confidence 5666666644 144566666655557888887 4678888888888874 5788876443 44444443
No 16
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.44 E-value=2.4e-13 Score=120.75 Aligned_cols=162 Identities=19% Similarity=0.277 Sum_probs=79.4
Q ss_pred eeEEEEecCCCCccccCCccccccCcEEEeecCCCceeeccccccccccceEEeecccCCccccccCCCCCcccEEeecc
Q 039619 110 VYQLQIIPCPSLTSLWSKSELPATLENIYVDRCSKLAFLSLRGNLSKALKHLYIISCSNLESIAEGLDDNTSLETMEIFI 189 (459)
Q Consensus 110 L~~L~l~~c~~l~~lp~~~~~~~~L~~L~l~~c~~l~~l~~~~~lp~~L~~L~l~~c~~l~~lp~~l~~l~~L~~L~l~~ 189 (459)
|++|++++ ..++.++ .+..+++|++|+++++ .++.++..+.+ ++|++|+++++ .++.++ .+..+++|+.|++.+
T Consensus 48 L~~L~l~~-~~i~~l~-~l~~l~~L~~L~L~~n-~i~~l~~~~~l-~~L~~L~l~~n-~i~~l~-~l~~l~~L~~L~l~~ 121 (210)
T d1h6ta2 48 IDQIIANN-SDIKSVQ-GIQYLPNVTKLFLNGN-KLTDIKPLANL-KNLGWLFLDEN-KVKDLS-SLKDLKKLKSLSLEH 121 (210)
T ss_dssp CCEEECTT-SCCCCCT-TGGGCTTCCEEECCSS-CCCCCGGGTTC-TTCCEEECCSS-CCCCGG-GGTTCTTCCEEECTT
T ss_pred ccEEECcC-CCCCCch-hHhhCCCCCEEeCCCc-cccCccccccC-ccccccccccc-cccccc-ccccccccccccccc
Confidence 55555544 2344444 2333445555555553 34444433344 45555555543 344443 244445555555544
Q ss_pred ccCcccCcccCCCCCCccEEeeccCCCCccccCCCCCCCccEEEEecCcccccccccCCCCCCCCCccCEEEEeCCcCCC
Q 039619 190 CQNLKALPNGLRNLTSLQYLLIQDCPTIGSFTANCFPTNLASVCIDYEKIYKPLILERGPGLHRFTSVRLLTLFGGECCG 269 (459)
Q Consensus 190 c~~l~~lp~~l~~l~~L~~L~l~~c~~l~~lp~~~~~~~L~~L~l~~~~l~~~~~~~~~~~l~~l~~L~~L~l~~~~c~~ 269 (459)
+. ...++ .+..+++| +.++++++.+.+.. .+..+++|+.+++++ +.
T Consensus 122 ~~-~~~~~-~l~~l~~l-----------------------~~l~~~~n~l~~~~------~~~~l~~L~~l~l~~---n~ 167 (210)
T d1h6ta2 122 NG-ISDIN-GLVHLPQL-----------------------ESLYLGNNKITDIT------VLSRLTKLDTLSLED---NQ 167 (210)
T ss_dssp SC-CCCCG-GGGGCTTC-----------------------CEEECCSSCCCCCG------GGGGCTTCSEEECCS---SC
T ss_pred cc-ccccc-cccccccc-----------------------cccccccccccccc------ccccccccccccccc---cc
Confidence 42 22221 23344444 44444444443322 234556666666665 24
Q ss_pred ceecCCCCCCCccCCCCcceEEeecCCCCCccCCCCCCCCCCEEeccC
Q 039619 270 VVSFPPEKDTGKALPASLKHLSIWNFPNLERISSIENLTSFESLQLCC 317 (459)
Q Consensus 270 l~~l~~~~~~~~~~~~~L~~L~l~~c~~l~~l~~l~~l~~L~~L~l~~ 317 (459)
+..++.-. .+++|++|++++ +.+++++.+.++++|++|++++
T Consensus 168 l~~i~~l~-----~l~~L~~L~Ls~-N~i~~l~~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 168 ISDIVPLA-----GLTKLQNLYLSK-NHISDLRALAGLKNLDVLELFS 209 (210)
T ss_dssp CCCCGGGT-----TCTTCCEEECCS-SCCCBCGGGTTCTTCSEEEEEE
T ss_pred cccccccc-----CCCCCCEEECCC-CCCCCChhhcCCCCCCEEEccC
Confidence 44443311 456666666666 4566666566677777777653
No 17
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.44 E-value=3.1e-13 Score=118.93 Aligned_cols=160 Identities=21% Similarity=0.244 Sum_probs=90.9
Q ss_pred cccceEEeecccCCccccccCCCCCcccEEeeccccCcccCcccCCCCCCccEEeeccCCCCccccCCCCCCCccEEEEe
Q 039619 156 KALKHLYIISCSNLESIAEGLDDNTSLETMEIFICQNLKALPNGLRNLTSLQYLLIQDCPTIGSFTANCFPTNLASVCID 235 (459)
Q Consensus 156 ~~L~~L~l~~c~~l~~lp~~l~~l~~L~~L~l~~c~~l~~lp~~l~~l~~L~~L~l~~c~~l~~lp~~~~~~~L~~L~l~ 235 (459)
+++++|+++++ .++++ +++..+++|++|++++| .++.++. +.++++|++|+++++. +..++....+++|+.|+++
T Consensus 40 ~~l~~L~l~~~-~i~~l-~~l~~l~nL~~L~Ls~N-~l~~~~~-l~~l~~L~~L~l~~n~-~~~~~~l~~l~~L~~L~l~ 114 (199)
T d2omxa2 40 DQVTTLQADRL-GIKSI-DGVEYLNNLTQINFSNN-QLTDITP-LKNLTKLVDILMNNNQ-IADITPLANLTNLTGLTLF 114 (199)
T ss_dssp TTCCEEECTTS-CCCCC-TTGGGCTTCCEEECCSS-CCCCCGG-GTTCTTCCEEECCSSC-CCCCGGGTTCTTCSEEECC
T ss_pred cCCCEEECCCC-CCCCc-cccccCCCcCcCccccc-cccCccc-ccCCcccccccccccc-ccccccccccccccccccc
Confidence 55566666553 34444 23555666666666665 4444432 5566666666665542 3344433445566666665
Q ss_pred cCcccccccccCCCCCCCCCccCEEEEeCCcCCCceecCCCCCCCccCCCCcceEEeecCCCCCccCCCCCCCCCCEEec
Q 039619 236 YEKIYKPLILERGPGLHRFTSVRLLTLFGGECCGVVSFPPEKDTGKALPASLKHLSIWNFPNLERISSIENLTSFESLQL 315 (459)
Q Consensus 236 ~~~l~~~~~~~~~~~l~~l~~L~~L~l~~~~c~~l~~l~~~~~~~~~~~~~L~~L~l~~c~~l~~l~~l~~l~~L~~L~l 315 (459)
++...... .+..+++|+.|++++ +.+..++.-. ..++|++|++.+ +.++.++.+.++++|++|++
T Consensus 115 ~~~~~~~~------~~~~l~~L~~L~l~~---n~l~~~~~l~-----~~~~L~~L~l~~-n~l~~l~~l~~l~~L~~L~l 179 (199)
T d2omxa2 115 NNQITDID------PLKNLTNLNRLELSS---NTISDISALS-----GLTSLQQLNFSS-NQVTDLKPLANLTTLERLDI 179 (199)
T ss_dssp SSCCCCCG------GGTTCTTCSEEECCS---SCCCCCGGGT-----TCTTCSEEECCS-SCCCCCGGGTTCTTCCEEEC
T ss_pred cccccccc------ccchhhhhHHhhhhh---hhhccccccc-----cccccccccccc-ccccCCccccCCCCCCEEEC
Confidence 54443222 446677777777776 2444444321 556777777776 56666666667778888888
Q ss_pred cCCCCCCcCCCCCCCCCcceE
Q 039619 316 CCCPKLQKFPDNGLPTSLLRL 336 (459)
Q Consensus 316 ~~c~~l~~lp~~~l~~sL~~L 336 (459)
++| ++++++.-.-+++|++|
