Query 039624
Match_columns 466
No_of_seqs 280 out of 693
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 19:56:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039624.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039624hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dxt_A JMJC domain-containing 100.0 3.5E-88 1.2E-92 685.1 14.0 312 16-375 14-326 (354)
2 2ox0_A JMJC domain-containing 100.0 5.3E-88 1.8E-92 691.6 15.3 311 18-376 34-345 (381)
3 3opt_A DNA damage-responsive t 100.0 2.7E-85 9.3E-90 667.1 12.4 312 18-360 12-355 (373)
4 4ask_A Lysine-specific demethy 100.0 5.2E-47 1.8E-51 396.8 18.8 170 205-385 219-390 (510)
5 3avr_A Lysine-specific demethy 100.0 8.1E-47 2.8E-51 400.9 20.2 176 195-382 229-412 (531)
6 2xxz_A Lysine-specific demethy 100.0 1.4E-45 4.7E-50 372.1 9.8 151 198-360 173-328 (332)
7 2ypd_A Probable JMJC domain-co 97.8 3.6E-05 1.2E-09 78.9 8.6 98 255-354 234-337 (392)
8 3pua_A GRC5, PHD finger protei 97.7 0.00023 7.8E-09 73.6 12.1 137 224-381 177-318 (392)
9 3k3o_A PHF8, PHD finger protei 97.7 0.00019 6.5E-09 73.7 11.1 137 224-381 150-291 (371)
10 3kv4_A PHD finger protein 8; e 97.7 0.00048 1.6E-08 72.4 14.2 137 224-381 234-375 (447)
11 3kv9_A JMJC domain-containing 97.6 0.00028 9.6E-09 73.0 11.7 137 224-381 178-319 (397)
12 3kv5_D JMJC domain-containing 97.6 0.0004 1.4E-08 73.8 12.1 138 223-381 268-410 (488)
13 2yu1_A JMJC domain-containing 97.4 0.001 3.4E-08 70.0 12.9 138 224-382 199-341 (451)
14 3k2o_A Bifunctional arginine d 97.2 0.00036 1.2E-08 70.8 6.3 123 222-352 173-298 (336)
15 4gjz_A Lysine-specific demethy 97.1 0.00032 1.1E-08 65.5 4.6 108 222-343 125-234 (235)
16 3pur_A Lysine-specific demethy 97.0 0.0022 7.6E-08 68.3 10.1 111 223-354 298-410 (528)
17 3d8c_A Hypoxia-inducible facto 95.7 0.021 7.3E-07 57.8 7.9 113 220-343 182-295 (349)
18 3al5_A HTYW5, JMJC domain-cont 94.0 0.041 1.4E-06 55.4 4.5 110 221-347 167-277 (338)
19 1vrb_A Putative asparaginyl hy 84.1 5.2 0.00018 40.1 10.4 117 223-356 143-264 (342)
20 4diq_A Lysine-specific demethy 69.1 14 0.00047 39.1 8.7 107 222-354 165-275 (489)
21 2xdv_A MYC-induced nuclear ant 38.4 73 0.0025 33.0 7.9 105 220-354 138-247 (442)
22 2b8m_A Hypothetical protein MJ 24.1 36 0.0012 27.3 2.2 38 313-350 69-108 (117)
No 1
>3dxt_A JMJC domain-containing histone demethylation PROT; JMJD2D, histone demethylase, H3K9, jumonji domain-CONT protein 2D, oxidoreductase; 1.80A {Homo sapiens} PDB: 3dxu_A* 4hon_A* 4hoo_A 2w2i_A*
Probab=100.00 E-value=3.5e-88 Score=685.15 Aligned_cols=312 Identities=34% Similarity=0.497 Sum_probs=263.8
Q ss_pred CCCCCceecCChhhcCChHHHHHHHHh-hhcccCeeeecCCCCCCCcchhhHHHHHHHHHHhhhcCCCCCCCCCccccee
Q 039624 16 TLPVAPEFHPTLAEFQDPIAYIFKIEK-EASQYGICKIVPPVPPPPKKTAITFLNRSLAQRAAATGGATSSSGPTFTTRQ 94 (466)
Q Consensus 16 ~~p~~pvf~PT~eEF~dp~~yi~~i~~-~a~~~GI~KIvPP~~w~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~F~tR~ 94 (466)
.-..+||||||+|||+||.+||++|++ +|+++||||||||++|.|+.. +++++ ..++++++
T Consensus 14 ~~~~ipvF~PT~eEF~df~~Yi~~ie~~Ga~~~Gi~KIIPP~~W~~r~~-~~~~~-----------------~~~i~~pi 75 (354)
T 3dxt_A 14 PNCNIMIFHPTKEEFNDFDKYIAYMESQGAHRAGLAKIIPPKEWKARET-YDNIS-----------------EILIATPL 75 (354)
T ss_dssp TTCCCEEECCCTTGGGCHHHHHHHHHHTTGGGGSEEEECCCTTCCSSSC-STTCT-----------------TCEESSCE
T ss_pred CCCCcceecCCHHHHhCHHHHHHHHHhccccccCcccccCcccccCccc-ccchh-----------------cccccCCc
Confidence 345678999999999999999999997 578999999999999999863 44442 24566777
Q ss_pred ccccccCCCCCCCCCcccccCCcccHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHhhhhcCCCCcceeecCCCCCC
Q 039624 95 QQIGFCPRKPRPVQKPVWQSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALEIESLYWKASVDKPFSVEYANDMPGS 174 (466)
Q Consensus 95 Q~l~~~~~~~~~~~~~~~~sg~~ytl~~F~~~a~~f~~~~~~~~~~~~~~~~~~~vE~~fW~~~~~~~v~V~YgaDl~GS 174 (466)
||+... ..+...+.....+.||+++|+++|+..+ +. .+.+.+.++||++|||++... .++||||+.||
T Consensus 76 ~q~~~g---~~G~~~~~~~~~k~~t~~~f~~~a~~~~------~~-~p~~~~~~~lE~~fW~~~~~~--~p~YgaD~~gS 143 (354)
T 3dxt_A 76 QQVASG---RAGVFTQYHKKKKAMTVGEYRHLANSKK------YQ-TPPHQNFEDLERKYWKNRIYN--SPIYGADISGS 143 (354)
T ss_dssp EEEEEE---ETTEEEEEEEECCCEEHHHHHHHHTSTT------TS-CCCCSSHHHHHHHHHHHGGGC--CCEEEEEEECC
T ss_pred eeeecC---CCceEEEeeeccCccCHHHHHHHHhhhh------cc-CCCCCCHHHHHHHHhhhcccC--CceeeecCCCc
Confidence 776421 1122222334568999999999998532 12 456788999999999987543 36899999999
Q ss_pred ccCCCcccccccCCCcccCCCCccCCCCCCCCCCchhhhcCCCCCCccceeeeecccCcccceeCCCCceeeEeeeeCCc
Q 039624 175 AFVPVRKIREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGAS 254 (466)
Q Consensus 175 ~F~~~~~~~~~~~~~~~~~~~~WNL~nlp~~~~SlL~~l~~~i~Gv~~P~lYiGm~~S~f~WH~ED~~l~SINY~H~Gap 254 (466)
+|+.+ .++|||+|||.+.++||++++.+|+|||+||||+||+||+||||+||++||||||+|+|+|
T Consensus 144 ~F~~~--------------~~~WNL~~L~~~~~~Ll~~~~~~I~GVntP~LYiGm~~Stf~WH~ED~~L~SINYlH~Gap 209 (354)
T 3dxt_A 144 LFDEN--------------TKQWNLGHLGTIQDLLEKECGVVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHLGEP 209 (354)
T ss_dssp CSCTT--------------CCSSCTTSSCCHHHHHHHHHCCCCCCCCCCEEEEECTTCEEEEECCGGGCEEEEEEEEESC
T ss_pred ccCCC--------------cchhhhhhccchhHHHHhhcCCCCCCccceeeeeccccCCCcceecCCcceEEEEEecCCc
Confidence 99874 5899999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEecChhhHHHHHHHHHHcCCCCCCCchhhhhhhcCCccccChhhHhcCCCCcceeeccCCcEEEEcCCcceeeeccc
Q 039624 255 KTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHG 334 (466)
Q Consensus 255 K~WY~VP~~~~~kfE~l~~~~~~~~~~~~~~~~~~L~h~~~~isP~~L~~~GIpv~r~vQ~pGEfVvtfP~aYH~gfn~G 334 (466)
|+||+||++++++||++|++.... . ...|.+||+|++++++|+.|+++||||++++|+|||||||||+|||+|||+|
T Consensus 210 K~WY~VP~~~~~kfE~l~k~~~p~-~--~~~c~~fL~h~~~lisP~~L~~~GIpv~~~vQ~pGEfViTfP~aYH~gfn~G 286 (354)
T 3dxt_A 210 KTWYVVPPEHGQRLERLARELFPG-S--SRGCGAFLRHKVALISPTVLKENGIPFNRITQEAGEFMVTFPYGYHAGFNHG 286 (354)
T ss_dssp EEEEEECGGGHHHHHHHHHHHSHH-H--HHHCTTGGGGCCEEECHHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEESS
T ss_pred eEEEEeCHHHHHHHHHHHHHhCch-h--hhhcHHHHhcCcccCCHHHHHHCCCceEEEEeCCCcEEEECCCceEEEeecc
Confidence 999999999999999999986321 1 1246789999999999999999999999999999999999999999999999
Q ss_pred cceehhhcccCchhHHHHHHHHHHHHhcCCCCccchHHHHH
Q 039624 335 FNCGEAANIATPEWLNIAKDAAIRRASINYPPMVSHFQLLY 375 (466)
Q Consensus 335 fn~aEavNFA~~~Wl~~g~~a~~~~~~~~~~~~~~~~~Ll~ 375 (466)
|||+||||||+++|+++|+.|.+|..... ...|+|+.++-
T Consensus 287 fn~aEAvNFA~~~Wl~~g~~A~~C~C~~~-~v~i~~d~~~~ 326 (354)
