Query 039625
Match_columns 238
No_of_seqs 162 out of 1314
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 19:58:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039625.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039625hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3abz_A Beta-glucosidase I; gly 100.0 8.6E-51 3E-55 400.1 15.4 221 8-237 131-634 (845)
2 3zyz_A Beta-D-glucoside glucoh 100.0 8.2E-50 2.8E-54 387.7 12.6 217 8-236 143-493 (713)
3 3rrx_A EXO-1,3/1,4-beta-glucan 100.0 1.8E-48 6.2E-53 380.5 13.7 221 9-236 192-542 (822)
4 2x41_A Beta-glucosidase; hydro 100.0 2.2E-48 7.5E-53 378.8 13.5 215 9-237 149-511 (721)
5 1x38_A Beta-D-glucan exohydrol 100.0 2.3E-47 7.8E-52 365.2 11.0 218 9-236 176-535 (602)
6 3bmx_A Uncharacterized lipopro 100.0 9.7E-43 3.3E-47 335.2 6.1 216 9-236 207-572 (642)
7 3sql_A Glycosyl hydrolase fami 100.0 4.8E-32 1.6E-36 254.3 8.1 143 9-161 181-411 (535)
8 3tev_A Glycosyl hyrolase, fami 99.8 2.3E-22 7.9E-27 180.5 2.2 77 9-87 164-256 (351)
9 4gvf_A Beta-hexosaminidase; TI 99.8 2E-21 6.9E-26 174.1 1.0 80 8-87 148-242 (349)
10 2oxn_A Beta-hexosaminidase; TI 99.8 5E-21 1.7E-25 171.2 -1.0 79 8-87 145-236 (340)
11 4g6c_A Beta-hexosaminidase 1; 99.8 2.3E-20 7.7E-25 167.3 0.8 78 8-87 161-253 (348)
12 4hs4_A Chromate reductase; tri 64.8 13 0.00044 29.6 6.0 56 164-230 62-122 (199)
13 5mdh_A Malate dehydrogenase; o 61.1 6.6 0.00023 34.2 3.8 58 171-232 75-134 (333)
14 3ldh_A Lactate dehydrogenase; 60.3 5.3 0.00018 34.9 3.0 55 173-232 87-143 (330)
15 2hpv_A FMN-dependent NADH-azor 60.0 12 0.00041 29.4 4.9 57 164-231 83-154 (208)
16 3p0r_A Azoreductase; structura 59.3 15 0.00052 29.3 5.5 56 165-231 82-152 (211)
17 2x0j_A Malate dehydrogenase; o 59.0 1.9 6.5E-05 37.1 -0.1 56 172-232 66-123 (294)
18 1t5b_A Acyl carrier protein ph 58.7 16 0.00055 28.2 5.4 54 166-230 77-145 (201)
19 3lcm_A SMU.1420, putative oxid 57.7 13 0.00043 29.4 4.6 55 164-229 62-131 (196)
20 3vku_A L-LDH, L-lactate dehydr 57.2 5.9 0.0002 34.5 2.7 56 172-232 73-130 (326)
21 4h7p_A Malate dehydrogenase; s 56.1 2.4 8.1E-05 37.3 0.0 56 171-232 96-155 (345)
22 3u7i_A FMN-dependent NADH-azor 55.5 20 0.00068 29.0 5.6 56 165-231 84-155 (223)
23 3ha2_A NADPH-quinone reductase 51.8 23 0.00077 27.7 5.2 54 166-230 42-105 (177)
24 1oju_A MDH, malate dehydrogena 51.7 3.1 0.00011 35.6 0.0 56 172-232 66-123 (294)
25 3hhp_A Malate dehydrogenase; M 51.1 4.3 0.00015 35.1 0.8 57 171-232 65-123 (312)
26 3fvw_A Putative NAD(P)H-depend 50.9 31 0.0011 26.9 5.9 55 163-228 55-121 (192)
27 3svl_A Protein YIEF; E. coli C 49.3 38 0.0013 26.6 6.2 56 163-229 60-120 (193)
28 1rli_A Trp repressor binding p 49.2 36 0.0012 25.7 6.0 54 165-229 61-127 (184)
29 3tl2_A Malate dehydrogenase; c 48.9 3.8 0.00013 35.4 0.2 56 172-232 75-132 (315)
30 3pqe_A L-LDH, L-lactate dehydr 48.6 3.7 0.00013 35.7 0.0 56 172-232 70-127 (326)
31 3dnf_A ISPH, LYTB, 4-hydroxy-3 48.6 1.2E+02 0.004 26.0 9.5 102 116-236 124-253 (297)
32 4aj2_A L-lactate dehydrogenase 48.6 5.8 0.0002 34.6 1.2 56 172-232 84-141 (331)
33 3nep_X Malate dehydrogenase; h 47.8 3.9 0.00013 35.4 0.0 56 172-232 66-123 (314)
34 7mdh_A Protein (malate dehydro 47.4 5.6 0.00019 35.4 1.0 57 170-232 103-163 (375)
35 3f2v_A General stress protein 45.6 24 0.0008 28.0 4.4 54 166-230 49-113 (192)
36 1d4a_A DT-diaphorase, quinone 45.1 36 0.0012 28.3 5.7 55 164-229 82-151 (273)
37 1rtt_A Conserved hypothetical 45.1 22 0.00075 27.5 4.1 55 164-229 61-120 (193)
38 1s4d_A Uroporphyrin-III C-meth 45.1 52 0.0018 27.4 6.7 32 148-181 15-46 (280)
39 3gvi_A Malate dehydrogenase; N 45.0 6.3 0.00022 34.2 0.9 56 172-232 72-129 (324)
40 3fi9_A Malate dehydrogenase; s 43.8 3.5 0.00012 36.2 -0.9 58 171-232 72-131 (343)
41 3r6w_A FMN-dependent NADH-azor 42.9 35 0.0012 26.8 5.1 53 166-229 78-149 (212)
42 3h0u_A Putative enoyl-COA hydr 42.3 55 0.0019 27.5 6.5 64 164-229 37-114 (289)
43 1mld_A Malate dehydrogenase; o 41.6 15 0.00052 31.4 2.8 56 172-232 65-122 (314)
44 3tem_A Ribosyldihydronicotinam 40.9 49 0.0017 26.7 5.8 55 164-229 81-150 (228)
45 3k1y_A Oxidoreductase; structu 39.3 38 0.0013 26.7 4.7 55 164-229 74-130 (191)
46 2amj_A Modulator of drug activ 39.3 63 0.0022 25.4 6.1 54 166-230 61-140 (204)
47 1sqs_A Conserved hypothetical 39.1 38 0.0013 27.3 4.8 55 164-229 68-128 (242)
48 1ez4_A Lactate dehydrogenase; 38.3 13 0.00043 32.0 1.8 53 173-232 70-126 (318)
49 3u7r_A NADPH-dependent FMN red 37.9 85 0.0029 24.6 6.6 55 164-229 56-116 (190)
50 1smk_A Malate dehydrogenase, g 37.2 24 0.00082 30.3 3.4 57 171-232 72-130 (326)
51 4h08_A Putative hydrolase; GDS 37.0 66 0.0023 24.4 5.8 46 173-230 72-122 (200)
52 3p7m_A Malate dehydrogenase; p 36.6 7.7 0.00026 33.5 0.2 54 172-232 70-127 (321)
53 2qlc_A DNA repair protein RADC 34.8 37 0.0013 25.2 3.7 38 44-82 59-97 (126)
54 1cbf_A Cobalt-precorrin-4 tran 34.7 66 0.0023 26.8 5.8 40 138-181 13-52 (285)
55 3vtf_A UDP-glucose 6-dehydroge 33.7 71 0.0024 28.9 6.1 16 172-187 94-109 (444)
56 1ur5_A Malate dehydrogenase; o 33.6 10 0.00035 32.4 0.4 53 173-232 68-124 (309)
57 4dhe_A Probable GTP-binding pr 32.7 1.2E+02 0.0039 23.3 6.7 46 167-225 107-152 (223)
58 1ega_A Protein (GTP-binding pr 32.5 51 0.0017 27.6 4.7 41 171-225 84-124 (301)
59 2hjr_A Malate dehydrogenase; m 32.2 20 0.00067 30.9 2.0 56 172-232 79-136 (328)
60 1ldn_A L-lactate dehydrogenase 31.7 18 0.00063 30.8 1.7 53 173-232 72-128 (316)
61 2d4a_B Malate dehydrogenase; a 31.3 14 0.00048 31.6 0.9 56 172-232 64-121 (308)
62 3gfs_A FMN-dependent NADPH-azo 31.1 55 0.0019 24.7 4.3 55 164-229 52-108 (174)
63 3nbk_A Phosphopantetheine aden 30.9 1.7E+02 0.006 22.7 7.3 72 138-223 13-87 (177)
64 2ybo_A Methyltransferase; SUMT 30.5 1E+02 0.0034 25.9 6.2 32 148-181 25-56 (294)
65 2q62_A ARSH; alpha/beta, flavo 30.5 58 0.002 26.7 4.6 56 163-229 86-148 (247)
66 1wf3_A GTP-binding protein; GT 30.1 1.4E+02 0.0047 25.0 7.1 46 167-225 78-125 (301)
67 3clv_A RAB5 protein, putative; 29.9 57 0.0019 24.2 4.2 46 169-225 110-155 (208)
68 3rpe_A MDAB, modulator of drug 29.9 1.3E+02 0.0044 24.2 6.5 53 166-229 74-152 (218)
69 3qq5_A Small GTP-binding prote 28.3 1.2E+02 0.0039 27.1 6.5 46 165-225 103-148 (423)
70 1b8p_A Protein (malate dehydro 28.2 18 0.00061 31.1 1.0 58 171-232 79-138 (329)
71 3d0o_A L-LDH 1, L-lactate dehy 27.5 15 0.00053 31.4 0.5 55 173-232 72-128 (317)
72 1pzg_A LDH, lactate dehydrogen 26.9 32 0.0011 29.5 2.5 57 172-232 75-137 (331)
73 2v6b_A L-LDH, L-lactate dehydr 26.6 22 0.00077 30.1 1.4 55 173-232 65-121 (304)
74 2ppv_A Uncharacterized protein 26.5 45 0.0015 29.1 3.3 35 146-186 154-188 (332)
75 2p0y_A Hypothetical protein LP 26.5 40 0.0014 29.5 3.0 20 167-186 180-199 (341)
76 4fzw_C 1,2-epoxyphenylacetyl-C 26.0 1.6E+02 0.0053 24.4 6.6 21 207-229 102-122 (274)
77 3dzv_A 4-methyl-5-(beta-hydrox 25.8 1.4E+02 0.0046 25.0 6.1 46 138-185 10-68 (273)
78 2a5l_A Trp repressor binding p 25.8 1E+02 0.0036 23.3 5.2 49 170-229 66-120 (200)
79 3dz8_A RAS-related protein RAB 25.6 1.5E+02 0.005 22.1 6.0 16 169-184 89-104 (191)
80 3cs3_A Sugar-binding transcrip 25.5 1.4E+02 0.0048 23.6 6.1 38 144-181 5-44 (277)
81 3ndc_A Precorrin-4 C(11)-methy 25.2 46 0.0016 27.6 3.1 32 148-181 4-35 (264)
82 1mky_A Probable GTP-binding pr 25.2 1.8E+02 0.0062 25.5 7.3 46 167-225 73-118 (439)
83 2g5g_X Putative lipoprotein; c 25.1 82 0.0028 26.4 4.6 49 165-224 31-82 (268)
84 2xxj_A L-LDH, L-lactate dehydr 24.8 12 0.0004 32.1 -0.8 55 173-232 65-121 (310)
85 2f6q_A Peroxisomal 3,2-trans-e 24.7 2.4E+02 0.0081 23.3 7.5 62 165-229 57-132 (280)
86 3l9w_A Glutathione-regulated p 24.6 1.1E+02 0.0037 27.1 5.6 55 165-230 282-347 (413)
87 1jwy_B Dynamin A GTPase domain 24.5 64 0.0022 26.6 3.9 47 167-225 159-206 (315)
88 1hye_A L-lactate/malate dehydr 24.4 18 0.0006 30.9 0.3 54 173-232 72-127 (313)
89 3k53_A Ferrous iron transport 24.3 2.6E+02 0.0088 22.5 7.6 39 172-225 78-117 (271)
90 2o2z_A Hypothetical protein; s 24.3 40 0.0014 29.3 2.5 20 167-186 170-189 (323)
91 1y6j_A L-lactate dehydrogenase 24.0 15 0.00051 31.5 -0.3 55 173-232 72-128 (318)
92 2vzf_A NADH-dependent FMN redu 23.8 71 0.0024 24.7 3.8 54 164-228 58-113 (197)
93 4dcu_A GTP-binding protein ENG 23.8 1.4E+02 0.0047 26.5 6.2 46 167-225 94-139 (456)
94 1ve2_A Uroporphyrin-III C-meth 23.6 1.8E+02 0.0063 23.0 6.4 32 148-181 3-34 (235)
95 2zqz_A L-LDH, L-lactate dehydr 23.6 12 0.00041 32.3 -0.9 55 173-232 74-130 (326)
96 1hyh_A L-hicdh, L-2-hydroxyiso 23.3 41 0.0014 28.3 2.4 58 173-232 67-127 (309)
97 3i8s_A Ferrous iron transport 23.2 1.3E+02 0.0045 24.5 5.5 40 171-225 81-120 (274)
98 2ej5_A Enoyl-COA hydratase sub 22.7 1.9E+02 0.0064 23.5 6.4 21 207-229 85-105 (257)
99 2ewd_A Lactate dehydrogenase,; 22.7 32 0.0011 29.2 1.6 55 172-232 69-126 (317)
100 3sb2_A Protein HFQ; SM-like, R 22.7 83 0.0029 21.4 3.4 32 205-237 9-42 (79)
101 2ylb_A Protein HFQ; RNA-bindin 22.2 68 0.0023 21.5 2.8 32 205-237 10-43 (74)
102 3iev_A GTP-binding protein ERA 22.1 1.5E+02 0.0052 24.7 5.8 46 167-225 84-130 (308)
103 3f6p_A Transcriptional regulat 21.8 1.4E+02 0.0047 20.2 4.7 20 205-224 61-80 (120)
104 1t2d_A LDH-P, L-lactate dehydr 21.8 33 0.0011 29.3 1.5 54 172-232 69-131 (322)
105 3r6h_A Enoyl-COA hydratase, EC 21.8 59 0.002 26.3 3.0 21 207-229 86-106 (233)
106 1y81_A Conserved hypothetical 21.8 33 0.0011 25.5 1.3 12 148-159 15-26 (138)
107 1o6z_A MDH, malate dehydrogena 21.5 22 0.00076 30.1 0.3 55 173-232 68-124 (303)
108 1pjq_A CYSG, siroheme synthase 21.3 1.7E+02 0.0057 26.2 6.2 32 148-181 216-247 (457)
109 3iby_A Ferrous iron transport 21.3 1.4E+02 0.0049 24.1 5.3 38 173-225 81-118 (256)
110 2hjg_A GTP-binding protein ENG 21.2 1.4E+02 0.0049 26.2 5.7 45 168-225 75-119 (436)
111 3s2y_A Chromate reductase; ura 26.3 21 0.00071 28.3 0.0 56 164-230 62-122 (199)
112 3ot6_A Enoyl-COA hydratase/iso 20.8 30 0.001 28.1 1.0 18 207-225 85-102 (232)
113 1eiw_A Hypothetical protein MT 20.8 1E+02 0.0036 22.1 3.9 41 172-225 35-75 (111)
114 2vx2_A Enoyl-COA hydratase dom 20.4 2.7E+02 0.0092 23.1 7.0 63 164-229 63-137 (287)
115 1kq1_A HFQ, HOST factor for Q 20.3 75 0.0026 21.5 2.8 32 204-236 7-40 (77)
116 1iv0_A Hypothetical protein; r 20.2 1.4E+02 0.0048 20.8 4.4 54 163-222 37-90 (98)
117 2qpt_A EH domain-containing pr 20.1 90 0.0031 28.8 4.2 45 169-225 182-226 (550)
No 1
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=100.00 E-value=8.6e-51 Score=400.07 Aligned_cols=221 Identities=25% Similarity=0.365 Sum_probs=192.9
Q ss_pred cchhcccccchhhhcccccc---------cccccChHHHHhhccHHHHHHHH-hcCcceeEeecccCCCcccccCHHHHH
Q 039625 8 TSNIGLRSLVVASIILLMML---------TIRKVTKQDLEDMYQPPFKSCVK-ESHVSSVICSYNRVIGIPTCADPDLLK 77 (238)
Q Consensus 8 ~~~~G~q~~gv~~~~khf~~---------~ds~i~~~~L~e~~l~PF~~ai~-~g~~~~VM~sy~~vng~pa~~s~~ll~ 77 (238)
.-|+|+|+.||++|.|||+. .|+++|+++|+|+||+||++||+ +| +++||||||++||+|||+|+++|+
T Consensus 131 a~v~GlQ~~gV~a~~KHFpg~g~e~~r~~~~~~v~~~~L~e~~L~PF~~ai~~ag-~~~VM~syn~ing~pa~~s~~ll~ 209 (845)
T 3abz_A 131 SVVKGMQGEGIAATVKHFVCNDLEDQRFSSNSIVSERALREIYLEPFRLAVKHAN-PVCIMTAYNKVNGEHCSQSKKLLI 209 (845)
T ss_dssp HHHHHHHHTTCBCEEEEETTCCCCTTTTTCEEECCHHHHHHTTSHHHHHHHHHHC-CSEEEECSSEETTEEGGGCHHHHT
T ss_pred HHHHHHhhCCeeEEeeccccCCcccCCccccCCCCHHHHHHhhHHHHHHHHHhcC-CCEEEecCCCcCCEeccCCHHHHH
Confidence 35899999999999999973 57789999999999999999996 56 569999999999999999999999
Q ss_pred HHHHHhhhhh-----------------------------------------------------------HHHHHHhc---
Q 039625 78 GVIKSQWGLD-----------------------------------------------------------WLKNMRLG--- 95 (238)
Q Consensus 78 ~lLR~elgF~-----------------------------------------------------------L~~k~~~G--- 95 (238)
++||+||||+ |++|+++|
T Consensus 210 ~lLR~e~GF~G~VvSD~~~~~~~~~Al~AG~D~~m~~~~~~~~~~~l~~av~~G~~i~~~~id~av~RIL~~k~~~g~l~ 289 (845)
T 3abz_A 210 DILRDEWKWDGMLMSDWFGTYTTAAAIKNGLDIEFPGPTRWRTRALVSHSLNSREQITTEDVDDRVRQVLKMIKFVVDNL 289 (845)
T ss_dssp CCCCCCTCCCSEEECCTTCCCCSHHHHHHTCCBBCSSSCSSCCHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHHTH
T ss_pred HHHhhccCCCeEEEcccccHHHHHHHHHcCCCcccCCchhhhHHHHHHHHHHcCccchHHHHHHHHHHHHHHHHHhCCcc
Confidence 9999999999 56789999
Q ss_pred -CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCceeccCC-CCCCCCCCCCCcEEEEccCCCchhh-----------
Q 039625 96 -FFDGDPKSQPLGNLGPSDVHTDDHKSLALDAAKQGIDSLDNK-GALPLSSNNTKNLAVIGSNANATNR----------- 162 (238)
Q Consensus 96 -~~~~~~~~~p~~~~~~~~~~~~~~~~la~~~a~~sivLLkN~-~~LPL~~~~~~~i~viG~~a~~~~~----------- 162 (238)
+|+ + |+.......+++++|+++++++|++|||||||+ ++|||++. +||+||||+|+....
T Consensus 290 ~~~~-~----p~~~~~~~~~~~~~~~~la~~~a~~sivLLKN~~~~LPL~~~--~~iaviGp~A~~~~~~Gggs~~~~~~ 362 (845)
T 3abz_A 290 EKTG-I----VENGPESTSNNTKETSDLLRKIAADSIVLLKNKNNILPLKKE--DNIIVIGPNAKAKTSSGGGSASMNSY 362 (845)
T ss_dssp HHHC-C----CTTCCCCCTTCSHHHHHHHHHHHHHHCEEEEECTTCCSCCTT--SCEEEESTTTSCCCCSCBSTTCCCBS
T ss_pred cccc-C----CccCccccccCCHHHHHHHHHHHHhCcEEeccCCcccCCCCC--CEEEEEcCCcchhhccCCCccCcccC
Confidence 888 3 332222234789999999999999999999999 89999864 799999998743100
Q ss_pred --------------------------------------------------------------------------------
Q 039625 163 -------------------------------------------------------------------------------- 162 (238)
Q Consensus 163 -------------------------------------------------------------------------------- 162 (238)
T Consensus 363 ~~vtpl~gi~~~~~~~v~y~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (845)
T 3abz_A 363 YVVSPYEGIVNKLGKEVDYTVGAYSHKSIGGLAESSLIDAAKPADAENSGLIAKFYSNPVEERSDDEEPFHVTKVNRSNV 442 (845)
T ss_dssp CCCCHHHHHHHHHTSCCEEECCCCCCSSCCBSGGGEESSTTSCSCTTTBSEEEEEESSCTTTSCTTCCCSEEEEECSSEE
T ss_pred CcCCHHHHHHHhhcCceeeccccccccccccccccccccccccccCCCCceEEEEeccCcccCcccccceeeeeccccce
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 039625 163 -------------------------------------------------------------------------------- 162 (238)
Q Consensus 163 -------------------------------------------------------------------------------- 162 (238)
T Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~l~idg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 522 (845)
T 3abz_A 443 HLFDFKHEKVDPKNPYFFVTLTGQYVPQEDGDYIFSLQVYGSGLFYLNDELIIDQKHNQERGSFCFGAGTKERTKKLTLK 522 (845)
T ss_dssp ECTTCCCTTSBTTBCCCEEEEEEEECCSSSEEEEEEEEEESEEEEEETTEEEEEESSSCCBCSTTTTTSBCCEEEEEEEC
T ss_pred eecccccccccccccceeEEEEEEEecCCCccEEEEEeecCceEEEECCEEEeeccccccccccccccCcccceeEEEec
Confidence
Q ss_pred --------------------------------------hHHHHHHHHHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHH
Q 039625 163 --------------------------------------RLLIEQAAKAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGY 204 (238)
Q Consensus 163 --------------------------------------~~~~~~a~~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~ 204 (238)
...+++|+++|++||+||||+|.++.+|+||.||.+|.||+.
T Consensus 523 ~g~~y~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Av~~A~~ADvvVv~vG~~~~~e~Eg~DR~~l~LP~~ 602 (845)
T 3abz_A 523 KGQVYNVRVEYGSGPTSGLVGEFGAGGFQAGVIKAIDDDEEIRNAAELAAKHDKAVLIIGLNGEWETEGYDRENMDLPKR 602 (845)
T ss_dssp TTCCEEEEEEEECTTTSCCSSCCCCCEEEEEEEECCCHHHHHHHHHHHHHTSSEEEEEEECCTTTSBTTBCCSSSCCCTT
T ss_pred CCceeeEEEEeccCCcccccccccccceeecccccccchhhHHHHHHHHhcCCEEEEEEecCCccccccCCcccccCCHH
Confidence 023567889999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCCceEEEEecCceeecCCCcC
Q 039625 205 QEKLVMEVANATKGTMILVVMAAGNVDVSFCKD 237 (238)
Q Consensus 205 q~~li~~l~~~~~~~vVvV~~~g~P~~l~~~~~ 237 (238)
|++||++|+++ ++|||||+++|+|++|+|+++
T Consensus 603 Q~~LI~aV~a~-~~~tVVVl~sG~pv~m~w~~~ 634 (845)
T 3abz_A 603 TNELVRAVLKA-NPNTVIVNQSGTPVEFPWLED 634 (845)
T ss_dssp HHHHHHHHHHH-CSCEEEEEECSSCCCCTTGGG
T ss_pred HHHHHHHHHHh-CCCEEEEEeCCCcccCcchhc
Confidence 99999999985 568999999999999999863
No 2
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=100.00 E-value=8.2e-50 Score=387.66 Aligned_cols=217 Identities=29% Similarity=0.356 Sum_probs=185.8
Q ss_pred cchhcccccchhhhcccccc---------cccccChHHHHhhccHHHHHHHHhcCcceeEeecccCCCcccccCHHHHHH
Q 039625 8 TSNIGLRSLVVASIILLMML---------TIRKVTKQDLEDMYQPPFKSCVKESHVSSVICSYNRVIGIPTCADPDLLKG 78 (238)
Q Consensus 8 ~~~~G~q~~gv~~~~khf~~---------~ds~i~~~~L~e~~l~PF~~ai~~g~~~~VM~sy~~vng~pa~~s~~ll~~ 78 (238)
..|+|+|+.||++|.|||+. .++++++|+|+|+||+||++||++|. ++||||||++||+|+|.|+++|++
T Consensus 143 a~v~Glq~~gV~a~~KHF~g~g~e~~r~~~~~~v~~~~l~e~~l~pF~~ai~ag~-~~VM~syn~vng~pa~~s~~ll~~ 221 (713)
T 3zyz_A 143 QTINGIQSVGVQATAKHYILNEQELNRETISSNPDDRTLHELYTWPFADAVQANV-ASVMCSYNKVNTTWACEDQYTLQT 221 (713)
T ss_dssp HHHHHHHHTTCEEEEEEETTCCCSTTTTTCEECCCHHHHHHTTTHHHHHHHHTTC-SEEEECSSEETTEEGGGCHHHHCC
T ss_pred HHHHHHhhCCeEEEEecCccCCccccCccccCcCCHHHHHHhhhHHHHHHHHcCC-CeEEeeccccCCccCcCCHHHHHH
Confidence 35899999999999999973 46679999999999999999999886 599999999999999999999999
Q ss_pred HHHHhhhhh--------------------------------------------------------------HHHHHHhcC
Q 039625 79 VIKSQWGLD--------------------------------------------------------------WLKNMRLGF 96 (238)
Q Consensus 79 lLR~elgF~--------------------------------------------------------------L~~k~~~G~ 96 (238)
+||+||||+ |++|+++|+
T Consensus 222 iLR~e~GF~G~VvSD~~a~~~~~~ai~AG~D~~m~~~~~~~~~~~~~~~l~~av~~G~i~~~~id~av~RIL~~k~~lg~ 301 (713)
T 3zyz_A 222 VLKDQLGFPGYVMTDWNAQHTTVQSANSGLDMSMPGTDFNGNNRLWGPALTNAVNSNQVPTSRVDDMVTRILAAWYLTGQ 301 (713)
T ss_dssp CCCCCSCCCSEEEESTTCCCCSHHHHHHTCCBBSSSSCTTSCCCCSTHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHcCCCEEEEecCccHHHHHHHHHcCCCEeCCCCcccchhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhCC
Confidence 999999999 678999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCceeccCC-CCCCCCCCCCCcEEEEccCCCchh--------------
Q 039625 97 FDGDPKSQPLGNLGPSDVHTDDHKSLALDAAKQGIDSLDNK-GALPLSSNNTKNLAVIGSNANATN-------------- 161 (238)
Q Consensus 97 ~~~~~~~~p~~~~~~~~~~~~~~~~la~~~a~~sivLLkN~-~~LPL~~~~~~~i~viG~~a~~~~-------------- 161 (238)
|+. +. |.... ....+++|+++++++|++|||||||+ ++|||++. +||+||||+|+...
