Your job contains 1 sequence.
>039624
MAEPVQQQDILPWLKTLPVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKIVPPVPPPP
KKTAITFLNRSLAQRAAATGGATSSSGPTFTTRQQQIGFCPRKPRPVQKPVWQSGEYYTF
QEFETKAKNFEKSYLKKCGNKKAALSALEIESLYWKASVDKPFSVEYANDMPGSAFVPVR
KIREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAED
HDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPE
VFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAAIRRA
SINYPPMVSHFQLLYDLAIAMHSSIPVAVSAKPRSSRLKDKNKDEGETLVKELFVQDVAQ
NNELLHVLGQGSPIVLLPQSSSGALGANPWIPLGLCSYREAIKSSG
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 039624
(466 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:504955644 - symbol:REF6 "relative of early flo... 1710 4.6e-176 1
TAIR|locus:2146653 - symbol:ELF6 "EARLY FLOWERING 6" spec... 814 2.4e-110 2
TAIR|locus:2044697 - symbol:MEE27 "maternal effect embryo... 446 1.9e-49 2
DICTYBASE|DDB_G0268778 - symbol:rbbB "putative Retinoblas... 436 7.3e-48 2
TAIR|locus:2128659 - symbol:JMJ14 "JUMONJI 14" species:37... 437 8.7e-48 2
TAIR|locus:2196979 - symbol:JMJ18 "Jumonji domain-contain... 427 3.4e-47 2
POMBASE|SPAC1002.05c - symbol:jmj2 "histone demethylase J... 423 5.1e-47 2
UNIPROTKB|G4N2P7 - symbol:MGG_04878 "Lid2 complex compone... 424 1.5e-46 2
ASPGD|ASPL0000010243 - symbol:AN8211 species:162425 "Emer... 425 4.6e-46 2
TAIR|locus:2025635 - symbol:PKDM7D species:3702 "Arabidop... 413 1.2e-44 2
UNIPROTKB|F1MQ59 - symbol:KDM5A "Uncharacterized protein"... 411 2.4e-44 3
UNIPROTKB|F5H1F7 - symbol:KDM5A "Lysine-specific demethyl... 410 3.3e-44 3
UNIPROTKB|P29375 - symbol:KDM5A "Lysine-specific demethyl... 410 3.8e-44 3
UNIPROTKB|F1Q4J4 - symbol:KDM5A "Uncharacterized protein"... 409 4.8e-44 3
UNIPROTKB|F1NN75 - symbol:KDM5A "Uncharacterized protein"... 406 5.0e-44 3
UNIPROTKB|B4E1Y0 - symbol:KDM5D "Lysine-specific demethyl... 393 1.7e-43 2
RGD|1305429 - symbol:Kdm5a "lysine (K)-specific demethyla... 408 8.3e-43 2
UNIPROTKB|E9PSW7 - symbol:Jarid1a "Protein Jarid1a" speci... 408 8.3e-43 2
FB|FBgn0031759 - symbol:lid "little imaginal discs" speci... 407 1.1e-42 2
UNIPROTKB|E9PFH2 - symbol:KDM5D "Lysine-specific demethyl... 393 1.2e-42 2
UNIPROTKB|Q9BY66 - symbol:KDM5D "Lysine-specific demethyl... 393 1.4e-42 2
UNIPROTKB|E9PSM3 - symbol:Jarid1a "Protein Jarid1a" speci... 408 3.6e-42 2
MGI|MGI:2136980 - symbol:Kdm5a "lysine (K)-specific demet... 407 4.5e-42 2
MGI|MGI:99780 - symbol:Kdm5d "lysine (K)-specific demethy... 390 7.5e-42 2
UNIPROTKB|Q30DN6 - symbol:KDM5D "Lysine-specific demethyl... 388 7.5e-42 2
UNIPROTKB|A1YVX4 - symbol:KDM5C "Lysine-specific demethyl... 386 1.9e-41 2
UNIPROTKB|F1RUI7 - symbol:KDM5C "Lysine-specific demethyl... 386 1.9e-41 2
UNIPROTKB|E2R0S2 - symbol:KDM5C "Lysine-specific demethyl... 386 1.9e-41 2
MGI|MGI:99781 - symbol:Kdm5c "lysine (K)-specific demethy... 386 2.0e-41 2
UNIPROTKB|F1MYV2 - symbol:KDM5C "Uncharacterized protein"... 386 2.0e-41 2
UNIPROTKB|Q38JA7 - symbol:KDM5C "Lysine-specific demethyl... 386 2.0e-41 2
UNIPROTKB|B0QZ44 - symbol:KDM5C "Smcy homolog, X-linked (... 386 2.0e-41 2
UNIPROTKB|P41229 - symbol:KDM5C "Lysine-specific demethyl... 386 2.1e-41 2
UNIPROTKB|K7GNM7 - symbol:KDM5C "Lysine-specific demethyl... 386 2.1e-41 2
ZFIN|ZDB-GENE-060810-94 - symbol:kdm5c "lysine (K)-specif... 392 2.7e-41 2
UNIPROTKB|D4A3B4 - symbol:D4A3B4 "Uncharacterized protein... 379 9.9e-41 2
WB|WBGene00004319 - symbol:rbr-2 species:6239 "Caenorhabd... 371 2.6e-40 2
UNIPROTKB|Q23541 - symbol:rbr-2 "Lysine-specific demethyl... 371 2.6e-40 2
ZFIN|ZDB-GENE-030131-5379 - symbol:kdm5ba "lysine (K)-spe... 385 8.5e-40 2
UNIPROTKB|Q5F3R2 - symbol:KDM5B "Lysine-specific demethyl... 371 2.5e-39 2
ZFIN|ZDB-GENE-030424-1 - symbol:kdm5bb "lysine (K)-specif... 374 3.2e-39 2
CGD|CAL0000662 - symbol:orf19.5651 species:5476 "Candida ... 381 4.0e-39 2
UNIPROTKB|Q9UGL1 - symbol:KDM5B "Lysine-specific demethyl... 369 4.2e-39 2
MGI|MGI:1922855 - symbol:Kdm5b "lysine (K)-specific demet... 369 4.2e-39 2
RGD|1565602 - symbol:Kdm5b "lysine (K)-specific demethyla... 369 4.3e-39 2
UNIPROTKB|E7EV89 - symbol:KDM5A "Lysine-specific demethyl... 358 2.6e-38 2
UNIPROTKB|F1S4N3 - symbol:KDM5B "Uncharacterized protein"... 365 4.7e-38 2
UNIPROTKB|F1NRC4 - symbol:KDM5B "Lysine-specific demethyl... 371 1.0e-36 2
UNIPROTKB|F1NUR9 - symbol:KDM5B "Lysine-specific demethyl... 371 1.0e-36 2
UNIPROTKB|I3L8V3 - symbol:KDM5A "Uncharacterized protein"... 386 1.6e-35 1
TAIR|locus:2031290 - symbol:AT1G63490 species:3702 "Arabi... 391 4.8e-35 1
UNIPROTKB|Q6B0I6 - symbol:KDM4D "Lysine-specific demethyl... 341 7.7e-35 2
MGI|MGI:3606484 - symbol:Kdm4d "lysine (K)-specific demet... 341 4.2e-34 2
UNIPROTKB|B2RXH2 - symbol:KDM4E "Lysine-specific demethyl... 333 4.3e-34 2
RGD|1591045 - symbol:Kdm4d "lysine (K)-specific demethyla... 334 3.3e-33 2
UNIPROTKB|B3KV94 - symbol:JARID1B "cDNA FLJ16281 fis, clo... 369 1.4e-32 1
ZFIN|ZDB-GENE-030131-6279 - symbol:kdm4ab "lysine (K)-spe... 335 1.7e-32 2
ZFIN|ZDB-GENE-070705-160 - symbol:si:ch211-262l3.1 "si:ch... 335 1.7e-32 2
UNIPROTKB|F1PJS3 - symbol:KDM5B "Uncharacterized protein"... 369 1.7e-32 1
UNIPROTKB|F1MUR2 - symbol:KDM5B "Uncharacterized protein"... 367 2.8e-32 1
UNIPROTKB|Q9U297 - symbol:jmjd-2 "Lysine-specific demethy... 332 4.0e-32 2
ZFIN|ZDB-GENE-120215-3 - symbol:si:ch211-215f22.3 "si:ch2... 330 8.8e-31 2
UNIPROTKB|F1SMN9 - symbol:F1SMN9 "Uncharacterized protein... 327 5.2e-30 2
RGD|1307528 - symbol:Kdm4c "lysine (K)-specific demethyla... 325 8.3e-30 2
MGI|MGI:1924054 - symbol:Kdm4c "lysine (K)-specific demet... 325 8.4e-30 2
UNIPROTKB|Q9H3R0 - symbol:KDM4C "Lysine-specific demethyl... 325 8.4e-30 2
UNIPROTKB|E1C6D5 - symbol:KDM4A "Uncharacterized protein"... 317 1.5e-29 3
UNIPROTKB|O94953 - symbol:KDM4B "Lysine-specific demethyl... 317 2.7e-29 3
UNIPROTKB|F5GX28 - symbol:KDM4B "Lysine-specific demethyl... 317 3.2e-29 3
UNIPROTKB|E1BX38 - symbol:Gga.52669 "Uncharacterized prot... 322 4.5e-29 2
MGI|MGI:2446210 - symbol:Kdm4a "lysine (K)-specific demet... 321 5.0e-29 2
UNIPROTKB|E2RFE0 - symbol:KDM4A "Uncharacterized protein"... 321 1.0e-28 2
FB|FBgn0036004 - symbol:Jarid2 "Jumonji, AT rich interact... 305 1.0e-28 2
FB|FBgn0053182 - symbol:Kdm4B "Histone demethylase 4B" sp... 317 1.1e-28 2
UNIPROTKB|O75164 - symbol:KDM4A "Lysine-specific demethyl... 318 3.3e-28 2
UNIPROTKB|Q5RD88 - symbol:KDM4A "Lysine-specific demethyl... 318 3.3e-28 2
UNIPROTKB|E1BPL5 - symbol:KDM4A "Uncharacterized protein"... 318 3.3e-28 2
UNIPROTKB|E1BA41 - symbol:KDM4B "Uncharacterized protein"... 317 4.6e-28 2
UNIPROTKB|E2R243 - symbol:KDM4B "Uncharacterized protein"... 317 4.8e-28 2
MGI|MGI:2442355 - symbol:Kdm4b "lysine (K)-specific demet... 317 5.3e-28 2
UNIPROTKB|F1PHR7 - symbol:KDM4C "Uncharacterized protein"... 323 2.4e-27 1
RGD|1306378 - symbol:Kdm4a "lysine (K)-specific demethyla... 321 5.7e-27 1
FB|FBgn0033233 - symbol:Kdm4A "Histone demethylase 4A" sp... 302 7.1e-27 2
ZFIN|ZDB-GENE-060503-664 - symbol:kdm4b "lysine (K)-speci... 314 9.9e-27 2
UNIPROTKB|F1N9S1 - symbol:F1N9S1 "Uncharacterized protein... 318 2.3e-26 1
ZFIN|ZDB-GENE-070209-38 - symbol:zgc:153957 "zgc:153957" ... 309 7.6e-26 2
SGD|S000000971 - symbol:RPH1 "JmjC domain-containing hist... 293 1.6e-25 3
CGD|CAL0004209 - symbol:orf19.2730 species:5476 "Candida ... 284 4.1e-25 3
UNIPROTKB|Q5AF79 - symbol:RPH2 "Potential jumonji-like tr... 284 4.1e-25 3
ZFIN|ZDB-GENE-060503-246 - symbol:jarid2b "jumonji, AT ri... 281 1.8e-24 2
ASPGD|ASPL0000057825 - symbol:AN1060 species:162425 "Emer... 291 2.3e-24 3
CGD|CAL0004229 - symbol:orf19.2743 species:5476 "Candida ... 283 4.5e-24 2
UNIPROTKB|Q5AFV0 - symbol:RPH1 "Potential jumonji-like tr... 283 4.5e-24 2
MGI|MGI:104813 - symbol:Jarid2 "jumonji, AT rich interact... 273 7.0e-24 2
UNIPROTKB|F5GYH2 - symbol:KDM4C "Lysine-specific demethyl... 293 2.0e-23 1
SGD|S000003880 - symbol:JHD2 "JmjC domain family histone ... 279 2.1e-23 2
UNIPROTKB|F1RUJ7 - symbol:JARID2 "Uncharacterized protein... 267 3.0e-23 2
UNIPROTKB|E7EV17 - symbol:KDM4C "Lysine-specific demethyl... 293 3.4e-23 1
UNIPROTKB|F1P6D5 - symbol:JARID2 "Uncharacterized protein... 266 4.1e-23 2
UNIPROTKB|J9NWC2 - symbol:JARID2 "Uncharacterized protein... 266 4.2e-23 2
WARNING: Descriptions of 17 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:504955644 [details] [associations]
symbol:REF6 "relative of early flowering 6"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=IMP] [GO:0035067 "negative regulation of histone
acetylation" evidence=IMP] [GO:0009741 "response to brassinosteroid
stimulus" evidence=IMP] [GO:0009826 "unidimensional cell growth"
evidence=IMP] [GO:0033169 "histone H3-K9 demethylation"
evidence=IMP] [GO:0048366 "leaf development" evidence=IMP]
InterPro:IPR003347 InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 Pfam:PF02373 PROSITE:PS00028 PROSITE:PS50157
PROSITE:PS51184 SMART:SM00355 SMART:SM00558 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0003676 GO:GO:0009826
GO:GO:0016702 Gene3D:3.30.160.60 GO:GO:0010228 GO:GO:0048366
GO:GO:0033169 GO:GO:0009741 GO:GO:0035067 EMBL:AL049659
InterPro:IPR003349 PROSITE:PS51183 HSSP:P08151 Pfam:PF02375
SMART:SM00545 EMBL:AY664499 IPI:IPI00537359 PIR:T06699
RefSeq:NP_680116.2 UniGene:At.3169 ProteinModelPortal:Q9STM3
SMR:Q9STM3 DIP:DIP-46006N IntAct:Q9STM3 PaxDb:Q9STM3 PRIDE:Q9STM3
EnsemblPlants:AT3G48430.1 GeneID:824002 KEGG:ath:AT3G48430
TAIR:At3g48430 eggNOG:NOG303077 HOGENOM:HOG000082763
InParanoid:Q9STM3 OMA:ELVINHE PhylomeDB:Q9STM3
ProtClustDB:CLSN2918915 Genevestigator:Q9STM3 Uniprot:Q9STM3
Length = 1360
Score = 1710 (607.0 bits), Expect = 4.6e-176, P = 4.6e-176
Identities = 327/452 (72%), Positives = 370/452 (81%)
Query: 1 MAEPVQQQDILPWLKTLPVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKIXXXXXXXX 60
MA Q QD+ PWLK+LPVAPEF PTLAEFQDPIAYI KIE+EAS+YGICKI
Sbjct: 1 MAVSEQSQDVFPWLKSLPVAPEFRPTLAEFQDPIAYILKIEEEASRYGICKILPPLPPPS 60
Query: 61 KKTAITFLNRSLAQRXXXXXXXXXXXXX------XXXXRQQQIGFCPRKPRPVQKPVWQS 114
KKT+I+ LNRSLA R RQQQIGFCPRK RPVQ+PVWQS
Sbjct: 61 KKTSISNLNRSLAARAAARVRDGGFGACDYDGGPTFATRQQQIGFCPRKQRPVQRPVWQS 120
Query: 115 GEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALEIESLYWKASVDKPFSVEYANDMPGS 174
GE Y+F EFE KAKNFEK+YLKKCG KK+ LSALEIE+LYW+A+VDKPFSVEYANDMPGS
Sbjct: 121 GEEYSFGEFEFKAKNFEKNYLKKCG-KKSQLSALEIETLYWRATVDKPFSVEYANDMPGS 179
Query: 175 AFVPVR----KIREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAML 230
AF+P+ + RE+ GEG TVGET WNMR +SRA+GSLL+FMKEEIPGVTSPMVY+AM+
Sbjct: 180 AFIPLSLAAARRRESGGEGGTVGETAWNMRAMSRAEGSLLKFMKEEIPGVTSPMVYVAMM 239
Query: 231 FSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATL 290
FSWFAWH EDHDLHSLNYLHMGA KTWYGVP +AA AFEEVVRVHGYGEE+NPLVTF+TL
Sbjct: 240 FSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPKDAALAFEEVVRVHGYGEELNPLVTFSTL 299
Query: 291 GEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLN 350
GEKTT++SPEVFV AG+PCCRLVQN GEFVVTFP AYH GFSHGFN GEA+NIATPEWL
Sbjct: 300 GEKTTVMSPEVFVKAGIPCCRLVQNPGEFVVTFPGAYHSGFSHGFNFGEASNIATPEWLR 359
Query: 351 IAKDAAIRRASINYPPMVSHFQLLYDLAIAMHSSIPVAVSAKPRSSRLKDKNKDEGETLV 410
+AKDAAIRRA+INYPPMVSH QLLYD +A+ S +P +++ KPRSSRLKDK + EGE L
Sbjct: 360 MAKDAAIRRAAINYPPMVSHLQLLYDFVLALGSRVPTSINPKPRSSRLKDKARSEGERLT 419
Query: 411 KELFVQDVAQNNELLHVLGQGSPIVLLPQSSS 442
K+LFVQ++ NNELL LG+GSP+ LLPQSSS
Sbjct: 420 KKLFVQNIIHNNELLSSLGKGSPVALLPQSSS 451
>TAIR|locus:2146653 [details] [associations]
symbol:ELF6 "EARLY FLOWERING 6" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0048577 "negative regulation
of short-day photoperiodism, flowering" evidence=IMP] [GO:0048579
"negative regulation of long-day photoperiodism, flowering"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009741 "response to brassinosteroid stimulus" evidence=IMP]
[GO:0009826 "unidimensional cell growth" evidence=IMP] [GO:0033169
"histone H3-K9 demethylation" evidence=IMP] [GO:0009630
"gravitropism" evidence=RCA] [GO:0019344 "cysteine biosynthetic
process" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] InterPro:IPR003347
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
Pfam:PF02373 PROSITE:PS00028 PROSITE:PS50157 PROSITE:PS51184
SMART:SM00355 SMART:SM00558 GO:GO:0005634 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0003676 GO:GO:0009826 GO:GO:0016702 eggNOG:COG5048
Gene3D:3.30.160.60 GO:GO:0048577 GO:GO:0033169 GO:GO:0009741
EMBL:AL391716 GO:GO:0048579 InterPro:IPR003349 PROSITE:PS51183
EMBL:AY664500 EMBL:AK222064 IPI:IPI00540726 RefSeq:NP_196044.2
UniGene:At.10092 UniGene:At.72547 HSSP:P08151
ProteinModelPortal:Q6BDA0 SMR:Q6BDA0 DIP:DIP-46102N IntAct:Q6BDA0
PRIDE:Q6BDA0 EnsemblPlants:AT5G04240.1 GeneID:830303
KEGG:ath:AT5G04240 TAIR:At5g04240 HOGENOM:HOG000239739
InParanoid:Q6BDA0 OMA:CGEAANF PhylomeDB:Q6BDA0
ProtClustDB:CLSN2681632 ArrayExpress:Q6BDA0 Genevestigator:Q6BDA0
Pfam:PF02375 SMART:SM00545 Uniprot:Q6BDA0
Length = 1340
Score = 814 (291.6 bits), Expect = 2.4e-110, Sum P(2) = 2.4e-110
Identities = 152/266 (57%), Positives = 199/266 (74%)
Query: 189 GVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNY 248
G + + WN++ ++R+ GS+ RFM ++IPGVTSPMVYI MLFSWFAWH EDH+LHS+NY
Sbjct: 257 GWKLSNSSWNLQMIARSPGSVTRFMPDDIPGVTSPMVYIGMLFSWFAWHVEDHELHSMNY 316
Query: 249 LHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAGVP 308
LH G+ KTWY VP + A FEEV+R + YG I+ L LGEKTT++SPE+ V +G+P
Sbjct: 317 LHTGSPKTWYAVPCDYALDFEEVIRKNSYGRNIDQLAALTQLGEKTTLVSPEMIVASGIP 376
Query: 309 CCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAAIRRASINYPPMV 368
CCRLVQN GEFVVTFPR+YH+GFSHGFNCGEAAN TP+WLN+AK+AA+RRA++NY PM+
Sbjct: 377 CCRLVQNPGEFVVTFPRSYHVGFSHGFNCGEAANFGTPQWLNVAKEAAVRRAAMNYLPML 436
Query: 369 SHFQLLYDLAIAMHSSIPVAVSAKPRSSRLKDKNKDEGETLVKELFVQDVAQNNELLHVL 428
SH QLLY L ++ S +P ++ RSSRL+D+ ++E E LVK FV+D+ N+ L VL
Sbjct: 437 SHQQLLYLLTMSFVSRVPRSLLPGGRSSRLRDRQREEREFLVKRAFVEDILNENKNLSVL 496
Query: 429 GQ--GSPIV-----LLPQSSSGALGA 447
+ GS +V LLP+ S+ AL A
Sbjct: 497 LREPGSRLVMWDPDLLPRHSALALAA 522
Score = 312 (114.9 bits), Expect = 2.4e-110, Sum P(2) = 2.4e-110
Identities = 79/183 (43%), Positives = 99/183 (54%)
Query: 9 DILPWLKTLPVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKIXXXXXXXXKKTAITFL 68
+I WLK LP+AP F PT EF DPIAYI KIEKEAS +GICKI KK L
Sbjct: 5 EIPNWLKALPLAPVFRPTDTEFADPIAYISKIEKEASAFGICKIIPPLPKPSKKYVFYNL 64
Query: 69 NRSLAQ-----RXXXXXXXXXXXXXXXXXRQQQIGFCPRK----------PRPVQKPVWQ 113
N+SL + RQQ++G +K R K VWQ
Sbjct: 65 NKSLLKCPELVSDVDISKVCKEDRAVFTTRQQELGQTVKKNKGEKGKSNSQRSGVKQVWQ 124
Query: 114 SGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALEIESLYWKASVDKPFSVEYANDMPG 173
SG YT +FE K+K F K+ L G K L+ + IE+L+WKA+++KP +EYAND+PG
Sbjct: 125 SGGVYTLDQFEAKSKAFYKTQL---GTVKE-LAPVVIEALFWKAALEKPIYIEYANDVPG 180
Query: 174 SAF 176
SAF
Sbjct: 181 SAF 183
Score = 42 (19.8 bits), Expect = 2.1e-25, Sum P(2) = 2.1e-25
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 386 PVAVSAKPRSSRLKDKNKDEGETLVKEL 413
P +P LKD ++ +GET +E+
Sbjct: 600 PFMSVVQPSEKALKDLSERQGETDAQEI 627
>TAIR|locus:2044697 [details] [associations]
symbol:MEE27 "maternal effect embryo arrest 27"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=IMP] [GO:0009555 "pollen
development" evidence=IMP] InterPro:IPR003347 InterPro:IPR003888
InterPro:IPR003889 InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928
Pfam:PF05964 Pfam:PF05965 PROSITE:PS51184 PROSITE:PS51542
PROSITE:PS51543 SMART:SM00541 SMART:SM00542 SMART:SM00558
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009555
GO:GO:0003700 GO:GO:0009793 EMBL:AC004238 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
HOGENOM:HOG000241335 KO:K11446 IPI:IPI00542103 PIR:T00470
RefSeq:NP_181034.1 UniGene:At.53035 ProteinModelPortal:O64752
SMR:O64752 EnsemblPlants:AT2G34880.1 GeneID:818053
KEGG:ath:AT2G34880 TAIR:At2g34880 InParanoid:O64752 OMA:DICSCEG
PhylomeDB:O64752 ProtClustDB:CLSN2683666 ArrayExpress:O64752
Genevestigator:O64752 Uniprot:O64752
Length = 806
Score = 446 (162.1 bits), Expect = 1.9e-49, Sum P(2) = 1.9e-49
Identities = 116/336 (34%), Positives = 171/336 (50%)
Query: 112 WQSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALEIESLYWKASVDKPFS---VEYA 168
++SG +T ++FE A++F+ SY ++ N S EIE YW+ ++K + V Y
Sbjct: 177 FESGPEFTLEKFEKYAQDFKDSYFERKDNVGDP-SVEEIEGEYWRI-IEKETNEVKVLYG 234
Query: 169 NDM--P--GSAFVPVRKI---REAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVT 221
D+ P GS F KI R + + ++ G WN+ ++R +GSLL F EI GV
Sbjct: 235 TDLENPILGSGFSKGVKIPTRRNDMDKYISSG---WNLNNLARLQGSLLSFEDCEISGVQ 291
Query: 222 SPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVH--GYGE 279
P +Y+ M FS F WH ED+ L+SLNY H G K WYGVP A E+ +R H +
Sbjct: 292 VPWLYVGMCFSTFCWHVEDNHLYSLNYHHFGEPKVWYGVPGSHATGLEKAMRKHLPDLFD 351
Query: 280 EINPLVTFATLGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGE 339
E L L E T SP + GVP R VQNAGE+V+TFPRAYH GF+ GFNC E
Sbjct: 352 EQPDL-----LHELVTQFSPTILKNEGVPVYRAVQNAGEYVLTFPRAYHSGFNCGFNCAE 406
Query: 340 AANIATPEWLNIAKDAAIRRASINYPPMVSHFQLLYDLAIAMHSSIPVAVSAKPRSSRLK 399
A N+A +WL ++A + +SH ++L L A + ++ + + R
Sbjct: 407 AVNVAPVDWLAHGQNAVEIYSQETRKTSLSHDKIL--LGAAFEAVKSLSAHGEDNTKRFS 464
Query: 400 DKNKDEGETLVKELFVQDVAQNNELLHVLGQGSPIV 435
K + ++ + + + + LG G +V
Sbjct: 465 WKRFCGKDGIITKAIEARLRMEEKRIEALGNGFSLV 500
Score = 101 (40.6 bits), Expect = 1.9e-49, Sum P(2) = 1.9e-49
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 20 APEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
AP FHPT EF+D +AYI KI A +GIC+I
Sbjct: 61 APVFHPTSEEFEDTLAYIEKIRPLAESFGICRI 93
>DICTYBASE|DDB_G0268778 [details] [associations]
symbol:rbbB "putative Retinoblastoma (Rb) binding
protein" species:44689 "Dictyostelium discoideum" [GO:0005622
"intracellular" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] InterPro:IPR001606 InterPro:IPR003347
Pfam:PF01388 Pfam:PF02373 PROSITE:PS51011 PROSITE:PS51184
SMART:SM00558 dictyBase:DDB_G0268778 GO:GO:0005634
GenomeReviews:CM000150_GR GO:GO:0003677 GO:GO:0003700
EMBL:AAFI02000004 GO:GO:0006366 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 RefSeq:XP_646956.1 ProteinModelPortal:Q55ER4
EnsemblProtists:DDB0220639 GeneID:8616646 KEGG:ddi:DDB_G0268778
InParanoid:Q55ER4 OMA:ENEFWRI Uniprot:Q55ER4
Length = 1198
Score = 436 (158.5 bits), Expect = 7.3e-48, Sum P(2) = 7.3e-48
Identities = 107/304 (35%), Positives = 155/304 (50%)
Query: 115 GEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALEIESLYWKA--SVDKPFSVEYANDMP 172
G Y+ +EFE A NF K + GN +E+ +W+ + D+ V Y +D+
Sbjct: 649 GNTYSLEEFEILAANFSKKWFPD-GNNDPNT----VENEFWRIVENGDENVQVHYGSDLD 703
Query: 173 GSAFVPVRKIREAVGEGVTVGETP---WNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAM 229
+ G T P WN+ + + + SL + E I GVT PM+Y+ M
Sbjct: 704 VTT--------HGSGFSRTTNTQPNEHWNLNQMPKMEESLFSHLTETIAGVTDPMMYVGM 755
Query: 230 LFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVR--VHGYGEEINPLVTF 287
LFS F WH ED+ L+S+NYLH G KTWYGVP ++ FE+V++ V E+ P + +
Sbjct: 756 LFSSFCWHNEDNYLYSINYLHKGTYKTWYGVPGSCSDQFEKVMKNLVPELFEK-QPNLLY 814
Query: 288 ATLGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPE 347
+ TMISP+VF VP + +Q GE+V+TFP+AYH GFSHGF EA N A P+
Sbjct: 815 LLI----TMISPDVFKRRHVPIYKCLQGPGEYVITFPQAYHAGFSHGFTIAEAVNFAPPD 870
Query: 348 WLNIAKDAAIRRASINYPPMVSHFQLLYDLAIAMHSSIPVAVSAKPRSSRLKDKNKDEGE 407
W+ + R + + SH QLLY +A SS ++V ++K K
Sbjct: 871 WIPFGSSSIERYQETHRSSVFSHDQLLYTIANRSPSS-DLSVWLSKEFQKIKSKENSLRN 929
Query: 408 TLVK 411
L+K
Sbjct: 930 QLLK 933
Score = 105 (42.0 bits), Expect = 7.3e-48, Sum P(2) = 7.3e-48
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 17 LPVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
+P AP F+PT+ EF+ P+ YI I A +YGICKI
Sbjct: 268 IPEAPVFYPTIEEFKSPLRYIESIRPIAEKYGICKI 303
>TAIR|locus:2128659 [details] [associations]
symbol:JMJ14 "JUMONJI 14" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IDA] [GO:0048573 "photoperiodism, flowering" evidence=IMP]
[GO:0009910 "negative regulation of flower development"
evidence=IMP] [GO:0034720 "histone H3-K4 demethylation"
evidence=IMP] [GO:0010216 "maintenance of DNA methylation"
evidence=IMP] [GO:0043687 "post-translational protein modification"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR003347 InterPro:IPR003888
InterPro:IPR003889 InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928
Pfam:PF05964 Pfam:PF05965 PROSITE:PS51184 PROSITE:PS51542
PROSITE:PS51543 SMART:SM00541 SMART:SM00542 SMART:SM00558
GO:GO:0005654 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003700
GO:GO:0006351 GO:GO:0016702 GO:GO:0009910 GO:GO:0048573
EMBL:AL161553 EMBL:AL080253 GO:GO:0010216 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GO:GO:0032453 EMBL:BT002486 EMBL:BT010548 IPI:IPI00516310
IPI:IPI00656704 PIR:T10582 RefSeq:NP_001031681.1 RefSeq:NP_193773.2
UniGene:At.43482 ProteinModelPortal:Q8GUI6 SMR:Q8GUI6 IntAct:Q8GUI6
PaxDb:Q8GUI6 PRIDE:Q8GUI6 EnsemblPlants:AT4G20400.1 GeneID:827788
KEGG:ath:AT4G20400 TAIR:At4g20400 HOGENOM:HOG000241335
InParanoid:Q8GUI6 KO:K11446 OMA:VQRSGEF PhylomeDB:Q8GUI6
ProtClustDB:CLSN2679960 Genevestigator:Q8GUI6 Uniprot:Q8GUI6
Length = 954
Score = 437 (158.9 bits), Expect = 8.7e-48, Sum P(2) = 8.7e-48
Identities = 116/339 (34%), Positives = 169/339 (49%)
Query: 112 WQSGEYYTFQEFETKAKNFEKSYL--------KKCGNKKAALSALEIESLYWKASVDKPF 163
+Q+G +T +EF+ + F++ Y K NKK ++E YW+
Sbjct: 171 FQTGPDFTLEEFQKYDEYFKECYFQSEDHPGSKASENKKFKPKVKDLEGEYWRIVEQATD 230
Query: 164 SVE--YANDMP----GSAFVPVRKIREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEI 217
VE Y D+ GS F P K + E + WN+ +SR GS+L F +I
Sbjct: 231 EVEVYYGADLETKKFGSGF-PKYKPGYPISEADQYSQCGWNLNNLSRLPGSVLAFESCDI 289
Query: 218 PGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVV--RVH 275
GV P +Y+ M FS F WH EDH L+S+NYLH G K WYG+P A +FE V+ R+
Sbjct: 290 SGVIVPWLYVGMCFSTFCWHVEDHHLYSMNYLHTGDPKVWYGIPGNHAESFENVMKKRLP 349
Query: 276 GYGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGF 335
EE L L + T +SP + GVP R VQ +GEF++TFP+AYH GF+ GF
Sbjct: 350 DLFEEQPDL-----LHQLVTQLSPRILKEEGVPVYRAVQRSGEFILTFPKAYHSGFNCGF 404
Query: 336 NCGEAANIATPEWLNIAKDAAIRRASINYPPMVSHFQLLYDLAI-AMHSSIPVAVSAK-- 392
NC EA N+A +WL ++A + +SH +LL A+ A + +++S K
Sbjct: 405 NCAEAVNVAPVDWLVHGQNAVEGYSKQRRKSSLSHDKLLLGAAMEATYCLWELSLSKKKT 464
Query: 393 PRSSRLKDKNKDEGETLVKELFVQDVAQNNELLHVLGQG 431
P +R K ++G L+ + + V E L+ L G
Sbjct: 465 PVIARWKRVCSEDG--LLTKAVKKRVQMEEERLNHLQDG 501
Score = 99 (39.9 bits), Expect = 8.7e-48, Sum P(2) = 8.7e-48
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 20 APEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
AP F+PT +F DP+ YI K+ +A YGIC+I
Sbjct: 56 APIFYPTNEDFDDPLGYIEKLRSKAESYGICRI 88
>TAIR|locus:2196979 [details] [associations]
symbol:JMJ18 "Jumonji domain-containing protein 18"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IDA] [GO:0048573 "photoperiodism, flowering" evidence=IMP]
InterPro:IPR003347 InterPro:IPR003888 InterPro:IPR003889
InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928 Pfam:PF05964
Pfam:PF05965 PROSITE:PS51184 PROSITE:PS51542 PROSITE:PS51543
SMART:SM00541 SMART:SM00542 SMART:SM00558 EMBL:CP002684
GO:GO:0005634 GO:GO:0003700 GO:GO:0048573 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 GO:GO:0032453 KO:K11446
IPI:IPI00545873 RefSeq:NP_001185118.1 RefSeq:NP_174367.6
UniGene:At.27326 UniGene:At.74914 ProteinModelPortal:F4I6G4
SMR:F4I6G4 PRIDE:F4I6G4 EnsemblPlants:AT1G30810.1
EnsemblPlants:AT1G30810.2 GeneID:839963 KEGG:ath:AT1G30810
OMA:NCERECF Uniprot:F4I6G4
Length = 819
Score = 427 (155.4 bits), Expect = 3.4e-47, Sum P(2) = 3.4e-47
Identities = 111/289 (38%), Positives = 147/289 (50%)
Query: 104 PRPVQKPVWQSGEYYTFQEFETKAKNFEKSYLKK--CGNK--KAALSALEIESLYWKASV 159
P +K + SG +T EFE A +F+ SY +K G K S +IE YW+ V
Sbjct: 165 PEAEEKFGFNSGSDFTLDEFEKYALHFKDSYFEKKDSGGDIVKWTPSVDDIEGEYWRI-V 223
Query: 160 DKP---FSVEYANDMP----GSAFVP-VRKIREAVGEGVTVGETPWNMRGVSRAKGSLLR 211
++P V Y D+ GS F K + E T+ + WN+ + R GS+L
Sbjct: 224 EQPTDEVEVYYGADLENGVLGSGFYKRAEKFTGSDMEQYTL--SGWNLNNLPRLPGSVLS 281
Query: 212 FMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEV 271
F +I GV P +Y+ M FS F WH EDH L+SLNY H G K WYGVP A A E+
Sbjct: 282 FEDCDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYHHFGEPKVWYGVPGSNATALEKA 341
Query: 272 VRVH--GYGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHM 329
+R H EE L L T SP + GV R+VQN+GE+V+TFPRAYH
Sbjct: 342 MRKHLPDLFEEQPDL-----LHGLVTQFSPSILKDEGVQAYRVVQNSGEYVLTFPRAYHA 396
Query: 330 GFSHGFNCGEAANIATPEWLNIAKDAAIRRASINYPPMVSHFQLLYDLA 378
GF+ GFNC EA N+A +WL ++A + +SH +LL A
Sbjct: 397 GFNCGFNCAEAVNVAPVDWLAHGQNAVELYSKETRKTSLSHDKLLLGAA 445
Score = 100 (40.3 bits), Expect = 3.4e-47, Sum P(2) = 3.4e-47
Identities = 20/33 (60%), Positives = 23/33 (69%)
Query: 20 APEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
AP F P+L EF DP+AYI KI A YGIC+I
Sbjct: 59 APVFTPSLEEFVDPLAYIEKIRPLAEPYGICRI 91
>POMBASE|SPAC1002.05c [details] [associations]
symbol:jmj2 "histone demethylase Jmj2" species:4896
"Schizosaccharomyces pombe" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000790 "nuclear chromatin" evidence=ISM] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IMP] [GO:0008270 "zinc
ion binding" evidence=ISM] [GO:0016577 "histone demethylation"
evidence=IDA] [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IDA] [GO:0034647 "histone demethylase activity
(H3-trimethyl-K4 specific)" evidence=IMP;IDA] [GO:0034648 "histone
demethylase activity (H3-dimethyl-K4 specific)" evidence=IDA]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=ISO] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00501 SMART:SM00558 PomBase:SPAC1002.05c
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0008270
GO:GO:0006338 GO:GO:0000122 GO:GO:0000790 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 GO:GO:0051864
eggNOG:NOG327026 GO:GO:0034647 OMA:RNISGMT OrthoDB:EOG44N21B
RefSeq:NP_593492.1 ProteinModelPortal:Q9US53
EnsemblFungi:SPAC1002.05c.1 GeneID:2543275 KEGG:spo:SPAC1002.05c
NextBio:20804296 Uniprot:Q9US53
Length = 715
Score = 423 (154.0 bits), Expect = 5.1e-47, Sum P(2) = 5.1e-47
Identities = 101/288 (35%), Positives = 149/288 (51%)
Query: 112 WQSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALEIESLYWKASVDKPFS--VEYAN 169
+++G YYT FE NF+K+Y K K + ++ +E YWK D S VEY
Sbjct: 344 FETGNYYTLSNFEKYCDNFKKNYFSKF--KDSEITEDIVEKEYWKLVKDNNTSLEVEYGA 401
Query: 170 DMP----GSAFVPVRKIREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPMV 225
D+ GSAF + K V + WN+ ++ GSLL ++ + G+T P +
Sbjct: 402 DLSTLDQGSAFPSLAK--NPVNP---YSKDTWNLNVIASTNGSLLSYIDNPVSGITCPWL 456
Query: 226 YIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINP-L 284
Y+ M FS F WH ED+ +S+NY H G +K WYG+P + A FE +I P L
Sbjct: 457 YVGMCFSTFCWHVEDNYTYSVNYQHYGDTKLWYGIPGDQAERFERAAL------DIAPDL 510
Query: 285 VTFAT--LGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAAN 342
V L + TMI+P+ GV + Q EFV+TFP+++H G +HGFN EA N
Sbjct: 511 VKKQKDLLYQLATMINPDELQKRGVDVYFIDQGPNEFVITFPKSFHAGINHGFNINEAVN 570
Query: 343 IATPEWL--NIAKDAAIRRASINYPPMVSHFQLLYDLAIAMHSSIPVA 388
A +WL + + ++ S+ PP++SH L+Y+LA S I V+
Sbjct: 571 FAPKDWLLNGFSLNGVLKYQSLLKPPVLSHDMLVYNLATNPASEISVS 618
Score = 98 (39.6 bits), Expect = 5.1e-47, Sum P(2) = 5.1e-47
Identities = 21/36 (58%), Positives = 23/36 (63%)
Query: 17 LPVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
LPVAP F+P EFQD I YI KI +YGI KI
Sbjct: 57 LPVAPVFYPDKEEFQDSIGYINKIAPIGEKYGIIKI 92
>UNIPROTKB|G4N2P7 [details] [associations]
symbol:MGG_04878 "Lid2 complex component lid2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001841
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00184
SMART:SM00249 SMART:SM00501 SMART:SM00558 GO:GO:0005634
EMBL:CM001233 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
KO:K11446 RefSeq:XP_003712359.1 EnsemblFungi:MGG_04878T0
GeneID:2675627 KEGG:mgr:MGG_04878 Uniprot:G4N2P7
Length = 1755
Score = 424 (154.3 bits), Expect = 1.5e-46, Sum P(2) = 1.5e-46
Identities = 110/330 (33%), Positives = 167/330 (50%)
Query: 112 WQSGEYYTFQEFETKAKNFEKSYLKKCG------NKKAALSALEIESLYWK--ASVDKPF 163
++ G Y+ ++F+ +A +F++SY +K N ++ ++E +W+ +S+++
Sbjct: 516 FEEGGLYSLKQFQERAADFKQSYFEKKMPVDPQLNCHRPVTEDDVEREFWRLVSSIEETV 575
Query: 164 SVEYANDMP----GSAFVPVRKIREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPG 219
VEY D+ GS F K + PWN+ + SL R++K +I G
Sbjct: 576 EVEYGADIHCTTHGSGFPTAEKNPDD-----PYSTDPWNLNILPLHPESLFRYIKSDISG 630
Query: 220 VTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGE 279
+T P VY+ M+FS F WH EDH +S NY H GA+KTWYG+P E A FE +R E
Sbjct: 631 MTVPWVYVGMIFSTFCWHNEDHYSYSANYQHFGATKTWYGIPGEDAEKFEAAMR-----E 685
Query: 280 EINPLVTFAT----LGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGF 335
I L FAT L + T++ PE AGV + Q AG+FV+TFP+AYH GF+HGF
Sbjct: 686 AIPEL--FATQPDLLFQLVTLLPPEQLKKAGVRVYAIDQRAGQFVITFPQAYHAGFNHGF 743
Query: 336 NCGEAANIATPEWLNIAKDAAIRRASINYPPMVSHFQLLYDLAIAMHS---SIPVAVSAK 392
N EA N A +W R P SH +LL+ A + S +I A
Sbjct: 744 NFNEAVNFAPSDWEPFGLAGVERLQQFRRQPCFSHDELLWTAAEGIASGGLTIQTAKWLA 803
Query: 393 PRSSRLKDKNKDEGETLVKELFVQDVAQNN 422
P R+ + + + V + +D+AQ++
Sbjct: 804 PALERIHSRELAQRQAFVTKH--KDLAQHS 831
Score = 110 (43.8 bits), Expect = 1.5e-46, Sum P(2) = 1.5e-46
Identities = 22/50 (44%), Positives = 36/50 (72%)
Query: 3 EPVQQQDILPWLKTLPVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
EP+++++ L ++ AP ++PT EF++P+AY+ KI EA +YGICKI
Sbjct: 81 EPLKRRERLNGVEE---APTYYPTAEEFKEPMAYMRKIAPEARKYGICKI 127
>ASPGD|ASPL0000010243 [details] [associations]
symbol:AN8211 species:162425 "Emericella nidulans"
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0031934 "mating-type
region heterochromatin" evidence=IEA] [GO:0048189 "Lid2 complex"
evidence=IEA] [GO:0031618 "nuclear centromeric heterochromatin"
evidence=IEA] [GO:0034647 "histone demethylase activity
(H3-trimethyl-K4 specific)" evidence=IEA] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IEA] [GO:0030466 "chromatin
silencing at silent mating-type cassette" evidence=IEA] [GO:0034630
"RITS complex localization" evidence=IEA] [GO:0031507
"heterochromatin assembly" evidence=IEA] [GO:0051572 "negative
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0051567
"histone H3-K9 methylation" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 EMBL:BN001302 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 OrthoDB:EOG44N21B KO:K11446
EMBL:AACD01000143 RefSeq:XP_681480.1 ProteinModelPortal:Q5AU19
EnsemblFungi:CADANIAT00004258 GeneID:2869040 KEGG:ani:AN8211.2
HOGENOM:HOG000160061 OMA:HFGATKT Uniprot:Q5AU19
Length = 1717