T 3dxt_A 287 FNCAEAINFATPRWIDYGKMASQCSCGEA-RVTFSMDAFVR 326 (354)
T ss_dssp SEEEEEEEECCGGGHHHHHHCCCCCSSSC-CCCHHHHHHHH
T ss_pred ccHhHhhccCcHHHHHhhhhcccccccCc-cceecHHHHHH
Confidence 99999999999999999999977754433 24478887764
No 2
>2ox0_A JMJC domain-containing histone demethylation PROT; double-stranded beta helix, demethylase, oxygenase, SGC, STR genomics, structural genomics consortium, oxidoreductase; HET: MLY ALY OGA; 1.95A {Homo sapiens} PDB: 2oq7_A* 2os2_A* 2ot7_A* 2oq6_A* 2vd7_A* 2ybk_A* 2ybp_A* 2ybs_A* 3njy_A* 3pdq_A* 3u4s_A* 2p5b_A* 2q8c_A* 2q8d_A* 2q8e_A* 2gp5_A* 2gp3_A* 2wwj_A* 2pxj_A* 2xml_A*
Probab=100.00 E-value=5.3e-88 Score=691.59 Aligned_cols=311 Identities=31% Similarity=0.479 Sum_probs=264.4
Q ss_pred CCCceecCChhhcCChHHHHHHHHh-hhcccCeeeecCCCCCCCcchhhHHHHHHHHHHhhhcCCCCCCCCCcccceecc
Q 039624 18 PVAPEFHPTLAEFQDPIAYIFKIEK-EASQYGICKIVPPVPPPPKKTAITFLNRSLAQRAAATGGATSSSGPTFTTRQQQ 96 (466)
Q Consensus 18 p~~pvf~PT~eEF~dp~~yi~~i~~-~a~~~GI~KIvPP~~w~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~F~tR~Q~ 96 (466)
++|||||||+|||+||++||++|++ +|++|||||||||++|+|++. ++++ ...++++++||
T Consensus 34 ~~iPVF~PT~EEF~Df~~YI~kIe~~gA~~~GI~KIIPP~~W~p~~~-~~~~-----------------~~~~i~~piqQ 95 (381)
T 2ox0_A 34 ARIMTFYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRAS-YDDI-----------------DDLVIPAPIQQ 95 (381)
T ss_dssp CCCEEECCCHHHHSCHHHHHHHHHHTTGGGGSEEEECCCTTCCSCSC-STTC-----------------TTCEESSCEEE
T ss_pred CCCceEcCCHHHHhCHHHHHHHHHhccccccCceeecCCccCCCccc-cchh-----------------hhcccCCccee
Confidence 4788999999999999999999998 488999999999999999863 3322 23567888888
Q ss_pred ccccCCCCCCCCCcccccCCcccHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHhhhhcCCCCcceeecCCCCCCcc
Q 039624 97 IGFCPRKPRPVQKPVWQSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALEIESLYWKASVDKPFSVEYANDMPGSAF 176 (466)
Q Consensus 97 l~~~~~~~~~~~~~~~~sg~~ytl~~F~~~a~~f~~~~~~~~~~~~~~~~~~~vE~~fW~~~~~~~v~V~YgaDl~GS~F 176 (466)
+.... .+........++.|||++|+++|++++ .+ .+...+.++||++|||+|.. ++|+||+|+.||+|
T Consensus 96 ~~~g~---~g~~~~~~~~~k~~tl~~f~~~a~~~~-----~~--~p~~~~~~~lE~~fWr~v~~--~~~~YgaD~~gS~f 163 (381)
T 2ox0_A 96 LVTGQ---SGLFTQYNIQKKAMTVREFRKIANSDK-----YC--TPRYSEFEELERKYWKNLTF--NPPIYGADVNGTLY 163 (381)
T ss_dssp EEEEE---TTEEEEEEEECCCEEHHHHHHHHHSTT-----TS--CCCCSSHHHHHHHHHHHTTS--SCCEEEEEEECCCS
T ss_pred eecCC---CcccccccccccccCHHHHHHHhcccc-----cC--CCccCCHHHHHHHHHhhCCc--CCceeecCCCcccC
Confidence 75321 111111112368899999999998653 12 35667899999999999864 46799999999999
Q ss_pred CCCcccccccCCCcccCCCCccCCCCCCCCCCchhhhcCCCCCCccceeeeecccCcccceeCCCCceeeEeeeeCCcee
Q 039624 177 VPVRKIREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKT 256 (466)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~WNL~nlp~~~~SlL~~l~~~i~Gv~~P~lYiGm~~S~f~WH~ED~~l~SINY~H~GapK~ 256 (466)
+.. .++|||++||.+.++||++++.+|+|||+||||+||+||+||||+||++||||||+|+|+||+
T Consensus 164 ~~~--------------~~~WNL~~Lp~ll~~ll~~~~~~I~GVn~P~LYiGm~~S~f~WH~ED~~L~SINYlH~GapK~ 229 (381)
T 2ox0_A 164 EKH--------------VDEWNIGRLRTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKS 229 (381)
T ss_dssp CTT--------------CCSSCTTCCCCGGGHHHHHHCCCCBTTTSCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEE
T ss_pred CCC--------------CCCCchhhhhhHHHHHHHhcCCCCCCcccceEEeeccccCcCceecCCcceeeEEeecCCceE
Confidence 864 589999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecChhhHHHHHHHHHHcCCCCCCCchhhhhhhcCCccccChhhHhcCCCCcceeeccCCcEEEEcCCcceeeeccccc
Q 039624 257 WYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFN 336 (466)
Q Consensus 257 WY~VP~~~~~kfE~l~~~~~~~~~~~~~~~~~~L~h~~~~isP~~L~~~GIpv~r~vQ~pGEfVvtfP~aYH~gfn~Gfn 336 (466)
||+||++++++||++|++..+. . ...|.++|+|++++++|+.|+++||||++++|+|||||||||+|||+|||+|||
T Consensus 230 WY~VP~~~~~kfE~l~~~~~P~-~--~~~~~~~L~h~~~~isP~~L~~~GIpv~r~vQ~pGEfViTfP~aYH~gfn~GfN 306 (381)
T 2ox0_A 230 WYSVPPEHGKRLERLAKGFFPG-S--AQSCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFN 306 (381)
T ss_dssp EEEECGGGHHHHHHHHHHHSHH-H--HHHCTTGGGGSCEEECHHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEECSSE
T ss_pred EEecCHHHHHHHHHHHHHhChh-h--hhcchHHhhccccccCHHHHHHCCCceEEEEecCCCEEEECCCcEEEeecCccc
Confidence 9999999999999999986321 1 124678999999999999999999999999999999999999999999999999
Q ss_pred eehhhcccCchhHHHHHHHHHHHHhcCCCCccchHHHHHH
Q 039624 337 CGEAANIATPEWLNIAKDAAIRRASINYPPMVSHFQLLYD 376 (466)
Q Consensus 337 ~aEavNFA~~~Wl~~g~~a~~~~~~~~~~~~~~~~~Ll~~ 376 (466)
|+||||||+++|+++|+.|.+|..... .-.++|+.++-+
T Consensus 307 ~aEAvNFA~~~Wl~~g~~a~~c~c~~~-~v~i~~d~~~~~ 345 (381)
T 2ox0_A 307 CAESTNFATRRWIEYGKQAVLCSCRKD-MVKISMDVFVRK 345 (381)
T ss_dssp EEEEEEECCTTHHHHHHHCCCCCSSTT-CCCCCCHHHHHH
T ss_pred HHHHhccCcHHHHHHhHhhhhccccCC-ceeecHHHHHHH
Confidence 999999999999999999987754332 334678888654
No 3
>3opt_A DNA damage-responsive transcriptional repressor R; RPH1, histone demethylase, catalytic core, oxidoreductase; HET: DNA AKG; 2.20A {Saccharomyces cerevisiae} PDB: 3opw_A*
Probab=100.00 E-value=2.7e-85 Score=667.14 Aligned_cols=312 Identities=28% Similarity=0.496 Sum_probs=209.6
Q ss_pred CCCceecCChhhcCChHHHHHHHHhhhcccCeeeecCCCCCCCcc---hhhHHHHHHHHHHhhhcCCCCCCCCCccccee
Q 039624 18 PVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKIVPPVPPPPKK---TAITFLNRSLAQRAAATGGATSSSGPTFTTRQ 94 (466)
Q Consensus 18 p~~pvf~PT~eEF~dp~~yi~~i~~~a~~~GI~KIvPP~~w~p~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~F~tR~ 94 (466)
+.|||||||+|||+||.+||++|++.++++||||||||++|.++. ..+++|++. ....++.+...+. ...|+ +
T Consensus 12 ~~~pVF~PT~eeF~dF~~yi~~i~~~g~~~Gi~KVIPPkeW~~~~~~~~~~~~l~~~-~i~~PI~Q~~~G~-~G~~~--~ 87 (373)
T 3opt_A 12 GGVPVFKPTYEQFEDFYAYCKAINKYGMKSGVVKVIPPKEWKDKLDLPYSAETLQKI-KIKSPIQQHISGN-KGLFM--V 87 (373)
T ss_dssp SSSEEECCCHHHHTCHHHHHHTTHHHHTTSSEEEECCCHHHHTTSCSSCCHHHHHHC-EEESCEEEEEEES-SSEEE--E
T ss_pred CCCCeeCCCHHHHhCHHHHHHHHHHhccccCeEEEeCchhhhhcccCCCcHhHHhcC-cCCCCcEEEecCC-CceEE--E
Confidence 569999999999999999999999999999999999999999885 345666432 1111221111111 12221 2
Q ss_pred ccccc------------c-----CCC--CCCCCCc----------ccccCCcccHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 039624 95 QQIGF------------C-----PRK--PRPVQKP----------VWQSGEYYTFQEFETKAKNFEKSYLKKCGNKKAAL 145 (466)
Q Consensus 95 Q~l~~------------~-----~~~--~~~~~~~----------~~~sg~~ytl~~F~~~a~~f~~~~~~~~~~~~~~~ 145 (466)
|++.- + +++ .|+..+. .-..+..+|+.+|+++++.|+.. ...-....