T Consensus 302 ~~~-~~--~~~~~--~~~~~~~h~~la~~~a~~sivLLKN~~~~LPL~~~--~~IaViG~~A~~~~~G~~~~~~~~~~~~ 374 (713)
T 3zyz_A 302 DQA-GY--PSFNI--SRNVQGNHKTNVRAIARDGIVLLKNDANILPLKKP--ASIAVVGSAAIIGNHARNSPSCNDKGCD 374 (713)
T ss_dssp TST-TC--CCCCT--TSCCCTTTHHHHHHHHHHTCEEEEEGGGCCSCCCC--SEEEEESGGGSCCTTTTTCTTSGGGCCC
T ss_pred ccc-CC--CCccc--ccccCHHHHHHHHHhhhcceEEEccCCCccccCCC--CEEEEECCCccccccccccccccccccc
Confidence 973 22 22221 12247899999999999999999999 89999875 89999999886210
Q ss_pred ----------------h-----------------------hHHHHHHHHHhCCCCEEEEEeeCCCCccccCC--------
Q 039625 162 ----------------R-----------------------RLLIEQAAKAAGTADVVVMVVGLDQSIEAEGL-------- 194 (238)
Q Consensus 162 ----------------~-----------------------~~~~~~a~~~a~~aD~vIv~~g~~~~~~~eg~-------- 194 (238)
. ...+++|++.|+++|++||++|. +++||.
T Consensus 375 ~~~~~~g~gs~~~~~~~~~t~~~~i~~~~~~~g~~v~~~~~~~~~~a~~~A~~aDv~Iv~vg~---~~gEg~~~~~g~~g 451 (713)
T 3zyz_A 375 DGALGMGWGSGAVNYPYFVAPYDAINTRASSQGTQVTLSNTDNTSSGASAARGKDVAIVFITA---DSGEGYITVEGNAG 451 (713)
T ss_dssp CSSCCCCBSTTCCCCSCCCCHHHHHHHHHHTTTCEEEEECSCCHHHHHHHHTTCSEEEEEEEE---CCBCTTCCBTTBCS
T ss_pred cCceecccCCCCcCcCCCCCHHHHHHHHhccCCeEEEEeCCccHHHHHHHhhcCCEEEEEecc---cCCCCccccccCCC
Confidence 0 11356788999999999999994 456776
Q ss_pred CCCCCCCCHHHHHHHHHHHhhCCCceEEEEecCceeec-CCCc
Q 039625 195 DKENLTLHGYQEKLVMEVANATKGTMILVVMAAGNVDV-SFCK 236 (238)
Q Consensus 195 Dr~~l~l~~~q~~li~~l~~~~~~~vVvV~~~g~P~~l-~~~~ 236 (238)
||.+|.||+.|++||++|+++ ++|||||+++|+|++| +|++
T Consensus 452 DR~~l~Lp~~Q~~Li~~v~~~-~~~~VVVl~sG~p~~~~~w~~ 493 (713)
T 3zyz_A 452 DRNNLDPWHNGNALVQAVAGA-NSNVIVVVHSVGAIILEQILA 493 (713)
T ss_dssp SCSCSSCSTTHHHHHHHHHHH-CSCEEEEEEESSCCCCHHHHT
T ss_pred CcccccCChhHHHHHHHHHHh-CCCeEEEEecCCcccchhhhh
Confidence 999999999999999999985 5789999999999999 8986
No 3
>3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A
Probab=100.00 E-value=1.8e-48 Score=380.45 Aligned_cols=221 Identities=22% Similarity=0.300 Sum_probs=185.4
Q ss_pred chhccccc---------chhhhcccccc----------cccccChHHHHhhccHHHHHHHHhcCcceeEeecccCCCccc
Q 039625 9 SNIGLRSL---------VVASIILLMML----------TIRKVTKQDLEDMYQPPFKSCVKESHVSSVICSYNRVIGIPT 69 (238)
Q Consensus 9 ~~~G~q~~---------gv~~~~khf~~----------~ds~i~~~~L~e~~l~PF~~ai~~g~~~~VM~sy~~vng~pa 69 (238)
.|+|+|+. ||++|.|||+. .++++++++|+|+||+||++||++|. .+||||||.+||+|+
T Consensus 192 ~V~GlQ~~~~~~~~~~~gV~a~~KHFpG~G~~~~~r~~~~~~vs~~~L~e~~L~PF~~aI~ag~-~sVM~syn~vng~pa 270 (822)
T 3rrx_A 192 MVTGIQGDVGADFLKGSNRIATAKHFVGDGGTERGVDRGNTLIDEKGLRDIHSAGYFSAINQGV-QSVMASFNSWNGKRV 270 (822)
T ss_dssp HHHHHHCCSSTTTTCTTCCEEEEEEESCGGGBGGGCTTCEECCCHHHHHHTTSHHHHHHHHTTC-SEEEECSSEETTEEG
T ss_pred HHHHHhcccccccccCCCeEEEeeeccCCCccccCccCccCcCCHHHHHHHhhHHHHHHHHcCC-CEEEeccccCCCccc
Confidence 58899987 99999999972 23458999999999999999999986 599999999999999
Q ss_pred ccCHHHHHHHHHHhhhhh--------------------------------------------------------------
Q 039625 70 CADPDLLKGVIKSQWGLD-------------------------------------------------------------- 87 (238)
Q Consensus 70 ~~s~~ll~~lLR~elgF~-------------------------------------------------------------- 87 (238)
|.|+++|+++||+||||+
T Consensus 271 ~~s~~lLtdlLR~e~GF~G~VvSD~~~~~~i~~~~~ea~~~Al~AG~Dm~m~~~~~~~~~~~l~~aV~~G~i~e~rID~a 350 (822)
T 3rrx_A 271 HGDKHLLTDVLKNQLGFDGFVVSDWNAHKFVEGCDLEQCAQAINAGVDVIMVPEHFEAFYHNTVKQVKAGVIAESRINDA 350 (822)
T ss_dssp GGCHHHHTCCCCCCSCCCSEEECCTTGGGGSTTCBTTBCHHHHHHTCCBEECTTTHHHHHHHHHHHHHTTSSCHHHHHHH
T ss_pred cCCHHHHHHHHHHhcCCCeEEecccchhhhhcCChHHHHHHHHHcCCCEECCCccHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 999999999999999998
Q ss_pred ----HHHHHHhcCCCCCCCC--CCCCCCCCCCCCCHHHHHHHHHHHHhCceeccCC-CCCCCCCCCCCcEEEEccCCCch
Q 039625 88 ----WLKNMRLGFFDGDPKS--QPLGNLGPSDVHTDDHKSLALDAAKQGIDSLDNK-GALPLSSNNTKNLAVIGSNANAT 160 (238)
Q Consensus 88 ----L~~k~~~G~~~~~~~~--~p~~~~~~~~~~~~~~~~la~~~a~~sivLLkN~-~~LPL~~~~~~~i~viG~~a~~~ 160 (238)
|++|+++|+|+. |.. .|+.. ....+++++|+++++++|++|||||||+ ++|||++. +||+||||+|+..
T Consensus 351 v~RIL~~K~~lGLfd~-p~~~~~~~~~-~~~~v~~~eh~~lAre~A~eSiVLLKN~~~~LPL~~~--~~IaViGp~A~~~ 426 (822)
T 3rrx_A 351 VRRFLRAKIRWGVFTK-SKPSARPESQ-HPQWLGAAEHRTLAREAVRKSLVLLKNNESILPIKAS--SRILVAGKGANAI 426 (822)
T ss_dssp HHHHHHHHHHHTTTTS-CCGGGSGGGS-CGGGTTCHHHHHHHHHHHHHHCEEEEEGGGCCSBCTT--SEEEEESTTTTCH
T ss_pred HHHHHHHHHHcCCCCC-CCcccccccc-cccccCCHHHHHHHHHHHHhceEEEecCCCccCCCCC--CeEEEEcCCccch
Confidence 678999999993 320 11211 1235789999999999999999999999 89999876 7999999999763
Q ss_pred hh-------------------------hHHHHHHHH-------------HhCCCCEEEEEeeCCCCccccCCCCCCCCCC
Q 039625 161 NR-------------------------RLLIEQAAK-------------AAGTADVVVMVVGLDQSIEAEGLDKENLTLH 202 (238)
Q Consensus 161 ~~-------------------------~~~~~~a~~-------------~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~ 202 (238)
.. -+.+.+.+. .++++|++||++|++++.|++| ||.+|.||
T Consensus 427 ~~~~Ggws~~~~G~gs~~~~~~~~~t~l~gi~~~~~~~~~~v~~~~~~~~a~~aDv~Iv~~Ge~~~~e~~g-Dr~~L~lp 505 (822)
T 3rrx_A 427 NMQAGGWSVSWQGTDNTNSDFPNATSIFSGLQSQVTKAGGKITLSESGEYTSKPDVAIVVIGEEPYAEWFG-DIELLEFQ 505 (822)
T ss_dssp HHHHCSSSSSSSCTTCCGGGSTTCBCHHHHHHHHHHHTTCEEEECTTCCCSSCCSEEEEEEECCCCCGGGG-CCSCCBTT
T ss_pred hhccCCcceeccccCCCcCCCCCCCCHHHHHHHHHHhcCCeEEEcccccccccCCeEEEEecCCcccccCC-CcccccCC
Confidence 21 123344332 2578999999999988777777 99999999
Q ss_pred ---HHHHHHHHHHHhhCCCceEEEEecCceeec-CCCc
Q 039625 203 ---GYQEKLVMEVANATKGTMILVVMAAGNVDV-SFCK 236 (238)
Q Consensus 203 ---~~q~~li~~l~~~~~~~vVvV~~~g~P~~l-~~~~ 236 (238)
+.|.+||+++++ .++|||||+++|+|+.| +|++
T Consensus 506 ~g~~~q~~Li~av~a-~g~pvVvVl~sGrP~~l~~~~~ 542 (822)
T 3rrx_A 506 HETKHALALLKQLKA-DNIPVVTVFLSGRPLWVNKELN 542 (822)
T ss_dssp TTTCHHHHHHHHHHH-TTCCEEEEEECSSCCBCHHHHH
T ss_pred CCChHHHHHHHHHHH-hCCCEEEEEeCCcceeccchhh
Confidence 579999999997 67899999999999999 5544
No 4
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=100.00 E-value=2.2e-48 Score=378.78 Aligned_cols=215 Identities=25% Similarity=0.354 Sum_probs=184.0
Q ss_pred chhcccccchhhhccccc---------ccccccChHHHHhhccHHHHHHHHhcCcceeEeecccCCCcccccCHHHHHHH
Q 039625 9 SNIGLRSLVVASIILLMM---------LTIRKVTKQDLEDMYQPPFKSCVKESHVSSVICSYNRVIGIPTCADPDLLKGV 79 (238)
Q Consensus 9 ~~~G~q~~gv~~~~khf~---------~~ds~i~~~~L~e~~l~PF~~ai~~g~~~~VM~sy~~vng~pa~~s~~ll~~l 79 (238)
-|+|+|+.||++|.|||+ ..|+|+++++|+|+||+||++||+++.+++||||||++||.|||+|+++|+++
T Consensus 149 ~v~G~q~~gV~a~~KHF~g~g~e~~r~~~ds~~~~~~l~e~~l~pF~~ai~~a~~~~vM~sy~~i~g~pa~~s~~ll~~l 228 (721)
T 2x41_A 149 FVKGVQSQGVGACIKHFVANNQETNRMVVDTIVSERALREIYLRGFEIAVKKSKPWSVMSAYNKLNGKYCSQNEWLLKKV 228 (721)
T ss_dssp HHHHHHTTTCBCEEEEETTCCCCTTTTTCEEECCHHHHHHTHHHHHHHHHHHHCCSEEEECSSEETTEEGGGCHHHHTCC
T ss_pred HHHHhhhCCeEEEecccccCCCCCCCCcccCCCCHHHHHhhhHHHHHHHHHhcCCCEEEecCCCCCCccccCCHHHHHHH
Confidence 588999999999999997 36889999999999999999999944457999999999999999999999999
Q ss_pred HHHhhhhh----------------------------------------------------------------HHHHHHhc
Q 039625 80 IKSQWGLD----------------------------------------------------------------WLKNMRLG 95 (238)
Q Consensus 80 LR~elgF~----------------------------------------------------------------L~~k~~~G 95 (238)
||+||||+ |++|+++|
T Consensus 229 LR~e~GF~G~VvSD~~~~~~~~~al~AG~D~~m~~~~~~~~~~~~~~~~~l~~av~~G~i~~~~id~av~Ril~~k~~~g 308 (721)
T 2x41_A 229 LREEWGFEGFVMSDWYAGDNPVEQLKAGNDLIMPGKAYQVNTERRDEIEEIMEALKEGKLSEEVLDECVRNILKVLVNAP 308 (721)
T ss_dssp CCCCTCCCSEEEECTTCSSCHHHHHHHTCCBBCSCCGGGTCTTCCCHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHTTSG
T ss_pred HHHhcCCCEEEEccCchHHHHHHHHHcCCCcccCCCcccccchhHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHhC
Confidence 99999998 34567788
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCceeccCCCCCCCCCCCCCcEEEEccCCCchhh-------------
Q 039625 96 FFDGDPKSQPLGNLGPSDVHTDDHKSLALDAAKQGIDSLDNKGALPLSSNNTKNLAVIGSNANATNR------------- 162 (238)
Q Consensus 96 ~~~~~~~~~p~~~~~~~~~~~~~~~~la~~~a~~sivLLkN~~~LPL~~~~~~~i~viG~~a~~~~~------------- 162 (238)
+|+. | +. ...+++++|+++++++|+||||||||+++|||++. +||+|+||++.....
T Consensus 309 l~~~-~----~~---~~~~~~~~h~~la~~~A~esiVLLKN~~~LPL~~~--~kIaviG~~A~~~~~~g~gs~~~~~~~~ 378 (721)
T 2x41_A 309 SFKN-Y----RY---SNKPDLEKHAKVAYEAGAEGVVLLRNEEALPLSEN--SKIALFGTGQIETIKGGTGSGDTHPRYA 378 (721)
T ss_dssp GGGT-C----CC---CSCCCHHHHHHHHHHHHHHHCEEEEESSCCSCCTT--CCEEEESGGGTSCCCSCBSTTCCCCSCC
T ss_pred CCCC-C----Cc---ccccCCHHHHHHHHHHHHhchhhhcCCCcCCCCCC--CEEEEEecCCcCccccCCCCCCcCcCCC
Confidence 8873 2 21 23578899999999999999999999889999875 899999997743210
Q ss_pred --------hH---------------------------H---H---------------HHHHHHhCCCCEEEEEeeCCCCc
Q 039625 163 --------RL---------------------------L---I---------------EQAAKAAGTADVVVMVVGLDQSI 189 (238)
Q Consensus 163 --------~~---------------------------~---~---------------~~a~~~a~~aD~vIv~~g~~~~~ 189 (238)
.. + + +++++.|+++|+|||++|.+
T Consensus 379 vt~~~gl~~~G~~~~~~~~v~y~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~a~~~a~~aDvvIv~vg~~--- 455 (721)
T 2x41_A 379 ISILEGIKERGLNFDEELAKTYEDYIKKMRETEEYKPRRDSWGTIIKPKLPENFLSEKEIHKLAKKNDVAVIVISRI--- 455 (721)
T ss_dssp CCHHHHHHHTTCCBCHHHHHHHHHHHHHHHHSTTTSCBC-----CBCCCCCSCCSCHHHHHHHHHHCSEEEEEEECC---
T ss_pred CCHHHHHHHhccCCCCceEEEEeecccccccccccCCCccceeccccCCCchhhhcHHHHHHHHhcCCEEEEEEecc---
Confidence 00 0 1 56777889999999999976
Q ss_pred cccCCCCC----CCCCCHHHHHHHHHHH----hhCCCceEEEEecCceeec-CCCcC
Q 039625 190 EAEGLDKE----NLTLHGYQEKLVMEVA----NATKGTMILVVMAAGNVDV-SFCKD 237 (238)
Q Consensus 190 ~~eg~Dr~----~l~l~~~q~~li~~l~----~~~~~~vVvV~~~g~P~~l-~~~~~ 237 (238)
++||.||. +|.||+.|.+||++|+ + .++|||||+++|+||+| +|+++
T Consensus 456 ~gEg~Dr~~~~~~l~Lp~~q~~LI~~v~~~~~~-~~~~vVVVl~~g~P~~l~~~~~~ 511 (721)
T 2x41_A 456 SGEGYDRKPVKGDFYLSDDETDLIKTVSREFHE-QGKKVIVLLNIGSPVEVVSWRDL 511 (721)
T ss_dssp CBTTCCCCSSBTTTBCCHHHHHHHHHHHHHHHH-TTCCEEEEEECSSCCCCTTTGGG
T ss_pred ccccccccCCCCCccCCHHHHHHHHHHHHHHHH-hCCCEEEEEecCCceEccchhhc
Confidence 78999999 9999999999999998 6 56789999999999999 88753
No 5
>1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} SCOP: c.1.8.7 c.23.11.1 PDB: 1lq2_A* 1x39_A* 1ex1_A* 1ieq_A* 1iev_A* 1iew_A* 1iex_A* 1j8v_A*
Probab=100.00 E-value=2.3e-47 Score=365.17 Aligned_cols=218 Identities=22% Similarity=0.319 Sum_probs=183.6
Q ss_pred chhcccc----------------cchhhhcccccc----------cccccChHHHHhhccHHHHHHHHhcCcceeEeecc
Q 039625 9 SNIGLRS----------------LVVASIILLMML----------TIRKVTKQDLEDMYQPPFKSCVKESHVSSVICSYN 62 (238)
Q Consensus 9 ~~~G~q~----------------~gv~~~~khf~~----------~ds~i~~~~L~e~~l~PF~~ai~~g~~~~VM~sy~ 62 (238)
-|+|+|+ .||++|.|||+. .++++|+++|+|+||+||++||++|. .+||||||
T Consensus 176 ~v~GlQ~~~~~~~~~~~~~~~~~~gV~a~~KHFpg~g~~~~~~~~~~~~~~~~~l~e~~l~pF~~ai~ag~-~~vM~sy~ 254 (602)
T 1x38_A 176 LIPGLQGDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTVDGINENNTIINREGLMNIHMPAYKNAMDKGV-STVMISYS 254 (602)
T ss_dssp HHHHHHCCCCTTCCTTCCCCCSTTSCBCEEEEETTGGGCGGGCTTCEECCCHHHHHHHTSHHHHHHHHTTC-CEEEECSS
T ss_pred HHHHhcCCCccccccccccccccCCeEEEeccccCCCccccCcccccCcCCHHHHHHHHHHHHHHHHHcCC-CEEEeccc
Confidence 6899999 499999999973 23568999999999999999999985 69999999
Q ss_pred cCCCcccccCHHHHHHHHHHhhhhh-------------------------------------------------------
Q 039625 63 RVIGIPTCADPDLLKGVIKSQWGLD------------------------------------------------------- 87 (238)
Q Consensus 63 ~vng~pa~~s~~ll~~lLR~elgF~------------------------------------------------------- 87 (238)
.+||+|+|.|+++|+++||+||||+
T Consensus 255 ~v~g~pa~~s~~ll~~lLR~e~GF~G~VvSD~~~~~~~~~~~~~~~~~a~~~al~AG~D~~m~~~~~~~~~~~l~~av~~ 334 (602)
T 1x38_A 255 SWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDRITTPAGSDYSYSVKASILAGLDMIMVPNKYQQFISILTGHVNG 334 (602)
T ss_dssp EETTEEGGGCHHHHCCCCCTTSCCCSEEECCTTTTGGGSSSTTTTHHHHHHHHHHHTCCBEECCSCHHHHHHHHHHHHHT
T ss_pred ccCCccccCCHHHHHHHhhcccCCCeEEEccchHHHHHHhhcCCCHHHHHHHHHHcCCCcccCCcchhhHHHHHHHHHhc
Confidence 9999999999999999999999998
Q ss_pred ---------------HHHHHHhcCCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHhCceeccCCC------CCCCCCC
Q 039625 88 ---------------WLKNMRLGFFDGDPKSQPLGNLG-PSDVHTDDHKSLALDAAKQGIDSLDNKG------ALPLSSN 145 (238)
Q Consensus 88 ---------------L~~k~~~G~~~~~~~~~p~~~~~-~~~~~~~~~~~la~~~a~~sivLLkN~~------~LPL~~~ 145 (238)
|++|+++|+|+ + ||.+.. ...+++++|+++++++|++|||||||++ +|||++.
T Consensus 335 G~i~~~~id~av~RiL~~k~~~glf~-~----p~~~~~~~~~~~~~~~~~la~~~a~~sivLLKN~~~~~~~~~LPL~~~ 409 (602)
T 1x38_A 335 GVIPMSRIDDAVTRILRVKFTMGLFE-N----PYADPAMAEQLGKQEHRDLAREAARKSLVLLKNGKTSTDAPLLPLPKK 409 (602)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHTTTTT-C----CSCCGGGGGGTTCHHHHHHHHHHHHHHCEEEEECSSTTSCCCCSCCSC
T ss_pred CCCCHHHHHHHHHHHHHHHHHhCCCC-C----CCCCcchhhccCCHHHHHHHHHHHHhceEEeccCCCCCcccccccCCC
Confidence 67899999998 4 443321 2357899999999999999999999985 9999864
Q ss_pred CCCcEEEEccCCCchhh----------------------hHHHHH----------------HHHHhCCCCEEEEEeeCCC
Q 039625 146 NTKNLAVIGSNANATNR----------------------RLLIEQ----------------AAKAAGTADVVVMVVGLDQ 187 (238)
Q Consensus 146 ~~~~i~viG~~a~~~~~----------------------~~~~~~----------------a~~~a~~aD~vIv~~g~~~ 187 (238)
.++|+|+||+|+.... -+.+.+ +...++++|++||++|.++
T Consensus 410 -~~~iaviG~~A~~~~~~~gg~~~~~~g~~~~~~~~~t~~~~l~~~~~~~~~v~~~~~~~~~~~~a~~aD~viv~~g~~~ 488 (602)
T 1x38_A 410 -APKILVAGSHADNLGYQCGGWTIEWQGDTGRTTVGTTILEAVKAAVDPSTVVVFAENPDAEFVKSGGFSYAIVAVGEHP 488 (602)
T ss_dssp -CSEEEEESTTTTCHHHHHCSSSSSTTCCSSCCSSCBCHHHHHHHHSCTTCEEEEESSCCHHHHHHTTCSCEEEEEECCC
T ss_pred -CCEEEEEcCCCccccccCCcceeeccCCCCCCCCcccHHHHHHHHhCCCeEEEEcCCCCHHHHHHhhCCEEEEEeccCc
Confidence 4799999998875310 011111 1223789999999999888
Q ss_pred CccccCCCCCCCCCCHHHHHHHHHHHhhCCCceEEEEecCceeec-CCCc
Q 039625 188 SIEAEGLDKENLTLHGYQEKLVMEVANATKGTMILVVMAAGNVDV-SFCK 236 (238)
Q Consensus 188 ~~~~eg~Dr~~l~l~~~q~~li~~l~~~~~~~vVvV~~~g~P~~l-~~~~ 236 (238)
+.++|| ||.++.||+.|.+||+++++ ++|||||+++|+|++| +|++
T Consensus 489 ~~e~~g-dr~~l~lp~~q~~li~~v~~--~~~~VvVl~~g~P~~l~~~~~ 535 (602)
T 1x38_A 489 YTETKG-DNLNLTIPEPGLSTVQAVCG--GVRCATVLISGRPVVVQPLLA 535 (602)
T ss_dssp CCGGGG-CCSSCCCCSSSHHHHHHHHT--TSCEEEEEECSSCCCCHHHHH
T ss_pred ccccCC-CcCCcCCChhHHHHHHHHHh--CCCEEEEEeCCCceeccchhh
Confidence 889999 99999999999999999986 5789999999999999 5643
No 6
>3bmx_A Uncharacterized lipoprotein YBBD; beta-N-hexosaminidase, TIM barrel, glycos hydrolase, membrane, palmitate; HET: P4G; 1.40A {Bacillus subtilis} PDB: 3cqm_A* 3nvd_A* 3lk6_A*
Probab=100.00 E-value=9.7e-43 Score=335.21 Aligned_cols=216 Identities=12% Similarity=0.193 Sum_probs=172.0
Q ss_pred chhcccccchhhhccccc-----cccccc-------ChHHHHhhccHHHHHHHHhcCcceeEee---cccCC--------
Q 039625 9 SNIGLRSLVVASIILLMM-----LTIRKV-------TKQDLEDMYQPPFKSCVKESHVSSVICS---YNRVI-------- 65 (238)
Q Consensus 9 ~~~G~q~~gv~~~~khf~-----~~ds~i-------~~~~L~e~~l~PF~~ai~~g~~~~VM~s---y~~vn-------- 65 (238)
-|+|+|+.||++|.|||+ ..|+|. ++++|+|+||+||++||++|. ++|||| ||.+|
T Consensus 207 ~v~Glq~~gV~a~~KHFpg~g~~~~dsh~~~~~~~~~~~~l~e~~l~PF~~ai~ag~-~~VM~ah~~y~~id~~~~~~~~ 285 (642)
T 3bmx_A 207 TMKGLQRQDIASALKHFPGHGDTDVDSHYGLPLVSHGQERLREVELYPFQKAIDAGA-DMVMTAHVQFPAFDDTTYKSKL 285 (642)
T ss_dssp HHHHHHHTTCEEEEEEETCCTTCSSCTTTSCCBCCCCHHHHHHTTHHHHHHHHHTTC-CEEEECCCBCTTTCCCEEECTT
T ss_pred HHHHHHhCCceEEeccccCCCCccCCCCCCCceeccCHHHHhhhhHHHHHHHHHcCC-CEEEEccccccccCcccccccc
Confidence 588999999999999997 457764 899999999999999999986 699999 67788
Q ss_pred -----CcccccCHHHHHHHHHHhhhhh-----------------------------------------------------
Q 039625 66 -----GIPTCADPDLLKGVIKSQWGLD----------------------------------------------------- 87 (238)
Q Consensus 66 -----g~pa~~s~~ll~~lLR~elgF~----------------------------------------------------- 87 (238)
|.|||+|+++|+++||+||||+
T Consensus 286 ~g~~~g~pa~~s~~ll~~lLR~e~GF~G~VvSD~~~m~ai~~~~~~~~a~~~Al~AG~D~~l~~~~~~~~~~~~~~~~~~ 365 (642)
T 3bmx_A 286 DGSDILVPATLSKKVMTGLLRQEMGFNGVIVTDALNMKAIADHFGQEEAVVMAVKAGVDIALMPASVTSLKEEQKFARVI 365 (642)
T ss_dssp TSCEEECBGGGCHHHHCCCCCCCSCCCSEEECSCTTSHHHHTTSCHHHHHHHHHHHTCSBEESCSCCCSGGGTHHHHHHH
T ss_pred ccccCcccccCCHHHHHHHhhCcCCCCEEEEeCchhhHHHHhcCCHHHHHHHHHHcCCCEecccccccccccchhHHHHH
Confidence 7899999999999999999998
Q ss_pred ------------------------HHHHHHhcCCCCCCCCCCCCCCC------CCCCCCHHHHHHHHHHHHhCceeccCC
Q 039625 88 ------------------------WLKNMRLGFFDGDPKSQPLGNLG------PSDVHTDDHKSLALDAAKQGIDSLDNK 137 (238)
Q Consensus 88 ------------------------L~~k~~~G~~~~~~~~~p~~~~~------~~~~~~~~~~~la~~~a~~sivLLkN~ 137 (238)
|++|+++|+|+.. ||.+.. ...+++++|+++++++|++|+|||||+
T Consensus 366 ~~l~~av~~G~i~~~~id~av~RiL~~k~~~gl~~~~----p~~~~~~~~~~~~~~~~~~~~~~la~~~a~~sivLLKN~ 441 (642)
T 3bmx_A 366 QALKEAVKNGDIPEQQINNSVERIISLKIKRGMYPAR----NSDSTKEKIAKAKKIVGSKQHLKAEKKLAEKAVTVLKNE 441 (642)
T ss_dssp HHHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCSSCC----CCCCHHHHHHHHHHHTTCHHHHHHHHHHHHHHCEEEEEG
T ss_pred HHHHHHHHcCchhHHHHHHHHHHHHHHHHHcCCCcCC----CCcccccchhhhhhhcCCHHHHHHHHHHHHhCEEEEccC
Confidence 4567889998842 343210 124789999999999999999999999
Q ss_pred -CCCCCCCCCCCcEEEEccCCCchhh--------------------------hHHHHHHHHHhCCCCEEEEEeeCCCCcc
Q 039625 138 -GALPLSSNNTKNLAVIGSNANATNR--------------------------RLLIEQAAKAAGTADVVVMVVGLDQSIE 190 (238)
Q Consensus 138 -~~LPL~~~~~~~i~viG~~a~~~~~--------------------------~~~~~~a~~~a~~aD~vIv~~g~~~~~~ 190 (238)
++|||++.+.+||+|+||++..... ...++++++.++++|+||++++......