T Consensus 180 s~N-~i~~i~~l~~L~~L~~L 199 (199)
T d2omxa2 180 SSN-KVSDISVLAKLTNLESL 199 (199)
T ss_dssp CSS-CCCCCGGGGGCTTCSEE
T ss_pred CCC-CCCCCccccCCCCCCcC
Confidence 775 46666542224555543
No 18
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.43 E-value=6.1e-13 Score=119.50 Aligned_cols=184 Identities=16% Similarity=0.172 Sum_probs=138.0
Q ss_pred eeEEEEecCCCCccccCCccccccCcEEEeecCCCceeeccccccccccceEEeecccCCccccccCCCCCcccEEeecc
Q 039619 110 VYQLQIIPCPSLTSLWSKSELPATLENIYVDRCSKLAFLSLRGNLSKALKHLYIISCSNLESIAEGLDDNTSLETMEIFI 189 (459)
Q Consensus 110 L~~L~l~~c~~l~~lp~~~~~~~~L~~L~l~~c~~l~~l~~~~~lp~~L~~L~l~~c~~l~~lp~~l~~l~~L~~L~l~~ 189 (459)
|+.|++.+| .+++++ .+..+++|++|+++++ .+..++....+ ++|+.++++++ .++.++ .+..+++|+.+.+++
T Consensus 43 L~~L~l~~~-~i~~l~-~l~~l~~L~~L~ls~n-~i~~~~~l~~l-~~l~~l~~~~n-~~~~i~-~l~~l~~L~~l~l~~ 116 (227)
T d1h6ua2 43 ITTLSAFGT-GVTTIE-GVQYLNNLIGLELKDN-QITDLAPLKNL-TKITELELSGN-PLKNVS-AIAGLQSIKTLDLTS 116 (227)
T ss_dssp CCEEECTTS-CCCCCT-TGGGCTTCCEEECCSS-CCCCCGGGTTC-CSCCEEECCSC-CCSCCG-GGTTCTTCCEEECTT
T ss_pred cCEEECCCC-CCCcch-hHhcCCCCcEeecCCc-eeecccccccc-ccccccccccc-cccccc-ccccccccccccccc
Confidence 666666663 566665 4556679999999885 56666555677 89999999886 456664 477889999999988
Q ss_pred ccCcccCcccCCCCCCccEEeeccCCCCccccCCCCCCCccEEEEecCcccccccccCCCCCCCCCccCEEEEeCCcCCC
Q 039619 190 CQNLKALPNGLRNLTSLQYLLIQDCPTIGSFTANCFPTNLASVCIDYEKIYKPLILERGPGLHRFTSVRLLTLFGGECCG 269 (459)
Q Consensus 190 c~~l~~lp~~l~~l~~L~~L~l~~c~~l~~lp~~~~~~~L~~L~l~~~~l~~~~~~~~~~~l~~l~~L~~L~l~~~~c~~ 269 (459)
+... .+ ..+...+.++.+.++++. +........+++|++|++.++.+.... .++++++|++|++++ | .
T Consensus 117 ~~~~-~~-~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~L~~L~l~~n~~~~~~------~l~~l~~L~~L~Ls~--n-~ 184 (227)
T d1h6ua2 117 TQIT-DV-TPLAGLSNLQVLYLDLNQ-ITNISPLAGLTNLQYLSIGNAQVSDLT------PLANLSKLTTLKADD--N-K 184 (227)
T ss_dssp SCCC-CC-GGGTTCTTCCEEECCSSC-CCCCGGGGGCTTCCEEECCSSCCCCCG------GGTTCTTCCEEECCS--S-C
T ss_pred cccc-cc-chhccccchhhhhchhhh-hchhhhhccccccccccccccccccch------hhcccccceecccCC--C-c
Confidence 7543 33 235567888999987754 333333345788999999998776554 678999999999998 3 6
Q ss_pred ceecCCCCCCCccCCCCcceEEeecCCCCCccCCCCCCCCCCEEeccC
Q 039619 270 VVSFPPEKDTGKALPASLKHLSIWNFPNLERISSIENLTSFESLQLCC 317 (459)
Q Consensus 270 l~~l~~~~~~~~~~~~~L~~L~l~~c~~l~~l~~l~~l~~L~~L~l~~ 317 (459)
+..++.-. .+++|++|++++| ++++++.+.++++|+.|++++
T Consensus 185 l~~l~~l~-----~l~~L~~L~Ls~N-~lt~i~~l~~l~~L~~L~lsn 226 (227)
T d1h6ua2 185 ISDISPLA-----SLPNLIEVHLKNN-QISDVSPLANTSNLFIVTLTN 226 (227)
T ss_dssp CCCCGGGG-----GCTTCCEEECTTS-CCCBCGGGTTCTTCCEEEEEE
T ss_pred cCCChhhc-----CCCCCCEEECcCC-cCCCCcccccCCCCCEEEeeC
Confidence 77776422 6789999999994 799988788999999999874
No 19
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.42 E-value=7.4e-13 Score=116.47 Aligned_cols=159 Identities=22% Similarity=0.225 Sum_probs=79.3
Q ss_pred cCcEEEeecCCCceeeccccccccccceEEeecccCCccccccCCCCCcccEEeeccccCcccCcccCCCCCCccEEeec
Q 039619 133 TLENIYVDRCSKLAFLSLRGNLSKALKHLYIISCSNLESIAEGLDDNTSLETMEIFICQNLKALPNGLRNLTSLQYLLIQ 212 (459)
Q Consensus 133 ~L~~L~l~~c~~l~~l~~~~~lp~~L~~L~l~~c~~l~~lp~~l~~l~~L~~L~l~~c~~l~~lp~~l~~l~~L~~L~l~ 212 (459)
++++|+++++ .++++.....+ ++|++|+++++ .++.++. +..+++|++|+++++ .+..++ .+..+++|+.|+++
T Consensus 41 ~l~~L~l~~~-~i~~l~~l~~l-~nL~~L~Ls~N-~l~~~~~-l~~l~~L~~L~l~~n-~~~~~~-~l~~l~~L~~L~l~ 114 (199)
T d2omxa2 41 QVTTLQADRL-GIKSIDGVEYL-NNLTQINFSNN-QLTDITP-LKNLTKLVDILMNNN-QIADIT-PLANLTNLTGLTLF 114 (199)
T ss_dssp TCCEEECTTS-CCCCCTTGGGC-TTCCEEECCSS-CCCCCGG-GTTCTTCCEEECCSS-CCCCCG-GGTTCTTCSEEECC
T ss_pred CCCEEECCCC-CCCCccccccC-CCcCcCccccc-cccCccc-ccCCccccccccccc-cccccc-cccccccccccccc
Confidence 4444444442 23333322334 45555555543 3444432 445555555555554 233332 24455555555554
Q ss_pred cCCCCccccCCCCCCCccEEEEecCcccccccccCCCCCCCCCccCEEEEeCCcCCCceecCCCCCCCccCCCCcceEEe
Q 039619 213 DCPTIGSFTANCFPTNLASVCIDYEKIYKPLILERGPGLHRFTSVRLLTLFGGECCGVVSFPPEKDTGKALPASLKHLSI 292 (459)
Q Consensus 213 ~c~~l~~lp~~~~~~~L~~L~l~~~~l~~~~~~~~~~~l~~l~~L~~L~l~~~~c~~l~~l~~~~~~~~~~~~~L~~L~l 292 (459)
+|.. ...+....+++|+.|+++++.+.... .+..+++|+.|++.+ +.+..++.-. .+++|++|++
T Consensus 115 ~~~~-~~~~~~~~l~~L~~L~l~~n~l~~~~------~l~~~~~L~~L~l~~---n~l~~l~~l~-----~l~~L~~L~l 179 (199)
T d2omxa2 115 NNQI-TDIDPLKNLTNLNRLELSSNTISDIS------ALSGLTSLQQLNFSS---NQVTDLKPLA-----NLTTLERLDI 179 (199)
T ss_dssp SSCC-CCCGGGTTCTTCSEEECCSSCCCCCG------GGTTCTTCSEEECCS---SCCCCCGGGT-----TCTTCCEEEC
T ss_pred cccc-ccccccchhhhhHHhhhhhhhhcccc------ccccccccccccccc---ccccCCcccc-----CCCCCCEEEC
Confidence 4432 22222233455555555555444322 456667777777766 3444444321 5567777777