Score = 425 (154.7 bits), Expect = 4.6e-46, Sum P(2) = 4.6e-46
Identities = 111/314 (35%), Positives = 155/314 (49%)
Query: 112 WQSGEYYTFQEFETKAKNFEKSYL-KKCG-----NKKAALSALEIESLYWKA--SVDKPF 163
++ G Y+ ++F+ KA NF+K+Y K N + S ++E +W+ S+ +
Sbjct: 510 FEEGGVYSLKQFQEKANNFKKNYFASKMPFDPVLNTRRRESEDDVEREFWRLVESLTETV 569
Query: 164 SVEYANDMP----GSAFVPVRKIREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPG 219
VEY D+ GS F V R + + PWN+ + SL R +K +I G
Sbjct: 570 EVEYGADIHSTTHGSGFPTVE--RNPLDP---YSKDPWNLNNLPFHGESLFRHIKSDISG 624
Query: 220 VTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGE 279
+T P VY+ M FS F WH EDH +S NY H GA+KTWYG+P A AFEE +R E
Sbjct: 625 MTVPWVYVGMCFSTFCWHNEDHYAYSANYQHFGATKTWYGIPGADAEAFEEAMR-QAVPE 683
Query: 280 --EINPLVTFATLGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNC 337
E P + F + T++ P+ AGV L Q AG+FV+TFP+AYH GF+HGFN
Sbjct: 684 LFEGQPDLLF----QLVTLMPPDQLRKAGVNVYALDQRAGQFVITFPQAYHAGFNHGFNF 739
Query: 338 GEAANIATPEWLNIAKDAAIRRASINYPPMVSHFQLLYDLAIAMHSSIPVAVSAKPRSSR 397
EA N A +W R + P SH +LL+ A A +SI A P R
Sbjct: 740 NEAVNFAPVDWEPFGAAGVERLQAFRRHPCFSHDELLFTAA-ARDTSISTAKWLAPALQR 798
Query: 398 LKDKNKDEGETLVK 411
+ E + K
Sbjct: 799 TCSRELAERASFAK 812
Score = 104 (41.7 bits), Expect = 4.6e-46, Sum P(2) = 4.6e-46
Identities = 21/36 (58%), Positives = 24/36 (66%)
Query: 17 LPVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
L AP F PT EF+DP AYI KI E +YGIC+I
Sbjct: 72 LQEAPTFRPTEEEFRDPEAYIRKIAPEGKKYGICRI 107
>TAIR|locus:2025635 [details] [associations]
symbol:PKDM7D species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA;TAS]
[GO:0006486 "protein glycosylation" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0010413 "glucuronoxylan metabolic process" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045492
"xylan biosynthetic process" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA]
InterPro:IPR003347 InterPro:IPR003888 InterPro:IPR003889
InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928 Pfam:PF05964
Pfam:PF05965 PROSITE:PS51184 PROSITE:PS51542 PROSITE:PS51543
SMART:SM00541 SMART:SM00542 SMART:SM00558 EMBL:CP002684
GO:GO:0005634 GO:GO:0003700 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026 KO:K11446 EMBL:AB493442
IPI:IPI00545403 RefSeq:NP_001184940.1 RefSeq:NP_172338.4
UniGene:At.26858 ProteinModelPortal:C0SUT9 PaxDb:C0SUT9
PRIDE:C0SUT9 EnsemblPlants:AT1G08620.1 EnsemblPlants:AT1G08620.2
GeneID:837384 KEGG:ath:AT1G08620 TAIR:At1g08620 OMA:GMNELET
PhylomeDB:C0SUT9 ProtClustDB:CLSN2722602 Genevestigator:C0SUT9
Uniprot:C0SUT9
Length = 1209
Score = 413 (150.4 bits), Expect = 1.2e-44, Sum P(2) = 1.2e-44
Identities = 111/277 (40%), Positives = 140/277 (50%)
Query: 120 FQEF--ETKAKNFEKSYLK---KC--GNKKAALS-ALE-IESLYWKASVDKP---FSVEY 167
FQ++ E KA+ F+KS KC N ALE +E YW+ VDK V Y
Sbjct: 275 FQKYADEFKAQYFKKSETSTDDKCKVDNSIDCWEPALEDVEGEYWRI-VDKATEEIEVLY 333
Query: 168 ANDMP----GSAFVPVRKIREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSP 223
D+ GS F + A ++ WN+ R GSLL++ +I GV P
Sbjct: 334 GADLETGVFGSGFPKISSSHNASSSEDKYAKSGWNLNNFPRLPGSLLKYEGSDISGVLVP 393
Query: 224 MVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVH--GYGEEI 281
+YI M FS F WH EDH L+SLNY+H GA K WYGV + A EE +R H EE
Sbjct: 394 WLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKLWYGVGGKDAVKLEEAMRKHLPDLFEEQ 453
Query: 282 NPLVTFATLGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAA 341
L L + T +SP AGVP R VQ+AGEFV+TFPRAYH GF+ GFNC EA
Sbjct: 454 PDL-----LHKLVTQLSPSKLKTAGVPVHRCVQHAGEFVLTFPRAYHAGFNSGFNCAEAV 508
Query: 342 NIATPEWLNIAKDAAIRRASINYPPMVSHFQLLYDLA 378
N+A +WL + A +SH +LL A
Sbjct: 509 NVAPVDWLPHGQIAIELYCQQGRKTSISHDKLLLGAA 545
Score = 98 (39.6 bits), Expect = 1.2e-44, Sum P(2) = 1.2e-44
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 20 APEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
AP F+P+ EF+D + YI KI EA +YGIC+I
Sbjct: 146 APVFYPSEEEFEDTLNYIAKIRPEAEKYGICRI 178
>UNIPROTKB|F1MQ59 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019907 "cyclin-dependent protein kinase activating kinase
holoenzyme complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005737 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003682
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ECSKPRE EMBL:DAAA02014587
IPI:IPI00715082 Ensembl:ENSBTAT00000027280 Uniprot:F1MQ59
Length = 1693
Score = 411 (149.7 bits), Expect = 2.4e-44, Sum P(3) = 2.4e-44
Identities = 100/277 (36%), Positives = 145/277 (52%)
Query: 113 QSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALE-IESLYWK--ASVDKPFSVEYAN 169
Q+ YT Q F A NF+ Y N + E +E +W+ +S+++ VEY
Sbjct: 356 QAVREYTLQSFGEMADNFKSDYF----NMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGA 411
Query: 170 DMP----GSAFVPVRK-IREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPM 224
D+ GS F PV+ R+ + E + WN+ + + S+L + +I G+ P
Sbjct: 412 DISSKDFGSGF-PVKDGRRKMLPEEEEYALSGWNLNNMPVLEQSVLAHINVDISGMKVPW 470
Query: 225 VYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPL 284
+Y+ M FS F WH EDH +S+NYLH G KTWYGVP AA EEV+R E+ P
Sbjct: 471 LYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMR------ELAPE 524
Query: 285 VTFAT---LGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAA 341
+ + L + T+++P V + GVP R Q AGEFVVTFPRAYH GF+ G+N EA
Sbjct: 525 LFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAV 584
Query: 342 NIATPEWLNIAKDAAIRRASINYPPMVSHFQLLYDLA 378
N T +WL I + + + SH +L++ +A
Sbjct: 585 NFCTADWLPIGRQCVSHYRRLRRHCVFSHEELIFKMA 621
Score = 85 (35.0 bits), Expect = 2.4e-44, Sum P(3) = 2.4e-44
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 18 PVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P F P+ EF DP+++I +I A + GICKI
Sbjct: 17 PECPVFEPSWEEFTDPLSFIGRIRPMAEKTGICKI 51
Score = 42 (19.8 bits), Expect = 2.4e-44, Sum P(3) = 2.4e-44
Identities = 13/64 (20%), Positives = 30/64 (46%)
Query: 355 AAIRRASINYPPMVSHFQLLYDLAIAMHSSIPVAVSAKPRSSRLKDKNKDEGETLVKELF 414
A +++A+ N P + H A + + +VS+ PR + D + + + ++E +
Sbjct: 1299 AELQKAAAN-PDLQGHLPSFQPSAF---NRVASSVSSSPRQTADYDDEETDSDEDIRETY 1354
Query: 415 VQDV 418
D+
Sbjct: 1355 GYDM 1358
>UNIPROTKB|F5H1F7 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:AC005844
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC007406 HGNC:HGNC:9886 ChiTaRS:KDM5A IPI:IPI01018722
ProteinModelPortal:F5H1F7 SMR:F5H1F7 Ensembl:ENST00000382815
ArrayExpress:F5H1F7 Bgee:F5H1F7 Uniprot:F5H1F7
Length = 1636
Score = 410 (149.4 bits), Expect = 3.3e-44, Sum P(3) = 3.3e-44
Identities = 100/277 (36%), Positives = 144/277 (51%)
Query: 113 QSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALE-IESLYWK--ASVDKPFSVEYAN 169
Q+ YT Q F A NF+ Y N + E +E +W+ +S+++ VEY
Sbjct: 356 QAVREYTLQSFGEMADNFKSDYF----NMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGA 411
Query: 170 DMP----GSAFVPVRKIREAV-GEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPM 224
D+ GS F PV+ R + E + WN+ + + S+L + +I G+ P
Sbjct: 412 DISSKDFGSGF-PVKDGRRKILPEEEEYALSGWNLNNMPVLEQSVLAHINVDISGMKVPW 470
Query: 225 VYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPL 284
+Y+ M FS F WH EDH +S+NYLH G KTWYGVP AA EEV+R E+ P
Sbjct: 471 LYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMR------ELAPE 524
Query: 285 VTFAT---LGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAA 341
+ + L + T+++P V + GVP R Q AGEFVVTFPRAYH GF+ G+N EA
Sbjct: 525 LFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAV 584
Query: 342 NIATPEWLNIAKDAAIRRASINYPPMVSHFQLLYDLA 378
N T +WL I + + + SH +L++ +A
Sbjct: 585 NFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMA 621
Score = 84 (34.6 bits), Expect = 3.3e-44, Sum P(3) = 3.3e-44
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 18 PVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P F P+ EF DP+++I +I A + GICKI
Sbjct: 17 PECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKI 51
Score = 42 (19.8 bits), Expect = 3.3e-44, Sum P(3) = 3.3e-44
Identities = 13/64 (20%), Positives = 30/64 (46%)
Query: 355 AAIRRASINYPPMVSHFQLLYDLAIAMHSSIPVAVSAKPRSSRLKDKNKDEGETLVKELF 414
A +++A+ N P + H A + + +VS+ PR + D + + + ++E +
Sbjct: 1298 AELQKAAAN-PDLQGHLPSFQQSAF---NRVVSSVSSSPRQTMDYDDEETDSDEDIRETY 1353
Query: 415 VQDV 418
D+
Sbjct: 1354 GYDM 1357
>UNIPROTKB|P29375 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0019907 "cyclin-dependent
protein kinase activating kinase holoenzyme complex" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0007275 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003700 GO:GO:0003682 GO:GO:0016568 GO:GO:0006366
GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:AC005844
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC007406 eggNOG:NOG327026 KO:K11446 EMBL:S66431 EMBL:AB209999
EMBL:BC048307 EMBL:BC053893 EMBL:BC110916 IPI:IPI00021363
IPI:IPI01014284 PIR:I78879 RefSeq:NP_001036068.1 UniGene:Hs.76272
PDB:2JXJ PDB:2KGG PDB:2KGI PDB:3GL6 PDBsum:2JXJ PDBsum:2KGG
PDBsum:2KGI PDBsum:3GL6 ProteinModelPortal:P29375 SMR:P29375
DIP:DIP-472N IntAct:P29375 STRING:P29375 PhosphoSite:P29375
DMDM:215274124 PaxDb:P29375 PRIDE:P29375 Ensembl:ENST00000399788
GeneID:5927 KEGG:hsa:5927 UCSC:uc001qif.1 CTD:5927
GeneCards:GC12M000389 H-InvDB:HIX0010308 HGNC:HGNC:9886
HPA:HPA006201 MIM:180202 neXtProt:NX_P29375 PharmGKB:PA34250
HOGENOM:HOG000290719 OMA:ECSKPRE OrthoDB:EOG4GB758 ChiTaRS:KDM5A
EvolutionaryTrace:P29375 GenomeRNAi:5927 NextBio:23088
ArrayExpress:P29375 Bgee:P29375 CleanEx:HS_JARID1A CleanEx:HS_RBP2
Genevestigator:P29375 GermOnline:ENSG00000073614 Uniprot:P29375
Length = 1690
Score = 410 (149.4 bits), Expect = 3.8e-44, Sum P(3) = 3.8e-44
Identities = 100/277 (36%), Positives = 144/277 (51%)
Query: 113 QSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALE-IESLYWK--ASVDKPFSVEYAN 169
Q+ YT Q F A NF+ Y N + E +E +W+ +S+++ VEY
Sbjct: 356 QAVREYTLQSFGEMADNFKSDYF----NMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGA 411
Query: 170 DMP----GSAFVPVRKIREAV-GEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPM 224
D+ GS F PV+ R + E + WN+ + + S+L + +I G+ P
Sbjct: 412 DISSKDFGSGF-PVKDGRRKILPEEEEYALSGWNLNNMPVLEQSVLAHINVDISGMKVPW 470
Query: 225 VYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPL 284
+Y+ M FS F WH EDH +S+NYLH G KTWYGVP AA EEV+R E+ P
Sbjct: 471 LYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMR------ELAPE 524
Query: 285 VTFAT---LGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAA 341
+ + L + T+++P V + GVP R Q AGEFVVTFPRAYH GF+ G+N EA
Sbjct: 525 LFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAV 584
Query: 342 NIATPEWLNIAKDAAIRRASINYPPMVSHFQLLYDLA 378
N T +WL I + + + SH +L++ +A
Sbjct: 585 NFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMA 621
Score = 84 (34.6 bits), Expect = 3.8e-44, Sum P(3) = 3.8e-44
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 18 PVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P F P+ EF DP+++I +I A + GICKI
Sbjct: 17 PECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKI 51
Score = 42 (19.8 bits), Expect = 3.8e-44, Sum P(3) = 3.8e-44
Identities = 13/64 (20%), Positives = 30/64 (46%)
Query: 355 AAIRRASINYPPMVSHFQLLYDLAIAMHSSIPVAVSAKPRSSRLKDKNKDEGETLVKELF 414
A +++A+ N P + H A + + +VS+ PR + D + + + ++E +
Sbjct: 1298 AELQKAAAN-PDLQGHLPSFQQSAF---NRVVSSVSSSPRQTMDYDDEETDSDEDIRETY 1353
Query: 415 VQDV 418
D+
Sbjct: 1354 GYDM 1357
>UNIPROTKB|F1Q4J4 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 KO:K11446 CTD:5927 OMA:ECSKPRE
EMBL:AAEX03015319 EMBL:AAEX03015320 RefSeq:XP_854690.3
Ensembl:ENSCAFT00000025008 GeneID:477727 KEGG:cfa:477727
Uniprot:F1Q4J4
Length = 1688
Score = 409 (149.0 bits), Expect = 4.8e-44, Sum P(3) = 4.8e-44
Identities = 99/277 (35%), Positives = 145/277 (52%)
Query: 113 QSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALE-IESLYWK--ASVDKPFSVEYAN 169
Q+ YT Q F A NF+ Y N + E +E +W+ +S+++ VEY
Sbjct: 356 QAVREYTLQSFGEMADNFKSDYF----NMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGA 411
Query: 170 DMP----GSAFVPVRK-IREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPM 224
D+ GS F PV+ R+ + E + WN+ + + S+L + +I G+ P
Sbjct: 412 DISSKDFGSGF-PVKDGRRKMLPEEEEYALSGWNLNNMPVLEQSVLAHINVDISGMKVPW 470
Query: 225 VYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPL 284
+Y+ M FS F WH EDH +S+NYLH G KTWYGVP AA EEV+R E+ P
Sbjct: 471 LYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMR------ELAPE 524
Query: 285 VTFAT---LGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAA 341
+ + L + T+++P + + GVP R Q AGEFVVTFPRAYH GF+ G+N EA
Sbjct: 525 LFESQPDLLHQLVTIMNPNILMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAV 584
Query: 342 NIATPEWLNIAKDAAIRRASINYPPMVSHFQLLYDLA 378
N T +WL I + + + SH +L++ +A
Sbjct: 585 NFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMA 621
Score = 84 (34.6 bits), Expect = 4.8e-44, Sum P(3) = 4.8e-44
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 18 PVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P F P+ EF DP+++I +I A + GICKI
Sbjct: 17 PECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKI 51
Score = 42 (19.8 bits), Expect = 4.8e-44, Sum P(3) = 4.8e-44
Identities = 13/64 (20%), Positives = 30/64 (46%)
Query: 355 AAIRRASINYPPMVSHFQLLYDLAIAMHSSIPVAVSAKPRSSRLKDKNKDEGETLVKELF 414
A +++A+ N P + H A + + +VS+ PR + D + + + ++E +
Sbjct: 1296 AELQKAAAN-PDLQGHLPSFQQSAF---NRVVSSVSSSPRQTMDYDDEETDSDEDIRETY 1351
Query: 415 VQDV 418
D+
Sbjct: 1352 GYDM 1355
Score = 41 (19.5 bits), Expect = 6.2e-44, Sum P(3) = 6.2e-44
Identities = 10/44 (22%), Positives = 21/44 (47%)
Query: 358 RRASINYPPMVSHFQLLYDLAIAMHSSIPVAVSAKPRSSRLKDK 401
+ A ++ P S Q+L D+A+ + A+ + +R D+
Sbjct: 861 QEAMMDETPDSSKLQMLIDMALVVDXXXXSPTKARSQQARWLDE 904
>UNIPROTKB|F1NN75 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0019907 "cyclin-dependent
protein kinase activating kinase holoenzyme complex" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005737 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003682
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ECSKPRE EMBL:AADN02006480
IPI:IPI00571489 Ensembl:ENSGALT00000021199 Uniprot:F1NN75
Length = 1696
Score = 406 (148.0 bits), Expect = 5.0e-44, Sum P(3) = 5.0e-44
Identities = 98/277 (35%), Positives = 145/277 (52%)
Query: 113 QSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALE-IESLYWK--ASVDKPFSVEYAN 169
Q+ YT Q F A NF+ Y N + E +E +W+ +S+++ VEY
Sbjct: 359 QAVREYTLQSFGEMADNFKSDYF----NMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGA 414
Query: 170 DMP----GSAFVPVRK-IREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPM 224
D+ GS F PV+ R+ + E + WN+ + + S+L + +I G+ P
Sbjct: 415 DISSKDFGSGF-PVKDGRRKLMPEEEDYALSGWNLNNMPILEQSVLAHINADISGMKVPW 473
Query: 225 VYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPL 284
+Y+ M FS F WH EDH +S+NYLH G KTWYGVP AA E+V++ E+ P
Sbjct: 474 LYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEDVMK------ELAPE 527
Query: 285 VTFAT---LGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAA 341
+ + L + T+++P V + GVP R Q AGEFVVTFPRAYH GF+ G+N EA
Sbjct: 528 LFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAV 587
Query: 342 NIATPEWLNIAKDAAIRRASINYPPMVSHFQLLYDLA 378
N T +WL I + + + SH +L++ +A
Sbjct: 588 NFCTADWLPIGRQCVSHYRRLGRHCVFSHEELIFKMA 624
Score = 83 (34.3 bits), Expect = 5.0e-44, Sum P(3) = 5.0e-44
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 18 PVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P F P+ EF DP+ +I +I A + GICKI
Sbjct: 21 PECPVFEPSWEEFSDPLGFIGRIRGLAEKTGICKI 55
Score = 46 (21.3 bits), Expect = 5.0e-44, Sum P(3) = 5.0e-44
Identities = 14/67 (20%), Positives = 31/67 (46%)
Query: 355 AAIRRASINYPPMVSHFQLLYDLAIAMHSSIPVAVSAKPRSSRLKDKNKDEGETLVKELF 414
A +++A+ N P + H A + + +VS+ PR + D + + + ++E +
Sbjct: 1302 AELQKAAAN-PDLQGHLTSFQQSAF---NRVIGSVSSSPRQTLDYDDEETDSDEDIRETY 1357
Query: 415 VQDVAQN 421
D+ N
Sbjct: 1358 GYDIKDN 1364
>UNIPROTKB|B4E1Y0 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC010889 UniGene:Hs.80358 HGNC:HGNC:11115 ChiTaRS:KDM5D
HOVERGEN:HBG068574 EMBL:AK304027 IPI:IPI01013623 SMR:B4E1Y0
STRING:B4E1Y0 Ensembl:ENST00000535647 UCSC:uc004fuh.2
Uniprot:B4E1Y0
Length = 888
Score = 393 (143.4 bits), Expect = 1.7e-43, Sum P(2) = 1.7e-43
Identities = 105/328 (32%), Positives = 161/328 (49%)
Query: 113 QSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALE-IESLYWK--ASVDKPFSVEYAN 169
Q+ + Y+ Q F A +F+ Y N + E +E +W+ +S+++ +VEY
Sbjct: 377 QATQEYSLQSFGEMADSFKSDYF----NMPVHMVPTELVEKEFWRLVSSIEEDVTVEYGA 432
Query: 170 DMP----GSAFVPVRKIREAVG-EGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPM 224
D+ GS F PV ++ + E + WN+ + S+L + +I G+ P
Sbjct: 433 DIHSKEFGSGF-PVSNSKQNLSPEEKEYATSGWNLNVMPVLDQSVLCHINADISGMKVPW 491
Query: 225 VYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPL 284
+Y+ M+FS F WH EDH +S+NYLH G KTWYGVP AA EEV+++ E+
Sbjct: 492 LYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKM--LTPELFDS 549
Query: 285 VTFATLGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIA 344
L + T+++P + GVP R Q AGEFV+TFPRAYH GF+ G+N EA N
Sbjct: 550 QP-DLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFC 608
Query: 345 TPEWLNIAKDAAIRRASINYPPMVSHFQLL-----------YDLAIAMHSSIPVAVSAKP 393
T +WL + + + SH +L+ +LA+A+H + + V +
Sbjct: 609 TADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAAFPETLDLNLAVAVHKEMFIMVQEER 668
Query: 394 RSSR-LKDKNKDEGETLVKELFVQDVAQ 420
R + L +K E E EL D Q
Sbjct: 669 RLRKALLEKGVTEAEREAFELLPDDERQ 696
Score = 102 (41.0 bits), Expect = 1.7e-43, Sum P(2) = 1.7e-43
Identities = 20/35 (57%), Positives = 23/35 (65%)
Query: 18 PVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P F P+ AEFQDP+ YI KI A + GICKI
Sbjct: 12 PECPVFEPSWAEFQDPLGYIAKIRPIAEKSGICKI 46
>RGD|1305429 [details] [associations]
symbol:Kdm5a "lysine (K)-specific demethylase 5A" species:10116
"Rattus norvegicus" [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0019907 "cyclin-dependent protein
kinase activating kinase holoenzyme complex" evidence=ISO]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 RGD:1305429 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 HOGENOM:HOG000290719 HOVERGEN:HBG068574
IPI:IPI00781814 EMBL:BC099835 UniGene:Rn.206273 UniGene:Rn.224608
ProteinModelPortal:Q499M6 UCSC:RGD:1305429 InParanoid:Q499M6
Genevestigator:Q499M6 Uniprot:Q499M6
Length = 1099
Score = 408 (148.7 bits), Expect = 8.3e-43, Sum P(2) = 8.3e-43
Identities = 98/272 (36%), Positives = 143/272 (52%)
Query: 118 YTFQEFETKAKNFEKSYLKKCGNKKAALSALE-IESLYWK--ASVDKPFSVEYANDMP-- 172
YT Q F A NF+ Y N + E +E +W+ +S+++ VEY D+
Sbjct: 361 YTLQSFGEMADNFKSDYF----NMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADISSK 416
Query: 173 --GSAFVPVRK-IREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAM 229
GS F P++ R+ + E + WN+ + + S+L + +I G+ P +Y+ M
Sbjct: 417 DFGSGF-PIKDGQRKMLPEEEEYALSGWNLNNMPVLEQSVLAHINVDISGMKVPWLYVGM 475
Query: 230 LFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFAT 289
FS F WH EDH +S+NYLH G KTWYGVP AA EEV+R E+ P + +
Sbjct: 476 CFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMR------ELAPELFESQ 529
Query: 290 ---LGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATP 346
L + T+++P V + GVP R Q AGEFVVTFPRAYH GF+ G+N EA N T
Sbjct: 530 PDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTA 589
Query: 347 EWLNIAKDAAIRRASINYPPMVSHFQLLYDLA 378
+WL I + + + SH +L++ +A
Sbjct: 590 DWLPIGRQCVNHYRRLRRHCVFSHEELIFKMA 621
Score = 84 (34.6 bits), Expect = 8.3e-43, Sum P(2) = 8.3e-43
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 18 PVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P F P+ EF DP+++I +I A + GICKI
Sbjct: 17 PECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKI 51
>UNIPROTKB|E9PSW7 [details] [associations]
symbol:Jarid1a "Protein Jarid1a" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 IPI:IPI00781814
Ensembl:ENSRNOT00000056198 OMA:IRTRTRN ArrayExpress:E9PSW7
Uniprot:E9PSW7
Length = 1099
Score = 408 (148.7 bits), Expect = 8.3e-43, Sum P(2) = 8.3e-43
Identities = 98/272 (36%), Positives = 143/272 (52%)
Query: 118 YTFQEFETKAKNFEKSYLKKCGNKKAALSALE-IESLYWK--ASVDKPFSVEYANDMP-- 172
YT Q F A NF+ Y N + E +E +W+ +S+++ VEY D+
Sbjct: 361 YTLQSFGEMADNFKSDYF----NMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADISSK 416
Query: 173 --GSAFVPVRK-IREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAM 229
GS F P++ R+ + E + WN+ + + S+L + +I G+ P +Y+ M
Sbjct: 417 DFGSGF-PIKDGQRKMLPEEEEYALSGWNLNNMPVLEQSVLAHINVDISGMKVPWLYVGM 475
Query: 230 LFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFAT 289
FS F WH EDH +S+NYLH G KTWYGVP AA EEV+R E+ P + +
Sbjct: 476 CFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMR------ELAPELFESQ 529
Query: 290 ---LGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATP 346
L + T+++P V + GVP R Q AGEFVVTFPRAYH GF+ G+N EA N T
Sbjct: 530 PDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTA 589
Query: 347 EWLNIAKDAAIRRASINYPPMVSHFQLLYDLA 378
+WL I + + + SH +L++ +A
Sbjct: 590 DWLPIGRQCVNHYRRLRRHCVFSHEELIFKMA 621
Score = 84 (34.6 bits), Expect = 8.3e-43, Sum P(2) = 8.3e-43
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 18 PVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P F P+ EF DP+++I +I A + GICKI
Sbjct: 17 PECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKI 51
>FB|FBgn0031759 [details] [associations]
symbol:lid "little imaginal discs" species:7227 "Drosophila
melanogaster" [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=IMP] [GO:0043992
"histone acetyltransferase activity (H3-K9 specific)" evidence=IMP]
[GO:0034647 "histone demethylase activity (H3-trimethyl-K4
specific)" evidence=IMP] [GO:0034720 "histone H3-K4 demethylation"
evidence=IMP] [GO:0043970 "histone H3-K9 acetylation" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0045475 "locomotor rhythm" evidence=IMP] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0007275 GO:GO:0045893 EMBL:AE014134
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016706 GO:GO:0016702 GO:GO:0045475 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 GO:GO:0070822 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GeneTree:ENSGT00530000063118 GO:GO:0034647 KO:K11446 OMA:TEMVERE
EMBL:AY095051 RefSeq:NP_001245908.1 RefSeq:NP_001245909.1
RefSeq:NP_001245910.1 RefSeq:NP_523486.1 RefSeq:NP_723140.1
UniGene:Dm.2779 PDB:2LM1 PDBsum:2LM1 ProteinModelPortal:Q9VMJ7
SMR:Q9VMJ7 DIP:DIP-29330N IntAct:Q9VMJ7 MINT:MINT-1672742
STRING:Q9VMJ7 PaxDb:Q9VMJ7 PRIDE:Q9VMJ7 EnsemblMetazoa:FBtr0079231
EnsemblMetazoa:FBtr0079232 EnsemblMetazoa:FBtr0307069
EnsemblMetazoa:FBtr0307070 EnsemblMetazoa:FBtr0307071 GeneID:33837
KEGG:dme:Dmel_CG9088 CTD:33837 FlyBase:FBgn0031759
InParanoid:Q9VMJ7 OrthoDB:EOG408KPT PhylomeDB:Q9VMJ7
GenomeRNAi:33837 NextBio:785524 Bgee:Q9VMJ7 GO:GO:0043992
Uniprot:Q9VMJ7
Length = 1838
Score = 407 (148.3 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 97/293 (33%), Positives = 150/293 (51%)
Query: 100 CPR-KPRPVQKP-----VWQSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALE-IES 152
CPR V KP Q+ YT Q+F A F++ Y +K L E +E
Sbjct: 492 CPRCVVEEVSKPQEAFGFEQAEREYTLQQFGQMADQFKQEYFRK----PVHLVPTEMVER 547
Query: 153 LYWK--ASVDKPFSVEYANDMP----GSAFVPVRKIREAVGEGVTVGETPWNMRGVSRAK 206
+W+ +S+D+ +VEY D+ GS F P + + E+ WN+ + +
Sbjct: 548 EFWRIVSSIDEDVTVEYGADLHTMDHGSGF-PTKSSLYLLPGDQEYAESSWNLNNLPLLE 606
Query: 207 GSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAAN 266
S+L + +I G+ +P +Y+ M F+ F WH EDH +S+NYLH G KTWYGVP A
Sbjct: 607 DSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCAE 666
Query: 267 AFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRA 326
FEE ++ E + L + T+++P + + VP R Q+AGEFV+TFPRA
Sbjct: 667 QFEETMK-QAAPELFSSQPDL--LHQLVTIMNPNILMNNRVPVFRTDQHAGEFVITFPRA 723
Query: 327 YHMGFSHGFNCGEAANIATPEWLNIAKDAAIRRASINYPPMVSHFQLLYDLAI 379
YH GF+ G+N EA N A +WL + ++ + + + SH +L+ +A+
Sbjct: 724 YHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHDELVCKMAL 776
Score = 91 (37.1 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 19/37 (51%), Positives = 23/37 (62%)
Query: 16 TLPVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
T P P F PT EF++P+AYI KI A + GI KI
Sbjct: 157 TPPECPVFRPTTEEFKNPLAYISKIRSIAEKCGIAKI 193
>UNIPROTKB|E9PFH2 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC010889 HGNC:HGNC:11115 ChiTaRS:KDM5D IPI:IPI00644955
ProteinModelPortal:E9PFH2 SMR:E9PFH2 PRIDE:E9PFH2
Ensembl:ENST00000440077 ArrayExpress:E9PFH2 Bgee:E9PFH2
Uniprot:E9PFH2
Length = 1476
Score = 393 (143.4 bits), Expect = 1.2e-42, Sum P(2) = 1.2e-42
Identities = 105/328 (32%), Positives = 161/328 (49%)
Query: 113 QSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALE-IESLYWK--ASVDKPFSVEYAN 169
Q+ + Y+ Q F A +F+ Y N + E +E +W+ +S+++ +VEY
Sbjct: 336 QATQEYSLQSFGEMADSFKSDYF----NMPVHMVPTELVEKEFWRLVSSIEEDVTVEYGA 391
Query: 170 DMP----GSAFVPVRKIREAVG-EGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPM 224
D+ GS F PV ++ + E + WN+ + S+L + +I G+ P
Sbjct: 392 DIHSKEFGSGF-PVSNSKQNLSPEEKEYATSGWNLNVMPVLDQSVLCHINADISGMKVPW 450
Query: 225 VYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPL 284
+Y+ M+FS F WH EDH +S+NYLH G KTWYGVP AA EEV+++ E+
Sbjct: 451 LYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKM--LTPELFDS 508
Query: 285 VTFATLGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIA 344
L + T+++P + GVP R Q AGEFV+TFPRAYH GF+ G+N EA N
Sbjct: 509 QP-DLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFC 567
Query: 345 TPEWLNIAKDAAIRRASINYPPMVSHFQLL-----------YDLAIAMHSSIPVAVSAKP 393
T +WL + + + SH +L+ +LA+A+H + + V +
Sbjct: 568 TADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAAFPETLDLNLAVAVHKEMFIMVQEER 627
Query: 394 RSSR-LKDKNKDEGETLVKELFVQDVAQ 420
R + L +K E E EL D Q
Sbjct: 628 RLRKALLEKGVTEAEREAFELLPDDERQ 655
Score = 102 (41.0 bits), Expect = 1.2e-42, Sum P(2) = 1.2e-42
Identities = 20/35 (57%), Positives = 23/35 (65%)
Query: 18 PVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P F P+ AEFQDP+ YI KI A + GICKI
Sbjct: 12 PECPVFEPSWAEFQDPLGYIAKIRPIAEKSGICKI 46
>UNIPROTKB|Q9BY66 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=NAS] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IDA] [GO:0034720 "histone H3-K4 demethylation"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0007283 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 DrugBank:DB00126
Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:CH471202 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GO:GO:0032453 KO:K11446 HOGENOM:HOG000290719 OrthoDB:EOG4894KP
CTD:8284 EMBL:U52191 EMBL:D87072 EMBL:AF273841 EMBL:AC010889
EMBL:BC132721 EMBL:BC144102 EMBL:BC146767 EMBL:U52365 EMBL:AF134849
IPI:IPI00219940 IPI:IPI00329577 IPI:IPI00922879
RefSeq:NP_001140177.1 RefSeq:NP_001140178.1 RefSeq:NP_004644.2
UniGene:Hs.80358 PDB:2E6R PDB:2YQE PDBsum:2E6R PDBsum:2YQE
ProteinModelPortal:Q9BY66 SMR:Q9BY66 IntAct:Q9BY66 STRING:Q9BY66
PhosphoSite:Q9BY66 DMDM:17368706 PaxDb:Q9BY66 PRIDE:Q9BY66
Ensembl:ENST00000317961 Ensembl:ENST00000382806
Ensembl:ENST00000541639 GeneID:8284 KEGG:hsa:8284 UCSC:uc004fug.3
UCSC:uc010nwy.3 GeneCards:GC0YM021865 HGNC:HGNC:11115 MIM:426000
neXtProt:NX_Q9BY66 PharmGKB:PA35965 InParanoid:Q9BY66 OMA:TEMVERE
PhylomeDB:Q9BY66 ChiTaRS:KDM5D EvolutionaryTrace:Q9BY66
GenomeRNAi:8284 NextBio:31049 ArrayExpress:Q9BY66 Bgee:Q9BY66
CleanEx:HS_JARID1D Genevestigator:Q9BY66 GermOnline:ENSG00000012817
Uniprot:Q9BY66
Length = 1539
Score = 393 (143.4 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 105/328 (32%), Positives = 161/328 (49%)
Query: 113 QSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALE-IESLYWK--ASVDKPFSVEYAN 169
Q+ + Y+ Q F A +F+ Y N + E +E +W+ +S+++ +VEY
Sbjct: 377 QATQEYSLQSFGEMADSFKSDYF----NMPVHMVPTELVEKEFWRLVSSIEEDVTVEYGA 432
Query: 170 DMP----GSAFVPVRKIREAVG-EGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPM 224
D+ GS F PV ++ + E + WN+ + S+L + +I G+ P
Sbjct: 433 DIHSKEFGSGF-PVSNSKQNLSPEEKEYATSGWNLNVMPVLDQSVLCHINADISGMKVPW 491
Query: 225 VYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPL 284
+Y+ M+FS F WH EDH +S+NYLH G KTWYGVP AA EEV+++ E+
Sbjct: 492 LYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKM--LTPELFDS 549
Query: 285 VTFATLGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIA 344
L + T+++P + GVP R Q AGEFV+TFPRAYH GF+ G+N EA N
Sbjct: 550 QP-DLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFC 608
Query: 345 TPEWLNIAKDAAIRRASINYPPMVSHFQLL-----------YDLAIAMHSSIPVAVSAKP 393
T +WL + + + SH +L+ +LA+A+H + + V +
Sbjct: 609 TADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAAFPETLDLNLAVAVHKEMFIMVQEER 668
Query: 394 RSSR-LKDKNKDEGETLVKELFVQDVAQ 420
R + L +K E E EL D Q
Sbjct: 669 RLRKALLEKGVTEAEREAFELLPDDERQ 696
Score = 102 (41.0 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 20/35 (57%), Positives = 23/35 (65%)
Query: 18 PVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P F P+ AEFQDP+ YI KI A + GICKI
Sbjct: 12 PECPVFEPSWAEFQDPLGYIAKIRPIAEKSGICKI 46
>UNIPROTKB|E9PSM3 [details] [associations]
symbol:Jarid1a "Protein Jarid1a" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005737 GO:GO:0045893 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 IPI:IPI00365351
Ensembl:ENSRNOT00000034548 NextBio:665124 ArrayExpress:E9PSM3
Uniprot:E9PSM3
Length = 1690
Score = 408 (148.7 bits), Expect = 3.6e-42, Sum P(2) = 3.6e-42
Identities = 98/272 (36%), Positives = 143/272 (52%)
Query: 118 YTFQEFETKAKNFEKSYLKKCGNKKAALSALE-IESLYWK--ASVDKPFSVEYANDMP-- 172
YT Q F A NF+ Y N + E +E +W+ +S+++ VEY D+
Sbjct: 361 YTLQSFGEMADNFKSDYF----NMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADISSK 416
Query: 173 --GSAFVPVRK-IREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAM 229
GS F P++ R+ + E + WN+ + + S+L + +I G+ P +Y+ M
Sbjct: 417 DFGSGF-PIKDGQRKMLPEEEEYALSGWNLNNMPVLEQSVLAHINVDISGMKVPWLYVGM 475
Query: 230 LFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFAT 289
FS F WH EDH +S+NYLH G KTWYGVP AA EEV+R E+ P + +
Sbjct: 476 CFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMR------ELAPELFESQ 529
Query: 290 ---LGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATP 346
L + T+++P V + GVP R Q AGEFVVTFPRAYH GF+ G+N EA N T
Sbjct: 530 PDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTA 589
Query: 347 EWLNIAKDAAIRRASINYPPMVSHFQLLYDLA 378
+WL I + + + SH +L++ +A
Sbjct: 590 DWLPIGRQCVNHYRRLRRHCVFSHEELIFKMA 621
Score = 84 (34.6 bits), Expect = 3.6e-42, Sum P(2) = 3.6e-42
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 18 PVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P F P+ EF DP+++I +I A + GICKI
Sbjct: 17 PECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKI 51