T Consensus 442 ~~~LPL~~~~~~~iaviG~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~aDvvIv~~~~~~~~~ 521 (642)
T 3bmx_A 442 QHTLPFKPKKGSRILIVAPYEEQTASIEQTIHDLIKRKKIKPVSLSKMNFASQVFKTEHEKQVKEADYIITGSYVVKNDP 521 (642)
T ss_dssp GGCCSCCCCTTCEEEEEESSHHHHHHHHHHHHHHHHTTSSCCCEEEEEECTTCCCCHHHHHHHHHCSEEEEEECCSSCCC
T ss_pred CCcCCCCCCCCCEEEEEeCCccchhhHHHHHHHhhCCCCeeEEeccCCCCcchhhHHHHHHHHhhCCEEEEEecCCCCCc
Confidence 8999985445899999998532211 0224578888999999999665321111
Q ss_pred ccCCCCCCCCCCHHH------------HHHHHHHHhhCCCceEEEEecCceeecCCCc
Q 039625 191 AEGLDKENLTLHGYQ------------EKLVMEVANATKGTMILVVMAAGNVDVSFCK 236 (238)
Q Consensus 191 ~eg~Dr~~l~l~~~q------------~~li~~l~~~~~~~vVvV~~~g~P~~l~~~~ 236 (238)
.| ++.+|+.| .+||+++++ .++|||||. .|+||+++|++
T Consensus 522 ~e-----~~~l~~~q~~~~~~~~~~~~~~li~~~~~-~~~pvVvv~-~g~P~~l~~~~ 572 (642)
T 3bmx_A 522 VV-----NDGVIDDTISDSSKWATVFPRAVMKAALQ-HNKPFVLMS-LRNPYDAANFE 572 (642)
T ss_dssp CE-----ETTEECCCCCSSTTHHHHHHHHHHHHHHH-TTCCEEEEE-CSCGGGGGGCT
T ss_pred hh-----ccCCccccccccccccchhHHHHHHHHHH-cCCCEEEEe-cCChhcccccc
Confidence 12 34566666 899999986 778887665 69999999985
No 7
>3sql_A Glycosyl hydrolase family 3; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM-barrel, alpha-beta-alpha sandwich; HET: MSE; 2.25A {Synechococcus SP} PDB: 3sqm_A*
Probab=99.97 E-value=4.8e-32 Score=254.31 Aligned_cols=143 Identities=15% Similarity=0.182 Sum_probs=122.4
Q ss_pred chhcccccchhhhccccc-----cccccc-------ChHHHHhhccHHHHHHHHhcCcceeEeecccCC----CcccccC
Q 039625 9 SNIGLRSLVVASIILLMM-----LTIRKV-------TKQDLEDMYQPPFKSCVKESHVSSVICSYNRVI----GIPTCAD 72 (238)
Q Consensus 9 ~~~G~q~~gv~~~~khf~-----~~ds~i-------~~~~L~e~~l~PF~~ai~~g~~~~VM~sy~~vn----g~pa~~s 72 (238)
-++|+|+.||++|.|||+ ..|+|. |+++|+|+||+||+++|++|. .+|||||+.+| +.|||.|
T Consensus 181 ~v~GlQ~~gV~a~~KHFpG~G~~~~Dsh~~~~~v~~s~~~L~e~~L~PF~~aI~ag~-~sVM~ah~~v~~lD~~~PAs~S 259 (535)
T 3sql_A 181 FIRGAQQYAVLTTAKHFPGHGDTATDSHLALPTISHDDTRLNTVELPPFKAAIQGGV-DAVMNAHLMIPAWDQQYPATLS 259 (535)
T ss_dssp HHHHHTTSSCBCEEEEETCCCSCSCCTTTSCCBCCCCHHHHHHTTSHHHHHHHHTTC-SEEEECCCBBTTTBSSSCGGGC
T ss_pred HHHHHhhcccceeeeeecccCCcccCCccCCCcCCCCHHHHHHHHHHHHHHHHHcCC-CEEEecCccCCCcCCCcCcccC
Confidence 589999999999999997 456664 799999999999999999985 69999998876 4899999
Q ss_pred HHHHHHHHHHhhhhh-----------------------------------------------------------------
Q 039625 73 PDLLKGVIKSQWGLD----------------------------------------------------------------- 87 (238)
Q Consensus 73 ~~ll~~lLR~elgF~----------------------------------------------------------------- 87 (238)
+++|+++||+||||+
T Consensus 260 ~~lLtdlLR~e~GF~G~VvSD~l~m~ai~~~~~~~eaa~~Al~AG~Dm~l~~~~~~~~~~~l~~AV~~G~i~e~rId~av 339 (535)
T 3sql_A 260 PAILTGQLRHKLGFKGLIVTDALVMGGITQFAAPDTVVVQAIAAGADILLMPPDVDGAIIAIETAIKTGQLSESRIYESV 339 (535)
T ss_dssp HHHHCCCCCCCSCCCSEEECSCTTSHHHHTTSCHHHHHHHHHHHTCSBEESCSCHHHHHHHHHHHHHHTSSCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCceEEcChhHHHHHHhcCCHHHHHHHHHHCCCCeecCCCCHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 999999999999999
Q ss_pred ---HHHHHHhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhCceeccCCCCCCCC----CCCCCcEEEEccCCCch
Q 039625 88 ---WLKNMRLGFFDGDPKSQPLGNLGPSDVHTDDHKSLALDAAKQGIDSLDNKGALPLS----SNNTKNLAVIGSNANAT 160 (238)
Q Consensus 88 ---L~~k~~~G~~~~~~~~~p~~~~~~~~~~~~~~~~la~~~a~~sivLLkN~~~LPL~----~~~~~~i~viG~~a~~~ 160 (238)
|++|+++|+|+.. +... ...+++++|+++++++|++|||| +++|||+ +.+.++|+|||++++.+
T Consensus 340 ~RIL~~K~~lGl~~~~-----~~~~-~~~~~~~eh~~lA~e~A~eSiVL---~~~LPL~~~~~~~~~~~laVIG~~a~~~ 410 (535)
T 3sql_A 340 ERIWQAKQKILTATPS-----TFPQ-GISGDRPETRKTVAMVLERATKH---QKSLVKISSFPDNFARNLIVVDSVLKSP 410 (535)
T ss_dssp HHHHHHHHHHHTSCCC-----CTTT-TCCTTCHHHHHHHHHHHHHHCEE---CSSCCCCCCCSTTSEEEEEEESCGGGCT
T ss_pred HHHHHHHHHhcCCCCC-----ccch-hhccCCHHHHHHHHHHHHhCeEE---CCcCCCCcccccCCCCEEEEECCCCCCc
Confidence 6789999999742 2222 23689999999999999999999 4589998 33457999999999765
Q ss_pred h
Q 039625 161 N 161 (238)
Q Consensus 161 ~ 161 (238)
.
T Consensus 411 ~ 411 (535)
T 3sql_A 411 F 411 (535)
T ss_dssp T
T ss_pred c
Confidence 4
No 8
>3tev_A Glycosyl hyrolase, family 3; PSI-biology, midwest center for structural genomics, structu genomic, MCSG, hydrolase; 2.30A {Deinococcus radiodurans}
Probab=99.84 E-value=2.3e-22 Score=180.50 Aligned_cols=77 Identities=18% Similarity=0.364 Sum_probs=70.2
Q ss_pred chhcccccchhhhccccc-----ccccc-------cChHHHHhhccHHHHHHHHhcCcceeEee---cccCCC-cccccC
Q 039625 9 SNIGLRSLVVASIILLMM-----LTIRK-------VTKQDLEDMYQPPFKSCVKESHVSSVICS---YNRVIG-IPTCAD 72 (238)
Q Consensus 9 ~~~G~q~~gv~~~~khf~-----~~ds~-------i~~~~L~e~~l~PF~~ai~~g~~~~VM~s---y~~vng-~pa~~s 72 (238)
-++|+|+.||++|.|||+ ..|+| +++++|+|+||+||+++ ++|. .+|||| ||.+|| .|+|+|
T Consensus 164 ~v~Glq~~gV~a~~KHFpG~g~~~~dsh~~~~~~~~s~~~L~e~~l~PF~~a-~ag~-~~VM~aHi~y~~id~~~Pa~~s 241 (351)
T 3tev_A 164 ALAGHTREGVAPCAKHFPGHGDTHQDSHLALPRVSKSRAELDAGELAPFRAL-LPET-PAIMTAHIVYDALDAEHPATLS 241 (351)
T ss_dssp HHHHHHTTTCEECEEEETCCTTCBCSSTTSCCEECCCHHHHHHTTTHHHHHH-GGGC-SEEEECSCEETTTBSSSCGGGC
T ss_pred HHHHHHHcCCeEEeeeccCCCCCcCCCCcCCCcCCCCHHHHHHhhhHHHHHH-hcCC-CEEEecceEecCCCCCcCccCC
Confidence 489999999999999997 34565 48999999999999999 8886 599999 899999 699999
Q ss_pred HHHHHHHHHHhhhhh
Q 039625 73 PDLLKGVIKSQWGLD 87 (238)
Q Consensus 73 ~~ll~~lLR~elgF~ 87 (238)
+++|+++||+||||+
T Consensus 242 ~~ll~~lLR~elGF~ 256 (351)
T 3tev_A 242 PRILTGLLREEWGYD 256 (351)
T ss_dssp HHHHCCCCCCCSCCC
T ss_pred HHHHHHHHHhhcCCC
Confidence 999999999999999
No 9
>4gvf_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: NDG NAG MES; 1.35A {Salmonella enterica subsp} PDB: 4gvg_A* 4gvh_A* 4gvi_A*
Probab=99.81 E-value=2e-21 Score=174.12 Aligned_cols=80 Identities=15% Similarity=0.237 Sum_probs=71.9
Q ss_pred cchhcccccchhhhccccc-----ccccc-------cChHHHHhhccHHHHHHHHhcCcceeEee---cccCCCcccccC
Q 039625 8 TSNIGLRSLVVASIILLMM-----LTIRK-------VTKQDLEDMYQPPFKSCVKESHVSSVICS---YNRVIGIPTCAD 72 (238)
Q Consensus 8 ~~~~G~q~~gv~~~~khf~-----~~ds~-------i~~~~L~e~~l~PF~~ai~~g~~~~VM~s---y~~vng~pa~~s 72 (238)
..++|+|+.||++|.|||| ..|+| .+.++|+|+||+||+.+|++|.+.+|||| ||++||.|+|+|
T Consensus 148 a~v~Glq~~GV~a~~KHFpG~G~~~~dsh~~~~v~~~s~~el~~~~l~PF~~aI~~g~~~~VM~aHv~y~~id~~Pa~~S 227 (349)
T 4gvf_A 148 RFIDGMHDAGMKTTGKHFPGHGAVTADSHKETPCDPRPETDIRGKDMSVFRTLISENKLDAIMPAHVIYRAIDPRPASGS 227 (349)
T ss_dssp HHHHHHHHHTCCCEEEEETCCTTCCCCSSSSCCBCCCCHHHHHHTHHHHHHHHHHTTCCSEEEECSCBCTTTCSSCGGGC
T ss_pred HHHHHHHHcCceeeecccccCCCcccCCCCCCCCCCcCHHHHHHHHhHHHHHHHHcCCCCeEeecccccCCCCCCCCcCC
Confidence 3589999999999999997 34555 25678999999999999999955699999 999999999999
Q ss_pred HHHHHHHHHHhhhhh
Q 039625 73 PDLLKGVIKSQWGLD 87 (238)
Q Consensus 73 ~~ll~~lLR~elgF~ 87 (238)
+++|+++||+||||+
T Consensus 228 ~~ll~~lLR~elGF~ 242 (349)
T 4gvf_A 228 PYWLKTVLRQELGFD 242 (349)
T ss_dssp HHHHCCCCCCCTCCC
T ss_pred HHHHHHHHHHhcCCC
Confidence 999999999999998
No 10
>2oxn_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: OAN; 1.70A {Vibrio cholerae} PDB: 3gs6_A* 3gsm_A* 1y65_A* 1tr9_A
Probab=99.79 E-value=5e-21 Score=171.16 Aligned_cols=79 Identities=11% Similarity=0.197 Sum_probs=70.5
Q ss_pred cchhcccccchhhhccccc-----ccccc----cCh-HHHHhhccHHHHHHHHhcCcceeEee---cccCCCcccccCHH
Q 039625 8 TSNIGLRSLVVASIILLMM-----LTIRK----VTK-QDLEDMYQPPFKSCVKESHVSSVICS---YNRVIGIPTCADPD 74 (238)
Q Consensus 8 ~~~~G~q~~gv~~~~khf~-----~~ds~----i~~-~~L~e~~l~PF~~ai~~g~~~~VM~s---y~~vng~pa~~s~~ 74 (238)
..++|+|+.||++|.|||+ ..|+| +++ ++| |+||+||+++|++|.+.+|||| ||.+||.|+|.|++
T Consensus 145 a~v~Glq~~gV~a~~KHFpG~G~~~~dsh~~~~v~~~~~l-~~~l~PF~~ai~~g~~~~VM~aHv~y~~id~~Pa~~s~~ 223 (340)
T 2oxn_A 145 AFLRGMKAVGMATTGKHFPGHGAVIADSHLETPYDERETI-AQDMAIFRAQIEAGVLDAMMPAHVVYPHYDAQPASGSSY 223 (340)
T ss_dssp HHHHHHHHTTCCCEEEEETCCTTCCSCCSSSSCBCCCSCC-HHHHHHHHHHHHHTCCSEEEECSCBBTTTBSSCGGGCHH
T ss_pred HHHHHHHHCCceeeeccCcCCCCccCCCCCCCccCCHHHH-HHHHHHHHHHHHcCCCCeeeeccccccccCCcCcccCHH
Confidence 3589999999999999997 34555 333 889 9999999999999955699999 99999999999999
Q ss_pred HHHHHHHHhhhhh
Q 039625 75 LLKGVIKSQWGLD 87 (238)
Q Consensus 75 ll~~lLR~elgF~ 87 (238)
+|+++||+||||+
T Consensus 224 ll~~lLR~elGF~ 236 (340)
T 2oxn_A 224 WLKQVLREELGFK 236 (340)
T ss_dssp HHTCCCCCCTCCC
T ss_pred HHHHHhhcccCCC
Confidence 9999999999998
No 11
>4g6c_A Beta-hexosaminidase 1; ssgcid, niaid, structural genomics, Na institute of allergy and infectious diseases; 1.38A {Burkholderia cenocepacia} PDB: 4gnv_A*
Probab=99.77 E-value=2.3e-20 Score=167.32 Aligned_cols=78 Identities=18% Similarity=0.150 Sum_probs=66.9
Q ss_pred cchhcccccchhhhccccc-----ccccc----c---ChHHHHhhccHHHHHHHHhcCcceeEee---cccCCCcccccC
Q 039625 8 TSNIGLRSLVVASIILLMM-----LTIRK----V---TKQDLEDMYQPPFKSCVKESHVSSVICS---YNRVIGIPTCAD 72 (238)
Q Consensus 8 ~~~~G~q~~gv~~~~khf~-----~~ds~----i---~~~~L~e~~l~PF~~ai~~g~~~~VM~s---y~~vng~pa~~s 72 (238)
..++|+|+.||++|.|||| ..|+| + +.++|++.||+||+++ ++|. .+|||| ||.+||.|+|+|
T Consensus 161 A~v~Glq~~GV~a~~KHFpG~G~~~~dsh~~~~v~~~~~~el~~~~l~PF~~a-~ag~-~~VM~aHv~y~~id~~Pa~~S 238 (348)
T 4g6c_A 161 SLNHGLSLAGMANCGKHFPGHGFAEADSHVALPTDDRTLDAILEQDVAPYDWL-GLSL-AAVIPAHVIYTQVDKRPAGFS 238 (348)
T ss_dssp HHHHHHHHTTCCCCEEEETCSSSCCC----CCCEECCCHHHHHHTTSHHHHHH-GGGC-CEEEECSCEETTTCSSCGGGC
T ss_pred HHHHHHHhcCCceeeCCCCCCCCccCCCCCCCCcCCCCHHHHHHHHHHHHHHH-hcCC-CeEEecceeecCCCCccccCC
Confidence 3579999999999999997 34555 2 4566777799999999 8886 599999 999999999999
Q ss_pred HHHHHHHHHHhhhhh
Q 039625 73 PDLLKGVIKSQWGLD 87 (238)
Q Consensus 73 ~~ll~~lLR~elgF~ 87 (238)
+++|+++||+||||+
T Consensus 239 ~~ll~~lLR~elGF~ 253 (348)
T 4g6c_A 239 RVWLQDILRGKLGFT 253 (348)
T ss_dssp HHHHCCCCCCCSCCC
T ss_pred HHHHHHHHhhccCCC
Confidence 999999999999998
No 12
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=64.84 E-value=13 Score=29.59 Aligned_cols=56 Identities=21% Similarity=0.229 Sum_probs=40.6
Q ss_pred HHHHHHHHHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHHHHHHHh-----hCCCceEEEEecCcee
Q 039625 164 LLIEQAAKAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKLVMEVAN-----ATKGTMILVVMAAGNV 230 (238)
Q Consensus 164 ~~~~~a~~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~li~~l~~-----~~~~~vVvV~~~g~P~ 230 (238)
....+..+...+||.+|++.-. -+..+|+.-..+|+.+.. -.+||+.++..+|+++
T Consensus 62 ~~~~~~~~~i~~AD~iVi~tP~-----------Y~~s~p~~LK~~iD~~~~~~~~~l~gK~v~~v~tsgg~~ 122 (199)
T 4hs4_A 62 APVLTMAQQIATADAVVIVTPE-----------YNYSVPGVLKNAIDWLSRVSPQPLAGKPVALVTASPGMI 122 (199)
T ss_dssp HHHHHHHHHHHHSSEEEEEECC-----------BTTBCCHHHHHHHHHHTTSSSCTTTTCEEEEEEECSSSS
T ss_pred HHHHHHHHHHHhCCEEEEEcCc-----------cCCCcCHHHHHHHHHhcccCCcccCCCEEEEEEeCCCCc
Confidence 4567788888899999987631 257788877888888753 2478887777766654
No 13
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=61.10 E-value=6.6 Score=34.17 Aligned_cols=58 Identities=12% Similarity=0.212 Sum_probs=33.0
Q ss_pred HHhCCCCEEEEEeeCCCCccccCCCCCCCCCCH--HHHHHHHHHHhhCCCceEEEEecCceeec
Q 039625 171 KAAGTADVVVMVVGLDQSIEAEGLDKENLTLHG--YQEKLVMEVANATKGTMILVVMAAGNVDV 232 (238)
Q Consensus 171 ~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~--~q~~li~~l~~~~~~~vVvV~~~g~P~~l 232 (238)
+..+++|+||++.|.+. .+|.+|.+|---. --.++++++.+..++-+++ ++.++|+++
T Consensus 75 ~~~~daDvVvitAg~pr---kpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~v-ivvsNPvd~ 134 (333)
T 5mdh_A 75 IAFKDLDVAILVGSMPR---RDGMERKDLLKANVKIFKCQGAALDKYAKKSVKV-IVVGNPANT 134 (333)
T ss_dssp HHTTTCSEEEECCSCCC---CTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEE-EECSSSHHH
T ss_pred HHhCCCCEEEEeCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEE-EEcCCchHH
Confidence 44679999999887542 3555665432111 1235566676644432333 344799864
No 14
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=60.32 E-value=5.3 Score=34.89 Aligned_cols=55 Identities=15% Similarity=0.177 Sum_probs=33.0
Q ss_pred hCCCCEEEEEeeCCCCccccCCCCCCCCCCHH--HHHHHHHHHhhCCCceEEEEecCceeec
Q 039625 173 AGTADVVVMVVGLDQSIEAEGLDKENLTLHGY--QEKLVMEVANATKGTMILVVMAAGNVDV 232 (238)
Q Consensus 173 a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~--q~~li~~l~~~~~~~vVvV~~~g~P~~l 232 (238)
.++||+||++.|.+. .+|.+|.++-.-.. =.++++++.+.+++ .++ ++..+|+++
T Consensus 87 ~~daDiVIitaG~p~---kpG~tR~dll~~N~~I~k~i~~~I~k~~P~-a~i-lvvtNPvdi 143 (330)
T 3ldh_A 87 SAGSKLVVITAGARQ---QEGESRLNLVQRNVNIFKFIIPNIVKHSPD-CLK-ELHPELGTD 143 (330)
T ss_dssp CSSCSEEEECCSCCC---CSSCCTTGGGHHHHHHHHHHHHHHHHHCTT-CEE-EECSSSHHH
T ss_pred hCCCCEEEEeCCCCC---CCCCCHHHHHHhhHHHHHHHHHHHHhhCCC-ceE-EeCCCccHH
Confidence 579999999998653 45666654332211 12455667665443 543 445799865
No 15
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=60.03 E-value=12 Score=29.38 Aligned_cols=57 Identities=14% Similarity=0.092 Sum_probs=40.4
Q ss_pred HHHHHHHHHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHHHHHHHh---------------hCCCceEEEEecCc
Q 039625 164 LLIEQAAKAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKLVMEVAN---------------ATKGTMILVVMAAG 228 (238)
Q Consensus 164 ~~~~~a~~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~li~~l~~---------------~~~~~vVvV~~~g~ 228 (238)
..+.+..+...+||.+|++.=. -+..+|..=..+|+.+.. -.+|+++++..+|+
T Consensus 83 ~~~~~~~~~l~~aD~iv~~~P~-----------y~~~~pa~lK~~iD~~~~~g~~~~~~~~~~~~~l~gK~~~~i~t~g~ 151 (208)
T 2hpv_A 83 ARFNELTDQFLSADKVVIANPM-----------WNLNVPTRLKAWVDTINVAGKTFQYTAEGPKPLTSGKKALHIQSNGG 151 (208)
T ss_dssp HHHHHHHHHHHHCSEEEEEEEC-----------BTTBCCHHHHHHHHHHCCBTTTEEEETTEEEESCCSCEEEEEEEESS
T ss_pred HHHHHHHHHHHhCCEEEEEecc-----------ccCCCCHHHHHHHHHHhcCCcEeecCCCCCccCCCCCeEEEEEecCC
Confidence 3456677788899999987631 256778777788888752 13677887777788
Q ss_pred eee
Q 039625 229 NVD 231 (238)
Q Consensus 229 P~~ 231 (238)
++.
T Consensus 152 ~~~ 154 (208)
T 2hpv_A 152 FYE 154 (208)
T ss_dssp CCC
T ss_pred CCC
Confidence 763
No 16
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=59.27 E-value=15 Score=29.31 Aligned_cols=56 Identities=18% Similarity=0.119 Sum_probs=40.7
Q ss_pred HHHHHHHHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHHHHHHHh---------------hCCCceEEEEecCce
Q 039625 165 LIEQAAKAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKLVMEVAN---------------ATKGTMILVVMAAGN 229 (238)
Q Consensus 165 ~~~~a~~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~li~~l~~---------------~~~~~vVvV~~~g~P 229 (238)
...+..+...+||.+|++.-. -+..+|..=..+|+.+.. -.+|+++++..+|+|
T Consensus 82 ~~~~~~~~~~~aD~iv~~~P~-----------y~~~~p~~lK~~iD~~~~~~~~~~~~~~g~~g~l~gK~~~~i~t~g~~ 150 (211)
T 3p0r_A 82 VADKYLNQFLEADKVVFGFPL-----------WNLTIPAVLHTYIDYLNRAGKTFKYTPEGPVGLIGDKKIALLNARGGV 150 (211)
T ss_dssp HHHHHHHHHHHCSEEEEEEEC-----------BTTBCCHHHHHHHHHHCCBTTTEECCTTCCEESCTTCEEEEEEEESSC
T ss_pred HHHHHHHHHHhCCEEEEEcCh-----------hcccCCHHHHHHHHHHhccCceeccCCCCCccCCCCCEEEEEEeCCCC
Confidence 456777888999999987632 256778777788887742 136788888888999
Q ss_pred ee
Q 039625 230 VD 231 (238)
Q Consensus 230 ~~ 231 (238)
|.
T Consensus 151 ~~ 152 (211)
T 3p0r_A 151 YS 152 (211)
T ss_dssp CS
T ss_pred CC
Confidence 63
No 17
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=58.99 E-value=1.9 Score=37.10 Aligned_cols=56 Identities=13% Similarity=0.319 Sum_probs=32.5
Q ss_pred HhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHH--HHHHHHHHhhCCCceEEEEecCceeec
Q 039625 172 AAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQ--EKLVMEVANATKGTMILVVMAAGNVDV 232 (238)
Q Consensus 172 ~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q--~~li~~l~~~~~~~vVvV~~~g~P~~l 232 (238)
..++||+||++.|.+. ..|.+|.+|---... .++++++++.+++ .++ +...+|++.