Q ss_pred ecCCCCCccCCCCCCCCCCEE
Q 039619 293 WNFPNLERISSIENLTSFESL 313 (459)
Q Consensus 293 ~~c~~l~~l~~l~~l~~L~~L 313 (459)
++ +.+++++.+..+++|++|
T Consensus 180 s~-N~i~~i~~l~~L~~L~~L 199 (199)
T d2omxa2 180 SS-NKVSDISVLAKLTNLESL 199 (199)
T ss_dssp CS-SCCCCCGGGGGCTTCSEE
T ss_pred CC-CCCCCCccccCCCCCCcC
Confidence 77 456666655566666654
No 20
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.38 E-value=9.1e-12 Score=112.62 Aligned_cols=198 Identities=18% Similarity=0.195 Sum_probs=132.7
Q ss_pred eeEEEEecCCCCccccCC-ccccccCcEEEeecCCCceeecc--ccccccccceEEeecccCCcccc-ccCCCCCcccEE
Q 039619 110 VYQLQIIPCPSLTSLWSK-SELPATLENIYVDRCSKLAFLSL--RGNLSKALKHLYIISCSNLESIA-EGLDDNTSLETM 185 (459)
Q Consensus 110 L~~L~l~~c~~l~~lp~~-~~~~~~L~~L~l~~c~~l~~l~~--~~~lp~~L~~L~l~~c~~l~~lp-~~l~~l~~L~~L 185 (459)
+++|++++ +.++.+|.. ...+++|++|+++++.....++. ...+ ++++++.+..+..+..++ ..+..+++|++|
T Consensus 31 l~~L~Ls~-n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l-~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l 108 (242)
T d1xwdc1 31 AIELRFVL-TKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNL-PKLHEIRIEKANNLLYINPEAFQNLPNLQYL 108 (242)
T ss_dssp CSEEEEES-CCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESC-TTCCEEEEECCTTCCEECTTSEECCTTCCEE
T ss_pred CCEEECcC-CcCCccChhHhhccchhhhhhhccccccceeeccccccc-ccccccccccccccccccccccccccccccc
Confidence 67777766 467777743 24456999999998766665553 2456 788999988877777664 456889999999
Q ss_pred eeccccCcccCcc--cCCCCCCccEEeeccCCCCccccCCC---CCCCccEEEEecCcccccccccCCCCCCCCCccCEE
Q 039619 186 EIFICQNLKALPN--GLRNLTSLQYLLIQDCPTIGSFTANC---FPTNLASVCIDYEKIYKPLILERGPGLHRFTSVRLL 260 (459)
Q Consensus 186 ~l~~c~~l~~lp~--~l~~l~~L~~L~l~~c~~l~~lp~~~---~~~~L~~L~l~~~~l~~~~~~~~~~~l~~l~~L~~L 260 (459)
++.++ .+...+. .+..++.+..+... +..+..++... ....++.|++.++.++... . .....++++++
T Consensus 109 ~l~~~-~l~~~~~~~~~~~l~~l~~~~~~-n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~~i~--~---~~~~~~~l~~~ 181 (242)
T d1xwdc1 109 LISNT-GIKHLPDVHKIHSLQKVLLDIQD-NINIHTIERNSFVGLSFESVILWLNKNGIQEIH--N---CAFNGTQLDEL 181 (242)
T ss_dssp EEESC-CCCSCCCCTTTCBSSCEEEEEES-CTTCCEECTTSSTTSBSSCEEEECCSSCCCEEC--T---TTTTTCCEEEE
T ss_pred ccchh-hhccccccccccccccccccccc-ccccccccccccccccccceeeecccccccccc--c---ccccchhhhcc
Confidence 99987 4555443 22234444444443 34566665442 3567888999887776432 1 33456677777
Q ss_pred EEeCCcCCCceecCCCCCCCccCCCCcceEEeecCCCCCccC--CCCCCCCCCEEeccCCCCCCcCC
Q 039619 261 TLFGGECCGVVSFPPEKDTGKALPASLKHLSIWNFPNLERIS--SIENLTSFESLQLCCCPKLQKFP 325 (459)
Q Consensus 261 ~l~~~~c~~l~~l~~~~~~~~~~~~~L~~L~l~~c~~l~~l~--~l~~l~~L~~L~l~~c~~l~~lp 325 (459)
.... ++.++.+|... +..+++|++|++++ ++++.+| .+.++++|+.+++. +++.+|
T Consensus 182 ~~l~--~n~l~~l~~~~---f~~l~~L~~L~Ls~-N~l~~l~~~~~~~l~~L~~l~~~---~l~~lp 239 (242)
T d1xwdc1 182 NLSD--NNNLEELPNDV---FHGASGPVILDISR-TRIHSLPSYGLENLKKLRARSTY---NLKKLP 239 (242)
T ss_dssp ECTT--CTTCCCCCTTT---TTTSCCCSEEECTT-SCCCCCCSSSCTTCCEEESSSEE---SSSCSC
T ss_pred cccc--ccccccccHHH---hcCCCCCCEEECCC-CcCCccCHHHHcCCcccccCcCC---CCCcCC
Confidence 6656 57888888753 13578999999999 7899998 56666666666654 455555
No 21
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.38 E-value=1e-14 Score=136.06 Aligned_cols=177 Identities=14% Similarity=0.137 Sum_probs=92.3
Q ss_pred ccCcEEEeecCCCcee-ec-cccccccccceEEeecccCCccccccCCCCCcccEEeeccccCccc--CcccCCCCCCcc
Q 039619 132 ATLENIYVDRCSKLAF-LS-LRGNLSKALKHLYIISCSNLESIAEGLDDNTSLETMEIFICQNLKA--LPNGLRNLTSLQ 207 (459)
Q Consensus 132 ~~L~~L~l~~c~~l~~-l~-~~~~lp~~L~~L~l~~c~~l~~lp~~l~~l~~L~~L~l~~c~~l~~--lp~~l~~l~~L~ 207 (459)
.+|++|++++|..-.. +. ....+ ++|++|++++|..-...+..+..+++|++|++++|..++. +..-...+++|+
T Consensus 46 ~~L~~LdLs~~~i~~~~l~~l~~~c-~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~ 124 (284)
T d2astb2 46 FRVQHMDLSNSVIEVSTLHGILSQC-SKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLD 124 (284)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTB-CCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCC
T ss_pred CCCCEEECCCCccCHHHHHHHHHhC-CCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhcc
Confidence 4778888777632111 11 22455 7788888877743333445566677788888887766642 211224567788
Q ss_pred EEeeccCCCCccccC--C--CCCCCccEEEEec--CcccccccccCCCCCCCCCccCEEEEeCCcCCCcee-cCCCCCCC
Q 039619 208 YLLIQDCPTIGSFTA--N--CFPTNLASVCIDY--EKIYKPLILERGPGLHRFTSVRLLTLFGGECCGVVS-FPPEKDTG 280 (459)
Q Consensus 208 ~L~l~~c~~l~~lp~--~--~~~~~L~~L~l~~--~~l~~~~~~~~~~~l~~l~~L~~L~l~~~~c~~l~~-l~~~~~~~ 280 (459)
+|++++|..+..-.. . ..+++|+.|++++ ..+++..... ...++++|++|++++ |..++. .....