>MGI|MGI:2136980 [details] [associations]
symbol:Kdm5a "lysine (K)-specific demethylase 5A"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
MGI:MGI:2136980 GO:GO:0007275 GO:GO:0005737 GO:GO:0045893
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 GeneTree:ENSGT00530000063118 KO:K11446 CTD:5927
HOGENOM:HOG000290719 OMA:ECSKPRE ChiTaRS:KDM5A EMBL:AC155720
EMBL:AC078896 EMBL:AK135085 EMBL:AK144877 EMBL:AK166055
EMBL:BC080691 IPI:IPI00849089 RefSeq:NP_666109.2 UniGene:Mm.404761
UniGene:Mm.463658 ProteinModelPortal:Q3UXZ9 SMR:Q3UXZ9
IntAct:Q3UXZ9 STRING:Q3UXZ9 PhosphoSite:Q3UXZ9 PaxDb:Q3UXZ9
PRIDE:Q3UXZ9 Ensembl:ENSMUST00000100996 GeneID:214899
KEGG:mmu:214899 UCSC:uc009dne.2 InParanoid:Q3UXZ9 NextBio:374501
Bgee:Q3UXZ9 CleanEx:MM_RBP2 Genevestigator:Q3UXZ9 Uniprot:Q3UXZ9
Length = 1690
Score = 407 (148.3 bits), Expect = 4.5e-42, Sum P(2) = 4.5e-42
Identities = 98/276 (35%), Positives = 142/276 (51%)
Query: 113 QSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALE-IESLYWK--ASVDKPFSVEYAN 169
Q+ YT Q F A NF+ Y N + E +E +W+ +S+++ VEY
Sbjct: 356 QAVREYTLQSFGEMADNFKSDYF----NMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGA 411
Query: 170 DMP----GSAFVPVRKIREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPMV 225
D+ GS F R+ + E + WN+ + + S+L + +I G+ P +
Sbjct: 412 DISSKDFGSGFPKKDGQRKMLPEEEEYALSGWNLNNMPVLEQSVLAHINVDISGMKVPWL 471
Query: 226 YIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLV 285
Y+ M FS F WH EDH +S+NYLH G KTWYGVP AA EEV+R E+ P +
Sbjct: 472 YVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMR------ELAPEL 525
Query: 286 TFAT---LGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAAN 342
+ L + T+++P V + GVP R Q AGEFVVTFPRAYH GF+ G+N EA N
Sbjct: 526 FESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVN 585
Query: 343 IATPEWLNIAKDAAIRRASINYPPMVSHFQLLYDLA 378
T +WL I + + + SH +L++ +A
Sbjct: 586 FCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMA 621
Score = 84 (34.6 bits), Expect = 4.5e-42, Sum P(2) = 4.5e-42
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 18 PVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P F P+ EF DP+++I +I A + GICKI
Sbjct: 17 PECPVFEPSWEEFTDPLSFIGRIRPFAEKTGICKI 51
>MGI|MGI:99780 [details] [associations]
symbol:Kdm5d "lysine (K)-specific demethylase 5D"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034720
"histone H3-K4 demethylation" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
MGI:MGI:99780 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GeneTree:ENSGT00530000063118
GO:GO:0032453 KO:K11446 HOGENOM:HOG000290719 OrthoDB:EOG4894KP
CTD:8284 EMBL:AF127244 EMBL:AK140971 EMBL:BC059077 EMBL:Z29652
IPI:IPI00123375 IPI:IPI00848809 IPI:IPI00848997 IPI:IPI00850747
PIR:I48776 RefSeq:NP_035549.1 UniGene:Mm.262676
ProteinModelPortal:Q62240 SMR:Q62240 STRING:Q62240
PhosphoSite:Q62240 PRIDE:Q62240 Ensembl:ENSMUST00000055032
GeneID:20592 KEGG:mmu:20592 UCSC:uc009uyz.1 UCSC:uc009uzb.1
InParanoid:Q62240 NextBio:298905 Bgee:Q62240 Genevestigator:Q62240
GermOnline:ENSMUSG00000056673 Uniprot:Q62240
Length = 1548
Score = 390 (142.3 bits), Expect = 7.5e-42, Sum P(2) = 7.5e-42
Identities = 106/329 (32%), Positives = 161/329 (48%)
Query: 113 QSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALEI-ESLYWK--ASVDKPFSVEYAN 169
Q+ + YT Q F A +F+ Y N + E+ E +W+ +S+++ +VEY
Sbjct: 386 QATQEYTLQSFGEMADSFKADYF----NMPVHMVPTEVVEKEFWRLVSSIEEDVTVEYGA 441
Query: 170 DMP----GSAFVPVRKIR-EAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPM 224
D+ GS F PV + + E WN+ + S+L + +I G+ P
Sbjct: 442 DIHSKEFGSGF-PVNNSKWDLSPEEKEYAACGWNLNVMPVLDQSVLCHINADISGMKVPW 500
Query: 225 VYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVV-RVHGYGEEINP 283
+Y+ M+FS F WH EDH +S+NYLH G KTWYGVP AA E+V+ R+ + P
Sbjct: 501 LYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEDVMKRLTPELFDSQP 560
Query: 284 LVTFATLGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANI 343
+ L + T+++P + GVP R Q AGEFV+TFPRAYH GF+ G+N EA N
Sbjct: 561 DL----LHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNF 616
Query: 344 ATPEWLNIAKDAAIRRASINYPPMVSHFQLL-----------YDLAIAMHSSIPVAVSAK 392
T +WL + + + + SH +L+ +LA+A+H + + V +
Sbjct: 617 CTADWLPVGRQCIEHYRRLRRYCVFSHEELICKMAAFPEKLDLNLAVAVHKEMFIMVQEE 676
Query: 393 PRSSR-LKDKNKDEGETLVKELFVQDVAQ 420
R + L +K E E EL D Q
Sbjct: 677 RRLRKTLLEKGITEAEREAFELLPDDERQ 705
Score = 98 (39.6 bits), Expect = 7.5e-42, Sum P(2) = 7.5e-42
Identities = 19/35 (54%), Positives = 23/35 (65%)
Query: 18 PVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P F P+ AEF+DP+ YI KI A + GICKI
Sbjct: 12 PECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKI 46
>UNIPROTKB|Q30DN6 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016568 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:O43918
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
KO:K11446 EMBL:DQ156494 RefSeq:NP_001106929.1 UniGene:Cfa.38975
ProteinModelPortal:Q30DN6 SMR:Q30DN6 GeneID:100134936
KEGG:cfa:100134936 CTD:8284 NextBio:20789320 Uniprot:Q30DN6
Length = 1545
Score = 388 (141.6 bits), Expect = 7.5e-42, Sum P(2) = 7.5e-42
Identities = 106/329 (32%), Positives = 161/329 (48%)
Query: 113 QSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALE-IESLYWK--ASVDKPFSVEYAN 169
Q+ + YT Q F A +F+ Y + + E +E +W+ +S+++ +VEY
Sbjct: 380 QATQEYTLQSFGEMADSFKADYF----SMPVHMVPTELVEKEFWRLVSSIEEDVTVEYGA 435
Query: 170 DMP----GSAFVPVRKIREAVG-EGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPM 224
D+ GS F PV + + E + WN+ + S+L + +I G+ P
Sbjct: 436 DIHSKEFGSGF-PVSSSQRILSPEEEEYATSGWNLNVMPVLDQSVLCHINADISGMKVPW 494
Query: 225 VYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVV-RVHGYGEEINP 283
+Y+ M+FS F WH EDH +S+NYLH G KTWYGVP AA EEV+ R+ + P
Sbjct: 495 LYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEQLEEVMKRLTPELFDSQP 554
Query: 284 LVTFATLGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANI 343
+ L + T+++P + GVP R Q AGEFV+TFPRAYH GF+ G+N EA N
Sbjct: 555 DL----LHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNF 610
Query: 344 ATPEWLNIAKDAAIRRASINYPPMVSHFQLL-----------YDLAIAMHSSIPVAVSAK 392
T +WL + + + SH +L+ +LA+A+H + + V +
Sbjct: 611 CTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAAFPEKLDLNLAVAVHKEMFIMVQEE 670
Query: 393 PRSSR-LKDKNKDEGETLVKELFVQDVAQ 420
R + L +K E E EL D Q
Sbjct: 671 RRLRKALLEKGITEAEREAFELLPDDERQ 699
Score = 100 (40.3 bits), Expect = 7.5e-42, Sum P(2) = 7.5e-42
Identities = 20/35 (57%), Positives = 23/35 (65%)
Query: 18 PVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P F PT AEF+DP+ YI KI A + GICKI
Sbjct: 12 PECPVFEPTWAEFRDPLDYITKIRPIAEKSGICKI 46
>UNIPROTKB|A1YVX4 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
KO:K11446 CTD:8242 EMBL:EF139241 RefSeq:NP_001090902.1
UniGene:Ssc.25162 ProteinModelPortal:A1YVX4 SMR:A1YVX4
GeneID:100037295 KEGG:ssc:100037295 Uniprot:A1YVX4
Length = 1516
Score = 386 (140.9 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 105/330 (31%), Positives = 157/330 (47%)
Query: 113 QSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALE-IESLYWKA--SVDKPFSVEYAN 169
Q+ YT Q F A +F+ Y N + E +E +W+ S+++ +VEY
Sbjct: 346 QATREYTLQSFGEMADSFKADY----SNMPVHMVPTELVEKEFWRLVNSIEEDVTVEYGA 401
Query: 170 DMP----GSAFVPVRKIREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPMV 225
D+ GS F R E + WN+ + + S+L + +I G+ P +
Sbjct: 402 DIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWL 461
Query: 226 YIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLV 285
Y+ M+FS F WH EDH +S+NYLH G KTWYGVP AA EEV++ ++ P +
Sbjct: 462 YVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMK------KLTPEL 515
Query: 286 TFAT---LGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAAN 342
+ L + T+++P + GVP R Q AGEFV+TFPRAYH GF+ G+N EA N
Sbjct: 516 FDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVN 575
Query: 343 IATPEWLNIAKDAAIRRASINYPPMVSHFQLL-----------YDLAIAMHSSIPVAVSA 391
T +WL + + + SH +L+ +LA A+H + + V
Sbjct: 576 FCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHKEMFIMVQE 635
Query: 392 KPRSSR-LKDKNKDEGETLVKELFVQDVAQ 420
+ R + L +K E E EL D Q
Sbjct: 636 ERRLRKALLEKGITEAEREAFELLPDDERQ 665
Score = 98 (39.6 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 19/35 (54%), Positives = 23/35 (65%)
Query: 18 PVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P F P+ AEF+DP+ YI KI A + GICKI
Sbjct: 12 PECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKI 46
>UNIPROTKB|F1RUI7 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9823
"Sus scrofa" [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0032453 OMA:ISWQGRA
EMBL:FP102491 Ensembl:ENSSSCT00000013473 ArrayExpress:F1RUI7
Uniprot:F1RUI7
Length = 1516
Score = 386 (140.9 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 105/330 (31%), Positives = 157/330 (47%)
Query: 113 QSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALE-IESLYWKA--SVDKPFSVEYAN 169
Q+ YT Q F A +F+ Y N + E +E +W+ S+++ +VEY
Sbjct: 346 QATREYTLQSFGEMADSFKADYF----NMPVHMVPTELVEKEFWRLVNSIEEDVTVEYGA 401
Query: 170 DMP----GSAFVPVRKIREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPMV 225
D+ GS F R E + WN+ + + S+L + +I G+ P +
Sbjct: 402 DIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWL 461
Query: 226 YIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLV 285
Y+ M+FS F WH EDH +S+NYLH G KTWYGVP AA EEV++ ++ P +
Sbjct: 462 YVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMK------KLTPEL 515
Query: 286 TFAT---LGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAAN 342
+ L + T+++P + GVP R Q AGEFV+TFPRAYH GF+ G+N EA N
Sbjct: 516 FDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVN 575
Query: 343 IATPEWLNIAKDAAIRRASINYPPMVSHFQLL-----------YDLAIAMHSSIPVAVSA 391
T +WL + + + SH +L+ +LA A+H + + V
Sbjct: 576 FCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHKEMFIMVQE 635
Query: 392 KPRSSR-LKDKNKDEGETLVKELFVQDVAQ 420
+ R + L +K E E EL D Q
Sbjct: 636 ERRLRKALLEKGITEAEREAFELLPDDERQ 665
Score = 98 (39.6 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 19/35 (54%), Positives = 23/35 (65%)
Query: 18 PVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P F P+ AEF+DP+ YI KI A + GICKI
Sbjct: 12 PECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKI 46
>UNIPROTKB|E2R0S2 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ISWQGRA EMBL:AAEX03026384
Ensembl:ENSCAFT00000025665 Uniprot:E2R0S2
Length = 1520
Score = 386 (140.9 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 105/330 (31%), Positives = 157/330 (47%)
Query: 113 QSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALE-IESLYWKA--SVDKPFSVEYAN 169
Q+ YT Q F A +F+ Y N + E +E +W+ S+++ +VEY
Sbjct: 387 QATREYTLQSFGEMADSFKADYF----NMPVHMVPTELVEKEFWRLVNSIEEDVTVEYGA 442
Query: 170 DMP----GSAFVPVRKIREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPMV 225
D+ GS F R E + WN+ + + S+L + +I G+ P +
Sbjct: 443 DIHSKEFGSGFPVSDNKRHLTPEEEEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWL 502
Query: 226 YIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLV 285
Y+ M+FS F WH EDH +S+NYLH G KTWYGVP AA EEV++ ++ P +
Sbjct: 503 YVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMK------KLTPEL 556
Query: 286 TFAT---LGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAAN 342
+ L + T+++P + GVP R Q AGEFV+TFPRAYH GF+ G+N EA N
Sbjct: 557 FDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVN 616
Query: 343 IATPEWLNIAKDAAIRRASINYPPMVSHFQLL-----------YDLAIAMHSSIPVAVSA 391
T +WL + + + SH +L+ +LA A+H + + V
Sbjct: 617 FCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHKEMFIMVQE 676
Query: 392 KPRSSR-LKDKNKDEGETLVKELFVQDVAQ 420
+ R + L +K E E EL D Q
Sbjct: 677 ERRLRKALLEKGITEAEREAFELLPDDERQ 706
Score = 98 (39.6 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 19/35 (54%), Positives = 23/35 (65%)
Query: 18 PVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P F P+ AEF+DP+ YI KI A + GICKI
Sbjct: 12 PECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKI 46
>MGI|MGI:99781 [details] [associations]
symbol:Kdm5c "lysine (K)-specific demethylase 5C"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034720
"histone H3-K4 demethylation" evidence=ISO] [GO:0042802 "identical
protein binding" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
MGI:MGI:99781 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 GeneTree:ENSGT00530000063118 GO:GO:0032453
KO:K11446 CTD:8242 OrthoDB:EOG4894KP ChiTaRS:KDM5C EMBL:AF127245
EMBL:AK008105 EMBL:AK155279 EMBL:AK155427 EMBL:AK155651
EMBL:AK158340 EMBL:AK011577 EMBL:BC043096 EMBL:BC054550 EMBL:Z29651
EMBL:AK129096 EMBL:L29563 EMBL:AF039894 IPI:IPI00112611
IPI:IPI00221399 IPI:IPI00776021 PIR:I48775 PIR:I84689
RefSeq:NP_038696.2 UniGene:Mm.142655 ProteinModelPortal:P41230
SMR:P41230 STRING:P41230 PhosphoSite:P41230 PaxDb:P41230
PRIDE:P41230 Ensembl:ENSMUST00000082177 Ensembl:ENSMUST00000112584
Ensembl:ENSMUST00000112588 GeneID:20591 KEGG:mmu:20591
UCSC:uc009uqc.2 UCSC:uc009uqd.2 UCSC:uc009uqe.2 InParanoid:P41230
NextBio:298901 Bgee:P41230 Genevestigator:P41230
GermOnline:ENSMUSG00000025332 Uniprot:P41230
Length = 1554
Score = 386 (140.9 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
Identities = 105/330 (31%), Positives = 157/330 (47%)
Query: 113 QSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALE-IESLYWKA--SVDKPFSVEYAN 169
Q+ YT Q F A +F+ Y N + E +E +W+ S+++ +VEY
Sbjct: 387 QATREYTLQSFGEMADSFKADYF----NMPVHMVPTELVEKEFWRLVNSIEEDVTVEYGA 442
Query: 170 DMP----GSAFVPVRKIREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPMV 225
D+ GS F R E + WN+ + + S+L + +I G+ P +
Sbjct: 443 DIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWL 502
Query: 226 YIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLV 285
Y+ M+FS F WH EDH +S+NYLH G KTWYGVP AA EEV++ ++ P +
Sbjct: 503 YVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMK------KLTPEL 556
Query: 286 TFAT---LGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAAN 342
+ L + T+++P + GVP R Q AGEFV+TFPRAYH GF+ G+N EA N
Sbjct: 557 FDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVN 616
Query: 343 IATPEWLNIAKDAAIRRASINYPPMVSHFQLL-----------YDLAIAMHSSIPVAVSA 391
T +WL + + + SH +L+ +LA A+H + + V
Sbjct: 617 FCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHKEMFIMVQE 676
Query: 392 KPRSSR-LKDKNKDEGETLVKELFVQDVAQ 420
+ R + L +K E E EL D Q
Sbjct: 677 ERRLRKALLEKGITEAEREAFELLPDDERQ 706
Score = 98 (39.6 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
Identities = 19/35 (54%), Positives = 23/35 (65%)
Query: 18 PVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P F P+ AEF+DP+ YI KI A + GICKI
Sbjct: 12 PECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKI 46
>UNIPROTKB|F1MYV2 [details] [associations]
symbol:KDM5C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0032453 KO:K11446 CTD:8242
OMA:ISWQGRA EMBL:DAAA02073278 IPI:IPI00703369 RefSeq:NP_776610.2
UniGene:Bt.8145 PRIDE:F1MYV2 Ensembl:ENSBTAT00000019893
GeneID:281490 KEGG:bta:281490 NextBio:20805465 ArrayExpress:F1MYV2
Uniprot:F1MYV2
Length = 1555
Score = 386 (140.9 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
Identities = 105/330 (31%), Positives = 157/330 (47%)
Query: 113 QSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALE-IESLYWKA--SVDKPFSVEYAN 169
Q+ YT Q F A +F+ Y N + E +E +W+ S+++ +VEY
Sbjct: 387 QATREYTLQSFGEMADSFKADYF----NMPVHMVPTELVEKEFWRLVNSIEEDVTVEYGA 442
Query: 170 DMP----GSAFVPVRKIREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPMV 225
D+ GS F R E + WN+ + + S+L + +I G+ P +
Sbjct: 443 DIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWL 502
Query: 226 YIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLV 285
Y+ M+FS F WH EDH +S+NYLH G KTWYGVP AA EEV++ ++ P +
Sbjct: 503 YVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMK------KLTPEL 556
Query: 286 TFAT---LGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAAN 342
+ L + T+++P + GVP R Q AGEFV+TFPRAYH GF+ G+N EA N
Sbjct: 557 FDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVN 616
Query: 343 IATPEWLNIAKDAAIRRASINYPPMVSHFQLL-----------YDLAIAMHSSIPVAVSA 391
T +WL + + + SH +L+ +LA A+H + + V
Sbjct: 617 FCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHKEMFIMVQE 676
Query: 392 KPRSSR-LKDKNKDEGETLVKELFVQDVAQ 420
+ R + L +K E E EL D Q
Sbjct: 677 ERRLRKALLEKGITEAEREAFELLPDDERQ 706
Score = 98 (39.6 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
Identities = 19/35 (54%), Positives = 23/35 (65%)
Query: 18 PVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P F P+ AEF+DP+ YI KI A + GICKI
Sbjct: 12 PECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKI 46
>UNIPROTKB|Q38JA7 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:O43918
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 KO:K11446 EMBL:DQ223016 RefSeq:NP_001041497.1
UniGene:Cfa.46487 ProteinModelPortal:Q38JA7 SMR:Q38JA7 PRIDE:Q38JA7
GeneID:491894 KEGG:cfa:491894 CTD:8242 InParanoid:Q38JA7
OrthoDB:EOG4894KP NextBio:20864597 Uniprot:Q38JA7
Length = 1556
Score = 386 (140.9 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
Identities = 105/330 (31%), Positives = 157/330 (47%)
Query: 113 QSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALE-IESLYWKA--SVDKPFSVEYAN 169
Q+ YT Q F A +F+ Y N + E +E +W+ S+++ +VEY
Sbjct: 387 QATREYTLQSFGEMADSFKADYF----NMPVHMVPTELVEKEFWRLVNSIEEDVTVEYGA 442
Query: 170 DMP----GSAFVPVRKIREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPMV 225
D+ GS F R E + WN+ + + S+L + +I G+ P +
Sbjct: 443 DIHSKEFGSGFPVSDNKRHLTPEEEEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWL 502
Query: 226 YIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLV 285
Y+ M+FS F WH EDH +S+NYLH G KTWYGVP AA EEV++ ++ P +
Sbjct: 503 YVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMK------KLTPEL 556
Query: 286 TFAT---LGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAAN 342
+ L + T+++P + GVP R Q AGEFV+TFPRAYH GF+ G+N EA N
Sbjct: 557 FDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVN 616
Query: 343 IATPEWLNIAKDAAIRRASINYPPMVSHFQLL-----------YDLAIAMHSSIPVAVSA 391
T +WL + + + SH +L+ +LA A+H + + V
Sbjct: 617 FCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHKEMFIMVQE 676
Query: 392 KPRSSR-LKDKNKDEGETLVKELFVQDVAQ 420
+ R + L +K E E EL D Q
Sbjct: 677 ERRLRKALLEKGITEAEREAFELLPDDERQ 706
Score = 98 (39.6 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
Identities = 19/35 (54%), Positives = 23/35 (65%)
Query: 18 PVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P F P+ AEF+DP+ YI KI A + GICKI
Sbjct: 12 PECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKI 46
>UNIPROTKB|B0QZ44 [details] [associations]
symbol:KDM5C "Smcy homolog, X-linked (Mouse), isoform
CRA_a" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:CH471154 EMBL:AL139396 HOGENOM:HOG000290719
UniGene:Hs.631768 HGNC:HGNC:11114 ChiTaRS:KDM5C IPI:IPI00879547
SMR:B0QZ44 Ensembl:ENST00000404049 UCSC:uc004dsa.3
HOVERGEN:HBG068574 Uniprot:B0QZ44
Length = 1559
Score = 386 (140.9 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
Identities = 105/330 (31%), Positives = 157/330 (47%)
Query: 113 QSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALE-IESLYWKA--SVDKPFSVEYAN 169
Q+ YT Q F A +F+ Y N + E +E +W+ S+++ +VEY
Sbjct: 386 QATREYTLQSFGEMADSFKADYF----NMPVHMVPTELVEKEFWRLVNSIEEDVTVEYGA 441
Query: 170 DMP----GSAFVPVRKIREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPMV 225
D+ GS F R E + WN+ + + S+L + +I G+ P +
Sbjct: 442 DIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWL 501
Query: 226 YIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLV 285
Y+ M+FS F WH EDH +S+NYLH G KTWYGVP AA EEV++ ++ P +
Sbjct: 502 YVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMK------KLTPEL 555
Query: 286 TFAT---LGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAAN 342
+ L + T+++P + GVP R Q AGEFV+TFPRAYH GF+ G+N EA N
Sbjct: 556 FDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVN 615
Query: 343 IATPEWLNIAKDAAIRRASINYPPMVSHFQLL-----------YDLAIAMHSSIPVAVSA 391
T +WL + + + SH +L+ +LA A+H + + V
Sbjct: 616 FCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHKEMFIMVQE 675
Query: 392 KPRSSR-LKDKNKDEGETLVKELFVQDVAQ 420
+ R + L +K E E EL D Q
Sbjct: 676 ERRLRKALLEKGITEAEREAFELLPDDERQ 705
Score = 98 (39.6 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
Identities = 19/35 (54%), Positives = 23/35 (65%)
Query: 18 PVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P F P+ AEF+DP+ YI KI A + GICKI
Sbjct: 12 PECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKI 46
>UNIPROTKB|P41229 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IDA] [GO:0034720 "histone H3-K4 demethylation"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:AL139396
eggNOG:NOG327026 GO:GO:0032453 KO:K11446 HOGENOM:HOG000290719
CTD:8242 OrthoDB:EOG4894KP EMBL:L25270 EMBL:AK304732 EMBL:BC054499
EMBL:Z29650 IPI:IPI00013185 IPI:IPI00219412 IPI:IPI00640875
IPI:IPI01012687 PIR:I54361 RefSeq:NP_001140174.1 RefSeq:NP_004178.2
UniGene:Hs.631768 PDB:2JRZ PDBsum:2JRZ ProteinModelPortal:P41229
SMR:P41229 DIP:DIP-39663N IntAct:P41229 STRING:P41229
PhosphoSite:P41229 DMDM:117949812 PaxDb:P41229 PRIDE:P41229
DNASU:8242 Ensembl:ENST00000375379 Ensembl:ENST00000375383
Ensembl:ENST00000375401 Ensembl:ENST00000452825 GeneID:8242
KEGG:hsa:8242 UCSC:uc004drz.3 GeneCards:GC0XM053237 HGNC:HGNC:11114
MIM:300534 MIM:314690 neXtProt:NX_P41229 Orphanet:85279
PharmGKB:PA35964 InParanoid:P41229 OMA:ISWQGRA PhylomeDB:P41229
ChiTaRS:KDM5C EvolutionaryTrace:P41229 GenomeRNAi:8242
NextBio:31002 ArrayExpress:P41229 Bgee:P41229 CleanEx:HS_JARID1C
Genevestigator:P41229 GermOnline:ENSG00000126012 Uniprot:P41229
Length = 1560
Score = 386 (140.9 bits), Expect = 2.1e-41, Sum P(2) = 2.1e-41
Identities = 105/330 (31%), Positives = 157/330 (47%)
Query: 113 QSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALE-IESLYWKA--SVDKPFSVEYAN 169
Q+ YT Q F A +F+ Y N + E +E +W+ S+++ +VEY
Sbjct: 387 QATREYTLQSFGEMADSFKADYF----NMPVHMVPTELVEKEFWRLVNSIEEDVTVEYGA 442
Query: 170 DMP----GSAFVPVRKIREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPMV 225
D+ GS F R E + WN+ + + S+L + +I G+ P +
Sbjct: 443 DIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWL 502
Query: 226 YIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLV 285
Y+ M+FS F WH EDH +S+NYLH G KTWYGVP AA EEV++ ++ P +
Sbjct: 503 YVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMK------KLTPEL 556
Query: 286 TFAT---LGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAAN 342
+ L + T+++P + GVP R Q AGEFV+TFPRAYH GF+ G+N EA N
Sbjct: 557 FDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVN 616
Query: 343 IATPEWLNIAKDAAIRRASINYPPMVSHFQLL-----------YDLAIAMHSSIPVAVSA 391
T +WL + + + SH +L+ +LA A+H + + V
Sbjct: 617 FCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHKEMFIMVQE 676
Query: 392 KPRSSR-LKDKNKDEGETLVKELFVQDVAQ 420
+ R + L +K E E EL D Q
Sbjct: 677 ERRLRKALLEKGITEAEREAFELLPDDERQ 706
Score = 98 (39.6 bits), Expect = 2.1e-41, Sum P(2) = 2.1e-41
Identities = 19/35 (54%), Positives = 23/35 (65%)
Query: 18 PVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P F P+ AEF+DP+ YI KI A + GICKI
Sbjct: 12 PECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKI 46
>UNIPROTKB|K7GNM7 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:FP102491
Ensembl:ENSSSCT00000032687 Uniprot:K7GNM7
Length = 1560
Score = 386 (140.9 bits), Expect = 2.1e-41, Sum P(2) = 2.1e-41
Identities = 105/330 (31%), Positives = 157/330 (47%)
Query: 113 QSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALE-IESLYWKA--SVDKPFSVEYAN 169
Q+ YT Q F A +F+ Y N + E +E +W+ S+++ +VEY
Sbjct: 387 QATREYTLQSFGEMADSFKADYF----NMPVHMVPTELVEKEFWRLVNSIEEDVTVEYGA 442
Query: 170 DMP----GSAFVPVRKIREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPMV 225
D+ GS F R E + WN+ + + S+L + +I G+ P +
Sbjct: 443 DIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWL 502
Query: 226 YIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLV 285
Y+ M+FS F WH EDH +S+NYLH G KTWYGVP AA EEV++ ++ P +
Sbjct: 503 YVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMK------KLTPEL 556
Query: 286 TFAT---LGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAAN 342
+ L + T+++P + GVP R Q AGEFV+TFPRAYH GF+ G+N EA N
Sbjct: 557 FDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVN 616
Query: 343 IATPEWLNIAKDAAIRRASINYPPMVSHFQLL-----------YDLAIAMHSSIPVAVSA 391
T +WL + + + SH +L+ +LA A+H + + V
Sbjct: 617 FCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDLNLAAAVHKEMFIMVQE 676
Query: 392 KPRSSR-LKDKNKDEGETLVKELFVQDVAQ 420
+ R + L +K E E EL D Q
Sbjct: 677 ERRLRKALLEKGITEAEREAFELLPDDERQ 706
Score = 98 (39.6 bits), Expect = 2.1e-41, Sum P(2) = 2.1e-41
Identities = 19/35 (54%), Positives = 23/35 (65%)
Query: 18 PVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P F P+ AEF+DP+ YI KI A + GICKI
Sbjct: 12 PECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKI 46
>ZFIN|ZDB-GENE-060810-94 [details] [associations]
symbol:kdm5c "lysine (K)-specific demethylase 5C"
species:7955 "Danio rerio" [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
ZFIN:ZDB-GENE-060810-94 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0043524 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063118 KO:K11446
HOGENOM:HOG000290719 CTD:8242 OMA:ISWQGRA HOVERGEN:HBG068574
EMBL:BX537348 IPI:IPI00611775 RefSeq:NP_001116706.1
UniGene:Dr.75967 SMR:B0S6L0 Ensembl:ENSDART00000098657
Ensembl:ENSDART00000127053 GeneID:553406 KEGG:dre:553406
NextBio:20880164 Uniprot:B0S6L0
Length = 1578
Score = 392 (143.0 bits), Expect = 2.7e-41, Sum P(2) = 2.7e-41
Identities = 93/248 (37%), Positives = 132/248 (53%)
Query: 113 QSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALE-IESLYWK--ASVDKPFSVEYAN 169
Q+ YT Q F A F+ Y N + E +E +W+ +S+++ +VEY
Sbjct: 421 QATREYTLQSFGEMADTFKADYF----NMPVHMVPTELVEKEFWRLVSSIEEDVTVEYGA 476
Query: 170 DMP----GSAFVPVRK-IREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPM 224
D+ GS F PV R+ E + WN+ + + SLL + +I G+ P
Sbjct: 477 DIHSKEFGSGF-PVNNGKRQLSEEEEEYARSGWNLNVMPVLEQSLLCHINADISGMKVPW 535
Query: 225 VYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINP- 283
+Y+ M+FS F WH EDH +S+NYLH G KTWYGVP AA EEV++ ++ P
Sbjct: 536 LYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPCSAAEKLEEVMK------KLTPE 589
Query: 284 LVTFAT--LGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAA 341
L F L + T+++P + + GVP R Q AGEFV+TFPRAYH GF+ G+N EA
Sbjct: 590 LFEFQPDLLHQLVTIMNPNILMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAV 649
Query: 342 NIATPEWL 349
N T +WL
Sbjct: 650 NFCTADWL 657
Score = 91 (37.1 bits), Expect = 2.7e-41, Sum P(2) = 2.7e-41
Identities = 18/35 (51%), Positives = 21/35 (60%)
Query: 18 PVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P F P+ EF DP+ YI KI A + GICKI
Sbjct: 12 PECPVFEPSWEEFADPLGYIAKIRPIAEKSGICKI 46
>UNIPROTKB|D4A3B4 [details] [associations]
symbol:D4A3B4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 IPI:IPI00949627
Ensembl:ENSRNOT00000067288 ArrayExpress:D4A3B4 Uniprot:D4A3B4
Length = 1490
Score = 379 (138.5 bits), Expect = 9.9e-41, Sum P(2) = 9.9e-41
Identities = 92/276 (33%), Positives = 138/276 (50%)
Query: 113 QSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALE-IESLYWKA--SVDKPFSVEYAN 169
Q+ YT Q F A +F+ Y N + E +E +W+ S+++ +VEY
Sbjct: 346 QATREYTLQSFGEMADSFKADYF----NMPVHMVPTELVEKEFWRLVNSIEEDVTVEYGA 401
Query: 170 DMP----GSAFVPVRKIREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPMV 225
D+ GS F R E + WN+ + + S+L + +I G+ P +
Sbjct: 402 DIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWL 461
Query: 226 YIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLV 285
Y+ M+FS F WH EDH +S+NYLH G KTWYGVP AA EEV++ ++ P +
Sbjct: 462 YVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMK------KLTPEL 515
Query: 286 TFAT---LGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAAN 342
+ L + T+++P + GVP R Q AGEFV+TFPRAYH GF+ G+N EA N
Sbjct: 516 FDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVN 575
Query: 343 IATPEWLNIAKDAAIRRASINYPPMVSHFQLLYDLA 378
T +WL + + + SH +L+ +A
Sbjct: 576 FCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMA 611
Score = 98 (39.6 bits), Expect = 9.9e-41, Sum P(2) = 9.9e-41
Identities = 19/35 (54%), Positives = 23/35 (65%)
Query: 18 PVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P F P+ AEF+DP+ YI KI A + GICKI
Sbjct: 12 PECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKI 46
>WB|WBGene00004319 [details] [associations]
symbol:rbr-2 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0034648
"histone demethylase activity (H3-dimethyl-K4 specific)"
evidence=IDA] [GO:0034647 "histone demethylase activity
(H3-trimethyl-K4 specific)" evidence=IDA] [GO:0034720 "histone
H3-K4 demethylation" evidence=IMP;IDA] [GO:0040028 "regulation of
vulval development" evidence=IMP] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0008340 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0034648 GO:GO:0040028 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:Z69385 eggNOG:NOG327026
GeneTree:ENSGT00530000063118 GO:GO:0034647 KO:K11446 HSSP:Q14839
PIR:T27924 RefSeq:NP_502032.2 ProteinModelPortal:Q23541 SMR:Q23541
STRING:Q23541 PaxDb:Q23541 EnsemblMetazoa:ZK593.4 GeneID:177985
KEGG:cel:CELE_ZK593.4 UCSC:ZK593.4 CTD:177985 WormBase:ZK593.4
HOGENOM:HOG000113216 InParanoid:Q23541 OMA:KANQLLF NextBio:899238
Uniprot:Q23541
Length = 1477
Score = 371 (135.7 bits), Expect = 2.6e-40, Sum P(2) = 2.6e-40
Identities = 102/328 (31%), Positives = 157/328 (47%)
Query: 118 YTFQEFETKAKNFEKSYLKKCGNKKAA-LSALEIESLYWK--ASVDKPFSVEYANDM--- 171
Y F A ++ Y G K + +S +E +WK S + P SV+Y D+
Sbjct: 389 YNLNSFTEFANKWKCDYF---GVKDVSQVSCDAVERSFWKNVISHENPVSVKYGADLITS 445
Query: 172 -PGSAFVPVRKIREAVGEGVTVGET----PWNMRGVSRAKGSLLRFMKEEIPGVTSPMVY 226
GS F P RK + G + + + WN+ + + S+L I G+ P VY
Sbjct: 446 RVGSGF-P-RKEDKHTGPDLKLKQQYASHAWNLNNMPVLRESVLSHFNTGISGMMVPWVY 503
Query: 227 IAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVT 286
+ M FS F WH EDH +S+NY H G K WYGV E A FE+ ++ G
Sbjct: 504 VGMCFSTFCWHTEDHWTYSVNYNHFGERKIWYGVGGEDAEKFEDALKKIAPGLTGRQRDL 563
Query: 287 FATLGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATP 346
F + TT +P + GVP + QNAGEFV+TFPRAYH GF+ G N EA N A
Sbjct: 564 FHHM---TTAANPHLLRSLGVPIHSVHQNAGEFVITFPRAYHAGFNEGLNFAEAVNFAPI 620
Query: 347 EWLNIAKDAAIRRASINYPPMVSHFQLLYDLAIAMHS-SIPVAVSAKPRSSRLKDKNKDE 405
+WL+ ++ +++ + SH +LL+ + AM I ++++ R+ +K K
Sbjct: 621 DWLSKGRECVESYSNVRRYLVFSHDELLFKMVEAMDKLGISMSLATHEELIRIYEKQK-- 678
Query: 406 GETLVKELFVQDVAQNNELLHVLGQGSP 433