T Consensus 66 ~~~~aDvVvitAG~pr---kpGmtR~dLl~~Na~I~~~i~~~i~~~~p~-aiv-lvvsNPvd~ 123 (294)
T 2x0j_A 66 LLKGSEIIVVTAGLAR---KPGMTRLDLAHKNAGIIKDIAKKIVENAPE-SKI-LVVTNPMDV 123 (294)
T ss_dssp GGTTCSEEEECCCCCC---CSSSCHHHHHHHHHHHHHHHHHHHHTTSTT-CEE-EECSSSHHH
T ss_pred HhCCCCEEEEecCCCC---CCCCchHHHHHHHHHHHHHHHHHHHhcCCc-eEE-EEecCcchh
Confidence 3679999999999653 445565433211111 2455667665554 443 345899864
No 18
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=58.75 E-value=16 Score=28.22 Aligned_cols=54 Identities=13% Similarity=0.155 Sum_probs=37.9
Q ss_pred HHHHHHHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHHHHHHHh---------------hCCCceEEEEecCcee
Q 039625 166 IEQAAKAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKLVMEVAN---------------ATKGTMILVVMAAGNV 230 (238)
Q Consensus 166 ~~~a~~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~li~~l~~---------------~~~~~vVvV~~~g~P~ 230 (238)
+.+..+...+||.+|++.-. -...+|..-..+|+.+.. -.+|+++++..+|+++
T Consensus 77 ~~~~~~~l~~aD~iv~~~P~-----------y~~~~p~~lK~~iD~~~~~~~~~~~~~~~~~~~l~~K~~~~i~t~g~~~ 145 (201)
T 1t5b_A 77 SDELIAELKAHDVIVIAAPM-----------YNFNIPTQLKNYFDLIARAGITFRYTEKGPEGLVTGKRAVVLSSRGGIH 145 (201)
T ss_dssp HHHHHHHHHHCSEEEEECCC-----------BTTBCCHHHHHHHHHHCCBTTTEEEETTEEEESSCSCEEEEEEECSSCC
T ss_pred HHHHHHHHHhCCEEEEEeCc-----------ccCcCCHHHHHHHHHheeCCCceecCCCCCccCCCCCeEEEEEecCCCC
Confidence 45566778899999877531 145677777788888752 2467888777778775
No 19
>3lcm_A SMU.1420, putative oxidoreductase; NADPH:quinone oxidoreductase, MDAB; HET: FAD NAP; 1.80A {Streptococcus mutans} PDB: 4f8y_A*
Probab=57.70 E-value=13 Score=29.41 Aligned_cols=55 Identities=7% Similarity=0.001 Sum_probs=40.9
Q ss_pred HHHHHHHHHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHHHHHHHh---------------hCCCceEEEEecCc
Q 039625 164 LLIEQAAKAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKLVMEVAN---------------ATKGTMILVVMAAG 228 (238)
Q Consensus 164 ~~~~~a~~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~li~~l~~---------------~~~~~vVvV~~~g~ 228 (238)
..+.+..+...+||.+|++.=. -+..+|..=..+|+.+.. -.+|+++++..+|+
T Consensus 62 ~~~~~~~~~l~~AD~iV~~~P~-----------y~~~~pa~LK~~iD~v~~~g~~~~~~~~~~~~~l~gK~~~~i~t~g~ 130 (196)
T 3lcm_A 62 AEMEKYRDLVTWADHLIFIFPI-----------WWSGMPAILKGFIDRVFVADFAYSYKKVGLEGHLQGKSAWIITTHNT 130 (196)
T ss_dssp GGGHHHHHHHHHCSEEEEEEEC-----------BTTBCCHHHHHHHHHHSCBTTTEEECSSSEEESCTTCEEEEEEECSS
T ss_pred HHHHHHHHHHHhCCEEEEECch-----------hhccccHHHHHHHHHHccCCcceecCCCCcccCCCCCEEEEEEcCCC
Confidence 4566778888899999987631 257778877788888731 23688988888899
Q ss_pred e
Q 039625 229 N 229 (238)
Q Consensus 229 P 229 (238)
|
T Consensus 131 ~ 131 (196)
T 3lcm_A 131 P 131 (196)
T ss_dssp C
T ss_pred c
Confidence 8
No 20
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=57.24 E-value=5.9 Score=34.46 Aligned_cols=56 Identities=25% Similarity=0.348 Sum_probs=27.9
Q ss_pred HhCCCCEEEEEeeCCCCccccCCCCCCCCCCH--HHHHHHHHHHhhCCCceEEEEecCceeec
Q 039625 172 AAGTADVVVMVVGLDQSIEAEGLDKENLTLHG--YQEKLVMEVANATKGTMILVVMAAGNVDV 232 (238)
Q Consensus 172 ~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~--~q~~li~~l~~~~~~~vVvV~~~g~P~~l 232 (238)
..++||+||++.|.+ ..+|.+|.+|---. -=.++.+++.+.+++ .++ ++.++|+++
T Consensus 73 a~~~aDiVvi~ag~~---~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~-a~i-lvvtNPvdi 130 (326)
T 3vku_A 73 DAKDADLVVITAGAP---QKPGETRLDLVNKNLKILKSIVDPIVDSGFN-GIF-LVAANPVDI 130 (326)
T ss_dssp GGTTCSEEEECCCCC-------------------CHHHHHHHHHTTTCC-SEE-EECSSSHHH
T ss_pred HhcCCCEEEECCCCC---CCCCchHHHHHHHHHHHHHHHHHHHHhcCCc-eEE-EEccCchHH
Confidence 367999999998854 23455665542111 124566777765543 543 444799865
No 21
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=56.15 E-value=2.4 Score=37.34 Aligned_cols=56 Identities=13% Similarity=0.214 Sum_probs=31.5
Q ss_pred HHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHH----HHHHHHHhhCCCceEEEEecCceeec
Q 039625 171 KAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQE----KLVMEVANATKGTMILVVMAAGNVDV 232 (238)
Q Consensus 171 ~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~----~li~~l~~~~~~~vVvV~~~g~P~~l 232 (238)
+..+++|+||++.|.+. .+|.+|.+|- .... ++.+++.+...+.++ |+..++|++.
T Consensus 96 ~a~~~advVvi~aG~pr---kpGmtR~DLl--~~Na~I~~~~~~~i~~~a~~~~~-vlvvsNPvd~ 155 (345)
T 4h7p_A 96 VAFDGVAIAIMCGAFPR---KAGMERKDLL--EMNARIFKEQGEAIAAVAASDCR-VVVVGNPANT 155 (345)
T ss_dssp HHTTTCSEEEECCCCCC---CTTCCHHHHH--HHHHHHHHHHHHHHHHHSCTTCE-EEECSSSHHH
T ss_pred HHhCCCCEEEECCCCCC---CCCCCHHHHH--HHhHHHHHHHHHHHHhhccCceE-EEEeCCCcch
Confidence 34789999999988542 4555654331 1122 334455543333344 4445899764
No 22
>3u7i_A FMN-dependent NADH-azoreductase 1; structural genomics, the center for structural genomics of I diseases, csgid, oxidoreductase; HET: MSE; 1.75A {Bacillus anthracis}
Probab=55.52 E-value=20 Score=29.04 Aligned_cols=56 Identities=13% Similarity=0.199 Sum_probs=40.5
Q ss_pred HHHHHHHHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHHHHHHHh---------------h-CCCceEEEEecCc
Q 039625 165 LIEQAAKAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKLVMEVAN---------------A-TKGTMILVVMAAG 228 (238)
Q Consensus 165 ~~~~a~~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~li~~l~~---------------~-~~~~vVvV~~~g~ 228 (238)
...+..+....||.+|++.-. -+..+|..-..+|+.+.. . .+|+++++..+|+
T Consensus 84 ~~~~l~~~~~~aD~iv~~~P~-----------y~~~~p~~lK~~iD~~~~~g~~f~~~~~g~~~~l~~gK~~~~i~t~gg 152 (223)
T 3u7i_A 84 RMSEILQQFKSANTYVIVLPL-----------HNFNIPSKLKDYMDNIMIARETFKYTETGSVGLLKDGRRMLVIQASGG 152 (223)
T ss_dssp HHHHHHHHHHHCSEEEEEEEC-----------BTTBCCHHHHHHHHHHCCBTTTEEECSSCEEESCCSSCEEEEEEECSS
T ss_pred HHHHHHHHHHhCCEEEEEcCh-----------hhccCCHHHHHHHHHHhhcCCceecCCCCCcccccCCCEEEEEEeCCC
Confidence 456778888999999987642 256778777778887643 1 3688888888888
Q ss_pred eee
Q 039625 229 NVD 231 (238)
Q Consensus 229 P~~ 231 (238)
+|.
T Consensus 153 ~~~ 155 (223)
T 3u7i_A 153 IYT 155 (223)
T ss_dssp CCS
T ss_pred CCC
Confidence 763
No 23
>3ha2_A NADPH-quinone reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics, consortium, NESG; HET: MSE; 1.80A {Pediococcus pentosaceus atcc 25745}
Probab=51.75 E-value=23 Score=27.73 Aligned_cols=54 Identities=15% Similarity=0.092 Sum_probs=38.7
Q ss_pred HHHHHHHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHHHHHHHh----------hCCCceEEEEecCcee
Q 039625 166 IEQAAKAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKLVMEVAN----------ATKGTMILVVMAAGNV 230 (238)
Q Consensus 166 ~~~a~~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~li~~l~~----------~~~~~vVvV~~~g~P~ 230 (238)
+++..+....||.+|+..=. -.+..|..=..+++.+.. -.+|++++++.+|+|.
T Consensus 42 ~~~~~~~l~~aD~iV~~~P~-----------y~~~~pa~lK~~iDrv~~~g~~~~~~~~l~gK~~~~~~t~g~~~ 105 (177)
T 3ha2_A 42 VEQEQSLLLQNDRIILEFPL-----------YWYSAPALLKQWMDTVMTTKFATGHQYALEGKELGIVVSTGDNG 105 (177)
T ss_dssp HHHHHHHHHTCSEEEEEEEC-----------BTTBCCHHHHHHHHHHSCHHHHSTTTCTTTTCEEEEEEEESSCG
T ss_pred HHHHHHHHHhCCEEEEECCh-----------hhccCCHHHHHHHHHHhhcccccCCCcCCCCCEEEEEEeCCCCh
Confidence 56677888899999987531 246677766778877531 2468888888889884
No 24
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=51.69 E-value=3.1 Score=35.62 Aligned_cols=56 Identities=14% Similarity=0.325 Sum_probs=31.0
Q ss_pred HhCCCCEEEEEeeCCCCccccCCCCCCCCCCHH--HHHHHHHHHhhCCCceEEEEecCceeec
Q 039625 172 AAGTADVVVMVVGLDQSIEAEGLDKENLTLHGY--QEKLVMEVANATKGTMILVVMAAGNVDV 232 (238)
Q Consensus 172 ~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~--q~~li~~l~~~~~~~vVvV~~~g~P~~l 232 (238)
..++||+||++.|.+. .+|.+|.++-.-.. =.++++++.+.+++ .++++ ..+|+++
T Consensus 66 a~~~aDiVViaag~~~---kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~-a~iiv-vsNPvd~ 123 (294)
T 1oju_A 66 LLKGSEIIVVTAGLAR---KPGMTRLDLAHKNAGIIKDIAKKIVENAPE-SKILV-VTNPMDV 123 (294)
T ss_dssp GGTTCSEEEECCCCCC---CSSCCHHHHHHHHHHHHHHHHHHHHTTSTT-CEEEE-CSSSHHH
T ss_pred HhCCCCEEEECCCCCC---CCCCcHHHHHHHHHHHHHHHHHHHHhhCCC-eEEEE-eCCcchH
Confidence 3579999999998652 34545543211110 12445566654443 54444 4699865
No 25
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=51.06 E-value=4.3 Score=35.08 Aligned_cols=57 Identities=25% Similarity=0.347 Sum_probs=31.2
Q ss_pred HHhCCCCEEEEEeeCCCCccccCCCCCCCCCCH--HHHHHHHHHHhhCCCceEEEEecCceeec
Q 039625 171 KAAGTADVVVMVVGLDQSIEAEGLDKENLTLHG--YQEKLVMEVANATKGTMILVVMAAGNVDV 232 (238)
Q Consensus 171 ~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~--~q~~li~~l~~~~~~~vVvV~~~g~P~~l 232 (238)
+..+++|+||++.|.+. .+|.+|.+|---. --.++.+++.+.+++ .+++ +.++|+++
T Consensus 65 ~~~~~aDivii~ag~~r---kpG~~R~dll~~N~~I~~~i~~~i~~~~p~-a~vl-vvtNPvd~ 123 (312)
T 3hhp_A 65 PALEGADVVLISAGVAR---KPGMDRSDLFNVNAGIVKNLVQQVAKTCPK-ACIG-IITNPVNT 123 (312)
T ss_dssp HHHTTCSEEEECCSCSC---CTTCCHHHHHHHHHHHHHHHHHHHHHHCTT-SEEE-ECSSCHHH
T ss_pred HHhCCCCEEEEeCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHCCC-cEEE-EecCcchh
Confidence 34679999999998542 3454553221000 012445556654544 4434 44799865
No 26
>3fvw_A Putative NAD(P)H-dependent FMN reductase; Q8DWD8_strmu, SMR99, NESG, structural genomics, PSI-2, protein structure initiative; 2.30A {Streptococcus mutans}
Probab=50.95 E-value=31 Score=26.93 Aligned_cols=55 Identities=15% Similarity=0.158 Sum_probs=38.6
Q ss_pred hHHHHHHHHHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHHHHHHHh------------hCCCceEEEEecCc
Q 039625 163 RLLIEQAAKAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKLVMEVAN------------ATKGTMILVVMAAG 228 (238)
Q Consensus 163 ~~~~~~a~~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~li~~l~~------------~~~~~vVvV~~~g~ 228 (238)
...+.+..+...+||.+|++.- - -+...|+.-..+|+.+.. -.+||++++..+|+
T Consensus 55 ~~~~~~~~~~i~~AD~iV~~sP--~---------y~~~~p~~lK~~iD~~~~~~~~~~~~g~~~l~gK~~~i~~t~gg 121 (192)
T 3fvw_A 55 HPEVAHAREEVQEADAIWIFSP--V---------YNYAIPGPVKNLLDWLSRSLDLSDPTGPSVLQDKIVTVSSVANG 121 (192)
T ss_dssp CHHHHHHHHHHHHCSEEEEECC--C---------BTTBCCHHHHHHHHHHTSCSCSSCTTSCCTTTTCEEEEEEESCC
T ss_pred cHHHHHHHHHHHhCCEEEEECc--c---------cccCCCHHHHHHHHHhhccccccCCCCCccCCCCEEEEEEeCCC
Confidence 3556778888889999987752 1 256778877788888762 23677876666665
No 27
>3svl_A Protein YIEF; E. coli CHRR enzyme, chromate bioremediation, tetramer role, mutant enzymes, oxidoreductase; HET: FMN; 2.20A {Escherichia coli}
Probab=49.31 E-value=38 Score=26.58 Aligned_cols=56 Identities=18% Similarity=0.157 Sum_probs=38.8
Q ss_pred hHHHHHHHHHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHHHHHHHh-----hCCCceEEEEecCce
Q 039625 163 RLLIEQAAKAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKLVMEVAN-----ATKGTMILVVMAAGN 229 (238)
Q Consensus 163 ~~~~~~a~~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~li~~l~~-----~~~~~vVvV~~~g~P 229 (238)
.....+..+...+||.+|++.-. .+..+|+.=..+|+.+.. -.+||+.++..++++
T Consensus 60 ~~~~~~l~~~i~~AD~iv~~sP~-----------y~~~~~~~lK~~iD~~~~~~~~~~~gK~~~~~~~s~g~ 120 (193)
T 3svl_A 60 PATVEALAEQIRQADGVVIVTPE-----------YNYSVPGGLKNAIDWLSRLPDQPLAGKPVLIQTSSMGV 120 (193)
T ss_dssp CHHHHHHHHHHHHSSEEEEEECC-----------BTTBCCHHHHHHHHHHHTSTTCTTTTCEEEEEEECSST
T ss_pred CHHHHHHHHHHHHCCEEEEEecc-----------cCCCCCHHHHHHHHHHhhcCccccCCCeEEEEEeCCCC
Confidence 34567788888999999987631 256778777788888763 246877766655554
No 28
>1rli_A Trp repressor binding protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bacillus subtilis} SCOP: c.23.5.6
Probab=49.18 E-value=36 Score=25.70 Aligned_cols=54 Identities=4% Similarity=0.083 Sum_probs=35.6
Q ss_pred HHHHHHHHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHHHHHHHh-------------hCCCceEEEEecCce
Q 039625 165 LIEQAAKAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKLVMEVAN-------------ATKGTMILVVMAAGN 229 (238)
Q Consensus 165 ~~~~a~~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~li~~l~~-------------~~~~~vVvV~~~g~P 229 (238)
.+.+..+...+||.+|++.-. -...+|..=..+|+.+.. -.+|+++++..+|+|
T Consensus 61 ~~~~~~~~l~~aD~ii~~~P~-----------y~~~~p~~lK~~iD~~~~~~~~~~~~~~~~~l~~K~~~~i~t~g~~ 127 (184)
T 1rli_A 61 DYDSIIERILQCHILIFATPI-----------YWFGMSGTLKLFIDRWSQTLRDPRFPDFKQQMSVKQAYVIAVGGDN 127 (184)
T ss_dssp CHHHHHHHHHTCSEEEEEEEC-----------BTTBCCHHHHHHHHTHHHHTTCTTSTTHHHHHHTSEEEEEEEESSC
T ss_pred CHHHHHHHHHhCCEEEEEeCc-----------cccCCcHHHHHHHHHhHHhccCccccccccccCCCeEEEEEeCCCC
Confidence 355667778899999987632 145567665677776531 236788777776764
No 29
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=48.90 E-value=3.8 Score=35.43 Aligned_cols=56 Identities=21% Similarity=0.466 Sum_probs=31.8
Q ss_pred HhCCCCEEEEEeeCCCCccccCCCCCCCCCCH--HHHHHHHHHHhhCCCceEEEEecCceeec
Q 039625 172 AAGTADVVVMVVGLDQSIEAEGLDKENLTLHG--YQEKLVMEVANATKGTMILVVMAAGNVDV 232 (238)
Q Consensus 172 ~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~--~q~~li~~l~~~~~~~vVvV~~~g~P~~l 232 (238)
..++||+||++.|.+. .+|.+|.+|---. --.++++++.+.+++ .+ +++.++|.++
T Consensus 75 a~~~aDvVIiaag~p~---kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~-a~-vlvvsNPvd~ 132 (315)
T 3tl2_A 75 DTADSDVVVITAGIAR---KPGMSRDDLVATNSKIMKSITRDIAKHSPN-AI-IVVLTNPVDA 132 (315)
T ss_dssp GGTTCSEEEECCSCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHHCTT-CE-EEECCSSHHH
T ss_pred HhCCCCEEEEeCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHhCCC-eE-EEECCChHHH
Confidence 4679999999998653 3455553321100 123455666664443 44 3445799864
No 30
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=48.62 E-value=3.7 Score=35.73 Aligned_cols=56 Identities=25% Similarity=0.321 Sum_probs=31.4
Q ss_pred HhCCCCEEEEEeeCCCCccccCCCCCCCCCCH--HHHHHHHHHHhhCCCceEEEEecCceeec
Q 039625 172 AAGTADVVVMVVGLDQSIEAEGLDKENLTLHG--YQEKLVMEVANATKGTMILVVMAAGNVDV 232 (238)
Q Consensus 172 ~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~--~q~~li~~l~~~~~~~vVvV~~~g~P~~l 232 (238)
..++||+||++.|.+. .+|.+|.+|-.-. --.++++++.+.+++ .+ +++.++|+++
T Consensus 70 a~~~aDvVvi~ag~p~---kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~-a~-vlvvtNPvd~ 127 (326)
T 3pqe_A 70 DCKDADIVCICAGANQ---KPGETRLELVEKNLKIFKGIVSEVMASGFD-GI-FLVATNPVDI 127 (326)
T ss_dssp GGTTCSEEEECCSCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHTTCC-SE-EEECSSSHHH
T ss_pred HhCCCCEEEEecccCC---CCCccHHHHHHHHHHHHHHHHHHHHHhcCC-eE-EEEcCChHHH
Confidence 3679999999998542 3444443221100 113455666664443 44 4445799865
No 31
>3dnf_A ISPH, LYTB, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; trilobal strucure, open alpha/beta, iron, iron-sulfur, isopr biosynthesis; 1.65A {Aquifex aeolicus}
Probab=48.59 E-value=1.2e+02 Score=25.96 Aligned_cols=102 Identities=10% Similarity=0.102 Sum_probs=56.5
Q ss_pred CHHHHHHHHHHH--HhCceeccCC-CCCCCCCCCCCcEEEEccCCCchhh------------------------hHHH-H
Q 039625 116 TDDHKSLALDAA--KQGIDSLDNK-GALPLSSNNTKNLAVIGSNANATNR------------------------RLLI-E 167 (238)
Q Consensus 116 ~~~~~~la~~~a--~~sivLLkN~-~~LPL~~~~~~~i~viG~~a~~~~~------------------------~~~~-~ 167 (238)
=||-..+.-++. ...+.+++|. .+--|... ++++++---.-+... ...- +
T Consensus 124 HpEV~G~~g~~~~~~~~~~vV~~~ed~~~l~~~--~kv~~vsQTT~s~~~~~~iv~~L~~r~p~~~~~~tIC~AT~~RQ~ 201 (297)
T 3dnf_A 124 HPEVIGTLGYLRACNGKGIVVETLEDIGEALKH--ERVGIVAQTTQNEEFFKEVVGEIALWVKEVKVINTICNATSLRQE 201 (297)
T ss_dssp CHHHHHHHHHHHHTTCCEEEESSGGGGGGGGGC--SEEEEEECTTCCHHHHHHHHHHHHHHSSEEEEECCCCSHHHHHHH
T ss_pred CceEEeeccccccCCCcEEEEcCHHHHHhcCCC--CcEEEEEecCCcHHHHHHHHHHHHHhCCCCCCCCCccHHHHHHHH
Confidence 366666666552 3457778875 43223222 678887653322211 1122 3
Q ss_pred HHHHHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHHHHHHHhhCCCceEEEEecCceeecCCCc
Q 039625 168 QAAKAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKLVMEVANATKGTMILVVMAAGNVDVSFCK 236 (238)
Q Consensus 168 ~a~~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~li~~l~~~~~~~vVvV~~~g~P~~l~~~~ 236 (238)
++.+.|+++|++||+.|.++ .+..+|.+ +++..+.|+. .+-+..=++..|++
T Consensus 202 av~~la~~~D~miVVGg~nS---------------SNT~rL~e-ia~~~~~~ty-~Ie~~~el~~~wl~ 253 (297)
T 3dnf_A 202 SVKKLAPEVDVMIIIGGKNS---------------GNTRRLYY-ISKELNPNTY-HIETAEELQPEWFR 253 (297)
T ss_dssp HHHHHGGGSSEEEEESCTTC---------------HHHHHHHH-HHHHHCSSEE-EESSGGGCCGGGGT
T ss_pred HHHHHHhhCCEEEEECCCCC---------------chhHHHHH-HHHhcCCCEE-EeCChHHCCHHHhC
Confidence 45678899999999877443 34556655 4433556664 33333445556765
No 32
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=48.57 E-value=5.8 Score=34.60 Aligned_cols=56 Identities=20% Similarity=0.326 Sum_probs=32.3
Q ss_pred HhCCCCEEEEEeeCCCCccccCCCCCCCCCCHH--HHHHHHHHHhhCCCceEEEEecCceeec
Q 039625 172 AAGTADVVVMVVGLDQSIEAEGLDKENLTLHGY--QEKLVMEVANATKGTMILVVMAAGNVDV 232 (238)
Q Consensus 172 ~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~--q~~li~~l~~~~~~~vVvV~~~g~P~~l 232 (238)
..++||+||++.|.+. .+|.+|.+|---.. =.++.+++.+.+++ .++ ++.++|+++
T Consensus 84 ~~~~aDiVvi~aG~~~---kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~-a~v-lvvtNPvdi 141 (331)
T 4aj2_A 84 VTANSKLVIITAGARQ---QEGESRLNLVQRNVNIFKFIIPNVVKYSPQ-CKL-LIVSNPVDI 141 (331)
T ss_dssp GGTTEEEEEECCSCCC---CTTCCGGGGHHHHHHHHHHHHHHHHHHCTT-CEE-EECSSSHHH
T ss_pred HhCCCCEEEEccCCCC---CCCccHHHHHHHHHHHHHHHHHHHHHHCCC-eEE-EEecChHHH
Confidence 3679999999998653 35656643321111 12455566665443 443 445799864
No 33
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=47.85 E-value=3.9 Score=35.39 Aligned_cols=56 Identities=16% Similarity=0.386 Sum_probs=28.1
Q ss_pred HhCCCCEEEEEeeCCCCccccCCCCCCCCCCH--HHHHHHHHHHhhCCCceEEEEecCceeec
Q 039625 172 AAGTADVVVMVVGLDQSIEAEGLDKENLTLHG--YQEKLVMEVANATKGTMILVVMAAGNVDV 232 (238)
Q Consensus 172 ~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~--~q~~li~~l~~~~~~~vVvV~~~g~P~~l 232 (238)
..++||+||++.|.+. .+|.+|.+|---. --.++.+++.+.+++ .+ +++.++|+++
T Consensus 66 a~~~aDvVii~ag~~~---kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~-a~-vivvtNPvd~ 123 (314)
T 3nep_X 66 PTEDSDVCIITAGLPR---SPGMSRDDLLAKNTEIVGGVTEQFVEGSPD-ST-IIVVANPLDV 123 (314)
T ss_dssp GGTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHHHTTCTT-CE-EEECCSSHHH
T ss_pred HhCCCCEEEECCCCCC---CCCCCHHHHHHhhHHHHHHHHHHHHHhCCC-cE-EEecCCchhH
Confidence 4679999999998542 3444554321111 112445566654443 54 4445799864
No 34
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=47.37 E-value=5.6 Score=35.38 Aligned_cols=57 Identities=5% Similarity=0.119 Sum_probs=30.6
Q ss_pred HHHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHH----HHHHHHHhhCCCceEEEEecCceeec
Q 039625 170 AKAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQE----KLVMEVANATKGTMILVVMAAGNVDV 232 (238)
Q Consensus 170 ~~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~----~li~~l~~~~~~~vVvV~~~g~P~~l 232 (238)
.+..+++|+||++.|.+ ..+|.+|.+|- ..-. ++++++.+..+...++ ++.++|+++
T Consensus 103 y~~~~daDvVVitag~p---rkpG~tR~DLl--~~N~~I~k~i~~~i~~~a~p~~iv-lVvsNPvD~ 163 (375)
T 7mdh_A 103 YEVFEDVDWALLIGAKP---RGPGMERAALL--DINGQIFADQGKALNAVASKNVKV-LVVGNPCNT 163 (375)
T ss_dssp HHHTTTCSEEEECCCCC---CCTTCCHHHHH--HHHHHHHHHHHHHHHHHSCTTCEE-EECSSSHHH
T ss_pred HHHhCCCCEEEEcCCCC---CCCCCCHHHHH--HHHHHHHHHHHHHHHHhcCCCeEE-EEecCchhH
Confidence 34577999999988754 23455553221 1111 2334455421223544 445799864
No 35
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=45.64 E-value=24 Score=28.02 Aligned_cols=54 Identities=15% Similarity=0.087 Sum_probs=38.7
Q ss_pred HHHHHHHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHHHHHHHh-----------hCCCceEEEEecCcee
Q 039625 166 IEQAAKAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKLVMEVAN-----------ATKGTMILVVMAAGNV 230 (238)
Q Consensus 166 ~~~a~~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~li~~l~~-----------~~~~~vVvV~~~g~P~ 230 (238)
+.+..+....||.+|+..=. -....|..=..+|+.+.. -.+|+++++..+|+|.