T Consensus 88 ~nie~~r~~~~~q~k~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 163 (373)
T 3opt_A 88 QNVEKNKTYNIIQWKDLSKDYVPPEDPKARRNSRKGSVSKSTKLKLKNFESSFNIDDFEQFRTEYTID----LSDFQNTE 163 (373)
T ss_dssp EEEECSCEEEHHHHHHHTTSSCCCCC------------------------CCCCHHHHHHHTTTSSCC----CTTSSCHH
T ss_pred eeeccccccCHHHHHHhhhhcCCCcccccccccccccccccccccccccccccchHHHHHHHHhhccc----hhhccCcc
Confidence 22110 0 000 0000000 00001134444444433222110 00000112
Q ss_pred ChHHHHHHhhhhcCCCCcceeecCCCCCCccCCCcccccccCCCcccCCCCccCCCCCCCCCCchhhhcCCCCCCcccee
Q 039624 146 SALEIESLYWKASVDKPFSVEYANDMPGSAFVPVRKIREAVGEGVTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPMV 225 (466)
Q Consensus 146 ~~~~vE~~fW~~~~~~~v~V~YgaDl~GS~F~~~~~~~~~~~~~~~~~~~~WNL~nlp~~~~SlL~~l~~~i~Gv~~P~l 225 (466)
+.++||++|||++.. .+|+||||++||+|+.+ .++|||+||| +||++++.+|+|||+|||
T Consensus 164 ~~~~lE~~yW~~~~~--~~p~YgaD~~GS~F~~~--------------~~~WNL~~Lp----~lL~~l~~~I~GVntP~L 223 (373)
T 3opt_A 164 RLKFLEEYYWKTLNF--TTPMYGADTPGSIFPEG--------------LNVWNVAKLP----NILDHMETKVPGVNDSYL 223 (373)
T ss_dssp HHHHHHHHHHHTTTT--SCCEEEEEEECCCSCTT--------------CCSSCTTSCC------------------CCEE
T ss_pred hHHHHHHHHHHhccC--CCceEecCCCCCCcCCC--------------CCccChhhhh----hHHHHhcccCCCcchhhe
Confidence 346899999999864 35699999999999874 6899999997 699999999999999999
Q ss_pred eeecccCcccceeCCCCceeeEeeeeCCceeEEecChhhHHHHHHHHHHcCCCCCCCchhhhhhhcCCccccChhhHhcC
Q 039624 226 YIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGA 305 (466)
Q Consensus 226 YiGm~~S~f~WH~ED~~l~SINY~H~GapK~WY~VP~~~~~kfE~l~~~~~~~~~~~~~~~~~~L~h~~~~isP~~L~~~ 305 (466)
|+||+||+||||+||++|+||||+|+|+||+||+||++++++||++|++... +.. ..|.++|+|++++++|+.|+++
T Consensus 224 YvGm~~Stf~WH~ED~~L~SINYlH~GapK~WY~VP~~~~~kfE~l~k~~~p-~~~--~~c~~fL~h~~~lisP~~L~~~ 300 (373)
T 3opt_A 224 YAGLWKASFSWHLEDQDLYSINYIHFGAPKQWYSIPQEDRFKFYKFMQEQFP-EEA--KNCPEFLRHKMFLASPKLLQEN 300 (373)
T ss_dssp EEECTTCEEEEECCGGGCEEEEEEEEESCEEEEECCGGGHHHHHHHHHHSSH-HHH--SSCSSCTTTSCEEECHHHHHTT
T ss_pred eeccccCCcceeecCCcceeEEEeecCCCeEEEEeCHHHHHHHHHHHHHhCh-hhh--hhCHHHhhCCcccCCHHHHHhc
Confidence 9999999999999999999999999999999999999999999999998632 111 1367899999999999999999
Q ss_pred CCCcceeeccCCcEEEEcCCcceeeeccccceehhhcccCchhHHHHHHHHHHHH
Q 039624 306 GVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAAIRRA 360 (466)
Q Consensus 306 GIpv~r~vQ~pGEfVvtfP~aYH~gfn~Gfn~aEavNFA~~~Wl~~g~~a~~~~~ 360 (466)
||||++++|+|||||||||+|||+|||+||||+||||||+++||++|++|..|..
T Consensus 301 GIpv~r~vQ~pGEfViTfP~aYH~gfn~Gfn~aEAvNFA~~~Wl~~g~~a~~C~C 355 (373)
T 3opt_A 301 GIRCNEIVHHEGEFMITYPYGYHAGFNYGYNLAESVNFALEEWLPIGKKAGKCHC 355 (373)
T ss_dssp TCCCEEEEECTTCEEEECTTCCEEEEESSSEEEEEEEECCC--------------
T ss_pred CCceEEEEECCCCEEEECCCceEEEEecCccHHHHHccCcHHHHHhhccCccCcc
Confidence 9999999999999999999999999999999999999999999999999987754
No 4
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=100.00 E-value=5.2e-47 Score=396.80 Aligned_cols=170 Identities=18% Similarity=0.208 Sum_probs=155.9
Q ss_pred CCCCchhhhcCCCCCCccceeeeecccCcccceeCCCCceeeEeeeeCCceeEEecChhhHHHHHHHHHHcCCCCCCCch
Q 039624 205 AKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPL 284 (466)
Q Consensus 205 ~~~SlL~~l~~~i~Gv~~P~lYiGm~~S~f~WH~ED~~l~SINY~H~GapK~WY~VP~~~~~kfE~l~~~~~~~~~~~~~ 284 (466)
..||||+|++..|+|||+||||+||+||+|+||+||++|+||||+|+|++|+||+||++++++||+++++.+.
T Consensus 219 ~~gslLs~l~~~I~GVNtpqLYigm~gS~t~wH~Ed~~l~SINynhggg~c~WY~VP~e~~~k~e~l~~k~~~------- 291 (510)
T 4ask_A 219 STGNMLSHVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWETISAFCDRHGV------- 291 (510)
T ss_dssp CTTBGGGGSSSCCTTTTSCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHTTC-------
T ss_pred CCCchhhhCCCcCCCcChhheEEccccccccceecCCcceeEEEeecCCceeEEEECHHHHHHHHHHHHHhCc-------
Confidence 5689999999999999999999999999999999999999999999999999999999999999999997531
Q ss_pred hhhhhhcCCccccChhhHhcCCCCcceeeccCCcEEEEcCCcceeeeccccceehhhcccCchhHH--HHHHHHHHHHhc
Q 039624 285 VTFATLGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLN--IAKDAAIRRASI 362 (466)
Q Consensus 285 ~~~~~L~h~~~~isP~~L~~~GIpv~r~vQ~pGEfVvtfP~aYH~gfn~Gfn~aEavNFA~~~Wl~--~g~~a~~~~~~~ 362 (466)
+++ +..++++|+.|+++||||+|++|+|||||||||||||||+|+|||+++|||||+++|.+ .+.++..+++..
T Consensus 292 ---d~l-~~~~~pspe~L~kagIPvyr~iQkPGdfVit~PgtyH~Vqs~Gf~~niaWNvap~t~~qlqlA~e~y~~n~~~ 367 (510)
T 4ask_A 292 ---DYL-TGSWWPILDDLYASNIPVYRFVQRPGDLVWINAGTVHWVQATGWCNNIAWNVGPLTAYQYQLALERYEWNEVK 367 (510)
T ss_dssp ---CTT-TSCBCCCHHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEECBSSHHHHHHHHHHHHHHHHT
T ss_pred ---chh-hccccCCHHHHHhCCCCeEEEEECCCCEEEECCCceEEEEecCeeeeeEEEecCCCHHHHHHHHHHHHHHHHh
Confidence 244 56788999999999999999999999999999999999999999999999999998754 566677788899
Q ss_pred CCCCccchHHHHHHHHHHhhcCC
Q 039624 363 NYPPMVSHFQLLYDLAIAMHSSI 385 (466)
Q Consensus 363 ~~~~~~~~~~Ll~~ia~~~~~~~ 385 (466)
++.++||+++|+|+||+.....+
T Consensus 368 ~~~SivPm~~L~Wn~Ar~~k~~d 390 (510)
T 4ask_A 368 NVKSIVPMIHVSWNVARTVKISD 390 (510)
T ss_dssp TCCCSSCHHHHHHHHHHHCCCCC
T ss_pred CcCcccChHHHHHHHHhhhhccC
Confidence 99999999999999998765443
No 5
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=100.00 E-value=8.1e-47 Score=400.86 Aligned_cols=176 Identities=18% Similarity=0.185 Sum_probs=160.5
Q ss_pred CCccCCCCCC-----CCCCchhhhcCCCCCCccceeeeecccCcccceeCCCCceeeEeeeeCCceeEEecChhhHHHHH
Q 039624 195 TPWNMRGVSR-----AKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFE 269 (466)
Q Consensus 195 ~~WNL~nlp~-----~~~SlL~~l~~~i~Gv~~P~lYiGm~~S~f~WH~ED~~l~SINY~H~GapK~WY~VP~~~~~kfE 269 (466)
..|||++||. ..||||+|++..|+|||+||||+||+||+||||+||++|+||||+|+|++|+||+||.+++++||
T Consensus 229 ql~el~kLP~~lr~~~~gslL~~~~~~I~Gvn~pqLYig~~gS~t~~H~E~~~l~SiNynhggg~~~Wy~VP~e~~~k~e 308 (531)
T 3avr_A 229 QLHELTKLPAFVRVVSAGNLLSHVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFVVPEGYWGVLN 308 (531)
T ss_dssp HHHHGGGSCGGGCSSCTTCGGGGSCSCCBTTSSCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHH
T ss_pred HHHHHHhCCHHHcccCccchhhhcCCCCCCcChhheEeecCcccccceecCCcceeeEeecCCCCeEEEEeCHHHHHHHH
Confidence 4668899986 58999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCchhhhhhhcCCccccChhhHhcCCCCcceeeccCCcEEEEcCCcceeeeccccceehhhcccCchhH
Q 039624 270 EVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWL 349 (466)
Q Consensus 270 ~l~~~~~~~~~~~~~~~~~~L~h~~~~isP~~L~~~GIpv~r~vQ~pGEfVvtfP~aYH~gfn~Gfn~aEavNFA~~~Wl 349 (466)
+++++++. ++ .+..++++|+.|+++||||||++|+|||||||||||||||+|+||||+||||||+++|+
T Consensus 309 ~l~~k~~~----------~~-~~~~~~~~p~~L~~~gIPvyr~vQkpGd~Vi~~PgayH~v~n~G~~~n~awN~a~~~~~ 377 (531)
T 3avr_A 309 DFCEKNNL----------NF-LMGSWWPNLEDLYEANVPVYRFIQRPGDLVWINAGTVHWVQAIGWCNNIAWNVGPLTAC 377 (531)
T ss_dssp HHHHHTTC----------CT-TTSCBCCCHHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEECCSSHH
T ss_pred HHHHHcCC----------Ch-hhceeecCHHHHHhCCCCeEEEEECCCCEEEECCCceEEEEecceeeeeEEEeccCchH
Confidence 99987631 12 35678899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH---HhcCCCCccchHHHHHHHHHHhh
Q 039624 350 NIAKDAAIRR---ASINYPPMVSHFQLLYDLAIAMH 382 (466)
Q Consensus 350 ~~g~~a~~~~---~~~~~~~~~~~~~Ll~~ia~~~~ 382 (466)
+++. |.++| +..++.++|+|++|+|++|+...