T Consensus 125 ~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~---l~~~~~~L~~L~L~~--~~~itd~~~~~l--- 196 (284)
T d2astb2 125 ELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLST---LVRRCPNLVHLDLSD--SVMLKNDCFQEF--- 196 (284)
T ss_dssp EEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHH---HHHHCTTCSEEECTT--CTTCCGGGGGGG---
T ss_pred ccccccccccccccchhhhcccccccchhhhcccccccccccccc---ccccccccccccccc--ccCCCchhhhhh---
Confidence 888877766543110 0 2245666666655 2232211000 123456666666666 444331 11111
Q ss_pred ccCCCCcceEEeecCCCCCccC--CCCCCCCCCEEeccCC
Q 039619 281 KALPASLKHLSIWNFPNLERIS--SIENLTSFESLQLCCC 318 (459)
Q Consensus 281 ~~~~~~L~~L~l~~c~~l~~l~--~l~~l~~L~~L~l~~c 318 (459)
..+++|++|++++|+.+++-. .+.++++|+.|++.+|
T Consensus 197 -~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 197 -FQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp -GGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred -cccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence 134456666666655554332 3445555666665554
No 22
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.27 E-value=1.4e-13 Score=128.23 Aligned_cols=177 Identities=15% Similarity=0.165 Sum_probs=123.1
Q ss_pred cccceEEeecccCCc-cccccCCCCCcccEEeeccccCcccCcccCCCCCCccEEeeccCCCCccccCC---CCCCCccE
Q 039619 156 KALKHLYIISCSNLE-SIAEGLDDNTSLETMEIFICQNLKALPNGLRNLTSLQYLLIQDCPTIGSFTAN---CFPTNLAS 231 (459)
Q Consensus 156 ~~L~~L~l~~c~~l~-~lp~~l~~l~~L~~L~l~~c~~l~~lp~~l~~l~~L~~L~l~~c~~l~~lp~~---~~~~~L~~ 231 (459)
.+|++|++++|.... .+...+.++++|++|++++|..-...+..+..+++|++|++++|..++..... ..+++|++
T Consensus 46 ~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~ 125 (284)
T d2astb2 46 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDE 125 (284)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCE
T ss_pred CCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhccc
Confidence 789999999875332 23455678999999999999543344456778899999999999887643211 23689999
Q ss_pred EEEec-CcccccccccCCCCC-CCCCccCEEEEeCCcCC-Ccee--cCCCCCCCccCCCCcceEEeecCCCCCccC--CC
Q 039619 232 VCIDY-EKIYKPLILERGPGL-HRFTSVRLLTLFGGECC-GVVS--FPPEKDTGKALPASLKHLSIWNFPNLERIS--SI 304 (459)
Q Consensus 232 L~l~~-~~l~~~~~~~~~~~l-~~l~~L~~L~l~~~~c~-~l~~--l~~~~~~~~~~~~~L~~L~l~~c~~l~~l~--~l 304 (459)
|++++ ..+++..... .+ ...++|+.|++++ |. .+.. +..-. ..+++|++|++++|..++.-. .+
T Consensus 126 L~ls~c~~~~~~~~~~---~~~~~~~~L~~L~l~~--~~~~i~~~~l~~l~----~~~~~L~~L~L~~~~~itd~~~~~l 196 (284)
T d2astb2 126 LNLSWCFDFTEKHVQV---AVAHVSETITQLNLSG--YRKNLQKSDLSTLV----RRCPNLVHLDLSDSVMLKNDCFQEF 196 (284)
T ss_dssp EECCCCTTCCHHHHHH---HHHHSCTTCCEEECCS--CGGGSCHHHHHHHH----HHCTTCSEEECTTCTTCCGGGGGGG
T ss_pred cccccccccccccchh---hhcccccccchhhhcc--cccccccccccccc----cccccccccccccccCCCchhhhhh
Confidence 99998 5554321000 12 2357899999998 53 2221 11111 145789999999998887543 67
Q ss_pred CCCCCCCEEeccCCCCCCcCCCC--CCCCCcceEEeeCC
Q 039619 305 ENLTSFESLQLCCCPKLQKFPDN--GLPTSLLRLEIYGC 341 (459)
Q Consensus 305 ~~l~~L~~L~l~~c~~l~~lp~~--~l~~sL~~L~i~~c 341 (459)
..+++|++|++++|+.+++-.-. +-.++|+.|++.+|
T Consensus 197 ~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 197 FQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp GGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred cccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence 78899999999999887643211 12578999999988
No 23
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.91 E-value=8e-10 Score=88.71 Aligned_cols=73 Identities=23% Similarity=0.299 Sum_probs=35.8
Q ss_pred EEEeecCCCceeeccccccccccceEEeecccCCccccccCCCCCcccEEeeccccCcccCcccCCCCCCccEEeecc
Q 039619 136 NIYVDRCSKLAFLSLRGNLSKALKHLYIISCSNLESIAEGLDDNTSLETMEIFICQNLKALPNGLRNLTSLQYLLIQD 213 (459)
Q Consensus 136 ~L~l~~c~~l~~l~~~~~lp~~L~~L~l~~c~~l~~lp~~l~~l~~L~~L~l~~c~~l~~lp~~l~~l~~L~~L~l~~ 213 (459)
.|++++ ++++.++..+.+ ++|++|++++ +.++.+|+.+..+++|++|+++++ .++.+| ++..+++|++|++++
T Consensus 2 ~L~Ls~-n~l~~l~~l~~l-~~L~~L~ls~-N~l~~lp~~~~~l~~L~~L~l~~N-~i~~l~-~~~~l~~L~~L~l~~ 74 (124)
T d1dcea3 2 VLHLAH-KDLTVLCHLEQL-LLVTHLDLSH-NRLRALPPALAALRCLEVLQASDN-ALENVD-GVANLPRLQELLLCN 74 (124)
T ss_dssp EEECTT-SCCSSCCCGGGG-TTCCEEECCS-SCCCCCCGGGGGCTTCCEEECCSS-CCCCCG-GGTTCSSCCEEECCS
T ss_pred EEEcCC-CCCCCCcccccC-CCCCEEECCC-CccCcchhhhhhhhcccccccccc-cccccC-ccccccccCeEECCC
Confidence 455555 344444433444 5555555554 244555544555555555555553 444443 244555555555544
No 24
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.89 E-value=3.4e-09 Score=84.93 Aligned_cols=95 Identities=20% Similarity=0.231 Sum_probs=40.8
Q ss_pred EEEEecCCCCccccCCccccccCcEEEeecCCCceeecc-ccccccccceEEeecccCCccccccCCCCCcccEEeeccc
Q 039619 112 QLQIIPCPSLTSLWSKSELPATLENIYVDRCSKLAFLSL-RGNLSKALKHLYIISCSNLESIAEGLDDNTSLETMEIFIC 190 (459)
Q Consensus 112 ~L~l~~c~~l~~lp~~~~~~~~L~~L~l~~c~~l~~l~~-~~~lp~~L~~L~l~~c~~l~~lp~~l~~l~~L~~L~l~~c 190 (459)
.|++++ +.++.++ ....+++|++|++++ +.++.+|. .+.+ ++|++|++++ +.++.+| ++..+++|++|+++++
T Consensus 2 ~L~Ls~-n~l~~l~-~l~~l~~L~~L~ls~-N~l~~lp~~~~~l-~~L~~L~l~~-N~i~~l~-~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 2 VLHLAH-KDLTVLC-HLEQLLLVTHLDLSH-NRLRALPPALAAL-RCLEVLQASD-NALENVD-GVANLPRLQELLLCNN 75 (124)
T ss_dssp EEECTT-SCCSSCC-CGGGGTTCCEEECCS-SCCCCCCGGGGGC-TTCCEEECCS-SCCCCCG-GGTTCSSCCEEECCSS
T ss_pred EEEcCC-CCCCCCc-ccccCCCCCEEECCC-CccCcchhhhhhh-hccccccccc-ccccccC-ccccccccCeEECCCC
Confidence 344444 3444444 233333555555544 34444432 2334 4555555554 2344443 2444555555555443
Q ss_pred cCcccCc--ccCCCCCCccEEeecc
Q 039619 191 QNLKALP--NGLRNLTSLQYLLIQD 213 (459)
Q Consensus 191 ~~l~~lp--~~l~~l~~L~~L~l~~ 213 (459)
.+..++ ..+..+++|+.|++++
T Consensus 76 -~i~~~~~~~~l~~~~~L~~L~l~~ 99 (124)
T d1dcea3 76 -RLQQSAAIQPLVSCPRLVLLNLQG 99 (124)
T ss_dssp -CCCSSSTTGGGGGCTTCCEEECTT
T ss_pred -ccCCCCCchhhcCCCCCCEEECCC
Confidence 333332 1233444444444444
No 25
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=98.88 E-value=4.8e-09 Score=90.90 Aligned_cols=107 Identities=14% Similarity=0.186 Sum_probs=56.6
Q ss_pred CCCCccEEEEecCcccccccccCCCCCCCCCccCEEEEeCCcCCCceecCCCCCCCccCCCCcceEEeecCCCCCccC--
Q 039619 225 FPTNLASVCIDYEKIYKPLILERGPGLHRFTSVRLLTLFGGECCGVVSFPPEKDTGKALPASLKHLSIWNFPNLERIS-- 302 (459)
Q Consensus 225 ~~~~L~~L~l~~~~l~~~~~~~~~~~l~~l~~L~~L~l~~~~c~~l~~l~~~~~~~~~~~~~L~~L~l~~c~~l~~l~-- 302 (459)
+++++++|++++|.++... +. ..+.++++|++|++++ +.+..++... ...+++|++|++++ +.++.++
T Consensus 27 lp~~l~~L~Ls~N~i~~~~-~~--~~f~~l~~L~~L~L~~---N~i~~~~~~~---~~~~~~L~~L~Ls~-N~l~~l~~~ 96 (192)
T d1w8aa_ 27 IPLHTTELLLNDNELGRIS-SD--GLFGRLPHLVKLELKR---NQLTGIEPNA---FEGASHIQELQLGE-NKIKEISNK 96 (192)
T ss_dssp CCTTCSEEECCSCCCCSBC-CS--CSGGGCTTCCEEECCS---SCCCCBCTTT---TTTCTTCCEEECCS-CCCCEECSS
T ss_pred CCCCCCEEEeCCCCCcccc-cc--cccCCCceEeeeeccc---cccccccccc---cccccccceeeecc-ccccccCHH
Confidence 3445555555554443211 11 1445566666666665 3343333321 02355666666666 5666665
Q ss_pred CCCCCCCCCEEeccCCCCCCcCCCCCC--CCCcceEEeeCCc
Q 039619 303 SIENLTSFESLQLCCCPKLQKFPDNGL--PTSLLRLEIYGCP 342 (459)
Q Consensus 303 ~l~~l~~L~~L~l~~c~~l~~lp~~~l--~~sL~~L~i~~c~ 342 (459)
.+.++++|++|++++ ++++.++...+ .++|++|++++.+
T Consensus 97 ~F~~l~~L~~L~L~~-N~l~~i~~~~f~~l~~L~~l~L~~N~ 137 (192)
T d1w8aa_ 97 MFLGLHQLKTLNLYD-NQISCVMPGSFEHLNSLTSLNLASNP 137 (192)
T ss_dssp SSTTCTTCCEEECCS-SCCCEECTTSSTTCTTCCEEECTTCC
T ss_pred HHhCCCcccccccCC-ccccccCHHHhcCCcccccccccccc
Confidence 456666666666666 35666655433 4566666666543
No 26
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.82 E-value=8.4e-10 Score=93.03 Aligned_cols=80 Identities=14% Similarity=0.110 Sum_probs=37.9
Q ss_pred CCCCccCEEEEeCCcCCCceecCCCCCCCccCCCCcceEEeecCCCCCccC---CCCCCCCCCEEeccCCCCCCcCCC--
Q 039619 252 HRFTSVRLLTLFGGECCGVVSFPPEKDTGKALPASLKHLSIWNFPNLERIS---SIENLTSFESLQLCCCPKLQKFPD-- 326 (459)
Q Consensus 252 ~~l~~L~~L~l~~~~c~~l~~l~~~~~~~~~~~~~L~~L~l~~c~~l~~l~---~l~~l~~L~~L~l~~c~~l~~lp~-- 326 (459)
..+++|++|++++ +.+..++.... ..+++|+.|++++ +.++.++ .+..+++|++|++++|+ +...+.