T Consensus 49 v~~~~~~l~~AD~iv~~~P~-----------y~~~~pa~lK~~iDrv~~~g~~y~~~g~~l~gK~~~~~~t~G~~~ 113 (192)
T 3f2v_A 49 VAAEQKLIETHDSLVWQFPI-----------YWFNCPPLLKQWLDEVLTYGWAYGSKGKALKGRKIALAVSLGAPA 113 (192)
T ss_dssp HHHHHHHHHTSSSEEEEEEC-----------BTTBCCHHHHHHHHHHSCBTTTBSSSCCSSTTCEEEEEEEESSCG
T ss_pred HHHHHHHHHhCCEEEEEcCh-----------hhcCCCHHHHHHHHHHhhcCccccCCCCCCCCCEEEEEEeCCCCh
Confidence 56677788899999987531 246677767778888631 2368888888889883
No 36
>1d4a_A DT-diaphorase, quinone reductase; flavoprotein, rossman fold, oxidoreductase; HET: FAD; 1.70A {Homo sapiens} SCOP: c.23.5.3 PDB: 1dxo_A* 1gg5_A* 1kbo_A* 1kbq_A* 2f1o_A* 3jsx_A* 1h69_A* 1h66_A* 1qbg_A* 1dxq_A* 1qrd_A*
Probab=45.14 E-value=36 Score=28.28 Aligned_cols=55 Identities=16% Similarity=0.135 Sum_probs=39.2
Q ss_pred HHHHHHHHHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHHHHHHHh---------------hCCCceEEEEecCc
Q 039625 164 LLIEQAAKAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKLVMEVAN---------------ATKGTMILVVMAAG 228 (238)
Q Consensus 164 ~~~~~a~~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~li~~l~~---------------~~~~~vVvV~~~g~ 228 (238)
..+.+..+....||.+|+..-. -+..+|..=..+|+.+.. -.+|++++++.+|+
T Consensus 82 dd~~~~~~~l~~AD~IV~~~P~-----------y~~s~Pa~LK~~iDrv~~~g~~f~~~~~~~~g~l~gK~~~~i~t~Gg 150 (273)
T 1d4a_A 82 PDIVAEQKKLEAADLVIFQFPL-----------QWFGVPAILKGWFERVFIGEFAYTYAAMYDKGPFRSKKAVLSITTGG 150 (273)
T ss_dssp HHHHHHHHHHHHCSEEEEEEEC-----------BTTBCCHHHHHHHHHHSCBTTTBCTTSCGGGSTTTTCEEEEEEECSS
T ss_pred HHHHHHHHHHHhCCEEEEECch-----------hhccCCHHHHHHHHHHHhcCcccccCCCCCccccCCCEEEEEEeCCC
Confidence 3456667778899999987632 256677766778887632 13688888888888
Q ss_pred e
Q 039625 229 N 229 (238)
Q Consensus 229 P 229 (238)
|
T Consensus 151 ~ 151 (273)
T 1d4a_A 151 S 151 (273)
T ss_dssp C
T ss_pred C
Confidence 8
No 37
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=45.10 E-value=22 Score=27.54 Aligned_cols=55 Identities=13% Similarity=0.153 Sum_probs=36.8
Q ss_pred HHHHHHHHHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHHHHHHHh-----hCCCceEEEEecCce
Q 039625 164 LLIEQAAKAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKLVMEVAN-----ATKGTMILVVMAAGN 229 (238)
Q Consensus 164 ~~~~~a~~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~li~~l~~-----~~~~~vVvV~~~g~P 229 (238)
..+.+..+...+||.+|++.-. + +..+|+.=..+|+.+.. -.+||++++..+|++
T Consensus 61 ~~~~~~~~~l~~aD~ii~~sP~---y--------~~~~p~~lK~~iD~~~~~~~~~l~gK~~~~~~t~gg~ 120 (193)
T 1rtt_A 61 PAVERFREQIRAADALLFATPE---Y--------NYSMAGVLKNAIDWASRPPEQPFSGKPAAILGASAGR 120 (193)
T ss_dssp HHHHHHHHHHHHCSEEEEECCE---E--------TTEECHHHHHHHHHHTCSSSCTTTTCEEEEEEECSST
T ss_pred HHHHHHHHHHHhCCEEEEEccc---c--------ccCcCHHHHHHHHHhccccCcccCCCeEEEEEeCCCC
Confidence 4566777788899999877521 1 34567766778888753 246777777666554
No 38
>1s4d_A Uroporphyrin-III C-methyltransferase; tetrapyrrole biosynthesis, cobalamin, SAM, SAH, uroporphyrin methyltransferase; HET: SAH; 2.70A {Pseudomonas denitrificans} SCOP: c.90.1.1
Probab=45.10 E-value=52 Score=27.44 Aligned_cols=32 Identities=31% Similarity=0.409 Sum_probs=22.7
Q ss_pred CcEEEEccCCCchhhhHHHHHHHHHhCCCCEEEE
Q 039625 148 KNLAVIGSNANATNRRLLIEQAAKAAGTADVVVM 181 (238)
Q Consensus 148 ~~i~viG~~a~~~~~~~~~~~a~~~a~~aD~vIv 181 (238)
.+|.++|-...++. ...-+|++.+++||+|+.
T Consensus 15 g~l~lVG~GpGd~~--lLTl~A~~~L~~ADvV~~ 46 (280)
T 1s4d_A 15 GSVWLVGAGPGDPG--LLTLHAANALRQADVIVH 46 (280)
T ss_dssp SCEEEEECBSSCTT--SSBHHHHHHHHHCSEEEE
T ss_pred cEEEEEecCCCCHH--HHHHHHHHHHHhCCEEEE
Confidence 58999987654432 223578888999999886
No 39
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=45.04 E-value=6.3 Score=34.18 Aligned_cols=56 Identities=18% Similarity=0.307 Sum_probs=28.8
Q ss_pred HhCCCCEEEEEeeCCCCccccCCCCCCCCCCH--HHHHHHHHHHhhCCCceEEEEecCceeec
Q 039625 172 AAGTADVVVMVVGLDQSIEAEGLDKENLTLHG--YQEKLVMEVANATKGTMILVVMAAGNVDV 232 (238)
Q Consensus 172 ~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~--~q~~li~~l~~~~~~~vVvV~~~g~P~~l 232 (238)
..++||+||++.|.+. .+|..|.++--.. --.++++++.+.+++ .+++ +..+|+++
T Consensus 72 a~~~aDiVIiaag~p~---k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~-a~ii-vvtNPvd~ 129 (324)
T 3gvi_A 72 AIEGADVVIVTAGVPR---KPGMSRDDLLGINLKVMEQVGAGIKKYAPE-AFVI-CITNPLDA 129 (324)
T ss_dssp GGTTCSEEEECCSCCC---C-----CHHHHHHHHHHHHHHHHHHHHCTT-CEEE-ECCSSHHH
T ss_pred HHCCCCEEEEccCcCC---CCCCCHHHHHHhhHHHHHHHHHHHHHHCCC-eEEE-ecCCCcHH
Confidence 4679999999998653 3344554321100 112445566654443 4434 45799865
No 40
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=43.77 E-value=3.5 Score=36.15 Aligned_cols=58 Identities=19% Similarity=0.244 Sum_probs=28.2
Q ss_pred HHhCCCCEEEEEeeCCCCccccCCCCCCCCCCH--HHHHHHHHHHhhCCCceEEEEecCceeec
Q 039625 171 KAAGTADVVVMVVGLDQSIEAEGLDKENLTLHG--YQEKLVMEVANATKGTMILVVMAAGNVDV 232 (238)
Q Consensus 171 ~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~--~q~~li~~l~~~~~~~vVvV~~~g~P~~l 232 (238)
+..++||+||++.|.+. .+|.+|.+|---. -=.++++++.+.+++ .+.+++.++|+++
T Consensus 72 ~al~dADvVvitaG~p~---kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~-a~~vlvvsNPvd~ 131 (343)
T 3fi9_A 72 EALTDAKYIVSSGGAPR---KEGMTREDLLKGNAEIAAQLGKDIKSYCPD-CKHVIIIFNPADI 131 (343)
T ss_dssp HHHTTEEEEEECCC----------CHHHHHHHHHHHHHHHHHHHHHHCTT-CCEEEECSSSHHH
T ss_pred HHhCCCCEEEEccCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHhccC-cEEEEEecCchHH
Confidence 34679999999998643 3444443221100 012445566664544 4323344799864
No 41
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=42.86 E-value=35 Score=26.81 Aligned_cols=53 Identities=11% Similarity=0.171 Sum_probs=37.8
Q ss_pred HHHHHHHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHHHHHHHh-------------------hCCCceEEEEec
Q 039625 166 IEQAAKAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKLVMEVAN-------------------ATKGTMILVVMA 226 (238)
Q Consensus 166 ~~~a~~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~li~~l~~-------------------~~~~~vVvV~~~ 226 (238)
..+..+...+||.+|++.=. -+..+|..=..+|+.+.. -.+|+++++..+
T Consensus 78 ~~~~~~~l~~AD~iV~~~P~-----------y~~~~pa~lK~~iD~~~~~g~~f~~~~~~g~~~~~~~l~gK~~~~i~t~ 146 (212)
T 3r6w_A 78 SDQLVGELFDSDLLVISTPM-----------YNFSVPSGLKAWIDQIVRLGVTFDFVLDNGVAQYRPLLRGKRALIVTSR 146 (212)
T ss_dssp HHHHHHHHHHCSEEEEEEEC-----------BTTBCCHHHHHHHHHHCCBTTTEEEEECC-CEEEEECCCSCEEEEEEEC
T ss_pred HHHHHHHHHhCCEEEEEcCc-----------ccccCCHHHHHHHHHHhhCCceeecccCCCCccccccCCCCEEEEEEec
Confidence 56677888899999987631 256778877788888731 136788888877
Q ss_pred Cce
Q 039625 227 AGN 229 (238)
Q Consensus 227 g~P 229 (238)
|+|
T Consensus 147 g~~ 149 (212)
T 3r6w_A 147 GGH 149 (212)
T ss_dssp SSS
T ss_pred CCC
Confidence 854
No 42
>3h0u_A Putative enoyl-COA hydratase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.50A {Streptomyces avermitilis}
Probab=42.27 E-value=55 Score=27.53 Aligned_cols=64 Identities=9% Similarity=-0.005 Sum_probs=34.0
Q ss_pred HHHHHHHHHhCC-CCE-EEEEeeCCCCccccCCCCCCC------------CCCHHHHHHHHHHHhhCCCceEEEEecCce
Q 039625 164 LLIEQAAKAAGT-ADV-VVMVVGLDQSIEAEGLDKENL------------TLHGYQEKLVMEVANATKGTMILVVMAAGN 229 (238)
Q Consensus 164 ~~~~~a~~~a~~-aD~-vIv~~g~~~~~~~eg~Dr~~l------------~l~~~q~~li~~l~~~~~~~vVvV~~~g~P 229 (238)
..+.+++..+.. .++ +||..|..+.+..-|.|...+ .....-.+++..+.. ++||||..++ |..
T Consensus 37 ~~L~~al~~~~~d~~vr~vVltg~G~~ff~~G~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~kPvIAaV~-G~a 114 (289)
T 3h0u_A 37 RDLVALLEELAHPTAPRVVIFDSADADFFFPHVDMTKVPEYTAEAAKAGGPGDASLGMLFRKLSQ-LPAVTIAKLR-GRA 114 (289)
T ss_dssp HHHHHHHHHTTSTTSCSEEEEEECSSSEEECSBCTTCHHHHHHHHHTTSSTTCCSHHHHHHHHHT-CSSEEEEEEC-SEE
T ss_pred HHHHHHHHHHhcCCCceEEEEECCCCCceeCCcCHHHHhhcCcchhhhHHHHHHHHHHHHHHHHh-CCCCEEEEEC-CEe
Confidence 345566665543 332 445555444444445455432 111123457777875 8899987775 544
No 43
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=41.62 E-value=15 Score=31.40 Aligned_cols=56 Identities=18% Similarity=0.303 Sum_probs=30.8
Q ss_pred HhCCCCEEEEEeeCCCCccccCCCCCCCCCC--HHHHHHHHHHHhhCCCceEEEEecCceeec
Q 039625 172 AAGTADVVVMVVGLDQSIEAEGLDKENLTLH--GYQEKLVMEVANATKGTMILVVMAAGNVDV 232 (238)
Q Consensus 172 ~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~--~~q~~li~~l~~~~~~~vVvV~~~g~P~~l 232 (238)
+.+++|+||++.|.+. .+|.+|.++-.- .-=.++++++.+.+++ .++++ ..+|+++
T Consensus 65 a~~~aDvVvi~ag~~~---~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~-a~viv-~sNPv~~ 122 (314)
T 1mld_A 65 CLKGCDVVVIPAGVPR---KPGMTRDDLFNTNATIVATLTAACAQHCPD-AMICI-ISNPVNS 122 (314)
T ss_dssp HHTTCSEEEECCSCCC---CTTCCGGGGHHHHHHHHHHHHHHHHHHCTT-SEEEE-CSSCHHH
T ss_pred HhCCCCEEEECCCcCC---CCCCcHHHHHHHHHHHHHHHHHHHHhhCCC-eEEEE-ECCCcch
Confidence 4679999999998653 334444433110 0112345555554444 33333 5899875
No 44
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=40.91 E-value=49 Score=26.71 Aligned_cols=55 Identities=18% Similarity=0.151 Sum_probs=37.9
Q ss_pred HHHHHHHHHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHHHHHHHh---------------hCCCceEEEEecCc
Q 039625 164 LLIEQAAKAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKLVMEVAN---------------ATKGTMILVVMAAG 228 (238)
Q Consensus 164 ~~~~~a~~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~li~~l~~---------------~~~~~vVvV~~~g~ 228 (238)
..+.+..+....||.+|+..-. -....|..=..+|+.+.. -.+|++++++.+|+
T Consensus 81 dd~~~~~~~l~~aD~iv~~~P~-----------y~~~~p~~lK~~iD~~~~~g~~~~~~~~~~~~~l~gK~~~~~~T~g~ 149 (228)
T 3tem_A 81 SDITDEQKKVREADLVIFQFPL-----------YWFSVPAILKGWMDRVLCQGFAFDIPGFYDSGLLQGKLALLSVTTGG 149 (228)
T ss_dssp HHHHHHHHHHHHCSEEEEEEEC-----------BTTBCCHHHHHHHHHHSCBTTTBCSSCCGGGCTTTTCEEEEEEECSS
T ss_pred HHHHHHHHHHHhCCEEEEECCh-----------hhcccCHHHHHHHHHHhhcCcccccCCCCCCCCCCCCEEEEEEeCCC
Confidence 4455667778899999987632 145667766677777631 24688888888888
Q ss_pred e
Q 039625 229 N 229 (238)
Q Consensus 229 P 229 (238)
|
T Consensus 150 ~ 150 (228)
T 3tem_A 150 T 150 (228)
T ss_dssp C
T ss_pred C
Confidence 7
No 45
>3k1y_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, CDR100D; 2.50A {Corynebacterium diphtheriae} PDB: 3k20_A
Probab=39.34 E-value=38 Score=26.69 Aligned_cols=55 Identities=15% Similarity=0.130 Sum_probs=37.4
Q ss_pred HHHHHHHHHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHHHHHHHh--hCCCceEEEEecCce
Q 039625 164 LLIEQAAKAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKLVMEVAN--ATKGTMILVVMAAGN 229 (238)
Q Consensus 164 ~~~~~a~~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~li~~l~~--~~~~~vVvV~~~g~P 229 (238)
..+.+..+...+||.+|++.-. -+..+|+.=..+|+.+.. -.+||++++..+|.+
T Consensus 74 ~~~~~~~~~i~~AD~ivi~sP~-----------Y~~~~~~~lK~~iD~~~~~~l~gK~~~~v~t~G~~ 130 (191)
T 3k1y_A 74 TKLEEITSALSASDGLVVATPV-----------FKASYTGLFKMFFDILDTDALTGMPTIIAATAGSA 130 (191)
T ss_dssp HHHHHHHHHHHHCSEEEEEEEC-----------BTTBSCHHHHHHHHHSCTTTTTTCEEEEEEEESSS
T ss_pred HHHHHHHHHHHHCCEEEEEcCc-----------cCCcCcHHHHHHHHHhhhhhcCCCEEEEEEeCCCc
Confidence 4577888888999999987632 256677766677877642 246877766655544
No 46
>2amj_A Modulator of drug activity B; oxidoreductase, menadione, DT-diaphorase, montreal-kingston structural genomics initiative, BSGI; 1.80A {Escherichia coli} PDB: 2b3d_A*
Probab=39.30 E-value=63 Score=25.42 Aligned_cols=54 Identities=13% Similarity=0.003 Sum_probs=36.7
Q ss_pred HHHHHHHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHHHHHHHh--------------------------hCCCc
Q 039625 166 IEQAAKAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKLVMEVAN--------------------------ATKGT 219 (238)
Q Consensus 166 ~~~a~~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~li~~l~~--------------------------~~~~~ 219 (238)
+.+..+...+||.+|++.=. -+..+|..=..+|+.+.. -.+|+
T Consensus 61 ~~~~~~~l~~AD~iV~~~P~-----------y~~s~pa~LK~~iDrv~~~g~~~~y~~~~~~~~~~~~~~g~~~~l~gK~ 129 (204)
T 2amj_A 61 VKAEVQNFLWADVVIWQMPG-----------WWMGAPWTVKKYIDDVFTEGHGTLYASDGRTRKDPSKKYGSGGLVQGKK 129 (204)
T ss_dssp HHHHHHHHHHCSEEEEEEEC-----------BTTBCCHHHHHHHHHHHHHTBTTTBSSSCC-------CTTCCBSCTTCE
T ss_pred HHHHHHHHHhCCEEEEECCc-----------cccCCCHHHHHHHHHHhhcCcceeeccCcccccccccccCcccccCCCe
Confidence 45667778899999987631 256677766677776521 13577
Q ss_pred eEEEEecCcee
Q 039625 220 MILVVMAAGNV 230 (238)
Q Consensus 220 vVvV~~~g~P~ 230 (238)
++++..+|+|-
T Consensus 130 ~~~i~t~g~~~ 140 (204)
T 2amj_A 130 YMLSLTWNAPM 140 (204)
T ss_dssp EEEEEECSSCT
T ss_pred EEEEEeCCCCh
Confidence 88888888873
No 47
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=39.10 E-value=38 Score=27.28 Aligned_cols=55 Identities=7% Similarity=0.009 Sum_probs=36.4
Q ss_pred HHHHHHHHHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHHHHHHHh------hCCCceEEEEecCce
Q 039625 164 LLIEQAAKAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKLVMEVAN------ATKGTMILVVMAAGN 229 (238)
Q Consensus 164 ~~~~~a~~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~li~~l~~------~~~~~vVvV~~~g~P 229 (238)
..+.+..+...+||.+|++.-. -+..+|+.=..+|+.+.. -.+||++++..+|++
T Consensus 68 ~~~~~~~~~l~~AD~iI~~sP~-----------y~~~~p~~lK~~iDr~~~~~~~~~l~gK~~~~i~t~g~~ 128 (242)
T 1sqs_A 68 DDGGVIKKELLESDIIIISSPV-----------YLQNVSVDTKNFIERIGGWSHLFRLAGKFVVTLDVAESN 128 (242)
T ss_dssp STHHHHHHHHHHCSEEEEEEEE-----------CSSSCCHHHHHHHHHTGGGTTTTTTTTCEEEEEEEESSC
T ss_pred HHHHHHHHHHHHCCEEEEEccc-----------cccCCCHHHHHHHHHHHHhccccccCCCEEEEEEeCCCC
Confidence 3456677778899999987642 145667766678887631 236777766666654
No 48
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=38.30 E-value=13 Score=32.04 Aligned_cols=53 Identities=30% Similarity=0.384 Sum_probs=26.0
Q ss_pred hCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHH----HHHHHHHhhCCCceEEEEecCceeec
Q 039625 173 AGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQE----KLVMEVANATKGTMILVVMAAGNVDV 232 (238)
Q Consensus 173 a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~----~li~~l~~~~~~~vVvV~~~g~P~~l 232 (238)
.++||+||++.|.+. .+|..|.++- .... ++++.+.+.+++ .++++ ..+|+++
T Consensus 70 ~~~aDvVii~ag~~~---~~g~~R~dl~--~~n~~i~~~i~~~i~~~~p~-a~iiv-~tNPv~~ 126 (318)
T 1ez4_A 70 CKDADLVVITAGAPQ---KPGESRLDLV--NKNLNILSSIVKPVVDSGFD-GIFLV-AANPVDI 126 (318)
T ss_dssp GTTCSEEEECCCC-------------CH--HHHHHHHHHHHHHHHHTTCC-SEEEE-CSSSHHH
T ss_pred hCCCCEEEECCCCCC---CCCCCHHHHH--HHHHHHHHHHHHHHHHhCCC-eEEEE-eCCcHHH
Confidence 679999999998543 3455555432 2222 344455553443 44344 5899865
No 49
>3u7r_A NADPH-dependent FMN reductase; alpha/beta twisted open-sheet, lavoprotein, quinone reductas oxidoreductase; HET: MSE FNR 2PE; 1.40A {Paracoccus denitrificans}
Probab=37.90 E-value=85 Score=24.61 Aligned_cols=55 Identities=9% Similarity=0.024 Sum_probs=37.4
Q ss_pred HHHHHHHHHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHHHHHHHh------hCCCceEEEEecCce
Q 039625 164 LLIEQAAKAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKLVMEVAN------ATKGTMILVVMAAGN 229 (238)
Q Consensus 164 ~~~~~a~~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~li~~l~~------~~~~~vVvV~~~g~P 229 (238)
..+.+..+..++||.+|++.-+ .+..+|+.=..+|+-+.. -.+||+.+|-.++++
T Consensus 56 ~~~~~l~~~i~~aD~~ii~tPe-----------Yn~s~pg~LKn~iDwlsr~~~~~~~~gKpv~~v~~S~G~ 116 (190)
T 3u7r_A 56 ESVLRLKDRIEHSDAVLAITPE-----------YNRSYPGMIKNAIDWATRPYGQNSWKGKPAAVIGTSPGV 116 (190)
T ss_dssp HHHHHHHHHHHTSSEEEEECCC-----------BTTBCCHHHHHHHHHHHCSTTCCTTTTCEEEEEEEESST
T ss_pred HHHHHHHHHHHhCCcEEEechh-----------hcccCCHHHHHHHHHhcccccCCccCCCEEEEEEeCCch
Confidence 4556677788899999988742 256678777777776641 136888766666554
No 50
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=37.19 E-value=24 Score=30.27 Aligned_cols=57 Identities=18% Similarity=0.317 Sum_probs=31.5
Q ss_pred HHhCCCCEEEEEeeCCCCccccCCCCCCCCCC--HHHHHHHHHHHhhCCCceEEEEecCceeec
Q 039625 171 KAAGTADVVVMVVGLDQSIEAEGLDKENLTLH--GYQEKLVMEVANATKGTMILVVMAAGNVDV 232 (238)
Q Consensus 171 ~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~--~~q~~li~~l~~~~~~~vVvV~~~g~P~~l 232 (238)
++.+++|+||++.|.+. .+|.+|.++..- ..-.++++++.+..++ .++++ +.+|+++
T Consensus 72 ~al~gaDvVi~~ag~~~---~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~-~~viv-~SNPv~~ 130 (326)
T 1smk_A 72 AALTGMDLIIVPAGVPR---KPGMTRDDLFKINAGIVKTLCEGIAKCCPR-AIVNL-ISNPVNS 130 (326)
T ss_dssp HHHTTCSEEEECCCCCC---CSSCCCSHHHHHHHHHHHHHHHHHHHHCTT-SEEEE-CCSSHHH
T ss_pred HHcCCCCEEEEcCCcCC---CCCCCHHHHHHHHHHHHHHHHHHHHhhCCC-eEEEE-ECCchHH
Confidence 44679999999998543 334344322111 1123455666654443 43333 5799875
No 51
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=37.02 E-value=66 Score=24.39 Aligned_cols=46 Identities=17% Similarity=0.177 Sum_probs=27.1
Q ss_pred hCCCCEEEEEeeCCCCccccCCCCCCCCCCHHH-----HHHHHHHHhhCCCceEEEEecCcee
Q 039625 173 AGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQ-----EKLVMEVANATKGTMILVVMAAGNV 230 (238)
Q Consensus 173 a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q-----~~li~~l~~~~~~~vVvV~~~g~P~ 230 (238)
....|+||+.+|.+ | +..+.++ .++|+.+.+..+... +++.+.-|+
T Consensus 72 ~~~pd~Vvi~~G~N--------D---~~~~~~~~~~~l~~ii~~l~~~~p~~~-ii~~~~~P~ 122 (200)
T 4h08_A 72 NTKFDVIHFNNGLH--------G---FDYTEEEYDKSFPKLIKIIRKYAPKAK-LIWANTTPV 122 (200)
T ss_dssp HSCCSEEEECCCSS--------C---TTSCHHHHHHHHHHHHHHHHHHCTTCE-EEEECCCCC
T ss_pred cCCCCeEEEEeeeC--------C---CCCCHHHHHHHHHHHHHHHhhhCCCcc-EEEeccCCC
Confidence 46899999999965 2 2334332 467777766554433 344444454
No 52
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=36.63 E-value=7.7 Score=33.53 Aligned_cols=54 Identities=15% Similarity=0.400 Sum_probs=30.4
Q ss_pred HhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHH----HHHHHHHHhhCCCceEEEEecCceeec
Q 039625 172 AAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQ----EKLVMEVANATKGTMILVVMAAGNVDV 232 (238)
Q Consensus 172 ~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q----~~li~~l~~~~~~~vVvV~~~g~P~~l 232 (238)
..++||+||++.|.+. .+|..|.++ -... .++++++.+.+++ .++++ .++|+++
T Consensus 70 a~~~aDvVIi~ag~p~---k~G~~R~dl--~~~N~~i~~~i~~~i~~~~p~-a~viv-vtNPvd~ 127 (321)
T 3p7m_A 70 DLENSDVVIVTAGVPR---KPGMSRDDL--LGINIKVMQTVGEGIKHNCPN-AFVIC-ITNPLDI 127 (321)
T ss_dssp GGTTCSEEEECCSCCC---CTTCCHHHH--HHHHHHHHHHHHHHHHHHCTT-CEEEE-CCSSHHH
T ss_pred HHCCCCEEEEcCCcCC---CCCCCHHHH--HHHhHHHHHHHHHHHHHHCCC-cEEEE-ecCchHH
Confidence 4679999999998542 334444321 1111 2445566664543 44444 4799865
No 53
>2qlc_A DNA repair protein RADC homolog; MCSG, structural genomics, PSI-2, structure initiative; HET: DNA; 2.30A {Chlorobium tepidum tls}
Probab=34.83 E-value=37 Score=25.17 Aligned_cols=38 Identities=24% Similarity=0.296 Sum_probs=26.5
Q ss_pred HHHHHHHhcCcceeEeecccCCCccc-ccCHHHHHHHHHH
Q 039625 44 PFKSCVKESHVSSVICSYNRVIGIPT-CADPDLLKGVIKS 82 (238)
Q Consensus 44 PF~~ai~~g~~~~VM~sy~~vng~pa-~~s~~ll~~lLR~ 82 (238)
-|+.|++.+.. +|..+||-..|.|- +....-+|.-|++
T Consensus 59 i~~~Al~~~A~-~vIl~HNHPSG~~~PS~~D~~~T~~l~~ 97 (126)
T 2qlc_A 59 IFKAAIRESAH-SIILVHNHPSGDVQPSNADKQVTSILKK 97 (126)
T ss_dssp HHHHHHHTTCS-EEEEEEECSSSCCSCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCc-EEEEEecCCCCCCCCCHHHHHHHHHHHH
Confidence 48999999875 99999998877543 2333345655554
No 54
>1cbf_A Cobalt-precorrin-4 transmethylase; precorrin-4 methyltransferase, cobalamin biosynth methyltransferase; HET: SAH; 2.40A {Bacillus megaterium} SCOP: c.90.1.1 PDB: 2cbf_A*
Probab=34.65 E-value=66 Score=26.75 Aligned_cols=40 Identities=30% Similarity=0.467 Sum_probs=26.3
Q ss_pred CCCCCCCCCCCcEEEEccCCCchhhhHHHHHHHHHhCCCCEEEE
Q 039625 138 GALPLSSNNTKNLAVIGSNANATNRRLLIEQAAKAAGTADVVVM 181 (238)
Q Consensus 138 ~~LPL~~~~~~~i~viG~~a~~~~~~~~~~~a~~~a~~aD~vIv 181 (238)
++.|-... .+|.++|-...++. ...-+|++.+++||+++.