T Consensus 378 q~~~-A~e~y~~Nk~~~~~sivp~~~L~wn~a~~~~ 412 (531)
T 3avr_A 378 QYKL-AVERYEWNKLQSVKSIVPMVHLSWNMARNIK 412 (531)
T ss_dssp HHHH-HHHHHHHHHHHTCCCSSCHHHHHHHHHHHCC
T ss_pred HHHH-HHHHHHHhhhccCCCCCCHHHHHHHHHhhhh
Confidence 9975 66665 45567899999999999998643
No 6
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-45 Score=372.11 Aligned_cols=151 Identities=17% Similarity=0.188 Sum_probs=134.8
Q ss_pred cCCCCCC-----CCCCchhhhcCCCCCCccceeeeecccCcccceeCCCCceeeEeeeeCCceeEEecChhhHHHHHHHH
Q 039624 198 NMRGVSR-----AKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVV 272 (466)
Q Consensus 198 NL~nlp~-----~~~SlL~~l~~~i~Gv~~P~lYiGm~~S~f~WH~ED~~l~SINY~H~GapK~WY~VP~~~~~kfE~l~ 272 (466)
+|+.||. ..+|||+|++..|+|||+||||+||+||+||||+||++|+||||+|+|++|+||+||.+++.+||+++
T Consensus 173 el~kLP~~lr~~~~gslL~~~~~~I~Gvn~pqLYig~~gS~t~~H~Ed~~l~SiNynhgp~~~~Wy~VP~e~~~~~e~l~ 252 (332)
T 2xxz_A 173 ELLKLPAFMRVTSTGNMLSHVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWETISAFC 252 (332)
T ss_dssp HHTTSCGGGCTTTTCCCSEETTEECCCTTSEEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHH
T ss_pred HHhhCcHhhcccCccchhhhcCCcCCCcChhheEeecCcccccceecCCcceeEEeecCCCceEEEEECHHHHHHHHHHH
Confidence 3677764 37999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCCCchhhhhhhcCCccccChhhHhcCCCCcceeeccCCcEEEEcCCcceeeeccccceehhhcccCchhHHHH
Q 039624 273 RVHGYGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIA 352 (466)
Q Consensus 273 ~~~~~~~~~~~~~~~~~L~h~~~~isP~~L~~~GIpv~r~vQ~pGEfVvtfP~aYH~gfn~Gfn~aEavNFA~~~Wl~~g 352 (466)
++.+. + +.+..++++|+.|+++||||||++|+|||||||||||||||||+||||+||||||+++|+++.
T Consensus 253 ~k~~~----------d-~~~~~~~~~p~~L~~~gIPvyr~~QkpGd~Vi~~PgayH~v~n~G~~~n~awN~a~~~~~q~~ 321 (332)
T 2xxz_A 253 DRHGV----------D-YLTGSWWPILDDLYASNIPVYRFVQRPGDLVWINAGTVHWVQATGWCNNIAWNVGPLTAYQYQ 321 (332)
T ss_dssp HHTTC----------C-TTTSCBCCCHHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEEESCTTGGGG
T ss_pred HhcCC----------c-hhhceecCCHHHHHhCCCCeEEEEECCCCEEEECCCceEEEEecceeeEEEEEeCCCcHHHHH
Confidence 97531 1 236678999999999999999999999999999999999999999999999999999999884
Q ss_pred HHHHHHHH
Q 039624 353 KDAAIRRA 360 (466)
Q Consensus 353 ~~a~~~~~ 360 (466)
.|.++|.
T Consensus 322 -~a~erye 328 (332)
T 2xxz_A 322 -LALERYE 328 (332)
T ss_dssp -GC-----
T ss_pred -HHHHHHH
Confidence 6666654
No 7
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=97.82 E-value=3.6e-05 Score=78.86 Aligned_cols=98 Identities=17% Similarity=0.232 Sum_probs=75.8
Q ss_pred eeEEecChhhHHHHHHHHHHcCC--CCCCCchhhhhhhcCCccccChhh----HhcCCCCcceeeccCCcEEEEcCCcce
Q 039624 255 KTWYGVPMEAANAFEEVVRVHGY--GEEINPLVTFATLGEKTTMISPEV----FVGAGVPCCRLVQNAGEFVVTFPRAYH 328 (466)
Q Consensus 255 K~WY~VP~~~~~kfE~l~~~~~~--~~~~~~~~~~~~L~h~~~~isP~~----L~~~GIpv~r~vQ~pGEfVvtfP~aYH 328 (466)
-+|-...++++.|+.++++++.- .....+ ..+-++..++.++... ..+.||..+.++|++||.|++-+|++|
T Consensus 234 AlW~Ifr~~D~~klr~~L~~~~~e~~~~~~~--~~dPihdq~~yL~~~~r~~L~ee~gv~~~~~~Q~~GeavfiPaG~~H 311 (392)
T 2ypd_A 234 ALWHIYAGKDVDKIREFLQKISKEQGLEVLP--EHDPIRDQSWYVNKKLRQRLLEEYGVRTCTLIQFLGDAIVLPAGALH 311 (392)
T ss_dssp EEEEEECGGGHHHHHHHHHHHHHHHC--------CCHHHHTCCCCCHHHHHHHHHHHCCCCEEEEEETTCEEEECTTCEE
T ss_pred ceeeeeCHhhHHHHHHHHHHHHHhhCCCccC--CCCcCcCCCEEecHHHHHHHHHhcCCeeEEEEEcCCCEEEecCCCHH
Confidence 58999999999999999987521 100100 1123445577788743 345899999999999999999999999
Q ss_pred eeeccccceehhhcccCchhHHHHHH
Q 039624 329 MGFSHGFNCGEAANIATPEWLNIAKD 354 (466)
Q Consensus 329 ~gfn~Gfn~aEavNFA~~~Wl~~g~~ 354 (466)
.+.|.+-++..|+||..+.=+.....
T Consensus 312 QV~Nl~~~i~va~df~spe~~~~c~~ 337 (392)
T 2ypd_A 312 QVQNFHSCIQVTEDFVSPEHLVESFH 337 (392)
T ss_dssp EEEESSEEEEEEEEECCGGGHHHHHH
T ss_pred HHhcccchhhHhhhhcChhhHHHHHH
Confidence 99999999999999999998875543
No 8
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=97.69 E-value=0.00023 Score=73.55 Aligned_cols=137 Identities=12% Similarity=0.094 Sum_probs=97.4
Q ss_pred eeeeecccCcccceeCCCCceeeEeeeeCCceeEEecChhhHH--HHHHHHHHcCCCCCCCchhhhhhhcCCccccChhh
Q 039624 224 MVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAAN--AFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEV 301 (466)
Q Consensus 224 ~lYiGm~~S~f~WH~ED~~l~SINY~H~GapK~WY~VP~~~~~--kfE~l~~~~~~~~~~~~~~~~~~L~h~~~~isP~~ 301 (466)
|+++|+.+|.+.+|++-...++.|.+..| .|.||-+||.... .++...... . ....++ +.
T Consensus 177 ~~~mGp~gS~T~fHiD~~gTs~w~~vi~G-rK~w~L~PPt~~nl~~y~~~~~s~------~--~~e~~~--------~~- 238 (392)
T 3pua_A 177 YCLICVKDSYTDFHIDSGGASAWYHVLKG-EKTFYLIRPASANISLYERWRSAS------N--HSEMFF--------AD- 238 (392)
T ss_dssp EEEEECTTCEEEEECCGGGCEEEEEEEEE-EEEEEEECCCHHHHHHHHHHHHST------T--GGGSCG--------GG-
T ss_pred EEEEeCCCCCCCEeECCCCCceeeeeccc-eEEEEEECCCcccccchhhcccCc------c--hhhhhh--------cc-
Confidence 89999999999999998888888888888 8999999998753 222221110 0 000111 11
Q ss_pred HhcCCCCcceeeccCCcEEEEcCCcceeeeccccceehhhcccCchhHHHHHHHHHH--HHhcCCCCccchH-HHHHHHH
Q 039624 302 FVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAAIR--RASINYPPMVSHF-QLLYDLA 378 (466)
Q Consensus 302 L~~~GIpv~r~vQ~pGEfVvtfP~aYH~gfn~Gfn~aEavNFA~~~Wl~~g~~a~~~--~~~~~~~~~~~~~-~Ll~~ia 378 (466)
....+++++|+|||.+++=.|-+|+++|..-+++..-||.+..=++....+.+. +......=.|+++ .+.|-+|
T Consensus 239 ---~~~~~~ev~l~pGEtlfIPsGWwH~V~nledSIai~gNFl~~~nl~~~l~~~~~E~~~~~~~~f~fp~F~~~~wy~~ 315 (392)
T 3pua_A 239 ---QVDKCYKCIVKQGQTLFIPSGWIYATLTPVDCLAFAGHFLHSLSVEMQMRAYEVERRLKLGSLTQFPNFETACWYMG 315 (392)
T ss_dssp ---GSSCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCTTCHHHHHHHHHHHHHHTCCCSSCCTTHHHHHHHHH
T ss_pred ---cccceEEEEECCCcEEeeCCCceEEEecCCCEEEEcCcccChhhHHHHHHHHHHHHHhCCCccCcCCChHHHHHHHH
Confidence 124678999999999999999999999999999999999998877766555432 2222223345555 4567666
Q ss_pred HHh
Q 039624 379 IAM 381 (466)
Q Consensus 379 ~~~ 381 (466)
..+
T Consensus 316 ~~~ 318 (392)
T 3pua_A 316 KHL 318 (392)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 9
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=97.67 E-value=0.00019 Score=73.65 Aligned_cols=137 Identities=14% Similarity=0.077 Sum_probs=94.9
Q ss_pred eeeeecccCcccceeCCCCceeeEeeeeCCceeEEecChhhHH--HHHHHHHHcCCCCCCCchhhhhhhcCCccccChhh
Q 039624 224 MVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAAN--AFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEV 301 (466)
Q Consensus 224 ~lYiGm~~S~f~WH~ED~~l~SINY~H~GapK~WY~VP~~~~~--kfE~l~~~~~~~~~~~~~~~~~~L~h~~~~isP~~ 301 (466)
|+++|+.+|.+.+|++-....+-|.+..| -|.||-+||.... .+++... . .+. ...++.