T Consensus 60 ~~l~~L~~L~ls~---N~i~~l~~~~~---~~l~~L~~L~L~~-N~i~~~~~l~~l~~l~~L~~L~l~~N~-i~~~~~~r 131 (162)
T d1a9na_ 60 PLLRRLKTLLVNN---NRICRIGEGLD---QALPDLTELILTN-NSLVELGDLDPLASLKSLTYLCILRNP-VTNKKHYR 131 (162)
T ss_dssp CCCSSCCEEECCS---SCCCEECSCHH---HHCTTCCEEECCS-CCCCCGGGGGGGGGCTTCCEEECCSSG-GGGSTTHH
T ss_pred ccCcchhhhhccc---ccccCCCcccc---ccccccccceecc-ccccccccccccccccccchhhcCCCc-cccccchH
Confidence 4444555555554 23444443210 1234555555555 4444443 34556666666666653 444442
Q ss_pred ---CCCCCCcceEEee
Q 039619 327 ---NGLPTSLLRLEIY 339 (459)
Q Consensus 327 ---~~l~~sL~~L~i~ 339 (459)
...+++|+.|+-.
T Consensus 132 ~~~i~~lp~L~~LD~~ 147 (162)
T d1a9na_ 132 LYVIYKVPQVRVLDFQ 147 (162)
T ss_dssp HHHHHHCTTCSEETTE
T ss_pred HHHHHHCCCcCeeCCC
Confidence 0114566666543
No 27
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=98.79 E-value=2.2e-08 Score=86.59 Aligned_cols=122 Identities=16% Similarity=0.151 Sum_probs=66.2
Q ss_pred ceEEeecccCCccccccCCCCCcccEEeeccccCcc-cC-cccCCCCCCccEEeeccCCCCccccCCCCCCCccEEEEec
Q 039619 159 KHLYIISCSNLESIAEGLDDNTSLETMEIFICQNLK-AL-PNGLRNLTSLQYLLIQDCPTIGSFTANCFPTNLASVCIDY 236 (459)
Q Consensus 159 ~~L~l~~c~~l~~lp~~l~~l~~L~~L~l~~c~~l~-~l-p~~l~~l~~L~~L~l~~c~~l~~lp~~~~~~~L~~L~l~~ 236 (459)
+.++.++ ..++++|.++ .+++++|+++++ .+. .+ +..+..+++|+.|+++++. +..++..
T Consensus 11 ~~v~Cs~-~~L~~iP~~l--p~~l~~L~Ls~N-~i~~~~~~~~f~~l~~L~~L~L~~N~-i~~~~~~------------- 72 (192)
T d1w8aa_ 11 TTVDCTG-RGLKEIPRDI--PLHTTELLLNDN-ELGRISSDGLFGRLPHLVKLELKRNQ-LTGIEPN------------- 72 (192)
T ss_dssp TEEECTT-SCCSSCCSCC--CTTCSEEECCSC-CCCSBCCSCSGGGCTTCCEEECCSSC-CCCBCTT-------------
T ss_pred CEEEEeC-CCcCccCCCC--CCCCCEEEeCCC-CCcccccccccCCCceEeeeeccccc-ccccccc-------------
Confidence 4455544 4566677655 256777777775 333 23 2334566777777776543 3333322
Q ss_pred CcccccccccCCCCCCCCCccCEEEEeCCcCCCceecCCCCCCCccCCCCcceEEeecCCCCCccC--CCCCCCCCCEEe
Q 039619 237 EKIYKPLILERGPGLHRFTSVRLLTLFGGECCGVVSFPPEKDTGKALPASLKHLSIWNFPNLERIS--SIENLTSFESLQ 314 (459)
Q Consensus 237 ~~l~~~~~~~~~~~l~~l~~L~~L~l~~~~c~~l~~l~~~~~~~~~~~~~L~~L~l~~c~~l~~l~--~l~~l~~L~~L~ 314 (459)
.+..+++|++|++++ +.+..++... +..+++|++|++++ +.++.++ .+..+++|++|+
T Consensus 73 -------------~~~~~~~L~~L~Ls~---N~l~~l~~~~---F~~l~~L~~L~L~~-N~l~~i~~~~f~~l~~L~~l~ 132 (192)
T d1w8aa_ 73 -------------AFEGASHIQELQLGE---NKIKEISNKM---FLGLHQLKTLNLYD-NQISCVMPGSFEHLNSLTSLN 132 (192)
T ss_dssp -------------TTTTCTTCCEEECCS---CCCCEECSSS---STTCTTCCEEECCS-SCCCEECTTSSTTCTTCCEEE
T ss_pred -------------ccccccccceeeecc---ccccccCHHH---HhCCCcccccccCC-ccccccCHHHhcCCccccccc
Confidence 344555555555555 3455554432 02345556666665 5565555 455666666666
Q ss_pred ccCC
Q 039619 315 LCCC 318 (459)
Q Consensus 315 l~~c 318 (459)
++++
T Consensus 133 L~~N 136 (192)
T d1w8aa_ 133 LASN 136 (192)
T ss_dssp CTTC
T ss_pred cccc
Confidence 6664
No 28
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.77 E-value=3.1e-09 Score=89.48 Aligned_cols=100 Identities=21% Similarity=0.183 Sum_probs=50.9
Q ss_pred eeEEEEecCCCCccccCCccccccCcEEEeecCCCceeeccccccccccceEEeecccCCccccccC-CCCCcccEEeec
Q 039619 110 VYQLQIIPCPSLTSLWSKSELPATLENIYVDRCSKLAFLSLRGNLSKALKHLYIISCSNLESIAEGL-DDNTSLETMEIF 188 (459)
Q Consensus 110 L~~L~l~~c~~l~~lp~~~~~~~~L~~L~l~~c~~l~~l~~~~~lp~~L~~L~l~~c~~l~~lp~~l-~~l~~L~~L~l~ 188 (459)
+++|++++ +.++.++.....+++|+.|+++++ .++.++....+ ++|++|++++| .+..++..+ ..+++|++|+++
T Consensus 20 lr~L~L~~-n~I~~i~~~~~~l~~L~~L~Ls~N-~i~~l~~~~~l-~~L~~L~ls~N-~i~~l~~~~~~~l~~L~~L~L~ 95 (162)
T d1a9na_ 20 DRELDLRG-YKIPVIENLGATLDQFDAIDFSDN-EIRKLDGFPLL-RRLKTLLVNNN-RICRIGEGLDQALPDLTELILT 95 (162)
T ss_dssp CEEEECTT-SCCCSCCCGGGGTTCCSEEECCSS-CCCEECCCCCC-SSCCEEECCSS-CCCEECSCHHHHCTTCCEEECC
T ss_pred CcEEECCC-CCCCccCccccccccCCEEECCCC-CCCccCCcccC-cchhhhhcccc-cccCCCccccccccccccceec
Confidence 44555544 345555433333446666666663 45555444445 56666666654 345554432 345666666666
Q ss_pred cccCcccCcc--cCCCCCCccEEeeccC
Q 039619 189 ICQNLKALPN--GLRNLTSLQYLLIQDC 214 (459)
Q Consensus 189 ~c~~l~~lp~--~l~~l~~L~~L~l~~c 214 (459)
++ .+..++. .+..+++|++|++++|
T Consensus 96 ~N-~i~~~~~l~~l~~l~~L~~L~l~~N 122 (162)
T d1a9na_ 96 NN-SLVELGDLDPLASLKSLTYLCILRN 122 (162)
T ss_dssp SC-CCCCGGGGGGGGGCTTCCEEECCSS
T ss_pred cc-cccccccccccccccccchhhcCCC
Confidence 55 3333332 3445555666666554
No 29