+++EL + N ++ V+ + P
Sbjct: 679 ---MLRELLARLGVSNRQMQQVMFEKIP 703
Score = 102 (41.0 bits), Expect = 2.6e-40, Sum P(2) = 2.6e-40
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 18 PVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P+AP ++PT EF DPI Y+ KI EA ++G+ KI
Sbjct: 54 PMAPIYYPTEEEFSDPIEYVAKIRHEAEKFGVVKI 88
>UNIPROTKB|Q23541 [details] [associations]
symbol:rbr-2 "Lysine-specific demethylase rbr-2"
species:6239 "Caenorhabditis elegans" [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=IDA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005634 GO:GO:0008340
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 GO:GO:0040028
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:Z69385
eggNOG:NOG327026 GeneTree:ENSGT00530000063118 GO:GO:0034647
KO:K11446 HSSP:Q14839 PIR:T27924 RefSeq:NP_502032.2
ProteinModelPortal:Q23541 SMR:Q23541 STRING:Q23541 PaxDb:Q23541
EnsemblMetazoa:ZK593.4 GeneID:177985 KEGG:cel:CELE_ZK593.4
UCSC:ZK593.4 CTD:177985 WormBase:ZK593.4 HOGENOM:HOG000113216
InParanoid:Q23541 OMA:KANQLLF NextBio:899238 Uniprot:Q23541
Length = 1477
Score = 371 (135.7 bits), Expect = 2.6e-40, Sum P(2) = 2.6e-40
Identities = 102/328 (31%), Positives = 157/328 (47%)
Query: 118 YTFQEFETKAKNFEKSYLKKCGNKKAA-LSALEIESLYWK--ASVDKPFSVEYANDM--- 171
Y F A ++ Y G K + +S +E +WK S + P SV+Y D+
Sbjct: 389 YNLNSFTEFANKWKCDYF---GVKDVSQVSCDAVERSFWKNVISHENPVSVKYGADLITS 445
Query: 172 -PGSAFVPVRKIREAVGEGVTVGET----PWNMRGVSRAKGSLLRFMKEEIPGVTSPMVY 226
GS F P RK + G + + + WN+ + + S+L I G+ P VY
Sbjct: 446 RVGSGF-P-RKEDKHTGPDLKLKQQYASHAWNLNNMPVLRESVLSHFNTGISGMMVPWVY 503
Query: 227 IAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVT 286
+ M FS F WH EDH +S+NY H G K WYGV E A FE+ ++ G
Sbjct: 504 VGMCFSTFCWHTEDHWTYSVNYNHFGERKIWYGVGGEDAEKFEDALKKIAPGLTGRQRDL 563
Query: 287 FATLGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATP 346
F + TT +P + GVP + QNAGEFV+TFPRAYH GF+ G N EA N A
Sbjct: 564 FHHM---TTAANPHLLRSLGVPIHSVHQNAGEFVITFPRAYHAGFNEGLNFAEAVNFAPI 620
Query: 347 EWLNIAKDAAIRRASINYPPMVSHFQLLYDLAIAMHS-SIPVAVSAKPRSSRLKDKNKDE 405
+WL+ ++ +++ + SH +LL+ + AM I ++++ R+ +K K
Sbjct: 621 DWLSKGRECVESYSNVRRYLVFSHDELLFKMVEAMDKLGISMSLATHEELIRIYEKQK-- 678
Query: 406 GETLVKELFVQDVAQNNELLHVLGQGSP 433
+++EL + N ++ V+ + P
Sbjct: 679 ---MLRELLARLGVSNRQMQQVMFEKIP 703
Score = 102 (41.0 bits), Expect = 2.6e-40, Sum P(2) = 2.6e-40
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 18 PVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P+AP ++PT EF DPI Y+ KI EA ++G+ KI
Sbjct: 54 PMAPIYYPTEEEFSDPIEYVAKIRHEAEKFGVVKI 88
>ZFIN|ZDB-GENE-030131-5379 [details] [associations]
symbol:kdm5ba "lysine (K)-specific demethylase
5Ba" species:7955 "Danio rerio" [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 ZFIN:ZDB-GENE-030131-5379 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:CR628365 IPI:IPI00636517
Ensembl:ENSDART00000058729 ArrayExpress:F1R3Y4 Bgee:F1R3Y4
Uniprot:F1R3Y4
Length = 1483
Score = 385 (140.6 bits), Expect = 8.5e-40, Sum P(2) = 8.5e-40
Identities = 105/328 (32%), Positives = 161/328 (49%)
Query: 113 QSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALE-IESLYWK--ASVDKPFSVEYAN 169
Q+ YT + F A +F+ Y N + E +E +W+ +++++ +VEY
Sbjct: 340 QAPRDYTLRTFGDMADSFKSDYF----NMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGA 395
Query: 170 DMP----GSAFVPVRKIREAVG---EG-VTVGETPWNMRGVSRAKGSLLRFMKEEIPGVT 221
D+ GS F PV+ V EG +T G WN+ + + S+L + +I G+
Sbjct: 396 DIASKDFGSGF-PVKNGTFKVSPEEEGYLTSG---WNLNNMPVLEASVLTHVTADICGMK 451
Query: 222 SPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEI 281
P +Y+ M FS F WH EDH +S+NYLH G KTWYG P AA E+V++ G E+
Sbjct: 452 LPWLYVGMCFSSFCWHIEDHWSYSVNYLHWGEPKTWYGAPGYAAEQLEDVMK--GLAPEL 509
Query: 282 NPLVTFATLGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAA 341
L + T+++P + + GVP R Q AGEFV+TFPRAYH GF+ GFN EA
Sbjct: 510 FESQP-DLLHQLVTIMNPNLLMEHGVPIYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAV 568
Query: 342 NIATPEWLNIAKDAAIRRASINYPPMVSHFQLLYDLAIAMHSSIPVAVSAKPRSSRLK-- 399
N T +WL + + V H++ LY + H + ++AK S L+
Sbjct: 569 NFCTADWLPLGRQC------------VEHYRSLYRYCVFSHDEMACNIAAKADSLELELA 616
Query: 400 -DKNKDEGETLVKELFVQDVAQNNELLH 426
KD + +E +++ A + H
Sbjct: 617 CAVQKDMNAMIQEEKILREKAYKLGMWH 644
Score = 83 (34.3 bits), Expect = 8.5e-40, Sum P(2) = 8.5e-40
Identities = 17/35 (48%), Positives = 19/35 (54%)
Query: 18 PVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P F P+ EF DP +I KI A GICKI
Sbjct: 6 PECPVFEPSWEEFADPFGFINKIRPIAENTGICKI 40
>UNIPROTKB|Q5F3R2 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0034721 "histone H3-K4 demethylation,
trimethyl-H3-K4-specific" evidence=ISS] [GO:0034720 "histone H3-K4
demethylation" evidence=ISS] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=ISS] [GO:0034648
"histone demethylase activity (H3-dimethyl-K4 specific)"
evidence=ISS] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GO:GO:0034647 KO:K11446 HOGENOM:HOG000290719 EMBL:AJ851588
IPI:IPI00578699 RefSeq:NP_001026200.1 UniGene:Gga.7752 HSSP:Q14839
ProteinModelPortal:Q5F3R2 SMR:Q5F3R2 GeneID:421168 KEGG:gga:421168
CTD:10765 InParanoid:Q5F3R2 OrthoDB:EOG4HT8RC NextBio:20823981
Uniprot:Q5F3R2
Length = 1522
Score = 371 (135.7 bits), Expect = 2.5e-39, Sum P(2) = 2.5e-39
Identities = 93/277 (33%), Positives = 141/277 (50%)
Query: 113 QSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALE-IESLYWK--ASVDKPFSVEYAN 169
Q+ YT + F A F+ Y N + E +E +W+ +++++ +VEY
Sbjct: 347 QAARDYTLRTFGEMADAFKSDYF----NMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGA 402
Query: 170 DMP----GSAFVPVR----KIREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVT 221
D+ GS F PVR K+R E + G WN+ + + S+L + +I G+
Sbjct: 403 DIASKEFGSGF-PVRDGKFKVRPEEEEYLDSG---WNLNNMPVMEQSVLAHITADICGMK 458
Query: 222 SPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEI 281
P +Y+ M FS F WH EDH +S+NYLH G KTWYG P AA E+V++ E+
Sbjct: 459 LPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGYAAEQLEDVMKK--LAPEL 516
Query: 282 NPLVTFATLGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAA 341
L + T+++P + GVP R Q AGEFV+TFPRAYH GF+ GFN EA
Sbjct: 517 FESQP-DLLHQLVTIMNPNTLMAHGVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAV 575
Query: 342 NIATPEWLNIAKDAAIRRASINYPPMVSHFQLLYDLA 378
N T +WL + + ++ + SH +++ +A
Sbjct: 576 NFCTVDWLPLGRQCIEHYRLLSRYCVFSHDEMICKMA 612
Score = 93 (37.8 bits), Expect = 2.5e-39, Sum P(2) = 2.5e-39
Identities = 18/35 (51%), Positives = 21/35 (60%)
Query: 18 PVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P F P+ EF DP A+I KI A Q GICK+
Sbjct: 8 PECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKV 42
>ZFIN|ZDB-GENE-030424-1 [details] [associations]
symbol:kdm5bb "lysine (K)-specific demethylase 5Bb"
species:7955 "Danio rerio" [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=ISS] [GO:0034720 "histone H3-K4
demethylation" evidence=ISS] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=ISS] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 ZFIN:ZDB-GENE-030424-1 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:CABZ01042196 EMBL:BX664742
Ensembl:ENSDART00000005583 Bgee:G1K2I1 Uniprot:G1K2I1
Length = 1522
Score = 374 (136.7 bits), Expect = 3.2e-39, Sum P(2) = 3.2e-39
Identities = 95/311 (30%), Positives = 153/311 (49%)
Query: 113 QSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALE-IESLYWK--ASVDKPFSVEYAN 169
Q+ YT + F A +F+ Y N + E +E +W+ ++ + +VEY
Sbjct: 377 QAHRDYTLKAFGEMADSFKSDYF----NMPVHMVPTELVEKEFWRLVGTIQEDVTVEYGA 432
Query: 170 DMP----GSAFVPVRKIREAVG-EGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPM 224
D+ GS F P++ R + + WN+ ++ S+L + +I G+T P
Sbjct: 433 DIASKEFGSGF-PIKGGRFKIAPHDEKYLQCGWNLNNMAMMTPSVLTHVTADICGMTLPW 491
Query: 225 VYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPL 284
+Y+ M FS F WH EDH +S+NYLH G KTWYG P AA E V++ E+
Sbjct: 492 LYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGFAAEQLEAVMKK--LAPELFDS 549
Query: 285 VTFATLGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIA 344
L + T+++P + GVP R Q AGEFV+TFPR+YH GF+ GFN EA N
Sbjct: 550 QP-DLLHQLVTIMNPNTLMAHGVPIYRTNQCAGEFVITFPRSYHSGFNQGFNFAEAVNFC 608
Query: 345 TPEWLNIAKDAAIRRASINYPPMVSHFQLLYDLAIAMHSSIPVAVSAKPRSSRLKDKNKD 404
T +W+ + + ++ + SH +++ ++A+ V SA + +L K +
Sbjct: 609 TVDWMPLGRQCVDHYRQLHRYCVFSHDEMVCNMAMKADCLDVVLASAVQKDMQLMIKEER 668
Query: 405 EGETLVKELFV 415
E V+++ V
Sbjct: 669 ELREKVRKMGV 679
Score = 89 (36.4 bits), Expect = 3.2e-39, Sum P(2) = 3.2e-39
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 18 PVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P F P+ EF+DP A+I KI A + GICK+
Sbjct: 13 PECPVFEPSWEEFKDPFAFINKIRPIAEKTGICKV 47
>CGD|CAL0000662 [details] [associations]
symbol:orf19.5651 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 CGD:CAL0000662
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR019786 PROSITE:PS01359
EMBL:AACQ01000129 EMBL:AACQ01000128 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 eggNOG:NOG327026 RefSeq:XP_713332.1
RefSeq:XP_713379.1 ProteinModelPortal:Q59UR9 STRING:Q59UR9
GeneID:3644970 GeneID:3645037 KEGG:cal:CaO19.13096
KEGG:cal:CaO19.5651 Uniprot:Q59UR9
Length = 723
Score = 381 (139.2 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 93/289 (32%), Positives = 141/289 (48%)
Query: 118 YTFQEFETKAKNFEKSYLKKCGNKKAALSALEIESLYWK-ASVDKP-FSVEYANDM---- 171
YT EF ++F+ +++ N+ LS +IE +W +K V+Y D+
Sbjct: 241 YTIPEFYKMCQDFDAKFIRDY-NQNNPLSVDDIERKFWSFVDAEKSDLEVKYGADIHNLR 299
Query: 172 PG--SAFVPVRKIREAVGEGVTVG---ETPWNMRGVSRAKGSLLRFMKEEIPGVTSPMVY 226
PG S F P+ + PWN+ + + GSLL F+ I G+T P +Y
Sbjct: 300 PGEVSGF-PMADTPSLDTTDPAIQYYINHPWNLNKLPFSNGSLLNFINTSISGMTIPWIY 358
Query: 227 IAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVT 286
I L S F WH EDH S NY H GA+K WYG+P A+ FE+++R ++
Sbjct: 359 IGSLLSTFCWHVEDHYTLSANYCHFGATKKWYGIPSSFADKFEKLMR--DSAPDLFKRQP 416
Query: 287 FATLGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATP 346
L + T++SP V G+PC QN+ EFV+T+P YH GF+ GFN EA N A
Sbjct: 417 -DLLHQLVTLMSPSKLVEHGIPCVYADQNSNEFVITYPLVYHAGFNCGFNFNEAVNFAID 475
Query: 347 EWLNIAKDAAIRRASINYPPMVSHFQLLYDLAIAMHSSIPVAVSAKPRS 395
EWL + + I + +H++LL ++ ++ V++ RS
Sbjct: 476 EWLEFGEKSVNDYRPIKKENVFNHYELLENILSRFNAKHDVSLDLVKRS 524
Score = 68 (29.0 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 15 KTLPVAPEFHPTLAEFQDPIAYIF--KIEKEASQYGICKI 52
+ L P PT EF DP+ Y+ K+ K + YG+ KI
Sbjct: 6 RLLTPCPVLTPTDQEFNDPVGYLSSDKVSKLGATYGLVKI 45
>UNIPROTKB|Q9UGL1 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0034647 "histone demethylase activity (H3-trimethyl-K4
specific)" evidence=IDA] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=IDA] [GO:0034720 "histone H3-K4
demethylation" evidence=IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0005634
"nucleus" evidence=TAS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0034721 "histone
H3-K4 demethylation, trimethyl-H3-K4-specific" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GO:GO:0034647 KO:K11446
HOGENOM:HOG000290719 HSSP:Q14839 CTD:10765 OrthoDB:EOG4HT8RC
EMBL:AJ132440 EMBL:AF087481 EMBL:AJ243706 EMBL:AC098934
EMBL:AC104463 IPI:IPI00847436 IPI:IPI00873956 RefSeq:NP_006609.3
UniGene:Hs.443650 ProteinModelPortal:Q9UGL1 SMR:Q9UGL1
DIP:DIP-53652N IntAct:Q9UGL1 STRING:Q9UGL1 PhosphoSite:Q9UGL1
DMDM:296439317 PaxDb:Q9UGL1 PRIDE:Q9UGL1 Ensembl:ENST00000367264
Ensembl:ENST00000367265 GeneID:10765 KEGG:hsa:10765 UCSC:uc001gyf.3
UCSC:uc009xag.3 GeneCards:GC01M202696 H-InvDB:HIX0001478
HGNC:HGNC:18039 HPA:HPA027179 MIM:605393 neXtProt:NX_Q9UGL1
PharmGKB:PA164721626 InParanoid:Q9UGL1 OMA:CENEKEM ChiTaRS:KDM5B
GenomeRNAi:10765 NextBio:40877 ArrayExpress:Q9UGL1 Bgee:Q9UGL1
CleanEx:HS_JARID1B Genevestigator:Q9UGL1 Uniprot:Q9UGL1
Length = 1544
Score = 369 (135.0 bits), Expect = 4.2e-39, Sum P(2) = 4.2e-39
Identities = 106/325 (32%), Positives = 167/325 (51%)
Query: 113 QSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALE-IESLYWK--ASVDKPFSVEYAN 169
Q+ YT + F A F+ Y N + E +E +W+ +++++ +VEY
Sbjct: 372 QAARDYTLRTFGEMADAFKSDYF----NMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGA 427
Query: 170 DMP----GSAFVPVR--KIREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSP 223
D+ GS F PVR KI+ + E + ++ WN+ + + S+L + +I G+ P
Sbjct: 428 DIASKEFGSGF-PVRDGKIKLSPEEEEYL-DSGWNLNNMPVMEQSVLAHITADICGMKLP 485
Query: 224 MVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINP 283
+Y+ M FS F WH EDH +S+NYLH G KTWYGVP AA E V++ E+
Sbjct: 486 WLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLENVMKK--LAPEL-- 541
Query: 284 LVTFATL-GEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAAN 342
V+ L + T+++P + VP R Q AGEFV+TFPRAYH GF+ GFN EA N
Sbjct: 542 FVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVN 601
Query: 343 IATPEWLNIAKDAAIRRASINYPPMVSHFQLLYDLAI-AMHSSIPVAVSAKPRSSRLKDK 401
T +WL + + ++ + SH +++ +A A + VA + + + + +
Sbjct: 602 FCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQKDMAIMIED 661
Query: 402 NKDEGETLVKELFVQDVAQNN-ELL 425
K ET V++L V D + + ELL
Sbjct: 662 EKALRET-VRKLGVIDSERMDFELL 685
Score = 93 (37.8 bits), Expect = 4.2e-39, Sum P(2) = 4.2e-39
Identities = 18/35 (51%), Positives = 21/35 (60%)
Query: 18 PVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P F P+ EF DP A+I KI A Q GICK+
Sbjct: 30 PECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKV 64
>MGI|MGI:1922855 [details] [associations]
symbol:Kdm5b "lysine (K)-specific demethylase 5B"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=ISO] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=IDA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=ISO] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=ISO] [GO:0034720 "histone H3-K4
demethylation" evidence=ISO;IDA] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 MGI:MGI:1922855 GO:GO:0003714 GO:GO:0045892
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GeneTree:ENSGT00530000063118
GO:GO:0034647 KO:K11446 HOGENOM:HOG000290719 CTD:10765
OrthoDB:EOG4HT8RC OMA:CENEKEM EMBL:AY082429 EMBL:AY082430
EMBL:AK220451 EMBL:BC048180 EMBL:BC057318 EMBL:AK041304
IPI:IPI00330824 IPI:IPI00776332 RefSeq:NP_690855.2 UniGene:Mm.28995
UniGene:Mm.391994 PDB:2EQY PDBsum:2EQY ProteinModelPortal:Q80Y84
SMR:Q80Y84 IntAct:Q80Y84 STRING:Q80Y84 PhosphoSite:Q80Y84
PRIDE:Q80Y84 Ensembl:ENSMUST00000047714 Ensembl:ENSMUST00000112198
GeneID:75605 KEGG:mmu:75605 UCSC:uc007csg.2 UCSC:uc011wsg.1
InParanoid:Q80Y84 EvolutionaryTrace:Q80Y84 NextBio:343484
Bgee:Q80Y84 Genevestigator:Q80Y84 Uniprot:Q80Y84
Length = 1544
Score = 369 (135.0 bits), Expect = 4.2e-39, Sum P(2) = 4.2e-39
Identities = 106/325 (32%), Positives = 167/325 (51%)
Query: 113 QSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALE-IESLYWK--ASVDKPFSVEYAN 169
Q+ YT + F A F+ Y N + E +E +W+ +++++ +VEY
Sbjct: 372 QAARDYTLRTFGEMADAFKSDYF----NMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGA 427
Query: 170 DMP----GSAFVPVR--KIREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSP 223
D+ GS F PVR KI+ + E + ++ WN+ + + S+L + +I G+ P
Sbjct: 428 DIASKEFGSGF-PVRDGKIKISPEEEEYL-DSGWNLNNMPVMEQSVLAHITADICGMKLP 485
Query: 224 MVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINP 283
+Y+ M FS F WH EDH +S+NYLH G KTWYGVP AA E V++ E+
Sbjct: 486 WLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLENVMKK--LAPEL-- 541
Query: 284 LVTFATL-GEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAAN 342
V+ L + T+++P + VP R Q AGEFV+TFPRAYH GF+ GFN EA N
Sbjct: 542 FVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVN 601
Query: 343 IATPEWLNIAKDAAIRRASINYPPMVSHFQLLYDLAI-AMHSSIPVAVSAKPRSSRLKDK 401
T +WL + + ++ + SH +++ +A A + VA + + + + +
Sbjct: 602 FCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQKDMAIMIED 661
Query: 402 NKDEGETLVKELFVQDVAQNN-ELL 425
K ET V++L V D + + ELL
Sbjct: 662 EKALRET-VRKLGVIDSERMDFELL 685
Score = 93 (37.8 bits), Expect = 4.2e-39, Sum P(2) = 4.2e-39
Identities = 18/35 (51%), Positives = 21/35 (60%)
Query: 18 PVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P F P+ EF DP A+I KI A Q GICK+
Sbjct: 30 PECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKV 64
>RGD|1565602 [details] [associations]
symbol:Kdm5b "lysine (K)-specific demethylase 5B" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA;ISO] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=IEA;ISO] [GO:0034720 "histone
H3-K4 demethylation" evidence=ISO] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
RGD:1565602 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063118 GO:GO:0034647
OrthoDB:EOG4HT8RC IPI:IPI00554242 Ensembl:ENSRNOT00000006290
UCSC:RGD:1565602 Uniprot:D3ZUT4
Length = 1546
Score = 369 (135.0 bits), Expect = 4.3e-39, Sum P(2) = 4.3e-39
Identities = 106/325 (32%), Positives = 167/325 (51%)
Query: 113 QSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALE-IESLYWK--ASVDKPFSVEYAN 169
Q+ YT + F A F+ Y N + E +E +W+ +++++ +VEY
Sbjct: 374 QAARDYTLRTFGEMADAFKSDYF----NMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGA 429
Query: 170 DMP----GSAFVPVR--KIREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSP 223
D+ GS F PVR KI+ + E + ++ WN+ + + S+L + +I G+ P
Sbjct: 430 DIASKEFGSGF-PVRDGKIKISPEEEEYL-DSGWNLNNMPVMEQSVLAHITADICGMKLP 487
Query: 224 MVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINP 283
+Y+ M FS F WH EDH +S+NYLH G KTWYGVP AA E V++ E+
Sbjct: 488 WLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLENVMKK--LAPEL-- 543
Query: 284 LVTFATL-GEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAAN 342
V+ L + T+++P + VP R Q AGEFV+TFPRAYH GF+ GFN EA N
Sbjct: 544 FVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVN 603
Query: 343 IATPEWLNIAKDAAIRRASINYPPMVSHFQLLYDLAI-AMHSSIPVAVSAKPRSSRLKDK 401
T +WL + + ++ + SH +++ +A A + VA + + + + +
Sbjct: 604 FCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQKDMAIMIED 663
Query: 402 NKDEGETLVKELFVQDVAQNN-ELL 425
K ET V++L V D + + ELL
Sbjct: 664 EKALRET-VRKLGVIDSERMDFELL 687
Score = 93 (37.8 bits), Expect = 4.3e-39, Sum P(2) = 4.3e-39
Identities = 18/35 (51%), Positives = 21/35 (60%)
Query: 18 PVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P F P+ EF DP A+I KI A Q GICK+
Sbjct: 30 PECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKV 64
>UNIPROTKB|E7EV89 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS51184
SMART:SM00558 GO:GO:0005634 GO:GO:0005737 GO:GO:0016706
EMBL:AC005844 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:AC007406 HGNC:HGNC:9886 ChiTaRS:KDM5A
IPI:IPI00909864 ProteinModelPortal:E7EV89 SMR:E7EV89 PRIDE:E7EV89
Ensembl:ENST00000544760 ArrayExpress:E7EV89 Bgee:E7EV89
Uniprot:E7EV89
Length = 715
Score = 358 (131.1 bits), Expect = 2.6e-38, Sum P(2) = 2.6e-38
Identities = 75/185 (40%), Positives = 105/185 (56%)
Query: 197 WNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKT 256
WN+ + + S+L + +I G+ P +Y+ M FS F WH EDH +S+NYLH G KT
Sbjct: 62 WNLNNMPVLEQSVLAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKT 121
Query: 257 WYGVPMEAANAFEEVVRVHGYGEEINPLVTFAT---LGEKTTMISPEVFVGAGVPCCRLV 313
WYGVP AA EEV+R E+ P + + L + T+++P V + GVP R
Sbjct: 122 WYGVPSHAAEQLEEVMR------ELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTN 175
Query: 314 QNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAAIRRASINYPPMVSHFQL 373
Q AGEFVVTFPRAYH GF+ G+N EA N T +WL I + + + SH +L
Sbjct: 176 QCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEEL 235
Query: 374 LYDLA 378
++ +A
Sbjct: 236 IFKMA 240
Score = 84 (34.6 bits), Expect = 2.6e-38, Sum P(2) = 2.6e-38
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 18 PVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P F P+ EF DP+++I +I A + GICKI
Sbjct: 17 PECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKI 51
>UNIPROTKB|F1S4N3 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0034648 "histone demethylase
activity (H3-dimethyl-K4 specific)" evidence=IEA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0034647 OMA:CENEKEM
EMBL:CU986276 Ensembl:ENSSSCT00000011960 Uniprot:F1S4N3
Length = 1304
Score = 365 (133.5 bits), Expect = 4.7e-38, Sum P(2) = 4.7e-38
Identities = 105/325 (32%), Positives = 167/325 (51%)
Query: 113 QSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALE-IESLYWK--ASVDKPFSVEYAN 169
Q+ YT + F A F+ Y N + E +E +W+ +++++ +VEY
Sbjct: 371 QAARDYTLRTFGEMADAFKSDYF----NMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGA 426
Query: 170 DMP----GSAFVPVR--KIREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSP 223
D+ GS F PVR K++ + E + ++ WN+ + + S+L + +I G+ P
Sbjct: 427 DIASKEFGSGF-PVRDGKVKLSPEEEEYL-DSGWNLNNMPVMEQSVLAHITADICGMKLP 484
Query: 224 MVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINP 283
+Y+ M FS F WH EDH +S+NYLH G KTWYGVP AA E V++ E+
Sbjct: 485 WLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGFAAEQLEAVMK--RLAPEL-- 540
Query: 284 LVTFATL-GEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAAN 342
V+ L + T+++P + VP R Q AGEFV+TFPRAYH GF+ GFN EA N
Sbjct: 541 FVSQPDLLHQLVTIMNPNTLMTHQVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVN 600
Query: 343 IATPEWLNIAKDAAIRRASINYPPMVSHFQLLYDLAI-AMHSSIPVAVSAKPRSSRLKDK 401
T +WL + + ++ + SH +++ +A A + VA + + + + +
Sbjct: 601 FCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICRMASKADVLDVVVASTVQKDMAIMIED 660
Query: 402 NKDEGETLVKELFVQDVAQNN-ELL 425
K ET V++L V D + + ELL
Sbjct: 661 EKALRET-VRKLGVIDSERMDFELL 684
Score = 85 (35.0 bits), Expect = 4.7e-38, Sum P(2) = 4.7e-38
Identities = 18/35 (51%), Positives = 21/35 (60%)
Query: 18 PVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P F P+ EF DP A+I KI A Q GICK+
Sbjct: 30 PECPVFEPSW-EFADPFAFIHKIRPIAEQTGICKV 63
Score = 38 (18.4 bits), Expect = 4.0e-33, Sum P(2) = 4.0e-33
Identities = 7/22 (31%), Positives = 11/22 (50%)
Query: 99 FCPRKPRPVQKPVWQSGEYYTF 120
F P PV +P W+ + + F
Sbjct: 26 FLPPPECPVFEPSWEFADPFAF 47
>UNIPROTKB|F1NRC4 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 GeneTree:ENSGT00530000063118
GO:GO:0034647 IPI:IPI00578699 EMBL:AADN02063991 EMBL:AADN02063988
EMBL:AADN02063989 EMBL:AADN02063990 Ensembl:ENSGALT00000000582
ArrayExpress:F1NRC4 Uniprot:F1NRC4
Length = 1510
Score = 371 (135.7 bits), Expect = 1.0e-36, Sum P(2) = 1.0e-36
Identities = 93/277 (33%), Positives = 141/277 (50%)
Query: 113 QSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALE-IESLYWK--ASVDKPFSVEYAN 169
Q+ YT + F A F+ Y N + E +E +W+ +++++ +VEY
Sbjct: 335 QAARDYTLRTFGEMADAFKSDYF----NMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGA 390
Query: 170 DMP----GSAFVPVR----KIREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVT 221
D+ GS F PVR K+R E + G WN+ + + S+L + +I G+
Sbjct: 391 DIASKEFGSGF-PVRDGKFKVRPEEEEYLDSG---WNLNNMPVMEQSVLAHITADICGMK 446
Query: 222 SPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEI 281
P +Y+ M FS F WH EDH +S+NYLH G KTWYG P AA E+V++ E+
Sbjct: 447 LPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGYAAEQLEDVMKK--LAPEL 504
Query: 282 NPLVTFATLGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAA 341
L + T+++P + GVP R Q AGEFV+TFPRAYH GF+ GFN EA
Sbjct: 505 FESQP-DLLHQLVTIMNPNTLMAHGVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAV 563
Query: 342 NIATPEWLNIAKDAAIRRASINYPPMVSHFQLLYDLA 378
N T +WL + + ++ + SH +++ +A
Sbjct: 564 NFCTVDWLPLGRQCIEHYRLLSRYCVFSHDEMICKMA 600
Score = 68 (29.0 bits), Expect = 1.0e-36, Sum P(2) = 1.0e-36
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 23 FHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
F P+ EF DP A+I + A Q GICK+
Sbjct: 2 FEPSWEEFADPFAFIM-LRPIAEQTGICKV 30
>UNIPROTKB|F1NUR9 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 GeneTree:ENSGT00530000063118
GO:GO:0034647 OMA:CENEKEM EMBL:AADN02063991 EMBL:AADN02063988
EMBL:AADN02063989 EMBL:AADN02063990 IPI:IPI00823098
Ensembl:ENSGALT00000040834 ArrayExpress:F1NUR9 Uniprot:F1NUR9
Length = 1521
Score = 371 (135.7 bits), Expect = 1.0e-36, Sum P(2) = 1.0e-36
Identities = 93/277 (33%), Positives = 141/277 (50%)
Query: 113 QSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALE-IESLYWK--ASVDKPFSVEYAN 169
Q+ YT + F A F+ Y N + E +E +W+ +++++ +VEY
Sbjct: 346 QAARDYTLRTFGEMADAFKSDYF----NMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGA 401
Query: 170 DMP----GSAFVPVR----KIREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVT 221
D+ GS F PVR K+R E + G WN+ + + S+L + +I G+
Sbjct: 402 DIASKEFGSGF-PVRDGKFKVRPEEEEYLDSG---WNLNNMPVMEQSVLAHITADICGMK 457
Query: 222 SPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEI 281
P +Y+ M FS F WH EDH +S+NYLH G KTWYG P AA E+V++ E+
Sbjct: 458 LPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGYAAEQLEDVMKK--LAPEL 515
Query: 282 NPLVTFATLGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAA 341
L + T+++P + GVP R Q AGEFV+TFPRAYH GF+ GFN EA
Sbjct: 516 FESQP-DLLHQLVTIMNPNTLMAHGVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAV 574
Query: 342 NIATPEWLNIAKDAAIRRASINYPPMVSHFQLLYDLA 378
N T +WL + + ++ + SH +++ +A
Sbjct: 575 NFCTVDWLPLGRQCIEHYRLLSRYCVFSHDEMICKMA 611
Score = 68 (29.0 bits), Expect = 1.0e-36, Sum P(2) = 1.0e-36
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 23 FHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
F P+ EF DP A+I + A Q GICK+
Sbjct: 13 FEPSWEEFADPFAFIM-LRPIAEQTGICKV 41
>UNIPROTKB|I3L8V3 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0019907 "cyclin-dependent protein
kinase activating kinase holoenzyme complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 Pfam:PF02373 Pfam:PF02928
Pfam:PF08429 PROSITE:PS51184 SMART:SM00558 GO:GO:0005634
GO:GO:0016706 GeneTree:ENSGT00530000063118 EMBL:FP102715
Ensembl:ENSSSCT00000023353 Uniprot:I3L8V3
Length = 583
Score = 386 (140.9 bits), Expect = 1.6e-35, P = 1.6e-35
Identities = 89/239 (37%), Positives = 131/239 (54%)
Query: 150 IESLYWK--ASVDKPFSVEYANDMP----GSAFVPVRK-IREAVGEGVTVGETPWNMRGV 202
+E +W+ +S+++ VEY D+ GS F PV+ R+ + E + WN+ +
Sbjct: 7 VEKEFWRLVSSIEEDVIVEYGADISSKDFGSGF-PVKDGRRKMLPEEEEYALSGWNLNNM 65
Query: 203 SRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPM 262
+ S+L + +I G+ P +Y+ M FS F WH EDH +S+NYLH G KTWYGVP
Sbjct: 66 PVLEQSVLAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPS 125
Query: 263 EAANAFEEVVRVHGYGEEINPLVTFAT---LGEKTTMISPEVFVGAGVPCCRLVQNAGEF 319
AA EEV+R E+ P + + L + T+++P V + GVP R Q AGEF
Sbjct: 126 HAAEQLEEVMR------ELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEF 179
Query: 320 VVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAAIRRASINYPPMVSHFQLLYDLA 378
VVTFPRAYH GF+ G+N EA N T +WL I + + + SH +L++ +A
Sbjct: 180 VVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMA 238
>TAIR|locus:2031290 [details] [associations]
symbol:AT1G63490 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0016926 "protein desumoylation"
evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 Pfam:PF02373 Pfam:PF02928
Pfam:PF08429 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 GO:GO:0003700 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 eggNOG:NOG327026 KO:K11446
EMBL:AY039958 EMBL:BT011572 IPI:IPI00545053 RefSeq:NP_564814.1
UniGene:At.22811 ProteinModelPortal:Q94BQ7 SMR:Q94BQ7 PRIDE:Q94BQ7
EnsemblPlants:AT1G63490.1 GeneID:842655 KEGG:ath:AT1G63490
TAIR:At1g63490 HOGENOM:HOG000084215 InParanoid:Q94BQ7 OMA:WAGSEMD
PhylomeDB:Q94BQ7 ProtClustDB:CLSN2689007 ArrayExpress:Q94BQ7
Genevestigator:Q94BQ7 Uniprot:Q94BQ7
Length = 1116
Score = 391 (142.7 bits), Expect = 4.8e-35, P = 4.8e-35
Identities = 93/253 (36%), Positives = 132/253 (52%)
Query: 167 YANDMP----GSAFVPVRKIREAVGEGVTVGE---TPWNMRGVSRAKGSLLRFMKEEIPG 219
Y ND+ GS F + R E E +PWN+ + + KGS+L+ ++ I G
Sbjct: 2 YGNDLDTSVYGSGFPRIGDQRPESVEADIWDEYCGSPWNLNNMPKLKGSMLQAIRHNING 61
Query: 220 VTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGE 279
VT P +Y+ MLFS F WH EDH +S+NYLH G +K WYG+P AA+AFE+V+R
Sbjct: 62 VTVPWLYLGMLFSSFCWHFEDHCFYSVNYLHWGEAKCWYGIPGSAASAFEKVMRKTLPDL 121
Query: 280 -EINPLVTFATLGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCG 338
+ P + F + TM+SP V VP ++Q G FV+TFP+++H GF+ G NC
Sbjct: 122 FDAQPDLLF----QLVTMLSPTVLQENKVPVYTVLQEPGNFVITFPKSFHAGFNFGLNCA 177
Query: 339 EAANIATPEWLNIAKDAAIRRASINYPPMVSHFQLLYDLAIAMHSSIPVAVSAKPRSSRL 398
EA N AT +WL A P ++SH +LL +A + ++ K R+
Sbjct: 178 EAVNFATADWLPYGGSGAELYRLYRKPSVISHEELLCVVAKGNCCNNEGSIHLKKELLRI 237
Query: 399 KDKNKDEGETLVK 411
K K E L K
Sbjct: 238 YSKEKTWREQLWK 250
>UNIPROTKB|Q6B0I6 [details] [associations]
symbol:KDM4D "Lysine-specific demethylase 4D" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 EMBL:CH471065 GO:GO:0046872
GO:GO:0006351 GO:GO:0016568 GO:GO:0016702 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 PDB:4HON PDBsum:4HON eggNOG:NOG317950
OMA:FASKRWI HOGENOM:HOG000231125 KO:K06709 EMBL:AK001113
EMBL:AK056162 EMBL:AP002383 EMBL:BC074739 EMBL:BC119010
EMBL:BC122858 EMBL:AL137545 IPI:IPI00017991 PIR:T46388
RefSeq:NP_060509.2 UniGene:Hs.503598 PDB:3DXT PDB:3DXU PDB:4HOO
PDBsum:3DXT PDBsum:3DXU PDBsum:4HOO ProteinModelPortal:Q6B0I6
SMR:Q6B0I6 DIP:DIP-29606N IntAct:Q6B0I6 STRING:Q6B0I6
PhosphoSite:Q6B0I6 DMDM:239938885 PRIDE:Q6B0I6
Ensembl:ENST00000335080 Ensembl:ENST00000536741
Ensembl:ENST00000570915 Ensembl:ENST00000576429 GeneID:55693
KEGG:hsa:55693 UCSC:uc001pfe.3 CTD:55693 GeneCards:GC11P094706
HGNC:HGNC:25498 MIM:609766 neXtProt:NX_Q6B0I6 PharmGKB:PA164721552
InParanoid:Q6B0I6 OrthoDB:EOG4F7NJR PhylomeDB:Q6B0I6
ChEMBL:CHEMBL6138 EvolutionaryTrace:Q6B0I6 GenomeRNAi:55693
NextBio:60511 Bgee:Q6B0I6 CleanEx:HS_JMJD2D Genevestigator:Q6B0I6
GermOnline:ENSG00000186280 Uniprot:Q6B0I6
Length = 523
Score = 341 (125.1 bits), Expect = 7.7e-35, Sum P(2) = 7.7e-35
Identities = 70/160 (43%), Positives = 89/160 (55%)
Query: 197 WNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKT 256
WN+ + + L + I GV +P +Y M + FAWH ED DL+S+NYLH+G KT
Sbjct: 152 WNLGHLGTIQDLLEKECGVVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHLGEPKT 211
Query: 257 WYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRLVQNA 316
WY VP E E + R G A L K +ISP V G+P R+ Q A
Sbjct: 212 WYVVPPEHGQRLERLARELFPGSSRG---CGAFLRHKVALISPTVLKENGIPFNRITQEA 268
Query: 317 GEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAA 356
GEF+VTFP YH GF+HGFNC EA N ATP W++ K A+
Sbjct: 269 GEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGKMAS 308
Score = 57 (25.1 bits), Expect = 7.7e-35, Sum P(2) = 7.7e-35
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 23 FHPTLAEFQDPIAYIFKIEKE-ASQYGICKI 52
FHPT EF D YI +E + A + G+ KI
Sbjct: 21 FHPTKEEFNDFDKYIAYMESQGAHRAGLAKI 51
>MGI|MGI:3606484 [details] [associations]