T Consensus 13 ~~~~~~~~--~~l~lVG~GpGd~~--~LT~~A~~~L~~AdvV~~ 52 (285)
T 1cbf_A 13 GLVPRGSH--MKLYIIGAGPGDPD--LITVKGLKLLQQADVVLY 52 (285)
T ss_dssp CCSCCSTT--SEEEEEECBSSCGG--GSCHHHHHHHHHCSEEEE
T ss_pred ccccCCCC--CEEEEEecCCCCHH--HHHHHHHHHHHhCCEEEE
Confidence 34454333 68999987655432 233578888999999874
No 55
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=33.72 E-value=71 Score=28.87 Aligned_cols=16 Identities=25% Similarity=0.407 Sum_probs=13.3
Q ss_pred HhCCCCEEEEEeeCCC
Q 039625 172 AAGTADVVVMVVGLDQ 187 (238)
Q Consensus 172 ~a~~aD~vIv~~g~~~ 187 (238)
+++.+|++|++++++.
T Consensus 94 ai~~ad~~~I~VpTP~ 109 (444)
T 3vtf_A 94 AVAATDATFIAVGTPP 109 (444)
T ss_dssp HHHTSSEEEECCCCCB
T ss_pred HHhcCCceEEEecCCC
Confidence 4678999999999764
No 56
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=33.57 E-value=10 Score=32.36 Aligned_cols=53 Identities=17% Similarity=0.397 Sum_probs=26.6
Q ss_pred hCCCCEEEEEeeCCCCccccCCCCCCCCCCHHH----HHHHHHHHhhCCCceEEEEecCceeec
Q 039625 173 AGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQ----EKLVMEVANATKGTMILVVMAAGNVDV 232 (238)
Q Consensus 173 a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q----~~li~~l~~~~~~~vVvV~~~g~P~~l 232 (238)
.++||+||+++|.+. .+|.+|.++. ... .++.+++.+.++ ..++++ ..+|+++
T Consensus 68 ~~~aD~Vi~a~g~p~---~~g~~r~dl~--~~n~~i~~~i~~~i~~~~p-~a~vi~-~tNPv~~ 124 (309)
T 1ur5_A 68 TANSDVIVVTSGAPR---KPGMSREDLI--KVNADITRACISQAAPLSP-NAVIIM-VNNPLDA 124 (309)
T ss_dssp GTTCSEEEECCCC-----------CHHH--HHHHHHHHHHHHHHGGGCT-TCEEEE-CCSSHHH
T ss_pred HCCCCEEEEcCCCCC---CCCCCHHHHH--HHHHHHHHHHHHHHHhhCC-CeEEEE-cCCchHH
Confidence 679999999998653 3344444321 111 244455555343 354444 5889864
No 57
>4dhe_A Probable GTP-binding protein ENGB; melioidosis, RAS-like GTPase, cell division, cell cycle, SEP GTP-binding; 2.20A {Burkholderia thailandensis}
Probab=32.73 E-value=1.2e+02 Score=23.26 Aligned_cols=46 Identities=7% Similarity=0.073 Sum_probs=28.8
Q ss_pred HHHHHHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHHHHHHHhhCCCceEEEEe
Q 039625 167 EQAAKAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKLVMEVANATKGTMILVVM 225 (238)
Q Consensus 167 ~~a~~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~li~~l~~~~~~~vVvV~~ 225 (238)
......+..+|++|+++-... .+.....++++.+.. .++|+|+|++
T Consensus 107 ~~~~~~~~~~d~vi~v~d~~~------------~~~~~~~~~~~~l~~-~~~p~i~v~n 152 (223)
T 4dhe_A 107 SSYLQTRPQLCGMILMMDARR------------PLTELDRRMIEWFAP-TGKPIHSLLT 152 (223)
T ss_dssp HHHHHHCTTEEEEEEEEETTS------------CCCHHHHHHHHHHGG-GCCCEEEEEE
T ss_pred HHHHhcCcCcCEEEEEEeCCC------------CCCHHHHHHHHHHHh-cCCCEEEEEe
Confidence 345556677888988885321 123445566776665 5678887765
No 58
>1ega_A Protein (GTP-binding protein ERA); GTPase, RNA-binding, RAS-like, hydrolase; 2.40A {Escherichia coli} SCOP: c.37.1.8 d.52.3.1 PDB: 1x1l_X 3ieu_A* 1x18_X
Probab=32.45 E-value=51 Score=27.63 Aligned_cols=41 Identities=22% Similarity=0.306 Sum_probs=24.7
Q ss_pred HHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHHHHHHHhhCCCceEEEEe
Q 039625 171 KAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKLVMEVANATKGTMILVVM 225 (238)
Q Consensus 171 ~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~li~~l~~~~~~~vVvV~~ 225 (238)
..++.+|++++++-. .+ +...+..+++.+.. .++|+|+|++
T Consensus 84 ~~l~~~D~vl~Vvd~-----------~~--~~~~~~~i~~~l~~-~~~P~ilvlN 124 (301)
T 1ega_A 84 SSIGDVELVIFVVEG-----------TR--WTPDDEMVLNKLRE-GKAPVILAVN 124 (301)
T ss_dssp SCCCCEEEEEEEEET-----------TC--CCHHHHHHHHHHHS-SSSCEEEEEE
T ss_pred HHHhcCCEEEEEEeC-----------CC--CCHHHHHHHHHHHh-cCCCEEEEEE
Confidence 345678888877632 12 34445556666653 4677877765
No 59
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=32.20 E-value=20 Score=30.91 Aligned_cols=56 Identities=13% Similarity=0.250 Sum_probs=31.5
Q ss_pred HhCCCCEEEEEeeCCCCccccCCCCCCCCCCH--HHHHHHHHHHhhCCCceEEEEecCceeec
Q 039625 172 AAGTADVVVMVVGLDQSIEAEGLDKENLTLHG--YQEKLVMEVANATKGTMILVVMAAGNVDV 232 (238)
Q Consensus 172 ~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~--~q~~li~~l~~~~~~~vVvV~~~g~P~~l 232 (238)
..++||+||+++|.+. .+|..|.++..-. --.++.+++.+.++ ..++++ ..+|.++
T Consensus 79 al~~aD~VI~avg~p~---k~g~tr~dl~~~n~~i~~~i~~~i~~~~p-~a~viv-~tNP~~~ 136 (328)
T 2hjr_A 79 YLQNSDVVIITAGVPR---KPNMTRSDLLTVNAKIVGSVAENVGKYCP-NAFVIC-ITNPLDA 136 (328)
T ss_dssp GGTTCSEEEECCSCCC---CTTCCSGGGHHHHHHHHHHHHHHHHHHCT-TCEEEE-CCSSHHH
T ss_pred HHCCCCEEEEcCCCCC---CCCCchhhHHhhhHHHHHHHHHHHHHHCC-CeEEEE-ecCchHH
Confidence 3679999999998543 4454554331100 01244555665454 455444 5789764
No 60
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=31.71 E-value=18 Score=30.84 Aligned_cols=53 Identities=26% Similarity=0.360 Sum_probs=29.7
Q ss_pred hCCCCEEEEEeeCCCCccccCCCCCCCCCCHHH----HHHHHHHHhhCCCceEEEEecCceeec
Q 039625 173 AGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQ----EKLVMEVANATKGTMILVVMAAGNVDV 232 (238)
Q Consensus 173 a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q----~~li~~l~~~~~~~vVvV~~~g~P~~l 232 (238)
.++||+||+++|.+. .+|.+|.++ -... .++++++.+.++. .++++ .++|+++
T Consensus 72 l~~aDvViia~~~~~---~~g~~r~dl--~~~n~~i~~~i~~~i~~~~p~-a~~iv-~tNPv~~ 128 (316)
T 1ldn_A 72 CRDADLVVICAGANQ---KPGETRLDL--VDKNIAIFRSIVESVMASGFQ-GLFLV-ATNPVDI 128 (316)
T ss_dssp TTTCSEEEECCSCCC---CTTTCSGGG--HHHHHHHHHHHHHHHHHHTCC-SEEEE-CSSSHHH
T ss_pred hCCCCEEEEcCCCCC---CCCCCHHHH--HHcChHHHHHHHHHHHHHCCC-CEEEE-eCCchHH
Confidence 679999999998543 334455332 1122 2344555554443 44333 5899864
No 61
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=31.34 E-value=14 Score=31.58 Aligned_cols=56 Identities=21% Similarity=0.382 Sum_probs=30.9
Q ss_pred HhCCCCEEEEEeeCCCCccccCCCCCCCCCCHH--HHHHHHHHHhhCCCceEEEEecCceeec
Q 039625 172 AAGTADVVVMVVGLDQSIEAEGLDKENLTLHGY--QEKLVMEVANATKGTMILVVMAAGNVDV 232 (238)
Q Consensus 172 ~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~--q~~li~~l~~~~~~~vVvV~~~g~P~~l 232 (238)
..++||+||++.|.+. .+|..|.++-.-.- =.++++++.+.++. .++++ ..+|+++
T Consensus 64 a~~~aD~Vi~~ag~~~---k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~-a~iiv-~tNPv~~ 121 (308)
T 2d4a_B 64 DMRGSDIVLVTAGIGR---KPGMTREQLLEANANTMADLAEKIKAYAKD-AIVVI-TTNPVDA 121 (308)
T ss_dssp GGTTCSEEEECCSCCC---CSSCCTHHHHHHHHHHHHHHHHHHHHHCTT-CEEEE-CCSSHHH
T ss_pred HhCCCCEEEEeCCCCC---CCCCcHHHHHHHHHHHHHHHHHHHHHHCCC-eEEEE-eCCchHH
Confidence 3679999999988543 34555543211111 12445556554443 44344 4889864
No 62
>3gfs_A FMN-dependent NADPH-azoreductase; flavoproteins, quinone reductase, flavodoxin, oligomerization, flavoprotein, oxidoreductase; HET: FMN; 2.10A {Bacillus subtilis} SCOP: c.23.5.4 PDB: 1nni_1* 2gsw_A* 3gfr_A* 3gfq_A*
Probab=31.11 E-value=55 Score=24.72 Aligned_cols=55 Identities=15% Similarity=0.199 Sum_probs=35.0
Q ss_pred HHHHHHHHHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHHHHHHH--hhCCCceEEEEecCce
Q 039625 164 LLIEQAAKAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKLVMEVA--NATKGTMILVVMAAGN 229 (238)
Q Consensus 164 ~~~~~a~~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~li~~l~--~~~~~~vVvV~~~g~P 229 (238)
..+.+..+...+||.+|++.-. -+..+|+.=..+|+.+. .-.+||+.++..+|+.
T Consensus 52 ~~~~~~~~~i~~aD~ii~~tP~-----------y~~~~p~~lk~~lD~l~~~~~~gK~~~~~~~sgg~ 108 (174)
T 3gfs_A 52 LKVQELKQRVTKADAIVLLSPE-----------YHSGMSGALKNALDFLSSEQFKYKPVALLAVAGGG 108 (174)
T ss_dssp HHHHHHHHHHHHCSSEEEEEEC-----------SSSSCCHHHHHHHHTCCHHHHTTCEEEEEEECCST
T ss_pred HHHHHHHHHHHHCCEEEEEcCC-----------cCCCCCHHHHHHHHHhCHhhhCCCcEEEEEECCCC
Confidence 4566777888899999887642 14556766666666442 1236777766655554
No 63
>3nbk_A Phosphopantetheine adenylyltransferase; PPAT, PHP; HET: PNS; 1.58A {Mycobacterium tuberculosis} PDB: 3nba_A* 3pnb_A* 4e1a_A 3lcj_A 3rba_A* 1tfu_A* 3rff_A 3rhs_A* 3uc5_A*
Probab=30.89 E-value=1.7e+02 Score=22.73 Aligned_cols=72 Identities=19% Similarity=0.183 Sum_probs=33.4
Q ss_pred CCCCCCCCCCCcEEEEccCCCchhh--hHHHHHHHHHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHH-HHHHHHHh
Q 039625 138 GALPLSSNNTKNLAVIGSNANATNR--RLLIEQAAKAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQE-KLVMEVAN 214 (238)
Q Consensus 138 ~~LPL~~~~~~~i~viG~~a~~~~~--~~~~~~a~~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~-~li~~l~~ 214 (238)
++.|.... .|++++|..-+.... -..+++|.+. .|-+||.++.++ .+.. -++..++ ++++...+
T Consensus 13 ~~~~~~~~--mki~i~~GsFDPiH~GHl~ii~~A~~~---~D~Viv~v~~np-------~K~~-~~s~eeR~~mv~~a~~ 79 (177)
T 3nbk_A 13 GLVPRGSH--MTGAVCPGSFDPVTLGHVDIFERAAAQ---FDEVVVAILVNP-------AKTG-MFDLDERIAMVKESTT 79 (177)
T ss_dssp -------C--CCEEEEEECCTTCCHHHHHHHHHHHHH---SSEEEEEECCCT-------TSCC-SSCHHHHHHHHHHHCT
T ss_pred CcccCCCC--CEEEEEEEeeCCCCHHHHHHHHHHHHH---CCEEEEEEcCCC-------CCCC-CCCHHHHHHHHHHHhC
Confidence 56787765 678877654443321 2334445444 488888887543 1122 3455444 66776544
Q ss_pred hCCCceEEE
Q 039625 215 ATKGTMILV 223 (238)
Q Consensus 215 ~~~~~vVvV 223 (238)
..+ .+.|.
T Consensus 80 ~~~-~v~V~ 87 (177)
T 3nbk_A 80 HLP-NLRVQ 87 (177)
T ss_dssp TCT-TEEEE
T ss_pred CCC-CEEEE
Confidence 233 35433
No 64
>2ybo_A Methyltransferase; SUMT, NIRE, heme D1 biosynthesis; HET: SAH; 2.00A {Pseudomonas aeruginosa} PDB: 2ybq_A*
Probab=30.52 E-value=1e+02 Score=25.88 Aligned_cols=32 Identities=28% Similarity=0.357 Sum_probs=23.0
Q ss_pred CcEEEEccCCCchhhhHHHHHHHHHhCCCCEEEE
Q 039625 148 KNLAVIGSNANATNRRLLIEQAAKAAGTADVVVM 181 (238)
Q Consensus 148 ~~i~viG~~a~~~~~~~~~~~a~~~a~~aD~vIv 181 (238)
.+|.++|-...++. ...-+|++.+++||+|+.
T Consensus 25 g~l~lVG~GpGdp~--lLTlrA~~~L~~ADvV~~ 56 (294)
T 2ybo_A 25 GSVALVGAGPGDPG--LLTLRAWALLQQAEVVVY 56 (294)
T ss_dssp TCEEEEEEESSCGG--GSCHHHHHHHTTCSEEEE
T ss_pred CEEEEEecCCCCHH--HHHHHHHHHHHcCCEEEE
Confidence 57999886654432 233578999999999885
No 65
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=30.49 E-value=58 Score=26.72 Aligned_cols=56 Identities=9% Similarity=0.059 Sum_probs=36.2
Q ss_pred hHHHHHHHHHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHHHHHHHh-------hCCCceEEEEecCce
Q 039625 163 RLLIEQAAKAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKLVMEVAN-------ATKGTMILVVMAAGN 229 (238)
Q Consensus 163 ~~~~~~a~~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~li~~l~~-------~~~~~vVvV~~~g~P 229 (238)
...+.+..+...+||.+|++.-. -+..+|+.=..+|+.+.. -.+||+.++..+|++
T Consensus 86 ~d~~~~l~~~i~~AD~iI~~sP~-----------Yn~sipa~LKn~iD~l~~~~~~~~~l~gK~v~~v~tsG~~ 148 (247)
T 2q62_A 86 HPKVQELRELSIWSEGQVWVSPE-----------RHGAMTGIMKAQIDWIPLSTGSIRPTQGKTLAVMQVSGGS 148 (247)
T ss_dssp SHHHHHHHHHHHHCSEEEEEEEC-----------SSSSCCHHHHHHHHTSCSCBTTBCSSTTCEEEEEEECSSS
T ss_pred CHHHHHHHHHHHHCCEEEEEeCC-----------CCCCccHHHHHHHHHhhhccCcccccCCCEEEEEEeCCCc
Confidence 34567788888899999987632 145666666667776532 136777666655543
No 66
>1wf3_A GTP-binding protein; GTPase, riken structural genomics/prote initiative, RSGI, structural genomics, hydrolase; HET: GNP; 1.88A {Thermus thermophilus} SCOP: c.37.1.8 d.52.3.1
Probab=30.11 E-value=1.4e+02 Score=24.96 Aligned_cols=46 Identities=22% Similarity=0.188 Sum_probs=28.5
Q ss_pred HHHHHHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHHHHHHHhhC--CCceEEEEe
Q 039625 167 EQAAKAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKLVMEVANAT--KGTMILVVM 225 (238)
Q Consensus 167 ~~a~~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~li~~l~~~~--~~~vVvV~~ 225 (238)
..+....+.+|++|+++-... + +......+++.+.. . +.|+|+|++
T Consensus 78 ~~~~~~l~~ad~il~VvD~~~--------~----~~~~~~~i~~~l~~-~~~~~p~ilV~N 125 (301)
T 1wf3_A 78 QEVYEALADVNAVVWVVDLRH--------P----PTPEDELVARALKP-LVGKVPILLVGN 125 (301)
T ss_dssp HHHHHHTSSCSEEEEEEETTS--------C----CCHHHHHHHHHHGG-GTTTSCEEEEEE
T ss_pred HHHHHHHhcCCEEEEEEECCC--------C----CChHHHHHHHHHHh-hcCCCCEEEEEE
Confidence 455677899999999985321 1 22333445555654 3 678887775
No 67
>3clv_A RAB5 protein, putative; malaria, GTPase, structural genomics, GTP-binding, nucleotide-binding, signaling protein; HET: GDP; 1.89A {Plasmodium falciparum}
Probab=29.90 E-value=57 Score=24.25 Aligned_cols=46 Identities=13% Similarity=0.133 Sum_probs=25.7
Q ss_pred HHHHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHHHHHHHhhCCCceEEEEe
Q 039625 169 AAKAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKLVMEVANATKGTMILVVM 225 (238)
Q Consensus 169 a~~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~li~~l~~~~~~~vVvV~~ 225 (238)
.....+.+|++|+++-... . .+ .....+++..+....+.|+|+|++
T Consensus 110 ~~~~~~~~d~~i~v~D~~~---~-----~s---~~~~~~~~~~i~~~~~~piilv~N 155 (208)
T 3clv_A 110 VPLYYRGATCAIVVFDISN---S-----NT---LDRAKTWVNQLKISSNYIIILVAN 155 (208)
T ss_dssp HHHHHTTCSEEEEEEETTC---H-----HH---HHHHHHHHHHHHHHSCCEEEEEEE
T ss_pred HHHHhcCCCEEEEEEECCC---H-----HH---HHHHHHHHHHHHhhCCCcEEEEEE
Confidence 3445678999998885321 0 00 012234566665545677777665
No 68
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=29.89 E-value=1.3e+02 Score=24.21 Aligned_cols=53 Identities=19% Similarity=0.036 Sum_probs=34.4
Q ss_pred HHHHHHHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHHHHHHHhh--------------------------CCCc
Q 039625 166 IEQAAKAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKLVMEVANA--------------------------TKGT 219 (238)
Q Consensus 166 ~~~a~~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~li~~l~~~--------------------------~~~~ 219 (238)
+++..+....||.+|+..-. -....|..-..+++.+... .+|+
T Consensus 74 v~~~~~~l~~aD~iv~~~P~-----------y~~~~p~~lK~~iD~v~~~g~af~y~~~g~~~~~p~~~yG~~glL~gKk 142 (218)
T 3rpe_A 74 IESEIENYLWADTIIYQMPA-----------WWMGEPWILKKYIDEVFTDGHGRLYQSDGRTRSDATKGYGSGGLIQGKT 142 (218)
T ss_dssp HHHHHHHHHHCSEEEEEEEC-----------BTTBCCHHHHHHHHHHHHHTBTTTBCCCSCCSTTTTSCTTCCBSCTTCE
T ss_pred HHHHHHHHHhCCEEEEECCh-----------HhccCCHHHHHHHHHHHhcCcceeeccccccccccccccCCccCCCCCE
Confidence 45566777889998887531 1355566555666655221 3577
Q ss_pred eEEEEecCce
Q 039625 220 MILVVMAAGN 229 (238)
Q Consensus 220 vVvV~~~g~P 229 (238)
+++++.+|.|
T Consensus 143 ~~li~T~G~p 152 (218)
T 3rpe_A 143 YMLSVTWNAP 152 (218)
T ss_dssp EEEEEECSSC
T ss_pred EEEEEcCCCC
Confidence 8888888988
No 69
>3qq5_A Small GTP-binding protein; hydrogenase, H-cluster, HYDA maturation, GTP-binding domain, maturation enzyme, oxidoreductase; 2.99A {Thermotoga neapolitana}
Probab=28.33 E-value=1.2e+02 Score=27.09 Aligned_cols=46 Identities=20% Similarity=0.237 Sum_probs=31.4
Q ss_pred HHHHHHHHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHHHHHHHhhCCCceEEEEe
Q 039625 165 LIEQAAKAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKLVMEVANATKGTMILVVM 225 (238)
Q Consensus 165 ~~~~a~~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~li~~l~~~~~~~vVvV~~ 225 (238)
.++........+|.+|+++-. .......++++.+.+ .+.|+|+|++
T Consensus 103 ~~~~~~~~l~~aD~vllVvD~--------------~~~~~~~~~l~~l~~-~~~piIvV~N 148 (423)
T 3qq5_A 103 RVEKARRVFYRADCGILVTDS--------------APTPYEDDVVNLFKE-MEIPFVVVVN 148 (423)
T ss_dssp CHHHHHHHHTSCSEEEEECSS--------------SCCHHHHHHHHHHHH-TTCCEEEECC
T ss_pred HHHHHHHHHhcCCEEEEEEeC--------------CChHHHHHHHHHHHh-cCCCEEEEEe
Confidence 345667778899999999831 223445567777776 5788877665
No 70
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=28.18 E-value=18 Score=31.10 Aligned_cols=58 Identities=14% Similarity=0.189 Sum_probs=30.3
Q ss_pred HHhCCCCEEEEEeeCCCCccccCCCCCCCCCC--HHHHHHHHHHHhhCCCceEEEEecCceeec
Q 039625 171 KAAGTADVVVMVVGLDQSIEAEGLDKENLTLH--GYQEKLVMEVANATKGTMILVVMAAGNVDV 232 (238)
Q Consensus 171 ~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~--~~q~~li~~l~~~~~~~vVvV~~~g~P~~l 232 (238)
++.+++|+||.+.|.+. .+|.+|..+..- ..-.++++++.+.++...++++. .+|+++
T Consensus 79 ~al~~aD~Vi~~ag~~~---~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~-SNPv~~ 138 (329)
T 1b8p_A 79 TAFKDADVALLVGARPR---GPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVV-GNPANT 138 (329)
T ss_dssp HHTTTCSEEEECCCCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEEC-SSSHHH
T ss_pred HHhCCCCEEEEeCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEc-cCchHH
Confidence 34679999999988543 233333221100 01234666676643223444444 599854
No 71
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=27.47 E-value=15 Score=31.37 Aligned_cols=55 Identities=29% Similarity=0.364 Sum_probs=29.0
Q ss_pred hCCCCEEEEEeeCCCCccccCCCCCCCCCCHH--HHHHHHHHHhhCCCceEEEEecCceeec
Q 039625 173 AGTADVVVMVVGLDQSIEAEGLDKENLTLHGY--QEKLVMEVANATKGTMILVVMAAGNVDV 232 (238)
Q Consensus 173 a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~--q~~li~~l~~~~~~~vVvV~~~g~P~~l 232 (238)
.++||+||+++|.+. .+|.+|.++-.... =.++.+.+.+.+++ .++++ ..+|+++
T Consensus 72 ~~~aDvVvi~ag~~~---~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~-a~viv-~tNPv~~ 128 (317)
T 3d0o_A 72 CHDADLVVICAGAAQ---KPGETRLDLVSKNLKIFKSIVGEVMASKFD-GIFLV-ATNPVDI 128 (317)
T ss_dssp GTTCSEEEECCCCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHTTCC-SEEEE-CSSSHHH
T ss_pred hCCCCEEEECCCCCC---CCCCcHHHHHHHHHHHHHHHHHHHHHhCCC-cEEEE-ecCcHHH
Confidence 679999999998643 23434432211110 12334455553443 44444 5799864
No 72
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=26.86 E-value=32 Score=29.52 Aligned_cols=57 Identities=14% Similarity=0.259 Sum_probs=30.7
Q ss_pred HhCCCCEEEEEeeCCCCccc--cCCCCCCCCCCHH----HHHHHHHHHhhCCCceEEEEecCceeec
Q 039625 172 AAGTADVVVMVVGLDQSIEA--EGLDKENLTLHGY----QEKLVMEVANATKGTMILVVMAAGNVDV 232 (238)
Q Consensus 172 ~a~~aD~vIv~~g~~~~~~~--eg~Dr~~l~l~~~----q~~li~~l~~~~~~~vVvV~~~g~P~~l 232 (238)
..++||+||+++|.+..... .|..|. .+-.. =.++.+++.+.++ ..+++ ...+|.++
T Consensus 75 a~~~aDiVi~a~g~p~~~g~~~~~~~r~--dl~~~n~~i~~~i~~~i~~~~p-~a~vi-~~tNP~~~ 137 (331)
T 1pzg_A 75 ALTGADCVIVTAGLTKVPGKPDSEWSRN--DLLPFNSKIIREIGQNIKKYCP-KTFII-VVTNPLDC 137 (331)
T ss_dssp HHTTCSEEEECCSCSSCTTCCGGGCCGG--GGHHHHHHHHHHHHHHHHHHCT-TCEEE-ECCSSHHH
T ss_pred HhCCCCEEEEccCCCCCCCcccCCCCHH--HHHHHHHHHHHHHHHHHHHHCC-CcEEE-EEcCchHH
Confidence 46799999999985532111 111332 22211 2345566666454 45544 45889764
No 73
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=26.58 E-value=22 Score=30.07 Aligned_cols=55 Identities=25% Similarity=0.393 Sum_probs=24.9
Q ss_pred hCCCCEEEEEeeCCCCccccCCCCCCCCCCHH--HHHHHHHHHhhCCCceEEEEecCceeec
Q 039625 173 AGTADVVVMVVGLDQSIEAEGLDKENLTLHGY--QEKLVMEVANATKGTMILVVMAAGNVDV 232 (238)
Q Consensus 173 a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~--q~~li~~l~~~~~~~vVvV~~~g~P~~l 232 (238)
.++||+||+++|.+. .+|..|.++-...- =.++++++.+.++ ..++++ ..+|.++
T Consensus 65 ~~~aDvVIi~~~~~~---~~g~~r~dl~~~n~~i~~~i~~~i~~~~p-~~~vi~-~tNP~~~ 121 (304)
T 2v6b_A 65 LADAQVVILTAGANQ---KPGESRLDLLEKNADIFRELVPQITRAAP-DAVLLV-TSNPVDL 121 (304)
T ss_dssp GTTCSEEEECC---------------CHHHHHHHHHHHHHHHHHHCS-SSEEEE-CSSSHHH
T ss_pred hCCCCEEEEcCCCCC---CCCCcHHHHHHhHHHHHHHHHHHHHHhCC-CeEEEE-ecCchHH
Confidence 679999999998542 33445544321111 1344555665443 354444 5788764
No 74
>2ppv_A Uncharacterized protein; putative phosphotransferase, structural genomics, joint CENT structural genomics, JCSG; 2.00A {Staphylococcus epidermidis}
Probab=26.50 E-value=45 Score=29.06 Aligned_cols=35 Identities=20% Similarity=0.216 Sum_probs=21.1
Q ss_pred CCCcEEEEccCCCchhhhHHHHHHHHHhCCCCEEEEEeeCC
Q 039625 146 NTKNLAVIGSNANATNRRLLIEQAAKAAGTADVVVMVVGLD 186 (238)
Q Consensus 146 ~~~~i~viG~~a~~~~~~~~~~~a~~~a~~aD~vIv~~g~~ 186 (238)
+.++|.+.+..+... .+++++..+||+||+.-|+.