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.53 E-value=1.5e-10 Score=101.22 Aligned_cols=69 Identities=16% Similarity=0.279 Sum_probs=34.3
Q ss_pred CccccccCCCCCcccEEeeccccCcccCcccCCCCCCccEEeeccCCCCccccCC-CCCCCccEEEEecCccc
Q 039619 169 LESIAEGLDDNTSLETMEIFICQNLKALPNGLRNLTSLQYLLIQDCPTIGSFTAN-CFPTNLASVCIDYEKIY 240 (459)
Q Consensus 169 l~~lp~~l~~l~~L~~L~l~~c~~l~~lp~~l~~l~~L~~L~l~~c~~l~~lp~~-~~~~~L~~L~l~~~~l~ 240 (459)
++.++..+..+++|++|+++++ .++.++ .+..+++|+.|++++| .++.++.. ..+++|++|++++|.++
T Consensus 37 i~~l~~sl~~L~~L~~L~Ls~n-~I~~i~-~l~~l~~L~~L~Ls~N-~i~~i~~~~~~~~~L~~L~l~~N~i~ 106 (198)
T d1m9la_ 37 IEKMDATLSTLKACKHLALSTN-NIEKIS-SLSGMENLRILSLGRN-LIKKIENLDAVADTLEELWISYNQIA 106 (198)
T ss_dssp CCCCHHHHHHTTTCCEEECSEE-EESCCC-CHHHHTTCCEEECCEE-EECSCSSHHHHHHHCCEEECSEEECC
T ss_pred hhhhhhHHhcccccceeECccc-CCCCcc-cccCCccccChhhccc-cccccccccccccccccccccccccc
Confidence 4444445555666666666654 344543 3555566666666554 34444322 12334455555444443
No 30
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.39 E-value=1.5e-09 Score=94.67 Aligned_cols=31 Identities=10% Similarity=0.138 Sum_probs=12.2
Q ss_pred cCcEEEeecCCCceeeccccccccccceEEeec
Q 039619 133 TLENIYVDRCSKLAFLSLRGNLSKALKHLYIIS 165 (459)
Q Consensus 133 ~L~~L~l~~c~~l~~l~~~~~lp~~L~~L~l~~ 165 (459)
+|++|+++++ .++.++....+ ++|++|++++
T Consensus 49 ~L~~L~Ls~n-~I~~i~~l~~l-~~L~~L~Ls~ 79 (198)
T d1m9la_ 49 ACKHLALSTN-NIEKISSLSGM-ENLRILSLGR 79 (198)
T ss_dssp TCCEEECSEE-EESCCCCHHHH-TTCCEEECCE
T ss_pred ccceeECccc-CCCCcccccCC-ccccChhhcc
Confidence 4444444432 23333322233 4444444444
No 31
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.36 E-value=7.5e-07 Score=73.87 Aligned_cols=27 Identities=15% Similarity=0.150 Sum_probs=12.9
Q ss_pred cCcccCCCCCCccEEeeccCCCCcccc
Q 039619 195 ALPNGLRNLTSLQYLLIQDCPTIGSFT 221 (459)
Q Consensus 195 ~lp~~l~~l~~L~~L~l~~c~~l~~lp 221 (459)
..|..+..+++|++|++.+.+.++.++
T Consensus 22 ~~p~~l~~l~~l~~L~l~~n~~l~~i~ 48 (156)
T d2ifga3 22 DSLHHLPGAENLTELYIENQQHLQHLE 48 (156)
T ss_dssp TTTTTSCSCSCCSEEECCSCSSCCEEC
T ss_pred cCcccccCccccCeeecCCCccccccC
Confidence 344444445555555554444444443
No 32
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.28 E-value=1.4e-06 Score=72.09 Aligned_cols=86 Identities=16% Similarity=0.138 Sum_probs=49.3
Q ss_pred CCCCCCccCEEEEeCCcCCCceecCCCCCCCccCCCCcceEEeecCCCCCccC--CCCCCCCCCEEeccCCCCCCcCCCC
Q 039619 250 GLHRFTSVRLLTLFGGECCGVVSFPPEKDTGKALPASLKHLSIWNFPNLERIS--SIENLTSFESLQLCCCPKLQKFPDN 327 (459)
Q Consensus 250 ~l~~l~~L~~L~l~~~~c~~l~~l~~~~~~~~~~~~~L~~L~l~~c~~l~~l~--~l~~l~~L~~L~l~~c~~l~~lp~~ 327 (459)
.+..+++|++|++.+ .+.++.++... +..+++|+.|++++ ++++.++ .+..+++|++|++++ ++++.+|..
T Consensus 26 ~l~~l~~l~~L~l~~--n~~l~~i~~~~---f~~l~~L~~L~Ls~-N~l~~i~~~~f~~l~~L~~L~Ls~-N~l~~l~~~ 98 (156)
T d2ifga3 26 HLPGAENLTELYIEN--QQHLQHLELRD---LRGLGELRNLTIVK-SGLRFVAPDAFHFTPRLSRLNLSF-NALESLSWK 98 (156)
T ss_dssp TSCSCSCCSEEECCS--CSSCCEECGGG---SCSCCCCSEEECCS-SCCCEECTTGGGSCSCCCEEECCS-SCCSCCCST
T ss_pred cccCccccCeeecCC--CccccccCchh---hccccccCcceeec-cccCCcccccccccccccceeccC-CCCcccChh
Confidence 345556666666655 34455555431 02355666666666 5666665 456666777777766 456666654
Q ss_pred CC-CCCcceEEeeCCc
Q 039619 328 GL-PTSLLRLEIYGCP 342 (459)
Q Consensus 328 ~l-~~sL~~L~i~~c~ 342 (459)
.+ ..+|+.|++++.|
T Consensus 99 ~~~~~~l~~L~L~~Np 114 (156)
T d2ifga3 99 TVQGLSLQELVLSGNP 114 (156)
T ss_dssp TTCSCCCCEEECCSSC
T ss_pred hhccccccccccCCCc
Confidence 33 3456677776654
No 33
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=97.22 E-value=9.6e-06 Score=76.04 Aligned_cols=13 Identities=23% Similarity=0.445 Sum_probs=5.8
Q ss_pred CCCCCCEEeccCC
Q 039619 306 NLTSFESLQLCCC 318 (459)
Q Consensus 306 ~l~~L~~L~l~~c 318 (459)
.+++|++|++++|
T Consensus 241 ~~~~L~~L~Ls~n 253 (344)
T d2ca6a1 241 SWPNLRELGLNDC 253 (344)
T ss_dssp GCTTCCEEECTTC
T ss_pred ccccchhhhhhcC
Confidence 3444444444443
No 34
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=96.81 E-value=3.9e-05 Score=71.72 Aligned_cols=217 Identities=14% Similarity=0.084 Sum_probs=126.3
Q ss_pred eeEEEEecCCCCc-----cccCCccccccCcEEEeecCCCc--e-eec--------cccccccccceEEeecccCCcc--
Q 039619 110 VYQLQIIPCPSLT-----SLWSKSELPATLENIYVDRCSKL--A-FLS--------LRGNLSKALKHLYIISCSNLES-- 171 (459)
Q Consensus 110 L~~L~l~~c~~l~-----~lp~~~~~~~~L~~L~l~~c~~l--~-~l~--------~~~~lp~~L~~L~l~~c~~l~~-- 171 (459)
|++|+|+++ .+. .+.......++|+.|+++++..- . ..+ ..... ++|++|++++|. +..