symbol:Kdm4d "lysine (K)-specific demethylase 4D"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016702 "oxidoreductase activity,
acting on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=IEA] [GO:0033169
"histone H3-K9 demethylation" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 MGI:MGI:3606484 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0006351 GO:GO:0016568 GO:GO:0016702
EMBL:CT485607 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
GeneTree:ENSGT00530000063342 eggNOG:NOG317950 OMA:FASKRWI
HOGENOM:HOG000231125 KO:K06709 CTD:55693 OrthoDB:EOG4F7NJR
EMBL:AK030020 EMBL:AK155227 EMBL:BC112372 IPI:IPI00651810
RefSeq:NP_775609.2 UniGene:Mm.240457 ProteinModelPortal:Q3U2K5
SMR:Q3U2K5 PhosphoSite:Q3U2K5 PRIDE:Q3U2K5 DNASU:244694
Ensembl:ENSMUST00000058796 Ensembl:ENSMUST00000115647 GeneID:244694
KEGG:mmu:244694 UCSC:uc009oen.1 InParanoid:A2CGB5 NextBio:386391
Bgee:Q3U2K5 CleanEx:MM_JMJD2D Genevestigator:Q3U2K5 Uniprot:Q3U2K5
Length = 510
Score = 341 (125.1 bits), Expect = 4.2e-34, Sum P(2) = 4.2e-34
Identities = 72/165 (43%), Positives = 91/165 (55%)
Query: 193 GETP-WNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHM 251
G+T WN+ + + L + I GV +P +Y M + FAWH ED DL+S+NYLH
Sbjct: 144 GKTQQWNVGHLGTIQDLLEQECGIVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHF 203
Query: 252 GASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCR 311
G KTWY VP E E + R G A L K +ISP V G+P R
Sbjct: 204 GQPKTWYAVPPEHGRRLERLARELFPGSSQG---CQAFLRHKVALISPTVLKENGIPFGR 260
Query: 312 LVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAA 356
+ Q AGEF+VTFP YH GF+HGFNC EA N ATP W++ K A+
Sbjct: 261 ITQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGKVAS 305
Score = 48 (22.0 bits), Expect = 4.2e-34, Sum P(2) = 4.2e-34
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 23 FHPTLAEFQDPIAYIFKIEKE-ASQYGICKI 52
F PT EF D YI +E + A + G+ K+
Sbjct: 18 FRPTKEEFNDFDKYIAYMESQGAHRAGLAKV 48
>UNIPROTKB|B2RXH2 [details] [associations]
symbol:KDM4E "Lysine-specific demethylase 4E" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0016568 GO:GO:0016702 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 eggNOG:NOG317950 HOGENOM:HOG000231125 EMBL:AP002383
EMBL:BC157851 EMBL:BC157889 EMBL:BC171916 IPI:IPI00887640
RefSeq:NP_001155102.1 UniGene:Hs.714692 PDB:2W2I PDBsum:2W2I
ProteinModelPortal:B2RXH2 SMR:B2RXH2 PRIDE:B2RXH2
Ensembl:ENST00000450979 Ensembl:ENST00000576054 GeneID:390245
KEGG:hsa:390245 UCSC:uc010ruf.1 CTD:390245 GeneCards:GC11P094759
HGNC:HGNC:37098 neXtProt:NX_B2RXH2 PharmGKB:PA165543440 OMA:PESYELW
OrthoDB:EOG45491F BindingDB:B2RXH2 ChEMBL:CHEMBL1293226
EvolutionaryTrace:B2RXH2 GenomeRNAi:390245 NextBio:103576
Uniprot:B2RXH2
Length = 506
Score = 333 (122.3 bits), Expect = 4.3e-34, Sum P(2) = 4.3e-34
Identities = 72/167 (43%), Positives = 96/167 (57%)
Query: 197 WNMRGVSRAKGSLLRFMKEE----IPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMG 252
WN+ + G++L +++E I GV +P +Y M + FAWH ED DL+S+NYLH G
Sbjct: 149 WNLGHL----GTILDLLEQECGVVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFG 204
Query: 253 ASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTF---ATLGEKTTMISPEVFVGAGVPC 309
KTWY VP E E + R E+ P ++ A L K +ISP V G+P
Sbjct: 205 EPKTWYVVPPEHGQHLERLAR------ELFPDISRGCEAFLRHKVALISPTVLKENGIPF 258
Query: 310 CRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAA 356
+ Q AGEF+VTFP YH GF+HGFNC EA N ATP W++ K A+
Sbjct: 259 NCMTQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGKMAS 305
Score = 177 (67.4 bits), Expect = 6.5e-12, Sum P(2) = 6.5e-12
Identities = 52/174 (29%), Positives = 76/174 (43%)
Query: 107 VQKPVWQ--SGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSA-----LEIESLYWKASV 159
+ P+ Q SG+ F ++ K K ++ N K + ++E YWK+
Sbjct: 68 IATPLQQVTSGQGGVFTQYHKKKKAMRVGQYRRLANSKKYQTPPHQNFADLEQRYWKSHP 127
Query: 160 DKPFSVEYANDMPGSAFVPVRKIREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPG 219
P + Y D+ GS F E+ + WN+ + L + I G
Sbjct: 128 GNP-PI-YGADISGSLF------EESTKQ--------WNLGHLGTILDLLEQECGVVIEG 171
Query: 220 VTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVR 273
V +P +Y M + FAWH ED DL+S+NYLH G KTWY VP E E + R
Sbjct: 172 VNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKTWYVVPPEHGQHLERLAR 225
Score = 57 (25.1 bits), Expect = 4.3e-34, Sum P(2) = 4.3e-34
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 23 FHPTLAEFQDPIAYIFKIEKE-ASQYGICKI 52
F+PT+ EF D Y+ +E + A Q G+ K+
Sbjct: 18 FYPTMEEFADFNTYVAYMESQGAHQAGLAKV 48
>RGD|1591045 [details] [associations]
symbol:Kdm4d "lysine (K)-specific demethylase 4D" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0033169 "histone H3-K9 demethylation"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00558
RGD:1591045 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
GO:GO:0016568 GO:GO:0016702 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 GeneTree:ENSGT00530000063342 eggNOG:NOG317950
HOGENOM:HOG000231125 KO:K06709 CTD:55693 OrthoDB:EOG4F7NJR
EMBL:BC128760 IPI:IPI00767164 RefSeq:NP_001073180.1
RefSeq:XP_003750480.1 RefSeq:XP_003750481.1 UniGene:Rn.202733
ProteinModelPortal:A1A5Q5 SMR:A1A5Q5 PRIDE:A1A5Q5
Ensembl:ENSRNOT00000033932 GeneID:100909834 GeneID:689582
KEGG:rno:100909834 KEGG:rno:689582 UCSC:RGD:1591045 NextBio:738978
Genevestigator:A1A5Q5 Uniprot:A1A5Q5
Length = 510
Score = 334 (122.6 bits), Expect = 3.3e-33, Sum P(2) = 3.3e-33
Identities = 71/165 (43%), Positives = 91/165 (55%)
Query: 193 GETP-WNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHM 251
G+T WN+ + + L + I GV +P +Y M + FAWH ED DL+S+NYLH
Sbjct: 144 GKTQQWNVGHLGTIQDLLEQECGIVIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHF 203
Query: 252 GASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCR 311
G KTWY VP E E + + G A L K +ISP V G+P R
Sbjct: 204 GQPKTWYAVPPEHGRRLELLAKELFPGSSQG---CQAFLRHKVALISPTVLKENGIPFGR 260
Query: 312 LVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAA 356
+ Q AGEF+VTFP YH GF+HGFNC EA N ATP W++ K A+
Sbjct: 261 ITQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGKVAS 305
Score = 48 (22.0 bits), Expect = 3.3e-33, Sum P(2) = 3.3e-33
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 23 FHPTLAEFQDPIAYIFKIEKE-ASQYGICKI 52
F PT EF D YI +E + A + G+ K+
Sbjct: 18 FRPTKEEFNDFDKYIAYMESQGAHRAGLAKV 48
>UNIPROTKB|B3KV94 [details] [associations]
symbol:JARID1B "cDNA FLJ16281 fis, clone NT2RI3003104,
highly similar to Homo sapiens Jumonji, AT rich interactive domain
1B (RBP2-like) (JARID1B), mRNA" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 EMBL:CH471067 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0032453
HOGENOM:HOG000290719 EMBL:AC098934 EMBL:AC104463 UniGene:Hs.443650
HGNC:HGNC:18039 ChiTaRS:KDM5B HOVERGEN:HBG068574 EMBL:AK122752
IPI:IPI00877939 SMR:B3KV94 STRING:B3KV94 Ensembl:ENST00000235790
Uniprot:B3KV94
Length = 1275
Score = 369 (135.0 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 106/325 (32%), Positives = 167/325 (51%)
Query: 113 QSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALE-IESLYWK--ASVDKPFSVEYAN 169
Q+ YT + F A F+ Y N + E +E +W+ +++++ +VEY
Sbjct: 214 QAARDYTLRTFGEMADAFKSDYF----NMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGA 269
Query: 170 DMP----GSAFVPVR--KIREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSP 223
D+ GS F PVR KI+ + E + ++ WN+ + + S+L + +I G+ P
Sbjct: 270 DIASKEFGSGF-PVRDGKIKLSPEEEEYL-DSGWNLNNMPVMEQSVLAHITADICGMKLP 327
Query: 224 MVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINP 283
+Y+ M FS F WH EDH +S+NYLH G KTWYGVP AA E V++ E+
Sbjct: 328 WLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLENVMKK--LAPEL-- 383
Query: 284 LVTFATL-GEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAAN 342
V+ L + T+++P + VP R Q AGEFV+TFPRAYH GF+ GFN EA N
Sbjct: 384 FVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVN 443
Query: 343 IATPEWLNIAKDAAIRRASINYPPMVSHFQLLYDLAI-AMHSSIPVAVSAKPRSSRLKDK 401
T +WL + + ++ + SH +++ +A A + VA + + + + +
Sbjct: 444 FCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQKDMAIMIED 503
Query: 402 NKDEGETLVKELFVQDVAQNN-ELL 425
K ET V++L V D + + ELL
Sbjct: 504 EKALRET-VRKLGVIDSERMDFELL 527
>ZFIN|ZDB-GENE-030131-6279 [details] [associations]
symbol:kdm4ab "lysine (K)-specific demethylase 4A,
genome duplicate b" species:7955 "Danio rerio" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 ZFIN:ZDB-GENE-030131-6279 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 eggNOG:COG5141
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
HOGENOM:HOG000231125 OrthoDB:EOG4QRH37 HOVERGEN:HBG080483
IPI:IPI00489014 EMBL:BC047193 UniGene:Dr.24248
ProteinModelPortal:Q802U7 STRING:Q802U7 ArrayExpress:Q802U7
Uniprot:Q802U7
Length = 895
Score = 335 (123.0 bits), Expect = 1.7e-32, Sum P(2) = 1.7e-32
Identities = 81/213 (38%), Positives = 112/213 (52%)
Query: 217 IPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHG 276
I GV +P +Y M + FAWH ED DL+S+NYLH G K+WY VP E E + +
Sbjct: 165 IEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYTVPPEHGKRLERLAKGFF 224
Query: 277 YGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFN 336
G N A L K T+ISP + G+P ++ Q AGEF+VTFP YH GF+HGFN
Sbjct: 225 PGSSQN---CEAFLRHKMTLISPSILKKYGIPFEKITQEAGEFMVTFPYGYHAGFNHGFN 281
Query: 337 CGEAANIATPEWLNIAKDAAI---RR--ASINYPPMVSHFQL-LYDLAIAMHSSIPVAVS 390
C E+ N AT W++ K A + R+ I+ V FQ Y+L + + P+ S
Sbjct: 282 CAESTNFATRRWIDYGKQAILCSCRKDMVKISMDVFVKKFQPERYELWLEGKDNAPIDHS 341
Query: 391 AKPRSSRLKDKNKDEGETLVKELFVQDVAQNNE 423
KP + GE +EL +++ Q+NE
Sbjct: 342 -KPTPEAAEFLG---GEAGAQELRIEN--QSNE 368
Score = 57 (25.1 bits), Expect = 1.7e-32, Sum P(2) = 1.7e-32
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 23 FHPTLAEFQDPIAYIFKIEKE-ASQYGICKI 52
FHPT+ EF++ YI +E + A + G+ KI
Sbjct: 14 FHPTVEEFKNFSRYIAYMESQGAHKAGLAKI 44
>ZFIN|ZDB-GENE-070705-160 [details] [associations]
symbol:si:ch211-262l3.1 "si:ch211-262l3.1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 ZFIN:ZDB-GENE-070705-160 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 EMBL:BX640408 EMBL:CABZ01059930
EMBL:CABZ01059931 IPI:IPI00489014 Ensembl:ENSDART00000024302
OMA:VKEWNIC ArrayExpress:F1QNG0 Bgee:F1QNG0 Uniprot:F1QNG0
Length = 895
Score = 335 (123.0 bits), Expect = 1.7e-32, Sum P(2) = 1.7e-32
Identities = 81/213 (38%), Positives = 112/213 (52%)
Query: 217 IPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHG 276
I GV +P +Y M + FAWH ED DL+S+NYLH G K+WY VP E E + +
Sbjct: 165 IEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYTVPPEHGKRLERLAKGFF 224
Query: 277 YGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFN 336
G N A L K T+ISP + G+P ++ Q AGEF+VTFP YH GF+HGFN
Sbjct: 225 PGSSQN---CEAFLRHKMTLISPSILKKYGIPFEKITQEAGEFMVTFPYGYHAGFNHGFN 281
Query: 337 CGEAANIATPEWLNIAKDAAI---RR--ASINYPPMVSHFQL-LYDLAIAMHSSIPVAVS 390
C E+ N AT W++ K A + R+ I+ V FQ Y+L + + P+ S
Sbjct: 282 CAESTNFATRRWIDYGKQAILCSCRKDMVKISMDVFVKKFQPERYELWLEGKDNAPIDHS 341
Query: 391 AKPRSSRLKDKNKDEGETLVKELFVQDVAQNNE 423
KP + GE +EL +++ Q+NE
Sbjct: 342 -KPTPEAAEFLG---GEAGAQELRIEN--QSNE 368
Score = 57 (25.1 bits), Expect = 1.7e-32, Sum P(2) = 1.7e-32
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 23 FHPTLAEFQDPIAYIFKIEKE-ASQYGICKI 52
FHPT+ EF++ YI +E + A + G+ KI
Sbjct: 14 FHPTVEEFKNFSRYIAYMESQGAHKAGLAKI 44
>UNIPROTKB|F1PJS3 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00530000063118 OMA:CENEKEM EMBL:AAEX03004965
Ensembl:ENSCAFT00000016655 Uniprot:F1PJS3
Length = 1476
Score = 369 (135.0 bits), Expect = 1.7e-32, P = 1.7e-32
Identities = 106/325 (32%), Positives = 167/325 (51%)
Query: 113 QSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALE-IESLYWK--ASVDKPFSVEYAN 169
Q+ YT + F A F+ Y N + E +E +W+ +++++ +VEY
Sbjct: 304 QAARDYTLRTFGEMADAFKSDYF----NMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGA 359
Query: 170 DMP----GSAFVPVR--KIREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSP 223
D+ GS F PVR KI+ + E + ++ WN+ + + S+L + +I G+ P
Sbjct: 360 DIASKEFGSGF-PVRDGKIKLSPEEEEYL-DSGWNLNNMPVMEQSVLAHITADICGMKLP 417
Query: 224 MVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINP 283
+Y+ M FS F WH EDH +S+NYLH G KTWYGVP AA E V++ E+
Sbjct: 418 WLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLENVMKK--LAPEL-- 473
Query: 284 LVTFATL-GEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAAN 342
V+ L + T+++P + VP R Q AGEFV+TFPRAYH GF+ GFN EA N
Sbjct: 474 FVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVN 533
Query: 343 IATPEWLNIAKDAAIRRASINYPPMVSHFQLLYDLAI-AMHSSIPVAVSAKPRSSRLKDK 401
T +WL + + ++ + SH +++ +A A + VA + + + + +
Sbjct: 534 FCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQKDMAIMIED 593
Query: 402 NKDEGETLVKELFVQDVAQNN-ELL 425
K ET V++L V D + + ELL
Sbjct: 594 EKALRET-VRKLGVIDSERMDFELL 617
>UNIPROTKB|F1MUR2 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0034648 "histone demethylase
activity (H3-dimethyl-K4 specific)" evidence=IEA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 GeneTree:ENSGT00530000063118
GO:GO:0034647 OMA:CENEKEM EMBL:DAAA02043305 IPI:IPI01001710
Ensembl:ENSBTAT00000028871 Uniprot:F1MUR2
Length = 1484
Score = 367 (134.2 bits), Expect = 2.8e-32, P = 2.8e-32
Identities = 104/324 (32%), Positives = 166/324 (51%)
Query: 113 QSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALE-IESLYWK--ASVDKPFSVEYAN 169
Q+ YT + F A F+ Y N + E +E +W+ +++++ +VEY
Sbjct: 312 QAARDYTLRTFGEMADAFKSDYF----NMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGA 367
Query: 170 DMP----GSAFVPVR--KIREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSP 223
D+ GS F PVR K++ + E + ++ WN+ + + S+L + +I G+ P
Sbjct: 368 DIASKEFGSGF-PVRDGKVKLSPEEEEYL-DSGWNLNNMPVMEQSVLAHITADICGMKLP 425
Query: 224 MVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINP 283
+Y+ M FS F WH EDH +S+NYLH G KTWYGVP AA E V++ E+
Sbjct: 426 WLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLETVMKK--LAPELF- 482
Query: 284 LVTFATLGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANI 343
+ L + T+++P + VP R Q AGEFV+TFPRAYH GF+ GFN EA N
Sbjct: 483 ISQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNF 542
Query: 344 ATPEWLNIAKDAAIRRASINYPPMVSHFQLLYDLAI-AMHSSIPVAVSAKPRSSRLKDKN 402
T +WL + + ++ + SH +++ +A A + VA + + + + +
Sbjct: 543 CTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQKDMAIMIEDE 602
Query: 403 KDEGETLVKELFVQDVAQNN-ELL 425
K ET V++L V D + + ELL
Sbjct: 603 KALRET-VRKLGVIDSERMDFELL 625
>UNIPROTKB|Q9U297 [details] [associations]
symbol:jmjd-2 "Lysine-specific demethylase 4" species:6239
"Caenorhabditis elegans" [GO:0070544 "histone H3-K36 demethylation"
evidence=IMP] [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=IMP] [GO:0016577 "histone demethylation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 GO:GO:0005634 GO:GO:0045892
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0016702
EMBL:AL110490 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 GO:GO:0051864
eggNOG:NOG317950 KO:K06709 PIR:T27007 RefSeq:NP_496969.2
ProteinModelPortal:Q9U297 SMR:Q9U297 DIP:DIP-26971N
MINT:MINT-1077527 STRING:Q9U297 PaxDb:Q9U297
EnsemblMetazoa:Y48B6A.11 GeneID:175080 KEGG:cel:CELE_Y48B6A.11
UCSC:Y48B6A.11 CTD:175080 WormBase:Y48B6A.11 HOGENOM:HOG000021888
InParanoid:Q9U297 OMA:SSEHADR NextBio:886668 Uniprot:Q9U297
Length = 922
Score = 332 (121.9 bits), Expect = 4.0e-32, Sum P(2) = 4.0e-32
Identities = 68/181 (37%), Positives = 102/181 (56%)
Query: 197 WNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKT 256
WNM + G++L EI GV + +Y M + F WHAED DL+S+N+LH GA K
Sbjct: 229 WNMNRL----GTILEDTNYEIKGVNTVYLYFGMYKTTFPWHAEDMDLYSINFLHFGAPKY 284
Query: 257 WYGVPMEAANAFEEVV-RVHGYGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRLVQN 315
W+ + E A+ FE + + Y E P A L KT +++PE+ AG+P +VQ
Sbjct: 285 WFAISSEHADRFERFMSQQFSYQNEYAPQCK-AFLRHKTYLVTPELLRQAGIPYATMVQR 343
Query: 316 AGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAAIRRASINYPPM-VSHFQLL 374
EF++TFPR YHMGF+ G+N E+ N A+ W++ KDA + + + + ++HF
Sbjct: 344 PNEFIITFPRGYHMGFNLGYNLAESTNFASQRWIDYGKDAVLCDCNKDSVKIDMTHFMAK 403
Query: 375 Y 375
Y
Sbjct: 404 Y 404
Score = 57 (25.1 bits), Expect = 4.0e-32, Sum P(2) = 4.0e-32
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 23 FHPTLAEFQDPIAYIFKIEKEASQY--GICKI 52
F+PT+ EF++ YI KIE+ GI KI
Sbjct: 90 FYPTMREFKNFSQYIKKIEQNGGHLKAGIAKI 121
>ZFIN|ZDB-GENE-120215-3 [details] [associations]
symbol:si:ch211-215f22.3 "si:ch211-215f22.3"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 ZFIN:ZDB-GENE-120215-3
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 EMBL:BX119315 RefSeq:XP_001921829.2
Ensembl:ENSDART00000151359 GeneID:100003413 KEGG:dre:100003413
Bgee:I3ITH4 Uniprot:I3ITH4
Length = 2012
Score = 330 (121.2 bits), Expect = 8.8e-31, Sum P(2) = 8.8e-31
Identities = 79/218 (36%), Positives = 114/218 (52%)
Query: 197 WNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKT 256
WN+ ++ + R I GV +P +Y M S FAWH ED DL+S+NYLH G K+
Sbjct: 151 WNIGRLNTILDMVERESGITIKGVNTPYLYFGMWKSTFAWHTEDMDLYSINYLHFGEPKS 210
Query: 257 WYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRLVQNA 316
WY VP E E + + G + A L K T+ISP + G+P ++ Q A
Sbjct: 211 WYVVPPEHGKRLERLAKGFFPGSAQS---CEAFLRHKMTLISPSILRKYGIPFEKVTQEA 267
Query: 317 GEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAAI---RR--ASINYPPMVSHF 371
G+F+VTFP YH GF+HGFNC E+ N AT W++ K A + R+ I+ V F
Sbjct: 268 GQFIVTFPYGYHAGFNHGFNCAESTNFATQRWIDYGKLATLCSCRKDMVKISMDVFVHKF 327
Query: 372 QL-LYDLAIAMHSSIPVAVSAK-PRSSRLKDKNKDEGE 407
Q Y L A ++P+ S P + ++ +N ++GE
Sbjct: 328 QPERYKLWKAGKDNVPIDHSKPTPEVAEIQKEN-EKGE 364
Score = 56 (24.8 bits), Expect = 8.8e-31, Sum P(2) = 8.8e-31
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 23 FHPTLAEFQDPIAYIFKIEKE-ASQYGICKI 52
FHPT EF+D YI +E + A + G+ K+
Sbjct: 20 FHPTKEEFKDFNRYIAYMESQGAHRAGMAKV 50
>UNIPROTKB|F1SMN9 [details] [associations]
symbol:F1SMN9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
InterPro:IPR002999 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
SMART:SM00333 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 OMA:DIIQGER
EMBL:AEMK01181236 EMBL:AEMK01189766 EMBL:CU137711 EMBL:CU481460
EMBL:CU571047 Ensembl:ENSSSCT00000005730 Uniprot:F1SMN9
Length = 1057
Score = 327 (120.2 bits), Expect = 5.2e-30, Sum P(2) = 5.2e-30
Identities = 69/176 (39%), Positives = 97/176 (55%)
Query: 193 GETPWNMRGVSRAKGSLLRFMKEE----IPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNY 248
G WN ++R ++L ++EE I GV +P +Y M + FAWH ED DL+S+NY
Sbjct: 146 GVDEWN---IARLN-TVLDVVEEECGISIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINY 201
Query: 249 LHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAGVP 308
LH G K+WY +P E E + + G+ + A L K T+ISP V G+P
Sbjct: 202 LHFGEPKSWYAIPPEHGKRLERLAQ--GFFPSSSQGCD-AFLRHKMTLISPSVLKKYGIP 258
Query: 309 CCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAAIRRASINY 364
++ Q AGEF++TFP YH GF+HGFNC E+ N AT W++ K A + Y
Sbjct: 259 FDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYGKVAKLTMCFTEY 314
Score = 44 (20.5 bits), Expect = 5.2e-30, Sum P(2) = 5.2e-30
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 23 FHPTLAEFQDPIAYIFKIE-KEASQYGICKI 52
F P++ EF++ Y+ +E K A + G+ K+
Sbjct: 19 FRPSMEEFREFNKYLAYMESKGAHRAGLAKV 49
>RGD|1307528 [details] [associations]
symbol:Kdm4c "lysine (K)-specific demethylase 4C" species:10116
"Rattus norvegicus" [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO] [GO:0019899 "enzyme
binding" evidence=ISO] [GO:0032454 "histone demethylase activity
(H3-K9 specific)" evidence=ISO] [GO:0033169 "histone H3-K9
demethylation" evidence=ISO] [GO:0050681 "androgen receptor
binding" evidence=ISO] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
InterPro:IPR002999 RGD:1307528 GO:GO:0046872 GO:GO:0008284
GO:GO:0008270 GO:GO:0006357 GO:GO:0000790 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0032454 IPI:IPI00959259
Ensembl:ENSRNOT00000009083 UCSC:RGD:1307528 ArrayExpress:F1LS62
Uniprot:F1LS62
Length = 1053
Score = 325 (119.5 bits), Expect = 8.3e-30, Sum P(2) = 8.3e-30
Identities = 68/169 (40%), Positives = 96/169 (56%)
Query: 193 GETPWNMRGVSRAKGSLLRFMKEE----IPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNY 248
G WN ++R ++L ++EE I GV +P +Y M + FAWH ED DL+S+NY
Sbjct: 146 GVDEWN---IARLN-TVLDVVEEECGISIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINY 201
Query: 249 LHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAGVP 308
LH G K+WY +P E E + + G+ + A L K T+ISP V G+P
Sbjct: 202 LHFGEPKSWYAIPPEHGKRLERLAQ--GFFPSSSQGCD-AFLRHKMTLISPSVLKKYGIP 258
Query: 309 CCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAAI 357
++ Q AGEF++TFP YH GF+HGFNC E+ N AT W++ K A +
Sbjct: 259 FDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYGKVAKL 307
Score = 44 (20.5 bits), Expect = 8.3e-30, Sum P(2) = 8.3e-30
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 23 FHPTLAEFQDPIAYIFKIE-KEASQYGICKI 52
F P++ EF++ Y+ +E K A + G+ K+
Sbjct: 19 FRPSMEEFREFNKYLAYMESKGAHRAGLAKV 49
>MGI|MGI:1924054 [details] [associations]
symbol:Kdm4c "lysine (K)-specific demethylase 4C"
species:10090 "Mus musculus" [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=ISO;IPI] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=ISO] [GO:0033169 "histone H3-K9 demethylation"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=ISO;IPI]
[GO:0055114 "oxidation-reduction process" evidence=IEA]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
MGI:MGI:1924054 GO:GO:0046872 GO:GO:0008284 GO:GO:0008270
GO:GO:0006357 GO:GO:0006351 GO:GO:0000790 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5141 PROSITE:PS01359
SMART:SM00333 PROSITE:PS50304 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 GeneTree:ENSGT00530000063342
GO:GO:0032454 HOGENOM:HOG000231125 KO:K06709 OrthoDB:EOG4N5VW5
CTD:23081 OMA:DIIQGER EMBL:AK173023 EMBL:AK053104 EMBL:AK081769
EMBL:AK144103 EMBL:BC020180 EMBL:BC042424 IPI:IPI00470006
RefSeq:NP_001165566.1 RefSeq:NP_659036.1 UniGene:Mm.209059
ProteinModelPortal:Q8VCD7 SMR:Q8VCD7 STRING:Q8VCD7
PhosphoSite:Q8VCD7 PRIDE:Q8VCD7 Ensembl:ENSMUST00000030102
Ensembl:ENSMUST00000077851 GeneID:76804 KEGG:mmu:76804
UCSC:uc008tjj.2 InParanoid:Q8VCD7 NextBio:345851 Bgee:Q8VCD7
CleanEx:MM_JMJD2C Genevestigator:Q8VCD7
GermOnline:ENSMUSG00000028397 Uniprot:Q8VCD7
Length = 1054
Score = 325 (119.5 bits), Expect = 8.4e-30, Sum P(2) = 8.4e-30
Identities = 68/169 (40%), Positives = 96/169 (56%)
Query: 193 GETPWNMRGVSRAKGSLLRFMKEE----IPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNY 248
G WN ++R ++L ++EE I GV +P +Y M + FAWH ED DL+S+NY
Sbjct: 146 GVDEWN---IARLN-TVLDVVEEECGISIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINY 201
Query: 249 LHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAGVP 308
LH G K+WY +P E E + + G+ + A L K T+ISP V G+P
Sbjct: 202 LHFGEPKSWYAIPPEHGKRLERLAQ--GFFPSSSQGCD-AFLRHKMTLISPSVLKKYGIP 258
Query: 309 CCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAAI 357
++ Q AGEF++TFP YH GF+HGFNC E+ N AT W++ K A +
Sbjct: 259 FDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYGKVAKL 307
Score = 44 (20.5 bits), Expect = 8.4e-30, Sum P(2) = 8.4e-30
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 23 FHPTLAEFQDPIAYIFKIE-KEASQYGICKI 52
F P++ EF++ Y+ +E K A + G+ K+
Sbjct: 19 FRPSMEEFREFNKYLAYMESKGAHRAGLAKV 49
>UNIPROTKB|Q9H3R0 [details] [associations]
symbol:KDM4C "Lysine-specific demethylase 4C" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0032454 "histone demethylase activity
(H3-K9 specific)" evidence=IMP;IDA] [GO:0033169 "histone H3-K9
demethylation" evidence=IMP;IDA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP] [GO:0050681 "androgen receptor binding" evidence=IPI]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0000790 "nuclear
chromatin" evidence=IDA] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS50016 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0046872 GO:GO:0008284
GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 GO:GO:0000790
GO:GO:0016702 eggNOG:COG5141 PROSITE:PS01359 SMART:SM00333
PROSITE:PS50304 Pathway_Interaction_DB:ar_pathway
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GO:GO:0032454 HOGENOM:HOG000231125 KO:K06709 OrthoDB:EOG4N5VW5
EMBL:AB037901 EMBL:AB018323 EMBL:AK304032 EMBL:AL354707
EMBL:AL137020 EMBL:AL161443 EMBL:AL445592 EMBL:AL513412
EMBL:BC104859 EMBL:BC104861 EMBL:BC143571 IPI:IPI00027642
IPI:IPI00645825 IPI:IPI00878778 RefSeq:NP_001140166.1
RefSeq:NP_001140167.1 RefSeq:NP_001140168.1 RefSeq:NP_055876.2
UniGene:Hs.709425 PDB:2XDP PDB:2XML PDBsum:2XDP PDBsum:2XML
ProteinModelPortal:Q9H3R0 SMR:Q9H3R0 IntAct:Q9H3R0 STRING:Q9H3R0
PhosphoSite:Q9H3R0 DMDM:97536525 PaxDb:Q9H3R0 PRIDE:Q9H3R0
Ensembl:ENST00000381306 Ensembl:ENST00000381309
Ensembl:ENST00000420847 Ensembl:ENST00000543771 GeneID:23081
KEGG:hsa:23081 UCSC:uc003zkg.3 UCSC:uc003zkh.3 CTD:23081
GeneCards:GC09P006720 H-InvDB:HIX0017555 HGNC:HGNC:17071 MIM:605469
neXtProt:NX_Q9H3R0 PharmGKB:PA164721503 InParanoid:Q9H3R0
OMA:DIIQGER PhylomeDB:Q9H3R0 BindingDB:Q9H3R0 ChEMBL:CHEMBL6175
ChiTaRS:KDM4C EvolutionaryTrace:Q9H3R0 GenomeRNAi:23081
NextBio:44205 ArrayExpress:Q9H3R0 Bgee:Q9H3R0 CleanEx:HS_JMJD2C
Genevestigator:Q9H3R0 GermOnline:ENSG00000107077 Uniprot:Q9H3R0
Length = 1056
Score = 325 (119.5 bits), Expect = 8.4e-30, Sum P(2) = 8.4e-30
Identities = 68/169 (40%), Positives = 96/169 (56%)
Query: 193 GETPWNMRGVSRAKGSLLRFMKEE----IPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNY 248
G WN ++R ++L ++EE I GV +P +Y M + FAWH ED DL+S+NY
Sbjct: 146 GVDEWN---IARLN-TVLDVVEEECGISIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINY 201
Query: 249 LHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAGVP 308
LH G K+WY +P E E + + G+ + A L K T+ISP V G+P
Sbjct: 202 LHFGEPKSWYAIPPEHGKRLERLAQ--GFFPSSSQGCD-AFLRHKMTLISPSVLKKYGIP 258
Query: 309 CCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAAI 357
++ Q AGEF++TFP YH GF+HGFNC E+ N AT W++ K A +
Sbjct: 259 FDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYGKVAKL 307
Score = 44 (20.5 bits), Expect = 8.4e-30, Sum P(2) = 8.4e-30
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 23 FHPTLAEFQDPIAYIFKIE-KEASQYGICKI 52
F P++ EF++ Y+ +E K A + G+ K+
Sbjct: 19 FRPSMEEFREFNKYLAYMESKGAHRAGLAKV 49
>UNIPROTKB|E1C6D5 [details] [associations]
symbol:KDM4A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005737 GO:GO:0005813 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 OMA:KRTAGCC
EMBL:AADN02012723 EMBL:AADN02012724 IPI:IPI00586868
Ensembl:ENSGALT00000016376 Uniprot:E1C6D5
Length = 1017
Score = 317 (116.6 bits), Expect = 1.5e-29, Sum P(3) = 1.5e-29
Identities = 59/141 (41%), Positives = 82/141 (58%)
Query: 217 IPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHG 276
I GV +P +Y M + FAWH ED DL+S+NYLH G K+WY +P E E + +
Sbjct: 168 IEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSIPPEHGKRLERLAKGFF 227
Query: 277 YGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFN 336
G + A L K T+ISP + G+P ++ Q AGEF++TFP +YH GF+HGFN
Sbjct: 228 PGSAQS---CEAFLRHKMTLISPSILKKYGIPFDKVTQEAGEFMITFPYSYHAGFNHGFN 284
Query: 337 CGEAANIATPEWLNIAKDAAI 357
C E+ N AT W+ K + +
Sbjct: 285 CAESTNFATLRWIEYGKQSVL 305
Score = 53 (23.7 bits), Expect = 1.5e-29, Sum P(3) = 1.5e-29
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 23 FHPTLAEFQDPIAYIFKIEKE-ASQYGICKI 52
F PT+ +F+D YI +E + A + G+ KI
Sbjct: 17 FRPTMEQFRDFSRYIAYVEAQGAHRAGLAKI 47
Score = 47 (21.6 bits), Expect = 1.5e-29, Sum P(3) = 1.5e-29
Identities = 12/56 (21%), Positives = 29/56 (51%)
Query: 385 IPVAVSAKPRSSRLKDKNKDEGETLVKELFVQDVAQNNELLHVLGQGSPIVLLPQS 440
+ +A S + + +L+++ ++E E V +L + + + +L Q +P + P S
Sbjct: 458 VGMAKSEELKVVKLEEEEEEEQEAAVLDLSISHASNSASVLPTSKQRAPSSVQPSS 513
>UNIPROTKB|O94953 [details] [associations]
symbol:KDM4B "Lysine-specific demethylase 4B" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 EMBL:CH471139 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 eggNOG:COG5141 PROSITE:PS01359 SMART:SM00333
PROSITE:PS50304 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 KO:K06709 CTD:23030 EMBL:AB020683 EMBL:AC005595
EMBL:AC022517 EMBL:BC063889 EMBL:BC136611 EMBL:AL133622
IPI:IPI00013205 IPI:IPI00440491 PIR:T43460 RefSeq:NP_055830.1
UniGene:Hs.654816 ProteinModelPortal:O94953 SMR:O94953
DIP:DIP-47283N IntAct:O94953 MINT:MINT-1427202 STRING:O94953
PhosphoSite:O94953 PaxDb:O94953 PRIDE:O94953
Ensembl:ENST00000159111 Ensembl:ENST00000381759 GeneID:23030
KEGG:hsa:23030 UCSC:uc002mbq.4 UCSC:uc010xil.1
GeneCards:GC19P004969 HGNC:HGNC:29136 MIM:609765 neXtProt:NX_O94953
PharmGKB:PA164721452 InParanoid:O94953 OrthoDB:EOG4N5VW5
PhylomeDB:O94953 ChiTaRS:KDM4B GenomeRNAi:23030 NextBio:44006
ArrayExpress:O94953 Bgee:O94953 CleanEx:HS_JMJD2B
Genevestigator:O94953 Uniprot:O94953
Length = 1096
Score = 317 (116.6 bits), Expect = 2.7e-29, Sum P(3) = 2.7e-29
Identities = 64/159 (40%), Positives = 85/159 (53%)
Query: 197 WNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKT 256
WN+ + + R I GV +P +Y M + FAWH ED DL+S+NYLH G K+
Sbjct: 149 WNIGSLRTILDMVERECGTIIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKS 208
Query: 257 WYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRLVQNA 316
WY +P E E + G A L K T+ISP + G+P R+ Q A
Sbjct: 209 WYAIPPEHGKRLERLAIGFFPGSSQG---CDAFLRHKMTLISPIILKKYGIPFSRITQEA 265
Query: 317 GEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDA 355
GEF++TFP YH GF+HGFNC E+ N AT W++ K A
Sbjct: 266 GEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYGKVA 304
Score = 56 (24.8 bits), Expect = 2.7e-29, Sum P(3) = 2.7e-29
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 23 FHPTLAEFQDPIAYIFKIEKE-ASQYGICKI 52
F PT+ EF+D Y+ IE + A + G+ KI
Sbjct: 18 FRPTMEEFKDFNKYVAYIESQGAHRAGLAKI 48
Score = 43 (20.2 bits), Expect = 2.7e-29, Sum P(3) = 2.7e-29
Identities = 12/51 (23%), Positives = 21/51 (41%)
Query: 375 YDLAIAMHSSIPVAVSAKPRSSRLKDKNKDEGETLVKELFVQDVAQNNELL 425
Y A+ P+A K + L K++ + L+ E+ +N E L
Sbjct: 693 YCQALQTEKEAPIASLGKGCPATLPSKSRQKTRPLIPEMCFTSGGENTEPL 743
>UNIPROTKB|F5GX28 [details] [associations]
symbol:KDM4B "Lysine-specific demethylase 4B" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:AC005595
EMBL:AC022517 HGNC:HGNC:29136 ChiTaRS:KDM4B EMBL:AC053467
EMBL:AC093033 EMBL:AC104520 IPI:IPI00922876
ProteinModelPortal:F5GX28 SMR:F5GX28 Ensembl:ENST00000536461
UCSC:uc010xim.2 OMA:QTEKEAP ArrayExpress:F5GX28 Bgee:F5GX28
Uniprot:F5GX28
Length = 1130
Score = 317 (116.6 bits), Expect = 3.2e-29, Sum P(3) = 3.2e-29
Identities = 64/159 (40%), Positives = 85/159 (53%)
Query: 197 WNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKT 256