T Consensus 150 ~l~mGp~gS~T~~HiD~~gts~w~~vv~G-rK~w~L~PPt~~nl~~y~~~~~----s--~~~--~e~~~~---------- 210 (371)
T 3k3o_A 150 YCLMSVRDSYTDFHIDFGGTSVWYHVLKG-EKIFYLIRPTNANLTLFECWSS----S--SNQ--NEMFFG---------- 210 (371)
T ss_dssp EEEEECTTEEEEEECCGGGCEEEEEEEEE-EEEEEEECCCHHHHHHHHHHHT----S--TTG--GGSCGG----------
T ss_pred EEEEcCCCCCCCeEECCCCCceeEEEeee-EEEEEEECCCcccccccccccc----C--Ccc--chhhcc----------
Confidence 89999999999999999888888888888 8999999998753 2222110 0 000 001111
Q ss_pred HhcCCCCcceeeccCCcEEEEcCCcceeeeccccceehhhcccCchhHHHHHHHHH--HHHhcCCCCccchH-HHHHHHH
Q 039624 302 FVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAAI--RRASINYPPMVSHF-QLLYDLA 378 (466)
Q Consensus 302 L~~~GIpv~r~vQ~pGEfVvtfP~aYH~gfn~Gfn~aEavNFA~~~Wl~~g~~a~~--~~~~~~~~~~~~~~-~Ll~~ia 378 (466)
.....+++++|+|||.+++=.|-+|+++|..-+++..-||....=++.-..+.+ .+......=.|+.+ .++|-.|
T Consensus 211 --~~~~~~~ev~l~pGEtLfIPsGWwH~V~nledSIai~~NFl~~~nl~~~l~~~~~E~~~~~~~~f~fp~F~~~~w~~~ 288 (371)
T 3k3o_A 211 --DQVDKCYKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGNFLHSLNIEMQLKAYEIEKRLSTADLFRFPNFETICWYVG 288 (371)
T ss_dssp --GTSSCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTTHHHHHHHHHHHHHHC----CCCTTHHHHHHHHH
T ss_pred --cccCceEEEEECCCcEEEeCCCCeEEEecCCCeEEECCcccchhhHHHHHHHHHHHHhcCCCcccccccHHHHHHHHH
Confidence 122468999999999999999999999999999999999999877766554433 22222222235544 4566666
Q ss_pred HHh
Q 039624 379 IAM 381 (466)
Q Consensus 379 ~~~ 381 (466)
..+
T Consensus 289 ~~~ 291 (371)
T 3k3o_A 289 KHI 291 (371)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 10
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=97.66 E-value=0.00048 Score=72.38 Aligned_cols=137 Identities=12% Similarity=0.046 Sum_probs=96.5
Q ss_pred eeeeecccCcccceeCCCCceeeEeeeeCCceeEEecChhhHH--HHHHHHHHcCCCCCCCchhhhhhhcCCccccChhh
Q 039624 224 MVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAAN--AFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEV 301 (466)
Q Consensus 224 ~lYiGm~~S~f~WH~ED~~l~SINY~H~GapK~WY~VP~~~~~--kfE~l~~~~~~~~~~~~~~~~~~L~h~~~~isP~~ 301 (466)
|+++|+.+|.+.+|++-....+.|.+..| .|.||-+||.... .+++.... ... ...++ +
T Consensus 234 ~~~mG~~gS~T~~HiD~~~ts~w~~vi~G-rK~w~L~PPt~~nl~~~~~~~~s------~~~--~~~~~--------~-- 294 (447)
T 3kv4_A 234 YCLMSVRDSYTDFHIDFGGTSVWYHVLKG-EKIFYLIRPTNANLTLFECWSSS------SNQ--NEMFF--------G-- 294 (447)
T ss_dssp EEEEECTTEEEEEECCGGGCEEEEEEEES-EEEEEEECCCHHHHHHHHHHHTC------SSG--GGSCG--------G--
T ss_pred EEEEeCCCCCCCeeECCCCCceeEEEeee-EEEEEEeCCCcccccchhhcccC------cch--hhhhc--------c--
Confidence 89999999999999999888888888888 8999999998643 22222110 000 00111 1
Q ss_pred HhcCCCCcceeeccCCcEEEEcCCcceeeeccccceehhhcccCchhHHHHHHHHHHHHhcCCC--CccchH-HHHHHHH
Q 039624 302 FVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAAIRRASINYP--PMVSHF-QLLYDLA 378 (466)
Q Consensus 302 L~~~GIpv~r~vQ~pGEfVvtfP~aYH~gfn~Gfn~aEavNFA~~~Wl~~g~~a~~~~~~~~~~--~~~~~~-~Ll~~ia 378 (466)
......++++|+|||.+++=.|-+|+++|..-+++..-||.+..-++.-....+--...+.+ =.|+++ .++|-.|
T Consensus 295 --~~~~~~~~v~l~pGetlfIPsGWwH~V~nledsIai~~NF~~~~nl~~~l~~~~~E~~~~~~~~~~~p~f~~~~w~~~ 372 (447)
T 3kv4_A 295 --DQVDKCYKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGNFLHSLNIEMQLKAYEIEKRLSTADLFRFPNFETICWYVG 372 (447)
T ss_dssp --GGSSCCEEEEEETTCEEEECTTCEEEEEESSCEEEEEEEECCSTTHHHHHHHHHHHHHTTCCGGGSCTTHHHHHHHHH
T ss_pred --ccccceEEEEECCCcEEecCCCCeEEEecCCCEEEEccccccccCHHHHHHHHHHHHhcCCCccccccCHHHHHHHHH
Confidence 11246789999999999999999999999999999999999988887665544321222222 135544 4567666
Q ss_pred HHh
Q 039624 379 IAM 381 (466)
Q Consensus 379 ~~~ 381 (466)
..+
T Consensus 373 ~~~ 375 (447)
T 3kv4_A 373 KHI 375 (447)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 11
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=97.62 E-value=0.00028 Score=73.00 Aligned_cols=137 Identities=11% Similarity=0.067 Sum_probs=95.2
Q ss_pred eeeeecccCcccceeCCCCceeeEeeeeCCceeEEecChhhHH--HHHHHHHHcCCCCCCCchhhhhhhcCCccccChhh
Q 039624 224 MVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAAN--AFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEV 301 (466)
Q Consensus 224 ~lYiGm~~S~f~WH~ED~~l~SINY~H~GapK~WY~VP~~~~~--kfE~l~~~~~~~~~~~~~~~~~~L~h~~~~isP~~ 301 (466)
|+++|+.+|.+.+|++-....+.|.+..| .|.|+-+||.... .+++.... ......++ +.
T Consensus 178 ~l~mGp~gS~T~~HiD~~gts~w~~vv~G-rK~w~L~PPt~~nl~ly~~~~~s--------~~~~e~~~--------~~- 239 (397)
T 3kv9_A 178 YCLMGVQDSYTDFHIDFGGTSVWYHVLWG-EKIFYLIKPTDENLARYESWSSS--------VTQSEVFF--------GD- 239 (397)
T ss_dssp EEEEECTTCEEEEECCGGGCEEEEEEEEE-EEEEEEECCCHHHHHHHHHHHTS--------GGGGGSCG--------GG-
T ss_pred EEEEcCCCCCCCEEECCCCCceeeeecCc-eEEEEEeCCcccccccccccccC--------CCcchhhh--------cc-
Confidence 89999999999999999988888889888 8999999998754 22221110 00000111 11
Q ss_pred HhcCCCCcceeeccCCcEEEEcCCcceeeeccccceehhhcccCchhHHHHHHHHHHHHhcCCC--CccchH-HHHHHHH
Q 039624 302 FVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAAIRRASINYP--PMVSHF-QLLYDLA 378 (466)
Q Consensus 302 L~~~GIpv~r~vQ~pGEfVvtfP~aYH~gfn~Gfn~aEavNFA~~~Wl~~g~~a~~~~~~~~~~--~~~~~~-~Ll~~ia 378 (466)
..-.+++++|+|||.+++=.|-+|+++|..-+++..-||....=++....+.+--...+.. =-|+.+ .++|-+|
T Consensus 240 ---~~~~~~~v~l~pGe~lfIPsGW~H~V~nledSIai~~NFl~~~nl~~~l~~~~~E~~~k~~~~~~fp~F~~~~w~~a 316 (397)
T 3kv9_A 240 ---KVDKCYKCVVKQGHTLFVPTGWIHAVLTSQDCMAFGGNFLHNLNIGMQLRCYEMEKRLKTPDLFKFPFFEAICWFVA 316 (397)
T ss_dssp ---GSSCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTTHHHHHHHHHHHHHHTCGGGGGSTTHHHHHHHHH
T ss_pred ---ccCceEEEEECCCCEEEeCCCCeEEccCCcCeEEECCcccCchhHHHHHHHHHHHHhcCCCccCcCccHHHHHHHHH
Confidence 1246789999999999999999999999999999999999988776655443321111111 123434 4567666
Q ss_pred HHh
Q 039624 379 IAM 381 (466)
Q Consensus 379 ~~~ 381 (466)
...