T Consensus 154 ~i~~v~l~p~~~~~~------p~~l~AI~~AD~IvlgPGS~ 188 (332)
T 2ppv_A 154 KIDRVFLEPSDVEPM------NEAIEALEQADLIVLGPGSL 188 (332)
T ss_dssp CEEEEEEESCCCCCC------HHHHHHHHHCSEEEECSSCC
T ss_pred CceEEEEeCCCCCCC------HHHHHHHHhCCEEEECCCCC
Confidence 345566655333222 36777778888888776643
No 75
>2p0y_A Hypothetical protein LP_0780; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 3.00A {Lactobacillus plantarum}
Probab=26.47 E-value=40 Score=29.45 Aligned_cols=20 Identities=25% Similarity=0.174 Sum_probs=14.5
Q ss_pred HHHHHHhCCCCEEEEEeeCC
Q 039625 167 EQAAKAAGTADVVVMVVGLD 186 (238)
Q Consensus 167 ~~a~~~a~~aD~vIv~~g~~ 186 (238)
.+++++.++||+||+.-|+.
T Consensus 180 p~al~AI~~AD~IvlgPGSl 199 (341)
T 2p0y_A 180 QPVIDAIMAADQIVLGPGSL 199 (341)
T ss_dssp HHHHHHHHHCSEEEECSSCC
T ss_pred HHHHHHHHhCCEEEECCCCC
Confidence 46777778888888776643
No 76
>4fzw_C 1,2-epoxyphenylacetyl-COA isomerase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=25.99 E-value=1.6e+02 Score=24.37 Aligned_cols=21 Identities=24% Similarity=0.159 Sum_probs=14.8
Q ss_pred HHHHHHHhhCCCceEEEEecCce
Q 039625 207 KLVMEVANATKGTMILVVMAAGN 229 (238)
Q Consensus 207 ~li~~l~~~~~~~vVvV~~~g~P 229 (238)
+++..+.. ++||||..++ |..
T Consensus 102 ~l~~~l~~-~~kPvIAav~-G~a 122 (274)
T 4fzw_C 102 PLVRRLAK-LPKPVICAVN-GVA 122 (274)
T ss_dssp HHHHHHHH-CSSCEEEEEC-SCE
T ss_pred HHHHHHHH-CCCCEEEEEC-Cce
Confidence 45666775 8999987775 544
No 77
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=25.78 E-value=1.4e+02 Score=25.02 Aligned_cols=46 Identities=11% Similarity=0.127 Sum_probs=28.5
Q ss_pred CCCCCCCCCCCcEEEEccCCCchhh-------------hHHHHHHHHHhCCCCEEEEEeeC
Q 039625 138 GALPLSSNNTKNLAVIGSNANATNR-------------RLLIEQAAKAAGTADVVVMVVGL 185 (238)
Q Consensus 138 ~~LPL~~~~~~~i~viG~~a~~~~~-------------~~~~~~a~~~a~~aD~vIv~~g~ 185 (238)
+.+||+.. .-|.-|-.+...... ....+++.+.++.+|++++-.|.
T Consensus 10 ~~~~~~~~--Plvh~iTN~V~~n~~AN~~La~GasP~M~~~~~e~~e~~~~a~alvIn~G~ 68 (273)
T 3dzv_A 10 TIFPLTTA--PLIQCITNEITCESMANALLYIDAKPIMADDPREFPQMFQQTSALVLNLGH 68 (273)
T ss_dssp GTCSCCSC--CEEEEECCTTTHHHHHHHHHHTTCEEECCCCGGGHHHHHTTCSEEEEECCS
T ss_pred ccccCCCC--CEEEEecCcchhhhHHHHHHHcCCchhhcCCHHHHHHHHHHCCeEEEecCC
Confidence 57999875 334444443321111 23346777788899999988883
No 78
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=25.77 E-value=1e+02 Score=23.34 Aligned_cols=49 Identities=2% Similarity=-0.148 Sum_probs=29.6
Q ss_pred HHHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHHHHHHHh------hCCCceEEEEecCce
Q 039625 170 AKAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKLVMEVAN------ATKGTMILVVMAAGN 229 (238)
Q Consensus 170 ~~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~li~~l~~------~~~~~vVvV~~~g~P 229 (238)
.....++|.+|++.-. + ...+|+.=..+|+.+.. -.+||++++..+|++
T Consensus 66 ~~~l~~aD~ii~gsP~---y--------~~~~~~~lk~~ld~~~~~~~~~~l~~K~~~~~~t~g~~ 120 (200)
T 2a5l_A 66 LEDLKNCAGLALGSPT---R--------FGNMASPLKYFLDGTSSLWLTGSLVGKPAAVFTSTASL 120 (200)
T ss_dssp HHHHHTCSEEEEEEEC---B--------TTBCCHHHHHHHHTCHHHHHHTTTTTCEEEEEEEBSCS
T ss_pred HHHHHHCCEEEEEcCh---h--------ccCccHHHHHHHHHHHHHhhccccCCCEEEEEEecCCC
Confidence 3445689998877642 1 23456655677776542 146777766666654
No 79
>3dz8_A RAS-related protein RAB-3B; GDP, GTPase, structural genomics consortium, SGC, cell GTP-binding, lipoprotein, membrane, methylation; HET: GDP; 1.90A {Homo sapiens} SCOP: c.37.1.8
Probab=25.63 E-value=1.5e+02 Score=22.06 Aligned_cols=16 Identities=6% Similarity=-0.060 Sum_probs=12.1
Q ss_pred HHHHhCCCCEEEEEee
Q 039625 169 AAKAAGTADVVVMVVG 184 (238)
Q Consensus 169 a~~~a~~aD~vIv~~g 184 (238)
.....+.+|++|++.-
T Consensus 89 ~~~~~~~~d~~i~v~d 104 (191)
T 3dz8_A 89 TTAYYRGAMGFILMYD 104 (191)
T ss_dssp HHHHHTTCCEEEEEEE
T ss_pred HHHHHccCCEEEEEEE
Confidence 3445789999999885
No 80
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=25.52 E-value=1.4e+02 Score=23.65 Aligned_cols=38 Identities=16% Similarity=0.136 Sum_probs=19.3
Q ss_pred CCCCCcEEEEccCCCchhhhHHHHHHHHHhCC--CCEEEE
Q 039625 144 SNNTKNLAVIGSNANATNRRLLIEQAAKAAGT--ADVVVM 181 (238)
Q Consensus 144 ~~~~~~i~viG~~a~~~~~~~~~~~a~~~a~~--aD~vIv 181 (238)
.++..+|+++-|...++.....+..+.+.+++ .++.++
T Consensus 5 ~~~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~ 44 (277)
T 3cs3_A 5 RRQTNIIGVYLADYGGSFYGELLEGIKKGLALFDYEMIVC 44 (277)
T ss_dssp CCCCCEEEEEECSSCTTTHHHHHHHHHHHHHTTTCEEEEE
T ss_pred ccCCcEEEEEecCCCChhHHHHHHHHHHHHHHCCCeEEEE
Confidence 33447899988765544433333333333433 444443
No 81
>3ndc_A Precorrin-4 C(11)-methyltransferase; SAH; HET: SAH; 2.00A {Rhodobacter capsulatus} PDB: 3nei_A
Probab=25.25 E-value=46 Score=27.56 Aligned_cols=32 Identities=16% Similarity=0.297 Sum_probs=22.3
Q ss_pred CcEEEEccCCCchhhhHHHHHHHHHhCCCCEEEE
Q 039625 148 KNLAVIGSNANATNRRLLIEQAAKAAGTADVVVM 181 (238)
Q Consensus 148 ~~i~viG~~a~~~~~~~~~~~a~~~a~~aD~vIv 181 (238)
.+|.++|-...++. ...-+|++.+++||+|+.
T Consensus 4 m~l~iVG~GpG~~~--lLT~~A~~~L~~AdvV~~ 35 (264)
T 3ndc_A 4 MTVHFIGAGPGAAD--LITIRGRDLIASCPVCLY 35 (264)
T ss_dssp CCEEEEECBSSCGG--GSBHHHHHHHHHCSEEEE
T ss_pred cEEEEEEcCCCChH--HHHHHHHHHHHcCCEEEE
Confidence 57888886654432 233578888899999875
No 82
>1mky_A Probable GTP-binding protein ENGA; GTPase, DER, KH-domain, tandem G-domains, ligand binding protein; HET: GDP; 1.90A {Thermotoga maritima} SCOP: c.37.1.8 c.37.1.8 d.52.5.1
Probab=25.21 E-value=1.8e+02 Score=25.50 Aligned_cols=46 Identities=24% Similarity=0.207 Sum_probs=27.4
Q ss_pred HHHHHHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHHHHHHHhhCCCceEEEEe
Q 039625 167 EQAAKAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKLVMEVANATKGTMILVVM 225 (238)
Q Consensus 167 ~~a~~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~li~~l~~~~~~~vVvV~~ 225 (238)
..+....++||++|+++-... .+.....++.+.+.. .++|+|+|++
T Consensus 73 ~~~~~~~~~ad~il~V~D~~~------------~~~~~d~~i~~~l~~-~~~p~ilv~N 118 (439)
T 1mky_A 73 EVTLNMIREADLVLFVVDGKR------------GITKEDESLADFLRK-STVDTILVAN 118 (439)
T ss_dssp HHHHHHHTTCSEEEEEEETTT------------CCCHHHHHHHHHHHH-HTCCEEEEEE
T ss_pred HHHHHHHHhCCEEEEEEECCC------------CCCHHHHHHHHHHHH-cCCCEEEEEe
Confidence 345567899999999984211 122223344444443 4688887776
No 83
>2g5g_X Putative lipoprotein; cofacial heme, tyrosine ligand, dimer, transport protein; HET: HEM; 1.90A {Campylobacter jejuni subsp} SCOP: c.150.1.1
Probab=25.13 E-value=82 Score=26.36 Aligned_cols=49 Identities=14% Similarity=0.105 Sum_probs=29.6
Q ss_pred HHHHHHHHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHHHHHHHh---hCCCceEEEE
Q 039625 165 LIEQAAKAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKLVMEVAN---ATKGTMILVV 224 (238)
Q Consensus 165 ~~~~a~~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~li~~l~~---~~~~~vVvV~ 224 (238)
..++.++.++.+|+|+ +|+.+ |.. .-.-.|.++|++|.+ +.+.++++++
T Consensus 31 s~~~l~~~l~~advVl--lGE~H-------dnp--~hh~~Q~~li~~L~~~l~~~~~~~al~l 82 (268)
T 2g5g_X 31 SFEDMILELLKADVIL--LGEKH-------DEV--KHKISQVMIFNALEGNLSSQNINFDVAL 82 (268)
T ss_dssp CHHHHHHHHTTCSEEE--EEECT-------TCH--HHHHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CHHHHHHHhhcCCEEE--ECCCC-------CCH--HHHHHHHHHHHHHHHHHhhcCCCCEEEE
Confidence 3677888889999877 55432 211 212346678988862 2455565443
No 84
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=24.76 E-value=12 Score=32.07 Aligned_cols=55 Identities=29% Similarity=0.329 Sum_probs=29.3
Q ss_pred hCCCCEEEEEeeCCCCccccCCCCCCCCCCH--HHHHHHHHHHhhCCCceEEEEecCceeec
Q 039625 173 AGTADVVVMVVGLDQSIEAEGLDKENLTLHG--YQEKLVMEVANATKGTMILVVMAAGNVDV 232 (238)
Q Consensus 173 a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~--~q~~li~~l~~~~~~~vVvV~~~g~P~~l 232 (238)
.++||+||++.|.+. .+|..|.++..-. -=.++++.+.+.+++ .++++ ..+|+++
T Consensus 65 ~~~aD~Vii~ag~~~---~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~-a~iiv-~tNPv~~ 121 (310)
T 2xxj_A 65 LEGARAVVLAAGVAQ---RPGETRLQLLDRNAQVFAQVVPRVLEAAPE-AVLLV-ATNPVDV 121 (310)
T ss_dssp GTTEEEEEECCCCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHHCTT-CEEEE-CSSSHHH
T ss_pred hCCCCEEEECCCCCC---CCCcCHHHHHHhhHHHHHHHHHHHHHHCCC-cEEEE-ecCchHH
Confidence 679999999998543 2344443221110 012344455554444 44344 4899865
No 85
>2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, STR genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3
Probab=24.75 E-value=2.4e+02 Score=23.26 Aligned_cols=62 Identities=24% Similarity=0.213 Sum_probs=29.3
Q ss_pred HHHHHHHHh-CCCCEEEEEeeCCCCccccCCCCCCCCC-C-HH-----------HHHHHHHHHhhCCCceEEEEecCce
Q 039625 165 LIEQAAKAA-GTADVVVMVVGLDQSIEAEGLDKENLTL-H-GY-----------QEKLVMEVANATKGTMILVVMAAGN 229 (238)
Q Consensus 165 ~~~~a~~~a-~~aD~vIv~~g~~~~~~~eg~Dr~~l~l-~-~~-----------q~~li~~l~~~~~~~vVvV~~~g~P 229 (238)
.+.+++..+ .+.+++||..|....+ +-|.|...+.- + .. -.+++..+.. .+||||..++ |..
T Consensus 57 ~L~~al~~~~~d~~v~vVltg~g~~F-caG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~kPvIAav~-G~a 132 (280)
T 2f6q_A 57 EIMRALKAASKDDSIITVLTGNGDYY-SSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFID-FPKPLIAVVN-GPA 132 (280)
T ss_dssp HHHHHHHHHHHSSCSEEEEEESTTCS-BCCBCC----CCCTTHHHHHHHHHHHHHHHHHHHHHS-CCSCEEEEEC-SCE
T ss_pred HHHHHHHHHhhCCCEEEEEeCCCCCc-ccCCCHHHHhhcCcchhhHHHHHHHHHHHHHHHHHHc-CCCCEEEEEC-Cee
Confidence 344555443 2344455555654333 33556554321 1 11 1234556654 7899987775 544
No 86
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=24.60 E-value=1.1e+02 Score=27.13 Aligned_cols=55 Identities=15% Similarity=0.148 Sum_probs=38.2
Q ss_pred HHHHHHHHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHHHHHHHh-----------hCCCceEEEEecCcee
Q 039625 165 LIEQAAKAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKLVMEVAN-----------ATKGTMILVVMAAGNV 230 (238)
Q Consensus 165 ~~~~a~~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~li~~l~~-----------~~~~~vVvV~~~g~P~ 230 (238)
.+.+..+....||.+|+..=. -.+.+|.-=..+|+.+.. -.+|++++++.+|+|.
T Consensus 282 d~~~~~~~l~~aD~iv~~~P~-----------yw~~~Pa~lK~~iDrv~~~g~~y~~~~~~l~gK~~~~~~t~g~~~ 347 (413)
T 3l9w_A 282 DIAAEQEALSRADLIVWQHPM-----------QWYSIPPLLKLWIDKVFSHGWAYGHGGTALHGKHLLWAVTTGGGE 347 (413)
T ss_dssp CHHHHHHHHHTCSEEEEEEEC-----------BTTBCCHHHHHHHHHHSCBTTTBSTTCCTTTTCEEEEEEECSSCG
T ss_pred HHHHHHHHHHhCCEEEEECch-----------hhccCCHHHHHHHHHHHhcCceecCCCCccccceEEEEEeCCCCh
Confidence 345666778889998877521 256778777778887731 2368888888888874
No 87
>1jwy_B Dynamin A GTPase domain; dynamin, GTPase, GDP, myosin, fusion-protein, hydrolase; HET: BGC ADP GDP; 2.30A {Dictyostelium discoideum} SCOP: c.37.1.8 PDB: 1jx2_B*
Probab=24.46 E-value=64 Score=26.60 Aligned_cols=47 Identities=15% Similarity=0.114 Sum_probs=27.3
Q ss_pred HHHHHHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHH-HHHHHHHHhhCCCceEEEEe
Q 039625 167 EQAAKAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQ-EKLVMEVANATKGTMILVVM 225 (238)
Q Consensus 167 ~~a~~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q-~~li~~l~~~~~~~vVvV~~ 225 (238)
..+....+.+|++|+++-... -.+...+ .++++.+.. .++|+|+|++
T Consensus 159 ~~~~~~~~~~d~iilvvd~~~-----------~~~~~~~~~~i~~~~~~-~~~~~i~v~N 206 (315)
T 1jwy_B 159 RMVMAYIKKQNAIIVAVTPAN-----------TDLANSDALQLAKEVDP-EGKRTIGVIT 206 (315)
T ss_dssp HHHHHHHHSTTEEEEEEEESS-----------SCSTTCSHHHHHHHHCS-SCSSEEEEEE
T ss_pred HHHHHHHcCCCeEEEEEEecC-----------cchhhhHHHHHHHHhCC-CCCcEEEEEc
Confidence 445566789998888774210 0111112 356666654 5788888876
No 88
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=24.43 E-value=18 Score=30.88 Aligned_cols=54 Identities=22% Similarity=0.385 Sum_probs=30.1
Q ss_pred hCCCCEEEEEeeCCCCccccCCCCCCCCCCH--HHHHHHHHHHhhCCCceEEEEecCceeec
Q 039625 173 AGTADVVVMVVGLDQSIEAEGLDKENLTLHG--YQEKLVMEVANATKGTMILVVMAAGNVDV 232 (238)
Q Consensus 173 a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~--~q~~li~~l~~~~~~~vVvV~~~g~P~~l 232 (238)
.+++|+||.+.|.+. .+|.+|.++..-. .-.++++++.+.. + .++ ++..+|+++
T Consensus 72 l~gaD~Vi~~Ag~~~---~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~-~~v-lv~SNPv~~ 127 (313)
T 1hye_A 72 IDESDVVIITSGVPR---KEGMSRMDLAKTNAKIVGKYAKKIAEIC-D-TKI-FVITNPVDV 127 (313)
T ss_dssp GTTCSEEEECCSCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHHC-C-CEE-EECSSSHHH
T ss_pred hCCCCEEEECCCCCC---CCCCcHHHHHHHHHHHHHHHHHHHHHhC-C-eEE-EEecCcHHH
Confidence 679999999998542 3343433221111 1235666676644 4 443 345799864
No 89
>3k53_A Ferrous iron transport protein B; GTPase fold, helical bundle, G-protein, prokaryote, GTP-BIND nucleotide-binding, metal transport; 2.70A {Pyrococcus furiosus}
Probab=24.35 E-value=2.6e+02 Score=22.46 Aligned_cols=39 Identities=28% Similarity=0.292 Sum_probs=23.5
Q ss_pred HhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHHHHHHHhhCC-CceEEEEe
Q 039625 172 AAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKLVMEVANATK-GTMILVVM 225 (238)
Q Consensus 172 ~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~li~~l~~~~~-~~vVvV~~ 225 (238)
....+|++|+++-.. + ......++..+.. .+ .|+|+|++
T Consensus 78 ~~~~~d~vi~v~D~~-----------~---~~~~~~~~~~~~~-~~~~p~ilv~N 117 (271)
T 3k53_A 78 LDGNADVIVDIVDST-----------C---LMRNLFLTLELFE-MEVKNIILVLN 117 (271)
T ss_dssp HTTCCSEEEEEEEGG-----------G---HHHHHHHHHHHHH-TTCCSEEEEEE
T ss_pred hccCCcEEEEEecCC-----------c---chhhHHHHHHHHh-cCCCCEEEEEE
Confidence 347899999888422 1 1223445555655 45 78887765
No 90
>2o2z_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, NAD-binding protein; HET: NAD; 2.60A {Bacillus halodurans} PDB: 2hzb_A
Probab=24.34 E-value=40 Score=29.26 Aligned_cols=20 Identities=30% Similarity=0.305 Sum_probs=14.3
Q ss_pred HHHHHHhCCCCEEEEEeeCC
Q 039625 167 EQAAKAAGTADVVVMVVGLD 186 (238)
Q Consensus 167 ~~a~~~a~~aD~vIv~~g~~ 186 (238)
.+++++.++||+||+.-|+.
T Consensus 170 p~~l~AI~~AD~IvlgPGS~ 189 (323)
T 2o2z_A 170 REGLEAIRKADVIVIGPGSL 189 (323)
T ss_dssp HHHHHHHHHCSEEEECSSCT
T ss_pred HHHHHHHHhCCEEEECCCCC
Confidence 36777777888888776643
No 91
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=23.99 E-value=15 Score=31.52 Aligned_cols=55 Identities=16% Similarity=0.330 Sum_probs=27.8
Q ss_pred hCCCCEEEEEeeCCCCccccCCCCCCCCCCHH--HHHHHHHHHhhCCCceEEEEecCceeec
Q 039625 173 AGTADVVVMVVGLDQSIEAEGLDKENLTLHGY--QEKLVMEVANATKGTMILVVMAAGNVDV 232 (238)
Q Consensus 173 a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~--q~~li~~l~~~~~~~vVvV~~~g~P~~l 232 (238)
.++||+||+++|.+. .+|..|.++....- =.++++.+.+.+++ .++++ ..+|+++
T Consensus 72 ~~~aDvVii~~g~p~---k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~-a~viv-~tNPv~~ 128 (318)
T 1y6j_A 72 VKDCDVIVVTAGANR---KPGETRLDLAKKNVMIAKEVTQNIMKYYNH-GVILV-VSNPVDI 128 (318)
T ss_dssp GTTCSEEEECCCC---------CHHHHHHHHHHHHHHHHHHHHHHCCS-CEEEE-CSSSHHH
T ss_pred hCCCCEEEEcCCCCC---CCCcCHHHHHHhhHHHHHHHHHHHHHhCCC-cEEEE-ecCcHHH
Confidence 679999999998543 23333322211100 13455566654443 44444 5899864
No 92
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=23.84 E-value=71 Score=24.67 Aligned_cols=54 Identities=9% Similarity=0.160 Sum_probs=31.3
Q ss_pred HHHHHHHHHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHHHHHHHh--hCCCceEEEEecCc
Q 039625 164 LLIEQAAKAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKLVMEVAN--ATKGTMILVVMAAG 228 (238)
Q Consensus 164 ~~~~~a~~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~li~~l~~--~~~~~vVvV~~~g~ 228 (238)
..+.+..+...+||.+|++.-. + +..+|+.=..+++.+.. -.+||++++...|.
T Consensus 58 ~~~~~~~~~i~~aD~ii~~sP~---y--------~~~~p~~lK~~ld~l~~~~~~gK~~~~~~tgg~ 113 (197)
T 2vzf_A 58 AKLKEAVDATCNADGLIVATPI---Y--------KASYTGLLKAFLDILPQFALAGKAALPLATGGS 113 (197)
T ss_dssp HHHHHHHHHHHHCSEEEEEEEC---B--------TTBCCHHHHHHHTTSCTTTTTTCEEEEEEEESS
T ss_pred HHHHHHHHHHHHCCEEEEEeCc---c--------CCCCCHHHHHHHHhccccccCCCEEEEEEECCC
Confidence 3456667777889999887642 1 23456554556655431 13566665555443
No 93
>4dcu_A GTP-binding protein ENGA; GTPase, GDP, protein binding, hydrolase; HET: GDP; 2.00A {Bacillus subtilis} PDB: 4dct_A* 4dcs_A* 4dcv_A* 2hjg_A*
Probab=23.80 E-value=1.4e+02 Score=26.50 Aligned_cols=46 Identities=26% Similarity=0.287 Sum_probs=29.0
Q ss_pred HHHHHHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHHHHHHHhhCCCceEEEEe
Q 039625 167 EQAAKAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKLVMEVANATKGTMILVVM 225 (238)
Q Consensus 167 ~~a~~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~li~~l~~~~~~~vVvV~~ 225 (238)
..+....+.+|++|+++-.. -.+.....++.+.+.. .++|+|+|++
T Consensus 94 ~~~~~~~~~ad~il~VvD~~------------~~~~~~d~~l~~~l~~-~~~pvilV~N 139 (456)
T 4dcu_A 94 QQAEIAMDEADVIIFMVNGR------------EGVTAADEEVAKILYR-TKKPVVLAVN 139 (456)
T ss_dssp HHHHHHHHHCSEEEEEEESS------------SCSCHHHHHHHHHHTT-CCSCEEEEEE
T ss_pred HHHHhhHhhCCEEEEEEeCC------------CCCChHHHHHHHHHHH-cCCCEEEEEE
Confidence 34455667899999987421 1233444556666654 6789988776
No 94
>1ve2_A Uroporphyrin-III C-methyltransferase; heme, biosynthesis, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: c.90.1.1
Probab=23.61 E-value=1.8e+02 Score=23.04 Aligned_cols=32 Identities=19% Similarity=0.278 Sum_probs=22.3
Q ss_pred CcEEEEccCCCchhhhHHHHHHHHHhCCCCEEEE
Q 039625 148 KNLAVIGSNANATNRRLLIEQAAKAAGTADVVVM 181 (238)
Q Consensus 148 ~~i~viG~~a~~~~~~~~~~~a~~~a~~aD~vIv 181 (238)
.+|.++|-...++. ...-+|++..++||+++.