WN+ + + R I GV +P +Y M + FAWH ED DL+S+NYLH G K+
Sbjct: 149 WNIGSLRTILDMVERECGTIIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKS 208
Query: 257 WYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRLVQNA 316
WY +P E E + G A L K T+ISP + G+P R+ Q A
Sbjct: 209 WYAIPPEHGKRLERLAIGFFPGSSQG---CDAFLRHKMTLISPIILKKYGIPFSRITQEA 265
Query: 317 GEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDA 355
GEF++TFP YH GF+HGFNC E+ N AT W++ K A
Sbjct: 266 GEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYGKVA 304
Score = 56 (24.8 bits), Expect = 3.2e-29, Sum P(3) = 3.2e-29
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 23 FHPTLAEFQDPIAYIFKIEKE-ASQYGICKI 52
F PT+ EF+D Y+ IE + A + G+ KI
Sbjct: 18 FRPTMEEFKDFNKYVAYIESQGAHRAGLAKI 48
Score = 43 (20.2 bits), Expect = 3.2e-29, Sum P(3) = 3.2e-29
Identities = 12/51 (23%), Positives = 21/51 (41%)
Query: 375 YDLAIAMHSSIPVAVSAKPRSSRLKDKNKDEGETLVKELFVQDVAQNNELL 425
Y A+ P+A K + L K++ + L+ E+ +N E L
Sbjct: 727 YCQALQTEKEAPIASLGKGCPATLPSKSRQKTRPLIPEMCFTSGGENTEPL 777
>UNIPROTKB|E1BX38 [details] [associations]
symbol:Gga.52669 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 OMA:QTEKEAP EMBL:AADN02062013
IPI:IPI00735114 Ensembl:ENSGALT00000006511 ArrayExpress:E1BX38
Uniprot:E1BX38
Length = 1095
Score = 322 (118.4 bits), Expect = 4.5e-29, Sum P(2) = 4.5e-29
Identities = 66/163 (40%), Positives = 91/163 (55%)
Query: 197 WNMRGVSRAKGSLLRFMKEE----IPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMG 252
WN+ ++ +LL ++ E I GV +P +Y M + FAWH ED DL+S+NYLH G
Sbjct: 149 WNIGNLN----TLLDMVEHECGIIIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFG 204
Query: 253 ASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRL 312
K+WY +P E E + + G A L K T+ISP + G+P R+
Sbjct: 205 EPKSWYAIPPEHGKRLERLAKGFFPGSSQG---CDAFLRHKMTLISPSILKKYGIPFDRI 261
Query: 313 VQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDA 355
Q AGEF++TFP YH GF+HGFNC E+ N AT W++ K A
Sbjct: 262 TQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYGKMA 304
Score = 52 (23.4 bits), Expect = 4.5e-29, Sum P(2) = 4.5e-29
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 23 FHPTLAEFQDPIAYIFKIEKE-ASQYGICKI 52
F PTL EF++ Y+ IE + A + G+ K+
Sbjct: 18 FRPTLEEFREFGKYVAYIESQGAHRAGLAKV 48
>MGI|MGI:2446210 [details] [associations]
symbol:Kdm4a "lysine (K)-specific demethylase 4A"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0014898 "cardiac muscle hypertrophy in response to stress"
evidence=IMP] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016577
"histone demethylation" evidence=ISO] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=ISO] [GO:0055114 "oxidation-reduction process"
evidence=ISO] [GO:0070544 "histone H3-K36 demethylation"
evidence=ISO] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS50016 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
InterPro:IPR002999 MGI:MGI:2446210 GO:GO:0005737 GO:GO:0005813
GO:GO:0045892 GO:GO:0005730 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 eggNOG:COG5141 PROSITE:PS01359
SMART:SM00333 PROSITE:PS50304 GO:GO:0035064 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 CTD:9682 KO:K06709
OMA:KRTAGCC OrthoDB:EOG4QRH37 ChiTaRS:Kdm4A EMBL:AK129187
EMBL:AK054095 EMBL:AK136085 EMBL:AK145066 EMBL:AK145947
EMBL:AL626764 EMBL:BC028866 IPI:IPI00169645 IPI:IPI00648673
RefSeq:NP_001155295.1 RefSeq:NP_759014.2 UniGene:Mm.234234
ProteinModelPortal:Q8BW72 SMR:Q8BW72 STRING:Q8BW72
PhosphoSite:Q8BW72 PRIDE:Q8BW72 Ensembl:ENSMUST00000097911
Ensembl:ENSMUST00000106403 Ensembl:ENSMUST00000106406 GeneID:230674
KEGG:mmu:230674 HOVERGEN:HBG080483 InParanoid:A2A8L8 NextBio:380043
Bgee:Q8BW72 CleanEx:MM_JMJD2A Genevestigator:Q8BW72
GermOnline:ENSMUSG00000033326 Uniprot:Q8BW72
Length = 1064
Score = 321 (118.1 bits), Expect = 5.0e-29, Sum P(2) = 5.0e-29
Identities = 67/165 (40%), Positives = 93/165 (56%)
Query: 197 WNMRGVSRAKGSLLRFMKEE----IPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMG 252
WN + R K ++L +++E I GV +P +Y M + FAWH ED DL+S+NYLH G
Sbjct: 148 WN---IGRLK-TILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFG 203
Query: 253 ASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRL 312
K+WY VP E E + + G + A L K T+ISP + G+P ++
Sbjct: 204 EPKSWYSVPPEHGKRLERLAKGFFPGSAQS---CEAFLRHKMTLISPLMLKKYGIPFDKV 260
Query: 313 VQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAAI 357
Q AGEF++TFP YH GF+HGFNC E+ N AT W+ K A +
Sbjct: 261 TQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAVL 305
Score = 54 (24.1 bits), Expect = 5.0e-29, Sum P(2) = 5.0e-29
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 23 FHPTLAEFQDPIAYIFKIEKE-ASQYGICKI 52
F+PT+ EF++ YI IE + A + G+ K+
Sbjct: 17 FYPTMEEFRNFSRYIAYIESQGAHRAGLAKV 47
>UNIPROTKB|E2RFE0 [details] [associations]
symbol:KDM4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005737 GO:GO:0005813 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 CTD:9682 KO:K06709
OMA:KRTAGCC EMBL:AAEX03009807 EMBL:AAEX03009806 RefSeq:XP_851005.1
Ensembl:ENSCAFT00000007898 GeneID:482530 KEGG:cfa:482530
NextBio:20857109 Uniprot:E2RFE0
Length = 1066
Score = 321 (118.1 bits), Expect = 1.0e-28, Sum P(2) = 1.0e-28
Identities = 67/165 (40%), Positives = 93/165 (56%)
Query: 197 WNMRGVSRAKGSLLRFMKEE----IPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMG 252
WN + R K ++L +++E I GV +P +Y M + FAWH ED DL+S+NYLH G
Sbjct: 148 WN---IGRLK-TILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFG 203
Query: 253 ASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRL 312
K+WY VP E E + + G + A L K T+ISP + G+P ++
Sbjct: 204 EPKSWYSVPPEHGKRLERLAKGFFPGSAQS---CEAFLRHKMTLISPLMLKKYGIPFDKV 260
Query: 313 VQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAAI 357
Q AGEF++TFP YH GF+HGFNC E+ N AT W+ K A +
Sbjct: 261 TQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAVL 305
Score = 51 (23.0 bits), Expect = 1.0e-28, Sum P(2) = 1.0e-28
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 23 FHPTLAEFQDPIAYIFKIEKE-ASQYGICKI 52
F+PT+ EF++ Y+ IE + A + G+ K+
Sbjct: 17 FYPTMEEFRNFSRYMAYIESQGAHRAGLAKV 47
>FB|FBgn0036004 [details] [associations]
symbol:Jarid2 "Jumonji, AT rich interactive domain 2"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=ISS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005719
"nuclear euchromatin" evidence=IDA] [GO:0035098 "ESC/E(Z) complex"
evidence=IDA] [GO:0061085 "regulation of histone H3-K27
methylation" evidence=IMP] [GO:0005700 "polytene chromosome"
evidence=IDA] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR017956 Pfam:PF01388 Pfam:PF02373 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00384 SMART:SM00558 EMBL:AE014296
GO:GO:0003677 GO:GO:0035098 GO:GO:0005719 GO:GO:0005700
Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:Q24573 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 GO:GO:0061085 CTD:3720
KO:K11478 GeneTree:ENSGT00530000063118 FlyBase:FBgn0036004
RefSeq:NP_648324.1 UniGene:Dm.29618 ProteinModelPortal:Q9VT00
SMR:Q9VT00 MINT:MINT-1562739 STRING:Q9VT00
EnsemblMetazoa:FBtr0076468 GeneID:39103 KEGG:dme:Dmel_CG3654
UCSC:CG3654-RD InParanoid:Q9VT00 OMA:HESCEPA PhylomeDB:Q9VT00
GenomeRNAi:39103 NextBio:811931 ArrayExpress:Q9VT00 Bgee:Q9VT00
Uniprot:Q9VT00
Length = 2351
Score = 305 (112.4 bits), Expect = 1.0e-28, Sum P(2) = 1.0e-28
Identities = 77/238 (32%), Positives = 118/238 (49%)
Query: 187 GEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSL 246
G+G PWN++ ++ GS+LR + + GVT P +++ MLFS W+ + H L +
Sbjct: 2029 GKGSNYARHPWNLKVLTNNSGSVLRSLGP-VMGVTVPTLHVGMLFSACCWYRDPHGLSWI 2087
Query: 247 NYLHMGASKTWYGVPME-AAN---AFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVF 302
YLH GASK WYG+P + +AN A ++ H + I L T M+ P +
Sbjct: 2088 EYLHTGASKLWYGIPDDQSANFRAALTSLIPTHCQNKTI-------WLPCDTVMVPPHML 2140
Query: 303 VGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAAIRRASI 362
GV CR+ Q GEF+V FPRAY + G+ E+ AT WL++AKD
Sbjct: 2141 TDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATMSWLDLAKDDFRDIHES 2200
Query: 363 NYPPMVSHFQLL----YDLAI---AMHSSIPVAVSAKPRSSRLKDKNKDEGETLVKEL 413
P M S QLL YD + A+H +P+ + S +++ + G T +++
Sbjct: 2201 CEPAMFSLEQLLFALGYDQRVNSEALHQMLPMLNDVCEKESAAREQLRAAGVTSTEKV 2258
Score = 90 (36.7 bits), Expect = 1.0e-28, Sum P(2) = 1.0e-28
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 20 APEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
AP F PT EF DPI +I +I A+++GICKI
Sbjct: 1741 APIFRPTEKEFADPIEFIERITPIAARFGICKI 1773
>FB|FBgn0053182 [details] [associations]
symbol:Kdm4B "Histone demethylase 4B" species:7227
"Drosophila melanogaster" [GO:0016577 "histone demethylation"
evidence=ISS] [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=ISS;IDA;IMP] [GO:0005634 "nucleus"
evidence=ISS] [GO:0070544 "histone H3-K36 demethylation"
evidence=IMP] [GO:0033169 "histone H3-K9 demethylation"
evidence=IDA;IMP] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=IDA;IMP] InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00558 EMBL:AE013599 GO:GO:0005634
GO:GO:0045892 GO:GO:0046872 GO:GO:0006351 GO:GO:0016702
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 eggNOG:NOG317950
GO:GO:0032454 KO:K06709 RefSeq:NP_001163137.1 RefSeq:NP_001163138.1
RefSeq:NP_001163139.1 RefSeq:NP_788344.2 UniGene:Dm.6975
ProteinModelPortal:Q9V6L0 SMR:Q9V6L0 PaxDb:Q9V6L0
EnsemblMetazoa:FBtr0087770 EnsemblMetazoa:FBtr0302052
EnsemblMetazoa:FBtr0302053 EnsemblMetazoa:FBtr0302054 GeneID:318918
KEGG:dme:Dmel_CG33182 UCSC:CG33182-RA CTD:23030 FlyBase:FBgn0053182
InParanoid:Q9V6L0 OMA:MERWIEY OrthoDB:EOG4NVX19 PhylomeDB:Q9V6L0
GenomeRNAi:318918 NextBio:846567 GermOnline:CG33182 Uniprot:Q9V6L0
Length = 590
Score = 317 (116.6 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 74/191 (38%), Positives = 100/191 (52%)
Query: 197 WNMRGVSRAKGSLLRFMKEE----IPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMG 252
WN ++R G++L ++ ++ I GV + +Y M + FAWH ED DL+S+NYLH G
Sbjct: 146 WN---INRL-GTILDYVNKDYNIQIDGVNTAYLYFGMWKTTFAWHTEDMDLYSINYLHFG 201
Query: 253 ASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRL 312
A KTWY VP E E+V + N A L K T+ISP++ VP ++
Sbjct: 202 APKTWYVVPPECGRKLEKVANQYFPASYKN---CNAYLRHKMTLISPQILKQHDVPVSKI 258
Query: 313 VQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAAIRRAS-----INYPPM 367
Q AGE ++TFP YH GF+HGFNC E+ N A W+ K A S I+
Sbjct: 259 TQEAGEIMITFPFGYHAGFNHGFNCAESTNFAMERWIEYGKRAVQCTCSNDMVKISMDTF 318
Query: 368 VSHFQL-LYDL 377
V FQ YDL
Sbjct: 319 VKRFQSDRYDL 329
Score = 50 (22.7 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 14 LKTLPVAPEFHPTLAEFQDPIAYIFKIEKE-ASQYGICKI 52
+ +P F PT EF+D Y+ +E + A + G+ K+
Sbjct: 3 MSEVPRIKVFRPTWEEFKDFPKYVAYMESQGAHKAGLAKV 42
>UNIPROTKB|O75164 [details] [associations]
symbol:KDM4A "Lysine-specific demethylase 4A" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=IDA] [GO:0016577 "histone demethylation" evidence=IDA]
[GO:0035064 "methylated histone residue binding" evidence=IDA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070544 "histone
H3-K36 demethylation" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS50016 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0005737 GO:GO:0005813
GO:GO:0045892 GO:GO:0019048 GO:GO:0005730 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
eggNOG:COG5141 PROSITE:PS01359 SMART:SM00333 PROSITE:PS50304
GO:GO:0035064 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GO:GO:0051864 PDB:2YBP PDB:2YBS PDBsum:2YBP
PDBsum:2YBS PDB:3U4S PDBsum:3U4S CTD:9682 EMBL:AB014577
EMBL:AL451062 EMBL:AC092815 EMBL:BC002558 IPI:IPI00005666
RefSeq:NP_055478.2 UniGene:Hs.155983 PDB:2GF7 PDB:2GFA PDB:2GP3
PDB:2GP5 PDB:2OQ6 PDB:2OQ7 PDB:2OS2 PDB:2OT7 PDB:2OX0 PDB:2P5B
PDB:2PXJ PDB:2Q8C PDB:2Q8D PDB:2Q8E PDB:2QQR PDB:2QQS PDB:2VD7
PDB:2WWJ PDB:2YBK PDB:3NJY PDB:3PDQ PDB:3RVH PDB:4AI9 PDB:4GD4
PDBsum:2GF7 PDBsum:2GFA PDBsum:2GP3 PDBsum:2GP5 PDBsum:2OQ6
PDBsum:2OQ7 PDBsum:2OS2 PDBsum:2OT7 PDBsum:2OX0 PDBsum:2P5B
PDBsum:2PXJ PDBsum:2Q8C PDBsum:2Q8D PDBsum:2Q8E PDBsum:2QQR
PDBsum:2QQS PDBsum:2VD7 PDBsum:2WWJ PDBsum:2YBK PDBsum:3NJY
PDBsum:3PDQ PDBsum:3RVH PDBsum:4AI9 PDBsum:4GD4
ProteinModelPortal:O75164 SMR:O75164 DIP:DIP-29372N IntAct:O75164
MINT:MINT-2829088 STRING:O75164 PhosphoSite:O75164 PRIDE:O75164
Ensembl:ENST00000372396 GeneID:9682 KEGG:hsa:9682 UCSC:uc001cjx.3
GeneCards:GC01P044115 H-InvDB:HIX0020610 HGNC:HGNC:22978
HPA:HPA007610 MIM:609764 neXtProt:NX_O75164 PharmGKB:PA164721403
HOGENOM:HOG000231125 InParanoid:O75164 KO:K06709 OMA:KRTAGCC
OrthoDB:EOG4QRH37 PhylomeDB:O75164 BindingDB:O75164
ChEMBL:CHEMBL5896 ChiTaRS:Kdm4A EvolutionaryTrace:O75164
GenomeRNAi:9682 NextBio:36361 ArrayExpress:O75164 Bgee:O75164
CleanEx:HS_JMJD2A Genevestigator:O75164 GermOnline:ENSG00000066135
Uniprot:O75164
Length = 1064
Score = 318 (117.0 bits), Expect = 3.3e-28, Sum P(2) = 3.3e-28
Identities = 66/165 (40%), Positives = 93/165 (56%)
Query: 197 WNMRGVSRAKGSLLRFMKEE----IPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMG 252
WN + R + ++L +++E I GV +P +Y M + FAWH ED DL+S+NYLH G
Sbjct: 148 WN---IGRLR-TILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFG 203
Query: 253 ASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRL 312
K+WY VP E E + + G + A L K T+ISP + G+P ++
Sbjct: 204 EPKSWYSVPPEHGKRLERLAKGFFPGSAQS---CEAFLRHKMTLISPLMLKKYGIPFDKV 260
Query: 313 VQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAAI 357
Q AGEF++TFP YH GF+HGFNC E+ N AT W+ K A +
Sbjct: 261 TQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAVL 305
Score = 54 (24.1 bits), Expect = 3.3e-28, Sum P(2) = 3.3e-28
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 23 FHPTLAEFQDPIAYIFKIEKE-ASQYGICKI 52
F+PT+ EF++ YI IE + A + G+ K+
Sbjct: 17 FYPTMEEFRNFSRYIAYIESQGAHRAGLAKV 47
>UNIPROTKB|Q5RD88 [details] [associations]
symbol:KDM4A "Lysine-specific demethylase 4A" species:9601
"Pongo abelii" [GO:0035064 "methylated histone residue binding"
evidence=ISS] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS50016 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
InterPro:IPR002999 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 SMART:SM00333 PROSITE:PS50304
GO:GO:0035064 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 CTD:9682 KO:K06709 EMBL:CR858028
RefSeq:NP_001125120.1 UniGene:Pab.1791 ProteinModelPortal:Q5RD88
SMR:Q5RD88 GeneID:100172003 KEGG:pon:100172003 InParanoid:Q5RD88
Uniprot:Q5RD88
Length = 1064
Score = 318 (117.0 bits), Expect = 3.3e-28, Sum P(2) = 3.3e-28
Identities = 66/165 (40%), Positives = 93/165 (56%)
Query: 197 WNMRGVSRAKGSLLRFMKEE----IPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMG 252
WN + R + ++L +++E I GV +P +Y M + FAWH ED DL+S+NYLH G
Sbjct: 148 WN---IGRLR-TILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFG 203
Query: 253 ASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRL 312
K+WY VP E E + + G + A L K T+ISP + G+P ++
Sbjct: 204 EPKSWYSVPPEHGKRLERLAKGFFPGSAQS---CEAFLRHKMTLISPLMLKKYGIPFDKV 260
Query: 313 VQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAAI 357
Q AGEF++TFP YH GF+HGFNC E+ N AT W+ K A +
Sbjct: 261 TQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAVL 305
Score = 54 (24.1 bits), Expect = 3.3e-28, Sum P(2) = 3.3e-28
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 23 FHPTLAEFQDPIAYIFKIEKE-ASQYGICKI 52
F+PT+ EF++ YI IE + A + G+ K+
Sbjct: 17 FYPTMEEFRNFSRYIAYIESQGAHRAGLAKV 47
>UNIPROTKB|E1BPL5 [details] [associations]
symbol:KDM4A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005737 GO:GO:0005813 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 CTD:9682 KO:K06709
OMA:KRTAGCC EMBL:DAAA02009042 IPI:IPI00690786 RefSeq:NP_001193245.1
UniGene:Bt.58925 Ensembl:ENSBTAT00000002687 GeneID:512622
KEGG:bta:512622 NextBio:20870473 Uniprot:E1BPL5
Length = 1066
Score = 318 (117.0 bits), Expect = 3.3e-28, Sum P(2) = 3.3e-28
Identities = 66/165 (40%), Positives = 93/165 (56%)
Query: 197 WNMRGVSRAKGSLLRFMKEE----IPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMG 252
WN + R + ++L +++E I GV +P +Y M + FAWH ED DL+S+NYLH G
Sbjct: 148 WN---IGRLR-TILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFG 203
Query: 253 ASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRL 312
K+WY VP E E + + G + A L K T+ISP + G+P ++
Sbjct: 204 EPKSWYSVPPEHGKRLERLAKGFFPGSAQS---CEAFLRHKMTLISPLMLKKYGIPFDKV 260
Query: 313 VQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAAI 357
Q AGEF++TFP YH GF+HGFNC E+ N AT W+ K A +
Sbjct: 261 TQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAVL 305
Score = 54 (24.1 bits), Expect = 3.3e-28, Sum P(2) = 3.3e-28
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 23 FHPTLAEFQDPIAYIFKIEKE-ASQYGICKI 52
F+PT+ EF++ YI IE + A + G+ K+
Sbjct: 17 FYPTMEEFRNFSRYIAYIESQGAHRAGLAKV 47
>UNIPROTKB|E1BA41 [details] [associations]
symbol:KDM4B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR007527 Pfam:PF02373 PROSITE:PS50966 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 InterPro:IPR002999 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
SMART:SM00333 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 KO:K06709 CTD:23030
OMA:QTEKEAP EMBL:DAAA02019590 EMBL:DAAA02019591 EMBL:DAAA02019592
IPI:IPI00689692 RefSeq:XP_002688966.2 RefSeq:XP_584880.4
Ensembl:ENSBTAT00000020586 GeneID:508141 KEGG:bta:508141
Uniprot:E1BA41
Length = 1116
Score = 317 (116.6 bits), Expect = 4.6e-28, Sum P(2) = 4.6e-28
Identities = 64/159 (40%), Positives = 85/159 (53%)
Query: 197 WNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKT 256
WN+ + + R I GV +P +Y M + FAWH ED DL+S+NYLH G K+
Sbjct: 149 WNIGNLRTILDMVERECGTIIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKS 208
Query: 257 WYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRLVQNA 316
WY +P E E + G A L K T+ISP + G+P R+ Q A
Sbjct: 209 WYAIPPEHGKRLERLAIGFFPGSSQG---CDAFLRHKMTLISPIILKKYGIPFSRITQEA 265
Query: 317 GEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDA 355
GEF++TFP YH GF+HGFNC E+ N AT W++ K A
Sbjct: 266 GEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYGKVA 304
Score = 56 (24.8 bits), Expect = 4.6e-28, Sum P(2) = 4.6e-28
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 23 FHPTLAEFQDPIAYIFKIEKE-ASQYGICKI 52
F PT+ EF+D Y+ IE + A + G+ KI
Sbjct: 18 FRPTMEEFKDFNKYVAYIESQGAHRAGLAKI 48
>UNIPROTKB|E2R243 [details] [associations]
symbol:KDM4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR007527 Pfam:PF02373 PROSITE:PS50966
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 OMA:QTEKEAP EMBL:AAEX03012537
EMBL:AAEX03012538 EMBL:AAEX03012539 Ensembl:ENSCAFT00000030040
Uniprot:E2R243
Length = 1133
Score = 317 (116.6 bits), Expect = 4.8e-28, Sum P(2) = 4.8e-28
Identities = 64/159 (40%), Positives = 85/159 (53%)
Query: 197 WNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKT 256
WN+ + + R I GV +P +Y M + FAWH ED DL+S+NYLH G K+
Sbjct: 149 WNIGSLRTILDMVERECGTIIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKS 208
Query: 257 WYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRLVQNA 316
WY +P E E + G A L K T+ISP + G+P R+ Q A
Sbjct: 209 WYAIPPEHGKRLERLAIGFFPGSSQG---CDAFLRHKMTLISPIILKKYGIPFSRITQEA 265
Query: 317 GEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDA 355
GEF++TFP YH GF+HGFNC E+ N AT W++ K A
Sbjct: 266 GEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYGKVA 304
Score = 56 (24.8 bits), Expect = 4.8e-28, Sum P(2) = 4.8e-28
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 23 FHPTLAEFQDPIAYIFKIEKE-ASQYGICKI 52
F PT+ EF+D Y+ IE + A + G+ KI
Sbjct: 18 FRPTMEEFKDFNKYVAYIESQGAHRAGLAKI 48
>MGI|MGI:2442355 [details] [associations]
symbol:Kdm4b "lysine (K)-specific demethylase 4B"
species:10090 "Mus musculus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS50016 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 InterPro:IPR002999 MGI:MGI:2442355
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5141 PROSITE:PS01359 SMART:SM00333
PROSITE:PS50304 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 HOGENOM:HOG000231125
KO:K06709 CTD:23030 OrthoDB:EOG4N5VW5 ChiTaRS:KDM4B EMBL:AK129233
EMBL:AK141879 EMBL:BC005480 EMBL:BC007145 IPI:IPI00127444
IPI:IPI00460708 RefSeq:NP_742144.1 UniGene:Mm.45047
ProteinModelPortal:Q91VY5 SMR:Q91VY5 STRING:Q91VY5
PhosphoSite:Q91VY5 PRIDE:Q91VY5 Ensembl:ENSMUST00000025036
GeneID:193796 KEGG:mmu:193796 UCSC:uc008dbu.2 InParanoid:Q91VY5
OMA:QRTRPLI NextBio:371516 Bgee:Q91VY5 CleanEx:MM_JMJD2B
Genevestigator:Q91VY5 GermOnline:ENSMUSG00000024201 Uniprot:Q91VY5
Length = 1086
Score = 317 (116.6 bits), Expect = 5.3e-28, Sum P(2) = 5.3e-28
Identities = 64/159 (40%), Positives = 85/159 (53%)
Query: 197 WNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKT 256
WN+ + + R I GV +P +Y M + FAWH ED DL+S+NYLH G K+
Sbjct: 149 WNIGNLRTILDMVERECGTIIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKS 208
Query: 257 WYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRLVQNA 316
WY +P E E + G A L K T+ISP + G+P R+ Q A
Sbjct: 209 WYAIPPEHGKRLERLAIGFFPGSSQG---CDAFLRHKMTLISPIILKKYGIPFSRITQEA 265
Query: 317 GEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDA 355
GEF++TFP YH GF+HGFNC E+ N AT W++ K A
Sbjct: 266 GEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYGKVA 304
Score = 55 (24.4 bits), Expect = 5.3e-28, Sum P(2) = 5.3e-28
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 23 FHPTLAEFQDPIAYIFKIEKE-ASQYGICKI 52
F PT+ EF+D Y+ IE + A + G+ KI
Sbjct: 18 FRPTMDEFRDFNRYVAYIESQGAHRAGLAKI 48
>UNIPROTKB|F1PHR7 [details] [associations]
symbol:KDM4C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050681 "androgen receptor binding"
evidence=IEA] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0046872 GO:GO:0008284 GO:GO:0008270 GO:GO:0006357
GO:GO:0000790 SMART:SM00333 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 GeneTree:ENSGT00530000063342 GO:GO:0032454 OMA:DIIQGER
EMBL:AAEX03007833 EMBL:AAEX03007834 EMBL:AAEX03007835
Ensembl:ENSCAFT00000002249 Uniprot:F1PHR7
Length = 1053
Score = 323 (118.8 bits), Expect = 2.4e-27, P = 2.4e-27
Identities = 67/165 (40%), Positives = 95/165 (57%)
Query: 197 WNMRGVSRAKGSLLRFMKEE----IPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMG 252
WN ++R ++L ++EE I GV +P +Y M + FAWH ED DL+S+NYLH G
Sbjct: 150 WN---IARLN-TVLDVVEEECGISIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFG 205
Query: 253 ASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRL 312
K+WY +P E E + + G+ + A L K T+ISP V G+P ++
Sbjct: 206 EPKSWYAIPPEHGKRLERLAQ--GFFPSSSQGCD-AFLRHKMTLISPSVLKKYGIPFDKI 262
Query: 313 VQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAAI 357
Q AGEF++TFP YH GF+HGFNC E+ N AT W++ K A +
Sbjct: 263 TQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYGKVAKL 307
>RGD|1306378 [details] [associations]
symbol:Kdm4a "lysine (K)-specific demethylase 4A" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0005813 "centrosome" evidence=IEA;ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0014898 "cardiac
muscle hypertrophy in response to stress" evidence=ISO] [GO:0016577
"histone demethylation" evidence=ISO] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA;ISO] [GO:0035064 "methylated
histone residue binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0051864 "histone demethylase activity (H3-K36 specific)"
evidence=IEA;ISO] [GO:0070544 "histone H3-K36 demethylation"
evidence=ISO] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
RGD:1306378 GO:GO:0005737 GO:GO:0005813 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333
GeneTree:ENSGT00530000063342 GO:GO:0051864 CTD:9682 KO:K06709
OrthoDB:EOG4QRH37 EMBL:CH474008 IPI:IPI00949993
RefSeq:NP_001101436.1 UniGene:Rn.95937 Ensembl:ENSRNOT00000066165
GeneID:313539 KEGG:rno:313539 UCSC:RGD:1306378 NextBio:666373
Uniprot:D4A2N4
Length = 971
Score = 321 (118.1 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 67/165 (40%), Positives = 93/165 (56%)
Query: 197 WNMRGVSRAKGSLLRFMKEE----IPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMG 252
WN + R K ++L +++E I GV +P +Y M + FAWH ED DL+S+NYLH G
Sbjct: 57 WN---IGRLK-TILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFG 112
Query: 253 ASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRL 312
K+WY VP E E + + G + A L K T+ISP + G+P ++
Sbjct: 113 EPKSWYSVPPEHGKRLERLAKGFFPGSAQS---CEAFLRHKMTLISPLMLKKYGIPFDKV 169
Query: 313 VQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAAI 357
Q AGEF++TFP YH GF+HGFNC E+ N AT W+ K A +
Sbjct: 170 TQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAVL 214
>FB|FBgn0033233 [details] [associations]
symbol:Kdm4A "Histone demethylase 4A" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0016577 "histone demethylation" evidence=ISS] [GO:0051864
"histone demethylase activity (H3-K36 specific)"
evidence=ISS;IDA;IMP] [GO:0033169 "histone H3-K9 demethylation"
evidence=IMP] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=IMP] [GO:0070544 "histone H3-K36 demethylation"
evidence=IMP] [GO:0010628 "positive regulation of gene expression"
evidence=IMP] InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00558 EMBL:AE013599 GO:GO:0005634 GO:GO:0045892
GO:GO:0046872 GO:GO:0006351 GO:GO:0016702 GO:GO:0010628
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 eggNOG:NOG317950
GO:GO:0032454 EMBL:AY058636 RefSeq:NP_610331.1 UniGene:Dm.4139
ProteinModelPortal:Q9V333 SMR:Q9V333 MINT:MINT-800097 STRING:Q9V333
PaxDb:Q9V333 PRIDE:Q9V333 EnsemblMetazoa:FBtr0088886 GeneID:35744
KEGG:dme:Dmel_CG15835 UCSC:CG15835-RA CTD:9682 FlyBase:FBgn0033233
InParanoid:Q9V333 OMA:FASKRWI OrthoDB:EOG46T1GM PhylomeDB:Q9V333
GenomeRNAi:35744 NextBio:795007 Bgee:Q9V333 GermOnline:CG15835
Uniprot:Q9V333
Length = 495
Score = 302 (111.4 bits), Expect = 7.1e-27, Sum P(2) = 7.1e-27
Identities = 60/143 (41%), Positives = 80/143 (55%)
Query: 217 IPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHG 276
I GV + +Y M S FAWH ED DL+S+NYLH GA KTWY +P E++
Sbjct: 175 IDGVNTAYLYFGMWKSSFAWHTEDMDLYSINYLHFGAPKTWYAIPPAYGRRLEKLAN-ET 233
Query: 277 YGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFN 336
+ E + L K TMISP+V +P ++ Q AGE ++TFP YH GF+HGFN
Sbjct: 234 FSENYQECNAY--LRHKMTMISPKVLRQHNIPYNKITQEAGEIMITFPFGYHAGFNHGFN 291
Query: 337 CGEAANIATPEWLNIAKDAAIRR 359
E+ N A+ W+ K A+I R
Sbjct: 292 GAESTNFASKRWIEYGKRASICR 314
Score = 51 (23.0 bits), Expect = 7.1e-27, Sum P(2) = 7.1e-27
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 17 LPVAPEFHPTLAEFQDPIAYIFKIEKEASQY-GICKI 52
+P F P+ EFQ+ AYI IE + G+ KI
Sbjct: 15 VPRIMTFRPSYEEFQNFSAYIEYIESRGAHLAGLAKI 51
>ZFIN|ZDB-GENE-060503-664 [details] [associations]
symbol:kdm4b "lysine (K)-specific demethylase 4B"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 ZFIN:ZDB-GENE-060503-664
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
eggNOG:COG5141 SMART:SM00333 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 SMART:SM00545 GeneTree:ENSGT00530000063342
HOGENOM:HOG000231125 KO:K06709 HOVERGEN:HBG080483 CTD:23030
OrthoDB:EOG4N5VW5 EMBL:BX927276 OMA:QTEKEAP EMBL:BC171698
EMBL:BC171700 IPI:IPI00775179 RefSeq:NP_001076274.1
UniGene:Dr.81759 SMR:Q1LUQ0 Ensembl:ENSDART00000034084
Ensembl:ENSDART00000128161 GeneID:556504 KEGG:dre:556504
InParanoid:Q1LUQ0 NextBio:20881518 Uniprot:Q1LUQ0
Length = 1134
Score = 314 (115.6 bits), Expect = 9.9e-27, Sum P(2) = 9.9e-27
Identities = 65/164 (39%), Positives = 91/164 (55%)
Query: 197 WNMRGVSRAKGSLLRFMKEE----IPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMG 252
WN+ ++ +LL +++E I GV +P +Y M + FAWH ED DL+S+NYLH G
Sbjct: 229 WNIGHLN----TLLDMVEQECGIVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFG 284
Query: 253 ASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRL 312
K+WY +P E E + + G A L K T+ISP + +P R+
Sbjct: 285 KPKSWYAIPPEHGKRLERLAQGFFPGSSQG---CDAFLRHKMTLISPSILKKYSIPFDRI 341
Query: 313 VQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAA 356
Q GEF++TFP YH GF+HGFNC E+ N AT W++ K AA
Sbjct: 342 TQEEGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYGKMAA 385
Score = 49 (22.3 bits), Expect = 9.9e-27, Sum P(2) = 9.9e-27
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 23 FHPTLAEFQDPIAYIFKIEKEASQY-GICKI 52
F PT+ EF+D YI +E + + G+ K+
Sbjct: 98 FRPTMEEFKDFGKYIAYMETQGAHVAGLAKV 128
>UNIPROTKB|F1N9S1 [details] [associations]
symbol:F1N9S1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0032454 "histone demethylase activity (H3-K9
specific)" evidence=IEA] [GO:0050681 "androgen receptor binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
GO:GO:0046872 GO:GO:0008284 GO:GO:0008270 GO:GO:0006357
GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 SMART:SM00333
GeneTree:ENSGT00530000063342 GO:GO:0032454 OMA:DIIQGER
EMBL:AADN02066264 EMBL:AADN02066265 EMBL:AADN02066266
EMBL:AADN02066267 EMBL:AADN02066268 EMBL:AADN02066269
EMBL:AADN02066270 EMBL:AADN02066271 EMBL:AADN02066272
EMBL:AADN02066273 EMBL:AADN02066274 EMBL:AADN02066275
EMBL:AADN02066276 EMBL:AADN02066277 EMBL:AADN02066278
EMBL:AADN02066279 EMBL:AADN02066280 EMBL:AADN02066281
EMBL:AADN02066282 EMBL:AADN02066283 IPI:IPI00679881
Ensembl:ENSGALT00000032836 Uniprot:F1N9S1
Length = 998
Score = 318 (117.0 bits), Expect = 2.3e-26, P = 2.3e-26
Identities = 60/141 (42%), Positives = 83/141 (58%)
Query: 217 IPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHG 276
I GV +P +Y M + FAWH ED DL+S+NYLH G K+WY +P E E + + G
Sbjct: 114 IEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQ--G 171
Query: 277 YGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFN 336
+ + A L K T+ISP + G+P ++ Q AGEF++TFP YH GF+HGFN
Sbjct: 172 FFPSSSHGCN-AFLRHKMTLISPSILKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFN 230
Query: 337 CGEAANIATPEWLNIAKDAAI 357
C E+ N AT W++ K A +
Sbjct: 231 CAESTNFATIRWIDYGKAAKL 251
>ZFIN|ZDB-GENE-070209-38 [details] [associations]
symbol:zgc:153957 "zgc:153957" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 InterPro:IPR002999
ZFIN:ZDB-GENE-070209-38 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 SMART:SM00333
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 EMBL:CU468286 IPI:IPI00493629
Ensembl:ENSDART00000087729 ArrayExpress:F1QPD2 Bgee:F1QPD2
Uniprot:F1QPD2
Length = 1482
Score = 309 (113.8 bits), Expect = 7.6e-26, Sum P(2) = 7.6e-26
Identities = 65/181 (35%), Positives = 92/181 (50%)
Query: 197 WNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKT 256
WN+ ++ + I GV +P +Y M + F+WH ED DL+S+NYLH G K+
Sbjct: 150 WNIGHLNSVLDVIEEDCGVSIQGVNTPYLYFGMWKTSFSWHTEDMDLYSINYLHFGEPKS 209
Query: 257 WYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRLVQNA 316