T Consensus 317 ~~~ 319 (397)
T 3kv9_A 317 KNL 319 (397)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 12
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=97.56 E-value=0.0004 Score=73.81 Aligned_cols=138 Identities=11% Similarity=0.046 Sum_probs=95.8
Q ss_pred ceeeeecccCcccceeCCCCceeeEeeeeCCceeEEecChhhHH--HHHHHHHHcCCCCCCCchhhhhhhcCCccccChh
Q 039624 223 PMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAAN--AFEEVVRVHGYGEEINPLVTFATLGEKTTMISPE 300 (466)
Q Consensus 223 P~lYiGm~~S~f~WH~ED~~l~SINY~H~GapK~WY~VP~~~~~--kfE~l~~~~~~~~~~~~~~~~~~L~h~~~~isP~ 300 (466)
-|+++|+.+|.+.+|++-....+.|.+..| .|.|+-+||.... .+++... . .. ....++
T Consensus 268 r~~~mG~~gS~T~~H~D~~~t~~w~~vv~G-~K~w~L~PPt~~~~~~y~~~~~----~--~~--~~~~~~---------- 328 (488)
T 3kv5_D 268 KYCLMGVQDSYTDFHIDFGGTSVWYHVLWG-EKIFYLIKPTDENLARYESWSS----S--VT--QSEVFF---------- 328 (488)
T ss_dssp CEEEEECTTCEEEEECCGGGCEEEEEEEEE-EEEEEEECCCHHHHHHHHHHHT----C--SS--GGGSCG----------
T ss_pred eEEEEcCCCCCCCeEECCCCCceeeeccCe-eEEEEEeCCccccccccccccc----C--Cc--cchhhh----------
Confidence 389999999999999999888888888888 8999999997653 2222110 0 00 000111
Q ss_pred hHhcCCCCcceeeccCCcEEEEcCCcceeeeccccceehhhcccCchhHHHHHHHHHH--HHhcCCCCccchH-HHHHHH
Q 039624 301 VFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAAIR--RASINYPPMVSHF-QLLYDL 377 (466)
Q Consensus 301 ~L~~~GIpv~r~vQ~pGEfVvtfP~aYH~gfn~Gfn~aEavNFA~~~Wl~~g~~a~~~--~~~~~~~~~~~~~-~Ll~~i 377 (466)
.......++++|+|||.+++=.|=+|+++|..-+++..-||....=++.-..+..- .......=.|+++ .++|-+
T Consensus 329 --~~~~~~~~~~~l~pGe~lfIPsGWwH~V~nledsIai~~NF~~~~nl~~~l~~~~~e~~~~~~~~~~~p~f~~~~w~~ 406 (488)
T 3kv5_D 329 --GDKVDKCYKCVVKQGHTLFVPTGWIHAVLTSQDCMAFGGNFLHNLNIGMQLRCYEMEKRLKTPDLFKFPFFEAICWFV 406 (488)
T ss_dssp --GGSSSCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTTHHHHHHHHHHHHHTTCCTTSSCTTHHHHHHHH
T ss_pred --cccccceEEEeeCCCCEEEeCCCceEEeeCCCCeEEEccccCCccCHHHHHHHHHHHHhcCCcccccCccHHHHHHHH
Confidence 11224678999999999999999999999999999999999998877665554332 2222222234444 456666
Q ss_pred HHHh
Q 039624 378 AIAM 381 (466)
Q Consensus 378 a~~~ 381 (466)
|...
T Consensus 407 ~~~~ 410 (488)
T 3kv5_D 407 AKNL 410 (488)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
No 13
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=97.43 E-value=0.001 Score=70.03 Aligned_cols=138 Identities=12% Similarity=0.108 Sum_probs=95.8
Q ss_pred eeeeecccCcccceeCCCCceeeEeeeeCCceeEEecChhhHHH--HHHHHHHcCCCCCCCchhhhhhhcCCccccChhh
Q 039624 224 MVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANA--FEEVVRVHGYGEEINPLVTFATLGEKTTMISPEV 301 (466)
Q Consensus 224 ~lYiGm~~S~f~WH~ED~~l~SINY~H~GapK~WY~VP~~~~~k--fE~l~~~~~~~~~~~~~~~~~~L~h~~~~isP~~ 301 (466)
|+++|..+|.+.+|++-....+.|.+..| .|.|+-+||..... ++.... ... +.. ..-|+.
T Consensus 199 ~~~mGp~gS~T~~H~D~~~ts~w~avi~G-rK~w~L~PP~~~~~~~y~~~~~-s~~--------------q~~-~~~p~~ 261 (451)
T 2yu1_A 199 YCLMSVRGCYTDFHVDFGGTSVWYHIHQG-GKVFWLIPPTAHNLELYENWLL-SGS--------------QGD-IFLGDR 261 (451)
T ss_dssp EEEEECTTCEEEEECCGGGCEEEEEEEES-CEEEEEECCCHHHHHHHHHHHH-TTC--------------CSS-SCHHHH
T ss_pred EEEEccCCCCCCeEECCCCcchhhheecc-eEEEEEeCCCcccccccccccc-ccc--------------chh-hhhccc
Confidence 88999999999999999888888888788 79999999998642 111111 000 000 112332
Q ss_pred HhcCCCCcceeeccCCcEEEEcCCcceeeeccccceehhhcccCchhHHHHHHHH--HHHHhcCCCCccchH-HHHHHHH
Q 039624 302 FVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAA--IRRASINYPPMVSHF-QLLYDLA 378 (466)
Q Consensus 302 L~~~GIpv~r~vQ~pGEfVvtfP~aYH~gfn~Gfn~aEavNFA~~~Wl~~g~~a~--~~~~~~~~~~~~~~~-~Ll~~ia 378 (466)
+ -.+++++++|||.+++=.|=+|++.|..-+++...||.+..=++.-.... +........-.++.+ .++|-+|
T Consensus 262 ~----~~~~~v~l~pGE~LfIPsGWwH~V~nledsIait~NF~~~~nl~~~l~~~~~E~~~~v~~~~~~p~f~~~~w~~~ 337 (451)
T 2yu1_A 262 V----SDCQRIELKQGYTFVIPSGWIHAVYTPTDTLVFGGNFLHSFNIPMQLKIYNIEDRTRVPNKFRYPFYYEMCWYVL 337 (451)
T ss_dssp S----SCCEEEEECTTCEEEECTTCEEEEECSSCEEEEEEEECCSSSHHHHHHHHHHHHHTTCCTTSSCTTHHHHHHHHH
T ss_pred c----ccceEEEECCCcEEEeCCCceEEEecCCCeEEEeeeeCCcccHHHHHHHHHHHHhhCCCccccCccHHHHHHHHH
Confidence 1 25789999999999999999999999999999999999876666543332 233333333445655 5567666
Q ss_pred HHhh
Q 039624 379 IAMH 382 (466)
Q Consensus 379 ~~~~ 382 (466)
..+.
T Consensus 338 ~~~~ 341 (451)
T 2yu1_A 338 ERYV 341 (451)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
No 14
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=97.21 E-value=0.00036 Score=70.77 Aligned_cols=123 Identities=16% Similarity=0.145 Sum_probs=85.5
Q ss_pred cceeeeecccCcccceeCCCCceeeEeeeeCCceeEEecChhhHHHHHHHHHHcCCCCCCCchhhhhhhcCCccccChhh
Q 039624 222 SPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEV 301 (466)
Q Consensus 222 ~P~lYiGm~~S~f~WH~ED~~l~SINY~H~GapK~WY~VP~~~~~kfE~l~~~~~~~~~~~~~~~~~~L~h~~~~isP~~ 301 (466)
.-++++|..+|.+.+|.+.....+++.+..| .|.|+.+|++....+-..-.... +. ......+++.. .-|..