T Consensus 33 l~~L~Ls~n-~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~-~~L~~L~L~~n~-i~~~~ 109 (344)
T d2ca6a1 33 VKEIVLSGN-TIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKC-PKLHTVRLSDNA-FGPTA 109 (344)
T ss_dssp CCEEECTTS-EECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTC-TTCCEEECCSCC-CCTTT
T ss_pred CCEEECcCC-cCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhC-CCcccccccccc-ccccc
Confidence 889999874 332 22223344568999999875321 1 111 01334 789999999864 322
Q ss_pred ---ccccCCCCCcccEEeeccccCccc-----Ccc---------cCCCCCCccEEeeccCCCCcc-----ccCC-CCCCC
Q 039619 172 ---IAEGLDDNTSLETMEIFICQNLKA-----LPN---------GLRNLTSLQYLLIQDCPTIGS-----FTAN-CFPTN 228 (459)
Q Consensus 172 ---lp~~l~~l~~L~~L~l~~c~~l~~-----lp~---------~l~~l~~L~~L~l~~c~~l~~-----lp~~-~~~~~ 228 (459)
+...+...++|++|++++|. +.. +.. .....+.|+.+.++++ .+.. +... ...++
T Consensus 110 ~~~l~~~l~~~~~L~~L~l~~n~-l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n-~i~~~~~~~l~~~l~~~~~ 187 (344)
T d2ca6a1 110 QEPLIDFLSKHTPLEHLYLHNNG-LGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRN-RLENGSMKEWAKTFQSHRL 187 (344)
T ss_dssp HHHHHHHHHHCTTCCEEECCSSC-CHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSS-CCTGGGHHHHHHHHHHCTT
T ss_pred ccchhhhhcccccchheeccccc-ccccccccccccccccccccccccCcccceeecccc-cccccccccccchhhhhhh
Confidence 34445567899999998873 221 000 1134567888988764 3322 1111 23578
Q ss_pred ccEEEEecCcccccc----cccCCCCCCCCCccCEEEEeCCcCCC----ceecCCCCCCCccCCCCcceEEeecCCCCCc
Q 039619 229 LASVCIDYEKIYKPL----ILERGPGLHRFTSVRLLTLFGGECCG----VVSFPPEKDTGKALPASLKHLSIWNFPNLER 300 (459)
Q Consensus 229 L~~L~l~~~~l~~~~----~~~~~~~l~~l~~L~~L~l~~~~c~~----l~~l~~~~~~~~~~~~~L~~L~l~~c~~l~~ 300 (459)
|++|+++++.+.... ..+ .+..+++|+.|++++ +.- ...+.... ...++|++|++++| .+..
T Consensus 188 L~~L~L~~n~i~~~g~~~~l~~---~l~~~~~L~~L~Ls~--N~i~~~g~~~L~~~l----~~~~~L~~L~Ls~n-~i~~ 257 (344)
T d2ca6a1 188 LHTVKMVQNGIRPEGIEHLLLE---GLAYCQELKVLDLQD--NTFTHLGSSALAIAL----KSWPNLRELGLNDC-LLSA 257 (344)
T ss_dssp CCEEECCSSCCCHHHHHHHHHT---TGGGCTTCCEEECCS--SCCHHHHHHHHHHHG----GGCTTCCEEECTTC-CCCH
T ss_pred hcccccccccccccccccchhh---hhcchhhhccccccc--ccccccccccccccc----cccccchhhhhhcC-ccCc
Confidence 999999887765321 022 456788999999998 321 11122212 24578999999985 5654
Q ss_pred cC------CC--CCCCCCCEEeccCCCCCCcC-----CCC--CCCCCcceEEeeCCc
Q 039619 301 IS------SI--ENLTSFESLQLCCCPKLQKF-----PDN--GLPTSLLRLEIYGCP 342 (459)
Q Consensus 301 l~------~l--~~l~~L~~L~l~~c~~l~~l-----p~~--~l~~sL~~L~i~~c~ 342 (459)
.. .+ ...+.|++|++++| .++.- ... .-.++|++|+++++.
T Consensus 258 ~g~~~l~~~l~~~~~~~L~~L~ls~N-~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~ 313 (344)
T d2ca6a1 258 RGAAAVVDAFSKLENIGLQTLRLQYN-EIELDAVRTLKTVIDEKMPDLLFLELNGNR 313 (344)
T ss_dssp HHHHHHHHHHHTCSSCCCCEEECCSS-CCBHHHHHHHHHHHHHHCTTCCEEECTTSB
T ss_pred hhhHHHHHHhhhccCCCCCEEECCCC-cCChHHHHHHHHHHHccCCCCCEEECCCCc
Confidence 32 22 23467899999885 34321 110 014578888887754
No 35
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.65 E-value=0.00014 Score=59.95 Aligned_cols=34 Identities=15% Similarity=0.133 Sum_probs=15.0
Q ss_pred CCcccEEeeccccCcccCc---ccCCCCCCccEEeecc
Q 039619 179 NTSLETMEIFICQNLKALP---NGLRNLTSLQYLLIQD 213 (459)
Q Consensus 179 l~~L~~L~l~~c~~l~~lp---~~l~~l~~L~~L~l~~ 213 (459)
+++|++|+++++ .++.++ ..+..+++|+.|++++
T Consensus 64 ~~~L~~L~Ls~N-~i~~l~~~~~~~~~l~~L~~L~Ls~ 100 (162)
T d1koha1 64 IPELLSLNLSNN-RLYRLDDMSSIVQKAPNLKILNLSG 100 (162)
T ss_dssp CTTCCCCCCCSS-CCCCCSGGGTHHHHSTTCCCCCCTT
T ss_pred CCCCCEeeCCCc-cccCCchhHHHHhhCCccccccccc
Confidence 445555555554 233221 1223445555555544
No 36
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.60 E-value=0.0012 Score=62.87 Aligned_cols=104 Identities=16% Similarity=0.227 Sum_probs=69.3
Q ss_pred cCcEEEeecCCCceeec---cccccccccceEEeecccCCc-----cccccCCCCCcccEEeeccccCcc-----cCccc
Q 039619 133 TLENIYVDRCSKLAFLS---LRGNLSKALKHLYIISCSNLE-----SIAEGLDDNTSLETMEIFICQNLK-----ALPNG 199 (459)
Q Consensus 133 ~L~~L~l~~c~~l~~l~---~~~~lp~~L~~L~l~~c~~l~-----~lp~~l~~l~~L~~L~l~~c~~l~-----~lp~~ 199 (459)
+|++|++++ +++.... ....+ +++++|++.+|. ++ .+...+..+++|++|+++++ .++ .+...
T Consensus 3 ~l~~ld~~~-~~i~~~~~~~l~~~l-~~l~~L~L~~~~-i~~~~~~~l~~~L~~~~~L~~LdLs~N-~i~~~~~~~l~~~ 78 (460)
T d1z7xw1 3 DIQSLDIQC-EELSDARWAELLPLL-QQCQVVRLDDCG-LTEARCKDISSALRVNPALAELNLRSN-ELGDVGVHCVLQG 78 (460)
T ss_dssp EEEEEEEES-CCCCHHHHHHHHHHH-TTCSEEEEESSC-CCHHHHHHHHHHHHTCTTCCEEECTTC-CCHHHHHHHHHHT
T ss_pred CCCEEEeeC-CcCChHHHHHHHHhC-CCCCEEEeCCCC-CCHHHHHHHHHHHhcCCCCCEEECcCC-cCChHHHHHHHHH
Confidence 789999965 6776643 22456 889999999984 43 33455677899999999887 443 22333
Q ss_pred CC-CCCCccEEeeccCCCCccc-----cC-CCCCCCccEEEEecCcccc
Q 039619 200 LR-NLTSLQYLLIQDCPTIGSF-----TA-NCFPTNLASVCIDYEKIYK 241 (459)
Q Consensus 200 l~-~l~~L~~L~l~~c~~l~~l-----p~-~~~~~~L~~L~l~~~~l~~ 241 (459)
+. ...+|++|++++|. ++.. +. ....++|++|+++++.+..