WY +P E E + + + F L K T+ISP V +P ++ Q A
Sbjct: 210 WYAIPPEHGKRLERLA-IGFFPNSFKSCEAF--LRHKMTLISPSVLKKYSIPFDKITQEA 266
Query: 317 GEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAAIRRAS-----INYPPMVSHF 371
GEF++TFP YH GF+HGFNC E+ N A+ W++ K A S I+ P V F
Sbjct: 267 GEFMITFPYGYHAGFNHGFNCAESTNFASIRWIDYGKLATQCTCSKDMVKISMDPFVRRF 326
Query: 372 Q 372
Q
Sbjct: 327 Q 327
Score = 52 (23.4 bits), Expect = 7.6e-26, Sum P(2) = 7.6e-26
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 23 FHPTLAEFQDPIAYIFKIEKE-ASQYGICKI 52
F PT+ EF+D Y+ +E + A + G+ K+
Sbjct: 19 FRPTMEEFKDFNQYLVYMESQGAHRAGLAKV 49
>SGD|S000000971 [details] [associations]
symbol:RPH1 "JmjC domain-containing histone demethylase"
species:4932 "Saccharomyces cerevisiae" [GO:0001078 "RNA polymerase
II core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=IMP;IDA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IC] [GO:0043565
"sequence-specific DNA binding" evidence=IMP;IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0051864 "histone demethylase activity
(H3-K36 specific)" evidence=IMP;IDA] [GO:0032454 "histone
demethylase activity (H3-K9 specific)" evidence=IDA] [GO:0016577
"histone demethylation" evidence=IMP;IDA] Pfam:PF00096
InterPro:IPR003347 InterPro:IPR007087 InterPro:IPR013087
InterPro:IPR015880 Pfam:PF02373 PROSITE:PS00028 PROSITE:PS50157
PROSITE:PS51184 SMART:SM00355 SMART:SM00558 SGD:S000000971
GO:GO:0005634 GO:GO:0046872 GO:GO:0001078 GO:GO:0043565
GO:GO:0008270 EMBL:BK006939 eggNOG:COG5048 Gene3D:3.30.160.60
EMBL:U18922 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063342 HOGENOM:HOG000112726
OrthoDB:EOG4NGKW6 GO:GO:0051864 GO:GO:0032454 PIR:S50672
RefSeq:NP_011096.1 PDB:3OPT PDB:3OPW PDBsum:3OPT PDBsum:3OPW
ProteinModelPortal:P39956 SMR:P39956 DIP:DIP-5418N IntAct:P39956
MINT:MINT-518485 STRING:P39956 PaxDb:P39956 PeptideAtlas:P39956
EnsemblFungi:YER169W GeneID:856916 KEGG:sce:YER169W CYGD:YER169w
OMA:EFLRHKM EvolutionaryTrace:P39956 NextBio:983368
Genevestigator:P39956 GermOnline:YER169W Uniprot:P39956
Length = 796
Score = 293 (108.2 bits), Expect = 1.6e-25, Sum P(3) = 1.6e-25
Identities = 58/163 (35%), Positives = 90/163 (55%)
Query: 193 GETPWNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMG 252
G WN+ + ++L M+ ++PGV +Y + + F+WH ED DL+S+NY+H G
Sbjct: 195 GLNVWNVAKLP----NILDHMETKVPGVNDSYLYAGLWKASFSWHLEDQDLYSINYIHFG 250
Query: 253 ASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRL 312
A K WY +P E F + ++ + EE F L K + SP++ G+ C +
Sbjct: 251 APKQWYSIPQEDRFKFYKFMQEQ-FPEEAKNCPEF--LRHKMFLASPKLLQENGIRCNEI 307
Query: 313 VQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDA 355
V + GEF++T+P YH GF++G+N E+ N A EWL I K A
Sbjct: 308 VHHEGEFMITYPYGYHAGFNYGYNLAESVNFALEEWLPIGKKA 350
Score = 58 (25.5 bits), Expect = 1.6e-25, Sum P(3) = 1.6e-25
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 21 PEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P F PT +F+D AY I K + G+ K+
Sbjct: 15 PVFKPTYEQFEDFYAYCKAINKYGMKSGVVKV 46
Score = 47 (21.6 bits), Expect = 2.2e-24, Sum P(3) = 2.2e-24
Identities = 19/61 (31%), Positives = 25/61 (40%)
Query: 106 PVQKPVWQSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALEIESLYWKASVDKPFSV 165
PV KP ++ F++F K K Y K G K I WK +D P+S
Sbjct: 15 PVFKPTYEQ-----FEDFYAYCKAINK-YGMKSGVVKV------IPPKEWKDKLDLPYSA 62
Query: 166 E 166
E
Sbjct: 63 E 63
Score = 39 (18.8 bits), Expect = 1.6e-25, Sum P(3) = 1.6e-25
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 339 EAANIATPEWLNIAKDAAIRRASINYPPMVSHFQ 372
++ NI T LNI+++++ ++NY H Q
Sbjct: 574 KSPNIVT---LNISRESSRSPIALNYEARQQHSQ 604
>CGD|CAL0004209 [details] [associations]
symbol:orf19.2730 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 CGD:CAL0004209
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 EMBL:AACQ01000023
EMBL:AACQ01000025 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
eggNOG:NOG317950 RefSeq:XP_720249.1 RefSeq:XP_720480.1
ProteinModelPortal:Q5AF79 GeneID:3637861 GeneID:3638072
KEGG:cal:CaO19.10244 KEGG:cal:CaO19.2730 Uniprot:Q5AF79
Length = 606
Score = 284 (105.0 bits), Expect = 4.1e-25, Sum P(3) = 4.1e-25
Identities = 56/159 (35%), Positives = 83/159 (52%)
Query: 195 TPWNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGAS 254
T WN+ + +LL M+E++PGV +Y + + FAWH ED DL+S+NYLH GA
Sbjct: 184 TAWNVAHLP----NLLDLMEEKLPGVNQAYLYAGLWKALFAWHLEDQDLYSINYLHFGAP 239
Query: 255 KTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRLVQ 314
K WY +P F ++ V + +E F L KT M+SP G+ +
Sbjct: 240 KQWYSIPQSQHEEFYALM-VDLFHDEFKQCSEF--LRHKTFMVSPAYLEKHGIRVNHTIH 296
Query: 315 NAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAK 353
GEF++T+P YH GF++ +N E+ N A +W K
Sbjct: 297 REGEFIITYPYGYHAGFNYDYNLAESVNFALDDWFEFGK 335
Score = 51 (23.0 bits), Expect = 4.1e-25, Sum P(3) = 4.1e-25
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 21 PEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P F PT+ EF+D + I Q GI K+
Sbjct: 23 PVFQPTMHEFRDFYNFNKAINNYGMQSGIVKV 54
Score = 47 (21.6 bits), Expect = 4.1e-25, Sum P(3) = 4.1e-25
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 149 EIESLYWKA-SVDKPFSVEYANDMPGSAF 176
E+ES YW++ S +P Y D GS F
Sbjct: 154 ELESNYWRSLSYSEPM---YGADTMGSVF 179
>UNIPROTKB|Q5AF79 [details] [associations]
symbol:RPH2 "Potential jumonji-like transcriptional
repressor of PHR1" species:237561 "Candida albicans SC5314"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 CGD:CAL0004209 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 EMBL:AACQ01000023 EMBL:AACQ01000025
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 eggNOG:NOG317950
RefSeq:XP_720249.1 RefSeq:XP_720480.1 ProteinModelPortal:Q5AF79
GeneID:3637861 GeneID:3638072 KEGG:cal:CaO19.10244
KEGG:cal:CaO19.2730 Uniprot:Q5AF79
Length = 606
Score = 284 (105.0 bits), Expect = 4.1e-25, Sum P(3) = 4.1e-25
Identities = 56/159 (35%), Positives = 83/159 (52%)
Query: 195 TPWNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGAS 254
T WN+ + +LL M+E++PGV +Y + + FAWH ED DL+S+NYLH GA
Sbjct: 184 TAWNVAHLP----NLLDLMEEKLPGVNQAYLYAGLWKALFAWHLEDQDLYSINYLHFGAP 239
Query: 255 KTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRLVQ 314
K WY +P F ++ V + +E F L KT M+SP G+ +
Sbjct: 240 KQWYSIPQSQHEEFYALM-VDLFHDEFKQCSEF--LRHKTFMVSPAYLEKHGIRVNHTIH 296
Query: 315 NAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAK 353
GEF++T+P YH GF++ +N E+ N A +W K
Sbjct: 297 REGEFIITYPYGYHAGFNYDYNLAESVNFALDDWFEFGK 335
Score = 51 (23.0 bits), Expect = 4.1e-25, Sum P(3) = 4.1e-25
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 21 PEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P F PT+ EF+D + I Q GI K+
Sbjct: 23 PVFQPTMHEFRDFYNFNKAINNYGMQSGIVKV 54
Score = 47 (21.6 bits), Expect = 4.1e-25, Sum P(3) = 4.1e-25
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 149 EIESLYWKA-SVDKPFSVEYANDMPGSAF 176
E+ES YW++ S +P Y D GS F
Sbjct: 154 ELESNYWRSLSYSEPM---YGADTMGSVF 179
>ZFIN|ZDB-GENE-060503-246 [details] [associations]
symbol:jarid2b "jumonji, AT rich interactive domain
2b" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0032452 "histone demethylase activity"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0035097 "histone methyltransferase
complex" evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=ISS] [GO:0031061 "negative regulation of histone
methylation" evidence=ISS] [GO:0048863 "stem cell differentiation"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR001606 InterPro:IPR003347 InterPro:IPR004198
Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00558 ZFIN:ZDB-GENE-060503-246
GO:GO:0007275 GO:GO:0045892 GO:GO:0003677 GO:GO:0048863
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.150.60
SUPFAM:SSF46774 GO:GO:0051574 GO:GO:0035097 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 eggNOG:NOG327026 HOGENOM:HOG000013203
HOVERGEN:HBG052160 KO:K11478 OrthoDB:EOG4KKZ26 GO:GO:0031061
EMBL:BX842609 EMBL:BX890540 IPI:IPI00500491 RefSeq:NP_001189388.1
UniGene:Dr.108454 Ensembl:ENSDART00000147627 GeneID:558456
KEGG:dre:558456 CTD:558456 GeneTree:ENSGT00530000063118
InParanoid:Q1LVC2 OMA:CDESEIS NextBio:20882479 Bgee:Q1LVC2
Uniprot:Q1LVC2
Length = 1319
Score = 281 (104.0 bits), Expect = 1.8e-24, Sum P(2) = 1.8e-24
Identities = 82/241 (34%), Positives = 116/241 (48%)
Query: 147 ALEIESLYWKA--SVDKPFSVEYAN---DMPGSAFVPVRKIREAVGEGVTVGETPWNMRG 201
A E+E YW+ D +V Y + GS F PV K G WN+
Sbjct: 913 AAEVEQDYWRIVEQRDCHVAVHYGKVDTNTHGSGF-PVGKSEPFSKHG-------WNLTV 964
Query: 202 VSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVP 261
+ GS+LR + +PGVT P + I M+FS W + + L ++YLH GA WY +P
Sbjct: 965 LPNNSGSILRHLGA-VPGVTIPWLNIGMVFSTSCWSQDQNRLPYIDYLHTGADCIWYSIP 1023
Query: 262 MEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRLVQNAGEFVV 321
E ++VV H + N L EK MISPEV G+ R VQ +G+FVV
Sbjct: 1024 AEEKTKLDKVV--HTL-LQANGTPGLEML-EKNVMISPEVLCREGIKVHRTVQQSGQFVV 1079
Query: 322 TFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAA--IRRASINYPPMVSHFQLLYDLAI 379
FP A+ G++ E + ATP+W+N+ +AA ++ I P S +LLY +A
Sbjct: 1080 VFPGAFVSRVCCGYSVSETVHFATPQWMNLGYEAAKDLKCRRIAKP--FSMEKLLYQIAT 1137
Query: 380 A 380
A
Sbjct: 1138 A 1138
Score = 74 (31.1 bits), Expect = 1.8e-24, Sum P(2) = 1.8e-24
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 21 PEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P F P+ EFQDP+ Y+ ++ G+C++
Sbjct: 608 PIFKPSSREFQDPLVYLDSFREQVESCGLCRV 639
>ASPGD|ASPL0000057825 [details] [associations]
symbol:AN1060 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR017956 Pfam:PF02373 PROSITE:PS51184
SMART:SM00249 SMART:SM00384 SMART:SM00558 GO:GO:0005634
EMBL:BN001308 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0008168 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
EnsemblFungi:CADANIAT00001580 HOGENOM:HOG000206472 OMA:NIEKQRS
Uniprot:C8VTU6
Length = 1405
Score = 291 (107.5 bits), Expect = 2.3e-24, Sum P(3) = 2.3e-24
Identities = 58/162 (35%), Positives = 93/162 (57%)
Query: 195 TPWNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGAS 254
T WN+ + +LL + +++PGV + +Y+ M + FAWH ED DL+S+NY+H GA
Sbjct: 351 TSWNVAKLP----NLLDVIGQKVPGVNTAYLYLGMWKATFAWHLEDVDLYSINYIHFGAP 406
Query: 255 KTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGA-GVPCCRLV 313
K WY + E A FE+ ++ + + F L KT ++SP + G+ ++V
Sbjct: 407 KQWYSISQEDAPRFEQAMKSI-WPSDAKTCDQF--LRHKTYLVSPSLLKSQYGITVNKMV 463
Query: 314 QNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDA 355
GEFV+T+P YH G++ G+NC E+ N AT +WL+ + A
Sbjct: 464 HYEGEFVITYPYGYHSGYNLGYNCAESVNFATEKWLDYGRVA 505
Score = 59 (25.8 bits), Expect = 2.3e-24, Sum P(3) = 2.3e-24
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 149 EIESLYWKASV-DKPFSVEYANDMPGSAF 176
E+E+ YWK+ + + P Y DMPGS F
Sbjct: 321 ELETAYWKSLMFNNPM---YGADMPGSLF 346
Score = 41 (19.5 bits), Expect = 2.3e-24, Sum P(3) = 2.3e-24
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 25 PTLAEFQDPIAYIFKIEKEASQYGICKI 52
P F+D ++I +I+K + G+ K+
Sbjct: 81 PVFKPFRDFQSFIKRIDKYGMRSGVVKV 108
>CGD|CAL0004229 [details] [associations]
symbol:orf19.2743 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016577 "histone demethylation" evidence=IEA] [GO:0051864
"histone demethylase activity (H3-K36 specific)" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0032454 "histone demethylase activity (H3-K9 specific)"
evidence=IEA] [GO:0001078 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IEA]
InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184
SMART:SM00249 SMART:SM00558 CGD:CAL0004229 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 EMBL:AACQ01000023 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 RefSeq:XP_720493.1
ProteinModelPortal:Q5AFV0 GeneID:3637916 KEGG:cal:CaO19.2743
Uniprot:Q5AFV0
Length = 606
Score = 283 (104.7 bits), Expect = 4.5e-24, Sum P(2) = 4.5e-24
Identities = 56/159 (35%), Positives = 83/159 (52%)
Query: 195 TPWNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGAS 254
T WN+ + +LL M+E++PGV +Y + + FAWH ED DL+S+NYLH GA
Sbjct: 184 TAWNVAHLP----NLLDLMEEKLPGVNQAYLYAGLWKASFAWHLEDQDLYSINYLHFGAP 239
Query: 255 KTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRLVQ 314
K WY +P F ++ V + +E F L KT M+SP G+ +
Sbjct: 240 KQWYSIPQSQHEEFYALM-VDLFHDEFKQCSEF--LRHKTFMVSPAYLEKHGIRVNHTIH 296
Query: 315 NAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAK 353
GEF++T+P YH GF++ +N E+ N A +W K
Sbjct: 297 REGEFIITYPYGYHAGFNYDYNLAESVNFALDDWFEFGK 335
Score = 56 (24.8 bits), Expect = 4.5e-24, Sum P(2) = 4.5e-24
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 21 PEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P F PT+ EF+D + I K Q GI K+
Sbjct: 23 PVFQPTMHEFRDFYNFNKAINKYGMQSGIVKV 54
>UNIPROTKB|Q5AFV0 [details] [associations]
symbol:RPH1 "Potential jumonji-like transcriptional
repressor of PHR1" species:237561 "Candida albicans SC5314"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 CGD:CAL0004229 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 EMBL:AACQ01000023 InterPro:IPR003349 PROSITE:PS51183
Pfam:PF02375 RefSeq:XP_720493.1 ProteinModelPortal:Q5AFV0
GeneID:3637916 KEGG:cal:CaO19.2743 Uniprot:Q5AFV0
Length = 606
Score = 283 (104.7 bits), Expect = 4.5e-24, Sum P(2) = 4.5e-24
Identities = 56/159 (35%), Positives = 83/159 (52%)
Query: 195 TPWNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGAS 254
T WN+ + +LL M+E++PGV +Y + + FAWH ED DL+S+NYLH GA
Sbjct: 184 TAWNVAHLP----NLLDLMEEKLPGVNQAYLYAGLWKASFAWHLEDQDLYSINYLHFGAP 239
Query: 255 KTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRLVQ 314
K WY +P F ++ V + +E F L KT M+SP G+ +
Sbjct: 240 KQWYSIPQSQHEEFYALM-VDLFHDEFKQCSEF--LRHKTFMVSPAYLEKHGIRVNHTIH 296
Query: 315 NAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAK 353
GEF++T+P YH GF++ +N E+ N A +W K
Sbjct: 297 REGEFIITYPYGYHAGFNYDYNLAESVNFALDDWFEFGK 335
Score = 56 (24.8 bits), Expect = 4.5e-24, Sum P(2) = 4.5e-24
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 21 PEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P F PT+ EF+D + I K Q GI K+
Sbjct: 23 PVFQPTMHEFRDFYNFNKAINKYGMQSGIVKV 54
>MGI|MGI:104813 [details] [associations]
symbol:Jarid2 "jumonji, AT rich interactive domain 2"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0001889 "liver development" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IDA;TAS] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0031061 "negative regulation of histone methylation"
evidence=IDA] [GO:0032452 "histone demethylase activity"
evidence=IDA] [GO:0035097 "histone methyltransferase complex"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0048536 "spleen development" evidence=IMP]
[GO:0048538 "thymus development" evidence=IMP] [GO:0048863 "stem
cell differentiation" evidence=IMP] [GO:0051574 "positive
regulation of histone H3-K9 methylation" evidence=IDA]
InterPro:IPR001606 InterPro:IPR003347 InterPro:IPR004198
Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00501 SMART:SM00558 MGI:MGI:104813
GO:GO:0008285 GO:GO:0003677 GO:GO:0048863 GO:GO:0001889
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 GO:GO:0000122
GO:GO:0048536 GO:GO:0048538 Gene3D:1.10.150.60 SUPFAM:SSF46774
EMBL:CH466546 GO:GO:0051574 GO:GO:0035097 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 CTD:3720
eggNOG:NOG327026 HOGENOM:HOG000013203 HOVERGEN:HBG052160 KO:K11478
OrthoDB:EOG4KKZ26 GO:GO:0031061 GeneTree:ENSGT00530000063118
OMA:QRLACIK EMBL:D31967 EMBL:AK045214 EMBL:AK147226 EMBL:AK164134
EMBL:BC003374 EMBL:BC052444 EMBL:BC060695 IPI:IPI00124575
IPI:IPI00955365 PIR:T30254 RefSeq:NP_001191972.1
RefSeq:NP_001191973.1 RefSeq:NP_068678.1 UniGene:Mm.25059 PDB:2RQ5
PDBsum:2RQ5 ProteinModelPortal:Q62315 SMR:Q62315 DIP:DIP-34312N
IntAct:Q62315 MINT:MINT-4792531 STRING:Q62315 PhosphoSite:Q62315
PRIDE:Q62315 Ensembl:ENSMUST00000044608 Ensembl:ENSMUST00000173246
Ensembl:ENSMUST00000173704 GeneID:16468 KEGG:mmu:16468
UCSC:uc007qgr.1 UCSC:uc007qgv.1 InParanoid:Q3TPU4 ChiTaRS:JARID2
EvolutionaryTrace:Q62315 NextBio:289745 Bgee:Q62315
CleanEx:MM_JARID2 Genevestigator:Q62315
GermOnline:ENSMUSG00000038518 Uniprot:Q62315
Length = 1234
Score = 273 (101.2 bits), Expect = 7.0e-24, Sum P(2) = 7.0e-24
Identities = 82/256 (32%), Positives = 120/256 (46%)
Query: 132 KSYLKKCGNKKAALSALEIESLYWKASVDKPFSV-----EYANDMPGSAFVPVRKIREAV 186
++ + C +K+ A + EIE YW+ +K V + + GS F PV K
Sbjct: 828 RNIMNMCFSKEPAPA--EIEQEYWRLVEEKDCHVAVHCGKVDTNTHGSGF-PVGKSEPFS 884
Query: 187 GEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSL 246
G WN+ + GS+LR + +PGVT P + I M+FS W + + L +
Sbjct: 885 RHG-------WNLTVLPNNTGSILRHLGA-VPGVTIPWLNIGMVFSTSCWSRDQNHLPYI 936
Query: 247 NYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAG 306
+YLH GA WY +P E N E+VV G L E MISPEV G
Sbjct: 937 DYLHTGADCIWYCIPAEEENKLEDVVHTLLQGNGTPGLQML----ESNVMISPEVLCKKG 992
Query: 307 VPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAA--IRRASINY 364
+ R VQ +G+FVV FP ++ G+N E + AT +W ++ + A ++R I
Sbjct: 993 IKVHRTVQQSGQFVVCFPGSFVSKVCCGYNVSETVHFATTQWTSMGFETAKEMKRRHIAK 1052
Query: 365 PPMVSHFQLLYDLAIA 380
P S +LLY +A A
Sbjct: 1053 P--FSMEKLLYQIAQA 1066
Score = 77 (32.2 bits), Expect = 7.0e-24, Sum P(2) = 7.0e-24
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 21 PEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P+ EF DP+ YI + + +YG+C++
Sbjct: 556 PVLRPSAKEFHDPLIYIESVRAQVEKYGMCRV 587
>UNIPROTKB|F5GYH2 [details] [associations]
symbol:KDM4C "Lysine-specific demethylase 4C" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL354707 EMBL:AL137020
EMBL:AL161443 EMBL:AL445592 EMBL:AL513412 HGNC:HGNC:17071
ChiTaRS:KDM4C IPI:IPI01018984 ProteinModelPortal:F5GYH2 SMR:F5GYH2
Ensembl:ENST00000536108 ArrayExpress:F5GYH2 Bgee:F5GYH2
Uniprot:F5GYH2
Length = 629
Score = 293 (108.2 bits), Expect = 2.0e-23, P = 2.0e-23
Identities = 55/124 (44%), Positives = 74/124 (59%)
Query: 234 FAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEK 293
FAWH ED DL+S+NYLH G K+WY +P E E + + G+ + A L K
Sbjct: 6 FAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQ--GFFPSSSQGCD-AFLRHK 62
Query: 294 TTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAK 353
T+ISP V G+P ++ Q AGEF++TFP YH GF+HGFNC E+ N AT W++ K
Sbjct: 63 MTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYGK 122
Query: 354 DAAI 357
A +
Sbjct: 123 VAKL 126
>SGD|S000003880 [details] [associations]
symbol:JHD2 "JmjC domain family histone demethylase specific
for H3-K4" species:4932 "Saccharomyces cerevisiae" [GO:0032453
"histone demethylase activity (H3-K4 specific)" evidence=IDA;IMP]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0016577 "histone demethylation" evidence=IDA;IMP] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 SGD:S000003880
GO:GO:0005634 GO:GO:0005737 EMBL:BK006943 GO:GO:0046872
GO:GO:0008270 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GeneTree:ENSGT00530000063118
EMBL:Z49619 EMBL:Z49620 PIR:S57142 RefSeq:NP_012653.1
ProteinModelPortal:P47156 SMR:P47156 DIP:DIP-4835N IntAct:P47156
MINT:MINT-537060 STRING:P47156 PaxDb:P47156 EnsemblFungi:YJR119C
GeneID:853583 KEGG:sce:YJR119C CYGD:YJR119c HOGENOM:HOG000113131
OMA:RNISGMT OrthoDB:EOG44N21B NextBio:974376 Genevestigator:P47156
GermOnline:YJR119C GO:GO:0032453 Uniprot:P47156
Length = 728
Score = 279 (103.3 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
Identities = 77/252 (30%), Positives = 116/252 (46%)
Query: 118 YTFQEFETKAKNFEKSYLKKCGNKKAALSALEIESLYWKASVDKPFS----VEYA----N 169
Y+ EF+ K + S L +K LS E+E ++W S V+Y N
Sbjct: 298 YSLPEFQEYCKR-QNSRLLPA--RK--LSIDELEEMFWSLVTKNRRSSLTTVKYGADIHN 352
Query: 170 DMPGSA-------FVPVRKIREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTS 222
++PG F+P + + + + + P N+ + A SLL K I G+T
Sbjct: 353 ELPGQITGFPTREFIPKNINGDELIDYLKYCDHPMNLTNLPMAHNSLLPLFKRNISGMTI 412
Query: 223 PMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEIN 282
P +YI LFS F WH ED S NY H G K WY +P F +++ +++
Sbjct: 413 PWIYIGSLFSTFCWHMEDQYTLSANYQHEGDPKVWYSIPESGCTKFNDLLN------DMS 466
Query: 283 PLVTFAT---LGEKTTMISP--EVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNC 337
P + L + T+ISP F +G+P + VQ E+++TFP+ YH GF+ G+N
Sbjct: 467 PDLFIKQPDLLHQLVTLISPYDPNFKKSGIPVYKAVQKPNEYIITFPKCYHAGFNTGYNF 526
Query: 338 GEAANIATPEWL 349
EA N WL
Sbjct: 527 NEAVNFTIDFWL 538
Score = 58 (25.5 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 21 PEFHPTLAEFQDPIAYIFK--IEKEASQYGICKI 52
P +PT EF++PI Y+ I++ +YG+ K+
Sbjct: 5 PALYPTEQEFKNPIDYLSNPHIKRLGVRYGMVKV 38
>UNIPROTKB|F1RUJ7 [details] [associations]
symbol:JARID2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051574 "positive regulation of histone H3-K9
methylation" evidence=IEA] [GO:0048863 "stem cell differentiation"
evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
[GO:0048536 "spleen development" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0031061 "negative regulation
of histone methylation" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001606
InterPro:IPR003347 InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501
SMART:SM00558 GO:GO:0008285 GO:GO:0003677 GO:GO:0048863
GO:GO:0001889 GO:GO:0003682 GO:GO:0000122 GO:GO:0048536
GO:GO:0048538 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GO:GO:0031061 GeneTree:ENSGT00530000063118
OMA:QRLACIK EMBL:CT841540 EMBL:CT737348 Ensembl:ENSSSCT00000001155
Uniprot:F1RUJ7
Length = 1232
Score = 267 (99.0 bits), Expect = 3.0e-23, Sum P(2) = 3.0e-23
Identities = 83/256 (32%), Positives = 122/256 (47%)
Query: 132 KSYLKKCGNKKAALSALEIESLYWKASVDKPFSV-----EYANDMPGSAFVPVRKIREAV 186
++ + C +K+ A + EIE YW+ +K V + + GS F PV K
Sbjct: 824 RNIMNMCFSKEPAPA--EIEQEYWRLVEEKDCHVAVHCGKVDTNTHGSGF-PVGKSEPFS 880
Query: 187 GEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSL 246
G WN+ + GS+LR + +PGVT P + I M+FS W + + L +
Sbjct: 881 RHG-------WNLTVLPNNTGSILRHLGA-VPGVTIPWLNIGMVFSTSCWSRDQNHLPYI 932
Query: 247 NYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAG 306
+YLH GA WY +P E N E+VV H + N L E MISPEV G
Sbjct: 933 DYLHTGADCIWYCIPAEEENKLEDVV--HTL-LQANGTPGLQML-ESNVMISPEVLCREG 988
Query: 307 VPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAA--IRRASINY 364
V R VQ +G+FVV FP ++ G++ E + AT +W ++ + A ++R I
Sbjct: 989 VKVHRAVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSMGFETAKEMKRRHIAK 1048
Query: 365 PPMVSHFQLLYDLAIA 380
P S +LLY +A A
Sbjct: 1049 P--FSMEKLLYQIAQA 1062
Score = 78 (32.5 bits), Expect = 3.0e-23, Sum P(2) = 3.0e-23
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 21 PEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P+ EF DP+ YI + + +YG+C++
Sbjct: 552 PVLRPSAKEFHDPLVYIESVRPQVEKYGMCRV 583
>UNIPROTKB|E7EV17 [details] [associations]
symbol:KDM4C "Lysine-specific demethylase 4C" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001965
InterPro:IPR003347 Pfam:PF02373 PROSITE:PS51184 SMART:SM00249
SMART:SM00558 InterPro:IPR002999 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 SMART:SM00333
EMBL:AL354707 EMBL:AL137020 EMBL:AL161443 EMBL:AL445592
EMBL:AL513412 HGNC:HGNC:17071 ChiTaRS:KDM4C IPI:IPI00910024
ProteinModelPortal:E7EV17 SMR:E7EV17 Ensembl:ENST00000442236
UCSC:uc011lmk.2 ArrayExpress:E7EV17 Bgee:E7EV17 Uniprot:E7EV17
Length = 801
Score = 293 (108.2 bits), Expect = 3.4e-23, P = 3.4e-23
Identities = 55/124 (44%), Positives = 74/124 (59%)
Query: 234 FAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEK 293
FAWH ED DL+S+NYLH G K+WY +P E E + + G+ + A L K
Sbjct: 6 FAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAQ--GFFPSSSQGCD-AFLRHK 62
Query: 294 TTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAK 353
T+ISP V G+P ++ Q AGEF++TFP YH GF+HGFNC E+ N AT W++ K
Sbjct: 63 MTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWIDYGK 122
Query: 354 DAAI 357
A +
Sbjct: 123 VAKL 126
>UNIPROTKB|F1P6D5 [details] [associations]
symbol:JARID2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051574 "positive regulation of histone H3-K9
methylation" evidence=IEA] [GO:0048863 "stem cell differentiation"
evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
[GO:0048536 "spleen development" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0031061 "negative regulation
of histone methylation" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001606
InterPro:IPR003347 InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501
SMART:SM00558 GO:GO:0008285 GO:GO:0003677 GO:GO:0048863
GO:GO:0001889 GO:GO:0003682 GO:GO:0000122 GO:GO:0048536
GO:GO:0048538 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GO:GO:0031061 GeneTree:ENSGT00530000063118
EMBL:AAEX03017561 EMBL:AAEX03017558 EMBL:AAEX03017559
EMBL:AAEX03017560 Ensembl:ENSCAFT00000015718 Uniprot:F1P6D5
Length = 1249
Score = 266 (98.7 bits), Expect = 4.1e-23, Sum P(2) = 4.1e-23
Identities = 82/256 (32%), Positives = 122/256 (47%)
Query: 132 KSYLKKCGNKKAALSALEIESLYWKASVDKPFSV-----EYANDMPGSAFVPVRKIREAV 186
++ + C +K+ A + EIE YW+ +K V + + GS F PV K
Sbjct: 833 RNIMNMCFSKEPAPA--EIEQEYWRLVEEKDCHVAVHCGKVDTNTHGSGF-PVGKSEPFS 889
Query: 187 GEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSL 246
G WN+ + GS+LR + +PGVT P + I M+FS W + + L +
Sbjct: 890 RHG-------WNLTVLPNNTGSILRHLGA-VPGVTIPWLNIGMVFSTSCWSRDQNHLPYI 941
Query: 247 NYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAG 306
+YLH GA WY +P E N E+VV H + N L E MISPEV G
Sbjct: 942 DYLHTGADCIWYCIPAEEENKLEDVV--HTL-LQANGTPGLQML-ESNVMISPEVLCKEG 997
Query: 307 VPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAA--IRRASINY 364
+ R VQ +G+FVV FP ++ G++ E + AT +W ++ + A ++R I
Sbjct: 998 IKVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSMGFETAKEMKRRHIAK 1057
Query: 365 PPMVSHFQLLYDLAIA 380
P S +LLY +A A
Sbjct: 1058 P--FSMEKLLYQIAQA 1071
Score = 78 (32.5 bits), Expect = 4.1e-23, Sum P(2) = 4.1e-23
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 21 PEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P+ EF DP+ YI + + +YG+C++
Sbjct: 561 PVLRPSAKEFHDPLVYIESVRAQVEKYGMCRV 592
>UNIPROTKB|J9NWC2 [details] [associations]
symbol:JARID2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:QRLACIK EMBL:AAEX03017561
EMBL:AAEX03017558 EMBL:AAEX03017559 EMBL:AAEX03017560
Ensembl:ENSCAFT00000043518 Uniprot:J9NWC2
Length = 1259
Score = 266 (98.7 bits), Expect = 4.2e-23, Sum P(2) = 4.2e-23
Identities = 82/256 (32%), Positives = 122/256 (47%)
Query: 132 KSYLKKCGNKKAALSALEIESLYWKASVDKPFSV-----EYANDMPGSAFVPVRKIREAV 186
++ + C +K+ A + EIE YW+ +K V + + GS F PV K
Sbjct: 843 RNIMNMCFSKEPAPA--EIEQEYWRLVEEKDCHVAVHCGKVDTNTHGSGF-PVGKSEPFS 899
Query: 187 GEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSL 246
G WN+ + GS+LR + +PGVT P + I M+FS W + + L +
Sbjct: 900 RHG-------WNLTVLPNNTGSILRHLGA-VPGVTIPWLNIGMVFSTSCWSRDQNHLPYI 951
Query: 247 NYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAG 306
+YLH GA WY +P E N E+VV H + N L E MISPEV G
Sbjct: 952 DYLHTGADCIWYCIPAEEENKLEDVV--HTL-LQANGTPGLQML-ESNVMISPEVLCKEG 1007
Query: 307 VPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAA--IRRASINY 364
+ R VQ +G+FVV FP ++ G++ E + AT +W ++ + A ++R I
Sbjct: 1008 IKVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSMGFETAKEMKRRHIAK 1067
Query: 365 PPMVSHFQLLYDLAIA 380
P S +LLY +A A
Sbjct: 1068 P--FSMEKLLYQIAQA 1081
Score = 78 (32.5 bits), Expect = 4.2e-23, Sum P(2) = 4.2e-23
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 21 PEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P+ EF DP+ YI + + +YG+C++
Sbjct: 571 PVLRPSAKEFHDPLVYIESVRAQVEKYGMCRV 602
>UNIPROTKB|Q92833 [details] [associations]
symbol:JARID2 "Protein Jumonji" species:9606 "Homo sapiens"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001889 "liver
development" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
[GO:0048538 "thymus development" evidence=IEA] [GO:0051574
"positive regulation of histone H3-K9 methylation" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0031061 "negative regulation of histone
methylation" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=IDA] [GO:0032452 "histone demethylase activity"
evidence=ISS] [GO:0048863 "stem cell differentiation" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0003682 "chromatin
binding" evidence=ISS] [GO:0007417 "central nervous system
development" evidence=TAS] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
GO:GO:0045892 GO:GO:0008285 GO:GO:0003677 GO:GO:0048863
GO:GO:0007417 GO:GO:0001889 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 GO:GO:0000122 GO:GO:0048536 GO:GO:0048538
EMBL:CH471087 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 CTD:3720 eggNOG:NOG327026 HOGENOM:HOG000013203
HOVERGEN:HBG052160 KO:K11478 OrthoDB:EOG4KKZ26 GO:GO:0031061
EMBL:U57592 EMBL:AK292861 EMBL:AK299349 EMBL:AK303610 EMBL:AL136162
EMBL:AL021938 EMBL:BC046184 EMBL:BC046246 IPI:IPI00023756
IPI:IPI00871836 IPI:IPI00955447 RefSeq:NP_001253969.1
RefSeq:NP_004964.2 UniGene:Hs.269059 ProteinModelPortal:Q92833
SMR:Q92833 DIP:DIP-45494N IntAct:Q92833 STRING:Q92833
PhosphoSite:Q92833 DMDM:61252601 PaxDb:Q92833 PRIDE:Q92833
Ensembl:ENST00000341776 Ensembl:ENST00000397311 GeneID:3720
KEGG:hsa:3720 UCSC:uc003nbj.3 GeneCards:GC06P015246 HGNC:HGNC:6196
HPA:HPA044909 MIM:601594 neXtProt:NX_Q92833 PharmGKB:PA29995
InParanoid:Q92833 OMA:QRLACIK GenomeRNAi:3720 NextBio:14577
ArrayExpress:Q92833 Bgee:Q92833 CleanEx:HS_JARID2
Genevestigator:Q92833 GermOnline:ENSG00000008083 Uniprot:Q92833
Length = 1246
Score = 266 (98.7 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 82/256 (32%), Positives = 122/256 (47%)
Query: 132 KSYLKKCGNKKAALSALEIESLYWKASVDKPFSV-----EYANDMPGSAFVPVRKIREAV 186
++ + C +K+ A + EIE YW+ +K V + + GS F PV K
Sbjct: 830 RNIMSMCFSKEPAPA--EIEQEYWRLVEEKDCHVAVHCGKVDTNTHGSGF-PVGKSEPFS 886
Query: 187 GEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSL 246
G WN+ + GS+LR + +PGVT P + I M+FS W + + L +
Sbjct: 887 RHG-------WNLTVLPNNTGSILRHLGA-VPGVTIPWLNIGMVFSTSCWSRDQNHLPYI 938
Query: 247 NYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAG 306
+YLH GA WY +P E N E+VV H + N L E MISPEV G
Sbjct: 939 DYLHTGADCIWYCIPAEEENKLEDVV--HTL-LQANGTPGLQML-ESNVMISPEVLCKEG 994
Query: 307 VPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAA--IRRASINY 364
+ R VQ +G+FVV FP ++ G++ E + AT +W ++ + A ++R I
Sbjct: 995 IKVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSMGFETAKEMKRRHIAK 1054
Query: 365 PPMVSHFQLLYDLAIA 380
P S +LLY +A A
Sbjct: 1055 P--FSMEKLLYQIAQA 1068
Score = 73 (30.8 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 21 PEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P+ EF DP+ YI + + ++G+C++
Sbjct: 558 PVLRPSAKEFHDPLIYIESVRAQVEKFGMCRV 589
>UNIPROTKB|F1MH56 [details] [associations]