T Consensus 173 ~~~~~~G~~gs~t~~H~D~~~~~~~~~~v~G-~K~~~L~pP~~~~~ly~~~~~~~--~~-~~~~~~~w~~~----~~P~~ 244 (336)
T 3k2o_A 173 YRWFVMGPPRSGTGIHIDPLGTSAWNALVQG-HKRWCLFPTSTPRELIKVTRDEG--GN-QQDEAITWFNV----IYPRT 244 (336)
T ss_dssp CEEEEEECTTCEEEEECCGGGCEEEEEEEES-CEEEEEECTTSCHHHHCCCHHHH--GG-GTTCHHHHHHH----TGGGG
T ss_pred ceEEEECCCCccCCcccCCCccceeeEEEee-eEEEEEeCCCcchhcccCccccc--CC-Cccchhhhhhh----hCcch
Confidence 4578999999999999999888888888888 79999999987543221000000 00 00000111100 11211
Q ss_pred Hhc---CCCCcceeeccCCcEEEEcCCcceeeeccccceehhhcccCchhHHHH
Q 039624 302 FVG---AGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIA 352 (466)
Q Consensus 302 L~~---~GIpv~r~vQ~pGEfVvtfP~aYH~gfn~Gfn~aEavNFA~~~Wl~~g 352 (466)
-.. .+.+.+.++|+|||.+++=+|-+|.+.|.+-+++.+.||....-++.-
T Consensus 245 ~~~~~p~~~~~~~~~l~pGd~l~iP~gw~H~v~~~~~sisv~~~f~~~~nl~~~ 298 (336)
T 3k2o_A 245 QLPTWPPEFKPLEILQKPGETVFVPGGWWHVVLNLDTTIAITQNFASSTNFPVV 298 (336)
T ss_dssp GSTTSCGGGCCEEEEECTTCEEEECTTCEEEEEESSCEEEEEEEECCTTTHHHH
T ss_pred hhhcccccCceEEEEECCCCEEEeCCCCcEEEecCCCeEEEEcccCCcccHHHH
Confidence 110 146788999999999999999999999999999999999999887653
No 15
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=97.13 E-value=0.00032 Score=65.47 Aligned_cols=108 Identities=12% Similarity=0.067 Sum_probs=71.2
Q ss_pred cceeeeecccCcccceeCCCCceeeEeeeeCCceeEEecChhhHHHHHHHHHHcCCCCCCCchhhhhh--hcCCccccCh
Q 039624 222 SPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFAT--LGEKTTMISP 299 (466)
Q Consensus 222 ~P~lYiGm~~S~f~WH~ED~~l~SINY~H~GapK~WY~VP~~~~~kfE~l~~~~~~~~~~~~~~~~~~--L~h~~~~isP 299 (466)
.+++++|..+|.+.+|.... ..++.+..| .|.|..+|+++...+ +............ +.....---|
T Consensus 125 ~~~~wiG~~gs~t~~H~D~~--~n~~~qv~G-~K~w~L~pP~~~~~l--------~~~~~~~~~~~s~vd~~~~d~~~~p 193 (235)
T 4gjz_A 125 TINAWFGPQGTISPLHQDPQ--QNFLVQVMG-RKYIRLYSPQESGAL--------YPHDTHLLHNTSQVDVENPDLEKFP 193 (235)
T ss_dssp EEEEEEECTTCEEEEECCSS--EEEEEEEES-CEEEEEECGGGGGGS--------CBCSSTTTTTBBSSCTTSCCTTTCG
T ss_pred ceEEEEeCCCCCceeeeccc--cceEEEEee-eEeeEEcCccccccc--------ccCcccccCccccccccCcchhhCc
Confidence 46799999999999999875 355566667 899999999886532 1110000000000 0000000112
Q ss_pred hhHhcCCCCcceeeccCCcEEEEcCCcceeeeccccceehhhcc
Q 039624 300 EVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANI 343 (466)
Q Consensus 300 ~~L~~~GIpv~r~vQ~pGEfVvtfP~aYH~gfn~Gfn~aEavNF 343 (466)
. -.+.+.+.++|+|||.+++=++-+|.+.|.+.|++.+++|
T Consensus 194 ~---~~~~~~~~~~l~pGD~LyiP~gW~H~V~~l~~sisvn~w~ 234 (235)
T 4gjz_A 194 K---FAKAPFLSCILSPGEILFIPVKYWHYVRALDLSFSVSFWW 234 (235)
T ss_dssp G---GGGCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEE
T ss_pred c---ccCCCcEEEEECCCCEEEeCCCCcEEEEECCCEEEEEEec
Confidence 2 1245788999999999999999999999999888766665
No 16
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=97.00 E-value=0.0022 Score=68.29 Aligned_cols=111 Identities=14% Similarity=0.081 Sum_probs=82.1
Q ss_pred ceeeeecccCcccceeCCCCceeeEeeeeCCceeEEecChhhHH--HHHHHHHHcCCCCCCCchhhhhhhcCCccccChh
Q 039624 223 PMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAAN--AFEEVVRVHGYGEEINPLVTFATLGEKTTMISPE 300 (466)
Q Consensus 223 P~lYiGm~~S~f~WH~ED~~l~SINY~H~GapK~WY~VP~~~~~--kfE~l~~~~~~~~~~~~~~~~~~L~h~~~~isP~ 300 (466)
=|+++|+.+|.+.+|++-......+++..| -|.||-+||.... .++..... . +...++ +.
T Consensus 298 rf~lmg~~gS~Td~HiD~~gts~w~~v~~G-rK~w~L~PPt~~nl~~y~~w~~s--~--------------~~~~wf-gd 359 (528)
T 3pur_A 298 QFCLAGMAGSYTDFHVDFGGSSVYYHILKG-EKIFYIAAPTEQNFAAYQAHETS--P--------------DTTTWF-GD 359 (528)
T ss_dssp SEEEEECTTEEEEEECCGGGCEEEEEEEEE-EEEEEEECCCHHHHHHHHHHHHS--S--------------CCSCCG-GG
T ss_pred EEEEEeCCCCCCCeeECCCCCceeEEEecc-eEEEEEeCCCccchhhhhhhccC--C--------------chhhhh-cc
Confidence 479999999999999998877777777777 8999999997643 22222210 0 011111 11
Q ss_pred hHhcCCCCcceeeccCCcEEEEcCCcceeeeccccceehhhcccCchhHHHHHH
Q 039624 301 VFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKD 354 (466)
Q Consensus 301 ~L~~~GIpv~r~vQ~pGEfVvtfP~aYH~gfn~Gfn~aEavNFA~~~Wl~~g~~ 354 (466)
.+ .-.+++++|+|||.+++=.|-+|+++|.--+++..-||.+..=++....
T Consensus 360 ~l---~~~~~~v~l~pGEtlfIPsGW~HaV~tleDSIaiggNFl~~~nl~~qlr 410 (528)
T 3pur_A 360 IA---NGAVKRVVIKEGQTLLIPAGWIHAVLTPVDSLVFGGNFLHLGNLEMQMR 410 (528)
T ss_dssp GT---TTCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCGGGHHHHHH
T ss_pred cc---cccEEEEEECCCCEEEecCCceEEEecCCCeEEEcCcccchhhHHHHHH
Confidence 11 1246789999999999999999999999999999999998776665443
No 17
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=95.69 E-value=0.021 Score=57.77 Aligned_cols=113 Identities=14% Similarity=-0.004 Sum_probs=71.9
Q ss_pred CccceeeeecccCcccceeCCCCceeeEeeeeCCceeEEecChhhHHHHHHHHHHcCCCCCCCchhhhhhhcCCccccCh
Q 039624 220 VTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISP 299 (466)
Q Consensus 220 v~~P~lYiGm~~S~f~WH~ED~~l~SINY~H~GapK~WY~VP~~~~~kfE~l~~~~~~~~~~~~~~~~~~L~h~~~~isP 299 (466)
+...++++|..+|.+.+|.+.+ ..++.+-.| .|.|.-+|+.+...+- . .............++ .....---|
T Consensus 182 ~~~~~l~iG~~gs~t~~H~D~~--~n~~~qv~G-~K~~~L~pP~~~~~ly---~-~~~~~~~~~~s~vd~-~~~d~~~~p 253 (349)
T 3d8c_A 182 LTSNLLLIGMEGNVTPAHYGEQ--QNFFAQIKG-YKRCILFPPDQFECLY---P-YPVHHPCDRQSQVDF-DNPDYERFP 253 (349)
T ss_dssp EEECEEEEECTTCEEEEECCSE--EEEEEEEES-CEEEEEECGGGHHHHC---B-BCTTSTTBTBBCSCT-TSCCTTTCG
T ss_pred cccceEEEECCCCCccceECCh--hcEEEEEec-eEEEEEeCcchhhhhc---c-ccccCCCCCcccccC-CCcchhhCc
Confidence 4556799999999999999765 466666677 8999999999865331 0 000000000000000 000000112
Q ss_pred hhHhcCCCCcceeeccCCcEEEEcCCcceeeeccc-cceehhhcc
Q 039624 300 EVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHG-FNCGEAANI 343 (466)
Q Consensus 300 ~~L~~~GIpv~r~vQ~pGEfVvtfP~aYH~gfn~G-fn~aEavNF 343 (466)
. + ...+...++++|||.++.=+|-+|.+.|.+ -.++.||||
T Consensus 254 ~-~--~~~~~~~~~l~pGD~LyiP~gWwH~V~~l~d~~~sisvn~ 295 (349)
T 3d8c_A 254 N-F--QNVVGYETVVGPGDVLYIPMYWWHHIESLLNGGITITVNF 295 (349)
T ss_dssp G-G--GGCCEEEEEECTTCEEEECTTCEEEEEECTTSCCEEEEEE
T ss_pred c-c--ccCCcEEEEECCCCEEEECCCCcEEEEEcCCCCcEEEEEE
Confidence 1 1 234789999999999999999999999986 456677776
No 18
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=93.96 E-value=0.041 Score=55.39 Aligned_cols=110 Identities=17% Similarity=0.050 Sum_probs=73.5
Q ss_pred ccceeeeecccCcccceeCCCCceeeEeeeeCCceeEEecChhhHHHHHHHHHHcCCC-CCCCchhhhhhhcCCccccCh
Q 039624 221 TSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYG-EEINPLVTFATLGEKTTMISP 299 (466)
Q Consensus 221 ~~P~lYiGm~~S~f~WH~ED~~l~SINY~H~GapK~WY~VP~~~~~kfE~l~~~~~~~-~~~~~~~~~~~L~h~~~~isP 299 (466)
...++++|...+.+.+|....+ .++.+-.| .|.|...|+.+...+-. .+.. ..++ +.....-.-|
T Consensus 167 ~~s~l~~g~~g~~~~~H~D~~~--n~~~qv~G-~K~w~L~pP~~~~~ly~----~~~~~~~~d-------~~~~d~~~~p 232 (338)
T 3al5_A 167 FSSVFRISSPGLQLWTHYDVMD--NLLIQVTG-KKRVVLFSPRDAQYLYL----KGTKSEVLN-------IDNPDLAKYP 232 (338)
T ss_dssp EEEEEEEECTTCEEEEECCSSE--EEEEECSS-CEEEEEECGGGGGGGTE----ETTEESCCC-------SSSCCTTTCT
T ss_pred ccceeEECCCCCCccceECCcc--cEEEEEEE-EEEEEEECccccccccc----CCCCccccc-------CCCcchhhCc
Confidence 3468999999999999997753 44455566 89999999987543200 0000 0000 0000000112
Q ss_pred hhHhcCCCCcceeeccCCcEEEEcCCcceeeeccccceehhhcccCch
Q 039624 300 EVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPE 347 (466)
Q Consensus 300 ~~L~~~GIpv~r~vQ~pGEfVvtfP~aYH~gfn~Gfn~aEavNFA~~~ 347 (466)
. +. +.+...++++|||.+++=+|-+|.+.|.+.+++.+++|....