T Consensus 3 g~l~vVG~GpG~~~--~LT~~A~~~L~~advv~~ 34 (235)
T 1ve2_A 3 GKVYLVGAGFGGPE--HLTLKALRVLEVAEVVLH 34 (235)
T ss_dssp CEEEEEECBSSSGG--GSBHHHHHHHHHCSEEEE
T ss_pred cEEEEEeeCCCCHH--HHHHHHHHHHHhCCEEEE
Confidence 47888886654432 223578888899999885
No 95
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=23.59 E-value=12 Score=32.31 Aligned_cols=55 Identities=29% Similarity=0.373 Sum_probs=27.1
Q ss_pred hCCCCEEEEEeeCCCCccccCCCCCCCCCCH--HHHHHHHHHHhhCCCceEEEEecCceeec
Q 039625 173 AGTADVVVMVVGLDQSIEAEGLDKENLTLHG--YQEKLVMEVANATKGTMILVVMAAGNVDV 232 (238)
Q Consensus 173 a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~--~q~~li~~l~~~~~~~vVvV~~~g~P~~l 232 (238)
.++||+||++.|.+. .+|.+|.++-.-. -=.++++.+.+.+++ .++++ ..+|+++
T Consensus 74 ~~~aDvVii~ag~~~---k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~-a~iiv-~tNPv~~ 130 (326)
T 2zqz_A 74 AKDADLVVITAGAPQ---KPGETRLDLVNKNLKILKSIVDPIVDSGFN-GIFLV-AANPVDI 130 (326)
T ss_dssp GGGCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHHHHHHTCC-SEEEE-CSSSHHH
T ss_pred hCCCCEEEEcCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHCCC-eEEEE-eCCcHHH
Confidence 569999999998542 2344443221100 012334445544444 44344 4899865
No 96
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=23.33 E-value=41 Score=28.28 Aligned_cols=58 Identities=21% Similarity=0.139 Sum_probs=27.4
Q ss_pred hCCCCEEEEEeeCCCCc-cccCCCCCCCCCCHH--HHHHHHHHHhhCCCceEEEEecCceeec
Q 039625 173 AGTADVVVMVVGLDQSI-EAEGLDKENLTLHGY--QEKLVMEVANATKGTMILVVMAAGNVDV 232 (238)
Q Consensus 173 a~~aD~vIv~~g~~~~~-~~eg~Dr~~l~l~~~--q~~li~~l~~~~~~~vVvV~~~g~P~~l 232 (238)
++++|+||++++.+..+ ..+|..|.++....- =.++++.+.+..+ +.++++ ..+|+++
T Consensus 67 ~~~aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~-~~~ii~-~tNp~~~ 127 (309)
T 1hyh_A 67 LADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGF-HGVLVV-ISNPVDV 127 (309)
T ss_dssp GTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTC-CSEEEE-CSSSHHH
T ss_pred hCCCCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC-CcEEEE-EcCcHHH
Confidence 57999999999853210 003434433222111 1245556655343 344344 5788764
No 97
>3i8s_A Ferrous iron transport protein B; GTPase, GPCR, iron uptake, FEO, cell inner membrane, cell ME GTP-binding, ION transport, membrane; 1.80A {Escherichia coli} PDB: 3i8x_A* 3i92_A* 3hyr_A 3hyt_A* 2wic_A* 2wib_A* 2wia_A*
Probab=23.17 E-value=1.3e+02 Score=24.54 Aligned_cols=40 Identities=20% Similarity=0.211 Sum_probs=26.4
Q ss_pred HHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHHHHHHHhhCCCceEEEEe
Q 039625 171 KAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKLVMEVANATKGTMILVVM 225 (238)
Q Consensus 171 ~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~li~~l~~~~~~~vVvV~~ 225 (238)
.....+|++|+++-.. + +.....++..+.+ .+.|+|+|++
T Consensus 81 ~~~~~~d~ii~VvD~~-----------~---~~~~~~~~~~l~~-~~~p~ivv~N 120 (274)
T 3i8s_A 81 ILSGDADLLINVVDAS-----------N---LERNLYLTLQLLE-LGIPCIVALN 120 (274)
T ss_dssp HHHTCCSEEEEEEEGG-----------G---HHHHHHHHHHHHH-HTCCEEEEEE
T ss_pred HhhcCCCEEEEEecCC-----------C---hHHHHHHHHHHHh-cCCCEEEEEE
Confidence 3457999999988522 1 2234456666665 5788888776
No 98
>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus}
Probab=22.73 E-value=1.9e+02 Score=23.46 Aligned_cols=21 Identities=5% Similarity=0.145 Sum_probs=14.4
Q ss_pred HHHHHHHhhCCCceEEEEecCce
Q 039625 207 KLVMEVANATKGTMILVVMAAGN 229 (238)
Q Consensus 207 ~li~~l~~~~~~~vVvV~~~g~P 229 (238)
+++..+.. ++||||..++ |..
T Consensus 85 ~~~~~l~~-~~kPvIAav~-G~a 105 (257)
T 2ej5_A 85 PMMKALHH-LEKPVVAAVN-GAA 105 (257)
T ss_dssp HHHHHHHH-CCSCEEEEEC-SEE
T ss_pred HHHHHHHh-CCCCEEEEEC-ccc
Confidence 45667765 7899987765 543
No 99
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=22.71 E-value=32 Score=29.16 Aligned_cols=55 Identities=16% Similarity=0.267 Sum_probs=32.0
Q ss_pred HhCCCCEEEEEeeCCCCccccCCCCCCCCCCHH---HHHHHHHHHhhCCCceEEEEecCceeec
Q 039625 172 AAGTADVVVMVVGLDQSIEAEGLDKENLTLHGY---QEKLVMEVANATKGTMILVVMAAGNVDV 232 (238)
Q Consensus 172 ~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~---q~~li~~l~~~~~~~vVvV~~~g~P~~l 232 (238)
..+++|+||+++|.+. .+|..|.++- +.+ -.++++++.+.++ ..++++ ..+|.++
T Consensus 69 a~~~aDiVi~avg~p~---~~g~~r~d~~-~~~~~i~~~i~~~i~~~~~-~~iii~-~sNp~~~ 126 (317)
T 2ewd_A 69 DISGSDVVIITASIPG---RPKDDRSELL-FGNARILDSVAEGVKKYCP-NAFVIC-ITNPLDV 126 (317)
T ss_dssp GGTTCSEEEECCCCSS---CCSSCGGGGH-HHHHHHHHHHHHHHHHHCT-TSEEEE-CCSSHHH
T ss_pred HhCCCCEEEEeCCCCC---CCCCcHHHHH-HhhHHHHHHHHHHHHHHCC-CcEEEE-eCChHHH
Confidence 3579999999998553 3344554332 221 2356666766554 455444 4678654
No 100
>3sb2_A Protein HFQ; SM-like, RNA chaperone, chaperone; 2.63A {Herbaspirillum seropedicae} SCOP: b.38.1.2
Probab=22.65 E-value=83 Score=21.41 Aligned_cols=32 Identities=6% Similarity=0.119 Sum_probs=24.0
Q ss_pred HHHHHHHHHhhCCCceEEEEecCceee--cCCCcC
Q 039625 205 QEKLVMEVANATKGTMILVVMAAGNVD--VSFCKD 237 (238)
Q Consensus 205 q~~li~~l~~~~~~~vVvV~~~g~P~~--l~~~~~ 237 (238)
|+.++..+.+ ...||.+.+..|-.+. +.|.|+
T Consensus 9 Qd~fLn~lrk-~k~~VtI~LvnG~~L~G~I~~fD~ 42 (79)
T 3sb2_A 9 QDPFLNALRK-EHVPVSIYLVNGIKLQGHVESFDQ 42 (79)
T ss_dssp HHHHHHHHHH-TTCCEEEEETTSCEEEEEEEEECS
T ss_pred HHHHHHHHHh-cCCeEEEEEeCCCEEEEEEEEECC
Confidence 8899999987 5678988888887763 345443
No 101
>2ylb_A Protein HFQ; RNA-binding protein, LSM protein, RNA chaperone; 1.15A {Salmonella enterica subsp} PDB: 2yht_A 1hk9_A 2ylc_A* 3gib_A* 3rer_A* 3qo3_A* 3res_A*
Probab=22.19 E-value=68 Score=21.52 Aligned_cols=32 Identities=3% Similarity=0.132 Sum_probs=23.7
Q ss_pred HHHHHHHHHhhCCCceEEEEecCceee--cCCCcC
Q 039625 205 QEKLVMEVANATKGTMILVVMAAGNVD--VSFCKD 237 (238)
Q Consensus 205 q~~li~~l~~~~~~~vVvV~~~g~P~~--l~~~~~ 237 (238)
|+.+++.+.+ .+.||.+.+..|-++. +.|-|+
T Consensus 10 Qd~~L~~lrk-~k~~Vti~L~nG~~l~G~I~~fD~ 43 (74)
T 2ylb_A 10 QDPFLNALRR-ERVPVSIYLVNGIKLQGQIESFDQ 43 (74)
T ss_dssp HHHHHHHHHH-HTCCEEEEETTSCEEEEEEEEECS
T ss_pred HHHHHHHHHh-cCCcEEEEEeCCCEEEEEEEEECC
Confidence 8899999987 4678888888887763 355443
No 102
>3iev_A GTP-binding protein ERA; ERA, GTPase, KH domain, anti-SD, 16S rRNA, 30S ribosome ASSE GTP-binding, nucleotide-binding; HET: GNP; 1.90A {Aquifex aeolicus} PDB: 3r9w_A* 3r9x_A*
Probab=22.14 E-value=1.5e+02 Score=24.67 Aligned_cols=46 Identities=17% Similarity=0.254 Sum_probs=28.2
Q ss_pred HHHHHHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHH-HHHHHhhCCCceEEEEe
Q 039625 167 EQAAKAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKL-VMEVANATKGTMILVVM 225 (238)
Q Consensus 167 ~~a~~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~l-i~~l~~~~~~~vVvV~~ 225 (238)
..+...++.+|++|+++-... ........+ ++.+.. .+.|+|+|++
T Consensus 84 ~~~~~~l~~aD~il~VvD~~~------------~~~~~~~~~~~~~l~~-~~~pvilV~N 130 (308)
T 3iev_A 84 EIAKQSLEEADVILFMIDATE------------GWRPRDEEIYQNFIKP-LNKPVIVVIN 130 (308)
T ss_dssp HHHHHHHHHCSEEEEEEETTT------------BSCHHHHHHHHHHTGG-GCCCEEEEEE
T ss_pred HHHHHHhhcCCEEEEEEeCCC------------CCCchhHHHHHHHHHh-cCCCEEEEEE
Confidence 445566789999999985321 112233444 555554 5678887776
No 103
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=21.80 E-value=1.4e+02 Score=20.16 Aligned_cols=20 Identities=15% Similarity=0.194 Sum_probs=12.9
Q ss_pred HHHHHHHHHhhCCCceEEEE
Q 039625 205 QEKLVMEVANATKGTMILVV 224 (238)
Q Consensus 205 q~~li~~l~~~~~~~vVvV~ 224 (238)
..++++.+.+..+.|+|++.
T Consensus 61 g~~~~~~lr~~~~~~ii~~t 80 (120)
T 3f6p_A 61 GVEVCREVRKKYDMPIIMLT 80 (120)
T ss_dssp HHHHHHHHHTTCCSCEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEE
Confidence 46788888764556665444
No 104
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=21.80 E-value=33 Score=29.34 Aligned_cols=54 Identities=20% Similarity=0.371 Sum_probs=29.4
Q ss_pred HhCCCCEEEEEeeCCCCccccCCC-----CCCCCCCHHH----HHHHHHHHhhCCCceEEEEecCceeec
Q 039625 172 AAGTADVVVMVVGLDQSIEAEGLD-----KENLTLHGYQ----EKLVMEVANATKGTMILVVMAAGNVDV 232 (238)
Q Consensus 172 ~a~~aD~vIv~~g~~~~~~~eg~D-----r~~l~l~~~q----~~li~~l~~~~~~~vVvV~~~g~P~~l 232 (238)
..++||+||+++|.+.. +|.+ |.++ -... .++.+++.+.++ ..++++ ..+|.++
T Consensus 69 al~~aD~Vi~a~g~p~k---~g~~~qe~~r~dl--~~~n~~i~~~i~~~i~~~~p-~a~iiv-~tNP~~~ 131 (322)
T 1t2d_A 69 DLAGADVVIVTAGFTKA---PGKSDKEWNRDDL--LPLNNKIMIEIGGHIKKNCP-NAFIIV-VTNPVDV 131 (322)
T ss_dssp GGTTCSEEEECCSCSSC---TTCCSTTCCGGGG--HHHHHHHHHHHHHHHHHHCT-TSEEEE-CSSSHHH
T ss_pred HhCCCCEEEEeCCCCCC---CCCCcccccHHHH--HHHHHHHHHHHHHHHHHHCC-CeEEEE-ecCChHH
Confidence 36799999999985532 2222 3222 1112 234555555454 355444 4788764
No 105
>3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} PDB: 4hc8_A*
Probab=21.80 E-value=59 Score=26.26 Aligned_cols=21 Identities=5% Similarity=0.132 Sum_probs=14.6
Q ss_pred HHHHHHHhhCCCceEEEEecCce
Q 039625 207 KLVMEVANATKGTMILVVMAAGN 229 (238)
Q Consensus 207 ~li~~l~~~~~~~vVvV~~~g~P 229 (238)
+++..+.. .+||||..++ |..
T Consensus 86 ~~~~~l~~-~~kPvIAav~-G~a 106 (233)
T 3r6h_A 86 ELSYRLLS-YPKPVVIACT-GHA 106 (233)
T ss_dssp HHHHHHHT-CSSCEEEEEC-SEE
T ss_pred HHHHHHHh-CCCCEEEEEC-Ccc
Confidence 45666765 7899987775 544
No 106
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=21.80 E-value=33 Score=25.48 Aligned_cols=12 Identities=25% Similarity=0.720 Sum_probs=9.1
Q ss_pred CcEEEEccCCCc
Q 039625 148 KNLAVIGSNANA 159 (238)
Q Consensus 148 ~~i~viG~~a~~ 159 (238)
++|+|+|-..+.
T Consensus 15 ~~IavIGaS~~~ 26 (138)
T 1y81_A 15 RKIALVGASKNP 26 (138)
T ss_dssp CEEEEETCCSCT
T ss_pred CeEEEEeecCCC
Confidence 789999975543
No 107
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=21.50 E-value=22 Score=30.10 Aligned_cols=55 Identities=20% Similarity=0.332 Sum_probs=29.4
Q ss_pred hCCCCEEEEEeeCCCCccccCCCCCCCCCC--HHHHHHHHHHHhhCCCceEEEEecCceeec
Q 039625 173 AGTADVVVMVVGLDQSIEAEGLDKENLTLH--GYQEKLVMEVANATKGTMILVVMAAGNVDV 232 (238)
Q Consensus 173 a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~--~~q~~li~~l~~~~~~~vVvV~~~g~P~~l 232 (238)
.+++|+||.+.|.+. .+|..|.++..- ..-.++++++.+.+++ .+ |++..+|+++
T Consensus 68 ~~~aDvVi~~ag~~~---~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~-~~-viv~SNPv~~ 124 (303)
T 1o6z_A 68 TAGSDVVVITAGIPR---QPGQTRIDLAGDNAPIMEDIQSSLDEHNDD-YI-SLTTSNPVDL 124 (303)
T ss_dssp GTTCSEEEECCCCCC---CTTCCHHHHHHHHHHHHHHHHHHHHTTCSC-CE-EEECCSSHHH
T ss_pred hCCCCEEEEcCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHCCC-cE-EEEeCChHHH
Confidence 679999999998542 233333221100 1123455666654433 43 3446899864
No 108
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=21.30 E-value=1.7e+02 Score=26.16 Aligned_cols=32 Identities=22% Similarity=0.395 Sum_probs=23.1
Q ss_pred CcEEEEccCCCchhhhHHHHHHHHHhCCCCEEEE
Q 039625 148 KNLAVIGSNANATNRRLLIEQAAKAAGTADVVVM 181 (238)
Q Consensus 148 ~~i~viG~~a~~~~~~~~~~~a~~~a~~aD~vIv 181 (238)
.+|.++|-...++. ...-++++..++||+|+.
T Consensus 216 g~l~lVG~GpGd~~--lLTlrA~~~L~~ADvV~~ 247 (457)
T 1pjq_A 216 GEVVLVGAGPGDAG--LLTLKGLQQIQQADIVVY 247 (457)
T ss_dssp CEEEEEECBSSCGG--GSBHHHHHHHHHCSEEEE
T ss_pred cEEEEEeCCCCChH--HccHHHHHHHHhCCEEEE
Confidence 68999987655432 223578888899999885
No 109
>3iby_A Ferrous iron transport protein B; G protein, G domain, iron uptake, cell inner membrane, cell GTP-binding, ION transport, membrane; 2.50A {Legionella pneumophila}
Probab=21.26 E-value=1.4e+02 Score=24.14 Aligned_cols=38 Identities=8% Similarity=0.041 Sum_probs=25.1
Q ss_pred hCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHHHHHHHhhCCCceEEEEe
Q 039625 173 AGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKLVMEVANATKGTMILVVM 225 (238)
Q Consensus 173 a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~li~~l~~~~~~~vVvV~~ 225 (238)
...+|++|+++-.. + +.....+...+.+ .+.|+|+|++
T Consensus 81 ~~~~d~vi~VvDas-----------~---~~~~~~l~~~l~~-~~~pvilv~N 118 (256)
T 3iby_A 81 DLEYDCIINVIDAC-----------H---LERHLYLTSQLFE-LGKPVVVALN 118 (256)
T ss_dssp HSCCSEEEEEEEGG-----------G---HHHHHHHHHHHTT-SCSCEEEEEE
T ss_pred hCCCCEEEEEeeCC-----------C---chhHHHHHHHHHH-cCCCEEEEEE
Confidence 48999999998522 1 2233456666665 6788887776
No 110
>2hjg_A GTP-binding protein ENGA; GTPase ENGA KH-domain, hydrolase; HET: GDP; 2.50A {Bacillus subtilis}
Probab=21.20 E-value=1.4e+02 Score=26.21 Aligned_cols=45 Identities=27% Similarity=0.321 Sum_probs=26.6
Q ss_pred HHHHHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHHHHHHHhhCCCceEEEEe
Q 039625 168 QAAKAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKLVMEVANATKGTMILVVM 225 (238)
Q Consensus 168 ~a~~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~li~~l~~~~~~~vVvV~~ 225 (238)
.+....++||++|+++-.. + .+.....++.+.+.. .++|+|+|++
T Consensus 75 ~~~~~~~~ad~il~vvD~~--------~----~~~~~d~~~~~~l~~-~~~pvilv~N 119 (436)
T 2hjg_A 75 QAEIAMDEADVIIFMVNGR--------E----GVTAADEEVAKILYR-TKKPVVLAVN 119 (436)
T ss_dssp HHHHHHHHCSEEEEEEETT--------T----CSCHHHHHHHHHHTT-CCSCEEEEEE
T ss_pred HHHHHHHhCCEEEEEEeCC--------C----CCCHHHHHHHHHHHH-cCCCEEEEEE
Confidence 3445677899999887421 1 122333344444443 6789988776
No 111
>3s2y_A Chromate reductase; uranium reductase, oxidoreductase; HET: FMN PG4; 2.24A {Gluconacetobacter hansenii}
Probab=26.32 E-value=21 Score=28.32 Aligned_cols=56 Identities=21% Similarity=0.234 Sum_probs=32.2
Q ss_pred HHHHHHHHHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHHHHHHHh-----hCCCceEEEEecCcee
Q 039625 164 LLIEQAAKAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKLVMEVAN-----ATKGTMILVVMAAGNV 230 (238)
Q Consensus 164 ~~~~~a~~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~li~~l~~-----~~~~~vVvV~~~g~P~ 230 (238)
..+.+..+...+||.+|++.-. + +..+|+.=..+|+.+.. -.+||+.++..++++.
T Consensus 62 ~~~~~~~~~i~~AD~iIi~tP~--Y---------~~s~p~~lK~~iD~l~~~~~~~l~gK~v~~v~tsgg~~ 122 (199)
T 3s2y_A 62 APVLTMAQQIATADAVVIVTPE--Y---------NYSVPGVLKNAIDWLSRVSPQPLAGKPVALVTASPGMI 122 (199)
Confidence 3456677788899999877531 1 23344433444544432 2367777666565553
No 112
>3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics, PSI-2, protein structure initiative; 2.50A {Pseudomonas syringae PV}
Probab=20.82 E-value=30 Score=28.07 Aligned_cols=18 Identities=11% Similarity=0.080 Sum_probs=12.7
Q ss_pred HHHHHHHhhCCCceEEEEe
Q 039625 207 KLVMEVANATKGTMILVVM 225 (238)
Q Consensus 207 ~li~~l~~~~~~~vVvV~~ 225 (238)
+++..+.. ++||||..++
T Consensus 85 ~~~~~l~~-~~kPvIAav~ 102 (232)
T 3ot6_A 85 TLARRMLS-HPFPIIVACP 102 (232)
T ss_dssp HHHHHHHT-CSSCEEEECC
T ss_pred HHHHHHHc-CCCCEEEEEC
Confidence 45666665 7899987664
No 113
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=20.77 E-value=1e+02 Score=22.09 Aligned_cols=41 Identities=22% Similarity=0.154 Sum_probs=23.8
Q ss_pred HhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHHHHHHHhhCCCceEEEEe
Q 039625 172 AAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKLVMEVANATKGTMILVVM 225 (238)
Q Consensus 172 ~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~li~~l~~~~~~~vVvV~~ 225 (238)
..+.+|++|+.+|.... . ...+..-|+. |...+||+|.|-.
T Consensus 35 ~I~~~~~vIvL~G~~t~-----------~-s~wv~~EI~~-A~~~gkpIigV~~ 75 (111)
T 1eiw_A 35 TPEDADAVIVLAGLWGT-----------R-RDEILGAVDL-ARKSSKPIITVRP 75 (111)
T ss_dssp CSSSCSEEEEEGGGTTT-----------S-HHHHHHHHHH-HTTTTCCEEEECC
T ss_pred ccccCCEEEEEeCCCcC-----------C-ChHHHHHHHH-HHHcCCCEEEEEc
Confidence 35789999999985421 1 1223333433 3347899876543
No 114
>2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, fatty acid metabolism, transit peptide, lipid Met crontonase, mitochondrion, CAsp; 2.3A {Homo sapiens}
Probab=20.39 E-value=2.7e+02 Score=23.07 Aligned_cols=63 Identities=17% Similarity=0.179 Sum_probs=30.8
Q ss_pred HHHHHHHHHhCC-CC-EEEEEeeCCCCccccCCCCCCCCCC--HH--------HHHHHHHHHhhCCCceEEEEecCce
Q 039625 164 LLIEQAAKAAGT-AD-VVVMVVGLDQSIEAEGLDKENLTLH--GY--------QEKLVMEVANATKGTMILVVMAAGN 229 (238)
Q Consensus 164 ~~~~~a~~~a~~-aD-~vIv~~g~~~~~~~eg~Dr~~l~l~--~~--------q~~li~~l~~~~~~~vVvV~~~g~P 229 (238)
..+.+++..+.. .+ -+||..|....+ +-|.|...+.-. .. -.+++..+.. ++||||..++ |..
T Consensus 63 ~~L~~al~~~~~d~~vr~vVltg~g~~F-caG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~kPvIAav~-G~a 137 (287)
T 2vx2_A 63 KSLQSDILHDADSNDLKVIIISAEGPVF-SSGHDLKELTEEQGRDYHAEVFQTCSKVMMHIRN-HPVPVIAMVN-GLA 137 (287)
T ss_dssp HHHHHHHHTTTTCTTCCEEEEEESSSEE-ECCSCCC-CCGGGCHHHHHHHHHHHHHHHHHHHT-CSSCEEEEEC-SEE
T ss_pred HHHHHHHHHHHhCCCeEEEEEECCCCCc-cCCcCHHHHhcccchhHHHHHHHHHHHHHHHHHh-CCCCEEEEEC-CEE
Confidence 345555555432 22 344445543333 345566543211 11 1245556664 7899987775 543
No 115
>1kq1_A HFQ, HOST factor for Q beta; hexamer, RNA binding protein, translational regulator, SM motif; 1.55A {Staphylococcus aureus} SCOP: b.38.1.2 PDB: 1kq2_A
Probab=20.30 E-value=75 Score=21.49 Aligned_cols=32 Identities=6% Similarity=0.113 Sum_probs=23.3
Q ss_pred HHHHHHHHHHhhCCCceEEEEecCceee--cCCCc
Q 039625 204 YQEKLVMEVANATKGTMILVVMAAGNVD--VSFCK 236 (238)
Q Consensus 204 ~q~~li~~l~~~~~~~vVvV~~~g~P~~--l~~~~ 236 (238)
-|+.+++.+.+ .+.||.+.+.+|-.+. +.|.|
T Consensus 7 lQd~fLn~lrk-~k~~VtI~L~nG~~l~G~I~~fD 40 (77)
T 1kq1_A 7 IQDKALENFKA-NQTEVTVFFLNGFQMKGVIEEYD 40 (77)
T ss_dssp HHHHHHHHHHH-HTCEEEEEETTSCEEEEEEEEEC
T ss_pred cHHHHHHHHHh-cCCeEEEEEeCCCEEEEEEEEEC
Confidence 38899999987 5678888888777763 34544
No 116
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=20.16 E-value=1.4e+02 Score=20.76 Aligned_cols=54 Identities=17% Similarity=0.086 Sum_probs=30.8
Q ss_pred hHHHHHHHHHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHHHHHHHhhCCCceEE
Q 039625 163 RLLIEQAAKAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKLVMEVANATKGTMIL 222 (238)
Q Consensus 163 ~~~~~~a~~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~li~~l~~~~~~~vVv 222 (238)
...+++..+.+++.++.-+++|.+-.+.|....+. ..-.++.+.|.+. +.||+.
T Consensus 37 ~~~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~-----~~~~~f~~~L~~~-~lpV~~ 90 (98)
T 1iv0_A 37 EEDVEALLDFVRREGLGKLVVGLPLRTDLKESAQA-----GKVLPLVEALRAR-GVEVEL 90 (98)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECCCCCCSSSCCCS-----STTHHHHHHHHHT-TCEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEeeccCCCCCcCHHH-----HHHHHHHHHHhcC-CCCEEE
Confidence 34456666666666666677787755544332222 1234677777764 566643
No 117
>2qpt_A EH domain-containing protein-2; protein-nucleotide complex, membrane protein, endocytosis; HET: ANP; 3.10A {Mus musculus}
Probab=20.07 E-value=90 Score=28.79 Aligned_cols=45 Identities=9% Similarity=0.151 Sum_probs=27.6
Q ss_pred HHHHhCCCCEEEEEeeCCCCccccCCCCCCCCCCHHHHHHHHHHHhhCCCceEEEEe
Q 039625 169 AAKAAGTADVVVMVVGLDQSIEAEGLDKENLTLHGYQEKLVMEVANATKGTMILVVM 225 (238)
Q Consensus 169 a~~~a~~aD~vIv~~g~~~~~~~eg~Dr~~l~l~~~q~~li~~l~~~~~~~vVvV~~ 225 (238)
+...+..+|++|+++-.. +..+.....++++.+.. .+.|+|+|++
T Consensus 182 ~~~~l~~aD~il~VvDa~-----------~~~~~~~~~~~l~~l~~-~~~pvilVlN 226 (550)
T 2qpt_A 182 LRWFAERVDLIILLFDAH-----------KLEISDEFSEAIGALRG-HEDKIRVVLN 226 (550)
T ss_dssp HHHHHHHCSEEEEEEETT-----------SCCCCHHHHHHHHHTTT-CGGGEEEEEE
T ss_pred HHHHHHhCCEEEEEEeCC-----------cCCCCHHHHHHHHHHHh-cCCCEEEEEE
Confidence 344567899999988522 22233444566666654 4567877775
Done!