symbol:JARID2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051574 "positive regulation of histone H3-K9
methylation" evidence=IEA] [GO:0048863 "stem cell differentiation"
evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
[GO:0048536 "spleen development" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] [GO:0031061 "negative regulation
of histone methylation" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001606
InterPro:IPR003347 InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501
SMART:SM00558 GO:GO:0008285 GO:GO:0003677 GO:GO:0048863
GO:GO:0001889 GO:GO:0003682 GO:GO:0000122 GO:GO:0048536
GO:GO:0048538 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GO:GO:0031061 GeneTree:ENSGT00530000063118
OMA:QRLACIK EMBL:DAAA02055659 EMBL:DAAA02055660 EMBL:DAAA02055661
EMBL:DAAA02055662 IPI:IPI00689067 ProteinModelPortal:F1MH56
Ensembl:ENSBTAT00000017189 NextBio:20874777 Uniprot:F1MH56
Length = 1248
Score = 261 (96.9 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 81/256 (31%), Positives = 122/256 (47%)
Query: 132 KSYLKKCGNKKAALSALEIESLYWKASVDKPFSV-----EYANDMPGSAFVPVRKIREAV 186
++ + C +K+ A + EIE YW+ +K V + + GS F PV K
Sbjct: 842 RNIMNMCFSKEPAPA--EIEQEYWRLVEEKDCHVAVHCGKVDTNTHGSGF-PVGKSEPFS 898
Query: 187 GEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSL 246
G WN+ + GS+LR + +PGVT P + I M+FS W + + L +
Sbjct: 899 RHG-------WNLTVLPNNTGSILRHLGA-VPGVTIPWLNIGMVFSTSCWSRDQNHLPYI 950
Query: 247 NYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAG 306
+YLH GA WY +P E + E+VV H + N L E MISPEV G
Sbjct: 951 DYLHTGADCIWYCIPAEEEHKLEDVV--HTL-LQANGTPGLQML-ESNVMISPEVLCREG 1006
Query: 307 VPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAA--IRRASINY 364
+ R VQ +G+FVV FP ++ G++ E + AT +W ++ + A ++R I
Sbjct: 1007 IKVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSMGFETAKEMKRRHIAK 1066
Query: 365 PPMVSHFQLLYDLAIA 380
P S +LLY +A A
Sbjct: 1067 P--FSMEKLLYQIAQA 1080
Score = 78 (32.5 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 21 PEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P+ EF DP+ YI + + +YG+C++
Sbjct: 570 PVLRPSAKEFHDPLVYIESVRPQVEKYGMCRV 601
>TAIR|locus:2064910 [details] [associations]
symbol:AT2G38950 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0006487 "protein N-linked
glycosylation" evidence=RCA] [GO:0043687 "post-translational
protein modification" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR003347 InterPro:IPR004198 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51184 SMART:SM00558 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003700 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 HOGENOM:HOG000241335
KO:K11446 EMBL:AY127026 EMBL:BT001088 IPI:IPI00539605
RefSeq:NP_181429.2 UniGene:At.37227 ProteinModelPortal:Q8L7T6
SMR:Q8L7T6 PRIDE:Q8L7T6 EnsemblPlants:AT2G38950.1 GeneID:818480
KEGG:ath:AT2G38950 TAIR:At2g38950 eggNOG:NOG308887
InParanoid:Q8L7T6 OMA:FDCGFNC PhylomeDB:Q8L7T6
ProtClustDB:CLSN2918209 Genevestigator:Q8L7T6 Uniprot:Q8L7T6
Length = 708
Score = 241 (89.9 bits), Expect = 4.5e-22, Sum P(2) = 4.5e-22
Identities = 79/284 (27%), Positives = 132/284 (46%)
Query: 113 QSGEYYTFQEFETKAKNFEKSYL----KKCGNKKAA-------LSALEIESLYWKASVDK 161
+ G YT + F+ A ++KS+ + G++ ++ L +IE Y + V+
Sbjct: 201 ERGPGYTLKSFKNFADTYKKSHFGMKDEVLGSENSSPSLKPNELIVADIEKEY-RQIVES 259
Query: 162 PF---SVEYANDMPGSAFVPVRKIREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIP 218
P V Y ND+ + F + A E + WN+ ++ GSLL E+
Sbjct: 260 PLIEIGVLYGNDLDTATFGSGFPL-SAPSESSKYS-SGWNLNSTAKLPGSLLSL--EDCE 315
Query: 219 GVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVR---VH 275
V P + + M S W +E L+SL YLH+GA + WY V + F+ ++ +
Sbjct: 316 SVCVPRLSVGMCLSSQFWKSEKERLYSLCYLHVGAPRVWYSVAGCHRSKFKAAMKSFILE 375
Query: 276 GYGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGF 335
GE+ P + M+SP G+P R VQ+ G++V+ FP +Y+ F GF
Sbjct: 376 MSGEQ--PKKSH----NPVMMMSPYQLSVEGIPVTRCVQHPGQYVIIFPGSYYSAFDCGF 429
Query: 336 NCGEAANIATPEWLNIAKDAAIR-RASINYPPMVSHFQLLYDLA 378
NC E AN A +WL D A++ ++ ++S+ +LL+ A
Sbjct: 430 NCLEKANFAPLDWLPHG-DIAVQVNQEMSKTSLISYDKLLFSAA 472
Score = 89 (36.4 bits), Expect = 4.5e-22, Sum P(2) = 4.5e-22
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 15 KTLPVAPEFHPTLAEFQDPIAYIFKIEKEASQYGIC 50
K L AP F+PT EF+D ++YI + A YGIC
Sbjct: 103 KVLEEAPVFNPTEEEFRDTLSYISSLRDRAEPYGIC 138
>UNIPROTKB|F1NWZ0 [details] [associations]
symbol:JARID2 "Protein Jumonji" species:9031 "Gallus
gallus" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001889 "liver
development" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0031061
"negative regulation of histone methylation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0048536 "spleen
development" evidence=IEA] [GO:0048538 "thymus development"
evidence=IEA] [GO:0048863 "stem cell differentiation" evidence=IEA]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=IEA] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
GO:GO:0008285 GO:GO:0003677 GO:GO:0048863 GO:GO:0003682
GO:GO:0000122 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0051574
GO:GO:0035097 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 IPI:IPI00597467 GO:GO:0031061
GeneTree:ENSGT00530000063118 OMA:QRLACIK EMBL:AADN02027529
EMBL:AADN02027521 EMBL:AADN02027522 EMBL:AADN02027523
EMBL:AADN02027524 EMBL:AADN02027525 EMBL:AADN02027526
EMBL:AADN02027527 EMBL:AADN02027528 Ensembl:ENSGALT00000020740
Uniprot:F1NWZ0
Length = 1220
Score = 250 (93.1 bits), Expect = 4.9e-21, Sum P(2) = 4.9e-21
Identities = 77/256 (30%), Positives = 118/256 (46%)
Query: 132 KSYLKKCGNKKAALSALEIESLYWKASVDKPFSV-----EYANDMPGSAFVPVRKIREAV 186
++ + C K+ ++ E+E YW+ K V + + GS F PV K
Sbjct: 806 RNIMNMCFTKEPTVA--EVEQEYWRLVEQKDSHVAVHCGKVDTNTHGSGF-PVGKSEPFS 862
Query: 187 GEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSL 246
G WN+ + GS+LR + +PGVT P + I M+FS W + + L +
Sbjct: 863 RHG-------WNLTVLPNNTGSILRHLGA-VPGVTIPWLNIGMVFSTSCWSRDQNHLPYI 914
Query: 247 NYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAG 306
+YLH GA WY +P N ++VV H + N L E MISPE+ G
Sbjct: 915 DYLHTGADCIWYCIPAAEENKLDDVV--HTL-LQANGTPGLEML-ESNVMISPEILCKEG 970
Query: 307 VPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAA--IRRASINY 364
+ R VQ +G+FVV FP ++ G++ E + AT +W ++ A ++R I
Sbjct: 971 IRVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSMGFKTAKEMKRRRIAK 1030
Query: 365 PPMVSHFQLLYDLAIA 380
P S +LLY +A A
Sbjct: 1031 P--FSMEKLLYQIATA 1044
Score = 76 (31.8 bits), Expect = 4.9e-21, Sum P(2) = 4.9e-21
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 21 PEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P+ EF DP+ YI + + +YG+C++
Sbjct: 534 PILRPSTKEFHDPLIYIESVRAQVEKYGMCRV 565
>UNIPROTKB|Q5F363 [details] [associations]
symbol:JARID2 "Protein Jumonji" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0003682 "chromatin
binding" evidence=ISS] [GO:0051574 "positive regulation of histone
H3-K9 methylation" evidence=ISS] [GO:0031061 "negative regulation
of histone methylation" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0032452 "histone demethylase activity"
evidence=ISS] [GO:0048863 "stem cell differentiation" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
GO:GO:0007275 GO:GO:0045892 GO:GO:0003677 GO:GO:0048863
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.150.60
SUPFAM:SSF46774 GO:GO:0051574 GO:GO:0035097 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:AJ851787
IPI:IPI00597467 RefSeq:NP_001012880.1 UniGene:Gga.12117
ProteinModelPortal:Q5F363 STRING:Q5F363 GeneID:420839
KEGG:gga:420839 CTD:3720 eggNOG:NOG327026 HOGENOM:HOG000013203
HOVERGEN:HBG052160 InParanoid:Q5F363 KO:K11478 OrthoDB:EOG4KKZ26
NextBio:20823696 GO:GO:0031061 Uniprot:Q5F363
Length = 1233
Score = 250 (93.1 bits), Expect = 5.1e-21, Sum P(2) = 5.1e-21
Identities = 77/256 (30%), Positives = 118/256 (46%)
Query: 132 KSYLKKCGNKKAALSALEIESLYWKASVDKPFSV-----EYANDMPGSAFVPVRKIREAV 186
++ + C K+ ++ E+E YW+ K V + + GS F PV K
Sbjct: 819 RNIMNMCFTKEPTVA--EVEQEYWRLVEQKDSHVAVHCGKVDTNTHGSGF-PVGKSEPFS 875
Query: 187 GEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSL 246
G WN+ + GS+LR + +PGVT P + I M+FS W + + L +
Sbjct: 876 RHG-------WNLTVLPNNTGSILRHLGA-VPGVTIPWLNIGMVFSTSCWSRDQNHLPYI 927
Query: 247 NYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAG 306
+YLH GA WY +P N ++VV H + N L E MISPE+ G
Sbjct: 928 DYLHTGADCIWYCIPAAEENKLDDVV--HTL-LQANGTPGLEML-ESNVMISPEILCKEG 983
Query: 307 VPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAA--IRRASINY 364
+ R VQ +G+FVV FP ++ G++ E + AT +W ++ A ++R I
Sbjct: 984 IRVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSMGFKTAKEMKRRRIAK 1043
Query: 365 PPMVSHFQLLYDLAIA 380
P S +LLY +A A
Sbjct: 1044 P--FSMEKLLYQIATA 1057
Score = 76 (31.8 bits), Expect = 5.1e-21, Sum P(2) = 5.1e-21
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 21 PEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P+ EF DP+ YI + + +YG+C++
Sbjct: 547 PILRPSTKEFHDPLIYIESVRAQVEKYGMCRV 578
>ZFIN|ZDB-GENE-061218-1 [details] [associations]
symbol:jarid2a "jumonji, AT rich interactive domain
2a" species:7955 "Danio rerio" [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001606 InterPro:IPR003347
InterPro:IPR004198 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501 SMART:SM00558
ZFIN:ZDB-GENE-061218-1 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 GeneTree:ENSGT00530000063118
EMBL:CR391941 IPI:IPI00799170 Ensembl:ENSDART00000086333
Bgee:E7F6J7 Uniprot:E7F6J7
Length = 1171
Score = 257 (95.5 bits), Expect = 2.4e-20, Sum P(3) = 2.4e-20
Identities = 83/287 (28%), Positives = 132/287 (45%)
Query: 115 GEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALEIESLYWKASVDKPFSVEYANDMPGS 174
G+ ++ F A+N + C +K+ E+E YW+ VD+ S + G
Sbjct: 754 GKSFSLTTFFRAARNT----MNMCFSKEP--DTAEVEKEYWRL-VDEKES--HVAVHCGR 804
Query: 175 AFVPVRKIREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWF 234
VG+ + WN+ +S GS+LR + +PGVT P + I M+FS
Sbjct: 805 VDTKTHGSGFPVGKSEPFSKHGWNLNVLSNNSGSILRHLGA-VPGVTIPWLNIGMVFSTS 863
Query: 235 AWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKT 294
W + + L ++YLH GA WY +P E + ++VV H + N L E+
Sbjct: 864 CWCRDQNSLPYIDYLHTGADCIWYCIPAEEKSKLDKVV--HTL-LQANGTPGLEML-ERN 919
Query: 295 TMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKD 354
MISPEV GV R VQ++G+F+V FP + G++ E + A +W+ + +
Sbjct: 920 IMISPEVLRRKGVKVYRTVQHSGQFMVCFPGTFVAKVCCGYSVSETMHFANLQWMKLGYE 979
Query: 355 AA--IRRASINYPPMVSHFQLLYDLAIAMHSS--IPVAVSAKPRSSR 397
AA ++R I P S +LLY + + + AVS+ R R
Sbjct: 980 AAKDLKRRRIEEP--FSTEKLLYQITTCERDNKQLMTAVSSLFRDLR 1024
Score = 58 (25.5 bits), Expect = 2.4e-20, Sum P(3) = 2.4e-20
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 21 PEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P F+P EF DP+ ++ +A +G+ ++
Sbjct: 503 PVFYPNTHEFHDPLTFMELARGQAEAFGLFRV 534
Score = 43 (20.2 bits), Expect = 2.4e-20, Sum P(3) = 2.4e-20
Identities = 13/51 (25%), Positives = 24/51 (47%)
Query: 96 QIGFCPRKPRPVQKPVWQSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALS 146
Q+ C K V + +SG +E + AK+ + L+K G ++ +S
Sbjct: 695 QLPRCEPKNGLVNGALHRSGAREHLRELDPTAKSTRQKRLEKRGEEEGMIS 745
>CGD|CAL0001611 [details] [associations]
symbol:orf19.2476 species:5476 "Candida albicans" [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0070211 "Snt2C complex" evidence=IEA] [GO:0000812
"Swr1 complex" evidence=IEA] [GO:0031934 "mating-type region
heterochromatin" evidence=IEA] [GO:0048189 "Lid2 complex"
evidence=IEA] [GO:0031618 "nuclear centromeric heterochromatin"
evidence=IEA] [GO:0034630 "RITS complex localization" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0031505 "fungal-type cell wall organization"
evidence=IEA] [GO:0043486 "histone exchange" evidence=IEA]
[GO:0016573 "histone acetylation" evidence=IEA] [GO:0051567
"histone H3-K9 methylation" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0007126
"meiosis" evidence=IEA] [GO:0031507 "heterochromatin assembly"
evidence=IEA] [GO:0051572 "negative regulation of histone H3-K4
methylation" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 CGD:CAL0001611 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 EMBL:AACQ01000041 InterPro:IPR003349
PROSITE:PS51183 eggNOG:NOG327026 RefSeq:XP_718497.1
ProteinModelPortal:Q5AA08 GeneID:3639891 KEGG:cal:CaO19.2476
Uniprot:Q5AA08
Length = 1684
Score = 144 (55.7 bits), Expect = 6.2e-12, Sum P(3) = 6.2e-12
Identities = 31/84 (36%), Positives = 45/84 (53%)
Query: 296 MISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDA 355
MI+PE+ G+ +Q GE ++ FP+ + S GFN E N+AT WLN A ++
Sbjct: 752 MITPELLDSFGIRYTTTIQEPGECIIKFPKTFSSTISFGFNLSEEVNLATKSWLNYALES 811
Query: 356 AIRRASINYPPMVSHFQLLYDLAI 379
A N P S F+LL +LA+
Sbjct: 812 EKWLAKQNIIPGFSTFKLLVNLAL 835
Score = 100 (40.3 bits), Expect = 6.2e-12, Sum P(3) = 6.2e-12
Identities = 23/80 (28%), Positives = 37/80 (46%)
Query: 196 PWNMRGVSRAKGSLLRFM-KEEIPG--VTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMG 252
PWN+ + +LL + K ++ + + I M FS W EDH + +N+ G
Sbjct: 593 PWNLHNLPILPNALLGALDKTDVNDYDLNESRINIGMTFSTENWTCEDHFTNLINFQFFG 652
Query: 253 ASKTWYGVPMEAANAFEEVV 272
A K WY +P FE ++
Sbjct: 653 AVKKWYFIPESEFEKFERLL 672
Score = 51 (23.0 bits), Expect = 6.2e-12, Sum P(3) = 6.2e-12
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 21 PEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P F T + +DPIA+I + +YG K+
Sbjct: 110 PCFSLTPEQTKDPIAFIESVMDVGKEYGAVKV 141
>UNIPROTKB|G4NIH1 [details] [associations]
symbol:MGG_09841 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 EMBL:CM001236
RefSeq:XP_003720398.1 EnsemblFungi:MGG_09841T0 GeneID:2680840
KEGG:mgr:MGG_09841 Uniprot:G4NIH1
Length = 419
Score = 187 (70.9 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 59/190 (31%), Positives = 80/190 (42%)
Query: 217 IPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHG 276
IPG+ P Y + F WH ED L SLN+L G K W+ +P A EEV R
Sbjct: 216 IPGLCYPYKYEGTALAPFTWHVEDVGLISLNHLFQGV-KVWFCIPRADRLAAEEVFRSAP 274
Query: 277 YGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFN 336
+ T+ AGV +VQ AGE V T P AYH GFS G+
Sbjct: 275 MTATAAIPHHEQFMRHNATLDGHAALRRAGVRVVPVVQRAGEIVATLPEAYHSGFSAGYT 334
Query: 337 CGEAANIATPEWLNIAKDAAIRRASINYPPMVSHFQLLYDLAIAMHSSIPVAVSAKPRSS 396
EA N A L + +D A + + PM +HF A +H ++
Sbjct: 335 VCEAVNFADRP-LRVGEDRAWCTLACSPCPM-NHFTFRRRSA-EVHVETGEGLNGAELDG 391
Query: 397 RLKDKNKDEG 406
R + ++ D+G
Sbjct: 392 RKRARSGDDG 401
>UNIPROTKB|I3LQ64 [details] [associations]
symbol:KDM4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 Ensembl:ENSSSCT00000031638
Uniprot:I3LQ64
Length = 911
Score = 177 (67.4 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 39/98 (39%), Positives = 53/98 (54%)
Query: 225 VYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPL 284
+Y M + FAWH ED DL+S+NYLH G K+WY VP E E + + G +
Sbjct: 162 LYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLESLAKGFFPGSAQS-- 219
Query: 285 VTFATLGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVT 322
A L K T+ISP + G+P ++ Q AGEF+ T
Sbjct: 220 -CEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMFT 256
Score = 53 (23.7 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 23 FHPTLAEFQDPIAYIFKIEKE-ASQYGICKI 52
F+PT+ EF++ YI IE + A + G+ K+
Sbjct: 17 FYPTVEEFRNFSRYIAYIESQGAHRAGLAKV 47
>UNIPROTKB|I3LVJ1 [details] [associations]
symbol:KDM4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051864 "histone demethylase activity (H3-K36
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347 Pfam:PF02373
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 GO:GO:0005737
GO:GO:0005813 GO:GO:0045892 GO:GO:0005730 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063342 GO:GO:0051864 OMA:KRTAGCC
Ensembl:ENSSSCT00000026209 Uniprot:I3LVJ1
Length = 916
Score = 177 (67.4 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 39/98 (39%), Positives = 53/98 (54%)
Query: 225 VYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPL 284
+Y M + FAWH ED DL+S+NYLH G K+WY VP E E + + G +
Sbjct: 162 LYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLESLAKGFFPGSAQS-- 219
Query: 285 VTFATLGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVT 322
A L K T+ISP + G+P ++ Q AGEF+ T
Sbjct: 220 -CEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMFT 256
Score = 53 (23.7 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 23 FHPTLAEFQDPIAYIFKIEKE-ASQYGICKI 52
F+PT+ EF++ YI IE + A + G+ K+
Sbjct: 17 FYPTVEEFRNFSRYIAYIESQGAHRAGLAKV 47
>POMBASE|SPAC343.11c [details] [associations]
symbol:msc1 "multi-copy suppressor of Chk1" species:4896
"Schizosaccharomyces pombe" [GO:0000118 "histone deacetylase
complex" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0000812 "Swr1 complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IPI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISM] [GO:0006974 "response to DNA damage
stimulus" evidence=IGI] [GO:0007126 "meiosis" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IMP] [GO:0016577 "histone demethylation"
evidence=ISM] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] [GO:0019787 "small
conjugating protein ligase activity" evidence=ISM] [GO:0032452
"histone demethylase activity" evidence=ISM] [GO:0043486 "histone
exchange" evidence=IPI] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 PomBase:SPAC343.11c
GO:GO:0007126 EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0016573 GO:GO:0006974
GO:GO:0016706 GO:GO:0000812 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0019787 GO:GO:0000118 OrthoDB:EOG4Z39NV
InterPro:IPR003349 PROSITE:PS51183 SMART:SM00545 eggNOG:NOG327026
GO:GO:0032452 PIR:T38660 RefSeq:NP_593431.1
ProteinModelPortal:Q9UT79 STRING:Q9UT79 EnsemblFungi:SPAC343.11c.1
GeneID:2541710 KEGG:spo:SPAC343.11c NextBio:20802802 Uniprot:Q9UT79
Length = 1588
Score = 181 (68.8 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 68/288 (23%), Positives = 114/288 (39%)
Query: 125 TKAKNFEKSYLKKCGNKKAALSALE-IESLYW------KASVDKPFSVEYANDMPGSAFV 177
T K FE + L+ L +E+ +W AS PFS Y +P
Sbjct: 409 TSGKGFETKISINLDSDIKLLNTLSPLETFFWCCSFPSTASTSSPFSY-YPESLPTPLLG 467
Query: 178 -PVRKIREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAW 236
V PWN+ + +K S LRF PG+ + + + + W
Sbjct: 468 RAVNTTAFPTSRQNAYYNDPWNLYFIHFSKLSPLRFTP---PGILTSTISLGQPLTCQGW 524
Query: 237 HAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVR--VHGYGEEINPLVTFATLGEKT 294
+ L ++Y H GA + WY +P +E+++ + +E P TL +
Sbjct: 525 QRDSMSLFGMHYHHYGAQRIWYVIPEVDGPKYEKLLNDLSPSFIQE-KP----ETLIKSK 579
Query: 295 TMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNI--A 352
++ + + G+ VQN+ EFV+T P Y+ GF+ E+ AT EW+ A
Sbjct: 580 ILLPISMLISNGIQVLTFVQNSNEFVITSPNTYYTVLDTGFSLSESVPFATKEWIQDMHA 639
Query: 353 KDA--AIRRASINYPPMVSHFQLLY-DLAIAMHSSIPVAVSAKPRSSR 397
+++ + I+ P + H L L +HS+ + K R R
Sbjct: 640 ENSFNMYKNLHISAPFSLDHILLANATLDKTVHSAYWLMTCLKDRVDR 687
>SGD|S000002503 [details] [associations]
symbol:GIS1 "Histone demethylase and transcription factor"
species:4932 "Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0071071 "regulation of phospholipid biosynthetic
process" evidence=IMP] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=IC] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0060275 "maintenance of stationary phase
in response to starvation" evidence=IMP] [GO:0001300 "chronological
cell aging" evidence=IMP] [GO:0000978 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP;IDA] [GO:0001078 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in negative
regulation of transcription" evidence=IDA;IMP] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0016577 "histone
demethylation" evidence=IMP] [GO:0051864 "histone demethylase
activity (H3-K36 specific)" evidence=IMP] InterPro:IPR003347
InterPro:IPR007087 InterPro:IPR013087 InterPro:IPR015880
Pfam:PF02373 PROSITE:PS00028 PROSITE:PS50157 PROSITE:PS51184
SMART:SM00355 SMART:SM00558 SGD:S000002503 GO:GO:0005739
GO:GO:0005634 GO:GO:0046872 GO:GO:0001078 GO:GO:0008270
EMBL:BK006938 GO:GO:0001300 GO:GO:0000978 GO:GO:0001077
eggNOG:COG5048 Gene3D:3.30.160.60 EMBL:Z47746 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 PIR:S51245
RefSeq:NP_010381.1 ProteinModelPortal:Q03833 SMR:Q03833
IntAct:Q03833 MINT:MINT-4480789 STRING:Q03833 PaxDb:Q03833
PeptideAtlas:Q03833 EnsemblFungi:YDR096W GeneID:851670
KEGG:sce:YDR096W CYGD:YDR096w GeneTree:ENSGT00530000063342
HOGENOM:HOG000112726 OrthoDB:EOG4NGKW6 NextBio:969289
Genevestigator:Q03833 GermOnline:YDR096W GO:GO:0051864
GO:GO:0060275 GO:GO:0071071 Uniprot:Q03833
Length = 894
Score = 165 (63.1 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 34/108 (31%), Positives = 57/108 (52%)
Query: 234 FAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEIN-PLVTFATLGE 292
F WH ++ + S+NYLH GA K WY +P + F +++ + N P A +
Sbjct: 201 FPWHLDEQNKCSINYLHFGAPKQWYSIPSANTDQFLKILSKEPSSNKENCP----AFIRH 256
Query: 293 KTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEA 340
+ + SP+ + R+VQ EF++TFP + GF++G+N GE+
Sbjct: 257 QNIITSPDFLRKNNIKFNRVVQFQHEFIITFPYCMYSGFNYGYNFGES 304
Score = 48 (22.0 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 9 DILPWLKTLPVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
+I P ++ + P F P++ EF + +I +I K + GI K+
Sbjct: 2 EIKP-VEVIDGVPVFKPSMMEFANFQYFIDEITKFGIENGIVKV 44
>POMBASE|SPBP19A11.06 [details] [associations]
symbol:lid2 "Lid2 complex subunit, predicted histone
demethylase Lid2" species:4896 "Schizosaccharomyces pombe"
[GO:0000070 "mitotic sister chromatid segregation" evidence=IMP]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0019787 "small conjugating protein ligase
activity" evidence=ISM] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0031507 "heterochromatin
assembly" evidence=IMP] [GO:0031618 "nuclear centromeric
heterochromatin" evidence=IDA] [GO:0031934 "mating-type region
heterochromatin" evidence=IDA] [GO:0034630 "RITS complex
localization" evidence=IMP] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=IDA] [GO:0048189
"Lid2 complex" evidence=IDA] [GO:0051567 "histone H3-K9
methylation" evidence=IMP] [GO:0051572 "negative regulation of
histone H3-K4 methylation" evidence=IMP] InterPro:IPR001841
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51011 PROSITE:PS51184
SMART:SM00184 SMART:SM00249 SMART:SM00558 PomBase:SPBP19A11.06
Prosite:PS00518 GO:GO:0046872 GO:GO:0003677 EMBL:CU329671
GO:GO:0008270 GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0030466
GO:GO:0030702 GO:GO:0000070 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0031934 GO:GO:0051567
Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0048189 GO:GO:0019787
GO:GO:0031507 GO:GO:0051572 GO:GO:0031618 PROSITE:PS51183
GO:GO:0034630 eggNOG:NOG327026 GO:GO:0034647 OrthoDB:EOG44N21B
KO:K11446 PIR:T50313 RefSeq:NP_596174.1 ProteinModelPortal:Q9HDV4
IntAct:Q9HDV4 STRING:Q9HDV4 EnsemblFungi:SPBP19A11.06.1
GeneID:2541299 KEGG:spo:SPBP19A11.06 OMA:LPCVIRE NextBio:20802409
Uniprot:Q9HDV4
Length = 1513
Score = 177 (67.4 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 59/267 (22%), Positives = 104/267 (38%)
Query: 124 ETKAKNFEKSYLKKCGNKKAALSALEIESLYWKASVDK-----PFSVEYANDMPGSAFVP 178
E A+ F + +K L+ +IE YW + + P +E + S
Sbjct: 337 ERSAEIFNTLGERNSSSKLTNLTEDDIELFYWSSLAESNSGFAPLELEGLSQAYTSTIQS 396
Query: 179 VRKIREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHA 238
+E E PWN+ + L + ++ +T + I M+F W
Sbjct: 397 SLPSKEVFPLEKYSSE-PWNLHNLPFENPCLFNYSFSDLSSLTITRLSIGMVFYTHGWTK 455
Query: 239 EDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKT---T 295
L++ G + TWY +P + ++AFE + + Y P T L
Sbjct: 456 SSLSTGLLHHHRFGDTVTWYVLPPDESDAFERYL-ISSY-----PQYTMEDLNRSNGLPV 509
Query: 296 MISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLN--IAK 353
++SP + G + EF+V P +YHMGF GF+ E+ N AT W+ +
Sbjct: 510 IVSPSSLIENGFHPIAIDLRPNEFLVVSPNSYHMGFHQGFSSFESVNFATVNWIKDGLLN 569
Query: 354 DAAIRRASINYPPMVSHFQLLYDLAIA 380
+ S+ P VS+ ++ + ++
Sbjct: 570 SSISVLKSMRIPSSVSYEAVIISMVLS 596
Score = 37 (18.1 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 14/45 (31%), Positives = 19/45 (42%)
Query: 422 NELLHVLGQGSPIVLLPQSSSGALGANPWIPLGLCSYREAIKSSG 466
N L +LGQ V S+S +L P P+ S + S G
Sbjct: 1042 NAPLEILGQHLDYVEKRNSASLSLNDRPGPPMEPASRETSPDSEG 1086
>UNIPROTKB|G4MMV6 [details] [associations]
symbol:MGG_02045 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR003347
Pfam:PF02373 PROSITE:PS51184 SMART:SM00558 EMBL:CM001231
RefSeq:XP_003708798.1 EnsemblFungi:MGG_02045T0 GeneID:2681322
KEGG:mgr:MGG_02045 Uniprot:G4MMV6
Length = 1104
Score = 161 (61.7 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 42/132 (31%), Positives = 60/132 (45%)
Query: 217 IPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWY----GVPMEAANAFEEVV 272
IPG+ +P Y F+ FAWH ED +L ++NYLH G K W+ G +A F+E +
Sbjct: 656 IPGLHTPTCYRGTPFAPFAWHHEDFELGAINYLHYG-QKIWFVTHPGFFDKATATFQEAL 714
Query: 273 RVHGYGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFS 332
+ + L + + +P +Q AG+ VV +PRAYH GF
Sbjct: 715 NIDQDHSQF--------LRHEAVHGGVQYLRNKDIPTIGFMQEAGQIVVVYPRAYHSGFG 766
Query: 333 HGFNCGEAANIA 344
EA N A
Sbjct: 767 ATATVAEAVNYA 778
>SGD|S000004788 [details] [associations]
symbol:ECM5 "Non-essential protein of unknown function"
species:4932 "Saccharomyces cerevisiae" [GO:0070211 "Snt2C complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
SGD:S000004788 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
EMBL:BK006946 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 EMBL:Z49808 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 PIR:S55123
RefSeq:NP_013901.1 ProteinModelPortal:Q03214 SMR:Q03214
DIP:DIP-6678N IntAct:Q03214 MINT:MINT-631320 STRING:Q03214
PaxDb:Q03214 PeptideAtlas:Q03214 PRIDE:Q03214 EnsemblFungi:YMR176W
GeneID:855214 KEGG:sce:YMR176W CYGD:YMR176w eggNOG:KOG1246
OrthoDB:EOG4Z39NV NextBio:978720 Genevestigator:Q03214
GermOnline:YMR176W GO:GO:0070211 InterPro:IPR003349 PROSITE:PS51183
Uniprot:Q03214
Length = 1411
Score = 114 (45.2 bits), Expect = 1.1e-07, Sum P(4) = 1.1e-07
Identities = 41/169 (24%), Positives = 68/169 (40%)
Query: 110 PVWQSGEYY--TFQEFETKAKNFEKSYLKKCGNKKAALSALEIESLYWKASVDK--PFSV 165
PV+ +YY + F F SY K L E E LY+ + F +
Sbjct: 393 PVYNLRQYYEKSLAVFTAIVAKFGSSYPDLFA-KHTTLPQKEFERLYFHLLSEHFIDFEI 451
Query: 166 EYANDMPGSAFVPVRKIREAVGEGVTVGET--PWNMRGVSRAKGSLLRFMKEEIPGVTSP 223
+ +P S P + E + WN+ + + SLL+ + ++ T
Sbjct: 452 DTGLGLPCSMRSPGNN---SSNEKFAIKNILDQWNLDNIPLNELSLLQHLDLDMANFTRT 508
Query: 224 MVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVV 272
I MLFS W DH L S+++ H+G++K Y + + FE ++
Sbjct: 509 TYDIGMLFSCQGWSVSDHFLPSIDFNHLGSTKLVYSIAPKDMEKFEALI 557
Score = 97 (39.2 bits), Expect = 1.1e-07, Sum P(4) = 1.1e-07
Identities = 25/98 (25%), Positives = 46/98 (46%)
Query: 291 GEKTTMI-SPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWL 349
G ++ I P + G+ + Q G ++ FP+A+ GF + A A WL
Sbjct: 625 GSQSDFIFEPNFILANGIKLYKTTQEQGSYIFKFPKAFTCSIGSGFYLSQNAKFAPSSWL 684
Query: 350 NIAKDAAIRRASINYPPMVSHFQLLYDLAIAMHSSIPV 387
+ +AA + + + P + QLL + A+ ++S+ PV
Sbjct: 685 RFSSEAAKWTSKMGFLPGLDVNQLLIN-AL-LNSNNPV 720
Score = 45 (20.9 bits), Expect = 1.1e-07, Sum P(4) = 1.1e-07
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 19 VAPEFHPT--LA--EFQDPIAYIFKIEKEASQYGICKI 52
++P PT LA E DPI + +E S YG K+
Sbjct: 113 ISPHSIPTFILAKKELPDPIKFYELVEDLGSVYGCVKL 150
Score = 37 (18.1 bits), Expect = 1.1e-07, Sum P(4) = 1.1e-07
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 421 NNELLHVLGQGSPIVLLPQSSSGA-LGANPWIPLGLCSYRE 460
N L ++ + I +LP L ++ +IPL CS R+
Sbjct: 1197 NQHLDQIMQKNKFIEILPSIFRCLDLKSDKYIPLESCSKRQ 1237
>UNIPROTKB|F5H590 [details] [associations]
symbol:JARID2 "Protein Jumonji" species:9606 "Homo sapiens"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001606 InterPro:IPR003347 Pfam:PF01388
Pfam:PF02373 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00501
SMART:SM00558 GO:GO:0003677 GO:GO:0005622 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:AL136162 EMBL:AL021938 HGNC:HGNC:6196
IPI:IPI01018952 ProteinModelPortal:F5H590 SMR:F5H590 PRIDE:F5H590
Ensembl:ENST00000541660 UCSC:uc011diu.1 ArrayExpress:F5H590
Bgee:F5H590 Uniprot:F5H590
Length = 960
Score = 123 (48.4 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 39/127 (30%), Positives = 60/127 (47%)
Query: 132 KSYLKKCGNKKAALSALEIESLYWKASVDKPFSV-----EYANDMPGSAFVPVRKIREAV 186
++ + C +K+ A + EIE YW+ +K V + + GS F PV K
Sbjct: 792 RNIMSMCFSKEPAPA--EIEQEYWRLVEEKDCHVAVHCGKVDTNTHGSGF-PVGKSEPFS 848
Query: 187 GEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSL 246
G WN+ + GS+LR + +PGVT P + I M+FS W + + L +
Sbjct: 849 RHG-------WNLTVLPNNTGSILRHLGA-VPGVTIPWLNIGMVFSTSCWSRDQNHLPYI 900
Query: 247 NYLHMGA 253
+YLH GA
Sbjct: 901 DYLHTGA 907
Score = 73 (30.8 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 21 PEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P+ EF DP+ YI + + ++G+C++
Sbjct: 520 PVLRPSAKEFHDPLIYIESVRAQVEKFGMCRV 551
>UNIPROTKB|C9JGA3 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 PROSITE:PS50016
PROSITE:PS51011 SMART:SM00249 SMART:SM00501 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:AC010889 HGNC:HGNC:11115 ChiTaRS:KDM5D
IPI:IPI00644852 ProteinModelPortal:C9JGA3 SMR:C9JGA3 STRING:C9JGA3
Ensembl:ENST00000447300 HOGENOM:HOG000174636 ArrayExpress:C9JGA3
Bgee:C9JGA3 Uniprot:C9JGA3
Length = 425
Score = 102 (41.0 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 20/35 (57%), Positives = 23/35 (65%)
Query: 18 PVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKI 52
P P F P+ AEFQDP+ YI KI A + GICKI
Sbjct: 12 PECPVFEPSWAEFQDPLGYIAKIRPIAEKSGICKI 46
Score = 67 (28.6 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 24/95 (25%), Positives = 44/95 (46%)
Query: 113 QSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALE-IESLYWK--ASVDKPFSVEYAN 169
Q+ + Y+ Q F A +F+ Y N + E +E +W+ +S+++ +VEY
Sbjct: 332 QATQEYSLQSFGEMADSFKSDYF----NMPVHMVPTELVEKEFWRLVSSIEEDVTVEYGA 387
Query: 170 DMP----GSAFVPVRKIREAVG-EGVTVGETPWNM 199
D+ GS F PV ++ + E + WN+
Sbjct: 388 DIHSKEFGSGF-PVSNSKQNLSPEEKEYATSGWNL 421
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.410 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 466 441 0.00089 118 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 117
No. of states in DFA: 622 (66 KB)
Total size of DFA: 286 KB (2149 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.19u 0.13s 33.32t Elapsed: 00:00:02
Total cpu time: 33.21u 0.13s 33.34t Elapsed: 00:00:02
Start: Sat May 11 09:02:12 2013 End: Sat May 11 09:02:14 2013
WARNINGS ISSUED: 1