T Consensus 233 ~-~~--~~~~~~~~L~pGD~LyiP~gWwH~v~~l~~sisvn~~~~~~~ 277 (338)
T 3al5_A 233 L-FS--KARRYECSLEAGDVLFIPALWFHNVISEEFGVGVNIFWKHLP 277 (338)
T ss_dssp T-GG--GCCEEEEEECTTCEEEECTTCEEEEEESSCEEEEEEEECSSC
T ss_pred c-cc--cCCCEEEEECCCCEEEECCCCeEEEeeCCCEEEEEEEecCCc
Confidence 2 12 246889999999999999999999999999998888886543
No 19
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=84.08 E-value=5.2 Score=40.09 Aligned_cols=117 Identities=17% Similarity=0.143 Sum_probs=71.7
Q ss_pred ceeeeecccCcccceeCCCCceeeEeeeeCCceeEEec-ChhhHHHHHHHHHHcCCCCCC--CchhhhhhhcCCccccCh
Q 039624 223 PMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGV-PMEAANAFEEVVRVHGYGEEI--NPLVTFATLGEKTTMISP 299 (466)
Q Consensus 223 P~lYiGm~~S~f~WH~ED~~l~SINY~H~GapK~WY~V-P~~~~~kfE~l~~~~~~~~~~--~~~~~~~~L~h~~~~isP 299 (466)
+.+|+|-..+.+..|..+++ .+..+-.| .|.|... |+.....+ +.... .+....+......-- -|
T Consensus 143 ~~~~~gp~g~~~~~H~D~~d--nfl~Qv~G-~Krw~L~~~P~~~~~l--------~~~~~~~~~~~~~~~~~~~~~~-~p 210 (342)
T 1vrb_A 143 AIVYAAKNGGGFKAHFDAYT--NLIFQIQG-EKTWKLAKNENVSNPM--------QHYDLSEAPYYPDDLQSYWKGD-PP 210 (342)
T ss_dssp EEEEEECSSCCCCSEECSSE--EEEEEEES-CEEEEEECCSSCSSCS--------SCEECC----CCHHHHHHCCSC-CC
T ss_pred ceEEEeCCCCCCCCeECChh--cEEEEEEE-EEEEEEecCCcccccc--------Ccccccccccccccccccchhh-cc
Confidence 44899988899999998765 23333346 8999999 77632100 10000 000000000000000 01
Q ss_pred hhHhcCCCCcceeeccCCcEEEEcCCcceeeeccc--cceehhhcccCchhHHHHHHHH
Q 039624 300 EVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHG--FNCGEAANIATPEWLNIAKDAA 356 (466)
Q Consensus 300 ~~L~~~GIpv~r~vQ~pGEfVvtfP~aYH~gfn~G--fn~aEavNFA~~~Wl~~g~~a~ 356 (466)
. + ...+...++-+|||.++.=+|.+|.+.+.| -+++-+++ .++|.++...+.
T Consensus 211 ~-~--~~~~~~~~~L~pGD~LyiP~gwwH~v~s~~~~~slsvsi~--~~~~~dll~~~l 264 (342)
T 1vrb_A 211 K-E--DLPDAEIVNLTPGTMLYLPRGLWHSTKSDQATLALNITFG--QPAWLDLMLAAL 264 (342)
T ss_dssp C-T--TCCSSEEEEECTTCEEEECTTCEEEEECSSCEEEEEEEEC--CCBHHHHHHHHH
T ss_pred c-c--ccCCceEEEECCCcEEEeCCCccEEEEECCCCceEEEEEC--CCcHHHHHHHHH
Confidence 1 1 226788999999999999999999999993 67777777 789998876554
No 20
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=69.07 E-value=14 Score=39.12 Aligned_cols=107 Identities=17% Similarity=0.159 Sum_probs=74.1
Q ss_pred cceeeeecccC-cccceeCCCCceeeEeeeeCCceeEEecChhhHHHHHHHHHHcCCCCCCCchhhhhhhcCCccccChh
Q 039624 222 SPMVYIAMLFS-WFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPE 300 (466)
Q Consensus 222 ~P~lYiGm~~S-~f~WH~ED~~l~SINY~H~GapK~WY~VP~~~~~kfE~l~~~~~~~~~~~~~~~~~~L~h~~~~isP~ 300 (466)
.-.+|++-.+| .|.-|..+++. +...-.| .|.|...++.+... . +... ...-+.+.
T Consensus 165 ~~N~Y~tp~Gs~g~~pH~D~~Dv--FllQv~G-~KrWrL~~P~~~~~-------~-lp~~------------~~~~~~~~ 221 (489)
T 4diq_A 165 GSNVYLTPPNSQGFAPHYDDIEA--FVLQLEG-RKLWRVYRPRAPTE-------E-LALT------------SSPNFSQD 221 (489)
T ss_dssp EEEEEEECSSBCCSCCBCCSSEE--EEEEEEE-CEEEEEECCSSGGG-------T-TCSS------------CCCCCCGG
T ss_pred cceEEecCCCcccccCccCCcce--EEEEEee-EEEEEEeCCCCccc-------c-CCCc------------ccccCCcc
Confidence 34589998887 46889999875 3345556 79999998876331 0 1000 00011121
Q ss_pred hHhcCCCCcceeeccCCcEEEEcCCcceeeecc--ccceehhhcccC-chhHHHHHH
Q 039624 301 VFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSH--GFNCGEAANIAT-PEWLNIAKD 354 (466)
Q Consensus 301 ~L~~~GIpv~r~vQ~pGEfVvtfP~aYH~gfn~--Gfn~aEavNFA~-~~Wl~~g~~ 354 (466)
+.+-++..++-+|||.++.-+|.+|.+.+. ++++.-++.+.. .+|.++...
T Consensus 222 ---~~~~p~~e~~L~pGDvLYiP~g~~H~~~s~~~~~SlhlTi~~~~~~tw~dll~~ 275 (489)
T 4diq_A 222 ---DLGEPVLQTVLEPGDLLYFPRGFIHQAECQDGVHSLHLTLSTYQRNTWGDFLEA 275 (489)
T ss_dssp ---GCCCCSEEEEECTTCEEEECTTCEEEEEBCSSCCEEEEEEEECTTCBHHHHHHH
T ss_pred ---cccCcceEEEECCCCEEEECCCCceEEEecCCCceEEEeecccCcccHHHHHHH
Confidence 246689999999999999999999999998 477777777653 689876543
No 21
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=38.41 E-value=73 Score=32.97 Aligned_cols=105 Identities=16% Similarity=0.194 Sum_probs=66.5
Q ss_pred CccceeeeecccCc-ccceeCCCCceeeEeeeeCCceeEEecChhhHHHHHHHHHHcCCCCCCCchhhhhhhcCCccccC
Q 039624 220 VTSPMVYIAMLFSW-FAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMIS 298 (466)
Q Consensus 220 v~~P~lYiGm~~S~-f~WH~ED~~l~SINY~H~GapK~WY~VP~~~~~kfE~l~~~~~~~~~~~~~~~~~~L~h~~~~is 298 (466)
.....+|+|-.++. |..|..+++. +-.+-.| .|.|...|+..- +.. +...- .
T Consensus 138 ~~~~n~y~~~~g~~g~~~H~D~~dv--f~~Qv~G-~Krw~l~~p~~p-----------l~~------------~~s~d-~ 190 (442)
T 2xdv_A 138 LVGSNVYITPAGSQGLPPHYDDVEV--FILQLEG-EKHWRLYHPTVP-----------LAR------------EYSVE-A 190 (442)
T ss_dssp CCEEEEEEECTTCBCSCSEECSSEE--EEEEEES-CEEEEEECCSST-----------TCS------------SCEEC-C
T ss_pred CcccceEECCCCCCCccceECCcce--EEEEEEe-EEEEEEccCCCC-----------ccc------------cCCCC-c
Confidence 44567899998875 5789987653 2233345 899999888640 000 00000 1
Q ss_pred hhhHhcCCCCcceeeccCCcEEEEcCCcceeeeccc---cceehhhc-ccCchhHHHHHH
Q 039624 299 PEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHG---FNCGEAAN-IATPEWLNIAKD 354 (466)
Q Consensus 299 P~~L~~~GIpv~r~vQ~pGEfVvtfP~aYH~gfn~G---fn~aEavN-FA~~~Wl~~g~~ 354 (466)
|+ +.|-+...++=+|||.++.=+|.+|.+.+.+ +++.-.+. +....|.++-.+
T Consensus 191 ~~---~~~~~~~~~~L~pGD~LYiP~g~~H~~~s~~~~~~SlhlT~~~~~~~~w~~~l~~ 247 (442)
T 2xdv_A 191 EE---RIGRPVHEFMLKPGDLLYFPRGTIHQADTPAGLAHSTHVTISTYQNNSWGDFLLD 247 (442)
T ss_dssp TT---TSCSCSEEEEECTTCEEEECTTCEEEEECCSSSCCEEEEEEEECTTCSHHHHHHH
T ss_pred hh---hcCCcceEEEECCCcEEEECCCceEEEEecCCCcceeeccccccccchHHHHHHH
Confidence 11 2356788999999999999999999998875 22222222 234678876543
No 22
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=24.11 E-value=36 Score=27.33 Aligned_cols=38 Identities=16% Similarity=0.005 Sum_probs=26.9
Q ss_pred eccCCcEEEEcCCcceeeeccccceehh--hcccCchhHH
Q 039624 313 VQNAGEFVVTFPRAYHMGFSHGFNCGEA--ANIATPEWLN 350 (466)
Q Consensus 313 vQ~pGEfVvtfP~aYH~gfn~Gfn~aEa--vNFA~~~Wl~ 350 (466)
.-.||++++.-|+.-|+..|.|-.-.+. +.+..+.++-
T Consensus 69 ~l~~Gd~i~ip~~~~H~~~~~~~~~~~~l~i~~~~~~~~~ 108 (117)
T 2b8m_A 69 NYKEGNIVYVPFNVKMLIQNINSDILEFFVVKAPHPKKLN 108 (117)
T ss_dssp EEETTCEEEECTTCEEEEECCSSSEEEEEEEECSCGGGGC
T ss_pred EeCCCCEEEECCCCcEEeEcCCCCCEEEEEEECCCCCCCC
Confidence 4578999999999999999988653333 3334455443
Done!