T Consensus 79 l~~~~~~L~~L~L~~n~-it~~~~~~l~~~l~~~~~L~~L~L~~N~i~~ 126 (460)
T d1z7xw1 79 LQTPSCKIQKLSLQNCC-LTGAGCGVLSSTLRTLPTLQELHLSDNLLGD 126 (460)
T ss_dssp TCSTTCCCCEEECTTSC-CBGGGHHHHHHHTTSCTTCCEEECCSSBCHH
T ss_pred HhcCCCCCCEEECCCCC-ccccccccccchhhccccccccccccccchh
Confidence 33 23579999998874 5432 11 1346788999888876653
No 37
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.35 E-value=0.0036 Score=59.49 Aligned_cols=93 Identities=14% Similarity=0.223 Sum_probs=49.8
Q ss_pred CcCceEEeCCCCCCCCCcc------c----eeEEEEecCCCCcc-----ccCCccccccCcEEEeecCCCceeec---c-
Q 039619 90 TLKDPEVLDCPVCYEPLTI------P----VYQLQIIPCPSLTS-----LWSKSELPATLENIYVDRCSKLAFLS---L- 150 (459)
Q Consensus 90 ~L~~L~l~~c~~l~~l~~l------p----L~~L~l~~c~~l~~-----lp~~~~~~~~L~~L~l~~c~~l~~l~---~- 150 (459)
+|++|++++ +.++.. | +++|+|++|. ++. +.......++|++|+++++ .++... .
T Consensus 3 ~l~~ld~~~----~~i~~~~~~~l~~~l~~l~~L~L~~~~-i~~~~~~~l~~~L~~~~~L~~LdLs~N-~i~~~~~~~l~ 76 (460)
T d1z7xw1 3 DIQSLDIQC----EELSDARWAELLPLLQQCQVVRLDDCG-LTEARCKDISSALRVNPALAELNLRSN-ELGDVGVHCVL 76 (460)
T ss_dssp EEEEEEEES----CCCCHHHHHHHHHHHTTCSEEEEESSC-CCHHHHHHHHHHHHTCTTCCEEECTTC-CCHHHHHHHHH
T ss_pred CCCEEEeeC----CcCChHHHHHHHHhCCCCCEEEeCCCC-CCHHHHHHHHHHHhcCCCCCEEECcCC-cCChHHHHHHH
Confidence 567777766 455432 2 7777777763 431 1211233456777777664 343211 0
Q ss_pred ---ccccccccceEEeecccCCcc-----ccccCCCCCcccEEeeccc
Q 039619 151 ---RGNLSKALKHLYIISCSNLES-----IAEGLDDNTSLETMEIFIC 190 (459)
Q Consensus 151 ---~~~lp~~L~~L~l~~c~~l~~-----lp~~l~~l~~L~~L~l~~c 190 (459)
...- .+|++|++++|. ++. ++..+..+++|++|+++++
T Consensus 77 ~~l~~~~-~~L~~L~L~~n~-it~~~~~~l~~~l~~~~~L~~L~L~~N 122 (460)
T d1z7xw1 77 QGLQTPS-CKIQKLSLQNCC-LTGAGCGVLSSTLRTLPTLQELHLSDN 122 (460)
T ss_dssp HTTCSTT-CCCCEEECTTSC-CBGGGHHHHHHHTTSCTTCCEEECCSS
T ss_pred HHHhcCC-CCCCEEECCCCC-ccccccccccchhhccccccccccccc
Confidence 0111 467777777663 432 2444556677777777665
No 38
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.42 E-value=0.00084 Score=55.07 Aligned_cols=35 Identities=20% Similarity=0.086 Sum_probs=18.3
Q ss_pred CCCcceEEeecCCCCCccC--CCCCCCCCCEEeccCCC
Q 039619 284 PASLKHLSIWNFPNLERIS--SIENLTSFESLQLCCCP 319 (459)
Q Consensus 284 ~~~L~~L~l~~c~~l~~l~--~l~~l~~L~~L~l~~c~ 319 (459)
+++|+.|++++ +.+++++ ......+|+.|++.+++
T Consensus 90 l~~L~~L~Ls~-N~i~~l~~l~~l~~~~L~~L~L~~Np 126 (162)
T d1koha1 90 APNLKILNLSG-NELKSERELDKIKGLKLEELWLDGNS 126 (162)
T ss_dssp STTCCCCCCTT-SCCCCGGGHHHHTTCCCSSCCCTTST
T ss_pred CCccccccccc-CccccchhhhhhhccccceeecCCCC
Confidence 45566666665 5555555 11122346666666643
No 39
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=90.23 E-value=0.023 Score=46.28 Aligned_cols=11 Identities=9% Similarity=-0.242 Sum_probs=5.8
Q ss_pred CCccCEEEEeC
Q 039619 254 FTSVRLLTLFG 264 (459)
Q Consensus 254 l~~L~~L~l~~ 264 (459)
-++|++|+++.
T Consensus 130 n~sL~~l~l~~ 140 (167)
T d1pgva_ 130 NESLLRVGISF 140 (167)
T ss_dssp CSSCCEEECCC
T ss_pred CCCccEeeCcC
Confidence 34555555544
No 40
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=86.55 E-value=0.13 Score=41.46 Aligned_cols=14 Identities=7% Similarity=-0.237 Sum_probs=7.6
Q ss_pred CCCCCccCEEEEeC
Q 039619 251 LHRFTSVRLLTLFG 264 (459)
Q Consensus 251 l~~l~~L~~L~l~~ 264 (459)
+..-++|++|++++
T Consensus 96 L~~n~sL~~L~l~~ 109 (167)
T d1pgva_ 96 TLVTQSIVEFKADN 109 (167)
T ss_dssp TTTTCCCSEEECCC
T ss_pred HHhCCcCCEEECCC
Confidence 44445566666654
No 41
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=81.98 E-value=0.04 Score=44.55 Aligned_cols=12 Identities=8% Similarity=-0.089 Sum_probs=5.4
Q ss_pred CCCccCEEEEeC
Q 039619 253 RFTSVRLLTLFG 264 (459)
Q Consensus 253 ~l~~L~~L~l~~ 264 (459)
..++|++|++..
T Consensus 130 ~n~~L~~L~l~~ 141 (166)
T d1io0a_ 130 KNTTLLKFGYHF 141 (166)
T ss_dssp HCSSCCEEECCC
T ss_pred hCCCcCEEeCcC
Confidence 334455554443
No 42
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=80.31 E-value=0.12 Score=41.44 Aligned_cols=80 Identities=23% Similarity=0.237 Sum_probs=36.5
Q ss_pred ccCcEEEeecCCCceeecc---c---cccccccceEEeecccCCcc-----ccccCCCCCcccEEeeccccCc----ccC
Q 039619 132 ATLENIYVDRCSKLAFLSL---R---GNLSKALKHLYIISCSNLES-----IAEGLDDNTSLETMEIFICQNL----KAL 196 (459)
Q Consensus 132 ~~L~~L~l~~c~~l~~l~~---~---~~lp~~L~~L~l~~c~~l~~-----lp~~l~~l~~L~~L~l~~c~~l----~~l 196 (459)
++|++|+++++..+..-.. . ... ++|++|++++|. +.. +-..+...++++.+++++|..- ..+
T Consensus 17 ~~L~~L~L~~~~~i~~~~~~~l~~al~~n-~~L~~L~Ls~n~-l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l 94 (166)
T d1io0a_ 17 PDLEEVNLNNIMNIPVPTLKACAEALKTN-TYVKKFSIVGTR-SNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILAL 94 (166)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTC-CSCCEEECTTSC-CCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHH
T ss_pred CCCcEEEcCCCCCCCHHHHHHHHHHHhcC-CccCeeeccCCc-ccHHHHHHHHHHHhhcccchhhhhccccccchhHHHH
Confidence 3566666655443332210 0 223 556666666652 211 1222334456666666655221 122
Q ss_pred cccCCCCCCccEEeecc
Q 039619 197 PNGLRNLTSLQYLLIQD 213 (459)
Q Consensus 197 p~~l~~l~~L~~L~l~~ 213 (459)
...+...++|+.++|+.
T Consensus 95 ~~~l~~~~~L~~l~L~l 111 (166)
T d1io0a_ 95 VEALQSNTSLIELRIDN 111 (166)
T ss_dssp HHGGGGCSSCCEEECCC
T ss_pred HHHHHhCccccEEeecc
Confidence 23444556666655543
Done!